##maf version=1 scoring=roast.v3.3 a score=1365.000000 s hg38.chr19_GL949747v2_alt 0 1 + 729520 T s panTro4.chr19 58936492 1 + 63644993 T i panTro4.chr19 N 0 C 0 s rheMac3.chr19 59858196 1 + 64156825 T i rheMac3.chr19 N 0 C 0 s macFas5.chr19 54875173 1 + 59248254 T i macFas5.chr19 N 0 C 0 s papAnu2.chr19 46998026 1 + 51301725 T i papAnu2.chr19 N 0 C 0 s chlSab2.chr6 46710962 1 + 50890351 T i chlSab2.chr6 N 0 C 0 a score=37821.000000 s hg38.chr19_GL949747v2_alt 1 15 + 729520 GTCAGTTGCTTGGTG s panTro4.chr19 58936493 15 + 63644993 GTCAGTTGCTTGGTG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102564661 15 - 106955855 GTCAGTTGCTTGGTG i nomLeu3.chr10 N 0 C 0 s rheMac3.chr19 59858197 15 + 64156825 GTCAGTTGCTTGGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54875174 15 + 59248254 GTCAGTTGCTTGGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46998027 15 + 51301725 GTCAGTTGCTTGGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46710963 15 + 50890351 GTCAGTTGCTTGGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45281161 15 + 49145316 GTCATTTGCTTGATG i calJac3.chr22 N 0 C 0 a score=207591.000000 s hg38.chr19_GL949747v2_alt 16 86 + 729520 TGGTGAAGC--AATGAGAG--TGTTTTTTTCG-------GGGGAGGAGGTGTCAGATAGATCAAGAATTTATAATTAGCATAAGAAATGTACTTCTT s panTro4.chr19 58936508 86 + 63644993 TGGTGAAGC--AATGAGAG--TGTTTTTTTGG-------GGGGAGGAGGTGTCAGATAGATCAAGAATTTATAATTAGCATAAGAAATGTACTTCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55798183 66 + 60714840 TGGTGAAGC--AATGAGAG--TGTTTTTTTGA-------GGAGAGGAGGTGTCAGATAGATCAAGAATT--------------------TACTTCTT i ponAbe2.chr19 N 0 C 0 s nomLeu3.chr10 102564676 86 - 106955855 TGGTGAAGC--AATGAGAG--TGTTTTTTTGC-------GGGCAGGAGGTGTCGGATAGATCAAGAATTTATAATAAGCATAAGAAATGTACTTCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59858212 87 + 64156825 TGGTGAAGC--AATGAGAGG-TTTTTTTTCGG-------GGGGAGGAGGTGTcagatagatcaagaatttataataagcatcagaaatgtacttctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54875189 87 + 59248254 TGGTGAAGC--AATGAGAGG-TTTTTTTTGGG-------GGGGAGGAGGTGTCAGATAGATCAAGAATTTATAATAAGCATCAGAAATGTACTTCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46998042 87 + 51301725 TGGTGAAGC--AATGAGAGG-ttttttttGCG-------GGGGAGGAGGTGTCAGATAGTTCAAGAATTTATAATAAGCATCAGAAATGTACTTCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46710978 88 + 50890351 TGGTGAAGC--AATGAGAGGTTTTTTTTTGCG-------GGGGAGGAGGTGTCAGATAGTTCAAGAATTTATAATAAGCATCAGAAATGTACTTCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45281176 91 + 49145316 TGGTGAAGCCAAATGAGAG--TGATTTTTGGGGGGGGCTGGGGAGGAGGTGTCAGA----TCAGGAATTTAAAATAAACGTAAGAAATGTACTTCTT i calJac3.chr22 C 0 I 462 a score=5096.000000 s hg38.chr19_GL949747v2_alt 102 2 + 729520 AA s panTro4.chr19 58936594 2 + 63644993 AA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55798249 2 + 60714840 AA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102564762 2 - 106955855 AA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59858299 2 + 64156825 aa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54875276 2 + 59248254 AA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46998129 2 + 51301725 AA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46711066 2 + 50890351 AA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45281267 462 + 49145316 I a score=2656698.000000 s hg38.chr19_GL949747v2_alt 104 990 + 729520 CAAAGccagcctgggcaacatagtgagattcccatctct--acaaaa--aaaaaaaaaaaaaaa-----------ttagcccagtgt-ggtggtgcacacctgtggccccagctacttgggaggctgaggcaggaggattgcttgagcctgggaggtcaaggctgcagtgagctatgattgtgccactgcactccagtctgtgtgac-agtgcaagaccctgtctcaaaaaataaaaagaaaaaaaaagaaaCATACTAAAA-----AAGGACACATATTAGCAATATGAAACAAGAACAATTTTCCATAAAGCAAGAGGCTTATGGAAATAAAAAGTATAAAAATACATGATGGTAAA---AAATATATAACATTATCCTCTAACAGAATAGGCAGTAGGGTgggtgccgtggctcacgcctgtaatcccagcactttgagaggctgaggtgggatgatcacttgagaccaggagttcgagaccagtctgggcaacatggtgagaccgtgtctcttt-aaaaaaaaaaaaaaaaAAGGC---------------AGAATTGATACAGCTGAAG--AAAAATGAACAAGTAAGAAAATGTGGTGGAGGAACTTCTCCAGGAAGCTGATATAATTATATTAAGATCAGAAAAAAT---AAGAGAAAAGTCATCGTACGAT---------ATAAGGGACAGGTGTTTCTCAAAATCCAAAATCTTCTCTGCTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcgcccaggctagagtgcagtggtgcaatctcagctcactgcaaactccacctcccagattcaagtgattctcctgcctcagcctccccagtagct-ggattacaggtgctcgccaccacacccagctaatttttgaatttttagtagagacggggtttcaccatgttggtcaggctggtctcaaactcctgacctc--gtgattcgcccacctcagcctcccaaagtgctgggattacaggcctgagccaccgcacccagcc s panTro4.chr19 58936596 986 + 63644993 CAAAGccagcctgggcaacatagtgagattcccatctct--acaaaa--aaaaaaaaaaaaaaa-------aaaattagcccagtgt-ggttgtgcacacctgtggccccagctactcgggaggctgaggcaggaggattgcttgagcctgggaggtcaaggctgcagtgagctatgattgtgccactgcactccagtctgggtgac-agtgcaagaccctgtctcaaaaaataaaaagaaaaaaaaagaaaCATAcaaaaa-----aaggacacatattagcaatgtgaaacaagaacaattatccataaagcaagaggcttatggaaataaaaagtataaaaatacatgatggtaaa---aaatatataacattatcctctaacagaataggcagtagggtgggtgccgtggctcacgcctgtaatcccagcactttgagaggctgaggtgggatgatcacttgagaccaggagttcgagaccagtctgggcaacatggtgagaccgtgtctctt---------aaaaaaaaaaaggc---------------agaattgatacagctgaag--aaaaatgaacaagtaagaaaatgtggtggaggaacttctccaggaagctgatataattatattaacatcagaaaaaat---aagagaaaagccatcgtaagat---------ataagggacagCTGTTTCTCAAAATCCAAAATCTTCTCTGCTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcgccccggctggagtgcagtggtgcgatctcagctcactgcaaactccacctcccagattcaagcgattctcctgcctcagcctccccagtagct-ggattacaggtgctcgccaccacacccagctaatttttgaatttttagtagagacggggtttccccatgttggtcaggctggtctcaaactcctgacctc--gtgattcgcccacctcagcctcccaaagtgctgggattacaggcctgagccaccgcacccggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55798251 1006 + 60714840 AAAAGccagcctgggcaacatagtgagattcccatctct--actaaa--aaaaaaaaaaaagaaaaagaaaaaaattagcccagtgt-ggttgtgcacacctgtggccccagctactcgggaggctgaggcaggaggattgcttgagcctgggaggtcacggctgcagtgagctgtgattgtgccactgcactccagtctgggtgac-agtgcaagaccctgtctcaaaaaataaaaag-aaaaaaaagaaaCATACTAAAAAAGATAAGGACACATGTtaacaatgtgaagcaagaacaattatccataaagcaaggggcttatggaaataaaaagtataaaaatacatgatagtaaa---aaatatataacattatcctctaatacaataggcagtagggtgggtgccgtggctcacgcctgtaatcccagcactttgagaggctgaggtgggatgatcacttgagaccaggagttcaagaccagtctgggcaacatgatgagaccgtgtctcttt-aaaaaaaaaaaaaaaaaaggc------------agtagaattgatacagctgaagaaaaaaatgaacaagtgagaagatgtagtggaggaacttctccaggaagctgatcta-----attaatatcagaaaaaataagaagagaaaagccatcgtaagat---------gtaaggaacagCTGCTTCTCAAAATCCAAAATCTTCTCTACTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcgcccaggctagagtgcagtggtgcaatctcagctcactgcaaactccacctcccaaattcaagcgattctcctgcctcagcctccccagtagct-ggattacaggggctcgccaccacacccagctaatttttgaatttttagtaagagatgggtttcaccatgttggtcagg-tggtctc-aactcctgacctc--gtgaatcacccacctcagcctcccaaagtgctgggattacaggactgagccactgcacccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102564764 997 - 106955855 AAAAGccagcctgggcaacatagtgagattcccatctct--accaaa--aaaaaaaaa-----------------ttagcccagcgt-ggtggtgcacacctgtggccccagctactcgggaggctgaggcaggaggattgcttgagccagggaggtcaaggctgcagtgagctatgattgtgccactgcactccagtctgggtgac-agtgcaagaccctgtctcaaaaaataaaaag-aaaaaaaagaaaCatactaaaaaagataaggacacatgctagcaatgtgaagcaagaacaattatccataaagcaaggggcttctggaactaaaaagtataaaaatacacgatggttaa---aaatatataacattatcctctaacagaataggcagtagggtgggtgccatggctcacgcctataatcccagcagtttgagaggctgaggtgggatgatcacttcagaccaggagttcgagaccagtctgggcaacatggtgagaccgtgtgtcttt-aaaaaaaaaaaaaaaaaaggc---------------agaattgatacagctgaag--aaaaatgaacaagtaagaaaatgtggtggaggaacttctccaggaagctgatataattatattaacatcagaaaaaat---aagagaaaagccatcgtaagatatatataagataagagACAGCTGTTTCTCAAAAACCAAAATCTTCTCTGCTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcgcccaggctagagtgcagtggtgcaatctcagctcactgcaaactccacctcccagattcaagcgattcttctgcctcagcctccccagtagct-ggattacaggtgctcgccaccacacccagctaatttttgtatttttagtagagatggggtttcaccatgttggtcaggctggtctcaaattcctgacctg--gtgattcacccacctcagcctcccaaagtgctgggattacaggcctgagccaccacacccagcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59858301 984 + 64156825 aaaagccagcctgggcaacatggcgagattcccatttct--accaaa-----------aaaaaa-----------ttagcccagcgt-ggtggtgcacacatgtggccccagctacttgggaggctgaggcaggaggattgcttgagcctgggaggttaaggttgcagtgagctatgattgcgccactgcactccagtctgggtgac-agtgcaagaccctgtctcaaaaaataaaaag-----aaaataaacatactaaaaaagataaggacacatgttagcaatgtgaaacaa-aacaattatccataaagcaaggggcttatggaaataaaaagtataaaaa-atatgatggtaaa---atatatataacagtatcctctgatagaataggcagtagggtgggtgccgtggctcacgcctgtaatcccagcactttgagaggctcaggtgggacgatcccttgagaccaggaatttgagaccagtctgggcaacatggtgagactgtgtctcttt-aaaaaaaaaaaaaaaaaaggg-----------cagtagaattgatacagctgaag--aaaaatgaacaagtaagaagatgtggtggaggaacttttccaggaagctgatataattatattaatatcagaaagaat---aggagaaaagccatcgtaagat---------ataagggacagCTGTGTCTGAAAATCCAAACTCTTCTCTGCTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcacccaggctggagtgcagtggtacaatctcgactcatggcaaccttcacctcccagattcaagcgattctcctgcctcagcctcccaagtacctgggattataggcgctcgcaaccacacccaggtaatttttgaatttttagtacagacggggtttcaccatattggtcaggctggtctcaaactcctgacctt--gtgattcgcccacctcagcttcccaatgtgctgagattactggcatgagccaccacgcctggcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54875278 985 + 59248254 AAAAGccagcctgggcaacatagcgagattcccatttct--accaaa-----------aaaaaa-----------ttagcccagcgt-ggtggtgcacacatgtggccccagctacttgggaggctgaggcaggaggattgcttgagcctgggaggttaaggttgcagtgagctatgattgcgccactgcactccagtctgggtgac-agtgcaagaccctgtctcaaaaaataaaaag-----aaaataaaCatactaaaaaagataaggacacatgttagcaatgtgaaacaa-aacaattatccataaagcaagggtcttatggaaataaaaagtataaaaa-atatgatggtaaa---atatatataacagtatcctctgatagaataggcagtagggtgggtgccgtggctcacgcctgtaatcccagcactttgagaggctgaggtgggacgatcccttgagaccaggaatttgagaccagtctgggcaacatggtgagactgtgtctctttaaaaaaaaaaaaaaaaaaaggg-----------cagtagaattgatacagctgaag--aaaaatgaacaagtaagaagatgtggtggaggaacttttccaggaagctgatataattatattaatatcagaaagaat---aggagaaaagccatcgtaagat---------ataagggacagCTGTGTCTGAAAATCCAAACTCTTCTCTGCTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcacccaggctggagtgcagtggtacaatctcgactcatggcaaccttcacctcccagattcaagcgattcccctgcctcagcctcccaagtacctgggattataggcgctcgcaaccacacccaggtaatttttgaatttttagtacagacggggtttcaccatattggtcaggctggtctcaaactcctgacctt--gtgattcgcccacctcagcttcccaatgtgcttagattactggcatgagccaccacgcctggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46998131 1000 + 51301725 Aatagccagcctgggcaacatagcgagattcccatctct--accaaa--aaaaaccccaaaaaa-----------ttagcccaccgt-ggtggtgcacacatgtggccccagctacttgggaggctgaggcaggaggattgcttgaggctgggaggttaaggctgcagtgagctatgattgcgccactgcactccagtctgggtgac-agtgcaagaccctgtctcaaaaaataaaaag-----aaaataaacatactaaaaaaGATAAGGACAC--GTTAGCAATGTGAAATAAGAACAATTATCCATAAAGCAAGGGgcttatggaaataaaaagtataaaaatatatgatggtaaa---aaatatataacagtaTCCTCTGATAGAATAGGCAGTAGggtgggtgccgtggctcacgcctgtaatcccagcactttgagtggctgaggtgggacgatcacttgagaccaggaatttgagaccagtctgggcaacatggtgagactgtgtctctttaaaaaaaaaaaaaaaaaaagggggggga-----caGTAGAACTGATACagctgaag--aaaaatgaacaagtaaGAAGATGTGGTGGAGGAACTTCTCCAGGAAGctgataaaattatattaatatcagaaagaAT---AGGAGAAAAGCCATCGTAAGAT---------ATAAGGGACAGCTGTTTCTGAAAATCCAAACTCTTCTCTGCTAAGAGAatcctgattttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcgcccaggctggagtgcagtggtacaatctcgactcatggcaaccttcacctcccagattcaagcgattctcctgcctcagcctcccaagtacctgggattataggcactcacaaccacacccaggtaatttttgaatttttagtagagacggggtttcaccatattggtcaggctggtctcaaactcctgacctt--gtgattcgcccacctcagcctcccaatgtgctgagattactggcatgagccaccacgcctggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46711068 999 + 50890351 AAAAGccagcctgggcaacatagcgagattcccatctactaaccaaaaaaaaaaaaaaaaaaaa-----------agaacccaccgtgggtggtgcacacatgtggccccagctacttgggaggctgaggcaggaggattgcttgagcctgggaggttaaggctgcagtgagctatgattgcgccactgcactccagtctaggtgac-agtgcaagaccctgtctcaaaaaataaaaag-----aaaataaaCatactaaaaaagataaggacacatgttagcaatgtgaaataagaacaattatccataaagcaaggggcttatggaaataaaaagtataaaaatatatgatggtaaa---aaatatataacagtatcctctgatagaataggcagtagggtgggtgccgtggctcacgcctgtaatcccagcactttgaaaggctgaggtgggacgatcacttgagaccaggaatttgagaccagtctgggcaacatggtgagactgtgtctctt--aaaaaaaaaaaaaaggggggg-----------cagtagaattgatacagctgaag--aaaaatgaacaagtaagaagatgtggtggaggaacttttccaggaagctgataaaattctattaatatcagaaagaat---aggagaaaagccatcgtaagat---------ataagggacagCTGTTTCTGAAAATCCAAACTCTTCTCTGCTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcgcccaggctggagtgcagtggtacaatctcgactcatggcaaccttcacctcccagattcaagcaattctcctgcctcagcctcccaagtacctgggattataggcactcacaaccacacccaggtaatttttgaatttttagtagagacggggtttcaccatattgctcaggctggtctcaaactcctgacctt--gtgattcgcccaccttagcttcccaatgtgctgagattatcggcatgagccaccacgcctggcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45281729 943 + 49145316 cgagaccatcctggtcaacatggtgaaa-ccccgtctct--actaaa------aatacaaaaaa-----------ttagctgggcat-ggtggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaattgcctgaacccaggaggcagaggttgcggtgagccgagattgcgccattgcactccagcctgggtaacaagagtgaaactccgtctcaaaaaaaaaaaaa-----aaaagaaTGA-----------GTAAGAACACATGTTAGC----------------------------------------------------AGTATAAAAATATATGATGGTAAACATATATATATAACATTATCCTCTAATGGAATAGGCAGGAGGGTgagtgcggtggctcacacctgtaagcctagcactttgagaggctgaggtgggaggatcacttgagaccaggagttcaagaccagtctgggcaacatggtgagaccttgtctcttt-aaaaaaaaaaaaaaaaGAAGAAGAAGACTAGGCAGTAGAATTGATACAGCTGAAG--AAAATTGAGCAAGCGAGAAAAC---GTGGAGGTGCTTTTCCAGGAAGCTGATATGTTAATATCAGAAAAAGGAAGAATAAGAAGAGACAAGCCATGGTAAAAT---------AGAAGGGACAGCTGCTTCTCAAAATCCAAAATCTTCTCTG---AGGATATCCTGAttttctttttgttttttttttcttttgaggtggagtttcactcttgttgcccaggctggagtgcaatggcgtgatctcggctcaccgcaacctctgcctcccaggttcaagcgattctcctgcctcagtctcccgagtagctgggattacaggcatgcgccaccgtgcccagctaa-ttttgcatttttagtagaggcagggtttcaccatgttggtcaggct-gtcttgaactcccaacctcaggtgatctgcccacctcggcctcccaaaatgctgagattacaggcgtgagccaccatacccggcc i calJac3.chr22 I 462 I 316 a score=1488255.000000 s hg38.chr19_GL949747v2_alt 1094 572 + 729520 GagaaccctgattttgttcaggtgtcagttggccacccttgttccttggagacttggcccttttctagtttcaggcatgaatcttgattagtctaagGCTTAGTGACGTGCtggttgtgaaagtgtggtccctgaaccagcagcgtcagcatcacctgggagctcgtcagaaaggcaaattcttgagccccacc----ccagacctactgaatcag--tcagaaactctgaaggtgagcttttcctttctcctcctctccaacctatggtttgacaagtcctccaggtgattctgatgcacactgaagtttaaacaccTTTAGCCCAGTTAGGTAAACTCACGCCCACTGCTAGTGGTTATTTAAGGAAGGGGCTGGATGCAATTGTGTTTCTTGAGATGTGAGTGGAAATCTCGTGGGAGGCTTCCTCATGTTGGAGAGGGCCGCGTTGGAAGGGCCTTTCTATGCCCTTCGTCTGCTTTTTATCTCATCCTTTCCAAAAAATTAACttttta----tttatttatttgagacagagtcttgctcttgtcgcccaggctggagtgcagtggcgcgatctcg s panTro4.chr19 58937582 574 + 63644993 GagaaccctgattttgttcaggtgtcaggtggccacccttgttccttggagacttggcccttttctagtttcaggcatgaatcttgattagtctaagGCTTAGTGACGTGCtggttgtgaaagtgtggtccctgaaccagcagcgtcagcatcacctgggagctcgtcagaaaggcaaattcttgagccccact----ccagacttactgaatcagagtcagaaactctgaaggcgagcttttcctttctcctcctctccaacctatggtttgacaagtcctccaggtgattctgatgcacactgaagtttaaacaccTTTAGCCCAGTTAGGTAAACGCACGCCCACTGCTAGTGGTTATTTAAGGAAGGGGCTGGATGCAATTGTGTTTCTTGAGATGTGAGTGGAAATCTCGTGGGAGGCTTCCTCATGTTGGAGAGGGCCGCGTTGGAAGGGCCTTTCTATGCCCTTCGTCTGCTTTTTATCTCATCCTTTCCAAAAAATTAACtttgta----tttatttatttgagacagagtcttgctcttgtcgcccaggctggagtgcagtggcgcgatctcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55799257 574 + 60714840 GagaaccctgattttgttcaggtatcaagtggccacccttgttccttggagacttggcccttttctagtttcaggcatgaatcttgattagtctaagGCTTAGTGACGTGCtggttctgaaagtgtggtccctgaaccagcagcttcagcatcacctgggagctcgtcataaaggcaaattcttgagccccact----ccagacctactgaatcagagtcagaaactctgaaggtgagcttttcctttctcctcctctccaacctatggtttgacaagtcctccaggtgattctgatgcacactaaagtttaaacactTTTAGCCCAGTTAGGTAAACTCATGCCCACTGCTAGTGCTTACTTAAGGAAGGGGCTGGATACAATTGTGTTTCTTGAGATGTGAGTGGAAATCTCGTGGGAGGCTTCCTCATGTTGGAGAGGGCCACGTTGGAAGGGCCTTTCTATGCCCTTTGTCTGCTTTTTATCTCATCCTTTCCAAAAAATTAACttttta----tttatttatttgagacagagtcttgctcttgtcgcccaggctggagtgtagtggcgcgatctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102565761 557 - 106955855 Gagaaccctgattttgttcaggtgtcaagtggccacccttgttccttggagacttggcccttttctagtt-----------tcttgattactctaagGCTTAGTAACGTGCtgatttggaaaatgtggtccctgaaccagcagcctcagcctcacctgggagctcgtcagaaaggcaaattcttgagccccact----ccagacctactgaatcagagtcagaaactctgacagttagcttttcctttctcctcctctccaacctgtggttggacaagtcctccaggtgattctgatgcacactaaagtttaaacacTTTCAGCCCAGTTAGGTAACCTCACGCCCACTGCTAGTGGTTACTTAAGGAAGGGGCTGGATGCAAT--TGTTTCTTGAGATGTGAGTGGGAATCTCGTGAGAGGCTTCCTCATGTTGGAGAGGGCCGCGTTGGAAGGGCCTTTCTACGCCCTTCGTCTGCTTTTTAGCTCATCCTTTCCAAAAAATTAACtt--------tttatttatttcagacagagtcttgctcttgtcgcccaggctggagtgcagtggcgcgatctcg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59859285 566 + 64156825 GagaaccctgattttgttcaggtgtcaactggccacccttgttccttggagacttggcccttttctagtttcaggtatgaatcttgattagtctaagGCTTAGTGACGTGCtggttctgaaagtgtggtccctgaaccagcagcgtcagcattacccgggagctcatc----aggcaaattcttgagccccacccacgccagccctactgaa------tcagaaactctgaaggcgagcttttcctttttcctcctctccaacctatagtttgacaagtcctccaggtgattctgatgcacgctaaagtttaaacaccGTTAGCCCAGTTAGGTAACCTCACACCCAGTGCTAGTGATCACTTAAGGAAGGGGCTGGATGCAAGTGTGTTTCTTGAGATGTGAGTGGAAATCTCATGGGAGGCTTCCTCATGTTAGAAAGGGACGCCTTGGAAAGG-----CTATGCCCATCGTCTGCTTTTTATCTCATCCTTTCCAAAAAATTAACtttttatgtatttatttttttgagatgaagtcttgct-gtgctgcccaggctagagtgcagtggcgcgatcttg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54876263 566 + 59248254 Gagaaccctgattttgttcaggtgtcaactggccacccttgttccttggagacttggcccttttctagtttcaggtatgaatcttgattagtctaaggcttagtgacgtgctggttctgaaagtgtggtccctgaaccagcagcgtcagcattacccgggagctcatc----aggcaaattcttgagccccacccacgccagccctactgaa------tcagaaactctgaaggcgagcttttcctttttcctcctctccaacctatagtttgacaagtcctccaggtgattctgatgcacgctaaagtttaaacaccgttagcccagttaggtaacctgacacccagtgctagtgatcatttaaggaaggggctggatgcaagtgtgtttcttgagatgtgagtggaaatctcatgggaggcttcCTCATGTTAGAAAGGGACGCCTTGGAAAGG-----CTATGCCCATCGTCTGCTTTTTATCTCATCCTTTCCAAAAAATTAACtttttatgtatttatttttttgagatgaagtcttgct-gtgctgcccaggctagagtgcagtggcgcgatcttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46999131 566 + 51301725 gagaaCCCTGATTTTGTTCAGGTGTCAACTGGCCACGCTTGTTCCTTGGAGACTTGGTCCTTTTCTAGTTTCAGGTATGAATCTTGATTAGTCTAAGGCTTAGTGATGTGCTGGTTCTGAAAGTGTGGTCCCTGAACCAGCAGCGTCAGCATTACCCGGGAGCTCATC----AGGCAAATTCTTGAGCCCCACCCACGCCAgccctactgaa------tcagaaactctgaaggcgagcttctcctttttcctcctctccacCCTATGGTTTGacaagtcctccaggtgattccgATGCACGCTAAAGTTTAAACACTGTTCGCCCAGTTCGGTAACCTCACACCCAGTGCTAGTGATCACTTAAGGAAGGGGCTGGATGCAAGCGTGTTTCTTGAGATGTGAGTGGAAATCTCATGGGAGGCTTCCTCATGTTAGAAAGGGACGCCTTGGAAAGA-----CCATGCCCGTCGTCTGCTTTTTATCTCATCCTTtccaaaaaattaactttttatgtctttatttttttgagatgaagtcttgtt-gtgttgcccaggctggagtgcaggggcgcgatcttg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46712067 566 + 50890351 Gagaaccctgattttgttcaggtgtcaactggccacccttgttccttggagacttggcccttttctagtttcaggtatgaatcttgattagtctaaggcttagtgacgtgctggttctgaaagtgtggtccctgaaccagcagcgtcagcattacccgggagcttatc----aggcaaattcttgagccccacccacgccagccctactgaa------tcagaaagtctgagggcgagcttttcctttttcctcctctccaccccatggtttgacaagtcctccaggtgattctgatgcacgctaaagtttaaacactgttcgcccagttaggtaacctcacacccagtgctagtgatcacttaaggaaggggctggatgcaaacgtgtttcttgagatgtgagtggaaatctcatgggaggcttcCTCATGTTAGAAAGGGACGCCTTGGAAAGA-----CTATGCCCATCGTCTGCTTTTTATCTCATCCTTTCCAAAAAATTAACtttttatgtatttatttttttgagatgaagtcttgct-gtgttgcccaggctggattgcagtggcgcgatcttg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45282988 468 + 49145316 GGgaaaccggattttgttcaggtgtcaagtggccacccttgttccttggagacttggcccctttctagtctcaggcatgaatcctgatgcgtctaagGCTTAGCGACATGCtgattcagagagtgtagcccctgagcaagcagcatcagcgtgacccgggagcttgtcagaacggcaaatccttgagcccctct----ccagacctatggaa------tcag--actctgcgggtgagcttttcctttttcctcctctccaagctgtggtttcacaagttctccaggcaattctgacgcaccctgaagtttaaACACT-CGAGCCCAGTTAGGTAACCCCACACTTACTGCTAGTGATGAC-TAAGGAAGGGGCTGGACGCAGCTGTGTTTCGGGAGATTTAAGTGGAAACCt-----------------------------------------------------------------ttttt-----------------------------------tttttttttttgagacggagtttcgctcttgttacccaggctggagtgcaatggcgtgatcttg i calJac3.chr22 I 316 C 0 a score=206234.000000 s hg38.chr19_GL949747v2_alt 1666 87 + 729520 gctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagcctcccgagtagctggggctacaggcacctgctactat s panTro4.chr19 58938156 87 + 63644993 gctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagcctcccgagtagctggggctacaggcacctgctactat i panTro4.chr19 C 0 I 314 s ponAbe2.chr19 55799831 87 + 60714840 gctcacggcaacctccacctcctgggttcaagcaattctcctgcctcagcctcccaagtagctggggctacaggcacctgctactat i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59859851 87 + 64156825 gctcacttcaacctccacctcctgggttccagcaattcttctgcctcaacctcccgagtagctgggactacgggcacctgctactat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54876829 87 + 59248254 gctcactgcaacctccacctcctgggttccagcaattcttctgcctcaacctcccgagtagctgggactacgggcacctgctactat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46999697 87 + 51301725 gctcactgcaacctccacctcctgggttccagcaattcttctgcctcaacctcccgagtagctgggactacaggcacctgctactat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46712633 87 + 50890351 gctcactgccaccttcacctcctgggttccagcaattcttctgcctcaacctcccaagtagctgggactacaggcacctgctactat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45283456 87 + 49145316 gctcacagcaacctccgcctcctgggttcaggcaattctcctgcctcagcctcctgagtagctgggactacaggcaggcgccaccgt i calJac3.chr22 C 0 C 0 e nomLeu3.chr10 102566318 0 - 106955855 C a score=12894.000000 s hg38.chr19_GL949747v2_alt 1753 5 + 729520 gccca s panTro4.chr19 58938557 5 + 63644993 gccca i panTro4.chr19 I 314 C 0 s ponAbe2.chr19 55799918 5 + 60714840 gccca i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59859938 5 + 64156825 gccca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54876916 5 + 59248254 gccca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46999784 5 + 51301725 gccca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46712720 5 + 50890351 gcccg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45283543 5 + 49145316 gccca i calJac3.chr22 C 0 I 306 e nomLeu3.chr10 102566318 0 - 106955855 C a score=1009888.000000 s hg38.chr19_GL949747v2_alt 1758 450 + 729520 gctaa-tttttgtattttccgtagagacagggcttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatctgcccacctcagcctcccaaagtgctggcattacaggagcgagccacctcacctggcTTAACTTTTTATTTTAAAATAGTTCTGGAggccaggtgtggcagctcacgcctataatcccag--cactttgggagtctgaggcagaaggatctcttgagcccaggtgttcaagaccagcctgggcaacatggcaaaa--tcccatctctacaaaaaagtttttaaaaattagcatttgcctgtgcgtccagcttctcaggaagctgaggcgggaggatcacttgagcttaggaggtcaaggctgcagtgagACACCATACTGGGATTACAGGCGTGAGACACCACTCCAGGTCTGGGttctct-----ttttttttttttt s panTro4.chr19 58938562 453 + 63644993 gctaa-tttttgtattttccgtagagacagggcttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatctgcccacctcagcctcccaaagtgctggcattacaggagtgagccacctcacctggcTTAACTTTTTATTTTAAAATAGTCCTGGAggccaggtgtggcagctcacgcctataatcccag--cactttgggagtctgaggcagaaggatctcttgagcccaggtgtttaagaccagcctgggcaacatggcaaaaaatcccatctctacaaaaaattttttaaaaattagcatttgcctgtgtgtccagcttcttgggaagctgaggtgggaggatcacttgagcctaggaggtcaaggctgcagtgagACACCATACTGGGATTACAGGCATGAGACACCACTCCAGGTCTGGGttctct----cttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55799923 455 + 60714840 gctaa-tttttgtattttccgtagagacagggcttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatctgcccacctcagcctcccaaagtgctgggattacaggaacgagccacctcacctggctTAACTTTTTATTTTAAAATAGTTCTGGAggccaggtgtggcagctcacgcctataatcccag--cactttgggagtctgaggcagaaggatctcttgagcccaggtgttcaagaccagcctgggcaacatggcaaaa--tcccatctctacaaaaaattttttaaaaattagcatttgcctgtgcgtccagcttcttgggaagctgaggcgggaggatcacttgagcctaggaggtcaaggctgcagtgagACACCATACTGGGATTACAGGCATGAGACACCACACCAGGTCTGGGTTCCCttttttttttttttttttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59859943 449 + 64156825 gctaa-tttttgtatttttagtagagacagggcttcaccatgttgcccaggctggtctcaaacccctgacctcaagtgatctgcccacctgtgcctcccaaagtgctggcattacaggagcaagctacctcacctggcTTAACTTTTTATTTTAAAACCATTCTGGAggccaggtgtggcggctcatgcctataatcccag--ctctttgggagtctgaggcagaaggatcac-tgagcccaggtattcaagaccaacctgggcaacatggcaaaa--tcccatctctacaaaaaatttttaaaaaattagcattcgcctgtacatccagctactttggaagctgaggcgggaggatcacttgagcctgggaggtcaaggctgcagtgagACACCATGCTGGGAATACAGGCATGAGACACCACTCCAGGTCTGGGGGTTCT-----TTTTTTTTTTTTT i rheMac3.chr19 C 0 I 569 s macFas5.chr19 54876921 444 + 59248254 gctaa-tttttgtatttttagtagagacagggcttcaccatgttgcccaggctggtctcaaacccctgacctcaagtgatctgcccacctgtgcctcccaaagtgctgggattacaggagcaagctacctcacctggcTTAACTTTTTATTTTAAAACCATTCTGGAggccaggtgtggcggctcatgcctataatcccag--ctctttgggagtctgaggcagaaggatcac-tgagcccaggtattcaagaccaacctgggcaacatggcaaaa--tcccatctctacaaaaaattttttaaaaattagcattcgcctgtacatccagctacttgggaagctgaggcgggaggatcacttgagcctgggaggtcaaggctgcagtgagACACCATGCTGGGAATACAGGCATGAGACACCACTCCAGGTCTGGGGGttct-----tttttttt----- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46999789 449 + 51301725 gctaa-tttttgtatttttagtagagacaggacttcaccatgttggccaggctggtctcaaacccctgacctcaagtgatctgcccacctgtgcctcccaaagtgctgggattacaggagcaagcTACTTCACCTggcttaactttttattttaaaaccgttctggaggccaggtgtggcggctcatgcctataatcccag--ctctttgggagtctgaggcagaaggatcac-tgagcccaggtattcaagaccaacctgggcaacatggcaaaa--tcccatctctacaaaaaattttttaaaaattagcattcgCCTGTacatccagctacttgggaagctgaggcgggaggatcacttgagcctgggaggtcaaggctgcagtgagacaccatgctgggaatacaggcatgagacactacTCCAGGTCTgggggttct-----ctctctctctttt i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 46712725 452 + 50890351 gctaa-tttttgtatttttagtagagacagggcttcaccatgttggccaggctggtctcaaaccactgacctcaagtgatctgcccacctgtgcctcccaaagtgctgggattataggagcaaaccacctcacctggcTTACCTTTTTATTTTAAAACAGTTCTGGAggccaggtgtggcggctcatgcctataatcccagctctctttgggagtctgaggcagaaggatcacttgagcccaggtattcaagaccaacctgggcaacatggcaaaa--tcccatctctacaaaaaattttttaaaaattagcattcgcctatacatccagctacttgggaagctgaggtgggaggatcacttgagcctgggaggtcaaggctgcagtgagACACCATGCTGGGAATACAGGCATGAGACACCACTCCAGGTCTGGGGGTTCT-----CTCTTTTTtttgt i chlSab2.chr6 C 0 I 18 s calJac3.chr22 45283854 444 + 49145316 gctaattttttgtatctttagttgagatggggtttcaccatgttggccaggctggtcttgaactcctgacctc--gtgatctgcctgcctcggcctcccagcatgctgggattacaggagcaagccgcctcacctggccTGACATTTTATTTTAAAATCGTTCTGGAgaccaggtgtggcaactcatgcctgtaattccag--cactttgggagtctgaggcagaagggtcacttgagcccaggtgttaaagaccagcctgggcaatttggcaaaa--ccccatctctacaaaaagtttttaaaaaattagtgttcacctgtacttccagctacttgggaggctgaagaaggaggatcacttgagcccaggaggtcaaggctgtcgtgaaccACCATGCTGGGATTACAGGCATGAGGCATCACTTGAAGTCTTGGGttctc-----tttttttt----- i calJac3.chr22 I 306 C 0 e nomLeu3.chr10 102566318 0 - 106955855 C a score=287241.000000 s hg38.chr19_GL949747v2_alt 2208 173 + 729520 tttttttgagacagagtctcactctttcgcccaggctgcaatgaagtggcaccatcttggctcacagcaacctccaccccgcagattcaagcgattctcctgcctcagcctcctgagcagctgggattacaggcgcccgccaccaagcctggctaatttttatattttAGAGA s panTro4.chr19 58939015 173 + 63644993 tttttttgagacagagtctcactctttcgcccaggctgcaatgaagtggtgccatcttggctcacagcaacctgcaccccgcagattcaagcgattctcctgcctcagcctcctgagcagctgggattacaggcgcccaccaccaagcctggctaatttttatattttAGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55800378 172 + 60714840 tttttttgaaacagaatctcactctttcgcccaggctgcaatgaa-tggcaccatcttggctcacagcaacctccaccccgcaggttcaagcgattctcctgcctcagcctcctgagcagctgggattacaggcgcccgccaccaagcctggctaatttttatattttAGAGA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54877365 171 + 59248254 tttttttgagacag--tctccctctttcgcccaagctggagtgaagtggcgtgatctcggctcactgcaacctccgccccacagattcaagtgattctcctgcctcagcctcctgagcagctaggattataggcgcccgccaccaagcctggctaatttttatattttagaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47000242 171 + 51301725 tttttttgagacag--tctccctctttcgcccaagctggagtgaagtggcgtgatcttggctcactgcaacctccaccccccagattcaagtgattctcctgcctcagcctcctgagcagctaggattataggcgcccgccaccaagcctggctaatttttatattttagaga i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 46713195 171 + 50890351 tttttttgagacag--tctccctcttttgcccaagctggagtgaagtggcgtaatctcggctcactgcaacctccgccccacagattcaagtgattctcctgcctcagcctcctgggcagctaggattataggcacccgccaccaagcctggctaatttttatattttagaga i chlSab2.chr6 I 18 I 405 s calJac3.chr22 45284298 173 + 49145316 tttttttgaaatggagtctcactcttttgccaaggtgggagtgaagtggcacaatcttggctcactgcaacctctgcccccgaggttcaaggaattctcctgcttcagcctcccaagcagctgggattataggcacccaccaccaagcctggctaatttttgtattttagaga i calJac3.chr22 C 0 C 0 e nomLeu3.chr10 102566318 0 - 106955855 C e rheMac3.chr19 59860392 569 + 64156825 I a score=180.000000 s hg38.chr19_GL949747v2_alt 2381 1 + 729520 T s panTro4.chr19 58939188 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55800550 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45284471 1 + 49145316 c i calJac3.chr22 C 0 I 2412 e nomLeu3.chr10 102566318 0 - 106955855 C e chlSab2.chr6 46713366 405 + 50890351 I e papAnu2.chr19 47000413 0 + 51301725 C e macFas5.chr19 54877536 0 + 59248254 C e rheMac3.chr19 59860392 569 + 64156825 I a score=15155.000000 s hg38.chr19_GL949747v2_alt 2382 31 + 729520 gcccaggctggagtacagtggtgcgatctca s panTro4.chr19 58939189 31 + 63644993 gcccaggctggagtacagtggtgcgatctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55800551 31 + 60714840 gcccaggctggagtacagtggtgcgatctca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54877536 18 + 59248254 -------------cgcggttttgccacgttg i macFas5.chr19 C 0 I 5 s papAnu2.chr19 47000413 18 + 51301725 -------------cgcggttttgccatgttg i papAnu2.chr19 C 0 I 5 s calJac3.chr22 45286884 31 + 49145316 gtccagactggagtgcaatggtacaatctca i calJac3.chr22 I 2412 C 0 e nomLeu3.chr10 102566318 0 - 106955855 C e chlSab2.chr6 46713366 405 + 50890351 I e rheMac3.chr19 59860392 569 + 64156825 I a score=130378.000000 s hg38.chr19_GL949747v2_alt 2413 112 + 729520 gctcaacacaacctccacctcccggattcaagtgattctcctgcctcagcctccccattagctgagattacaggcatgcaccaccacgcccggctaa--ttttgtatttttagt s panTro4.chr19 58939220 111 + 63644993 gctcaacacaacctccacctcccgggttcaagtgattctcctgcctcagcctccccgttagctgagattgcaggcatgcaccaccacgcccggcta---ttttgtatttttact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55800582 112 + 60714840 gctcaacacaacctccacctcccgggttcaagtgattctcctacctcagcctccccattagctgagattacaggcatgtgccaccacgcccggctaa--ttttgtatttttagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102566318 112 - 106955855 gctcaacataacctccacctcccaggttcaagcgattctcctgcctcagcctccccagtagctgagattacaggcatgcgccaccacacctggctca--ttttgtatttttagt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54877559 112 + 59248254 gctggcctcaaactcaaactcctgacctcaaatgatccgcccgcctctgcctctgaaagtgctgggattacaggcatgagccaccgtgcccCGACGG--TTCTGTTTTTGTAAT i macFas5.chr19 I 5 I 1 s papAnu2.chr19 47000436 112 + 51301725 gctggcctcaaactcaaactcctgacctcaagtgatctgcccgcctctgcctccaaaagtgctgggattacaggcgtgagccaccacgccccgacGG--TTCTGTTTTTGTAAT i papAnu2.chr19 I 5 I 978 s calJac3.chr22 45286915 113 + 49145316 gctcaccacaacc-ctgcctcctcgtttcaagcaattcgcctgcctcagcctcccaagtagctggggttacaggcgcccgccaccacgcttggctagattttgatatcgttagt i calJac3.chr22 C 0 C 0 e chlSab2.chr6 46713366 405 + 50890351 I e rheMac3.chr19 59860392 569 + 64156825 I a score=18620.000000 s hg38.chr19_GL949747v2_alt 2525 25 + 729520 agag-acagg---gtttctctgtgttggt s panTro4.chr19 58939331 25 + 63644993 agag-acagg---gtttctctgtgttggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55800694 25 + 60714840 agag-acagg---gtttctttatgttggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102566430 25 - 106955855 agag-acggg---gtttctccaggttggt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54877672 29 + 59248254 AGCGCACAGGTTCATTTTTCTGTGTAAGT i macFas5.chr19 I 1 I 202 s calJac3.chr22 45287028 25 + 49145316 agaa-atggg---gtttcaccatgttgac i calJac3.chr22 C 0 C 0 e chlSab2.chr6 46713366 405 + 50890351 I e papAnu2.chr19 47000548 978 + 51301725 I e rheMac3.chr19 59860392 569 + 64156825 I a score=294344.000000 s hg38.chr19_GL949747v2_alt 2550 387 + 729520 caggttggtctccaattcctgacctccggtgatctgcctgcctcggcctcccaaagtgctgggattacgggtgtgagccactgtgcccggcTGATCTTACATTTTCTTGTGCACTTATTCATGAGCTTTTTTTTTTTTT-ATGAAAATGAATTCCTACCATCCATTCTCCTTCCAAA-CTGCTCATACCCAGTATTCCCAAGGTTTTTGCACATGTATATAACAGAATGTCAAAGTAGATTCATTGCAATCTCAGTTTCTGCTCAGGCCCAAAGATTATAGATGCCAGCGAGGTCAGATCTCACAGTAAGGCCATTTCTGCATGACTTCAGGAGAAAATGCTGAAAACCTAATTTCCCCACACCCTTGGCCTCTTGTCCACCTGAAGGT s panTro4.chr19 58939356 388 + 63644993 caggttggtctccaattcccgacctcaggtgatctgcctgcctcagcctcccaaagtgctgggattatgggtgtgagccactgtgcccggcTGATCTTACATTTTCTTATGCACTTATTCATGAGCTTTTTTTTTTTTTTATGAAAATGAATTCCTACCATCCATTCTCCTTCCAAA-CTGCTCATATGCAGTATTCCCAAGGTTTTTGCACATGTATATAACAGAATGTCAAAGTAGATTCATTGCAATCTCAGTTTCTGCTCAGGCCCAAAGATTATAGATGCCAGCGAGGTCAGATCTCACAGTAGGGCCATTTCTGCATGACTTCAGGAGAAAATGCTGAAAACCTAATTTCCCCACACGCTTGGCCTCTTGTCCACCTGAAGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55800719 377 + 60714840 caggttggtctccaactcccgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattctgggcgtcagccactgcgcccggctGATCTTACATTTTCTCGTGCACTTATTCATGAGCTTTTTTTTTTTA--ATGAAAATGAATTCCTACCATCCATTCTCCTTCCAAA-CTGCTC---------ATTCCCAAGGTTTTTGCACATGTATATAACAGAATGTTAAAGTCGATTCATTGCAATCTCAGTTTCTGCTCAGGCCCAAAGAGTACAGATGCCAGCGAGGTCAGATCTCACAGTAGGGCCATTTCTACGTGACTTCAGGAGAAGATGCTGAAAACCTAATTTCCCCACACCCTTGGCCTCTTGTCCACCTGAAGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102566455 387 - 106955855 caggttggtctccaactcccgaccgcaggtgatctgcctgcctcggcctcccaaagtgctgggattacgggcgtgagccactgcgcccggcTGATCTTACATTTTCTCGTGCACTTATTCATGAGCTTTTTTTTTTTTA-ATGAAAATGAATTACTACCATCCATTCTCCTTCCAAA-CTGCTCATACGCGGTATTCCCAAGGTTTTTGCACATGTATATAACAGAATGTCAAAGTAGATTCATTGCAATCTCAGTTTCTGCTCAGGCCCAAAGATTACAGATGCCAGCAAGGTCAGATCTCACAGTAGGGCCATTTCTGCATGACTTCAGGAGAAGATACTGAAAACCTAATTTCCCCACACCCTTGGCCTCTTGTCCACCTGAAGGT i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45287053 360 + 49145316 taggctggtctcaaactcatgacctcaggtgatccacccaactcgacctcccaaagtgctgggattacaggcatgagctaccatgccAGCCTGAGCTT----------------------------TTTTTTTTTTTTA-ATGAAAACGAATTCCTACCATCCATTCTCCTTCCAAAGCTGCTCATACACAGTATTCCCGTGGTTTTTGCACATTTATTTAACAGAATGTCAAAGTAGACTCATTGCGATCTCAGTTTCTGCTCAGGCCCAGAGATTACAGTTTCCAACGAAGTAGGATCTCACAGTAGGACCATTTCTGCATGACTTCAGGGGAAGATGCTGAAAAGCTAATTTCCCCACACCCTTTGTCTCTTGTCTGTCCGAAGCT i calJac3.chr22 C 0 C 0 e chlSab2.chr6 46713366 405 + 50890351 I e papAnu2.chr19 47000548 978 + 51301725 I e macFas5.chr19 54877701 202 + 59248254 I e rheMac3.chr19 59860392 569 + 64156825 I a score=5955.000000 s hg38.chr19_GL949747v2_alt 2937 28 + 729520 AAGAAAGGAGTGTtggggggaaggggga s panTro4.chr19 58939744 28 + 63644993 AAGAAAGGAGTGTtggggggagggggga i panTro4.chr19 C 0 C 0 s calJac3.chr22 45287413 28 + 49145316 AGGAAAGGAGTGTTGAGATTAGGGGAGA i calJac3.chr22 C 0 I 1294 e ponAbe2.chr19 55801096 0 + 60714840 C e nomLeu3.chr10 102566842 0 - 106955855 C e chlSab2.chr6 46713366 405 + 50890351 I e papAnu2.chr19 47000548 978 + 51301725 I e macFas5.chr19 54877701 202 + 59248254 I e rheMac3.chr19 59860392 569 + 64156825 I a score=17229.000000 s hg38.chr19_GL949747v2_alt 2965 188 + 729520 gggatagcattaggagatatacctaatgctaaatgacgagttagtgggtgcagcacaccagcatggcacatgtatacatatgtaactaacctgcacattgtgcacatgtaccctaaaacttaaagtataataataataaaataaaataaaaataaataaataaataaaaattaaaaaaagaaaaaaaa s panTro4.chr19 58939772 188 + 63644993 gggatagcattaggagatatacctaatgctaaatgacgagttaatgggtgcagcacaccagcatggcacatgtatacatatgtaactaacctgcacattgtgcacatgtaccctaaaagttaaagtataataataataaaataaAATaaaaataaataaataaataaaaattaaaaaaagaaaaaaaa i panTro4.chr19 C 0 C 0 e ponAbe2.chr19 55801096 0 + 60714840 C e calJac3.chr22 45287441 1294 + 49145316 I e nomLeu3.chr10 102566842 0 - 106955855 C e chlSab2.chr6 46713366 405 + 50890351 I e papAnu2.chr19 47000548 978 + 51301725 I e macFas5.chr19 54877701 202 + 59248254 I e rheMac3.chr19 59860392 569 + 64156825 I a score=814.000000 s hg38.chr19_GL949747v2_alt 3153 5 + 729520 aagaa s panTro4.chr19 58939960 3 + 63644993 aa--a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801096 5 + 60714840 AAGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102566842 5 - 106955855 AAGAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54877903 5 + 59248254 AAGGT i macFas5.chr19 I 202 C 0 e calJac3.chr22 45287441 1294 + 49145316 I e chlSab2.chr6 46713366 405 + 50890351 I e papAnu2.chr19 47000548 978 + 51301725 I e rheMac3.chr19 59860392 569 + 64156825 I a score=34363.000000 s hg38.chr19_GL949747v2_alt 3158 33 + 729520 aGGAGTGTTGAGATTAGAAGGTATTTTTTTTCC s panTro4.chr19 58939963 33 + 63644993 aGGAGTGTTGAGATTAGAAGGTATTTTTTTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801101 33 + 60714840 AGGAGTGTTGAGATTAGAAGAttttttttttcc i ponAbe2.chr19 C 0 I 6 s nomLeu3.chr10 102566847 33 - 106955855 AGGAGTGTTGAGATTAGAAGATAttttttttcc i nomLeu3.chr10 C 0 I 6 s macFas5.chr19 54877908 31 + 59248254 AGGAGTGTTGCAATTAGAAGAtttttttttc-- i macFas5.chr19 C 0 I 7 s chlSab2.chr6 46713771 31 + 50890351 AGGAGTGTTGAAATTAGAAGAttttttttcc-- i chlSab2.chr6 I 405 I 6 e calJac3.chr22 45287441 1294 + 49145316 I e papAnu2.chr19 47000548 978 + 51301725 I e rheMac3.chr19 59860392 569 + 64156825 I a score=256941.000000 s hg38.chr19_GL949747v2_alt 3191 155 + 729520 TAttgggatacaggtggtgtttggttgcatgagtaagttctttagtggtgctttgtgagattgtggtgtagccatcacccaagcagtatacactgcaccccatttatagtcttttatccctcgcccccctctcacctttcccc-ccaagtccccaa s panTro4.chr19 58939996 156 + 63644993 TAttgggatacaggtggtgtttggttgcatgagtaagttctttagtggtgctttgtgagattgtggtgtagccatcacccaagcagtatacactgcaccccatttatagtcttttatccctcgcccccctctcacctttccccaccaagtccccaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801140 155 + 60714840 tattgggatacaggtggtgtttggttgcatgagtaagttctttagtggtgctttgtgagattgtggtgcagccatcacccaagcagtatacactgcaccctattcatagtcttttatccctcgcccccctctcacctttcccc-ccaagtccccaa i ponAbe2.chr19 I 6 C 0 s nomLeu3.chr10 102566886 155 - 106955855 tattgggatacaggtggtgtttggttgcatgagtaagttctttagtggtgctttgtgagatcgaggtgcagccatcacccaagccgtatacactgcaccctattcaaagtcttttatccctcgcccccctctcacctttcccc-ccaagtgcccaa i nomLeu3.chr10 I 6 C 0 s rheMac3.chr19 59860961 147 + 64156825 tattgagatacaggtggtgtttggttgcatgagtaagtttttttg--------tgtgagattttggtgcacccatcacccaagcagtatacactgcaccttatttgtagtcttttatccctcgccccccttccaccttttacc-ccaagtccccaa i rheMac3.chr19 I 569 C 0 s macFas5.chr19 54877946 147 + 59248254 tattgagatacacgtggtgtttggttgcatgagtaagttctttag--------tgtgagattttggtgcacccatcacccaagcagtatacactgcaccttatttgtagtcttttatccctcgccccccttccaccttttacc-ccaagtccccaa i macFas5.chr19 I 7 C 0 s chlSab2.chr6 46713808 147 + 50890351 tatcgagatacaggtggtgtttggttgcatgagtaagttctttag--------tgtgagattttggtgcacccatcacccaagcagtatacactgcaccttatttgtagtcttttatcccttgccccccttccaccttttacc-ccaagtccccaa i chlSab2.chr6 I 6 C 0 e calJac3.chr22 45287441 1294 + 49145316 I e papAnu2.chr19 47000548 978 + 51301725 I a score=236373.000000 s hg38.chr19_GL949747v2_alt 3346 104 + 729520 agtccattgtatcattcttatgcctttgcatcctcatagtttagctcccacatatcagtgagaacatatgatgtttggttttccattcctgagtt-acttcactt s panTro4.chr19 58940152 104 + 63644993 agtccattgtatcattcttatgcctttgcatcctcagagtttagctcccacatgtcagtgagaacatacgatgtttggttttccattcctgagtt-acttcactt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801295 105 + 60714840 agaccattgtatcattcttatgcctttgcatcctcatagtttagctcccacatatcagtgagaacatatgatgtttggttttccactcctgagttaacgtcactt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102567041 104 - 106955855 agaccattgtatcattcttatgcctttgcatcttcatagtttagctcccacatatcagtgagaacatacgatgtttggttttccattcctgagtt-acttcactt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59861108 104 + 64156825 agtccattgtatcattcttatgcctttgcgtcctcatagtttagctcccacttatcagtgagaacatacgatgtttggttttccattcctgagtt-acttcactt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54878093 104 + 59248254 agtccattgtatcattcttatgcctttgcgtcctcatagtttagctcccacttatcagtgagaacatacgatgtttggttttccattcctgagtt-acttcactt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46713955 104 + 50890351 agtccattgtatcattcttatgcctttgcgtcctcatagtttagctcccacttatcagtgagaacatacaatgtttggttttccattcctgagct-acttcactt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3856875 100 - 49145316 agcccattgtgtcattcttatgtctttgtgtcctcataacttagctctcacttatgagtgagaacat---atgcttggtttt-tgttcctgagtt-acttcactt i calJac3.chr22 n 1294 C 0 e papAnu2.chr19 47000548 978 + 51301725 I a score=120754.000000 s hg38.chr19_GL949747v2_alt 3450 43 + 729520 agaataatagtctccaGAGATTAGAAGAGTttttgttttgttt----- s panTro4.chr19 58940256 41 + 63644993 agaataatagtctccaGAGATTAGAAG--TTTTTGTTTTGTTT----- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801400 43 + 60714840 agaataatagtctccaGAGATTAGAAGAGTTTTTGTTTTGTTT----- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102567145 43 - 106955855 agaataatagtctccaGAGATTAGAAGAGTTTTTGTTTTGTTT----- i nomLeu3.chr10 C 0 I 3415 s rheMac3.chr19 59861212 43 + 64156825 agaataatagtctccaGAGATTAGAAGCGTTTTTGTTTTGGTT----- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54878197 43 + 59248254 agaataatagtctccaGAGATTAGAAGCGTTTTTGTTTTGGTT----- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47001526 43 + 51301725 agaataatagtgtCCAGAGATtagaagagtttttgttttggtt----- i papAnu2.chr19 I 978 C 0 s chlSab2.chr6 46714059 43 + 50890351 agaataatagtctccaGAGATTAGAAGCGTTTTTGTTTTGGTT----- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3856975 48 - 49145316 agaataatactttccaGAGATTAGAAGCGTTTTTGTTTGGTTCTGTTC i calJac3.chr22 C 0 C 0 a score=12075.000000 s hg38.chr19_GL949747v2_alt 3493 5 + 729520 tgttt s panTro4.chr19 58940297 5 + 63644993 TATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801443 5 + 60714840 TGTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59861255 5 + 64156825 TGTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54878240 5 + 59248254 TGTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47001569 5 + 51301725 tgttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46714102 5 + 50890351 TGTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3857023 5 - 49145316 TGTTT i calJac3.chr22 C 0 C 0 e nomLeu3.chr10 102567188 3415 - 106955855 I a score=1110817.000000 s hg38.chr19_GL949747v2_alt 3498 366 + 729520 ctgtgtgtttgtttACGTAAGCTGTTGGTGTGCTGTGAGTCCCATCCTCTGTCCACCGTAGATGTGTGATGGAGGATGACAGTCTCTTCAACTGGACAATTCAGAGTAGTTATATGGGGTGAGGGGCGGGTCCAGAGAGGAATGGGGTCtgatatggtttggctttatgtccccacccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattgaatcatggaggtggcttctaccttgttgttctcatgata--aagtgagttctcaggagatctgatggttttataagcgtttggcaagttcctcctttgcttgctcttctctctctcttgttgccttgtg s panTro4.chr19 58940302 366 + 63644993 CTGTGTGTTTGTTTACGTAAGCTGTTGGTGTGCTGTGACTCCCATCCTCTGTCCACCATAGATGTGTGATGGAGGATGACAGTCTCTTCAACTGGACAATTCAGAGTAGTTATATGGGGTGAGGGGCGGGCCCAGAGAGGAATGGGGTCTCatatggtttggctttatgtccccacccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattgaatcatggaggtggcttctaccttgttgttctcatgata--aagtgagttctcaggagatctgatggttttataagcatttggcaagttcctcctttgcttgctcttctctctctcctgttgccttgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801448 368 + 60714840 CTGTGTGTTTGTTTACATAAGCTGTTGGTGTGTTGTGAGTCCCATCCTCTGTCCACCATAGGTGTGTGATGGAGGATGACAGTCTCTTCAACTGGACAATTCAGAGTAGTTATATGGGGTGAGGGGCGGGCCCAGAGAGGAATGGGGTCtgatatggtttggctttatgtccccacccaaatctcatcttgaatgataatccccaggtgttgggggaggaacctggtgggaggtgattggatcatggaggtggcttctgccttgttgttctcgtgatagcaagtgagttctcaggagatctgatggttttataagtgtttggcaagttcctcctttgcttgctcttctctctctcctgttgccttgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102570603 368 - 106955855 CTGTGTGTTTGTTTACATAAGCTGTTGGTGTGCTGTGACTCCCATCCTCTGTCCACCATAGGTGTGTGATGGAGGATGACAGTCTCTTCAACTGGACAATTCAGAGTAGTTATATGGGGTGAGGGGCGGGCCCAGAGAGGAATAGGGTCtgatatggtttggctttctgtccccacccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattggatcacggaggtggcttctaccttgttgttctcgtgatagcaagtgagttctcaggagatctgatggttttataagtgtttggcaagttcctcctttgcttgctcttctctctctcctgttgccttgtg i nomLeu3.chr10 I 3415 C 0 s rheMac3.chr19 59861260 368 + 64156825 CTGTGTGtttctttacataagctgttggtgtgctgtgagtcccatccTCTGGCCACCACAGGTGTGTGATGAAGGGTGACAGTCTCTTCAACTGGACGATTCAGAGTAGTTATGTGGGGTGAGGGGCGGGCCCAGAGAGGAATAGGGTCtgatatggtttggctttgtgtccccatccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattggatcatggaggtggcgtccaccatgctgttctcgtgatagcaggtgagttctcaggagatctgatggttttataagtgtttggctagctcctcctttgcttgctcttctctctctcctgttgccttgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54878245 368 + 59248254 CTGTGTGtttctttacataagctgttggtgtgctgtgagtcccatccTCTGGCCACCACAGGTGTGTGATGGAGGATGACAGTCTCTTCAACTGGACGATTCAGAGTAGTTATGTGGGGTGAGGGGCGGGCCCAGAGAGGAATAGGGTCtgatatggtttggctttgtgtccccatccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattggatcatggaggtggcgtccaccatgctgttctcgtgatagcaggtgagttctcaggagatctgatggttttataagtgtttggctagctcctcctttgcttgctcttctctctcttctgttgccttgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47001574 368 + 51301725 ctgtgtgtttctttACCTAAGCTGTTGGTGTGCTGTGAGTCCCATCCTCTGGCCACCACAGGTGTGTGATGGAGGATGACAGTCTCTCCAACTGGACGATTCAGAGTAGTTATGTGGGGTGAGGGGCGGGCCCAGAGAGGAATagggtctgatatggtttggctttgtgtccccatccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattggatcatggaggtggcgtccaccatgctgttctcatgatagcaggtgagttctcaggagatctgatggttttataagtgtttggcgAGCTCCTCCTTTGCTTGCTCTTCTCTCGCTCCTgttgccttgtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46714107 368 + 50890351 CTGTGTGtttctttacataagctgttggtgtgctgtgagtcccatccTCTGGCCACCACAGGTGTGTGATGGAGGATGACAGTCTCTTCAACTGGACGATTCAGAGTAGTTATGTGGGGTGAGGGGCGGGCCCAGAGAGGAACAGGGTCtgatatggtttggctttgtgttcccacccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattggatcatggaggtggcgttcaccatgctgttcttgtgatagcaggtgagttctcaggagatctgatggttttataagtgtttggcaagctcctcctttgcttgctcttctctcgctcctgttgccttgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3857028 350 - 49145316 CTGTGTG----TTTACACAAGCTGTTAGTGTGCTGTGGGTCCTGTTTTCCATCCACCATAGGTGGGTGAT---GGATGACAGTCTCTTCAACTGGACAGTTCAGAGTAGTTACATGGGGCGAGGGGCGGGCCCACAGAGGAACAGGGTCtgatatactttggctttatgtccccacccaaatctcatcttgaattgtaatccccaggtgttggggcaggagcctggtaggaggtgattggatcgtggaggaggcttccaccatgctcctctcatgatagca-----------aggagacctgatggttttataagtgtttggcaaggtcctcttttgcttgctcctctctctctcctgctgccttgta i calJac3.chr22 C 0 n 0 a score=115692.000000 s hg38.chr19_GL949747v2_alt 3864 37 + 729520 aagaagatatttgcttctccttccccttctgccatga s panTro4.chr19 58940668 37 + 63644993 aagaagatatttgcttctccttccccttctgccatga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801816 37 + 60714840 aagaagaaatttgcttctccttcgccttctgccatga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102570971 37 - 106955855 aagaagatatttgcttctccttccccttctgtcatga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59861628 37 + 64156825 aagaagatatttgcttctccttccccttctgccatga i rheMac3.chr19 C 0 I 1040 s macFas5.chr19 54878613 37 + 59248254 aagaagatatttgcttctccttccccttctgccatga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47001942 37 + 51301725 aagaagatatttgcttctccttccccttctgccgtga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46714475 37 + 50890351 aagaagatatttgcttctccttccccttctgccatga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45288735 37 + 49145316 aaaaagatacttgcttctctttcctcttttgccatga i calJac3.chr22 I 1294 C 0 a score=858063.000000 s hg38.chr19_GL949747v2_alt 3901 450 + 729520 ctgt-agtttcctgaggccaccctagccatgtggaattgtaagtcaattaaat-------ctctttct------ttt-----------------------------tttttt----------gagactgagccccc--ctgtcatccaggctggtgtgcagtggtgc-aatctcagctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctaccgagtaactgggacaacaggcatgcgcca----------------atagccggctaattttgtatttttagtagaggtggcg-ttcaccatgttgaccaggctagtctcgaactcctaacctcaagtgatccgcc--cacctcagcctcccaaagtgctaagattacaggtgt--gagccaccacacacggcctcggctatttatagcagtgtgagaacgggctaacacaGGGTCTTTCCTCACTGgagagag-agggtgggaggagagagag--agggtgggaggggagagaggggaga-----------g s panTro4.chr19 58940705 470 + 63644993 ctgt-agtttcctgaggccaccctagccatgcggaattgtaagtcaattaaat-------ctcttttt------ttt-----------------------------ttttttt-ttttttttgagactgagccccc--ctgtcatccaggctggtgtgcagtggtgc-aatctcagctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagcctaccgagtaactgggacaacaggcatgcgcca----------------atagctggctaattttgtatttttagtagaggtggcg-ttcaccatgttgaccaggctagtctcgaactcctaacctcaagtgatccgcc--cacctcagcctcccaaagtgctaagattacaggtgt--gagccaccgcacacggcctcggatatttatagcagtgtgagaacgggctaacacaGGGTCTTTCCTCATTGGAgagag-agggtgggaggagagagag--agggtgggaggggggagaggggagaaatgggggagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801853 461 + 60714840 ctgt-agtttcctgaggcctccccagtcacgcggaactgtaagccaattaaac-------ctcttttt------ttg-----------------------------tttgtttgtttgttttgagactgagcctca--ctgtcatcgaggctggggtgcagtggtgc-aatctcagctcgctgcaacctctgcctcccaggttcaagcgattctcctgcctcagcctaccgagtaactgggacaacaggcatgcgccc----------------ataccgggctaattttgtgtttttagtagtgatggagtttcaccatgttgaccaggctagtctcgaactcctgacctcaagtgaaccgcc--cacctcagcctcccaaagtgctcagattacaggtgt--gagccaccacacacggcctcgggtatttatagcagtgtgagaacggactaacacaGGGTCTTTCCCCATTGgagagag-agggtaggaggagagagag--agggtgggaagggagagaggggaga-----------g i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102571008 458 - 106955855 ttgt-agtttcctgaggccaccccagccatgcggaactgtgagtcaatgaaaccatgaaacttttttt------ttt-----------------------------ttttttttttttttttgaaaatgaacctcc--ctgtcatccaggctggagtgcagtggtgcaaatctcaactcactgcaacctttgcctcccaggttcaagcgattctcctgcctcagcctaccgagtaactgggacaacaggcatgcgcta----------------ataccgggctaattttgtatttttagtagagatggcgtttcaccgtgttgaccaggctagtctcgaactcctgacctcaagtgatccgtccacacctcatcctcccaaagtgctaagattacaggcgc--gagccaccacacacagcctcgggtatttacagcagtgtgagaacagactaacacaGGGTCTCTACTCATTGGAGGGAG-AGGGTGGGAAgggaga---------------cggggagacggggag-----------a i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54878650 457 + 59248254 ttgtaagtttcctgaggcctccccagccatgcagaactgtgagtcaattaaac-------ctcttttt-------------------------------------------ttttgttttttgagactgagcctca--ctgtcatgcaggctggagtgcagtggtgc-aatctcagttcactgcaacctccacctcccgggttcaagcgattcttctgcctcagcctactgagtagctgggacaacaggcatgcgcca----------------acaccaggctaattttgtatttttagtagagatggagtttcaccatgttgaccaggctagtctcgaactcctgacctcaagagatccgcc--cacctcagcctcccaaagtgctcagattacaggcgc--aagctaccacactcggcctcggatatttatagcagtgcgagaagggactaacacaGGGTCTTTCCTCATTGgagagagaagggagaaaggggagagagagagggtgggagggaagagaggagaga-----------g i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47001979 469 + 51301725 ttgtaagtttcctgaggcctccccagccatgcagaactgtgagtcaattaaac-------ctcttttt------ttt------------------tgtt-------ttttgttttgttttttgagactgagcctca--ctgtcatgcaggctggattgcagtggtgc-aatctcagttcactgcaacctccacctcccaggttcaagcgattcttctgcctcagcctactgagtagctgggacaacaggcatgcgcca----------------acaccaggctaattttgtatttttagtagagatggagtttcaccatgttgaccaggctagtctcgaactcctgacctcaagagatccgcc--cacctcagcctcccaaagtgctcagattacaggcgc--aAGCTACCACACTCGGCCTGGGATATTTATAGCAGTGCCAGAAGGGACTAACACAGGGTCTTTCCTCAttggggagagaagggagagaggggagagagagagggtgggagggaagagaggggaga-----------g i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 46714512 474 + 50890351 ttgtaagtttcctgaggcctccccagccatgcagaactgtgagtcaattaaac-------ctcttttttttgttttt------------------tgtttt----gttttgttttgctttttgagactgagcctca--ctgtcatgcaagctggagtgcggtggtgc-aatctcagttcactgcaacctccacctcccgggttcaagcgattctcctgcctcagcctactgagtagctgggacaacaggcatgcgcca----------------acaccaggctaattttgtatttttagtagagatggagtttcaccatgttgaccaggctagtctcgaactcctgacctcaagagatccgcc--cacctcagcctcccaaagtgctcagattacaggcgc--aagctaccacacttggcctcggatatttatagcagtgcgagaagggactaacacaGGGTCTTTCCTCATTGgagagag-agggtgggaggggagagag---gggagagaagggagagaggggaga-----------g i chlSab2.chr6 C 0 I 264 s calJac3.chr22 45288772 452 + 49145316 gtgtaagtttcctgagggctctccagccatgcggaactgtgaatgcattaaac-------ctctttcc------ttcataaattacccagtctcaggtttttgtgtgtttgtttggtttttcgagactgagtctcactctgtcacccaggctgcagtgcagtggcac-gatctcagcttgctgcaacctctgcctcccatgttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgtgtaccaccatgcagggctaaccatgccaggctaattttctatttttaatagtgagggagtttcaccatgttgaccaggctggtctcaaactcctaacctcaagtggtccgtc--tacctcggcctcccaga-tgctgggattacaggtgcgagagccaccacacacagtcttgggtatttatggcagcgtgagaatggactagtacaGG-------------GGAGAGAG----------------------------------------------------------- i calJac3.chr22 C 0 C 0 e rheMac3.chr19 59861665 1040 + 64156825 I a score=3479.000000 s hg38.chr19_GL949747v2_alt 4351 9 + 729520 gggagaaat s panTro4.chr19 58941175 9 + 63644993 gggagaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55802314 9 + 60714840 gggagaaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102571466 9 - 106955855 cggggagat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54879109 7 + 59248254 gggagag-- i macFas5.chr19 I 2 I 5 s papAnu2.chr19 47002450 7 + 51301725 ggaagag-- i papAnu2.chr19 I 2 I 454 s calJac3.chr22 45289224 9 + 49145316 AGCAGACCT i calJac3.chr22 C 0 C 0 e chlSab2.chr6 46714986 264 + 50890351 I e rheMac3.chr19 59861665 1040 + 64156825 I a score=12335.000000 s hg38.chr19_GL949747v2_alt 4360 27 + 729520 gggggag-ggggggagaggggggagaga s panTro4.chr19 58941184 28 + 63644993 gggggagcggggggagaggggggagaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55802323 28 + 60714840 gggggaaaggtgggagagcggggagaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102571475 17 - 106955855 gggggag-----------agggaggtga i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54879121 26 + 59248254 gggtggg-ag-ggaagagaggggagaga i macFas5.chr19 I 5 I 293 s papAnu2.chr19 47002911 27 + 51301725 gggagag-agagggagagaggggagagg i papAnu2.chr19 I 454 C 0 s calJac3.chr22 45289233 12 + 49145316 -------------GGGGTAGGGGAG--- i calJac3.chr22 C 0 C 0 e chlSab2.chr6 46714986 264 + 50890351 I e rheMac3.chr19 59861665 1040 + 64156825 I a score=3747.000000 s hg38.chr19_GL949747v2_alt 4387 10 + 729520 gaATGAATAT s panTro4.chr19 58941212 10 + 63644993 gAATGAATAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55802351 10 + 60714840 gAATGAATAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102571492 10 - 106955855 gaatgaatat i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47002938 5 + 51301725 ---tgacG-- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45289245 5 + 49145316 -----AATAT i calJac3.chr22 C 0 C 0 e chlSab2.chr6 46714986 264 + 50890351 I e macFas5.chr19 54879147 293 + 59248254 I e rheMac3.chr19 59861665 1040 + 64156825 I a score=3600.000000 s hg38.chr19_GL949747v2_alt 4397 1 + 729520 G s panTro4.chr19 58941222 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55802361 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102571502 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59862705 1 + 64156825 G i rheMac3.chr19 I 1040 C 0 s macFas5.chr19 54879440 1 + 59248254 g i macFas5.chr19 I 293 C 0 s papAnu2.chr19 47002943 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715250 1 + 50890351 G i chlSab2.chr6 I 264 C 0 s calJac3.chr22 45289250 1 + 49145316 G i calJac3.chr22 C 0 C 0 a score=422431.000000 s hg38.chr19_GL949747v2_alt 4398 132 + 729520 AGAATGAATGTACCAGGAG----CTTTTAtcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagctggaaatgtactgacggatccccaaggattcagtaa--------------tgtgaccaagtggaggag--- s panTro4.chr19 58941223 132 + 63644993 AGAATGAATGTACCAGGAG----CTTTTAtcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagctggaaatgtactgacggatccccaaggattcagtaa--------------tgtgaccgaggtgacgag--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55802362 133 + 60714840 AGAATGAATGTACCAGGAG----CTTTTAtcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagctggaaatgtactgatggatccccaaggattcagtaa-------------TTGTGACCAAGTGGAGGAG--- i ponAbe2.chr19 C 0 I 960 s nomLeu3.chr10 102571503 124 - 106955855 agaatgaATGTACCAGGAG----CGTTTAtcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagctggaaatgtactgacggatctccgagga----------------------tgtgaccaagtggaggag--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59862706 136 + 64156825 AGAATGAATGTACCAGGAGCTGTCTTTTCtcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagccggaaatgtactgatggatccccaaggattcagtaa--------------tgtgaccaagcagaggag--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54879441 136 + 59248254 agaATGAATGTACCAggagctgtcttttctcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagctggaaatgtactgatggatccccaaggattcagtaa--------------tgtgaccaagcagaggag--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47002944 136 + 51301725 AGAATGAATGTACTAGGAGCTGTCTTTTCTCCTTTGCAGGAGCGCCACCTGGAGGTAGGAGGTGAAGTCTGCAGAGAGAAGCTGGAAATGTACTGATGGATCCCCAAGGATTCAGTAA--------------TGTGACCAAGCAGAGGAG--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715251 136 + 50890351 AGAATGAATGTACCAggagctgtcttttctcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagctggaaatgtactgatggatccccaaggattcagtaa--------------tgtgaccaagcagaggag--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45289251 132 + 49145316 GCAATGA----ACCAGGAGCTGTCTTTTATCCTTAGcaggagcgccacctggaggtaggaggtgaagtctgccgcgagaagctggaaatggactgacagatccccaagggttcagtaa--------------cgtgaccaaggagtggag--- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19456713 143 - 122678785 AGAATGAATGAATCAGGT-----CTTTCTTGCTTTCCACCAGCGCCACCTGGAGGTGGAAGGTGAGCCCCGCAGAGAG--GCTGGAACTGTACAGATGGA-CCCCACAGACAGAGCAAGCCAACCTTCCAGCTGTG--CAGCTGGAGGAGGGA i canFam3.chr1 N 0 C 0 a score=506927.000000 s hg38.chr19_GL949747v2_alt 4530 194 + 729520 ctgcattt-------------------acaggca------------tcaaggg-aactgcaggtgagaggtctgcagcCT------TGCAAGAGAGTGG--GGGAAGCAGGAGAAGCTCCACGTGG--GGAGATAAAGGAAAAGCTGACCACGCTTCCTCCACGTTGCAGGCAACCTGCCGAAAGGattttaatcactgagctgacactgtatttttttcttgtatgtgacttttt s panTro4.chr19 58941355 194 + 63644993 ctgcattt-------------------acaggca------------tcaaggg-aactgcaggtgagagatctgcagcCT------TGCAACAGAGTAG--GGGAAGCAGGAGAATCTCCACGTGG--GTAGATAAAGGAAAAGCTGACCACGCTTCCTCCACGTTGCAGGCAACCTGCCAAAAGGattttaatcactgagctgacactgtatttttttcttgtatgtgacttttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102571627 195 - 106955855 ctgcattt-------------------acaggca------------tcgagggaaactgcaggtgagagatctgcagcCT------TGCAAGAGAGTGG--GGGAAGCAGGAGAAGCTCCACGTGA--GGAGATAAAGGAAAAGCTGACCACGCTTCCTCCACGTTGCAGGCAACCTGCCAAAAGGattttaattactgagctgacactgtatttttttcttgtatgtgacttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59862842 194 + 64156825 ctgcgttt-------------------acaggca------------tcagggg-aaccgcaggtgagagatctgcagcCT------TGCAAGAGAGTGG--GGGAAGGGGGAGAAGCTCCACATGT--GGAGATAAAGGAAAAGCTGACCACACTCCCTCCACGTTGCAGGCAACCTGCCAAAAGGATTTTAATTACTGAGCTGACACTATATTTTTTTCTTGTATGTGACTTTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54879577 194 + 59248254 ctgcgttt-------------------acaggca------------tcagggg-aactgcaggtgagagatctgcagcCT------TGCAAGAGAGTGG--GGGAAGCGGGAGAAGCTCCACATGT--GGAGATAAAGGAAAAGCTGACCACGCTCCCTCCACGTTGCAGGCAACCTGCCATAAGGATTTTAATTACTGAGCTGACACTATATTTTTTTCTTGTATGTGACTTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47003080 194 + 51301725 CTGCGTTT-------------------ACAGGCA------------TCAGGGG-AACTGCAGGTGAGAGATCTGCAGCCT------TGCAAGAGAGTGG--GGGAAGCGGGAGAAGCTCCACATGG--GGAGATAAAGGAAAAGCTGACCACGCTCCCTCCACGTTGCAGGCAACCTGCCAAAAGGATTTTAATTACTGAGCTGACACTATACTTTTTTCTTGTATGTGACTTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715387 194 + 50890351 ctgcgttt-------------------acaggca------------tcagggg-aactgcaggtgagagatccgcagcct------tgcgagagagTGG--GGGAAGCGGGAGAAGCTCCACATGG--GGAGATAAAGGAAAAGCTGACCATGCTCCCTCCACCTTGCAGGCAACCTGCCAAAAAGATTTTAATTACTAAGCTGACACTGTATTTTTTTCTTGTATGTGACTTTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45289383 200 + 49145316 ttgccttt-------------------gcaggca------------ccagagg-aactgcaggtgagacatctgcggcCTTATGAGTGTGAGAGGGTGG--GGGAAGCAGGAGGAGCTCCACGTGG--GGAGATAAAGAAAAAGCTGACCACGCTCCCTCTAAGTTGCAGGCAACCTGCCAAAAGCATTTTAATTACTGAGCTGACACTGTATTTTTTTCTTGTATGTAACttttt i calJac3.chr22 C 0 I 312 s canFam3.chr1 19456856 209 - 122678785 CTGCAGGTGAGAACTGTGGGGGAGGGGAGAGGGAGAAGGGTGGAGTCCAGGGG-GACTGCAGGTGAGAA--CTGTGGCCT-----------GGGGATGGCAGGGGAGGAGCAGAAGTTCCAAGTGGGAGGAAATAAAGAAAAAGCTGACCATGCTCACTGCA-GCTGCAGGCAACCTGCCAAAAGcatttcaattactgaac--------tatttttcccttgcatgtgact---- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55802495 960 + 60714840 I a score=85137.000000 s hg38.chr19_GL949747v2_alt 4724 32 + 729520 taagaagcagctgg-aagtctttatgacctaag s panTro4.chr19 58941549 32 + 63644993 taagaagcagctgg-aagtctttatgacctaag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102571822 32 - 106955855 taagaagcagctgg-aagtctttatgacctaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59863036 33 + 64156825 TAAGAAGCAGCTGGAAAGTCTTTATGACCTAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54879771 33 + 59248254 TAAGAAGCAGCTGGAAAGTCTTTATGACCTAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47003274 32 + 51301725 TAAGAAGCAGCTGG-AAGTCTTTATGACCTAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715581 32 + 50890351 AAAGAAGCAGCTGG-AAGTCTTTATGACCTAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45289895 32 + 49145316 TAAGAAGCAGCTGA-AAGTCTTTATGACCTAAG i calJac3.chr22 I 312 C 0 s canFam3.chr1 19457065 24 - 122678785 --------aattgg-acacctttattacctaag i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55802495 960 + 60714840 I a score=530979.000000 s hg38.chr19_GL949747v2_alt 4756 225 + 729520 atgactataaaaattatgagaaggccgggcgcagtggctcacacctgtaatcctagcac-tttgggaggccaaggtgggcggatcacttaaggtcagga-gttcgagaccagcctggccaacatggcgaaaccctgtctctactaaaaat-acaaaaattagctgggcgtggtagcacatgcttgtaatcccagctgctcgggaggctgaggcaggagaatcacttga s panTro4.chr19 58941581 225 + 63644993 atgactataaaaattatgagaaggccgggcgcagtggctcacgcctgtaatcctagcac-tttgggaggccaaggtgggcggatcacttaaggtcagga-gttcaagaccagcctggccaacatggcgaaaccctgtctctactaaaaat-acaaaaattagctgggcgtggtagcacatgcttgtaatcccagctgctcgggaggctgaggcaggagaatcacttga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102571854 227 - 106955855 acgactataaaaattatgagaaggccgggcgcagtggctcacacctgtaatcctagcacttttgggaggccaaggtgggcggatcacttaaggtcaggattttcaagaccatcctgtctaactgggcgaaaccctgtctctactaaaaat-acaaaaattagctgggcgtggaagcacatgcttgtaatcccagctgctcgggaggctgaggcaggagaatcacttga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59863069 225 + 64156825 ATGACTATAAAAATTATGAGAAggccaggcgcagtggctcacgcctataatcccagcac-tttgggaggccaaggtgggcggatcacttaaggtcagga-gttcgagaccagcctggccaacatgacaaaaccctgtctctgctaaaaat-acaaaaattagctgggtgtggtagcacatgcctgtaatcccagctgctcgggagactgaggcaggagaatcacttga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54879804 225 + 59248254 ATGACTATAAAAATTATGAGAAggccaggcgcagtggctcacgcctataatcccagcac-tttgggaggccaaggtgggcggatcacttaaggtcagga-gttcgagaccagcctggccaacatggcaaaaccctgtctctgctaaaaat-acaaaaattagctgggtgtggtagcacatgcctgtaatcccagctgctcgggagactgaggcaggagaatcacttga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47003306 225 + 51301725 ATGACTATAAAAATTATGagaaagccaggcgcggtggctcacgcctataatcccagcac-tttgggaggccaaggtgggcggatcacttaaggtcagga-gttcgagaccagcctggccaacatggcaaaaccctgtctctactaaaaat-acaaaaattagctgggtgtggtagcacatgcctgtaatcccagctgctcgggagactgaggcaggagaatcacttga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715613 226 + 50890351 ATGACTATAAAAATTATAAGAAggccgggcgcggtggctcacgcctgtaatcctagcac-tttgggaggccaaggtgggcagatcacttaaggtcagga-gttcaagaccagcctggccaacatggcaaaaccctgtctctactaaaaataacaaaaattagctgggtgtggtagcacatgcctgtaatcccagctgctcgggaggctgaggcaggagaattgcttga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45289927 225 + 49145316 ATGACTATAAAAATTATGAGAAGTccaggcacgatggctgatgcctgtaaccccagcgc-tttgggaggccaaggtgtgtggatcatttgaggtcagga-gttcaagaccagcctggccaacgtggtaaatctccgtctctactaaaaac-acaaaacttagctgggcgtggtggctcatgcctataattccagatgctcgggagactgaggcaggagaattacttga i calJac3.chr22 C 0 C 0 e canFam3.chr1 19457089 0 - 122678785 C e ponAbe2.chr19 55802495 960 + 60714840 I a score=53009.000000 s hg38.chr19_GL949747v2_alt 4981 28 + 729520 acctgggaggcagaggttgcagtgaacc s panTro4.chr19 58941806 28 + 63644993 acctgggaggcagaggttgcagtgaacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55803455 28 + 60714840 acctgggaggcagaggttgcagtgaatc i ponAbe2.chr19 I 960 C 0 s nomLeu3.chr10 102572081 28 - 106955855 atctgggtggcagaggttgcagtgaacc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59863294 21 + 64156825 acctgggaagcag-------agtgagcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54880029 21 + 59248254 acctgggaagcag-------agtgagcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47003531 20 + 51301725 acct-gcaagcag-------agtgagcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715839 28 + 50890351 acctgggaggcagaggttgcagtgagcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45290152 28 + 49145316 aaccaggaggcagaggttgcagtgagct i calJac3.chr22 C 0 C 0 e canFam3.chr1 19457089 0 - 122678785 C a score=1230016.000000 s hg38.chr19_GL949747v2_alt 5009 407 + 729520 atgactgcaccatagcactccaggctgggcaacagagcaagactgtctc---------------------------------------aaaaaaaaaaaaagttatgagacttgctttacatgtcacccaagggcacaggtaaagaattagacctaggagttgggt-tgatagggcaatgggaa------aaaagaaaaaaattgtttactg-aATCAAGGGAATAATCACACCTACATCTTTGCAACTCACGTGCTTACAACtag---ggcaaccaaatt-----gttccggttcgcccaggattttctctggtttagccctgaaatttctgtgtcctgggaaattcctcaTTTCTATTTTAAAACCGAAAGTCCCACATCCTAAG--------ACACACACACACGCCCCTGCACACACCAATCCTGGTAAAACGGTAAC-AGTTGGTCATACTATCTACAACAACCCT s panTro4.chr19 58941834 407 + 63644993 atgattgcaccatagcactccagcctgggcaacagagcaagactgtctc---------------------------------------aaaaaaaaaaaaagttatgagacttgctttagatgtcacccaagggcacaggtaaagaattagacctaggagttgggt-tgatagggcaatgggaa------aaaagaaaaaaattgtttactg-aATCAAGGGAATAATCACACCTACATCTTTGCAACTCACGTGCTTACAACtag---ggcaaccaaatt-----gttccggttcgcccaggattttctctggtttagccctgaaatttctgtgtcctgggaaattcctcatttcTATTTTAAAACCGAAAGTCCCACATCCTAAG--------ACACACACACACGCCCCTGCACACACCAATCCTGGTAAAACGGTAAC-AGTTGGTCATGCTATCTACAACAACCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55803483 419 + 60714840 atcattgcaccacagcactccagcctgggcaacggagcaagactgtctcaa------------------------------aaaaaaaaaaaaaaaaaaaaGTTATGAGACTTGCTTTAGATGTCACCCAAGGGCACAGGTAAAGAATTAGACCTAGGAGTTGGGTATGATAGGGCAATGGGGG------AAAAGAAAAAAATTGTTTACTG-AATCAAGGGAATAATCACACCTCCATCTTTACAACTCACGTGCTTACAACtag---ggcaaccaaatt-----gttccggtttgcccaggattttctctggtttagccctgaaatttctgtgtcctgggaaattcctcaTTTCTATTTTAAAACTGAAAGTCCCACATCCTAAG------ACACACACACACACGCCCCTGCACACACCAATCCTGGTAAAACGGGAAC-AGTTGGTCATACTATCTACAACAACCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102572109 416 - 106955855 atgattgcaccacagcactccagcctgggcaacagagcaagactgtccc--------------------------------ccacaaaaaaaaaaaaaaaagttatgagacttgctttagatgtcacccaagggcacaggtaaagaattagacctaggagttgggtatgatagggcaatggggg------aaaag-aaaaaattgtttactg-aATCAAGGGAATAATCACACCTACATCTTTGCAACTCACGTGCTTACAACtag---ggcaaccaaatt-----gttccggttcgcccaggattttctctggtttagccctgaaatttctgtgtcctgggaaattcctcaTTTCTATTTTAAAACCGAAAGTCCCACATCCTAAG------ACACATAAACACACGCCCCTGCACACACCAATCCTGGTAAAACGGGAAC-AGTTGGTCATACTATCTacaacaaccct i nomLeu3.chr10 C 0 I 822 s rheMac3.chr19 59863315 447 + 64156825 atgactgcaccactgcactgcagcctgggcgacagagcaagactgtctcgaaaaaaaacaaaaaacaaaaa-aaaaaaaaaaaaaGGAAAAGAAAAAAGAAAATTTGAGACTTGCTTTAGATGTCGCCCAAGGGCACAGGTAAAGAATTAGATCTAGGAGTTGGGTGTGATAGGGCAATGGGGG------AAAAGAAAAACATTGTTTACTGAAATCAAGGGAATAATCACACCTGCATCTTTACAACTCATGTGCTTACAACtag---ggcaaccaaatt-----gttctggtttgcccaggattttctctggtttagccctgaaatgtctgtgtcctgggaaattcctcaTTTCTATTTTAAAACCGAAAGTCCCACATCCTAAG--------ACACACACACACGCCCCTGCACACACCAATCCTGGTAAAGCAGAGAC-AGTTGGTCATACTATCCACAACAACCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54880050 448 + 59248254 atgactgcaccactgcattgcagcctgggcgacagagcaagactgtctcaaaaaaaaaacaaaaacaaaaacagaaaaaaaaaAAGGAAAAGAAAAAAGAAAATTTGAGACTTGCTTTAGATGTCGCCCAAGGGCACAGGTAAAGAATTAGATCTAGGAGTTGGGTGTGATAGGGCAATGGGGG------AAAAGAAAAACATTGTTTACTGAAATCAAGGGAATAATCACACCTGCATCTTTACAACTCATGTGCTTACAACtag---ggcaaccaaatt-----gttctggtttgcccaggattttctctggtttagccctgaaatgtctgtgtcctgggaaattcctcatttcTATTTTAAAACCGAAAGTCCCACATCCTAAG--------ACACACACACACGCCCCTGCACACACCAATCCTGGTAAAGCAGAGAC-AGTTGGTCATACTATCCACAACAACCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47003551 433 + 51301725 atgactgcaccactgcactgcagcctgggcgacagagcaagactgtctcaa---------------------aaaaaaccaaaaaaaaaaagaaaaaaaaatttatgagacTTGCTTTAGATGTCGCCCAAGGGCACAGGTAAAGAATTAGATCTAGGAGTTGGGTGTGATAGGGcaatggggg------aaaagaaaaacattgtttaCTGAAATCAAGGGAATAATCACACCTGCATCTTTACAACTC--GTGCTTACAACTAG---GGCAACCAAATT-----GTTCTGGTTTGCCCAGGATTTTCTCTGGTTTAGCCCTGAAATGTCTGTGTCCTGGGAAATtcctcatttctattttaaaaccgAAAGTCCCACAtcctaagacacacacacacacacacacgccccagCACACACCAATCCTGGTAAAGCAGAGAC-AGTTGGTCATACTATCCACAACAACCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715867 454 + 50890351 atgactgcaccactgcactgcagcctggacaacagagcaagactgtctcaaaaaaaaaaaaaaaagaaagaaagaaaagaaaagaaaagaaaaaaagaaaaTTTATGAGACTTGCTTTAGATGTTGCCCAAGGGCACAGGTAAAGAATTAGATCTAGGAGTTGGATGTGATAGGGCAATGGGGG------AAAAGAAAAACATTGTTTACTGAAATCAAGGGAATAATCACACCTGCATCTTTACAACTCATGTGCTTACAACtag---ggcaaccaaatt-----gttctggttcgcccgggattttctctggtttagccctgaaatgtctgtgtcctgggaaattcctcatttcTATTTTAAAACTGAAAGTCCCACATCCTAAG--acacatacacacacacacgcccctgcacacaccacTCCTGGTAAAGCAGAGAC-AGTTGGTCATACTATCTACAACAACCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45290180 406 + 49145316 gtgattgcgccacagcactctagcctgggcaacagagcaagactatctt----------------------------------------aaaaaaaaaaaaaTTATGAGACTTGCTTTAGATGTTGCCCAAGGGCACAGGTAAAGAATTAGACCTGGGAGGTGGGTATGATAGGGTAATGGGGG------AAAAGAAAAAAACTGTTTACTG-AATCTATGGAATAATCACACCT-CATCTTTATAACTCATGTGCTTACAACCag---ggcaaccaaact-----gttccggtttgcccaggattttctctggtttagtcctgaaatttctgtgtcctgggaaatccctcaTTTCTATTTTAAAACTCAAAGTCCCACATCCTAAG--------ACAAACACACACGCCCCTGCACACACCAGTCCTGGTAAAACGGAAAC-AGTTGGTCATACTATCTACAGCAACCTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19457089 297 - 122678785 -----------------------------------------------------------------------------------------atgactatgaagggcatgaggcttgcgttagatgttccccaggggcacaggtaaagaaTGAGACCTGTGAGGCAAGTGTGGGAGGGTAAGGGGGGGGGTGCGGGAGGAAAA-------------AGCCATCGTACTTATCACCCCC----CCTTACAGCTCCTACGCTTACAATGAAGATGACAAACAAACTCACTCATTCCTGTTTGCCCAAGGCTTTCTCAATTTTAGC-----------------------------------------------------TCCCACATGGAGGG--------GCA---GCCCCCGCCTCAG----TCCCAGTCCTGGGAAAATGGGGATGGGGGGGTCCTACTGCTGGCAACAACCCC i canFam3.chr1 C 0 C 0 a score=358160.000000 s hg38.chr19_GL949747v2_alt 5416 125 + 729520 ATTCGAGATCTGTGTCT-T--CACGATGAGGAAAGGCACAT-GCAGTTCTGGAGATTTTAACACGTGTTCCCAAGG-TCACACAACCTGCCCTTGTATCCAGCA----CTGAAAGCAGATGACTCTCCTCTTTC s panTro4.chr19 58942241 125 + 63644993 ATTCGAGATCTGTGTCT-T--CATGATGAGGAAAGGCACAT-GCAGTTCTGGAGATTTTAACACGTGTTCCCAAGG-TCACACAACCTGCCCTTGTATCCAGCA----CTGAAAGCAGGTGACTCTCCTCTTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55803902 123 + 60714840 ATTCGAGATCTGTGTCT-C--CACGATGAGGAAAGG--TAT-GGAGTTCTGGAGATTTTAACACATGTTCCCAAGG-TCACACCACCTGCCCTTGTATCCAACA----CTGAAAGCAGAGGACTCTCCTCTTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102573347 123 - 106955855 ATTCGAGATCTGTGTCT-C--CACGATGAGGAAAGG--CAT-GGAGTTCTGGAGATTTTAACACATGTTCCCAAGG-TCACACAACCTGCCCTTGTATCCAACA----CTGAAAGCAGATGACTCTCCTCTTTC i nomLeu3.chr10 I 822 C 0 s rheMac3.chr19 59863762 124 + 64156825 ATTCGAGATCTGTGTCT-C--CACCATGAGGAAAGG--CATGGGAGTTCTGGAGATTTTAACACATGTTCCCAAGG-TCATACCACCTGCCCTTGTATCCAAAA----CGGAAAGCAGACGACTCTCCTCTTTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54880498 124 + 59248254 ATTCGAGATCTGTGTCT-C--CACCATGAGGAAAGG--CATGGGAGTTCTGGAGATTTTAACACATGTTCCCAAGG-TCATACCACCTGCCCTTATATCCAAAA----CGGAAAGCAGACGACTCTCCTCTTTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47003984 125 + 51301725 ATTCGAGATCTGTGTCTCC--CACCATGAGGAAAGG--CATGGGAGTTCTGGAGATTTTAACACATGTTCCCAAGG-TCATATCACCTGCCCTTATATCTGACA----TGGAAAGCAGACGACTCTCCTCTTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46716321 124 + 50890351 ATTCGAGATCTGTGTCT-C--CACCATGAGGAAAGG--TATGGGAGTTCTGGAGATTTTAACACATGTTCCCAAGG-TCATGCAACCTGCCCTTATATGCAACA----CGGAAAGCAGACGACTCTCCTCTTTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45290586 121 + 49145316 ATTCGAGATC--TTTCT-C--CACCATGAGGAAGGG--CAT-GCAGTTCTGCAGATTTTAACACATGTTCCCAAGG-TCACGCAACCTGGCTCTGTATCCAACG----CTGAAAGCAGACAACGCTCCtttttt i calJac3.chr22 C 0 I 294 s canFam3.chr1 19457386 120 - 122678785 ATCAGATATCTGTCTCT-CTTTATGGTGATGA------CAC-GGAGTCCTGGCAATTTTAAGAAATCTTCCTTAGGTTCACGTAACCTGGACGTATTTCCAGTGCCATCTGAAAACAAAGGACACCCC------ i canFam3.chr1 C 0 C 0 a score=198311.000000 s hg38.chr19_GL949747v2_alt 5541 65 + 729520 CACGATTCTAAGCCTCTTCCCGTAGCATGTCCCATGTGGAGGAGAAAAGTTAAGAAAATGAAACT s panTro4.chr19 58942366 65 + 63644993 CACGATTCTAAGCCTCTTCCCGTAGCATGCCCCATGTGGAAGAGAAAAGTTAAGAAAATGAAACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55804025 65 + 60714840 CACGATTCTAAGCCTCTTTCCCCAGCATGTCCCATGTGGAAGAGAAAAGTTAAGAAAATGAAACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102573470 60 - 106955855 CGCGATTCTAAGCCTCTTCCCCCAGCATGTCCCATGTG-----GAAATGTTAAGAAAATGCAACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59863886 65 + 64156825 CACGATTCTAAGCCTCTTCCCCCAGCATGTCCCATGTGGAAGATGAAAGTTAAGAAAATGAAACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54880622 65 + 59248254 CACGATTCTAAGCCTCTTCCCCCAGCATGTCCCATGTGGAAGATGAAAGTTAAGAAAATGAAACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47004109 65 + 51301725 CACAATTctaagcctcttcccccagcaTGTCCCATGTGGAAGATgaaagttaagaaaatgaaact i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46716445 65 + 50890351 CACAATTCTAAGCCTCTTCCCCCAGCATGTCCCATGTGGAAGATAAAAGTTAAGAAAATGAAACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45291001 65 + 49145316 CACAGTTCTAGGTTTCTTCCCCCAGCATTTCCTGTGTGGAAAAGAAaagttaagaaaatgaaact i calJac3.chr22 I 294 I 1315 s canFam3.chr1 19457506 50 - 122678785 ---------------CTTTCCACAGCTTGCCCCACATGGAAGACATAAGTTAGGAAAACAGCCAT i canFam3.chr1 C 0 C 0 a score=111311.000000 s hg38.chr19_GL949747v2_alt 5606 40 + 729520 GGCCAAAACTTGCTACTGCATTTGTGATTTTAGAAAGTAA s panTro4.chr19 58942431 40 + 63644993 GGCCAAAACTTGCTACTGCATTTGTGATTTTAGAAAGTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55804090 40 + 60714840 GGCCAAAACTTGCTACTGCATTTGTGATTTTAGAAAGTAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102573530 40 - 106955855 GGCCAAAACTTGCTACTGCATTTGTGATTTTAGAAAGTAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59863951 40 + 64156825 GGCCAAAACTTGCTACTGCATTTGTGATTTTAGAAAGTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54880687 40 + 59248254 GGCCAAAACTTGCTACTGCATTTGTGATTTTAGAAAGTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47004174 40 + 51301725 ggCCAAAACTTGCTACTGCGTTTGTGATTTTAGAAAGTGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46716510 40 + 50890351 GGCCAAAACTTGATGCTGCATTTGTGATTTTAGAAAGTAA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19457556 39 - 122678785 GGGAGACCCTCACTACTGCATTTG-GAAATTAGAAAATAA i canFam3.chr1 C 0 I 38 e calJac3.chr22 45291066 1315 + 49145316 I a score=1242277.000000 s hg38.chr19_GL949747v2_alt 5646 556 + 729520 ATGATCAGACATTATTAAAATTATCAATGCAAAAAGAAAGTGAGACTGAACAGATTGTTTACCTTAACAAGATCAAGTTAAACTCGTATAGGGCTTATATATAATGCCGCTTAAAAGCTCAAGTTTATGCGGGGCAGTTTTGGTGGAAGAAGCTCAGGCAGTCCCTCTGGTGGTCGTTATAGATCTGGCCG-TGGAACTGGTGGATATGAAAACAGAAGGTTCTAAAAACAGCAGAAAAGGGCAACAGTTCTTAGCAGGAGAGACAGTG----------AGGAAAGCTGCAGGTTACTTGGAGACAGTCATCCCAAATGCATTAGAGGAGGTGTAAAAATCTGCCACAGAAGGAACAATGATCCATAGTCAG-AAAAGTTACTGCAGCTTAAGCAGGAAACCCTTCTTGTTCAGGACTGTCATAGCCACAGTTTGCAAAAAGTGCAGCTATTGATTAATGTGATGTAGTGTCAATTAGAGGTACATCCCTGAGGTCTTT----------------AAAACAAA-ACAAACTCAgccaggcacggtggctcacacctgtaatcccagtgctttgggaagctgaggc s panTro4.chr19 58942471 554 + 63644993 ATGATCAGACATTATTAAAATTATCAATGCAAAAAGAAAGTGAGACGGAACGGATTGTTTACCTTAACAAGATCAAGTTAAACTTGTATAGGGCTTATATATAACGCCGCTTAAAAGCTCAAGTTTATGCGGGGCAGTTTTGGTGGAAGAAGCTCAGGCAGTCCCTCTGGTGGTCGTTATAGATCTGGCCG-TGGAACTGGTGGATATGAAAACAGAAGGTTCTAAAAACAGCAGAAAAGGGCAACAGTTCTTAGCAGGAGAGACAGTG----------AGGAAAGCTGCAGGTTACTTGGAGACAGTCGTCCCAAATGCATTCGAGGAGGTGTAAAAATCTGCCACAGAAGGAACAATGATCCATAGTCAG-AAAAGTTACTGCAGCTTAAGCAGGAAACCCTTCTTGTTCAGGACTGTCATAGC--CAGTTTGCAAAAAGTGCAGCTATTGATTAATGTGATATAGTGTCAATTAGAGGTACATCCCTGAGGTCTTT----------------AAAACAAA-ACAAACTCAgccaggcacagtggctcacacctgtaatcccagcgctttgggaagctgaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55804130 558 + 60714840 ATGATCAGACATTATTAAAATTATCAATGCAAAAAGAAAGTGAGACTGAACGGATTGTTTACCTT---AAGATCAAGTTAAACTTGTATAGGGCTTATATATAATGCCGCTTAAAAGCTCAAGTTTATGGGGGGCAGTTTTGGTGGAAGAAGCTCAGGCAGTCCCTCTGGTGGTCGTTATGGATCTGGCGG-TGGAACTGGTAGATATGAAAACAGAAGGTTCTAAAAACAGCAGAAAAGGGCTACAGTTCTTAGCAGGAGAGACAGTG----------GGGAAAGCTGCAGGTTACTTGGAGACAGTCTTCCCAAATGCATTAGAGGAGCTGTAAAAATCTGCCACAGAAGGAACAATGATCCATAGTCAG-AAAAGTTACTGCAGCTTAAGCTGGAAACCCTTCTTGTTCAGGACTGTTGTAGCCACAGTTTGCAAAAAGTGCAGCTATTGATTAATGTGATGTAGTGTCAGTTAGATGTACATCCCTGAAGTCTTTAAAAC-----------AAAACAAA-ACAAACTCagccaggtgcggtggctcacacctgtaatcccagagctttgggaggctgaggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102573570 572 - 106955855 ATGATCAGACATTATTAAAATTATCAGTGCAAAAAGAAAGTGAGACTGAACGGATTGTTTATCTTAACAAGATCAAGTTAAACTTGTACAGGGCTTATATATAATGCCGCTTAAAAGCTCAAGTTTATGGGGGGCAGTTTTGGTGGAAGAAGCTCAGGCAGTCCCTCTGGTGGTCGTTATGGATCTGACGG-TGGAACTGGTGGATATGAAAACAGAAGGTTCTAAAAACAGCAGAAAAGGGCTACAGTTCTTAGCAGGAGAGACAGTGAGGAGTTGTCAGGAAAGCTGCAGGTTACTTGGAGACAGTCGTCCCAAATGCATTAGAGGAGGTGTAAAAATCTGCCACAGAAGGAACAATGATCCGTAGTCAGAAAAAGTTACTGCAGCTTAAGGAGGAAACCCTTCTTGTTCAGGACTGTCATAGCCACAGTTTGCAAAAAGTGCAGCTATTGATTAATGTGATGTAGTGTCAATTAGACGTACATCCCTGAGGTCTTTAAAAC-----------AAAACAAA-ACAAACTCAgccaggcacagtggctcacacctgtaatcccagtgctttgggaggcctaggc i nomLeu3.chr10 C 0 I 136 s rheMac3.chr19 59863991 551 + 64156825 ATGATCAGACAGTATTAACATTATCAATGCAAAAAGAAAGTGAGACTGAACGGATTGTTTACCTTAACATGATCAAGTTAAACTTGTATAGGGCTTAAATATAATGCTGCTTAAAAGCTCAAGTTTATGGGGGGCAGTTTTGGTGGAAGAAACTCAGGCAGTCCCTCTGGTGGTCGTTACGGATGTGGCAG-TGGAAGTAATGGATAC--------------------------------GGCTACAGTTCTTAGCAGGAGAGACAGTGAGGAGTTGTGAGGAAAGTTGCAGGTTACTTGGAGACAGTCGTCCCAAATGCATTAGAGGAACTGTAAAAATCTGCCACAGAAGGAACGATGATCCATAGTCAG-AAAAGTTACTGCCGCTGAAGCAGGAAACCCTTCTTGTGCAGGACTGTCATAGCCACAGTTTGCAAAAAGTGCAGCTGTTGATTAATGTGATGTAGTGTCAATTAGATGTACATCCCTGAGGTCTTAAAAAACAAAAACAACAACAACAAAAAAAAACTCATccaggcacggtggctcacgcctgtaatcccggcgctttgggaggccgaggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54880727 551 + 59248254 ATGATCAGACAGTATTAACATTATCAATGCAAAAAGAAAGTGAGACTGAACGGATTGTTTACCTTAACATGATCAAGTTAAACTTGTATAGGGCTTAAATATAATGCTGCTTAAAAGCTCAAGTTTATGGGGGGCAGTTTTGGTGGAAGAAACTCAGGCAGTCCCTCTGGTGGTCGTTACGGATGTGGCAG-TGGAAGTAATGGATAC--------------------------------GGCTACAGTTCTTAGCAGGAGAGGCAGTGAGGAGTTGTGAGGAAAGTTGCAGGTTACTTGGAGACAGTCGTCCCAAATGCATTAGAGGAACTGTAAAAATCTGCCACAGAAGGAACGATGATCCATAGTCAG-AAAAGTTACTGCCGCTGAAGCAGGAAACCGTTCTTGTGCAGGACTGTCATAGCCACAGTTTGCAAAAAGTGCAGCTGTTGATCAATGTGATGTAGTGTCAATTAGATGTACATCCCTGAGGTCTTAaaaaacaaaaacaacaacaacaacaaaaaACTCATccaggcacggtggctcacgcctgtaatcccagcgctttgggaggccgaggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47004214 582 + 51301725 ATGATCAGACAGTATTAACATTATCAATGCAAAAAGAAAGTGAGACTGAACAGATTGTTTACCTTAACGTGATCAAGTTAAACTTGTATAGGGCTTAAATATAATGCTGCTTAAAAGCTCAAGTTTATGGGGGGCAGTTTTGGTGGAAGAAACTCAGGCAGTCCCTCTGGTGGTCGTTAGGGATGTGGCAG-TGGAAGTGATGGATACAGTAACAGAAGGTTCTAAACACAACAGAAAAGGGCTACAGTTCTTAGCAGGAGAGACAGTGAGGAGTTGTGAGGAAAGCTGCAGGTTACTTGGAGACAGTCGTCCCAAATGCATGAGAGGAACTGTAAAAATCTGCCACAGAAGGAACGATGATCCATAGTCAG-AAAAGTTACTGCCGCTGAAGCAGGAAACCCTTCTTGTGCAGGACTGTCATAGCCACAGTTTGCAAAAAGTGCAGCTGTTGATTAATGTGATGTAGTGTCAATTAGATGTACATCCCTGAggtcttaaacaacaacaacaacaacaacaac-aaaaactcatccaggcacggtggctcacgcctgtaatcccagcgctttgggaggccgaggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46716550 583 + 50890351 ATGATCAGACAGTATTAACATTATCAATGCAAAAAGAAAGTGAGACTGAACGGATTGTTTACCTTAACATGATCAAGTTAAACTTGTATAGGGCTTAAATATAATGCTGCTTAAAAGCTCAGGTTTATCGGGGGCAGTTTTGGTGGAAGAAACTCAGGCAGTCCCTCTGGTGGTCGTTACGGATGTGGCAGTTGGAAGTGATGGATATGGTAACAGAAGGTTCTAAAAACAACAGAAAAGGGCTACGGTTCTTAGCAGGAGAGACAGTGAGGAGTTGTGAGGAAAGCTGCAGGTTACTTGGAGACAGTAGTTCCAAATGCGTTAGAGGAACTGTAAAAATCTGCCACGGAAGGAACGATGATCCATAGTCAG-AAAAGTTACTGCCGCTGAAGCAGGAAACCCTTCTTGTTCAGGACTGTCATAGCCACAGTTTGCAAAAACTGCAGCTGTTGATTAATGTGATGTAATGTCAGTTAGATGTACATCCCTGAGGTCTTaaaaacaaaaaacaaaaaacaaaaa-aaaaCCTCATccaggcatggtggctcacgcctgtaatcccagcgctttgggaggccgaggg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I a score=195419.000000 s hg38.chr19_GL949747v2_alt 6202 83 + 729520 aggcagatcacctgaggctgggagattgagaccagcctggctaacatggtgaaaccccgtctctacgaaaaatacaaaaatta s panTro4.chr19 58943025 83 + 63644993 gggcagatcacctgaggctgggagattgagaccagcctggctaacatggtgaaaccccgtctctactaaaaatacaaaaattg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55804688 83 + 60714840 gagcagatcacctgaggctggaagttggagaccagcctggctaacatggtgaaatcctgatgctactaaaaatacaaaaatta i ponAbe2.chr19 C 0 I 132 s nomLeu3.chr10 102574278 83 - 106955855 gggcagatcacctgaggctgggagtttgagaccagcctggctaacatggtgaaaccccgtctctactaaaaatataaaaatta i nomLeu3.chr10 I 136 C 0 s rheMac3.chr19 59864542 83 + 64156825 gggcagatcacctgaggctgggagttggagaccagcctctctaacatggtgaaaccctgtctctactaaaaatacaaaaatta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54881278 83 + 59248254 gggcagatcacctgaggctgggagttggagaccagcctcgctaacatggtgaaaccctgtctctactaaaaatacaaaaatta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47004796 83 + 51301725 gggcagatcacctgaggctgggagttggagaccagcctcgctaacatggtgaaaccctgtctctactaaaaatacaaaaatta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46717133 83 + 50890351 gggcagatcacctgaggccaggagttggagaccaacctggctaacatggtgaaaccctgtctctactaaaaatacaaaaatta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I a score=301035.000000 s hg38.chr19_GL949747v2_alt 6285 171 + 729520 gcccggcatggtggtgggcgcctgtaatccc----agctactcaggaggctaaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagccaagatcgtgccactgcactccagcctgggtgacaagagtgaaactccgtctcaaaaaataaattaaataaataaat s panTro4.chr19 58943108 171 + 63644993 gccgggcgtggtggcaggcacctgtaatccc----agctactcaggaggctaaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagccaagattgtgccactgcactccagcctggatgctaagagtgaaatgccgtctcaaaaaataaattaaataaataaat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102574361 171 - 106955855 gctgggcgtggtggcaggcacctgtaatccc----agctactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagtcaagatcgtgccactgcactccagcctgggtgacaagagtgaaactccgtctcaaaaaataaattaaatagataaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59864625 175 + 64156825 gtcgggcgtggtggtgggcacctgaaatcccagccagctactcaggagactgaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagacgagattgtgccactgcactctggcatggatgacaagagtgaaactccgtctcaaaaaataaattaaataaataaaG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54881361 175 + 59248254 gtcgggcgtggtggcgggcacctgaaatcccagctagctactcaggagactgaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagccgagatcgtgccactgcactctggcatggatgacaagagtgaaactccatctcaaaaaataaattaaataaataaag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47004879 175 + 51301725 gtcgggcgtggtggcgggcacctgaaatcccagctagctactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagccgagatcgtgccactgcactccggcatggatgacaagagtgaaactccatctcaaaaaataaattaaataaataaag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46717216 171 + 50890351 gtcgggcgtggtggcgggcacctgaaatcccagctagctactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagccgagatcgtgccactgcactccagcatggatgacaagagtgaaactccatctcaaaaaataaattaaataaaT---- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e ponAbe2.chr19 55804771 132 + 60714840 I e calJac3.chr22 45291066 1315 + 49145316 I a score=731941.000000 s hg38.chr19_GL949747v2_alt 6456 356 + 729520 aattagctggacgtggtggcaggcacctgtaatcccagc-tacttgggaggctgaggcaggagaatcacttgagcctgggaggtggaggtt----------------------------------------------gcagtgaccagagatcgtgccactgaacgccagcctgggcaacagagcaagattctgtctca--aaaacaaaaacaaaaacaaaaaaaGGCTCAAGTTTATGAATGAACTGTTCATATCAGGTGATGGTCTTTCAAAATAATGACTG---TTTTGTACCAACTATTGTGCTCATGTGATTGATTGAACAATGCTTCCAAAGAATTTGAAACAATAAGGCAAAGAAACCTAATGTTCATAACAGAAAAAAAAATTAAATGTATAGCACTAGA s panTro4.chr19 58943279 353 + 63644993 aattagctggacgtggtggcaggcacctgtaatcccagc-tacttgggaggctgaggcaggagaatcacttgagcctgggaggtggaggtt----------------------------------------------gcagtgaccagagatcgtgccactgaacgccagcctgggcaacagagcaagattctgtctca-------aaaaacaaaaacaaaaaaaGGCTCAAGTTTATGAATGAACTGTTCATATCAGGTGATGGTCTTTCAAAATAATGACTG-TTTTTTGTACCAACTATTGTGCTCATGTGATTGATTGAACGATGCTTCCAAAGAATTTGAAACAATAAGGCAAAGAAACCTAATGTTCATAACAGAAAAAAAAATTAAATGTATAGCACTAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55804903 353 + 60714840 aattagtcaggcctggtggcgggcacctgtaatcccagc-tactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggtt----------------------------------------------tcggtgagccgagatcatgccactgaactccagcctgggcaac--agcaagactctgtctcaaaaaaacaaaaacaaaagc-aaaaaaGGCTTAAGTTTATGAATGAACTGTTCATATTAGGTAATGGTCTTTCAAAATAATGACTG-TTTTTTGTACCAACTATTGTACTCATG----TGATTGAACAATGCTTCCAAAGAATTTGAAACAATAAGGCAAAGAAACCTAATGTCCATAACAGCAAAAAAAATTAAATATATAGCACTAGA i ponAbe2.chr19 I 132 C 0 s nomLeu3.chr10 102574532 346 - 106955855 aattagctggacgtggtggcaggcacctgtagtcccagc-tactcaggaggctgaggcaggagaatcacttgagcctgggaggcggaggtt----------------------------------------------gcagtgacctgagatcgtgccaccgaacaccagcctgggcaacagagcaagattctgtctca-------aaaaaaaaaaac--aaaaaGGCTCAAGTTTATGAATGAACTGTTCATATCAGGTGATGGTCTTTGAAAATAATGACTG-TTTTTTGTATCAACTATTGTGCTCATGTGATTGATTGAACAATGCTTCCAAAGAATTTGAAACAATAAGGCAAAGAAACCTAATGTCCATAACAGAAAAAG-----AAATGTATAGCACTAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59864800 358 + 64156825 ATttagccggccatggtggcaggcacctgtaatcccagc-tacccgggaagctgaagcaggagaatcacttgagc----------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------cagcctgggcaacagagcaagactctgtctcaaaaaaacaaaaacaaaagcaaaaaaCGGCTCAAGTTTATGAATGAACTGTTCATATCAGGTAC---TCTTTCAAAATAATGACCGTTTTTTTGTACCAACTATTGTGCTCACGTGATTGGTTGAACGGTGCTTCCAAAGAATTTGAAACAATAAGTCAAAGAAACCTAATGTCCATAACAGAAAAAAACAATAGATGTATAGCACTAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54881536 358 + 59248254 aTttagccggccatggtggcaggcacctgtaatcccagc-tacccgggaagctgaagcaggagaatcacttgagcccaggaggcggaggtt----------------------------------------------gaagtgacctgagatcgtgccactgaactccagcctgggcaacagagcaagactctgtctcaaaaaaacaaaaacaaaagcaaaaaaCGGCTCAAGTTTATGAATGAACTGTTCATATCAGGTAC---TCTTTCAAAATAATGACCGTTTTTTTGTACCAACTATTGTGCTCACGTGATTGGTTGAACGGTGCTTCCAAAGAATTTGAAACAATAAGTCAAAGAAACCTAATGTCCATAACAGAAAAAAACAATAGATGTATAGCACTAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47005054 358 + 51301725 atttagccggccgtggtggcaggcacctgtaatcccagcttacttgggaagctgaagcaggagaatcacttgagcccaggaggtggaggtt----------------------------------------------gcagtgacctgagatcgtgccactgaactccagcctgggcaacagagcaagactctgtctcaaaaaaacaaaaacaaaagcaaaaaaaggctCAAGTTTATGAATGAACTGTTCATATCAGGTAC---TCTTTCAAAATAATGACCG-TTTTTTGTACCAACTATTGTGCTCACGTGATTGGATGAACGGTGCTTCCAAAGAATTTGAAACAGTAAGTCAAAGAAACCTAATGTccataacagaaaaaaacaatagatgtatagcactaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46717387 357 + 50890351 ATttagccaggcgtggtggcaggcacctgtaatcccagc-tacttgggaagctgaagcaggagaatcacttgagcccaggaggcggaggtt----------------------------------------------gcagtgacctgagatcgtgccactgaactccagcctgggcaacagagcaagactctgtctcaaaaaaacaaaaacaaaagcaaaaaaaGGCTCAAGTTTATGAATGAACTGTTCATATCAGGTAC---TCTTTCAAAATAATGACTG-TTTTTTGTACCAACTATTGTGCTCACGTGATTGGATGAACAATGCTTCGAAAGAATTTGAAACAATAAGGCAAAGAAACCTAATGTCCATAACAGAAGAAAACAATAGATGTATAGCATTAGA i chlSab2.chr6 C 0 I 27 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I a score=-7609.000000 s hg38.chr19_GL949747v2_alt 6812 9 + 729520 AAAATTGA--------t-- s panTro4.chr19 58943632 10 + 63644993 AAAATTGA-------tt-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55805256 17 + 60714840 AAAATTGAttttttttt-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102574878 12 - 106955855 AAAATTCA-----tttt-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59865158 8 + 64156825 --AA---------tttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54881894 17 + 59248254 --AAttttttttttttttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47005412 7 + 51301725 --a----------tttttt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e chlSab2.chr6 46717744 27 + 50890351 I a score=730544.000000 s hg38.chr19_GL949747v2_alt 6821 308 + 729520 ttttttttttttgagacagggtctcactctgtcacccaggctggagtgc----agtggtgcaatgatggctcactgcagcctccacctcctgggctccagcgatcctcctgcctcagcctctagagtagcccggactacaagcatgcaccaccatgctcagctaatttttgtatttttagtatagacagggttttaccattttccccaggctggtctcgaactcctatgctcaagcaatcaacttgcctcagcctcccaaagtgctgggattacaggcatgaacc----acagagcctggcATGATACTAGAAAAA s panTro4.chr19 58943642 308 + 63644993 ttttttttttttgagacagggtctcgctctgtcacccaggctggagtgc----agtggtgcaatgatggctcactgcagcctccacctcctgggctccagcgatcctcctgcctcagcctctagagtagcccggactacaagcatgcaccaccatgctcagctaatttttgtatttttagtatagacagggttttaccattttccccaggctggtctcgaactcctatgctcaagcaatcaacctgtctcagcctcccaaagtgctgggtttacaggcatgaacc----acagagcctggcATGATACTAGAAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55805273 306 + 60714840 ttttttttttttgagacagggtctca--ctgtcacccaggctggagtgc----agtggtgcaatgctggctgactgcagcctccacctcctgggctccagcgatcctcctgcctcagcctctagagtagcccggactacaagcatgcaccaccacacccagctaatttttgtatttttagtagaaacagggttttgccattttccccaggctggtctcaaactcctatgctcaagcaatccacctgcctcagcctcccaaagtgctgggattacaggcatgaacc----actgagcctggcATGGTACTAGaaaaa i ponAbe2.chr19 C 0 I 304 s nomLeu3.chr10 102574890 312 - 106955855 ttttttttttttgagacagggtctcactctgtcacccaggctggagtgc----agtggtgcaatgatgactcactgcagcctccacctcctgggctccagcgatcttcctgcctcagcctctagagtagcctggactacaagcatgcaccaccatatccagctaatttttgtattttcagtagagacagggttttgccattttccccaggctgttctcgaactcctatgctcaagcaatccacctgcctcagcctcccaaagtgctggggttacaggcatgaaccaGTGAGTGAGCCTGGCATGGTACTAGAAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59865166 310 + 64156825 tttttttttttggagacagggtcttactctgtcacccaggctggagtgcagtgagtggtgcaatgatggctcactgcagcctccaccccctgggctccagcgatcctcctgcctcagcctctagagtagcacagactacaagcgtgcaccaccacgcccagctaatttttgtatttttagtagagacagggttttgccattttccccaggctggtctcgaactcctaggctcaagcactctacctgcctcagtcccccaaagtgctgggattacaggcatgaacc----actgcgcctggTGTGGTACTAGAAA-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54881911 310 + 59248254 tttttttttttggagacagggtcttactctgtcacccaggctggagtgcagtgagtggtgcaatgatggctcactgcagcctccacctcctgggctccagcgatcctcctgcctcagcctctagagtagcccagactacaagcgtgcaccaccacgcccagctaatttttgtatttttagtagagacagggttttgccattttccccaggctggtctcgaactcctaggctcaagcaatctacctgcctcagtctcccaaagtgctgggattacaggcatgaacc----actgcgcctggTGTGGTACTAGAAA-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47005419 312 + 51301725 ttttttttttttgagacagggtcttactctatcacccaggctggagtgcagtgagtggtgcaatgatggctcactgcagcctccacctcctgggctccagcgatcctcctgcctcagcctctagagtagcccagactacaagcgtgcaccaccacgcccagctaatttttgtatttttagtagagacaaggttttgccattttccccaggctggtctcgaactcctaggctcaagcaatctacctgcctcagtctcccaaagtgctgggattacaggcgtgaacc----actgcgcctggtgtGGTACtagaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46717771 312 + 50890351 ttgttgttgttggagacagggtcttactctgtcacccaggctggagtgcagcaagtggtgcaatgatggctcactgcagcctccacctcctgggctccagcgatcctcctgcctcagcctctagagtagcccagactacaagcgtgcaccaccacgcccagctaatttttgtatttttagtagagacagggttttgccatttcccccacgctggtctcgaactcctaggctcaagcaatctacctgcctcagtctctcaaagtgctgggattacaggcgtgaacc----actgcgcctggTATGGTACTAGAAAAA i chlSab2.chr6 I 27 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I a score=388837.000000 s hg38.chr19_GL949747v2_alt 7129 192 + 729520 T------TCtttttttttttttgacatttaagttcaggggtacatgggcaggatgtgcaggtttgttacacgggtaaacgtgtgtcatgggggtttgttgtacagatta---------ttttttttctagtgtatttactacttcctgattatcagattattttatcacccagttattaagcctagtacccactagttatttttcct s panTro4.chr19 58943950 191 + 63644993 T------TC-ttttttttttttgacatttaagttcaggggtacatgggcaggatgtgcaggtttgttacacaggtaaacgtgtgtcatgggggtttgttgtacagatta---------ttttttttctagtgtatttactacttcctgattatcagattattttatcacccagttattaagcctagtacccactagttatttttcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55805883 198 + 60714840 t------tttttttttttttttaacttttaagttcaggggtacatggtcaggacgtgcaggtctgttacatgggtaaacgtgtgtcatgggggtttgttgtacAGATTATTTC---CTTTTTTTTTCTAGTGTAGTTACTACTTCCtgatatacagattattttatcacccaggtattaagcctagtacccactagttattttttgt i ponAbe2.chr19 I 304 C 0 s nomLeu3.chr10 102575202 151 - 106955855 ----------------TTCTTT--------------------------------------gtttgttacacaggtaaacgtgtgtcatgggggtttgttgtacagattatttc-ttcTTTTTGTTTCTAGTGTATTTACTACTTCCtgatatacagatt-ttttatcacccaggtattaagcccagtacccactagttatttttcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59865476 196 + 64156825 --------Ttttttttttttttaacttttaagttcaggggtacatgtgcaggatgtgcaggtttgttacacaggtaaacgtgtgtcatgggggtttgttgtacagattatttc---ttttttttttctagtgtagttactacttcctgttgtacagattattttatcgcccaggtattaagcctagtacccactagttatttttcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54882221 197 + 59248254 -------Tttttttttttttttaacttttaagttcaggggtacatgtgcaggatgtgcaggtttgttacacaggtaaatgtgtgtcatgggggtttgttgtacagattatttc---TTTTTTTTTTCTAGTGTAGTTACTACTTCCtgatatacagattattttatcgcccaggtattaagcctagtacccactagttatttttcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47005731 207 + 51301725 tcctttttttttttttttttttaacttttaagttcaggggtacatgtgcaggatgtgcagatttgttacacaggtaaacgtgtgtcatgggggtttgttgtatagattatttctttttttttttttctagtgtagTTACTACTTCCtgatatacagattattttatcacccaggtattaagcctagtacccactagttatttttttt i papAnu2.chr19 C 0 I 683 s chlSab2.chr6 46718083 200 + 50890351 TTCTT--Tttttttttttttttaacttttaagttcaggggtacatgtgcaggatgtgcaggtttgttacacaggtaaac--gtgtcatgggggtttgttgtacagattatttc---ttttttttttctagtgtagttactacttcctgatacacagattattttatcgcccaggtattaagcctagtactcactggttatttttcct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I a score=4011.000000 s hg38.chr19_GL949747v2_alt 7321 2 + 729520 ga s panTro4.chr19 58944141 2 + 63644993 ga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55806081 2 + 60714840 ga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102575353 2 - 106955855 ga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59865672 2 + 64156825 ga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54882418 2 + 59248254 ga i macFas5.chr19 C 0 M 20327 s chlSab2.chr6 46718283 2 + 50890351 ga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e papAnu2.chr19 47005938 683 + 51301725 I a score=176162.000000 s hg38.chr19_GL949747v2_alt 7323 154 + 729520 tcctctctctgctaccaccctccaccctctgacaggccccagcatgtgtGAAAAATTCTTATAGTCTTCTAGAAAATACAATAGGTAGCCTTTGGAACATAGGGTATCATAAAGAGAAGCTGTAGAAAATATATTTCTTTGAA----ttttttttttt s panTro4.chr19 58944143 158 + 63644993 tcctctctctcctaccaccctccaccctctgacaggccccagcgtgtgtGAAAAACTCTTATAGTCTTCTAGAAAATACAATAGGTAGCCTTTGGAACATAGGGTATCATAAAGAGAAGCTGTAGAAAATATATTTCTTTGAAttttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55806083 141 + 60714840 tcctgtctctccta-------ccaccctctgacaggccccagtgtgtgtGAAAAATTCTTGTAGTCTTCTAGAAAATACCATAGGCAGCCTTTGGAACACAGGGTATTATAAAGAGAAGCTGTAGAAAATATATTTCTTTGAA----------TTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102575355 144 - 106955855 tcctgtctctcctactaccctccaccctctgacgggccccagtgtgtgtGAAAAATTCTTACAGTCTTCTAGAAAATACAATAGTTAGCCTTTGGAACGTAGGGTATTATATAGAGAAGCTGTAGAAAATATATTTCTTTGAA--------------T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59865674 154 + 64156825 ccctctctctcctaccaccctccaccctctgacaggccccagtgtgtgtGAAAAATTTTTACAGTCTTCTAGAAAGTAAAATAGGTAGCCTTTGGAACATAGGGTATTATATAGAGAAGCTGTAGAAAATATATTTCTTTGAA----TTTTTTTTTTT i rheMac3.chr19 C 0 I 333 s chlSab2.chr6 46718285 154 + 50890351 tcctctctctcctaccaccctccaccctctgacaggccccagtgtgtgtGAAAAATTCTTATAGTCTTCTAGAAAGTAAACTAGGTAACTTTTGGAACATAGGGTATTATATAGAGAAGCTGTAGAAAATATATTTCTTTGAA----ttttttttttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e papAnu2.chr19 47005938 683 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=2730.000000 s hg38.chr19_GL949747v2_alt 7477 3 + 729520 ttt s panTro4.chr19 58944301 3 + 63644993 ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55806224 3 + 60714840 TTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102575499 3 - 106955855 TTT i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 46718439 3 + 50890351 ttt i chlSab2.chr6 C 0 I 443 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e papAnu2.chr19 47005938 683 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59865828 333 + 64156825 I a score=7656.000000 s hg38.chr19_GL949747v2_alt 7480 15 + 729520 tttttttACAAATGA s panTro4.chr19 58944304 15 + 63644993 tttttttACAAATGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55806227 15 + 60714840 TTTTTTTACAAATGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102575502 15 - 106955855 TTTTATTACAAATGA i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e chlSab2.chr6 46718442 443 + 50890351 I e papAnu2.chr19 47005938 683 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59865828 333 + 64156825 I a score=236370.000000 s hg38.chr19_GL949747v2_alt 7495 143 + 729520 TCACTATAATGTTTAAAATATGTTTACCACCTACAG-TTgtgtgctagggaagccataacaaaatgccccccactggggggcttatgggacagaaatggattttct-caccgttctgcaggctggaaatccaagatggaggtgcc s panTro4.chr19 58944319 143 + 63644993 TCACTATAATGTTTAAAATATGTTTACCACCTACAG-TTgtgtgctagggaagccataacaaaatgccccccactggggggcttataggacagaaatggattttct-caccgttctgcaggctggaaatccaagatggaggtgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55806242 143 + 60714840 TCACTATAATGTTTAAAATATGTTTACCACCTACAG-TTgtgtgctagggaagccataacaaaataccccccactgggggacttatgatatagaaatggattttct-caccgttctgcaggctggaaatccaagacggaggtgcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102575517 145 - 106955855 TCACTATAATGTTTTAAATATGTTTACCACCTACAGtttgtgtgctagggaagccataacaaattaccccccactggggtgcttatggtaccgaaatggattttctccatagttctgcaggctggaaattcaagatggaagtgcc i nomLeu3.chr10 C 0 I 2352 s rheMac3.chr19 59866161 143 + 64156825 TCACTATTACGTTTAAAATATGTTTACCACCtgcag-tagtgtgctagggaagccataacaaaataccccccacggggaggcttatggtacaaaaatggattttct-cacagttctgcaggctggaaatccaagatggaggtgcc i rheMac3.chr19 I 333 C 0 s papAnu2.chr19 47006621 143 + 51301725 tcactattatgtttaaaatatgtttaccaCCTGCAG-TAGTGTGCTAGGgaagccataacaaaataccccCCACgggggggCTTATGGTACAAAAAtggattttct-cacagttctgcaggctggaaatccaagatgGAGGTGCC i papAnu2.chr19 I 683 C 0 s chlSab2.chr6 46718885 134 + 50890351 TCACTATTGTGTTTAAAATATGTTTACCATCtgcag-tagtgtgctagggaagcc--------ataccccctactggggggcttatggtacaaaaatggattttct--acagttctgcaggctggaaatccaaaatagaggtgcc i chlSab2.chr6 I 443 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=1390201.000000 s hg38.chr19_GL949747v2_alt 7638 1126 + 729520 agtagggtcagtttctcccggggtctctctgctttgtatgcagatggccgccttcttgctgtgtctccacgtggtctttcctctggatgtACATATCCTGGTGTCCt-----tttcttttttttttttttgagttggagtcttactctgttgccca-gctggagtgcaatgacacgatctcagctcactgcagcctctgcctcctggattcaagcgattcccctgcctcagcctatcgagtagctgggattacaggcgtgcaccaccgcgcccagctaatttttgtatttttagtagacatggggtttggccatgttggccaggctggtcttgaactcctgacctcaggcgatccgcccacctgggcttcccaaagtgctgaaattacaggcgtgagcca-ccacacGTAGCccctagtgtcttttttatgtccaaatttccttttttcacaacggcctcttgtctctaaatacagtcacattctgagttactgggagttaggattcagcacacgaattttgaggagatgtaattcagcccataaTTAAGCCCTATCCTCATCAGACTGATGATCTGTGCTTTCTCTGAACTAAC-AGGATTTATATATTCCTTTTTAACAGCAAGGAACTCAGGTTCTCCATGGCCCCTTTATGAAGTTGCTCCTGCTGGTACATGACCCTCAGTTAGTTTCCTGAAGTTATTTACAAAGCCACCTCCACATGTGTTGAGCCTCTTCAGTTTAC-TTCAAATCCTGGGCCTGTGCTGCATGGCGGTGCTTTCCACAGATTCATATGTTAGATCttttcta-------------tttttttttctgagacagagtttccctctgtcgcccaggctggagtgcaatggtgtgatctcggctcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcctgagtagcagggactacaggcgtgtgccactattcccagctaatttttgtatttttagtagaggcagggtttcaccatattggccaggatggtctcgatctcttgaccccatgatcctcccactttgacctcccaaagtgttgggattacaggtgtgagctaccgcgcctggccACATATTAAATCttttttttttttttttttttt s panTro4.chr19 58944462 1138 + 63644993 agtagggtcagtttctcctggggtctctgtgctttgtatgcagatggccgccttcttgctgtgtctccatgtggtctttcctctggatgtACATATCCTGGTGTCCt-----tttc-tttttttttttctgagttggagtcttactctgttgccca-gctggagtgcaatgacacgatctcagctcactgcagcctctgcctcctggattcaagcgattcccctgcctcagcctatcgagtagctgggattacaggcgtgcaccaccgcgcccagctaatttttgtatttttagtagacatggggtttggccatgttggccaggctggtcttgaactcctgacctcaggcgatccgcccacctgggcttcccaaagtgctgaaattacaggcgtgagcca-ccgcacGTAGCccctagtgtcttttttatgtccaaatttccttttttcacaagggcctcttgtctccaaatacggtcacattctgagttactgggagttaggattcagcacacgaattttgaggagatgtaattcagcccataaTTAAGCCCTATCCTCGTCAGACTGATGATCTGTGCTTTTTCTGAACTAAC-AGGATTTATATATTCCTTTTTAACAGCAAGGAACTCAGGTTCTCCATGGCCCCTTTATGAAGTTGCTCCTGCTGGTACATGACCCTCAGTTAGTTTCCTGAAGTTATTTACAAAGCCACCTCCACATGTGTTGAGCCTTTTCAGTTTAC-TTCAAATCCTGGGCCTGTGCTGCATGGCGGTGCTTTCCACAGATTCATATGTTAGATCTtttctattttttttttttttttttttttttgagacagagtttccctctgtcgcccaggctggagtgcaatggtgtgatctcggctcactgcaacctctgcctcctgggttcaaacaattctcctgcctcagcctcctgagtagcagggactacaggcgtgtgccactattcccagctaatttttgtatttttggtagaggcagggtttcaccatattggccaggatggtctcgatctcctgaccccatgatcctcccactttgacctctcaaagtgttgggattacaggtgtgagctactgcgcccggccACATATTAAATCttttttttttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55806385 1124 + 60714840 agtagggtcagtttctcctggggtctctctgctttgtatgcagatgggcgccttcttgctgtgtctccacatggtctttcctctggatgtacatatcctagtgtctt-----tttt-tttttttttttttgatatggagtcttactctgttaccca-gctggagtgcaatggcacgatctcagctcactgcagcctctgcctcctggattcaagcgattctcctgcctcagcctatcgagtagctgggattacaggcatgcaccactgcgcccggctaa-ttttgtatttttagtagagatggagtttgtccatgttggccaggctggtcttgaactcctgacctcaggcgatccgcccacctgagcttcccaaagtgctgagattataggtgtaagcca-ctgcacGTAGCccctagtgtcttttttatgtccaaatttccttttctcataagggcctcttgtctccaaatacagtcatactctgagttactgagagttaggattcagcacacaaattttgaggagatgtaattcagcccataaTTAAGCCCTATCCTCGTCAGACTCATGATCTGTGCTTTCTCTGAACTAAC-AGGATTTATATATTCCTTTTTAACAGCAAGGAACTCAGGTTCTCCATGGCCCCTTTATGAAGT------TGCTGGTACATGACCCTCAGTTAGTTTCCTGAAGTCATTTACAAAGCCACCTCCACATGTGTTGAGCTTCTTCAGTTTAC-TTCAAATCCTGGGCCTGTGCTGCATGGCTGTGCTTTCCACAGATTCACATGTTAGGTCttttctt-----tctttttttttttttttttgagacagagtttccctctgtcgcccaggctggagtgcaatggtgtgatctcggctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagcagggactacaggtgtgtgccaccatgcccggctaatttttgtatttttagtagaggcagggtttcaccatattggccaggatggtcttgatctcttgacctcatgatcctcccacttcgacctcccaaagtgttgggattacaggtgtgagctactgcgcctggccACATATTAAATC--ttttttttttttttttttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59866304 1124 + 64156825 agtagggtcagtttctcctgaggcctctctgctttgtatgcagatggccgccttcttgctgtgtctccacatggtctttcctctggatgtacacaacctagtgtgtc--ttttttt-tttttttttttttgagatggaatcttgctctgttgcccaggctagagtacaatggcatgatctcacctcactgcagcctccgcctcctgagttcaagcgattctcctgcctcagcctctcgagtagccaggattacaggctcaccccagcacgccctgttcatttttgtatttttagtagagatggggcttgggcatgttggccaggctggtctcgaattcctgacctcaggagatccgcccacctgggcttctcaaagtgctgagatcacaggcgtgagcca-ccgcacgtagcccctagtgtcttttttatgtccaaatttccttttttcacaagggcctcttgtctccaaatacagtcacattctgagttactgggtgttaggattcagcacacgaatttt---gagatgtaattcagcccataaTTAAGCTCTATCCTCGTCAGACTGATGATCTGTACTTTCTCTGAACTAACGGGGATTTATATATTCCTTTTCGATAGCAAAGAACTCAGGTTCTCCATGG-CCCTTTATGAAGTTGCTCCTGCTGGTACATGACCCTCAGTTAGTTTCCTGAAGTCACTTACAAAGCCACCTCCACATGTGTTGAGCCTCTTGAGTTTACTTTCAAATCCTGGGCCTGTGCTGCATGGCTGTGCTTCCCACAGATTCACATGTTAGATCttttcta----------------ttttttttgagatggagttttgctctgtcgcccaggctggagtgcaatggcatgatcttggctggctgcaacctccgcctcctgggttcaagcgattctcctacctcagtctcctgagtagctggaattacagatgagcgctaccacgcccagctaatttttgtatatttagtagagacagcttttcaccatattggccaggatggtctcgatctcttgacctcatgatcctcccgcttcaacctcccgaagtgttgggattacaggtgtgagccaccgcgcccggccACATGTTAAATCtttttcttttttctttttttt i rheMac3.chr19 C 0 I 2658 s papAnu2.chr19 47006764 1127 + 51301725 AGTAGGGTCAGTTTCTCCTGAGCCCTCTCTGCTTTGTATGCAgctggccaccttcttgctgtgtctccacGTGGTCTTTCCTCTGGATGTACACATCctagtgtctcttttttttt-tttttttttttttgagatggaatcttgctccgttgcccaggctggagtgcaatggcatgatctcagctcactgcagcctctgcctcctgagttcaagcgattctcctgcctcagcctcttaagtagccaggattacaggtgcacaccaccacgcccagttaatttttgtatttttagtagagatggggcttggccatgttggccaggctggtctcgaattcctgaccttaggagatccgcccacctgggcttctcaaagtgctgagatcacaggcgtgagcca-ccgcacgtagCCCCTAGTGTCTTTTTtatgtccaaatttccttttttcacaaGGGCCtcttgtctccaaatacagtcacattctgagttaCTGGGCGTTAGGATTTAGCACACGAATTTT---GAGATGTAATTCAGCCCATAATTAAGCTCTATCCTCGTCAGACTGATGATCTGTACTTTCTCTGAACTAACGGGGatttatatattcctttttgATGGCAAAGAACTCAGGTTCTCCATGGCCCCTTTATGAAGTTGCTCCTGCTGGTACATGACCCTCAGTTAGTTTCCTGAAGTCACTTACAAAGCCACCTCCACATGTGTTGAGCCTCTTCAGTTTACTTTCAAATCCTGGGCCTGTGCTGCATGGCTGTGCTTCCCACAGATTCACATGTtagatcttttcta----------------ttttttttgagatggagttttgctctgtcgctcaggctggagtgcaatggcatgatcttggctcgctgcaacctccgcctcctgggttcaagcgattctcctgcctcagtctcctgagtagctggaattacagatgagcgctaccacgcccagctaatttttgtatatttagtagagacagcttttcaccatattggccaggatggtctcgatctcttgacctcatgatcctcctgcttcaacctcccaaagtgttgggattacaggtgtgagccaccgcacgcagccacatgttaaatctttttttttttttttttcttt i papAnu2.chr19 C 0 I 6 s chlSab2.chr6 46719019 1122 + 50890351 agtagggtcagtttctcctgagccctctctgctttgtatgcagatggccgccttcttgctgtgtctccacgtggtctttcctctggatgtacacatcctagtgtctc------tct-cttttttttttttgagatggaatcttgctccgttgcccaggctggagtgcaatggcatgatctcagctcactgcagcctccgcctcctgagttcaagcgattctcctgcctcagcctctcgagtagccaggattacaggcgcacaccaccacgcccggttgatttttgtatttttagtagagatggggcttggccatgttggccaggctggtctcgaattcctgacctcaggtgatccgcccacctgggcttctcaaagtgctgagattacaggcgtgagccacccgcacatagcccctagtgtcttttttatgtccaaatttccttttttcacaagggcctcttgtctccaaatacagtcacattctgagttactgggcgttaggattcagcacatgaatttt---gagatgtaattcagcccataaTTAAGCTCTGTCCTCGTCAGACTGATGATCTGTACTTTCTCTGAACTAACGGGGATTTATATATTCCTTTTTGATAGCAAGGAACTCAGGTTCTCCATGGCCCCTTTATGAAGTTGCTCCTGCTGGTACATGACCCTCAGTTAGTTTCCTGAAGTCACTTACAAAGCCACCTCCACATGTGTTGAGCCTCTTCAGTTTACTTTCAAATCCTGGGCCTGTGCTGCATGGCTCTGCTTCCCACAGATTCACATGTTAGAtcttttcta----------------ttttttctgagatggagttttgctctgtcgcccaggctggagtgcaatggcatgatcttggctcgctgcaacctccgcctcctgggttcaagcgattctcctacctcagtctcctgagtagctggaattacagatgagcgctaccacgcccagctaatttttgtatatttagtagagacagcttttcaccatattggccaggatggtctcgatctcttgacctcatgatcctcccgcttcaacctcctgaagtgttgggattacaggtgtgagccaccgcacccggccACATGTTAAATCttttttttttttttttttttt i chlSab2.chr6 C 0 I 4 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e nomLeu3.chr10 102575662 2352 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M a score=177693.000000 s hg38.chr19_GL949747v2_alt 8764 219 + 729520 gagacagagtcttgctctgtcacccaggctggagtgcaatgatggatctcggctcactgcaagctccgcctcccaggttcatgccattttcctgcctcagcctcccgagtagctgagactacaggcacccgccaccacacctggctaattttttgtatttatagtagagata-----------tgttagcca-ggatggtctcgatctcctgacctcatgatccacccacc s panTro4.chr19 58945600 219 + 63644993 gagacagagtcttgctctgtcacccaggctggggtgcaatgagggatcttggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgagactacaggcacccgccatcacgcctggctaattttttgtatttatagtagagata-----------tgttagcca-ggatggtctcaatctcctgacctcatgatccacccacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55807509 220 + 60714840 gagacggagtcttgctgtgtcacccgggctagagtgcaatgagggatctcggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgagactacaggcacccgccaccacacccggctaattttttgtatttgtagtagagaca-----------tgttagccagggatggtgtcaatctcctgacctcgtgatccacccgcc i ponAbe2.chr19 C 0 I 5201 s papAnu2.chr19 47007897 230 + 51301725 gagacagagtctccctctgtcaccctaactggagtgcaatgagggatctgggctcactgcaagctccgcctcccaggttcacgccattctcctggctcagcctcctgagtagctgggactacaggcgcccgccaccacgtccggctaattttttgtatttgtagtagagacagggtttcaccgtgttagcca-ggatggtctcgatcccttgacctcatgatccacctgcc i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 46720145 230 + 50890351 gagacggagtctcgctctgtcaccctaactggagtgcaatgaggaatctgggctcactgcaagctccacctcccaggttcacgccattctcccggctcagcctcctaagtagctgggactacaggcgcctgccaccacgtctggctaattttttgtatttgtagtagagacagggtttcaccgtgttagcca-ggacggtcttgatcccctgacctcgtgatccacctgcc i chlSab2.chr6 I 4 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e nomLeu3.chr10 102575662 2352 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59867428 2658 + 64156825 I a score=12021.000000 s hg38.chr19_GL949747v2_alt 8983 16 + 729520 tcggcctcccaaagtg s panTro4.chr19 58945819 16 + 63644993 tcggcctcccaaagtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55812930 16 + 60714840 tcggcctcccaaagtg i ponAbe2.chr19 I 5201 C 0 s papAnu2.chr19 47008127 15 + 51301725 ttggtct-ccaaagTG i papAnu2.chr19 C 0 I 1767 s chlSab2.chr6 46720375 16 + 50890351 ttggcctcccaaagtg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e nomLeu3.chr10 102575662 2352 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59867428 2658 + 64156825 I a score=135279.000000 s hg38.chr19_GL949747v2_alt 8999 265 + 729520 ctgggattacaggcgtgagccaccgcgcccggccTCATGTTAAATCTTGACACCCAATGTGATCTGAGAGGTTGGGCCTTTGGtgatggcagcagccactccagacggcttgctgctgccatgacgccacctgccccagggaggcccagcccgggctatacacgctatggagccgcagggagccctgccccttccgagttggggcgggagctcccagggtgatgctacagctgtccaaaccccagctgtggatccgagcctccct s panTro4.chr19 58945835 265 + 63644993 ctgggattacaggcatgagccaccatgcccggccACATGTTAAATCTTGACACCCAATATGATCATAGAGGTTGGGCCTTTGGtgatggcagcagccactccagacggcttgctgctgccgtgacgccacctgccccagggagtcccagcccgggctatacacgctatggagccgcagggagtcctgccccttccgagttggggtgggagctcccagggtgatgctacagctgtccaaaccccagctgtggatctgagcctccct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55812946 265 + 60714840 ctgggattacaggcatgagccaccacgcctggccACATGTTAAATCTTGACACCCAATGTGATCGTAGAGGTTGGGCCTTTGGtgatggcagcagccactccagacggcttgctgctgccatgatgccacctgccacacggaggcccagcccgggctatacacgctatggagccgcagggagccctgccccttccgagttggggcgggagctcctagggtgatgctacagttgtccaaaccccagctgtggatccgagcctccct i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 46720391 265 + 50890351 ctgggatgacaggaatgagccaccgcgcccggccacatgttaaatcttaacatccaatgtgatcgtagaggttgggcctttggtgatggcagcagccactccagatggcttgccgctgccatgacgccaactgccacagggaggcccagctgggactatacactcaatggagccgcagggagtcctgccccttctgagttggggcgggaggtcccagggtgctgcttcagctgtgcaaaccccagctgtggatccgagcctccct i chlSab2.chr6 C 0 I 1632 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e nomLeu3.chr10 102575662 2352 - 106955855 I e papAnu2.chr19 47008142 1767 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59867428 2658 + 64156825 I a score=1515.000000 s hg38.chr19_GL949747v2_alt 9264 8 + 729520 CAGATCGT s panTro4.chr19 58946100 8 + 63644993 CAAATCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55813211 8 + 60714840 CGGATCAT i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e nomLeu3.chr10 102575662 2352 - 106955855 I e chlSab2.chr6 46720656 1632 + 50890351 I e papAnu2.chr19 47008142 1767 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59867428 2658 + 64156825 I a score=456334.000000 s hg38.chr19_GL949747v2_alt 9272 355 + 729520 ATCACATATCAAGACTTACTCTtgttgacaaaaagagtcaaactctataaaatatttgaagagatttattctgagccaaatatgataa---------------tgaccatggcccctgacacagccctaaggaggtcctgagaccatgtacccaaggtggtcggggggcagcttggttttatacattttagggaggcgtgaggcatcaatcaaacacatttgagaaatacattggtttggtccagaaaggctggacaatttgaaggaggcagggccttccaggctttaggtaaattaaaacattttctggttgacaattggttgagtttgtctaaagacctgggattaatagagaggaaatattcaggtt s panTro4.chr19 58946108 355 + 63644993 ATCACATATCAAGACTTACTCTtgttgacaaaaagagtcaaactctataaaatatttgaagagatttattttgagccaaatatgataa---------------tgaccatggcccctgacacagccctaaggaggtcctgagaccatgtacccaaggtggtcggggggcagcttggttttatacattttagggaggtgtgagacatcaatcaaacacatttgagaaatacattggtttggtccagaaaggctggacaatttgaaggaggcagggccttccaggctttaggtaaattaaaacattttctggttgacaattgattgagtttgtctaaagacctgggattaatagagaggaaatattcaggtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55813219 355 + 60714840 ATCACATATCAAGACTTACTCTtgttgacaaaaagagtcaaactctataaaatattagaagagatttattctgagccaaatatgataa---------------tgaccatggcccctgacacagccctaaggaggtcctgagaccatgtacccgaggtggtcggggggcagcttggttttatacattttagggaggcatgagacatcaatcaaacacatttgagaaatacattggtttggtccagaaaggctggacaatttgaaggaggcagggccttccaggctttaggtaaattaaaacattttctggttgacaattggttgagtttgtctaaagacctgggattaacagagagggaatattcaggtt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59870086 370 + 64156825 ATCACATATCAAGACTTACTCTtgtcgacaagaagaatcaaactctataaaatatttgaagagatttattctgagccaaatatgataatgaaccaaatatgagtgaccatgggccatgacacagccctcaggaggtcctgagaacatgtacccaaggtggtcggggggcatcttggttttatacattttagggaggcatgagacatcaatcaaacacatttgagaaatacattggtttggtccagaaagcctggacaatttgaaggaggcaggggcctccaggctttaggtaaattaaaacattgtctggttgacaattggttgagtttgtctaaagacctgggattaatagacaggaaatattcaaggt i rheMac3.chr19 I 2658 C 0 s papAnu2.chr19 47009909 355 + 51301725 atcacatATCAAGACTTACTCTTGTCGACAGGAAGAATCAAACTCtataaaacatttgaagagatttattctgagccaaatatgataA---------------TGACCGtggcccgtgacacagccctcaggaggtcctgagaacatgtacccaaggtggtcggggggcatcttggttttatacattttagggaggcatgagacatcaatcaaacacatttgagaaatacattggtttggtccagaaagccTGGACAATTTGAAGGAGGCAGGGGCTTCCAGGCTTTAGGTAAATTAAAACATtgtctggttgacaattggttgagtttgtctaaagacctgggattaaTAGACAGGAAATATTCAAGGT i papAnu2.chr19 I 1767 C 0 s chlSab2.chr6 46722288 351 + 50890351 ATCACATATCAAGACTTACTCTtgtcgacaagaagaatcaaattctataaaatattggaagagatttattctgagccaaatatgataa---------------tgaccgtggcccatgacacagccctcaggaggtcctgagaacatgtacccaaggtggtcggggggcatcttggttttatacattttagggaggcatgaaac----atcaaacacttttgagaaatacattggtttggtccggaaagcctggacaatttgaaggagacgggggcttccaggctttaggtaaattaaaacattgtctgattgacaattggttgagtttgtctaaagacctgggattagtagacaggaaatattcaaggt i chlSab2.chr6 I 1632 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e nomLeu3.chr10 102575662 2352 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M a score=457507.000000 s hg38.chr19_GL949747v2_alt 9627 260 + 729520 aagataaaagattgtggagaccaaggttc-ttttgaagtcttatagtggctgcccttagagacaatagatgacaaatgtttcctactcagaccttcaaaagttgctagattctcagttaacctcctcaggattgggagg--tcctggaggaaaaagatctagcaatgttaacagagatcctttacatatgcaaatattcccccccaccaaggacagctttgcagggccatttaaaaatatggcaaagaaacatgttttggggt s panTro4.chr19 58946463 261 + 63644993 aagataaaagattgtggagaccaaggttc-ttttgaagtcttatagtggctgcccttagagacaatagatgagaaatgtttcctactcagaccttcaaaagctgctagattctcagttaacctcctcaggattgggaggtttcctggaggaaaaagatctagcaatgttaacagagatcctttacatatgcaaatatt-ccccccaccaaggacagctttgcagggccatttaaaaatatggcaaagaaacatgttttggggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55813574 260 + 60714840 aagataaaagattgtggagaccaaggttc-ttttgaagtcttatagtggctgcccttagagacaatagatgacaaatgtttcctactcagaccttcaaaaggtgctagattctcagttaacctcctcaggattgggagg--tcctggaggaaaaagatctacctatgttaacagagatcctgtacatatgcaaatattcccccccaccaaggacagctttgcagggccatttaaaaatatggcaaagaaacatgttttggggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102578014 261 - 106955855 aaaaaaaaagactgtggaaaccaaggttctttttgaagtcttatagtggctgcccttagagacaatagatgacaaatgtttcctactcagaccttcaaaaggtgctagattctcggttaatctcctcaggattgggggg--tcctggaggaaaaagatctagctatgttaacagagatcttttacatatgcaaatattcccccccaccaaggacagttttgcagggccatttaaaaatatggcaaagaaacatgttttggggt i nomLeu3.chr10 I 2352 C 0 s rheMac3.chr19 59870456 260 + 64156825 aagataaaagactgtggagaccaaggttc-tgttgaagtcttgtagcggctgcccttagagacaatagatgacaaatgtttcctactcagaccttccaaaggtgctagattctcagttaatctcctcaggattgggagg--tcctggaggaaaaagatctagctaggttaacagagatcctttacatatgcaaatgttctccccaacaaaggacagctttgtagggtcatttaaaaatatggcaaagaaacatggtttggggt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47010264 260 + 51301725 AAGATAAAAGactgtggagaccaaggttc-tgtTGAAGTCTTATAgcggctgcccttagagacaatagatgacaacTGTTTCCTACTCAGACCTTCCAAAGGTGCTAGATTCTCAGTTAATCTCCTCAGGATTGGGAGG--TCCTGGAGGAAAAAGATCTAGCTAGGTTAACAGAGATCCTTTACATATGCAAATGTTCCCCCCAACAAAGGACAGCTTTGTagggtcatttaaaaatatggcaaagaaacatggtttggggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46722639 259 + 50890351 aagataaaagactgtggagaccaaggttc-tgttgaagtcttatagcggctgcccttagagataatagatggcagatgtttcctactcaggccttccaaaggtgctagattctcagttactctcctcaggattgggagg--tcctggaggaaaaagat-gagcgaggttaacagagatcctttacgtatgcaaatgttccccccaacaaaggacagctttgtagggtcatttaaaaatatggcaaagaaacatggtttggggt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=413592.000000 s hg38.chr19_GL949747v2_alt 9887 188 + 729520 aaaatatttttattttcttctttgttaggt--aatgttatgccagagtcagattggaaagtaagtcacga----tatatagggctaaataaaacccatctgatgagaatttatggtttgtagggcatgagaccccagaccccttagataagaatctgggcaagat---------aaaaaaaaaaaatcagagctgagtcctca s panTro4.chr19 58946724 194 + 63644993 aaaatatttttattttcttctttgttaggt--aacgttatgccagagtcagattggaaagtaagtcacga----tatatagggctaaataaaacccatctgatgagaatttatggtttgtagggcatgagcccccagaccccttagataagaatctgggcaagatt---aaaaaaaaaaaaaaaaatcagagctgagtcatca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55813834 190 + 60714840 aaaatatttttattttcttctttgttaggt--aatgttatgccagagtcagattggaaagtaagtcatga----tatatagggctaaataaaacccatctgatgagaatttatagtttgtagggcatgagtccccagaccccttagataagaatctgggcaagat-------aaaaaaaaaaaaaatcagagctgagtcctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102578275 195 - 106955855 aaaatatttttattttcttctttgttaggtaaaatgttatgccggagtcagactggaaagtaagtcacga----tatatagggctaaatacgacacatctgatgagaatttgtggtttgtagggcatgagtccccagaccccttagataagaatctgggcaagat----gaaacaaaaaaaaaaaatcagagatgagttctca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59870716 197 + 64156825 aaaatatttttattttcttctttgttaggt--aatgttatgccagagtcagattggaaagcacgtcgcga----tatatagggctaaataaaacccatctgatgagaatttatggtttgtagggcatgagtccccagaccccttagagaagaatctgggcgagattaaaaaaaaaaaaaaaaaaaatcagagctgagtcctca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47010524 192 + 51301725 aaaatatttttattttcttctttgttaggt--aatgttatgccagagtcagattggaaagcaCATCGCGA----TATATAGGGCTAAATAAaccccatctgatgagaatttatggtttgtagggcatgagtCCCCAGACCCCTTAGAGAAGAATCTGGgcgagatt-----aaaaaaaaaaaaaaatcagagctgagTCCTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46722898 195 + 50890351 aaaatatttttattttcttctttgttaggt--aatgttatgccagagtcagattgtaaagtacgtcacga----tatatagggctaaataaaacccatctgatgagaatttatggtttgtagggcatgagtccccagaccccttagagaagaatctgggcaagatt--taaaaaaaaaaaaaaaatacagagctgagtcctca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45292381 189 + 49145316 aaaatgtttttcttttcttctttgttatgt--cacgttatgtcagagtcaggttggaaagtaagtcacgatatttatttaggatcaaataaaacccatctgatgagaatttgtgctttgtggggcctgactccccagaccctttagatgggaatttgggcaagat------------aaaaacaaatcagagcttagttctca i calJac3.chr22 I 1315 C 0 e canFam3.chr1 19457595 38 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=1201027.000000 s hg38.chr19_GL949747v2_alt 10075 478 + 729520 CTATGGTAATTCAGTGAGTGTGACTACCAGCATAGATGTCCATAAAGGATATCCATTAGGGCCACCCATTTTAATAATGTTTGCCAGGACCCTTCAATCAAAACAAAATCCATTCTCAGAATAGCTTAGAATCAAAGGAGGACTTTTTGGG-----------TTTT----------------------------------------------------------------------------------------TTT---------GGTT--CAAGAAGGATTGGGCAAGAAAACTGCAGGGAGTGA-AGGAATGCTGAGCTTTGGAAGCAATTAGAACCAAGAAAACAAAAGCTGAAAGCACTGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAGTCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGCGAGACAGATGGCCACCAAGAACTCCCAAGCTTAAAAAAGAATGACTCTCTGTGGCAAGAAAACAAAGAGACACTCCTCCCC-ACCTTGCTACTCCCTATGTGGCCTCCACAC---TGCAACCTGGGACTGTGTA--GTGAGGGGAGGGGGAGC s panTro4.chr19 58946918 477 + 63644993 CTATGGTAATTCAGTGAGTGTGACTACCAGCATGGATGTCCATAAAGGATATCCATTAGGGCCACCCATTTTAATAATGTTTGCCAGGACCCTTCAATCAAAACAAAATCCATTCTCAGAATAGCTTAGAATCAAAGGAGGACTTTTTGGG-----------TTTT----------------------------------------------------------------------------------------TTT---------GGTT--CCAGAAGGATTGGGCAAGAAAATTGCAGGGAGTGA-AGGAATGCTGAGCTTTGGAAGCAATTAGAACCAAGAAAACAAAAGCTGAAAGCACTGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAGTCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGCGAGACAGATGGCCACCAAGAACTCCCAAGCTTAAAAAAGAATGACTCTCTGTGGCAAGAAAACAAAGAGACACTCCTCCCC-ACCTTGCTACTCCCCATGTGGCCTCCACAC---TGCAACCTGGGACTGTGTA--GTGAGGGGA-GGGGAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814024 478 + 60714840 CTATGGTAATTCAGTGAGTGTGACTACCAGCATAGATGTCCATAAAGGCTATCCATTAGGGTCACCCATTTTAATAATGTTTGCCAGGACTCTTCAATCAAACCAAAATCCATTCTCAGAATAGCTTAGAATCAAAGGAGGACTTTTTGGG-----------TTTT----------------------------------------------------------------------------------------TTT---------GGTT--CCAGAAGGATTGGGCAAGAAAACTGCATGGAGTGA-AGGAATGCTGAGCTTTGGAAGCAATTAGAACCAAGAAAACAAAAGCTGAAAGCACTGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAGTCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGCGAGACAGATGGCCACCAAGAACTCCCAAGCTTTAAAAAGAATGACTCTCTGTGGCAAGAAAACAAAGAGACACTCCTCCCCTACCTTGCTACTCCCGGTGTGGCTTCCACAC---TGCAACCTGGGACTGTGTA--GTGAGGGGA-GGGGAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102578470 478 - 106955855 CTATGGTAATTCAATGAGTGTGACTACCAGCATAGATGTCCATAAAGAATATCCATTAGGGTCACCCATTTTAATAATGTTCACCAGGACTCTTCAATCAAAACAACATCCACTCTCAGAATAGCTTAGAATCAAAGGAGGACTTTCTGGG-----------TTTT----------------------------------------------------------------------------------------TTT---------GGTT--CAAGAAGGATTGGGCAAGAAAACTGCAGGGAGTGA-AGGAATGCTGAGCTTTGGAAGCAATTAGAACCAAGAAAACAAAAGCTGAAAGCACTGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAGTCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGCGAGACAGATGGCCACCAAGAACTCCTAAGCTTTAAAAAGAATGACTCTCTGTGGCAAGAAAACGCAGAGACACTCCTCCCCCACCTTGCTACTCCCCATGCGGCTTCCACAC---TGCAACCTGGGACTGTGTA--GTGAGGGGA-GGGGAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59870913 497 + 64156825 CTATGGTAATTCAATGAGTGTGACTCCCAGCATAGATGTCCATAAAGGATATCCATTAGGGTCACCCATTTTAATACTGTTTGCCAGGACTCTTCAATCAAAACAAAATCCATTCTCAGAATAGCTGAGAATCAAAGGAGGACTTTTTGGTTTTCTG-----TTTTGTT---TTT----------------------------------------------------------------TTT--------TTTTTTT---------GGTT--CAAGAATGATTGAGCAAGAACACTGCAGGGAGTGA-AGGAATGCTGAGCTTTGGAAGCAATTAGAACCAAGAAAACAAAAGCTGAAAGCCTTGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAATCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGTGAGACAGATGGTCACCAAGAACTCCCAAGCTTTAAAAAGAATGACTCTCTATGGCAAGAAAACAGAGAGACACTCCTCCCCCACCTTGCTACTCCCCATGTGGCTTCCACAC---GGCAACCTGGGGCTGTGTA--GTGAGGGGA-GGGGAGC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47010716 500 + 51301725 CTATGGTAATTCAATGAGTGTGACTCCCAGCATAGGTGTCCATAAAGGATATCCATTAGGGTCACCCATTTTAATACTGTTTGCCAGGACTCTTCAATCAAAACAAAATCCATTCTCAGAATAGCTGAGAATCAAAGGAGgactttttggttttctgtttttttttttt---ttt----------------------------------------------------------------ttt--------ttttttt---------ggtt--caagaaTGATTGAGCAAGAACACTGCAGGGAGTGA-GGGAATGCTGAACTTTGGAAGCAATTAgaaccaagaaaacaaaagctgaaagccttGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAATCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGCGAGACAGATGGTCACCAAGAACTCCCaagctttaaaaagaatgacTCTCTGTGGCAAGAAAACAGAGAG--ACTCCTCCCCCACCTTGCTACTCCCCATGTGGCTTCCACAC---GGCAACCTGGGGCTGTGTA--GTGAGGGGA-GGGGAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46723093 487 + 50890351 CTATGGTAATTCAATGAGTGTGACTCCCAGCATAGATGTCCATAAAGGATATCCATTAGGGTCACCCATTTTAATACTGTTTGCCAGGACTCTTCAATCAAAACAAAATCCATTCTCAGAATAGCTGAGAATCAAAGGAGGACTTTTTGGT-----------TTTTGGT---TTT----------------------------------------------------------------TTT--------TGGGGGG---------GGTT--CAAGAATGATTGAGCGAGAACACTGCAGGGAGTGA-AGGAATGCTGAGCTTTGGAAGCAATTAGAACCAAGAAAACAAAAGCTGAAAGCCCTGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAATCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGTGAGACAGATGGTCACCAAGAACTCCCAAGCTTTAAAAAGAATGA----CTGTGGCAAGAAAACAGAGAGACACTCCTCCCCCACCTTGCTACTCCCCATGTGGCTTCTACAC---GGCAACCTGGGGCTGTGTA--GTGAGGGGA-GGGGAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45292570 553 + 49145316 CTGTGGTAATTAAA--AGTCAGACTCCCAGCAGAGATGTCCATAAGGGACCTCCATTAGGGTCATCAGTTTTTA---TGTTTGCCAGGACTCTTCGATCAAAACAAAATCCATTCTCAGCATAGCTTAGAATCAAAGGAGGACTTTTTGGG-----------TTTTTTT---TTTGGTTCA----AGAATGATTGAGCAGGAAAGCTGCAGGGAGCAGAGGGATGCTGCAAAGGAGGACTTT---CTGGGTTTTTTT---------GGTT--CAAGAATGATTGAGCAGGAAAGCTGCAGGGAGCAG-AGGGATGCTGAGCTTTGGAAGCAATTAAACCCGAGAAAACAAAAGCTGAGAGCACCGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAGTCATCTCTGTGTTTCTGCATCAAGACTGGCTTCCTTCACATGGCGAGACAGATGGCCACCAAGAACTCCCAAGCTTTAAAAAGAATGACTCTCTGTGGCAAGAAAACAGAGAGACACTCCTCCCGCACCTTGCTACTCCCCATGTGGCTCCCACAC---CTCAACTTGGGGCTGTGTAGTGTGAGGGGA-GGGGAGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19457633 516 - 122678785 CTGTAGTGATTT----AGGGTGAATACTGGAGTGGATGTCCATAAATGATATCTGTTAGGGCCGTTGATTTTAACAAGATTTGTCCAGACTCTGC--TCAACACAAAATCTTTTCTTAGACAAGCTCTGACTTAAA--AAACTTTTTTGGG-----------TGTCatttaatttaatttaatttaatttaatttaatttaa-------------------------------------tttaatttaatttTTTTTTCTCTCAGAGGTTTCCAAGAATGATTGAACAAGAAAGCTGCATGGAGAGAGGGGGATGCTGAGTTTTGGAAGCAGTCAGAAGCAAGAAAACAAAAGCTGCAGGCACTCCATCTC-------CTCCGCGGATGCT--CTGAGTCATCTTCTGGTTTCTTGTTAAAGACCTGCTTCCTCCACATGGTGAGACAGATGGCCACCAAGAGCTCCCAAGTTTTAAAGAGAATGA-TTTCCCCGACGAGGGAAC--AGAGGCACTGCTCCCCCATC-CGCTACTCC--------CTCCAGCACCTTGTCAGCCAGGGGGTGTGCA--GGGAGTGGAGGGGGTGC i canFam3.chr1 I 38 I 2044 e macFas5.chr19 54882420 20327 + 59248254 M a score=115955.000000 s hg38.chr19_GL949747v2_alt 10553 52 + 729520 GAAGAAGTTtgcgttagtctgttttcacactgctgataaagacatacctgag s panTro4.chr19 58947395 52 + 63644993 GAAGAAGTTtgcgttagtccattttcacactgctgataaagacatacctgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814502 52 + 60714840 GAAGAAGTTtgcgttagtccgttttcacgctgctgataaagacatacctgag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102578948 52 - 106955855 GAAGAAGTTtgcgttagtctgttttcacactgctgataaagacatacctgag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59871410 52 + 64156825 AAAGAGGTTtgcattagtgcgttttcacaccgctgataaagacatacctgag i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47011216 52 + 51301725 AAAGAGGTTTGCATTAGTCCGTGTTCACaccgctgataaagacatacctgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46723580 52 + 50890351 AAAGAGGTTtgcattagtccgttttcacattgctgataaagacatacctgag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45293123 52 + 49145316 AAAGAGGTTtgcattcgtccatttccacactgctgatgaaaacacagctgag i calJac3.chr22 C 0 I 2087 e canFam3.chr1 19458149 2044 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=8022.000000 s hg38.chr19_GL949747v2_alt 10605 4 + 729520 actg s panTro4.chr19 58947447 4 + 63644993 actg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814554 4 + 60714840 actg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102579000 4 - 106955855 actg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59871462 4 + 64156825 actg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47011268 4 + 51301725 actg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46723632 4 + 50890351 actg i chlSab2.chr6 C 0 I 7 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=11806.000000 s hg38.chr19_GL949747v2_alt 10609 10 + 729520 agtaatttat s panTro4.chr19 58947451 10 + 63644993 agtaatttat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814558 10 + 60714840 ggtaatttat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102579004 10 - 106955855 ggtaatttat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59871466 10 + 64156825 gataatttat i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47011272 10 + 51301725 gataatttat i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e chlSab2.chr6 46723636 7 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=3640.000000 s hg38.chr19_GL949747v2_alt 10619 4 + 729520 tttt s panTro4.chr19 58947461 4 + 63644993 tttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814568 4 + 60714840 tttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102579014 4 - 106955855 tttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59871476 4 + 64156825 tttt i rheMac3.chr19 C 0 I 2 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e chlSab2.chr6 46723636 7 + 50890351 I e papAnu2.chr19 47011282 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M a score=151125.000000 s hg38.chr19_GL949747v2_alt 10623 310 + 729520 atttttatttttatttatttattt-ttttgagacg------cactctgtcacccaggctggagtgcagtggcacgatctccgctcactgcaagctccgcctcccggggtcacaccattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccaccgcgcccggctaattttttgtatttttagtagagacggggtttcactgtgttatccaggatggtctcgatctcctgacctcatgatccacccgcctcggcctcccagagt----gctgggattacaggcgtgagccactgcgcccagtcagttta-c s panTro4.chr19 58947465 317 + 63644993 gtttttatttttatttatttatttattttgagacggagtctcactctgtcacccaggctggagtgcagtggcacgatctccgctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccaccacacccggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgcctgggcctcccagagt----gctgggattacaggtgtgagccactgcacccagtcagttta-c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814572 315 + 60714840 atttttatttttatt--tttattt-tttcgagacggagtctcactctgtcacccaggctggagtgcagtggcacgatctccgctcactgcaagctccgcctcccgggttcaggccattctcctacctcagcctcccgagtagctgggactacaggcgcccgccaccgcgtccagctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatctgcccacctcagcctcccaaagt----gctgggattacaggcgtgagccactgcgcctggccagtttatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102579018 317 - 106955855 attttta--tttatttatttatt--ttttgagacggagtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctccccggttcacgccattctcctgcctcagcctcccaagtagctgggactccaggtgcccacaaccacacccggctaattttttgtatttttagtagagacggggtttcatcgtgttagccaggatggtctcgatctcctgacctcgtgatctgcccgcctcagcctcccaaagtgctggctgggattacaggtgtgagccactgcacccggccagttta-t i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e chlSab2.chr6 46723636 7 + 50890351 I e papAnu2.chr19 47011282 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59871480 2 + 64156825 I a score=6633.000000 s hg38.chr19_GL949747v2_alt 10933 7 + 729520 tttttaa s panTro4.chr19 58947782 7 + 63644993 tttttaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814887 7 + 60714840 tttttaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102579335 7 - 106955855 tttttaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47011282 7 + 51301725 tttttta i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46723643 5 + 50890351 --tttta i chlSab2.chr6 I 7 I 2 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59871480 2 + 64156825 I a score=196784.000000 s hg38.chr19_GL949747v2_alt 10940 120 + 729520 aaaagaggtataacggactt-acagttccacatggctggggaggcctcacaatcatggcagaaggtgaaaggcacat----cttacatggtggcagacgacagagaaatgagagagccaagcaaa s panTro4.chr19 58947789 120 + 63644993 aaaagaggtgtaatggactt-acagttccacatggctggggaggcctcacaatcatggcagaaggtgaaaggcacat----cttacatggtggcagacgacagagaaatgagagagccaagcaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814894 120 + 60714840 aaaagaggtgtaatggactt-acagttccacatggctggggaggcctcacaatcatggcggaaggtgaaaggcacat----cttacatggtggcagacgacagagaaatgagagagccaagcaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102579342 117 - 106955855 aaaagaggtataatggacttaacagttccacacgggt-gggaggcctcacaatcacggcggaaggtgaaaggcacat----cttacatggtggcagacgacagagaa---aatgatacaagcaaa i nomLeu3.chr10 C 0 I 1816 s rheMac3.chr19 59871482 124 + 64156825 aaaaaaggtataatggactc-acagttccacatggctggggaggcctcacaatcatggtggaaggtaaaaggcacatcttacttacatggtggcagacgagagagaaacgagagagccacgcaaa i rheMac3.chr19 I 2 C 0 s papAnu2.chr19 47011290 118 + 51301725 aaaaagagtataatggact---cagttccacatggctggggaggcctcacaatcatggcggaaggtgaaaggcacat----cttacatggtggcagacgagAGAGAAACGAGAGAGCCacgcaaa i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46723650 120 + 50890351 aaaagaggtataatggactc-ccagttccacatggctggggaggcctcacaatcatggtggaaggtgaaaggcacat----cttacatggtggcagatgagagagaaatgagagagccacgcaaa i chlSab2.chr6 I 2 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=1212482.000000 s hg38.chr19_GL949747v2_alt 11060 1036 + 729520 aggggaaacccgttataaaaacctcagctctcctgagacttgttcactaccatgagaacggcatgggggaatgtgtgggtggaggattagccaggtgctgaggcaagagactgaaggcacaaactgttgcagtataataaagaaaa----tagaataagaatagtcataatacaaattagatgtagagatgatcatggacaattatcaatcattattataaacattattaatcattagcttttaatattactctttgctgcattactaatataacctaggaataaccggcgggtatagggtcaggtgctgaagggacatggtgagaagtgacctagaaggcaagaggtgagccctctgtcacgcgtgcatcagggccgcttgaggggtccttggtcaagcggtaacgccagtgtctgggaaggcacccgttacttagcagacggtgaaagggagtctc-ctttccttggaggagtcagggaacactctgctccaccagcttcttgtggaaggctggatattatccaggcctgcccgcagtcatccggaggcctaaacccctccctgtggtgctgtgcttcagtgctcacactccttgtccactttcatgctcctcccgtactcctggctcctctttgaagttcatagtagatagcggtagaagaaatagtgaaagtcttaaagtctttgatctttcttataagtgcatggaagaaaacgctgacgtatgctgccttctccctctctctctgcttcggctacctaagagggaagggccccctctcctgtgatcacacgacttgcttcaccttgtcaatcacttcgaagattcaccctgcttaccctgcccccttatcttgtatgcaataagtatcagcgcgcccagccgttatgggccactaccggtctccgcgtcttgatggttgtggtcctccgggcccagctgttttctctttatctctttgtcttgtgtctttatttcttacaatctcttatctctgcacacggggagaacacctgcaaagccccata-----ggaccctgca s panTro4.chr19 58947909 1039 + 63644993 aggggaaacccgttataaaaacctcagctcttctgagacttgttcactaccatgagaacggcatgggggaatgtgtgggtggaggattagccaggtgctgaggcaaaagactgaaggcaccaactgttgcagtataataaagaaaa----tagaataagaatagtcataatacaaattagatgtagagatgatcatggacaattatcaatcattattataaacattattaatcattagcttttaatattattctttgttgcattactaatataacctaggaataaccggcgggtatagggtcaggtgctgaagggacatggtgagaagtgacctagaaggcaagaggtgagccctctgtcacgcccgcataagggccgcttgaggggtccttggtcaagcggtaacgccagtgtctgggaaggcacccgttacttagcagaccgcgaaagggagtctc-ctttccttggaggagtcagggaacactctgctccaccagcttcttgtggaaggctggatattatccaggcctgcc--cagtcatctggaggcctaaacccctccctgtggtgctgtgcttcagtgctcacgctccttgtccactttcatgctcctcccgtactcctggctcctctttgaagttcatagtagatagcggtagaaggaatagtgaaagtcttaaagtctttgatctttcttagaagtgcatggaagaaaacgctgacgtatgctgccttctccctctctctctgcttcggctacctaagaggaaagggtcccctctcctgtgatcacacgacttgcttcaccttgtcaatcacttcgaagattcaccctgcttaccctgcccccttatcttgtatgcaataagtatcagcgcgcccagccgttatgggccactaccggtctccgagtcttgatggttgtggtccccccggcccagctgttttctctttatctctttgtcttgtgtctttatttcctacaatctcttatctctgcacacggggagaacacctgcaaagccccatagggctggaccctgca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55815014 1042 + 60714840 aggggaaacctgttataaaaacatcagctctcttgagacttgttcactaccatgagaacagcatgggggaatgtgtgggcgaaggattacctaggtgcccagccaagagactgaaggcacaaactgttgcggtataataaagaaaatagttagaataagaata-tcatgatacaaattagatatagagatgatcatggac-attatcaatcattattataaacattattaatcattagcttttaatattactcttcgttgcattactaatataacctaggaataaccggcaggtat-gggtcaggtgctgaagggacatggtgagaagtgacctagaaggcaagcggtgacctctctgtcacgcccgcataagggccacttgaaggctccttgctcaagcggtgacgccagtgtccgggaaggcacccgttacttagcagaccgcgaaagggagtctc-atttccttggaggagtcagggaacactctgctccaccagcttcttgtgggaggctggatgttatccaggcctgcccgcagtcatccggaggcctaaacccctccctgtggtgctgtgcttcaatgctcacgctccttgtccactttcatgctcctcccttactcctgcctcctctttgaagtttgtagtagatagcggtagcggaaatagtgaaagtcttaaaggctttgatctttcttataagtgcatagaagaaaacactgacatatgctgccttctctctctctctctgcttcccctacctaagagggaagggccccctgtcctgtgatcacgtgacttgcttcaccttatcgatcacttagaagattcaccctccttagcctgcccccttgtcttgtatgcaataaatatcagcgcgcccagccgtttggggccactaccggtctccgcgtcttgatggttgtggtcagctgggcccagctgttttctctttatctctttgtcttgtgtctttatttcttacaatctcttatctctgcacacggggagaacacctgcaaagccccgcagggctggaccctgca i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59871606 979 + 64156825 aggggaaacccctt----agatgtcagctctcgtgagacttgttcactaccgcgagaatagcatgggggaatctgtgggtggagggtggcccaggtgcccaggcaagagactgaaggcacaaactgtttcagtataataaagaaaatagttagaataagaatagtcataatacaaattagatatagaggtgatcgtggac-attatcaatcattattataaacattattaa--------------------------------------------------------ggcaggtatagggtcaggtgctgaagggacattgtgagaagtgacctagaaggcaagaggtgagccctctgtcacacctgcataagggccatttgaggtctccttggtgaagcagtaacgccagtgactgggaaggcacccgttacttagcagaccatgaaagggagtctctctttccttggaggagtcagagaacactctgctccaccagcttcttgtgggaggctggatattatccaggcctgcccgtagtcatccggaggcctaaacccctccgtgtggtgctgtgcttcagtggtcacgctccttgtccgctttcatgttcctcccgtactcctggttcctctttgaagttcgtagtagatagcggtagaagaaatagtgagagtcttaaagtctttgatctttcttataagtgcatagaagaaaatattgacgtatgctgcct------actgtctctgcttcggctacctgtaagggaagggccccctgtcccatgatcacgtgatttgcttcaccttatcaatcacctggacaactcaccctccttaccctgcccccttgtcttgtatgcaataaatatcagcacgtccagccgttcggggccactaccagtctccgcgtcttggtggtagtggtccccacggcccaggtgctttctctttatctctttgtcttgtgtctttatttcttacaatctctggtctccgcacatggggagaacgcctgcaaagccccgtagggctggaccctaca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47011408 1031 + 51301725 aggggaaaccccttagaGAGATGTCAGCTCtggtgagacttgttcactaccgcgagaatagcatgggggaatcTGGGGGCGGAGGGTGGCCCAGGTGCCcaggcaagagactgaaggcacaaactgtttcagtataataaagaaaatagttagaataagagtagtcataatacaaattagatatagaggTGATCGTGGAC-ATTATCAATCATTATTATAagcattattaatcattagcttttaatattactctttgttgCGTTACTAATATAACCTAGGAATAACGGGTGGGTATagggtcaggtgctgaagggacattgtgagaagtgacctagaaggcaagaggtgagcccTCTGTCACACCTGCATAAGGGCCATTTGAGGGCTCCTTGGTGAAGTGGTAGCGCCAGTGTCTGGGAAGGCACCTGTTACTTAGCAGACCCCGAAagggagtctc-ctttccttggaggagtcagggaacgctctgctccaccagcttcttgtggaAGGCTGGATATTATTCAGGCCTGCCTGCAGTCATCCGGAGGCCTAAACCCCTCCGTgtggtgctgtgcttcagtggtcatgctccttgtccactttcatgCTCCTCCCgtactcctggttcctctttgaagttcgTAGTAGACAGCGGTAGA------AGTGAGagtcttaaagtctttgatctttcttataagtgcatagaagaaaatattgacgTATGCTGCCT------GCTCTCTCTGCTTCGGCTACCTGtaagggaagggccccctgtcccATGATCACGTGATTTGCTTCACCTTATCAATCACCTGGACAACtcaccctccttaccctgcccccttgtctTGTATGCGATAAACATCAGCACGTCCAGCCATTCGGGGCCACTACCAGTCTCCGcatcttggtggtagtggtccccacGGCCCAGcgtctctctctttatctctttgt-ttgtgtctttatttcttacaatCTCTGGTCTCCGCACATGGGGAGAACACCTGCAAAGCCCtgtagggctggaccctaca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46723770 1037 + 50890351 aggggaaaccccttagagagacgtcagctcttgtgagacttgttcactaccgcgagaatagcatgggggaatctgtgggcggaggatggcccaggtgccgaggcaagagactgaaggcacaaactgtttcagtataataaagaaaatagttggaataagagtagtcgtaatacaaattagatatagaggtgattgtggac-attatcaatcattattataaacattattgatcattagcttttaatattactctttgttgcattgctaatataacctaggaataacgggtgggtatagggtcaggtgctgaagggacattgtgagaagtgacctagaaggcaagaggtgagccttctgtcacacccgcataagggctgcttgagggctccttggtgaagcggtagcgccagtgtctgggaaggcacctgttacttagcagaccgcgaaagggagtctc-ctttccttggaggagtcagggaatgctctgctccaccagcttcttgtggaaggctggatattatccaggcctgtccacaatcatccggaggcctaaa-ccctccctgtggtgctgtgcttcagtagtcacgctctttgtccactttcatgctcctcccatacccctggttcctctttgaagttcgtagtagatagcggtagaagaaatagtgagagtcttaaagtctttgacctttcttacaagtgcatagaagaaaatattgacgtatgctgcct------gctgtctctgcttcggctacctgtaagggaagggccccctgtcccatgatcacgtgatttgcttcaccttattaatcacctggacatgtcaccctccttaccccgcccccttgtcttgtatgcgataaatatcagcgcgtccagccgttcggggccactaccagtctccgcgtcttggtggtagtggtccccacggcccagctgctttctctttatctctttgtcttgtatctttatttcttacaatctctggtctccgcacatgaggagaacacctgcaaagccccttagggctgggccctaca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e nomLeu3.chr10 102579459 1816 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M a score=1257558.000000 s hg38.chr19_GL949747v2_alt 12096 753 + 729520 ggaatccacccccatgattgaattatctcccactgggtccatcccacaacacatgggaattatgggagctacaactgaagatgagatttgggtggggacacagacacaagccatatATCAAGGTTGTTCCTTCAGATGCAGCAATCCTGGGAGCTTCTGGTTAGGACAAGATACAAGC-AGAGACAGCTTCATGGGtattgtaaactcaatgtttgtgtcccgacaaaattcagctgttggaacctaacccca--aggtgatggtattTGtaatacgggagctaaaaagaaattattgaggcagacagtgagggtaagagagtcctcagtaaggtttcctattaataaagagcagcccccaaataatttcttttctaacagaaagcagcctgaaacatcaagctgcaagcatagataaacaagctaaaatcttgcat-------------cagctgtgccaatagaaaacggatgcctgggagccgggtatattcaacatggaggttccctcttcccttttctttgtccccacatgtgcagtaaaaaagcagacaacatggccccggccaggcagagaccctacctacgtaataaaagattagggtgggatggccagcttctttgggggctatgcaaacgtcatacctggtccgactaatctctcaggccctatgtaaatcagacagcacctcctcaagcttgtctataaaagccccatgcatttcaccacaaaaccaggggtcccactcgggaacccctctcttctct-- s panTro4.chr19 58948948 734 + 63644993 ggaatccacccccgtgattgaattatctcccactgggtccatcccacaacacatgggaattatgggagctacaattgaagatgagatttgggtggggacacagacacaagccatatATCAAGGTTGTTCCTTCAGATGCAGCAATCCTGGGAGCTTCTGGTTAGGACAAGATACAAGC-GGAGACGGCTTCATGGGtattgtaaactcaatgtttgtgtcccgacaaaattcagctgttggaacctaacccca--aggtgatggtattTGtaatacgggagctaaaaagaaattatttaggcagacagtgagggtaagagagtcctcagtaaggtttcctgttaataaagagcagcccccaaataatttcttttctaacagaaagcagcctgaaacatcaagctgcaagcatagataaacaagctaaaatcttgcat-------------cagctgtgccaatagaaaacggatgcctgggagccgggtatattcaacatggaggttccctcttcccttttctttgtccccacatgtgcagtaaaaaagcagacaacatggccccggccaggcagagaccctacctacataataaaagattagggtgggatggccagcttctttgtgggctatgcaaacgtcatacctggtccgactaatctctcaggccctgtgtaaatcagacaccacctcctcaagcttgtctacaaaagccccatgcatttcaccacaaaaccagggg-------------------tcttctct-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55816056 765 + 60714840 ggaatccacccccatgattgaattatctcccactgggtccatcccacaacacatgggaattatgggagctacaattgaagatgagatttgggtggggacacagacacaagccatatATCAAGTTTGTTCCTTCAGATGCAGCATTCCTGGGAGCTTCTGGTTAGGACAAGATACAAGC-AGAGACAGCTTCATGGGtattgtaaattcaatgtttgtgtcccgacaaaattcagctgttggaacctaacccca--aggtgatggtattTGtaacacaggagctaaaaagaaattatttaggcagacagtgagggtaagagtgtcctcggtaagttctcctattaataaagagcagcccccaaataatttcttttctaacagaaagcagcctgaaacatcaagctgcaagcatagataaacaagctaaaagcttgcataggtaaatgccggcagctgtgccaatagaaaacggatgcctggaagccgggtatattcaacatggaggttccctcttcccttttctttgtccccatatgtgcagtagaaaagcaggcaacatggccccggccaggcagagaccctacctacataataaaagattagggtgggatggccagcttctttgtgggctatgcaaacatcacacctggtccgactaatctctcaggccctatgtaaatcagacaccacctcctcaagcttgtctataaaagccccatgcatttcaccacgaaatcaggggtcccactcgggcactcctctc-tctct-- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59872585 762 + 64156825 ggaatccgcccccatgattgaattatctcccactgggtccatcccacaaaacatgggaattatgggagctaccattaaagatgagatttgggtggggacgcagacacaagcc--ttatcaAAGTTGTTCCTTCAGATGCAATATTCCTGGGAGCTTCTGGTTAGGACAAGATACAAGC-GGAGACAGCTTCATGGGtattgtaaattcaatgtttgtgtcccgacaaaattcagctgttggaacttaacccca--aggtgatggtattTGtaatacgggagctaaaaagaaatgctttaggcagacagtgagggtaagagagtcctccgtatggtttcctgtgaataaagagcagtccccaaatcatttcttttctaacagaaagcagcccgaaacatcaaggtgcaggcctagacaagcaagctaaaagcttgcataggtaaatgctggcagctgtgccaatagaaaagggatggctggaggccgggtatattcaacatggaggttccctcttcccttttgtttgtccccacatgtgcagtaaaaaaacaggcaacgtggccccagccgagcagagaccccacctatgtaataaaacattagggtgggatagccagcttcttcgtgggttatgcaaacgtcacacctggtccggctaatctctcaggccctatgtaaatccgacaccacctgctcaagtttgcctattaaa-ccccatgcatttcaccatgaaaccaggcatcccactcgggagcccctctc-tatct-- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47012439 762 + 51301725 ggaatccgcccccatgattgaattatctcccactgggtccatcccacaacacatgggaattatgggagctaccattgaagatgagatttgggtggggacgcagacACAAGCC--TTATCAAAGTTGTTCCTTCAGATGCAATATTCCTGGGAGCTTCTGGTTAGGACAAGATACAAGC-GGAGACAGCTTCATGGGTATTGTAAATTCAATGTTTGTGTCCCGACAAAATTCAGCTGTTGGAACTtaacccca--aggtgatggtatttgtAATACGGGAGCTAAAAAGAAATGCTTTAGGCAGACAGTGAGGGTAAGAGAGTCCTCCGTAAGGTTTCCTGTGAATAAAGAGCAgtccccaaatcatttcttttctaacagaaagCAGCCCGAAACATCAAGGTGCAGGCCTAGACAAGCAAGCTAAAAGCTTGCATAGGTaaatgctggcagctgtgccaatagaaaagggatGGCTGGAGGCCGGGTATATTCAACATGGAGGTTCCCTCTTCCCTTTTGTTTGTCCCCACATGTGCAGTaaaaaaaCAGGCACCGTGGCCCCAGCCAGGCAGAGACCCCACCTACGTAATAAAACATTAGGGTGGGATAGCCAGCTTCTTCGTGGGTTATGCAAACGTCACACCTGGTCCGGCTAATCTCTcaggccctatgtaaatcagacaccacctgcTCAAGCTTGCCTATTAAA-CCCCATGCATTTCACCACGAAACCAGGCATCCCACTCGGGAGCCCCTCTC-TATCT-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46724807 761 + 50890351 ggaatccgcccccatgattgaattatctcccactgggtccatcccacaacacatgggaattataggagctaccattgaagatgagatgtgggtggggacgcggacacaggcc--ttatcaAAGTTGTTCCTTCAGATGCAATATTCCTGGGAGCTTCTGGTTAGGACAAGATACAAGC-GGAGACAGTTTCATGGGtattgtaaattcaatgtttgtgtcccgacaaaattcagctgttggaacttaacccca--aggtgatggtattTGtaatacgggagctaaaaagaaatgatttaggcagacagtgagggtaagagagccctcc-taaggtctcctgtgaataaagagccgtccccaaatcatttcttttctaacagaaagcagcccgaaacatcaaggtgcaggcctagacaagcaagctaaaagcttgcataggtaaatgctggcatctgtgccaatagaaaagggatgcctggaggccgggtatattcaacatggaggttccctcttcccttttgtttgtccccacatgtgcagtaaaaaagcaggcaatgtagtcccagccaggcagagaccccacctatgtaataaaagattagggtgggatagccagcttcttcgtgggctgtgcaaacgtcacacctggtccgattaatctctcaggccctatgtaaatcagacaccacctgctcaagcttgtctatcaaa-ccccatgcatttcaccacgaaaccaggggtcccactcgggagcccctctc-tatct-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45295262 765 + 49145316 ggaatctgcccccacgattgaattatctcccactgggtccatcccacaacacatgggaattatgggagctacaactgaagatgagatttgggtggggacacagacacaagcc--atatcaAGGTTGTTCCTTCTGTTGCAGCATTCCTGGGAGCCTCTGGTTAGGACAAGAGTCAAGCGGGGGACAGCTTCATGGGtattgtaaactcagtgtttgtgtcccgacaaaactcagatgctggaacctaaccccaacagctcacggtattagtaatacaggagctaaaacgaaattatttaggcagacagtgagggtaagacagtcctcagtaaggttttccattcctaaagagcagcccccaaatcgtttcttctctaaaagaaagcagcctgaaaaatcaaggtgcaagcatagataagcaagctaacagcttgcataggtaaatgccagcagctgtgcccgtagaaaagggataccctggagcagggtttattctacatggaggctcactctccctttttctttgtccccacatgtgcagtaaaagagcaggaaacatggccctggcgaggtagagaccccacctgc---atgaaagattggggtgggatggcctgcttcttcatgggctatgcagacgtcacagctggtccaaccaatctctcaggccctatgtaaatgagacactgcctcctcaagctcatctataaaactcctgtgcatttcaccacaagatcggaagtcccactcgggagcctctctc-tctctCT i calJac3.chr22 I 2087 I 2053 e canFam3.chr1 19458149 2044 - 122678785 I e nomLeu3.chr10 102579459 1816 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M a score=36035.000000 s hg38.chr19_GL949747v2_alt 12849 33 + 729520 gtgcaaaagagaga--actattctcttttctcttt s panTro4.chr19 58949682 33 + 63644993 gtgcaaaagagaga--actattctcttttctcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55816821 33 + 60714840 gtgcaagagagaga--actattctcttttctcttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59873347 35 + 64156825 gtacgagagagagagtgctattctcttttctcttt i rheMac3.chr19 C 0 I 66 s papAnu2.chr19 47013201 33 + 51301725 GTACGAGAGAGAGa--gctattctcttttctcttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46725568 31 + 50890351 gtacgagtgaga----gctattctcttttctcttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45296027 2053 + 49145316 I e nomLeu3.chr10 102579459 1816 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M a score=19704.000000 s hg38.chr19_GL949747v2_alt 12882 29 + 729520 cttttgcttattaagccttcactc-----ttttt s panTro4.chr19 58949715 31 + 63644993 cttttgcttattaagccttcactc---ttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55816854 34 + 60714840 cttttgcttattaagccttcactccCtttttttt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47013234 27 + 51301725 cttttgtttattaagccttcactt-----ttt-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46725599 29 + 50890351 cttttgtttattaagccttcactt-----ttttt i chlSab2.chr6 C 0 I 76 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45296027 2053 + 49145316 I e nomLeu3.chr10 102579459 1816 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59873382 66 + 64156825 I a score=19758.000000 s hg38.chr19_GL949747v2_alt 12911 47 + 729520 tttttttttttttttgagatggagtctggctctgtcattcaggctgg s panTro4.chr19 58949746 47 + 63644993 tttttttttttttttgagatggagtctggctctgtcattcaggctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55816888 47 + 60714840 ttttgttttttttttgagatggagtctggctctgtcattcaggctgg i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47013261 43 + 51301725 ttaaattttatttttgagcaggagt----ctctgtcattcaggctgg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45296027 2053 + 49145316 I e nomLeu3.chr10 102579459 1816 - 106955855 I e chlSab2.chr6 46725628 76 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59873382 66 + 64156825 I a score=5251.000000 s hg38.chr19_GL949747v2_alt 12958 20 + 729520 agtgcagtggcacgatttcg s panTro4.chr19 58949793 20 + 63644993 agtgcagtggcacgatttcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55816935 20 + 60714840 ggtgcagtggcacaatttcg i ponAbe2.chr19 C 0 I 40 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45296027 2053 + 49145316 I e nomLeu3.chr10 102579459 1816 - 106955855 I e chlSab2.chr6 46725628 76 + 50890351 I e papAnu2.chr19 47013304 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59873382 66 + 64156825 I a score=4133.000000 s hg38.chr19_GL949747v2_alt 12978 45 + 729520 gctcacttcaacctccgcctcccaggtgcaagcaattctcctgcc s panTro4.chr19 58949813 45 + 63644993 gctcactgcaacctccgcctcccaggtgcaagcaattctcctgcc i panTro4.chr19 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e nomLeu3.chr10 102579459 1816 - 106955855 I e chlSab2.chr6 46725628 76 + 50890351 I e papAnu2.chr19 47013304 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59873382 66 + 64156825 I a score=26871.000000 s hg38.chr19_GL949747v2_alt 13023 105 + 729520 tcagcctcccaagtagctgggatgacaggcacccaccactgcgcccagctaatttttatatttttagtagagatggggttt-caccgtgttggtcaggctggtttc s panTro4.chr19 58949858 105 + 63644993 tcagcctcccaagtagctgagatgacaggcacccaccactgcgcccagctaatttttatatttttagtagagatggggttt-caccgtgttggtcaggctggtctc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102581275 106 - 106955855 tcagcctcccaagtagctgggattacaggcacccaccactgttcccagctaatttttgtatttttagtagagacggggtttccaccatgttggtcaggctggtctc i nomLeu3.chr10 I 1816 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e chlSab2.chr6 46725628 76 + 50890351 I e papAnu2.chr19 47013304 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59873382 66 + 64156825 I a score=600.000000 s hg38.chr19_GL949747v2_alt 13128 1 + 729520 g s panTro4.chr19 58949963 1 + 63644993 g i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102581381 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59873448 1 + 64156825 g i rheMac3.chr19 I 66 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e chlSab2.chr6 46725628 76 + 50890351 I e papAnu2.chr19 47013304 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M a score=22129.000000 s hg38.chr19_GL949747v2_alt 13129 36 + 729520 aactcctgatctcaggtgatccgc-cccccactcggt s panTro4.chr19 58949964 36 + 63644993 aactcctgatctcaggtgatccgc-cccctactcggt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102581382 37 - 106955855 aacttctgatctcaggtgatccgtgcccctactcggt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59873449 35 + 64156825 aactcctgacctcagttgatcct--ccccgcctcgac i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47013304 35 + 51301725 aactcctgacctcagttgatcct--ccccgcctcgac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e chlSab2.chr6 46725628 76 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=369809.000000 s hg38.chr19_GL949747v2_alt 13165 296 + 729520 ctcccaaagtcctgagattacaggcgtgagccactgcgcccggccCAgtctctttcactatgtaaggacacagcaagaaggtgccagctatgaaccaggaaaaaagccctcagcagacactgaatctaccagtgctttggtcttggacttccagcctccagaaccatgagaaataactatgtgttgtctgtaagctgccaggtctttggtatgttgatagcagcctggatggactaagacaCTCTCTCCTTCCCTCTCATGCCCTGGACCCTCATCAGGGCCAGAAGTGGTTGGGG s panTro4.chr19 58950000 296 + 63644993 ctcccaaagtcctgagattacaggcgtgagccactgcacccggccCAGTCTAtttcactatgtaaggacacagcaagaaggtgccagctatgaaccaggaaaaaagccctcagcagacactgaatctaccagtgctttggtcttggacttccagcctccagaaccgtgagaaataactatgtattgtctgtaagctgccaggtctttggtatgttgatagcagcctggatggactaagacaCTCTCTCCTTCCCTCTCATGCCCTGGACCCTCATCAGGGCCAGAAGTGGTTGGGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102581419 290 - 106955855 ctcccaaagtcctgagattacaggcgtgagccactgcgcccggccCAgtctctttcactatgtgaggacacagcaggaaggtgccagctatgaaccaggaaaaaagccctcagcagacactgaacctaccagtgctttggtcttggccttccagcctccagaacggtgagaaataactatgtgttgtctgtaagctgccaggtctttggtatgttgatagcagcctggatggactaagacaCTCTCTCCTTCC------TGCCCTGGACCCTCATCAGGGCCAGAAGTGGTTGGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59873484 292 + 64156825 ctcccaaattgctgagattacaggcgtgagccactgcgccctgccCAgtctctttcactacgtgaggatacagcaagaaggtgccagctatgaaccagg-aaaaagccctcagcag--actgaatctaccagtgcttgggtcttggacttgaagccttcagaacggtgagaaataactatgtgttgtctggaagctgcctggtctttggtagattgatagcagcctggatggactgagacGCTCCTTCCTCCC-TCTCATGCCCTGGACCCTCATCAGGGCCAGAAGTGGTTGGGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47013339 292 + 51301725 ctcccaaattgctgagattacaggcgtgagccactgcgccctgcccagTCTCTTTCActacgtgaggacacagcaagaaggtgccagcTATGAACCAGG-AAAAAGCCCTCAGCAG--ACTGAATCTACCAGCGCTTTGGTCTTGGACTTGAAGGCTTCAGAACGGTGAGAAATAACTATGTGTTGTCTGGAAGCTGCCTGGTCTTTGGTACGTTGATAGCAGCCTGGATGGACTAAGacgctccctcctccc-tctcatgCCCTGGACCCTCATCAGGGCCAGAAGTGGTTGGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46725704 292 + 50890351 ctcccaaattgctgagattacaggcgtgagccactgcgccctgccCAgtctctttcactacgtgaggacacagcaagaaggtgccagctatgaaccagg-aaaaagccctcagcag--actgaatctaccagcgctttggtcttggacttgaagccttcagaacggtgagaaataactatgtgttgtctggaagctgcctggtctttggtacgttgatagcagcctggatggactaagacGCTCCCTCCTCCC-TCTCATGCCCTGGACCCTCATCAGGGCCAGAAGTGGTTGGGG i chlSab2.chr6 I 76 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=136227.000000 s hg38.chr19_GL949747v2_alt 13461 91 + 729520 TGATGGCCCAAGCAGACTTTAAAAAGCACTGGCCTAGCACAAGGGTTGGCACGCTAGA-GCCCACAGCTTGTTTTTGCAAATAAAATTTTTT s panTro4.chr19 58950296 91 + 63644993 TGATGGCCCAAGCAGACTTTAAAAAGCACTGGCCTAGCACAAGGGTTGGCACACTGCA-GCCCACAGCTTGTTTTTGCAAATAAAATTTTTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102581709 91 - 106955855 TGATGGCCCAAGCAGACTTTAAAAAGCACTGGCCTAGCACAAAGGTTGGCACACTATA-GCCTACAGCTTGTTTTTGCAAATAAAATTTTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59873776 91 + 64156825 TGATGGCCCAAGCAGACTTTTAAAAGCACTGACCTCGCACAAGGGTTGGAACACTACA-GCCCACAGCTTGTTTTTGAAAACAAAATGTTTT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47013631 91 + 51301725 TGATGGCCCAAGCAGACTTTTAAAAGCACTGGCCTCGCACAAGGGTTGGAACACTACA-GCCCACAGcttgtttttgaaaacaaaatgtttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46725996 91 + 50890351 TGATGGCCCAAGCAGACTTTTAAAAGCACTGGCCTCGCACAAGGGTTGGAACACTACA-GCCCACAGCTTGTTTTTGAAAACAAAATGTTTT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19460193 88 - 122678785 TGGTGATTCATTCAGATTTCAAAAAGCATTGGTCTAGGACAGGTGTTGGCA----ACAggcccatcacttgtgtttgtaaataaagtttttt i canFam3.chr1 I 2044 I 3674 e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=264025.000000 s hg38.chr19_GL949747v2_alt 13552 218 + 729520 GTTTTTAAAACAACTTTCTGggctgggcacggtggctcacgcctgtaatcccagcactatgggaagccgaggcaggcggatgacttgaggtcaggagctcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatac-aaaaaaattagcctggtgtgatggcagaagcttgtaatcccagctactcaggaggctgagacaggagaat s panTro4.chr19 58950387 218 + 63644993 GTTTTTAAAACAACTTTCTGggctgggcacggtggctcacgcctgtaatcccagcactatgggaagccgaggcaggcggatgacttgaggtcaggagctcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatac-aaaaaaattagcctggtgtgatggcagaagcttgtaatcccagctactcaggaggctgagacaggagaat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102581800 218 - 106955855 GTTTTTAAAACAACTTTCTGggctgggcacggtggctcacgcctgtaatcccagcgcttggggaggccgaggcaggcggatcacctgaggtcaagcattcaagaccaacctggccaacatggtgaaaccccatctctactaaaaatac-aaaaaaattggccgggtgtgatgagaaacccctgtaatcccaactactcgggaccctcatacaggagaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59873867 218 + 64156825 GTTTTTAAAACAACTTTCTGggctgggcgcagtggctcacgcctgtaatcccagctctttgggaggctgaggtgggtggatcacttgaggtcaggagctcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatac-aaaaaaattagctgggcgtggtggcagacgcctgtaatcccagctactcggaaggctgagacaggagaat i rheMac3.chr19 C 0 I 14 s papAnu2.chr19 47013722 219 + 51301725 gtttttaaaacaactttctgggctgggcgcagtggctcacacctgtaatcccagctctttgggaggctgaggtgggtggatcacttgaggtcaggagctcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaaaaattagctgggcgtggtggcaggcgcctgtaatcccagctactcggaaggctgagacaggagaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46726087 218 + 50890351 GTTTTTAAAATAACTTTCTGggctgggcacagtggctcccgcctgtaattccagctctttgggaggctgaggtgggtggatcacttgcagtcaggagcttgagaccagcctggccaacatggtgaaaccccatcactactaaaaatac-gaaaaaattagctgggcgtggtggcagacgcctgtaatcccagctactcggaaggctgagacaggagaat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=62407.000000 s hg38.chr19_GL949747v2_alt 13770 85 + 729520 catttgaacctgcggggagaggttgcagcgagctgagatcacgccactgcactctggcgcctgggcgacagagcaagactccatc s panTro4.chr19 58950605 85 + 63644993 catttgaacctgcagggagaagttgcagcgagctgagatcacgccactgcactctggagcctgggcgacagagcaagactccatc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102582018 85 - 106955855 catttgatcctttttggtgtggtgactgcgagctgacatcgcaacactgcattccggtgccggggtgacagagcatgactccttc i nomLeu3.chr10 C 0 I 3 s papAnu2.chr19 47013941 85 + 51301725 cacttgaacctgccgggggaggttgcagcgagctgagatcacgccactgcactctggcgcctgggcgacagagcaagactccata i papAnu2.chr19 C 0 I 14 s chlSab2.chr6 46726305 85 + 50890351 catttgaacctgccgggggaggttgcagcgagctgagatcacgccaccgcactctggcgcctgggcgacagagcaagactccatc i chlSab2.chr6 C 0 I 12 e canFam3.chr1 19460281 3674 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59874085 14 + 64156825 I a score=48488.000000 s hg38.chr19_GL949747v2_alt 13855 43 + 729520 aaaaaaaaaaaaaCtttctatagatacataata-tttatgcata s panTro4.chr19 58950690 40 + 63644993 ---aaaaaaaaaCCtttctatagatacataata-tttatgcata i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102582106 44 - 106955855 aaaaaaataaaTCCTTTGTatggatacaaaatattttatgcata i nomLeu3.chr10 I 3 C 0 s rheMac3.chr19 59874099 43 + 64156825 aaaaaaaaaaaatctttctatagatacataata-tttatgcata i rheMac3.chr19 I 14 C 0 s papAnu2.chr19 47014040 43 + 51301725 aaaaaaaaaaaaactttctatagatacataata-tttatgcata i papAnu2.chr19 I 14 C 0 s chlSab2.chr6 46726402 43 + 50890351 aaaaaaaaaaaaaCtttctatagatacataata-tttatgcata i chlSab2.chr6 I 12 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=155676.000000 s hg38.chr19_GL949747v2_alt 13898 100 + 729520 tttatgacatacatgtgatagtttg------------------------------------------atacatgcacagaatgtataatactcaaattagggtatttaggatattc-accacctcaaacatttatcttt-tttt s panTro4.chr19 58950730 100 + 63644993 tttatgacatacatgtgatagtttg------------------------------------------atacatgcacagaatgtataatactcaaattagggtatttaggatattc-accacctcaaacatttatcttt-tttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55816995 100 + 60714840 TTTATGACAtacatgtgatagtttg------------------------------------------atacatgcacagaatttataatactcaaatcagggtatttaggatattc-accacctcaaacatttatcttt-tttt i ponAbe2.chr19 I 40 C 0 s nomLeu3.chr10 102582150 96 - 106955855 tttatgacatacatgtgatag-ttg------------------------------------------atacatgcacagaatgtataatactcaaatcagggtatttaggatattc-acca-ctcaaacatttatcttt-tt-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59874142 144 + 64156825 tttatgacatacatgtgacagtttgatacatgtgacagtttgatacagtttgatacatgacagttttatacatgcacagaatgtataatactcaaatcaggatatttaggatattctgctacctcaaacatttatctttctttt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47014083 102 + 51301725 tttatgACATACATGTGACAGTTTG------------------------------------------ATACATGCACAGAATGTATAATactcaaatcagggtatttaggatattctgctacctcaaacatttatctttctttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46726445 99 + 50890351 tttatgacatacatgtaacagtttg------------------------------------------atacatgcacagaatgtataatactcaaatcagggtatttaggatattctgctacctcaaacatttatct---tttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e calJac3.chr22 45296027 2053 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=92922.000000 s hg38.chr19_GL949747v2_alt 13998 55 + 729520 ttatcttttcgagacagagtctctctct-gtcgcccaggctggagtacagtggtgt s panTro4.chr19 58950830 55 + 63644993 ttttcgtttcgagacagagtctctctct-gtcgcccaggctggagtacagtggtgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55817095 54 + 60714840 tttt-ttttcgaaacaaagtctctctct-gtcgcccaggctggagtacaggggtgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102582246 50 - 106955855 -----ctttcgagacagagtctctctct-gtcacccaggctggagtacagtggtgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59874286 51 + 64156825 ttttcctttcgagacagag----tctct-gttgcccaggttggaatgcagtggtgt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47014185 51 + 51301725 ttttcctttcgagacagag----tctct-gttgcccaggttggagtgcagtggtgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46726544 51 + 50890351 ttttccttttgagacagag----tctct-gttgcacaggttggagtgcagtggtgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45298080 56 + 49145316 ttgttgttctgagatggagtttcgctctcgtttcccaggctggagtgcagtggcac i calJac3.chr22 I 2053 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=702425.000000 s hg38.chr19_GL949747v2_alt 14053 415 + 729520 gatcttggctcactgcaacctctgcctcccgagttcaagcaattcttctgcctcagcctcccaagtggctgggattacaggtgtgcgccaccacacccagctaatttttgtatttttagtggagatggggtttcaccttgttggccaggctggtcttgaactcctgacctcaggtgatccacccatcttggcctctcaaagtgttgggattacaggagtgagccactgcacctggctcatttatcgtttgtgttgggaatgtttcaaatcttctcttctagctattttgaaatatacaatatattgctgttaactatagtcacccttctgtgctattgaacacttgaacttattccttctatccaactgtgtttgtgcccattaactatcccaccccttctagcctttgataact s panTro4.chr19 58950885 415 + 63644993 gatcttggctcactgcaacctctgcctcccgagttcaagcaattcttctgcctcagcctcccaagtggctgggattacaggtgtgcaccaccacacccagctaatttttgtatttttagtggagatggggtttcaccatgttggccaggctgctcttgaactcctgacctcaggtgatccacccatcttggcctcccaaagtgttgggattacaggagtgagccactgcacctggctcatttatcgtttgtgttgggaatgtttcaaatcttctcttctagctattttgaaatatacaatatattgctgttaactatagtcacccttctgtgctattgaacacttgaacttattccttctatccaactgtgtttgtgcccattaactatcccaccccttctagcctttgataact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55817149 410 + 60714840 gatcttggctcactgcaacctccgcctcccaggttcaagcgattcttctgcctcagcctcccaagtggctgggattacaggcatgcacaaccacacccagctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccatcttggcctcccaaagtgtt-ggattacaggagtgagccactgcacctggcccatttatcgtttgtgtttggaacgtttcaaatcttctcttctagctattttgaaatatacaatatattgttgttaactatagttacccttctgtgctattgaacacttgaacttattccttttat----ctgtgtttgtgcccactaactatcccaccccttctagcctttgataact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102582296 415 - 106955855 gatcttggctcactgtaacctccgcttcccgggttcaagcaattcttctgccccagcctcccaagtggctgggattacaggcgtgcaccaccacacccagctaatttttgtatttttagtagagatggggtttcaccatgttggccgggctggtcttgaacgcctgacctcaggtgatccacccatcttggcctcccaaagtgttgggattacaggagtgagccactgcacctggctcgttgatcatttgtgttgggaatgtttcaaatcttctcttctagctgttttgaaatatacaatatattgttattaactatagtcacccttctgtgctattgaacatttgaacttattccttctatctaactgtgtttgtgcccattaactatcccaccccttctagcctttgataact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59874337 415 + 64156825 gattttggctcactgcaacctctacctcctgggttcaagtgattcttctgcctcagtctcccaagtagctgggattacaggcatgcaccaccacacccaattaatttttgtatttttagtagagacggggtttcaccatgttggccaggctggtcttaaactcctgacctcaggtgatccacctgtcttggcctcccaaagtgttgggattacaggagtgagccactgcacctggctcatttatcatttgtgttgggaaagtttcaaatcttctcttctagctattttgaaatatacaatgtactgttgttaactatagtcacccttctgtgctgttgaacacttgaacttgttccttctgtttaactgtgtttgtgcccgttaactaaccCACCCCTTCTAGCCTGTGATAACT i rheMac3.chr19 C 0 I 334 s chlSab2.chr6 46726595 415 + 50890351 gattttggctcactgcaacctccacctcctgggttcaagtgattcttctgcctcagtctcccaagtagctgggattacaggcatgcgccaccacacccaattaatttttgtatttttagtagagacggggtttcaccatgttggccaggttggtcttaaactcctgacctcaggtgatccacccgtcttggcctcccaaagtgttgagattacaggagtgagccactgcacccggctcatttatcatttgtgttgggaaagtttcaaatcatctcttctagctattttgaaatatacaatgtactgttgttaactatggtcacccttctgtgctgttgaacacttgaacttgttccttctgtttcactgtgtttgtgcccattaactaacccaccccttctagcctgtgataact i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45298136 408 + 49145316 catcttggctcacggcaacctccgcctcccaggatcaagcaattctcgtgcctcagcctcccgagtagctgggattacaggcgtgcgccaccacacccggctaa-ttttgtatttttagtagagatgaggtttctccatgttggccaggctggtctcaaaca-ctgacctcaggtgatccacccgcctcagcctcccaaagtgttgggagtacaggagtgagccactgcgcccggcTcgtttatcatctgtgttggggatgtttcaaatctcctcctctagctgttgtgaactgtacaatacattgttataaactgtagtcacccttctgtgctgcccaacactt-cacttattcttcctct----ccgcgtttgtgcccattaactaacccgccccttctagcctctgataact i calJac3.chr22 C 0 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e papAnu2.chr19 47014236 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M a score=471.000000 s hg38.chr19_GL949747v2_alt 14468 2 + 729520 ga s panTro4.chr19 58951300 2 + 63644993 ga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55817559 2 + 60714840 ga i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45298544 2 + 49145316 ca i calJac3.chr22 C 0 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e nomLeu3.chr10 102582711 0 - 106955855 C e chlSab2.chr6 46727010 0 + 50890351 C e papAnu2.chr19 47014236 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59874752 334 + 64156825 I a score=499590.000000 s hg38.chr19_GL949747v2_alt 14470 321 + 729520 ctctctctttaccttcatgagatctacttttttagctcctac--atgagtgagaacatgAAGttgtaaataaagttttattctaacaccgccacaccta---cttgtttacatatcagcgatggctgctttcatggtacaacagcagagtggggtagtctcagcagagatcctacagcccacaaagctggacgtgttactctctggtcctttTGTTTTCTGCCCTCTGGTCTAGGAGTTTGCAGCTCTGGGCGttttttgtttttttttttttttttttttgagatggagtctcactccattgcccaggctggaattcaatggcgc s panTro4.chr19 58951302 317 + 63644993 ctctctctttaccttcatgagatctacttttttagctcctac--atgagcgagaacatgAGGttgtaaataaagttttattctaacactgccacaccta---cttgtttacatatcagcgatggttgctttcatggtacaacagcagagtggggtagtctcagcagagatcctacagcccacaaagctggacgtgttactctctggtcctttTGTTTTCTGCCCTCTGGTCTAGGAGTTTGCAGCTCTGGGCgttt----tgttttgttttgttttgttttgagatggagtctcactccattgcccaggctggaattcaatggcgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55817561 315 + 60714840 --ctctctttacctccatgagagccatttttttagctcccac--gtgagtgagaacatgAGGttgtaaataaagttttattcgaacaccaccacaccta---cttatttacatatcagccatggctgctttcatggtacaacagcagagtggggtagtctcagcagagatcctacagcccacaaagctggacttgttactctctggccctttTGTTTTCTGCCCTCTGGTCTAGGAGTTTGCGGCTCTGGGCGttt----ttttttgtttttttttcttttgagatggagtctcactccgttgcccaggctggaatgcaatggcgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102582711 314 - 106955855 --ctctctttaccttcatgagatctacttttttagctcccac--atgagtgagaacatgaggttgtaaataaagttttattcgaacaccgccactccta---cttgtttacatgtcagcgatggctgctttcatggtacaacagcagagtggggtagtctcagcagagatcctacagcccacaaagctggacgtgttactctctggtcctttTGTTTTCTGCCCTCTGGTCCAGGAGTTTGCAGCTCTGGGCGttt----tttgtt-ttgtttttttttttgagatggagtctcactccgttgcccaggctggagtgcaatggcgc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59875086 304 + 64156825 CTCTctctttaccatcataagagccacttttttagctcccac--atgaatgagaacatgAGGttgtaaataaagttttattcgaacaccgccacatcta---cttgtttacatatcaacgatggctgctttcatggtacaacagcagaatggggtagtctcagcagagatcctacagcccacaaagctgggaatgttactctctggtcctttTATTTTCTGTCCTCTGGTCTAGGAGTTTGCAGGTCTGGGCGTGt----------------ttgttttttgagatgga-tctcactctgttgcccaggttggagtgcaatggtgt i rheMac3.chr19 I 334 C 0 s chlSab2.chr6 46727010 304 + 50890351 ctctctctttaccttcataagagccagttttttagctcccac--atgaatgagaacatgAGGttgtaaataaagttttattcgaacaccgccacatcta---cttgtttacatatcaaagatggctgctttcatggtactacagcagaatggggtagtctcagcagagatcctacagcccagaaagctggaaatgttactctctagtcctttTGTTTTCTGCTCTCTGGTCTAGGAGTTTGCAGGTCTGGGGGTGt----------------ttgttttttgagatgaa-tctcactctgttgcccaggttggagtgcaatggtgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45298546 315 + 49145316 ctctctctttaccttcacgaggtccacctttttagctcccacatatgagtgagaacatgAGGttgtaaataaagttttattcaaacaccaccacacctacttcttgtttacatatcagcaatggctgctttcatggtacaa---cagaatggggtaacctcagcagagatcctactacccacaaagctggaaatgttactctctgctcctttTGTTTTCTGTTCTCTGGTCTAGGAATTTGCAGGTCTGGGCTTtt--------tgtttgtttgtttgtttgaggtggaatctcaccctgttgaccaggctggggtgcaatggtgc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e papAnu2.chr19 47014236 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M a score=941058.000000 s hg38.chr19_GL949747v2_alt 14791 417 + 729520 catctcagctcactgcaatctctgcctcctgggttcaagcgattcttct-gcctcagtctcccaagtagcggggattacaggcgcctgccaccacgtccaactaattttttatttttagtagagatgggatttcaccatgttggtcaggctggtcttgaactctgacctcagatgatccacccacctcggcctcccaaagtgctgggatgacaggcgtgag----------------ccCGGCCGTTTTCTTTTTTGCTTGTTGTGCTTCCTGGAGATGCTCAGTAATTCTTACATTCTTTCCTGGATAGCTGGTCAATCATTATTTATTATTTCCTTGAATTGTTCTAGGAGGAAATGTGGGGTAGAAAGAGTATGGTGGGGTTCTTGGGCATGAATAATCCATAAATAAGTCAGATTTCTTTTTAAGACGAG s panTro4.chr19 58951619 417 + 63644993 catctcagctcactgcaatctctgcctcctgggttcaagcgattcttct-gcctcagtctcccaagtagctgggattacaggcacccgccaccacgtccaactaattttgtatttttagtagagatgggatttcaccatgttggtcaggctggtcttgaactctgacctcagatgatccacccacctcggcctcccaaagtgctgggatgacaggcgtgag----------------ccCGGCCGTTTTCTTTTTTGCTTGTTGTGCTTCCTGGAGATGCTCAATAATTCTTACATTCTTTCCTGGATAGCTGGTCAATCATTATTTATTATTTCCTTGAATTGTTCTAGGAGGAAATGTGGGGTAGAAAGAGTATGGTGGGGTTCTTGGGCATGAATAATCCATAAATAAGTCAGATTTCTTTTTAAGATGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55817876 417 + 60714840 catcccggcccactgcaatctctgcttcctaggttcaagcgattctctt-gcctcagtctctcaagtagctgggattacaggcgcccgccaccacgtccaactaattttgtatttttagtagagatgggatttcaccatgttggtcgggctggtcttgaactctgacatcagatgatccagccgcctcagcctcccaaagtgctgggatgacaggcgtgag----------------ccCGGCCATTTTCTTTTTTGCTTGTTGTGCTTCCTGGAGATGCTCAATAATTCTTACATTCTTTCCTGGATAGCTGGTCAATCATTATTTATTATTTCCTTGAATTGTTCTAGGAGGAAATGTGGGGTAGAAAGAGTATAGTGGGGTTCTTGGGCATGAATAATCCATAAATAAGTCAGATTTCTTTTTAAGATGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102583025 411 - 106955855 catctcggctcactgc-atctctgcctcctggg-tcaagcgattctcctggcttcagtctcccagtaagctgggattacaggcgcccaccaccacgtccaactaa-ttagta-ttttagtagagatgggatttcaccatgttggtcaggctggtcttgaactctgacctcagatgatccacccgccccggcctcccaaagtgctgggatgacaggtgtgag----------------ccCGGCCATTTTCTTTTTTGC---TTGTGCTTTCTGGAGATGTTCAATAATTCTTACATTTTTTCCTGGATAGCTGATCAATCATTATTTCTTATTTCCTTGAATTGTTCTAGGAGGAAATGTGGGGTAGAAAGAGTATGATGGGGTTCTTGGGCATGAATAATCCATAAATAAGTCAGATTTCTTTTTAAGATGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59875390 417 + 64156825 catctcagctcactgcaacctctgcctcctgggttcaagcgattctctt-gcctcagcctcccaagtagctgggattacgggcgcccaccatcatgtcccgctaattttgtatttttagtagagatgggatttcaccatgttggtcaggctggtcatgaactctgacctcagatgatccacccgcctcggcctcccaaagtgccgggatgacaggcatgag----------------ccTGGCCATTTTCTTTTTCGCTTGTTGTGCTTCCAGGAGATGCTCCATAATTCTTACATTCTTTGCTGGATAGCTGATCAATAATTATTTATTATTTCCTTGAATTGTTCTAGGAGGAAATGCGGGGTAGAAAGAGTATGGTGGGGTCCTTGGGCATGAATAATCCATAAATAAGTCAGATTTCTTTTTAAGATGAG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47014236 413 + 51301725 catctcggctcactgcaacctctgcctcctgggttcaagcgattctctt-gcctcagcctcccaagtagctgggattacaggcgcccaccaccatgtcccactaattttgtatttttagtagagatgggatttcaccatgttggtcaggctggtcatgaactctgacctcagatgatccacccgcctcggcctcccaaagtgccgggatgacaggcatgag----------------cctggccgTTTTCTTTTTCGCTTGTTGTGCTTCCAGGAGATGCTCCATAATTCTTACATTCTTTGCTGGATAGCtgatcaataattatttattatttccttgaatTGTTCTAGGAGGAAATGTGGGGTAGAAAGAGTATGGTGGGGTTCTTGGGCATGAATAATCCATAAa----tcagatttctttttaagatgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46727314 417 + 50890351 catctcagctcactgtaacctctgcctcctgggttcaagcaattctctt-gcctcagcctcccaagtagctgggattacgggcgcccaccaccatgtcccgctaattttatatttttagtagagatgggatttcaccatgttggtcaggctggtcatgaactctgacctcagatgatccacccgcctcggcctcccaaagtgccgggatgacaggcctgag----------------ccTGGCCGTTTTCTTTTTCGCTTGTTGTGCTTCCAGGAGATGCTCCATGATTCTTACATTCTTTGCTGGATAGCTGATCAATAATTATTTATTATTTCCTTGAATTGTTCTAGGAGGAAATGCGGGGTAGAAAGAGGATGGTGGGGTTCTTGGGCATGAATAATCCATAAATAAGTCAGATTTCTTTTTAAGATGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45298861 428 + 49145316 catctcggctcactgcaacctctgcctcctgggttcaagcgattttcct-gcctcaccctcccgagtaagtgggattgcaggcgcccatcaccacacccagctaattttgtatttttaatagagatgggatttcaccatgttggccaggctggtcttgaactctgacctcagccgagccacctgcctcagcctcctgaagtgct-ggattacaggcgtgcgccaccaagcccggccCCCTGGCCATTTTCTCTTTTGTTTGTTGTGCTTCCTGGAGAGGTTCAATAATACTTGCATTCTCTGCTGGATAGCTGATCAATAATAA----TTATTCCCTTGAATTGTTCTAGGAGGAAATGTGGGGTAGAAAGAGTGTGGTGGGGTTCTGGGGCATGAATACTCCGTAAATAAGCCAGATTTCTTTTTAAGATGAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=949861.000000 s hg38.chr19_GL949747v2_alt 15208 376 + 729520 AAACTTAATTTTATTGATATGGACGAAGAGCAAGGAA-ACACAGT-ATCTGCATCTCCAGATTTCCGATAACCTTGGCCAGCACGATCCCC--------CCTCCTTTAGTGGCCAGGGCTGTCTTCTTGCTACACTTTCAGTGCCGCATATTCATGAGATCCTGGGGGCTCCTGGGTGGTGT-CTGAAGCTGCCTCAGACAGGGCGCTGGTGCTTAGCTCAGCATAGGTCACTCC-TTGGGGG--TCTGCCGTCTTTGGAGAAAATAGATGAATA-----------TTAGAACTGAG-tgttcaatatggcagccactagccacacatggctattgacatttaagttaattacaattaaatttaatttaaaacccaggtcctcggtcacaccagatgcattt s panTro4.chr19 58952036 377 + 63644993 AAACTTAATTTTATTGATATGGACGAAGAGCAAGGGACACACAGT-ATCTGCATCTCCAGATTTCCGATAACCTTGGCCAGCACGACCCCC--------CCTCCTTTAGTGGCCAGGGCTGTCTTCTTGCTACACTTTCAGTGCCGCATATTCACGAGATCCTGGGGGCTCCTGGGTGGTGT-CTGAAGCTGCCTCAGACAGGGCGCTGGTGCTTAGCTCAGCATAGGTCACTCC-TTGGGGG--TCTGCCGTCTTTGGAGAAAATAGATGAATA-----------TTAGAACTGAG-tgttcaatatggcagccactagccacacatggctattgacatttaagttaattacaattaaatttaatttaaaatccaggtcctcagtcacaccagatgcattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55818293 380 + 60714840 AAACTTAATTTTATTGATACGGATGAAGAGCGAGGGACACAGAGTCATCTGCATCTCCACGTTTCCGATAACCTTGGCCAGCACAATCCCC--------CCTCCTTTAGTGGCCGGGACTGTCTTCTTGCTACACTTTCAGTGCTGCATATTCATGAGATCCTGGGGGCTCCTGGGTGGTGT-CAGAAGCTGCCTCAGACAGGGCACTGGTGCTTAGCTCAGCATAGGTCACTCCTTTGGGGG--TCTGCTGTCTTTGGAGAAAATAGATGAATA----------TTTAGAACTGAG-tgttcaatatggcagccactagccacacatggctattgacatttaaattaattacaattaaatttaatttaaaatccaggtcctcggtcacaccagatgcattt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102583436 378 - 106955855 AAACTTAATTTTATTGATACGGATGAAGAGCAAGGGACACAGAGTCATCTGCATCTCCATGTTTCCGATAGCCTTGGCCAGCACGATCCCC--------CATCCTTTAGTGGCCGGGGCTGTCTTCTTGCTACACTTTCAGTGCTGCATATTCATGAGATCCTGGGGGTTCCCGGGTGGTGT-CGGAAGCTGCCTCAGACAGGGCGCTGGTGCTTAGCTCAGCATAGGTCACTCT-TTGGGGG--TCTGCCGTCTTTGGAGAAAATAGATGAATA-----------TTAGAACTGAG-tgttcaatatggcagccactagccacacatggctattgacatttaaattaattacaattaaatttaatttaaaatccaggtcctcggtcacaccagatgcattt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59875807 373 + 64156825 AAACTTAATTTTATTGATACGGATGAGGAGCAAGGGACACAGAGTCATCCGCATCTCCACGTTTCTGATAACCTTGGCCAGCACGATCCCC--------CCTCCTTTAGTGGCCCGGGCTGTCTTCTTGCTACACTTTCACTGCCGCATATTCATGAGATCCTGGGGGCTCCTGGGTGGTGT-CAGAAGCTGCCTCAGACAGGGCATTGATGTTTAGCTCAGCATACGTCACTCC-TTGGGGG--TCTGCCGTCTTTGGAGAAAATAGATGAATA-----------TTAGAACTGAG-TGGTcaatatggcagccactagctacacgtggctattgacatttaaattaattac-----aattaaattcaaactccaggtcctcggtcacaccacatgcattt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47014649 378 + 51301725 aAACTTAATTTTATTGATACGGATGAGGAGCAAGGGACACAGAGTCATCTGCATCTCCACGTTTCTGATAACCTTGGCCAGCATGATCCCC--------CCTCCTTTAGTGGCCCGGGCTGTCTTCTTGCTACACTTTCACTGCCGCATATTCATGAGATCCTGGGGGCTCCTGGGTGGTGT-CAGAAGCTGCCTCAGACAGGGCATTGATGTTTAGCTCAGCATACGTCACTCC-TTGGGGG--TCCGCCGTCTTTGGAGAAAATAGATGAATA-----------TTAGAACTGAG-TGGtcaatatggcagccactagctacatgtggctattgacatttaaattaattacaattaaattaaattaaaaatccaggTCCTTGGTCACACcacatgcattt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46727731 378 + 50890351 AAACTTAATTTTATTGATACGGATGAGGAGCAAGGGACACAGAGTCATCCGCATCTCCACGTTTCTGATAACCTTGGCCAGCACGATCCCC--------CCTCCTTTAGTGGCCCGGGCTGTCTTCTTGCTACACATTCACTGCCGCATATTCATGAGATCCTGGGGGCTCCTGGGTGGTGT-CAGAAACTGCCTCAGACAGGGCATTGATGTTTAGCTCAGCATACGTCACTCC-TTGGGGG--TCTGCCGTCTTTGGAGAAAATAGATGAATA-----------TTAGAACTGAG-TGGTcaatatggcagccactagccacacgtggctattgacatttaaattaattacaattaaattaaattcaaaatccaggtccttggtcacaccacatacatgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45299289 382 + 49145316 AAACTTAATTTTATTGATACGAATGAGAAGCAAGGGACAC--GGTCATCCACATCTCCACATTTTCAATGACCTCAGCCGGCACAATACCC--------CCTCCTTCGGTGGCCTGTGTTGTCTTGTTGCTACACTTTCAGTGCCACATATTCGTGAGATCCTGGGGGCTCCAGGGTAGTGT-CAGCAGCTGCCTCAGACAGGGCGTGGGTGCTTAGCTCAGCAGAGGTCACTCC-TTGGGGG--TCTGCGGTCTTTGGGGAAAACACACGAACACAGACACGCATTGAACACTGAG-TGGTcagtatggcaaccactagccacccatggctcttgatgtttaaattaattac-----agttaaatttaaaatccaggtcctcggtcacgcgagatgcattt i calJac3.chr22 C 0 C 0 s canFam3.chr1 19463955 381 - 122678785 aaacttaattttattactatggattATGAACTAAGGACAC--AGTGACCTG-GTTGCCATGTGTCCAGTCATCC---CCAGCATGTTAACCCATGTTCTCCTTCTCCAGGGGTCCG-GCTG--TTCTTCCTTCACCTGCCGCACTGCACATTCACAAGATCCTGGGGACTCCTCGGTGGGGCACAGAAGCTGCCTTAGGTGGTGCCTTGGGGTTTAGATCAGCATGGCTCACTCC-CTGGGGGGTCTTTCAGTCTTTGAGAAAGAGAGACAGGAT-----------TTAGAGCTTAgctgtccaatatggtacctacaacccacatatggctatttacatgtaagcaaattaaaattacatttaatttaaagctcaggtcctcagtcacagcaggtacagtt i canFam3.chr1 I 3674 I 1974 e macFas5.chr19 54882420 20327 + 59248254 M a score=937443.000000 s hg38.chr19_GL949747v2_alt 15584 478 + 729520 cTTTTTCTTTTCTGTTTTTATAACCCTTTATGCCTGTGACATCAATGGATCTGCGTAAGCCTTTTTTCAttttttttaaatttttatttatttatttattttgggacagagtctggctc-tgtcgcccaggctggagtgcggtggcgtgatctcggctcactgcaacctccgcctcccgggttcaagccattctcctggctcagcctcctgagtagctgggattacaggcgcccactaccacgcccagctaattttttgtatctttagtagagatggggtttcaccatgttaaccaggatggtctcgatctcctgacctc--atgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgc--gcccggccC-----------------------------------------ATGCATAAGCCTTTTAAATGGAGATTTTGGTTCCCATTAGGGGAGTTTCGTGACTTGTCTAAGACCACATGCGTGATAAACAG--TATACATTTCT s panTro4.chr19 58952413 478 + 63644993 cTTTTTCTTTTCTGTTGTTATGACCCTTTATGCCTGTGACATCAATGGATCTGCATAAGCCTTTTTTCATTTTTTAAAAAtttttatttatttatttattttgagacagagtctggctc-tgtcgcccagcctggagtgcggtggcgtgatctcggctcactgcaacctccgcctcccgggttcaagccattctcctggctcagcctcctgagtagctgggattacaggcgcccaccaccacgcccagctaattttttgtatctttagtagagatggggtttcactgtgttaaccaggatggtctcgatctcctgacctc--atgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccactgc--gcccagccC-----------------------------------------ATGCATAAGCCTTTTAAATGGAGATTTTGGTTCCCATTAGGGGAGTTTCGTGACTTGTCTAAGACCACATGGGTGATAAACAG--TATACATTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55818673 479 + 60714840 cTTTTTCTTTTCTGTTTTTATAACCCTTTATGTCTGTGACATCAATGGATCTGCGTAAGCCTTTTTTCAtttttt-aaaatttttatttatttgtttattttgagacagagtctcgctc-tgttgcccaggctagggtgcagtggcacgatctcagctcactgcaacctccgcctcccgggttcaagccattctcctggctcagcctcctgagtagctgggattacaggtgcccgccaccacgcccagctaattttttgtatctttagtagagacggggtttcacagtgttaaccaggatggtctcgatttcctgacctt--gtgatccgcccgccttggcctcccaaagtgctgggattacaggcatgagccaccgc--gcccagccC-----------------------------------------GTGCATAAGCCTTTTAAATGGAGATTTTGGTTCCCATTAGGGGAGTTTCATGACTTGTCTAAGACCACACAGGTGATAAACAAATAGAACATTTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102583814 475 - 106955855 cTTTTTCTTTTCTGTTTTTATAACCCTTTATGTCTGTGACATCAATGGATCTCCGTAAGCCTTTTCTCAtttttt-taaatttttatttatgtatttattttgagacagagtctcactc-tgttgcccaggctggagtgcagtggcgtgatctcggctcactgcaacctccgcctcccgggttcacaccattctcctggctcagcctcctgagtagctgggattacaggcgcccgccaccacgcccagctaattttttgtatctttagtagagacagggtttcactgtgttaaccaggatggtctcaatctcctgacctc--gtgatccgcccgcctcggcctcccaaagtgtggggattacaggcgtgagccaccgc--gcccagccC-----------------------------------------GTGCATACGCCTTTTAAATGGAGATTTTGGTTCTCATTAGGGGAGTTTCGTGACTTGTCTAAGACCACACGGGTGATAAAC----TATACATTTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59876180 464 + 64156825 cTTTTTCTTTTCTGTTTTTATAGCCCTTTATGTGTGTGACATCAATGGATTGGCGTAAGACTTTTATttttttatt----tttatttttattttttta-tttgagacagaatctcgctc-tgttgcccaggctggagtgcagtgccgtgatctcggctcactgtaacctccgcctcccgggttcaagtcattttcctggctcggaat-ccaagcagctgggattacaggcgcccgccaccacgcccagctaattttttgtatctttagtagagatgaggtttcactgtgttagccagggtggtctcgatctcctgacctt--gtgatctgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgc--acccggccC----------------------------------------GGTGCATATGCCTTTTAAATAGAGATTTTGGTTCCCCTTTGGGGAG---------TTATCTAAGACCACACGGGTGATAAATAG--TAGACGTTTCT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47015027 469 + 51301725 ctttttcttttctgtttttatagccCTTTATGTGTGTGACATCAATGGATCGGcgtaagacttttatttttttatttttatttatttttatttattta-tttgagacagaatctcgctc-tgttgcccaggctggagtgcagtgccgtgatctcggctcactgtaacctccgcctcccgggtttaagtcaTTTTCCTGGCTCGGaatcccaagcagctgggattacaggcgcccgccaccacgcccagctaattttttgtatctttagtagagatgaggtttcactgtgttagccagggtggtctcgatctcctgacctt--gtgatctgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccactgc--acccagccc----------------------------------------cgtGCATATGCCTTTTAAATAGAGATTTTGGTTCCCCTTTGGGGAG---------TTGTCTAAGACCACACAGGTGATAAATAG--TAGACGTTTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46728109 469 + 50890351 cTTTTTCTTTTCTGTTTTTATAGCCCTTTATGTGTGTGACATCAATGGATCTGCGTAAGACTTTTAtttttttatttttatttttatttatttatcta-tttgagacagaatctcgctc-tgttgcccaggctggagtgcagtgccgtgatctcggctcactgtaacctccgcctcccgggttcaagtcattttcctggctcggaatcccaagtagctgggattacgggcgcccgccaccacgcccagctaattgtttgtatctttagtagagatgaggtttcactgtgttagccagggtggtctcgatctcctgacctt--gtgatctgcctgcctcggcctcccaaaatgctgggattacaggcgtgagccaccgc--acccggccC----------------------------------------TGTGCATATGCCTTTTAAATCGAGATTTTGGTTCCCCTTTGGGGAG---------TTGTCTAAGACCACACGGGTGATAAATAG--TAGACGTTTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45299671 463 + 49145316 cTTTTTCTTTTCTGTtttta-------------------------------------------ttatttatttat-----------tttatttatt---tttgagacggagtttcgctcttgttacccaggctggagtgcaatggcgcgatctcggctcaccgcaacctccgcctcctgggttcaggcgattctcctgcctcagcctcctgagtagctgggattacaggcacccgcctat---cccggctaatta-ctgtatttttagtagagacgaggcttcaccatgttggccaggctggtcttgaacacctgacctctggtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgtgcccggccTCTTTCCTGTTTTTAAACCCTTTATTTGTGACATCAATGGATCTGCATAAGCCTTTTAAATGGAGATTTTGGTTCCCGTTATGAGAGTTTTGTGACTCGTCTACGATCACATGGGTGATAAACAG--TGGACATTTCT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19464336 1974 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=191023.000000 s hg38.chr19_GL949747v2_alt 16062 83 + 729520 GTATGGGCTTAACCAGGAGGCACACACGACCA----GCCCATTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------GGGACTCCTAAGCGGGAGGACTCAC s panTro4.chr19 58952891 83 + 63644993 GTATGGGCTTAACCAGGAGGCACACACGACCA----GCCCATTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------GTAACTCCTAAGCGGTAGGACTCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55819152 87 + 60714840 GTACGGTCTTAACCAGGAGGCACACACGACCAATGGGCCGATTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------GGGACTCCTAAGCGGGAGGACTCAC i ponAbe2.chr19 C 0 M 2486 s nomLeu3.chr10 102584289 83 - 106955855 GTACGGGCTTAACCAGGAGGCACACACGACCA----GCCCATTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------AGGACTCCTAAGCGGGAGGACTCAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59876644 83 + 64156825 GTATGGGCTTAACCAGGAGGCAGACACGACCA----GCCCGTTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------GGGACTCCTAAGCGGGAGGACTCAC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47015496 83 + 51301725 GTATGGGCTTAACCAGGAGGCAGACACGACCA----GCCCGTTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------GGGATTCCTAAGCGGGAGGACTCAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46728578 83 + 50890351 GTATGGGCTTAACCAGGAGGCAGACACAACCA----GCCCGTTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------GGGACTCCTAAGCGGGAGGACTCAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45300134 142 + 49145316 GTGTGGGCTTAACCAGCAGACAGACACTACCA----GCCCAGCGTGGTAAGGGAGGGACTCATAGgtagagacaggtttcaccacgttcgtcaggctggtctcgaactcctgtcatggtgaAGGACTCCCAAGCTGGAGGACTCAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19466310 69 - 122678785 GTATGGGCTGAACTGGGAGGCAAACAAGGTCA----GCATATGGTGATAAGTGAC-----------------------------------------------------CTTGT--------G------------GGGAGAACTCAT i canFam3.chr1 I 1974 C 0 e macFas5.chr19 54882420 20327 + 59248254 M a score=153677.000000 s hg38.chr19_GL949747v2_alt 16145 81 + 729520 CGAGAGAGATACCC-TTTCCATATTGGATAAATCTGCCTCTGAGTGAGAAAG---GAAAAAAAAAAATCAGTTCTCAG-CTGCAGA s panTro4.chr19 58952974 81 + 63644993 CGAGAGAGATACCC-TTTCCATATTGGATAAATCTGCCTCTGAGTGAGAAAG---GAAAAAAAAAAATCAGTTCTCAG-CTGCAGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102584372 85 - 106955855 CGAGAGAGATACCCTTTTCCATATTGGATAAATCTGCCTCTGAGTGAGaaagaaaaaaaaaaaaaaaTCAGTTCTCAG-CTGCAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59876727 82 + 64156825 CGAGACAGATACCC-TTTCCATCCTGGATAAATCTGCCTCTGAGTGAGAGAG--AAAAAAAAGAAAATCAGTTTTCAG-CTGTAGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47015579 82 + 51301725 CGAGACAGATACCC-TTTCCATCCTGGATAAATCTGCCTctgagtgagagag--aaaaaaaagaaaatcagttttcaG-CTGTAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46728661 82 + 50890351 CGAGACAGATACCC-TTTCCATCCTGGATAAATCTGCCTCTGAGTGAGAGAG--AAAAAAAAGAAAATCAGTTTTCAG-CTGTAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45300276 81 + 49145316 CGAGACATATACCC-TTTCCATCTTGAATAAATCTGTATCTGAGTGAGAGAG---AGAGAAAAAAAATCAGGTCTCAG-CTGCAGA i calJac3.chr22 C 0 I 1135 s canFam3.chr1 19466379 76 - 122678785 -GAGACACGTATCC-TTTCCAGGTTGGATAAATCTGCATGTGAGTAAAAGGG--------GGAAAAATCAGCTCTCAGATTGCAGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M a score=175542.000000 s hg38.chr19_GL949747v2_alt 16226 92 + 729520 AGTCAGAACTT-AGTCTTTCTATCCGGTGATTCCCTTAAA----CTTCCCCTGTCCCTTACCGGCAGCCTCCTGCTCCGGAAGTTTGGAATGGCTGG s panTro4.chr19 58953055 92 + 63644993 AGTCAGAACTT-AGTCTTTCTATCCGGTGATTCCCTTAAA----CGTCCCCTGTCCCTTACCGGCAGCCTCCTGCTCCGGAAGTTTGGAATGGCTGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102584457 92 - 106955855 AGTCAGAACTT-AGTCTTTCTATCCGGTGATTCCCTTAAA----CTTCCCCGGTCCCTTACCGGCAGCCTCCTGCTCTGGAAGTTTGGAATGGCTGG i nomLeu3.chr10 C 0 M 550 s rheMac3.chr19 59876809 92 + 64156825 AGTCAGAACTT-AGTCTTTCTATCCGGTGATTCCCTTACA----TTTTCCCTGTCCCTTACCAGCAGCCACCTGCTCCGAAAGTTTGGAATGGCTGA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47015661 93 + 51301725 AGTCAGAACTTAAGTCTTTCTATACGGTGATTCCCTTACA----TTTTCCCTGTCCCTTACCAGCAGCCTCCTGCTCCGAAAGTTTGGAATGGCTga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46728743 92 + 50890351 AGTCAGAACTT-AGTCTTTCTATCTGGTGATTCCCTTACA----TTTTCCCTGTCCCTTACCAGCAGCCTCCTGCTCCGAAAGTTTGGAATGGCTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301492 86 + 49145316 agccAGAACTT-AGCCTTTCTGTCTGGTTATTCCCT----------TCCCCTATCCCTTACCAGCAGCCTCTCGTTCTGGAAGTTTGGAATGACTGG i calJac3.chr22 I 1135 C 0 s canFam3.chr1 19466455 95 - 122678785 AGTGAG-ACTT-ATTCTTTCTATCCCGTTGTTCCCCTGTGGTTTCTTCCCTTACCACTCACCTGCAGCCTCCTCCTTGGGAAATTTGGAATGTCTGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M a score=342465.000000 s hg38.chr19_GL949747v2_alt 16318 294 + 729520 TTCTGAAAGAGAGAGACACACGTG--AAAGGATGGGATGTGAAGATTTCGGGGAGAGGGTGAGGGCAATGGAGGGGAGAGGAAGG--------------------GAGAAGAAGGGAGAGGAGGAAGGTCACAGAATGGGCTGGGGTGGGGGCTCAGGGTGCCAATCCCGGATGTGCCAATGGGTTCCCTTGAGAATGACATGGGAA-TAAGTGGAGCATGAGCTATGCCAAG--CATCTACCTCTTGGTGGATTCCTCA---GATGATGAACCTACAAA------------------------------------------------AAATGCA-----------------------------------------------------GGAGGAATTTACCTACCGAG-AAAATCCTTCACTCC s panTro4.chr19 58953147 315 + 63644993 TTCTGAAAGAGAGAGACACACATG--AAAGGATGGGATGTGAAGATTTCGGggagagggtgagggcaatggaggggagaggaagggagaagaggggagaggaagagagaagaggggagaggaggAAGGTCACAGAATGGGCTGGGGTGGGGGCTCAGGGTGCCAATCCCGGATGTGCCAATGGGTTCCCTTGAGAATGACATGGGAACTACGTGGAGCATGAGCTATGCCAAG--CATCTACCTCTTGGTGGATTCTTCA---GATGATGAACCTACAAG------------------------------------------------AAATGCA-----------------------------------------------------GGAGGAATTTACCTACGGAG-AAAATCCTTCACTCC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59876901 285 + 64156825 TTCTGAGAGAGAGAGAGACACATG--AAAGGATGGGATGTGAAGATTTCGGggagagggtgagggcagtggaggggagaggaggg------------------------------aagtggagggAGGTCACAGAATGGGCTGGGGTGGGAGCTCAGGGTACCAATCCCGAATGTGCCAATGGGTTCCCTGGAGAATGACATGGGAATTAAGGGGAGCATGAGCTATGCCAAG--CATCTACCTTTTGGTGGATTCTTCA---GGTGACGAACCTACAAA------------------------------------------------AAATGCA-----------------------------------------------------GGAGGAATTTACCTACCGAG-AAAATCCTTCACTCC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47015754 287 + 51301725 ttctgagagagagagagacacgtGAAAAAGGATGGGATATGAAGATTTCggggagagggtgagggcaatggaggggagaggaggg------------------------------gagtggagggaggtcacagaatgggctggggtgggggctcagggTACCAATCCCAAATGTGCCAATGGGTTCCCTGGAGAATGACATGGGAATTAAGGGGAGCATGAGCTATGCCAAG--CATCTACCTTTTGGTGGATTCTTCA---GGCGACGAACCTACAAA------------------------------------------------AAATGCA-----------------------------------------------------GGAGGAATTTACCTACCGAG-AAAATCCttcactct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46728835 285 + 50890351 TTCTGAGAGAGAGAGAGACACGTG--AAAGGATGGGATATGAAGATTTCGGggagagggtgagggcaatggaggggagaggaggg------------------------------gagtggagggaggTCACAGAATGGGCTGGGGTCGGGGCTCAGAGTACCAATCCCAAATGTGCCAATGGGTTCCCTGGAGAATGACATGGGAATTAAGGGGAGCATGAGCTATGCCAAG--CATCTACCTTTTGGTGGATTCTTCA---GGCGAAGAACCTACAAA------------------------------------------------AAATGCA-----------------------------------------------------GGAGGAATTTACCTACCGAG-AAAATCCTTCACTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301578 269 + 49145316 TTCT--AAGAGAGAGAAACACATG--AAAGGACGGGATGTGAAGACTGGGGGGAGAGGGTGAGGGCTATGGAGGGGAGAGGAGGT--------------------------------------------CACAGGCCGGGCAGGAGTAGGGGCTTAGGGCACCAGTCCTGGATGTGCCAGTGGATTCCCTGGAGAATGACATGGGAATTGGGTGGAGCATACGCTATGCCCAG--CGTGTACCTCTTGGAGGATTCTTCA---GGCGAGGAACCTATAAA------------------------------------------------AAATGCA-----------------------------------------------------GGAGGAATGTACCTACTGAG-AAAACGCTTCGCCCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19466550 329 - 122678785 TTCT--AAGAGACAGAAACACATT--AAAGCATGGGATCTAAAGACT--GGGGAGGATGGCAGGGCTTTGGAGACTAGAGGCATG------------------------------GG----------------------------------------------AATCATAGATGTGCAATCAGGGTCTCTGAGGAAGG-------------GAGAGGCACGAGATACATCAAGTATATCTACCTTTTGGTGGCTTCTTCATGTGATGATGAACCTACAAAACAAAACAAAAAGGGAGGAATTTATATTtaaaaaattttttttaatttaaattcaatttcctgacataaagtataatacccagtgctcatctcatcatgtgccctcAGGGAGAAATTTATCTAATAAGAAAAATCTTTCATTTC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55819239 2486 + 60714840 M e nomLeu3.chr10 102584549 550 - 106955855 M e macFas5.chr19 54882420 20327 + 59248254 M a score=36324.000000 s hg38.chr19_GL949747v2_alt 16612 17 + 729520 CCCTCTCTCCCTTTGCG s panTro4.chr19 58953462 17 + 63644993 CCCTCTCTCCCTTTGCG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585099 17 - 106955855 CCCTCTCTCCCTTTGCG i nomLeu3.chr10 M 550 C 0 s rheMac3.chr19 59877186 17 + 64156825 CCCTCCCTCCCTTTGCG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47016041 17 + 51301725 ccctctctccctttgcG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46729120 17 + 50890351 CCCTCTCTCCCTTTGCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301847 17 + 49145316 CCCTCTCTCCCTTTGTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19466879 17 - 122678785 ATCCCCCTTCCCCAGCG i canFam3.chr1 C 0 I 181 e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M a score=754002.000000 s hg38.chr19_GL949747v2_alt 16629 367 + 729520 TTCTCTGAGCTCACTGTGCTGGCTGCATCTGTAGATgatgaagactgagaggaagaggagaaggatggagatgcagctgaagatggcgacaaagatggTTCTGGTGTCTGGAGGGGGAAGAGCAGGTCAGGGAATCAGCCTGGCTCCTGAAATCCACTGATAGGGGCGAGCCGAAAA--GCTAAGAGAAGCCagacagatggcctggcttccaagcc--tggatctcccacctcggagctggaacttcctattgctttggggaatttccttaatcttctccaagcttctgtttccccatctgtaaagtgaggatagcagcagtagctactttattggatgg-------------tgggtcagtacctatagaaagggctggaac s panTro4.chr19 58953479 367 + 63644993 TTCTCTGAGCTCACCGTGCTGGCTGCATCTGTAGATGATGAAGACTGAGAGGAAGAGGAGAAGGATGGAGATGCAGCTGAAGATGGCGACAAAGATGGTTCTGGTGTCTGGAGGGGGAAGAGCATGTCAGGGAATCAGCCTGGCTCCTGAAATCCACTGATAGGGGCGAGCCGAAAA--GCTAAGAGAAGCCagacagatggcctggcttccaagcc--tggatctcccaccttggagctggaacttcctattgctttggggaatttccttaatcttctccaagcttctgtttccccatctgtaaagtgaggatagcagcagtagctactttattggatgg-------------tgggtcagtacctatagaaagggctggaac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585116 367 - 106955855 TTCTCTGAGCTCACCGTGCTGGCTGCATCTGTAGATGATGAAGACTGAGAGGAAGAGGAGAAGGATGGAGATGCAGCTGAAGATGGCGACAAAAATGGTTCTGGTGTCTGGAGAGGGAAGAGCAGGTCAGAGAATCAGCCTGGCTCCTGAAATCCACCGATGGgggtgagctgaaaa--gctaagaggagccagacagacggcctggcttccaagcc--tggatctcccacctcggagctggaatttcctattgctttggggaatttccttaatcttctccaagcttctgtttccccatctgtaaagtgaggatagcagcagtagctactttattggatgg-------------tgggtcagtacctatagaaagggctggaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59877203 367 + 64156825 TTCTCTGAGCTCACCGTGCTGGCTGCATCTGTAGATGATGAAGACTGAGAGGAAGAGAAGAAGGATGGAGATGCAGCTGAAGATGGCGACAAAGATGGTTCTGGTGTCTGGAGGGGGAAGAGCAGGTCAGGGAATCAGCCTGGCTCCTGAAATCCACCGATAGGGGTGagcagaaaa--gctaagaggagccagacagacggcccggcttccaagcc--tggatctcccaccttggagctgaaacttcctattgctttggggaatttccttaatcttctccaagcttctgtttccccatctgtaaagtgagtgtagcagcagtacctattttgttggctgg-------------tgggtcagtacctatagagagggctggaac i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47016058 366 + 51301725 TTCTCTGAGCTCACCGTGCTGGCTGCATCTGTAGATGATGAAGactgagaggaagagaagaaggatggAGATGCAGCTGAAGATGGCGACAAAGATGGTTCTGGTGTCTGGAGGGGGAAGAGTAGGTCAGGGAATCAGCCTGGCTCCTGAAATCCACCGATAGGGGTGAGCAGAAAA--GCTAAGAGGAGCCAGACAGACGGCCCGGCTTCCAAGCC--TGGATCTCCCACCTT-GAGCTGAAACTTCCTATTGCTTTGGGGAATTTCCTTAATCTTCTCCAAgcttctgtttccccatctgtaaagtgaggacaGCAGCAGTACCTATTTTGTTGGCTGG-------------TGGGTCAGTACCTATAGAGAGGGCTGGAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46729137 367 + 50890351 TTCTCTGAGCTCACCGTGCTGGCTGCATCTGTAgatgatgaagactgagaggaagagaagaaggatggagatgcagctgaagatgGCAACAAAGATGGTTCTGGTGTCTGGAGGGGGAAGAGCAGGTCAGGAAATCAGCCTGGCTCCTGAAATCCACCGATAGgggtaagtagaaaa--gctaagaggagccagacagacggcctggcttccaagcc--tggatctcccacctcggagctgaaacttcctattgctttggggaatttccttaatcttctctaagcttctgtttccccatcggtaaagtgaggacagcagcagtacctattttgttggctgg-------------tgggtcagtacctatagagagggctggaac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301864 365 + 49145316 CTCTCTGAGCTCACCGTTCTGGCTGCATCTGTAGATGACGATGACTAAGAGGAAGAGGAGAAGGATGGAGACACAGCTGAAGATGCTGACAAAGATGGCTCTGGTGTCTAGAGA-GGAAGAGCAGGTCAGGGAATCAGCCTGGCTCCTGAAATGCGCTGA-GAGGGTGagcagaaaa--gctaagaggagccagccagacagcctggcttccaagcc--tggatctcccacctcggatctggaacttcctattgctttggggaattaccttaatcttctccaagcttctgtttcctcgtctgtaaagtgagggtagcagcagtagctactgtagtggatgg-------------tgggtcagtacccatagagaaggctggaac i calJac3.chr22 C 0 T 1028 s canFam3.chr1 19467077 365 - 122678785 TTCCCCAAACTCACCATGCTGGGTGCATATGTTGATGAAGAAGATGGAGAGGAAGAGGAGCAAAATGGAAAGGCAGGTGAACGTAGCAGCAAAGATGAATCTGGTGGCTAGTGGGAGAGGAACAGGTAGTAGAATCAGTTTGGTTCCTGAGACACCCTGATCAAGCTTAGCAGACAGGTGCCAAg-------aaccagataacctggtttccaaaactttgcagctgccacttctgagctgtaacttccaattactgc-gggaatttccttca-cctccctgaccttttgtttccctgtt--caaagtgaggacaaaaacagtagctgcTGGACTGGATGGAGCTGGGGTTAACTGGGTGGGTCCTGGCAGAGAGG-------- i canFam3.chr1 I 181 C 0 e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M a score=108538.000000 s hg38.chr19_GL949747v2_alt 16996 84 + 729520 agtgcttggcgcataggaaattccaaaaatTCCCAGGGAATGTTTGGTGCATAGCAATGAtattgatcatttattgtgagccag s panTro4.chr19 58953846 84 + 63644993 agtgcttggcgcataggaaattccaaaaatTCCCAGGGAATGTTTGGTGCATAGCAATGAtattgatcatttattgtgagccag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585483 84 - 106955855 agtgcttggcgcataggaaattccaaaaatTCCCAGGGAATGTTTGGTGCATAGCAATGATATTGATCATTTATTGTGAGCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59877570 75 + 64156825 actgcttggcgcatagg---------aaattcccagggaatgttTGGTGCATAGCAATGAAATTGATCATTTATTGTGAGCCAG i rheMac3.chr19 C 0 I 1256 s papAnu2.chr19 47016424 74 + 51301725 ACTGCTTGGCGCATAGG---------AAATTCCCAGGGAATGTTTGGTGCATAGCAATGAAATTGATCATTTATTGTGAGCCA- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46729504 75 + 50890351 actgcttggcacatagg---------aaattcccagggaatgttTGGTGCATAGCAATGAAATTGATCATTTATTGTGAGCCAG i chlSab2.chr6 C 0 I 323 s canFam3.chr1 19467442 71 - 122678785 ---GCCTCACACAAGGG---------AAATCCCCAATAAGTGTTTTAGCCATAGTAATAATTCCTATTATttattgtgagctg- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45302229 1028 + 49145316 T e macFas5.chr19 54882420 20327 + 59248254 M a score=7377.000000 s hg38.chr19_GL949747v2_alt 17080 26 + 729520 ctctgttccaggtgctccatatatat s panTro4.chr19 58953930 26 + 63644993 ctctgttccaggtgctccatatatat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585567 21 - 106955855 CTCTGTTCCAGTTGCTCCata----- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47016498 10 + 51301725 -----------GTGCTttaca----- i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19467513 26 - 122678785 ccctgtgctaggcgcttcacacatgt i canFam3.chr1 C 0 I 817 e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45302229 1028 + 49145316 T e chlSab2.chr6 46729579 323 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59877645 1256 + 64156825 I a score=83016.000000 s hg38.chr19_GL949747v2_alt 17106 238 + 729520 ATATACGTGTGTGTGTGTGtatatatatatataaatgtatatatatgtgtgtgtatatataaatgtgtatatatatatatatatatatatatatatatacatatatatatatatataCACACttttttt-tttttgagatggagtcgtgttctgtcacccaggctggagtgtgatcctggctcactgcaacctccacctccctggttcaaacaattctcctgactcagcctcctgagta s panTro4.chr19 58953956 221 + 63644993 ata----tgtatgtgtgtatatatatatatataaatgtatatatatgtgcgaatatatataaatgtgtgtatatgtacatatatat--------------atatatatatatataCACACACtttttttctttttgagatggagtcgtgctctgtcacccaggctggagtgtgatcctggctcactgcaacctccacctccctggttcaaacaattctcctgactcagcctcccgagta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585588 226 - 106955855 -------tatatgtgtgtatatatatatacacatatataaataaatgtatgtatatatataaatgtatatatatatgtgcgtatatatataaat------gtgtgtatatatatataCACtttttttttttttttgagatggagctgtgctctgtcacccaggctggagtgtgatcctggctcactgcaacctccacctccttggttcaaacaattctcctgactcagcctcccgagta i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47016508 184 + 51301725 -------tacgtgtgtatgtgtgtatat----------------------------------gtgtgtgtgtgtgtgtgtgtgtat--------------atatatatatatatatatatattttttttttttttgagacggagcctcgctctgtcacccaggctggagtgtgatcttggctcactgcaacctccacctctctggttcaaccaattctccccactcagcctcctgagta i papAnu2.chr19 C 0 I 135 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45302229 1028 + 49145316 T e chlSab2.chr6 46729579 323 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59877645 1256 + 64156825 I a score=780.000000 s hg38.chr19_GL949747v2_alt 17344 2 + 729520 gt s panTro4.chr19 58954177 2 + 63644993 gt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585814 2 - 106955855 gt i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47016827 2 + 51301725 gc i papAnu2.chr19 I 135 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45302229 1028 + 49145316 T e chlSab2.chr6 46729579 323 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59877645 1256 + 64156825 I a score=459091.000000 s hg38.chr19_GL949747v2_alt 17346 408 + 729520 tgggattacaggcgtgagccaccacatctgtctGTGTAATCACTGTCTGAAATCCACTGAT-GGGGTGAGTAGAAAAGCTAAGAGAAGCCAGACAGATGGCCTGGCTTCCAAGCCTGGAT-CTCCCACCTTGGAGCTGGAACTTCCTTGGAGCTGGacatttcgaccaatagactttgagtaaagcagatgacccactgtcataggggtgggcctcatccaatcagttgaagactttaagactttaagagaaaagactgaggtcccccaaggtggaaggaattctgcctccagactcaagctgcaatatcaagtctcccctggatcccctgcctgcctgccctgcagatttcagacttgccagctccccacaatcacgtgaaccaatccattaaaatcaatctctctctc s panTro4.chr19 58954179 409 + 63644993 tgggattacaggcatgagccaccacatctgtctGTGTAATCACTGTCTGAAATCCAATGATAGGGGTGAGCAGAAAAGCTAAGAGAAGCCAGACAGATGGCCTGGCTTCCAAGCCTGGAT-CTCCCACCTTGGAGCTGGAACTTCCTCAGAGCTGGacatttcgaccaatagactttgagtaaagcagatgacccactgtcacaggggtgggcctcatccaatcagttgaagactttaagactttaagagaaaagactgaggtcccccaaggtggaaggaattctgcctccagactcaagctgcaatatcaagtctcccctggatcccctgcctgcctgccctgcagatttcagacttgccagctccccacaatcacgtgaaccaatccattaaaatcaatctctctctc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585816 403 - 106955855 tgggattacaggcgtgagccaccacgtctgtctGTGTAATCAGTGTCTGAAATCCACTGATAGGGGTGAGCAGAAAAGCTTAGAGAAGCCAGACAGATGGCCTGGCTTCCAAGTCTGGAT-CTCCTGCCTCGGAA-TGGAACTTCCTTGGAGCTGGacgtttggaccaatagactttgagtaaagcagatgacctactgtcatacgggtgggcctcatcctatcagttgaaggctttaagactttaagagaaaagactgaggtcccccaaggtggaaggaattctgcctccagactcaagctgcaatatcaagtctcccctggatctcctgcccgcctgccctgcagatttcagacttgccagccccccacaatcacgtgaaccaatccctta-----aatctctctctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59878901 380 + 64156825 tgggattacaggtgtgagccaccacgtctgtccGTGTAATCACTGTTTGAAATGCACTGATAGGGGTGAGCAGAACTGCTAAGAGGAGCCAGACAGACAGCCTGGCTTCCAAGCCTGGAT-CTCCCGCCTTGGAG-----------------CTGGacatttcaaccaatagactttgagtaaagcagatgacacactgtcatatgggtgggcctcatccaatcagttgaaggctt--------taagagaaaagactgaggtaccccaaggtggaaggaattcggcctccagactgaggctgcaatatcaagtctcccctggatctcct----gcctgccttgcaggtttcagacttaccagcccccgacaatcacatgaaccaatccattaaaataaatatctctctc i rheMac3.chr19 I 1256 I 436 s papAnu2.chr19 47016829 374 + 51301725 tgggattacaggtgtgagccaccacgtctgtcCGTGTAATCACTGTCTGAAATGCACTGATAGGGGTGAGCAGAAATGCTAAGAGGAGC----CAGACAGCTTGGCTTCCAAGCCTGGAT-CTCCCACCTGGGAG-----------------CTGGACATTTCAACCaatagactttgagtaaagcagatgacccACTGTCatatgggtgggcctcatccaatcagttgaaggctt----------aGAGAAAAGACTGAGGTACCCCAAGGTGGAAGGAATTGGGCCTCCAGACTCAAGCTGCAGTATCAAGTCTCCCTTGGATCTCCT----GCCTGCCCTGCAGATTTCAGACTTACCAGCCCCCGACAATCACATGAACCAATccattaaaataaatctctctctc i papAnu2.chr19 C 0 I 66 s chlSab2.chr6 46729902 377 + 50890351 tgggattacaggtgtgagccaccacgtctgTCTGTGTAATCACTGTCTGAAATGCACTGATAGGGGTGAGCAGAAATGCTAAGAGGAGC----CAGACAGCCTGGCTTCCAAGCCTGGATCCTCCCGCCTTGGAG-----------------CTGGacatttcaaccaatagactttgagtaaagcagatgacccactgtcatatgggtgggcctcatccaatcagttgaaggctt--------taagagaaaagactgaggtaccccaaggtggaaggaattgggcctccagactcaagctgcaatatcaagtctcccttggatctcct----acctgccctgcagatttcagacttaccagcccctgacaatcacatgaaccaatccattaaaataaatctctctcta i chlSab2.chr6 I 323 I 4 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45302229 1028 + 49145316 T e macFas5.chr19 54882420 20327 + 59248254 M a score=12058.000000 s hg38.chr19_GL949747v2_alt 17754 28 + 729520 catatatgtatatacatgtatat----gttc-----t s panTro4.chr19 58954588 33 + 63644993 catataTGTATATACATGTATAT----Gttctttttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586219 27 - 106955855 catatatgtatctacatgtgtat----gttc------ i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017269 37 + 51301725 tatacacacacacacatgtgtatgtgggtttttttgt i papAnu2.chr19 I 66 C 0 s chlSab2.chr6 46730283 37 + 50890351 tatacacacacacacacgtgtatgtgggtttttttgt i chlSab2.chr6 I 4 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45302229 1028 + 49145316 T e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=113125.000000 s hg38.chr19_GL949747v2_alt 17782 97 + 729520 cttttttttttttgagacaaagtctcactcttatcgtccaggctggagtgcaatagt-gcaatcttggctcactgcaagctccgcctcccgggttcaa s panTro4.chr19 58954621 97 + 63644993 tttttttttttttgagacaaagtctcactcttgtcgtccaggctggagtgcgatagt-gcaatctcggctcactgcaagctccgcctcccgggttcaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586246 97 - 106955855 tttttttttttttgagacaaagtctcactcttgtcatccaggctggagtgcaatagt-gcaatcttggctcactgcaagctccgcctcccgggttcaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017306 97 + 51301725 ttgtttgttttttgagacaaagtttcactcttgtcgtccaggctggagtgcaatagc-gcaatcttggctcgctgcaagctctgcctcctgggttcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46730320 98 + 50890351 ttgtttgttttttgagacaaagtttcactcttgtcatccaggctggagtgcaatagctgcaatcttggctcgctgcaagctccgcctcctgggttcaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301201 97 + 49145316 Ctttctttcttttgagatggagtttcactcttgctgcccaggctggagtgcaatggc-gcgatcccagctcactgcagcctctgcctcctgcgttcaa i calJac3.chr22 T 1028 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=105959.000000 s hg38.chr19_GL949747v2_alt 17879 135 + 729520 gcaattctcctgccttagcctcctgagtagctgggattacaggtgcccaccatcacgcccggctaatttttgtatttttagtagagacggggtttcgccatgttggccacgctggtcttgaactactgacctcag s nomLeu3.chr10 102586343 135 - 106955855 ggaattctcctgcctcagcttcctgagtaactgggattacaggcacccaccaccacgcccggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctggtcttgaactactgacctcag i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017403 135 + 51301725 gcaattctcctgcctcagcctcctgagtagctgggattacaggtgcccaccaccacgcccgactgatttttgtatttttagtagagacggggtttcaccatgttgaccaggctggtcttgaactcctgacctcag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46730418 135 + 50890351 gcaattctcctgcctcagcctcctgagtagctgagattacaggtgcccaccaccacgcccgactgatttttgtatttttcgtagagacggggtttcgccatgttgaccaggctggtgttgaactcctgacctcag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301298 134 + 49145316 gtgattctcctgcctcagcctcccgagtagctgggatcacaagcacgcgccaccgtgcccagctaa-ttttgtattttcagtagagatggggtttctccatgttggccaggctggtcttgaactcccaaccccac i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I e panTro4.chr19 58954718 0 + 63644993 C a score=94146.000000 s hg38.chr19_GL949747v2_alt 18014 96 + 729520 gcaatctgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacacccagcttatatctatatgttctat-tggttctg-tttttc s panTro4.chr19 58954718 96 + 63644993 gcaatccgcctgccttggcctcccaaagtgctgggattacaggcatgagccaccacacccggcttatatctatatgttctat-tggttctg-tttttc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586478 92 - 106955855 gcaatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacacccagcttatatctatatgttcta-----ttctg-tttttc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017538 97 + 51301725 gtaatccacccacatcggcctcccaaagtgctaggattacaggcgtgagccaccacacccagtttatatatatatgttctat-tggttctgttttttc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46730553 97 + 50890351 gtaatccacccacgtcggcctcccaaagtgctaggattacaggtgtgaaccaccacacccagcttatatatatatgttctat-tggttctgttttttc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301432 97 + 49145316 gtgatccacccacctcagccccccaaagtgctggagttacagacgtgagccactgtacccagccAGAACTTAGCCTTTCTGTCTGGTTATT-CCCTTC i calJac3.chr22 C 0 I 53 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=42161.000000 s hg38.chr19_GL949747v2_alt 18110 55 + 729520 tggaaaaccctggctaacacaGACATGATCTCAGCTCTTAACTTCAAACATATTT s panTro4.chr19 58954814 55 + 63644993 tggaaaaccctggctaacacagacttgatCTCAGCTCTTAACTTCAAACATATTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586570 55 - 106955855 tggaaaaccctggctaacacaCACATGATCTCAGCTCTTGACTTCAAACGTGTTT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017635 50 + 51301725 tGGAAAACCCTGGCTAATAcagacacgatctcagctct-----tcaaacacattt i papAnu2.chr19 C 0 I 6 s chlSab2.chr6 46730650 55 + 50890351 tggaaaactctGGCTAACACAGACATGATCTCAGCTCTTAACCTCAAACACAttt i chlSab2.chr6 C 0 I 28 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301529 53 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=7367.000000 s hg38.chr19_GL949747v2_alt 18165 17 + 729520 CCTTTTTCTTTTTTTAA s panTro4.chr19 58954869 17 + 63644993 CCTTTTTCTTTTTTTAA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586625 15 - 106955855 --TTTTTCTTTTTTTAA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017691 17 + 51301725 cttttttttttttttta i papAnu2.chr19 I 6 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301529 53 + 49145316 I e chlSab2.chr6 46730705 28 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=6371.000000 s hg38.chr19_GL949747v2_alt 18182 11 + 729520 AG---GAGAGAGAG s panTro4.chr19 58954886 11 + 63644993 AG---GAGAGAGAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586640 14 - 106955855 agagagagagagag i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017708 11 + 51301725 aa---gagacagag i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45301582 11 + 49145316 AA---GAGAGAGAA i calJac3.chr22 I 53 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e chlSab2.chr6 46730705 28 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=50408.000000 s hg38.chr19_GL949747v2_alt 18193 125 + 729520 AGATGTGAAAGGACGGGATGTGAAGATTATGGGGAGAGGGTGAGGGCAATggaggggagaggaggggaga----------ggagggAGGTCACA-----------GATGGGAGCTCAGGATGCCAATCCCAGATGTGCCAATgggt s panTro4.chr19 58954897 135 + 63644993 AGACGTGAAAGGATGGGATGTGAAGACTATGGggagagggtgagggcaatggaggggagaggaggggagaagaggggagaggagggAGGTCACA-----------GATGGGAGCTCAGGATGCCAATCCCAGATGTGCCAATgggt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586654 136 - 106955855 agagGTGAAAGGATGGGATGTGAAGATTCTGGggagagggtgagggcaatggaggggagaagaggggaga----------ggagggaggtcacagaatgggctgggatgggagCTCAGGGTGCCAATCCCAGATGTGCCAATgggt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45301593 122 + 49145316 ACACATGAAAGGACGGGATGTGAAGACTGGGGGGAGAGGGTGAGGGCTATGGAGGGGAGAGGAGGTCACA-------------GGCCGGGCAGG-----------AGTAGGGGCTTAGGGCACCAGTCCTGGATGTGCCAGTGGAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e chlSab2.chr6 46730705 28 + 50890351 I e papAnu2.chr19 47017719 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=3386.000000 s hg38.chr19_GL949747v2_alt 18318 4 + 729520 tccc s panTro4.chr19 58955032 4 + 63644993 tccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586790 4 - 106955855 tccc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017719 4 + 51301725 tctc i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45301715 4 + 49145316 TCCC i calJac3.chr22 C 0 I 2530 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e chlSab2.chr6 46730705 28 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=613.000000 s hg38.chr19_GL949747v2_alt 18322 2 + 729520 at s panTro4.chr19 58955036 2 + 63644993 ac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586794 2 - 106955855 at i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017723 2 + 51301725 ac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301719 2530 + 49145316 I e chlSab2.chr6 46730705 28 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=301761.000000 s hg38.chr19_GL949747v2_alt 18324 234 + 729520 tgttgcccaggctagagtgcagtggtgtgatcatactcgaattcctgggctcaagtggtcctcctcactcggcctcca-gggtagctgggagtacagaccaccacgcccagccaacttCAAACACACTTCAATGAGCTCGTTGATGCCAGGTAATGAACAGCAGTGACACGGGCATGGAAGGCGTTTAGAGTGGGGAGGGGTGGGGCTCTCTGAAGGAGACATGATTCCCCAAGA s panTro4.chr19 58955038 234 + 63644993 tgttgcccaggctagagtgcagtggtgtgatcatactcgaattcctgggctcaagtggtcctcctcactcggcctcca-gggtagctgggagtacagaccaccacgcccagcCAACTTCAAACACACTTCAATGAGCTCATTGATGCCAGGTAATGAACAGCAGTGACACGGGCATGGAAGGCGTTTAGAGTGGGGAGGGGTAGGGCTCTCTGAAGGAGACATGATTCCCCAAGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586796 234 - 106955855 tgttgcccaggctggagtgcagtggtgcgatcatactcgaattcctgagctcgagtggtcctcctcactcggcctcca-gggtagctgggagtacagaccaccacgcccagcCAACTTCAAACACACTTCAAAGAGCTCGTTGATGCCAGGTAATGAACAGCAGTGACAAGGGCATGGAAGGCGTTTAGAGTGGGGAGGGGTGGGGCTCTCTGAAGGAGACATGATTCCCCAAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59879717 234 + 64156825 tgttgcccaggctggagtgcagtggtgcaatcatactcgaattcctgggctcaagtggtcctcctcactcggcctcca-gggtagctgggagtacagatcactgcgcccagcCAACTTCAAACACACTCCAATGAGCTCGTTGACGCCAGGTAACGAACAGCAGTGACATGGGCATGGAAGGCGTTTAGAGTGGGGAGGGGTGGGGCTCTCTGAAGGAGATATGATTCTCCGAGA i rheMac3.chr19 I 436 C 0 s papAnu2.chr19 47017725 223 + 51301725 tcttgcccaggctggagtgcagtggtgcaatcatactcgaattcctgggctcaagcggtcctcctcaCTCGGCCTCCAggggtagctgggagtacagatcaccacgcccagccaacttcAAACACACTCCAATGAGCTCGTTGACACCAGGTAACGAACAGCAGTGACATGGGCATGGAAGGCGTTTagagtggggaggggtggggttcTCTGAAGGAGACAC------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46730733 234 + 50890351 tgttgcccaggctggagtgcagtggtgcaatcatactcgaattcctggcctcaagcggtcctcctcactcggcctcca-gggtagctgggagtacagatcaccacgcccagcCAACTTCAAACACACTCCAATGAGCTCGTTGACGCCAGGTAACGAACAGCAGTGATGTGGGCATGGAAGGCGTTTAGAGTGGGGAAGGGTGGGGCTCTCTGAAGGAGACATGATTCTCCGAGA i chlSab2.chr6 I 28 I 41 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301719 2530 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=1746.000000 s hg38.chr19_GL949747v2_alt 18558 3 + 729520 CAC s panTro4.chr19 58955272 3 + 63644993 CAC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102587030 3 - 106955855 CAC i nomLeu3.chr10 C 0 I 4 s rheMac3.chr19 59879951 3 + 64156825 CAC i rheMac3.chr19 C 0 I 119 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301719 2530 + 49145316 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017948 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M a score=5373.000000 s hg38.chr19_GL949747v2_alt 18561 13 + 729520 AGAACAAGGGATC s panTro4.chr19 58955275 13 + 63644993 AGAACAAGGGTTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102587037 13 - 106955855 ACGACAAGGGATC i nomLeu3.chr10 I 4 C 0 s papAnu2.chr19 47017948 13 + 51301725 AGAACGAGGGATC i papAnu2.chr19 C 0 I 22 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301719 2530 + 49145316 I e chlSab2.chr6 46730967 41 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=15005.000000 s hg38.chr19_GL949747v2_alt 18574 55 + 729520 AGCTGGGAGAATTCAGGGAGGATTCCTAATAAGAACAGGGTTAGAGCAGGGTAGA s panTro4.chr19 58955288 55 + 63644993 AGCTGGGAGAATTCAGGGAGGATTCCTAATAAGAACAGGGTTAGACCAGGGTAGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102587050 55 - 106955855 AGCTGGGAGAATTCAGGGAGGATTCCTAATAAGAACAGAGTTAGACCAGGGTAGA i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301719 2530 + 49145316 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=7272.000000 s hg38.chr19_GL949747v2_alt 18629 14 + 729520 AAAGAATGACCAGT s panTro4.chr19 58955343 14 + 63644993 AAAGAATGACCAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55821738 14 + 60714840 AAAGAATGTCCAGT i ponAbe2.chr19 M 2486 C 0 s nomLeu3.chr10 102587105 14 - 106955855 AAAGAATGACCAGT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e calJac3.chr22 45301719 2530 + 49145316 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=639731.000000 s hg38.chr19_GL949747v2_alt 18643 895 + 729520 ggccgggcac-ggtggctcacgcctgtaatcctggcactttgggagagtgaagtaggtggatcacttgaggtctggagttcgagaccagcctggccaacatggtgaaaccctgtctctactgaaaatataaaaaataagctgggcatggtggcgcacgcctgtagtcccagctactcaggaggctgagagaagagaattgcttgaacctgggaggcggaggttgcagtgagccgagatcgcatcactgcatcatacactcaactgaccaagactccaactcaaaaaaGCATCCCTCTCAGGAGATAAAATTTCTACCAATTaaaaaacaaaaac-------------------aaaacaaaacaaaaaaaacTAGTTCTTGAGCAATATTGCCATGCAAGTCtacatcatagcgttttaaagtcttaacaacaaccctgcaaggtagtacaattatttccctcccactggtgaagGGCATGCATTCCCGTGTGACTCCTGGGATTACAGCAAGGGTTGTGTCCAAAGCTCACAGCGTTGAGGAAGAGAGAGCAACCTGTTACTAAAGCTAGGCGACAGAGTCCATGCAGTTCCCCCCCGTTT--------------TTTGTTTTTCTTGGCACTTTAGATTCAAGAAACACAAGTCGTGAGACTTTAAGGAGTAAGTAGCAGAAACGTGATTAAGGA-AAAAAGTTGAGCAACTATAGAAGTGAGGCCCCAGAAAGGGGCTTCACCAAGACCCCCGCTATCTTTGTTAGTGTGCTTTGAGTCTGAGAATTTTTCCTAGGTGTGCAATGATCTGTGGTCACATTACAGAGCCAAGTCTGAGATGCTTCACACGCCTGGTCCTCTGCACCAACAGAGGGTCTCCCATCCAGACGCTTCCCCTACTTGGTTC----GCTATGTT-----TGCATTGGCATTt s panTro4.chr19 58955357 893 + 63644993 ggccgggcgt-ggtggctcacgcctgtaatcctggcactttgggagagtgaagtaggtggatcacttgaggtctggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatataaaaaataagctgggcatggtggcgcatgcctgtagtcccagctactcaggaggctgagagaagagaattgcttgaacctgggagggggaggttgcagtgagccgagatcgcatcactgcatcatacactcgactgaccaagactccaactcaaaaaaGCATCCCTCTCAGGAGATAAAATTTCTACCAATTAAaaaacaaaaac-------------------aaaacaaaacaaaacaaaCTAGTTCTTGAGCAATATTGCCATGCAAGTCtacatcatagcgttttaaagtctta-caacaaccctgcaaggtagtacaattatttccctcccactggtgaagGGCATGCATTCCCGTGTGACTCCTGGGATTACAACAAGGGTTGTGTCCAAAGCTCACAGCGTTGAGGAAGAGAGAGCAACCTGTTACTAAAGCTAGGCGACAGAGTCCATGCAGTTCCCCCC-GTTT--------------TTTGTTATTCTTGGCACTTTAGATTCAAGAAACACAAGTCGTGAGACTTTAAGGAGTAAGCAGCAGAAACGTGATTAAGGA-AAAAAGTTGAGCAACTATAGAAGTGAGGCCCCAGAGAGGGGCTTCACCAAGACCCCCGCTATCTTTGTTAGTGTGCTTTGAGTCTGAGAATTTTTCCTAGGTGTGCAATGATCTGTGGTCACATTACAGAGCCAAGTCTGAGATGCTTTACACACCTGGTCCTCTGCACCAACAGAGGGTCTCCCATCCAGACGCTTCCCCTACTTGGTTC----GCTATGTT-----TGCGTTGGCATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55821752 913 + 60714840 ggccgggcgcgggtggctcacgcctgtaatcctggcactttgggagagtgaagtaggtggatcacttgaggtctggagttcaagagcagcctggccaacatggtaaaaccctgtctctactaaaaatataaaaaataagctgggcatggtggtgcacgcctgtagtcccagctactcaggaggctgagagaagagaattgcttgaacctgggaggcggaggttgcagtgagccgagatcgcatcattgcatcatacactcgacagactgagactccaactcaaaaaaGCATCCCTCTCAGGAGATAAAATTTCTACCAATTAaaagacaaaaacaaaaaattaaacaaa----aaaacaaaacaaaa-aAactagttcttgagcaatactgccaggcaagtctacatcacagcattttaaattctta-caacaaccctgcaaggtagtacaattatttccctcccactggtgaagaGCATGCATTCCCGTGTGACTCCTGGGATTACAACAAGGGTTGCGTCCAAAGCTCACAGCGTTGAGGAAGAGCGAGCAACCTGTTACTAAAGCTAGGTGACAGAGTCCATGCAGTTTCCCCC-GTTT--------------TTTGTTTTTCTTGGCACTTCAGAGTCAAGAAACACAAGTCGTGAGACTTTAAGGAGTAAGTAGCAGAAACATGATTAAGGA-AAAAAGTGGAGCCACTAAAGAAGTGAAGCCCCTCTCTGGGGCTTCACCAAGACCCCCACTATCTTTATTAGTGTGCTTTGAGTCTGAGAATTTTTCCTAGGTGTGCAATGCTCTGTAGTCACATTACAGAGCCAAGTCTGCGATGCTTCACACGCCTGGTCCTCTGCACCAACAGAAGGTCTCCCATCCAGACCCTTCCCCTACTTGGTTC----ACTGAGAGAGAAATGCGTCGGCATTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102587119 855 - 106955855 ggccgggcgc-ggtggctcatgcctgtagtcctggcactttgggagagtgaagtaggtggatcacttgaggtctggagttcgagaccagcctggccaacatggtgaaaccctgtctctacgaaaaatataaaaaataagctgggcatggtggcacacgcctgtagtcccagctactcaggaggctgagagaagagaattgcttgaacctgggaggcggaggttgcagtgagccgagattgcaccactgcatcatacactcgactgaccgagaccccaactcaaaaaaGCATCCCTCTCAGGAGATAAAATTTCTACCAATTaaaaaacaaaaacaaaaaatcaaacaaaaaacaaaacaaaacaaaa-aaaCTAGTTCTTGAGCAATATTGCCATGCAAGTCtacatcagagcgttttaaattctta-caacaaccctgcaaggtagtacaattatttccctcccactggtgaagGGCATGCATTCCCGTGTGACTCCTGGGATTACAACAAGCGTTGCGTGCAAAGCTCACAGCGTTGAGGAAGAGCGAGCAACCTGGTACTAAAGCTAGGCGACAGAGTCCATGCAGTTCCCCCA-GTTT--------------TTTGTTCTTCTTGGCACTTTAGAGTCAAGAAACACAAGTCATGAGACTTTAAGGAGTAAGTAGCAGAAACATGATT-------------------------------------------------------------CCGCTGTCTTTGTTAGTGTGCTTTGAGTCTGAGAATTTTTCCTAGGTGTGCAATGATCTGTGGTCGCATTACAGAGCCAAGTCTGAGATGCTTCACATGCCTGGTCCTCTGCACCAACAGAGGGTCTCCCGTCCAGACCCTTCACCTACTTGGTTCACTGACTATGTT-----TGCGTTGGCATTT i nomLeu3.chr10 C 0 I 318 s calJac3.chr22 45304249 872 + 49145316 ggctgggcgc-ggtggctcacacttgtaatcccagcactttgggaggccgaggcgggtggat--cctgaggtcaacagatcgagaccatcctggtcaacatggtgaaaccccgtctctactaaaaatacaaaaaattagctgggcatggtggcgcgggcctgtaatcccagctactcgggaggctgaagcaggagaattgcctgaacccaggaggcggaggttgcggtgagccgagatcgcaccattgc----------------------actccagcctgggtaa----------caagagtgaaactgtgtctcaaaagcaaagc-aaaac-------------------aaaacaaaacaaaaaaaaCGAGTGCTTGAGCAATATCGCCATGTAAGTCTACGTCGtagcgtgttaaattctta-caacaaccctgcaaggtagcaccattattcccatcccactggtgaagGGCACACGTTCCCATGTAACTCCCGGGATTATGACAAGGGTTCCTTCCAAAGCTCACAGCGTTGAGGGAGAGTGAGCAGCCTGTTAGTAAGTCTGGGTGACGGAGTCCATGCAATTCCCCtg-tttttgtttttgtttttgtttttttttCTTGGCACGTGAGGTTCAGGAAACACACGTCATGAGACTTTAAGGAGTAAGTAGCAGAAACATGATCGAACACAAAAAGGTGAGCAACTTCGGAAGTGAAGCCCCAGAGCGGGGCCTCACCAAGACCCTCACTGTGTTTGTTAGTGTGCTTGGAGGCTGAGAATGCTTCCTGGGTGTGCGATGACCTGTGGCCACATCGCAGAGCCGCGTCTGAGATGC-TCACACGCCTGGTCCTCTGCACCAACAGA--GCTTCCCATCCA-ACCCTTC-CCTACTTGGTTCCCTCGCTGTGCT-----TGCGTCGGCATTT i calJac3.chr22 I 2530 C 0 e canFam3.chr1 19467539 817 - 122678785 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=156268.000000 s hg38.chr19_GL949747v2_alt 19538 259 + 729520 ctacatatctatatatagagaattacctatctaatttatctatctcgctaatctatctaccatctgtctaggtatctattatctatctacctatctatctttatctgtctctgtacctacttacctatcatctatccaatctatc-cgtcctatctaattatgatttatctatctacctacttgcctatcacctatccaatctatctatcctatcatatgtaattaactatctgtctgtcta---atttttctatcttgttaa s panTro4.chr19 58956250 259 + 63644993 CTACATATCTATATATAGAGAATTACctatctaatttatctatctcgctaatctatctaccatctatctaggtatctattatctatctacctatctatctttatctgtctctgtacctacttacctatcatctatccaatctatc-cgtcctatctaattatgacttatctatctacctacttgcctatcacctatccaatctatctatcCTATCATATGTAATTAACTATCTGTCTGTCTA---ATTTTTCTATCTTGTTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55822665 258 + 60714840 CTACATGTCTATATAGAGTGAATTACCTATCTAATTTATCTATCTCGCTAATCTATCTACCAtctatctaggtatctattatctatctacctatcta----tatctgtttctctacttacttacctatcatctgtccaatctatc-cgtcctatctaattatcacttatctatctacctagttgcctatcacctatccgatctatctatcctatcatatgtaattaactatctatctgtctgtctaATTTTCTATCTTGTTAA i ponAbe2.chr19 C 0 I 359 s nomLeu3.chr10 102588292 242 - 106955855 CTACATGTCTATATATAGAGAATtacctatctaatttatctatctcgctaatctatctaccatctatctaggtatctattatctatctacctatctatctttatctgtttctctacctacttacctatcatctatccaatctatc-tgtcctatctaattatcacttatctatctacctacttgcctatcacctatccaatctatcc---------tatgtaattaa--------ctgtcta---atttttctatcttgttaa i nomLeu3.chr10 I 318 C 0 s calJac3.chr22 45305121 181 + 49145316 CTACAGACCTATGCAGGGAGAAGTACCTGCCTAATTTATCTGTCTCACTCAtctgtc----------------------catctgtctgcctagctatctttatctgtctctctacctacttacctatcatctatccaatctatcttgtcacatctaattatc---tatctatctttcta------------------------------------------------------tctgtgta---attttcctgtcttgctaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=24832.000000 s hg38.chr19_GL949747v2_alt 19797 58 + 729520 tctatcacttatctaggcatctatgtatctatctttatctgtctatccacctgcttac s panTro4.chr19 58956509 58 + 63644993 TCTATCACTTATCTAGGCAtctatgtatctatctttatctgtctatccacctgcttac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102588534 58 - 106955855 tctatcgcttatctaggcatctatgtatctatctttatctgtctattcacctacttac i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45305302 48 + 49145316 tctatcacctatctagacatcta----------tctatctgtctatccacctaattac i calJac3.chr22 C 0 I 1392 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55822923 359 + 60714840 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=69663.000000 s hg38.chr19_GL949747v2_alt 19855 195 + 729520 ctgctgtctgtctaatctatccatcctatcatatctaattatc-----acttatctatc-------taccgacttacctatcatctagttaccaaatctatcatctatctaatgtatctatcaatcataaccagttatctatcatct----atcatctatcatctgtatgtatctgtctattcacctactattatctatttaatctattct-- s panTro4.chr19 58956567 199 + 63644993 ctgttgtctatctaatctatccatcctatcatatctaattatc-----acttatctatc-------taccgacttacctatcatctagctaccaaatctatcatctatctaatgtatctatcaatcataaccagttatctatcatctctctatcatctatcatctgtatgtatctgtctattcacctactattatctatttaatctactct-- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102588592 199 - 106955855 ctgtcgtctgtctaatctatccatcctatcatatctaattatc-----acttatctatc-------tactgacttacctatcatctagctaccaaatctatcagctatctaatgtatctgtcaatcataactagttatctatcatctctctatcatctatcatctgtatgtatctgtctattcacctactataatctatttaatctatcct-- i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45306742 193 + 49145316 ctatcatctatctaatgtatctatcc-attgtacctaattatccaattgatcatctatcttatctatatcaagttatctatcatctatct----aatctatcatctatctaatgtatctatcCATTGTACCTAATTATCCA--AGTG----ATCatctatc--ttatctatatcaagttat-------ctatcatctatctaatctatcatct i calJac3.chr22 I 1392 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55822923 359 + 60714840 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=124117.000000 s hg38.chr19_GL949747v2_alt 20050 220 + 729520 atctagt-tatctatctatctatccacc----------------tacttatctaat---ttttctatcttg-------caa---ctc-tatcacctatctaggtatcta-----tgtatctatctgtgtatctgtatatctatctatctatctagctagctttatctagctacctagttacctatcatctatctatctaatctatcatctatctaatgtatctatcaatcatatctaattatctgtctatctaatc s panTro4.chr19 58956766 220 + 63644993 atctagt-tatctatctatctatctacc----------------tacttatctaat---ttttctatcttg-------caa---ctc-tatcacctatctaggtatcta-----tgtatctatccgtgtatctgtatatctatctatctatctagctagctttatctagctacctagttacctatcatctatctatctaatctatcatctatctaatgtatctatcaatcatatctaattatctgtctatctaatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55823282 213 + 60714840 atctagt-tatctatctatgtatctacc--------------------tatctaat---ttttctatctTG-------CAA---CTCTTATCACctatctaggtatcta-----tgtatctatccatgtatctgtatatctagctagctagctagctagcttgattgagctacctagttacctatc----atctatctaatctatcatctatctaatgtatctaccaatcatatctaattatctgtctatctaatc i ponAbe2.chr19 I 359 C 0 s nomLeu3.chr10 102588791 227 - 106955855 atctagt-tatctatctatctatctatctatctatctatctatctacctatctaat---ttttctattttg-------caa---ctc-tatcacctatctaggtatcta-----tgtatctatccatgtatctgtatgt----ctatctatctagctagctttatctagctacctacttacctatc----atctatataatctatcatctatctaatgtatctatcaatcatatctaattttctatcta-atcatc i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45306935 223 + 49145316 atctaatgtatctatcaat---tgtacc----------------taattatccaattgatcatctatcttatctatatcaagttatc-tatcatctatcta---atctatcatctgtatctaccta-----ctgaggat-catctatctaatctatcatctgtatctatctacctactcacctatcatctgtctacctaatctatcatctatctaatgtatctatccattgtacctaattatccaattg----atc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=169802.000000 s hg38.chr19_GL949747v2_alt 20270 146 + 729520 atctatcttatctattatatctagttatctatcatctagctag--------------------------------ctagctaatctatctg-----------tatctatctacctacttacctatcgtctatttatctatctaatct---atcatatctagttatctatctacttact-------tatcta----acctgttg s panTro4.chr19 58956986 150 + 63644993 atctatcttatctattatatctagttacctatcatctagctag--------------------------------ctagctaatctatctg-----------tatctatctacctacttacctatcatctatttatctatctaatct---atcatatctagttatctatctacttact-------tatctatctaacctgttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55823495 138 + 60714840 atctatcttttctattatctctagttatctatcatctagctag--------------------------------ctagctaatctatctg---------------gatctacctacttacctatcatctatttatctatctaatct---atcatatctagttatctatc----tatc-------tatcta----acctattg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102589018 146 - 106955855 atctaccttatctattatatctagttatctatcatctagctag--------------------------------ctagctaatctatctg-----------tatctatctacctacttacctatcatctatt----tatctaatct---atcatatccagttatctatctagttact-------tatctatctaacctattg i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017983 128 + 51301725 atctattttatctactatatctagttatctatcatctagctag--------------------------------ctagctaatc-atctg-----------tatctatctacctacttacctattatccatttatctatctaacct---atcatatctagttatctatctattg---------------------------- i papAnu2.chr19 I 22 C 0 s chlSab2.chr6 46731008 124 + 50890351 atctattttatctactatatctagttatctatcatctagctag--------------------------------ctagctaatc-atctg-----------tatctatctacctacttacctattatccatttatctatctaacct---atcatatctagttatctattg-------------------------------- i chlSab2.chr6 I 41 C 0 s calJac3.chr22 45307158 196 + 49145316 atctatcttatc---tatatcaagttatctatcatctatctaatctatcatctgtatctacctaCTGACGATCATCTGTCTAATCTATCTGCCAtatctagttatctgtctacctacttgcctattacctatt----tatctagtctgtcatcatatgtagttatgtatctacctaccgtctatgtctctatctaatctattg i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=627254.000000 s hg38.chr19_GL949747v2_alt 20416 336 + 729520 tatctagttatctatctacctacttacctatcatctgtctatctatctaatctgtccatcg-tatctagctacttatctacctatcatcta--tgtatctatctaatctatcatatctagttatctatttatctgcctacttgcctat----tatctatcacatctaattatctatctat-cCCCCTCCCTGAAATAAGGTTCTTTCTGAGCTGATCATCAGggagcagcaaaaggagtggggagtttgaaacaagacatatttgagttctagtactgggtctcctacctcctgactttgtaaatgttcccttccctttctggaatacgttattttttggttaa s panTro4.chr19 58957136 336 + 63644993 tatctagttatctatctacctacttacctatcatctgtctatctatctaatctgtccatca-tatctagctacttatctacctatcatcta--tgtatctatctaatctatcatatctagttatctatttatcttcctatttacctat----tatctatcacatctaattatctatctat-cCCCCTCCCTGAAATAAGGTTCTTTCTGAGCTGATCATCAGggagcagcaaaaggagtggggagtttgaaacaagacatacttgagttctagtactgggtctcctacctcctgactttgtaaatgttcccttccctttctggaatacgttattttttggttaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55823633 332 + 60714840 tatctagttatctatctacctacttacctatca----tctatctatctaatctgtctatca-tatctagctactgatctacctatcatcta--tgtatctatctaatctatcatatctagttatctatttatctacctacttacctat----tatctatcatatttaattatctatctat-cCCCCTCCCTGAAATAAGGTTCTTTCTGAGCTGATCATCAGAGAgcagcaaaaggagtggagagtttgaaacaagacatacttgagttctagtactgggtctcctacctcccgactttgtaaatgttcccttccctttctggaatacgttattttttggttaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102589164 280 - 106955855 tatctagttatctatctacctgc-----------------------------------------------------ttaacctatcatc------tgtctatctaatctatcatatctagttatctatttatctacctacttacctat----tatctatcatatctaattatctatctat-cCCCCTCCCTGAAATAAGGTTCTTTCTGAGCTGATCATCAGggagcagcaaaaggagtggagagtttgaaacaagacatacttgagttctagtactgggtctcctacctcctgactttgtgaatgttcccttccctttctggaatacgttattttttggttaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59880073 332 + 64156825 tatctatttatctatctacctacttacctatcacctgtctc----tctaatccatctatca-tatctagctacctac----ctatcatcta--tgtatctatcttatctatcatgtctagttgtctatgtatctacctacttacctatcatctgtctatcatatctaattatctatttat-cCCCCTTCCTGAAATAAGGCTCTTTCTGAGCTGATCATCAGGGAGCAGCAAAAGGAGTGGAGAGTTTGAAACAAGACAAACTTGAGTTCTAGTAGTAGGTCTCCCATCTCCTGACTTTGTAAATGTTCCCTTCCCTTTCTGGAATACATTATTTTTTGGTTAA i rheMac3.chr19 I 119 I 417 s papAnu2.chr19 47018111 340 + 51301725 tatctaattatctatctacctacttaactatcatctgtctctctatctaatccgtctatcattatctagctacctacctagctatcatcta---gtatctatcttatctatcatgtctagttatctatttatctacctacttacctatcatctgtctatcatatctaattatctatttat-ctCCCTTCCTGAAATAAGGCTCTTTCTGAGCTGATCATCAGGGAGCAGCAAAAGGAGTGGAGAGTTTGAAACAAGACATACTTGAGTTCTAGTAGTAGGTCTCCCATCTCCCGACTTTGTAAATGTTCCCTTCCCTTTCTGGAATACATTATTTTTTGGTTAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46731132 324 + 50890351 tatctaat----tatctacctacttaactatcatctgtcta----tctaa----tctatca-tatctagctacctac----ctatcatcta---gtatctatcttatctatcatgtctagttatctatgtatctacctacttacctatcatctgtctatcatatctaattatctatttatcCCCCCTTCCTGAAATAAGGCTCTTTCTGAGCTGCTCATCAGGGAGCAGCAAAAGGAGTGGAGAGTTTGAAACAAGACATACTTGAGTTCTAGTACTAGGTCTCCCATCTCCCATCTTTGTAAATGTTCCCTTCCCTTTCTGGAATACATTATTTTTTGGTTAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45307354 305 + 49145316 tatcta---------ctacctgcttctct--------cctatttatctaa----tctatca-tatctagctatctac----ctaccatctatctacatctatctaATGTATCATATCGAGTTACCTA--------CCTACTCACCTGTCATCTGTCTATCATATCTAAGTATCTGT-----CTCCCTCCCTGAAATAAGGCTCTGTCTGAGCAGACCATCAGCcagcggcaaaaggagtggattctttgtaacaacgcacgcttgggttctagtactgagtctcccacctgccgactctgtaaatgttcccttccctttctggaatacgttattctttggttaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=10192.000000 s hg38.chr19_GL949747v2_alt 20752 4 + 729520 atat s panTro4.chr19 58957472 4 + 63644993 atat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55823965 4 + 60714840 atat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102589444 4 - 106955855 atat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59880822 4 + 64156825 ATAT i rheMac3.chr19 I 417 C 0 s papAnu2.chr19 47018451 4 + 51301725 ATAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46731456 4 + 50890351 ATAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45307659 4 + 49145316 atat i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=1354260.000000 s hg38.chr19_GL949747v2_alt 20756 514 + 729520 aagga-gggggcagagagctaataatatctaacttgaagagttaggtaatgatgaaaaatcctggctttaaagcgctcagtctagaaactgactcattgtGTCGGATAATGGGATTGTAGGTATAATGATGATTTTTTTTCACCCAATATTCCACCTACACCCATCTCTCTCTGTAATAGATTCTGTCAATGTTCCTCAACCCATGTTCCCCAGATCCCTTTCCCATTTTTATGCATTCTAGATCGTGGCTTCTTTCCCTTTCCAAAGTGAACATTTGTATCTCTTCTTTGGGGGACTGCCTGGGAGAACTCCAAATGCCTTGGAATTTA--CATGCCCGGGACAAACTGCCAC--TGACGGCTGT--------------GGGGACCCCAGCTCC-CTAGCCTCT---------GGTCTTCGACCTTCTCTGTCTCCACTGC--TTTCTGCAGGATGGAGCCAAAGATACCATCTGAGGGACACAGATATCCCACACTTGTTTAATCTATTTTCCTCCCAGCCCTTCTTCCCC---ACT-CCCTAAAAT s panTro4.chr19 58957476 514 + 63644993 aagga-gggggcagagagctaataatatctaacttgaagagttaggtaatgatgaaaaatcctggctttaaagcactcagtctagaaactgactcattgtGTAGGATAATGGGATTGTAGATATAATGATGATTTTTTTTCACCCAATATTCCACCCACACCCATCTCTCTCTGTAACAGATTCTGTCAATGTTCCTCAACCCATGTTCCCCAGATCCCTTTCCCATTTTTATGCATTCTAGATCGTGGCTTCTTTCCCTTTCCAAAGTGAACATTTGTATCTCTTCTTTGGGGGACTGCCTGGGAGAACTCCAAACGCCTTGGAATTTA--CATGCCCGGGGCAAACTGCCAC--TGACTGCTGT--------------GAAGACCCCAGCTCC-CTAGCCTCC---------AGTCTTTGACCTTCTCTGTCTCCACTGC--TTTCTGCAGGATTGAGCCAAAGATACCATCTGAGGGACACAGATATCCCACACTCGTTTAATCTATTTTCCTCCCAGCCCTTCTTCCCC---ACT-CCCTAAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55823969 515 + 60714840 aaaga-gggggcagagagctaataatatctaacttgaagagttaggtaatgatgaaaaatcctggctttaaagcactcagtctagaaactgactcattgtGTAGGATAATGGGATTGTAGGTATAATGATGATTTTTTTTCACCCAATATTCCACCCACACCCATCTCTCTCTGTAACAGATTCTGTCAATGTTCCTCAACCCATGTTCCCCAGATCCCTTTCCCATTTTTATGCATTCTAGATCGTGGCTTCTTTCCCTTTCCAAAGTGAACATTTGTATCTCTTCTTTGGGGGACTGCCTGGGAGTGCTCCAAATGCCTTTGAATTTA--CATGCCCGGGGCAAACTGCCAC--TGACTGCTGT--------------GAAGACCCCAGCTCC-CTAGCCTCC---------GGTCTTTGACCTTCTCTGTCTCCACTGC-TTTTCTGCAGGATTGAGCCAAAGATACCATCTGAGGGACACAGATATCCCACCCTTGTTTAATCTCTTTTCCTCCCAGCCCTTCTTCCCC---ACT-CCCTAAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102589448 514 - 106955855 aagga-gggggcagagagctaataatatctaacttgaagagttaggtaatgatgaaaaatcctggctttaaagcactcagtctagaaactgactcattgtGTAGGATAATGGGATTGTAGGTATAATGATGA-TTTTTTTCACCCAATATTCCACCCACACCCATCTCTCTCTGTAACAGATTCTGTCAATGTTCCTCAACCTATGTTCCCCAGATCCCTTTCCCACTTTTATGCATTCTAGATCGTGGCTTCTTTCCCTTTCCAAAGTGAACATTTGTATCTCTTCTTTGGGGGACTGCCTGGGAGAGCTCCAAATGCCTTGGAATTTA--CATGCCCAGGGCAAACTGCCAC--TGACTGCTGT--------------GAAGACCCCAGCTCC-ATAGCCTCT---------GGTCTTTGACCTTCTGTGTCTCCACTGC-TTTTCTGCAGGATTGAGCCAAAGATACCATCTGAGGGACACGGATATCCCACCCTTGTTTAATCTCTTTTCCTCCCAGCCCTTCTTCCCC---ACT-CCCTAAAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59880826 511 + 64156825 AAGGA-GGGGGCAGAGAGCCAATAATACCTAACTTGAAGAGTTAGGTAATGATGAAAAATCCTGGCTTTAAAGCACTCAGTCTAGAAACTGACTCATTGTGTAGGATAATGGGATTGTAGGTATAATGATGATTTTTTTTCACCCAATATTCCACCCACGTCCA----TCTCTGTAACAGATTCTGTCAATGTTCCTCAACCCATGTTCCCCAGATCCCTTTCCCATTTTTATGCATTCTAGATTGTGGCTTCTTTCCCTTTCCAAAGTGAACATTTGCATCTCTTCTTTGGGGGACTGCCGGGGAGAGCTCCAAATGCCTTGGAATTTA--CATGCCCGGAACAAACTGCCAC--TGACTGCTGT--------------GAAGACCCCAGCTCC-CTAGCCTCT---------GGTGTTTGACCTTCCCTGTCTCCGCTGC-TTTTCTGCAGGATTGAGCCAAAGATACCATCTGAGGGACACGGATATCCCACTCTTGTTTAATCTCTTTTCCTCCCGGCCCTTCTTCCCC---ACT-CCCTAAAAT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47018455 516 + 51301725 AAGGAGGGGGGCAGAGAGCCAATAATACCTAACTTGAAGAGTTAGGTAATGATGAAAAATCCTGGCTTTAAAGCACTCAGTCTAGAAACTGACTCATTGTGTAGGATAATGGGATTGTAGGtataatgatgattttttttcaccCAATATTCCACCCACGCCCATCTCTCTCTGTAACAGATTCTGTCAATGTTCCTCAACCCATGTTCCCCAGATCCCTTTCCCATTTTTATGCATTCTAGATTgtggcttctttccctttccaaAGTGAACATTTGCATCTCTTCTTTGGGGGACTGCCTGGGAGAGCTCCAAATGCCTTGGAATTTA--CATGCCCGGAACAAACTGCCAC--TGACTGCTGT--------------CAAAACCCCAGCTCC-CTAGCCTCC---------GGTCTTTGACCTTCCCTGTCTCCACTGC-TTTTCTGTAGGATTGAGCCAAAGATACCATCTGAGGGACACGGATATCCCACCCTTGTTTAATCTCTTTTCCTCCTGGCCCTTCTTCCCC---ACT-Ccctaaaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46731460 516 + 50890351 AAGGA-GGGGGCAGAGAGCCAATAATACCTAACTTGAAGAGTTAGGTAATGATGAAAAATCCTGGCTTTAAAGCACTCAGTCTAGAAACTGACTCATTGTGTAGGATAATGGGATTGTAGGTATAATGATGATTTTTTTTCACCCAATATTCCACCCACACCCATCTCTCTCTGTAACAGATTCTGTCAGTGTTCCTCAACCCATGTTCCCCAGATCCCTTTCCCATTTTTATGCATTCTAGATTGTGGCTTCTTTCCCTTTCCAAAGTGAACATTTGCATCTCTTCTTTGGGGGACTGCCTGGGAGAGCTCCAAATGCCTTGGAATTTA--CATGCCCAGAACAAACTGCCAC--TGACTGCTGT--------------GAAGACCCCAGCTCC-CTAGCCTCC---------GGTCTTTGACCTTCCCTGTCTCCACTGCTTTTTCTGCAGGATTGAGCCAAAGATACCATCTTGGGGACACGGATATCCCACTCTTGTTTAATCTCTTTTCCTCCCGGCCCTTCTTCCCC---ACT-CCCTAAAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45307663 516 + 49145316 aagga-ggaggcagagagctaataatatctaacttgaggagttaggtaatgatgaaaaatcctggctttcaagcactcagtctagaaactgactcactgtGTAGGATAATGGGATTGTAGGTATAATGATGA---TTTTTCACCCAATATTCCACCCACACCCATCTCTCTCTGTAACAGATTCTGTCAGTGTTCCTCAACCCATGTTCCCCAGATCCCTTTACCATTTTTATGCATTCTAGATCGAGGCTTCTTTCCCTTTCCAAAGTGAACACTTAGGTCTCTTCTTTGA------GCCAGGGAGGACTCAAAATGCCTTGGAATGTA--TATTCCCTG-CCAAACTGCCAC--TGCCTGCTGTTTGCAGGGAAATAGAAAGACCACAGCTCC-----CCTCC---------CGTCTTTGACCTTCTCTGTCTCCACTGC-TTTTCTGCAGAATTGGGCCAAATATACCATCTGAGGGACATGAATATCCCACCCGTGTTTAATTTCTTTTCCTCCCAGGCCTTCTTCCCC---ACTCCCCTAAAAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19468356 518 - 122678785 AAGGA-CAGGG--GCGGGATGAGAATCCCTAACTTGAAGAGCTGGGTAATGATGGAAGGCACTGGCTTCAAAGCACAGAGCCT-GGATCTGACTCATGATGTAGGATAATGAGATTGCGGTGATAACGATTA--TTCTCTCTCCCGATATCCCACCCACACCTGTCTCCCTCTGTAACAGACGATGCCAGTGCTCCACACTGCTTG---CCCAGATCCCTTTGCCATTTTAATGCGCTCTGGATCATGGTTTATTTCACCTTCCAATGCGGACACTTGCTTCTCTT-TGTGGGGGACTGCCAGGAAGGACCCAAAATGCCTCGGGATCTATGTATTCCAGGGACATCTCTTTACCATGACTGCCATTTGTGGAAGCAT--GAATGCCCTAGTTCTGTTGGTCACCAGTTGCCAGGGTGTGTGACCTTCTATGTCTCCTCCAC-TTTCC--CAGCTCCATGCAAAAGATGCGGT-GGAGGGATG-------------ATTGCTCAGTC-CTTTACTTCTCAGCCCTCTTTCCCCTGTACC-CCCTACAAT i canFam3.chr1 I 817 C 0 e macFas5.chr19 54882420 20327 + 59248254 M a score=19977.000000 s hg38.chr19_GL949747v2_alt 21270 10 + 729520 GTAATTTTCA s panTro4.chr19 58957990 10 + 63644993 GTAATTTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824484 10 + 60714840 GTAATTTTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102589962 10 - 106955855 GTAATTTTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59881337 10 + 64156825 GTCATTTTCA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47018971 10 + 51301725 gtcattttca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46731976 10 + 50890351 GTCATTTTCA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19468874 10 - 122678785 GTTACATTCA i canFam3.chr1 C 0 I 49 e calJac3.chr22 45308179 0 + 49145316 C e macFas5.chr19 54882420 20327 + 59248254 M a score=374368.000000 s hg38.chr19_GL949747v2_alt 21280 216 + 729520 Agccaggcgtggtggctcacacctgtaatcccagcactttgggaggtcgaggcaggcagagcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccgtctctactaaaaatagaatattagctgggtgtggtggtgcatgcctgtaatcccagctatttgggaggctgaggcaggagaatctcttgaacctggtaggcgga s panTro4.chr19 58958000 216 + 63644993 Agccaggcgtggtggctcacacctgtaatcccagcactttgggaggtcgaggcaggcagatcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccatctctactaaaaataaaatattagctgggcgtggtggtgcatgcctgtaatcccagctatttgggaggctgaggcaggagaatctcttgaacctggtaggcgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824494 216 + 60714840 agccaggcatggtggctcacgcctataatctcagcgctttgggaggtcgaggcgggcagatcacctgagctcaggagtttgagaccagcctgaccaacatgtagagactccacctctactaaaaatacaatattagctgggcgtggtggtgcatgcctgtaatcccagctatttgggaggctgaggcaggagaattgcttgaaccccgtaggcaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102589972 216 - 106955855 Agccaggcacggtggctcacgcctgtaatcccagtactttggaaggtcgaggcgggcagatcacctgaggtcgggagttcgagaccagcctgaccaacacggagaaaccccatctctactaaaaatacaatattagccgggcgtggtggtgcatgcctgtaatcccagctatttgggaggctgaggcaggagaattgcttgaacccggtaggcgga i nomLeu3.chr10 C 0 M 1381 s rheMac3.chr19 59881347 216 + 64156825 Cgccgggcgtggtggctcactcctgtaatctcagcactgtgggaggccaaggtgggcagatcacctgaggtcgggagttcgagaccagcctgaccaacacagagaaaccccatctctactaaaaatacaaaattagccaggcgtggtggtgcacgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcgga i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47018981 216 + 51301725 cgccgggcatggtggctcactcctataatctcagcactgtgggaggccaaggtgggcggatcacctgaggtcgggagttcgagaccagcctgaccaacacggagaaaccccatctctactaaaaatacaaaattagccaggcgtagtggtgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggcgga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46731986 216 + 50890351 Cgccgggcgcggtggctcacacctgtaatctcagcactgtgggaggccgaggtgggcggatcacctgagatcgggagttcgagaccagcctgaccaacacggagaaaccccatctctactaaaaatacaaaattagccaggcgtggtggtgcacacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcgaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e calJac3.chr22 45308179 0 + 49145316 C e macFas5.chr19 54882420 20327 + 59248254 M a score=117536.000000 s hg38.chr19_GL949747v2_alt 21496 97 + 729520 ggttgc-agtgagccaagatcacgccattgcactccagcctgggcaacaagagcgaaactctgtctcaaaactaaataaataat-aaataaaataaaaC s panTro4.chr19 58958216 97 + 63644993 ggttgc-agtgagccaagatcacgccattgcactccagcctgggcaacaagagcgaaactctgtctcaaaactaaataaataat-aaataaaataaaaC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824710 97 + 60714840 ggttgc-agtgagccgagatcatgccattgcactccagcctgagcaacaagagcaaaactctgtctcaaaactaaataaataat-aaatgaaataaaaC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59881563 98 + 64156825 ggttgc-agtgagccaagatcatgccactgcactccagcctgggcaacaagagcgaaattctgtctcaaaaataaataaataataaaataaaataaaAT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47019197 99 + 51301725 ggttgcaaatgagccaagatcatgccactgcactccagcctgggcaacaagagcgaaattctgtctcaaaaataaataaataataaaataaaataaaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46732202 94 + 50890351 ggttgc-agtgagccaagaccatgccactgcactccagcctgggcaacaagagcgaaattctgtctcaaaaataaataaataataaaataaaaTA---- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e calJac3.chr22 45308179 0 + 49145316 C e nomLeu3.chr10 102590188 1381 - 106955855 M e macFas5.chr19 54882420 20327 + 59248254 M a score=15472.000000 s hg38.chr19_GL949747v2_alt 21593 17 + 729520 GTCAC----------TTTCACACTAAT s panTro4.chr19 58958313 17 + 63644993 GTCAC----------TTTCACACTAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824807 17 + 60714840 GTCACNNNNNNNNNNtt---------- i ponAbe2.chr19 C 0 I 4 s rheMac3.chr19 59881661 17 + 64156825 GTCAC----------TTTCACACTAAT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47019296 17 + 51301725 atcac----------tttcACACTAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46732296 16 + 50890351 -TCAC----------TTTTACACTAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45308179 17 + 49145316 GTCAC----------TTTTGCACGAAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e nomLeu3.chr10 102590188 1381 - 106955855 M e macFas5.chr19 54882420 20327 + 59248254 M a score=69553.000000 s hg38.chr19_GL949747v2_alt 21610 58 + 729520 GCTGTCTAAGAGCCTGCTTCTGGTGGAGCTGAATCAGAGAACCCCTCAAAAGCAACAA s panTro4.chr19 58958330 58 + 63644993 GCTGTCTAAGAGCCTGCTTCTGGTGGAGCTGAATCAGAGAACCCCTCAAAAGCAACAA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59881678 58 + 64156825 GCTTTCTAAGGGCCTGCTTCTGGTGGAGCTGAATCAGAGGACCCCTCAAAAGCAACAA i rheMac3.chr19 C 0 I 8 s papAnu2.chr19 47019313 58 + 51301725 GCTTTTTAAGGGCCTGCTTCTGGTGGAGCTGAATCAGAGAACCCCTCAaaagcaacaa i papAnu2.chr19 C 0 I 8 s chlSab2.chr6 46732312 58 + 50890351 GCTTTCTAAGGGCCTGCTTCTGGTGGAGCTGAATCAGAGAATCCCTCAAAAGCAACAA i chlSab2.chr6 C 0 I 8 s calJac3.chr22 45308196 54 + 49145316 ----GCTAAGAGCCTGCTTTTGGTGGAGCTGGATCTGAGAACACCTCAAGGGCAACAC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e ponAbe2.chr19 55824824 4 + 60714840 I e nomLeu3.chr10 102590188 1381 - 106955855 M e macFas5.chr19 54882420 20327 + 59248254 M a score=71081.000000 s hg38.chr19_GL949747v2_alt 21668 52 + 729520 -ttttttt---tttttt----gagaca--gtctcactctgtctcccaggctggagtgcagtg s panTro4.chr19 58958388 49 + 63644993 -ttttttt---ttttttt---gagaca--atctc----tgtctcccaggctggagtgcagtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824828 52 + 60714840 -ttttttt---tttttt----gagaca--gtctcactctgtctcccaggctggagtgcagtg i ponAbe2.chr19 I 4 C 0 s rheMac3.chr19 59881744 54 + 64156825 -ttttttt---tttttt----gagacagagtcttactctgtcaccctggctggagtgcagtg i rheMac3.chr19 I 8 C 0 s papAnu2.chr19 47019379 58 + 51301725 -ttttttt---tttttttttggagacagtgtcttactctgtcaccctggctggagtgcagtg i papAnu2.chr19 I 8 C 0 s chlSab2.chr6 46732378 61 + 50890351 -tttttttttattttttttttgagatagagtctcactctgtcaccctggctggagtgtagtg i chlSab2.chr6 I 8 C 0 s calJac3.chr22 45308250 58 + 49145316 ttcttttttaatttttt----gaaacagagtctcactctgtcgcccaggctggagtgcagtg i calJac3.chr22 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e nomLeu3.chr10 102590188 1381 - 106955855 M e macFas5.chr19 54882420 20327 + 59248254 M a score=24930.000000 s hg38.chr19_GL949747v2_alt 21720 13 + 729520 gtacaatctcggc s panTro4.chr19 58958437 13 + 63644993 gtacaatctcggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824880 13 + 60714840 gtacaatctcggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102591569 13 - 106955855 GTAcaatctcagg i nomLeu3.chr10 M 1381 C 0 s rheMac3.chr19 59881798 13 + 64156825 gctcaatcttggc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47019437 13 + 51301725 gctcaatcttggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46732439 13 + 50890351 gctcaatcttggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45308308 13 + 49145316 gtgcaatctcggc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=365110.000000 s hg38.chr19_GL949747v2_alt 21733 222 + 729520 --tttggaacctccccctctggggttcaagcaattctcctgcctcagcctcccaaggagctgggattacaagcacccgccacctcaccccgctaattttttatatttctagtagagatgaggtttcaccatgttggttaggctggtctcaaactccagagctcaagtgttctgcccactttggcctcccaaagtgctgggatta----cataagccaccatgcctggc s panTro4.chr19 58958450 221 + 63644993 --tttggaacctccacctctggggttcaagcaattctcctgcctcagcctcccaaggagctgggattacaagcgcccgccacctcaccccgctaattttttatatttctagtagagatgaggtttcaccatgttggttaggctggtctcaaattccagagctcaagtgttctgccc-ctttggcctcccaaagtgctgggatta----cataagccaccatgcccggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824893 222 + 60714840 --tttgcaacctccgcctccggggttcaagcaattctcctgcctcagcctcccaaggagctgggattacaagcgcccgccacctcgccccgctatttttttatatttctagtagagatgaggtttcaccatgttggctaggctggtctcaaactccagagctcaagtgttctgcccaccttggcctcccaaagtgctgggatta----catgagccaccatgcacggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102591582 222 - 106955855 --tttgcaacctccacgtccggggttcaagcaattctcctccctcagcctcccaaggagctgggattacaagcgcccgccacctcaccctgctaattttttatatttctagtagagatgaggtttcaccatgttgcctaggctggtctcaaactccagagctcaagtgttctgcccacctttgcctcccaaagtgctgggatta----catgagccaccatgcccggc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47019450 225 + 51301725 --tttgcaatctccgcctccggggttcaggcaattctcctgcctcagcctcccaaggagctgggattacaggtgcccaccaccacgctctgctaattttttatatttctagtagagatgaggtttcaccatgttggccaggctggtctcgaactcctgagctcaggtgatc-gcccaccttggcctcccaaagtgctgggattataggcatgagccaccatgcctggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46732452 225 + 50890351 --tttgcaatctctgcctccagggttcaagcaattctcctgcctcagtctcccaaggagctgggattagaggtgcccgccaccatgccctgctaattttttatatttctagtagagatgaggtttcaccatgttggccgggctggtctcgaactcctgagctcaggtgatc-gcccaccttggcctcccaaagtgctgggattataggcatgagccaccgcgcctggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45308321 228 + 49145316 tcactacaacctccacctcctgggttcaagagattctcctgcctcagcctcccaaggagctgggattacatgtacctgccagcacaccctgctgatttttcatatttttagtagagacaaggtttcaccatgttggccaggctggtctcaaactcttgggctcaagtgatctgcccaccttggcctcccaaagtgctaggattacaggcacgagccactgcgcccagc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59881811 0 + 64156825 C a score=818858.000000 s hg38.chr19_GL949747v2_alt 21955 429 + 729520 cATAAGCAACAATTCTATCAGTGCATCTCCAAGGACTTATGAAAACAGGGCAGGAACAGCTGCTCCTGGACTC-TCAGTTTCCCCAGATGGAAGCAGAGAAACAGCAGCCTTGCCTTGTCCTTTCTGTTCTCCCCTTTTCCAGCCTACGGTATCTTTCACACAGCAATTCACTAGAAATGAGAAGTACATTATTGCAAAA--TTCTCATCTTCATATGA-CCCCATAATCAGCTGAACTGGGTTCACCCTGAGATGTCCACAGATCCTGGCC-AAATGTTGCATCAGTATTTGCAAATTGCCAGAATAAATCATAACTTGCTACGC-------TACTAAAGTCAGCGTGAGCAACAAGATACAGCCTGACACGGGGCATAAATGGAGGCACAGGCACCAGAAAGAAAGTCAAGTCTTGTGTGATAAAATTCATCTTCATTC s panTro4.chr19 58958671 429 + 63644993 cATAAGCAAGAATTCTATCAGTGCATCTCCAAGGACTTATGAAAACAGGGCAGGAACAGCTGCTCCTGGACTC-TCAGTTTCCCCAGATGGAAGCAGAGAAACAGCAGCCTTGCCTTGTCCTTTCTGTTCTCCCCTTTTCCAGCCTACAGTATCTTTCACACAGCAATTCACTAGAAGTGAGAAGTACATTATTGCAAAA--TTCTCATCTTCGTATGA-CCCCATAATCAGCTGAACTGGGTTCACCCTGAGATGTCCACAGATCCTGGCC-AAATTTCGCATCAGTATTTGCAAATTGCCAGAATAAATCATAACTTGCTACGC-------TACTAAAGTCAGCATGAGCAACAAGATACAGCCTGACACAGGGCATAAATGGAGGCACAGGCACCAGAAAGAAAGCCAAGTCTTGTGTGATAAAATTCATCTTCATTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55825115 429 + 60714840 cATAAGCAACAATTCTATCAGTGCATCTCCAAGGACTTATGAAAACAGGGCAGGAACAGCTGCTCCTGGACTC-TCAGTTTCCCCACATGGAAGCAGAGAAACAGCAGCCTTGCCTTGTCCTTTCTGTTCTCCCCTTTTCCAGCCTACAGTATCTTTCACGCAGCAAGTCACTAGAAATGAGAAGTACATTATTGCAAAA--TTCTCGTCTTCATATGA-CCCCATAATCAGCTGAACTGGGTTCACCCTGAGATGTCCACATATCCTGGCC-AAATTTCGCATCAGTATTTGAAAATTGCCAGAATAAATTATAAGTTGCTATGC-------TACTAGAATCAGCCTGAGCAACAAGATACATCCTGACACGGGGCATAAATGCGGCCACAGGCACCAGAAAGAAAGCCAAGTCTTGTGTGATAAAATTCATCTTCATTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102591804 428 - 106955855 cATAAGCAACAATTCTATCAGTGCATCTCCAAGGACTTATGAAAACAGGGCAGGAACAGCTGCTCCTGGACTC-TCAGTTTCCCCAGATGGAAGCAGAGGAACAGCAGCGTTGCCTTGTCCTTTCTGTTCTCCCCTTTTCCAGCCTACAGTATCTTTCACGCAGCAATTCACTAGAAATGAGAAGTACATTATTGCAAAA--TTCTTGTCTTCATATGA-CCCCATAATCAGCTGAACTGGGTTCACCCTGAGATGTCCACATATCCTGGCC-AAATTTCGCATCAGTATTTGCAAATTGCCAGAATAAATTATAAGTTGCTATGC-------TACTAGAATCAGACTGAGCAACAACATACAGCCTGACAC-GGGCATAAATGGAGCCACAGACACCAGAAAGAAAGCCAAGTCTTGTGTGATAAAATTCATCTTCATTC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47019675 432 + 51301725 cataagcAACAATTCTATCAGTGCATTTCCAAGGACTGATGAAAACAGGTCAGGAACAGCTGCTCCTGGACTCTTCTGTTTCCCCAGATGGAAGCAGAGAAACAGCAGCCTTGCCTCATCCTTTCTGTTCTCCCCTTTTCCAGCCTACAGTATCTTTCATGCAGCAATTCACTAGAAATGAGAAGTACATTATTGCAAAA--TTCTGGTCTTCACATGACCCCCATAATCAGCTGGACTGGGTTCACCCTGAGATGTCCACATATCCTGGCCAAAATTTCACATCAGTATTTACAAATTGTCAGAATAAATTATAAGTTGCTATGC-------TACTAGAATCAGACCGAGCAACAAGATACAGCCTGACACGGGGCACAAATGGAGCCACAGGCACCAGAAAGAAAGTCGAGTCTTGTGTGATAAAATTCATCTTCATTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46732677 431 + 50890351 cATAAGCAACAATTCTATCAGTGCATTTCCAAGGACTGATGAAAACCGGGCAGGAACGGCTGCTCCTGGACTCTTCCGTTTCCCCAGATGGAAGCAGAGAAACAGCAGCCTTGCCTCATCCTTTCTGTTCTCCCCTTTTCCAGCCTACAGTATCTTTCACGCAGCAATTCACTAGAAATGAGAAGTACGTTATTGCAAAA--TTCTCATCTTCCCATGACCCCCATAATCAGCTGGACTGGGTTCACCCTGAGATGTCCACATATCCTGGCC-AAATTTCACATCAGTATTTACAAATTGCCAGAATAAATTGTAAGTTGCTATGC-------TACTAGAATCAGACTGAGCAACAAGATACAGCCTGACACGGGGCACAAATGGAGCCACAGGCACCAGAAAGGAAGTCGAGTCTTGTGTGATAAAATTCATCTTCATTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45308549 407 + 49145316 AAAAAGAAACAATTCTATCAGTGCATCTCCAAGGACTTATGAATCCAGGGCAGGCACAGCTGCTCCTGGATCC-TTGGGTTCCCCAGATGGAAGCAGAGAAGCAGCAGCCTTGCCTTGTCCCTTCAGTTC---------------------ATTTTTCAAGCAACACTTTGCTCGAAATGAGAAGTACATTATTGTAAAA--TTCTCGTCTTCATATGA-CCCCATAACCAGCTGAATTGGGTTCCCCCCAAGATGTCCACATATCCCGGCC-AAATTTCACATCACTATTTACAAATTGCCAGAATACATTATAAATTACTATAT-------TGCTGGAATCAGACTGAACAACGGGATACAGCCTGAC-TGGGACATAAATGAAGCCACAGGCACCAGAAAGAAAGCCGGGTCTTGTGTGATAAAATTCATCTTCATTC i calJac3.chr22 C 0 I 327 s canFam3.chr1 19468933 385 - 122678785 CAAAAGCAGCAA-ACTCTCTGCACATCTCCAGGGACATAAGGAAACAGGATGGAAGCAGCTGTTCCCAGACTA-GTAGGACCCTCAATGGGAAGCAGAGAAACATCAGCC------------------TCTGGCTTCTTCC-----ACAGTGACTC----------ACTCACTAGAAATGAGAAGTAGACTATTACAAGACTTTTCCGCTTTCATACGG-CCCCATAACCTGCTGATCTGAGTTCACCCTGAGATGTCCACATTTCCTGGCC-AAATTTCATATCACTCCTTACAAACTGCCAGAGTAAATTACAAAGTCTCAGGTGTTGATGTAAAGGAATCAGGCTGAGCAGTGGGACACAGCTTGACACGGGGTGTAAATGAAGTCACCGTCACCAGAGAGGAGGCCTGGCCTTGTGTG------------------- i canFam3.chr1 I 49 C 0 e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59881811 0 + 64156825 C a score=158849.000000 s hg38.chr19_GL949747v2_alt 22384 110 + 729520 TCTACATTGCGATTGAACATAGAGTCGTTTTCTAGTGTGTTTTAGGCATATAAATACAGGCTGGGGACATCATACCTGTGCTTACAGATAtt-ttacttttattttattta s panTro4.chr19 58959100 105 + 63644993 TCTACATTGCGATTGAACATAGAGTCGTTTTCTAGTGTGTTTTAGGCATATAAATACAGGCTGGGGACATCATACCTGTGCTTACAGATAtt-ttacttttattt-----a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55825544 110 + 60714840 TCTACATAGCGATTGAACATAGGGTCCTTTTCTAGTGTGTTTTAGGCATATAAATACAGGCTGGGGACATTATACCTGTGCTTAAAGATAtt-ttacttttattttattta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102592232 110 - 106955855 TCTACCTAGCGATTGAACATAGGGTCCTTTTCTGGTGTGTTTGAGGCATATACATACAGGCTGGGGACATTATACCTGTGCTTAAAGATAtt-ttacttttattttatttc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47020107 106 + 51301725 TCTACAGAGCAATTGAATATAGGGTCCTTTTCTGGTGTGTTCAAGGCATATAAATACAGGCTGGGGACATTATACCTGTGCTtaaagatatt-ttacttttattt----ta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46733108 106 + 50890351 TCTACAGAGCAATTGAATATAGGGTCCTTTTCTGGTGTGTTTAAGGCATATAAATACAGGCTGGGGACATTATACCTGTGCTTAAAGATAtt-ttactgttattt----ta i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45309283 91 + 49145316 TCTACATAGCAGTTGAATATAGGGTCCTTTTCTTGTGTGTTTGAGGTATATAAATACAGGATGGGGACGTTATACCTGTGCTTAAAGATAt-------------------- i calJac3.chr22 I 327 C 0 s canFam3.chr1 19469318 64 - 122678785 -----------------CATGG---------------------AGACATCCGGATATGGGCCTGGGACATCATATCTGGGCTGAAAGACTTTATTCCGTTCA--------- i canFam3.chr1 C 0 I 25 e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59881811 0 + 64156825 C a score=230459.000000 s hg38.chr19_GL949747v2_alt 22494 133 + 729520 tttactgaaacagggtctcgctctgtcacccaggctggagtgctgtggcgcaatcacagttcactg-aagcctcaacctcctgggcgcaaacgatctttctgcctgagcctcccaagtagctgggactacaggt s panTro4.chr19 58959205 133 + 63644993 tttactgagatagggtctcgctttgtcacccaggctggagtgctgtggtgcaatcacagttcactg-aagcctcaacctcctgggtgcaaacggtcttcctgcctgagcctcccaagtagctgggactacaggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55825654 133 + 60714840 tttactgagacagggtctcgctctgtcacccaggctggagtgctgtggcgcaatcacggttcactg-aagcctcaacctcctgggctcaaatgatcttcctgcctgagcctcccaagtagctgggactacaggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102592342 133 - 106955855 tttactgagacagggtctcgctctgtcacccaggctggagtgctgtggcacaatcacagtttactg-aagcctcaacctcctgggctcaaacgatcttcctgcctgagcctcccaagcagctgggactgcaggt i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47020213 133 + 51301725 tttattgagacagggtctcgctctgtcactcaggctggagtgctgtgacacaatcacagttcactg-aagcctcaacctcctgggctcaaatggtcttcctgcctgagcctcccaagcagctgggactaaaggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46733214 133 + 50890351 tttattgagacagggtctcgctctgtcactcaggctggagtgctgtggcacaatcacagttcactg-aagcctcaacctcgtgggctcaaacgatcttcctgcctaagcctcccaagtagctgggactaaaggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45309374 129 + 49145316 -----tgaaacaaggtctcaccctgtcacccaggctggagtgcagtggtgcaatcacagctcactgaaagcctcaaactcctgggctcaaatgatcttcctgcctcagcctcccaagcagctgggactacaggc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19469382 25 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59881811 0 + 64156825 C a score=478268.000000 s hg38.chr19_GL949747v2_alt 22627 200 + 729520 gcacaccaccacgcctggctaatttttgtattttttgtagagatgggatcttaccaagttgtccaggctggtcttgaacccctgggctcaagtgatcctcctgcctcatcttcccaaagtcctggtattacagacgtgagccactgcgcccggcAAAGATATTTTATTCTGTTTAGAATTGTGATGATACAAATTTGAAC s panTro4.chr19 58959338 198 + 63644993 gcacaccaccacgcctggctaatttttgtattttttgtagagatgggatctcaccaggttgtccaggctagtcttgaacccctgggctcaagtgatcctcctgcctcatcttcccaaagtcctggtatta--gacgtgagccactgcgccgggcAAAGATATTTTATTCTGTTTAGAATTGTGATGATACAAATTTGAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55825787 200 + 60714840 gcacactaccatgcctggctaatttttgtattttttgtagagatgggatctcaccaggttgcccaggctggtcttgaacccctgggcacaagtgatcctcctgcctcatcttcccaaagtcctgggattacagatgtgagccactgcgcccggcAAAGATATTTTATTCTGTTTAGAAtagtgatgatacaaatttgaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102592475 200 - 106955855 gcacaccaccatgcctggctaatttttgtattttttgtagagatgggatctcacccagttgcccaggctggtcttgaacccctgggctcaagtgatcctcctgcctcatcttcccaaagtcctgggattacagacgtgagccactgcgcccggcAAAGATATTTTATTCTGTTTAGAATTGTGATGATACAAATTTGAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59881811 200 + 64156825 gcacaccaccatgcctggctaatttttgtattttttgtagagatgggatctcactaggttgccctggctggtcttgaacccctgggctcaagtgatcctcctgcctcatcttcctgaagtcctgggattacagacgtgagccactgcacccggcAAAGATATTTTATTCTGTTTAGAATTGTGGTGATACAAATTTGAAC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47020346 200 + 51301725 gcacaccaccatgcctggctaattttggtattttttgtagagatggggtctcaccaggttgcccaggctggtcttgaactcctgggctcaagtgatcctcctgcctcatcttcccgaagtcctgggattacagacgtgagccactgcacccggcaaagatattttattctgtttggaaTTGTGATGATACAAATTtgaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46733347 200 + 50890351 gcacaccaccatgcctggctaatttttgtattttttatagagatgggatctcactgggttgccctggctggtcttgaacccctgggctcaagtgatcctcctgcctcatcttcctgaagtcctgggattacagacgtgagccactgcacctggcAAAGAAATTTCATTCTGTTTAGAATTGTGGTGATACAAATTTGAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45309503 200 + 49145316 ccacaccagcatgcctggccaatttttgtgttttttgtagagatgggatcttaccaggttgcccaggctggtcttgaacccctgggctcaagtgatcctcctgcctcatcttcccacagtcctgggattacagacatgagccattgtgcccagccGAGATATTTTATTCTGTTTAGGATTGTGATGATACAAATTTGAAC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19469382 25 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=920567.000000 s hg38.chr19_GL949747v2_alt 22827 323 + 729520 TCAAAAAGTACATTTTAAGAAATTATATA-atacccactgggatggctataattt-aaaaaaagaaaagtaagtgttgacaaggatgtggagatattggaacccacatatattactggaaggaa----tataacatgatacagccacaatgg-aaaatgatttggcagttcctcaaaaagttgaacataatagtcaccatatgtcctagcaaatccacttctaggtacatactcaagataatttacagcgcggagacaaacagatactcctaccacagtgttcc-agcaccattactcgctttagccaagaggtgcagacaacacaaatgt s panTro4.chr19 58959536 323 + 63644993 TCAAAAAGTACATTTTAAGAAATTATATA-atacccactggaatggctataattt-aaaaaaagaaaagtaagtgttgacaaggatgtggagatattgtaacccacatatattactggaaggaa----tataacatgatacagccacaatgg-aaaatgatttggcagttcctcaaaaagttgaacataatagtcaccatatgtcctagcaaatccacttctaggtacatacccaagataatttacagcgcggagacaaacagatactcctaccacagtgttcc-agcaccattactcactttagccaagaggtgcagacaacacaaatgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55825987 323 + 60714840 tcaaaaaatacattttaagaaattatata-atacccactgggatggctataattt-aaaaaaggaaaagtaagtgttgacaaggatgtggagatattggaacccacatatattactggaaggaa----tataacatgatacagccacaatgg-aaaatgatttggcagctcctcaaaaagttgaacataatagtcaccatatgtcctagcaaatccacttctaggtacatacccaagataatttacagcacggagacaaacagatactcctaccacagtgttcc-agcaccattactcactttagctaagaggtacagacaacacaaatgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102592675 323 - 106955855 TCAAAAAATACATTTTAAGAAATTATATA-atacccactgggatggctataattt-aaaaaaagaaaagtaagtgttgacaaggatgtggagatattggaacccacgtatattactggaaggaa----gataacatgatacagccacaatgg-aaaatgatttggcagttcctcaaaaagttgaacataatagtcaccatatgtcctagcaaatccacttctaggtacatacccaagataatttacagtggggaggcaaacagatactcctaccactgtgttcc-agcaccattattcactttagccaagaggtgcagacaacacaaatgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59882011 323 + 64156825 TCAAAAAATAAATTTTAAGAAATTATATA-atacccactgggatggctataattt-aaaaaaagaaaagtaagtgttgacaaggatgtggagatattggaacccacatagattactggaaggaa----tataacatgagacagccataatgg-aaaatgatttggcagttcctcaaaaagttgaacataatagtcaccatatgtcctagcaaatccacttctaggtacatacccaagataatttacagcagggaggcaaacagatactcctaccacaatgttca-agcaccattactcactttagccaagaggtgcagacaacacaaatgt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47020546 323 + 51301725 tcaaaaaataaattttaagaaattatata-atACCCACTGggatggctataattt-aaaaaaagaaaagtaagtgttgacaaggatgtggagatatTGGAACCCACATAGATTACTGGAAGGAA----TATAACATGATACAGCCATAATGG-AAAAtgatttggcagttcctcaaaaagttgaaCATAATAGTCACCATATGTCCTAGCAAATCCACTTCTAGGTACATACCCAAGATAATTTACAGCAGGGAGGCAAACAGATACTCCTACCACAGTGTTCA-AGCACCATTACTCACTTTAGCCAAGAGGTGCagacaacacaaatgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46733547 323 + 50890351 TCAAAAAATAAATTTTAAGAAATTATATA-atacccactgggatggctataattt-aaaaaaagaaaagtaagtgttgacaaggatgtggagatattggaacccacatagattactggaaggaa----tataacatgatacagccataatgg-aaaatgatttggcagttcctcaaaaagttgaacataatagtcaccatatgtcctagcaaatccacttctaggtacatacccaagataatttacagcagggaggcaaacagatactcccaccacagtgttca-agcaccattactcactttagccaagaggtacagacaacacaaatgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45309703 326 + 49145316 TCAaaaactacatttaaagaaattatgta-atacccactgggatggctatcatttaaaaaaaagaaaaggaagtgttgacaaggatgtggagatattggaacccacatatattactggaaggaatgactataacatgatacagccacaatgg-aagacgatttggcagttcctcaaaaagttgaacataatagtcaccatatgtcctagcaattccacttctaggtacatacccaagataatttaaagcggggaggcaaacagatactcctgcca--gtgttca-agcaccattactcactgtagccaagaggtacagagaacacaaatgt i calJac3.chr22 C 0 C 0 s canFam3.chr1 19469407 325 - 122678785 TCAGAAAGTACATCTTCAGAAATTATATAcacacccactaggatgtctataataa-aataaaagggaaataagtgttggcaaggacgtggagatattggaaccctcatgtattactggtgggaa----tgtaaaatgttggggccacattggaaaaacaatttggcagtttctcaaaaagttaaacatag-agttaccatatgtctcagcaattctacttctaggtagatatccaagaaaactggaagcagggactcaaacaggtacttgcacactgatgctcagagcactattacttgccctacctgaaaggtatgaacactctagatgt i canFam3.chr1 I 25 I 12 e macFas5.chr19 54882420 20327 + 59248254 M a score=878187.000000 s hg38.chr19_GL949747v2_alt 23150 438 + 729520 ccatcaaaagaagaacggggccaggcacagtagctcaagtctgtaatcccagcactttgggaagctgaggcgtgtggatcacctgaggtcaggagttcgagaccagcctagccaacatggtgaaaccccctctctactaaaaatacacaaattagctaggcatggtgacgggcgcctgtaggtccagctactcaggaggttaaggcaaaagaatcacttaaacctgggaggcggaggttgcagtgagctgagattgtgccactgcactccagcctgggcgacagagcaagactccgtctcaaaaaaacaa-----aaacaaaaacaaaaa------aaagaatggataagcaa------aatgtggtctatccatacaatacgatgcttttcaccatgacaagaaatgaaacattgatgcatgctacagtacagacaaactttgaaaacattatg s panTro4.chr19 58959859 443 + 63644993 ccatcaaaagaagaatggggccaggcacagtagctcaagtctgtaatcccagcactttgggaagctgaggcgtgtggatcacctgaggtcaggagttcgagaccagcctagccaacatggtgaaaccccctctctactaaaaatacacaaattagctaggcatggtgacgggcgcctgtaggtccagctactcaggaggctgaggcaaaagaatcacttaaacctgggaggcggaggttgcagtgagctgagattgtgccactgcactccagcctgggcgacagagcaagactctgtctcaaaaaaaaaacaaaaaaacaaaaacaaaaa------aaagaatggataagcaa------aatgtggtctatccatacaatacaatgcttttcaccatgacaagaaattaaacattgatgcatgctacagtacggacaaactttgaaaacattatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55826310 449 + 60714840 ccatcaaaagaagaatggggccaggcacagtagctcaagtctgtaatcccagcactttgggaagccgaggcaggtggatcacctgaggtcaggagttcaagaccagcctagccaacatggtgaaaccccctctctactaaaaatacacaaattagctaggcatggtgacgggcacctgtagttccagctactcaggaggctgagacagaagaatcacttgaacctgggaggcggaggttgcagtgagctgagattgtgccactgcactccagcctgggcgacagagcaagactccatctcaaaaaaaaaaaaaaaaaacaaaagaaaaaaacaaagaaagaatggataagcaa------aatgtggtctatccatacaatacgatgcttttcaccatgacaagaaatgaaacattgatgcatgctacagtacggataaactttgaaaacattatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102592998 430 - 106955855 ccatcaaaggaagaatggggccaggcacagtagctcaagtctgtaatcccagcactttgggaagccgaggcgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaactccctctctactaaaaatacacaaattagctgggcatggtgacgggtgcctgtagttccagctactcaggaggctgaggcagaagaatcacttgaacctgggaggcggaggttgcagtgagttgagattgtgccactgcactccagcctgggcaacagagcaagactccatctcaaaaaaaaaa-------------aaaaaaa------aaagaatggataagcaa------aatgtggtctatccatacaatacgatgcttttcaccatgacaagaaatgaaacactgatgcatgctacagtacggataaacttcgaaaacattatg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59882334 425 + 64156825 ccatcaaaagaagaatgaggccaggcgcagtagctcaagtctgtaatcccagcactttgggaagccaaggcaagtggatcacttgaggtcaggagtttgagaccagtctgaccaacatggtgaaaccccttctctact-aaaatacaaaaattagttgggcatggtggcgggcgcctgtagttccagctactcaggaggatgaggcagaagaatcatttgaacctaggaggcggaggttgcagtgagctgagatcatgccactgcactccagcctgggcgacagagcaagactccatctcaaagaaaaaa----------------aaaa------ag-gaatggataagcaa------aatgtggtctgtccatacagtatgatgcttttcaccatgacaagaaatgaaacattgatacatgctatagtatggataaactttgaaaacatcacg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47020869 328 + 51301725 ccatcaaaagaagaatggggccaggcacagtagctcaagtctgtaatcccagcactttgggaagctgaggcaagtggatcacttgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccccttctctactaaaaatacaaaaattagttgggcatggtggcgggcgcctgtagtcccagctactcaagaggatgaggcagaagaatcccttgaacctgggaggcggagcttgcagtgagctgagatccggccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaaaaa----------------aaaa------aa---------------------------------------------------------------------------------------------------------gaaaacatcatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46733870 427 + 50890351 ccatcaaaagaagaatggggccaggcgcagtagctcaagtctgtaatcccagcactttgggaagccgaggcaagtggatcacttgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccccttctctactaaaaatacaaaaatgagttgggcatggtggcgggcgcctgtagttccaactactcaggaggatgaggcagaagaatcacttgaacccgggaggcggaggttgcagtgagctgagatcatgccactgcactccagcctgggcaacagagcaagactccatctcaaagaaaaaa----------------aaaa------aaagaatggataagcaa------aatgtggtctgtccatacagtatgatgcttttcaccatgacaagaaatgaaacattgatacatgctatagtacggataaactttgaaaacatcatg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45310029 431 + 49145316 ccatcaaaaaaagaatggggccaggtgcggtag--cacgcctgtaatctcagcactttgggaggctgaggcaggtggatcacctgcggtcaagagttcaagaccagcctggccaacatggggaaaccccgtctctactaa--------aaattagccaggcatggtggcgcatgcctgtacttccagctactcaggaggctgaggcaggagaacagcctgaatctgggaggaagaggttgcagtgggccgagatcgtgccactgcactgcagcctgagccacagagcaagacttcatctcaaaaaagaaa--------aaaaaaaaaaaa------aaggaatgaataagcaaatgtggaatgtggtctatccatacaatgagatgcttttcaccatgacaggaaatgaaacattgatacatgctacagtacagataaactttgaaagcattatg i calJac3.chr22 C 0 I 288 e canFam3.chr1 19469732 12 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=280190.000000 s hg38.chr19_GL949747v2_alt 23588 130 + 729520 ctaaagagaaagga----------gct--agtcacaaaggatcacatagtgtatgaatccacttacacaaaatgtccagaatagacaaaatcatagacacagagaagcatatgaatggttggaagggcctggtgggaaagtg s panTro4.chr19 58960302 130 + 63644993 ctaaagagaaagga----------gct--agtcacaaaggatcgcatagtgtatgaatccacttacacaaaatgttcagaatagacaaaatcatagacacagagaagcatatgaatggttggaagggcctggtgggaaagtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55826759 142 + 60714840 ctaaagagaaatgctaaacattatgctaaagtcacaaaggatcacatagtgtatgaatccacttacacaaaatgtccagaatagacaaaattatagacacaaagaagcctatgaatggttggaagggcctgatgggaaagtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102593428 130 - 106955855 ctaaagagaaagga----------act--agtcacaaaggatcacatagtgtatgaatccacttacacaaaatgtccagaatagacgaaatcatagacacaaagaggcatatgaatggttggaagggcctggtgggaaagtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59882759 130 + 64156825 ctaaagtgaaagga----------ggt--agtcacaaaggaccacatagtatatgaatccatttacacaaaatgtccagaatagacgaaatcatagacacaaagaagcatatgaatggttggcagggcctggtgggagagtg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47021197 129 + 51301725 cTAAAGTGAAAGGA----------GCT--AGTCACAAAGGACCACATAGTATATTAATCCA-CGacacaaaatgtccagaatagacaaaatcATAGACACAAAGAAGCATATGAATGGttggcagggcctggtgggagagtG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46734297 125 + 50890351 ctaaagtgaaagga----------gct--agtcacaaaggaccac-----atatgaatccacttacacaaaatgtccagaatagacgaaatcatagacacaaagaagtatatgaatggttggcagggcctggtgggagagtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45310748 130 + 49145316 ctaaagcaaaaaga----------gct--agtcagaaagaatcatgtagtgaatgaatccacttacacaaaatgtccagaatagatgaaaccatagacacaaagaagcatattaatggttggcagggtctggcgggagagtg i calJac3.chr22 I 288 C 0 e canFam3.chr1 19469732 12 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=809384.000000 s hg38.chr19_GL949747v2_alt 23718 307 + 729520 ggaaatgaggagtgactgctt---aatgggtacaagattttcttttagggtgatgagaatgttctggaattatgtagtggtgatggttatactacctcatgaagatacaaaatgccagtgaattggacac---tttacaagggtgaatttttggactgtgaattatatatcaataaaAAAAGAAAGAAAATAAATGATACAAGAGCTCAAAATAGAAAAGCTTCTCTTCCTCCTCCC--CCTCACACC-TCACTAGATCTCCCACCTCGTTTCTGATACTTCTGTGTTCCTCTCTCC-CATTAGA-TTTCATATCTTT s panTro4.chr19 58960432 307 + 63644993 ggaaatgaggagtgactgctt---aatgggtacaagattttcttttagggtgatgagaatgttctggaattatgtagtggtgatggttatactacctcattaacatacaaaatgccagtgaattggacac---tttacgagggtgaatttttggactgtgaattatacatcaataaaAAAAGAAAGAAAATAAATGATACAAGAGCTCAAAATAGAAAAGCTTCTCTTCCTCCTCCC--CCTCACACC-TCACTAGATCTCCCACCTTGTTTTTGATACTTCTGTGTTCCTCTCTCC-CATTAGA-TTTCATATCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55826901 306 + 60714840 ggaaatgaggagtgactgctt---aatgggtacaagattttcttttagggtgatgagaatgttctggaattatgtagtggtgatgattatactacct-atgaatatacgaaatgccagtgaattgtatac---tttacaagggtgaatttttggaacgtgaattatatatcaataaaAAAAGAAAGAAAATAAATGATACAAGAGCTCAAAATAGAAAAGCTTCTCTTCCTCCTCCC--CTTCAAACC-TCACTAGATCTCCCACCTTGTTTCTGATACTTCTATGCTCCTCTCTCC-CGTTAGA-TTTCATATCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102593558 310 - 106955855 ggaaatgaggaatgactgctt---aatgggtacaagattttcttttagggtgatgagaatgttctggaattatgtagtggtgatggttatactacctcatgaatatacaaaatgccagtgaattgtatac---tttacaagggtgaatttttggagtgtgaatAATATATTaatagaaaaagaaagaaaataaatgatacaagagctcagaatagaaaagCTTCTCTTCCTCCTCCT--CCTAACACCTTCACTAGATCTCCCACCTTGTTTCTGACACTTCTGTGTTCCTCTCTCCTTGTTAGATTTTCCTATCTTT i nomLeu3.chr10 C 0 M 100 s rheMac3.chr19 59882889 307 + 64156825 ggaaatgaggagtgactgctt---aatgggtacaagattttctttcagggtgatgagaatggtctggaattatgtagtggtgatggttatactaccttgtgaatatacaaaatgccagtgaattgcacac---tttacaagggtgaatttttggaatgtgaattatatatcaataaaAAAAGAAGGAAAATAAATGACACAAGAGCTCAAAATAGAAAAGTTTCTCTTCCTCCTCCC--CCTCACACC-TCACTAGATCTCCCACCTCCTTTCTGATACTTGTGTGTTCCTCTCTCC-CATTAGA-TTTCATATCTTT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47021326 307 + 51301725 GGAAATGaagagtgactgctt---aatgggtacaagATTTTCTTTCAGGGTGATGAGAATGGTCTGGAATTAtgtagtggtgatggttatactACCTTGTGAATATACAAAATGCCAGTGAATTGCACAC---TTCACAAGGGTGAATTTTTGGAatgtgaattatatatcaataaaaaaagaaggaaaataaatgacacaAGAGCTCAAAATAGAAaagtttctcttcctcctccc--cctcacaCC-TCACTAGATCTCCCACCTCCTTTCTGATACTTCTGTATTCCTCTCTCC-CGTTAGA-TTTCACATCTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46734422 300 + 50890351 ggaaat---gagtgactgctt---aatgggtacaagattttctttcagggtgatgagaatggtctggaattatgtagtggtgatggttatactaccttgtgaatatacaaaatgccagtgaattgtacac---tttacaagggtgaatttttggaatgcgaattatatatcaataaaAAAA----GAAAATAAATGACACAAGAACTCAAAATAGAAAAGTTTCTCTTCCTCCTCCC--CCTCACACC-TCACTAGATCTCCCACCTCCTTTCTGATACTTCTGTGTTCCTCTCTCC-CATTAGA-TTTCATATCTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45310878 309 + 49145316 ggaaatggggagtgactgcttctcagtgggtacaagatttcattttagggtgatgaggatgttctggaattatgtggtggtgatggttatactacctcgtgaatatccg-aatgctagtgaattgtacac---tttacaagggtgaatttttggaatgtgaattatatatccataaaAAAAGAAAGAAAACAAAAGATACAAGAGCTCAAAATAGAAAAACTTCTCTTTCTCCTCCC--TCTTACACC-TCACTAGATCTCCCTCCTTATTTCTGATAATTCCATGTTTCTCTCTTC-TGTTAGA-CTTCGTGTCTTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19469744 310 - 122678785 gggaatggggagaaactactt---acagggtaggagatttcatttgggggtgataaaagtgttctggaattacatagtggtgacagttgcataaacttgtt-atatactaaatgccactgaattgtacacttatttaaaagggtaaatttatggaatgtgaattatgagtcaata-aaAAAGAAAGAAAATAAATAATGCAAGAGCTAAAAACATGAATGCACTTCTTCCTCTTCCCTGTCTCACACA-GCACTAGACTTCCTGCCTTATTTCAGATACGTCCATGCTCCTTGACTC-TGTCAGA-TTTCAGGTCTCT i canFam3.chr1 I 12 C 0 e macFas5.chr19 54882420 20327 + 59248254 M a score=426973.000000 s hg38.chr19_GL949747v2_alt 24025 212 + 729520 CTCAGAAAACGTTCCTGACGTGAATTGTGTTCGTAGTGCTAGGGTAGCAGACATTTCCCAAGCCTACTATCATGGAATAAAAACGTTTCAAA-------TAGTTATCTTGCAAGAACACTTTGGAGGATACCTTTTTGAAAACCGATTATACCAGCACAGACTGCTAGCAACAACCTTCAGCAACTTTGGCTCTTTGGAGTAGGTTGCAGGAAGATTAT s panTro4.chr19 58960739 212 + 63644993 CTTAGAAAACGTTCCTGACGTGAATTGTGTTCGTAGTGCTAGGGTAGCAGACATTTCCCAAGCCTACTATCATGGAATAAAAACGTTTCAAA-------TAGTTATCTTGCAAGAACACTTTGGAGGATACCTTTTTAAAAACCGATTATACCAGCACAGACTGCTAGCAACAACCTTCAGCAACTTTGGCTCTTTGGAGTAGGTTGCAGGAAGATTAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827207 212 + 60714840 CTTAGAAAACGTTCCTGACGTGAATTGTGTTCATAGTGCTGGGGTAGCAGTCATTTCCCAAGCCTACTATCATGGAATAAAAACGTTTCAAG-------TAGTTATCTTGCAAGAACACTTTGGAGGATACCTTTTTAAAAACCGGTTATACCAGCACAGACTGCTAGCAACAACCTTCAGCAACTTTGGCTCTTTGGAGTAGGTTGCAGGAAGATTAT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59883196 211 + 64156825 CTTAGAAAACATTCCTGACGTG-ATTGTGTTCACAGTCCTAGGGTAGCAGTCATTTCCCAAGCCTAGTATCATGGAATAAAAACATTTCAAA-------TAGTTATCTTGCAAGAACACTTTGGAAGATACCTTTTCAAAAACCGATTATACCAGCACAGACTGCTAGCAACAACTTTCAGCAACTTTGGCTCTTTGGAGTAGGTTGCAGGAAGATTGT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47021633 212 + 51301725 CTTAGAAAACGTTCCTGACGTGAATTGTGTTCACAGTCCTAGGGTAGCAGTCATTTCCCAAGCCTACTATCAtggaataaaaacatttcaaa-------tagttATCTTGCAAGAACACTTCGGAGGATACCTTTTCAAAAACCGATTATACCAGCACAGACTGCTAGCAACAACTTTCAGCAACTTTGGCTCTTTGGAGTAGGTTGCAGGAAGATTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46734722 212 + 50890351 CTTAGAAAACGTTCCTGATGTGAATTGTGTTCACAGTGCTAGGGTAGCAGTCATTTCCCAAGCCTACTATCATGGAATAAAAACGTTTCAAA-------TAGTTATCTTGCAAGAACACTTTGGAGGATACCTTTTCAAAAACCGATTATACCAGCACAGACTGCTAGCAACAACTTTCAGCAAATTTGGCTCTTCGGAGTAGGTTGCAGGAAGATTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45311187 194 + 49145316 CTTAGAAAATGTTCCTGGCATGAATTGTGTTCATAGTGCTA-GGTAGTAGTCACTTTCCAAACCTACTATCATGGAATAAAAACGTTTCAAG-------TAG-----------------TTTGGAGGATACCTTTTTAAAACCCAATTATACCAGCACAGACTGCTAACAGCAACCTTCAGCAACTTCGGCTCTTTGGAGTAGGTTGTAGGAACATTAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19470054 201 - 122678785 CCAAGAAAACATTCCTGGTGTGAATTATGTTCATAAAGGTGAAGTAGAAATCATTTCCCAAGTCTGCTAATACTGAATAAAAACATTTTCAAAGGCTATTACTTATTTTGCAAGGACATTTTGGGAGATACCTTTGAAAAAA------------------ACTGGTTATGACAGCCTTGAACAATTTTGGCTCTTTGGAGTGGATTACAGGGAGGTTAT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102593868 100 - 106955855 M e macFas5.chr19 54882420 20327 + 59248254 M a score=331149.000000 s hg38.chr19_GL949747v2_alt 24237 114 + 729520 GACTTGCTGAAAGGAAGGATGATTAAGCATCTAGATGCCAATTTATATTCTGCATTTGGCCCTTAAAGTCTGGATGAGTTCCTGTTTCAGCCGAATGCTGCCAAAAGCTCTAAC s panTro4.chr19 58960951 114 + 63644993 GACTTGCTGAAAGGAAGGATGATTAAGCATCTAGATGCCAATTTATATTCTGCATTTGGCCCTTAAAGTCTGGATGAGCTCCTGTTTCAGCCGAATGCTGCCAAAAGCTCTAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827419 114 + 60714840 GACCTGCTGAAAGGAAGGATGATTAAGCATCTAGATGCCAATTTATATTCTGCATTTGGCCCTTAAAGTCTGGATGAGCTCCTGTTTCAGCCGAATGCTGCCAAAAGCTCTAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102593972 112 - 106955855 GACTTGCTGAAAGGAAGGATGA-TAAGCATCTAGATGCCAATTTATATTCTGCATTTGG-CCTTAAAGTCTGGATGAGCTCCTGTTTCAGCCAAATGCTGCCAAAAGCTCTAAC i nomLeu3.chr10 M 100 C 0 s rheMac3.chr19 59883407 114 + 64156825 GACTTGCTGAAAGGAAGGATGATTAAGCATCTAGATGCCAATTTATATTCTGAATTTGGCCCTTAAAGTCTGGATGAGCTTCTGTTTCAGCCGAATGCTGCCAAAAGCTCTAAC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47021845 114 + 51301725 GACTTGCTGAAAGGAAGGATGATTAAGCATCTAGATGCCAATTTATATTCTGAATTTGGCCCTTAAAGTCTGGATGAGCTTCTGTTTCAGCCGAATGCTGCCAAAAgctctaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46734934 114 + 50890351 GACTTGCTGAAAGGAAGGATGATTAAGCATCTAGATGCCAATTTATATTCTGAATTTGGCCCTTAAAGTCTGGATGAGCTTCTGTTTCAGCTGAATGCTGCCAAAAGCTCTAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45311381 114 + 49145316 GACTTGCTGAAAGGAAGGATGATTAAGCATCTAGATGGCAATTTATATTCTGCATTTGGCCCTTAAAGTCTGGATGAGCTCCTGTTTCAGCCGAATACTGCCGAAATCCTTAAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19470255 114 - 122678785 GAGTTGCAGAAATTAAGGATGAGTAAGCAACTAGATGCCAACTTATGTTATATATTTGGCCATTAAAATCTGGATGAGCTCCCATTTTCATCCAAAGATGCCAAAAGCTCTAAA i canFam3.chr1 C 0 C 0 e macFas5.chr19 54882420 20327 + 59248254 M a score=37319.000000 s hg38.chr19_GL949747v2_alt 24351 31 + 729520 -tttttaatttttttttttttttttttttttt s panTro4.chr19 58961065 26 + 63644993 -ttttt-----ttatttatttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827533 26 + 60714840 -ttttt-----ttaatttttttttttcttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594084 26 - 106955855 -ttttt-----ttaatttttttttttcttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883521 27 + 64156825 tttttt-----ttaattttttttttttttttt i rheMac3.chr19 C 0 I 132 s papAnu2.chr19 47021959 27 + 51301725 tttttt-----ttaattttttttttttttttt i papAnu2.chr19 C 0 I 7 s chlSab2.chr6 46735048 22 + 50890351 -----T-----TTAAttttttttttttttttt i chlSab2.chr6 C 0 I 6 s calJac3.chr22 45311495 23 + 49145316 -TTAAA-----AAAAtttttttttttttt--- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470369 0 - 122678785 C e macFas5.chr19 54882420 20327 + 59248254 M a score=193738.000000 s hg38.chr19_GL949747v2_alt 24382 151 + 729520 g-----gagacagagtctcactctgttgcccaggctggagggcagtggtgtaatctcggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagtcacttgagtagctgggaatacaggcgcccaccacaatgcccagcaaat s panTro4.chr19 58961091 151 + 63644993 g-----gagacagagtctcactctgttgcccaggctggagggcagtggtgtaatctcggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagtcacttgagtagctgggaatacaggcgcccaccataatgcccagcaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827559 151 + 60714840 g-----gagacagagtctcactctgttgcccaggctggagtgcagtggtataatctcgactcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagtcacttgagtagctgggaatacaggcgcccaccacaatgcctggcaaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594110 151 - 106955855 g-----gagacagagtctcactctgttgcccagactggagtgcagtggtgtaatctcagctcactgaaacctctgcctcccaggttcaagcaattctcctgcctcagtcacttgagtagctgggaatacaggcacccaccacaatgcccggcaaag i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47021993 121 + 51301725 -tttttgagacagagtctca----------------------------------ctcggctcactgcaacctctacctcccaggttcaagcaattctcctgcttcagtcacttgagtagctgggagtacaggcgcccaccacaatgcctggcaaat i papAnu2.chr19 I 7 C 0 s chlSab2.chr6 46735076 116 + 50890351 ------gagacagagtctta----------------------------------ctcggctggctgcaacctctacctcccaggttcaagcaattctcctgcttcagtcacttgagtagctaggaatacaggcgcccaccacaatgcctggcaaat i chlSab2.chr6 I 6 C 0 s calJac3.chr22 45311518 132 + 49145316 -------agagacaatctcactctgttgcccaggctggagggcagtggtgccatctcagctcactgcaacctccacctcccagattca---aattctcctgcctcagcctcctgagtagctgggattacag----------taatggct---aaa- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470369 0 - 122678785 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59883548 132 + 64156825 I a score=276355.000000 s hg38.chr19_GL949747v2_alt 24533 127 + 729520 ttttgtatttttagtagagacagggtttcaccatgttgcccaggctggtttcgaactcctgacctcaggtgatccgcccacctcggcctcccaaagtgctgggattacagatgtgagccacctcgcc s panTro4.chr19 58961242 127 + 63644993 ttttgtatttttagtagagacagggtttcaccatgttgcccaggctggtttcgaactcctgacctcaggtgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgagccacctcgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827710 127 + 60714840 ttttgtatttttagtagagacagggtttcaccatcttgcccaggctggtctcgaactcctgacctcaggtgatccacccacctcagccgcccaaagtgctgggattacaggcgtgagccacctcgcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594261 98 - 106955855 ttttgtatttttagtagagac-----------------------------tcgaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgggaatacaggtgtgagccacctcgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883680 127 + 64156825 ttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatctgcccacctcggcctcccaaagtgctgggattataggcgtgagccaccgcacc i rheMac3.chr19 I 132 C 0 s papAnu2.chr19 47022114 127 + 51301725 ttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcgaactcctgacctcaggttatctgcccacctcggcctcccaaagtgctgggattataggcgtgagccacctcacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46735192 127 + 50890351 ttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatctgcccacctcggcctcccaaagtgctgggattacaggcgtgagccacctcgcc i chlSab2.chr6 C 0 I 352 s calJac3.chr22 45311650 127 + 49145316 ttttgaatgtttagtagagatggggtttcaccatgttgaccaggctcgtctcaaactcctgacctcaagtgatccgcccgccttggcctccaaaagtgctgggattacacgcgtgagccactgcgcc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470369 0 - 122678785 C e macFas5.chr19 54882420 20327 + 59248254 M a score=23961.000000 s hg38.chr19_GL949747v2_alt 24660 18 + 729520 tggccCAAAAGCTCTAAT s panTro4.chr19 58961369 18 + 63644993 tggccCAAAAGCTCTAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827837 18 + 60714840 tggccCCAAAGCTCTAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594359 18 - 106955855 tggccCAAAAGCTCTAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883807 14 + 64156825 ----TCGGGAGCTCTAAT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022241 14 + 51301725 ----tcgGGAGCTCTAAT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45311777 18 + 49145316 cggccCAAAAGCTCTAAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470369 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=90187.000000 s hg38.chr19_GL949747v2_alt 24678 40 + 729520 TTTTATGAGAAACTCTGAGGACAGAATCTTAGTCAATTGT s panTro4.chr19 58961387 40 + 63644993 TTTTATGAGAAACTCTGAGGACAGAATCTTAGTCAATTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827855 40 + 60714840 TTTTATGAGAACCTCTGAGGACAGAATCTTAGTCAATTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594377 40 - 106955855 TTTTATGAGAACCTCTGAGGACAGAATCTTAGTCAATTGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883821 40 + 64156825 TTTTATGAGAACCTCTGAGGACAGAATCTTAGTCAATTGT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022255 40 + 51301725 TTTTATGAGAACCTCTGAGGACAGAATCTTAGTCAATTGT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45311795 40 + 49145316 TTTTATGACAACCTCTGAGGACAGAGTCTTAGTCAAttgt i calJac3.chr22 C 0 I 299 s canFam3.chr1 19470369 40 - 122678785 TTTTACAAGCATCTCCCAGGATAGAATCTTAGTCAATTCC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=77243.000000 s hg38.chr19_GL949747v2_alt 24718 43 + 729520 TAATGAATAAGCAACATTA-GAAAAA-AAATTCAATATTCACCTA s panTro4.chr19 58961427 43 + 63644993 TAATGAATAAGCAACATTA-GAAAAA-AAACTCAATTTTCACCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827895 44 + 60714840 TAATGAATAATCAACATTAGGAAAAA-AAATTCAATATTCACCTA i ponAbe2.chr19 C 0 I 35 s nomLeu3.chr10 102594417 44 - 106955855 TAATGAATAAGCAACATTAGGGGAAA-AAATTCAATATTCACCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883861 44 + 64156825 TAATGAATAAGCAACATTAGGGGGAA-AAATTCAATATTCACCTA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022295 44 + 51301725 TAATGAATAAGCAATATTAGGGGAAA-AAATTCAATATTCACCTA i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45312134 45 + 49145316 TAATGAATAAGCAACATCAGGAAAAATGCATTCAATATTCACCCT i calJac3.chr22 I 299 I 1 s canFam3.chr1 19470409 44 - 122678785 TCATTGAAAAGCAACACCAGAGAAAA-TAACTTAATATTCACCAG i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=18731.000000 s hg38.chr19_GL949747v2_alt 24761 13 + 729520 TTTTTGAGAATTT s panTro4.chr19 58961470 13 + 63644993 TTTTTGAGAATTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102594461 13 - 106955855 TGTTTGAGAATTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883905 13 + 64156825 TGGTTGAGAATTT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022339 13 + 51301725 TGGTTGAGAATTT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45312180 13 + 49145316 TTTTTGAGAATTT i calJac3.chr22 I 1 I 422 s canFam3.chr1 19470453 13 - 122678785 TTTTTTAGAACTT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55827939 35 + 60714840 I e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=12195.000000 s hg38.chr19_GL949747v2_alt 24774 10 + 729520 TAGAGTTATA s panTro4.chr19 58961483 10 + 63644993 TAGAGTTATA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102594474 10 - 106955855 TAGAGTTATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883918 10 + 64156825 TAGAGTTATA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022352 10 + 51301725 TAGAGTTATA i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19470466 10 - 122678785 TAAAGTTTTA i canFam3.chr1 C 0 I 1 e ponAbe2.chr19 55827939 35 + 60714840 I e calJac3.chr22 45312193 422 + 49145316 I e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=910.000000 s hg38.chr19_GL949747v2_alt 24784 1 + 729520 A s panTro4.chr19 58961493 1 + 63644993 A i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102594484 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883928 1 + 64156825 A i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022362 1 + 51301725 A i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19470476 1 - 122678785 I e ponAbe2.chr19 55827939 35 + 60714840 I e calJac3.chr22 45312193 422 + 49145316 I e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=196807.000000 s hg38.chr19_GL949747v2_alt 24785 193 + 729520 CAAACTCTTGATTATATATATTCCTGAAGTACCTACTCTGCGTAGGT-CCT------GGTCCTACTCCCCAAATGGGTCACTGAAAAATTCACCCCCATTATTCCCCAAATCCCACCCTAGTTTTTCATCATGTCATATGGCAAACAACGCACTCTGTGCTGTTTTACACACCAGCTTCTTCAGAACCCGGAAGCACTTT s panTro4.chr19 58961494 193 + 63644993 CAAACTCTTGATTATATATATTCCCGAAGTACCTACTCTGCATAGGT-CCT------GGTCCTACTCCCCAAATGGGTCACTGAAAAATTCACCCCCATTATTCCCCAAATCCCACCCTAGTTTTTCATCATGTCATATGGCAAACAACGCACTCTGTGCTGTTTTACACACCAGCTTCTTCAGAACCCGGAAGCACTTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102594485 194 - 106955855 CAAACTCTTGATTATACATATTCCCAAAGTAGCTACTCTGCGTAGGTCCCC------GGTCCTACTCCCCAAATGGGTCACCCAAAAATTCACCCCCATTATTCCCCAAATCCCACCCTAATTTTTCATCATGTCATATGGCAAACAACGCCCTCTGTGCTGTTTTACACACCAGCTTCTTCAGAACCCAGAAGCACTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883929 191 + 64156825 CAAACTCTTGATTATACATATTCCTGAAGTACCTACTCTGCGTAGGT-CCT------GGTCCTACTCCCCAAATGGGTCACCCAAAAATTCACCCCCATTATTCCCCAAATCCCACCCTAGTTTTTCATCACGTAATATGGCAAACAACGCACTC--TGCTGTTTTACACACCAACTTCTTCAGAAACTGGAAGCACTTG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022363 193 + 51301725 CAAACTCTTGATTATACATATTCCTGAAGTACCTACTCTGCGTAGGT-CCT------GGTCCTACTCCCCAAATGGGTCACCCAAAAATTCACCCCCATTATTCCCCAAATCCCACCCTAGTTTTTCATCACGTAATATGGCAAACGATGCACTCTGTGCTGTTTTACACGCCAACTTCTTCAGAAACCGGAAGCACTTG i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19470477 194 - 122678785 CACATTCTTGATCAGACACATTCCCAAAGCACCTGGGCTCCATGGCT-CCTCCATGGGGT----CTGCCCAAACCAGACAAC-ACAATCTCATCCCCATTCTTCACAAAACTCCACCATCGTTTTTCATTATGTAAAATGATAAATGACGCATCTGTAGCTGTTTTACTCATCAGCTTTTCCTGAACCCAGGAGGAGCTT i canFam3.chr1 I 1 C 0 e ponAbe2.chr19 55827939 35 + 60714840 I e calJac3.chr22 45312193 422 + 49145316 I e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=26254.000000 s hg38.chr19_GL949747v2_alt 24978 28 + 729520 AGAGGTTATCTCCCCTCATCCTCCACCC s panTro4.chr19 58961687 28 + 63644993 AGAGGTTATCTCCCCTCATCCTCCACCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102594679 28 - 106955855 AGAGGTTATCTCCCCTCATCCCCCACCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884120 28 + 64156825 AGAGGTTATCTCCCCTCATGCCCCACCC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022556 28 + 51301725 AGAGGTTATCTCCCCTCATGCCCTACCC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45312615 20 + 49145316 agaaGTTACCTCCC--------CAACCC i calJac3.chr22 I 422 C 0 s canFam3.chr1 19470671 12 - 122678785 AGCGGTCATCTG---------------- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55827939 35 + 60714840 I e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=90076.000000 s hg38.chr19_GL949747v2_alt 25006 46 + 729520 CCCAAAACACAGCAGTTTCCCCAATAACATTGAGAAAATGGGCTTT s panTro4.chr19 58961715 46 + 63644993 CGCAAAACACAGCAGTTTCCCCAATAACATTGAGAAAATGGGCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827974 46 + 60714840 CCCAAAACCCAGCAGTTTCCCCAATAACATTGAGAAAATGGGCATT i ponAbe2.chr19 I 35 C 0 s nomLeu3.chr10 102594707 45 - 106955855 -TCAAAACACAGCAGTTTCCCCAATAACATTGAGAAAATGGGCATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884148 46 + 64156825 CCGAAAACACAGCAGTTTCCCCAATAACATTGAGAAAATGGCCATT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022584 44 + 51301725 CCGAAA--ACAGCAGTTTCCCCAATAACATTGAGAAAATGGCCATT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45312635 46 + 49145316 CCCAAAACACAGCAGTTTCCCCAATAACATTGAGAAAGTGGGCATT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19470683 46 - 122678785 CCAGAAAGGCAGTCATTCTCCCAATCACATTGAAAAAACAGGCATC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=241347.000000 s hg38.chr19_GL949747v2_alt 25052 137 + 729520 AAAG---TTCTTCTAggccgggtgcggtggctcatgcctgtaatcccaacactttgagaggccgaggcgggggaattgcttgaggtcaggagtttgataccagcctggccaacatggtgaaaccccatctctactaaaaa s panTro4.chr19 58961761 137 + 63644993 AAAG---TTCTTCTAggccgggtgcggtggctcacgcctgtaatcccaacactttgagaggccgaggcggggaaattgcttgaggtcaggagtttgataccagcctggccaacatggtgaaaccccatctctactaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828020 137 + 60714840 AAAG---TTTTTTTAggccgggtgcggtggctcacgcctgtaatcccagcactttgagaggccgaggagggggaattgcttgaggtcaggagtttgataccagcctggccaacatggtgaaaccccatctctactaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594752 140 - 106955855 AAAGTTCTTCTTCTAggccgggtgtggtggctcacgcctgtaatcccaacactttgagaggccgaggcaggggaattgcttgaggtcaggagtttgataccagcctggccaacatggtgaaaccccatctctactaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884194 140 + 64156825 AAAGTTCTTCTTGTAggccgggtgcggtggctcacacctgtaatcccaacattttgagaggccaaggcaggggaattgcttgaggtcaggagtttgataccagcctggccaacatggtgaaactccatctctactaaaaa i rheMac3.chr19 C 0 M 85 s papAnu2.chr19 47022628 140 + 51301725 AAAGTTCTTcttgtaggccgggtgcggtggctcacacctgtaaccccaacattttgagaggccaaggcaggggaattgcttgaggtcaggagtttgataccagcctggccaacatggtgaaactccatctctacttaaaa i papAnu2.chr19 C 0 I 4 s calJac3.chr22 45312681 140 + 49145316 AAAGTTCTTCTTGTGggccgggtgcagtggcttgcgcccataatcccaacgcttttagaggctgaggtgggggaattggttgaggtcaggagattgataccagcctggccaacatggtgaaaccctgtctttactaaaaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470729 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=-1219.000000 s hg38.chr19_GL949747v2_alt 25189 13 + 729520 caaaaaac------------------------------------------------------------aaaaa- s panTro4.chr19 58961898 13 + 63644993 caaaaaac------------------------------------------------------------aaaaa- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828157 13 + 60714840 caaaaaac------------------------------------------------------------aaaaa- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594892 12 - 106955855 caaaaaa-------------------------------------------------------------aaaaa- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47022772 73 + 51301725 aaaaaaatgagctgggtttagtggtgggttcctgtaatcccagttattcaggaggaatatctctactaaaaat- i papAnu2.chr19 I 4 C 0 s calJac3.chr22 45312821 13 + 49145316 -aaaaaaa------------------------------------------------------------aAAAAA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470729 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59884334 85 + 64156825 M a score=135799.000000 s hg38.chr19_GL949747v2_alt 25202 175 + 729520 acaaaactgagctggatatggtggtgggtgcctgtaatcccagctattcgggaggccgaggcaggagaattgcttgaacccagaacccaggaagtggaggttgcagtgagctgagattgtgccacttcacgccaccctgggggacagaacaagactctttctcaaaa-aaataaaT s panTro4.chr19 58961911 175 + 63644993 acaaaactgagctggatatggtggtggatgcctgtaatcccagctattcgggaggccgaggcaggagaattgcttgaacccagaacccaggaagtggaggttgcagtgagctgagattgtgccacttcacgccaccctgggggacagaacaagactctttctcaaaa-aaataaaT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828170 175 + 60714840 acgaaactgagctggatatggtggtgggtgcctgtaatcccagctattcgggaggccaaggcaggagaattgcttgaacccagaacccaggaagtggaggttgcagtgagctgagattgcgccacttcatgccagcctgggggacagaacaagagtctgtctcaaaa-aaataaaT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594904 173 - 106955855 acaaaactgagctggatatggtggtgggtgcctgtaatcccagctattcgggaggccgaggcaggagaattgcttgaacccagaacccaggaagtggaggttgcagtgagctgagattgtgccacttcacgccagcctgggggacagaacgaga--ctgtctcaaaa-aaataaaT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47022845 169 + 51301725 acaaaaattagctgggcatggtggtgtgtgcctgtagtcccagctactcgggaggctaaggcaggagaatcgcct-------gaacccgggaggcaaaggttgcagtgagcaaaggtcgcaccactacactccagcctgggcgacagagcgagactccgtctcaaaataaataaat i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19470729 0 - 122678785 C e calJac3.chr22 45312834 0 + 49145316 C e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59884334 85 + 64156825 M a score=1365.000000 s hg38.chr19_GL949747v2_alt 25377 1 + 729520 A s panTro4.chr19 58962086 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828345 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595077 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47023014 1 + 51301725 a i papAnu2.chr19 C 0 I 502 s calJac3.chr22 45312834 1 + 49145316 A i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470729 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59884334 85 + 64156825 M a score=165198.000000 s hg38.chr19_GL949747v2_alt 25378 229 + 729520 ggccgtgtgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggcagatcac--aaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggtgcgtgcctgtagtcccagctattcgggaggctgaggcaggaaaattgcttgaatc-------cgggaggcgaaggttgcagtgagct s panTro4.chr19 58962087 229 + 63644993 ggccgggtgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggcagatcac--aaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctaccaaaaatacaaaaattagctgggtgtggtggcgcgtgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaatc-------cgggaggcgaaggttgcagtgagct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828346 229 + 60714840 ggccgggtgcggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcagatcac--gaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggtgtggtcccacatgcctgtagtcccagctactccggaggctgaggcaggagaattgcttgaatc-------cgggaggcgaagtttgcagtgagct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595078 229 - 106955855 ggccgggtgcagtggctcacacctgtattcccagcactttgggaggctgaggtgggcagatcac--gaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggtgtggtggcacacacctgtagtcccagctacttgggaggctgagtcaggagaattgcttgaacc-------tgggaggcgaaggttgcagtgagct i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45312835 228 + 49145316 ATccaggtatagtggctcatgcctgtaattccagc-cttcaagaggattc-----ccaaatcaccagaggttggga-ttcaagaccaccctgagcaacatggagaaaccccatctctattaaaaatac-aaaattaaccaggcagggtggtgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacccagaacacagaaggcggaggttgtagtgag-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470729 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59884334 85 + 64156825 M a score=51799.000000 s hg38.chr19_GL949747v2_alt 25607 46 + 729520 gagattgcgccactgtactccagccttggtgacaaagcgagactct s panTro4.chr19 58962316 46 + 63644993 gagattgcgccactgtactccagccttggtgacaaagtgagactct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828575 46 + 60714840 gagattgtgccactgtactccagcctgggtgacaaagcgagaccct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595307 46 - 106955855 gagattgcaccactgcactccagcctgggtgacaaagcgagactct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884420 46 + 64156825 gagactgcaccactgcactccagcctgggtgacagagcgagtctcc i rheMac3.chr19 M 85 C 0 s calJac3.chr22 45313063 43 + 49145316 ---atcatgccacttcactccagcctgggtgacagagcgagactcn i calJac3.chr22 C 0 I 10 e canFam3.chr1 19470729 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=18590.000000 s hg38.chr19_GL949747v2_alt 25653 28 + 729520 atctcaaaaaacaaacaaacaaacaaac s panTro4.chr19 58962362 28 + 63644993 atctcaaaaaacaaacaaataaataaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828621 28 + 60714840 atctcgaaaaataaacaaacaaacaaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595353 28 - 106955855 atctcaaaaaacaaacaaacaaataaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884466 24 + 64156825 atctcaaaaaataaataaataaat---- i rheMac3.chr19 C 0 C 0 e canFam3.chr1 19470729 0 - 122678785 C e calJac3.chr22 45313106 10 + 49145316 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=6156.000000 s hg38.chr19_GL949747v2_alt 25681 12 + 729520 aaacaaa-TAAA------T s panTro4.chr19 58962390 14 + 63644993 aaataaa-taaa----aat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828649 18 + 60714840 aaataaa-TAAATAAAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595381 14 - 106955855 aaataaa-TAAA----AAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884490 9 + 64156825 -----aa-taaa----aat i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45313116 15 + 49145316 aaTTAAATTCAA----AAT i calJac3.chr22 I 10 C 0 e canFam3.chr1 19470729 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=404591.000000 s hg38.chr19_GL949747v2_alt 25693 305 + 729520 AAAGTTCTCCTTGTGCACTTT-AAGCAAA-GGTGA---------TCATGAAGCAGATCTCATTGGGAAAAACATCTCCTTTCTAATTATCTTA-CCTGTTTTCATTGAGGGAGCTT-CAAGTTCATCGTGTTTATCTAGAAAATAGGAGGGAAGAAAAGG-AATTACACTAATCATACAG-GAACCTTGGGGACAGGAGTCCTCACGTCCTACTTATAGACATCCTGTTCTTCTTTGGGAAGCAGAAAAGAGAATGGCTTCTCCATTCCCTAGATGCTCCCTGGGTCCTCAGAGCATGGACAGAGCCTCAGATT-ACTCTT s panTro4.chr19 58962404 305 + 63644993 aaaGTTCTCCTTGTGCACTTT-AAGCAAA-GGTGA---------TCATGAAGCAGATCTCATTGGGAAAAACATCTCCTTTCTAATTATCTTA-CCTGTTTTCATTGAGGGAGCTT-CAAGTTCATCGTGTTTATCTAGAAAATAGGAGGGAAGAAAAGG-AATTACACTAATCATACAG-GAACCTTGGGGACAGGAGTCCTCACGTCCTACTTATAGACTTCCTGTTCTTCTTTGGGAAGCAGAAAAGAGAATGGCTTCTCCATTCCCTAGATGCTCCCTGGGTCCTCAGAGCATGGACAGAGCCTCAGATT-ACTCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828667 301 + 60714840 AAAGTTCTCCTTGTGCACTTT-AAGCAAA-GGTGA---------TCATGAAGCAGATCTCATTGGGAAACACAT---CTTTCTAATTATCTTA-CCTGTTTTCATTGAGGGAGCTT-CAAGTTCATCGTGTTTATCTAGAAAATAGGAGGGAAGAAAAGG-AATTACACTAATCATACAG-GAACCTTGGGGACAGGAGTCCTCACGTCCTACTTACAGACTTCCTG-TCTTCTTTGGGAAGCAGAAAAGAGAATGGCTTCTCCATTCCCTAGATGCTCCCTGGGTCCTCAGAGCATGGACAGAGCCTCAGATT-ACTCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595395 313 - 106955855 AAATTTCTCCTTGTGCACTTT-AAGCAAA-GGTGATCCCCCATCTCATGAAGCAGATCTAATTGGGAAAAACATCTCCTTCCTAATTCTCTTA-CCTGTTTTCATTGAGGGAGCTT-CAAGTTCATCGTGTTTATCTAGAAAATAGGAGGGAAGAAAAGG-AATTACGCTAATCATACAG-GAACCTTGGGGACAGGAGTCCTCACGTCCTACTTATAGACTTCCTG-TCTTCTTTGGGAAGCAGAAAAGAGAATGGCTTCTCCATTCCCTAGATGCTCCCTGGGTCCTCAGAGCATGGACAGAGCCTCAGATT-ACTCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884499 311 + 64156825 aaAGTACTCC-TGTGCACTTT-AAGCAAA-GGTGATCCAGCGTCTTATGAAGCAGATCTAATTGGAAAAAA-ATCTCCTTTCTAATTATCTTA-CCTGTTTTCATTGAGGGAGCTT-CAAGTTCATCGTGTTTATCTAGAAAATAGGAGGGAAGAAAAGG-AATTATGCTAATCACATAG-GAACCTTGGGGGCAGGAGTCCTCTCGTCCTACTTACAGACTTCCTG-TCTTCTTTGGGAAGCAGAAAAGAGAATGGCTTCTCCATTCCCTAGGTGCTTCCTGAGTCCTCAGAGCATGGACAGAGCCTCAGATT-ACTCTT i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45313131 313 + 49145316 AAAGTCGTCGTGTCCCACCTTAAAGTAAATGGCGATCCTTGTACTTATGCAGCAGATCTAATCGGGAAATACAACTCCTTTCTAATCATCTTACCCTGTTTTCATCGAGGGAGCTTCCAATTTCATCGTGTTTATCTGGAAAACGGAAGGGAAGACAAGG-AATGAGGCTAATCATATGG-GACCATTGTGGGCAGGCGTCCTCACGTCCTCCTTACTGACTTCCTG-CCCTGTTTGGGAAGCAGAAAAGA-----GTTTCTCCATTCCCTAGATGCTCCCTGGGTCCTCAGACCGGGGACAGAGCCTCAGATTAACTCTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19470729 307 - 122678785 AAGATTCCTTCTGTGCCTTTT-AATCACA-GGGGACTGCCTGCTGCATGAGGTAAATATAATTTGGAAAAACAT---CACTCAAATTATCTTA-CATTTTTTTGCTGCAGGAGCTC-CACGTCCATCATCGTTATCTAGGAAACAGGATGCAAGAAAAAATAATCACAATGATTGAGTGGAGAACCTTGGGCACTTAGGTCCTCATGTTCTTCTTATGGACTTTAGC-CCCTCTTTGGGAACT-----GGAGAATGTCTTTTCTACTCTTGGGATGTTCACTGGGTCCCCAAATCAGGGCCAGAATATTAGATA-GCTTTT i canFam3.chr1 C 0 I 2753 e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=25114.000000 s hg38.chr19_GL949747v2_alt 25998 20 + 729520 CTTAATAGTCCTGGAGTTTG s panTro4.chr19 58962709 20 + 63644993 CTTAATACTCCTGGAGTTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828968 20 + 60714840 CTTAATACTCCTGGAGTTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595708 20 - 106955855 CCTAATACTCCTGGAGTTTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884810 20 + 64156825 CCTAATACTCATGGAGTTTG i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45313444 20 + 49145316 CCTAATACTCCTGGAGTTTG i calJac3.chr22 C 0 I 604 e canFam3.chr1 19471036 2753 - 122678785 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=293891.000000 s hg38.chr19_GL949747v2_alt 26018 266 + 729520 ATAGTATTTTTAATAACAAAAATATTTATGAATGACCCTGCTAACG--CCCCCTCCAGTTTGATTCCTTGCCAGTCTTCTCTATCTTGACAAAGAA---CACCATTCACCCAAAttctttctttct-------------tttattttttttg----agtcttgcactgttacccaagctggagtgcagtggcatgatctcagctcactgcaacctccgcctccc-gggttcaagagattctcctgcctcagccttccaagtagctgggactacaggcgcccgccaccac s panTro4.chr19 58962729 266 + 63644993 ATAGTATTTTTAATAACAAAAATATTTATGAATGACACTGCTAACG--CCCCCTCCAGTTTGATTCCTTGCCAGTCTTCTCTATCTTGACAAAGAA---CACCATTCACCCAAAttctttctttct-------------tttattttttttg----agtcttgcactgttacccaggctggagtgcagtggcatgatctcagctcactgcaacctccgcctccc-aggttcaagagattctcctgcctcagccttccaagtagctgggataacaggtgcctgccaccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828988 270 + 60714840 ATAGTATTTTTAATAACAAAAATATTTATGAATGACACTGCTAACG--CCCCCTCCAGTTTGATTTCTTGCCAGTCTTCTCTATCTTGACAAAGAA---CCCCATTCACCCAAAttctttctttct-------------ttttttttttttttttcagtcttgcactgttacccaggctggagtgcagtggcatgatctcagctcactgcaacctccacctccc-gggttcaagagattctcctgcctcagccttccaagtagctgggattacaggtgcctgccaccac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595728 262 - 106955855 ATAGTATTTTTAATAACAAAAATATTTATGAATGACACTGCTAACG--ACCCCTCCAGTTTGATTCCTTGCCAGTCTTCTCTATCTTGACAAAGAA---CACCATTCACCCAAAttctttcttttt-----------------ttttttttg----agtcttgcactgttacccaggctggagtgcagtggcatgatctcagctcactgcaacctccgcctcct-gggttcaagagattctcctacctcagccttcaaagtagctgggattacaggtacctgccaccac i nomLeu3.chr10 C 0 I 1525 s rheMac3.chr19 59884830 259 + 64156825 CTAG------------------TATTTATGAATGACACTGCTAACG--CCCCCTCCAGTATGATTCCTTGCCAGTCGTCTTTATCTTGACAAAGAA---CGCCATTCACCCAAATTCTTTCtttctttc--tttcttttttttttttttttg----agtcttgcattgtcacccaggctggagtacagtgacatgatctcagcccacagcaacctccgcctcct-gggtttaagagattctcctgcctcagccttccaagtagctgggattacaggcacctgccaccac i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45314068 289 + 49145316 ATAGTATTTTTAATAACAAAAATATTTATGTATGACCCTGCTAATGCCCCCCCTCCAGTTTGATTGCCTATTAGTCTTCTCTGTCTTGACAAAGAATACCACCATTCACCCAAATTCTTAtttttttttaatatcttttttgtttttttttaggacagtctcacactgtcacccaggctggagtgcagtggcacgatcttggctcactgcaacttccaacttctggggttcaagcagttctcctaattcagcctcccaagtagctgggattacaggtaagtgccaccag i calJac3.chr22 I 604 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=3910.000000 s hg38.chr19_GL949747v2_alt 26284 4 + 729520 accc s panTro4.chr19 58962995 4 + 63644993 accc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55829258 4 + 60714840 accc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59885089 4 + 64156825 accc i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45314357 4 + 49145316 accc i calJac3.chr22 C 0 I 308 e canFam3.chr1 19471036 2753 - 122678785 I e nomLeu3.chr10 102595990 1525 - 106955855 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=108669.000000 s hg38.chr19_GL949747v2_alt 26288 128 + 729520 tgctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctggcctcaagtgatcaacctgccttggccactcagaatactgggattccaggcatgagccac s panTro4.chr19 58962999 128 + 63644993 tgctaatttttgtatttttggtagagacagggtttcaccatgttggccaggctggtctcaaactcctggccttaagtgatcaacctgccttggccactcagaatactgggattccaggcatgagccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55829262 128 + 60714840 tgctaatttttgtatttttagtagagacggggtttcaccatgttggccagcctggtctcaaactcctggcctcaagtgatcaatctgccttggccactcagaatgctgggattccaggcatgagccac i ponAbe2.chr19 C 0 M 656 s rheMac3.chr19 59885093 128 + 64156825 tgctaatttttgtaattttagtagagacagagtttcaccatggtggccaggctggtctcaaactcctggcctcaagtgatcaacctgccttggccactcaaaatgctgggattccaggcatgagccac i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45314669 128 + 49145316 tgctaatttttgtatttttagtagagacagagtttcaccatgttggccaggctggtcttaaacttcaggcctcaagtgatcaacctgccttggtttcccaaagtgctgggattacaggcatgagccaa i calJac3.chr22 I 308 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e nomLeu3.chr10 102595990 1525 - 106955855 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=32277.000000 s hg38.chr19_GL949747v2_alt 26416 66 + 729520 tgcacctggccTATATTTCTATCTCCACAGTGGCACCATTTAGTCTAAGTTAAAATATCACCTACT s panTro4.chr19 58963127 66 + 63644993 tgcgcccggccTATATTTCTATCTCCACAGTGGCACCATTTAGTCTAAGTTAAAATATCACCTACT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59885221 66 + 64156825 tgcactcggccTATATTTCTATCTCCCCAGTGGCACCATTTAGTCTAAGTTAAAATATCACCTACT i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45314797 66 + 49145316 tgcacctggccTGTATTTCTGTCTCACCAGTGGCACCACTTGGTCTGATTTAAAATATCACCTACT i calJac3.chr22 C 0 I 3697 e canFam3.chr1 19471036 2753 - 122678785 I e ponAbe2.chr19 55829390 656 + 60714840 M e nomLeu3.chr10 102595990 1525 - 106955855 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=37115.000000 s hg38.chr19_GL949747v2_alt 26482 156 + 729520 Tggccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcagatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaaccccgtctctactaaaaatacaaaaagttagccgagcgtggtggcgggcc s panTro4.chr19 58963193 156 + 63644993 Tggccgggcgtggtggctcacgcctgtaaccccagcactttgggaggccgaggcgggcggatcacaaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaagttagccaagcgtggtggcgggcg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59885287 155 + 64156825 CAgccaggtacggtggctcaggcctgtaatcccagcactttgggaggccgaggcaggcagatcacgaggtaaagagattgagaccatcctggataacatggtaaaaccctgtctctactaaaaatacaaaaa-ttagccaggcatggtggtgggcg i rheMac3.chr19 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e ponAbe2.chr19 55829390 656 + 60714840 M e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102595990 1525 - 106955855 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=151114.000000 s hg38.chr19_GL949747v2_alt 26638 320 + 729520 cctgtagtcccagctactcgggaggctgaggcaggag-aatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgagggacagagccagactccgtctcaaaaaaaaaataaaaataaaaataaaa----atGAAATGAAatatcacctactcaccagtccctggcaaccaccagt--------tgcttctgtgagtttggcttttttagactacacatatgagtgagatcctgcagaatttgtctttctgagtctggcttattttgtttagcatgatatatgcggagatgttgatgaaagggta s panTro4.chr19 58963349 332 + 63644993 cctgtagtcccagctactcgggaggctgaggcaggag-aatggtgtgaacccgggaggcagagcttgcagtgagctgagatcgcaccactgcactccagcctgagtgacagagccagactccgtctcaaaaaaaataaataaataaaaataaaaTGAAATAAAATAAAatatcacctactcaccagtccctggtaaccaccagtatactctctgcttctgtgagtttggcttttttagactacgcatatgagtgagatcctgcagaatttgtctttctgagtccggcttattttgtttagcatgatatatgcggagatgttgatgaaagggta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55830049 329 + 60714840 cctgtagtcccag-tactctggaggctgaggcaggagaaatgcaatgaacttgtgagacagagcttgcagtgagctgagattgcaccactgcactccagcctgggcgacagagccagactccgtctcaaaaaaaataaataaataaaaataaaataaaat---ataaaatatcacctactcaccagtccctggcaaccaccagtatactctctgcttctgtgagtttgggtttcttagactacacatatgagtgagatcctgcagaatttgtctttctgagtctggcttattttgtttagcacgatatatggggacatgttgatgaaagggta i ponAbe2.chr19 M 656 C 0 s rheMac3.chr19 59885442 320 + 64156825 cctgtagtcccagctacttgggaggctgaggcaggag-aatggcgtgaacctgggaggccgagcttgcagtgagctgagatcgcaccactacactccagcctgggcgacagagcgagactccgtctcaaaataaataaataaataaaaataa-----------ataaaGTAtcacctactcaccagtccctggcaaccaccagtagactctctgcttctgtgagtttggctttttcaggccacacatgtgagtgagatcatgcagaatttgtctttctgagtctggcttattttgtttaacataatgtatggggagatGTTGATGAAA-GGTA i rheMac3.chr19 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102595990 1525 - 106955855 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=8823.000000 s hg38.chr19_GL949747v2_alt 26958 5 + 729520 taagt s panTro4.chr19 58963681 5 + 63644993 taaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55830378 5 + 60714840 taaat i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59885762 5 + 64156825 TAAAT i rheMac3.chr19 C 0 I 311 s macFas5.chr19 54903304 5 + 59248254 TAAAT i macFas5.chr19 M 20327 C 0 s papAnu2.chr19 47023517 5 + 51301725 taaat i papAnu2.chr19 I 502 C 0 s chlSab2.chr6 46735671 5 + 50890351 TAAAT i chlSab2.chr6 I 352 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102595990 1525 - 106955855 I a score=1854538.000000 s hg38.chr19_GL949747v2_alt 26963 1074 + 729520 ttccagttctaagatgaagaagttcaggtgctcagcatggtggcaatggatgtgctaattaatttgactgtgataatcattacacaatgtacaggtggatcaaatcatcagattgtataccttgaatatatacaatcttcatttgtcaatttgatatttttaaatttaaaaaGTCGTATTGCCTGAAACGCACCAACTCTTACTACATCTAGTCCCTTATTTTCCAAAAGCAGCCAGAGgccgggcatgatggcctgtgcctgtaatctcagatgcttgggaggctgaggtg------------------------------ggaggattacctgggcctgggaggtcaaggctgcagtgagctgtgattgca-------------------------------------------ccactgcactccagcctgggcaaccgagtgggaccctgtctcaaaaaaaaaaaaaaaaaaaaaa----gcagccagtgacccttccagcatataaataaaatcatgccatcctccagctcaacttcatcagtgggttcctgttctttcaaagcagactctaggaccagttcaaacacccacaagatcctagatgctctaggccctgcct---------------------------------tatgtcctcctttctgtgtctcaatcattccaggaacactcacacttctgagactttgcttttgctgctctctctccctggagggctgttctccagatatcggtgtggttgggtcattctcatccttcaTGCTtgtggcagatagaccctaagggggcactcaggagactcaggagccctgcttcctggtgttcatgcctttgtctaatcccctcaccttgagtgtggagatctgtgactttcttctcaccaatagctatggcaaaggtgatgggatgttatgctcttgattatgttacattacataaaactctgtttgctagggcatttgctctctctttcttct--ctctctctcaatctctcttcttgcaagtgctgcagaatcattctagcatgaatcctacagctataaagaaccagatattgctatcaaccacaggagtggagaaatggacccttccccagtcaagcctccagatgagccagatgagaacacagcccttgttgacaccttgattgcatcctt s panTro4.chr19 58963686 1077 + 63644993 ttccagttctaagatgaagaagttcaggggctcagcatggtggcaatggatgtgctaattaatttgaccgtgataatcattacacaatgtacaggtggaacaaatcatcagattgtataccttgaatatatacaatcttcatttgtcaatttgatatttttaaatttaaaaaGTCATATTGCCTGAAATGCACCAACTCTTACTACATCTAATCCCTTACTTTCCAAAAGCAGCCAGAGgccgggcatgatggcctgtgcctgtaatctcagctgcttgggaggctgaggtg------------------------------ggaggattacctgggcctgggaggtcaaggctgcagtgagctgtgatcgca-------------------------------------------ccactgcactccagcctgggcaaccgagtgggaccctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaagcagccagtgaccgttcaagcatataaatcaaatcatgccatcctccagctcaacttcatcagtgggttcctgttctttcaaagcagactctaggaccagttcaaacacccacaagatcctagatgctctaggccctgcct---------------------------------tatgtcctcctttctgtgtctcaatcattccaggaacactcacacttctgagactttgcttttgctgctctctc-ccctggagggctgttctccagatattggtgtggttgggtcattctcatccttcaTGCTtgtggcagatagaccctaagggggcactcaggagactcaggggccctgcttactggtgttcatgcctttgtctaatcccctcaccttgagtgtggagatctgtgactttcttctcaccaatagctatggcaaaggtgatgggatgttatgctcttgattatgttacattacataaaactctgtttgctagggcatttgctctctctttcttct--ctctctctcaatctctcttcttgcaagtgctgcagaatcagtctagcatgaatcctacagctgtaaagaaccagatattgctagcaaccacaggagtggagaaatggacccttccccagtcaagcctccagatgagccagatgagaacacagccctggttgacaccttgattgcatcctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55830383 1060 + 60714840 ttccagttctaagatgaagaagttcaggtgcccagcatggtgacaatggatgtgctaattaatttgactgtgataatcattacacaatgtacaggtggatcaaatcatcagattgtataccttgaatatatacaatcttcttttgtcaatttgatatttttaaatttaaaaaGTTGTATTGCCTGAAATGCACCAACTCTTACTACATCTAATCCCTTATTTTCCAAAAGCTGCCAGAGgccgggcatgatggcatgtgcctgtaatctcagctgcttggggggctgaggtg------------------------------ggaggattacctgggcctgggaggtcaaggctgcagtgagctgtgatcaca-------------------------------------------ccactgcactccagcctgggcaacggagtgagaccctgtctcaaaaaaaaaaaaaaaaaaa-------gtagccagtgacccttcaagcatgtaaataaaatcatgccatcctccagctcaacttcatcagtgggttcctgttctttcaaagcagactctaggaccagttcaaacacccacaagatcctagatgctctaggccctgcct---------------------------------tctgtcctcctttctgtgtctcaatcattccaggaacactcacacttgtgagactttgattttgctgctctctctccctggagggctgttctccagatatcggtgtggttgggtgattctcatccttcatgtctgtggcagatagaccctaagggggcactcaggagactcaggagccctgcttcctggtgttcatgcctttgtctaatcccctcaccttgagtgtggagacctgtgactttcttctcaccaatagctatggcaaaggtgatgggatattatgctcttgattatgttacattacataaaa--ctgtttgctagggcatttgctctctctttcttct--ctctctctcagtctctcttcttgcaagtgctgcagaatcagtctagcatgaatcctacagctgtaaagaaccagatattgctagcaaccacaggagtggagaaatggacccttccccagtcaagcct---------ccagatgagaacacagccctggttgacaccttgattgcatcctt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59886078 1081 + 64156825 TTCCAGTTCTAAGATGAAGAAGTTCAGGTGCACAGCATGGTggcaatggatgtgctaattaatctgactgtgatcatcattacataatgtatagatggatcaaatcatcagattgtatatcttgaatatatacaatcttcatttgtcaattTGATATTTTTAAATTTAAAAAGTCATATTGCCTGAAATGCACCAACTCTTACCACATCTGATCCCTTATTTTCCAAAAGCAGCCAGAGgccaggcatgatggcatgtgcctgtaatctcagctgcttgggaggctgaggtgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn---------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncc-----------------gaaa-------------------aaaaaaaaaaaaaaaaaaaaa-----gcagccagtgacccttcaagcatataaataaaatcatgccattctccagttcaacttcatcagtgggttcctgttttttcaaagcagactctaggaccagttcaaacacccacaagaccctagatgctctaggccctgtcttctatccacaccttttattctgctgttcttttctctgtcctcctttctgtgtctcaatcattccaggaacactcacacttctgggactttgcttttgctgctctctctccctgaagggctcttctccagatatcgatgtggttgggtcattctcatatttcaTGCCtgtgacagatagaccttaagggggcactcaggagactcaggagccctgctttctggtgttcatgcccttgtctaatctcctcaccttgagtgtggagacctgtgactttcttctcaccaatagatatggcaaaggtgatgggatgttatgctcttgattatgctacattacataaaactctgtttgctagggcatttgctctctctctctctc----ctctctcaatctctcttcttgcaagtgctgcagaatcagtctaacatgaatcctacagctgcaaagaaccagatgttgctagcaaccacaggagtggagaaatggacccttccccaatcaagcct---------ccagatgagaacccagccctggatgacaacttgattgcatcctt i rheMac3.chr19 I 311 C 0 s macFas5.chr19 54903309 1092 + 59248254 TTCCAGTTCTAAGATGAAGAAGTTCAGGTGCACAGCATGGTggcaatggatgtgctaattaatctgactgtgatcatcattacataatgtacagatggatcaaatcatcagattgtatatcttgaatatatacaatcttcatttgtcaattTGATATTTTTAAATTTAAAAAGTCATATTGCCTGAAATGCACCAACTCTTACCACATCTGATCCCTTATTTTCCAAAAGCAGCCAGAGgccaggcatgatggcatgtgcctgtaatctcagctgcttgggaggctgaggtg------------------------------ggaggattacctgggcctgggaggtcaatgctgcagtgagctgtgattgca-------------------------------------------ccattgcactccagcctgggcaacagagtgag---ctgtctcgaaaaaaaaaaaaaaaaaaaa-----gcagccagtgacccttcaagcatataaataaaatcatgccattctccagttcaacttcatcagtgggttcctgttttttcaaagcagactctaggaccagttcaaacacccacaagaccctagatgctctaggccctgccttctatccacaccttttattctgctgttcttttctctgtcctcctttctgtgtctcaatcattccaggaacactcacacttctgggactttgcttttgctgctctctctccctgaagggctcttctccagatatcgatgtggttgggtcattctcatatttcatgcctgtgacagatagaccttaagggggcactcaggagactcaggagccctgctttctggtgttcatgcccttgtctaatcccctcaccttgagtgtggagacctgtgactttcttctcaccaatagatatggcaaaggtgatgggatgttatgctcttgattatgctacattacataaaactctgtttgctagggcatttgctctctctctctctc----ctctctcaatctctcttcttgcaagtgctgcagaatcagtctaacatgaatcctacagctgcaaagaaccagatattgctagcaaccacaggagtggagaaatggacccttccccaatcaagcct---------ccagatgagaacccagccctggatgacaacttgattgcatcctt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47023522 1094 + 51301725 TTCCAGTTCTAAGATGAAGAAGTTCAGGTGCACAGCATGGTGGCAATGGATGTGCTAATTAATCTGCCTGTGATCATCATTACATAATGTACAGATGGATCAAATCATCAGATTGTAtatcttgaatatatacaatCTTCATTTGtcaatttgatatttttaaatttaaaaagtcatattgcCTGAAATGTACCAACTCTTACCACATCTAATCCCTTATTTTCCAAAAGCAGccagaggccaggcatgatggcatgtgcctgtaatctcagctgcttgggaggctgaggtg------------------------------ggaggattacctgggcctgggaggtcaatgctgcagtgagctgtgatcgca-------------------------------------------ccattgcactccagcctgggcaacagagtgagaccctgtctcggaaaaaaaaaaaaaaaaaaa-----gcagccagtgACCCTTCaagcatataaataaaatcatgccattctccagttCAACTTCATCAGTGGGTTCCTGTTTTTTCAAAGCAGACTCTAGGACCAGTTCAAACACCCACAAGACCCTAGATGCTCTAGGCCCTGCCTTCTATCCACACCTTTTATTCTGCTGTTCTTTTCTCTGTCCTCCTTTCTGTGTCTCAATCATTCCAGGAACACTCACACTTCTGGGACTTTGCTTTTGCTGCTGTCTCTCCCTGAAGGGCTCTTCTCCAGATATTGATGTGGTTGGGTCATTCTCATATTTCATGCCTGTGACAGATAGACCTTAAGGGGGCACTCAGGAGACTCAGGAGCCCTGCTTTCTGGTGTTCATACCCTTGTCTAATCCCCTCACCTTGAGTGTGGAGACCTGTGACTTTCTTCTCACCAATagatatggcaaaggtgatgggatgtTATGCTCTTGATTATGCTACATTACATAAAACTCTGTTTGCTAGGGCatttactctctctctcctct----ctctctcaatctctcttctTGCAAGTGCTGCAGAATCAGTCTAACATGAATCCTAAAGCTGCAAAGAACCAGATATTGCTAGCAACCACAGGAGTGGAGAAATGGACCCTTCCCCAATCAAGCC----------CCAGATGAGAACCCAGCCCTGGTTGACAACTTGATTGCATCCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46735676 1088 + 50890351 TTCCACTTCTAAGATGAAGAAGTTCAGGTGCACAGCATGGTggcaatggatgtgctaattaatctgactgtgatcatcgttacataatgtacagatggatcaaatcatcagattgtatatcttgaatatatacaatcttcatttgtcaattTGATATTTTTAAATTTAAAAAGTCATATTGCCTGAAATGCACCAACTCTTACCACATCTAATCCCTTATTTTCCAAAAGCAGCCAGAGgccgggcatgatggcatatgcctgtaatctcagctgcttgggaggctgaggtg------------------------------ggaggattacctgggcctgggaggtcaaggctgcagtgagctgtgatcgca-------------------------------------------ccactgcactccagcctgggcaacagagtgagaccctgtctcg-----aaaaaaaaaaaaaaa-----gcagccagtgacccttcaagcatataaataaaatcatgccattctccag------ttcatcagtgggttcctgttttttcaaagcagactctaggaccagttcaaacacccacaagaccctagatgctctaggccctgccttctgtccacaccttttattctgctgttcttttctctgtcctcctttctgtgtctcaatcattccaggaacactcacacttctgggactttgcttttgctgctctctgtccctgaagagctcttctccagatatcgatgtggttgggtcattctcatatttcatgcctgtgACAGATAGACCTTAAGGGGGCACTCGGGAGACTCAGgagccctgctttctggtgttcatgcctttgtctaatcccctcaccttgagtgtggagacctgtgactttcttctcaccaacagatatggcaaaggtgatgggatgttatgctcttgattatgctacattacataaaactctgtttgctagggcatttgctctctctctctctcctctctctctcaatctctctTCTTGCAAGTGCTTCAGAATCAGTCTAacattaatcctacagctgcaaagaaccagatattgctagcaaccacaggagtggagaaatggacccttccccaatcaagcct---------ccagatgagaacccagccctggttgacaccttgattgcatcctt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102595990 1525 - 106955855 I a score=1413945.000000 s hg38.chr19_GL949747v2_alt 28037 608 + 729520 atgagacccaaagcagaggactcagctaagctgtgcctggactcctgacccacatcaactgtgagataataaataggtgtttcaggctgctaaattagtggtaatttgttatgcagctgtagatcactaatacaATGCCTCTCAcagttattctccatctataatgtgttttttaattactctgatagcttgctcttatttctttctttcttccaaagaagaatgtgagctcctgttggccagagacctggtctgtctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGGGTGAATGGGCAGCTATTTTTGTGCCAGGTATTTTGCATTAATTTTTTTTT--GTAATGGAAGCATTTATATGCCCATTTTgtaataagtaaaaagtagtataataaaaaagtaaaaagtaGTATAATAAAGTGATTTGCAAAGCAGCAAACAGATTGTATATGGAAGGCTGACCTGGAAAATCAACCACTGGAAATTGATACTATAGCCTGTCTTGTGATGTAATGGTACAGCTGCGATAGAGGTGAAGAAATCAGGAAACAGTAGATGATATGCCAGAGAACATAATTGGGAAATGGCAAAT s panTro4.chr19 58964763 610 + 63644993 atgagacccaaagcagaggactcagctaagctgtgcctggactcctgacccacatcaactgtgagataataaataggtgtttcaggctgctaaattagtggtaatttgttatgcagccgtagatcactaatacaATGCCTCTCAcagttattctccatctataatgtgttttttaattactctgatagcttgctcttatttctttctttcttccaaagaagaatgtgagctcctgttggccagagacctggtctgtctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGGGTGAATGGGCAGCTATTTTTGTGCCAGGTATTTTGCATTAATTTTTTTTTTTGCAATGGAAGCATTTATATGCCCATTTTGTAATAAGTAAAAAGTAGTATAATAAAAAAGTAAAAAGTAGTATAATAAAGTGATTTGCAAAGCAGCAAACAGATTGTATGTGGAAGGCTGACCTGGAAAATCAACCACTGGAAATTGATACTATAGCCTGTCTTGTGATGTAATGGTACAGCTGCGATAGAGGTGAAGAAATCAGGAAATAGTAGATGATATGCCAGAGAACATAATTGGGAAATGGCAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55831443 584 + 60714840 atgagacccaaagcagaggattcagctaagctgtgcctggactcctgacccacatcaactgtgagataataaataggtgtttcaggctgctaaattagtggtaatttgttatgcagccatagatcactaatacaATGCCTCTCAcacttattctccatctataatgtgttttttaattactctgatagcttgctcttatttatttctttcttccaaagaagaatgtgagctcctgttggccagagacctggtctgtctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGGGTGAATGGGCAGCTATTTTTGTGCCAGGTATTTTGCACTAATTGTTTTT---GTAATGGAAGCATTTATATGCCCATTTTGTAAT-----------------------AAGTAAAAAGTAGTATAATAAAGTGATTTGCGAAGCAGCAAAAAGATTGTATATGGAAGGCTGACCTGGAAAATCAACCACTGGAAATTGATACTATAGCCTGTCTTGTGATGTAATGGTACAGCTGTGATAGAGGTGAAGAAATCGGGAAACAGTAGATGATATTCCAGAGAACATAATTGGGAAATGGCAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102597515 583 - 106955855 AtgtgacccaaagcagaggactcagctaagctgtgcctagactcctgacccacatcaactgtgagataataaataggtgtttcagtctgctaaattagtggtaatttgttttgcagccatagatcactaatacaATGCCTCTCACAGTTATTTTCCATCTATAATGTGTTTTTTAATTACTCCAATAGCTTGCTCttatttatttatttctttcaaagaagaatgtgagctcctgttggccagagacctggtccatctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGGGTGAACGGACAGCTATTTTTGTGCCAGGTATTTTGCATTAATTTTTTT----GTAATGGAAGCATTTATATGCCCATTTTGTAAT-----------------------AAGTAAAAAGTAGTATAATAAAGTGATTTGCAAAGCAGCAAACAGATTGTATATGGAAGGCTGACCTGGAAAATCAACCACTGGAAATTGATACTATAGCCTGTCTTGTGATGTAATGGTACAGCTGCGATAGAGGTGAAGAAATCAGGAAACAGTAGATGATATGCCAGAGAACATAACTGGAAAATGGCAAAT i nomLeu3.chr10 I 1525 I 717 s rheMac3.chr19 59887159 581 + 64156825 atgagaaccaaagcagaggactcagctaagctgtgcctggactcctgacccacatcaactgtgaggtaataaataggtgtttcaggcggctaaattagtggtaattagttatgcagccatagatcactaatacaATGCCTCTCAcagttattctccatctataatgtgttttttaattactctgatatctttctg----ttatttctttcttccaaagaagaatgtgagctcctgttggccagagacctggtctgtctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGGCTGAATGGGCAGCTATTTTTGTGCCAGGTATTTTGCATTAAATTTTTTTT--GTAATAGAAGCATTTATATGCCCATTTTGTAAT-----------------------AAGTAAAAAGTAGTATAATCAAGTGATTTGTAAAGCAGCAAACAGATTGTATATGGAAGGCTGACCTGGAAAATCAACCACTTTAAATTGATACTATAGCCTGTCTTGTGATATAATGGTATAGCTGCGATAGAGGTAAAGAAATCAGGAAATAGTAGATGATCTGCCAGAGAACATAATTGGGAAATGGCAAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54904401 581 + 59248254 atgagaaccaaagcagaggactcagctaagctgtgcctggactcctgacccacatcaactgtgaggtaataaataggtgtttcaggcggctaaattagtggtaattagttatgcagccatagatcactaatacaatgcctctcacagttattctccatctataatgtgttttttaattactctgatatctttctg----ttatttctttcttccaaagaagaatgtgagctcctgttggccagagacctggtctgtctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGGCTGAATGGGCAGCTATTTTTGTGCCAGGTATTTTGCATTAAATTTTTTTT--GTAATAGAAGCATTTATATGCCCATTTTGTAAT-----------------------AAGTAAAAAGTAGTATAATCAAGTGATTTGTAAAGCAGCAAACAGATTGTATATGGAAGGCTGACCTGGAAAATCAACCACTTTAAATTGATACTATAGCCTGTCTTGTGATATAATGGTATAGCTGCGATAGAGGTGAAGAAATCAGGAAATAGTAGATGATCTGCCAGAGAACATAATTGGGAAATGGCAAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47024616 585 + 51301725 ATGAGAACCAAAGCAGAGGACTCAGCTAAGCTGTGcctggactcctgacccacaTCAACTGTGAGGTAATAAATAGGTGTTTCAGGCTGCTAAAttagtggtaatttgttatgcagccatAGATCACTAATACAATGCCTCTCACAGTTATTCTCCATctataatgtgttttttaattacTCTGATATCTTTctgctatttatttctttcttccaaagAAGAATGTGAGCTCCTGTTGGCCAGAGACCTGGTCTGTCTCAGTTCCTACAATATGCTCAGGATCTACCAAAGTATCTGAATTTGTAGGCTGAATGGGCAGCTATTTTTGTGCCAGGTATtttgcattaaatttttttt--gtaatagaaGCATTTATATGCCCATTTTGTAAT-----------------------AAGTAAAAAGTAGTATAATCAAGTGATTTGTAAAGCAGCAAACAGATTGTATATGGAAGGCTGACCTGGAAAATCAACCACTTTAAATTGATACTATAGCCTGTCTTGTGATGTAATGGTATAGCTGCGATAGAGGTGAAGAAATCAGGAAATAGTAGATGATCTGCCAGAGCACATAATTGGGAAATGGCAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46736764 584 + 50890351 atgagaaccaaagcagaggactcagctaagctgtgcctggactcctgacccacatcaactgtgagataataaataggtgtttcaggctgctaaattagtggtaatttgttatgcagccatatatcactaatacaATGCccctcacagttattctccatctataatgtgttttttaattactctgatatctttctgttctttctttctttcttccaaagaagaatgtgagctcctgttggccagagacctggtctgtctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGACTAAATAGGCAGCTATTTTTGTGCCAGGTATTTTGCATT-ATTTTTTTTT--GTAATAGAAGCATTTATATGCCCATTTTGTAAT-----------------------AAGTAAAAAGTAGTATAATCAAGTGATTTGCAAAGCAGCAAACAGATTATATATGGAAGGCTGACCTGGAAAATCAACCACTTTAAACTGATACTATAGCCTGTCTTGTGATGTAATGGTATAGCTGTGATAGAGGTGAAGAAATCAGGAAATAGTAGATGATCTGCCAGGGAACATAATTGGGAAATGGCAAAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I a score=77884.000000 s hg38.chr19_GL949747v2_alt 28645 44 + 729520 AATCGCGAGGCTTTTAGGGCTAAAGTGTGGGTGCAGAAATTCTT s panTro4.chr19 58965373 44 + 63644993 AATCGCCAGGCTTTTAGGGCTAAAGTGTGGGTGCAAAAATTCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55832027 44 + 60714840 AATCACCAGGCTTTTAGGGCTAAAGTGTGGGTGCGAAAATTCTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59887740 44 + 64156825 AATCGCCAGGCTTTTAGGGCTAAAGTGTGGGAATGAAAATTCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54904982 44 + 59248254 AATCGCCAGGCTTTTAGGGCTAAAGTGTGGGAATGAAAATTCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47025201 44 + 51301725 AATCGCCAGGCTTTTAGGGCTAAAGTGTGGgaatgaaaattctt i papAnu2.chr19 C 0 I 15035 s chlSab2.chr6 46737348 44 + 50890351 AATCGCCAGGCTTTTAGGGCTAAAGTGTGGGTACGAAAATTCTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=310628.000000 s hg38.chr19_GL949747v2_alt 28689 239 + 729520 AAGACTACAAGAACGAGTTATGGGGAATACAATTTGAAATCAATATCAAAGTGATGAGCACCTTGTTGGAGTATCATTGATCAAGAGCCTCAGAAAGAGGGTAAATCAGAGGTGAAACATTAAGTATTCAGTTACTCATCATGCCCCAAGCCCAGGCTAAGTCATTGGTGTGGACCCACGGCTACTTCTACACTACACTGATGACTGTAAAGTCTCTCCAGGGATTTCCCATGATATGG s panTro4.chr19 58965417 239 + 63644993 AAGACTACAAGAATGAGTTATGGGGAATACAATTTGAAATCAATATCAAAGTGATGAGCACTTTGTTGGAGTATCATTGATCAAGAGCCTCAGAAAGAGGGTAAATCAGAGGTGAAACATTAAGTATTCAGTTACTCATCATGCCCCAAGCCCAGGCTAAGTCATTGGTGTGGACCCACAGCTACTTCTACACTACACTGATGACTGTAAAGTCTCTCCAGGGATTTCCCATGATATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55832071 234 + 60714840 AAGACTACAAGAAAGAGTTATTGGGAATACAATTTGAAATCAATATCAAAGTGATGAGCACCTTGTTGGAGCATCATTGATCAACAGCCTCAGAAAGAGGGTAAATCAGAGGTGAAACATTAAGTACTCAGTTACTCATCATGCCCCAAGCCCAGGCTAAGTCATTGGTGTGGACCCATGGCTACTT-----CTACACTGATGACTGTAAGGTCTCTCCAGGGATTTCCCATGATATGG i ponAbe2.chr19 C 0 M 630 s rheMac3.chr19 59887784 238 + 64156825 AAGACTACAAGAAAAAGTTATTGGGAATACAA-TTGAAATCAACATCAAAGTGATGAGAACCTTGTTGGAGCATCACTGATCAAGAGCCTCAGAAAGAGGGTAAATCAGAGGTGAAACATTAAGTACTCAGTTACTCATCATGCCCCAAGCCCAGGCTAAGTCATTGGTGTGGACCCATGGCTACTTCTGCACTACATTGATGACTGTAAGGTCTCTCCAGGGATTTCCCATGATATGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54905026 238 + 59248254 AAGACTACAAGAAAAAGTTATTGGGAATACAA-TTGAAATCAACATCAAAGTGATGAGAACCTTGTTGGAGCATCACTGATCAAGAGCCTCAGAAAGAGGGTAAATCAGAGGTGAAACATTAAGTACTCAGTTACTCATCATGCCCCAAGCCCAGGCTAAGTCATTGGTGTGGACCCATGGCTACTTCTGCACTACATTGATGACTGTAAGGTCTCTCCAGGGATTTCCCATGATATGG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46737392 239 + 50890351 AAGACTACAAGAAAAAGTTATTGGGAATACAATTTGAAATCAACATCAAAGTGATGAGCACCTTGTTGGAGCATCACTGATCAAGAGCCTCAGAAAGAGGGTAAATCAGAGGTGAAACATTAAGTACTCAGTTACTCATCATGCCCCAAACCCAGGCTAAGTCATTGGTGTGGACCCTTGGCTACTTCTGCACTATACTGATGACTATAAGGTCTCTCCAGGGATTTCCCATGATATGG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47025245 15035 + 51301725 I a score=238356.000000 s hg38.chr19_GL949747v2_alt 28928 287 + 729520 CAGGACTGACCTACTGGAAGCAACTGTGGTCAGTTGAGAGGTATTGTTTAGTGACTAATAaatgaatggatga----------------atggatggatggatggatggatggatggatagatggatAggtgggt-gggggtgagtgaatgggtgaaagggtggatgagtggatgaatgggtggaaggatggacaaatgagtggctgggtaaatagatgggtaggtaggtagatagatggatgaaggggtgggtggacagatgaatggaagggttggtggttggatggattaatggatagatga s panTro4.chr19 58965656 279 + 63644993 CAGGACTGACCTACTGGAAGCAACTGCGGTCAGTTGAGAGGTATTGTTTAGTGACTAATAaatgaatggatga----------------atggatggatggatggatggat--------atatggatAGGTCGGT-GGGGGTGAGtgaatgggtgaaagggtggatgagtggatgaaagggtggaaggatggacaaatgagtggctgggtaaatagatggGTAGGTAGGTAgatagatggatgaaggggtgggtggacagatgaatggaagggttggtggttggatggattaatggatagatga i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59888022 296 + 64156825 CCAGATTGACCTACTGGAAGCAACTGTAGTCAATTGAGAGATATTGTTGAGTGACTAATAAatgaatagatggatggatggatggatgaatggatggatggatggatggat--------atatggataggtgggtggggggtgaatgaatgggtgaaagagtggatgagtggatgagtgggtggaaggatggacaaatgagtggctgggtaaatagatgggtaggtgggtagatagatggatgAAGGGGTGGGTAGACGAATGAATGGAAGGGTTGGTGGTtggatggattaatggatagatga i rheMac3.chr19 C 0 I 236 s macFas5.chr19 54905264 280 + 59248254 CCAGATTGACCTACTGGAAGCAACTGTAGTCAATTGAGAGATATTGTTGAGTGACTAATAAATGAATAgatgg----------------atggatggatggatggatggat--------ATatggataggtgggtggggggtgaatgaatgggtgaaagagtggatgagtggatgagtgggtggaaggatggacaaatgagtggctgggtaaatagatgggtaggtgggtagatagatggatgaaggggtgggtagacgaatgaatggaagggttggtggttggatggattaatggatagatga i macFas5.chr19 C 0 I 192 s chlSab2.chr6 46737631 280 + 50890351 CCAGATTGACCTACTGGAAGCAACTGTAGTCAGTTGAGAGGTATTGTTGAGTGACTAATAAATGAATAgatgg----------------atggatggatggatggatggat--------ATatggataggtgggtggggggtgaatgaatgggtgaaagggtggatgggtggatgagtgggtggaaggatggacaaatgagtggctgggtaaatagatgggtacgtgggtagatagatggatgaaggggtgagtggacgaatgaatggaagggttggtggttagatggattaatggatagatga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e ponAbe2.chr19 55832305 630 + 60714840 M e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47025245 15035 + 51301725 I a score=9460.000000 s hg38.chr19_GL949747v2_alt 29215 10 + 729520 atggatggat s panTro4.chr19 58965935 10 + 63644993 atggatggat i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59888554 10 + 64156825 atggatggat i rheMac3.chr19 I 236 C 0 s macFas5.chr19 54905736 10 + 59248254 atggatggat i macFas5.chr19 I 192 C 0 s chlSab2.chr6 46737911 10 + 50890351 atggatggat i chlSab2.chr6 C 0 I 176 e canFam3.chr1 19471036 2753 - 122678785 I e ponAbe2.chr19 55832305 630 + 60714840 M e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47025245 15035 + 51301725 I a score=277224.000000 s hg38.chr19_GL949747v2_alt 29225 329 + 729520 ggatggatggatggatggatggatgagttgatggatagatggat--------------------------------aagtgagtggatggatgggtgaatgagtgggtaggagggtggatgggttggtaggtgggtagatgggtgggtgggttgatagatgggt------------------------gggtagattgatagatggatgggtgagtAGATAAATGGGTAGATGAAAGTGATGCAAAATTATTCTTTATCCCTCTTCCTTGGGATCTCAAGTCATGTATGTTACAATCCTCCCACGTGCATCTTCTCACTGTGGTCCTCATCATTTTTT--TTTCAGTTACCTGCACCGTGCCTCCCATACTTTTCCACACAATGGGA s panTro4.chr19 58965945 385 + 63644993 ggatggatggatggatggatggatgagttgatggatagatggatggatggatggatgagttgatggatagatggataagtgagtggatggatggGTGAATGAGTGGGTAGGAGAGtggatgggttggtaggtgggtagatgggtgggtgggttgatagatgggtaggtagattgatagacggatgggtgggtagattgatagatggatgggtgggtagataaatggGTAAATGAAAGCGATGCAAAATTATTCTTTATCCCTCTTCCTTGGGATCTCAAGTCATTTATGTTACAATCCTCCCACGTGCATCTTCTCACCGTGGTCCTCATCATTTTTT--TTTCAGTTACCTGCACCATGCCTGCCACACTTTTCCACACAATGGGA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59888564 331 + 64156825 ggatggatggatggatggatgggtgagttgatggatagatggat--------------------------------aagtgagtggatggatgggtgaatgagtgggtgggagggtagatgggttggtaggtgggtagatgggtgggtgggttgatagatgggt------------------------aggtggatggatagatggatgggtgggtAGATAAACGGGTAGATGAAAATGATGCAAAATTATTCTTTATCCCTCTTCCTTGGGATCTCAAGTCACTTATGTTACAATCCTCCCATGTGCATCCTCTCACTGTGGTCCTCATCATTTTTTAATTTCAGTTGCCTGCACCATGCCTGCCATATTTTCCCACACAATGGGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54905746 331 + 59248254 ggatggatggatggatggatgggtgagttgatggatagatggat--------------------------------aagtgagtggatggatgggtgaatgagtgggtgggagggtagatgggttggtaggtgggtagatgggtgggtgggttgatagatgggt------------------------aggtggatggatagatggatgggtgggtagataaacgggtagatgAAAATGATGCAAAATTATTCTTTATCCCTCTTCCTTGGGATCTCAAGTCACTTATGTTACAATCCTCCCATGTGCATCCTCTCACTGTGGTCCTCATCATTTTTTAATTTCAGTTGCCTGCACCATGCCTGCCATATTTTCCCACACAATGGGA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46738097 327 + 50890351 ggatggatggatggatggatgggtgagtt----gatagatggat--------------------------------aagtgagtagatggatgggtgaatgagtgggtgggagggtggatgggttggtaggtgggtagatgggtgggtgggttgatagatgggt------------------------aggtggatggatagacagattggtgggtagataaatgggtagatgaaagtgatgTAAAATTATTCTTTATCCCTCTTCCTTGGGATCTCAAGTCACTTATGTTACAATCCTCCCATGTGCATCCTCTCACTGTGGTCCTCATCATTTTTAAATTTCAGTTACCTGCACCATGCCTGCCATATTTTCCCACACAATGGGA i chlSab2.chr6 I 176 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e ponAbe2.chr19 55832305 630 + 60714840 M e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47025245 15035 + 51301725 I a score=385562.000000 s hg38.chr19_GL949747v2_alt 29554 302 + 729520 TCTCTTAGCCCCACAATCCATTATTTGCCATTCCTACATCCCTCATAGAGCACTGGACACTCTTTCTGGCTTTCCTTCTCTGGCATAATGAAATATAAA-TTTTCATTTATgtctgaatagcaactgtgaagctcattgtttttgtgacaccggggaggtcacctaatctctatgagcaaaaagaagttagtaacacaaccaccctcataggaagtgaagactgaatgagttagtggaggcaagttacctgtcgtggagacaggaacatagaaaatgctggatacatgtCAAATGCCAGTGTT s panTro4.chr19 58966330 301 + 63644993 TCTCTTAGCCCCACAATCCATTATTTGCCATTCCTACATCCCTCATGGAGCACTGGACACTCTTTCTGGCTTTCCTTCTCTGGCATAATGAAATATAAA-TTTTCATTTATGTCTGAATAG-AACTGTGAAGCTCATTGTTTTtgtgaaaccggggaggtcacctaatctctatgagcaaaaagaagttagtaacacaaccaccctcataggaagtgaagactgaatgagttagtggaggcaagttacctgtcgtggagacaggaacatagaaaatgctggatacatgtCAAATGCCAGTGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55832935 301 + 60714840 TCTCTTAGCCCCATAATCCATTATTTGCCATTCCTACATCCCTCATAGAGCACTGGACACTCTTTCTGGCTTTCCTTCTCTGGCATAAAGAAATATAAA-TTTTCATTTATgtctgaacagcaactgtgaagctcattgtttttgtgacaccggggaggtcacctaatctccataagcaaaaagaagttagtaacacaaccaccctcataggaaatgaagactgaatgtgttagtggaggcaagttacctgtc-tagagacaggaacatagaaaatgctggatacatgtCAAATGCCAGTGTT i ponAbe2.chr19 M 630 C 0 s rheMac3.chr19 59888895 297 + 64156825 TCTCTTAGCCCCATCCTCCATTATTTGCCATTCCTACATCCCTCATAGAGCACTGGACACTCTTTCTGGCTTTTCTTCTGTGGCATAAAGAGATATAAA-TTTTCATTTATgtctgaactgcaactgtgaagctcattgtctttgtgacatcggggaggtcacctagtctctataagcaaaa-----ttagtaacacaaccaccctcacaggaagtgaagactgaatgagttagtggaggcaagttacctgtcgtggagagaggaacatagaaaatgctggatacatgtCAAATGCCAGTGTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54906077 297 + 59248254 TCTCTTAGCCCCATCCTCCATTATTTGCCATTCCTACATCCCTCATAGAGCACTGGACACTCTTTCTGGCTTTTCTTCTGTGGCATAAAGAAATATAAA-TTTTCATTTATgtctgaactgcaactgtgaagctcattgtctttgtgacatcggggaggtcacctagtctctataagcaaaa-----ttagtaacacaaccaccctcacaggaagtgaagactgaatgagttagtggaggcaagttacctgtcgtggagagaggaacatagaaaatgctggatacatgtCAAATGCCAGTGTT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46738424 298 + 50890351 TCTCTTAGCCCCATCCTCCATTATTTGCCATTCCTACATCCCTCATAGAGCACTGGACACTCTTTCTGGCTTTTCTTCTGTGGCATAAAGAAATATAAATTTTTCATTTATgtctgaacagcaactgtgaagctcattgtctttgtgacatcggggaggtcacctagtctctataagcaaaa-----ttagtaacacaaccaccctcataggaagtgaagactgaatgagttagtggaagcaagttacctgtcgtggagacaggaacatagaaaatgctggatacatgtCAAATGCCAGTGTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47025245 15035 + 51301725 I a score=12555.000000 s hg38.chr19_GL949747v2_alt 29856 8 + 729520 ATCACTCT s panTro4.chr19 58966631 8 + 63644993 ATCACTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833236 8 + 60714840 ATCACTCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59889192 8 + 64156825 ATCACTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54906374 8 + 59248254 ATCACTCT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46738722 8 + 50890351 ATCACTCT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103184196 8 + 122678785 ATCATGCA i canFam3.chr1 n 2753 C 0 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47025245 15035 + 51301725 I a score=226918.000000 s hg38.chr19_GL949747v2_alt 29864 133 + 729520 ATCCTCACCTGTCACCCAGATCTCCAGCTTGTTGCTGGGGAAGGAGGCCAAGTGTGATGAGTTGCTCAGGTAATACACACAGCTGTAGTTTCCACTGTCATTACTTGTCACGTTCCAGAGCATG-----------------------------------AAATCAGTC s panTro4.chr19 58966639 133 + 63644993 ATCCTCACCTGTCACCCAGATCTCCAGCTTGTTGCTGGGGAAGGAGGCCAAGTGTGATGAGTTGCTCAGGTAATACACACAGCTGTAGTTTCCACTGTCATTACTTGTCACGTTCCAGAGCATG-----------------------------------AAATCAGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833244 133 + 60714840 ATCCTCACCTGTCACCCAGATCTCCAGCTTGTTGCTGGGGAAGGAGGCCAAGTGTGATGAGTTGCTCAGGTAATACACACAGCTGTAGTTTCCACTGTCATTACTTGTCACGTTCCACAGCATG-----------------------------------AAATCAGTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59889200 133 + 64156825 ATGCTCACCTGTCACCCAGATCTCCAACTTGTTGCTGGGGAAGGAGGCCAAGTGTGATGAGTCACTCAGGTAATACACACAGCTGTAGTTTCCATTGCCATTACTTGTCACATTCCAGAGCATG-----------------------------------AAATCTGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54906382 133 + 59248254 ATGCTCACCTGTCACCCAGATCTCCAACTTGTTGCTGGGGAAGGAGGCCAAGTGTGATGAGTCACTCAGGTAATACACACAGCTGTAGTTTCCATTGCCATTACTTGTCACATTCCAGAGCATG-----------------------------------AAATCTGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040280 133 + 51301725 ATCCTTACCTGTCACCAATATCTCAAGCCAATCACTGCGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACACGCAGCTGTAGTTCCCAGCGTTGCCGGCTGTCACGTCCTCCAGGGTG-----------------------------------AAGTCCGTC i papAnu2.chr19 I 15035 C 0 s chlSab2.chr6 46738730 168 + 50890351 ATGCTCACCTGTCACCCAGATCTCCAACTTGTTGCTGGGGAAGGAGGCCAAGTGTGATGAGTCACTCAGGTAATACACACAGCTGTAGTTTCCACTGCCATTACTTGTCACATTCCAGAGCATTCACATCTGTCTGTTTTTTTCTTACTTGTCACATTCACATCTGTC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103184204 133 + 122678785 AAACCTACCTCTCACCTGGATCTCCAGAAAATTGCTAGGCTGTGAGGTCAAAAAAGGGGCCCCTATCTGGAAGTACACGCAGCTGTAGTTCCCGGCATCACTGACTGTCACACTCCTGAGGGAG-----------------------------------AAGTCTGTC i canFam3.chr1 C 0 T 1206 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=2548.000000 s hg38.chr19_GL949747v2_alt 29997 1 + 729520 T s panTro4.chr19 58966772 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833377 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59889333 1 + 64156825 T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54906515 1 + 59248254 T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040413 1 + 51301725 T i papAnu2.chr19 C 0 T 14866 s chlSab2.chr6 46738898 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19473789 1 - 122678785 t i canFam3.chr1 I 2753 C 0 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=348393.000000 s hg38.chr19_GL949747v2_alt 29998 205 + 729520 GGTTTTTTCTTACTTGCCTGACTTGTAATGGTTCTGGGATCCCCATTTTCAACAGAGCAATTACAATACATTCGGTTCCATTGTATGGAGTGAGACATCGAAGTGTC---CTGAGACCTGGAGTCATCCCA-----------GGGTCTACATTGACTGAGAGCAAAGGTTCTGGGAGTGATCCTGAAGAGGACAAGGCAATGGAGGTAAAGAGAAGGGC s panTro4.chr19 58966773 205 + 63644993 GGTTTTTTCTTACTTGCCTGACTTGTAATGGTTCTGGGATCCCCATTTTCAGCAGAGCAATTACAATACATTCGGTTCCATTGTATGGAGTGAGACATCGAAGTGTC---CTGAGACCTGGAGTCATCCCA-----------GGGTCTACATTGACTGAGAGCAAAGGTTCTGGGAGTGATCCTGAAGAGGACAAGGCAATGGAGGTAAAGAGAAGGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833378 205 + 60714840 GGTTTTTTCTTACTTGCCTGACTTGTAATGGTTCTGGGATCCCCATTTTCAGCAGAGCAATTACAATACATTCAGTTCCATTGTATGGAGTGAGACATCGAAGTGTT---CTGGGACCTGGAGTCATCCCA-----------GGGTCTACACTGACTGAGAGCAAAGGTTCTGGGAGTGATCCTGAAGAGGACAAGGCAATGGAGGTAAAGAGAAGGGC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59889334 205 + 64156825 GTTTTTTTCTTACTTGCCTGACTTGTAATGGTTCTGGGATCCCCATTTTCAGCAGAGCAATTACAATACATTCAGTTCCATTGTATGGAGTTAGACATCAAAATGTC---CTGAGACCTGGAGTCATCCCA-----------GGGTCTACATTGACTGAGAGCAAAGGTTCTGGGAGTGACCCTGAAGAGAACAAGGCAATGGAGGTAAAGAGAAGGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54906516 205 + 59248254 GTTTTTTTCTTACTTGCCTGACTTGTAATGGTTCTGGGATCCCCATTTTCAGCAGAGCAATTACAATACATTCAGTTCCATTGTATGGAGTTAGACATCAAAATGTC---CTGAGACCTGGAGTCATCCCA-----------GGGTCTACATTGACTGAGAGCAAAGGTTCTGGGAGTGACCCTGAAGAGAACAAGGCAATGGAGGTAAAGAGAAGGGC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46738899 216 + 50890351 GTTTTTTTCTTACTTGCCTGACTTGTAATGGTTCTGGGATCCCCATTTTCAGCAGAGCAATTACAATACATTCAGTTCCATTGTATGGAGTGAGACATCAAAGTGTC---CTGAGACCTGGAGTCATCCCAGGGTCATCCCTGGGTCTACATTGACTGAGAGCAAAGGTTCTGGGAGTGACCCTAAAGAGAACAAGGCAATGGAGGTAAAGAGAAGGGC i chlSab2.chr6 C 0 I 457 s canFam3.chr1 19473790 208 - 122678785 GGATTTTTCTTATTTTCTCAAATTGTAGTGGTTCTGGAATCCCTGTTTTCAGCAGAGCAAGAGCAATACATTTGTGTCTATTGTATGGAATCAGACATCAGAGTCTCATACTGTGACCTGGAGTCATCTCG-----------GGGTCTATATTGAGTAAGAGGGAAGGTTTTAGGAGGGATTCTGAAGAGGACAAAGCAACAGGGGTGAAGAGAAGTAC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47040414 14866 + 51301725 T a score=4153.000000 s hg38.chr19_GL949747v2_alt 30203 4 + 729520 CAGG s panTro4.chr19 58966978 4 + 63644993 CAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833583 4 + 60714840 CAGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59889539 4 + 64156825 TAGG i rheMac3.chr19 C 0 I 345 s macFas5.chr19 54906721 4 + 59248254 TAGG i macFas5.chr19 C 0 I 354 s canFam3.chr1 19473998 4 - 122678785 CAAG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e chlSab2.chr6 46739115 457 + 50890351 I e papAnu2.chr19 47040414 14866 + 51301725 T a score=344342.000000 s hg38.chr19_GL949747v2_alt 30207 174 + 729520 GCTTTTCCATTTTCTACTGCACTTGGGGACTATCTCATCCATCTCTCCgtatta---accatgtctttcatcttctgcatttgatgctttaacatcttggggccttgctgcccttggtgggacctcccctcgcagggttagttaatttctagagccagtaaacaacttgtcctcaag s panTro4.chr19 58966982 170 + 63644993 GCTTTTCCATTTTCTACTGCACTTGGGGACTATCTCATCCATCTCTCtgtatta---accatgtctttcatcttccgcatttgatgctttaacgtcttggggccttgctgcccttggtgggacctcccctcgcagggtta----atttctagagccagtaaacaacttgtcctcaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833587 174 + 60714840 GCTTTTCCATTTTCTACTGCACTTGGGGACTATCTCATCCATCTCTCCgtatta---accatgtctttcattttctgcatttgatgctttaatgtcttagggccttgctgcccttggtggtacctcccctcccagggttagttaatttctagagccagtaaacaacttgtcctcaag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59889888 176 + 64156825 GCTTTTCCATTTTCTACTGCACTTGGGGACTATCTCATCCATCTCTCtgtattaaccaccatgtctttcattttctgcatttgatgctttgacatcttggggccttgctgcccttggtgggaccacccctcccagggttagttaatttctagagtcagtaaaccacttgtcctcaa- i rheMac3.chr19 I 345 C 0 s macFas5.chr19 54907079 176 + 59248254 gcttttccattttctACTGCACTTGGGGACTATCTCATCCATCTCTCtgtattaaccaccatgtctttcattttctgcatttgatgctttgacatcttggggccttgctgcccttggtgggaccacccctcccagggttagttaatttctagagtcagtaaaccacttgtcctcaa- i macFas5.chr19 I 354 C 0 s papAnu2.chr19 47025548 176 + 51301725 GCTTTTCCATTTTCTACTGCACTTGGGGACTATCTCGTCCACCTCTCTGTATTAACCACCATGTCTTTCATTTTCTGCATttgatgctttgacatcttgggGCCTTGCTGCCCTTGGTGGGACCACCCCTCCCAGGGTTAGTTAATTTCTAGAGCCAGTAAACCACTTGTCCTCAA- i papAnu2.chr19 T 14866 C 0 s chlSab2.chr6 46739572 161 + 50890351 GCTTTTCCATTTTCTACTGCACTTGGGGACTATCTCATCCATCTCTCTGTA---------------ttcattttctgcatttgatgctttgacatcttggggccttgctgcccttggtgggaccacccctcccagggttagttaatttctagagccagtaaaccacttgtcctcaa- i chlSab2.chr6 I 457 C 0 s canFam3.chr1 19474002 168 - 122678785 GCATCCACA-TTTCCAATGCACCTGGGGTCATTCTTACCCATCTCt--atatta---accacatcttttattttctgtattcaacactttgatatcttgggaccttgctgacccta--gagatatcccctctcaagg-tatccacttcctagagaaaggagacaactttccctcaag i canFam3.chr1 C 0 I 137 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=362884.000000 s hg38.chr19_GL949747v2_alt 30381 175 + 729520 --------gatgtccctcaaatgcaagccaatagatccagagcccatactctcaaccaccttaattatggggctctcacactcaaggtcaatgttgtcctctcctaatcaccccaggtccaagaactagacaaccagggacagcctctacaccccaaagccaattctttttttgtttttcttt s panTro4.chr19 58967152 175 + 63644993 --------gatgtccctcaaatgcaagccaatagatccagagcccacactctcaaccaccttcattatggggctctcacactcaaggtcaatgttgtcctctcctaatcaccccaggtccaagaactagacaaccagggacagcctctacaccccaaagccaattctttttttctttttcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833761 175 + 60714840 --------tatgcccctcaaatgcaagccaatagatccagatcccacactccaaaccaccttcattatggggctctcacactcaaggtcaatgttgtcctctcctaatcaccccaggtccaagaaatagacaaccagggacagcctctataccccaaagccaattctttttttctttttcttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59890064 175 + 64156825 --------tatgtccctcaaatgcaagccaatagatccagagccctcattcccaaccaccttcattatgaggctctcacactcaaggtgaaagttgtcctctcctaatcaccccaggtccaagaactagacaaccagggacagtctctataccccaaagccaattctttttttttttcttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54907255 175 + 59248254 --------tatgtccctcaaatgcaagccaatagatccagagccctcactcccaaccaccttcattatgaggctctcacactcaaggtgaaagttgtcctctcctaatcaccccaggtccaagaactagacaaccagggacagtctctataccccaaagccaattctttttttttttcttttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47025724 175 + 51301725 --------TATGTCCCTCAAATGCAAGCCAATAGATCCAGAGCCCTCACTCCCAACCACCTTCATGATGAGGCTCTCACACTCAAGGTGAAAGTTGTCCTCTCCTAATCACCCCAGGTCCAAGAACTAGACAACCAGGGACAGTCTCTATACCCCAaagcccattcttttttttttttctttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46739733 172 + 50890351 --------tatgtccctcaaatgcaagccaatagatccagagccctcactcccaaccaccttcattatgaggctctcacactcaaggtgaaagttgtcctctcctaattaccccaggtccaagaactagacaaccagggacagtctctataccccaaagccaattcttttttcttttttt--- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19474307 181 - 122678785 gatgCAAgcacccttcttaagtgcaaaacaaccaatccagagctcatacttccaaccacctcctctat--ggctctcacactctgggccagggttcccctgccctaatcacttcagggccagataccagacagtcagggacagcatctataccccatagttaatcctaagcctgttccttctt i canFam3.chr1 I 137 I 1 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=576564.000000 s hg38.chr19_GL949747v2_alt 30556 351 + 729520 tctttct--------ttcttttcttttctttt-cttttttttt---ttttttttttttttttgagacaggttctcattctatcacccaggcttgagtgcagtggcacgatcttggctcaccgcagcctctgcctctggggttcaagcaattctcgtgcctcagcctcccgagtagctgaaagcacaggtgcacaccaccacacccaggtaattattgtatttttgtagagatggagtttcgccatgttacccaggctgatgtcaaactcctgacctcaggtgatccaccctcctaggcctcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctaatcttgttctccc s panTro4.chr19 58967327 355 + 63644993 tctttct--------ttcttttcttttctttttcttttcttttcttttttttttttttttttgagacaggttctcattctatcacccaggcttgagcacagtggcatgatcttggctcacggcagcctctgcctccggggttcaagcaattctcgtgcctcagcctcccaagtagctgaaagcacaggtgcacaccaccacacccaggtaattattgtatttttgtagagatggggtttcgccatgttacccaggctgatgtcaaactcctgacctcaggtgatccgccctcctaggcctcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctaatcttgttctccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833936 363 + 60714840 tctttcttttctttcttcttttcttttctttttcttttttttttttttttttttttttttttgagacaggttctcattctatcacccaggcttgagtgcagtggcacaatcttggcttactgcagcctctgcctcctgggttcaagcaattctcatgcctcagcctcccaagtagctgaaagcacaggtgcacaccaccacacccaggcaattattgtatttttgtagagatggggtttcgccatgttacccaggctgatgtcaaactcctgacctcaggtgatccgccctcctcggcctcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctaatcttgttctccc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59890239 313 + 64156825 t--------------------------------------------------tttttttttttgagacaggttctcattctatcacccaggcttgaatgcagtggcacgatcttggctcaccgcagcctctgcctcctgggttcaagcaattctcgtgcctcagtctcccaagtagctgaaagcacaagtgcacaccaccacacccaggtaattattatatttttgtagagatggagtttcgccttgttacccaggctgatgtcacactcctgacctcaggtgatccgccctcctcggcttcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctaatcttgttctccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54907430 313 + 59248254 t--------------------------------------------------tttttttttttgagacaggttctcattctatcacccaggcttgaatgcagtggcacgatcttggctcaccgcagcctctgcctcccaggttcaagcaattctcgtgcctcagtctcccaagtagctgaaagcacaagtgcacaccaccacacccaggtaattattatatttttgtagagatggagtttcgccttgttacccaggctgatgtcacactcctgacctcaggtgatccgccctcctcggcttcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctaatcttgttctccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47025899 348 + 51301725 ttctttc--------tttctttcttttttctttcttttc-------ttttctttttttttttgagacaggttctcattctatcacccaggcttgaatgcagtggcacaatcttggctcactgcagcctctgcctcccgggttcaagcagttctcgtgcctcagtctcccaagtagctggaagcacaagtgcacaccaccacacccaggtaattattgtatttttgtagagatggaatttcgccatgttacccaggctgatgtcaaactcctgacctcaggcgatccgccctcctcggcttcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctAATCTTGTTCTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46739905 312 + 50890351 ---------------------------------------------------tttttttttttgagacaggttctcattctatcacccaggcttgaatgtagtagcacgatcttggctcaccgcagcctctgcctcccgggttcaagcaattctcgtgcctcagtctcccaagtagctgaaagcacaagtgcacaccaccacacccaggtaattattgtatttttgtagagatggagtttcaccatattacccaggctgatgtcaaactcctgacctcgggtgatccgccctcctcggcttcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctaatcttgttctccc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19474488 1 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=274550.000000 s hg38.chr19_GL949747v2_alt 30907 144 + 729520 cacaaaatacaatcaaagctctggtccacagttcttcctcctccctctgc-ccctcattgaccctggtgcttccccacatactcc-----ccccagtatagccttcctcctcctcttgggaactg-taacagacca---tcttttccatggcaa s panTro4.chr19 58967682 146 + 63644993 cacaaaatacagtcaaagctctggtccacagttcttcctcctccctctgc-ccctgattgaccctggtgcttccccccatacccc---acccccagtatagccttcctcctcctcttgggaactg-taacagacca---tcttttccatggcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55834299 146 + 60714840 cgcaaaatacaatcaaagctctggtccacagttcttcctcctccctctgc-ccctgattgaccctggggcttccccccatacccc----cccatagtatagggttcctcctcctcttgggaactgttaacagacca---tcttttccatggcaA i ponAbe2.chr19 C 0 M 1306 s rheMac3.chr19 59890552 145 + 64156825 cacaaaatacaatcaaagctctggcccacag---ttcctccttcctctgc-ccctgattgaccctggtgcttcccc-catacccccacccccatagtatagccttccccctcctcttgggaactg-taacagacca---tcttttccatggcaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54907743 145 + 59248254 cacaaaatacaatcaaagctctggcccacag---ttcctccttcctctgc-ccctgattgaccctggtgcttcccc-catacccccacccccatagtatagccttccccctcctcttgggaactg-taacagacca---tcttttccatggcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026247 148 + 51301725 CACAAAATACAATCAAAGCTCTGGCCCACagttcttcctccttcctctgc-ccctgATTGACCCTGGTGCTTcccc-catacccccacccccATAGTATAGCCTTCCCCCTCCTCTTGGGAACTG-TAACAGACCA---TCTTTTCCATGGCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740217 146 + 50890351 cacaaaatacagtcaaagctctggcccacagttcttcctccttcctctgc-cc--gattgaccctggtgcttcccc-catacccccacccccatagtatagccttccccctcctcttgggaactg-taacagacct---tcttttccatggcaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19474489 145 - 122678785 cagaaaccacagtaaaggctcttgccta---gtcttatccctccctctgcttcctcactgaccctgatacttctctatatggccc----tgtatggcatggcatacc-cctcttcttgggaagtc-taacaaactatgtttttttcaatgacag i canFam3.chr1 I 1 C 0 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=25604.000000 s hg38.chr19_GL949747v2_alt 31051 24 + 729520 tcatcacttg------------------------------gtctgtcagtctta-- s panTro4.chr19 58967828 24 + 63644993 tcatcacttg------------------------------gtctgtcagtctta-- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59890697 24 + 64156825 tcatcgcttg------------------------------gtttgtcagtctta-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54907888 24 + 59248254 tcatcgcttg------------------------------gtttgtcagtctta-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026395 24 + 51301725 TTATCGCTTG------------------------------GTTTGTCAGTCTTA-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740363 24 + 50890351 tcatcgcttg------------------------------gtttgtcagtctta-- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19474634 56 - 122678785 tcatctcttaaaaaaaaaaaaaaaaaaaaaaaaGACAGTCATCTCTTCATCTTTGA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55834445 1306 + 60714840 M e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=254051.000000 s hg38.chr19_GL949747v2_alt 31075 134 + 729520 -----ccatacccc-aatTTTCTATTAACTGACCATATTCTACACCACCCTCCCACATCCACATCATTGGGACCCTCTCAGAA------TCTCTGATGAGAATCTTGCTCCACATTC-GGTTCCCATTTC----------CACATTGAAGGTGTTGC s panTro4.chr19 58967852 134 + 63644993 -----ccatacccc-aatTTTCTATTAACTGACCATATTCTACACCACCCTCCCACATCCACATCATTGGGACCCTCTCAAAA------TCCCTGATAAGAATCTTGCCCCACATTC-GGTTCCCATTTC----------CACATTGAAGGTGTTGC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59890721 141 + 64156825 -----ccgtaccct-aatTTTCTATTAACTGACCATATTCTACACCACCCTCCCACATCCACATCATTGGGACCCTCTCAGAATCCCTGTCCCTGATGAGAATCTTGCCCCACGTTCGGGTTCCCATTTC----------CACACTGAAGGTATTGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54907912 141 + 59248254 -----ccgtaccct-aatTTTCTATTAACTGACCATATTCTACACCACCCTCCCACATCCACATCATTGGGACCCTCTCAGAATCCCTGTCCCTGATGAGAATCTTGCCCCACGTTCGGGTTCCCATTTC----------CACACTGAAGGTATTGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026419 137 + 51301725 -----CCGTACCCT-AATTTTCTATTA----ACCATATTCTACACCACTCTCCCACATCCACATCATTAGGACCCTCTCAGAATCCCTGTCCCTGATGAGAATCTTGCCCCACGTTCGGGTTCCCATTTC----------CACACTGAAGGTATTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740387 141 + 50890351 -----ccgtaccct-aatTTTCTATTAACTGACCATATTCTACACCACTCTCCCACATCCACATCATTGGGACCCTCTCAGAATCCCTGTCCCTGATGAGAATCTTGCCCCACGTTCGGGTTCCCATTTC----------CACACTGAAGGTATTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45318560 130 + 49145316 -----CTGTACCCC-CATTTTCTATTG----ACCGTATTCTACACCACTCTGCAGCATCCACATCATTGGGACCCTCTCACAA------TCCCTGATGGGAATCTTGCCCCACATTC-CGTTCCCATTTC----------CACATTTAAGATGTCGC i calJac3.chr22 I 3697 C 0 s canFam3.chr1 19474690 149 - 122678785 CCATACTGTACCTCAAATTTTCTATTGGCA-TCTATATTCTAAAACACTCTCCCACATCCACCTCATTGATACATACTCATAA------TCTTTGATGAGAGCCTGTCCCCACACTC-ACTTCCCATTTCTCCCATACTTTACACCCAAGTGGTCAC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I a score=516.000000 s hg38.chr19_GL949747v2_alt 31209 2 + 729520 AT- s panTro4.chr19 58967986 2 + 63644993 AT- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59890862 2 + 64156825 AT- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54908053 2 + 59248254 AT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026556 2 + 51301725 At- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740528 2 + 50890351 AT- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19474839 2 - 122678785 -TC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55834445 1306 + 60714840 M e calJac3.chr22 45318690 0 + 49145316 C e nomLeu3.chr10 102598098 717 - 106955855 I a score=327264.000000 s hg38.chr19_GL949747v2_alt 31211 321 + 729520 CTATCCttcttcttctt--------ttttttttttagacggagtcttgctctttcatccaggctgcagtgcagtggcacaatctcagctcattacaacctctgccttctgggctcaagagattctcttcctgcctcagcctccctagtagctgggattacaggcgcctgccaccacgcccagctaatttttgtattttaa------------------------------------------------------------gtagaggtgaggtttcaccatgttggccaggctggtctcgaactcccgacctcaagtgat------------------------------ctgcccacctctgcctcccaaagtgctgggattacaggcatgagccaccgcgccGTGCCTGGCCTGCAT s panTro4.chr19 58967988 329 + 63644993 CTATCCttcttcttcttcttcttttttttttttttagacagagtcttgttctttcatccaggctgcagtgcagtggcacaatctcagctcattacaacctctgccttctgggctcaagggattctcctcctgcctcagcctccctagtagctgggattacaggcacctgccaccacgcccagctaatttttgtattttaa------------------------------------------------------------gtagaggtgaggtttcaccatgttggccaggctggtctcgaactcccaacctcaagtgat------------------------------ctgcccacgtctgcctcccaaagtgctgggattacaggcatgagccactgcgccGTGCCTGGCCTGCAT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59890864 315 + 64156825 CTATCC----ttttttt--------tttttttttgagacggagtcttgctctttcatccaggctggagtgcagtgacacaatctcggctcattacaacctctgcctactgggttcaagtgattctcctcctgcctcagcctccctagtagctgggattacaggtgccc--------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgcccacctctgcctcccaaagtgctgggattacaggcgtgagccaccgcgccGTGCCCGGCCTGCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54908055 318 + 59248254 CTATCC---tttttttt--------tttttttttgagacagagtcttgctctttcatccaggctggagtgcagtgacacaatctcggctcattacaacctctgcctactgggttcaagtgattctcctcctgcctcagcctccctagtagctgggattacaggtgcccaccaccacacccagctaatttttgtattttta------------------------------------------------------------gtagagttgaggtttcaccatgttggccagactggtctcgaactcctgacctcaagtgat------------------------------ccgcccacctctgcctcccaaagtgctgggattacaggcgtgagccaccgcgccGTGCCCGGCCTGCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026558 312 + 51301725 ctatcc---------ct--------tttttttttgagacggagtcttgctctttcatccaggctggagtgcagtgacacaatctcggctcattacaacctctgcctactgggttcaagtgattctcctcctgcctcagcctccctagtagctgggattacaggtgcccaccaccacacccagctaatttttgtattttta------------------------------------------------------------gtagagttgaggtttcaccatgttggccagactggtctcgaactcctgacctcaagtgat------------------------------tcgcccacctctgcctcccaaagtgctgggattacaggcgtgagccaccgcaccgtgcccagcctgcat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740530 320 + 50890351 CTATCCtt-tttttttt--------tttttttttgagacggagtcttgctctttcatccaggctggagtgcagtggcacaatctcggctcattacaacctctgcctactgggttcaagtgattctcctcctgcttcagcctccctagtagctgggattacaggtgcccgccaccacacccagctaatttttgtattttta------------------------------------------------------------gtagagttgaggtttcaccattttggccagactggtctcaaactcctgacctcaagtgat------------------------------ccacccacctctgcctcccaaagtgctccgattacaggcgtgagccaccgcaccgtgcccggccTGCAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19474841 0 - 122678785 C e ponAbe2.chr19 55834445 1306 + 60714840 M e calJac3.chr22 45318690 0 + 49145316 C e nomLeu3.chr10 102598098 717 - 106955855 I a score=4011.000000 s hg38.chr19_GL949747v2_alt 31532 2 + 729520 CT s panTro4.chr19 58968317 2 + 63644993 CT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59891179 2 + 64156825 CT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54908373 2 + 59248254 CT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026870 2 + 51301725 cT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740850 2 + 50890351 CT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19474841 2 - 122678785 CT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55834445 1306 + 60714840 M e calJac3.chr22 45318690 0 + 49145316 C e nomLeu3.chr10 102598098 717 - 106955855 I a score=145492.000000 s hg38.chr19_GL949747v2_alt 31534 71 + 729520 ATCTTTTTGTCTCCTAGATTCCTTCTTCCCCAGCCATGTCCCACGACAG---GAAAAGAAATACGTGCATCAGG s panTro4.chr19 58968319 71 + 63644993 ATCTTTTTGTCTCCTAGATTCCTTCTTCCCCAGCCATGTCCCACGACAG---GAAAAGAAATACGTGCATCAGG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59891181 71 + 64156825 ATCTTTTTGTCTCCTGGGTTCCTTCTTCCCCAGCCACGTCCCACAACAG---GAAAAGAAATACGTGCATCAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54908375 71 + 59248254 ATCTTTTTGTCTCCTGGGTTCCTTCTTCCCCAGCCACGTCCCACAACAG---GAAAAGAAATACGTGCATCAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026872 71 + 51301725 ATCTTTTTGTCTCCTGGGTTCCTTCTTCCCCAGCCATGTCCCacaacag---gaaaagaaatacGTGCATCAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740852 71 + 50890351 ATCTTTTTGTCTCCTGGGTTCCTTCTTCCCCAGCCACGTCCCACAACAG---TAAAAGAAATACGTGCATCAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45318690 74 + 49145316 ATGTTTTTGTCTCCTGGGTTCCTTCCTTCCCAGTCACATCCCCCAACAGAAAAAAAAAAAAAACTCACATCAgg i calJac3.chr22 C 0 C 0 s canFam3.chr1 19474843 71 - 122678785 GTCTTTTTGTTTCCTGGATTCTTCTTTCACCAACCAGGCTCCATCACAA---GAAAAGGACTATATGCCTCAAG i canFam3.chr1 C 0 I 8 e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I a score=4011.000000 s hg38.chr19_GL949747v2_alt 31605 2 + 729520 CA s panTro4.chr19 58968390 2 + 63644993 CA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59891252 2 + 64156825 CA i rheMac3.chr19 C 0 I 397 s macFas5.chr19 54908446 2 + 59248254 CA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026943 2 + 51301725 CA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740923 2 + 50890351 CA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45318764 2 + 49145316 ca i calJac3.chr22 C 0 C 0 e canFam3.chr1 19474914 8 - 122678785 I e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I a score=146770.000000 s hg38.chr19_GL949747v2_alt 31607 110 + 729520 GGCTTTggtgactcacgcctgtaatcccagcactttgggaggccaaggcaggaggatcacctgagctcaggagttcaagaccagcctgggcaacat----agatcctgtctcaa s panTro4.chr19 58968392 110 + 63644993 GGCTTTggtgactcacgcctgtaatcccagcactttgggaggccaaggcaggaggatcacctgagctcaggagttcaagaccagcctgggcaacat----agatcctgtctcaa i panTro4.chr19 C 0 C 0 s macFas5.chr19 54908448 110 + 59248254 GGCTTTggtgactcacgcctgtaatcccagcactttgggaggccaaggcaggaggatcacctgagctcaggagttcaagactagcctgggcaacat----agatcctgtctcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026945 110 + 51301725 GGCtttggtgactcacgcctgtaatcccagcactttgggaggccaaggcaggaggatcacctgagctcaggagttcaagaccagcctgggcaacat----agatcctgtctcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740925 110 + 50890351 GGCTTTggtgactcacgcctgtaatcccagcactttgggaggccaaggaaggaggatcacctgaactcaggagttcaagaccagcctgggcaacat----agatcctgtctcaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45318766 114 + 49145316 ggcctcggtgactcaagtctgtaatcccagcactttgagaggccaaagcagaaggataacctgagctcaggagttcaagaccagcctgggcaatatagagagatcctgtctcaa i calJac3.chr22 C 0 I 926 e canFam3.chr1 19474914 8 - 122678785 I e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I e rheMac3.chr19 59891254 397 + 64156825 I a score=426628.000000 s hg38.chr19_GL949747v2_alt 31717 458 + 729520 caagtaatttaaaaattagccaggcatggtggtgcttgcctgtactcccagctacttgggaggctgatgtgggaaaatcgcttgagcctgggaggtcgaggctgcagtgaattgtgttcatgccactgcactcctgcctgggtgacagagcgagattctgt--caaaaaaaaaaaaa---------GCA-----gccgagcgcagtggctcactcctgtaatctcagcactttgggaggctgaggtgggcagatcacttgaggtcagcagttcgagat-------------------------------cagcctggccaacatggtaaaaccctgtctctactaaaatacaaaaattagccaggtgtggtggcgcacccctgtagttccagctactcgggaggctgaggcaggtgaattgcatgaacccaggaggcgggggttgcagtgagctgagatcatgccactgtactccagcctgggcaacagagcaagactccctctc s panTro4.chr19 58968502 456 + 63644993 caagtaatttaaaaattagccaggcacggtggtgcttgcctgtactcccagctacttgggaggctgatgtgggaaaattgcttgagcctgggaggtcgaggctgcagtgaattgtgttcatgccactgcactcctgcctgggtgacagagagagattctgt--caaaaaaaaaaa-----------GCA-----gccgagcgcagtggctcactcctgtaatctcagcactttgggaggctgaggtgggcagatcacttgaggtcagcagttcgagat-------------------------------cagcctggccaacatggtaaaaccctgtctctactaaaatacaaaaattagccgggtgtggtggcgcacccctgtagttccagctactcgggaggctgaggcaggtgaattgcatgaacccaggaggcgggggttgcaatgagctgagatcatgccactgtactccagcctgggcaacagagcaagactccctctc i panTro4.chr19 C 0 C 0 s macFas5.chr19 54908558 460 + 59248254 caaatactttaaaaattagccaggcgtggtggtgcttgcctgtactcccagctacttgggaggctgatgtgggaaaattgcttgagcctgggaggtcgaggctgcagtgaattgtgtgcatgccactgcactcctgcctgggcgacagagcgagattctgt--caaaaaaaaaaaaaaaaacaaaaacaaaaCCGCCAAGCGCAGTGGC------------tcccagcactttgggaggctgagatgggcagatcacttgaggtcagcagttcgagat-------------------------------cagtctgaccaacatggtaaaaccctgtctctactaaaatacaaaaattagcccggtgtggtggtgcacccctgtagtttcagctactcgggaggctgaggcaggtgaattacatgaacccaggaggcggagattgcagtgagctgagatcatgccactgcactctagcctaggcgacagagcaagactgcctctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47027055 467 + 51301725 caaatactttaaaaattagccaggcgtggtggtgcttgcctgtactcccagctgcttgggaggctgatgtgggaaaattgcttgagcctgggaggttgaggctgcagtgaattgtgttcatgccactgtactcctgcctgggcgacagaacgagattctgt--caaaaaaaaaaaaa-----aaaaacaaagcagccaagcgcagtggcttactcccgtaatcccagcactttgggaggctgaggtgggcagatcacttgaggtcagcagtttgagat-------------------------------cagcctgaccaacatggtaaaaccctgtctctactaaaatacaaaaattagcccggtgtggtggtccacccctgtagtttcagctactcgggaggctgaggcaggtgaattacatgaacccaggaggcggagattgcaatgagctgagatcacgccactgcactccagcctaggcgacagagcaagactgcctctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46741035 464 + 50890351 caaataatttaaaaattagccaggcgtggtggtgcttgcctgtactcccagctacttgggaggctgatgtgggaaaattgcttgagcctgggaggtcgaggctgcagtgaattgtgttcatgccactgcactcctgcctgggcgacagagcaagattctgtaccaaaaaaaaaaaaa-----aaaGACA-----gccaagcgcggtggcttactcccgtaatcccagcactttgggaggctgatgtgggcagatcacttgaggtcagcagttcgagat-------------------------------cagcctgaccaacatggtaaaaccctgtctctactaaaatacaaaaattagcccggtgtggtggtccacccctgtagtttcagctactcgggaggctgaggcaggtgaattacatgaacccaggaggtggagattgcaatgagctgagatcatgccactgcactccagcctaggcgacagagcaagactgcctctc i chlSab2.chr6 C 0 I 2703 s calJac3.chr22 45319806 421 + 49145316 caaaaAAAC--AAAAGCAgccaggcacagtggctcactcctgtaattcccgcaatttgggaggctgaggcaggcaaatcatgtgaggtcaggagttcaaaa-------------------------------tcagcctcactaacatggtgaaaccctac--taaaatacaaaaat----------ta-----gctgggtgtggtggcacagccctgtagtcccagctactcgggaggctgaggtag---aagtgcttgaactcaggaggtggaggtttcagtaagctgagattgtgtcactgcactccagcttgggagacagagcaagacaaccactcaaaaaaaaaaaaaaaaaTGGTTTGGAGAggtggctcacacgtgttaatcccgccctttgggagcctgtggtgagtggatcacctgaggtcaggagtttgagat-------------------------------cagcctcaccagtatggtgaaacctcatctc i calJac3.chr22 I 926 I 5 e canFam3.chr1 19474914 8 - 122678785 I e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I e rheMac3.chr19 59891254 397 + 64156825 I a score=8898.000000 s hg38.chr19_GL949747v2_alt 32175 27 + 729520 aaaaaaaaaaaaaag-------------gctgggtgtgga s panTro4.chr19 58968958 32 + 63644993 aaaaaaaaaaaaaaaaaa--------aagctgggtgtgga i panTro4.chr19 C 0 C 0 s macFas5.chr19 54909018 29 + 59248254 aaaaaaaaaaaaaaa-----------aTgccgagcacggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47027522 40 + 51301725 aaaaaaaaaaaaaaaaaaaaaaaaacacgccgggcactgt i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45320232 27 + 49145316 --aaaaacaaaaatt-----------gggccaggcgaggt i calJac3.chr22 I 5 C 0 e canFam3.chr1 19474914 8 - 122678785 I e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I e chlSab2.chr6 46741499 2703 + 50890351 I e rheMac3.chr19 59891254 397 + 64156825 I a score=100170.000000 s hg38.chr19_GL949747v2_alt 32202 87 + 729520 ggttcacgtttataatcccagccctttgggaggccgaggcagatggatcacttgaggtcaggagtttgagatcaacctcaccaatat s panTro4.chr19 58968990 87 + 63644993 ggttcacgtttataatcccagccctctgggaggccgaggcagatggatcacttgaggtcaggagtttgagatcaacctcaccaatac i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59891651 87 + 64156825 ggttcacgtttgtaatcccagccctttgggaggccaaggcagatggatcacctgagatcaggagtttgagatcaacctcaccagtat i rheMac3.chr19 I 397 C 0 s macFas5.chr19 54909047 87 + 59248254 ggttcacgtttgtaatcccagccctttgggaggccaaggcagatggatcacctgagatcaggagtttgagatcaacctcaccagtat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47027562 87 + 51301725 ggttcacgtttgtaatcctagccctttgggaggccaaggcagatggatcacctgagatcaggagtttgagatcaacctcaCCAGTAT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45320259 84 + 49145316 ggctcacacctgtaatcc-agcactttgggaggccaaggcggatggatcac--aaggtcaagagatcgagaccatcctagtcaacat i calJac3.chr22 C 0 C 0 e canFam3.chr1 19474914 8 - 122678785 I e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I e chlSab2.chr6 46741499 2703 + 50890351 I a score=183878.000000 s hg38.chr19_GL949747v2_alt 32289 124 + 729520 ggtacaacctcatctttattaaaaatacaaaaatta-ggccgggcgcggtggctcatgcctgtaatcccagcactttgggaggcggaggcaggtggatcac--aaggtcaggagatggaga-------------------------------ccatcc s panTro4.chr19 58969077 124 + 63644993 ggtataacctcatctttattaaaaatacaaaaatta-ggccgggcgcggtggctcatgcctgtaatcccagcactttgggaggccgaggcaggtggatcac--aaggtcaggagatggaga-------------------------------ccatcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55835751 125 + 60714840 GGTATAACCTCGTCTTTATTAAAAATACAAAAATTACCgctgggcgcggaggctcacgcctgtaatcccagcactttgggaggctgaggcaggtggaccac--gaggtcaggagatggaga-------------------------------ccatcc i ponAbe2.chr19 M 1306 C 0 s rheMac3.chr19 59891738 124 + 64156825 ggtacaaccacgtctttattaaaaatacaaaaatta-ggccaggctcggtggctcacacctataatcccagcactttgggaggccgaggtgggcggatcac--gaggttaggagatggaga-------------------------------ccatcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54909134 124 + 59248254 ggtacaaccacgtctttattaaaaatacaaaaatta-ggccaggctcggtggctcacacctataatcccagcactttgggaggccgaggtgggcggatcac--gaggttaggagatggaga-------------------------------ccatcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47027649 124 + 51301725 GGTACAACcacgtctttattaaaaatacaaaaatta-ggccaggcgcggtggctcacacctgtaatcccagcactttggaaggccaaggcaggcggatcac--gaggtcaggagatggaga-------------------------------ccatcc i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45320343 156 + 49145316 ggtgaaaccctgtctgtagtaaaaatacaaaaatta--gctgggcatggtggcgcacgcctgtaatcccagctactcgggaggctgaggcaggagaattgcctgaacccaggaggcggaggttgcggtgagccgagatcgcgccattgcactccagcc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19474914 8 - 122678785 I e nomLeu3.chr10 102598098 717 - 106955855 I e chlSab2.chr6 46741499 2703 + 50890351 I a score=471255.000000 s hg38.chr19_GL949747v2_alt 32413 226 + 729520 tggctaacatg-gcgaaaccccatctctacta--------------aaaacacaaacaattagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggagggagaattgcttgaacccaggaggcagaagttgcagtgagccgagatcgtgccactgcactccagcctgggagacacagcaagactctgtctta----aaaaaaaaaaa----------------gcaaaGCCAAACCAAAGAAAT s panTro4.chr19 58969201 240 + 63644993 tggctaacatg-gcgaaaccccatctctacta--------------aaaacacaaacaattagccgggcgtggtggcgggcgcctgtagtcccaactactcgggaggctgaggagggagaattgcttgaacccaggaggcagaggttgcagtgagccgagatcgtgccactgcactccagcctgggagacacagcaagact--gtctta----aaaaaaaaaaaaaaaaaaaaaaaaaaaGCAAAGCCAAACCAAAGAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55835876 226 + 60714840 tggctaacatg-gtgaaaccccatctctacta--------------aaaacacaaacaattagccaggcgtggtggcgggtgcctgtagtcccagctactcgggaggctgaggcgggaggattgcttgaacccaggaggcggaggttgcagtgagccgagatcgtgccactgcactccagcctgggtgacacagcaagactctgtcttt----aaaaaaaaaaa----------------gcaaagcaaaaccaaagaaaT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59891862 237 + 64156825 tggctaacacg-gtgaaaccccatctctacta--------------aaaacacaaa-aagtagccgggcgtggtggcgggagcctgtagtcccagctactcgggaggctggggaggaagaattgcttgaacccaggaggcagaggttgcagtgagccgagattgtgccactgcactccagcccaggcgacagagcaagactctgtcttg--aaaaaaaaaaaaa------ggaaaaaaaaacaaaGCAAAACCGAAGAAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54909258 235 + 59248254 tggctaacacg-gtgaaaccccatctctacta--------------aaaacacaaa-aagtagccgggcgtggtggcgggagcctgtagtcccagctactcgggaggctggggaggaagaattgcttgaacccaggaggcagaggttgcagtgagccgagattgtgccactgcactccagcccaggcgacagagcaagactctgtcttg----aaaaaaaaaaa------ggaaaaaaaagcaaaGCAAAACCGAAGAAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47027773 235 + 51301725 tggctaacacg-gtgaaaccccatctctacta--------------aaaacacaaa-aagtagccgggcatggtggcgggagcctgtagtcccagctactcgggaggctgcggaggaagaactgcttgaacccaggaggcagaggttgcagtgagccgagattgtgccactgcactccagcctgggcgacagagcaagactctgtcttg----aaacaaaaaaa------ggaaaaaaaagcaaagcaaaaccgAAGAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46744202 238 + 50890351 tggctaacacg-gtgaaaccccatctctacta--------------aaaacacaaa-aaatagccgggcgtggtggcaggagcctgtagtcccagc-actcgggaggctggggaggaagaattgcttgaacccaggaggcagaggttgcagtgagccgagattgtgccactgcactccagcctgggtggcagaacaagactctgtcttgaaaaaaaaaaaaaaa------gaaaaaaaaaGCAAAGCAAAACCGAAGAAAT i chlSab2.chr6 I 2703 C 0 s calJac3.chr22 45320499 231 + 49145316 tgggtaacaagagcgaaactccatctcaaaaaaaagaaaagaaaagaaaatacaaa-aactagccgggtgtggtg---ggcacttgaaatcccggctactcaggaggctgaggtaggagaatggcttgaatgcaggaggcagaggttgcagtgggcca----------actgcactccagcctgggcgacagagcgagactctatctca----aaaaaaaaaaa----------aaaaaagcaaaGCCAAACCAAAGAC-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19474914 8 - 122678785 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=42582.000000 s hg38.chr19_GL949747v2_alt 32639 15 + 729520 GTGTGCATCAAAGAG s panTro4.chr19 58969441 15 + 63644993 GTGTGCATCAAAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836102 15 + 60714840 GTGTGCATCAAAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102598815 15 - 106955855 GTGTGCATCAAAGAG i nomLeu3.chr10 I 717 C 0 s rheMac3.chr19 59892099 15 + 64156825 GTGTGCATCAAGGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54909493 15 + 59248254 GTGTGCATCAAGTAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028008 15 + 51301725 GTGTGCATCAAGGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46744440 15 + 50890351 GTGTGCATCAAGGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45320730 14 + 49145316 GTGTGTATCAA-GAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19474914 8 - 122678785 I a score=1852457.000000 s hg38.chr19_GL949747v2_alt 32654 571 + 729520 TACAT------CTGCCCTTCTCACCTGTGACCACCAGCTGCAAGTGTTCACTGCTTTCTGACCACTCATGGGAGGCTGTTGTCTTGTAGGCACAAAAGTACCTCCCAGCATCCTTAGGCTTCAGGTCCGTGAAGGGGAATTCAGCTTCGTTTTCTGCCGAGCTCTGTTCCTGCTTGTACCCAGAGTCGTTCACCTTGCGCAGCACAAATGTCACATTCTGGGAATGAGCCTGACACTTCAGGGTCACATTGCTCTCGGCTTCAACCACCG-AGCTGGGCCAGGCGTGGAGGGAGGGCTTGGGCGGTTTCTCTGG-AAACAATTCAGAGTTAATTTGAGT----------------------------CTAGAATT-CAGACGATTAAAGGAAAA-GGTCATGAAGCGTGGGATGCAGGAATAAA---AGTTTAAGTAGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACA-GCCCTGGAAGAGAAATCTCAATGAGAGAAAAATTATGTGCTTGTCCTTGAGTACAAATCCAGCAGAGAACGTATGACTAGCTCTTTATAGGTCTGAGatatatatatatatata--------atgt---------------------------------------------------------------------------------atatatgtatt s panTro4.chr19 58969456 586 + 63644993 TACAT------CTGCCCTTCTCACCTGTGACCACCAGCTGCAAGTGTTCACTGCTTTCTGACCACTCATGGGAGGCTGCTGTCTTGTAGGCACAAAAGTACCTCCCAGCATCCTTAGGCTTCAGGTCCGTGAAGGGGAATTCAGCTTCCTTTTCTGCCGAGCTCTGTTCCTGCTTGTACCCAGAGTCGTTCACCTTGCGCAGCACAAATGTCACATTCTGGGAATGAGCCTGACACTTCAGGGTCACATTGCTCTCGGCTTCAACCACCGGAGCTGGGCCAGGCGTGGAGGGAGGGCTTGGGCGGTTTCTCTGG-AAACAATTCAGAGTTAATTTGAGT----------------------------ATATAATTTCAGACGATTAAAGGAAAAAGGTCATGAGGAGTGGGATGCAGGAATAAATAAAGTTTAAGTAGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACAAGCCCTGGAAGAGAAATCTCAATGAGAGAAAAATTATGTGCTTGTCCTTGAGTACAAATCCAGCAGAGAACGTATGACTAGCTCGTTATAGGTCTGAGatatatatatatatatatatgtgttatgt---------------------------------------------------------------------------------atatatgtatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836117 580 + 60714840 CACATCTGAAGCTGCCCTTCTTACCTGTGACCACCAGCTGCAAGCGTTCACTGCTTTCTGACCACTCATGGGAGGCTGTTGTCTTGTAGGCACAAAAGTACCTCCCAGCATCCTTAGGCTTCAGGTCCGTGAAGGGGAATTCAGCTTGGTTTTCTGCCGAGCTCTGTTCCTGCTTGTACCCAGAGTTGTTCACCTTGCACAGCACAAATGTCACATTCTGGGAATGAGCCTGACACTTCAGGGTCACATTGCTCCCGGCTTCAACCACCG-AGCTGGGCCAGGCGTGGAGGGAGGGCTTGGGCAGTTTCTCTGG-AAACAATTCAGAGTTAATTTGAGT----------------------------CTAGAATT-CAGACGATTAAAGGAAAA-GGTCATGAAGCGTGGGATGCAGGAATAAATAAAGTTTAAGTAGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACA-GCCCTGGAAGAGAAATCTCAATGAGAGAAAAATTATGTGCTTGTCCTTGAGTACAAATCCAGCAGAGAATGTATGACTAGCTCGTTATAGGTCTGAGatatatatatatgtatt--------atgt---------------------------------------------------------------------------------atatatgtatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102598830 572 - 106955855 TACATCTGAGGCTGCCCTTCTCACCTGTGACCACCAGCTGCAAGTGTTCACTGCTTTCTGACCACTCATGGGAGGCTGTTGTCTTGTAGGCACAAAAGTACCTCCCAGCATCCTTAGGCTTCAGGTCTGTGAAGGGGAATTCGGCTTCATTTTGTGCCGAGCTCTGTTCCTGCTTGTACCCAGAGTCGTTCACCTTGCGCAGCACAAATGTCACATTCTGGGAATGAGCCTGACACTTCAGGGTCACATTGCTCTCGGCTTCAACCACCG-AGCTGGGCCAGGCATGGAGGGAGGGCTTGGGCGGTTTCTCTGG-AAACAATTCAGAGTTAATTTGAGT----------------------------CTAGAATT-CAGACGATTAAAGGAAAA-GGTCATGAAGCGTGGGATGCAGGAATAAATAAAGTTTAAGTAGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACA-GCCCTGGAAGAGAAATCTCAATGAGAGAAGAATTATGTGCTTGTCCCTGAGTACAAATCCAGCAGAGAACATATGACTAGCTCGTTATAGGTCTGAGatatagatatatgtatt-------------------------------------------------------------------------------------------------atgtatt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59892114 576 + 64156825 CACATCTGAGGCTA-CTTTCTCACCTGTGATCACCAGCTCCAAGTGTTCACTGCTTTCTGACCCCTCACGGGAGGCTGTTGTCTTATAGGCACAAAAGTAGCTCCCAGCATCCTCAAGCTTCAGGTCCGTGAAGTGGAATTCAGCTTCGTCTTCTGTCAAGAACTGTTCCTGCTTGTACCCAGAGTCATTCACCTTGAGCAGAATGAATGTCACATTCTTGGAAGGAGCCTGACACTTCAGGGTCACGTTGCTCCGGGCTTCAACCACCG-AGCTAGGCCAGGCGTGGAGGGAGGGCTTGGGCAGTTTCTCTGG-AAAGAATTCAGAGTTAATTTGAGT----------------------------CTAGAATT-CAGACGATTAAAGGAAAA-GGTCATGAAGTGTGGGATGCAGGAATAAATAAAGTTTAAGTGGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACA-GTCCTGGAAGAGAAATCTCAATGAGAGAAAAATTATGTGCTTGTCTTTGAGTACAAATCCAGCAGAGAACA-ATGACTAGCTCATTATAGGTCT--Aatatatatatatgtatt--------atgt---------------------------------------------------------------------------------atatatgtatt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54909508 576 + 59248254 CACATCTGAGGCTA-CCTTCTCACCTGTGATCACCAGCTCCAAGTGTTCACTGCTTTCCGACCCCTCACGGGAGGCTGTTGTCTTATAGGCACAAAAGTAGCTCCCAGCATCCTCAAGCTTCAGGTCCGTGAAGTGGAATTCAGCTTCGTCTTCTGTCGAGAACTGTTCCTGCTTGTACCCAGAGTCATTCACCTTGAGCAGAATGAATGTCACATTCTTGGAAGGAGCCTGACACTTCAGGGTCACGTTGCTCCGGGCTTCAACCACCG-AGCTAGGCCGGGCGTGGAGGGAGGGCTTGGGCAGTTTCTCTGG-AAAGAATTCAGAGTTAATTTGAGT----------------------------CTAGAATT-CAGACGATTAAAGGAAAA-GGTCATGAAGTGTGGGATGCAGGAATAAATAAAGTTTAAGTGGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACA-GTCCTGGAAGAGAAATCTCAATGAGAGAAAAATTATGTGCTTGTCTTTGAGTACAAATCCAGCAGAGAACA-ATGACTAGCTCATTATAGGTCT--Aatatatatatatgtatt--------atgt---------------------------------------------------------------------------------atatatgtatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028023 658 + 51301725 CACATCTGAGGCTACCCTTCTCACCTGTGGTCACCAGCTGCAAGTGTTCACTGCTTTCTGACCACTCATGGGAGGCTGTTGTCTTGTAGGCACAAAAGTAGCTCCCAGCATCCTTAAGCTTCAGGTCCGTGAAGTGGAATTCAGCTTCGTCTTCTGTCGAGAACCGTTCCTGCTTGTACCCAGAATCATTCACCTTGCGCAGAATGAATGTCACATTCTTGGAAGGAGCCTGACACTTCAGGGTCACGTTGCTCCGGGCTTCAACCACTG-AGCTAGGCCGGGCGTGGAGGGAGGGCTTGGGCAGTTTCTCTGG-AAAGAATTCAGAGATAATTTGAGT----------------------------CTAGAATT-CAGACGATTAAAGGAAAA-GGTCATGAAGTGTGGGATGCAggaataaataaagtttaaatgggagaaaactcaccattctttttctcatcttcgTAGCCCAGACACA-GTCCTGGAAGAGAAATCTcaatgagagaaaaattatgtgctTGTCTTTGAGTACAAATCCAGCAGAGAACA-ATGACTAGCTCATTATAggtct--aatatatatatatgtatt--------atgtatatatgtattatgtatatatgtattatgtatatatgtgtacatatagttacacatatgtatatatgtattatatatatgtatatatgtatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46744455 577 + 50890351 CACATCTGAGGCTACCCTTCTCACCTGTGATCACCAGCTGCAAGCGTTCACTGCTTTCTGACCACTCATGGGAGGCTGTTGTCTTGTAGGCACAAAAGTAGCTCCCAGCATCCTTAAGCTTCAGGTCCGTGAAGTGGAATTCAGCTTCGTTTTCTGTCGAGAACTGTTCCTGCTTGTACCCAGAGTCGTTCTCCTTGAGCAGAATGAATGTCACATTCTTGGAAGGAGCCTGACACTTCAGGGTCACGTTGCTCCGGGCCTCAACCACCG-AGCTAGGCCAGGCGTGGAGGGAGGGTTTGGGCAGTTTCTCTGG-AAAGAATTCAGAGTTCATTTGAGT----------------------------CTAGAATT-CAGACAATTAAAGGAAAA-GGTCATGAAGTGTGGGATGCAGGAATAAATAAAGTTTAAGTGGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACA-GTCCTGGAAGAGAAATCTCAATGAGAGAAAAATTATGTGCTTGTCTTTGAGTACAAATCCAGCAGAGAACA-ATGACTAGCTCATTATAGGTCT--Aatatatatatatgtatt--------atgt---------------------------------------------------------------------------------atatatgtatt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45320744 584 + 49145316 CGCCTCTGAGACGGCCCTTCTCACCTGTGACCACCAGCTGCACGTGCTCACTGCTTTCTGACCACTGGTGGGAGACTGCTGTCTTGTAGGCACAAAAGTACCTCCCAGCATCCTTGGGCTTCAAGTGCATGAAGGGGAATTCCGCTTCGCTTCCTGCCGAGCTCTGTTCGCGCTGGAATGCAGAGTCGTTCACCTTGCGCAGCGTGAATGTCACATTCTGGGAAGGAGCCCGACACTTCAGGGTCACGTTGCTCTTGGCTTCAGCCACCG-AGCTGGGCCAGGCGTGGAGGGAGGGCTTGGACAGTTTCTCTGG-AAAGAATTCAGAGTTAATTCGAGTCTGCATGTGGATG-------------GCCTGGAATT-CAGAGGATTCAAGAAAAA-GGTCATGAAATGTGGGGTGCAGGAATAA----AGTGTAAGTGGGAGAAAACTCACCGTTCTCTTTGTCATCCTCATAGCCCAGACACA-GCCCTGGAAGAGAAATGTCAAT--GAGAAGAATTACGCACTTGTCTTCGAGTACAAATCCAGCAGAGAAATCATGACCAGCTCGTTACAGGTCT--GATATGTATATA---ATA--------ATGC---------------------------------------------------------------------------------ATGTATTTtat i calJac3.chr22 C 0 C 0 s canFam3.chr1 19474922 598 - 122678785 ------TGAAGCTGCCTTTCTCACCTTTGACCTGCAGCCACAGGTGTTCACTCTCTTCTGACCACTCCTGGGAGACCATTGTCTTGTAGGCACAAAAGTACATCCCAGCATCCTTCGGCTCCAGGTGAGTGAGGAGGAATTCAGCCTCATGTCCTGTGGATCTCTGCTCCTGCCTGTACCCAGAGTCCTGCAGCTTCCCCAGCATGAATGTCACATTCTGGAAGTGAGACTGGCACCTGAGGCTCACGTTGCCTCTGTGTTCAACCATGT-TGCTGGGCAAGGCACTGAGCGTGGGTTTGGGAAGCATTTCTGGCAAAGAATTCAGAGTTAGTCTGACTCTTCATCATGACATCCACCAATGCCCTCCTAGAATT-CAGAGGATTAAAGAGAAA----------ATATAGGATGCAGGAACAGATAGAGTTTA--TGCGAGAAAACTCACCATTCTTTTTCTCGTCTTCAAAGCCCAGGGAAA-GCCCTGGAAGAGAAACCCTTATGAGACATAAATTACATACTCGTGTTTGAGTATATATCAGGCAGAGAGTGCATGACTAATTTGTTAAAGATCC--ATCTTATTTCTTTtttcttttaaagatttt---------------------------------------------------------------------------------atttatttatt i canFam3.chr1 I 8 I 134 a score=111275.000000 s hg38.chr19_GL949747v2_alt 33225 74 + 729520 atatata-ataaat--------------------------gtattaagtatatgtacacatattacatata---atacatatataaatataatatatatattaa---- s panTro4.chr19 58970042 70 + 63644993 atatata-ataaat--------------------------gtattaagtata----cacatattacatata---atacatatataaatataatacatatattaa---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836697 74 + 60714840 atatata-ataaat--------------------------gtattaagtatatgtacacatattacatata---atacatatataaatataatacatatattaa---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599402 74 - 106955855 atatata-ataaat--------------------------atattaaatgtatgtacacatattatacata---atacatatataaatataatacatatattaa---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59892690 67 + 64156825 atacata-atacat--------------------------atattaac--tatgtacacatattacatata---atacatatataaatat-----atctattaa---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54910084 67 + 59248254 atacata-atacat--------------------------atattaac--tatgtacacatattacatata---atacatatataaatat-----atctattaa---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028681 95 + 51301725 atacata-atacatatgtatatatgtataatacataatacatataaactatatgtacacatattacatata---atacatatataaatat-----atctattaa---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46745032 57 + 50890351 atacata-at------------------------------atattaactctatgtacat---------------gtacatatataaatat-----atctattaaatgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45321328 71 + 49145316 aaatgtacatacat--------------------------ata-------tatgcagatataatatagatatacataaatgcatatatgtgaattatatattat---- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19475520 134 - 122678785 I a score=279390.000000 s hg38.chr19_GL949747v2_alt 33299 123 + 729520 atatatgtattacatatatgtatatatTTTTGGCAGATATCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCCATTGTTTGTCATTCAGAAGCTACGTGTATGGAGAAAATTCC-AGCAAC---ttcttc- s panTro4.chr19 58970112 125 + 63644993 atatatgtattacatatatgtatatatTTTTGGCAGATATCTCCCCAGACTTA---------CCTCTTACTTTTGGTTCCATTGTTTGTCATTCAGAAGCTACGTGTATGGAGAAAATTCCCAGCAAC---ttcttc- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836771 123 + 60714840 atatatgtattacatatatgtatatatTTTTGGCAGCTATCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCCATTGTTTGTCATTCAGAAGCTACGTGTATGGAGAAAATTCC-AGCAAC---TTCttc- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599476 122 - 106955855 acatatgtattacatatatgtatatatTTTTGGCAAATATCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCCATTGTTTGTCATTCAGAAGCTAGGTGTATGGAGAAAATTCC-AGCAAC---ttctt-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59892757 121 + 64156825 atgtatgtattacatgtatgtatatatTTTTGGCAGCTATCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCCATTGTTTGTCATTCAGAAGCTATGTGTATATAGAAAATTCC-AGCAAA----tttt-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54910151 122 + 59248254 atgtatgtattacatgtatgtatatatTTTTGGCAGCTATCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCCATTTTTTGTCATTCAGAAGCTATGTGTATATAGAAAATTCC-AGCAAA---ttttt-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028776 125 + 51301725 atgtatgtattacatgtatgtatatatttttggcagCTATCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCCATTGTTTGTCATTCAGAAGCTATGTGTATATAGAAAATtcc-agcaactttttttt-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46745089 122 + 50890351 atgtatgtattacctgtatgtatatatTTTTGGCAGATGTCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCTATTGTTTGTCATTCAGAAGCTATGTGTATATAGAAAATTCC-AGCAAC---ttttt-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45321399 64 + 49145316 atatttatattatgta-----atatatt------aaatgt------agacata-----------------tttta-------------------------cacatatatatat---atttt----------ttatt-- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19475654 129 - 122678785 acgtaggtgttccATCCATCT---TATTTCTTGAAGGCACTTCTTTGGGTTGATTTTTTTAACCTGTTACTTATG-TCCCATTGTTTCTCATTTTGTATATTCATTTATATACAAAATTCC-AGCAAC---CTTTT-C i canFam3.chr1 I 134 C 0 a score=58119.000000 s hg38.chr19_GL949747v2_alt 33422 34 + 729520 tttcttttttttttttttttttt---gaaatgtagtc s panTro4.chr19 58970237 30 + 63644993 tttcttttttttttttttttttt----aaatgt---c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836894 37 + 60714840 tttctttcttttttttttttttttttgaaatgtagtc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599598 26 - 106955855 --------tcttttttttttttt---gagatgtagtc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59892878 26 + 64156825 --------tttttttttcttttt---gagatgtagtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54910273 26 + 59248254 --------tttttttttcttttt---gagatgtagtc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028901 26 + 51301725 --------tttttttttcttttt---gagatgtagtc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46745211 26 + 50890351 --------tttttctttcttttt---gagatgtagtc i chlSab2.chr6 C 0 T 3728 s calJac3.chr22 45321463 26 + 49145316 --------ttttttttatttttt---gaaacggagtt i calJac3.chr22 C 0 C 0 e canFam3.chr1 19475783 0 - 122678785 C a score=118469.000000 s hg38.chr19_GL949747v2_alt 33456 40 + 729520 ttgctc-tgttgcacaggctggagtgcaatgacatgatctc s panTro4.chr19 58970267 40 + 63644993 ttgctc-tgttgcccaggctggagtgcaatgacatgatctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836931 40 + 60714840 ttgctc-tgttgcccaggctggagtgcaatgacatgatctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599624 40 - 106955855 ttgctc-tgttgcccaggctggagtgcaatgacatgatctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59892904 40 + 64156825 ttactc-tgttgcccaggctggagtgcaatggcacgatctc i rheMac3.chr19 C 0 I 222 s macFas5.chr19 54910299 40 + 59248254 ttactc-tgttgcccaggctggagtgcaatggcacgatctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028927 40 + 51301725 ttactc-tgttgcccaggctggagtgcaatggcacgatctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46741509 40 + 50890351 ttgctc-tgtcgcctaggctggagtgcagtggcatgatctc i chlSab2.chr6 T 3728 C 0 s calJac3.chr22 45321489 41 + 49145316 tcgctcttgttacccaggctggagtgcaatggcgagatctc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19475783 0 - 122678785 C a score=496418.000000 s hg38.chr19_GL949747v2_alt 33496 233 + 729520 agttcactgcaacctccgcctcccaggttcaagcaattttcctgcctcagcctcccgagtagctgggactacag--gcacccgccaccacacctggctaatttttgcatttttagtagagac-agggtctcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacacgcctcggcctcccaaagtgctgggattacaggcgtgagccactgcccccggc-cCA s panTro4.chr19 58970307 233 + 63644993 agttcactgcaacctccgcctcccaggttcaagcaattttcctgcctcagcctcctgagtagctgggattacag--gcacccgccaccacgcctggctaatttttgtatttttagtagagac-agggtctcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacacgcctcggcctcccaaagtgctgggattacaggcgtgagccactgcccccggc-cCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836971 233 + 60714840 agttcactgcaacctccgcctcccaggttcaagcgattttcctgcctcagcctcccgagtagctgggactatag--gcacctgccaccacacctggctaatttttgtatttttagtagagac-agggtctcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccacctcggcctcccaaagtgcgaggattacaggcgtgagccaccgctcccggc-cCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599664 233 - 106955855 agttcactgcaacctccgcctcccaggttcaagcgattttcctgcctcagcctcctgagtagctgggactacag--gcacccgccaccacgcctggctaatttttatatttttagtagagag-agggtctcaccatgttggccaggctggtcttgaactcctgacctcagttgatccacacgcctcagcctcccaaagtgctgggattatagacgtgagccaccgtgcccggc-cCA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54910339 231 + 59248254 agttcactgcaacctccgcctcccaggtttaagtgattctcctgccttagcctccccagtagctgggactacag--gcgcccaccaccatgcctggctaatttttgtatttttagtagagacaagagtctcaccatattggccaggctgatcttgaactcctggcctcaggtgatccgcctgcctcggactcccaaagttctgggattacaggtacgagctaccgcacctggc---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028967 231 + 51301725 agttcactgcaacctccgcctcccaggtttaagtgattctcctgccttagcctcccgagtagctgggactacag--gcgcccgccaccatgcctggctaatttttgtatttttagtagagacaagagtctcaccatattggccaggctgatcttgaactcctggcctcaggtgatccgcctgccttggcctctcgaagttctgggattacaggtacgagctaccgcacctggc---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46741549 232 + 50890351 agctcattgcaatctccacctcctgggttcatgtaattcacctgccttagcctcccgagtagctgggactacag--gcgcccgccaccatgcctggctaatttttgtatttttagtagagacaagagtctcaccatattggccaggctgatcttgagctcctggcctcaggtgatccgcctgcctcggcctcccaaagttctgggattacaggtacgagctaccgcacctggcc--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45321530 233 + 49145316 agctcaccgcaacctccgcctcctgggttcaggcaattctcctgcctccgcctcccaagtagctgagattacaggcgcgcacgccaccatgcccagctaatttttgtatttttagtagagac-ggggtttcaccatgttgaccaggatggtctcgatctcttgacctc--gtgatccacccgcctcagcctcccaaagtgctgggattacaggcttgagccactgcgcccagc-cTa i calJac3.chr22 C 0 I 1387 e canFam3.chr1 19475783 0 - 122678785 C e rheMac3.chr19 59892944 222 + 64156825 I a score=5001.000000 s hg38.chr19_GL949747v2_alt 33729 10 + 729520 GCAACCTTTT s panTro4.chr19 58970540 10 + 63644993 GCAACGTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837204 10 + 60714840 GCAACCTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599897 10 - 106955855 GCAACCTTTT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19475783 0 - 122678785 C e calJac3.chr22 45321763 1387 + 49145316 I e chlSab2.chr6 46741781 0 + 50890351 C e papAnu2.chr19 47029198 0 + 51301725 C e macFas5.chr19 54910570 0 + 59248254 C e rheMac3.chr19 59892944 222 + 64156825 I a score=2100.000000 s hg38.chr19_GL949747v2_alt 33739 1 + 729520 C s panTro4.chr19 58970550 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837214 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599907 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59893166 1 + 64156825 c i rheMac3.chr19 I 222 C 0 s macFas5.chr19 54910570 1 + 59248254 c i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029198 1 + 51301725 c i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19475783 0 - 122678785 C e calJac3.chr22 45321763 1387 + 49145316 I e chlSab2.chr6 46741781 0 + 50890351 C a score=264207.000000 s hg38.chr19_GL949747v2_alt 33740 98 + 729520 TGATGTATTGAATTGCTTTCATGAGTAATC---CTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTGGTATTTTCTGTGATTGCAG---------TG s panTro4.chr19 58970551 98 + 63644993 TGATGTATTGAATTGCTTTCACAAGTAATC---CTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTGGTATTTTCTGTGATTGCAG---------TG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837215 106 + 60714840 TGATGTATTGAATTGCTTTCATGAGTAATCCATCTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTGGTATTTTCTGTGATTGCAG----ttttttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599908 101 - 106955855 TGATGTATTGAATTGCTTTCACGAGTAATCCTTCTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTTGTATTTTCTGTGATTGCAG---------TG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59893167 110 + 64156825 TGATGTATTGAATTGCTTTCACGAGTAATCATTCTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTTGTATTTTCTGTGATTGCAGTAttttgtttg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54910571 110 + 59248254 TGATGTATTGAATTGCTTTCACAAGTAATCATTCTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTTGTATTTTCTGTGATTGCAGTAttttgtttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029199 110 + 51301725 tgatgtATTGAATTGCTTTCACGAGTAATCATTCTTTCACCATCTAGAAATTGTTCAACATTCACCTatgcttttttcttgtattttctgtgattgcagtattttgtttg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46741781 110 + 50890351 TGATGTATTGAATTGCTTTCACGAGTAATCATTCTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTTGTATTTTCTGTGATTGCAGTAttttgtttg i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19475783 97 - 122678785 TGATCTATCATGTTGCTTTCACG----ATCAGTCTTTCACCATCTAAATATCATCACATATTTACTTGTATTTTCCTCTCCTGCTTTCTATGACTGAACTC--------- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45321763 1387 + 49145316 I a score=444076.000000 s hg38.chr19_GL949747v2_alt 33838 195 + 729520 ttttgttttgttttgagacagagtctcgctgtgtcacccaggctggagtgcagtggtgcagtctcagctcactgcaacctcctccaccccctgggttcaagtgatactcgtacctcaggctccagagtagctgggactacaggtgtgtgccatcgtgcccagctaatttttgttgttgttgt------------------------tgtagagatgggg s panTro4.chr19 58970649 192 + 63644993 ttttgttttgttttgagacagagtctcgctgtgtcacccaggctggagtgcagtggtgcaatctcagctcactgcaacctcctccaccccctgggttcaagtggtactcgtacctcaggctccagagtagctgggactacaggtgtgtgccatcgtgcccagctaatttttgttgttgttgt---------------------------agagatgggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837321 219 + 60714840 tttcgttttgttttgagacagagtctcgctgtgtcacccaggctggagtgcagtggtgcaatctcagctcactgcaacctcctccaccccctgggttcaagtgatactcgtacctcagggtccagagtagctgggactaccggtgtgcgccatcacgcccagctaatttttgttgttgttgttgttgttgttgttgttgttgttgttgtagagatgggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102600009 198 - 106955855 ttttgttttgttttgagacagagtctcactgtgtcacccaggctggagtgcagtggtgcaatctcagctcactgcaacctcctccaccctctgggttcaagtgatacccgtacctcaggctccagagtagctgggactacaggtgtgtgccatcatgcccagctaatttttgttgttgttgt---------------------tgttgtagagatgggg i nomLeu3.chr10 C 0 M 1769 s rheMac3.chr19 59893277 195 + 64156825 ctttgtttcgttttgagacagagtctcgctgtgtcacccaggctggagtgtggtggtgcaatctcagctcactgcaacctcctacaccccctgggttcaagtgattcttgtacctcagtctccagagtagctgggactacaggtgtgcaccacgatgcccaactaattgttgttgttgttgt------------------------tgttgagatgggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54910681 192 + 59248254 ctttgtttcgttttgagacagagtctcgctgtgtcacccaggctggagtgtggtggtgcaatctcagctcactgcaacctcctacaccccctgggttcaagtgattctcgtacctcagtctccagagtagctgggactacaggtgtgcaccacgatgcccaactaa---ttgttgttgttgt------------------------tgttgagatgggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029309 195 + 51301725 ctttgtttcgttttgagacagagtctcgctgtgtcacccaggctggagtgcggtggtgcaatctcagctcactgcaacctcctacaccccctgggttcaagtgattctcgtacctcagtctccagagtagctgggactacaggtgtgcaccacgatgcccaactaattgttgttgttgttgt------------------------ttttgagatgggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46741891 186 + 50890351 ctttgtttcgttttgagacagagtctcgctgtgtcacccaggctggagtgcggtggtgcaatctcagctcactgcaacctcctacaccccctgggttcaagtgattctcatacctcagtctccagagtagctgggactacaggtgtgcaccacgatgcccaactaa---------ttgttgt------------------------tgttgagatgggg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19475880 0 - 122678785 C e calJac3.chr22 45321763 1387 + 49145316 I a score=211757.000000 s hg38.chr19_GL949747v2_alt 34033 117 + 729520 tttcaccatgttgcccaggctggtctcaaactcctgagctcaagtgatccacccgcctcagcctcccaaagcgctgggattacaggcatgagccaccgtgcccggccTGATTGCAGT s panTro4.chr19 58970841 117 + 63644993 tttcaccatgttgcccaggctggtctcaaactcctgagctcaagtgatccacccgcctcagcctcccaaagcgctgggattacaggcatgagccactgcacacggccTGATTGCAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837540 117 + 60714840 tttcgccatgttgcccaggctggtctcaaactcctgagctcaagtgatccgcctgcctcggcctcccaaagtgctgggattacaggcatgagaaaccgcgcccagccTGATTGCAGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59893472 117 + 64156825 tttcaccatattgcccaggctggtctcaaactcctgacctcaagtgatccgtctgcctcagcctcccaaagtgctgagattacaggcatgagccaccgtgcccgaccTGATTGCAGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54910873 117 + 59248254 tttcgccatattgcccaggctggtctcaaactcctgaccgcaagtgatccgtctgcctcagcctcccaaagtgctgagattacaggcatgagccaccgtgcccgaccTGATTGCAGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029504 117 + 51301725 tttcgccatattgcccaggctggtctcaaactcctgacctcaagtgatccatctgcctcagcctcccaaagtgctgagattacaggcatgagccaccgtgcccgacctgaTTGCAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742077 117 + 50890351 tttcgccatattgcccaggctggtctcaaactcctgacctcaagtgatccatctgcctcagcctcccaaagtgctgggattacaggcatgagtcaccgtgcccgaccTGATTGCAGT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19475880 0 - 122678785 C e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M a score=75688.000000 s hg38.chr19_GL949747v2_alt 34150 45 + 729520 TTT-ACCCTTGCCACTTAAATAATGCAAAGG----TTATTTTATCGTG----GA s panTro4.chr19 58970958 46 + 63644993 TTTTACCGTTGCCACTTAAATAATGCAAAGG----TTATTTTATCGTG----GA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837657 46 + 60714840 TTTTACCCTTGCCACTTAAATAATGCAAAGG----TTATTTTATCGTG----GT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59893589 46 + 64156825 TTTTACCCTTGCCACTTAAATAATGCAAACG----TTATTTTCCCGTGGA---- i rheMac3.chr19 C 0 I 4 s macFas5.chr19 54910990 44 + 59248254 TTTTACCCTTGCCACTTAAATAATGCAAACG----TTATTTTCCCGTG------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029621 44 + 51301725 TTTTACCCTTGCCACTTAAATAATGCAAACG----TTATTTTCCCATG------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742194 46 + 50890351 TTTTACCCTTGCCACTTAAATAATGCAAACA----TTATTTTCCCGTG--GA-- i chlSab2.chr6 C 0 I 4 s canFam3.chr1 19475880 49 - 122678785 -TTCACCTTTGTCACTTAGATAACGCAATGGTTATTTATTTTACTGTG----GA i canFam3.chr1 C 0 C 0 e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M a score=2166.000000 s hg38.chr19_GL949747v2_alt 34195 3 + 729520 GTG s panTro4.chr19 58971004 3 + 63644993 GTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837703 3 + 60714840 GTG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54911034 1 + 59248254 --G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029665 1 + 51301725 --G i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19475929 3 - 122678785 GTG i canFam3.chr1 C 0 I 1 e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M e chlSab2.chr6 46742240 4 + 50890351 I e rheMac3.chr19 59893635 4 + 64156825 I a score=910.000000 s hg38.chr19_GL949747v2_alt 34198 1 + 729520 A s panTro4.chr19 58971007 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837706 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54911035 1 + 59248254 A i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029666 1 + 51301725 A i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19475932 1 - 122678785 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M e chlSab2.chr6 46742240 4 + 50890351 I e rheMac3.chr19 59893635 4 + 64156825 I a score=33669.000000 s hg38.chr19_GL949747v2_alt 34199 155 + 729520 GAGTGGTGGGttttttttttt-----------------------------------------tttttatttttcgagatggagtctcgctctgtcacccaggctggagtgcagtggcgcgatctcggctcaccgcaagctctgcctcccgggttcacgccattctcctgcctcggcctcccgagtagctgggacta s panTro4.chr19 58971008 156 + 63644993 GAGTGGTGGGttttatttttta----------------------------------------tttttatttttcgagatggagtctcgctctgtcacccaggctagagtgcagtggcacgatctcggctcaccgcaagctctgccttccgggttcacgccattctcctgcctcggcctcccgagtagctgggacta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837707 195 + 60714840 GAGAGGTAGGTtttattttttgtatttatttatttatttatttatttatttatttatttatttatttattttttgagacggggtctcgctctgtcacccaggctggagtgaaatggctcgatctcggctcattgcaagctctgcctcccgggttcacaccattctcctgcatcaacctcacgagtag-tgggacta i ponAbe2.chr19 C 0 I 1515 e canFam3.chr1 19475932 1 - 122678785 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M e chlSab2.chr6 46742240 4 + 50890351 I e papAnu2.chr19 47029667 0 + 51301725 C e macFas5.chr19 54911036 0 + 59248254 C e rheMac3.chr19 59893635 4 + 64156825 I a score=14920.000000 s hg38.chr19_GL949747v2_alt 34354 164 + 729520 caggcacccgccaccaagcccagctaattaatttttttgtatttttagtagagacggggtttcactgtgttagccaggatggtcttgatctcctgacctcgtgatccacccgcctcggactcccaaagtgctgggattacaggcatcagccaccgcgcccggcc s panTro4.chr19 58971164 164 + 63644993 caggcacccgccaccacgcccaggtaattaatttttttgtatttttagtagagacggggtttcaccatgttagccaggatggtcttgatctcctgaccttgtgatccacccgcctcggactcccaaagtgctgggattacaggcatcagccaccgcgcccggcc i panTro4.chr19 C 0 C 0 e canFam3.chr1 19475932 1 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M e chlSab2.chr6 46742240 4 + 50890351 I e papAnu2.chr19 47029667 0 + 51301725 C e macFas5.chr19 54911036 0 + 59248254 C e rheMac3.chr19 59893635 4 + 64156825 I a score=1704.000000 s hg38.chr19_GL949747v2_alt 34518 4 + 729520 GAGA s panTro4.chr19 58971328 4 + 63644993 GAGA i panTro4.chr19 C 0 C 0 s macFas5.chr19 54911036 4 + 59248254 AAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029667 4 + 51301725 AAGG i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19475933 4 - 122678785 GAGC i canFam3.chr1 I 1 C 0 e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M e chlSab2.chr6 46742240 4 + 50890351 I e rheMac3.chr19 59893635 4 + 64156825 I a score=141927.000000 s hg38.chr19_GL949747v2_alt 34522 92 + 729520 GGAGGGTTTTCTTGCTCAATTCCAATAGAGAGAATCTGCTCCCCCTTCCCCGTGTCTTC--------------------------TGGTCCCAAATACTCTCCTCACTTTAGCTTTGG s panTro4.chr19 58971332 92 + 63644993 GGAGGGTTTTCTTGCTCAATTCCAATAGAGAGAATCTGCTCCCCCTTCCCCGTGTCTTC--------------------------TGGTCCCAAATACTCTCCTCACTTTAGCTTTGG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59893639 92 + 64156825 GGAGGGTTTTCTTGCTCAATTCCAATAGAGAGAATCTGCTCCCCCTTCCCCGTGTCTTC--------------------------TGGTTCCAAGTACTCCCCTCACTTTAGCTTTGG i rheMac3.chr19 I 4 C 0 s macFas5.chr19 54911040 92 + 59248254 GGAGGGTTTTCTTGCTCAATTCCAATAGAGAGAATCTGCTCCCCCTTCCCCGTGTCTTC--------------------------TGGTTCCAAGTACTCCCCTCACTTTAGCTTTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029671 92 + 51301725 GGAGGGTTTTCTTGCTCAATTCCAATAGAGAGAATctgctcccccttccccatgtCTTC--------------------------TGGTTCCAAGTACTCCCCTCACTTTAGCTTTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742244 92 + 50890351 GGAGGGTTTTCTTGCTCAATTCCAATAGAGAGAATCTGCTCCCCCTTCCCCGTGTCTTC--------------------------TGGTTCCAAGTACTCCCCTCACTTTAGCTTTGG i chlSab2.chr6 I 4 C 0 s canFam3.chr1 19475937 116 - 122678785 AGAGGGTTTCCTCTCT-GATTCAAATGGGGAGAAACCACTCTCTCTGCCCAGGTTCTTCTTTTCATGAAGAATTTGAGACATTCATGGTCCTAAATGCCCTTTCCA-TGTGGCTTTGA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M a score=690955.000000 s hg38.chr19_GL949747v2_alt 34614 360 + 729520 TTTCCACTTACATTATCCCCTCCCTCTTCTGTGTTCTGTTCTCTACATTCCCCGCTGGGAAGGTAGCGTCTTAAACTTGGGTGGAAA-ATGGGATGTCAGTCATGGGGCTTGTTTCAGGGTGAAGTTACGTAGAATTTAGGTAGAAATTCTCTAGA-GCCACGACAGTGTCTCAGGACATTGGTTCCTTGTT--GACACAGGTGCCGATACAG-AACGTGACCCCCCACCAAGCTTCACCACAGAGGAATGAGGTGGAGGCCTCACGATGGACCGAAGCTGCGTTGGCAGCGAGATTAGCTGGGATTGGCAGGTAGGAAACAGCCTCTGGGTGGGCAGGGCATCCCAGGACTCAGGCTCTGTTTT s panTro4.chr19 58971424 360 + 63644993 TTTCCACTTACATTATCCCCTCCCTCTTCTATATTCTGTTCTCTACATTCCCTGCTGGGAAGGGAGCGTCTTAAACTTGGATGGAAA-ATGGGATGTCAGTCATGGGGCTTGTTTCAGGGTGAAGTTACGTAGAATTTAGGTAGAAATTCTCTAGG-GCCACGACAGTGTCTCAGGACATTGGTTCCTTGTT--GACACAGGTGCCGATACAG-AACGTGACCCCTCACCAAGCTTCACCACAGAGGAATGAGGTGGAGGCCTCACGATGGACCGAAGCTGCGTTGGCACCGAGATTAGCTGGGATTGGCAGGTAGGAAACAGCCTCTGGGTGGGCAGGGCATCCTAGGACTTAGGCTCTCTTTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102602001 360 - 106955855 TTTCCACTTACATTATCCCCTCCCTCTTCTGTGTTCTGTTCTCTACATTCCCCGCCGGGAACGGAGCGTCGTAAACTTGGGTGGAAA-ACGGGATGTCAGTCATGGGGCTTGTTTCA-GGTGAAGTTACCTAGAATTTAGGTAGAAATTCTCTAGA-GCCACGAGAGTGTCTCAGGACATTGGTTTCTTGTT--GACACAGGTGCCGATGCAGAAACGTGACCCCCCACCAAGCTTCACCGCAGAGGAATGAGGTGGAGGCCTCACGATGGACCGAGGCTGTGTTGGCAGCGAGATTCGCTGGGATTGGCAGGTAGGAAACAGCCTCTGCGTGGGCAGGGCATCCCAGGACTCAGGCTCTCTTTT i nomLeu3.chr10 M 1769 C 0 s rheMac3.chr19 59893731 351 + 64156825 TTTCCACTTACATCATCCCCTTTCTCTTCTATGTTCTGTTCTCTATATTCCCTGCGGGGAAGGGAGCGTCATAAACTTGCGTGGAAA-ATGGGACGTCAGTCATGGGGCTTGTTTCAGGGTGAAGTTAGGTAGAATTGAGGTAGAATTTCTCTAGA-GCCA-------GTCTCAGGACATTGGTTCCTTGTT--GACGCAGGTACCGACGCAG-AACGTGACCCCACACCAAGCTTCACCGCAAAGGAATGAGGTGGA-GCCTCACGATGGACCGAGGCTGCGTTGGCAGCGAGATTGACTGGGATTGGCAGGTAGGAAACAGCCTCTGAAT-GGCAGGGCATCCCAGGACTCAGGCTCTCTTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54911132 351 + 59248254 TTTCCACTTACATCATCCCCTTTCTCTTCTATGTTCTGTTCTCTATATTCCCTGCGGGGAAGGGAGCGTCATAAACTTGCGTGGAAA-ATGGGACGTCAGTCATGGGGCTTGTTTCAGGGTGAAGTTAGGTAGAATTTAGGTAGAATTTCTCTAGA-GCCA-------GTCTCAGGACATTGGTTCCTTGTT--GACGCAGGTACCGACGCAG-AACGTGACCCCACACCAAGCTTCACCGCAAAGGAATGAGGTGGA-GCCTCACGATGGACCGAGGCTGCGTTGGCAGCGAGATTGACTGGGATTGGCAGGTAGGAAACAGCCTCTGAAT-GGCAGGGCATCCCAGGACTCAGGCTCTCTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029763 358 + 51301725 TTTCCACTTACATCATCCCCTCCCTCTTCTATGTTCTGTTCTCTATATTCCCTGTGGGGAAGGGAGCGTCATAAACTTGCGTGGAAA-ATGGGACGTCAGTCATGGGGCTTGTTTCAGGGTGAAGTTAGGTAGAATTTAGGTAGAATTTCTCTAGA-GCCACGAGAGTGTCTCAGGACATTGGTTCCTTGTT--GACGCAGGTACCGACGCAG-AACGTGACCCCACACCAAGCTTCACCGCAAAGGAATGAGGTGGA-GCCTCACGATGGACCGAGGCTGCGTTGGCAGCGAAATTGGCTGGGATTGGCAGGTAGGAAACAGCCTCTGGAT-GGCAGGGCATCCCAGGACTCAGGCTCTCTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742336 357 + 50890351 TTTCCACTTACCTCATCCCCTCCTTCTTCTATGTTCTGTTCTCTATATTCCCTGTGGAGAAGGGAGCGTCATAAACTTGCGTGGAAA-ATGGGACGTCAGTCATGGGGCTTGTTTCAGGGTGAAGTTAGGTAGAATTTAGGTAGAATTTCTCTAGA-GCCA--CGAGTGTCTCAGGACGTTGGTTCCTTGTT--GACACAGGTACCGAGGCAG-AACGTGACCCCACACCAAGCTTCACCGCAAAGGAATGAGGTGGAGGCCTCACGATGGACCGAGGCTGCGTTGGCAGCGAGATTGGCTGGGATTGGCAGGTAGGAAACAGCCTCTGGAT-GGCAGGGCATCCCAGGACTCAGGCTCTCTTTT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19476053 342 - 122678785 TCTATATAAATGTTAGACCCTACTTCTCCTGTGTTCTGTTCTATGCATTTCATTCTGGAATAGAAAGGTCAT-TTCATGAATGGAAATATGGGAAACTAGTCTTGGGGTATGTCAAGAGGTGATGT---------------TAGAATTTCTCTAGATGCCA---GAGTGTCTCAGGATATCTGGCCTTTCTTTAAACTCAGGAGTCAACTCAC-AACATGGACCC---TCAAACTTCACCAAGAAGGAAGGAGATGGTGGCCTGATGATGCACTGAGTCTGAGTTTGCAGTAATAATGGTGGGAATTTGTAGTAGGAAAGCATCCTCTGGGTGGTCAGGGGGTCGTAGGTCTCATGGTCCCTTtt i canFam3.chr1 C 0 I 380 e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I a score=8022.000000 s hg38.chr19_GL949747v2_alt 34974 4 + 729520 GAGA s panTro4.chr19 58971784 4 + 63644993 GAGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102602361 4 - 106955855 GAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59894082 4 + 64156825 GAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54911483 4 + 59248254 GAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47030121 4 + 51301725 GAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742693 4 + 50890351 GAGA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19476395 380 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I a score=178310.000000 s hg38.chr19_GL949747v2_alt 34978 82 + 729520 CCCTCCCCA-AATCCCGCTTTTAGATTCATGTCATCTCATCTCTGCTATCCACCCATCGTCTGTTCAAACAGTGATTCCTATA s panTro4.chr19 58971788 82 + 63644993 CCCTCCCCA-AATCCCGCTTTTAGACTCATGTCATCTCATCTCTGCTATCCACCCATCATCTGTTCAAACAGTGATTCCTATA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102602365 82 - 106955855 CCCTCCCCA-AATCCCGCTTTTAGACTTATATCATCTCATCTCTGCTATCCACCCATCGTCTGTTCAAACAGTGATTCCTATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59894086 82 + 64156825 CCCTCCCCA-AATCCCTCTTTTAGACTCATGTCATCTCATCTCTGCTATCCATCCATCGTCTGTTCAAACAGTGATTCCTATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54911487 82 + 59248254 CCCTCCCCA-AATCCCGCTTTTAGActcatgtcatctcatctctgctatccatccatcGTCTGTTCAAACAGTGATTCCTATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47030125 82 + 51301725 CCCTCCCCA-AATCCCGCTTTGAGACTCATGTCATCTCATCTCTgctatccatccatcatctgtTCAAACAGTGATtcctata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742697 82 + 50890351 CCCTCCCCA-AATCCCGCTTTTAGActcatgtcatctcatctctgctatccatccatcGTCTGTTCAAACAGTGATTCCTATA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19476775 79 - 122678785 CTTTCCTCACAAACCTGCTTTTAGACTCATGTTGCCTCAGCTCTGGTATTAGCCAATATTCTGC----ACAGTGATTCCCTTA i canFam3.chr1 I 380 I 3401 e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I a score=274299.000000 s hg38.chr19_GL949747v2_alt 35060 153 + 729520 ttcttttttctttttgagacagggtctcactctgtggcccaggctggagtgccagggtgcagtcacagctcactgcagcctcaacctcctgggctcaagtgatccatccatctcagcctcccaaataactgggactacaggcatgcaccacca s panTro4.chr19 58971870 152 + 63644993 ttcttttt-ctttttgagacagtgtctcactctgtggcccaggctggagtgccagggtgcagtcatagctcactgcagcctcaacctcctgggctcaagtgatccgcccatctcagcctcccaaataactgggactacagacatgcaccacca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102602447 152 - 106955855 ttcttttt-ctttttgagtcagggtctcactctgtggcccaggctggagtgccgggctgcggtcacagctcactgcagcctcaacctcctcggctcaagtgatctgcccgtgtcagcctcccaaataactgggactacaggcacgcaccacca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59894168 152 + 64156825 ttcttttt-ctttttgagataggatctcactctgtggcccaggctggagtgctggagtgcagtcacagctcgctgcagcctcgacctcctgggctcaagtgatctgcctgtctcagcctcccaaataactgggactacaggcatgtgccacca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54911569 152 + 59248254 ttcttttt-ctttttgagataggatctcactctgtggcccaggctggagtgctggagtgcagtcacagctcgctgcagcctcgacctcctgggctcaagtgatctgcctgtctcagcctcccaaataactgggactacaggcatgtgccacca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47030207 152 + 51301725 ttcttttt-ctttttgagataggatctcactctgtggcccaggctggagtgctggagtgcagtcacagctcgctgcagcctcgacctcctgggctcaagtgatctgcctgtctcagcctcccaaataactgggactacaggcatgtgccacca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742779 152 + 50890351 ttcttttt-ctttttaagataggatctcactctgtggcccaggctggagtgctggagtgcagtcacagctcgctgcagcctcgacctcctgggctcaagtgatctgcctgtctcagcctcccaaataactgggactacaggcatgtgccacca i chlSab2.chr6 C 0 I 21 e canFam3.chr1 19476854 3401 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I a score=17655.000000 s hg38.chr19_GL949747v2_alt 35213 17 + 729520 cgct-ggctgattttaaa s panTro4.chr19 58972022 18 + 63644993 cgcccggctgatttttaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102602599 18 - 106955855 cgcccggctgatttttaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59894320 18 + 64156825 ggcccggctaatttttaa i rheMac3.chr19 C 0 I 7 s macFas5.chr19 54911721 18 + 59248254 ggcccggctaatttttaa i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47030359 18 + 51301725 ggcctggctaatttttaa i papAnu2.chr19 C 0 I 14 e canFam3.chr1 19476854 3401 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I e chlSab2.chr6 46742931 21 + 50890351 I a score=720109.000000 s hg38.chr19_GL949747v2_alt 35230 468 + 729520 atttttttgtagagatgaggactcacgatg------------------ttgcccaggctggtctcgaacacctgagttcaagtgattctcccaccttggcctcccaacatgctgggattacaggtgtgagctacctgcacccagccCAATTCCCATATTCtttttcttttctttttttttttt-tttttttgacatggagtctccctctgtcacccaggctggagggcagcggtgctatcttagctcactgcaacctctgcctcccaggttcaa-gcgattttcctgcctcagcctcccgagtagctgggattacaggtccttgccaccatgcccagctaa-tttttgtatttttagtagagacggggtttcaccatgttggccagtctggtctcaaactcctgacctcaagagatctgcccgcctgggcctcccaaagtcctgagattacaggcgtgagccaccacacctggctgatttgtgtttctt s panTro4.chr19 58972040 455 + 63644993 atttttttgtagagatgaggactcagtatg------------------ttgcccaggctggtctcgaacacctgagttcaagcgattctcccaccttggcctcccaacatgctgggattacagatgtgagctacctgcacccagccCAATTCCCACAttctttttctttt--------------tttttttgacatggagtctccctctgtcacccaggctggagggcagtggtgctatcttagctcactgcaacctctgcctcccaggttcaa-gcgattttcctgcctcagcctcccgagtagctgggattacaggtccttgccaccatgcccagctaa-tttttgtatttttattagagacggggtttcaccatgttggccagtctggtctcaaactcttgacctcaagagatctgcccacctgggcctcccaaagtcctgagattacaggcgtgagccaccacacctggctgatttgtgtttctt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102602617 460 - 106955855 atttttttgtagaggtgaggactcactatg------------------ttgcccaggctggtctcgaacacctgagttcaagcgattcttccaccttggcctcccagcgtgctgggattacaggtgtgagctacctgcacccagccCAATCCCCATAttctttttctttc--------ttttc-tttttttgatacggagtctccctctgttactcaggctggagtgcagtggtgctatctcagctcactgcaacctctgcctcccaggttcaa-gcgattttcctgcctcagcctcccgagtagctgggattacaggtgctcgcaatcatgcccagctaa-tttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaagagatctgcccacctgggcctctcgaagtcctgagattacaggcatgagccaccacacccggctgatttgtgtttctt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59894345 446 + 64156825 ttttttaagtagagatgggatttcaccatgnnnnnnnnnnnnnnnnnn------------------------tgagctcaagcgattctcccacctcggcctcccaacatgctgggattacaggcatgagctacctgcaaccagccCAATTCCCATAttctttttc------------------tttttttgacatggaatctccctctgtcacccatgctggagtgctgtggtgttctctcagctcactgtaacctctgcctctcaggttcca-gcgattttcctgcctcagcctcccgagtagctgggattacaggcacctgccaccatgcccagctgattttttgtatttttagtagagatggggtttcgccatgttggccaggctgatctcaaactcctgacctcgagagatctgcccacctgggcctcccaaagtcctgagattacaagtgtgagccaccacacccagctgatttgcgtttctt i rheMac3.chr19 I 7 C 0 s macFas5.chr19 54911750 452 + 59248254 ttttttttgtagagatgaggactcactgtg------------------ttgcccaggctggtctggaacacctgagctcaagcgattctcccacctcggcctcccaacatgctgggattacaggcatgagctacctgcaaccagccCAATTCCCATAttctttttc------------------tttttttgacatggaatctccctctgtcacccatgctggagtgctgtggtgttctctcagctcactgtaacctctgcctctcaggttcca-gcgattttcctgcctcagcctcccgagtagctgggattacaggcacctgccaccatgcccagctgattttttgtatttttagtagagatggggtttcgccatgttggccaggctgatctcaaactcctgacctcgagagatctgcccacctgggcctcccaaagtcctgagattacaagtgtgagccaccacacccagcTGATTTGCGTTTCTT i macFas5.chr19 I 11 C 0 s papAnu2.chr19 47030391 467 + 51301725 ttttttttgtagagatgaggactcactgtg------------------ttgctcaggctggtctggaacacctgagctcaagcgattctcccacctcggcctcccaacatgctgggattacaggcatgagctacctgcAACCAGCCCAATTcccatattctttttctttttttttttttttttttttttttgagacggagtctcgctctgtca-ccaggctggagtgcaatggccggatcttcgctcactgcaagctccgcctcccgggttttacgccattct-ctgcctcagcctcccgagtagctgggactacaggcgcccgccacctcgcccggctagttttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctc--gtgatccgcccgtctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggcccctttttctttttt i papAnu2.chr19 I 14 I 824 s chlSab2.chr6 46742952 451 + 50890351 ttttttttgtagagatgaggactcaccgtg------------------ttgcccaggctggtctggaacacctgagctcaagcgattctcccacctcggccttccaacatgctgggattacaggcatgagctacctgcaaccagccCAATTCCCATAttctttttc------------------tttttttgacatggaatctccctctgtcacccatgctggagtgctgtggtgttctctcagctcactgtaacctctgcctctcaggttcca-gcgattttcctgcctcagcctcccgagtagctgggattacaggcacctgccaccatgcccagctgattttttgtatttttagtagagatggggtttcgccacg-tggccaggctgatctcaaactcctgacctcgagagatcttcccacctgggcctcccaaagtcctgagattacaggtgtgagccaccacacccagcTGATTTGCGTTTCTT i chlSab2.chr6 I 21 C 0 e canFam3.chr1 19476854 3401 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I a score=104483.000000 s hg38.chr19_GL949747v2_alt 35698 83 + 729520 gaaaagagaagttcaagttgtaactcccaggacctgcgaatgtgaccttatttgaaaatagcattgtctgatctttgcagatg s panTro4.chr19 58972495 83 + 63644993 gaaaagagaagttcaagttgtgactcccaggacctgcgaatgtgaccttatttgaaaatagcattatctgatctttgcagatg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102603077 82 - 106955855 gaaaagagaagttcaagttgtaactcccaggacctgcgaatgtgacctcatttgaaaataa-attatctgatctttgcagatg i nomLeu3.chr10 C 0 M 2026 s rheMac3.chr19 59894791 83 + 64156825 gaaaagagaagctcaagttgtaactcccaggacctctgaatgtgaccttatttggaaataccattatctgatctttgcagatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54912202 83 + 59248254 GAAAAGAGAAGCTCaagttgtaactcccaggacctctgaatgtgaccttatttggaaataccattatctgatctttgcagatg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46743403 83 + 50890351 GAAAAGAGAAGCTCACGTTGtaactcccaggacctctgaatgtgaccttatttggaaataccattatctgatctttgcagatg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19476854 3401 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I e papAnu2.chr19 47030858 824 + 51301725 I a score=135032.000000 s hg38.chr19_GL949747v2_alt 35781 170 + 729520 taattaattaaactaagatgaggtcatactagagtaggctgggtatctaatccaatataacttacaagaagagaaaaagagagacagagacacacagaaggaagacggccatgcgaagacagaggcagagaggccaggctgcaatcatagtgctttgggatgccaagata s panTro4.chr19 58972578 164 + 63644993 taattaattaaactaagatgcggtcataccggagtaggctgggtatctaatccaatataacttacaagaagagaaaaagagagaca------cgcagaaggaagacggccatgcgaagacagaggcagagaGGCCAGGctgcaatcgtagtgctttgggatgccaagata i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59894874 168 + 64156825 taattagttaagctaagatgaggtcatactggagtaggcggggcatctagtccaatataacttacgagaagagaaagagagagaga--gacacgcagaaagaaggtggccatgcaaagacagaggcagagaGGCCAAGctgcaatcacagtgctttgggaggccgagata i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54912285 166 + 59248254 taattagttaagctaagatgaggtcatactggagtaggcggggcatctagtccaatataacttacgagaagagaaagagagagaga--gaca--cagaaagaaggtggccatgcaaagacagaggcagagaGGCCAAGctgcaatcacagtgctttgggaggccgagata i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46743486 168 + 50890351 taattagttaagctaagatgaggtcatactggagtaggcggggcatctagtccaatataacttatgagaagagaaaaagagagaga--gacacacagaaagaaggtggccatgcaaagacagaggcagagaGGCCAGGctgcaatcacagtgctttgggaggccgagata i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19476854 3401 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102603159 2026 - 106955855 M e papAnu2.chr19 47030858 824 + 51301725 I a score=29359.000000 s hg38.chr19_GL949747v2_alt 35951 16 + 729520 ggagaattgcttgagc s panTro4.chr19 58972742 16 + 63644993 ggagaattgcttgagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55839417 16 + 60714840 ggaggattgcttgagc i ponAbe2.chr19 I 1515 C 0 s rheMac3.chr19 59895042 16 + 64156825 ggagaattgcttgagc i rheMac3.chr19 C 0 I 282 s macFas5.chr19 54912451 16 + 59248254 ggagaattgcttgagc i macFas5.chr19 C 0 I 281 s papAnu2.chr19 47031682 16 + 51301725 ggaggattgctcgagt i papAnu2.chr19 I 824 C 0 s chlSab2.chr6 46743654 16 + 50890351 ggagaattgcttgagc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19476854 3401 - 122678785 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102603159 2026 - 106955855 M a score=231838.000000 s hg38.chr19_GL949747v2_alt 35967 140 + 729520 ccaggagttggagactagcctgggcaatatagcaagatcccatctct-----------aaaacagaaattattttaattagtccaacatggtg--gtgtgcacctgtagtcctagctgctcagaaggct-gcggggagg--------------actgcttgagctcag s panTro4.chr19 58972758 154 + 63644993 ccaggagttggagactagcctgggcaatatagcaagaccccatctct-----------aaaagagaaattattttaattagtccaacatggtg--gcgtgcacctgtagccctagctgctcagaaggct-gcggggggggggcgggggggggtactgcttgagctcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55839433 142 + 60714840 ccaggagttggagactagcctaggcaatatagcaagaccccatctct-----------aaaacagaaattattttaattagaccaacatggtggtgtgtgcacctgtagttctagctgctcagaaggct-gcggggagg--------------attgtttgagctcag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59895340 140 + 64156825 ccaggaattggagactagcctgggcaatctagcaagaccccatctct-----------aaaacagaaattactttaattagtccaacatggtg--gtgtgcacctgtagttctagcagctcagaaggct-gtggggagg--------------attgcttgagctcag i rheMac3.chr19 I 282 C 0 s macFas5.chr19 54912748 140 + 59248254 ccaggaattggagactagcctgggcaatctagcaagaccccatctct-----------aaaacagaaattactttaattagtccaacatggtg--gtgtgcacctgtagttctagcagctcagaaggct-gtggggagg--------------attgcttgagctcag i macFas5.chr19 I 281 C 0 s papAnu2.chr19 47031698 140 + 51301725 ccaggaattggagactagcctgggcaatctagcaagactccatctct-----------aaaacagaAATTACTTTAATTAGTCcaacatggtg--gtgtgcacctgtagttctagcggCTCAGAAGGCt-gcggggagg--------------attgcttgagctcag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46743670 152 + 50890351 tcacgacttggagactagccttggcaatatagaaagaccccatcgctgcaaaaaaaaaaaaaaaaaaattattttaattagcccaatgtggtg--gtgtgcacctgtagttgtagctgctcagaaggctaatggggagg--------------attgcttgagcccag i chlSab2.chr6 C 0 I 2373 e canFam3.chr1 19476854 3401 - 122678785 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102603159 2026 - 106955855 M a score=503600.000000 s hg38.chr19_GL949747v2_alt 36107 421 + 729520 gaggttgaggctgcagtgagctatggtggtaccactgcactccggcctgggcaactgagtgagaccctgtctaaagaa-------aa-gaaaaaaaaaaacagagccaacgattggagtgatgcatctacaagttaaagaatgccgggagcgc--------tggctcacgcctgtaatctcaacagtttgggaggctgag----gcgggcagatcacctgaggtcaggagttcgaggccagcctggccaacgtggtgaaaccctgtctctactaaaaatacaaaaattagccaggcatggtggtccatgcttgtaatcccagctacttgggaggctaaggcaggagaattgattgaacccaggaggtggaggttgcagtgaga-aagatcatgccactgcactctagcctgggtgacagagcaagactccgcctc----aagaaaa s panTro4.chr19 58972912 420 + 63644993 gaggttgaggctgcagtgagctatggtagtaccactgcactccggcccgggcaactgagtgagaccctgtctaaagaa-------aa---aaagaaaaaaCAGagccaacgattggagtgatgcatctacaagttaaagaatgccgggagcgc--------tggctcacgcctgtaatctcaacagtttgggaggctgag----gcgggcagatcacctgaggtcaggagttcgagaccagcctggccaacgtggtgaaatcctgtctctactaaaaatacaaaaattagccaggcatggtggcccatgcttgtaatcccagctacttgggaggctaaggcaggagaattgcttgaacccaggaggtggaggttgcagtgagccaagatcatgccactgcactctagcctgggtgacagagcaagactccgcctc----aagaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55839575 423 + 60714840 gaggttgaggctgcagtgagctatggtggtaccactgcactccggcctgggcaactgagtgagaccctgtctaaagaa-------aaaaaaaaaaaaaaaCACagccaacgattggagtgatgcatctacaagttaaagaatgccaggagcgc--------tggctcacgcctgtaatcccagcactttgggaggctgag----gcgggcagatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggcccatgcttgtaatcccagctacttgggaggctaagacaggagaattgcttgaacccaggaggtggaggttgcagtgaaccaagatcatgccactgcactctagcctgggtgacagagcaagactctgcctc----aaaaaaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59895480 436 + 64156825 gaggttgaggctgtagtgagctatggtggtaccactgcactccagcctg-gtgactgagtgagaccctgtctaaaaag----aaaaaaaaaaaaaaaaaaGACagccagcaatttgagtgatgcatctacaagttaaagaatgccaagagggcaggcacggtggctcaagcctgtaatctcaacactttgggaggctggggggagggggtggatcacctgaggtcaggagtttgagaccagcctggccaaaagggtgaaaccccgtctctactaaaaatacagaaattagccaggcgtggtggcccatgcctgtaatccaggctactcgggaggctaaggcaggagtattgcttgaacctgggaggtggcggttgcagtgagccgagatcatgccactgcactctagcctgggtgacagacagagactctgcctc-----aaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54912888 441 + 59248254 gaggttgaggctgtagtgagctatggtggtaccactgcactccagcctg-gtgactgagtgagaccctgtctaaaaagaaaaaaaaaaaaaaaaaaaaaagacagccagcaatttgagtgatgcatctacaagttaaagaatgccaagagggcaggcacggtggctcaagcctgtaatctcaacactttgggaggctggggggagggggtggatcacctgaggttgggagttcgagaccagcctggccaacagggtgaaaccccgtctctactaaaaatacaaaaattagccaggcgtggtggcccatgcctgtaatccaggctactcgggaggctaaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccgagatcatgccactgcactctagcctgggtgacagacagagactctgcctc----aaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47031838 435 + 51301725 gaggttgaggctgcagtgagctatggtggtaccactgcactccagcctgcgtgactgagtgagaccctgtcttaaaaa-----------aaaaaaaaagacagagccAGCAATTTGAGTGATGGATCTACAAGTTAAAGAATGCCAagagggcaggcatggtggctcaagcctgtaatctcaacactttaggaggctgcggggagggggtggatcacctgaggtcaggagttcgagaccagcctggccaacacggtgaaaccccgtctctactaaaaatacaaaaattagctaggcgaggtggcccatgcctgtaatccaggctactcgggaggctaaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccaagatcatgccactgcactctagcctgggtgacagacagagactctgcctcaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19476854 3401 - 122678785 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102603159 2026 - 106955855 M e chlSab2.chr6 46743822 2373 + 50890351 I a score=387013.000000 s hg38.chr19_GL949747v2_alt 36528 273 + 729520 aaaaaaa--------atgccaagaattgtcagccatcactaga----agaggggcataaaacagacgctc--------cttcatagttctcagaaggaatcaacattgcaaacaccttggtttcagacttctcatctccccaacttaaagca-----attctaattcctttaagccaccaggcttgtagtactttggtatggcagccATTGG-------------GGGATGAGGTCAGTCTCCTGGTTGCCCAGCTTACTGTGCTCAGCAGCTGGAGGCTTGGGTAT----------GAACCCGATAGTCATCTCTAAGGC s panTro4.chr19 58973332 272 + 63644993 aaaaaaa---------tgccaagaattgtcagccatcactaga----agaggggcataaaacagacgctc--------cttcatagtcctcagaaggaatcaacattgcaaaccccttggtttcagacttctcatctccccaacttaaagca-----attctaattgctttaagccaccaggcttgtagtactttggtatggcagccATTGG-------------GGGATGAGGTCAGTCTCCTGGTTGCCCAGCTTACTGTGCTCAGCAGCTGGAGGCTTGGGTAT----------GAGCCCGATAGTCATCTCTAAGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55839998 280 + 60714840 aaaaaaaaaaaaaaaatgccaagaattgtcagccatcactaga----agaggggcataaaacagattct---------cttcatagccctcagaaggaatcaacattgccaacatcttggtttcagacttttcatctccccaacttaaagca-----attttaattgctttaagccactaggcttgtagtactttggtatggcagccATTGG-------------GGGATGAGGTCAGTCTCCTGGTTGCCCAGCTTACAGTGCTCAGCAGCTGGAGGCTTGGGTAT----------GAGCCTGATGGTCATCTCTAAGGC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59895916 284 + 64156825 aaaaaaa-aaacagaatgctaagaattgtcagccaccactaga----agaggggcataaaacagattctc--------cctcatagccctcagaaggaatcaacattgccaacactttggtttcagacttctcatctccccaactgcgagagagtgca-tttagttgctttaagccatcaggcttgtagtactttggtatggcagccACTGG-------------GGGATGAGGTCAGCCTCCTGGTTGCCCAGCTTACTGTGCTCAGCAGCTGGAGGTTTGGGTGT----------GAGCCCGATGGTCATCTCTAAGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54913329 285 + 59248254 aaaaaaa-aaacagaatgctaagaattgtcagccaccactaga----agaggggcataaaacagattctc--------cctcatagccctcagaaggaatcaacattgccaacactttggtttcagacttctcatctccccaactgcgagagagtgcattttagttgctttaagccatcaggcttgtagtactttggtatggcagccACTGG-------------GGGATGAGGTCAGCCTCCTGGTTGCCCAGCTTACTGTGCTCAGCAGCTGGAGGTTTGGGTAT----------GAGCCCGATGGTCATCTCTAAGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47032273 285 + 51301725 aaaaaaa-aaaaagaatgccaagaATTGTCAGCCACCACTAGA----AGAGGGGCAtaaaacagattctc--------cctcataGCCCTCAGAAGGAATCAACATTGCCAACACTTTAGTTTCAGACTTCTCATCTCCCCAACTGCGAGAGAGTGCATTTTAGTTGCTTTAAGCCATCAGGCTTGTAGTACTTTGGTATGGCAGCCACTGG-------------GGGATTAGGTCAGCTTCCTGGTTGCCCAGCTTACTGTGCTCAGCAGCTGGAGGTTTGGGTAT----------GAGCCTGATGGTCATCTCTAAGGC i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19480255 313 - 122678785 --------aaacaaggaacccagccctgccagctgtccccagaagcgaggggagcttggaatgaattctcccttggagcctcagagcattcaagaggaatttactcagctagcaccttgatcttggatctctggcctccagaactgtgggagagtagatttatgttgtgttaagccacttggtttgtggcactttgtcacagcagccctggaaatgaatacGGGCAGAGTGAGGTCAGTCTCTCGACTGCCCAGCTTATTCTGCTCTGTAGCTGGAGAGCTGGAGGTTTGGTGCATAGTGACTGACAGCCACCCCTAAAGC i canFam3.chr1 I 3401 C 0 e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102603159 2026 - 106955855 M e chlSab2.chr6 46743822 2373 + 50890351 I a score=36527.000000 s hg38.chr19_GL949747v2_alt 36801 28 + 729520 ACAAATAgccgggtgcagtggctcacac s panTro4.chr19 58973604 28 + 63644993 ACAAATAgccgggtgcagtggatcacac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55840278 28 + 60714840 ACAAATagctgggtgcagtggctcacgc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59896200 28 + 64156825 ACAAATAgccgggtgtagtggctcacgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54913614 28 + 59248254 ACAAATAgccgggtgtagtggctcacgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47032558 28 + 51301725 ACAaatagccgggtgtagtggctcacgc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19480568 0 - 122678785 C e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102603159 2026 - 106955855 M e chlSab2.chr6 46743822 2373 + 50890351 I a score=252151.000000 s hg38.chr19_GL949747v2_alt 36829 166 + 729520 ctgtaatcccagcactttaggaggttgaagtgggtagatcacctgagttcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaacacaa--aaaattagccaggcgtggtggcgtgtgcctataatcccagcttctcgggaggcggagg s panTro4.chr19 58973632 166 + 63644993 ctgtaatcccagcactttaggaggttgaagtgggtagatcacctgagttcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaa--aaaattagccaggcgtggtggcgtgtgcctgtaatcccagcttctcgggaggcggagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55840306 166 + 60714840 ctgtaatcccagcactttaggaggttgaagtgggtagatcacccgagttcaggagtttgagaccagcctggccaacatggtgaaaccccatctttactaaaaatacaa--aaaattagccaggcgtggtggtgcgtgcctgtaatcccagcttctcaggaggctgagg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59896228 166 + 64156825 ctgtaatctcaacactttaggaggttgaagtgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaa--aaaattagccaggcatggtggtgcgcacctgtaatcccagcttctcgggaggctgagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54913642 166 + 59248254 ctgtaatcccaacactttaggaggttgaagtgggtggatcacctgaggtcaggagatcgagaccatcctggctaacatggtgaaaccccgtctctactaaaaatacaa--aaaattagccaggcgtggtggtgcgcacctgtaatcccagcttctcgggaggctgagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47032586 166 + 51301725 ctgtaatcccaacactttaggaggttgaagtgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaa--aaaattagccaggcatggtggtgcgcacctgtaatcccagcttcttgggaggctgagg i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45323150 166 + 49145316 CTGCGATCACTGGGTtttgggaggctgagacagaagaactgtttgagcccatgagtcagagactagcctgggcaatacagcaagaccccatctctaaaaaagaaattattttaattagcccagcatggtggtgtgcac--gtagttctagctgcccagaaggtttggg i calJac3.chr22 I 1387 C 0 e canFam3.chr1 19480568 0 - 122678785 C e nomLeu3.chr10 102603159 2026 - 106955855 M e chlSab2.chr6 46743822 2373 + 50890351 I a score=213147.000000 s hg38.chr19_GL949747v2_alt 36995 95 + 729520 caggagaatcgcttgaacccaggaggtggaggttgcagtgagctgagatcacaccactgcactccagcctgggagacaaagcaagactctgtc------------aa s panTro4.chr19 58973798 95 + 63644993 caggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagatcacaccactgcactccagcctgggagacaaagcaagactctgtc------------aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55840472 95 + 60714840 caggagaatcgcttcaacccaggaggtggaggttgcagtgagctgagatcacaccactgcactccagcctgggagacaaagcaagactctgtc------------aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102605185 95 - 106955855 caggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagatcacaccactgcactccagcctgggagacaaagcaagactctgtc------------aa i nomLeu3.chr10 M 2026 C 0 s rheMac3.chr19 59896394 107 + 64156825 tgggagaatcgcttgaacccaggaggtggcggttgcagtgagccgagatcacaccattgcactccagcctgggagacaaagcaagactctgtctcaaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54913808 107 + 59248254 tgggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagatcacaccattgcactccagcctgggagacaaagcaagactctgtctcaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47032752 107 + 51301725 tgggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagatcacaccattgcactccagcctgggagacaaagcaagactctgtctcaaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45323316 93 + 49145316 --ggaggattgcttgagcccaggaggttgaggctgcagtgagctatggtggtaccactgcactccagcctgggtgacagagtgagacccggtctc------------ i calJac3.chr22 C 0 C 0 e canFam3.chr1 19480568 0 - 122678785 C e chlSab2.chr6 46743822 2373 + 50890351 I a score=54563.000000 s hg38.chr19_GL949747v2_alt 37090 27 + 729520 aaa-------aaaaaaaaa-------------aTGCTCATCTAAGGT s panTro4.chr19 58973893 26 + 63644993 aaa-------aaaaaaaaa--------------TGCTCATCTAAGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55840567 40 + 60714840 aaa-------aaaaaaaaaaaaaaaaaaaaaaaaGCTCATCTAAGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102605280 40 - 106955855 aaa-------aaaaaaaaaaaaaaaaaaaaaaaaGCTCATCTAAGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59896501 27 + 64156825 aag-------caaaaaaaa-------------aaGCTCATCTAAGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54913915 34 + 59248254 aaaaaaaagcaaaaaaaaa-------------aAGCTCATCTAAGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47032859 30 + 51301725 aagcaa----aaaaaaaaa-------------aagctcatctaAGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46746195 27 + 50890351 AAA-------AAAAAAAAA-------------CGGCTCATCTAAGGT i chlSab2.chr6 I 2373 C 0 s calJac3.chr22 45323409 26 + 49145316 aaa-------aaaaaaaaa-------------aaGCTAATCTAA-GT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19480568 0 - 122678785 C a score=803292.000000 s hg38.chr19_GL949747v2_alt 37117 264 + 729520 GCAAATGTGTGTAGGAGACGAGCATTACCCCACAAGGAAGGGCTGCACCCAGAAAAGGAGGAAGGAACTGAAGCAGACGAAGCACGTCGATGTC----------CACCGCACCCC-CCGTGCACCAGGgaggaactggggccttagggaggtggagctctgctgggtca-agcctagagtttctatgtagtaaagccgagattataa-cccaggtcatccgtttcacagtgtgagctctgtctgAATACATCAGGTTCAATTGGAGGATGGTTAAAA s panTro4.chr19 58973919 264 + 63644993 GCAAATGTGTATAGGAGACGAGCATTACCCCACAAGGAAGGGCTGCACCCAGAAAAGGAGGAAGGAACTGAAGCAGATGAAGCACGTCGATGTC----------CACCGCACCCC-CCGTGCACCAGGgaggaactggggccttagggaggtggagctctgctgggtca-agcctagagtttctatgtagtgaagccgagattataa-cccaggtcatccgtttcacagtgtgagctctgtctgaatacatcaggttCAATTGGAGGATGGTTAAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55840607 245 + 60714840 GCAAATGTGTGTAGGAGATGAGCATTACCCCACAAGGAAGGGCTGCACCCAGAAAAGGAGGAAGGAACTGAGGCAGATGAAGCATGTCAATGTC----------CACCACCCGCC-CCGTGCAcc-------------------agggaggtggagctctgctgggtca-agcctagagctcctatgtagtgaagctgagattataa-cccaggtcttccttttcacagtgtgagctctgtctgaatacatcaggttCAATTGGAGGATGGTTAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102605320 263 - 106955855 GCAAATGTG-GTAGGAGACGAGCATTACCCCAAAAGGAAGGGCTGCACCCAGAAAAGGAGGAAGGAACTGAGGCAGATGAAGCTTGTCGATGTC----------CACCACACCCC-CTGTGCACCAGGgaggaactgaggccttaggcaggtggagctctgctgggtca-agcctagagcttctatgtagtgaagctgagattataa-cccaggtcttccttttcacagtgtgagctctgtctgaatacatcaggttCAATTGGAGGATCGTTAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59896528 263 + 64156825 GCAAATGTGTGTGCGAGAGGAGCATTACCCCACAGGGAAGGGCTGCACCCAGAAAAGGGGGAAGGAACTGAGGCAAATGAAGCACATTGATGAC----------CACCACACCcc-ccatgcacca-ggaggaactggggccttagggaggtggagctctgctgggtca-agcctagagctcctaggtagtgaagcccacactgtaa-cccaggtcttccttttcacagtctgagctctgtctgaatacatcaGGTTCAATTTGAGGATGGTTGAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54913949 263 + 59248254 GCAAATGTGTGTGCGAGAGGAGCATTACCCCACAGGGAAGGGCTGCACCCAGAAAAGGGGGAAGGAACTGAGGCAAATGAAGCACATTGATGAC----------CACCACACCcc-ccatgcacca-ggaggaactggggccttagggaggtggagctctgctgggtca-agcctagagctcctaggtagtgaagcccacactgtaa-cccaggtcttccttttcacagtctgagctctgtctgaatacatcaGGTTCAATTTGAGGATGGTTGAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47032889 264 + 51301725 GCAAATGTGTGTGCGAGAGGAGCATTACCCCACAGGGAAGGGCTGCACCCAGAAAAGGGGGAAGGAACTGAGGCAAATGAAGCGCATTGATGAC----------CACCACACCCC-CCATGCACCAGGGAGGAACTGGGGCCTTAGGGAGGTGGAGCTCTGCTGGGTCA-AGCCTAGAGTTCCTAGGTAGTGAAGCCCACATTGTAA-CCCAGGTCTTCCTTTTCACAGTGTGAGCTCTGTCTGAATACATCAGGTTCAATTTGAGGATGGTTAAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46746222 263 + 50890351 GCAAATGGGTGTGCAAGAGGGGCATTACCCCACAGGGAAGGGCTGCACCCAGAAAAGGGGGAAGGAACTGAGGCAAATGAAGCGCATTGATGTC----------CACCACACCcc-ccatgcaccagggaggaactggggccttagggaggtgcagctctgctgggtca-ggcctagagctcctaggtagtgaagcccacactgtaa-cccaggtcttccttttcacagtctgagctctgtctgaatacatcaGGTTCAATTTGAGGATGG-TAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45323435 250 + 49145316 GCAAATGTGTGTAGGAGAGTAGCATTACCCTGCAGGGAAGGGCTGCACCCAGAAAAGG-GGAAGGAACTGAGGCAG-TGAAGCATGTTGATGTC----------TACCACACCCCTCCATGCATCC-------------GCcttagggaggtggaactctgctgggtca-agcctagagctcctatgtagtgaagccaagactataa-cccagatcttccttctgacagtctgagctctgtctgattacatcaGGTTCAATCTGAGGATGGTTTAAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19480568 269 - 122678785 TCAAATGTGTGTGTGGGAGGAGCATTACCCCA-AAAGAAGGGCTGTA-TTGCAGAAGGAGGAAGGAACTACGGCAAATGACAAGTCCTGATAGCCTTTACACAACCCCTCACCCC-CAACTCACGAAAGAAGAACCAGAGTCTT-GGTCAGTGGAG--CTGCTGGTTCGTAGTCTAGGGCTCCTATGAGATCAAGCCAAGGTCATAATCCCAGGTCTTCATTT--ACAGGCTGAGGTCCCTTTGATTGCATCATGTTCAAGTTAAGAACAGTTAAAA i canFam3.chr1 C 0 I 176 a score=701660.000000 s hg38.chr19_GL949747v2_alt 37381 240 + 729520 TCAGCCTAAGAATCGAGCTGGTCAGAAAATTGTCTTCTTGGggccaggtgtggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctgaggtcaggggctcgagaccagcctgaccaacatggtgaaaccccgtctctacttaaaatacaaaagtca-gccgggtgtggtggcctgcacctgtagtcccacctactcgggaggctgaggcaggagaatcgc s panTro4.chr19 58974183 240 + 63644993 TCAGCCTAAGAATCGAGCTGGTCAGAAAATTGTCTTCTTGGggccaggtgtggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacctgaggtcaggggctcgagaccagcctgaccaacatggtgaaaccccgtctctacctaaaatacaaaagtca-gccgggtgtggtggcctgcacccgtagtcccacctacttgggaggctgaggcaggagaatcgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55840852 240 + 60714840 TCAGCCTAAGAATCGAGCTGGTCACAAAATTGTCTTCTTGGggccaggtgtggtggctcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcaggggttcaagacaagcctgaccaacatggtgaaaccccgtctctgcttaaaatacaaaagtca-gctgggtgtggtggcctgcacgtgtagtcccagctacccgggaggctgaggcaggagaattgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102605583 240 - 106955855 TCAGCGTAAGAATCGGGCTGGTCAGAAAATTGTCTTCTTGGggccaggtgtggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcaggggcttgagaccagcctgaccaacatggtggaaccccgtctctacttcaaatacaaaagtta-gccgggtgtggtggcgtgcacctgtagtcccacctactcgggaggctgaggcaggagaatcac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59896791 240 + 64156825 TCAGCCTAAGAATCGGACTGGTCAGAAAATTGTTCTCTTGGggccaggcgtggtggcttatgcctgtaatcccagcacgttgggaggctgaagcaggcggatcacctgagttcaggggcttgagagcagcatgaccaacatggtgaaaccctgtctctacttaaaatagaaaagtta-gccgggtgtggtggcatgcacctgtagtcccagctactcaggaggctgaggcaggagaatcgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54914212 240 + 59248254 TCAGCCTAAGAATCGGACTGGTCAGAAAATTGTTCTCTTGGggccaggcgtggtggcttatgcctgtaatcccagcacgttgggaggctgaagcaggcggatcacctgagttcaggggcttgagagcagcatgaccaacatggtgaaaccctgtctctacttaaaatagaaaagtta-gccgggtgtggtggcatgcacctgtagtcccagctactcaggaggctgaggcaggagaatcgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47033153 240 + 51301725 TCAGCCTAAGAATCGGACTGGTCAGAAAATTGTCTtcttggggccaggcgtggtggtttatgcctgtaatcccagcactttgggaggctgaagcgggcggatcacctgagttcaggggCTTGAGagcagcatgaccaacatggtgaaaccctgtctctacttaaaatagaaaagtta-gccgggtgtggtggcatgcacctgtagtcccagctactcaggaggctgaggcaggaggatcgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46746485 240 + 50890351 TCAGCCTAAGAATCGGACAGGTCAGAAAATTGTTCTCTTGGggccaggtgtggtggcttatgcctgtaatcccagcactttgggaggctgaagcgggcggatcacctgagttcaggggcttgagagcagcatgaccaacatggtgaaaccctgtctctacttaaaatagaaaagtta-gccgggtgtggtggcatgtacctgtagtcccagctactcaggaggctgaggcaggagaatcgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45323685 241 + 49145316 TCAGCCTAAGTACAGAGCTGGTCAGAAAATTGTCCTCTTGGggccgggtgtggtggctcatgcctgtaatcccaccactttgggaggcagaggcaggcggatcacctgagatcaggggttcgagaccagcctgaccaacatggtgaaaccctgtctctacttaaaatacaaaaattaggccgggcacagtggctcacgcctgtaatcccaacactttgggatgccaagacaggcagatcac i calJac3.chr22 C 0 I 366 e canFam3.chr1 19480837 176 - 122678785 I a score=109663.000000 s hg38.chr19_GL949747v2_alt 37621 37 + 729520 ttgaacctgggagacggaggttgcagtgagcccagat s panTro4.chr19 58974423 37 + 63644993 ttgaacctgggagacggaggttgcagtgagcccagat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55841092 37 + 60714840 ttgaacccgggaggcggagattgcaatgagcccagat i ponAbe2.chr19 C 0 I 257 s nomLeu3.chr10 102605823 37 - 106955855 ttgaacctgggaggcggaggttgcagtgagcccagat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59897031 37 + 64156825 ttgaacctgggaggtggaggttgcagtgagctgagat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54914452 37 + 59248254 ttgaacctgggaggtggaggttgcagtgagctgagat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47033393 37 + 51301725 ttgaacctgggaggtggaggttgcagtgagccgagat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46746725 37 + 50890351 ttgaacccgggaggtggaggttgcagtgagctgagat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45324292 37 + 49145316 ttgagcctgggaggcagaggttgcagtgagccaaggt i calJac3.chr22 I 366 C 0 e canFam3.chr1 19480837 176 - 122678785 I a score=88540.000000 s hg38.chr19_GL949747v2_alt 37658 37 + 729520 cacgccattgcactccagcctgggctacagagtgaga s panTro4.chr19 58974460 37 + 63644993 catgccattgcactccagcctgggctacagagtgaga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102605860 37 - 106955855 cacgccattgcactccagcctgggctacagagtgaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59897068 37 + 64156825 cacgccattgcactccagcctgggccatagagtgaga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54914489 37 + 59248254 cacgccattgcactccagcctgggccatagagtgaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47033430 37 + 51301725 cacaccattgcactccagcctgggccatagagtgaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46746762 37 + 50890351 cacaccattgcactccagcctgggccatagagtgaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45324329 37 + 49145316 cacaccattgcactacagcctggatgacagagtgaga i calJac3.chr22 C 0 C 0 e canFam3.chr1 19480837 176 - 122678785 I e ponAbe2.chr19 55841129 257 + 60714840 I a score=47356.000000 s hg38.chr19_GL949747v2_alt 37695 19 + 729520 ctctgtctcataaataaaT s panTro4.chr19 58974497 19 + 63644993 ctctgtctcataaatacat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102605897 19 - 106955855 ctgtgtctcataaataaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59897105 19 + 64156825 ctctgtctcataaataaat i rheMac3.chr19 C 0 I 134 s macFas5.chr19 54914526 19 + 59248254 ctctgtctcataaataaat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47033467 19 + 51301725 ctctgtctcataaataaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46746799 19 + 50890351 ctctgtctcataaataaat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45324366 19 + 49145316 gcctgtctcgaaaaaaaaa i calJac3.chr22 C 0 C 0 s canFam3.chr1 19481013 19 - 122678785 ctatctctcatgaataaat i canFam3.chr1 I 176 C 0 e ponAbe2.chr19 55841129 257 + 60714840 I a score=-7844.000000 s hg38.chr19_GL949747v2_alt 37714 16 + 729520 -GCatacatacataaat s panTro4.chr19 58974516 16 + 63644993 -acatacatacatacat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102605916 5 - 106955855 -aaata----------- i nomLeu3.chr10 C 0 I 2 s macFas5.chr19 54914545 16 + 59248254 -aaaTACagagagagag i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47033486 16 + 51301725 -agagagagagagagag i papAnu2.chr19 C 0 I 119 s chlSab2.chr6 46746818 16 + 50890351 -aaaTACagagagagag i chlSab2.chr6 C 0 I 4 s calJac3.chr22 45324385 1 + 49145316 --------------g-- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19481032 16 - 122678785 aaaatcttaaaaaaaa- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55841129 257 + 60714840 I e rheMac3.chr19 59897124 134 + 64156825 I a score=-2337.000000 s hg38.chr19_GL949747v2_alt 37730 9 + 729520 -------aaataaata s panTro4.chr19 58974532 2 + 63644993 -------aa------- i panTro4.chr19 C 0 C 0 s macFas5.chr19 54914563 2 + 59248254 -------ag------- i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47033621 2 + 51301725 -------aa------- i papAnu2.chr19 I 119 C 0 s chlSab2.chr6 46746838 2 + 50890351 -------ag------- i chlSab2.chr6 I 4 C 0 s canFam3.chr1 19481048 9 - 122678785 aagaAAGAA------- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55841129 257 + 60714840 I e calJac3.chr22 45324386 0 + 49145316 C e nomLeu3.chr10 102605921 2 - 106955855 I e rheMac3.chr19 59897124 134 + 64156825 I a score=12570.000000 s hg38.chr19_GL949747v2_alt 37739 12 + 729520 ----------aGAGAGAGAGAG s panTro4.chr19 58974534 7 + 63644993 ---------------gagagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55841386 12 + 60714840 ----------agagagagagag i ponAbe2.chr19 I 257 C 0 s nomLeu3.chr10 102605923 12 - 106955855 ----------AGAGAGACAGAG i nomLeu3.chr10 I 2 C 0 s macFas5.chr19 54914565 12 + 59248254 ----------agagggagagag i macFas5.chr19 C 0 I 35 s papAnu2.chr19 47033623 12 + 51301725 ----------agaaggaaagaa i papAnu2.chr19 C 0 I 7 s chlSab2.chr6 46746840 12 + 50890351 ----------agagagagggaa i chlSab2.chr6 C 0 I 27 s calJac3.chr22 45324386 12 + 49145316 ----------agagagaaagag i calJac3.chr22 C 0 I 1 s canFam3.chr1 19481057 20 - 122678785 AAAACCAATCTGAGGATAAG-- i canFam3.chr1 C 0 C 0 e rheMac3.chr19 59897124 134 + 64156825 I a score=561156.000000 s hg38.chr19_GL949747v2_alt 37751 211 + 729520 ------AAGAAAATTGTCTTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCCTAA-------GCCCAGCCCTCCTCTATTCCGACGGAGGATG-ATGGCAGTACTGCGGTATTTAGCGGCTGCAGACTCGGAGACCCCACAGCAGCTCTGCCTTTCCCAGCGGAGTCTG----------TCCCCGTGTCTCTGCAGCGCGGCCTCCTCCTCGCTTGCATGTGGGCGGCAGAACTCA--------- s panTro4.chr19 58974541 211 + 63644993 ------aagaaaaTTGTCTTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCCTAA-------GCCCAGCCCTCCTCTATTCCGACGGAGGAGG-ATGGCAGTACTGCAGTATTTAGAGGCTGCAGACTCGGAGACCCCACCGCAGCTCTGCATTTCCCAGCGGAGTCTG----------TCCCCGTGTCTCTGCAGCGTGGCCTCCTCGTCGCTTGCATGCGGGCGGCAGAACTCA--------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55841398 210 + 60714840 ------aAATAAAATGTCTTTTTGCTCA--------------------------CAGCCTTG----------CACCCTGTAAATTCTTAA-------GCCCAG-CCTTCTCTATTCCGACGGAGGATG-ATGGCAGTACTGCGGTATTTAGTGGATACAGACTCAGAGACCCCACCGCAGCTCTGCATTTCCCAGCGGAGTCTG----------TCCCTGTGTCTCTGCAGCGCGGCCTCCTTGTCACTTGCATGTGGGCAGCAGAACTCA--------- i ponAbe2.chr19 C 0 I 6 s nomLeu3.chr10 102605935 210 - 106955855 ------AAGAAAATTGTCCTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCTTAA-------GCCCAGTCCTCCT-TATTCCGACGGAGGATG-ATGGCAATACTGCGGTATTTAGTGCATACAGACTCGGAGACCCCACCGCAGCTCTGCATTTCCCAGCGGAGTCTG----------TCCCCGTGTCTCTGCAGCGCGGCCTCCTCGTGGCTTGCATGTGGGCGGCAGAACTCA--------- i nomLeu3.chr10 C 0 I 6 s rheMac3.chr19 59897258 217 + 64156825 ------AAGGAAATTGTCTTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCTTAA-------GCCCAGCCCTCCTCTATTCCGACGGAGGATGCCTGGCAATACTGCGGTATTTAGCGAGTGCAGACTTGGAGACCCCACCGGAGTTCTGCATTTCCCAGCGGAGTAAGCA-AG--GCCTCCCCGTGTCT--GCAGCGCGGCCTCCTGGTCGCTTGCATGTGGGCGGCAGAACGCA--------- i rheMac3.chr19 I 134 I 11 s macFas5.chr19 54914612 219 + 59248254 ------aaggaaaTTGTCTTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCTTAA-------GCCCAGCCCTCCTCTATTCCGACGGAGGATGCCTGGCAATACTGCGGTATTTAGCGAGTGCAGACTTGGAGACCCCACCGGAGTTCTGCATTTCCCAGCGGAGTAAGCA-AG--GCCTCCCCGTGTCTCCGCAGCGCGGCCTCCTGGTCGCTTGCATGTGGGCGGCAGAACGCA--------- i macFas5.chr19 I 35 I 2 s papAnu2.chr19 47033642 200 + 51301725 ------aaggaaattgtCTTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCTTAA-------GCCCAGCCCTCCTCTATTCCAACGGAGGATGCATGGCAATACTGCGGTATTTAGCGGGTGCAGACTCGGAGAC--------------------CCCAGCGGAGTAAGCAGAG--GCCTCCCCGTGTCTCTGCAGCGCGGCCTCCTGGTCGCTTGCATGTGGGCGGCAGAACTCA--------- i papAnu2.chr19 I 7 I 2 s chlSab2.chr6 46746879 220 + 50890351 ------aaggaaATTGTCTTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCTTAA-------GCCCAGCCCTCCTCTATTCCGACGGAGGATGCATGGCAATACTGCGGTATTTAGCGAGTGCAGACTTGGAGACCCCACCGGAGTTCTGCATTTCCCAGGGGAGTAAGCAGAG--GCCTCCCCGTGTCTCTGCAGCGCGGCCTCCTCGTCACTTGCAAGTGGGCGGCCGAACTCA--------- i chlSab2.chr6 I 27 I 11 s calJac3.chr22 45324399 217 + 49145316 ------aagaaaACTGACTTTTTGCCCA--------------------------TAGCCTTG----------CACCCCGTAGATTCTGAA-------GCCCAGCCCTC---TATGCCAAGGGAGGATGCATGACTGTGCTGCGGCATTCAGCAGAGACAGGCTGGGAGGTCCCACCGGAGCTCGGCACTGCCCAGCGGAGTAAGCAAGG--CTGCCCCTGTGTCTCTGCAGCATGGCCTCCTTGTGGCTTCCATGTGGGCAGCAGAACTCA--------- i calJac3.chr22 I 1 I 6 s canFam3.chr1 19481077 275 - 122678785 GCTGGTCAGAAAATTTTCTTTTCATTCATTGTCCCCAGACATAGCCCTTTTCTGTAGTCTTGGTCTGTACCCAAACCTACAGCTCCACACCCTATGTGCCCTGCCCTCCTATATGCCAACAAACATTC-ATGGCAAGACTG--ATATTTGGACAAATAAAGTTTGGAGAACTCATGGGAGCTCTGCATTTCTCAGCTGAGTAAACGAGGGTGTCACCCCACGTCTCTGAACCTCA--CTTCCCATCTCCTGTGTGCGAGCACCAGAACAGAGGCATGTCA i canFam3.chr1 C 0 C 0 a score=-565.000000 s hg38.chr19_GL949747v2_alt 37962 5 + 729520 CAGAA s panTro4.chr19 58974752 5 + 63644993 CAGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55841614 5 + 60714840 CGACG i ponAbe2.chr19 I 6 C 0 s nomLeu3.chr10 102606151 5 - 106955855 CGACG i nomLeu3.chr10 I 6 C 0 s macFas5.chr19 54914833 5 + 59248254 CAGGG i macFas5.chr19 I 2 I 4 s papAnu2.chr19 47033844 5 + 51301725 CAGGG i papAnu2.chr19 I 2 I 4 s calJac3.chr22 45324622 5 + 49145316 CGGTG i calJac3.chr22 I 6 C 0 s canFam3.chr1 19481352 2 - 122678785 TA--- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46747099 11 + 50890351 I e rheMac3.chr19 59897475 11 + 64156825 I a score=1488230.000000 s hg38.chr19_GL949747v2_alt 37967 477 + 729520 CCCACAGCCCAGA-----CCCACCCACCGCAGGTGTGCAACACCTGGAAGTCATTACTTCCACACACCGCATTTCCACCTGGACTGCCACTCCCACATGAGTTTTTCTCACCAGCCCAAGCCCATTCGTCCCAGTCCTGGA-GACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGCGGTCATAGCGTCCCTTCTGCCAGAACCAAGGCCCCGCCTTGGGTTTT-ACC-CTTCAAAGG-CGGAGCGGGACTGGGCCGGCCGCAGCTCTCCGGCTGCCCGGTTCGTCCCCAGGATGTGCAGATAGAGGAGGTTTTGCTCTGACACTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCACAACCGACTCAGGAAACAAGAAGCCGTCGATGATAACTTCTTCCCCATGAATCCGGTGTGTGTGGCCCCA-------CCCGCCCGAGCTCTGTCCTACCTTATCTGAAGTTCTG-CCAAGA-GTTTTCTGTAAA s panTro4.chr19 58974757 477 + 63644993 CCCACAGCCCAGA-----CCCACCCACCGCAGGTGTGCAACGCCTGGAAGTCATTACTTCCACACACCGCATTTCCACCTGGACTGCCACCCCCACACGAGTTTTTCTCATCAGCCCAAGCCCATTCGTCCCAGTCCTGGA-GACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGCGGTCATAGCGTCCCTTCTGCCAGAACCAAGGCCCCGCCTTCGGTTTT-ACC-CTTCAGAGG-CGGAGCGGGACTGGGCCGGCCGCAGCTCTCCGGCTGCCCGGTTCGTCCCCAGGATGTGCAGATAGAGGAGGTTTTGCTCTGACACTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCACAACCGACTCAGGAAACAAGAAGCCGTCGATGATAACTTCTTCCCCATGAATCCGGTGTGTGTGGCCCCA-------CCCGCCCGAGCTGTGCCCTACCTTATCTGAAGTTCTG-CCAAGA-GTTTTCTGTAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55841619 477 + 60714840 CCCACAGCCCAGA-----CCCACCCACCACAGGTGTGCAACGCCTGGAAGTTGTTACTTCCACACACCGCATTTCCACCTGAACTTCCACTCCCACATGAGTTTTTCTCACCAGCCCAAGCCCATTCGTTCCAGTCCCGGA-GACTCACCGAGGCAAAGCAGGGAAAGTAATTCTGTAGTCATAGCGTCCCTTCTGCCAGAACCAAGGCCCCACCTTCGGTTTT-ACC-CTTCAAAGG-CGGAGAGGGACTGGGGCAGCCGCAGCTCTCTGGATGCCCGGTTCGTCCCCAGGATGTGCAGGTGGAGGAGGTTTTGCTCTGACACTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCACAACCGACTCAGGAAACAAGAAGCCGTCGATGACAACTTCTTCCCCATGAATCCGGTGTGTGTAGCCCCA-------CCCGCCCGAGCTCTGTCCTACCTTATCTGAAGTTCTG-CCAAGA-GTTTTCTGTAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102606156 478 - 106955855 CCCACAGCCCAGA-----CCCACCTACCGCAGGTGTGCAACGCATGGAAGTCATTACTTCCACACACCGCATTTCCACCTGGACTTCCACTCCCACATGAGTTTTCCTCACCAGCCCAAGCCCATTCGTCCCAGCCCTGGAGGACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGTGGTCATAGCGTCCCTTCTCCCAGAACCAAGGCCCCGCCTTCGGTTTT-ACC-CTTCAAAGG-CGGAGCGGGACTGGGGCGGCCGCAGCTCTCTGGCTGCCCGGTTCGTCCCCAGGATGTGCAGATGGAGGAGGTTTTGCTCAGACACTGTGGTTCTCTGCC-CCACTCTTGCAGTTCCCTTCTCACAACCGACTCAGGAAACAAGAAGCCGTCGATGACAACTTCTTCCCCCTGAATCCGGTGTGTGTGGCCCCA-------CCCGCCCAAGCTCTGTCCTACCTTATCTGAAGTTCTG-CCAAGA-GTTTTCTGTAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59897486 473 + 64156825 CCCCCAGCCCAGA-----CCCACCCACTGCAGGTGTGCAACGCGTGGAAGTCATTACTTCGACACACCGCATTTCCACCCGGACTTCCACTCCCCCATGAGTTTTTCGCACCAGCCCAAGCCCATTCGTCCCAGTCCTGGA-GACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGTGGTCATAGCGTCCCTTGGGCCAGAACCAAGGCCCCGCCTTGGGTTTT-ACCACTTCAAAGG-CGGAGCCGGACTGGGGCGGCCGCAGCTCTCTGGCTGCCCGGTTCCTCCCCAGGATGTGCAGATGGAGGAGGTTTTGCCCTGACGCTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCA-AACCGACTCAGGAAACAAGAAGCCGTCGATGACAACTTCTTCCTCATGAATCC--TGTGTGTGGCCACA-------CCCGCCTGAGCTCTGTCCTACCTTATCTGAAGTTCTG-CCAAGA---CTTCTGCAAA i rheMac3.chr19 I 11 C 0 s macFas5.chr19 54914842 473 + 59248254 CCCCCAGCCCAGA-----CCCACCCACCGCAGGTGTGCAACGCGTGGAAGTCATTACTTCCACACACCGCGTTTCCACCCGGACTTCCACTCCCCCATGAGTTTTTCGCACCAGCCCAAGCCCATTCGTCCCAGTCCTGGA-GACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGTGGTCATAGCGTCCCTTGGGCCAGAACCAAGGCCCCGCCTTCGGTTTT-ACCACTTCAAAGG-CGGAGCCGGACTGGGGCGGCCGCAGCTCTCTGGCTGCCCGGTTCCTCCCCAGGATGTGCAGATGGAGGAGGTTTTGCCCTGACGCTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCA-AACCGACTCAGGAAACAAGAAGCCGTCGATGACAACTTCTTCCTCATGAATCC--TGTGCGTGGCCCCA-------CCCGCCTGAGCTCTGTCCTACCTTATCTGAAGTTCTG-CCAAGA---CTTCTGCAAA i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47033853 467 + 51301725 CCCCCAGCCCAGA-----CCCACCCACCGCAGGTGTGCAACGCGTGGAAGTCATTACTTCCACACACCGCGTCTCCACCCGGACTTCCACTCCCCCATGAGTTTTTCGCACCAGCCCAAGCCCATTCGTCCCGGTCCTGGA-GACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGTGGTCATAGCGTCCCTTGGGCCAGAACCAAGGCCCCACCTTCGGTTTT-ACCACTTCAAAGG-CGGAGCGGGACTGGG------GCAGCTCTCTGGCTGCCCGATTCCTCCCCAGGATGTGCAGATGGAGGAGGTTTTACCCTGACGCTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCA-AACCGACTCAGGAAACAAGAAGCCGTCGATGACAACTTCTTCCTCATGAATCC--TGTGTGTGGCCCCA-------CCCGCCTGAGCTCTGTCCTACCTTCTCTGAAGTTCTG-CCAAGA---CTTCTGcaaa i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 46747110 472 + 50890351 CCCCCAGCCCAGA-----CCCACCCACCGCAGGTGTGCAACGCGTGGAAGTCGTTACTTCCACACACCGCGTTTCCACCCGGACTTCCACTCCCCCATGAGTTTTTCGCACCAGCCCAAGCCCATTCGTCCCAGTCCTGCA-GACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGTGGTCATAGCGTCCCTTGGGCCAGAACCAAGGCCCCGCCTTCGGTTTTAACCACTTCAAAGG-CGGAGCGGGACTGGGGCGGC--CAGCTCTCTGGCTGCCCGGTTCCTCCCCAGGATGTGCAGATGGAGGAGGTTTTACCCTGACGCTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCA-AACGGACTCGGGAAACAAGAAGCCGTCGATGACAACTTCTTCCTCATGAATCC--TGTGTGTGGCCCCA-------CCCGCCTGAGCTCTGTCCTACCTTCTCTGAAGTTCTG-CCAAGA---CTTCTGCAAA i chlSab2.chr6 I 11 C 0 s calJac3.chr22 45324627 443 + 49145316 CTCGCAGCCCAGC-----CTCACCCACCACAGG---------CGTGGAAGTCATTCCTTCCAAACACGGCCTTTCCACCTGGACTTCC-------CCTGAG-------CCCCTGTCCAAGCCCACATGTCCCAGTCTTGGA-GACTCACCGAGGCAAAGCACGGAGAGGAATTCTGTGGTCATAGTGACCCTTCTGCCAGAACCAATACCCCACGCTTGGCTTT-ACC-CTTTGGAGG-TGGAGCGGGACTGGGGTGGCCGTGGCTCCCTGGCTA-CCGCTTCGTCCCCAGGCTGTGCAGGTGGA-GAGGCTTCGCCCTGACGCTCTGGTTCTCTACC----------CAGTTTCCTTCTCACAGCCGACTTAGGAAACAAGAAACCGTTGATGACAACATCTTCCCCATGAGTCTGGTGTGTGTGGCCCCA-------CCCGCCTGAGCCGAGTCCTGCCTTATCTGAAGTTCTG-CCAAGA-CTTTTCTGTAAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19481354 462 - 122678785 -CCACAGCCCACAAAACTCTGACAGGTAGCATGTGTCCAGTACACAGAAGACATCATTT----------------CACATCAACCCCCGCTTCACCGTGAA-TTTTCTCACCCACCCAAACCCATCTGTCCCAGTCCTGGA-GACTCACCAAGGCAAAGCAGGGACAGGAATTCTGTGAGCATAGTGTCCCTTCCACCCAGAACAAAATCCCGTCTTCAGTTTT-ATA-GTTCAAAGGAAGAAGGGGGACTGGGCCATC-GAGGCTCCCT-CCTGCCCACCTTGTCTCCAAGATGTGTGGGTA---AAGGTTTTACCCTGACACT-TGGTTCTCCACTGCCTGGTGTACAGTTTCCTTTTCACAATCAAGTCAGGAAA-------CCATCAGTGACAACATCTCCCTCATAAATCCGGTGTGTATGGCTCCAGCTCCACCCACCCTGAGACCTGTCCTATCTCATTTGAAGTCTTGACCAAGACATTTTCTTTAAA i canFam3.chr1 C 0 I 47883 a score=80697.000000 s hg38.chr19_GL949747v2_alt 38444 30 + 729520 TGTAATTTTTTATTTTAAAACACTAATACC s panTro4.chr19 58975234 30 + 63644993 TGTAATTTTTTATTTTAAAACACTAATACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55842096 30 + 60714840 TGTAATTTTTTATTTTAAAACATTAATACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102606634 30 - 106955855 TGTAATTTTTAATTTTaaaatattaatact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59897959 30 + 64156825 TGTAATGTTTTATTTTAAAGCGTTAATACC i rheMac3.chr19 C 0 I 11 s macFas5.chr19 54915315 30 + 59248254 TGTAATGTTTTATTTTAAAGCATTAATACC i macFas5.chr19 C 0 I 367 s papAnu2.chr19 47034320 30 + 51301725 tgtaatgttttattttaaagcattaataCC i papAnu2.chr19 C 0 I 363 s chlSab2.chr6 46747582 30 + 50890351 TGTAATGTTTTATTTTAAAGCATTAATACC i chlSab2.chr6 C 0 I 11 s calJac3.chr22 45325070 29 + 49145316 TGTAGT-TTTTATTTTACAACATTAATACC i calJac3.chr22 C 0 I 2055 e canFam3.chr1 19481816 47883 - 122678785 I a score=22893.000000 s hg38.chr19_GL949747v2_alt 38474 44 + 729520 ggccggacgcggtggctcacgcctgtaatcccagcaccttgaga s panTro4.chr19 58975264 44 + 63644993 ggccggacgcggtggctcacgcctgtaatcccagcaccttgaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55842126 44 + 60714840 ggccaggcgcggtggctcacacctgtaatcccagcactttgaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102606664 44 - 106955855 ggccaggcgcggtggctcgtgcctgtaatcccagcactttgaga i nomLeu3.chr10 C 0 I 2757 e canFam3.chr1 19481816 47883 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747612 11 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59897989 11 + 64156825 I a score=38645.000000 s hg38.chr19_GL949747v2_alt 38518 154 + 729520 ggctgaggcgggcggatcacctgaggtcgggagttcaagaccagcctgaccaaaatggagaaacccccgtctctactaaaaatacaaaattagccaggcatggtggcgcatgcctgtaatcccagctactccggaggctgagacaggagaatgg s panTro4.chr19 58975308 154 + 63644993 ggctgaggcgggcggatcacctgaggtcgggagttcaagaccagcctgaccaaaatggagaaacccccgtgtctactaaaaatacaaaattagccaggcatggtggtgcatgcctgtaatcccagctactccggaggctgagacaggagaatgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55842170 152 + 60714840 ggctgaggcaggcggatcacctgaggtcgggagttcaagaccagcctgaccaaaatggataaa-ccccgtctcaattaaaaatacaaaattagctagccat-atggcgcacgcctgtaatcccagctactccagaggctgagacaggagaatGG i ponAbe2.chr19 C 0 I 4912 e canFam3.chr1 19481816 47883 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102606708 2757 - 106955855 I e chlSab2.chr6 46747612 11 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59897989 11 + 64156825 I a score=11238.000000 s hg38.chr19_GL949747v2_alt 38672 130 + 729520 cttgaacccaggaggcggaggttgctgtgagccaagattgtgccactgcactccagcctggacaacaacggtgaaactgtctcaaacaagcaaacaaacaaaCATTAATACCTATAGCTTTATAGCTTCC- s panTro4.chr19 58975462 131 + 63644993 cttgaacccaggaggcggaggttgctgtgagccaagattgcgccactgcactccagcctgggcatcaacggcgaaactgtctcaaacaagcaaacaaacaaaTATTAATACCTATAGCTTTATAGCTTCCT i panTro4.chr19 C 0 C 0 e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102606708 2757 - 106955855 I e chlSab2.chr6 46747612 11 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59897989 11 + 64156825 I a score=18125.000000 s hg38.chr19_GL949747v2_alt 38802 33 + 729520 GTGTACCCACTAGCCAGCTCCCCACAATGTTAA s panTro4.chr19 58975593 33 + 63644993 GTGTACCCACTAGCCAGCTCCCCACAATGTTAA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59898000 33 + 64156825 GTGTACCCACTAGCCAGCTCCCCACAAGGTTAA i rheMac3.chr19 I 11 I 329 s chlSab2.chr6 46747623 33 + 50890351 GTGTACCCACTAGCCAGCTCCCCACAAGGTTAA i chlSab2.chr6 I 11 I 215 e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102606708 2757 - 106955855 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I a score=79743.000000 s hg38.chr19_GL949747v2_alt 38835 906 + 729520 CCTTTTTTT------------GGGGGGCGGG--GGGgacagagtcttgctctgtcacccaggctggagtgcagtggcgcgatctcggctcactgcaacctctgcctcatgggtttaaggattctcctgcctcagactcccaagtagctgggattacaagcatgcaccaccacacccagctaattttttgtagagatgggatttcaccatgtgggccaggctggtcttgaactcctggtctctagtgacccgcccacctcagcctcccaaagtgctgggattacaggcataagccactgtgcccggccaatggtaatctcttataattacagtactttttttttttttttttttttttgagacagaatctctgtcagccaggctggagtgcagtggcacaatcttggctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcagcctcccgagttgccgggatgacaggtgtccgccaccactcttggctaattttttttgttctttttagtagaaacgaggttttgccatgttgcccaggctggtctcgaacttctgacctcaggcgatccgcctgcctcggcctcccaaactgctgggattacaggcgtgagccaccacgcccggcgtatggcacattttcaaaaccagagactttgcactggcatcacacgtttaaccaggttccagaggtcactcagatctcaccagtttgtgcataattcgtttctctttttctcttccTCTTCCttctatttctatttccttttctccttttccttcttttctcctgctcttcctcctcttccaccttcttttcctcctccCTTTTCTTTGCCTATGGGTATAGTTCTGTAACATTTTATTGCCTGTatgtatggctttatagaaccaccgccacaatcaagac s panTro4.chr19 58975626 919 + 63644993 CCTTTTTTTTGGCGGGGGGGGGGGGGGTGGGGCGGGgacagagtcttgctctgtcacccaggctggagtgcagtggcgcaatctcggctcactgcaacctctgcctcatgggtttaatgattctcctgcctcagactcccaagtagctgggattacaagcatgcaccaccacacccagctaattttttgtagggatgggatttcaccatgtgggccaggctggtcttgaactcctggtctcaagtgactcgcccacctcagcctcccaaagtgctgggattacaggcataagccactgtgcccggccaatggtaatctcttataactacagtac-tttattttttatttttttttttgagacagaatctctgttgcccaagctggagtgcagtggttcaatcttggctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcagcctcccaagttgctgggatgacaggcgcccgccaccgctcttggctaatttttttcgttctttttagtagaaacgaggttttgccatgttgcccaggctggtctcaaacttctgacctcaggcgatccgcctgcctcggcctcccaaactgctgggattacaggcgtgaaccaccgcgcccggcgtatggtacattttcaaaaccagagactttgcactggcaccacacttttaaccaggttccagaggtcactcagatctcaccagtttcggcataattcgtttctctttttctcttccTCTtccttctatttctatttccttttctccttttccttcttttctcctgctcttcctcctcttccaccttcttttcctcctccGTTTTCtgtgcctatgggtatagttctgtaacattttattgcctgtatgtatggctttatagagccaccgccacaatcaagac i panTro4.chr19 C 0 C 0 e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102606708 2757 - 106955855 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I a score=0.000000 s hg38.chr19_GL949747v2_alt 39741 505 + 729520 acagaactgtcccaccaccacgtaggaactccctcatgctgcccctttataatcgctctcccaccctagcacctgctaatctgttctacgtctctatcactttgtcactttgagactcttgtataaatggaatcgtccatcgcctcaccttctgagggtgacctttttcactcagcacaatgcctgtgagattcattcaaatggttgtgtgtTATGATGATGGATACattagccgggcgtggtggcacacgcccatagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagatcacgccactgcactccagcctgggtcacagagcaagactccatcaaaaaaaaagaattatctaatggatacaatgtgtgtcactgggttagtggatacctgaaagccctaacttcatcattttggaatctatccatgcaataaagttacacttgtaccccataaaCGTAtacaa e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102606708 2757 - 106955855 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I e panTro4.chr19 58976545 0 + 63644993 C a score=9528.000000 s hg38.chr19_GL949747v2_alt 40246 361 + 729520 ataaaaaataatcgtctgggcatgatgacttaccgctgtaatcccagcactttgggaggctgaggcggga---------------------------ttacaggtgtgagcc---accatgcc---------cggccT-------------ATACTTTCTATCTTAATAACTACAAAAATAATAACTTGCTGGATGGGTCCCTGTGCCCA-CCCCGTCCT--GTCCTAAGTGAGGAGGATGGGAAGAA---AGCCATCGTCCTGTCCTGGTGCGGCTCTCAA-ACAGCTGGAAATGCTGGCTGCACAGGAAACT-CTAAGGATCGGCAGCTCTAGCGCATGCTACCCTTGGCAGCTGTGTGGTCTGTGGATAGAGAAGGACCAACCTGTGGTTAGTGG---AGGAAGAGGAGGAATATTGCTTT s nomLeu3.chr10 102609465 405 - 106955855 acaaaaattaa----ctgggcgtggtggcaggtgcctgtaatcccagcgactcgggaggctaaggcaggagaatcgcttaaacccaggaggtggaggttgcag---tgagccgagatcttgccattgcactgcagcctgggtgacagagtgagact--ccgtctcaaaaa--aaaaaagtatta--------ggtggctcattgtgcccagttctgtcctccgtccccagtgagaagtacaggaagaaGAAAGCCACCATCCTTCCCTAGAGCAGATCCCAATAGAGCTTAGAGTGCAGGTTCCACAGAAAGCAGTTAAGGCTCAGCTGGTCCAACCCATCATTCCCCGGGCAGCTGTGGGATCTATGGATAGAGAAGGACAGAGCTGAGCTTAGAGGGGAAGGAAGGGGATGAAGACTGTTTT i nomLeu3.chr10 I 2757 T 1379 e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I e panTro4.chr19 58976545 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949747v2_alt 40607 578 + 729520 GATAAGCACATCCTCAGAGTTATAACAGAGGAGACAATAGTTATAAAATAAGAATGATATTTACGAAAAATAATAAGACTATTAACAAGAAACAGCAACAAATCTTGAAAACAAAATGTAACAACAAAACATAAATGTTGACtttttttttttttttttttttgagacggagtctcgctctgtcgcccaggctgcagtgcagtggtgagatctcggctcactgcaacctctgcctcccgggttccagcaattctcctgcctcagcctcctgagtagctgggattacaggcatgcaccaccacgcccagctaatttttgtatttttagtagagatggggtttcaccatattggccaggatggtctcgatctcttgaccttgtgatccgcccacctcggcctcccagagtgctgggattataggcatgagccacagcacctggcAACTGTTGACATTTTACATCTGCACCAGTAAGACTGGCTACCAATTACAAGCAAATGGATGCCATGGATAGAATGGAATTCCTGCCAAACTGGGTAAAATGTTGGAAACATATAAAATAAAATGTAAAAGAAATGT e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102609870 1379 - 106955855 T e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I e panTro4.chr19 58976545 0 + 63644993 C a score=74650.000000 s hg38.chr19_GL949747v2_alt 41185 850 + 729520 ATTATAAATACAggctgggcgtggtggctcatgcctgtaatcccagcactttgggaagccaaggtgggcagatcacttgaggtcaggagttcgagaccagcctcgccaacatggtgaaaccccgtctctactaacacacaaaaattagccaggcatggtggtgggcgcctgtaatcccagctacttgagaggctgaggcaggagagtcacttgaacctgagagggaggttgcagtgagctgaaattacgccactgcactccagcctgggtgacagagtgagactccctctccaaaaaaaaa------gaaagaaagaaTGTATTATAAATACATATgaccaagcacagtggctaacgcctgtagtcctggcactttgggaggccaagatgagaggatcacttgagtccaagagttcgagaccaagttgggccatatggtggaacccggcttctacaaaaaatacaaaatttagtccggcatgatggcacacacctgtggtcccagctactcagaaggctgagatgggaggattactttagcctgggaggtcgaggctgcagtgagccgtgatctagccactacactccagcctgggcgacagagtgagaccctgtctcaaaataaataaatataataaataaataaataTGTATATCCCAATATTGGACTAAATGCTGGTCCAGAAGCACAAAATAGAAAGAACGGAGAGGAAGTATTAATAAATATTACACAGGAAGCAATGTTTTTCCCTTCGTGTGGAGGAAGAGTTCCCCGCAGGTGAGAGTCACCTACTACTCAATCTGACTCTGAAGTTTTAAGTATTGATTCAAGTTATCAAaaatgtattaagggctg s nomLeu3.chr10 102608491 852 - 106955855 ATTATAAATACAggctgggcatggtggctcatgcctgtaatcccagcactttgggaagctgaggtgggcagatcacttgatgtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaacacataaaaattagccgggcatggtggtgggcgcctgtaatcccagctacttgagaggctgaggcaggagaatcacttgaacctgagagggaggttgcagtgagctgaaattacaccactgcactccagcctgggtgaaagagcgagactccctctccaaaaaaaaaaaaaaagaaagaaagaaTGTATTATAAATACATATgaccaaacacagtggctaacgcctgtagtcctggcactttgggaggccaagatgagaggatcactcgagtccaagagttcgagaccaggttgggcaatatggtggaaccccgcttctacaaaaaatacaaaatttagccaggcgtgatggcacacacctgtggtcccagctactcagaaggatgagataggaggattgctttagcctgggaggtcgaggctgcagtgagccgtgatctagccactgcactccagcctgggtgacagagtgagaccctgtctcagaataaataaatataataaataaaTAG----GTATATCCCAATATTGGACTAAATGCTGGTCCAGAAGCACAAAATAGAAAGAATGGAGAGGAAGCGTTAATAAATATTATACAGGAAGCAATGTTTCTCCCTTCATGTGGAGGAAGAGTTCCCCGCAGGTGAGAGTCACCTACTACTCAATCTGACTCTGAAGTTTTAAGTATTGATTCAAGTTATCAAaagtgtattaagggctg i nomLeu3.chr10 T 1379 C 0 e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I e panTro4.chr19 58976545 0 + 63644993 C a score=78705.000000 s hg38.chr19_GL949747v2_alt 42035 307 + 729520 ggcacggtgactcaagcctgcaatcccagcactttgggaggccgaggtgggctgatcacttgagctcaggtgttcaagaccagcctggccaacatgggtgaaaccccatctctactaaaagtacaaaaattagctgggcatggtggcaggcgcctgtaatcccagcgacttgggaggctaaggcaggagaatcgcttaaacccaggaggtggaggttgcagtgagccgagatcttgccattgcactgcagcctgggtgacagagcgagactccgtctcaaagaaaaaaaaaaaaa------gtattacgtggc s ponAbe2.chr19 55847234 313 + 60714840 ggcacggtggctcaagcctgcaatcccagcactttgggaggccgaggtgggtggatcacttgagctcaggagttcaagaccagcctggccaacatgggtgaaaccctgtctctactaaaagtacaaaaattagctgggcgtggtggcaggcgcctgtaatcccagcgactcgggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccgaaatcttgccattgcactgcagcctgggtgacagagcgagactccgtctcaaaaaaaaaaaaaaaaaaaaaaaGTATTAGGTGGC i ponAbe2.chr19 I 4912 C 0 s nomLeu3.chr10 102609343 301 - 106955855 ggcatggtggctcaagcctgcaatcccagcactttgggaggcagaggtggggtgatcacttgagctcaggagttcaagaccagcttggccaacaccggtgaaaccccatctctactaaaagtacaaaaattaactgggcgtggtggcaggtgcctgtaatcccagcgactcgggaggctaaggcaggagaatcgcttaaacccaggaggtggaggttgcagtgagccgagatcttgccattgcactgcagcctgggtgacagagtgagactccgtctcaaaaaaaaaaa------------gtattaggtggc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19481816 47883 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I e panTro4.chr19 58976545 0 + 63644993 C a score=32813.000000 s hg38.chr19_GL949747v2_alt 42342 83 + 729520 tcattgtgcccaattctgtcctctgtccccagtgaaaagtacaggaagaaGAAAGCCACCATCCTGCCCTACAGCAGATCCCA s ponAbe2.chr19 55847547 83 + 60714840 TCATTGTGCCCAGTTCTGTCCTCTGTCCCCAGTGAAAAGTACAGGAAGAAGAAAGCCACCATCCTGCCCTAGAGCAGATCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102609644 83 - 106955855 tcattgtgcccagttctgtcctccgtccccagtgagaagtacaggaagaaGAAAGCCACCATCCTTCCCTAGAGCAGATCCCA i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19529699 81 - 122678785 TCTTTATGCCCAGGTCTGTCCTCTGCCCCAGCTGAGGAGTACCG--AAGAGGAAACCATCATCTTGTCCTCAAGTACCTCTCA i canFam3.chr1 I 47883 C 0 e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I e panTro4.chr19 58976545 0 + 63644993 C a score=146613.000000 s hg38.chr19_GL949747v2_alt 42425 232 + 729520 ACAGAGCTGAGAGTGCAGGTTCCACAGAAAGCGGTTAAGGCTCAGCTGGTCCA-----------ACCCATCATT-CCCTGGGCAGCTGTGGGATCTATGGCTAGAGAAGAACAGAGCTGAGCTTAGAGGGGAAGGAAGAGGAGGAAGATTGTTTTCTCCCGGCATCCAAACACAGCTTTTCAACCAGGGGGAGCACCACCCTCACTTCCCATCGCCC-CATCCAGGGATATTTGA-AAGGTATGAG s panTro4.chr19 58976545 231 + 63644993 acagagcTGAGAGTGCAGGTTCCACAGCAGGCGGTTAAGGCTCAGCTGGTCCA-----------ACCCATCATT-CCCTGGGCAGCTGTGGGATCTATGGCTAGAGAAGGACAGAGCTGAGCTTAGAAGGGAAGGAAGAGGAGGAAGATTGTTTTCTCCCGGCATCTAAACACAGCTTTTCAACC-GGGGGAGCACCACCCTCACTTCCCATTGCCC-CATCCAGGGATATTTGA-AAGGTATGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55847630 228 + 60714840 ATAGAGCTGAGAGTGCAGGTTCCACAGAAAGCGGTTAAGGCTCAGCTGGTCCA-----------ACCCATCATT-CCCTGGGCAGCTGTGGGATCTA-GGATAG---AGGACAGAGCTGAGCTTAGAGGGGAAGGAAGCGGAGGAAGATTGTTTTCTCCCGGCATCCAAACACAGCTTTTCAACCAGGGGGAGCACCACCCTCACTTCCCATCGCCC-CATCCAGGGATATTTGA-AAGGTATGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102609727 232 - 106955855 ATAGAGCTTAGAGTGCAGGTTCCACAGAAAGCAGTTAAGGCTCAGCTGGTCCA-----------ACCCATCATT-CCCCGGGCAGCTGTGGGATCTATGGATAGAGAAGGACAGAGCTGAGCTTAGAGGGGAAGGAAGGGGATGAAGACTGTTTTCTCCTGGCATCCAAACACAGCTTTTCAACCACGGGGAGCACCACCCTCACTTCCCATCGCCC-CATCCAGGGATATTTGA-AAGGTATGAG i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19529780 234 - 122678785 ACAGGGGTGAGAATGAATGTTCCACTGGAAGCTGTTCAAGGTCAGTGGGTTTAACTGGATCAACACCCATCATTCCCCTGGGCAGCTAAGGAGCCTATAAGTACAGAAGGACAGAGAGAGGTC---AGGGGAGGGAGGAAGAGAAAGATTA-TTTCTCCTGGCCTCCAAACACAGGTTATCCACC------AGAAATACCCT-GCTCCGCATCATCTATATCTAGGGATGTCTGAGAAAGTAAAC- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I a score=15648.000000 s hg38.chr19_GL949747v2_alt 42657 22 + 729520 AGTAGTGGCTTTTTTGTTGTTG s panTro4.chr19 58976776 22 + 63644993 AGTAGTGGCTTTTTTGTTGTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55847858 17 + 60714840 AGTAGCGGCTTTTTTGT----- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102609959 21 - 106955855 AGTAGTGGCTGTTTTGTTTGT- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54915712 18 + 59248254 AGTAGTGGCTTTTTTTTC---- i macFas5.chr19 I 367 C 0 s papAnu2.chr19 47034713 17 + 51301725 AGTAGtggctttttttc----- i papAnu2.chr19 I 363 C 0 s canFam3.chr1 19530014 22 - 122678785 AGTACTTGTTTGTTTTTTTTTT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747656 215 + 50890351 I e rheMac3.chr19 59898033 329 + 64156825 I a score=346230.000000 s hg38.chr19_GL949747v2_alt 42679 132 + 729520 TTGTTTCACA-ATAATTAGGTCTCCAACAGGTGTTCAATGGGAAAGGAAGTATTAGCAATGTCGAGTTACGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGGACTATTGCACTTTAAACACCATT s panTro4.chr19 58976798 132 + 63644993 TTGTTTCACA-ATAATTAGGTCTTCAACAGGTGTTCAATGGGAAAGGAAGTATTAGCAATGTCGAGTTACGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGGACTATTGCACTTTAAACACCATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55847875 132 + 60714840 TTGTTTCACA-ATAATTAGGTCGTCAACAGGTGTTCAATGGGAAAGGAAGTATTAGTAATGTTGAGTTACGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGGATTATTGCACTTTAAACCCCATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102609980 132 - 106955855 TTGTTTCACA-ATAATTAGGTCTTCAACAGGTGTTCAATGGGAAAGGAAGTATTAGCAATGTCGAGTTACGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGAACTATTGCACTTTAAACACCATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59898362 132 + 64156825 TTGTTTCACA-ATAATTGGGTCTTCAACAGGTGTTCAATGGGAAAGGAAGTATTAGCAATGTCGAGTTATGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGAACTATTGCACTTTAAACACGATT i rheMac3.chr19 I 329 C 0 s macFas5.chr19 54915730 132 + 59248254 TTGTTTCACA-ATAATTGGGTCTTCAACAGGTGTTCAATGGGAAAGGAAGTATTAGCAATGTCGAGTTATGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGAACTATTGCACTTTAAACACGATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47034730 132 + 51301725 ttgtgtcacA-ATAATTGGGTCTTCAACAGGTGTTCAATGGGAAAGGAAGTATTAGCAATGTCGAGTTATGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGAACTATTGCACTTTAAACACGATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46747871 132 + 50890351 TTGTTTCACA-ATAATTGGGTCTTCAACAGGTGTTCAATGGGAAAGGAAGTCTTAGCAATGTCGAGTTATGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGAACTATTGCACTTTAAACACGATT i chlSab2.chr6 I 215 C 0 s canFam3.chr1 19530036 123 - 122678785 -CCTTCCACCTTTAATGTCGGTTTTAGTTGGTGTTTTACAGGGAGGGAA--AATAG-------ATGCTAAGTGTTTCTATAACCAATGGGACAATCAAACATGGTAAAGAAATAATCTCACCTAAAGGCCATT i canFam3.chr1 C 0 I 103 e calJac3.chr22 45325099 2055 + 49145316 I a score=1132441.000000 s hg38.chr19_GL949747v2_alt 42811 504 + 729520 TGTggccatgcccggtggtgcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggccaggagttcgagaccagcctgaccaatgtggcgaaaccccgtctctcct---------------------------aaaaatac-----aaaaaaattagccagatggtggcaggtgcctgtagttgcagccacttgggaggctgaggcaggagaatcacttgaacctggcaggcggaggttgcaatgagccgagatcgcaccactgcactctggcctgggcgacaaagcgagactctgtctcaaaacaaacaaacaaacaaaaaaacaaaaaATACCATTTGTGCCCATGTGGAGAAACGTGTGAAGTCCCCATGGTAGAGTCTGATGTTTAAAGAACCCCA-TATGgattgaatgcacagc-agggcggctacagttcacaaggctgcactgggtaattacaatttgctaagaaggtggatcttaaACAGAAAGGTCCATAAGCTAGATTGAGATAACCATT s panTro4.chr19 58976930 503 + 63644993 TGTggccatgcccggtggcgcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggccaggagttcgagaccagcctgaccaatgtggcgaaaccctgtctctcct---------------------------aaaaatac-----aaaaaaattagccggatggtggcaggtgcctgtagttgcagctactcgggaggctgaggcaggagaatcacttgaacctggcaggcggaggttgcaacgagccgagatcgcaccactgcactctggcctgggcgacagagcaagactctgtctcaaaacaaacaaacaaacaaaaaa-caaaAAATACCATTTGTGCCCATGTGGAGAAATGTGTGAAGTCCCCATGGTATAGTCTGATGTTTAAAGAACCCCA-CATGgattgaatgcacagc-agggccgctacagttcacaaggctgcactgggtaattataatttgctaagaaggtggaccttaaACAGAAAGGTCCATAAGCTAGATTGAGATAACCATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55848007 531 + 60714840 TGTGGCCCCCCCcggtggcgcccccctttaatcccaccactttgggggggtgaggcagggggatcacttgaggccaggagtttgagaccagcctggccaatggggggaaaccctgttttttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa-----aaaaaaataagctggatggtggcaggtgcctgtagttgcagctacttgggaggctgaggcaggagaatcacttgaacctggcaggcggaggttgcaatgagctgagatcgcaccactgcactctggcctgggcgacagagtgagactctgtctcaaaacaaacaaacaaacaaaaaaacaaaAAATACCATTTGTGCCCATGTGGAGAAACATGTGAAGTCTCCATGGTAGAGTGTAATGTTTAAAGAACCCCG-TATGgattgaatgcacagc-agggcggctacagttcacaaggctgcaccgggtaattgcaatttgctaagaaggtggatcttaaACAGAAAGGTCCATAAGCTAGATTGAGATAACCATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102610112 500 - 106955855 TGTggccacgcctggtggcgcacacctgtaatcccagcattttgggaggctgaggcaggtggatcacttgaggccaggagttcgagaccagcctggccaatgtagcgaaaccccgtctctact---------------------------aaaaatag-----aaaaaaattagccagatggtggcaggtgcctgtagttgcagctacttaggaggctgaggcaggagaatcacttgaacctggcaggcagaggttgcaatgagccgagattgcaccattgcactctggcctgggtggcagagtgagactctgtctcaaaacaaacaaacaaaaaaacaa-----aaaTACCTTTTGTGCCCATGTGGAGAAACATGTGAAGTCCCCATGGTAGAGTCTGATGTTTAAAGAACCCCATTATGgattgaatgcacagc-agggcggctacagttcacaaggctgcactgggtaattagaatttgctaagaaggtggatcttaaACAGAAAGGTCCATAAGCTAGATTGAGATAACCATT i nomLeu3.chr10 C 0 I 111 s rheMac3.chr19 59898494 495 + 64156825 TGTggtcaggcgcagtggcgcatgcctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggccaggaggtcgagaccagcctggccaatgcggcgaaactccgtctctact---------------------------caaaatac-----aaaaaaat-ggctgaatggtggcaggtgcccgtagttgcagccactcaggaggctgaggcaggagaatcacttgaccccaggaggcggaggttgcaatgagccgagatcgtgccactgcactctggcctgggcgacagagcgagagtctgtctca----aaacaaacaaacaaacaa----aaaaTACCATTTGTGCCCATGTGGAGAAATGTGTGAAGTCCCCATGGTAGAGTCTGATGTTTAAAGAACCCCA-TATGgattgaatgcacagcaagggcggatacagttcacaaggctgcactgggtaattacaatttgctaagaaggtggatcctaaACAGAAAGGTCCATAAGCTAGATTGAGATAATCAC- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54915862 499 + 59248254 TGTggtcaggcgcagtggcgcatgcctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggccaggaggtcgagaccagcctggccaatgcggcgaaactccgtctctact---------------------------aaaaatac-----aaaaaaat-ggctgaatggtggcaggtgcctgtagttgcagctactcaggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcaatgagccgagatcgtgccactgcactctggcctgggcgacagagcgagagtctgtctcaaaacaaacaaacaaacaaacaa----aaaaTACCATTTGTGCCCATGTGGAGAAACGTGTGAAGTCCCCATGGCAGAGTCTGATGTTTAAAGAACCCCA-TATGgattgaatgcacagcaagggcggatacagttcacaaggctgcactgggtaattacaatttgctaagaaggtggatcctaaACAGAAAGGTCCATAAGCTAGATTGAGATAATCAC- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47034862 491 + 51301725 tgtggtcaggcgcagtggcgcatgcctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggccaggaggtcgagaccagcctggccaatgcggcgaaactccgtctctact---------------------------aaaaatac-----aaaaaaat-ggctgaatggtggcaggtgcctgtagttgcagctactcaggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcaatgagccgagatcgtgccactgcactctggcctgggcgacagagtgagagtctgtctca--------aaacaaacaaacaa----aaaataccatttGTGCCCATGTGGAGAAACGTGTGAAGTCCCCATGGCAGAGTCTGATGTTTAAAGAACCCCA-TATGGATTGAATGCACAGCAAGGGCAGATACAGATCACAAGGCTGCACTGGGTAATTGCAATTTGCTAAGAAGGTGGATCCTAAACAGAAAGGTCCATAAGCTAGATTGAGATAATCAC- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748003 504 + 50890351 TGTggtcaggcgcagtggcatatgcctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggccaggaggtcgagaccagcctggccaatgcggcgaaattccgtctctact---------------------------aaaaatacaaaaaaaaaaaat-ggctgaatggtggcaggtgcctgtagttgcagctactcaggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcaatgagccgagatcgtgccactgcactctggcctgggcgacagagcgagagtctgtctcaaaacaaacaaacaaacaaacaa----aaaaTACCATTTGTGCCCATGTGGAGAAACGTGGGAAGTCCCCACGGTAGAGTCTGATGTTTAAAGAACCCCA-TATGgattgaatgcacagcaagggcggatacagttcacaaggctgcactgggtaattgcaatttgctaagaaggtggatcctaaACAGAAAGGTCCATAAGCTAGATTGAGATAATCAC- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=99728.000000 s hg38.chr19_GL949747v2_alt 43315 43 + 729520 GTCACAATGAGTGAAATTTCTTCCTCGGCACACAATTAATTAC s panTro4.chr19 58977433 43 + 63644993 GTCACAATGAGTGAAATTTCTTCCTCGGTACACAATTAATTAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55848538 43 + 60714840 GTCACAATTAGTGAACTTTCTTCCTTAGTACACAATTAATTAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102610723 43 - 106955855 GTCACAATTAGTGAAATTTCTTCCTTGGTACACAATAAATTAC i nomLeu3.chr10 I 111 T 111 s rheMac3.chr19 59898989 43 + 64156825 GTTACAATTAGTGAAATTTCTTCCTTGGTACACAATTAATTAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54916361 43 + 59248254 GTTACAATTAGTGAAATTTCTTCCTTGGTACACAATTAATTAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47035353 43 + 51301725 GTTACAATTAGTGAAATTTCTTCCTTGGTACACAATTCATTAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748507 43 + 50890351 ATTACAATTAGTGAAATTTCTTCCTTGGTACACAATTAATTAC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=4108.000000 s hg38.chr19_GL949747v2_alt 43358 4 + 729520 TTAG s panTro4.chr19 58977476 4 + 63644993 TTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55848581 4 + 60714840 TTAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59899032 4 + 64156825 TTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54916404 4 + 59248254 TTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47035396 4 + 51301725 TTCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748550 4 + 50890351 TTCG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102610766 111 - 106955855 T a score=167865.000000 s hg38.chr19_GL949747v2_alt 43362 68 + 729520 TTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAAGTCCATTAGCTACATTGTGATAATCAT s panTro4.chr19 58977480 68 + 63644993 TTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAAGTCCATTAGCTACATTGTGATAATCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55848585 68 + 60714840 TTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAAGTCCATTAGCTACATTGTGATAATCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102610655 68 - 106955855 TTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAAGTCCATTAGCTACATTGTGACAATCAT i nomLeu3.chr10 T 111 T 111 s rheMac3.chr19 59899036 67 + 64156825 TTAGTAGGAAAGTTCCCAG-AGGTGGATCTTAAACAGAAAGGTCCATTAGCTACATTGTGATAATCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54916408 67 + 59248254 TTAGTAGGAAAGTTCCCAG-AGGTGGATCTTAAACAGAAAGGTCCATTAGCTACATTGTGATAATCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47035400 68 + 51301725 TTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAGGTCCATTAGCTACATTGTGATCATCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748554 68 + 50890351 TTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAGGTTCATTAGCTACATTGTGATAATCAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=442165.000000 s hg38.chr19_GL949747v2_alt 43430 195 + 729520 GTCACAATTAGTGAAATTTCTTCTTTGGTACACAATTAATTATTTAGTAGGGAGGTTCCCAGAAGGTGGATCTTAAACAGAAAGGTTCGTTAGCT-ACATTGTGATACTCATGTCACAATCAGTGAAATTTCTTCCTTGGTACACAATAAATTACTTAGTAGGAGGGTTCCCCACCCGTAGGCTTATGGGGGTATA s panTro4.chr19 58977548 195 + 63644993 GTCACAATTAGTGAAATTTCTTCTTTGGTACACAATTAATTATTTAGTAGGGAGGTTCCCAGAAGGTGGATCTTAAACAGAAAGGTTCGTTAGCT-ACATTGTGATACTCATGTCACAATCAATGAAATTTCTTCCTTGGTACACAATAAATTACTTAGTAGGAAGTTTCCCCACCCGTAGGCTTATGGGGGTATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55848653 195 + 60714840 GTCACAATTAGTGAAATTTCTTCCTTGGTACACAATTAATTATTTAGTAGGGAGGTTCCCAGAAGATGGATCTTAAACAGAAAGATTCATTAGCT-ACATTGTGATAATCATGTCACAATTAGTGAAATTTCTTCCTTGGTACACAATAAATTACTTAGTAGGAGGGTTCCCCACTCGCAGGTTTATGGGGGTATA i ponAbe2.chr19 C 0 I 9 s nomLeu3.chr10 102610612 195 - 106955855 GTCACAATTAGTGAACTTTCTTCCTTAGTACACAATTAATTACTTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAAGTCCATTAGCT-ACATTGTGACAATCATGTCACAATTAGTGAAATTTCTTCCTTGGTACACAATAAATTACTTAGCAGGAGGGTTCCCCACTCGTAGGTTTATGGGGGTATA i nomLeu3.chr10 T 111 C 0 s rheMac3.chr19 59899103 194 + 64156825 GTCA-AATTAGTGAAATTTCTTCGTTGGTGCAAAATAAATTATTTAGTAGGAAAGGTCCCAGAAGGTGGATCTGAAAGAGAAAAGTCCATTAGTT-ACATTGTGATAATCACATCACAATTAGTGAAATTTCTTCCTTGGCACACAATAAATTACTTAGTAGGAGGGTTCCCCACTTGTAGGTTTATGGGGGTATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54916475 195 + 59248254 GTCACAATTAGTGAAATTTCTTCCTTGGTGCAAAATAAATTATTTAGTAGGAAAGGTCCCAGAAGGTGGATCTGAAAGAGAAAAGTCCATTAGTT-ACATTGTGATAATCACATCACAATTAGTGAAATTTCTTCCTTGGCACACAATAAATTACTTAGTAGGAGGGTTCCCCACTTGTAGGTTTATGGGGGTATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47035468 195 + 51301725 GTCACAATTAGTGAAATTTCTTCCTTggtgcaaaataaattatttagtagGAAAGGTCCCAGAAGGTGGATCTTAAAGAGAAAAGTCCATTAGTT-ACATTGTGATAATCACATCACAATTAGTGAAATTTCTTCCTTGGCACACAATAAATTACTTAGCAGGAGGGTTCCCCACTTGTAGGTTTATGGGGGTATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748622 191 + 50890351 GTCACAATTAGTGAAATTTCTTCCTTGGTACAAAATAAATTATTTAGTAGGAAAGGTCCCAGAAGGTGGATCTTA-----AAAAGTCCATTAGTTAACATTGTGATAATCACATCACAATTAGTGAAATTTCTTCCTTGGCACACAATAAATTACTTAGTAGGAGGATTCCCCACTTGTAGGTTTATGGGGGTATA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=110265.000000 s hg38.chr19_GL949747v2_alt 43625 63 + 729520 ATTGATAAATCAAAATGGAAtatatcaaaacatcacgttgtacacaaatataactccattttt s panTro4.chr19 58977743 63 + 63644993 ATTGATAAATCAAAATGGAAtatatcaaaacatcacgttgtacacaaatataactccattttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102610807 60 - 106955855 ACTGACAAATCGAAATGGAAtatatcaaaacatcatgttgtacacaaatataactccatt--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59899297 63 + 64156825 ATTGACAAATCAAAATGGAAtatataaaaacatcacgttgtacacaaatataattccattttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54916670 63 + 59248254 ATTGACAAATCAAAATGGAAtatataaaaacatcacgttgtacacaaatataattccattttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47035663 63 + 51301725 ATTGACAAATCAAAATggaatatatcaaaacatcacgttgtacacaaatataattccattttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748813 63 + 50890351 ATTGACAAATCAAAATGGAAtatatcaacacatcacgttgtacacaaatataattccattttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e ponAbe2.chr19 55848848 9 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I a score=493674.000000 s hg38.chr19_GL949747v2_alt 43688 207 + 729520 atttgtcgattagatctcaataaatctggaGCAGAAGAGAATTCCATATCTCTACAGCAGCCCATGAAAGAGAGAGGGGATCCGTGTTTTAACTTGGATCtgttactggaaaggggtcccagtccagaccccaagagagggttctcggatctcacacaagtaagaactcagggtgagtacacagagtaaagtgaaggcaagtttatt s panTro4.chr19 58977806 207 + 63644993 atttgtcgattagatctcaataaatctggaGCAGAAGAGAATTCCATATCTCTACAGCAGCCCATGGAAGAGAGAGGGGATCCGTGTTTTAACTTGGATCtgttactggaaagaggtcccagtccagaccccaagagagggttctcggatctcacacaagtaagaactcagggtgagtacacagagtaaagtgaaggcaagtttatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55848857 207 + 60714840 GTTTGTTGATTAGATCTCAATAAATCTGGAGCAGAAGAGAATTCCGTATCTCTACAGCAGCCCATGAAAGAGAGAGGGGCTCTGTGTTTTAACTTGGATCtgttactggaaaggggtcccagtccagaccccaagagagggttctcggatctcacacaagtaagaactcagggcgagtacacagagtaaagcgaaagcaagtttatt i ponAbe2.chr19 I 9 C 0 s nomLeu3.chr10 102610867 205 - 106955855 -tttgtcgattagatctcaataaatctggaGCAGAAGAGAATTCCGTATCTCTACAGCAGCCCAGGAAAGAGAGAGGGGCTCCATTTTTTAACGTGGATCtgttactggaaagggttcccagtccagaccccaagagagggttcttggatctcacacaagaaagaactcagggcgagtccacggagttta-tggaagcaagtttatt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59899360 207 + 64156825 atttgtcgattagatctcaatacatctagaGCAGAAGAGAATTCCCTATCTCTACAGCAGCCCATGAAAGAGAGAGGGGCTCCGTGTTTTAACTTGGATCtgttattggaaaggggtcccagtccagaccccaagagagggttctcggatctcagacaagaaagaactcagggcgagtccacggagtgaaatgaaagcaagtttatt i rheMac3.chr19 C 0 I 317 s macFas5.chr19 54916733 207 + 59248254 atttgtcgattagatctcaatacatctagaGCAGAAGAGAATTCCCTATCTCTACAGCAGCCCATGAAAGAGAGAGGGGCTCCGTGTTTTAACTTGGATCtgttattggaaaggggtcccagtccagaccccaagagagggttctcggatctcagacaagaaagaactcagggcgagtccacggagtgaaatgaaagcaagtttatt i macFas5.chr19 C 0 I 407 s papAnu2.chr19 47035726 207 + 51301725 atttgtcgaTTAGATCTCAATACATCTAGAGCAGAAGAGAATTCCCTATCTCTACAGCAGCCCATGAAAGTGAGAGGGGCTCCGTGTTTGAACTTGGATCTGTTATTGGAAAGGGGTCCcagtccagaccccaagagagggttctcgGATCTCAGACAAGAAAGAACTCAGGGCGAGTCCAcggagtaaagtgaaagcaagtttatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748876 207 + 50890351 atttgtcgattagatctcaatacatctagaGCAGAAGAGAATTCCCTATCCCTACAGCAGCCCATGAAAGAGAGAGGGGCTCCGTGTTTTAACTTGGATCtgttattggaaaggggtcccagtccagaccccaagagagggttctcggatctcagacaagaaagaactcagggcaagtccacggagtgaagtgaaagcaagtttatt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=830533.000000 s hg38.chr19_GL949747v2_alt 43895 341 + 729520 aagaaagtcaaggaatatggctgctccataggcagagcagtccagagggctgtcagtcggctatttttgtggttatttcttgatcgtatgctaaacaaggggtggactgttcatgagttttccaggaaaggggaggggatttccctggaactgagagtccctccc-tcgtttagcttctggaagttgccatggcatctgtaagctgtcttggtggcggtgggagtgtcttttagcatgcaaatgcattataattagcaaataatgtgcagtgaggacgaccagaagtcacttttgttgccatcttggatttggcaggttttggctggcttctttgttgcatc s panTro4.chr19 58978013 341 + 63644993 aagaaagtcaaggaatatggctgctccataggcagagcggtccagagggctgtcagtcggctatttttgtggttatttcttgatcgtatgctaaacaaggggtggactgttcatgagttttccaggaaaggggaggggatttccctggaactgagagtccctccc-tcgtttagcttctggaagttgccatggcatctgtaagctgtcttggtggcggtaggagtgtcttttagcatgcaaatgcattataattagcaaataatgcgcagtgaggacgaccagaagtcacttttgttgccatcttggatttggcaggttttggctggcttctttgttgcatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55849064 341 + 60714840 aagaaagtcaaggaatatggctgctccataggcagagcggtccagagggctgtcggtcggctatttttatggttatttcttgatcatatgctgaacaaggggtggactgttcatgagttttccaggaaaggggaggggattttcctggaactgagagttcctccc-tcgtttagcttctggaagttgccatggcatctgtaagttgtcttggtgccagtgggagtgtcttttagcatgcaaatgcattataattagcaaataatgtgcagtgaggacgaccagaagtcacttctgttgccatcttggatttggcaggttttggctggcttctttattgcatc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102611072 341 - 106955855 aagaaagtcaaggaatatggctgctccataggcagagcggtccagagggctgtcggtcggctgtttttgtggttatttcttgatcgtatgctaaacaaggggtggactgttcatgaattttccaggaaaggggaggggatttccctggaactgagagttcctccc-tcgtttagcttctggaagttgccatggcatctgtaagctgtcttggtgctggagggagtgtcttttagcatgcaaatgcatcataattagcaaataatgtgcagtgaggatgaccagaagtcacttttgttgccatcttggatttggcaggttttggctgacttctttattgcatc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59899884 342 + 64156825 aagaaagtcaaggactatggctgctccacaggcagagcagtccagagggctgtcggtcagctatttttgtggttatttctcgatcatatgctaaacaaggggtggactgttcatgagttttccaggaaagggcaggggatttccctggaactgagagttcctccctttttttagcttctagaagttgctatggcatctgtaagccgccttggtggtggtgggagtgtcttttagcatgcaaaggcattataattagcaaataatgtgcagtgaggacaaccagaagtcactattgttgccatcttggttttggcaggttttggctggcttctttattgcatc i rheMac3.chr19 I 317 C 0 s macFas5.chr19 54917347 342 + 59248254 aagaaagtcaaggactatggctgctccacaggcagagcagtccagagggctgtcggtcggctatttttgtggttatttctcgatcatatgctaaacaaggggtggactgttcatgagttttccaggaaagggcaggggatttccctggaactgagagttcctccctttttttagcttctagaagttgctatggcatctgtaagccgccttggtggtggtgggagtgtcttttagcatgcaaaggcattataattagcaaataatgtgcagtgaggacaaccagaagtcactattgttgccatcttggttttggcaggttttggctggcttctttattgcatc i macFas5.chr19 I 407 C 0 s papAnu2.chr19 47035933 341 + 51301725 aagaaagtcaaAGACGATGgctgctccataggcagagcagtccAGAGGGCTGTCGGTCGgctatttttgtggttatttctcGATCATATGCTAAGCAAGGGGTGGACtgttcatgagttttccaggaaaggggaggggatTTCCCTGGAACTGAGAGTTCCTCCC-CCTATTAGCTTCTGGaagttgccatggcatctgtaagccgccttggtggtggtgggagtgtcttttagcatgcaaatgcattataattagcaaataatgtgcagtgaggacaaccagaagtcactattgttgccatcttggttttggcaggttttggctggcttctttattgcatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46749083 341 + 50890351 aagaaagtcaaggactatggctgctccacaggcagagcagtccagagggctgtcggccggcgatttttgtggttatttctcgatcatatgctaaacaaggggtggactgttcatgagttttccaggaaaggggaggggatttccctggaactgagagttcctcct-ccttttagcttctagaagttgctatggcatctgtaagccgccttggtggtggtgggagtgtcttttagcatgcagatgcgttataattagcaaataatgtgcagtgaggacaaccagaagtcacttttgttgccatcgtggttttggcaggttttggctggcttctttattgcatc i chlSab2.chr6 C 0 I 26 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=7736.000000 s hg38.chr19_GL949747v2_alt 44236 11 + 729520 tttg--tgtcttt s panTro4.chr19 58978354 11 + 63644993 tttg--tgtcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55849405 11 + 60714840 tttg--tgtcttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102611413 11 - 106955855 tttg--tgtcttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59900226 13 + 64156825 tctcttttttttt i rheMac3.chr19 C 0 I 11 s macFas5.chr19 54917689 12 + 59248254 tctc-tctttttt i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47036274 11 + 51301725 tctc--ttttttt i papAnu2.chr19 C 0 I 11 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46749424 26 + 50890351 I a score=366991.000000 s hg38.chr19_GL949747v2_alt 44247 144 + 729520 gggtctttgtgacctgtatgttgtgacctgtctcatcctgtgacttagaaagcctcaaccccctgggaatgcagtccagcaggttgcagcctcagtttacccagccccggttcaagatggagtcactctggtttgaaggcctct---- s panTro4.chr19 58978365 144 + 63644993 gggtctttgtgacctgtatgttgtgacctgtctcatcctgtgacttagaaagccttaaccccctgggaatgcagtccagcaggttgcagcctcagtttacccagccccggttcaagatggagtcactctggtttgaaggcctct---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55849416 148 + 60714840 gggtctttgtgacctgtgtgttgtgacccgtctcatcgtgtgacttagaaagccttaaccccctgggaatgcagtccagcaggttgcagcctcagtttacccggccccggttcaagatggagtcactctggtttgaaggcctctgaca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102611424 148 - 106955855 gggtctttgtgacctgtatgttgtgacctgtctcatcctgtgacttagaaagccttaaccccctgggaatgcagtccagcaggttgcagcctcagtttacccagccccggttcaagatggagtcactctggtttgaaggcctccgaca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59900250 148 + 64156825 gggtctttgtgatctgtatgttgtaacctgtctcatcctgtgacttagaaagtcttaaccccctgggaatgcagtccagcaggtagcagcctcagtttacccagccccggttcaagatggagtcactctggtttgaaggcctctgaca i rheMac3.chr19 I 11 C 0 s macFas5.chr19 54917712 148 + 59248254 gggtctttgtgatctgtatgttgtaacctgtctcatcctgtgacttagaaagtcttaaccccctgggaatgcagtccagcaggtagcagcctcagtttacccagccccggttcaagatggagtcactctggtttgaaggcctctgaca i macFas5.chr19 I 11 C 0 s papAnu2.chr19 47036296 148 + 51301725 ggGTCTTTGTGATCTGTATGTTGTgacctgtctcatcctgtgacttagaaagTCTTAACCCCCTGGGAATGCAGTCCAGCAGGTtgcagcctcagtttacccagcCCCggttcaagatggagtcactctggtttgaaGGTCTCTGACA i papAnu2.chr19 I 11 C 0 s chlSab2.chr6 46749450 148 + 50890351 gggtctttgtgatctgtatgttgtgacctgtctcatcctgtgacttagaaagtcttaaccccctgggaacacagtccagcaggttgcagcctcagtttacccagccccagttcaagatggagtcactctggtttgaaggtctctgaca i chlSab2.chr6 I 26 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=442040.000000 s hg38.chr19_GL949747v2_alt 44391 157 + 729520 gaTTCACCTGGAGACACATTCCGGCTGTACCAGGCCTCCACCAGGAAAGCTCCCATGATAACCACAATTACGGCAGCCAGACCCAGTCGTACGAAGTTACCCAGGGAGTAGTTGCTCGATGTGGTACCTGGGGGAACTGAAAGAGAGAAGGGGCTCA s panTro4.chr19 58978509 157 + 63644993 gaTTCACCTGGAGACACATTCCGGCTGTACCAGGCCTCCACCAGGAAAGCTCCCATGATAACCACAATTATGGCAGCCAGACCCAGTCGTACGAAGTTACCCAGGGAGTAGTTGCTCGATGTGGTACCTGGGGGAACTGAAAGAGAGAAGGGGCTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55849564 157 + 60714840 GATCCACCTGGAGACACCTTCCGGCTGTACCAGGCCTCCACCAGGAAAGCTCCCATGATAACCACAATTATGGCAGCCAGACCCAGTCGTATGAAGTTACCCAGGGTGTAGTTGCTCGATGTGGTATCTGGGGGAACTGAAAGAGAGAAGGGTCTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102611572 157 - 106955855 GATCCACCTGGAGACAACTTCCGGCTGTACCAGGCCTCCATCAGGAAAGCTCCCATGATAACCACAATTATGGCAGCCAGACCCAGTTGTATGAAGTTACTCAGGGTGTAGTTGCTCGATGTGGTACCTGGGGGAACTGAAAGAGAGAAGGGGCTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59900398 157 + 64156825 GATCCACCCGGAGACACCTTTCGGCTGTGCCAGGCCTCCACCAGGAAAGCTCCCATGATAATCAAAATTATGGCAGCCAGACCCAGTCGTATGAAGTTACCCAGGGTGTAGTTGCTTGACGTGGTACCTGGGGGAACTGAAAGAGAGAAGGGGATCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54917860 157 + 59248254 GATCCACCCGGAGACACCTTTCGGCTGTGCCAGGCCTCCACCAGGAAAGCTCCCATGATAATCAAAATTATGGCAGCCAGACCCAGTCGTATGAAGTTACCCAGGGTGTAGTTGCTTGACGTGGTACCTGGGGGAACTGAAAGAGAGAAGGGGCTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47036444 157 + 51301725 GATCCACCTGGAGACACCTTTCTGCTGTGCCAGGCCTCCACCAGGAAAGCTCCCATGATAACCAAAATCATGGCAGCCAGACCCAGTCGTATGAAGTTACCCAGGGTGTAGTTGCTTGACGTGGTACCTGGGGGAACTGAAAGAGAGAAGGGGCTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46749598 157 + 50890351 GATCCACCTGGAGACACCTTTCGGCTGTGCCAGGCCTCCACCAGGAAAGCTCCCATGATAATCAAAATTATGGCAGCCAGACCCAGTCGTATGAAGTTACCCAGGGTGTAGTTGCTTGACGTGGTACCTGGGGGAACTGAAAGTGAGAAGGGGCTCA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19530262 157 - 122678785 GATCCTTGTGGAGAATCCTCCTGGCTATACCAGGCTTCAGCCAGCAAAATCCCAGTGATAATCAGAAACATGGTAATGAGACACAGCGGGATGAGGTTAACCTTGGTGTAATCCCCCAATGTGGCACCTGGGAAAACTGAAAGAGAGAATGAGATCA i canFam3.chr1 I 103 C 0 e calJac3.chr22 45325099 2055 + 49145316 I a score=256651.000000 s hg38.chr19_GL949747v2_alt 44548 78 + 729520 GCACTGACCCTCAGAGGGTATCCCTCCTTCTCAAATGGCCCCACCAAATCTGACTATCAT-CACCCACTTAATGTTTTC s panTro4.chr19 58978666 78 + 63644993 GCACTGACCCTCAGAGGGTATCCCTCCTTCTCAAATGGCCCCACCAAATCTGACTGTCAT-CACCCACTTAATGTTTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55849721 78 + 60714840 GCACTGACCCTCAGAGGGTATCCCTCCTTCTCAAATGGCCCCACCAAATCTGACTATCAT-CACCCACTTAATGTTTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102611729 77 - 106955855 GCACTGACCCTCAGA-GGTATCCCTCCTTCTCAAATGGCCCCGCCAAATCTGACTCTCAT-CACCCACTTAATGTTTTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59900555 78 + 64156825 GCACTGACCCTCAGAGTGTATCCCTCCTTCTCAAATGGCCCCGTCAAATCTGACTGTCAT-CACCCACTTAATGttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54918017 78 + 59248254 GCACTGACCCTCAGAGTGTATCCCTCCTTCTCAAATGGCCCCGTCAAATCTGACTGTCAT-CACCCACTTAATGTTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47036601 78 + 51301725 GCATTGACCCTCAGAGGGTATCCCTCCTTCTCAAATGGCCCCGTCAAATCTGACTGTCAT-CACCCActtaatgttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46749755 78 + 50890351 GCACTGACCCTCAGAGGGTATCCCTCCTTCTCAAATGGCCCCGTCAAATCTGACTGTCAT-CACCCACTTAATGTTTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45327154 78 + 49145316 gCACTGACCCTCAGAGCGTATCCCTCCTTCTCAAACAGTCCCGCCAAATCTCTCTCGCAT-CAGCCACTTCATGTCTTC i calJac3.chr22 I 2055 C 0 s canFam3.chr1 19530419 67 - 122678785 TCACTG-----------GTATCCCTTCTTCTCAAATAGGTCTACCGAATGTGACTCTCACACACCCACTT-GTGTTTCC i canFam3.chr1 C 0 I 1673 a score=849774.000000 s hg38.chr19_GL949747v2_alt 44626 300 + 729520 -------------------------GG----ttttttggtttttttttttgagacggagttttactcttgttgaccaggctggagtgcagtggtgtaatctcagctcaccacaacctctgcctcccaggttcaagc---ctccctgcctcagcctcccaagtagctgggattacaggcatgtgccaccatgcccggctaa--ttttatatttttagtagagacggggtttcgccatgttggccaggctggtcttgaactcccgacctcaggtgacccgcccacctcagcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggcc s panTro4.chr19 58978744 300 + 63644993 -------------------------GG----ttttttggtttttttttttgagacggagttttactcttgttgaccaggctggagtgcagtggtgtaatctcagctcaccacaacctctgcctcccgggttcaagc---ctccctgcctcagcctcccaagtagctgggattacaggcatgtgccaccatgcccagctaa--ttttatatttttagtagagacggggtttcgccatgttggccaggctggtcttgaactcccgacctcaggtgacccgcccacctcagcctcccaaagtgctgggattacaggtgtgagccaccacgcccggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55849799 306 + 60714840 -------------------------GGGGttttttttgtgttttttttttgagacggagttttgctcttgttgaccaggctggagtgcagtggtgtaatctcggctcactgcaacctctgcctcccgggttcaagcaattctcctgcctcagcctcctaagtagctgggattacaggcgtgtgccaccatgcccggctaa--ttttatatttttagtagagacggggtttcgccatgttggtcaggctggtcttgaactcccgacctcaggtgacccgcccacctcagcctcccaaagtgctgggattaca-gtgtaagccacagcgcctcgcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102611806 303 - 106955855 -------------------------GG----Gtttttttgttttgtttttgagatggagttttgctcttgttgcccaggctggagtgcagtggtgcaatctcggctcaccacaacctctgcctccccggttcaagcaattctcctgcctcggcctcccaagtagctgggattatgggcatgtgccaccatgcccggctaa--ttttttatttttagtagagatggggttttgccatgttggtcaggctggtctcgaactcctgacctcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgggagccactgctccttgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59900633 299 + 64156825 -------------------------gg----ttttgggg----tttttttgagacagaattttgctcttgttgcccaggctggagtgcaatggtgcaatctcggctcaccgcaacctctgcctcccgggttcaagcaattctcctgcttcaggctcccaagtagctgggattacaggcatgtgccaccaagcccagctaa--ttttatatttttagtagagacggggttttgccatgttggtcaggctggtctcaaactcccaacctcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatacccggcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54918095 299 + 59248254 -------------------------GG----TTTTGGGG----tttttttgagacggaattttgctcttgttgcccaggctggagtgcaatggtgcaatctcggctcaccgcaacctctgcctcccgggttcaagcaattctcctgcttcagcctcccaagtagctgggattacaggcatgtgccaccaagcccagctaa--ttttatatttttagtagagacggggttttgccatgttggtcaggctggtctcaaactcccaacctcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatacccggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47036679 299 + 51301725 -------------------------gg----ttttgggg----tttttttgagacggagttttgctcttgttgcccaggctggagtgcaatggtacaatctcagctcactgcaacctctgcctcccgggttcaagcaattttcctgcttcagcctcccaagtagctgggattacaggcatgtgccaccaagtccagctaa--ttttatatttttagtagagacagggttttgccatgttggtcaggctggtctcaaactcccaacctcaggtgatccacccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatacccggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46749833 300 + 50890351 -------------------------GG----TTTTGGGG---ttttttttgagacggagttttgctcttgttgcccaggctggagtgcaatggtgcaatctcagctcaccgcaacctctgcctcccggattcaagcaattctcctgcttcagcctcccaagtagctgggattataggcatgtgccaccaagcccagttaa--ttttatatttttagtagagacggggttttgccatgttggtcagactggtctcaaactcccaacctcagttgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtgaaccaccacacctggcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45327232 328 + 49145316 TAGCCAGCAGTCCACTGTACTTTAAAG----TGtttttttttttttttttgagacggagtttcgctcttgttacccaggctggagtgcaatggcgcgatctcggctcaccgcaacctctgcctcctgggttcaggcaattctcctgcctcagcctcccgagtagctgggattacaggcacgtgccaccatgcccagctaagtttttgtatttttagtagagatggggtttcaccatgttgaccaggatggtctcgatctcttgacctc--gtgatccacccgcctcggcctcccaaagtgctgggattattggcgtgagccaccgcgcccggcc i calJac3.chr22 C 0 T 345 e canFam3.chr1 19530486 1673 - 122678785 I a score=96224.000000 s hg38.chr19_GL949747v2_alt 44926 33 + 729520 ACCCACTTAATGTTTTCTAGCCAGTAGTCCACT s panTro4.chr19 58979044 33 + 63644993 ACCCACTTAATGTTTTCTAGCCAGTAGTCCACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55850105 33 + 60714840 ACCTACTTAATGTTTTCTAGCCGGTAGTCCACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102612109 33 - 106955855 ACCCACTTAATGTGTTCTAGCCGATAGTCCACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59900932 33 + 64156825 ACCCACTTAATGTTTTCTAGCCAGTCGTCCACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54918394 33 + 59248254 ACCCACTTAATGTTTTCTAGCCAGTCGTCCACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47036978 33 + 51301725 accCACTTAATGTTTTCTAGCCAGTCGTCCACT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46750133 33 + 50890351 ACCCACTTAATGTTTTCTAGCCACTCGTCCACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45327215 33 + 49145316 AGCCACTTCATGTCTTCTAGCCAGCAGTCCACT i calJac3.chr22 T 345 I 312 e canFam3.chr1 19530486 1673 - 122678785 I a score=1562945.000000 s hg38.chr19_GL949747v2_alt 44959 595 + 729520 GTACTTTAAAGTTTTAATT-----------------GAACttttt-------ttttttcttgagatcaagttttgctcttgttgcccagactggagtgtaatggcacaatctcagctcactacaacctctgcctcccgggttcaagtgattctcctgtctcagcctcccaagcagctgagattatgagcatgtgccaccacacccggctaattt-tgtatttttagtagaga-cggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgatccacccgccttggcctcccaaagtgttgggattataggcataaaccaccatgcctggccATAAT-TGAGCTCTTTA-AAGTTTTAATCCCTGAAAACAAAAGATGGAATCt---ttgttgttgtt--tttgagacgacgtctcactctgttgctcaggctggagtgcagcgacgcagtctcggttcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgaatagctaggattacaggcacctaccaccacacccggctaattttt-----------------gtatttttaatagagatgggttttcgccatgttggccaaactggtttcgaactcctgg s panTro4.chr19 58979077 594 + 63644993 GTACTTTAAAGTTTTAATT-----------------CAACttttt-------ttttt-cttgagatcaagttttgctcttgttgcccagattggagtgtaatggcacaatctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgtctcagcctcccaagcagctgagattatgagcatgtgccaccacacccggctaattt-tgtatttttagtagaga-cggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgatccacccgccttggcctcccaaagtgttgggattataggcataaaccaccatgcctggccATAAT-TGAGCTCTTTA-AAGTTTTAATCCCTGAAAACAAAAGATGGAATCt---ttgttgttgtt--tttgagacgacgtctcactctgttgctcaggctggagtgcagcgacacagtctcggttcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgaatagctaggattacaggcacctaccaccacacccggctaattttt-----------------gtatttttaatagagatgggttttcgccatgttggccaaactggtttcaaactcctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55850138 594 + 60714840 GTGCTTTTATGTTTTAATT-----------------GAACttttt-------ttttt-cttcagatagagtttcgcttttgttgcccaggctggagtgcaatggcacaatctcggctcactgcaacctctgcctcctgggttcaagtgattctcctgcctcagcctcccgagcagctaagattacgagcatgcgccaccacacctggctaattt-tgtatttttagtagaga-tggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtaatctgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatgcctggccATAAT-TGAACTCTTTA-AAGTTATAATCCCTGAAAACAACAGATGGAATCt---ttgttgttgtt--tttgagacaaagtctcgctctgtcgctcaggctggagtgcagagacaaaatcttggctcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgaatagctgggattacaggcacctgccaccacacccggctaattttt-----------------gtatttttagtagagatgggttttcgccatgttggccaaactggtttcaaactcctgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102612142 591 - 106955855 GTACTTTTATGTTTTAATT-----------------GAACttttt-------ttttt-cttgagatggagttttgcttttgttgcccagactggagtgcaatggcgcaatctcggctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcctgagcagctaagattatgagcatgcgccaccacacctggctaattt-tgtatttttagtagaga-cggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgatctgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatgcccggccATAAT-TGAACTCTTTA-AAGTTTTAATCCCTGAAAACAACAGATGGAATCt------ttgttgtt--tttgagatggagtctcgctctgtcacccaggctggagtgcagcgacacaatctcggctcactgcaccctccacctcctgggttcgagtgattctcctgcctcagcctcccgaatagctgggactacaggcacctgccatcacacccggctaattttt-----------------gtattttcagtagagatgggttttcgccatgttggccaaactggtttcaaactcctgG i nomLeu3.chr10 C 0 M 1602 s rheMac3.chr19 59900965 580 + 64156825 GTACTTTAAAGTTTTAATT-----------------GAACtttgt-------ttttt-cttgagatggagttttgctcttgttgcccagacta------ggtggcacaatctcagctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcaacctcccgagtagctgggattacaggcatgagccaccatgcccgactaatttctgtatttttagtagagaggggggtttctccatgttggttgggctggtcttgaactcctgacctcaggtgatctgcccaccctggcctcccaaagt-------------gcatgagccaccatgcccagccATAAT-TGAACTCTTTA-AAATTTTAATCCCTGAAAACAAAAGATGGAATCtttgttgttgttgtt--tttgagaccaagtctcgctctgttgctcaggctggagtgcagtggcacaatcttggcttattgcaacctccacctcccgggttcaagcaattctcctgcctcagcctcctgaatagctgggattacaggcacctgtcaccacgcctggctaattttg-----------------gtatttttagtagagatgggttttcttcatgttggccaaactgatttcgaactcctgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54918427 586 + 59248254 GTACTTTAAAGTTTTAATT-----------------GAACtttgt-------ttttt-cttgagatggagttttgctcttgttgcccagactagagtgcggtggcacaatctcagctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcaacctcccgagtagctgggattacaggcataagccaccatgcccgactaatttctgtatttttagtagagaggggggtttctccatgttggttgggctggtcttgaactcctgacctcaggtgatctgcccaccctggcctcccaaagt-------------gcatgagccaccatgcccagccATAAT-TGAACTCTTTA-AAATTTTAATCCCTGAAAACAAAAGATGGAATCtttgttgttgttgtt--tttgagaccaagtctcgctctgttgctcaggctggagtgcagtggcacaatcttggcttactgcaacctccacctcccgggttcaagcaattctcctgcctcagcctcctgaatagctgggattacaggcacctgtcaccacgcctggctaattttg-----------------gtatttttagtagagatgggttttcttcatgttggccaaactgatttcgaactcctgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47037011 586 + 51301725 GTACTTTAAAGTTTTAAtt-----------------gaactttgt-------ttttt-gttgagatggagttttgctcttgttgcctagactagagtgtggtggcacaatctcagctcactgcaacctctgcctcccgggttcaagcgattatcctgcctcaacctcccgagtagctgggattacaggcatgagccaccatgcccgactaatttctgtatttttagtagagaggggggtttctccatgttggttgggctggtcttgaactcctgacctcaggtgatctgcccaccctggcctcccaaagt-------------gcatgaggcaccatgcccagccataat-tgaactcttta-aaattttaatccctGAAAACAAAAGATGgaatctttgttgttgttgtt--tttgagaccaagtctcgctctgttgctcaggctggagtgcagtggcacaatcttggcttactgcaacctccacctcccgggttcaagcaattctcctgcctcagcctctcgaatagctgggattacaggcatctgtcaccatgtccggctaattttg-----------------gtatttttagtagagatgggttttcttcatgttggccaaactgatttcgaactcctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46750166 582 + 50890351 GTACTTTAAAGTTTTAATT-----------------GAACtttgt-------ttttt-cttgagatggagttttgctcttgttgcccagactagagtgcagtggcacaatctcagctcactgcaacctctggctcccgggttcaagcaattctcctgcctcaacctcccgagtagctgggattacaggcatgagccaccatgcccggctaattt-tgtatttttagtagagaggggggtttctccatgttggttgggctggtcttgaactcctgacctcaggtgatctgcccaccctggcctcccaaagt-------------gcatgagccaccgtgcccagccATAAT-TGAACTCTTTA-AAATTTTAATCCCTGAAAACAAAAGATGGAATCtttgttgttgttgtt--tttgagaccaagtctcgctctgttgctcaggctggagtgcagtggcacaatcttggcttactgcaacctccacctcccgggttcaagcgattctcctgcctcagcctcccgaatagctgggattacaggcacctgtcaccacgcccggctaattttg-----------------atatttttagtagagatgggttttcttcatgttggccaaactgatttcgaa---ctgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45327560 626 + 49145316 GAACTTTAAAGTTTTAATCCCTGAAAACAAGAGACGGAATCttttgttgttgttgtt-gttgagatggagtctccctc-tgttgcccaggctggagtgcagtggcacaatcctggctcactgcaacctccacctcccaggttcaagcaatgctcctgcctcagcctcctaagtggctgagattacaaatgcccgccagcatgcctggctgatttttgtacttttagtagaga-tgacttttcaccatgttggccacactaatctcgaacttctggcctcaggtgacccagcagcctcggcctcccaaagtgctgtgattacgggcatgagccaccgcacctggccAAAATATGGAATCTTAATGAGTTGTAGT----------------GGGAGTTCCttttctttttatttgtctgagacagagtcttgctctgtcacccaggctggagtgcagtggcgtgatctcagttcactgcaacctctgcctcccaggttcaagtgattcccctgcctcagcttcccgagtagctggaactacaggtacacaccaccacgcctggctagttttgtgtgtgtgtgtgtgtgtgtatttttagtagaggcggggttttaccatattggccaggctggtcttgaactcctga i calJac3.chr22 I 312 C 0 e canFam3.chr1 19530486 1673 - 122678785 I a score=98551.000000 s hg38.chr19_GL949747v2_alt 45554 43 + 729520 cctcaagtgattcgcctgcctcggcctcccaaggtgctgggat s panTro4.chr19 58979671 43 + 63644993 cctcaagtgattcgcctgcctcggcctcccaaggtgctgggat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55850732 43 + 60714840 cctcaagtgattcgcctgcctcggcctcccaaagtgctgggat i ponAbe2.chr19 C 0 I 5965 s rheMac3.chr19 59901545 43 + 64156825 ccttaagtgattcgccggccttggcctcccaaagtgctgggat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919013 43 + 59248254 ccttaagtgattcgccggccttggcctcccaaagtgctgggat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47037597 43 + 51301725 cctcaagtgattcgtctgcctcggcctcccaaagtgctgggat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46750748 43 + 50890351 cctcaaatgattcacctgcctcagcctcccaaagtgctgggat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45328186 41 + 49145316 cctca--tgatctgcccgcctcggcctcccaaagtgctgggat i calJac3.chr22 C 0 C 0 e canFam3.chr1 19530486 1673 - 122678785 I e nomLeu3.chr10 102612733 1602 - 106955855 M a score=57794.000000 s hg38.chr19_GL949747v2_alt 45597 45 + 729520 tacaggcctgagccaccgcgcccggccAAGATATGCAATCCTAAT s panTro4.chr19 58979714 45 + 63644993 gacaggcatgagccaccgcgcccagccAAGATATGCAATCCTACT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59901588 45 + 64156825 gacaggcatgagccaccgcacctggccAAAACATGGAATCCTAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919056 45 + 59248254 gacaggcatgagccaccgcacctggccAAAACATGGAATCCTAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47037640 45 + 51301725 gacaggcatgagctaccgcacctggccaaaacatGGAATCCTAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46750791 45 + 50890351 gacaggcatgagccaccgcacctggccAAAACATGGAATCCTAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45328227 27 + 49145316 tataggtgtgagccactgtgcctggcT------------------ i calJac3.chr22 C 0 C 0 e canFam3.chr1 19530486 1673 - 122678785 I e ponAbe2.chr19 55850775 5965 + 60714840 I e nomLeu3.chr10 102612733 1602 - 106955855 M a score=588117.000000 s hg38.chr19_GL949747v2_alt 45642 295 + 729520 GAGTTGTAATGGGAG-TTCCTTTATCTTCCTTCCTTGATATTCACTCCACCTTAGCTCTCTTCCTTCGTTTATTTGCTCTTTATCCCATTTCCACCTTCCCACATTGCC-TTTTCTCCTCCCGCATCCTTATGTTAAGGAATAGTCTT-GGGGCAGCACATGAGACGGAAGGAGCTCTACAGAGCCCCGAA----TTCCGTGGCTGGATCAG-------CATCCTCGCAGCCCACACTGCTGTGCA-GCAGTGCACCTGAGAAAGTTTGAGTT--GAggccgggcacagtagc--tcacgcctgtaatcccagc s panTro4.chr19 58979759 295 + 63644993 GAGTTGTAATCGGAG-TTCCTTTATCTTCCTTCCTTGATATTCACTCCACCTTAGCTCTCTTCCTTCATTTATTTGCTCTTTATCCCATTTCCACCTTCCCACATTGCC-TTTTCTCCTCCCGCATCCTTATGTTAAGGAATAGTCTT-GGGGCAGTACATGAGACGGAAGGAGTTCTACAGAGCCCCGAA----TTCCGTGGCTGGATCAG-------CATCCTCGCAGCACACACTGCTGTGCA-GCAGTGCACCTGAGAAAGTTTGAGTT--GAggccgggcacagtagc--tcacacctgtaatcccagc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59901633 297 + 64156825 GAGTTGTAGTGGGAG-TTCCTTTATCTTCCTTCCTTGACATTCACTCCACCTTAGCTCTCTTCCTTCGTTTATTTGCTCTTTATCCCATTTCCACCTTCCCACATTGCC-TTTTCTCCTTCCCCATCCTTATATTAAGGAATAGTCTTGGGGGCAGCACATGAGACAGAAGGAGCTCCACAGAGCCCCGAA----TTCCGTGGCTGGATCAG-------CATCCTTGCAGCACACACTGCTGTGCAGGCAGAGCACTTGAGAAAGTTTGAGTT--GAggccgggcacagtggc--tcacacctgtaatcccagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919101 297 + 59248254 GAGTTGTAGTGGGAG-TTCCTTTATCTTCCTTCCTTGACATTCACTCCACCTTAGCTCTCTTCCTTCGTTTATTTGCTCTTTATCCCATTTCCACCTTCCCACATTGCC-TTTTCTCCTTCCCCATCCTTATATTAAGGAATAGTCTTGGGGGCAGCACATGAGACAGAAGGAGCTCCACAGAGCCCCGAA----TTCCGTGGCTGGATCAG-------CATCCTTGCAGCACACACTGCTGTGCAGGCAGAGCACTTGAGAAAGTTTGAGTT--GAggccgggcacagtggc--tcacacctgtaatcccagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47037685 297 + 51301725 GAGTTGTAGTGGGAG-TTCCTTTATCTTCCTTCCTTGACATTCACTCCACCTTAGCTCTCTTCCTTCGTTTATTTGCTCTTTATCCCATTTCCACCTTCCCACattgcc-ttttctccttccccatcCTTATATTAAGGAATAGTCTTGGGGGCAGCACATGAGACAGAAGGAGCTCCACAGAGCCCCGAA----TTCCGTGGCTGGATCAG-------CATCCTTGCAGCACACACTGCTGTGCAGGCAGAGCACTTGAGAAAGTTTgagtt--gaggccaggcacagtggc--tcacacctgtaatcccagc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46750836 297 + 50890351 GAGTTGTAGTGGGAG-TTCCTTTATCTTCCTTCCTTGACATTCACTCCACCTTAGCTCTCTTCCTTCGTTTATTTGCTCTTTATCCCATTTCCACCTTCCCACATTGCC-TTTTCTCCTTCCCCATCCTTATATTAAGGAATAGTCTTAGGGGCATCACGTGAGACGGAAGGAGCTCCACAGAGCCCTGAA----TTCCGTGGCTGGATCAG-------CATCCTTGCAGCACACACTGCTGTGCAGGCAGAGCACTTGAGAAAGTTTGAGTT--GAggccgggcacagtggc--tcacacctgtaatgccagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45328254 289 + 49145316 ---------TGGGAG-TTCCTGTATCTTCCTTCCTTGATATTCTCTCCACCTTAGCTGTCTTCCTTCATTTATTTGCTCTTTGTCCTATTCGCACCTTCCCACACTCCCTTTTTTTCCTTCCCCATCCTTATATCAATGAATAGTCTCAGGAGCAGCACATGAGAGGGAAAGAGCTCCACAGGGCCCCGAA----TTCCGTGGCTGGGTCAG-------CATCCTCACAGCACACACTGCTGTGCAGGCAGAGCACTTGAGAAAGTTTGAGGT--GAggccgggcacagtggc--ccgcgcccgtaaccccagc i calJac3.chr22 C 0 C 0 s canFam3.chr1 103183131 308 + 122678785 GAGTTGTAGTGGGGTCTTCCTTTGCCTTCTTCCCTCTGTGTTCTCTCTGCTTTATCTCTCTTCTTGTGTTTCTTTGCTCTTCATCTCATTTCCACCCTCCCACACTGCC-ATTTCCCCTTCTCCCTCCTTGTGGTAGGAATCAGGCTTAGGAGGAACCCCTACAACCCAAGTTGCTGCACAGAGCGCTGAAGTACCTCAGTGGCTGCGTCTGCTCCCCTCCTCCTGCCAAGACTTACTGCCG-----CCAGGGAGCTCAAGAAGACTCAAGCTTAGAGGCTGAGCATCAGGACCACCATGCATTTCATTTCAGC i canFam3.chr1 T 1206 I 1686 e ponAbe2.chr19 55850775 5965 + 60714840 I e nomLeu3.chr10 102612733 1602 - 106955855 M a score=358693.000000 s hg38.chr19_GL949747v2_alt 45937 210 + 729520 actgtgggaggctaaggtaggaggattgcttgaggccaggagtttgagagcagcctgggcaacatggcgaaaccccatgtctactaaaaatacaa------------aaaaattagccgggtgtggtggcgggtgcctgtaatcccagctactcaggaggctgaggcaggagaattacttgacctgggcctggggttg-gggggtggaggctgcagtgagctc s panTro4.chr19 58980054 210 + 63644993 actgtgggaggctaaggtgggagaattgcttgaggccaggagttcgagagcagcctgggcaacatggcgaaaccccatgtctactaaaaatacaa------------aaaaattagccgggtgtggtggcgggtgcctgtaatcccagctactcaggaggctgaggcaggagaattacttgacctgggcctggggttg-gggggtggaggctgcagtgagctc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59901930 210 + 64156825 actgtgggaggctgaagtgggaggattgcttgaggccaggagttcgagagcagcccgggtaacatagcaaaaccccatgtctactaaaaatacaa------------aatacggagccaggtgtggtggcgggtgcctgtaatcccagctactccggaggctgaggcaggagaatcacttgacccgggcctggggttg-ggagttggaggctgcagtgagccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919398 210 + 59248254 actgtgggaggctgaagtgggaggattgcttgaggccaggagttcgagagcagcctgggtaacatagcaaaaccccatgtctactaaaaatacaa------------aatacgtagccaggtgtggtggcgggtgcctgtaatcccagctactccggaggctgaggcaggagaatcacttgacccgggcctggggttg-ggagttggaggctgcagtgagccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47037982 210 + 51301725 actgtgggaggctgaagtgggaggattgcttgaggccaggagttcaagagcagcctgggcaacatagcaaaaccccatgtctactaaaaatacaa------------aaaaagtagccgggtgtggtggcgggtgcctataatcccagctactccggaggctgaggcaggagaatcgcttgacctgggcctggggttg-gggggtggaggctgcagtgagccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46751133 210 + 50890351 actgtgggaggctgaagtgggaggattgcttgaggccaggagttcgagagcagcctgggcaacatagcaaaagcccatgtctactaaaaatacaa------------aaaaagtagccgggtgtggtggcgggtgcctgtaatcccagctactctggaggctgaggcaggagaatcgcttgacccgggcctggggttg-gggggtggaggctgcagtgagccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45328543 223 + 49145316 actgtgagaggccgaggcgggaggattgcttgaggctgggagctcgagaccagcctgggcaacatggtgaaaacccatctctactaaaagtacaaaaaaaaaaaaacaaaaattaactgggagtagtggagggtgcgtgtaatcccagctacttgggaggctgagacaggagaatcgcttgacccaggcctggggggatgggggcaggggctgcagtgagccc i calJac3.chr22 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55850775 5965 + 60714840 I e nomLeu3.chr10 102612733 1602 - 106955855 M a score=136595.000000 s hg38.chr19_GL949747v2_alt 46147 119 + 729520 agattgtgccactacactccagcttgggcgacagagtgagactccatctcaaagaaaacaaacaaacaaacaaaaccctagcctccagattttcagggaggctgatttgagtaataata s panTro4.chr19 58980264 119 + 63644993 agattgtgccactacactccagcttgggcgacagagtgagactccatctcaaataaaacaaacaaacaaacaaaaccctagcctccagattttcagggaggctgatttgagtaataata i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59902140 112 + 64156825 agattgtgccactacactccagctcatgtgatagaatgagactccatctcaaagaa-------aaacaaacaaaaCCCTAGCCTGCAGattttcagggaggctgatttgagtaataata i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919608 112 + 59248254 agattgtgccactacactccagctcaggtgatagaatgagactccatctcaaagaa-------aaacaaacaaaaccctagcctgcagattttcagggaggctgatttgagtaataata i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47038192 116 + 51301725 agattgtgccactacactccagctcaggtgatagagtgagactccatctcaaagaa---aaacaaacaaacaaaaccctagcCTGCAGATTttcagggaggctgatttgagtaataata i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45328766 112 + 49145316 ggatcgtgccactgcactccagcttgggcatcacagtgagactccatctcaaagaa-------aagcaaacaaaaccctaacctccagattttcagggaggctggttggagtaataatg i calJac3.chr22 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55850775 5965 + 60714840 I e nomLeu3.chr10 102612733 1602 - 106955855 M e chlSab2.chr6 46751343 0 + 50890351 C a score=20907.000000 s hg38.chr19_GL949747v2_alt 46266 24 + 729520 aaactctgattggccaggtgcagt s panTro4.chr19 58980383 24 + 63644993 aaactctgattggccaggtgcagt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59902252 24 + 64156825 aaactctgatgggccaggtgcggt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919720 24 + 59248254 aaactctgattggccaggtgcggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47038308 24 + 51301725 aaactctgattggccaggcgcggt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55850775 5965 + 60714840 I e calJac3.chr22 45328878 0 + 49145316 C e nomLeu3.chr10 102612733 1602 - 106955855 M e chlSab2.chr6 46751343 0 + 50890351 C a score=30516.000000 s hg38.chr19_GL949747v2_alt 46290 23 + 729520 ggctcatgcctgtaatcccagca s panTro4.chr19 58980407 23 + 63644993 ggctcatgcctgtaatcccagca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102614335 23 - 106955855 ggctcacgcctgtaatcccagca i nomLeu3.chr10 M 1602 C 0 s rheMac3.chr19 59902276 23 + 64156825 ggctcacacctgtaatcccagca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919744 23 + 59248254 ggctcacacctgtaatcccagca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47038332 23 + 51301725 ggctcacgcctgtaatctcagca i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55850775 5965 + 60714840 I e calJac3.chr22 45328878 0 + 49145316 C e chlSab2.chr6 46751343 0 + 50890351 C a score=322364.000000 s hg38.chr19_GL949747v2_alt 46313 192 + 729520 ctttgggaggcccaagcgggcagatcacgaggtcaggagttcgagaccagcctggccaatatggtaaaaccccatctctactaaaaatac-----aaaaattagccaggcagggtggc--acacatatagtcccagctactcgggaggctgaggcagaagaatcgtttgaacctgggaggcagaggtttcattgagccg s panTro4.chr19 58980430 192 + 63644993 ctttgggaggcccaagcaggcagatcacgaggtcaggagttcgagaccagcctggccaatatggtaaaaccccatctctactaaaaatac-----aaaaattagccaggcagggtggc--acgcacgtagtcccagctactcgggaggctgaggcagaagaatcgtttgaacctgggaggcagaggtttcattgagccg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55856740 192 + 60714840 ctttgggaggccgaggtgggcagatcacaaggtcaggagtttgagaccagcctggccaatatggtaaaaccccatctctactgaaaatac-----aaaaattagccaggcatggtggc--acgcacgtagtcccagctactcaggaggctgaggcagaagaatcgcttgaacctgggaggcagaggtttcagtgagcca i ponAbe2.chr19 I 5965 C 0 s nomLeu3.chr10 102614358 199 - 106955855 ctttgggaggccgaggcgggcggatcacaaggtcaggagatcaagaccatcctggctaacacagtgaaaccccgtctctactaaaaatacaaaaaaaaaattagcctggcgtggtggcgggtgcctgtagtctcagctactcaggaggctgaggcaggagaattgcttgaacccaggaggcagaggttgccatgagctg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59902299 192 + 64156825 ctttgggaggccgaggagggcagatcacgaggtcaggagtcggagaccagcctggccaatatgggaaaaccccagctctactaaaaacat-----aaaaattagctgggcatggtggc--gcgcatgtagtcccagctactcgggaggctgaggcagaagaatcgcttgaacctgggaggcagaggtgtcagtgagccg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919767 192 + 59248254 ctttgggaggctgaggagggcagatcacgaggtcaggagtcggagaccagcctggccaatatggtaaaaccccatctctactaaaaacat-----aaaaattagctgggcatggtggc--gcgcatgtagtcccagctactcgggaggctgaggcagaagaatcgcttgaacctgggaggcagaggtttcagtgagccg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47038355 192 + 51301725 ctttgggaggccgaggcgggcagatcacgaggtcaggagtcggagaccagtctggccaatatggtaaaaccccatctctactaaaaacat-----aaaaattagctgggcatggtggc--gcgcatgtagtcccagctactcgggaggctgaggcagaagaatcgcttgaacccgggaggcagtggtttcagtgagccg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e calJac3.chr22 45328878 0 + 49145316 C e chlSab2.chr6 46751343 0 + 50890351 C a score=144535.000000 s hg38.chr19_GL949747v2_alt 46505 70 + 729520 agatcgcgccactgcactccagcctgggcgacagagcaagactccgtctc----aaacaaaca-aacaaacaaa--a s panTro4.chr19 58980622 70 + 63644993 agatcgcgccactgcactccagcctgggcgacagagcaagactccgtctc----aaacaaaca-aacaaacaaa--a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55856932 72 + 60714840 agatcacgccactgtactccagcctgggcgacagagcaagactccgtctc----aaacaaaca-aacaaacaaaATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102614557 71 - 106955855 agatcataccactgcactccagcctgggcgacagagcgagactctgtctt----aaaaaaaaacaaaaaacaaa--a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59902491 76 + 64156825 agatcacgccactgcactccagcctgggcgacagagtgagactccatctcaaaaaaaaaaaaa-aaaaaacaaaaca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919959 73 + 59248254 agatcacgccactgcactccagcctgggcgacagagtgagactccatctc---aaaaaaaaaa-aaaaaacaaaaca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47038547 69 + 51301725 agatcacgccactgcactccagcctgggcgacagagtaagactccatctc-------aaaaaa-aagaaacaaaaca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46751343 72 + 50890351 agatcacgccactgcactccagcctgggcgacagagtaagacttcatctc----aaaaaaaaa-aaaaaacaaaaca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e calJac3.chr22 45328878 0 + 49145316 C a score=3038111.000000 s hg38.chr19_GL949747v2_alt 46575 1085 + 729520 aaactctggtctcccacttacctggctcaatgtgtattaaactcttttttgcaattcctctgtcttgatgaatgggcttcatccaggcacccggcaagaGCTGTAATGTAACTCATTACAGCAGTTACAATAG-ATGAAAAATAATTTACAGAGCTGAGGAAGCAGAGTGCTAGCACCCAGTAA-----------GGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCAA---TAAAAGACATGGGTAGACTTCGCATCCACGGCATAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGGATGAGATAAtttttttttttaatttgaaactgggtctcactatgttg-cccaggctggtctcaaa-ctcctgggctcaagcaattctccagcctcagcctcccaaagtgctgggattacaggcctgagccaccgcacatgactgAGAAAGAATTATTGAGAGTGAAATCACTAACACCAA------------GAAAAACCAAAACACgccatgcacagtggttcacacctgcaatcccagccctttgggaggccgaggtgagtggatcacctgaggccaggggttcaagaccagcctggtcaacatggtcagaaccccatctctact-aaaaatacaaaaattagccaggcgtggtggtgggcacatgtaatcccagctactcaagtggctgaggcaggagaattgcttaaactcgggaggcagaggttgcagtgagctgagatcgcaccactgcactccaccctgggcaacagagcgagactctgtctcaaaaacaaaatgaaacaaaacaaaacaaaaaaCCAAAACGCTAAGAGATGCAAAGACTGGTAGAAGGAATCTGGTGCTGGTAGATTCATAATTTTCAAAAACAGCCTAGAAATTTTCCAAGGATGTAGTATAACAAAAAGGCAAAGGAGggccgggcacggtggctcacacctgtaatcccagcactttgggaggccgaggcaggcagatcacctgaggtcaggagttcaagaccag-cctggtcaacacggtgaaaccttcatcgctact-aaaaatag-aaaaattagccggatg-ggtggtgcaggcctgtaatcct s panTro4.chr19 58980692 1083 + 63644993 aaactctggtctcccgcttacctggctcaatgtgtattaaactcttttttgcaattcctctgtcttgatgaatgggcttcatccaggcacccggcaagAGCTGTAATGTAACTCATTACAGCAGTTACAACAG-ATGAAAAATAATTTACAGAGCTGAGGAAGCAGAGTGCTAGCACCCAGTAA-----------GGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCAA---TAAAAGACACGGGTAGACATCGCATCCACGGCATAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGGATGAGATAAttttttttt--aatttgaaactgggtctcactatgttg-cccaggctggtctcaaa-ctcctgggctcaagcaattctccagcctcagcctcccaaagtgctgggattacaggcctgagccaccgcacATAACTGAGAAAGAATTATTGAGAGTGAAATCACTAACACCAA------------GAAAAACCAAAACACGTCATgcacagtggttcacacctgcaatcccagcactttgggaggccgaggtgagcggatcacctgaggccaggggttcaagaccagcctggtcaacatggtcagaaccccatctctact-aaaaatacaaaaattagccaggcgtggtggcgggcacctgtaatcccagctactcaagtggctgaggcaggagaattgcttaaactcgggaggcagaggttgcagtgagctgagatcgcaccactgcactccaccctgggcaacagagcgagactctgtctcaaaaacaaaatgaaacaaaacaaaacaaaaaaCCAAAACGCTAAGAGATGCAAAGAATGGTAGAAGGAATCTGGTGCTGGTGGATTCATAATTTTCAAAAACAGCCTAGAAATTTTCCAAGAATGTAGTACAACAAAAAGGCAAAGGAGggccgggcacggtggctcacacctgtaatcccagcacttcgggaggcctaggcaggcagatcacctgaggtcaggagttcaagaccag-cctggtcaacatggtgaaaccttcatcgctact-aaaaatag-aaaaataagccggatg-ggtggtgcaggcctgtaatcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55857004 1066 + 60714840 AAActctggtct---gcttacctggctcaatgtgtattaaactcttttttgcaattcctctgtcttgatgaatgggcttcatccgggcacccagcaaga--------ggaactcattacagcagttacaACAG-ATGAAAAATAATTTACAGAGCTGAGGAAGCAGAGTGCTAGCACCCAGTAA-----------GGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCAGTGCTAAAAGACATGGGTAGACATCG-ATCCATGGCACAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGGATGAGAttattttttttt-taatttgaaactgggtctcactatgttg-cccaggctggtttcaaa-ctcctgggctcaagcaattctccagcctcagcctcccgaagtgctgggattacaggcctgagtcaccgcgcATGACTGAGAAAGA---ATTGAGAGTGAAATCACTAACACCAA------------GAAAAACCAAAACATgccaggcacagtggttcacacctgcaatcccagcactttgggaggccgaggtcagtggatcacatgaggccaggggttcgagaccagcctggtcaacatggtgagaaccccgtctctact-aaaaatacaaacattagccacgcgtggtggcaggcacctgtaatcccagctactcaggtggctgaggcaggagaattgcttaaactcgggaggcagaggttgcagtgagctgagattgcaccactgcactccagcctgggcgacagagcgagactccgtctcaaaaacaaaatgaaacaaaacaaaa--------caaaaTGCTAAGCAATGCAAAGAATGGTGGAAGGAATCTGGTGCTGCTGGATTCATAATTTTCAAAAACAGCCTAGAAATTATCCAAGGATGTAGTACAAC-AAAAGGCAAAGGAGggccaggtgtggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacctgaggtcaggagttcaagaccagcccttgtcaacatggcaaaaccttcatcactactaaaaaatagaaaaaattaaccggatg-ggtggtgcaggcctgttatcct i ponAbe2.chr19 C 0 T 6164 s nomLeu3.chr10 102614628 1069 - 106955855 aaactctggtctcccgcttacctggctcaatgtgtattaaactcctttctgcaattc--ctgtcttgatgaatgggcttcatccgggcagcaggcaaga--------ggaactcattACAGCAGTTTCAACAG-ATGCAAAATAATTTACAGAGCTGAGGAAGCAGAGTGCTAGCACCCAGTAA-----------GGCAGGAAACAAGATACTTTC---AGAATTCTAGCAGTCAGTGCTAAAAGACATGGGTAGACACCGAATCCATGGCACAGAAGCAGGAGGCTGTGCCAACACCATGTTCTGAGGATGAGATAAttctttttt--aatttgaaactgggtctcactatgttgccccaggctggtctcaaagctcctgggctcaagcaattctccatcctcagcctcccaaagtgctgggattacaggcctgagccactgcacATGACTGAGAAAGAATTATTGAGAGTGAAATCACTAACACCAA------------GAAAAACCAAAACACgccaggcacggtggttcacacctgcaatcccagcactttgggaagccaaggtgagcgcatcacctgaggccaggggttcgagaccagcctggtcaacatggtgacaaccccgtctctact-aaaaatacaaaaattagccaggcgtggtggcgggcacctgtactcccagcttctcaggtggctgaggcagaagaattgcttaaacttgggaggcagag------gtgagctgagatcgtaccactgcactccagcctgggcgacagagcaagagtccgtctcaaaaacaaaacgaaacaaaacaaaataaaaaaCAAAAACGCTAAGAGATGCAAAGAATGGTAGAAGGAATCTGGTGCTGGTGGATTCATAATTTTCAAAAACAGCCTAGAAATTATCCAAGGATGTAGTACAACAAAAAGGCAAAGGAGggccgggcgcagtggctcacgcctgtaatcccagcactttgggacgccgaggcgggcagatcacctgaggtcaggagttcaagaccag-cctggtcaacatggcgaaaacttcatcgctact-aaaaatag-aaaaattagccggatg-ggtggtgctggcctgtaatcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59902567 1077 + 64156825 aaactctggtctcccgcttaccggactcaatgtgtgttgaactccttcttgcaattcctctgtcctgatgaatgggcttcatccaggcagccagcaaga--------ggaactcgttacaacagttacaATAG-ATGAAAAATAATTT--AGAGTTGAGGAAGCAGAGTGCTAGCACCCAGTAAGGCAGAACTCTGGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCGGTGTTAAAAGACATGGGTAGACCTCGCATCCATGGCACAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGGATGAGAAAAttttttt----aatttgaaactgggtctcactatgttg-ccaaggctggtctcaaa-ctcctgggctcaagcaatcctccagcctcagccttccaaagtgctgggattacaggcctgagccaccacgcATGACTGAGAAAGAATTACTGAGAGTGAAATCATTAACACGAAGGAAAAAAAAAGAAAAAAGAAAAACACgccaggcacagtggttcacacctgcaatcccagcactttgggaggccaaggtgagcgaatcacctgaggccaggggttcgagaccagcctgggcaacgtggtgagaaccacatctctact-aaaaatacaaaaattagctgggcatg-------------gtaatcccagctactcaggaggctgaggcaggagaattgcttaaactcgggaggcagaggttgcagtgagctgagatcgcaccgctgcactccagcctgggcaacagagcgagactctgtctcaaaaacaaaatgaaacaaagcaaaa-----aaCCAAAACGCTAAGAGATGCAAAGAATGGTAGAAGGAATCTGGTGCTGGTGGATTCATAATTTTCAAAAACAGCCTAGAAATTATCCAAGGATGTAGTACAACAAAAAGGCAAAGGAGggccgggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtagatca--tgatgtcaggagttcaagaccag-cctggtcaacatggcaaaacattcatctctact-aaaaatag-aaaaataagccagatg-ggtcgtgcaggcctgtaatcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54920032 1077 + 59248254 aaactctggtctcccgcttaccggactcaatgtgtgttgaactccttcttgcaattcctctgtcctgatgaatgggcttcatccaggcagccagcaaga--------ggaactcgttacaacagttacaATAG-ATGAAAAATAATTT--AGAGTTGAGGAAGCAGAGTGCTAGCACCCAGTAAGGCAGAACTCTGGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCGGTGTTAAAAGACATGGGTAGACCTCGCATCCATGGCACAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGGATGAGATAAttttttt----aatttgaaactgggtctcactatgttg-ccaaggctggtctcaaa-ctcctgggctcaagcaatcctccagcctcagccttccaaagtgctgggattacaggcctgagccaccacacATGACTGAGAAAGAATTACTGAGAGTGAAATCATTAACACCaagaaaaaaaaaagaaaaaagaaaaaCACgccaggcacagtggttcacacctgcaatcccagcactttgggaggccaaggtgagcgaatcacctgaggccaggggttcgagaccagcctggtcaacgtggtgagaaccccatctctact-aaaaatacaaaaattagctgggcatg-------------gtaatcccagctactcaggaggctgaggcaggagaattgcttaaactcgggaggcagaggttgcagtgagctgagatcgcaccactgcactccagcctgggcaacagagcgagactctgtctcaaaaacaaaatgaaacaaagcaaaa-----aaCCAAAACGCTAAGAGATGCAAAGAATGGTAGAAGGAATCTGGTGCTGGTGGATTCATAATTTTCAAAAACAGCCTAGAAATTATCCAAGGATGTAGTACAACAAAAAGGCAAAGGAGggccgggcacggtggctcacgcctgtaatcccagcactttgtgaggccgaggtgggtagatca--tgatgtcaggagttcaagaccag-cctggtcaacatggcaaaacattcatctctact-aaaaatag-aaaaataagccagatg-ggtcgtgcaggcctgtaatcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47038616 1075 + 51301725 acactcTGGTCTCCCGCTTACCTGACTCAATGTGTGTTGAACTCCTTCTTGCAATTCCTCTGTCCTGATGAATGGGCTTCATCCAGGCAGCCAGCAAGA--------GGAACTCGTTACAACAGTTACaacag-atgaaaaataatttacagagTTGAGGAAGTGGAGTGCTAGCACCCAGTAAGGCAGAACTCTGGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCAGTGTTAAAAGACATGGGTAGACCTCACATCCATGGCACAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGgatgagataatttttta----aatttgaaactgggtctcactatgttg-cccgggatggtctcaaa-ctcctgggctcaagcaatcctccagcctcagccttccacagtgctgggattacaggcctgagccaccacgcatgACTGAGAAAGAATTATTGAGAGTGAAATCATTAacaccaaggaaaaa-----aaaaaacaaaaacacgccaggcacagtggttcacacctgcaatcccagcactttgggaggccaaggtgagcgaatcacctgaggccaggggttcgagaccagcctggtcaacgtggtgagaaccccatctctactaaaaaatacaaaaattagccgggcatg-------------gtaatcccagctactcaggaggctgaggcaggagaattgcttaacctcgggaggcagaggttgcagtgagctgagatcgcaccactgcactccagcctgggcaacagagcgagactctgtctcaaaaacaaaatgaaacaaagcaaaa-----aaccaaaacgCTAAGAGATGCAAAGAATGGTAGAAGGAACCTGGTGCTGGTGGattcataattttcaaaaacagcCTAGAAATTATCCAAGGATGTAGTACAACAAAAAGGCAAaggagggccgggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtagatca--tgatgtcaggagttcaagaccag-cctggtcaacatggcaaaacattcatctctact-aaaaatag-aaaaataatccagatg-ggtggtgcaggcctgtaatcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46751415 1072 + 50890351 aaactctggtctcccgcttaccggactcaatgtgtgttgaactccttcttgcaattcctctgtcctgatgaatggacttcatccaggcagccagcaaga--------ggaactcgttacaacagttacaACAG-ATGAAAAATAATTTACAGAGTTGAGGAAGCAGAGTGCTAGCACCCAGTAAGGCAGAACTCTGGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCAGTGTTAAAAGACATGGGTAGACCTCACATCCATAGCACAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGGATGAGATAAttttttt----aatttgaaactgggtctcactatgttg-cccaggctggtctcaaa-ctcctgggctcaagcaatcctccagcctcagccttccaaagtgctgagattacaggcctgagccaccacgcATGTCTGAGAAAGAATTACTGAGAGTGAAATCATTAACACCaagaaaa-------aaaaaaaaaaaaCACgccaggcacagtggttcacacctgcaatcccagcactttgggaggccaaggtgagcggatcacctgaggccaggggttcgagaccagcctggtcaacgtgatgagaaccctatctctact-aaaaatacaaaaattagccgggcatg-------------gtaatcccagctactcaggaggctgaggcaggagaattgcttaaactcgggaggtagaggttgcagtgagctgaggtcgcaccactgcactccagcctgggcaacagagtgagattctgtctcaaaaacaaaatgaaacaaagcaaaa-----aaCCAAAACGCTAAGAGATGCAAAGAATGGTAGAAGGAATCTGGTGCTGGTAGATTCATAATTTTCAAAAACAGCCTAGAAATTATCCAAGGATGTAGTACAACAAAAAGGCAAAGGAGggccaggcatggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtagatca--tgatatcaggagttcaagacaag-cctagtcaacatggcaaaacattcatctctact-aaaaatag-aaaaataagccagatg-ggtggtgcaggcctgtaatcct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45328878 1071 + 49145316 aaactctggtctcccacctacctggctcagtgtgtattaaactctttcttgcaatttctttgtcttgatgaatgggcttcatctgggcagccaccaaga--------ggaacccgttatgacagttacaTCAGCATGAAAAATAATTTATAGAGCTGAGGAAGCAGAGTGCTAGCATCCAGTAAGGCAGAACTCTTGCAGGAAACAAGATACTGTCGGAAGAATTATAGCAGTCAGTGCTGAAAGATGTGAGTAGACATCACATCCGTGGCACAGAAGCAGGAGGCTGTGCAAACGCCATGTTCTGAGGATGAGAGAAttgtttttta-aatttgaaactgggtctcactgtgttg-cccaggctggtctcaaa-ctcctgggctcaagcgatcctccagcctcagcctcccaaactgctgggattacaggcctgagccaccgtgcctgacTGGGAAAGAATTATTGAGAGTGAAATCACTAACTCCAA------------GAAAAAACAAAACCCAccaggttcggcggttcacatgtacaatgccagcactttgggaggctgaggtgggcagatcacttgaggccaggggttcgagatcagcctggtcaacatggtgagaaccccgtctctact-aaaaatacaaaaattagccaggcgtg---gtgggcgcctgtagtcccagctaatcaggtggctgcggcagg-gaatccctcgaactcaggaggcagaggttgcagtgagccgagattgcaccactgcattccagccagggtgacagagagagactccatctcacaaa-------aaacaaaGCTAAT-----AACCAAAACGCTAAGAGATGCAAAGACTGGTAGAAGGAATCTGGTGCTGGTGGATTCATAATTTTTAAGAACAGCCTAGAAATTATCCAAGTATCTAGTACAACAAAAAGGTAAAGGAGggcaggacgcagtggctcacgcctgtaaccccagcacttt--gaggccaaggcaggttgatca--taagatcaggagttcgaaaccag-cctgaccaacatggtgaaac-tccatctctact-aaaattac-aaaaattagccaggtgtggtggcgtgtgcctgtagtccc i calJac3.chr22 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I a score=260751.000000 s hg38.chr19_GL949747v2_alt 47660 125 + 729520 agctacttgggaggctgaggcaggagaatcacttgaacctggaaggtggaggttgcagtgagcgaagatcgcgccattgcactccatcct-ggcaacagagtgagactccatttcaaaaaaaaaaa s panTro4.chr19 58981775 125 + 63644993 agctacttgggaggctgaggcaggagaatcacttgaacctggaaggtggaggttgcagtgagccaagatcgcaccattgcactccatcct-ggcaacagagtgagactccatttcaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102615697 125 - 106955855 agctactcgggaagctgaggcaggagaatcacttgaacctggaaggtggaggttgcagtgagccaagatcgcaccattgcactccatcct-ggcaacacagtgagactccatttcaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59903644 124 + 64156825 agctactcgggaggttgaggtaagagaatcacttgaaccagg-aggtggaggtggcagtgagtcgagatcgcaccattgcactccatcct-ggcaacagagtgagacgccatttcaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54921109 124 + 59248254 agctactcgggaggttgaggtaagagaatcacttgaaccagg-aggtggaggtggcagtgagtcgagatcgcaccattgcactccatcct-ggcaacagagtgagacgccatttcaaaaaaaaaaa i macFas5.chr19 C 0 I 905 s papAnu2.chr19 47039691 124 + 51301725 agctactcgggaggttgaggtaggagaatcacttgaaccagg-aggtggaggtggcagtgagtcgagaccgcaccattgcactccatcct-ggcaacagagtgagacgccatttcaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46752487 113 + 50890351 agctactcgggaggttgaggtaggagaatcacttgaaccagg-aggtggaggtggcagtaagccaagattgtgccactgcactccatcct-ggcaacagagtgagacgccatt-----------aa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45329949 126 + 49145316 agctacttgggaggctgaggcaggagaatcacctgaatccaggaggcagaggttgcagtgagccaagatcttgccattgcactccagcctgggtgacagagtgagactctgtctaaaaaaaaaaTT i calJac3.chr22 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55858070 6164 + 60714840 T a score=19653.000000 s hg38.chr19_GL949747v2_alt 47785 54 + 729520 aaaaa-aaaaaaGGCAAAGGAGTGGAAATTGT------GAAAGGGAGgtttttttgttgtt s panTro4.chr19 58981900 48 + 63644993 aaaTA-------GGCAAAGGAGTGGAAATTGT------GAAAGGGAGGTTtttttgttgtt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102615822 56 - 106955855 aaaaaaaaaaaaGGCAAAGGAGTGGAAATTGTTAAGGGGAAAGGGAAGCttttt-----tt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59903768 34 + 64156825 --------aaaaGGCAAAGGAGTAGAAACTTT------AAAAGGGGAA------------- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47039815 36 + 51301725 --------aaaaggcaaagcagtAGAAATTGT------AAAagggaag-----------tt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46752600 45 + 50890351 aaaaa-aaaaaaGGCAAAGGAGTAGAAATTGT------AAAAGGGAAC---------AGtt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45330075 39 + 49145316 ----------AATTTAAATAAGACAAAATTTC------------TAATTTTTTTTGTTGTT i calJac3.chr22 C 0 T 9303 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55858070 6164 + 60714840 T e macFas5.chr19 54921233 905 + 59248254 I a score=10060.000000 s hg38.chr19_GL949747v2_alt 47839 32 + 729520 ttgttgtttttgtttttgttttttgtttttt--g s panTro4.chr19 58981948 32 + 63644993 tttttgtttttgtttttgttttttgtttttt--g i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102615878 32 - 106955855 tgttagtttttgtttgtttgtttgtttgttt--g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59903802 17 + 64156825 ----------------tttgttttgtttttttt- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47039851 24 + 51301725 tttttgttt-------tttgttttgtttttt--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46752645 30 + 50890351 tttttgttttt-tttgttttttttgtttttt--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55858070 6164 + 60714840 T e calJac3.chr22 45330114 9303 + 49145316 T e macFas5.chr19 54921233 905 + 59248254 I a score=265915.000000 s hg38.chr19_GL949747v2_alt 47871 151 + 729520 tttttgagacagagtctcactctattgcccaggctggagtgcagtggcaagatcttggctcactgcaacctccgcctcccatgttcaagcaa-ttctcctgcctcagcctcccaagtagctgggtctacaggtgcatgccatcatacctggc s panTro4.chr19 58981980 151 + 63644993 tttttgagacagagtctcactctattgcccaggctggagtgcagtggcaagatcttggctcactgcaacctccgcctcccatgttcaagcaa-ttctcctgcctcagcctcacaagtagctgggtctacaggtgcatgccatcatacctggc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102615910 151 - 106955855 tttttcagacggagtctcactctatcgcccaggctggagtgcagtggcaagatcttggctcactgcaacttccgcctcccatgttcaagcaa-ttctcctgcctcagcctcccaagtagctgggtctacaggtgcatgccaccatatctggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59903819 149 + 64156825 --tttgagacagagcgtcactttatcacccaggttggagtgcagtggcacgatcttggctcactgcaacctccgcctcccatgttcaagcaa-ttctcctgcctcagcctcccaaggagctgggcctacaggttcatcccgccatacctggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54922138 151 + 59248254 tttttgagacagagcgtcactctatcacccaggttggagtgcagtggcacgatcttggctcactgcaacctccgcctcccatgttcaagcaa-ttctcctgcctcagcctcccaaggagctgggcctacaggttcatcccgccatacctggc i macFas5.chr19 I 905 C 0 s papAnu2.chr19 47039875 150 + 51301725 -tttggagacagagcgtcactctatcacccaggttggagtgcaatggcgcgatcttggctcactgcaaccttcgcctcccatgttcaagcaa-ttctcctgcctcagcctcccaaggagctgggcctacaggttcatcccgccatacctggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46752675 151 + 50890351 -ttttgagacagagcgtcactctatcacccaggttggagtgcagtggcgcgatcttggctcactgcaacctccgcctcccatgttcaagcaatttctcctgcctcagcctcccaaggagctgggcctacaggttcatcccgccatacctggc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55858070 6164 + 60714840 T e calJac3.chr22 45330114 9303 + 49145316 T a score=379650.000000 s hg38.chr19_GL949747v2_alt 48022 164 + 729520 taattttttatttttagtagagacggggtttcactatgttggccaggctggtctcaaatccttgacctcagatgatccatccacctcggcctcccaaagtgctgggatgacaggcatgagccaccacgccaggccAGAAAGGGAAGA-TTTTGTTAAGAGCGATG s panTro4.chr19 58982131 164 + 63644993 taattttttatttttagtagagatggggtttcactatgttggccaggctggtctcaaatccttgacctcagatgatccatccacctcggcctcccaaagtgctgggatgacaggcatgagccaccacgccaggccAGAAAGGGAAGA-TTTTGTTAAGAGCGATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55851906 164 + 60714840 taattttttatttttagtagagacggagtttcaccatggtggccaggctggtctcgaatccttgacctcagatgatctgcccacctcggcctcccaaagtgctgggatgacaggcatgagccactgcgcctggccGGAAAGGGAAGA-TTTTTTTAAGAGCGATG i ponAbe2.chr19 T 6164 C 0 s nomLeu3.chr10 102616061 164 - 106955855 taattttttatttttggtagagacggggtttcaccatgttggccaggctagtctcgaatccttgacctcagatgatccgcccacctcggcctcccaaagtgctgggatgacaggcatgagccactgtgcccggccAGAAAGGGAAGA-TTTTTTTATGAGCGATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59903968 164 + 64156825 tgattttttatttttagtagagacggggtttcaccatgttggccaggctggtctcgaattcttgacctcaggtgatccgcctgcctcggcctcccaaagcaccgggattacaggcgtgagccaccgcgccgggccAGAAAGGGAAGA-TATTTTTAAGAGCGATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54922289 164 + 59248254 taattttttatttttagtagagacggggtttcaccatgttggccaggctggtctcgaattcttgacctcaggtgatccgcctgcctcggcctcccaaagcaccgggattacaggcgtgagccaccgcgccgggccAGAAAGGGAAGA-TTTTTTTAAGAGCGATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040025 165 + 51301725 taattttttacttttagtagagacggggtttcaccatgttggccaggctggtctcgaattctcgacctcaggtgatccgcctgcctcggcctcccaaagcaccgggattacaggcgtgagccaccgcgcccggccacaaagggaagattttttttaagagcGATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46752826 164 + 50890351 taattttttatttttagtagagacagggtttcaccatgttggccaggctggtctggaattcttgacctcaggtgatctgcctgcctcggcctcccaaagcaccgggattacaggcgtgagccaccacgctcggccAGAAAGGGAAGA-TTTTTTAAAGAGCGATG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e calJac3.chr22 45330114 9303 + 49145316 T a score=559368.000000 s hg38.chr19_GL949747v2_alt 48186 208 + 729520 ATATTGTAAGTAATGAAGAAATGAGATTCACAGAAGAACAAAACAATCTCTGATTAAAAACAACACACACA-GTTCCTCAAAACCATACACGCCCTTACCTGTCACCAATATCTCAAGCTGATCACTGGGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACATGCAGCTGTAGTTCCCAG-------------CATCGCCGGCTGTCACGTCCACC s panTro4.chr19 58982295 208 + 63644993 ATATTGCAAGTAATGAAGAAATGAGATTCACAGAAGAACAAAACAATCTCTGATTAAAAACAACACACACA-GTTCCTCAAAACCATACACGCCCTTACCTGTCACCAATATCTCAAGCTGATCACTGGGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACATGCAGCTGTAGTTCCCAG-------------CATCGCCGGCCGTCACGTCCACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55852070 208 + 60714840 ATATTGCAAGTAATGAAGAAATGAGATTCACAGAAGAACAAAACAATCTCTGATTAAAAACAACACACACA-GTTCCTCAAAATCATACATGCCCTTACCTGTCACCAATATCTCAAGCTGATCACTGGGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACATGCAGCTGTAGTTCCCAG-------------CATCGCCAGCTGTCACGTCCTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102616225 208 - 106955855 ATATTGCGAGTCATGCAGAAATGAGATTCACAGAAGAACAAAACAATCTCTGATTAAAAACAACACACACA-GTTCCTCAAAATCATACATGCCCTTACCTGTCACCAACATCTCAAGCTGATCACTGGGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACATGCAGCTGTAGTTCCCAG-------------CATCGCCGGCTGTCACGTCCTCC i nomLeu3.chr10 C 0 I 315 s rheMac3.chr19 59904132 208 + 64156825 ATATTGCGAGTAATGAGGAAATGAGATTCACAGAAGAACAAAACAACCTCTGATTAAAAACAACACACACA-GTTCTTCAAAATCATACACATCCTTACCTGTCACCAATATCTCAAGCCAATCACTGCGTTCTGAGGCCCAGAAGGGAGACTTTGCCTGGTAGTACACGCAGCTGTAGTTCCCAG-------------CGTCGCCGGCTGTCACGTCCTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54922453 208 + 59248254 ATATTGCGAGTAATGAGGAAATGAGATTCACAGAAGAACAAAACAACCTCTGATTAAAAACAACACACACA-GTTCTTCAAAATCATACACATCCTTACCTGTCACCAATATCTCAAGCCAATCACTGCGTTCTGAGGCCCAGAAGGGAGACTTTGCCTGGTAGTACACGCAGCTGTAGTTCCCAG-------------CGTCGCCGGCTGTCACGTCCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040190 208 + 51301725 ATATTGCGAGTAATGAGGAAATAAGATTCACAGAAGAACAAAACAACCTCTgattaaaaacaacacacacc-GTTCTTCAAAATCATACACATCCTTACCTGTCACCAATATCTCAAGCCAATCACTGCGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACACGCAGCTGTAGTTCCCAG-------------CGTTGCCGGCTGTCACGTCCTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46752990 208 + 50890351 ATATTGCGAGTAATGAGGAAATGAGATTCACAGAAGAACAAAACAACCTCTGATTAAAAACAACACACACA-GTTCTTCAAAATCATACACATCCTTACCTGTCACCAATATCTCAAGCCAATCACTGTGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACATGCAGCTGTAGTTCCCAG-------------CGTCGCCGGCTGTCACGTCCTCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19532159 212 - 122678785 atAATGGACATGATGGAGAAATGAGAATCAGAGACTAGCAGAACACTCTCTGAT--------ATATATACATTTTTTTCCTTATCATGCAAAACCTTACCTGTTACCAAGATTTCGGG-TGGTTATTGGGTG-GGAGGTCAAGAAAGGAGCCTTTATCTGGTGGTAGACAACTCTGCAGTTTCCAGAAACGATTTCCAAAATCGTTGACTGTCACATTTTGA i canFam3.chr1 I 1673 C 0 e calJac3.chr22 45330114 9303 + 49145316 T a score=5348.000000 s hg38.chr19_GL949747v2_alt 48394 2 + 729520 AG s panTro4.chr19 58982503 2 + 63644993 AG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55852278 2 + 60714840 AG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59904340 2 + 64156825 AG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54922661 2 + 59248254 AG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040398 2 + 51301725 AG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46753198 2 + 50890351 AG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19532371 2 - 122678785 AG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45330114 9303 + 49145316 T e nomLeu3.chr10 102616433 315 - 106955855 I a score=1007578.000000 s hg38.chr19_GL949747v2_alt 48396 415 + 729520 AGAGAAGTCTATCTCCTTCCCCGCTGGACTCTGCAGCTGGATGGGTGATGGCGTCCCTGCCTTCAGTAGAGCGAACATGATAGGCACAAACAATTGGTCTCGCTTCTGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACTGTACCCCTTTGGTAGGTTCGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGTTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCCACTCACCCCTGTTCTCCTGGCCGGAGGCTCTCGTGGAGTGTGGGAAATGAGAGATTCCTGATCTCTTCTACCTTCCTCCACTTCCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTACAAGACCTGTGTAAggcctggcatggtggctcacacctgtaatcccagcactttgggagg s panTro4.chr19 58982505 415 + 63644993 AGAGAAGTCTATCTCCTTCCCCGCTGGACTCTGCAGCTGGATGGGAGATGGCGTCCCTGCCTTCAGTAGAGCGAACATGATAGGCACAAACAATTGGTCTCGCTTCTGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACTGTACCCCTTTGGTAGGTTCGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGCTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCCACTCACCCCTGTTCTCCTGGCCGGAGGCTCTCGTGGAGTGTGGGAAATGAGAGATTCCTGATCTCTTCTACCTTCCTCCACTTCCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTACAAGACCTGTATAAggcctggcatggtggctcacacctgtaatcccagcactttgggagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55852280 415 + 60714840 AGAGAAGTCTATCTCGTTCCCCGCTGGACTCCGCCGCTGGATGGGTGATGACGTCCCTGCCTTCAGTAGAGCAAACATGATAGGCACAAACAATTGGTCTTGCTTCTGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACTGTACCCCTTTGGTAGGTTTGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGCTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCCACTCACCCCTGTTCTCCTGGCTGGAGGCTCTCACGGAGTGTGGGAAATGAGAGATTCCTGATATCTCCTACCTTCCTCCACTTCCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTACAAGACCTGTATAAggccgggcatggtggctcacacctgtaatcccagcactttgggagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102616748 415 - 106955855 AGAGAAGTCTATCTCCTTCCCTTCTGGACTCCGCAGCTGGATGGGCGATGACGTCCCTGCCTTCAGTAGAGCGAACATGATAGGCACGAACAATTGGTCTCGCTTCTGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACTGTACCCCTTTGGTAGGTTTGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGACTCTGAGGTCCTGGGGAGAAGTCTGGAATCTCCCACTCACCCCTGTTCTCCTGGCCGGAGGCTCTCATGGAGTGTGGGAAATGAGAGATTCCTGATCTCTTCTACCTTCCTCCACTTTCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTACAAGACCTGTATAAggccgggcatggtggctcacacctataatcccagcactttgggagg i nomLeu3.chr10 I 315 C 0 s rheMac3.chr19 59904342 405 + 64156825 GGAGAAGTCCGTCTCCTCCCCCGCTGGACTCCGCAGCTGGATGGCAGATGACGTCCCTGCCTTCAGTAGAGCAAACATGATAGGCAGAAACAGTTGGTCTGGCTGCCGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACCGTACCCCTTTGGTGGGTTTGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGCTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCTACTCGCCCCTGTTCTCCTGGCCGGAGGCTCTCATGGAGTGTGGGAAATCAGAGACTTCTGATCTCTTCCACCTTCCTCCACTTTCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTGCAAGACCTGTATAAggccgggcgtggtggctcacacctgtaatcccagca---------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54922663 405 + 59248254 GGAGAAGTCCGTCTCCTTCCCCGCTGGACTCCGCAGCTGGATGGCAGATGACGTACCTGCCTTCAGTAGAGCAAACATGATAGGCAGAAACAGTTGGTCTGGCTGCCGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACCGTACCCCTTTGGTGGGTTTGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGCTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCTACTCGCCCCTGTTCTCCTGGCCGGAGGCTCTCATGGAGTGTGGGAAATCAGAGACTTCTGATCTCTTCCACCTTCCTCCACTTTCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTGCAAGACCTGTATAAggccgggcgtggtggctcacacctgtaatcccagca---------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040400 405 + 51301725 GGTGAAGTCCGTCTCCTTCCCCGCTGGACTCCTCAGCTGGATGGCAGATGACGTCCCTGCCTTCAGTAGAGCAAACATGATAGGCAGAAACAGTTGGTTTGGCTGCCGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACCGTACCCCTTTGGTGGGTTTGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGCTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCTACTCACCCCTGTTCTCCTGGCCAGAGGCTCTCATGGAGTGTGGGAAATCAGAGATTCCTGATCTCTTCCACCTTCCTCCACTTTCTACTCCGACCCCAGGACGGAGATTCTCCCTCCTGCAAGACCTGtataaggccgggcgtggtggctcacacctgtaatcccagca---------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46753200 405 + 50890351 GAAGAAGTCCGTCTCCTTCCCCGCTGGACTCCGCAGCTGGATGGCAGATGATGTCCCTGCCTTCAGTAGAGCAAACATGATAGGCAGAAACAGCTGGTCCGGCTGCCAGCACTGCAGAGTCACCCTTCCACCTACGGTCACCGTACCCCTTTGGTAGGTTTGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGCTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCTACTCGCCCCTGTTCTCCTGGCTGGAGGCTCTCATGGAGTGTGGGAAATCAGAGATTCCTGAACTCTTCCACCTTCCTCCACTTTCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTGCAAGACCTGTATAAggccggccgtagtggctcacacctgtaatcccagca---------- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19532373 308 - 122678785 AGAAAAGTCTGCCCGTTTTCCTTCAGGTCTATGGTGCTGTACATGCTTTCTAGTACTTGTCTTCAGGAGAACCAACATCACATGTTCAAGCA--TATTCTGGCCTGTGGCACTACAGAGTCACATTTCTTCCCTGGGTCACCTTA-----------GGCTTGGAGAGAAGGTTTGGGCAAACTTCCTGTAAGAGAAGATCACTTCCTG----CAAGGGAAG----------------ATTAATTCCTGT---------------------------------AAGGGAAGATT-----------------------ACTTCCTG---------TAAGGTAAGGTCACTACCTGTAACAA------TGTCAGAGGTAGCCTGGTTTCTCTCCTTC----CCTTGGCCTTCTGGGAGG i canFam3.chr1 C 0 I 3169 e calJac3.chr22 45330114 9303 + 49145316 T a score=405849.000000 s hg38.chr19_GL949747v2_alt 48811 189 + 729520 ccaaggcgggtggatcacctgaggtcaggagttcgagaccagcctgcccaacatggcgaaaccctgtctctactaaaaatacaaaaattagccgggcatggtggcaggcacctgtaatcccagctgctcaggaggctggagcaggagaatcacttgagcccaggaggcggaagttgcagtgagccgaga s panTro4.chr19 58982920 189 + 63644993 ccaaggcgggtggatcacctgaggtcaggagttcgagaccagcctgcccaacatggcaaaaccctgtctctactaaaaatacaaaaattagccgggcgtggtggcaggcgcctgtaatcccagctgctaaggaggctggagcaggagaatcacttgagcccaggaggcggaagtggcagtgagccgaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55852695 189 + 60714840 ccgaggtgggcagatcacctgaggtcaggagttcgagaccagcctgcccaacatggcgaaaccctgtctctactaaaaatacaaaaattagctgggcgtggtggcaggcacctgtaatcccagctgctcaggaggctggagcaggagaatcacttgagcccaagaggcggaagttgcagtgagccgaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617163 189 - 106955855 ccgaggtgggcggatcacctgaggtcaggagtttgacatcagcctgcccaacatggcaaaacgctgtctctactaaaaatacaaaaattagccgggcacgttggcaggcacctgtaatcccagctgctcaggaggctggagcaggagaatcacttgagcccaggaggcggaagttgcagtgagccgaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59904747 171 + 64156825 ------------------ctgaggacgggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccgggcatggtggcacacacctgtaatcccagctactcaggaggctgaggcaggagaatcagttgagcccaggaggcggaggtggcagtgagtcaaga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923068 171 + 59248254 ------------------ctgaggtcgggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccgggcatggtggcacacacctgtaatcccagctactcaggaggctgaggcaggagaatcagttgagcccaggaggcggaggttgcagtgagtcaaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040805 171 + 51301725 ------------------ctgaggtcgggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaagtacaaaaattagccgggcatggtggcacacacctgtaatcccagctactcaggaggctgaggcaggagaatcagttgagcccaggaggcggaggttgcagtgagtcaaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46753605 171 + 50890351 ------------------ctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaagaattagccgggtgtggtggcacacacctgtaatcccagctactcaggaggctgaggcaggaaaatcagttgagcccaggaggcagaggttgcagtgagtcaaga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19532681 3169 - 122678785 I e calJac3.chr22 45330114 9303 + 49145316 T a score=585205.000000 s hg38.chr19_GL949747v2_alt 49000 231 + 729520 tggcaccactgcactctggcctgggcgacaaa----gTATAAAACCAACATATGCAATTTCGTTCCTG-TCTCTCTCCCTCTCCCATCACCCCCAACTACTCTGAAGGTGGGACCCCTTTTCTCCCTCTGTTCCTCCACTTCCTCCCTCATCCCCTGTCCCCCGTATGTCATTGGCAGGCACCCTGTCTGTACCTGTCACCAACAGTAGAAGGACGTCACTGCGCTGTGAAAGGAT s panTro4.chr19 58983109 231 + 63644993 tggcaccactgcactctggcctgggcgacaga----gTATAAAACCAAGATATGCAATTTTGTTCCTG-TCTCTCTCCCTCTCCCGCCACCCCCAACTACTCTGGAGGTGGGACCCCTTTTCTCCCTCTGTTCCTTCACTTCCTCCCTCATCCCCTGTCCCCCGTATGTCATTGGCAGGCACCCTGTCTGTACCTGTCACCAACAGTAGAAGGACGTCACTGCGCTGTGAAAGGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55852884 232 + 60714840 tggcaccactgcactctggccagggcgacaga----gTATAAAACCAAGATATGCAATTTCGTTCCTGTTCTCTCTCCCTCTCCCGCCACCCCCAACTACTCTAGAGGTGGGACCCCTTTTCTTCCTCTGTTCCTCCTCTTCCTCCCTTATCCCCTGTCCCCCGTATGTCATTGGCAGGCACCCTGTCTGCACCTGTCACCAACAGTAGAAGGACGTCACTGTGCTGTGAAAGGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617352 231 - 106955855 tgacaccactgcactctggcctgggcgacaga----gTATAAAACCAAGATATGCAATTTCATTCCTG-TCTCTCTCCCTCTCCCGCCACCCCCAACTACTCTGGAGGTGGGACCCCTTTTCTCCCCCTGTTCCTCCACTTCCTCCCTCATCCCCTGTCCCCCATATGTCATTGGTAGGCACCCTGTCTGCACCTGTCACCAACAGTAGAAGGGCGTCACTGTGCTGTGAAAGGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59904918 230 + 64156825 tggcaccactgcactccggcctgggtgacaga----gTATAAAACCAAGGTATGCAATTTCATTCCTG-TCTCTCTCCCTCTCCCACCACCCCCAGCCACCCTGGAGGTGGGACCCCTTTTCTCCCTCTG-CCCTCTGCTTCCTCCCTCATCCCCTGCCCCCCGTATGTCATCGGCAGGCACCCTATCCACACCTGTCACCAACAGCAGAAGGACGTCACTGCGCTGTGAAGGGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923239 230 + 59248254 tggcaccactgcactccggcctgggtgacaga----gTATAAAACCAAGGTATGCAATTTCATTCCTG-TCTCTCTCCCTCTCCCACCACCCCCAGCTACCCTGGAGGTGGGACCCCTTTtctccctctg-ccctctgcttcctccctcatcccctgcccCCCGTATGTCATCGGCAGGCACCCTATCCACACCTGTCACCAACAGCAGAAGGACGTCACTGCGCTGTGAAGGGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040976 230 + 51301725 tggcaccactgcactccggcctgggtgacaga----gtataaAACCAAGGTATGCAATTTCattcctg-tctctctccctctcccaccacccccagctaccctggaggtgggactccttttctccctctg-tccTCTGCTTCCTCCCTCATCCCCTGCCCCCCGCATGTCATCGGCAGGCACCCTATCCACACCTGTCACCAACAGCAGAAGGACGTCACTGCGCTGCGAAGGGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46753776 230 + 50890351 cggcaccactgctctccggcctgggtgacaga----gTATAAAACCAAGGTATGCAATTTCATTCCTG-TCTCTCTCCCTCTCCCACCACCCCCAGCTACCCTGGAGGTGGGACTCCTTTTCTCCCTCTG-TCCTCTGCTTCCTCCCTCATCCCCTGTCCCCCGTATGTCATCGGCAGGCACCCTATCCACACCTGTCACCAACAGCAGAAGGACGTCACTGCGCTGTGAAGGGAT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19535850 201 - 122678785 TGGTCTCACCCTCTTCTGACTCTGACTACAAGCCCTGGGTGAAGCCCAGCCAAGTCGTTCTGCTGCTG-TGTTTCTCCATCTCCCCTTGCCCCC--------------------------CCTCCCCGCCTCCCTGGGGTTCCTCCCCCA-CACCTGTCCC-----TGTTACTCCGAAGCACCC--TCCTCACCTGTCACCAGCAGGAGGAGGATGTCACTGGGCTGTGAACTTAT i canFam3.chr1 I 3169 C 0 e calJac3.chr22 45330114 9303 + 49145316 T a score=828846.000000 s hg38.chr19_GL949747v2_alt 49231 258 + 729520 GTGGGGGGATGCTTTTCTGTAGTATTCACAGGTGTACTCTCCAGCATTTCTGACTTTTAGATTATTGAGGTGAAATTCGGCCGCGCCCTCTGTAGAATCAAGGGGCTTCG---GGGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACACCTCTGGCAGGAGTCCAACATCGCAGCGTCACATTGCTGTTGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA s panTro4.chr19 58983340 258 + 63644993 GTGGGGGGATGCTTTTCTGTAGTATTCACAGGTGTACTCTCCAGCATTTCTGACTTTTAGATTATTGAGGTGAAATTTGGCCGCACCCTCTGTAGAATCAAGGGGCTTCG---GGGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACACCTCTGGCAGGAGTCCAACATCGAAGCGTCACATTGCTGTTGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853116 258 + 60714840 GTGGGGGGACGCTTTTCTGTAGTATTCACAGGTGTACTCTCCAGCATTTCTGACTTTTAGATTATTGAGGTGAAATTCGGCCGCGCCCTGTGTAGAATCAAGGGGCTTCG---GGGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACACCTCTGGCAGGAGTCCGACATTGCAGTGTCACATTGCTGTTGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617583 258 - 106955855 GTGGGGGGATGCTTTTCTGTAGTATTCGCAGGTGTACTCTCCAGCATTTCTGACTTTTAGATTATTGAGGTGAAATTTGGCCGCGCCCTCTGTAGAATCAAGGGGCTTCG---GGGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACACCTCTGGCAGGAGTCCAACAACGCAGCGTCACATTGCTGTTGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59905148 258 + 64156825 GTGGGGGAACGCTTTTCTGTAGTATTCGCAGGTGTACTCTCCAGCATTTCTGATTTTTAGATTATTGAGGTGAAATTTGGCCGGGCCCTCTGTCGAATCAAGGGGCTTCG---GAGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACGCCTCTCGTAGGCGTCCAGCATCGCAGCGTCACATTGCTGTTGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923469 258 + 59248254 GTGGGGGAACGCTTTTCTGTAGTATTCGCAGGTGTACTCTCCAGCATTTCTGATTTTTAGATTATTGAGGTGAAATTCGGCCGGGCCCTCTGTCGAATCAAGGGGCTTCG---GAGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACGCCTCTCGTAGGCGTCCAGCATCGCAGCGTCACATTGCTGTTGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041206 258 + 51301725 GTGGGGGGACGCTTTTCTGTGGTATTCGCAGGTGTACTCGCCAGCATTTCTGATTTTTAGATTCTTGAGGTGAAATTCGGCCGGGCCCTCTGTTGAATCAAGGGGCTTCG---GAGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACGCCTCTGGTAGGCGTCCAGCATCGCAGCGTCACATTGCTGTCGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754006 258 + 50890351 GTGGGGGGACGCTTTTCTGTAGTATTCGCAGGTGTACTCTCCAGCATTTCTGATTTTTAGATTATTGAGGTGAAATTCGGCCGGGCCCTCTGTCGAATCAAGGGGCTTCG---GAGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACGCCTCTGGTAGGCGTCCAGCATCGCAGCGTCACATTGCTGTCGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45320811 252 + 49145316 GTGGGAGACTGCTGTCTTGTAG---GCACAAAAGTACCTCCCAGCATCCTTGGGCTTCAAGTGCATGAAGGGGAATTCCGCTTCGCTTCCTGCCGAGCTCTG----TTCGCGCTGGAATGCAGAGTCGTTC--ACCTTGCGCAGCGTGAATGTCACATTCTGGGAAGGAGCCCGACACTTCAGGGTCACGTTGCTCTTGGCTTCAGCCACCGAGCTGGGCCAGGCGTGGAGGGAGGGCTTGGACAGTTTCTCTGGAAAGAA i calJac3.chr22 T 9303 I 9366 s canFam3.chr1 19536051 258 - 122678785 TTGTGGGAGCTCTCGTCTATAGTATTCGCAGGTGTATGGTCCAGCGTTACGGGTTTTTAGGTCATTGAGGTGAAATTCAGCCACGCCCTCTGTGGAAGCCAGTGATTGCA---AGGACTCTAAGATACTTCTTCCCTTTCTGAGAACAAAGTTGACGTTCTTGGTGGAAGTCTGGCATTGCAGTGTCACATTGCTCTTGGAAAGCATCATCCAGCTGGGCCAGGCACTGAGGGAGGGCTTGGGAAGGGTCTCTGGAAGGAA i canFam3.chr1 C 0 C 0 a score=130141.000000 s hg38.chr19_GL949747v2_alt 49489 53 + 729520 GCAGAGCCTGATGCTGGACCCGATGC---CCTCCCCTGCTCTCAGGAAGCCCTTTT s panTro4.chr19 58983598 53 + 63644993 GCAGAGCCTGATGCTGGACCCGATGC---CCTCCCCTGCTCTCAGGAAGCCCTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853374 56 + 60714840 GCAGAGCCCGGTGCTGGACCCAACGCCCTCCTCCCCTGCTCTCAGGAAGCCCTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617841 52 - 106955855 ACAGAGCCTGGTGCTGGACCCAATGC---CCTCCCCTGCTCTCAGG-AGCCCTTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59905406 53 + 64156825 GCAGAGCCCAGTGCTGGGCCTGACGC---CCTTCCCTGCTCTCAGAAAGCCCTTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923727 53 + 59248254 GCAGAGCCCAGTGCTGGGCCTGACGC---CCTTCCCTGCTCTCAGAAAGCCCTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041464 53 + 51301725 GCAGAGCCCAGTGCTGGGCCTGACGC---CCTTCCCTGCTCTCAGAaagccctttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754264 53 + 50890351 GCAGAGCCCAGTCCTGGGCCTGACGC---CCTTCCCTGCTCTCAGAAAGCCCTTTT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19536309 53 - 122678785 GCAGATTTGGGGATGGGATTTGGTGC---CCTGAGCTGCTCTCAAGAAGTCTCTTT i canFam3.chr1 C 0 I 1046 e calJac3.chr22 45321063 9366 + 49145316 I a score=33584.000000 s hg38.chr19_GL949747v2_alt 49542 20 + 729520 TAAAAt-----------------------ttattattattatt s panTro4.chr19 58983651 26 + 63644993 TAAAAT-----------------ttattattattattattatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853430 17 + 60714840 TAAAAt--------------------------ttattattatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617893 43 - 106955855 TAAAATttattattatattattattattattattattattatt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59905459 20 + 64156825 TAAACT-----------------------ttattattattatt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923780 20 + 59248254 TAAACT-----------------------ttattattattatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041517 20 + 51301725 taaaat-----------------------ttattattattatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754317 20 + 50890351 TAAAAT-----------------------ttattattattatt i chlSab2.chr6 C 0 I 32 e canFam3.chr1 19536362 1046 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=627.000000 s hg38.chr19_GL949747v2_alt 49562 1 + 729520 a s panTro4.chr19 58983677 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853447 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617936 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59905479 1 + 64156825 a i rheMac3.chr19 C 0 I 19 s macFas5.chr19 54923800 1 + 59248254 a i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47041537 1 + 51301725 t i papAnu2.chr19 C 0 I 4 e canFam3.chr1 19536362 1046 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46754337 32 + 50890351 I a score=6825.000000 s hg38.chr19_GL949747v2_alt 49563 5 + 729520 ttatt s panTro4.chr19 58983678 5 + 63644993 ttatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853448 5 + 60714840 ttatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617937 5 - 106955855 ttatt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54923802 5 + 59248254 ttatt i macFas5.chr19 I 1 I 13 s papAnu2.chr19 47041542 5 + 51301725 ttatt i papAnu2.chr19 I 4 I 10 e canFam3.chr1 19536362 1046 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46754337 32 + 50890351 I e rheMac3.chr19 59905480 19 + 64156825 I a score=6780.000000 s hg38.chr19_GL949747v2_alt 49568 13 + 729520 ttgagatggagtc s panTro4.chr19 58983683 13 + 63644993 atgagatggagtc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853453 13 + 60714840 ttgagatggagtc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617942 13 - 106955855 TTGAGATGGAGTC i nomLeu3.chr10 C 0 M 1546 e canFam3.chr1 19536362 1046 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46754337 32 + 50890351 I e papAnu2.chr19 47041547 10 + 51301725 I e macFas5.chr19 54923807 13 + 59248254 I e rheMac3.chr19 59905480 19 + 64156825 I a score=65497.000000 s hg38.chr19_GL949747v2_alt 49581 253 + 729520 tccctctgttgcccaggctagagtgcagtggtgcaatctcagttcactgcaacctccgtctcctgggttaaagcaattctcctgcctcagcctcccaagtaggtgggattacaggcacgcaccaccacacccagctaattttgtattttagtagagacaaggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcccaaagtgctgggattacaggcgtga s panTro4.chr19 58983696 253 + 63644993 tccctctgttgcccaggctagagtgcagtggcgcaatcttagttcactgcaacctccgtctcctgggttaaagcaattctcctgcctcagcctcccaagtaggtgggattacaggcacgcaccaccacacccagctaattttgtattttagtagagacaaggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcccaaagtgctgagattacaggcatga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853466 253 + 60714840 tccctctgttgcccaggctagagtgcagggatgcaatctcagctcactgcaacctctgtctcccgggttaaagtgattctcctgccttagcctcccgagcagctgggattacaggcacgcaccaccacacctggctaattttgtattttcgtagagacaaatttccaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccactttggcctcccaaagtcctgggattataggcgtga i ponAbe2.chr19 C 0 I 5654 e canFam3.chr1 19536362 1046 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102617955 1546 - 106955855 M e chlSab2.chr6 46754337 32 + 50890351 I e papAnu2.chr19 47041547 10 + 51301725 I e macFas5.chr19 54923807 13 + 59248254 I e rheMac3.chr19 59905480 19 + 64156825 I a score=291.000000 s hg38.chr19_GL949747v2_alt 49834 3 + 729520 acc s panTro4.chr19 58983949 3 + 63644993 acc i panTro4.chr19 C 0 C 0 e canFam3.chr1 19536362 1046 - 122678785 I e ponAbe2.chr19 55853719 5654 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102617955 1546 - 106955855 M e chlSab2.chr6 46754337 32 + 50890351 I e papAnu2.chr19 47041547 10 + 51301725 I e macFas5.chr19 54923807 13 + 59248254 I e rheMac3.chr19 59905480 19 + 64156825 I a score=9642.000000 s hg38.chr19_GL949747v2_alt 49837 12 + 729520 cctgagcccAAT s panTro4.chr19 58983952 12 + 63644993 cctgagcccAAT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59905499 12 + 64156825 CCTGCGCCCAAC i rheMac3.chr19 I 19 C 0 s macFas5.chr19 54923820 12 + 59248254 CCTGCGCCCAAC i macFas5.chr19 I 13 C 0 s papAnu2.chr19 47041557 12 + 51301725 cctgcGCCCAAC i papAnu2.chr19 I 10 C 0 e canFam3.chr1 19536362 1046 - 122678785 I e ponAbe2.chr19 55853719 5654 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102617955 1546 - 106955855 M e chlSab2.chr6 46754337 32 + 50890351 I a score=54171.000000 s hg38.chr19_GL949747v2_alt 49849 44 + 729520 CAGGAATCCCATTTTAAGAAGGGAAGCGggctgggtgcggtggc s panTro4.chr19 58983964 44 + 63644993 CAGGAATCCCATTTTAAGAAGGGAAGGGggctgggtgcggtggc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59905511 44 + 64156825 CAGGAAGCCTATTTTAAGAAGGGAAACGggccaggcgcggtggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923832 44 + 59248254 CAGGAAGCCTATTTTAAgaagggaaacgggccaggcgcggtggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041569 44 + 51301725 CAGGAAGCCTATTTTACGAAGGGAaacgggccaggcgcggtggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754369 44 + 50890351 CAGGAAGCCTATTTTAAGAAGGGAAATGggccaggcgcggtggc i chlSab2.chr6 I 32 C 0 e canFam3.chr1 19536362 1046 - 122678785 I e ponAbe2.chr19 55853719 5654 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102617955 1546 - 106955855 M a score=112748.000000 s hg38.chr19_GL949747v2_alt 49893 65 + 729520 tcacgcctgtaatcccagcaccttgggaggccaaggcaggcagatcacgaggtcatgagatcgag s panTro4.chr19 58984008 65 + 63644993 tcacgcctgtaatcccagcactttgggaggccaaggcaggcagatcacgaggtcatgagatcgag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102619501 65 - 106955855 tcaccccggtaatcccagcactttgggaggccgaggcgggcaaatcatgaggtcatgagattgag i nomLeu3.chr10 M 1546 C 0 s rheMac3.chr19 59905555 65 + 64156825 tcacgcctgtaatcccaacactttgggaggccgaggcgggaagatcacgaggtcggaagatcgag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923876 65 + 59248254 tcacgcctgtaatcccaacactttgggaggccgaggcgggaagatcacgaggtcgtaagatcgag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041613 65 + 51301725 tcacgcctgtcatcccaacactttgggaggccgaggcgggaagatcacgaggtcgtaagatcgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754413 65 + 50890351 tcacgcctgtaatcccaacactttgggaggccgaggcgggaagatcacgaggtcgtaagatcaag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19536362 1046 - 122678785 I e ponAbe2.chr19 55853719 5654 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I a score=478785.000000 s hg38.chr19_GL949747v2_alt 49958 219 + 729520 accatcctggccaacatggtgaaactccgtctctactaaaaatacaaaaattagctgggcgtggtggcaagcacccgtagtcccagctacttgggaggctgagacaggagaatcacttgagcccaggaggcggaggttgctgtaagccgagattgcaccaccgcactccagcctggcgaaagagtgagactccgtc--------------aaaaaaaaaagagaaaaaGAGGG s panTro4.chr19 58984073 218 + 63644993 accatcctggccaacatggtgaaactccgtctctactaaaaatacaaaaattagctgggcatggtggtaagcacccgtagtcccagctacttgggaggctgagacaggagaatcacttgaacccaggaggcggaggttgctgtaagccgagattgcaccaccgcactccagcctggcgaaagagtgagactccgtc---------------aaaaaaaaagggaaaaaGAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55859373 233 + 60714840 accatcctggccaacatggtgaaactccgtctctaccaaaaatacaaaaattagctgggcattgtggcaagcacctgtagtcccagctactcgggaggctgagacaggagaatcacttgaacccaggaggcggagtttgctgtaagccgagattgcaccactgcactccagcctggtgaaagagtgagactctgtcaaaaagaaaaaaaaaaaaaagaaaaagaaaaaGAAGG i ponAbe2.chr19 I 5654 C 0 s nomLeu3.chr10 102619566 219 - 106955855 accattttggccaacatggtgaaactccgtctctactaaaaatacaaaaattagctgggcgtggtggcaagcacctgtcgtcccagctacttgggaggctgagacaggagaatcacctgaacccaggaggcggaggttgctataagccgagattgcaccaccgcactccagcctggcgaaagagtgagactctgtc--------------aaaaaaaaaaaaaaaatagaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59905620 211 + 64156825 accatcctggccaacatggtgaaactctgtatctactacaaatacaaaaattagccgggcgcggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgctgtaagctgagatcgcaccaccacactccagcctggcgaaagagtgagactccgtc----------------------aaaaaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923941 213 + 59248254 accatcctggccaacatggtgaaactctgtatctactacaaatacaaaaactagccgggcgtggtggc-ggcgcctgtagtcccagctactcaggaggctgaggcgggagaatggcgtgaacccgggaggcggagcttgctgtaagctgagatcgcaccaccacactccagcctggcgaaagagtgagactccgtc-------------------aaaaaaaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041678 214 + 51301725 accatcctggccaacatggtgaaactccgtatctactacaaatacaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctactcgggaggttgaggcaggagaatggcgtgaacccgggaggcggagcttgctgtaagctgagatcgcaccaccacactccagcctggcgaaagagtgagactccatc-------------------aaaaaaaaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754478 217 + 50890351 accatcctggccaacatggtgaaactccgtatctactacaaatacaaaaattagccgggcgtggtggcaggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaacccgggaggcggagcttgctgtaagctgagatcgcaccaccacactccagcctggtgaaagagtgagactccatc----------------aaaaaaaaaaaaaaaaaaaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19536362 1046 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=929069.000000 s hg38.chr19_GL949747v2_alt 50177 374 + 729520 GGAAGGGGAAGAGAACAGCAGGGGATTTGGGATGACAGGCCAAGGAGGGTGTAGTTGAAGAAACACTCACCATCTCCCCTTGTGTCTCCTTGGCCCACGCACAGTCCTGCAAGACAATCCTCCGTGAGCCAGAAGCCCCTACCTGGAGCCACGTCACCCCCTGCCCTGACCCCTGGAGATC-GTCCCAGAGTCTCCTGCTGAGAACAGACCCTTAGAGGTCATACGCTCAGGAGTTCTCATTCTCCCCACACTGGACTGTGGCTTCTGCTCGACTTCCAGCTCCTCCATCCTTTCCCAGCGATTCTCCTTGACCATCCTGTGTGGCTGTCACCTCCCCCTGCTCCAGGCCT-TTC----------------CCACAAATCCTTCCATTCTCA s panTro4.chr19 58984291 374 + 63644993 GGAAGGGGAAGAGAACAGCAGGGAATTTGGGATGACAGGCCAAGGAGGGTGTAGTTGAAGAAACACTCACCATCTCCCCTTGTGTCTCCTTGGCCCACGCACAGTCCTGCAAGACAATCCTCCGTGAGCCAGAAACCCCTACCTGGAGCCACGTCACCCCCTGCCCTGACCCCTGGAGATC-GTCCCAGAGTCTCCTGCTGAGAACAGACTCTTAGAGGTCATACGCTCAGGAGTTCTCATTCTCCCCACACTGGACTGTGGCTTCCGCTCGACTTCCAGCTCCTCCATCCTTTCCCAGAGATTCTCCTTGACCATCCTGTGTGGCTGTCACCTCCCCCTGCTCCAGGCCT-TTC----------------CCACAAATCCTTCCATTCTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55859606 374 + 60714840 GGAAGGGGAAGGGAACAGCAGGGAATTTGGGATGACAGGCCAAGGAGGGTGTAGTTGAGGAAACACTCACCATCTCCCTTTGGGTCTCCTTGGCCCACGCACAGTCCTGCAAGACAATCCTCTATGAACCAGAAGCCCCTGCCTGGAGCCACGTCACCCCCTGCCCTGACCCCTGGAGATC-GTCCCAGAGTCTCCTGCTGAGAATAGACCCTTAGAGGTCATACTCTCAGGAGTTCTCATTCTCCCCACACTGGACTGCGGCTTCCGCTCGACTTCCAGCTCCTCCGTCCTTTCCCAGAGATTCTCCTTGACCATCCTGTGTGGCTCTCACCTCCCCCCGCTCCAGGCCT-TTC----------------CCACAAATCCTTCCATTCTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102619785 354 - 106955855 agaaGGGGAAGGGAACAGCAGGGAATTTGGGATGACAGGCCAAGGAGGGTGTAGTTGAGGAAACACTCACCATCTCCCCCTGTGTCTCCTTGGCCCACGCACAGTCCTGCAAGACAATCCTCTGTGAGCCAGAAGCCCCTGCCTGGAGCCACATCGTCCCCTGCGCTGACCCCTGGAGACC-GTCCCAGAGTCTCCTGCTGAGAACAGACCCTTGGAGGTCATGCGCTCAGGAGTT--------------------CTGTGGCTTCCGCTCGACTCCCAGCTCCTCCGTCCTTTCCCAGAGATTCTCTTTGACCGTCCTGTGTGGCTCTCACCTCCCCCGGCTCCAGGCCT-TTC----------------CCACAAATCCTTCCATTCTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59905831 389 + 64156825 agaaGGGGAAGGGAACGGGAGGCAATTTGGGACGACGGGCCAAGGAGGGTGTGATTGAAGAAACACTCACCATCTCCCCTTGTGTCTCCTTGGCCCATGCACAATCCTGAAAGGCAATCCTCTGTGAGACAGAAGCCCCTGCCTGGAGCCACATCA-CCCCTACCCTGACCCCTGGAGACAGGTCCCAGAGTCTTCTGCTGAGTGCAGACCCTTGGAGGTCATGCGCTCAGGAGTTTTCATTCTCCCCACACTGGACTGTGGCTTCCGCTTGACTTCCAGCTCCCCCGTCGTTTCCCAGAGATTCTCCTTGAGTGTCCTGTGCGGCTCTCACCTCCCCCTGTTCCAGGCCT-TTCCTGGTTCCACATA-ATCCACACATCCTTCTATTCTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54924154 389 + 59248254 agaaggggaagggaacgggagggaaTTTGGGACAACGGGCCAAGGAGGGTGTGATTGAAGAAACACTCACCATCTCCCCTTGTGTCTCCTTGGCCCATGCACAATCCTGAAAGGCAATCCTCTGTGAGACAGAAGCCCCTGCCTGGAGCCACATCA-CCCCTACCCTGACCCCTGGAGACAGGTCCCAGAGTCTCCTGCTGAGTGCAGACCCTTGGAGGTCATGCGCTCAGGAGTTTTCATTCTCCCCACACTGGACTGTGGCTTCCGCTTGACTTCCAGCTCCCCCGTCGTTTCCCAGAGATTCTCCTTGACTGTCCTGTGCGGCTCTCACCTCCCCCTGTTCCAGGCCT-TTCCTGGTTCCACATA-ATCCACACATCCTTCTATTCTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041892 390 + 51301725 agaaggggaagggaacGGGAGGGAATTTGGGACAACGGGCCAAGGAGGGTGTGATTGAAGAAACACTCACCATCTCCCCTTGTGTCTCCTTGGCCCATGCACAGTCCTGAAAGACAATCCTCCGTGAGACAGAAGCCCCTGCCTGGAGCCACATCACCCCCTACCCTGGCCCCTGGAGACAGGTCCCAGAGTCTCCTGCTGAGTGCAGACCCTTGGAGGTCATGCGCTCAGGAGTTTTCATTCTCCCCACACTGGACTGTGGCTTCCGCTTGACTTCCAGCTCCCCCGTCGTTTCCCAGAGATTCTCCTTGACTGTCCTGTGCGGCTCTCACCTCCCCCTGTTCCAGGCCT-TTCCTGGTTCCACATG-ATCCACATATCCTTCTATTCTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754695 390 + 50890351 agaaGAGGAAGGGAACGGGAGGGAATTTGGGACAACGGGCCAAGGAGGGTGTGATTGAAGAAACACTCACCATCTCCCCTTGTGTCTCCTTGGCCCATGCACAGTCCTGAAAGACAATCCTCCGTGAGACAGAAGCCCCTGCCTGGAGCCACATCACCCCCTACCCTGACCCCTGGAGACAGGTCCCAGAGTCTCCTGCTGAGTGCAGACCCTTGGAGGTCATGTGCTCAGGAGTTTTCATTCTCCCCACACTGGACTGTGGCTTCCGCTTGACTTCCAGCTCCCCCGTCGTTTCCCAGAGATTCTCCTTGACTGTCCTGTGTGGCTCTCACCTCCCCCTGTTCCAGGCCT-TTCCTGGTTCCACATA-ATCCACACATCCTTCTATTCTCA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103185125 361 + 122678785 GGAAAGAGAAGGGACATG--GGGAGTTTGGAGTGA-AGGAGAGAGAGGGTCTAAATGAAGGA--ACTCACCATCAGTCATCCAGCTACTTTGGCCAACACACAGCCCTGTGAGAGAACTGTCCATGAGACACGAGCACCCGGCTGGAGGCCCGT-----CCCGAGGGGTCTCCTGGG---------CGGGGGCTGCTGCTGAGAACGGACCC-TGGAGATCATGCAACT--GGGTTCTCACT-TCCCCTCACTGGACTGTGGCTGCAGCTGTGCTCTCAGCTCCTGCCCCATTTCTCCAGGAAGGTC--------TCCTGTGTGGCTCTCACCTCACGTGGCCCCAGGACTGGTCCTGGTTCCACAGATGTTCACAAACCCTGTAATTCTTA i canFam3.chr1 I 1686 n 1046 e calJac3.chr22 45321063 9366 + 49145316 I a score=86147.000000 s hg38.chr19_GL949747v2_alt 50551 36 + 729520 TCTTCTGTTTGAAAACAGCACTCATTCTTACCAttt s panTro4.chr19 58984665 36 + 63644993 TCTTCTGTTTCAAAACAGCACTCATTCTTACCAttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55859980 36 + 60714840 CCTTCTGTTTCAAAACAGCACTCATTCTTACCAttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102620139 36 - 106955855 TCTTCTGTTTCAAAACGGCACTCATTCTTACCAttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59906220 36 + 64156825 TCTTCTGTTTCAATACGGCACTCATTCTTACCAttt i rheMac3.chr19 C 0 I 18 s macFas5.chr19 54924543 36 + 59248254 TCTTCTGTTTCAATACGGCACTCATTCTTACCATTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042282 36 + 51301725 TCTTCTGTTTCAGTACGGCACTCATTCTTACCATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46755085 36 + 50890351 TCTTCTGTTTCAATACAGCACTCATTCTTACCAttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=20721.000000 s hg38.chr19_GL949747v2_alt 50587 16 + 729520 ctttctttctttcttt s panTro4.chr19 58984701 16 + 63644993 ccttctttctttcttt i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 55860016 14 + 60714840 ctttctttctttct-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102620175 16 - 106955855 ctttctttcttttttt i nomLeu3.chr10 C 0 I 608 s macFas5.chr19 54924579 16 + 59248254 CTTACTTACtttcttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042318 16 + 51301725 cttacttactttcttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46755121 16 + 50890351 cttactttcttttttt i chlSab2.chr6 C 0 I 8 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e rheMac3.chr19 59906256 18 + 64156825 I a score=4460.000000 s hg38.chr19_GL949747v2_alt 50603 8 + 729520 ttctttcc s panTro4.chr19 58984719 8 + 63644993 ttctttcc i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 55860030 8 + 60714840 tccttcct i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54924595 8 + 59248254 tttttttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042334 8 + 51301725 ttttttcc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e chlSab2.chr6 46755137 8 + 50890351 I e rheMac3.chr19 59906256 18 + 64156825 I a score=906.000000 s hg38.chr19_GL949747v2_alt 50611 3 + 729520 ttt s panTro4.chr19 58984727 3 + 63644993 ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55860038 3 + 60714840 tct i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54924603 3 + 59248254 ttc i macFas5.chr19 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e chlSab2.chr6 46755137 8 + 50890351 I e papAnu2.chr19 47042342 0 + 51301725 C e rheMac3.chr19 59906256 18 + 64156825 I a score=2402.000000 s hg38.chr19_GL949747v2_alt 50614 143 + 729520 ctttctttct-tttttctttctttcattcattctttctttcattcattccagagacagagtctcgctctttctttctttttctttctttctttctttcattcattctttctttctttcattcattctttctttctttcattcat s panTro4.chr19 58984730 51 + 63644993 ctttctttctctctctctttctttcattcattctttctttcattcatt---------------------------------------------------------------------------------------------cat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55860041 83 + 60714840 ttctctctctctctccctttctttc-------------ttccttcctt------------------------------------------------ccttcctttctttctctctctctttctttcttcctttctttcttttat i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e chlSab2.chr6 46755137 8 + 50890351 I e papAnu2.chr19 47042342 0 + 51301725 C e macFas5.chr19 54924606 0 + 59248254 C e rheMac3.chr19 59906256 18 + 64156825 I a score=180.000000 s hg38.chr19_GL949747v2_alt 50757 1 + 729520 t s panTro4.chr19 58984781 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55860124 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47042342 1 + 51301725 c i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e chlSab2.chr6 46755137 8 + 50890351 I e macFas5.chr19 54924606 0 + 59248254 C e rheMac3.chr19 59906256 18 + 64156825 I a score=1531.000000 s hg38.chr19_GL949747v2_alt 50758 3 + 729520 cca s panTro4.chr19 58984782 3 + 63644993 cCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55860125 3 + 60714840 cca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54924606 3 + 59248254 ccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042343 3 + 51301725 cct i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e chlSab2.chr6 46755137 8 + 50890351 I e rheMac3.chr19 59906256 18 + 64156825 I a score=269629.000000 s hg38.chr19_GL949747v2_alt 50761 150 + 729520 gagacagagttgcgctctgtcgcccaggctggagtagagtgacgcaatctcggctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccaaatagctgggatcacaggcatgcgccaggacgcccggctgag s panTro4.chr19 58984785 150 + 63644993 gagacagactctcgctctgtcgcccaggctggagtagagtgacgcaatctcggctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagccttgcaaatagctgggattacaggcatgcgccaggacgcccggctgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55860128 150 + 60714840 gagacagagtctcgctctgtcgcccaggctggagtagagtgatgcaatctcggctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccaaatagctgggattacgggcatgcaccaggatgcccggctgag i ponAbe2.chr19 C 0 T 5767 s rheMac3.chr19 59906274 150 + 64156825 gagatagagtctcgctctgttgtccaggctggagtagagtgacgcaatctcagctcactgcaacctccgcctctccggttcaagtgattctcctgcctcagcctcccaaacagctgggatcacaggcatgtgtcaccacacccggctgag i rheMac3.chr19 I 18 C 0 s macFas5.chr19 54924609 150 + 59248254 gagatagagtctcactctgttgtccaggctggagtagagtgacgcaatctcggctcactgcaacctccgcctctccggttcaagtgattctcctgcctcagcttcccaaacagctgggatcacaggcatgtgtcaccacacccggctgag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042346 150 + 51301725 gaggtagagtctcgctctgtcgtccaggctggagtagagtgacgcaatctcggctcactgcaacctccgcctctccggttcaagtgattctcctgcctcagcctcccaaacagctgggatcacaggcatgtgtcaccacgcccggctgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46755145 150 + 50890351 gagatagagtctcgctctgttgtccaggctggagtagagtgacgcaatctcggctcactgcaacctccgcctctccagttcaagtgattctcctgcctcagcctcccaaacagctgggatcacaggcatgcgtcaccacacccggctgag i chlSab2.chr6 I 8 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I a score=665006.000000 s hg38.chr19_GL949747v2_alt 50911 361 + 729520 ttttgtattattagtagagacagggtttcaccatattgg-ccaggctggtctcgaactcctgacctcaggtgatccacccacctcggcctcccaaagtgccgggattacaggcatgagctttgtgcccag---c----------TTCTTTTTAttttttaatttttcattttattattgtgttttgagacagggtctctctctgttgcccaggttggagtgcagtggctccatcatggctcactgtagcctcccaggctcaagtgatcctcccacctcagcctcccgagtagctgggatcacaggtgtgcaccaccacacccggctaattttttagtctttcccagagacagagtctccctatgttgcccaggct s panTro4.chr19 58984935 361 + 63644993 ttttgtatttttagtagagacagggtttcaccatattgg-ccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcccaaagtgccgggattacaggcatgagctttgtgcccag---c----------TTCTTTTTAttttttaatttttcattttattattgtgttttgagacagggtctctctctgttgcccaggttggagtgcagtggctccatcatggctcactgtagcctcccaggctcaagtgatcctcccacctcagcctcccgagtagctgggatcacaggtgtgcaccaccacacccggctaattttttagtctttcgcagagacagagtctccctatgttgcccaggct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55854511 364 + 60714840 ttttgtattattagtagagacagggtttcaccatgttgg-ccaggctggtcttgaactcctgacctcaggtgatccacccacctcggcctcccaaagtgccgggattacaggcatgagctttgcgcctggccTC----------TTCTTTTTAttttttattttttaattttattattgtgttttgagacagggtctctctcttttgcccaggttggagtgcagtggctccatcatggctcaatgtagcctcccgggctcaagtgatcctcccacctcagcctcccgagtagctgggatcacaggtgtgcaccaccacacccggctaatattttagtcttttgcagagacagagtctccctatgttgcccaggct i ponAbe2.chr19 T 5767 C 0 s rheMac3.chr19 59906424 365 + 64156825 ttttgtgttattagtagagatggggtttcaccatgttagcccagactggtctcaaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgggactacaggcatgagccttgcacctggccTC----------TTCTTTTTAttttttaattttttattttattattgtgttttgagacagggtctctctctgttgcccaggttggagtacagtggctccatcatggctcactgtagcctcctgggctcaagtgatcctcccacctcagcctcccgagtagctggaatcacaggtgtgcgccaccacacctggctgattttttagtcttttgcagagacagagtctccctatgttgcccaggct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54924759 365 + 59248254 ttttgtgttattagtagagatggggtttcaccatgttagcccagactggtctcaaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgggactacaggcatgagccttgcacctggccTC----------TTCTTTTTAttttttaattttttattttattattgtgttttgagacagggtctctctctgttgcccaggttggagtacagtggctccatcatggctcactgtagcctcctgggctcaagtgatcctcccacctcagcctcccgagtagctggaatcacaggtgtgcgccaccacacctggctgattttttagtcttttgcagagacagagtctccctatgttgcccaggct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042496 365 + 51301725 ttttgtgttattagtagagacagggtttcaccatgttggcccagactggtctcaaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgccgggactacaggcatgagccttgcacctggcctc----------ttctttttattttttaattttttattttattattgtgttttgagacagggtctctctctgttgcccaggttggagtgcagtggctccatcatggctcactgtagcctcctgggctcaagtgatcctcccacctcagcctcccgagtagctggaatcacaggtgtgcaccaccacacctggctgattttttagtcttttgcagagacagagtctccctatgttgcccaggct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46755295 374 + 50890351 ttttgtgttattagtagagatggggtttcaccatgttgg-ccagactggtctcaaactcctgacctcaggtgatccacccacctcagcctcccaaagtgccgggactacaggcatgagccttgcacccggccTCTTCTTTTTATTTCTTTTTAttttttaattttttattttattattgtgttttgagacagggtctctctctgttgcccaggttggagtgcagtggctccatcatggctcactgtagcttcccaggctcaagtgatcctcccacctcagcctcctgagtagctggaatcacaggtgtgcgccaccacacctggctgattttttagtcttttgcagagacagagtctccctatgttgcccaggct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I a score=86062.000000 s hg38.chr19_GL949747v2_alt 51272 38 + 729520 CATGATCTCTTTTAATCCCTTCATGACTCCAAACAGGA s panTro4.chr19 58985296 38 + 63644993 CATGATCTCTTTTAATCCCTTCATGACTCCAAACAGGA i panTro4.chr19 C 0 I 25 s ponAbe2.chr19 55854875 38 + 60714840 CATGATCTCTTTTAATCCCTTAATGACTCCAAACAGGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59906789 38 + 64156825 CATGATCTCTTTTCATCCCTTCATGACTCCAAACAGGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54925124 38 + 59248254 CATGATCTCTTTTCATCCCTTCATGACTCCAAACAGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042861 38 + 51301725 catgaTCTCTTTTCATCCCTTCATGACTCCAAACAGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46755669 38 + 50890351 CATGATCTCTTTTCATCCCTTCATGACTCCAAACAGGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19537408 36 - 122678785 CATGATCTCTTTTCATCCCTGGAT-ACTCC-AACAGGA i canFam3.chr1 I 1046 C 0 e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I a score=169506.000000 s hg38.chr19_GL949747v2_alt 51310 108 + 729520 CAAAATTTATTGTTTGGTGTCCTGTAACAAGCCTCAAAACATCCAAATGGTCATTCCAGAAAGGGGAAAGCATA-CGTTCCTCCCTGTTTCACACATGGCTGCATTTGC s ponAbe2.chr19 55854913 108 + 60714840 CAAAATTTATTGTTTGGTGTCCTGTAACAAGCCTCAAAACATCCAAATGGTCTTTCCAGAAAGGGGAAAGCATA-CATTCCTCCCTGTTCCACACACAGCTGCATTTGC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59906827 108 + 64156825 CAAAATTTATTGTTTGGTGTCCTGTAACAAGCTTCAAAACATCCAAATGGTCATTCCAGAGAGGAGAAAGCATG-CATTCATCCCTGTTCCACACACAGCTGCCTTTAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54925162 108 + 59248254 CAAAATTTATTGTTTGGTGTCCTGTAACAAGCTTCAAAACATCCAAATGGTCATTCCAGAGAGGAGAAAGCATG-CATTCATCCCTGTTCCACACACAGCTGCCTTTAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042899 108 + 51301725 CAAAATTTATTGTTTGGTGTCCTGTAACAAGCTTCAAAACATCCAAATGGTCATTCCAGAGAGGAGAAAGCATA-CGTTCATCCCTGTTCCACACACAGCTGCGtttat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46755707 108 + 50890351 CAAAATTTATTGTTTGGTGTCCTGTAACAAGCTTCAAAACATCCAAATGGTCATTCCAGAGGGAAGAAAGCATA-CATTCATCCCTGTTCCACACACAGCTGCGtttat i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19537444 109 - 122678785 CAGAGTTTACCACTTGGTCCTCTGAAACAAGCCTCAAAGAATCCACATGGATATTCCAGAAAGGAGAAAACATACCATCCTTCCTTGCCCCCCTCACAGGTGCATCTGT i canFam3.chr1 C 0 I 344 e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e panTro4.chr19 58985334 25 + 63644993 I a score=104656.000000 s hg38.chr19_GL949747v2_alt 51418 84 + 729520 TCTTCCTCCTTTTTAA------TTTTTTTTG--ATAGAGACAGGGCTGGGCTGGTTAAGAACTCTTGACCATgccgggcgcggtggctcccg s ponAbe2.chr19 55855021 87 + 60714840 TCTTCTTCCTTTTTAA---TTTTTTTTTTTG--ATAGAAACAGGGCCGGGTTGGTTAAGAACTCTTGACCATgctgggcgtggtggctcacg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59906935 88 + 64156825 TCTTCTTCCTTTGTAA--TTTTTTTTTTTTT--ATAGAGACAGGGCCAGGCTGGTTAAGAACTCTTGACCATgccaggcgcggtggctcacg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54925270 90 + 59248254 TCTTCTTCCTTTGTAATTTTTTTTTTTTTTT--ATAGAGACAGGGCCAGGCTGGTTAAGAACTCTTGACCATgccaggcgcggtggctcacg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47043007 92 + 51301725 tcttcttcctttttaattttttttttttttttaatagagacagggccaGGCTGGTTAAGAACTCTTGAccatgccaggcgcggtggctcacg i papAnu2.chr19 C 0 I 1439 s chlSab2.chr6 46755815 90 + 50890351 tcttcttcctttttaattttttttttttttt--ATAGAGACAGGGCCAGGCTGGTTAAGAACTCTTGACCATgccaggcgcagtggctcacg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19537553 344 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e panTro4.chr19 58985334 25 + 63644993 I a score=5865.000000 s hg38.chr19_GL949747v2_alt 51502 4 + 729520 cctg s ponAbe2.chr19 55855108 4 + 60714840 cctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59907023 4 + 64156825 cctg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54925360 4 + 59248254 cctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47044538 4 + 51301725 cctg i papAnu2.chr19 I 1439 C 0 s chlSab2.chr6 46755905 4 + 50890351 cctg i chlSab2.chr6 C 0 I 841 e canFam3.chr1 19537553 344 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e panTro4.chr19 58985334 25 + 63644993 I a score=19920.000000 s hg38.chr19_GL949747v2_alt 51506 14 + 729520 taatcccagcactt s ponAbe2.chr19 55855112 14 + 60714840 taatcccagcactt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59907027 14 + 64156825 taatcccagcactt i rheMac3.chr19 C 0 I 1595 s macFas5.chr19 54925364 14 + 59248254 taatcccagcactt i macFas5.chr19 C 0 I 2559 s papAnu2.chr19 47044542 14 + 51301725 taatcccagcactt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46756750 14 + 50890351 taatcccagcactt i chlSab2.chr6 I 841 C 0 e canFam3.chr1 19537553 344 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e panTro4.chr19 58985334 25 + 63644993 I a score=88532.000000 s hg38.chr19_GL949747v2_alt 51520 68 + 729520 tgggaggccgaggcaggtggatcacgaggtcaggagttgaagaccagcctggccaacatggtgaaacc s ponAbe2.chr19 55855126 68 + 60714840 tcggaggccgaggcgggtggatcacgaggtcaggagttcaagaccagcctggccaacatggtgaaacc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59908636 68 + 64156825 tgggaggccgaggcaggtggatcacaaggtcaggaattcaagacaagcctggccaacagggtgaaacc i rheMac3.chr19 I 1595 C 0 s macFas5.chr19 54927937 68 + 59248254 tgggaggccgaggcaggtggatcacaaggtcaggaattcaagacaagcctggccaacagggtgaaacc i macFas5.chr19 I 2559 C 0 s papAnu2.chr19 47044556 68 + 51301725 tgggaggccgaggcaggtggatcacgagatcaggagctcaagaccagcctggccaacatggtgaaacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46756764 68 + 50890351 tgggaggccgaggcaggtggatcacgaggtcaggagttcaagacaagcctggccaacatggtgaaacc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19537553 344 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e panTro4.chr19 58985334 25 + 63644993 I a score=30937.000000 s hg38.chr19_GL949747v2_alt 51588 17 + 729520 ccgtctatactaaaaat s ponAbe2.chr19 55855194 17 + 60714840 ctgtctctactaaaaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102620799 17 - 106955855 ccgtctctactaaaaat i nomLeu3.chr10 I 608 C 0 s rheMac3.chr19 59908704 17 + 64156825 ctgtctctactaaaaat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54928005 17 + 59248254 ctgtctctactaaaaat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47044624 17 + 51301725 ctgtctctactaaaaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46756832 17 + 50890351 ctgtctctactaaaaat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19537553 344 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e panTro4.chr19 58985334 25 + 63644993 I a score=351569.000000 s hg38.chr19_GL949747v2_alt 51605 174 + 729520 acaaaaattagcca-ggtgtggtgatgggcgcctgtgatcccagctactcaggaggctgaggcagagaatcgcttgaacccaggaggcagagtttgcaatgagctgagatcgcaccactgcactccagcctggccacagcgcgagactcagtttcaggaaagaaaaaaaaa----agag s panTro4.chr19 58985359 173 + 63644993 acaaaaattagcca-ggcgtggtgatggccgcctgtgatcccagctactgaggaggctgaggcagagaatcacttgaacccaggaggcagaggttgcaatgagctgagatcgcgccactgcactccagcctggccacagtgcgagactcagtttcaggaaagaaaaaaaaa-----gag i panTro4.chr19 I 25 C 0 s ponAbe2.chr19 55855211 176 + 60714840 acaaaaattagcca-ggcgtggtgatgggcgcctgtaatcccagctactcaggagcctgaggcagagaatcgcttgaacccaggaggcagaggttgcaatgagctgagatagcaccactgcactccatcctggcgacagcacgagactcagtctcaggaaagaaaaaaaaa-aa-agag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102620816 178 - 106955855 acaaatattagccagggagtggtgatgagcgcctgtaatcccagctactcgggaggctgaggcagagaatcgcttgaacccaggaggcggaggttgcaatgagctgagatcgcgccactgcactccagcctggcgacagcacaagactcggtctcaggaaagaataaaaaa-aagagag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59908721 169 + 64156825 acgaaaattggcca-ggcgtggtgccgggcgcctgtagttccagctactcgggaggctgaagcagagaatcacttgaacctgggaggcagaggttgcagtgagccaagatcatgccagtgcactctagcctgtcaacacagcgagactcattctcagaaag-aaaaaaaaa-------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54928022 170 + 59248254 acgaaaattagcca-ggtgtggtgccgggcgcctgtagttccagctactcgggaggctgaagcagagaatcacttgaacctgggaggcagaggttgcagtgagccaagatcatgccagtgcactctagcctggcaacacagcgagactcagtctcagaaagaaaaaaaaaa-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47044641 170 + 51301725 acgaaaattagcca-ggtgtggtgacgggcgcctgtcattccagctactcgggaggctaaagcagagaatcacttgaacccgggaggcagaggttgcagtgagccaagatcatgccagtgcactctagcctggcaacaaagcgagactcagtctcagaaagaaaaaaaaag-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46756849 178 + 50890351 acgaaaattagcca-ggtgtggtgactggcgcctgtagttccagctactcgggaggctgaagcagagaatcacttgaacccgagaggcagaggttgcagtgagccaagatcatgccagtgcactctagcctggcaacagagcgagactcagtctcagaaagaaaaaaaaaaaaagaaag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19537553 344 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=644422.000000 s hg38.chr19_GL949747v2_alt 51779 243 + 729520 aaagaaaaGAAAAAACATAATATCAAGCCTGTTTATGAACATTATCATAATAATGAGATTGATCTAACTCAAAGAAAGTTAGTTAGGCCTGTGTCTCTGAGAGA----TTTCCTCTTTTTCC------CCTGTGT-----GAACAGTTTTAGGTCTCAGCAG-GAAAAA-GGAGAAGTTACCAGGCGTTTGTGCTACTATTACATCCATGAGCCAATCCATAAACTGACACTTCAAGTTTTGCAAAAGGAAATTGTGaac s panTro4.chr19 58985532 243 + 63644993 aaagaaaagaaAAAACATAATATCAAGCCTGTTTATGAACATTATCATAATAATGAGATTGATCTAACTCAAAGAAAGTTAGTTAGGCCTGTATCTCTGAGAGA----TTTCCTCTTTTTCC------CCTGTGT-----AAACAGTTTTAGGTCTCAGCAG-GAAAAA-GGGGAAGTTACCAGGCGTTTGTCCTACTATTACATCCATGAGCCAATCCATAAACTGACACTTCAAGTTTTGCAAAAGGAAATTGTGaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55855387 239 + 60714840 aaagaaaaGAAAAAACATAATATCAAGCCTGTTTATGAACATTATCATAATAATGAGATTGATCTAACTCAAAGAAAGTTAGC----CCTGTGTCTCTGAGAGA----TTTCCTCTTTTTCC------CCTGTAT-----GAACAGTTTTATGTCTCAGCAG-GAAAAA-GGGGAAGTTACCAGGCGTTTGTGCTAGTATTGCATCCATGAGCCAATCCATAAACTGACACTTCAAGTTTTGCAAAAGGAAATTGTGaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102620994 243 - 106955855 aaagaaaAGAAAAAACATAATATCAAGCCTGTTTATGAACATTATCATAATAGTGAGATTGATCTAACCCAAAGAAAGTTAGTTAGGCCAGTGTGTCTGACAGA----TTGCCTCTTTTCCC------CCTGTAT-----GAACAGTTTTATGTGTCAGCAG-GAAAAA-AGGGAAGTTACCAGGCGTTTGTGCTACTATTGCATCCATGAGCCAATCCATAAACTGACACTTCAAGTTTTGCAAAAGGAAATTGTGaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59908890 244 + 64156825 aaagaagagaaaaaaCATAATATCAAGCCTGTTTATGGACATTATCATAATAATGGCATTGCTCTAACTCAAAGAAAGTTAGTTAGGCCTGTGTCTCTGAGAGA----TTTCCTCTTTTTCC------CCTGTAT-----GAACAGTTTTATGTCTCAGTAG-GAAGAAGGGGGAAGTTACCAGGCGTTTGTGCTACTATTGCATCCATGAGCCAATGCATAAACTGACATTTCAAGTTTTGCAAAAGGAAATTGTGAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54928192 243 + 59248254 aaagaagagaaaaaACATAATATCAAGCCTGTTTATGAACATTATCATAATAATGACATTGCTCTAACTCAAAGAAAGTTAGTTAGGCCTGTGTCTCTGAGAGA----TTTCCTCTTTTTCC------CCTGTAT-----GAACAGTTTTATGTCTCAGTAG-GAAGAA-GGGGAAGTTACCAGGCGTTTGTGCTACTATTGCATCCATGAGCCAATGCATAAACTGACATTTCAAGTTTTGCAAAAGGAAATTGTGaac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47044811 243 + 51301725 aaagaagagaaaaaacataatATCAAGCCTGTTTATGAACATTATCATAATAATGACATTGATCTAACTCAAAGAAAGTTAGTTAGGCCTGTGTCTCTGAgaga----tttcctctttttcc------cctGTAT-----GAACAGTTTTATGTTTCAGTAG-GAAGGA-GGGGAAGTTACCAGGCATTTGTGCTACTATTGCATCCACGAGCCAGTGCATAAACTGACATTTCAAGTTTTGCAAAAGGAAACTGTGAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46757027 243 + 50890351 aaagaagagaaaaaacatAATATCAAGCCTGTTTATGAACATTATCATAATAATGACATTGATCTAACTCAAAGAAAGTTAGTTAGGCCTGTGTCTCTGAGAGA----TTTCCTCTTTTTCC------CCTGTAG-----GAACCGTTTTATGTCTCAGTAG-GAAGAA-GGGGAAGTTACCAGGCGTTTGTGCTACTATTGCATCCATAAGCCAGTGCATAAACTGACATTTCAAGTTTTGCAAAAGGAAATTGTGaac i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19537897 254 - 122678785 TAAGATCTCTTTAAAAATAACATCAAGCCTGCTTACAGAATTTATTGGAAGAGAGAGATTGTTCTAACTCAGCAGATACTGGTTGGACCTGTGTTTCTAAGAGATTTGTTTACTCTTTTTCCTTTTTGCCTATGTTAATGGAACAGTTTTGTGTCTTAGTAGTGAAGAG-GGAAAAGTTACCAGGCCTTTGTGCTAAAAT----TCCATGGG-CACTCCAAAATATTACGTTGCACGGTTTGCAAAAGGCAAGTGATAac i canFam3.chr1 I 344 I 2530 e calJac3.chr22 45321063 9366 + 49145316 I a score=152889.000000 s hg38.chr19_GL949747v2_alt 52022 73 + 729520 acccaaaatgttcaaacaacgtaagtgtccatccatggaagaatggataaacacagtgtgctctatatattca s panTro4.chr19 58985775 73 + 63644993 acccaaaatgttcaaacaacgtaagtgtccatccgtggaagaatggataaacacagtgtgctctatatattca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55855626 73 + 60714840 acccgaaaggttcaaacaacgtaagtgtccatccatggaagaatgcataaacacagtgtgctctatacattca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102621237 73 - 106955855 acccgaaaggttcaaacaacataagtgtccatccatggaaaaatggataagcacagtgtgctctatacattca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59909134 70 + 64156825 GCTCAAAAGGTTCAAACA---TAAGTGTCCATCCATGGCATGATGGACAAACACAGTGTGCTCCATATATTCA i rheMac3.chr19 C 0 I 3434 s macFas5.chr19 54928435 70 + 59248254 actcaaaaggttcaaaca---taagtgtccatccatggcatgatggataaacatagtgtgctccatatattca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47045054 70 + 51301725 ACCCAAAAGGTTCAAACA---TAAGTGTCCATccatggaagaatggataaacataGTGTGCTCCATATAttca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46757270 70 + 50890351 acccaaaaggttcaaaca---taagtgtccatctatggcagaatggataaacatagtgtactccatatattca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=30061.000000 s hg38.chr19_GL949747v2_alt 52095 22 + 729520 atgggattttTCTTCtttttct s panTro4.chr19 58985848 22 + 63644993 atgggattttTCTTCtttttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55855699 22 + 60714840 atgggatttttttTCtttttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102621310 22 - 106955855 atgggatttttttTCTTTTTCT i nomLeu3.chr10 C 0 I 47 s macFas5.chr19 54928505 15 + 59248254 acgggattttttctt------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47045124 22 + 51301725 atgagatttttttttcttttct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46757340 22 + 50890351 atgggattttttttctttttct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=45251.000000 s hg38.chr19_GL949747v2_alt 52117 46 + 729520 tc-gttt-tttttttttttttttttgagacatagtttcattcttgttg s panTro4.chr19 58985870 46 + 63644993 tc-gttt-tttttttttttttttttgagacatagtttcattcttgttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55855721 47 + 60714840 tcggttt-tgttttcttttttttttgagacatagtttcattcttgttg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54928520 40 + 59248254 --------ttcttttttttttttctgagacagagtttcgctcttgttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47045146 44 + 51301725 ---tttc-tttttttttttttttctgagacagagtttcgctcttgttg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46757362 45 + 50890351 ---tttcttttttttttttttttctgagacagagtttcgctcttgttg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102621332 47 - 106955855 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=186645.000000 s hg38.chr19_GL949747v2_alt 52163 103 + 729520 cccaggctggagtgcaatggcgcgatctcggctcactgcaacctccgcctcgcgggttcaagtgattctcctgcctcagcctcccaagtagctgggattacag s panTro4.chr19 58985916 103 + 63644993 cccaggctggagtgcaatggcgcgatctcggctcactgcaatctctgcctcacgggttcaagtgattctcctgcctcagcctcccaagtagctgggattacag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55855768 103 + 60714840 cccaggctggagtgcagtggcatgatctcagctcactgcaacctctgcctcatggattcaagtgattcttgtgcctcagcctcccaagtagctgggattacag i ponAbe2.chr19 C 0 I 7657 s nomLeu3.chr10 102621379 103 - 106955855 cccaggctggagtgcagtggcgcggtcttagctcaccacaacctctgcctcacgggttcaagtgattctcctgcctcagcctcccaagtagctgggattacag i nomLeu3.chr10 I 47 I 89 s macFas5.chr19 54928560 103 + 59248254 tccaggctggagtgcaatggcgcgatcttggctcactgcaacctccgcctcgcgggttcaagtgattctcctgcctcagcctcctgagtagctgggattacag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47045190 103 + 51301725 tccaggctggagggcaatggcgcgatcttggctcactgcaacctccgcctcgcgggttcaagtgattctcctgcctcagcctcctgagtagctgggattacag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46757407 103 + 50890351 tccaggctggagtgcaatggcgcgatcttggctcactgcaacctccacctcgcgggttcaagtgattctcctgcctcagcctcctaagtagctgggattacag i chlSab2.chr6 C 0 I 3292 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=2980.000000 s hg38.chr19_GL949747v2_alt 52266 18 + 729520 ctcac-tgcaacctccgcc s panTro4.chr19 58986019 18 + 63644993 ctcac-tgcaacctctgcc i panTro4.chr19 C 0 C 0 s macFas5.chr19 54928663 18 + 59248254 -gcatgcgccaacacagcc i macFas5.chr19 C 0 I 8 s papAnu2.chr19 47045293 18 + 51301725 -gcatgtgccaacacagcc i papAnu2.chr19 C 0 I 83 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102621482 89 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=2969.000000 s hg38.chr19_GL949747v2_alt 52284 37 + 729520 ttgcaggttcaagtgattctcct---------------------------gcctcagcctcccA s panTro4.chr19 58986037 37 + 63644993 tcgcaggttcaagtgattctcct---------------------------gcctcagcctcccA i panTro4.chr19 C 0 C 0 s macFas5.chr19 54928689 64 + 59248254 ttgtgggtttttttgttttttttgtttttttgttttttttttgagacagagtcttgctctctca i macFas5.chr19 I 8 I 15 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102621482 89 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47045311 83 + 51301725 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=14017.000000 s hg38.chr19_GL949747v2_alt 52321 43 + 729520 agtagctgggattacagctcactgcaa---cctccgccttgtgggt s panTro4.chr19 58986074 43 + 63644993 agtagctgggattacagctcactgcaa---cctccgccttgtgggt i panTro4.chr19 C 0 C 0 s macFas5.chr19 54928768 45 + 59248254 agtggc-atgatctccactcactgcaaactccaccgccttctgggt i macFas5.chr19 I 15 C 0 s papAnu2.chr19 47045394 45 + 51301725 agtggc-gtgatctccactcactgcaaactccaccgcctcccgggt i papAnu2.chr19 I 83 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102621482 89 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=71112.000000 s hg38.chr19_GL949747v2_alt 52364 170 + 729520 tcaagtgattctcctgcctcagcctcccaagtagctgggattacaggcatgcaccaccatgcccagctaattttgt----attttttagtagagacagggtttcaccatgttggtcaggctgg------------------------------tcttgaactcccc-acctcaggtgatccgcccatcttagcct-ccaaaat---------------------------------gct s panTro4.chr19 58986117 170 + 63644993 tcaagtgattctcctgcctcagcctcccaagtagctgggattacaggcatgcaccaccatgcccagctaattttgt----attttttagtagagacagggtttcaccatgttggtcaggctgg------------------------------tcttgaactcccc-acctcaggtgatccgcccaccttagccc-ccaaagt---------------------------------gct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102621571 221 - 106955855 tcaggtgatccgcccacctcagcctcccaaagtgct-------------TTTTTCTTTTTCTTTTCTTCCtttttt----tttttttttttgagacagggtctcactctgctgcccaggctggagtgcaatgatgtgatcctagttcactccagcatcaacgccccgggctcaagtgatcctcccacctctgcct-cccgagtagctggcactacaggtgcacaccaccatgcccagcT i nomLeu3.chr10 I 89 C 0 s macFas5.chr19 54928813 173 + 59248254 tcacaccattctcctgccccagcctccctagaaactgggactacaggcgcccaccaccacacctggctaatttttttgtgtgtttttagtagacacggggtttcaccgtttttgccaggatgg------------------------------tctcgatctcctg-acctc--gtgatccacccgccttggcctcccaaagt---------------------------------gct i macFas5.chr19 C 0 I 31 s papAnu2.chr19 47045439 173 + 51301725 tcacgccattctcctgcctcagcctccctagaaactgggactacaggcgcccaccaccacacctggctaatttttgtgggtgtttttagtagagacggggtttcaccgtttttgccaggatgg------------------------------tctcgatctcctg-acctc--gtgatccgcccaccttggcctcccgaagt---------------------------------gct i papAnu2.chr19 C 0 I 31 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=2512.000000 s hg38.chr19_GL949747v2_alt 52534 26 + 729520 tttttctttttcttttctttctttct s panTro4.chr19 58986287 25 + 63644993 TTTTTCTTTTTCTTTTCtttctttc- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102621792 25 - 106955855 CATTGTTTTTTGTTGTTGttgtttt- i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47045612 31 + 51301725 I e macFas5.chr19 54928986 31 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=25587.000000 s hg38.chr19_GL949747v2_alt 52560 53 + 729520 tttttttttttttttttttttgaggcagggtctcgctc-tgctgcccaggctgg s panTro4.chr19 58986312 52 + 63644993 -ttttttttttttttttttttgaggcagggtctcgctc-tgctgcccaggctgg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102621817 54 - 106955855 taatatttatttatttattttgagatggagtttcgctcttgttgcccagactgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54929017 53 + 59248254 ctaattttgtattttttagtagagacagggtttcacca-tgttggtcaggctgg i macFas5.chr19 I 31 I 5 s papAnu2.chr19 47045643 53 + 51301725 ctaattttatattttttagtagagacagggtttcacca-tgttggtcaggctgg i papAnu2.chr19 I 31 I 5 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=5943.000000 s hg38.chr19_GL949747v2_alt 52613 35 + 729520 agtgcaatgatgtgatcctagttcattccagcatc s panTro4.chr19 58986364 35 + 63644993 agtgcaatgatgtgatcctagttcactccagcatc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102621871 35 - 106955855 agtgcaatggcacaatctccgctcactgcaacccc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47045696 5 + 51301725 I e macFas5.chr19 54929070 5 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=68009.000000 s hg38.chr19_GL949747v2_alt 52648 158 + 729520 aactccctgggctcaggtgatcctcccacctctgcctcccgagtagctgggactacagctgcacaccaccatgcccagctcatttttgttgttgttgttgtttttaatatttatttatttattttgagatggagtttcgctcttgttgcccagactgg s panTro4.chr19 58986399 158 + 63644993 aactccctgggctcaggtgatcctcccacctctgcctcccgagtagctgggattacagctgcacaccaccatgcccagctcatttttgttgttgttgttgtttttaatatttatttatttattttgagatggagtttcgctcttgttgcccagactgg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102621906 131 - 106955855 tgcctcccgggttcaagcgattctcctgcctcagcctcccaagtacctgggattacaggcacctgccaccacgcctggctaattttta----------tatttttaata----------------gaaatggggtttcac-cctattggccaaactgg i nomLeu3.chr10 C 0 I 1486 s macFas5.chr19 54929075 148 + 59248254 aactcccc-acctcaggtgatcagcccacctcggcctcccaaagtgctgggattacagctgtgagccaccgcgcctggccTTTTCTT-------tttttcttttctttctttcttttta-tttttgagacagggtttcac-tctgctgcccaggctgg i macFas5.chr19 I 5 C 0 s papAnu2.chr19 47045701 149 + 51301725 aactcccc-acctcaggtgatcagcccacctcagcctcccaaagtgctgggattacagctgtaagccaccgcacccggccttttttc-------tttttcttttctttctttctttttattttttgagacagggtctcac-tctgctgcccaggctgg i papAnu2.chr19 I 5 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=63814.000000 s hg38.chr19_GL949747v2_alt 52806 164 + 729520 agtgcaatggcatgatctcggctcactgcaacctctgactcctgggttcaagcgattctcttgcctcagcctcccaagtagctgggattacaggcgcccgccaccacgcatggctaatttt--------tatatttttag------------tagaaatggggtttcac-cctattggccaggct s panTro4.chr19 58986557 164 + 63644993 agtgcaatggcatgatctcggctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggcgcccgccaccacgcatggctaatttt--------tatatttttag------------tagagatggggtttcac-cctattggccaggct i panTro4.chr19 C 0 C 0 s macFas5.chr19 54929223 185 + 59248254 agtgcaatgatgtgatcctagttcactccagcctcaactccctgggctcaagtgatccttccacctcggcctcctgattagctgggacgacaggtgcacaccaccatgcccagctcatttttttgtttgtttgtttttaatatttatttatttagagatggagtttcgctcttgttgcccaggct i macFas5.chr19 C 0 I 82 s papAnu2.chr19 47045850 185 + 51301725 agtgcaatgatgtgatcctagttcactccagcctcaactccctgggctcaagtgatccttccacctcagcctcccaattagctgggacgacaggtgcacaccaccatgcccagctcatttttttgtttgtttgtttttaatatttatttatttagagatggagtttcgctcttgttgcccaggct i papAnu2.chr19 C 0 I 82 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102622037 1486 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=3693.000000 s hg38.chr19_GL949747v2_alt 52970 39 + 729520 gttctcgaactccttacgtcaggtcattgcaaaaaaagt s panTro4.chr19 58986721 39 + 63644993 gttctcgaactccttacgtcaggtcattgcaaaaaaagt i panTro4.chr19 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102622037 1486 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47046035 82 + 51301725 I e macFas5.chr19 54929408 82 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=55411.000000 s hg38.chr19_GL949747v2_alt 53009 172 + 729520 gctgggattacaggcgtgagccaccatgcccagcctcatttttgta-ttttttgtagagacagggtttcaccatgttgcccaggctagtctcgaactcctgggctcaagcgatctgcctgcctcagactctcaaagtgctgggattacaggtgtgagacactgtgctcggcct s panTro4.chr19 58986760 172 + 63644993 ggtgggattacaggcgtgagccaccatgcccagcctcattttttaa-ttttttgtagagacagggtttcaccatgttgcccaggctagtctcgaactcctgggctcaagcgatctgcctgcctcagactctcaaagtgctgggattacaggtgtgagacattgtgctcggGCt i panTro4.chr19 C 0 C 0 s macFas5.chr19 54929490 152 + 59248254 gctgggattacaggcgcccgccaccacgcctgg-ctaatttttgta-tttttagtagagatggggtttcacccta-----caggctggtctcaaactccttacatcaggtcat-----tgc---------aaaaagtgctgggattacaggcgtgagtcaccgtgcccagtct i macFas5.chr19 I 82 I 1977 s papAnu2.chr19 47046117 154 + 51301725 gctgggattacaggcacccgcctccacgcctgg-ctaatttttgtattttttagtagagatggggtttcacccta-----cagactggtctcaaactccttacatCAGGTCAT-----Tgc--------aaaaaagtgctgggattacaggcgtgagtcaccgtgcccagtct i papAnu2.chr19 I 82 I 2062 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102622037 1486 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=56751.000000 s hg38.chr19_GL949747v2_alt 53181 632 + 729520 acagtgggattttagccataaaaaggaaaggaaatctgacatatcctacaatatagatgtagctcgaggatattatgctgagtaaactaagtcaggcaaaaaagaacaagtgttatgattccactcatacatcctagaataagcaaattcatagagataaaaattagaatgggctggacacggtggctcacgcctgtaatcccagcactttgggaggccgagacaggcagatcacaaagtcaggagatcgagaccagcctggtcaacatggtgaaaccttgtctctactaaaaaaaaaaaaaaaaaaaacttagccaggcatggtggtgagcgccagtgatcccagctactcgggagggagaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagattaggccactgtactccagcctgggtgacgaagcaagactccatctccgaaaaaaaaaaaaaaaaaaagaaattagaatggaggttaccaggggctgggaggaccgcggcaaatacagagttattggttagagggtgtagcgttcatattgggaattgtgattgttaatttgatttatcagctagaccaggccacaggatgctgggatatctggttaaac s panTro4.chr19 58986932 624 + 63644993 acagtgggattttagccataaaaaagaaaggaaatctgacatatcctacaatatagatgtagctcgaggatattatgctgagtaaactaagtcaggcacaaaagaacaagtgttatgattccactcatacatcctagaataagcaaattcatacagataaaaattagaatgggctggacacggtggctcacgcctgtaatcccagcactttgggaggccgagacaggcagatcacaaagtcaggagatcgagaccagcctggccaacatggtgaaaccttgtctctact---aaaaaaaaaaaaaaaaacttagccaggcatggtggtgagcgccagtgatcccagctactcgggagggagaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagattaggccactgtactccagcctgggtgacgaagcaagactccatctccg----aaaaaaaaaaaaaaagaaattagaatggaggttaccaggggctgggaggaccgcggcaaatagagagttattggttagagggtgtagagttcatattgggaattgtgattgttaatttgatttatcagctagaccaggccacaggatgctggg-tatctggttaaac i panTro4.chr19 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102622037 1486 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47046271 2062 + 51301725 I e macFas5.chr19 54929642 1977 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=37464.000000 s hg38.chr19_GL949747v2_alt 53813 145 + 729520 attatttctgggcgtgtctgtgagggtgtttttagaaagatcagcatttgaatctaatgctgagtcgggcaggttgg-ccttcctaatggaggtgggtattctgctgagggccaggatgggagaaaaaggtggCAGAGCCACcaca s panTro4.chr19 58987556 145 + 63644993 attatttctgggcgtgtctgtgagggcgtttttagagagatcagcatttgaatctaatgctgagtcgggcaggttgg-ccttcctaatggaggtgggtattctgctgagggccaggatgggagaaaaaggtggCAGAGCCACcaca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102623523 145 - 106955855 attatttctgggtgtgtctgtg-gggtgtttttagagagatcagcgtttgaatccaatgctgagtcgggcaggttggcccttcctaatggaggtgggcattctgctgaaggccaggatgggagaaaaaggtggaagaGCCACcaca i nomLeu3.chr10 I 1486 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47046271 2062 + 51301725 I e macFas5.chr19 54929642 1977 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=56020.000000 s hg38.chr19_GL949747v2_alt 53958 100 + 729520 gtggctcacgcctgtaatcccagcactttgggaggccaaggcagaagggctgcttgaggccaggagtttgagaccagcctgagtaacatagtgagatccc s panTro4.chr19 58987701 100 + 63644993 gtggctcacgcctgtaatcccagcactttgggaggccaaggcagaagggctgcttgaggccaggagtttgagaccagcctgagtaacatagtgagatccc i panTro4.chr19 C 0 I 136 s ponAbe2.chr19 55863528 100 + 60714840 gtggctcacgcctgtaatctcagcactttgggaggccaaggcagaagggctgcttgaggccaggagttcgagaccagcctgagtaacatagtgagatccc i ponAbe2.chr19 I 7657 C 0 s nomLeu3.chr10 102623668 100 - 106955855 gtggcttatgcctgtaatcccagcactttgggaggccaaggcagaagggctgcttgaggccaggagttcgagaccagcctgagtaacatagtgagatccc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47046271 2062 + 51301725 I e macFas5.chr19 54929642 1977 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=210134.000000 s hg38.chr19_GL949747v2_alt 54058 547 + 729520 gtctctacaaaaaatttaaaaattaCACGgggcactgtggctcacgcctgtaatcccagcactttgggaggctgaggctgaggcgggcagatcacctgaggtgatcacctgagggagctcaagaccagcctggccaacatgatgaaaccccgtctctactaaaaagtacaaaaaatcagccgggtgtgtggtgggcacctgtaatctcagctacccaggaggctgaggcaggagaattgcttgagcccaggaggtggaggctgcagtgagctgtggtcataccactgcactccagcctgggtacagagtgagactttgtctcaaaaaaaggaaaaggagggaaggaaggaaggaagtaaggaaggaaggaaggaagggaaagagagagaggaaggaaggaatgaaggagaaagagaaagaaagaaaggaaggaaggaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagcaagcaagcaagcaagcaggcaagcaagcgggggctcacg s panTro4.chr19 58987937 464 + 63644993 gtctctacaaaaaatttaaaaaTTACACGgggcactgtggctcacgcctgtaatcccagcactttgggaggctgaggctgaggcgggcagatcacctgaggtgatcacctgagggagctcaagaccagcctggccaacatgatgaaaccccgtctctactaaaaagtacaaaaaatcagccgggtgtgtggcgggcacctgtaatcccagctacccgggaggctgaggcaggagaattgcttgagcccaggaggtggaggctgcagtgagctgtggtcataccactgcactccagcctgggtacagagtgagactttgtctcaaaaaaaggaaaGgga------------------------aggaaggaaggaagggaaagagagagaggaaggaaggaatgaaggagagagag------------gaaggaaggaat-----------------------------------------------gaaagaaaggaaggaaggaaggaaggaaggaaggaagcaggcaagcaagcgggggctcacg i panTro4.chr19 I 136 C 0 s ponAbe2.chr19 55863628 458 + 60714840 atctctacaaaaaatttaaaaattacacgggGCAGTgtggctcacgcctgtaatcccagcactttgggaggctgaggctgaggcgggcagatcacctgaggtgatcacctgagggagctcaagaccagcctggccaacatgatgaaaccccgtctttactaaaaagtacaaaaaatcagccaggtgtgtggggggcacctgtaatcccaactacccgggaggctgaggcaggagaattgcttgagcccgggaggtggaggctgcagtgagctgtggtcatatcactgcactccagcctgggtacagagtgagaccttgtctcaaaaaaaGGAgagggaaggaaggaagga------------aggaaagaaggaagggaaagagagacaggaaggaaggaatgaaggagaaaga-------------gaaagaaggaaa-----------------------------------------------aagaaaaagaaagaaagaaagggaa-----------------aagcaagcaggggctcacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102623768 439 - 106955855 gtctctacaaaaaatttaaaaattaCACGgggcactgtggctcatgcctgtaatcccagcactttgggaggctgaggctgaggcaggcagatcacctgaggtgatcacctgagggagctcaagaccagcctggccaacatgatgaaaccccgtctctaataaaaagtacaaaaaatcagcagggtgtgtggtgggcacctgtaatcccagctacccgggaggctgaggcaggagaattgcttgagcctgggaggtggaggctgcagtgagctgtggtcataccactgtactccagcctgggtacagagttagaccttgtctcaaaaaaaggaaagggaaggaaggaagga------------aggaaggaaggaagg------aaggaaggaaggaagg---gagggagggaggg------------aagggaaggaaa-----------------------------------------------gagagagaggaaggaaggaatgaag-----------------gaGAAAGA----------- i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47046271 2062 + 51301725 I e macFas5.chr19 54929642 1977 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=195365.000000 s hg38.chr19_GL949747v2_alt 54605 357 + 729520 cctgtaatcccagcactttgggaggccgaggcgggcagatcaa--gaagtcaggagatggagaccatcctggctaacacagtgaaac-------ctacgaaaaa---------------agccgggcatggtggcgggcgcctgtagtcccagctactcgggagg--ctgaggcaggagaatggcgtgaacccgggag-gcggagcttgcagtgagcagagatcgcacc-actgcactccagcctgggcgacagagcgagactccatctcaaaaaaa------------aaaaaaagaaagaaagagagagagag---------gaaggaagggaggaaggaaggaaggaaggaaggaaggaagg--------------------------------------------------aagggaaggagaaaaagaaagaaaggaaggaaggaag-----------------------------------gaag s panTro4.chr19 58988401 336 + 63644993 cctgtaatcccagcactttgggaggccgaggcgggcagatcaa--gaagtcaggagatggagaccatcctggctaacacagtgaaac-------ctacgaaaaa---------------agccgggcatggtggcgggcgcctgtagtcccagctactcgggagg--ctgaggcaggagaatggcgtgaacccgggag-gcggagcttgcagtgagccgagatcgcacc-actgcactccagcctgggcgacagagtgagactccgtctcaaaaaaa------------aaaaaaa-aaagaaataaagaaagag---------------agagag----------aggaaggaaggaaggaagg--------------------------------------------------aaggaaaggagaaaaagaaagaaaggaaggaaggaag--------------------------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864086 394 + 60714840 cctgtaataccagcactttgggaggccaaggcgga-ggatcac--gaggtcaggagattgagaccatcctggctaacacggtgaaac-------ctacgaaaaa-----tacaaaagttagccgggcatggtggcaggcgcctgtagtcccagctacttgggagg--ctgaggcaggagaatggcatgaagctgggag-gcggagcttgcagtgagctgagatcgtgccaactgcactcccacctgggggacagagcgagactccataaaaaaaaaa------------aaaaaaagaaataaagaaagagagag-------aggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagg----------------agggaaggaaaaaagaaggaaaga---------aaaggaaagaaggaaagaaaagaaagaaaagaaagaaa-----------------------------------gaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102624207 443 - 106955855 -----AAAAccagcactttgggaggccaaggcgggcgaatcac--gaggtcaggagatcgagaccatcctggctaacacagtgaaac-------ctatgaaaaa-----tacaaaagttagccaggcatggtggcaggcgcctgtagtcctagctacttgggagg--ctgaggcaggagaatggcgtgaacctgggag-gcggaacttgcagtgagctgagatcgtgccaatggcactccagcctgggggacagagcgagaatctat-----aaaaa------------aaagaaagaaagaaagaaagagagag-------aggaaggaaggaaggaaggaaggaaggaaggaaggagaaaaga-gagatagagat-gaaagaaagaaagaaaagaaagaaagaaaaagaaagaaagaaaaaaagaaaaagaaagaaaagaaagaaagaaaaagaaagaaaaaaagaaaaagaaagaaagaaaaagaaag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54931619 449 + 59248254 cctgtaatcccagcactttgagaggcagaggcaggtggatcacttaagcccaggagtttgagtctagcctgggcaacatagcaagaccctgtctctacaaagaaaaaaataccaaacttagccaggcatggtagcatgtgcttataaccccacctacttagcagggactgaggca-gaggattgcctgagcccgggggagtgaaggctgcagtgagctgtggtcatgcc-actgcattccagcctgggtgacagagtgagaccttgtctcaagaaaaggaaagggaaggaagaaaGgaaggaaggagagagagagagagaaaagaaagaaagagaaaaagagaaagagagagagaggaaggaaggagaaagagagagagagagagaaagaaaaagaaaagaaagaaagaaaaagaaagaaagagagaaagaaagagaaagaaagaaaaaga---------------------------------------- i macFas5.chr19 I 1977 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47046271 2062 + 51301725 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=6413.000000 s hg38.chr19_GL949747v2_alt 54962 10 + 729520 aaagaaag--------------ag s panTro4.chr19 58988737 10 + 63644993 AAAGAAAG--------------AG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864480 10 + 60714840 gaaaggag--------------ag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102624650 24 - 106955855 aaagaaagaaaaaaagaaagGAAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54932068 10 + 59248254 aaagaaaa--------------ag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46760802 10 + 50890351 aaagaaaa--------------ag i chlSab2.chr6 I 3292 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e papAnu2.chr19 47046271 2062 + 51301725 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=148730.000000 s hg38.chr19_GL949747v2_alt 54972 82 + 729520 GTTTTAGTGTAGATAGTGGTGATGGTTACACAGCGGCCTCAATTTACTTTATAGTTATCTATTTGACACTAAATTTTTATTT s panTro4.chr19 58988747 82 + 63644993 GCTTTAGTGTAGATAGTGGGGATGGTTACACAACGGCCTCAATTTACTTTATAGTTATCTATTTGACACTAAATTTTTATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864490 82 + 60714840 gttttagtatagatagtGGTGATGGTTACAAAACAGCCTCAATTTACTTTATAGTTATCTATTTGACACTAAATTTTTATTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102624674 82 - 106955855 GTTTTAGTGTAGATAGTGGTGATGGTTACACAGCAGCCTCAATTTACTTCATAGTTATCTATTTGACACTAAAttttttttt i nomLeu3.chr10 C 0 I 358 s rheMac3.chr19 59912638 82 + 64156825 gttttagtatagatagtggtgatggttacacaacaacctcaatttactttatAGTTATCTATTTGGCACTAAATTTTTATTT i rheMac3.chr19 I 3434 C 0 s macFas5.chr19 54932078 82 + 59248254 gttttagtatagatagtggtgatggttacacaacaacctcaatttactttatAGTTATCTATTTGGCACTAAATTTTTATTT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46760812 82 + 50890351 gttttagtgtagatagtggtgatggttacacaacaacctcaatttactttatAGTTATCTATTTGGCACTAAATTTTTATTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e papAnu2.chr19 47046271 2062 + 51301725 I a score=26342.000000 s hg38.chr19_GL949747v2_alt 55054 20 + 729520 ATGGTATTAAGGTTTCTGgg s panTro4.chr19 58988829 20 + 63644993 ATGGTATTAAGGTTTCTGgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864572 20 + 60714840 ATGGTATTAAGGTTTCTGgg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59912720 20 + 64156825 ATGGTGTTAGGGTTTCTGgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54932160 20 + 59248254 ATGGTGTTAGGGTTTCTGgg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46760894 20 + 50890351 ATGGTGTTAAGGTTTCTGgg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102624756 358 - 106955855 I e papAnu2.chr19 47046271 2062 + 51301725 I a score=339079.000000 s hg38.chr19_GL949747v2_alt 55074 187 + 729520 ccaggcacagtggctcacatctgtaatcccagcactttgagagactgaggtgggcagatcacctgaggtcgggagttcgagaccagcctggccaacatggtgaaa-cactgtctctactaaaaatacaaaaattaaccaggcatggtggcgcacccctgtaatccagttactcaggaggctgaagcag s panTro4.chr19 58988849 187 + 63644993 ccaggcgcagtggctcacatctgtaatcccagcactttgagagactgaggtgggcagatcacctgaggtcgggagttcgagaccagcctggccaacatggtgaaa-ccccgtctctactaaaaatacaaaaattaactaggcatggtggcgcacccctgtaatccagttactcaggaggctgaagcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864592 187 + 60714840 ccaggcgcagtggctcaggtctgtaatcccagcactttgagaggctgaggtgggaagatcacctgaagtcgggagttcgagaccagcctggccaacatggtgaaa-ctctgtctctactaaaaatacaaaaattaaccaggcatggtggcgcacccctgtaatccagttactcaggaggctgaagcag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59912740 187 + 64156825 ccaggcacagtggctcacgcctgtaatcccagtactttgggaggctgaggctggcagatcacctgaggtcaggagttcgagaccagactggccaacatggtgaaa-ccccatctctactaaaaatacaaaaattaaccaggcgtggtggtgcacccctttaatccagttactcaggaggctgaagcag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54932180 187 + 59248254 ccaggcacagtggctcacgcctgtaatcccaatactttgggaggctgaggctggcagatcacctgaggtcaggagttcgagaccagactggccaacatggtgaaa-ccccatctctactaaaaatacaaaaattaaccaggcgtggtggcgcacccctttaatccagttactcaggaggctgaagcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47048333 187 + 51301725 ccaggcacagtggctcacgcctgtaatcccagtactttgggaggctgaggctggcagatcacctgaggtcaggagttcgagaccagactggccaacatggtgaaa-ccccatctctactaaaaatacaaaaattaaccagacatggtggcacacccctttaatccagttactcaggaggctgaagcag i papAnu2.chr19 I 2062 C 0 s chlSab2.chr6 46760914 188 + 50890351 ccacgcacagtggctcacgcctgtaatcccagtactttgggaggctgaggctggcagatcacctgaggtcaggagttcgagaccagactggccaacatggtgaaacccccatctctactaaaaatacaaaaattaaccaggcatggtggcgcacccctttaatccagttactcaggaggctgaagcaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102624756 358 - 106955855 I a score=198623.000000 s hg38.chr19_GL949747v2_alt 55261 100 + 729520 gagaatcgcttgaacccgggaggcagaggttgtggtgagccgagatcatgccattgcactacagcctgggcaacaagagcaaaactctgtctcaaa--aa--aa s panTro4.chr19 58989036 100 + 63644993 gagaatcgcttgaacccaggaggcagaggttgtggtgagccgagatcacgccattgcactccagcctgggcaacaagagcaaaaccctgtctcaaa--aa--aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864779 102 + 60714840 gaggatcgcttgaacccaggagccggaggttgtggtgagccgagatcacgccattgcactccagcctgggcaacaagagcaaaaccgtgtctcaaaataa--aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102625114 96 - 106955855 gagaatcgcttgaacccgggaggcggaggttgtggtgagccgagatcatgccattgcactccagcctgggcaacaagagcaaaaccctgtctcaat-------- i nomLeu3.chr10 I 358 C 0 s rheMac3.chr19 59912927 96 + 64156825 gagaatctcttgaacccaggaggcaggggttgcagtgagttgagatcacgccactgcactccaacctgggcaagaagagtgaaaccctgcctc--a--aa---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54932367 98 + 59248254 gagaatctcttgaacccaggaggcaggggttgcagtgagttgagatcacgccactgcactccaacctgggcaagaagagtgaaaccctgcctcaaa--aa---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47048520 97 + 51301725 gagaatctcttgaacccgggaggcgggggttgcagtgagtcgagatcacgccattgcactccagcctgggcaagaagagtgaaaccctgcctc-aa--aa---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761102 100 + 50890351 gagaatctcttgaacccgggaggcgggggttgcagtgagttgagatcacgccattgcattccagcctgggcaagaagagtgaaaccctgcctcaaa--aaaa-- i chlSab2.chr6 C 0 I 14 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=34925.000000 s hg38.chr19_GL949747v2_alt 55361 25 + 729520 taaaataaaataaaataaaataaGG s panTro4.chr19 58989136 25 + 63644993 taaaataaaataaaataaaataaGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864881 25 + 60714840 taaaataaaataaaataaaataaGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102625210 24 - 106955855 -aaaataaaataaaataaaataaGg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59913023 25 + 64156825 aaaaaaaaaaaaaaaaaagataaGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54932465 25 + 59248254 aaaaaaaaaaaaaaaaaaaaaaaGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47048617 25 + 51301725 aaaaaaaaaaaaaaaaaaaaaaagg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46761202 14 + 50890351 I a score=1385178.000000 s hg38.chr19_GL949747v2_alt 55386 670 + 729520 TTTCTATTCTGAATACTTTTACTTACACACAAAAAGTCAGAGTTGATCCTGAGAAAAGG----GGTAAGCCAATGAAGC-CAGGTGGTGGAGGCATTCAGCAAAACTCACGAAGTTGAAACTACAGGAGTTGAAGTTTGCAGAGCACTCGTTTCC---AGGGAATGTCTGCACTGCACTCAGCAGGACGTCTCACTCCTCCCGTGTGC-------------TCAGTAAGCCAAAGTTGATGTTAT------TA-TTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCATGATTTTCTGCAGTCCCAGTGGATAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGGGATCATGATGGCTCCTTA------GCCCTCCCAGAGTCCGTCTTGGGTTCTGCAGTCCACAGATGGGAGAAGAGCTGGAGTCGTCGCTGCCTCTCTCCCACCCCAGAGTGTGGGCAGTAACAGCCTT-TCCTAG-CCTTTCAGTTTCCCCTCCCATATCCACATTCAGGAAACA-TGTTGATGTTGCTGATTGCAACATGCTCCTTACACACACCAGTGTTCGAGCACTTGACTCACAGGAAATGCTCCTCTGTCTCAGGCAGATTTCAGGCATCAAACAGGTAA--------CCCCGAAAATGCTTCAGACTTGGCCCTGAAGGGTTCGTATTGAAGAGATGAAAGCACTTCACtc s panTro4.chr19 58989161 669 + 63644993 TTTCTATTCTGAATACTTTTACTTACACACAAAAAG-CAGAGTTGATCCTGAGAAAAGG----GATAAGCCAATGAAGC-CAGGTGGTGGAGGCATTCAGCAAAACTCACGAAGTTGAAACTACAGGAGTTGAAGTTTGCAGAGCACTCATTTCC---AGGGAATGTCTGCAGTGCACTCAGCAGGACGTCTCACTCCTCCCGTGTGC-------------TCAGTAAGCTAAAGTTGATGTTAT------TA-TTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCATGATTTTCTGCAGTCCCAGTGGATAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGGGATCATGATGGCTCCTCA------GCCCTCCCAGAGTCCGTCTTGGGTTCTGCAGTCTACAGATGGGAGAAGAGCTGGAGTCGTCGCTGCCTCTTTCCCACCCCAGAGTGTGGGCAGTAACAGCCTT-TCCTAG-CCTTTCAGTTTCCCCTCCCATATCCACATTCAGGAAACA-TGTTGATGTTGCTGATTGCAACATGCTCCTTGCACACACCAGTGTTCGAGCACTTGACTCACAGGAAATGCTCCTCTGTCTCAGGCAGATTTCAGGCATCAAACAGGTAA--------CCCCGAAAATGCTTCAGACTTGGCCCTGAAGTGTTCGTATTGAAGAGATGAAAGCACTTCAttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864906 670 + 60714840 TTTCTATTCTGAATATTTTTACTTACATACAAAAAGTCAGAGTTGATCCTGAGAAAAGG----GGTAAGCCAATGAAGC-CAGGTGGTGGAGGCATTCAGCAAAACTCACAAAGTTGAAACTAGAGGAGTTGAAGTTTGCAGAGCACTCATTTCC---AGGGAATGTCTGCAGTGCACTCAGCAGGACGTCTCACTCCTCCCGTGTGC-------------TCAGTAAGCCAAAGTTGATGTTAT------TA-TTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCCTGATTTTCTGCAGTCCCAGTGGATAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGGGATCATGATGGCTCCTCA------GCCCTCCCAGAGTCCGTCTTGGGTTCTGCAGTCCACAGATGGGAGAAGAGCTGGAGTCGTCGCTGCCTCTCTCCCACCCCAGAGTGTGGGCAGTAACAGCCTT-TCCTAG-CCTTTCAGTTTCCCCTCCCATACCCACATTCAGGAAACA-TGTTGATGTTGCTGATTGCAACATGCTTCTTACACACACCAGTGTTCGAGCACTTGACTCACAGGAAATGCTCCTCTGTATCAGGCAGATTTCAGGTATCAAACAGGTAA--------CCCCGAAAATGCTTCAGACTTGGCCCTGAAGGGTTCGTATTGAAGAGATGAAAGCACTTCACTC i ponAbe2.chr19 C 0 I 4 s nomLeu3.chr10 102625234 671 - 106955855 tttctattctgaatacttttacttacagacaaaaagtcagagttgatcctgagaaaagg----ggtaagccaatgaagc-caggtggtggaggcattcagcaaaactcacgaagttgaaactagaggagttgaagtttgcagagcactCGTTTCC---AGGGAATGTCTGCAGTGCACTCAGCAGGACGTCTCACTCCTCCCATGTGC-------------TCAGTAAGCCAAAGTTGATGTTAT------TATTTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCATGATTCTCCGCAGTCCCAGTGGTTAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGGGATCATGATGGCTCCTCA------GGTCTCCCAGGGTCCGTCTTGGGTTCTGCAGTCCACAGATGGGAGAAGAGCTTGAGTCGTCACTGTCTCTCTCCCACCCAAGAGTGTGGGCAGTAACAGCTTT-TCCTAG-ACTTTCAGTTCCCCCTCCCATATCCACATTCAGGAAACA-TGTTGATGTTGCTGATTGCAACATGCTCCTTACACACACCAGTGTTTGAGCACTTGACTCACAGGAAATGCTCCTCTGTCTCAGGCAGATTTCAGGCATCAAACAGGTAA--------CCCCGAAAATGCTTCAGACTTGGCCCTGAAGGGTTCATATTGAAGAGATGAAAGCACTTCACtc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59913048 670 + 64156825 TTTCTATTCTGAATACTTTTACTTACACACAAAAAGTCAGAGTTTATCCTGAGAAAAGG----GGTAAGCCAATGAAGC-CAGGTGGTGGAGGCATTCAGCAAAACTCACGAAGTTGAAACCAGAGGAGTTGAAGCTTGCAGAGCGCTTGTTTCC---AGGGAGTGTCTGCAGTGCACTCAGCAGGACGTCTCACTCCTCCCGTGTTC-------------TCAGTAAGCCAAAGTTGATGTTAT------TT-TTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCATGATATTCTGCATTCCCAGTGGATAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGAGATCATGATGACTTCTCA------GCCCTCCCAGGGTCCGTCTTGGGTTCTGCAGTCCGCAGATGGGAGAAGAGCTGGAGTCGTCGCTGCCTCTCTCCCACCCCGGAGTGGAAACAGTAACAGCCTTGTCCTAG-CCTTTCAGTT-CCCCTCCCATATCCACATTCAGGAAACG-TGTTGATGTTGCTGATTGCAACATGCTCCTTACACACACCAGCGTTTGAGTATTTGACTCACAGGAAATGCTCCTCTGTCTCAGGCAGATTTCAGGCATCAAACAGGTAA--------CCCCGAAAATGCTTCAGACTTGGCCCTGAAGGGTTCGTATTGAAGAGATGAAAGCACTTCACTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54932490 670 + 59248254 TTTCTATTCTGAATACTTTTACTTACACACAAAAAGTCAGAGTTTATCCTGAGAAAAGG----GGTAAGCCAATGAAGC-CAGGTGGTGGAGGCATTCAGCAAAACTCACGAAGTTGAAACCAGAGGAGTTGAAGCTTGCAGAGCGCTTGTTTCC---AGGGAGTGTCTGCAGTGCACTCAGCAGGACGTCTCACTCCTCCCGTGTTC-------------TCAGTAAGCCAAAGTTGATGTTAT------TT-TTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCATGATATTCTGCATTCCCAGTGGATAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGAGATCATGATGACTTCTCA------GCCCTCCCAGGGTCCGTCTTGGGTTCTGCAGTCCGCAGATGGGAGAAGAGCTGGAGTCGTCCCTGCCTCTCTCCCACCCCGGAGTGGAAGCAGTAACAGCCTTGTCCTAG-CCTTTCAGTT-CCCCTCCCATATCCACATTCAGGAAACG-TGTTGGCGTTGCTGATTGCAACATGCTCCTTACACACACCAGTGTTTGAGTATTTGACTCACAGGAAATGCTCCTCTGTCTCAGGCAGATTTCAGGCATCAAACAGGTAA--------CCCCGAAAATGCTTCAGACTTGGCCCTGAAGGGTTCGTATTGAAGAGATGAAAGCACTTCACTC i macFas5.chr19 C 0 I 12 s papAnu2.chr19 47048642 670 + 51301725 tttctattCTGAATACTTTTACTTACACACAAAAAGTCAGAGTTTATCCTGAGAAAAGG----GGTAAGCCAATGAAGC-CAGGTGGTGGAGGCATTCAGCAAAACTCACGAAGTTGAAACCAGAGGAGTTGAAGCTTGCAGAGCACTTGTTTCC---AGGGAATGTCTGCAGTGCACTCAGCAGGACGTCTCACTCCTCCCGTGTTC-------------TCAGTAAGCCAAAGCTGATGTTAT------TT-TTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCGTGATATTCTGCAGTCCCAGTGGACAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGAGATCATGATGGCTTCTCA------GCCCTCCCAGGGTCCGTCTTGGGTTCTGCAGTCCACAGATGGGAGAAGAGCTGGAGTCGTCGCTGCCTCTCTCCCACCCCGGAGTGGAAGCAGTAACAGCCTTGTCCTAG-CCTTTCAGTT-CCCCTCCCATATCCACATTCAGGAAACG-TGTTGACGTTGCTGATTGCAACATGCTCCTTACACACACCAGTGTTTGAGCACTTGGCTCACAGGAAATGCTCCTCTGTCTCAGGTAGATTTCAGGCATCAAATAGGTAA--------CCCTGAAAATGCTTCAGACTTGGCCTTGAAGGATTCGTATTGAAGAGATGAAAGCACtccgctc i papAnu2.chr19 C 0 I 311 s canFam3.chr1 19540681 751 - 122678785 tttctattgtaagcacttttctttaaggaaaaaaggtt-gagtctatattaaaaacaaaacacattaagccaataaagtacaggtagcaaaggcattcagcagaaaccctgaacttggaacaagactaatcgaaatttgtaaagcaccgGCTTACATTATGTAGCATATGCATTGCACTCAGCGAGATTTCTTTTTTTTTTTTTTTTTAAGATTTCTGCAGCCGATAAACCAAAGCTGATGTTTTATTTTCTC-TTTCCATCCCCAGTCCAAATCTCTtaccctacttgatcttagccaagagacagagaagcaatACCAAACCTCTTACCAATTCTATCGTTTTCTGTGGTCCCAATGTGT-GCCCTGTGACACTTACTGAGACAGAGGAGTGGGAGTAGTTGGGAAATCATGGCAGCACGTCACTTTCTGCCTGTCCAACGCCTACTTTCAGTTCTGCAGTCCACGGGTGGGCGAGGAGCTGGGGTGGCCATGGCCTTGCCCTGAATCCACAGTGTCGA-AGTAATGATTTT-TCTCAGACTTTTCAGTTCCTCCTTCCATG-CCGCTTTCTGAAAATGTTGTTGGTGCTGCCGATTGCAACATACTCTTTG--CACACTTGGCTTCAAAGACTTGGCTCACAGAAAGTCCTCATCTGTC----ACAGATTTCAGGCATCAAATGTGTGACGCCCCCTCCCCCCAGATGCCCAAGGCTTGAGCCTGAAGAGTTCCTA-AGAGGAGATAAAGGTACCTCACTG i canFam3.chr1 I 2530 C 0 e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46761202 14 + 50890351 I a score=3008.000000 s hg38.chr19_GL949747v2_alt 56056 2 + 729520 tt s panTro4.chr19 58989830 2 + 63644993 tt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55865580 2 + 60714840 tt i ponAbe2.chr19 I 4 C 0 s nomLeu3.chr10 102625905 2 - 106955855 tt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59913718 1 + 64156825 -t i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54933172 1 + 59248254 -t i macFas5.chr19 I 12 C 0 s papAnu2.chr19 47049623 1 + 51301725 -t i papAnu2.chr19 I 311 C 0 s canFam3.chr1 19541432 2 - 122678785 TT i canFam3.chr1 C 0 I 22356 e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46761202 14 + 50890351 I a score=456377.000000 s hg38.chr19_GL949747v2_alt 56058 274 + 729520 tttttttttttt-gagatggtgtctggttctgttacctgggctggagtccagtggcacgatctcaggtcattgcaacttcagcctcctgggttcaagcaattctccggcctcagcctcccaagtagctgggattataggcgcatgccaccatgcccggctaatgtttgtatttttagttaagatgaggtttca-caagttagctgggctagtcttgaactcctcgcctcaagtgatccacctgcctcggcctcccaaactgctgggattacaggca s panTro4.chr19 58989832 275 + 63644993 tttttttttttttgagatggtgtctggttctgttacctgggctggagtccagtggcacgatctcaggtcattgcaacttcagcctcctgggttcaagcaattctccggcctcagcctcccaagtagctgggattataggcacatgccaccatgcccggctaatgtttgtatttttagttaagatgaggtttca-caagttagctgggctagtcttgaactcctcgcctcaagtgatccacctgcctcggcctcccaaactgctgggattacaggca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55865582 275 + 60714840 tttttttttttttgagatggtgtctggttctgttacccaggctggagtccagtggcacgatctcagctcattgcaacttcagcttcctgggttcaagcaattctccagcctcagcctcccaagtagctgggattataggtgcatgccaccatgcccagctaatgtttgtatttttagttaagatgaggtttca-caagttagccaggctagtcttgaactcctggcctcaagtgatccacctgcctcagcctcccaaactgctgggattacagtca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102625907 273 - 106955855 ttttttttttt--gagatggtgtctggttctgtcacccaggctatagtccagtggcacgatctcagctcattgcaactttagcctcctgggttcaagtgattctcctgcctcagcct-ccaagtagctgggattacaggcgcatgccaccatgcccaactaatgtttgtatttttagttaagacgaggtttcaccaagttggctgagctggtctcaaactcctggcctcaagtgatccacctgcctcagcctcccagactgctgggattacaggca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59913719 273 + 64156825 tttttttttttttgagatggaatctgattctgtcacctggactggagtccagtggcgcaatctcggctcattgcaacttcagcctcctgtgttcaagtgattctcctgcctcagcctcccaaggagctgggattacaggctcatgccactacacccggc---tgtttgtatttttagttaagatgaggtttcaccaagttggccaggctggtctctaactcctggcctcaagtgatccacttgcctcggcctccccaactgctgggattacaggtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54933173 273 + 59248254 tttttttttttttgagatggaatctgattctgtcacctggactggagtccagtggcgcaatctcggttcattgcaacttcagcctcctgggttcaagtgattctcctgcctcagcctcccaaggagctgggattacaggctcatgccactacacccggc---tgtttgtatttttagttaagatgaggtttcaccaagttggccaggctggtctctaactcctggcctcaagtgatccacttgcctcggcctccccaactgctgggattacaggtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47049624 273 + 51301725 tttttttttttttgagatggaatctggtcctgtcacctggactggagtccagtggtgcaatctcggctcattgcaacctcagcctcctgggttcaagtgattctcctgcctcagcctcccaaggagctgggattacaggtgcatgccaccacacctggc---tgtttgtatttttagttaagatgaggtttcaccaagttggtcgggctggtctcgaactcctggcctcaagtgatccacctgcctcggcctccccaactgctgggattacaggtg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19541434 22356 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46761202 14 + 50890351 I a score=764138.000000 s hg38.chr19_GL949747v2_alt 56332 343 + 729520 tgagccactgtgccagg---------ccTTCATCACCAt-----tttttttttttcttttgagacagagttccactctttcgcccaggctggagtgaagtggcaaaatctcatctcattgcaacctccaccccccaggttcaagcggttctcctgcctcagcctcccaagtagctgggattacaggagcccttcaacatgcccagtta------------------------------------------atttttgta----ttttttagtagagatgaggtttcaccatgttggccaggctggtctcaaactcctgatctcaagtgatccacccacctcagcctcccaaagtgctgggattacaggcatgagccactgtgcccagccAGTCATGAG-CTCA--T s panTro4.chr19 58990107 341 + 63644993 tgagccactgtgccagg---------ccTTCATCACCAt-----ttttttttt--cttttgagacagagttccactctttcgcccaggctggagtgaagtggcataatctcatctcattgcaacctccaccccccaggttcaagcggttctcctgcctcagcctcccaagtagctgggattacaggagcccttcaacacgcccagtta------------------------------------------atttttgta----ttttttagtagagatgaggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccacccacctcagcctcccaaagtgctgggattacaggcatgagccactgtgcccagccAGTCATGAG-CTCA--T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55865857 338 + 60714840 tgagccactgtgccagg---------ccTTCATCACCAt-----ttttttttt------tgagatagacttccactcttttgcccaggctggagtgaagtggcataatctcatctcactgcaacctccaccccccaggttcaagcggttctcctgcctcagcctcccaagtagctgggattacaggagcccttcaacacgcccagtta------------------------------------------atttttgta----ttttttagtagagatgaggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccacccacctcagcctcccaaagtgctgggattacaggcatgagccactgtgcccagccAGTCATGAGCCTCA--T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102626180 351 - 106955855 tgagccaccacgccaggACTTCATCACCTTCATCACCtt-----ttttttttttttttttgagatggagttccactctttcgcccaggctggagtgaagtggtgtaatctcagctcactgcaacctccatcccccaggttcaagtgattctcctgcctcagccgcccgagtagctgggattacaggagccctccaacatgcccagtta------------------------------------------atttttgta-----tttttagtagagacgaggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccactgtgcccagccAGTCATGAG-CTCA--T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59913992 387 + 64156825 tgagccaccgcaccagg---------ccGTCATCACCCC----tttttttttttttttttgagattgagttccactcttttgcccaggctggagtgaagtggcataatctcagctcactgcaacctctcccccccaggttcaagtaattctcctgcctcagcctcccgagtagctgggattacaggtgccctccaacatgcccagttaatttattatc---attattattattatactttaagccaggtcatttttgta-tttttttttagtagagacgaggtttcaccatgttggccagggtggtctcgaactcctgacctcaagtgatccacccgcctcagcctcccaaagtgttgcgattacaggcgtgagccactgtgcccagccAGTCATGAG-CTCA-TT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54933446 384 + 59248254 tgagccaccgcaccagg---------ccTTCATCACCAC--------tttttttttttttgagatggagttccactcttttgcccaggctggagtgaagtggcataatctcagctcgctgcaacctctacccaccaggttcaagtaattctcctgcctcagcctcccgagtagctgggattacaggtgccctccaacatgcccagttaatttattatc---attattattattatactttaagccagttcatttttgtattttttttttagtagagacgaggtttcaccatgttggccagggtggtctcgaactcctgacctcaagtgatccacccgcctcagcctcccaaagtgttgcgattacaggcgtgagccactgtgcccagccAGTCATGAG-CTCA-TT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47049897 349 + 51301725 tgagccaccgcgccagg---------ccttcatcaccactttttttttttttttttttttgagatggagttctactctttcgcccaggctggagtgaagtggcgtaagctcagctcactgcaacctccaccccccaggttcaagtaattctcctgcctcagcctcccgagtagctgggattacaggtgccctccaacatgcccagtta------------------------------------------atttttgta----ttttttagtagagacgaggtttcaccatgttggccagggtagtctcgaactcctgacctcaagtgatccacccacctcagcctcccaaagtgttgcgattacaggcgtgagccactgtgcccagccagtcatgag-ttca-tt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761216 395 + 50890351 TGAGCCACCGCACCAGG---------CCTTCATCACCACttcttttttttttttttttttgagatggggttccactctttcgcccaggctggagtgaagtggcataatctcagctccctgcatcctccacccaccagtttcaagtaattctcctgcctcagcctcccgagtagctgggattacaggtgccctccaacatgcctagttaatttattatcattattattattattatactttaagccagttaatttttgta-tttttgtttagtagagacgaggtttcaccatgttggccagggtggtctcgaactcctgacctcacgtgatccacccgcctcagcctcccaaagtgttgcgattacaggcgtgagccactgtgcccagccAGTCATGAG-CTCATTT i chlSab2.chr6 I 14 C 0 e canFam3.chr1 19541434 22356 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=144425.000000 s hg38.chr19_GL949747v2_alt 56675 50 + 729520 TTTTTAAGTTCAGaatatttcagtacatatctatctttatcaaataagaa s panTro4.chr19 58990448 50 + 63644993 TTTTTAAGTTCAGaatatttcagtacatatctatctttatcaaataagaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55866195 50 + 60714840 TTTTTAAGTTCAGACTATTTCAATACATATCTATCTTTATAAAATCAGAA i ponAbe2.chr19 C 0 I 25 s nomLeu3.chr10 102626531 50 - 106955855 TTTTTAAGTTCAGaatatttcagtacgtatctatctttatcaaataagaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59914379 50 + 64156825 TTTTTAAGTTCAGaatatttcagtacatatatatctttatcaaataagaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54933830 50 + 59248254 TTTTTAAGTTCAGaatatttcagtacatatatatctttatcaaataagaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47050246 50 + 51301725 tttttaagttcagaatatttcagtatatatatatctttatcaaataagaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761611 50 + 50890351 TTTTTAAGTTCAGaatatttcagtacatatatatcttcatcaaataagaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19563790 50 - 122678785 tttttaatcccaaaatattttagtacatagctatctttatcagatgagaa i canFam3.chr1 I 22356 C 0 e calJac3.chr22 45321063 9366 + 49145316 I a score=246775.000000 s hg38.chr19_GL949747v2_alt 56725 143 + 729520 -ccattttaaaa---ataatataagcaccacagcactgtcacatcaagaaagttaagagtacctccttgataccagctaat-acccattcagtactcaaatttccctgattgtctcaaaaatgtcatttctatcaggtttttaaagaa s panTro4.chr19 58990498 143 + 63644993 -ccattttaaaa---ataatataagcaccacagcactgtcacatcaagaaagttaagagtacctccttgataccagctaat-acccattcagtactcaaatttccctgattgtctcaaaaatgtcatttctatcaggtttttaaagaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102626581 101 - 106955855 -ccattttaaaa---ataatataagcaccatagcactgtcacatcaggaaagttaaGAGTG-------------------------------------------cttgattgtctcaaaaatgtcatttctatcaggtttttaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59914429 143 + 64156825 -ccattttaaaa---ataatataaacaccatagcactgtcacatcaggaaaatgaagggtacttccttgataccagctaat-acccattcagtattcaaatttccttgattgtctcaaaaatgtcatttctatcaggcttttaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54933880 143 + 59248254 -ccatttttaaa---ataatataaacaccatagcactgtcacatcaggaaaatgaagggtacttccttgataccagctaat-acccattcagtattcaaatttccctgattgtctcaaaaatgtcatttctatcaggcttttaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47050296 143 + 51301725 -ccattttaaaa---ataatataaacaccaTAGCACTGTCACATCAGGAAAGTTAAGAGTACTTCCTTGATACTAGCTAAT-ACCCATTCAGTATTCAAATTTCCCTGATTGTCTCAAAAATGTCATTTCtatcaggcttttaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761661 143 + 50890351 -ccattttaaaa---ataatataaacactatagcactgtcacatcaggaaaatgaagggtacttccttgataccagctaac-acccattcagtattcaaatttccctgattgtctcaaaaatgtcgtttctatcaggcttttaaaaaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19563840 133 - 122678785 tctgttttaaaaaatatataataaccaccaaagcaatatcatagtagta--------------tctttgctaccatcgcataatccagtcagtatccatatttcctcaataatatcaaatatatt-cttcggtcagtttttttaaaaa i canFam3.chr1 C 0 I 226 e ponAbe2.chr19 55866245 25 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I a score=98561.000000 s hg38.chr19_GL949747v2_alt 56868 55 + 729520 taaatcaggatccaataaaagtctacagattgcatttgataattatgtTAATTTA s panTro4.chr19 58990641 55 + 63644993 taaatcaggatccaataaaagtctgcagattgcatttgataattatgtTAATTTA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102626682 55 - 106955855 taaatcaggatccaattaaagtctgcagattgcatttaataattatgtTAATTTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59914572 55 + 64156825 taaatcagaatccaattaaagtctgcagattgaatttgataattatgtTAATTTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54934023 55 + 59248254 taaatcagaatccaattaaagtctgcagattgaatttgataattatgttaattta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47050439 55 + 51301725 taaagcagaatccAATTAAAGTCTGCAGATTGAATTTGATAATTATGTTAATtta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761804 55 + 50890351 taaatcagaatccaattaaagtctgcagattgaatttgataattatgtTAATTTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19563973 226 - 122678785 I e ponAbe2.chr19 55866245 25 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I a score=10948.000000 s hg38.chr19_GL949747v2_alt 56923 4 + 729520 gcct s panTro4.chr19 58990696 4 + 63644993 gcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55866270 4 + 60714840 gcct i ponAbe2.chr19 I 25 C 0 s nomLeu3.chr10 102626737 4 - 106955855 gcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59914627 4 + 64156825 gcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54934078 4 + 59248254 gcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47050494 4 + 51301725 gcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761859 4 + 50890351 gcct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19563973 226 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=830598.000000 s hg38.chr19_GL949747v2_alt 56927 292 + 729520 ggcgcagtggctcatgcctgtaatcccaacactttgggagaccggggcaggtagataacctgaggtcaggagttcgagaccagcctggccaaccatggtgaaacctcatctctactaaaaatacaaaaattagctgggcgtggtggtgcacgcctgtaatcccagctactcaggaggctgaggcaggagaactgcttgaacctgggaggcaaaggttgcagtgagctgagatcgcaccattgcactccagcctgggcaac-agagtgagactcagtct--caaaaaaaaaaaaaa s panTro4.chr19 58990700 292 + 63644993 ggcgcagtggctcacacctgtaatcccaacactttgggagaccagggcaggtagataacctgaggtcaggagttcgagaccagcctggccaaccatggtgaaagctcatctttactaaaaatacaaaaattagctgggcgtggtggtgcacgcctgtaatcccagctactcgggaggctgaggcaggagaactgcttgaacctgggaggcaaaggttgcagtgagctgagatcgcatcattgcactccagcctgggcaat-agagtgagactcagtct--caaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55866274 291 + 60714840 ggcacagtggctcacgcctgcaatcccaacactttgggagaccgaggtaggtagataacctgaggtcaggagttcgagaccagcctggccaaccatggtgaaacctcatctctactaaaaatacaaaaattagctgggtgtggtggtgcacacctgtaatcccagctactcgggaggctgaggcaggagaactgcttgaacctggcaggcaaa-gttgcagcgagccgagatcgcaccattgcactccagcctgggcaac-agagtgagactcagtct--caaaaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102626741 292 - 106955855 ggcacagtggctcattcctgtaatcccaacactttgggagaccgaggcaggtagatcacctgaggtcaggagttcgagaccagcctggccaaccatggtgaaacatcatctctactaaaaatacaaaaattagctgggtgtggtggtgcacgcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcaaaggttgcagtgagctgagatcgcatcattgcactccagcctgggcaac-agagcgagactctgtat--caaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59914631 286 + 64156825 ggcgcagtggctcatgcctgtaatcccaacactttgggagaccgaagcaggtagatcagctaaggtcaggagttcaagaccagcctggccaa-catggtgaaacctcgtctctactagaaatacaaaaattagctgggcgtggtggtgcacacctgtaatcccagctagtcgtgagggtgaggcagaagaactgcttgaacctgggaggcgaaggttgcagtgagctgagatcgcaccattgcactccagcctaggcaac-agagagagtctc-------aaaaaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54934082 293 + 59248254 ggcgcagtggctcatgcctgtaatcccaacactttgggagaccgaagcaggtagatcagctaaggtcaggagttcaagaccagcctggccaa-catggtgaaacctcgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtaatcccagctagtcgtgagggtgaggcagaagaactgcttgaacctgggaggcgaaggttgcagtgagctgagatggcaccattgcactccagcctaggcaac-agagagagactctgtctcaaaaaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47050498 291 + 51301725 ggcgcagtggctcatgcctgtaatcccaacactttgggagaccaaagcaggtagatcacctaaggtcaggagttcgagaccagcctggccaa-catggtgaaacctcgtctctactaaaaatacaaaaattagctgggcatggtggtgcacacctgtaatcccagctagtcatgaggctgaggcagaagaactgcttgaacctgggaggcgaaggttgcagtgggctgagatcgcaccattgcaccccagcctgggcaac-agagagagactccgtct--caaaaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761863 291 + 50890351 ggcacagtggctcatgcctgtaatcccaacactttgggagaccgaagcaggtagatcacctaaggtcaggagttcgagaccagcctggccaa-catggtgaaacctcgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtaatcccagctagtcgtgaggctgaggcagaagaactgcttgaacctgggaggcgaaggttgcagtgagctgagatcgcaccattgcactccagcctaggcaac-agagagagactctgtct--caaaaaaaaaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45330429 289 + 49145316 ggtgcggtggctcatgcctgtaatcccagcactttgagaggtggacgcagatggatcacctgaggtcgggagttcgagaccagcctgacgaa-cat--caaacccccgtctctactaaaaaca-gaaaattagctggacgtggtggcgcgtgcctgtagtcccagctactctggaggctgaagcaggagaatctcttgaacccaggaggcggaggttgcggtgaaccgagatcgcgccattgcactccagcctgggcaacaagggcaaaactccgtct--caaaagcaaaaaaag i calJac3.chr22 I 9366 C 0 e canFam3.chr1 19563973 226 - 122678785 I a score=-507.000000 s hg38.chr19_GL949747v2_alt 57219 2 + 729520 -aa s panTro4.chr19 58990992 1 + 63644993 -a- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55866565 2 + 60714840 -aa i ponAbe2.chr19 C 0 I 742 s nomLeu3.chr10 102627033 2 - 106955855 -aa i nomLeu3.chr10 C 0 I 9 s rheMac3.chr19 59914917 2 + 64156825 -aa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54934375 2 + 59248254 -aa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47050789 2 + 51301725 -aa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46762154 2 + 50890351 -aa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45330718 2 + 49145316 -aa i calJac3.chr22 C 0 C 0 s canFam3.chr1 19564199 2 - 122678785 ga- i canFam3.chr1 I 226 C 0 a score=-1309.000000 s hg38.chr19_GL949747v2_alt 57221 1 + 729520 -a s nomLeu3.chr10 102627044 1 - 106955855 -A i nomLeu3.chr10 I 9 C 0 s rheMac3.chr19 59914919 1 + 64156825 -a i rheMac3.chr19 C 0 I 11 s macFas5.chr19 54934377 1 + 59248254 -a i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47050791 1 + 51301725 -a i papAnu2.chr19 C 0 I 11 s chlSab2.chr6 46762156 1 + 50890351 -a i chlSab2.chr6 C 0 I 11 s calJac3.chr22 45330720 1 + 49145316 -a i calJac3.chr22 C 0 C 0 s canFam3.chr1 19564201 1 - 122678785 t- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55866567 742 + 60714840 I e panTro4.chr19 58990993 0 + 63644993 C a score=104318.000000 s hg38.chr19_GL949747v2_alt 57222 44 + 729520 TGTTAATTTGAATCAGACAAAATTTTTTATTTTTTTGTTAAAAT s panTro4.chr19 58990993 44 + 63644993 TGTTAATTTGAATCAGACaaaattttttatttttttgttaaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55867309 44 + 60714840 TGTTAATTTGAATCAGACAAAATTTTTTACTTTTTTGTTAAAAT i ponAbe2.chr19 I 742 C 0 s nomLeu3.chr10 102627045 44 - 106955855 TGTTAATTTGAATCAGACAAAATTTTTTATTTTTTTGTTAAAAT i nomLeu3.chr10 C 0 I 299 s rheMac3.chr19 59914931 44 + 64156825 TGTTAATTTAAATCAGACAAAATTTTTGATTCGTTTGTTAAAAT i rheMac3.chr19 I 11 C 0 s macFas5.chr19 54934389 44 + 59248254 tgttaatttaAATCAGACAAAATTTTTGATTCGTTTGTTAAAAT i macFas5.chr19 I 11 C 0 s papAnu2.chr19 47050803 44 + 51301725 tgttaatTTAAATCAGACAaaatttttgatttgtttgttaaaat i papAnu2.chr19 I 11 C 0 s chlSab2.chr6 46762168 44 + 50890351 CGTTAATTTAAATCAGACAAAATTTTTGATTTGTTTGTTAAAAT i chlSab2.chr6 I 11 C 0 s calJac3.chr22 45330721 5 + 49145316 -----------------aaaga---------------------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19564202 44 - 122678785 cgataGGCCAATTCAGACAAAATTCCCAATGTCTTTGTTAAAAT i canFam3.chr1 C 0 C 0 a score=425756.000000 s hg38.chr19_GL949747v2_alt 57266 140 + 729520 AAGAAATCAAGCAAGTT---AGTTTTTAACCATGTTTTTTTTCATCTTGCATTTGGAAGAAGAGCAAAATGCCCCGAAGTCTCGTTTTTGTTTTCGGA-TTTTTTGTCTTGATAGCACCTACTCTTCTTACTGTTTTGGAACAT s panTro4.chr19 58991037 140 + 63644993 aaGAAATCAAGCAAGTT---AGTTTTTAACCATGTTTTTTTTCATCTTGCATTTGGAAGAAGAGCAAAATGCCCCCAAGTCTCGTTTTTGTTTTCAGA-TTTTTTGTCTTGATAGCACCTACTCTTCTTACTGTTTTGGAACAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55867353 140 + 60714840 AAGAAATCAAGCAAGTT---AGTTTTTAACCATGTTTTTTTTCATCATGCATTTGGAAGAAGAGCAAAATGCCCCCAAGTCTTGTTTTTGTTTTCGGA-TTTTTTGTCTTGATAGCACTTACTCTTCTTACTGTTTTGGAACAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102627388 141 - 106955855 aagaaaTCAAGCAAGTT---AGTTTTTATCCATGTTTTTTTTCATCATGCATTTGGAAGAAGAGCAAAATGCCCCCAAGGCTTGTTTTTGTTTGCGGATTTTTTTGTCTTGATAGCACCTACTCTTCTTACTGTTTTGGAACAC i nomLeu3.chr10 I 299 C 0 s rheMac3.chr19 59914975 139 + 64156825 AAGAAATCAAGCAAGTT---GGTTTTTAACCATG-TTTTTTTCATCATGCATTTGGAAGAAGAGCAAAATGACCCCAAGGCTTGTTTTGGTTTTCGGA-TTTTTTGTCTTGATAGCACCTACTCTTCTTACTGTTTTGGAACAT i rheMac3.chr19 C 0 I 322 s macFas5.chr19 54934433 139 + 59248254 AAGAAATCAAGCAAGTT---GGTTTTTAACCATG-TTTTTTTCATCATGCATTTGGAAGAAGAGCAAAATGACCCCAAGGCTTGTTTTGGTTTTCGGA-TTTTTTGTCTTGATAGCACCTACTCTTCTTACTGTTTTGGAACAT i macFas5.chr19 C 0 I 325 s papAnu2.chr19 47050847 139 + 51301725 aagaaatcaagCAAGTT---GGTTTTTAACCATG-tttttttCATCATGCATTTGGAAGAAGAGCAAAATGACCCCAAGGCTTGTTTTGGTTTTCGGA-TTTTTTGTCTTGATAGCACCTACTCTTCTTACTGTTTTGGAACAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46762212 140 + 50890351 AAGAAATCAAGCAAGTT---GGTTTTTAACCATGTTTTTTTTCATCATGCATTTGGAAGAAGAGCAAAATGACCCCAAGGTTTGTTTTGGTTTTCGGA-TTTTTTGTCTTGATAGCACCTACTCTTCTTCCTGTTTTGGAACAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45330726 131 + 49145316 gaaaGATCAAGTC--TT---GGGTTTTAACTATG-TTTTCTCCATCACGCATTTGGGAGAAGAGCAAGATG-CCCCAAAGCTTGTTTTTGTTTTCGGA-TCTTCTGTCTCGGTAGT-----CTCTTCTTACTGCTTTGGAACAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19564246 120 - 122678785 AAGAAGCCAAGCACATCATAGGTTTTT----ATGATTTTTTCCACCATTAATTTGGAAGAAAAGCAACATGCCCCTGAG--------------------ACTATTGTCTTGACAGAGCTTACTTATCTTTCTGTTCAGTAATAT i canFam3.chr1 C 0 C 0 a score=368490.000000 s hg38.chr19_GL949747v2_alt 57406 105 + 729520 AGAAAAGTCAACAAGGCAACAAATTA-TAAGGAGTAAAACCAACTATAATTACAGGTGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC s panTro4.chr19 58991177 105 + 63644993 AGAAAAGTCAACAAGGCAACAAATTA-TAAGGAGTAAAACCAACTATAATTACAGGTGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55867493 105 + 60714840 AGAAACGTCAACAAGGCAACAAATTA-TAAGGAGTAAAACCAACTATAATTACAGGTGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATAATTTTTAAAGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102627529 105 - 106955855 AGAAAAGTCAACGAGGCAACAATCTG-TAAGGAGTAAAACCAACTATAATTACAGGTATTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59915436 105 + 64156825 agaaaAGTCAACAAGGCAACAAATTA-TAAGGAATAAAACCAACTATAATTACAGATGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC i rheMac3.chr19 I 322 C 0 s macFas5.chr19 54934897 105 + 59248254 aGAAAAGTCAACAAGGCAACAAATTA-TAAGGAATAAAACCAACTATAATTACAGATGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC i macFas5.chr19 I 325 C 0 s papAnu2.chr19 47050986 105 + 51301725 AGAAAAGCCAACAAGGCAACAAATTA-TAAGGAATAAAACCAACTATAATTACAGGTGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46762352 105 + 50890351 AGAAAAGTCAACAAGGCAACAAATTA-TAAGGAATAAAACCAACTATAATTACAGATGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45330857 105 + 49145316 AGAAGAGTCAACGAGACGACCAGTTC-TGACGGAGTAAAGCAATTACAATCTCAGGTGCTTCTTTGAGAGTGATTTTCACAGGATGTGGCCATGATTTTTCAAGGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19564366 106 - 122678785 AGAAAAATCAACAAGGCAACGAATTATTGGGGAGAGAAACCAATTATAATCACAGGAGTTTCTTTGAGGGTGATCTCCAAAAGATATGGCAATGATTTTTAAAGTC i canFam3.chr1 C 0 I 210 a score=601735.000000 s hg38.chr19_GL949747v2_alt 57511 175 + 729520 TTGGGACTCTTACAAGACCCTTTTGTTCAAATAACAGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAATGTTTGTGAA-TATTCATTTAGTTCTCCATATTGTACCAGAAAACAAGACTGATATTCTTGTGAATCTTCTCAATTCAACTCTTTATCAAATCAGATT s panTro4.chr19 58991282 175 + 63644993 TTGGGACTCTTACAAGACCCTTTTGTTCAAATAACAGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACGTTTGTGAA-TATTCATTTAGTTCTCCATATTGTACCAGAAAACAAGACTGATATTCTTGTGAATCTTCTCAATTCAACTCTTTATCAAATCAGATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55867598 175 + 60714840 TTAGGACTCTTACAAGACCCTTTTGTTCAAATAATGGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACAGTTGTGAA-TATTCATTTAATTCTCCATATTGTACCAGAAAACAAGATTGATATTCTTGGGAATCTTCTTAATTCAACATTTTATCAAATCAGATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102627634 175 - 106955855 TTGGGATTCTTATAAGATTCTTTTGTTCAAATAACAGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACAGTTATAAA-TATTCATTTAATTCTCCATATTGTACCAGAAAACAAGATTGATATTCTTGGGAATCTTCTCAATTCAACACTTTATCAAATCAGATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59915541 175 + 64156825 TTGGGACTCTTAGAAGACCCTTTTGTTCAAATAACAGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACAGTTATGAA-TATTCATTTAATTCTCCATATTGTACCAGAAAACAAGATTGATATCCTTGGGAATCTTCTCAATTCAACACTTTATCAAATCAGATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54935002 175 + 59248254 TTGGGACTCTTAGAAGACCCTTTTGTTCAAATAACATTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACAGTTATGAA-TATTCATTTAATTCTCCATATTGTACCAGAAAACAAGATTGATATCCTTGGGAATCTTCTCAATTCAACACTTTATCAAATCAGATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47051091 175 + 51301725 TTGGGACTCTTACAAGACCCTTTTGTTCAAATAACAGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACAGTTATgaa-tattcatttaattctccATATTGTACCAGAAAACAAGATTGATATCCTTGGGAATCTTCTCAATTCAACACTTTATCAAATCAGATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46762457 175 + 50890351 TTGGGACTCTTACAAGACCCTTTTGTTCAAATAACAGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACAGTTATGAA-TATTCATTTAATTCTCCATATTGTACCAGAAAACAAGATTGATACCCTTGGGAATCTTCTCAATTCAACACTTTATCAAATCAGATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45330962 181 + 49145316 TTGGGACTCTTACAAGACCCTTTTGTTC-AATGACAGTTTTCTATGCATGAATTTATTTCAACAGAGAAGAGAACAATTTAGCAACCGTCATGAA-TATTCATGTAATTCTCCATATTGTACCAGAAAACAAGATTGATATTCTTGGGAATCTTCTCAATTCAACACTTTATCAAATCTGATT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19564682 172 - 122678785 TTGAGATTCTTATGAGACCCTTTTGTTTAAATAACACTTC--TCTGTGTAGATTTATTTCAACAGAGTAGAGAACAATATAGTAAA----ATGAATTATTTATGTGATTCTCCTAATTGCACC-GGAAACAACACTGATACTTTTGGCAAAGCTTTCACCTCAACACTTT----AATCAgatt i canFam3.chr1 I 210 I 888 a score=1545861.000000 s hg38.chr19_GL949747v2_alt 57686 539 + 729520 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGGAAAAGAGGACATCTCCTATATTTCTTCTTAACATCTCTGTTGCTAACAAGGAATATGCATATTTTAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAAGGCCTGGTAAAGTTCCATTCCACTTGGAAATGAAGAAAGGA--------GACCCTGATTCAAAAAACGAA--AAAAG----------------------------------------------------------------------AAAGAATAAAGAATAGCTTAGggccaggcaaggtggatcacacctgtaatcctaagattttgggagg-tgaggtaggtggaaggcttgatcccaggagttcaacaccagcctgggcaacatggcctaatcccatctctacaaaaaatac-aaaaattagccaggcttggtggtatatacctgtaatcccagcttctcaggaggctgaggtgggagaatcacttgaacctgggagggggaggtggcagtgagctgagatcgcaccattgtaccc---cagcctgggcaacaagagtgaaactccatctcaaaa---aataataa s panTro4.chr19 58991457 542 + 63644993 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGGAAAAGAGGACATCTCCTATATTTCTTCTTAACATGTCTTTTGCTAACAATGAAGATGCATATTTTAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAAGGCCTGGTAAAATTCCATTCCACTTGGAAATGAAGAAAGGA--------GACCCTGATTCAAAAAACGAA--AAAAG----------------------------------------------------------------------AAAGAATAAAGAATAGCTTAGggccaggcaaggtggatcacacctgtaatcctaagattttgggagg-tgaggtaggtggaaggcttgatcccaggagttcaacaccagcctgggcaacatggcctaatcccatctctacaaaaaatac-aaaaattagccaggcttggtggtatatacctgtaatcccagcttctcaggaggctgaggtgggagaatcacttgaacctgggagggggaggttgcagtgagctgagatcgcaccattgcaccc---cagcctgggcaacaagagtgaaactccatctcaaaaaataataataa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55867773 542 + 60714840 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGAAAAAGAGGACATCTCCTATATCTCTTCTTAACATCTCTTTTGCTAACAATGAAGATGCATATTTTAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAAGGCCTGGTAAAGTTCCATTCTGCTTAGAAATGAAGAAAAGA--------GACCCTGATTCAAAAAACAAA--AAAAG----------------------------------------------------------------------AAAGAATAAAGAATAGCTTAGggccaggcaaggtggatcacacctgtaatcctaagattttgggagg-tgaggtaggtggatggcttgatcccaggagttcaacatcagcctggacaacatggcctaaccccatctctacaaaaaatac-aaaaattagccaagtgtggtggtgcacacctgtaatcccagctactcaggaggctgaggtggaagaatcgcttgaacctgggagggggaggttgcagtgagctgagattgcaccattgcactc---cagcctgggcaacaagagtgaaactccatctctaataataataataa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102627809 544 - 106955855 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGAAAAAGAGGACATCTCCTATATCTCTTCTTAACATCTCTTTTGCTAACAACGAAGATGCCTATTTTAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAAGGCCTAGTAAAGTTCCATTCCACTTAGAAATGAAGAAAGGA--------GACCCTGATTCAAAAAACAAAACAAAAC----------------------------------------------------------------------AAAGAATAAAGAATAGCTTAGggccaggcagggtggatcatacctgtaatcctaagatttcgggagg-tgaggtaggtggatggcttgatcccaggagttcaacaccagcctgggcaacatggcctaaccccatctctacaaaaaatac-aaaaattagccgggtttggtggtgcatacctttaatcccagcttctcaggaggctgaggtgggagaatcgcttgaacctgggagggggagattgcagtgagctgagatcacaccattgcgccc---cagcctgggcaacaagagtgaaactccatctcaaaaaataataataa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59915716 540 + 64156825 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGAAAAAGAGGATATCTCCTATATCTCTTCTTAACATCTCTTTTGCTAACAATGAAGATGCATATTTGAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAAAATCTGGTAAAGTTCTATTTCACCTAGAAATGAAGAAAGGA--------GACCCTGATTCAAAAAACAAA--AAAAG----------------------------------------------------------------------AAAGAATAACGAATAGCTTAGggccaggtaaagtggatcacacctgtaatcctaacattttgggagg-tgaggtaggtggatggcttgatcccaggagttcaacactagcctgggcaacatggcctaaccccatctctacaaaaaatac-aaaaattagccaggcatggtggtgcaaacctgtaatcccagctactcaggaggctgaggtgggagaattgcttgaacctgggatgtggaggttgcagtgagccgagattgcaccgttgcactc---cagcctgggcaacaagagtgaaactccatctcaaaaaataatagt-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54935177 540 + 59248254 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGAAAAAGAGGATATCTCCTATATCTCTTCTTAACATCTCTTTTGCTAACAATGAAGATGCATATTTGAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAAAATCTGGTAAAGTTCTATTTCACCTAGAAATGAAGAAAGGA--------GACCCTGATTCAAAAAACAAA--AAAAG----------------------------------------------------------------------AAAGAATAACGAATAGCTTAGggccaggtaaagtggatcacacctgtaatcctaacattttgggagg-tgaggtaggtggatggcttgatcccaggagttcaacactagcctgggcaacatggcctaaccccatctctacaaaaaatac-aaaaattagccaggcatggtggtgcaaacctgtaatcccagctactcaggaggctgaggtgggagaattgcttgaacctgggatgtgaaggttgcagtgagccgagattgcaccgttgcactc---cagcctgggcaacaagagtgaaactccatctcaaaaaataatagt-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47051266 542 + 51301725 CCTTAAATTAGTGTTGTGactcagaaaaaaatctttctccTTATGCAGTATCAGGAAAAAGAGGATATCTCCTATATCTCTTCTTAACATCTCTTTTGCTAACAATGaagatgcatattttaaaactaggCTCTGGAATTTTATCAGTCAACAGGAAAAATCTGGTAAAGTTCTATTTCAcctagaaatgaagaaagga--------gaccctgattcaaaaaacaaa--aaaag----------------------------------------------------------------------aaagaataatgaatAGCTTAGGGCCAGGTaaagtggatcacacctgtaatcctaacattttgggagg-tgaggtaggtggatggcttgatcccaggagttcaacactagcctgggcaacatggcctaaccccatctctacaaaaaatac-aaaaattagccaggcatggtggtgcaaacctgtaatcccagctactcaggaggctgaggtgggagaatcgcttgaacctgggatgtggaggttgcagtgagccgagattgcaccgttgcactc---cagcctgggcaacaagagtgaaactccatctcaaaaaataataata- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46762632 543 + 50890351 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGAAAAAGAGGATATTTCCTATATCTCTTCTTAACATCTCTTTTGCTAACAATGAAGATGCATATTTTAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAATATCTGGTAAAGTTCTATTTCACCTAGAAATGAAGAAAGGA--------GACCCTGATTCAAAAAACAAA--AAAAG----------------------------------------------------------------------AAAGAATAACGAATAGCTTAGggccaggtaaagtggatcacacctgtaatcctaacattttgggagg-tgaggtaggtggatgacttgatcccaggagttcaacactagcctgggcaacatggcctaaccctatctctacaaaaaatac-aaaaattagccaggcatggtggtgcaaacctgtaatcccagctactcaggaggctgaggtgggagaatcgcttgaacctgggatgtggaggttgcagtgagccgagattgcactgttgcactcttgttgcctgggcaacaagagtgaaactccatctcaaaaaataataat-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45331143 615 + 49145316 CCTTAAATTAGGGTTGTGACTCAG-AAAAAATCTTCCTCCTTATGCAGTATCAGGAAAAAGAGGACATCTCCTGTATCTCTATTTAACATCTCTTTTGCTAACGGTGAAGATGTATATTTTAAAACTAGGCACTGGAATTTTATCAGTCAACAGAAACGCCCTGGTAAAGTTCCATTCCAGTTAGAAATGAAGGAAGGACTGAGCTGgactccgtctcaaaaaaaaaa--aaaaaaaaagaaagaaaaaagaaaTGAAGGAATAAATAGGAtttttttttttttttttttttGAGACCCTGATTCAAAAAATAAAGAATAGCT--Gggtcgggcgcggtggctcaggcctataatcccagcactttgggaggccgaggcgggtggatcacgaggt--caagagatcgagaccatcctggtcaacaaggtgaaaccccgtctctactaaaaatacaaaaaattagctgggcatggtggcgcgtgcctgtagtcccagctactcgggaggctgaggcaggagaattgcctgaacccaggaggcggaggttgccgtgagccgagatcgcgccattgcactc---cagtctgggtaacgagagtgaaactctgtctcaaaaaaaaaaaa--- i calJac3.chr22 C 0 I 716 e canFam3.chr1 19564854 888 - 122678785 I a score=117675.000000 s hg38.chr19_GL949747v2_alt 58225 57 + 729520 taa-------------aataa-ataaataaaTAATCATTCACTTTGTTAGGTGTTTATCACACCTAACCTT s panTro4.chr19 58991999 57 + 63644993 taa-------------aataa-ataaaTAAATAATCATTCACTTTGTTAGGTGTTTATCACACCTAACCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55868315 71 + 60714840 taataataataataataataataTAAATAAATAATCATTCACTTTGTTAGGTGTTTATCACACCTAACCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102628353 56 - 106955855 t---------------aataaaataaataaATAATCATTCACTTTGTTAAGTGTTTATCACACCTAACCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59916256 50 + 64156825 --------------------a-ataaataaaTAGTCATTCACTTTGTTAGGTGTTTATCACACCTAACCTT i rheMac3.chr19 C 0 I 239 s macFas5.chr19 54935717 50 + 59248254 --------------------a-ataaataaaTAGTCATTCACTTTGTTAGGTGTTTATCACACCTAACCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47051808 54 + 51301725 ----------------aataa-ataaataaatagtcattCACTTTGTTAGGTGTTTATCACACCTAACCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46763175 54 + 50890351 ----------------aataa-ataaataaataaTCATTCACTTTGTTAGGTGTTTATCACACCTAACCTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I a score=2548.000000 s hg38.chr19_GL949747v2_alt 58282 1 + 729520 A s panTro4.chr19 58992056 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55868386 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102628409 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59916545 1 + 64156825 a i rheMac3.chr19 I 239 C 0 s macFas5.chr19 54935767 1 + 59248254 A i macFas5.chr19 C 0 I 238 s papAnu2.chr19 47051862 1 + 51301725 A i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46763229 1 + 50890351 A i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I a score=15504.000000 s hg38.chr19_GL949747v2_alt 58283 8 + 729520 AGAATATG s panTro4.chr19 58992057 8 + 63644993 AGACTATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55868387 8 + 60714840 AGAATATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102628410 8 - 106955855 AGAATATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59916546 8 + 64156825 agaaTATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54936006 8 + 59248254 agaaTATC i macFas5.chr19 I 238 C 0 s papAnu2.chr19 47051863 8 + 51301725 AGAATATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46763230 8 + 50890351 AGAATATC i chlSab2.chr6 C 0 I 234 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I a score=17599.000000 s hg38.chr19_GL949747v2_alt 58291 8 + 729520 TTACCAAA s panTro4.chr19 58992065 8 + 63644993 TTACCAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55868395 8 + 60714840 TTACCAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102628418 8 - 106955855 CTACCAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59916554 8 + 64156825 TTACCAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54936014 8 + 59248254 TTACCAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47051871 8 + 51301725 Ttactaga i papAnu2.chr19 C 0 I 1727 s chlSab2.chr6 46763472 8 + 50890351 TTACTAAA i chlSab2.chr6 I 234 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I a score=2181526.000000 s hg38.chr19_GL949747v2_alt 58299 1306 + 729520 ATAAAAAGTCttatagatgaaatcatattatatctgaggtttactttaaaatactccaggagaaaatttaaaatagacttgggggAGGGGACTTATCTGTAGTTATCTGCACATAATCTACATGATTATCTCAAAGCCATCCTTTTGCTGTTGAGAATTctgatttttagctgggcccattggcacccaggtaaaaaa-ctacattcttcagtgtcacttacaggtagatgtagccgtaagtcttcatctaggacaatgataaataagcataaatattgtagacagcttccaaaaggttctttaatgaagtacactttccttccttcacttaactgcctaaaatgtggatgtgatgactggtattctagcgtcatcttgaaccatgaagatgagatgaggttcaagatggtggagggtgagccagaagtaacttaggtccataatgctttttggagtcactgtgccagccttggactgctcccttcagatttattctacataagggagaaatcaattggtattagttttaagtcatcattatttagttctctTTTGGgtttaggttatcaattactgtgttaacaaaccaccccaaaactgagtaacttagagtaacaatcttg-----tttttttttttttttaatcattcctgatctggtgagatgactgggctcagttgagcggttcttcggttcaatgtgatgtcttcctgggcttcagtcatcagggtggctcaactgagctggaatctccaagatggcacttgcaaatggctggctgttgatgctggatgttggttgaaagctcggctaggactgttgaatgatgtacctgcacatggcctctccatttgattcagacttcttggaggatagcatctgggtttcaagaggggatgtcacaagagagctttctaaaatagagaaggcggctgggcatggtggctcacgtctgtaatcccagcactttgggaggccgaggtgggtggatcacctgaggtcaggagttcaacatcagcctggccaacatggtaaaaccccgtctctactaaaaacaaaat-----------------------------------------taaa---aaaaattagccgg-------------------------------------------------------gtgtgtttgtgcacacctgtaatcccagctactcaggaggccgaggcaggagaattgcttgaacctgggagg-cggaagttgcagtgagccgagatcacaccact--------gcactccagcctgggcaacagaatgagactctgtc-tcaa----ataaataaataaataaataaaataaagaaggcaaaagttgtttgtccctttaaagactaagcctggaactgacacagtttctcttcttc s panTro4.chr19 58992073 1309 + 63644993 ATAAAAAGTCttatagatgaaatcatattatatctgaggtttactttaaaatactccagcagaaaatttaaaatagacttgggggAGGGGACTTATCTGTAGTTATCTGCACATAATCTACATGATTATCTCAAAGCCATCCTTTTGCTGTTGAGAATTctgatttttagctgggcccattggcacccaggtaaaaaa-ct--attcttcagtgtcacttacaggtagatgtagccgtaagtcttcatctaggacgatgataaataagcataaatattgtagacagcttccaaaaggttctttaatgaagtacactttccttccttcacttaactgcctaaaatgtggatgtgatgactgatactctagcgtcgtcttgaaccatgaagatgagatgaggttcaagatggtggagggtgagccagaagtaacttaggtccataatgctttttggagtcattgtgccagccttggactgctcccttcacatttattctacataggggagaaatcaattggtattagttttaagtcatcattatttagttctctTTTGGgtttaggttatcaattactgtgttaacaaaccaccccaaaactgagtaacttagagtaacaatcttgttttttttttttttttttttaatcattcctgatctggtgagatgactgggctcagttgagcggttcttcggttcaatgtgatgttttcctgggcttcagtcatcagggtggctcaactgagctggaatctccaagatggtgcttgcaaatggctggctgttgatgctggatgttggttgaaagctcggctaggactgttgaatgatatacctgcacatagcctctccatttgattcagacttcttggaggatagcatctgggtttcaagaggggatgtcacaagagagctttctaaaatagaaaaggcggctgggcatggtggctcacatctgtaatcccagcactttgggaggccgaggtgggtggatcacctgaggtcaggagttcaacatcagcctggccaacatggtaaaaccccatctctactaaaaataaaat-----------------------------------------taaa---gaaaattagcggg-------------------------------------------------------gcgtgttggtgcacacctgtaatcccagctactcaggaggccaaggcaggagaattgcttgaacctgggagg-cggaagttgcagtgagccgagatcacaccact--------gcactccagcctgggcaacagaatgagactctgtc-tcaa----ataaataaataaataaataaaataaagaaggcaaaagttgtttgtccctttaaagactaagcctggaactgacacagtttctcttcttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55868403 1308 + 60714840 ATAAAAAGTCTTACAGATGAAATCATACTATATCTGAGGTTTACTTTAAAATACTCCAGCAGAAAATTTAAAATAGACTTGGGTGAGGGGACTTATCTATAGTTATCTGCACATAATCTACATGATTATCTCAAAGCCATCCTTTTGCTGTTGAGAATTctgaattttagctgggcccattgccacccaggtaaaaaa-ctacattcttcaacgtcacttacaggtagatgtagccgtaagtcttcatctaggacaatgacatataagcataaatattgcagacagcttccaaaagattctttaatgaaatacgctttctttccttcacttaactgcctaaaatgtggatgtgatgactgatactctagcgtcatcttgaaccatgaagatgagatgacgttcaagatggcggagggtgaaccagaagtaacttaggtccataatgctttttggagtcattgtgccagccttggactgctcccttcagatttattctacataggggagaaatcaattggtattagttttaagtcatcattatttagttctctTTTGGgtttaagttatcaattactgtgttaacaaaccaccccaaaactgagtaacttagagcaacaatcttgtgttttttttttttttttttaatcattcctgatctggtgagatgactaggctcagttgagcggttcttcagctcaatgtgatgtcttcctgggcttcagtcatcaaggtggctcaactgagctggaatctccaagatggcgcttgcaaatggctggctgttgatgctggatgttgattgagagcttggctaggactgttgaatgatgtacctgcacatggcctctccatttgattcagacttcttggaggatagcatctgggtttcaagaggggatgtcacaagagagctttctaaaatagagaaggtggctgggcacggtggctcacgcctctaatcccagcactttgggaggccgaggtgggtggatcacttgaggtcaggagttcaacatcagcctggccaacatggtaaaaccctgtctctactaaaaataaaat-----------------------------------------ttaa---aaaaattagctga-------------------------------------------------------gcatgttggtgcgcacctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggagg-cagaagttgcagtgagccgagatcacaccact--------gcactccagcctgggtgacagaatgagactctgtc-tcaa------aaataaataaataaat-aaataaataaggcaaaagttgtttgtctctttaaagactaagcctgtaattgacacagtgtctcttcttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102628426 1289 - 106955855 ATAAAAAGGCttatagattaaatcatattatatctgaggtttactttaaaatactccagcagaaaatttaaaatagacttgggggAGGGGACTTATCTGTAGTTATCTGCACATAATCTACATGATTATCTCAAAGCCATCCTTTTGCTGTTGagaattctgacttttagctgggcccattggcacccaggtaaaaaa-ctacattcttcaatgttacttacaggtagatgtaaccgtaagtcttcatctaggacaatgatatataag----aatattgtagacagcttccaaaaggttctttaatgaagtacactttccttccttcatttaactgcctaaaatgtggatgtgatgactgatactctagcgtcatcttggaccatgaagatgag-----gttcaagatggtggggggtgagccagaagtaacttaggtccataatgctttttagagtcattgtaccagccctggactgctcccttcagatttattctacataggggagaaatcagttggtgttagttttaagtcatcattatttagttctctCTTGGAtttaggttatcaattactgtg-taacaaaccaccccaaaactgagtgacttagagtaacaatctt------tttttttttttttttaatcattcctgatctggtgagatgactgggctcagctg-gcggttcttcagctcaatgtgatgtcttcctgggcttcagtcatcagggtggctcaactgagctggattctccaagatggcacttgcaaatggctggctattgatgctggatgttggttgagagttcggctaggactgttgaatgatgtatctgcacatggcctttccatttgattcaaacttcttggaggatagcttctgggtttcaagaggggatgtcataagaaagctttctaaaatagagaaggcagctgggcatggtggctcacgtctgtaatcccagcactttgggaggccgaggtgggtggattacttgaggtcaggagttcaacattagcctggccaacatggtgaaaccctgtctctactaaaaata-----------------------------------------------------aaaattagccgg-------------------------------------------------------gtgtgttggtgcacacctgtaatcccagctactcaggaggccgaggcaggagaattgcttgaacctgggagg-cggaggttgcagtgagctgagatcacaccact--------gcactccagcctgggcgacagaatgagactctgtc-tcaaataaataaataaataaataaataaaataaagaaggcaaaagttgtttgtccctttaaagactaagcctggaactgacacagtgtctcttcttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59916562 1309 + 64156825 ATAAAAAGTCttgtagatgaaatcatattatatctgaggtttactctaaaatactccagcagaaaatttaaaatagacttgggggAGGGGACTTACCTGTAGTTATCTGCACATAATCTACATGATTACCTCAAAGCCATCCTTTTGCTGTTGagaattctgatttttagctgggcccattgctacccaggtaaaaaagctactttcttcaatgtcacttacagatagatgtagctgtaagtcttcatctaggacaatgatatataagcataaa---tgtagacagcttccaaaagattctttaatgaagtacactttccttccttcacttaactgcctaaaatgtggatgtgatgactgatactctagcatgatcttggaccatgaagatgag-----gttcaagatggtggagggtgagccacaagtaacttaggtccataatgctttttagagtcattgtgccagccctggaccgct------agatttattctacataggggagaaatcaattggtattggttttaagtcatcattatttAATTCTCTCTTGGGTATAgattacccattactgtg-taacaaaccaccccaaaactgagtgacttagggtaacaatc---------ttttttttttttttaatcattcctgatctggtgagatgactgggctcagttgagcagttcttcggctcaatgtgatatcttcctgggcttcagtcatcagtggggctcagctgagctggaatctccaag-------------atggctggctgttgatgctggatgttggttgagagctcagctaggactgttgaatgatgtacctgcacatggcctctccatttgattcagacttcttggagggtagcatctgggtttcaagaggggatgtcacaagagagctttctaaaatagagaaggcagccgggcacagtggctcacgcctgtaatcccagcactttgggaggccaaggtgggtggatcacttgaggtcaggagttcaacatcagcctggccaacatgaggaaacatcatctctactaaaaaaaaaaa------------------------------------------------taaaattagccagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn----------------------tcccagctactcaggaggctgaggcaggagaatcacttgaacctggggggacagaggctgcaatgtgctgagattaagccactgcactccagcactccagcctgagtgacagagcaaga---tgtcttgaa------aaaaaaaaaaaaaagagagagagagaaggcaaaagttgtttgtccctttaaagactaagcctggaactgacacagtgtctcttcttc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54936022 1313 + 59248254 ATAAAAAGTCTTGTAGATGAAAGCATATTATATCTGAGGTTTACTCTAAAATACTCCAGCAGAAAATTTAAAATAGACTTGGGGGAGGGGACTTACCTGTAGTTATCTGCACATAATCTACATGATTACCTCAAAGCCATCCTTTTGCTGTTGAGAATTctgatttttagctgggcccattgctacccaggtaaaaaagctactttcttcaatgtcacttacagatagatgtagctgtaagtcttcatctaggacaatgatatataagcataaa---tgtagacagcttccaaaaggttctttaatgaagtacactttccttccttcacttaactgcctaaaatgtggatgtgatgactgatactctagcatgatcttggaccatgaagatgag-----gttcaagatggtggagggtgagccacaagtaacttaggtccataatgctttttagagtcattgtgccagccctggaccgct------agatttattctacataggggagaaatcaattggtattggttttaagtcatcattatttAATTCTCTCTTGGGTATAgattaccaattactgtg-taacaaaccaccccaaaactgagtgacttagggtaacaatc--------tttttttttttttttaatcattcctgatctggtgagatgactgggctcagttgagcagttcttcggctcaatgtgatatcttcctgggcttcagtcatcagtggggctcaactgagctggaatctccaag-------------atggctggctgttgatgctggatgttggttgagagctcagctaggactgttgaatgatgtacctgcacatggcctctccatttgattcagacttcttggagggtagcatctgggtttcaagaggggatgtcacaagagagctttctaaaatagagaaggcagccgggcacagtggctcacgcctgtaatcccagcactttgggaggccaaggtgggtggatcacttgaggtcaggagttcaacatcagcctggccaacatgaggaaacatcatctctactaaaaaaaaaaa-----aaaattagccaggcggaaccctgtctctactaaaattaaaaataaaaattagccag-------------------------------------------------------gcatgttggtgcacacctgtaatcccagctactcgggaggccgaggcaggagtattgcttaaacctgggagg-cagaggttgcagtgagccgagataacaccagt--------gcactccagcctgggcaacagaaagagactctgtc-tgga------aaaaaaaaaaaagagagagagagagaaggcaaaagttgtttgtccctttaaagactaagcctggaactgacacagtgtctcttcttc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46763480 1320 + 50890351 ATAAAAAGTCttgtagatgaaatcatattatatctgaggtttactctaaaatactccagcagaaaatttaaaatagacttgggggAGGGGACTTACCTGTAGTTATCTGCACATAATCTACATGATTACCTCAAAGCCATCCTTTTGCTGTTGAGAATTctgatttttagctgggcccattgctacccaggtaaaaaagctactttcttcaatgtcacttacagatagatgtagctgtaagtcttcatctaggacaatgatatataagcataaatattgtagacagcttccaaaaggttctttaatgaagtacactttccttccttcacttaactgcctaaaatgcggatgtgatgactgatactctagcatgatcttggaccatgaagatgag-----gttcaagatggtggagggtgagccacaagtaacttaggtccataatgctttttagagtcattgtgccagccctggaccact------agatttattctacataggggagaaatcaattggtattggttttaagtcatcattatttAATTCTCTCTTGGGTACAgattatcaattactgtg-taacaaaccaccctaaaactgagtgacttagggtaacaatc--------tttttttttttttttaatcattcctgatctggtgagatgactgggctcagttgagcggttcttcggctcaacgtgatatcttcctgggcttcagtcatcagtggggctcaactgagctggaatctccaag-------------atggctggctgttgatgctggatgttggttgagagctcaactaggactgttgaatgatgtacctgcacatggcctctccatttgattcagacttcttggagggtagcatctgggtttcaagaggggaagtcacaagagagctttctaaaatagagaaggcggccgggcacagtggctcacgcctgtaatcccaacactttgggaggccaaggtgggtggatcacttgaggtcaggagttcaacatcagcctggccaacatgaggaaacatcatctctactaaaaaaaaaaaaaaaaaaaattagccaggcggaaccctgtctctactaaaattaaaaataaaaattagctgg-------------------------------------------------------gcatgttggtgcacacctgtaatcccagctactcgggaggccgaggcaggagtattgcttaaacctgggagg-cagaggttgcagtgagccgagataacaccatt--------gcactccagcctgggcaacagaaagagactctgtc-tgaa------aaaaaaaaaaaaaaaaaag-gagagagagcaaaagttgtttgtccctttaaagactaagcctggaactgacacagtgtctcttcttc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I e papAnu2.chr19 47051879 1727 + 51301725 I a score=46193.000000 s hg38.chr19_GL949747v2_alt 59605 18 + 729520 tacagtcttaaggaaagg s panTro4.chr19 58993382 18 + 63644993 tacagtcttaaggaaagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55869711 18 + 60714840 tacagtctTAAGGCAAGG i ponAbe2.chr19 C 0 M 200 s nomLeu3.chr10 102629715 18 - 106955855 tacagtcttaaggaaagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59917871 18 + 64156825 tacagtcttaaggaaagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54937335 18 + 59248254 tacagtcttaaggaaagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47053606 18 + 51301725 TACAGTCTTAAGGAAAgg i papAnu2.chr19 I 1727 C 0 s chlSab2.chr6 46764800 18 + 50890351 tacagtcttaaggaaagg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I a score=258494.000000 s hg38.chr19_GL949747v2_alt 59623 135 + 729520 ccagattcaaggggagggaaaataaactctacctctctatagggacagtgacaaagaattggaggccatctttagtctgtcaTGTGTTATGGTCAATGGAAATAGATATATATATATTtactgagtgcctgagtc s panTro4.chr19 58993400 135 + 63644993 ccagattcaaggggagggaaaataaactctatctttctatagggacagtgacaaagaattggaggccatctttagtctgtcaTGTGTTATGGTCAATGGAAATAGATATATGTATATTtactgagtgcctgagtc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102629733 135 - 106955855 ccagattcaaggggagggaaaataaactctacctctctatagggacagtgacaaagaattgggggccatctttagtctgtcaTGTGTTATGGTCAATGGAAATAGATATATGTATATTtactgagtgcctgaatc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59917889 135 + 64156825 ccagattcaaggggagggaaaataaactctacctctctatagggacagtgacaaagaattgggggccatctttagtctgccaTGTGTTACGGTCAATGGAAATAGATATATGTATATTtactgagtgcctgagtc i rheMac3.chr19 C 0 I 283 s macFas5.chr19 54937353 135 + 59248254 ccagattcaaggggagggaaaataaactctacctctctatagggacagtgacaaagaattgggggccatctttagtctgccaTGTGTTACGGTCAATGGAAATAGATATATGTATATTtactgagtgcctgagtc i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47053624 135 + 51301725 ccagattcaaggggagggaaaATAAACTCTACCTCTCTATAGGGACAGTGACAAAGAATTGGGGGCCATCTTTAGTCTGCCATGTGTTACGGTCAATGgaaatagatatatgtatatttactgagtgcctgagTC i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46764818 135 + 50890351 ccagattcaaggggagggaaaataaattatacctctctatagggacagtgacaaagaattgggggccatctttagtctgccaTGTGTTACGGTCAATGGAAATAGATATATATATATTtactgagtgcctgagtc i chlSab2.chr6 C 0 I 1 e canFam3.chr1 19564854 888 - 122678785 I e ponAbe2.chr19 55869729 200 + 60714840 M e calJac3.chr22 45331758 716 + 49145316 I a score=14659.000000 s hg38.chr19_GL949747v2_alt 59758 23 + 729520 ccaccgagagattttaattattt s panTro4.chr19 58993535 23 + 63644993 ccaccgagagattttaattattt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102629868 23 - 106955855 ccacccagagattttcatttttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54937489 23 + 59248254 acccccagagattttaaattttt i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47053760 20 + 51301725 ACCCCcagagatttaaaatt--- i papAnu2.chr19 I 1 I 1 s chlSab2.chr6 46764954 20 + 50890351 acccccagagattttaaatt--- i chlSab2.chr6 I 1 I 1 e canFam3.chr1 19564854 888 - 122678785 I e ponAbe2.chr19 55869729 200 + 60714840 M e calJac3.chr22 45331758 716 + 49145316 I e rheMac3.chr19 59918024 283 + 64156825 I a score=4658.000000 s hg38.chr19_GL949747v2_alt 59781 7 + 729520 ttttatt s panTro4.chr19 58993558 7 + 63644993 ttttatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55869929 7 + 60714840 ttttatt i ponAbe2.chr19 M 200 C 0 s nomLeu3.chr10 102629891 7 - 106955855 atttatt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54937512 7 + 59248254 ttttttt i macFas5.chr19 C 0 I 278 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I e chlSab2.chr6 46764974 1 + 50890351 I e papAnu2.chr19 47053780 1 + 51301725 I e rheMac3.chr19 59918024 283 + 64156825 I a score=-411.000000 s hg38.chr19_GL949747v2_alt 59788 4 + 729520 tttg s panTro4.chr19 58993565 4 + 63644993 tttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55869936 4 + 60714840 tttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102629898 3 - 106955855 tat- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54937797 3 + 59248254 ttt- i macFas5.chr19 I 278 C 0 s papAnu2.chr19 47053781 3 + 51301725 ttt- i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46764975 3 + 50890351 ttt- i chlSab2.chr6 I 1 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I e rheMac3.chr19 59918024 283 + 64156825 I a score=4745433.000000 s hg38.chr19_GL949747v2_alt 59792 2010 + 729520 tttttttaagatggaattttgctcttgttgcccaggctgaagtgcaatggcatgatctcagctcactgcaacc-tctgcctcccgggttcaagcgattctcctgcctcagcctcccaagtagctcggattacaggcaagtgccaccacacccagttaattttgtattttttagtagagatgggatttctccatgttggtcaggctggtcttgaactcttgacctcaggtgatctgcccaccttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccagtcgagattttaatttttataatgggtataggatgaggcctgggtgtctcattctgtgttttaaatgttcctgggaaattctaatgtgcagtcaagtttgagaaccactgGGTTGgaacacataacctccttcccatctcagaccctgaaacatcctgaaaactcctgtatctggagtttttcccccatttttgcttggctaactttgactcttccctcagaaaccagcttcagaatcttttctttagcaaagacttccctgCAAGTTCTTTAACAGCACTTATCTCAGCTGTGACAAAATCATCAATGGTGTAATTGTGTCTTTTTAATGTCTTTTCCCCTATTCTTCATAATCGTCAAAGTAAAGGATAGCTCTTCTCTCAGTCAGAACTATTAATAGATGCTGTAATGGAAATGAAACAAGACTCTCAGACTC-TTGTTAAAGTAAGAAGTCTAGCAGAGTCTCAGGCTTTAA---TTTTTTTTTTCCGATCATAAATGTGGGAGAAAGATCATTTAACCTGCtgctaaggtttgaatatttgttcccttgaaaactcatgttgaaccagcctgggcaacatagggagaccctgtctctacaaataatttaaaaattagccaggtgaggtggcacatgcctgtgatcccagctactcaggaggctgaagtgggaggatcacctgagcccagaaagctgaggatgcagtgaaccgtgattgcaccactgcactccagcctgtgcaacacagtgagaccctgtctcaaaaaataaaTAGGTAAATAAgctgagtgtggtggctcacacctgtaatctcagcactttaggaagccaaggtgggcagatcacatgaggtcaggagtttgagactagctggccaacatgatgaaaccctgtctctactaaaaatacaaaaattacccgggcatggtggcacgtgcctgtaataccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttataatgagctgagatcatgccactgctgtccagcctgggtgacatagcaagacattgtctcaaaaaatacataaataaat---------aataaataaaTaaacttatggtgaaactgaatccctaatgtggccgtattgataggtcgggcatttaagaggtgattgggtcatgaggactcttttctcatgaatgaactaatccattcatggattaatggattagtgagttaatggattaatgggttaccctgggagtgagactggtggctttatcagaagaggaagagagacttaagtagcacgctcagctcttttgccctgtgatgccctgtgccacctcggaaccctccagagagt--------------ccccaacagcaagaaggtcctcaccagatgcagcccctccaccttggactttccaacctccattaactacaggaaataaattccttttctttataagttatctggcttcaagtgttctgttctaagcaacagaatacagactaagacaCAGACACCAATGCATAGCTTCTGATTTAACAGAATTGTTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAATCATAAGATTGTTACCAGGGCAACAAAATATTAAGTAAGACCACCAAATGGCACCAAGGTTTCTCCTTCAAAATAATGATTGCAATACTGGCAATAATTTCTAATGTCTTTGGACTCCTACAAGATTATTTTGTGCAAATTACA s panTro4.chr19 58993569 2012 + 63644993 tttttttaagatggaattttgctcctgttgcccaggctgaagtgcaatggcatgatctcagctcaccgcaacc-tctgcctcccgggttcaagcaattctcctgcctcagcctcccaagtagctcggattacaggcaagtgccaccacacccagttaattttgtattttttagtagagataggatttctccatgttggtcaggctggtcttgaactcttgacctcaggtgatctgcccgccttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccagtcgagattttaatttttacaatgggtataggatgaggcctgggtgtctcattctgtgttttaaatgttcctgggaaattctaatgtgcagtcaagtttgagaaccactgGGTTGgaacacataacctccttcccatctcagaccctgaaacatcctgaaaactcctgtatctggagtttttcccccatttttgcttggctaactttgactcttccctcagaaaccagcttcagaatcctttctttagcaaagacttccctgCAAGTTCTTTAACAGCACTTATCTCAGCTGTGACAAAATCATCAATGGTGTAATTGTGTCTTTTTAATGTCTTTTCCCCTATTCTTCATAATAGTCAAAGTAAAGGATAGCTCTTCTCTCAGTCAGAACTATTAATAGATGCTGTAATGGAAATGAAACAAGACTCTCAGACTC-TTGTTAAAGTAAGAAGTCTAGCAGAATCTCAGGCTTTAAATTTTTTTTTTTTCTGATCATAAATGTGGGAGAAAGATCATTTAACCTGCtgctaaggtttgaatatttgttcccttgaaaactcatgttgaaccagcctgggcaacatagggagaccctgtctctacaaataatttaaaaattagccaggtgaggtggcacatgcctgtgatcccagctactcaggaggctgaagtgggaggatcacctgagcccagaaagctgaggatgcagtgaaccgtgattgcaccactgcactccagcctgtgcaacacagtgagaccctgtctcaaaaaataaatagataaataaGCTCAgtgtggtggctcacacctgtaatctcagcactttaggaagccaaggtgggcagatcacatgaggtcaggagtttgagactagctggccaacatgatgaaaccctgtctctactaaaaatacaaaaattacccgggcatggtggcacgtgcctgtaataccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttataatgagctgagatcatgccactgctgtccagcctgggtgacatagcaagacattgtctcaaaaaatacataaataaat---------aataaataaataaacttatggtgaaactgaatccctaatgtggccatatggataggtggggcatttaagaggtgatcgggtcatgaggactcttttctcatgaatgaactaatccattcatggattaatggattagtgagttaatggattaatgggttaccctgggagtgagactggtggctttatcagaagaggaagagagacttaagtagcacgctcagctcttttgccctgtgatgccctgtgccacctcggaaccctccagagagt--------------ccccaacagcaagaaggtcctcaccagatgcagcccctccaccttggactttccaacctcca-taactacaggaaataaattccttttctttataagttatctggtttcaagtgttctgttctaagcaacagaatacagactaagacaCAGACACCAATGCATAGCTTCTGATTTAACAGAATTGTTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAATCATAAGATTGTTACCAGGGCAACAAAATATTAAGTAAGACCACCAAACGGCACCAAGGTTTCTCCTTCAAAATAATGATTGCAATACTGGCAATAATTCCTAACGTCTTCGGACTCCTACAAGATTATTTTGTGCAAATTACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55869940 2013 + 60714840 tttttttaagatggaattttgctcctgttgcccaggctgaagtgcaatggcatgatctcagctcaccgcaacc-tctgcctcccaggttcaagcaattctcctgcctcagcctcccaagtagctcggattataagcatgtgccaccacacccggttaattttgtattttttagtagagatggggtttctccatgttggtcaggctggtcttgaactcttgacctcaggtgatctgcccacattggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccagtcAagattttaatttttataatgggtataggatgaggcctgggtgtctcatcgtgtgttttaaatgttcctgggagattctaaggtgcagtcaactttgagaaccactCGGTTGgaacacacaacctccttcccatctcaggcccggaaacatcctgaaaactcctgtatctggagttgttcccccatttttgcttggctaactttgactcttccctcagaaaccagcttcagaatcctttctttagcaaagacttccctgCAAGTTCTTTAAAAGCACTTATCTCAGCTGTGACAAAATCATCAATGGTGTAATTGTGTCTTTTTAATGTCTTTCCCCCTATTCTTCATAATAGTCAAAGTAAAGGATAGCTCTTCTCTCAGTCAGAACAATTAATAGATGCTGTAATGGAAATGAAACAAGACTCTCAGACTC-TTGTTAAAGTAAGAGGTCTAGCAGAGTCTCAGGCTTTAATTTTTTTTTTTTTCCGATCATAAATGTGGGAGAAAGATCATTTAACCTGCtgctaaggtttgaatatttgttcccttgaaaactcatgttgaaccagcctgggcaacatagggagaccctgtctctacaaa----ttaaaaattagccaggtgaggtggcacacgcctgtgatcccagctactcaggaggctgaagtgggaggatcacctgagcccagaaagctgaggatacagtgaaccgtgattgcaccactgcactccagcctgtgcaacagagtgagaccctgtctcaaaaaataaatagataaaTAagctgagtgtggtggctcacacctgtaatctcagcactttgggaggccaaggtgagcagatcacatgaggtcaggagtttgagactagctggccaacatgatgaaaccccgtctctactaaaaatacaaaaattacctgggcatggtggcatgtgcttgtaataccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttataatgagctgagatcaagccactgctgtccagcctgggtgacatagcaagacATTGTCtaaaaaaataaataaacaaataaataaataaataaataaataaacttatggtgaaattgaatccctaatgtggccgtattgataggtggggcatttaagaggtgattgggtcatgaggactcttttctcatgaatgaactaatccattcatggattaatggattagtgagttaatggattaatgggttaccctgggaatgagactggtggctttatcagaagaggaagaga----caagtagcacgctcagctcctttgctctgtgatgccctgtgccacctcagaaccctccagagagt--------------ccccaacagcaagaaggtcctcaccagatacagcccctccaccttggactttccaacctcca-taactacaggaaataagttccttttctttataagttttctggtttcaactgttctgttctaagcaacagaacacagactaagacaCACACACCAATGCACAGCTTCTGATTTAACAGAATTGTTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAATCATAAGATTGTTACCAGGGAAACAAAATATTAAGTAAGACCACCAAACGGCACCAAGATTTCTCCTTCAAAATAATGATTGCAATACTGGCAATAATTTCTAATGTCTTTGGACTCCTACAAGATTATTTTGTGCAAATTACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102629901 1988 - 106955855 tgtttttaagatggagttttgctcttgttgcccaggctgaagtgcaatggcatgatcttagctcacggaaaccttccaccttccaggttcaagcgatcctcctgcctcagcctcccgagtagcttggattacaggcatgtgccaccacacccggttaattttgtattttttagtagagatggggtttctccatgttggtcaggcaggtcttgaactcttgacctcaggtgatacgcccgccttggcctcccaaagtgctgggattacaggtgtgagccaccacgcccaaccgagattttaatttttataatgggtataggatgaggcctgggtgtctcattctgtgttttaaatgttcctgggatattctcatgtgcagtcaagtttgagaaccactgGGTTGgaacacataacctccttcccatctcaggc----------cctgaaaactcctgtatctggagtttttcccccagttttgcttggctaactttgactcttccatcagaaaccagcttcagaatcctttctttagcaaagacttcgctgCAAGTTCTTTAACAGCACTTATCTCAGCTGTGACAAAATCATCAATGGTGTAATTGTGTCTTTTTAATGTCTTTCCCCC-ATTCTTCATAATAGTCAAAGTAAAGGATAGCTCTTCTCTCAGTCAGAACTATTAATAGATGCTGTAATGGAAATGAAACAAGACTCTCAGACTC-TTGATAAAGTAAGAAGTCTAGCAGAGTCTCAGGCTTTAAA--TTTTTTTTTTCCAATCATAAATGTGGGAGAAAGATAATTTAATCTGCTGCTAAGGTCTG-ATATTTGTTCCCTTGAAAACTCACGTTGAaccagcctgggcaacatagggagaccctgtctctacaaataatttaaaaattagccaggtgaggtggcacatgcctgtgatcccagctactcaggaggctgaagtgggaggatcacctgagcccagaaagctgaggatgcagtgaaccgtgactgcaccactgcactccagcctgtgcaacagagtgagaccctgtctcaaaaaataaatagataaataagctgagtgtggtggctcacacttgtaatctcagcactttgggaggccgaggtggacagatcacatgaggtcaggagtttgagactagctggccaacatgatgaaaccctgtctctactgaaaatacaaaaattacccgggcatggtggcatgtgcctgtaataccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttacagtgagctgagatcatgccactgctgtccagcctgggtgacatagcaagacattgtctcaaaaaatacataaataaat--------------------aaacttatggtgaaattgaatccctaatgtggctgtattgataggtggggcacttaagaggtgaatgtgtcatgaggactcttttattatgaatgaactaatccattcatggattaatggattagtgagttaatggattaatgggttaccctgggagtgagactggtggctttatcagaagaggaagagagaattaagtagcacgctcagctccttttccctgtgatgccctgtgccagctcggaaccctccagagagt--------------ccccaacagcaagaagttcctcaccagatgcagtccctccaccatggactttccaacctcca-taactacaggaaataaattccttttctttataagttttctggtttcaagtgttctgttctaagcaacagaatacagactaagacaCACACACCAATGCACAGCTTCTGATTTAACAGAATTGTTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAATCATAAGATTGTTACCAGGGCAACAAAATATTAAGTAAGATCACCAAACGGCACCAAGGTTTCTCCTTCAAAATAACGATTGCAATACTGGCAATAATTTCTAATGTCTTTGGACTCCTACAAGATTATTTTGTGCAAATTACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59918307 2001 + 64156825 ttttttttagatggagttttgctcttgttgcccaggctggagtgcaatggcataatctcggctcaccacaaca-tccacctcccaggttcaagcgattttcctgcctcagcctcccgagtagctgggattacaggcgtgcgccaccgcgcccggctaatgttgtattttttagtagagatggggtttctccatgttggtcaggctggtcttgaactcctgacctcaggtgatccgcctgtgttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccagcT--gattttaatttttataatgggtacaggatgaggcctaggtgtctcattctgtgttttaaatgttcctgggagattctcatgtgccgtcaaatttgagaaccactCGGTTGgaacacataacctccttcccatctcagtccctgaaacaa--tgctatttcctgtatctggagtttttcccccatttttgcttggctaacttggactcttccctcagaaaccagcttcagaatcctttctttagcaaagacttccctgCATGTTCTTTAACAGCACTTATCTCAGCTACAACAAAATCATCAGTTGTGTAATTGTGTCTTTTTAACGTCTTTTCCCCCTTTCTTCATAATAGTCAAAGTGAAGGATGGCTCTTATCTCAGTCAGAACTATTAATAGATATTGTAATGGAAATGAAACAAGACCTTCAGACTC-TTCTTAAAGTAAGAAGTCTAGCAGAGTCTCGGGCTTTAAATTTTTTTTTTTTCCGATCATAAATGTGGGATAAAGATAATTTAAACTGCtgctaaggtttgaatatttgttcccttgaaaactcatgttgaaccagcctgggcaacatcaggaga-cctgtctctataaataatttaaaaattagccaggtgaggtggcacatgcctgtgatctcagctactcaggaggctgaagtgggaggatcacctgagcccagaaagctgacaatgcagtgagccgtgactgcaccactgaactccagcctgtgcaacagagtgagaccctgtctcaaaatataaatagataaataagctgagtgcggtggctcacacctgtaatctcagcactttgggaggccaaggtgggcagatcacatgaggtcaggagtttgagaccaaccggccaacatgatggaaccccgtctctactaaaaatacaaaaattacccgggcatggtggcacgtgcctgtaatacgaactacgcaggaggctgaggcaggaaaatcacttgaacctgggaggtggaggttacagtgagctgagatcatgccactgctctccagcctgggtgacatagcaagacgttgtctcaaaaaatacataaataaa----------------------aacttatggtgaaattgaatccccaatgtggcagtattgagaggtggggactttaagaggtgattgggtcatgaggactcttttctcatgaatgaactaatccattcatggattaatggattagtgagttaatggattcatgggttaccctgggagtgagactggtggctttatcagaagaggaagagagacttgagtagcacgctcagctcctttgccctgtgatgccttgtgccacctcaggaccctccagagagtcccgagtcttcttgccccaacagcaagaaggccctcaccagatgcagcccctccaccttggacttcccaacctcca-caactacaggaaataaattccttttctttacaa-------cgtttcaagtattctgttctaagcaacggaatacggactaagacaCACACACCAATGCACAGCTTCTCATTTAACAGAATCGGTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAGTCATAAGATTGTTACTAGGGCAACAAAATATTAAGTAAGACCACCAAATGGCACCAAGGTTTCTCCTTCATAATAATGATTGCAATACTGGCAATAATTTCTAATGTCTTCGGACTCCTACAAGGTTATTTTGTGCAAATTACA i rheMac3.chr19 I 283 C 0 s macFas5.chr19 54937800 2001 + 59248254 ttttttttagatggagttttgctcttgttgcccaggctggagtgcaatggcataatctcggctcaccacaaca-tccacctcccaggttcaagcgattttcctgcctcagcctcccgagtagctgggattacaggcgtgcgccaccgcgcccggctaatgttgtattttttagtagagatggggtttctccatgttggtcaggctggtcttgaactcctgacctcaggtgatccgcctgtgttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccagct--gattttaatttttataatgggtacaggatgaggcctaggtgtctcattctgtgttttaaatgttcctgggagattctcatgtgccgtcaaatttgagaaccactCGGTTGgaacacataacctccttcccatctcagtccctgaaacaa--tgctatttcctgtatctggagtttttcccccatttttgcttggctaacttggactcttccctcagaaaccagcttcagaatcctttctttagcaaagacttccctgCATGTTCTTTAACAGCACTTATCTCAGCTACAACAAAATCATCAGTTGTGTAATTGTGTCTTTTTAACGTCTTTTCCCCCTTTCTTCATAATAGTCAAAGTGAAGGATGGCTCTTATCTCAGTCAGAACTATTAATAGATATTGTAATGGAAATGAAACAAGACCTTCAGACTC-TTCTTAAAGTAAGAAGTCTAGCAGAGTCTCGGGCTTTAAATTTTTTTTTTTTCCGATCATAAATGTGGGATAAAGATAATTTAACCTGCtgctaaggtttgaatatttgttcccttgaaaactcatgttgaaccagcctgggcaacatcaggaga-cctgtctctataaataatttaaaaattagccaggtgaggtggcacatgcctgtgatcccagctactcaggaggctgaagtgggaggatcacctgagcccagaaagctgacaatgcagtgagccgtgactgcaccactgaactccagcctgtgcaacagagtgagaccctgtctcaaaaaataaatagataaataagctgagtgcggtggctcacacctgtaatctcagcactttgggaggccaaggtgggcagatcacatgaggtcaggagtttgagaccaaccggccaacatgatggaaccccgtctctactaaaaatacaaaaattacccgggcatggtggcacgtgcctgtaatacgaactactcaggaggctgaggcaggaaaatcagttgaacctgggaggtggaggttacagtgagctgagatcatgccactgctctccagcctgggtgacatagcaagacgttgtctcaaaaaatacataaataaa----------------------aacttatggtgaaattgaatccccaatgtggcagtattgagaggtggggactttaagaggtgattgggtcatgaggactcttttctcatgaatgaactaatccattcatggattaatggattagtgagttaatggattcatgggttaccctgggagtgagactggtggctttatcagaagaggaagagagacttgagtagcacgctcagctcctttgccctgtgatgccttgtgccacctcaggaccctccagagagtcccgagtcttcttgccccaacagcaagaaggccctcgccagatgcagcccctccaccttggacttcccaacctcca-caactacaggaaataaattccttttctttacaa-------cgtttcaagtattctgttctaagcaacggaatacggactaagacaCACACACCAATGCACAGCTTCTCATTTAACAGAATCGGTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAGTCATAAGATTGTTACTAGGGCAACAAAATATTAAGTAAGACCACCAAATGGCACCAAGGTTTCTCCTTCATAATAATGATTGCAATACTGGCAATAATTTCTAATGTCTTCGGACTCCTACAAGGTTATTTTGTGCAAATTACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47053784 2002 + 51301725 ttttttttagatggagttttgctcttgttgcccaggttggagtgcaatggcataatctcagctcaccacaaca-tccacctcccaggctcaagcgattttcctgcctcagcctcccgagtagctgggattacaggcgtgcgccaccgcacccagctaatgttgtattttttagtagagatggggtttctccatgttggtcaggctggtcttgaactcctgacctcaggtgatccgcctgtgttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccggct--gattttaatttttataatgggTACAGGATGAGGCCTAGGTGTCTCATTCTGTGTTTTAAATGTTCCTGGGAGATTCTTATGTGCCgtcaaatttgagaaccactcgGTTGGAACACATAACCTCCTTCCCATCTCAGGCCCTGAAACAA--TGCTATTTCCTGTATCTGGagtttttcccccatttttgCTTGGCTAACTTGGACTCTTCCCTCAGAAACCAGCTTCAGAATCCTTTCTTTAGCAAAGACTTCCCTGCATGTTCTTTAAGAGCACTTATCTCAGCTACAACAAAATCATCAGTTGTGTAATTGTGTCTTTTTAACgtcttttccccctttcttcaTAATAGTCAAAGTAAAGGATGGCTCTTATCTCAGTCAGAACTATTAATAGATATTGTAATGGAAATGAAACAAGACCTTCAGACTCATTCTTAAAGTAAGAAGTCTAGCAGAGTCTTgggctttaaa--ttttttttttccgatCATAAATGTGGGATAAAGATAATTTAACCTGCTGCTAAGGTTTAAATATTTGTTCCCTTGAAAACTCATgttgaaccagcctgggcaacatcaggaga-cctgtctctacaaataatttaaaaattagccaggtgaggtggcacatgcctgtgatcccagctactcaggaggctgaagtgggaggatcacctgagcccagaaagcTGAcgatgcagtgagccgtgactgcaccactgaactccagcctgtgcaacacagtgagaccctgtctcaaaaaataaatagataaataagctgagtgcggtggctcacacctgtaatctcagcactttgggaggccaaggtgggcagatcacatgaggtcaggagtttgagaccaaccggccaacatgatggaaccccatctctactaaaactacaaaaattacctgggcatggtggcacgtgcctgtaatacgaactactcaggaggctgaggcaggaaaatcacttgaacctgggaggtggaggttacagtgagctgagatcatgccactgctctccagcctgggtgacatagcaagacgttgtctcaaaaaatacataaataaat--------------------gaacttaTGGTGAAATtgaatccccaatgtggcagtattgagaggtggggactttaagaggtgattgggtcatgaggacTCTTTTCTCATGAATGaactaatccattcatggattaatggattagtgagttaatggattaatgggttaccCTGGGAGTGAGACTGGTGGCTTtatcagaagaggaagagagacttgAGTAGCACGCTCAGCTCCTTTGCCCTGTGATGCCCTGTGCCACCTCGGGACCCTCCAGAGAGTCCCGAGTCTTCTTGCCCcaacagcaagaaggccctcaccagatgcagcccctccagcttggacttcccaacctcca-caACTAcaggaaataaattccttttctttacaa-------CGTTTCAAGTATTCTGTTCTAAGCAACGGAATACGGACTAAGACACACACACCAATGCACAGCTTCTCATTTAACAGAATCGGTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAGTCATAAGATTGTTACTAGGGCAACAAAATATTAAGTAAGACCACCAAATGGCACCAAGGTTTCTCCTTCATAATAATGATTGCAATACTGGCAATAATTTCTAATGTCTTCGGACTCCTACAAGGTTATTTTGTGCAAATTACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46764978 1993 + 50890351 -tttttttagatagagttttgctcttattgcccaggctggagtgcaatggcataatctcggctcaccacaaca-tccgcctcccaggctcaagcgattttcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccgcacctggctaatgttgtattttttagtagagatagggtttctccatgttggtcaggctggtcttgaactcctgacctcaggtgatccgcctgtgttggcctcccaaagtgctgggattacaggtgtgagccaccgcgcctggct--gattttaatttttataatgggtataggatgaggcctaggtgtctcattctgtgttttaaatgttcctgggagattctcacgtgctgtcaaatttgagaaccactCGGTTGgaacacataacctccttcccatctcaggccctgaaacaa--tgctatttcctgtatctggagtttttcccccatttttgcttggcaaacttggactcttccctcagaaaccagcttcagaatcctttctttagcaaagacttccctgCATGTTCTTTAACAGCACTTGTCTCAGCTACAACAAAATCATCAGTTGTGTAATTGTGTCTTTTTAACGTCTTTTCCCCCTTTCTTCATAATAGTCAAAGTGAAGAATGGCTCTT-----AGTCAGAACTATTAATAGATATTGTAATGGAAATGAAACAAGACCTTCAGACTC-TTCTTAAAGTAAGAAGTCTAGCAGAGTCTCGGGCTTTAAA--TTTTTTTTTCCCGATCATAAATGTGGGATAAAGATAATTTAACCTGCtgctaaggtttgaatatttgttcccttgaaaactcatgttgaaccagcctgggcaacatcaggaga-cctgtctctacaaataatttaaaaattagccaggtgaggtggcacatgcctgtgatcccagctacttaggaggctgaagtgggaggatcacctgaacccagaaagctgacgatgcagtgagccgtgactgcaccactgaactccagcctgtgcaacagagtgagaccctgtctcaaaaaataaaTAGATACATAAgctgagtgcggtggctcacgcctgtgatctcagcactttgggaggccaaggtgggcagatcacatgaggtcaggagtttgagaccaactggccaacatgatggaaccccgtctctactaaaaatacaaaaattacccgggcatggtggcacgtgcctgtaatacgaactactcaggaggctgaggcaggaaaatcacttgaacctgggaggtggaggttacagtgagctgagatcatgccactgctctccagcctggctgacatagcaagatgttgtctcaaaaaatacataaataaaT--------------------Gaacttacggtgaaattgaatccccaatgtggcagtattgagaggtggggactttaagaggtgattgggtcatgaggactcttttctcatgaatgaactaatccattcatggattaatggattagtgagttaatggattaatgggttaccctgggagtgagactggtggctttatcagaagaggaagagagacttgagtagcacgctcagctcctttgccctgtgatgccctgtgccacctcgggaccctcc--agagtcccgagtcttcttgccccaacagcaagaaggccctcaccagatgcagcccctccaccttggacttcccaacctcca-caactacaggaaataaattccttttctttacaa-------cgtttcaagtattctgttctaagcaacggaatacggactaagacGCACACACCAATGCACAGCTTCTCATTTAACAGAATCGGTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAGTCATAAGATTGTTACTAGGGCAACAAAATATTAAGTAAGACCACCAAATGGCACCAAGGTTTGTCCTTCATAATAATGATTGCAATACTGGCAATAATTTCTAATGTCTTCGGACTCCTACAAGGTTATTTTGTGCAAATTACA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I a score=426404.000000 s hg38.chr19_GL949747v2_alt 61802 162 + 729520 CTTCAAAGCACAGATTTATGGAACCACAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTCCATACTACATAAGACTATAAAACACATTTAGAGCCTTTTTAATATTCTCAGTTTATTAACTTATCAATCCACATTCCATTTTTT----TGTTTGTTT------ s panTro4.chr19 58995581 156 + 63644993 CTTCAAAGCACAGATTTATGGAACCACAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTTCATACTACGCAAGACTATAAAACGCATTTAGAGCCTTTTTAATATTCTCAGTTTATTAACTTATCAATCCACATTCCGGTTTTT----------TTT------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55871953 159 + 60714840 CTTCAAAGGACAGATTTATGGAACCAGAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTCCATACTACACAAGACTATAAAACACATTTAGAGCCTTTTTAATATTCTCAGTTTATTACCTTATCAATCCACATTCTGTTTTTT-----GTt--ttt------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102631889 164 - 106955855 CTTCAAAGGACAGATTTATGGAACCAGAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTCCATACTACACAAGACTATAAAACACATTTAGAGCCTTTTTAATATTCTCAGTTTATTACCTTATCCATCCACATTttgttgttgttgttgtt--gtt------ i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59920308 150 + 64156825 CTTCAAAGGACAGATTTATGCAACCAGAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTCCATACTACACAAGACTATAAAACAGATTTAGAGCCTTTTGAATATTCTCAGTTTGTTACCTTATCAAACCACAttctg----------------ttt------ i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54939801 150 + 59248254 CTTCAAAGGACAGATTTATGCAACCAGAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTCCATACTACACAAGACTATAAAACAGATTTAGAGCCTTTTGAATATTCTCAGTTTGTTACCTTATCAAACCACAttctg----------------ttt------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47055786 150 + 51301725 CTTCAAAGGACAGATTTATGCAACCAGAGAATGGAACACtggctgctgtaataaatatcCATAGATCTCCATACTACACAAGACTATAAAACAGATTTAGAGCCTTTTGAATATTCTCAGTTTATTACCTTATCAAACcacattctg----------------ttt------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46766971 150 + 50890351 CTGCAAAGGACAGACTTATGCAACCAGAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTCCATACTACACAAGACTATAAAACAGATTTGGAGCCTTTTGAATATTCTCAGTTTATTGCCTTATCAAACCACAttctg----------------ttt------ i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45332474 161 + 49145316 ccCCAAAGGACAGATTTATGGAACCAGAGAATGGAACGCTGGTCGCTGTAATAAATATCCATAGATCTCCATACTACAGAAGA-TATAAAACACATTTAGAGTCTTTTGAATATTCTCAGTTTATGACCTTATCAAACCACAttctgtttttg----------tttttgttt i calJac3.chr22 I 716 I 245 e canFam3.chr1 19564854 888 - 122678785 I a score=328804.000000 s hg38.chr19_GL949747v2_alt 61964 159 + 729520 GttttgttttgtttttttactttaagttctagggtacatgtgcataatgtacaggtttgatacatgtgccatgttggtttgctccacccatcaagttatcatttacattaggtatttctcctaatgctatccctcccccagccccccaccccacTCTG-t s panTro4.chr19 58995737 159 + 63644993 GttttgttttgtttttttactttaagttctagggtacatgtgcacaatgtacagatttgatacatgtgccatgttggtttgctccacccatcaagttatcatttacattaggtatttctcctaatgctatccctcccccagccccccaccccacTCTG-t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872112 155 + 60714840 gt----ttttttttttttactttaagttctagggtacatgtgcacaatgtgcaggtttgatacatgtgccatgttggtttgctgcacccatcaacttatcatttacattaggtatttctcctaatgctatccctcccccagccccccacccATCTCtg-t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102632053 156 - 106955855 gttttgttt--tttttttactttaagttccagggtacatgtgcacaatgtgcaggtttgatacatgtgccatgttggtttgctgcacccatcaacttatcatttacattaggtatttctcctaatgctgtccct-ccccagccccccacccccctctg-t i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59920458 148 + 64156825 gt---------ttgttttactttaagttctagtgtacatgtgtacaacgtgcaggtttgatatatgtgccatgctggtttgctgcatccatcaacttatcatttacattaggta-ttctcctaatgctatcccttccccagccccccgccccCCACTG-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54939951 149 + 59248254 gt---------ttgttttactttaagttctagtgtacatgtgtacaacgtgcaggtttgatatatgtgccatgctggtttgctgcatccatcaacttatcatttacattaggtatttctcctaatgctatcccttccccagccccccgccccCCACtg-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47055936 149 + 51301725 gt---------ttgttttactttaagttctagtgtacatgtgtacaacgtgcaggtttgatatatgtgccatgctggtttgctgcatccatcaacttatcatttacattaggtatttctcctaatgctatccctcccccagccccccgccccccactg-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46767121 150 + 50890351 gt---------ttgttttactttaagttctagtgtacatgtgtacaacgtgcaggtttgatatatgtgccatgctggtttgctacatccatcaacttatcatttacattagttatttctcctaatgctatccctcccccagccccccgccccCCACtgt- i chlSab2.chr6 C 0 I 52 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=9314.000000 s hg38.chr19_GL949747v2_alt 62123 34 + 729520 tttt------------------tttttttttgttt---------ttttttttttaagacag s panTro4.chr19 58995896 24 + 63644993 tttt----------------------------tgt---------ttttttttttaagacag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872267 52 + 60714840 tttttgtttgtttgtttgtttgtttgttgttgttc---------ttttgtttttaagacag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102632209 26 - 106955855 tttt------------------tt--------ttt---------ttttttttttAAGACAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59920606 32 + 64156825 ------------------TGTGTGTGTGTGTGTGt---------ttttttttttaagac-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54940100 31 + 59248254 ------------------tgtgtgtgtgtgtgtg----------ttttttttttaagac-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47056085 41 + 51301725 ------------------tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttttaagac-- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I e chlSab2.chr6 46767271 52 + 50890351 I a score=15777.000000 s hg38.chr19_GL949747v2_alt 62157 7 + 729520 ggtctca s panTro4.chr19 58995920 7 + 63644993 ggtctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872319 7 + 60714840 ggtctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102632235 7 - 106955855 GGTCTTA i nomLeu3.chr10 C 0 I 340 s rheMac3.chr19 59920638 7 + 64156825 gatctca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54940131 7 + 59248254 gatctca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47056126 7 + 51301725 gatctca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46767323 7 + 50890351 gatctca i chlSab2.chr6 I 52 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=58123.000000 s hg38.chr19_GL949747v2_alt 62164 32 + 729520 ctgtgtcacccaggttggagtgcagtggtgtg s panTro4.chr19 58995927 32 + 63644993 ctgtgtcacccaggttggagtgcagtggtttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872326 32 + 60714840 ctgtgtcacccaggctggagtgcagtggtgtg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59920645 32 + 64156825 ctctgtcacccaggctggagtgcagtggtgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54940138 32 + 59248254 ctctgtcacccaggctggagtgcagtggtgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47056133 30 + 51301725 --ctgtcacccaggctggagtgcagtggtgtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46767330 32 + 50890351 ctctgtcacccaggctggagtgcagtggtgtg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I e nomLeu3.chr10 102632242 340 - 106955855 I a score=1340866.000000 s hg38.chr19_GL949747v2_alt 62196 589 + 729520 atctcgactcactgcaacctctgcctctcgggttcaagtgattctcttgccccagc-cctcccaagtacaaggaattacagggttgtgccaccacgccgggctaatttttgtacttttagtagagacagtgttttgccatgttggccagggctggtctcgaacttctgggcccaagtgatccgcctgcctcgacctcccaaagttctgggattacaggtgtgaaccaccatgcctcgccTAAACTACATTCTTGAATTAGTTTTATGGCACAGAATAtctttttctcctctctcaatgccctctctctctctagctccctctcctcCCCTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTCTTAAACTTCTTTTGATCAATTATAAAGAA------------ttttt--ttttttagat-ggagtctcactctgtcacccaggatggagtgcaatggcacaatctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccaagtagctgggactacaggcatgtgccactacgcccggctac-----------ttttttttttttttgtatttttagtagagacggggtt s panTro4.chr19 58995959 600 + 63644993 atctcgactcactgcaacctctgcctctcgggttcaagtgattctcttgccccagc-cctcccaagtaccaggaattacagggttgtgccaccacgcctggctaatttttgtacttttagtagagacagtgttttgccatgttggccagggctggtctcgaacttctgggcccaagtgatccgcctgcctcgacctcccaaagttctgggattacaggtgtgaaccaccatgccTCACCTAAACTACATTCTTGAATTAGTTTTATGGCACAGAATATCTTTTTCTCCTCTCTCAATGCCCTCTCTCTCTCTAGCTCCCTCTCCTCCCCTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTCTTAAACTTCTTTTGATCAATTATAAAGAA------------ttttt--ttttttagat-ggagtctcactctgtcacccaggatggagtgcaatggcacaatctcagctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccaagtagctgggactacaagcatgtgccactacgcccggctactttttttttttttttttttttttttgtatttttagtagagacggggtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872358 594 + 60714840 atctccactctctgcaacctctgcctcttgggttcaagtgattctcctgccccagc-ccccccacgtacgtggaattacagggttgtgccaccacgcctggctaatttttgtacttttagtagagacagcatttcgccatgttgggca-ggctggtctcgaacttctgggcccaagtgatccacctgcctcgacctccgaaagttctgggattataggtgtgaaccaccatgcctcgccTAAACTACATTCTTGAATTAGTTTTATGGCACAGAATATCTTTTTCTCC-CTCTCAATCCCCTCTCTCTCTCTAGCTCCCTTTCCTCCCCTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTATAAAACTTCTTTTGATTAATTATAAAGAA-----------tttttt--ttttttagat-ggagtcttgctctgtcgcccaggatggagtgcaatggcacaatctcagctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggactacaggagtgtgccaccacgcccggctaa-----ttttttttttttttttttttgtatttttagtagagatggggtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102632582 592 - 106955855 atcttgactctctgcaacctctgcctcttgggttcaagtgattctcctgccccagctccccccaagtacctggaattagagggttgtgcaaccatgcctggctgatttttgtacttttagtagagacagcgttttgccatgttggcca-ggctggtctcgcacttctgggcccaagtgatcccaaacaatcgacctcccaaagttctgggattacaggtgtgaaccaccatgccttgccTAAACTACATTCTTGAATTAGTTTTATGGCACAGAATATCTTTTTCTCCTCTCTCAATCCCCTCTCTCTCCCTAGCTCCCCTTCCTCCCCTACAGCTGCAAAGAAGAAATCTTCTTAATCCATTTCTAAAACTTCTTTTGATTAATTATAAAGAA-----------tttttg--ttttttagat-ggagtcttgctctgtcgcccaggatggagtgcaatggcacaatctcagctcacctcaacctccgcctcctgggttcaagtggttttcccacctcagcctccccagtagctgggactacaggtgcgtgccactacgctcgactac---------ttttttttttttttttgtatttttagtagagacggggtt i nomLeu3.chr10 I 340 C 0 s rheMac3.chr19 59920677 597 + 64156825 atctcaactcactgcaacctctgtctcctgggttcaagtgattctcctgccccagc-cccctcaagtacctgaaattacagggttgtgccaccatgcctggttaatttttgtatttttagtagagacaacatttcaccatgttggcca-ggctggtcgcaaacttctgagatcaagtgatccacactcctcagcctcccaaatttctgggattacaggtgtgaaccaccatgcctggccTAAACTACATTCTTGAATTAGTTTTACGGCATGGAATATCTTTTTCTCCTCTCTCAATCCTCTCTCTCTCTCTAGCGCCCTTTCTTCCCTTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTCTTAAACTTCTTTTGATTAATTATAAAGAA------ttttttttttt--ttttttagataagagtctccctctgtcacccaggctggagtgcaacggcagaatctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggactacagatgtgtgccactacacctggcttt---------ttttgtttgtttctttgtattttcagtagcgatggggtt i rheMac3.chr19 C 0 I 2 s macFas5.chr19 54940170 602 + 59248254 atctcaactcactgcaacctctgtctcctgggttcaagtgattctcctgccccagc-cccctcaagtacctgaaattacagggttgtgccaccatgcctggttaatttttgtatttttagtagagacaacatttcaccatgttggcca-ggctggtcgcaaacttctgagctcaagtgatccacccacctcagcctcccaaaattctgggattacaggtgtgaaccaccatgcctggccTAAACTACATTCTTGAATTAGTTTTACGGCATGGAATAtctttttctcctctctcaatcctctctctctctctagctccctttcctcCCCTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTCTTAAACTTCTTTTGATTAATTATAAAGAAttttttttttttttttt--ttttttagat-ggagtctccctctgtcacccaggctggagtgcaacggcaaaatctcagctcactgcaacctctgcctcctgggttcaagtgattctcctgcctcagcctcccgagtagctgggactacagatgtgtgccactacacctggcttt---------ttttgtttgtttctttgtattttcagtagcaatggggtt i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47056163 604 + 51301725 atctcaactcactgcaacctctgcctcctgggttcaagtgattctcctgccccagc-cccctcaagtacctggaattacagggttgtgccaccatgcctggttaatttttgtatttttagtagagacaacatttcaccatgttggcca-ggctggtcgcaaacttctgagctcaagtgatccgcccacctcagcctcccaaaattctgggattacaggtgtgaaccaccatgccgggcctaaACTACATTCTTGAATTAGTTTtatggcatggaatatctttttctcctctctcaatcctctctctctctctagctcccTTTCCTCCCCTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTCTTAAACTTCTTTTGATtaattataaagaattttttttttttttttttattttttagat-agagtctccctctgtcacccaggctggagggcaacggcaaaatctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggactacagatgtgtgccactacccctggcttt---------ttttgtttgtttctttgtattttcagtagcgatggggtt i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 46767362 593 + 50890351 atctcgactcactgcaacctctgcctcctgggttcaagtgattctcctgccccagc-cccctcaagtacctggaattacggggttgtgccaccatgcctggttaatttttgtatttttagtagagacaacatttcaccatgttggcca-ggctggtcgcaaacttctgagctcaagtgatccgcccacctcagcctcccaaaattctgggattacaggtgtgaaccaccatgcctggcTTAAACTACATTCTTGAATTAGTTTTACGGCACGGAATAtctttttctcctctctcaatcctctgtctctctctagctccctttcctcCCCTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTCTTAAACTTCTTTTGATTAATTATAAAGAA---------tttttttt--ttttttagat-ggagtctccctctgtcacccaggctggagtgcaacggcaaaatctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggactacagatgtgtgccactacccctggcttt---------ttttgtttgtttctttgtattttcagtagcgatggggtt i chlSab2.chr6 C 0 I 2 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=88561.000000 s hg38.chr19_GL949747v2_alt 62785 47 + 729520 tcaccatgttagccaggatggtctcgatctcctgacctcatgatccg s panTro4.chr19 58996559 47 + 63644993 tcaccatgttagccaggatggtctcgatctcctgacctcatgatccg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872952 47 + 60714840 tcaccatgttagccaggatggtctcgatctcctgacttcgtgatccg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633174 47 - 106955855 tcaccatgttagccaggatggtctcgatctcctgaccttgtgatccg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59921276 47 + 64156825 tcaccatgttagccaggatggtcttgatctcctgacctcatgatctg i rheMac3.chr19 I 2 C 0 s macFas5.chr19 54940774 47 + 59248254 tcaccatgttagccaggatggtcttgatctcctgacctcatgatctg i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47056769 47 + 51301725 tcaccatgttagccaggatggtcttgatctcctgacctcatgatctg i papAnu2.chr19 I 2 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I e chlSab2.chr6 46767955 2 + 50890351 I a score=21831.000000 s hg38.chr19_GL949747v2_alt 62832 39 + 729520 cccacctcagccttccaaagtgctgggactacaggcgtg s panTro4.chr19 58996606 39 + 63644993 cccacctcagccttccaaagtgctgggactacaggcgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872999 39 + 60714840 cccacctcagcctcccaaagtgctgggattacaggcgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633221 39 - 106955855 cccacctcagccttccaaagtgctgggactacaggcgtg i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I e chlSab2.chr6 46767955 2 + 50890351 I e papAnu2.chr19 47056816 0 + 51301725 C e macFas5.chr19 54940821 0 + 59248254 C e rheMac3.chr19 59921323 0 + 64156825 C a score=10660.000000 s hg38.chr19_GL949747v2_alt 62871 60 + 729520 tgccactacacccggcTACTTTTGTGTGTGTGTGTGtgtgtgtttagtagagacggagtt s panTro4.chr19 58996645 59 + 63644993 tgccactacacccggcTAC-TTTGTGTGTGTGTGTGtgtgtttttagtagagacggagtt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102633260 57 - 106955855 tgccactacgccgggcTACCTTT---TTTTTttttttgtatttttagtagagacggggtt i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e ponAbe2.chr19 55873038 0 + 60714840 C e calJac3.chr22 45332635 245 + 49145316 I e chlSab2.chr6 46767955 2 + 50890351 I e papAnu2.chr19 47056816 0 + 51301725 C e macFas5.chr19 54940821 0 + 59248254 C e rheMac3.chr19 59921323 0 + 64156825 C a score=22801.000000 s hg38.chr19_GL949747v2_alt 62931 47 + 729520 tcaccatgttagccaagatggtctcgatctccggaccttgtgatcca s panTro4.chr19 58996704 47 + 63644993 tcaccgtgttagccaagatggtctcgatctcctgacctcatgatccg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102633317 47 - 106955855 tcaccatgttagccaaggtggtctcgatctcctgacctcgtgatccg i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 46767957 47 + 50890351 tcaccatgttagccagaatggtcttgatctcctgacctcatgatctg i chlSab2.chr6 I 2 C 0 e canFam3.chr1 19564854 888 - 122678785 I e ponAbe2.chr19 55873038 0 + 60714840 C e calJac3.chr22 45332635 245 + 49145316 I e papAnu2.chr19 47056816 0 + 51301725 C e macFas5.chr19 54940821 0 + 59248254 C e rheMac3.chr19 59921323 0 + 64156825 C a score=69566.000000 s hg38.chr19_GL949747v2_alt 62978 39 + 729520 cccgcctcagcctcccaaagtgctgggattacaggtgta s panTro4.chr19 58996751 39 + 63644993 cccacctcagcctcccaaagtgccgggattacaggtgta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102633364 39 - 106955855 cccgcctcagcctcccaaagtgatgggattacaggcgtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59921323 39 + 64156825 cctgcctcagcctcccaaagtgctggtattacaggcgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54940821 39 + 59248254 cctgcctcagcctcccaaagtgctggtattacaggcgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47056816 39 + 51301725 cctgcctcagcctcccaaagtgctggtattacaggcgtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46768004 39 + 50890351 cctgcctcagcctcccaaagtgctggtattacaggcgtg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e ponAbe2.chr19 55873038 0 + 60714840 C e calJac3.chr22 45332635 245 + 49145316 I a score=776036.000000 s hg38.chr19_GL949747v2_alt 63017 321 + 729520 agccactgtgcccggccAATTATAAATATTTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGGCCTATAAAGTTCAATTTTACTGGTAGAAAGCAAGAAATGGATGAATAGGATGTTCGCTGACAACCATGCAATtgaaacctcctttgcaaaaattacgagagtgagcaaacgatggcagtgaaggagatcggatctggccagcccctaccttgcctttggccctcaaactgcttgtagttattcctgggtttaggctaatctgacttgtctctttgggagaca-tttattttattttct s panTro4.chr19 58996790 321 + 63644993 agccactgtgcccggccAATTATAAATAATTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGGCCTATAAGGTTCAATTTTACTGGCAGAAAGCAAGAAATGGATGAATAGGATGTTTGCTGACAACCATGCCATtgaaacctcctttgcaaaaattacgagagtgagcaaacgatggcagcaaaggagatcggatctggccagcccctaccttgcctttggccctcaaactgcctgtagttattcctgggtttaggctaatctgacttgtctctttgggagaca-tttattttattttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55873038 321 + 60714840 agacactgtgcccggccAATTATAAATAATTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGGCCTATAAAGTTCAATTTTACCGGTAGAAAGCAAGAAATGGATGAATAGGATGTTCTCTGACAACCATGCAATtgaaacctcctttgcaaaaattacgagagtgagcaaacaatggcagtgaaggagatcggatctggccagcccctaccttgcctttggccctcaaacttcctgtagttattcctgggtttaggctaatttgacttgtctctttgggagaca-tttgttttattttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633403 319 - 106955855 agccactgcgcccggccAATTATAAATAATTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAACAGGCCTATAAAGTTCAATTTTACTGGTAGAAAGCAAGAAATAGATGAATAGGATGTTCGCTGACAACCATACAATtgaaacctcctttgcaaaaattac--gagtgagcaaacaatggccgtgaaggagattggatctggccagcccctacgttgcctttggccctcaaagtgcctgtggttattcctgggtttaggctaatctgagttgtctctttgggagaca-tttattttattttct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59921362 322 + 64156825 agccactgcacctggccAATTATAAATAATTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGGCCTATAAAGTTCAATTTTACTGGTAGAAAGCAAGAAATGGATGAATAGGATGTTAGCTGACAACCATGCAATtgaaacctcctttgcaaaaactatgagagtgagaaaacaatggcagtgaaggagatcggatctggccagcccctaccttgcctttgaccctcaagctgcctgtagttattcctgggtttaggctaatctgacttGTCTCTTTGGGAGAtattttattttattttat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54940860 322 + 59248254 agccaccgcacctggccAATTATAAATAATTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGGCCTATAAAGTTCAATTTTACTGGTAGAAAGCAAGAAATGGATGAATAGGATGTTAGCTGACAACCATGCAATtgaaacctcctttgcaaaaactatgagagtgagaaaacaatggcagtgaaggagatcggatctggccagcccctaccttgcctttgaccctcaagctgcctgtagttattcctgggtttaggctaatctgacttgtctctttgggagatattttattttattttat i macFas5.chr19 C 0 I 130 s papAnu2.chr19 47056855 322 + 51301725 agccaccgcacctggctaattataaataatttttaaggctaAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGGCctataaaattcaattttactGGTAGAAAGCAAGAAATGGACGAATAGGATGTTAGCTGACAACCATGCAATTGCAACCTCCTTTGCAAAAACTATGAGAGTAAGAAAACAATGGCAGTGAAGGAGATCGGATCTGGCCAGCCCCTACCTTGCCTTTGACCCTCAAGCTGCCTGTAGTTATTCCTGGGTTTAGGCTAATCTGACTTGTCTCTTtgggagatattttattttattttat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46768043 322 + 50890351 agccaccgcacctggccAATTATAAATAATTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGACCTATAAAGTTCAATTTTACTGATAGAAAGCAAGAAATGGATGAATAGGATGTTAGCTGACAACCATGCAATtgaaacctcctttgtaaaaactatgagagtgagaaaacaatggcagtgaaggagatcggatctagccagcccctaccttgcctttgaccctcaagctgcctgtagttattcctgggtttaggctaatctgacttgtctctttgggagatattttattttattttat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=6209.000000 s hg38.chr19_GL949747v2_alt 63338 3 + 729520 ttt s panTro4.chr19 58997111 3 + 63644993 ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55873359 3 + 60714840 tgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633722 3 - 106955855 ttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59921684 3 + 64156825 ttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54941312 3 + 59248254 ttt i macFas5.chr19 I 130 C 0 s papAnu2.chr19 47057177 3 + 51301725 ttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46768365 3 + 50890351 ttt i chlSab2.chr6 C 0 I 249 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=5096.000000 s hg38.chr19_GL949747v2_alt 63341 2 + 729520 at s panTro4.chr19 58997114 2 + 63644993 at i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55873362 2 + 60714840 at i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633725 2 - 106955855 at i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59921687 2 + 64156825 at i rheMac3.chr19 C 0 I 305 s macFas5.chr19 54941315 2 + 59248254 at i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47057180 2 + 51301725 at i papAnu2.chr19 C 0 I 246 s chlSab2.chr6 46768617 2 + 50890351 at i chlSab2.chr6 I 249 I 1 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=-310.000000 s hg38.chr19_GL949747v2_alt 63343 1 + 729520 a s panTro4.chr19 58997116 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55873364 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633727 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I e chlSab2.chr6 46768619 1 + 50890351 I e papAnu2.chr19 47057182 246 + 51301725 I e macFas5.chr19 54941317 1 + 59248254 I e rheMac3.chr19 59921689 305 + 64156825 I a score=343570.000000 s hg38.chr19_GL949747v2_alt 63344 192 + 729520 tttccttgagacggagtctcgctctgtagcccgggctggagtgcagtggtgagatctcggttcaccgcaacctctgcatcctagttcaagggattctcctgcctcagcctccagagtagctggaattacaggtgcctgccaccatgcccgattaatttttgtatttttagtagagacgaggtttcaccatgt s panTro4.chr19 58997117 192 + 63644993 tttccttgagacggagtctcgctctgtagcccgggctggagtgcagtggtgagatctcggttcaccgcaacctctgcatcctagttcaagcgattctcctgcctcagcctccagagtagctggaattacaggtgcctgccaccaagcccgactaatttttgtatttttagtagagacgaggtttcaccatgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55873365 192 + 60714840 tttccttgagacggagtctcactctgtagcccaggctggagtgcagtggtgcgatctcggttcaccgcaacctctgcctcctagttcaagcgattctcctgcctcagcctccagagtaactggaattacaggtgcctgccaccaagcccaactaatttttgtatttttagtagagatgaggtttcaccatgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633728 192 - 106955855 tttccttgagacggagtctcactctgtagcccaggctggagtgcagtggtgcgatctcggttcaccgcaacctctgcttcctagttcaagtgattctcctgcctcagcctccagagtagctggaattacaggtgcctgccaccaagcccgactaatttttgtatttttagtagagacaaggtttcaccatgt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54941318 192 + 59248254 tttccttgagatggagcctcactctgtagcccaggctggagtgcagtggtgcaatctcagttcaccgcaacctctgcctcctagttcaagcgattctcctgcctcagcctccagagtagctggaactacaggtgcctgccaccatgcccgactaatttttgtatttttagtagagacgaggtttcaccatgt i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47057428 192 + 51301725 tttccttgagatggagcctcactctgtagcccaggctggagtgcagtggtgcaatctcggttcaccgcaacctctgcctcctagttcaagcgattctcctgcctcagcctccagagtagctggaactacaggtgcctgccaccatgcccgactaatttttgtatttttagtagagacgaggtttcaccatgt i papAnu2.chr19 I 246 C 0 s chlSab2.chr6 46768620 170 + 50890351 tttccttgagatggagcctcactctgtagcccagactggagtgcagtggtgcaatctcggttcaccgcaacctctgcctcctagttcaagcgattctcctgcctcagcc----------------------gtgcctgccaccatgcccgactaatttttgtatttttagtagagacaaggtttcaccatgt i chlSab2.chr6 I 1 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I e rheMac3.chr19 59921689 305 + 64156825 I a score=287599.000000 s hg38.chr19_GL949747v2_alt 63536 122 + 729520 tggccaggctggtctgaaactcctgacctcaagagatccgcccgccttggcctcccaaagtgctgggattagaggaaagaaggaaagg-aaggaaaagaaaggaaaagagaggagaggagagg----- s panTro4.chr19 58997309 122 + 63644993 tggccaggctggtctgaaactcctgacctcaagtgatccacccgccttggcctcccaaagtgctgggattagaggaaagaaggaaagg-aaggaaaagagaggaaaagagaggagaggagagg----- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55873557 123 + 60714840 tggccaggctggtctgaaactcctaatctcaagtgatccgcccgccttggcctcccaaagtgctgggattagaggAAAGaaggaaaggaaaagaaaggaaaggaaaggaaaggaaaggaaagg----- i ponAbe2.chr19 C 0 I 341 s nomLeu3.chr10 102633920 122 - 106955855 tggccaggctggtctgaaactcctgacctcaagtgatccgctcaccttggcctcccaaagtgctgggattagaggaaagaaggaaagg-aaggaaaagtaaggaaaagagaggagaggagagg----- i nomLeu3.chr10 C 0 I 5 s rheMac3.chr19 59921994 127 + 64156825 tggccagactggtctgaaactcctgacctcaagtgatctgcccaccttggcctcccaaagtgctgggattagaggAAAGaaggaaagg-aaggtaagaaaaggaaaagaaaggaaaggaaagggaggg i rheMac3.chr19 I 305 C 0 s macFas5.chr19 54941510 127 + 59248254 tggccagactggtctgaaactcctgacctcaagtgatctgcccaccttggcctcccaaagtgctgggattacaggaaagaaggaaagg-aaggtaagaaaaggaaaagaaaggaaaggaaagggaggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47057620 127 + 51301725 tggccagactggtctgaaactcctgacctcaagtgatctgcccaccttggcctcccaaagtgctgggattagaggaaagaaggaaagg-aagggaagaaaaggaaaagaaaggaaaggaaagggaggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46768790 127 + 50890351 tggccagactggtctgaaactcctgacctcaagtgatctgcccaccttggcctcccaaagtgctgggattagaggAAAgaaggaaagg-aagggaagaaaaggaaaagaaaggaaaggaaagggaggg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=127964.000000 s hg38.chr19_GL949747v2_alt 63658 172 + 729520 ggaggggagggg------------aagggagagaaaggaaagga--------------------------aagggagaga-----aagggaag--------------------------------------------------------------------------------------------------agagaaagaaagaagaaaagagagaaagaaagaaagaaagaaagaaag-------------------------------------------------------------------------------------a---aaaat---------------------------------------aaagaaagaagaa---aaaagaaaa-gagaaaaggaagg-----------------------agggagggagggaggcaaggaaggaaggaagca s panTro4.chr19 58997431 180 + 63644993 ggaggggagggg------------aagGgagagaaaggaaaggg--------------------------aagagagaaagaaagaagaaaag--------------------------------------------------------------------------------------------------agagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag-------------------------------------------------------------------------------------aaagaaagt---------------------------------------aaagaaagaagaa---aaaagaaaa-gagaaaaggaagg-----------------------agggagggactgaggcaaggaaggaaggaagca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102634047 246 - 106955855 ggaggggagggg------------aagggagagaaaggaaagggtgagaaagggaagagagaaagaagaaaagagagaaagaaagaaggaaagggtgagaaagggaagagataaagagagaaagaagaa-------------------------------------------------------------aagagaaagaaagaaggaaagaaagaaagaaggaaagaaagaaagaaag-------------------------------------------------------------------------------------agagaaaaa---------------------------------------gaggaaggaaggaaggaagagaaaa-gaaaaaagaaagg-----------------------agggagggagggagggaaggaaggaaagaagga i nomLeu3.chr10 I 5 I 8 s rheMac3.chr19 59922121 207 + 64156825 ggaggggagggg------------aagggagagaaaggaaagga--------------------------aagggagaga-----aagggaaTAGT----------------------------------------------------------------------------------------------GAGAGAAAGAAGAAAAGAGAG------------------------AGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaggaa----------------------------------------------------------------------------ggaag-----------------------gaaaggaaaggaaaggaaaggaggaaggaagga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54941637 188 + 59248254 ggaggggagggg------------aagggagagaaaggaaagga--------------------------aagggagaga-----aagggaatagt----------------------------------------------------------------------------------------------gagagaaagaagaaaagagagaaagaaagagaaagaaagaaagaaagag-------------------------------------------------------------------------------------aaagaaag------agaaagagag------------------------aaagagagagaga---gaaagagag-gaaggaaggaaag-----------------------gaaaggaaaggaaaggaaaggaggaaggaagga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47057747 320 + 51301725 ggaggggagggggaggggaggggaaggggagagaaaggaaagga--------------------------aagggagaga-----aagggaatagtgagagaaagaaga---aaagagagaaagaatgagagaaagaagaaaaagagagaaagaaagagagaaagaaggaaagaaagaaagaaagagagagagagagagaaagaaagaaagaaagaaagagaaagaaaaagaaagaaag-------------------------------------------------------------------------------------aaagaaagaaagaaagaaagaaag------------------------aaagaaagaaaaa---gaaagaaaa-gaaagaaagaaagagaaagagaaagagaggaaggaaggaaggaaaggaaaggaaaggaggaaggaagga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46768917 272 + 50890351 ggaggggagggg------------aagggagagaaaggaaagga--------------------------aagggagaga-----aagggaaTAGTGAGagaaagaaga---aaagagagaaagaaaaa-------------------------------------------------------------gaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag-------------------------------------------------------------------------------------aaagaaagaaagaaagaaagaaagaaaggaagaaagaaagaaaaaagaaaagagagagaga---gaaagaaagagaaagaaagaaagagagagagaaaaagaggaaggaaggaaggaaaggaaaggaaaggaggaaggaagga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e ponAbe2.chr19 55873680 341 + 60714840 I e calJac3.chr22 45332635 245 + 49145316 I a score=75688.000000 s hg38.chr19_GL949747v2_alt 63830 35 + 729520 agaaagagagaaagagagaaaAGAGGCTCCTTATA s panTro4.chr19 58997611 35 + 63644993 agaaagagagaaagagagaaaAGAGGCTCCTTATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874021 35 + 60714840 agaaagaaagaaagggaGAAAAGAGACTCCTTATA i ponAbe2.chr19 I 341 C 0 s nomLeu3.chr10 102634301 35 - 106955855 agaaagaaagaaagggagaaaAcaggctacttata i nomLeu3.chr10 I 8 C 0 s rheMac3.chr19 59922328 35 + 64156825 aggagggaaggaagggagaaaagaGGTTCCTTATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54941825 35 + 59248254 aggagggaaggaagggagaaaagaGGTTCCTTATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47058067 35 + 51301725 aggagggaaggaagggagaaaagaggttccttata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46769189 35 + 50890351 aggagggaaggaagggagaaAAGAGGTTCCTTATA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=402849.000000 s hg38.chr19_GL949747v2_alt 63865 127 + 729520 AATAACAAAAGACACCCTTCTCACCAAGGGTTTTTGGAAATTCCAGAGTGATGGGGTGAGAAGGGTGTCTTTggaaccaaagctgaagaccaagtacatatttcttactatatcacggtatcacggg s panTro4.chr19 58997646 127 + 63644993 AATAACAAAAGACACCCTTCTCACCAAGGGTTTTTGGAAATTCCAGAGTGATGGGGTGAGAAGGGTGTCTTTggaaccaaagctgaagaccaagcacatatttcttactatatcacgatatcacggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874056 127 + 60714840 AAAAACAAAAGACACTCTTCTCACCAAGGGTTTTTGGAAATTCCAGAGTGATGGGGTGAGAAGGGTGTCTTTggaaccaaagctgaagaccaaatacgtatttcttactatatcacGATATCACggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102634336 127 - 106955855 aataacaaaagacacccttctcaccaaggatttttggaaattccagagtgacggggtgagaagggtgtctttggaaccaaagctgaagaccaaatacatatttcttactatatcacgatatcacggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59922363 127 + 64156825 AATAacaaaagacacccttctcaccaagggtttttggaaattccagagtgatggggtgagaagggtgtctttggaaccagagctgaagaccaaatacatatttcttactatatcacgatatcacagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54941860 127 + 59248254 AATAACAAAAGACACCCTTCTCACCAAGGGTTTTTGGAAATTCCAGAGTGATGGGGTGAGAAGGGTGTCTTTggaaccagagctgaagaccaaatacatatttcttactatatcacgatatcacagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47058102 127 + 51301725 aataacaaaagacacCCTTCTCACCAAGGGTTTTTGGAAATTCCAGAGTGATGGGGTGAGAAGGGTGTCTTTGGAACCAGAGCTGaagaccaaatacatatttcttactATATCACGATATCACAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46769224 127 + 50890351 AATAACAAAAGACACCCTTCTCACCAAGGGTTTTTGGAAATTCCAGAGTGATGGGGTGAGAAGGGTGTCTTTggaaccagagctgaagatcaaatacatatttcttactatatcacgatatcacagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45332880 126 + 49145316 aataACAAAAGACACCCTTCTCA-CGAGGATTTTTGGAATTTCCAGAGTGACGGGGTGAGAAGGGGGTCTTTggaaccagagctgaagaccaaacacgtatttctcactatatcacaatatcgcagg i calJac3.chr22 I 245 C 0 e canFam3.chr1 19564854 888 - 122678785 I a score=763349.000000 s hg38.chr19_GL949747v2_alt 63992 238 + 729520 aggtaaaacggaggtggccttgaagcagctcctccccagcccccaatcctcttgtgtgcccggaggatcagaagaggtcccgccgagactcagcttagctgtggttcaagcctctgattgcgtgga----taag-----------------taccaggtttccagagt-----------------------gccagggcggggctg-cc----cctTGCGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATGGGTCCTG-------------TT s panTro4.chr19 58997773 238 + 63644993 aggtaaaacggaggtggccttgaagcagctcctccccagcccccaatcctcttgtgtgcccggaggatcagaagaggtcccgccgagactcagcttagctgtggttcaagcctctgattgcgtgga----taag-----------------taccaggtttccagagt-----------------------gccagggcggggctg-cc----cctTGCGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATGGGTCCTG-------------TT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874183 255 + 60714840 aggtaaaacggaggtggccttgaagcagctcctccccagcccccaatcctcttgtgtgcccggaggatcagaagaggtcccgccgagactcagcttagctgtggttcaagcctctgattgggtggA----TAAAGCACGCAATCCTTTCCTTTCCAGGTTTCCAGAGT-----------------------GCCAGGGCAGGGCTG-CC----CCTTGGGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATGGGTCCTG-------------TT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102634463 238 - 106955855 aggtaaaacgg-ggtggccttgaagcagctcctccccagcccccaatcctcttgtgtgcctggaggatcagaagaggtcctgccgagactcagcttagctgtggttcaatcctctgattgcacaga----taag-----------------taccaggtttccagagt-----------------------gccagggcagggctgccc----ccttgcGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACATGATCTTCAGATGGGTCCTG-------------TT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59922490 252 + 64156825 aggtaaaagggaggtgcccttgaagcagctcctccccagcccccaatcctcttgtgtgcccggaggatcagaagaggtcccgccaagactcagcttagctgtggttcaagcctctgattgcgtgga----taaa-----------------taccaggtttccagagt-----------------------gccagggcagggctgccc----ccttgcGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATAGGTCCTGTTTCAACTGAACATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54941987 252 + 59248254 aggtaaaagggaggtgcccttgaagcagctcctccccagcccccaatcctcttgtgtgcccggaggatcagaagaggtcccgccaagactcagcttagctgtggttcaagcctctgattgcgtgga----taaa-----------------taccaggtttccagagt-----------------------gccagggcagggctgccc----ccttgcGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATAGGTCCTGTTTCAACTGAACATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47058229 252 + 51301725 AGGCAAAAGGGAGGTGCCCTTGAAGcagctcctccccagcccccaatCCTCTTGTGTGCCCGGATGATCAGAAGAGGTCCCGCCAAGACTCAGCTTAGCTGTGGTTCAAGCCTCTGATTGCGTGGA----TAAA-----------------TACCAGGTTTCCAGAGT-----------------------GCCAGGGCAGAGCTGCCC----CCTTGAGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATAGGTCCTGTTTCAACTGAACATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46769351 252 + 50890351 aggtaaaagggaggtgcccttgaagcagctcctccccagcccccaatcctcttgtgtgcccggaggatcagaagaggtcccgccaagactcagtttagctgtggttcaagcctctgattgcgtgga----taaa-----------------taccaggtttccagagt-----------------------gccagggcagggctgccc----ccttgcGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATAGGTCCTGTTTCAACTGAACATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45333006 249 + 49145316 aggtgaaagggagatggcctcgaagcagctcctccacaccccctaatcct---------------gatcggaaga-gtcctgccaagactcagcctagctgtggttcaagcctctgattgcggggatggttaag-----------------taccagatttccagagTCTTTTGAATATTCTCAGTTTATGACCAGCGCAGCGCTGCCC----CCTTGTGGTGGCACTAACTTTGCACAGCTATTT-AAAATAAGCAGTGGACACACCATCTTCAGA-------------GACTGAACAT- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19565742 244 - 122678785 aggtgagtgggagatgggctcacagcagctcctcacaaacctcccatccttgcgtgttccagtgggatcataaggcattgtgcccggactcagattagctgcagttcaagcctctgactgtgtagc----catg-----------------tgaagggtttccaggat-----------------------gccatagcagagccCCCCACCACCTTCCCGTGGCATGAACTTTCCATAGTTCTTTAAAAATAAGCAatgggtacaagatctccagaaggatgttg-------------tt i canFam3.chr1 I 888 I 1177 a score=136054.000000 s hg38.chr19_GL949747v2_alt 64230 43 + 729520 TTACTTCCATATTTTCTCCTAGAGAGAAGAAAAATCATTAAAC s panTro4.chr19 58998011 43 + 63644993 TTACTTCCATATTTTCCCCTAGAGAGAAGAAAAATCATTAAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874438 43 + 60714840 TTACTTCCATATTTTCCCCTAGAGAGAAGAAAAATCATTAAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102634701 43 - 106955855 TTACTTCCATATTTTCCCCTAGAGAGAAGAAAAATCATTAAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59922742 43 + 64156825 TTACTTCCATATTTTCCCCTGGAGAGAAGAAAAATCATTAAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54942239 43 + 59248254 TTACTTCCATATTTTCCCCTGGAGAGAAGAAAAATCATTAAAC i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47058481 43 + 51301725 TTACTTCCATATTTTCCCctggagagaagaaaaatcattaaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46769603 43 + 50890351 TTACTTCCATATTTTCCCCTGGAGAGAAGAAAAATCATTAAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45333255 40 + 49145316 ---CCTCCATATTTTCCCCAAGAGAGAAGAAAAATCATTAAAC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19565986 1177 - 122678785 I a score=574939.000000 s hg38.chr19_GL949747v2_alt 64273 344 + 729520 ttttttttgtttgttttttgtttttttgttttattcgttgttttt-tttttttttttttttttttgagacggagtctcgctc-tgtggcccaggctggagtgcaatggcgtg-tatcagctcactgcaacctctgcctccagggttcaagtgattctcctgcctcagcctcccgagtagctgggattacag-------------------------ctttgtatttttagtagagtcggggtttcactatattggccagggtggtctccaactcctgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattacaggcgtgaaccaccgcacctggcctactgtat-tttttttttttttttt- s panTro4.chr19 58998054 337 + 63644993 TTTTTTTTGT---TTTTTTGTTTTATTGGT------Gttatttttatttatttatttatttttttgagacggagtctcactc-tgtggcccaggctggagtgcaatggcgtg-tatcagctcactgcaacctccacctccagggttcaagtgattctcctgcctcagcctcccgagtagctgggattacag-------------------------ctttgtatttttagtagagtcggggtttcactatattggccagggtggtctccaactcctgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattacaggcgtgaaccaccgcacctggccTACTGtatatatatatatatttttt- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874481 326 + 60714840 TTTTTTCTGTTTGttttttgtttttttgt-----------------tttattggtttttttttttgagacggagtctcgctc-tgtcacccaggctggaatgcaatggcatg-tatcggctcactgcaacctctgcctccagggttcaagtgattctcctgcctcagcctcccgagtagctgggattactg-------------------------ctttgtatttttagtagagtcggggtttcactatattggccaggctggtctccaactcctgacctcaggtgatctgcctgccttggcctccgaaactgctgggattacaagtatgaaccaccgcacctggccTACTGt---tttttttttttttttt- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102634744 342 - 106955855 tttttttcgtttgttttttgtttttttgttttattgttttttttgtttttgtttttgttttttttgagacagagtctcgctc-tgtcgcccaggctggagggcaatggcgtgatatcggctcactgcaacctctgcctccagggttcaagtgattctcctgcctcagcctcctgagtagctgggattacag-------------------------ctttctatttttagtagagtcgggatttcactatattggcctggctggtctccaactcctgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattacaggcgtgaaccaccgcacctggccTACTGtat-----tttttgtttttt- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59922785 319 + 64156825 ----------------------------------------------Gtttctttttgggtttttttagacagagtctcactc-tgtcgcccaggctggagtgcaatggcgcaatatcagctcactgcaacctctgcctcctgggttcaagtgattctccggccttagcctcccgagtagctgggattacaggcgcccactaccatgcccagcacatttttgcatttttagtagagtcagggattcactatattggccaggctggtctccaactcctgacctcaggtgatctgcctgccttagcctcccaaagtgctgggattataggcatgagccaccgggcctggccTA-------TTTTTGTTTTTGTTTT- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47058524 319 + 51301725 ----------------------------------------------gtttctttttgggtttttttagacagagtctcactc-tgtcgcccagcctggagtgcaatggcgcaatatcagctcactgcaacctctgcctcctgggttcaagtgattctcctgccttagcctcccgagtagctgggattacaggcgcccactaccatgcccagcaaatttttgcatttttagtagagtcagggtttcactatattggccaggctggtctccaactcctgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattataggcatgagccaccgggcctggccta-------tttttgtttttgtttt- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46769646 319 + 50890351 ----------------------------------------------Gtttctttttgggttttttaagacagagtctcactc-tgtcgcccaggctggagagcaatggtgcaatatcagctcactgcaacctctgcctcctgggttcaagtgattctcctgccttagcctcccgagtagctgggattacaggcgcccactactatgcccagcaaatttttgtatttttagtagagtcggggtttcattatattggccaggctggtctccaactcctgagctcaggtgatctgcctgccttggcctcccaaattgctgggattataggcatgagccaccgggcctggccTA-------TTTTTGTTTTTGTTTT- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45333295 316 + 49145316 ------------------------------------------------------tttttttttttgagatggaggtttgctcttgtaacccaggctggagcccagagctgcgatctcggctcactgcaacgtccgcctcccaggttcaagtgattctcctgcctcagtctcccgagtagctgggattacaggcatgcaccaccacaccaagcgaattttttcattcttagtagagatgggatttcactatatcggccaggctggtctcaaactcctgacctt--gtgatccacccaccttggcatcccaaagtgctgagatcacaggcgtgagccacagtgcccggcATCACACA--TTTTTATTCGTTTTTCT i calJac3.chr22 C 0 I 1953 e canFam3.chr1 19565986 1177 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=251456.000000 s hg38.chr19_GL949747v2_alt 64617 135 + 729520 GAATAGAGAAGGGAgtctcaaactcttggcctcaagccatcctcctgcctcagtttcccaaaatgctgggattat---gagtgagccactgcaccTATCCCACCCCCTCCCaccctcatttttagaagggcacaggct s panTro4.chr19 58998391 135 + 63644993 aaataGAGAAGGGAgtctcaaactcttggcctcaagccatcctcctgcctcagcttcccaaaatgctgggattat---gagtgagccactgcaccTATCCCACCCCCTCCCaccctcatttttagaagggcacaggct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874807 137 + 60714840 aaataaaGAAGGGAgtctcaaactcctggcctcaagccatcctcctgcctcagcctcccaaaatgctgggattat-aagagtgagccactgcaccTATCCCACCCCCTCCCaccctcatttttagaagggcacaggct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102635086 137 - 106955855 taatagagaagggagtctcagactcctggcctcaagccatcctcctgcctcagcctcccaaaatgctgggattat-aagagcaagccactgcaccTATCCCACCCCCTCCCACCCTCATTTTTAGAAGGGCACAGGCT i nomLeu3.chr10 C 0 M 1542 s rheMac3.chr19 59923104 138 + 64156825 TAATAGAGAAGGGAgtctcaaactcctggcctcaagctatcctcctccctcagcctcccaaagtgctgggattgttaagagtgagccactgcaccTATCCCACCCCCTCCCACCCTCATTTTTAGAAGGGCACAGGCT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47058843 138 + 51301725 taatagagaagggagtctcaaactcctggcctcaagctatcctcctgcctcagcctcccaaagtgctgggattgttaagagtgagccactgcacctatcccaccccctcccaccctcattTTTAGAAGGGCACAGGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46769965 138 + 50890351 TAATAGAGAAGGGAgtctcaaactcctggcctcaagctatcctcctgcctcagcctcccaaagtgctgggattgttaagagtgagccactgcaccTATCCCACCCCCTCCCaccctcatttttagaagggcacaggct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=20340.000000 s hg38.chr19_GL949747v2_alt 64752 17 + 729520 agagaccatatttccat s panTro4.chr19 58998526 17 + 63644993 agagaccatatttccat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874944 17 + 60714840 agagaccatatttcctt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59923242 17 + 64156825 AGAGACCATATTTCCAT i rheMac3.chr19 C 0 I 2242 s papAnu2.chr19 47058981 16 + 51301725 AGAGACCATATTTCCA- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46770103 17 + 50890351 agagaccatatttccat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I a score=32868.000000 s hg38.chr19_GL949747v2_alt 64769 48 + 729520 cagtcacttttgcggctagacctgtccatgagactaagttctagccaa s panTro4.chr19 58998543 48 + 63644993 cagtcacttttgcggctagacctggccatgagactaagttctagccaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874961 48 + 60714840 cagccacttttacggctagacctggccatgagactaagttctagccaa i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47058997 39 + 51301725 ---------TAGTGGCTAGGCCTGGCCATGAGACTAAGTTccaccaca i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46770120 48 + 50890351 cagtcacttttgtggctagacctggccatgagactaagttcCACCACA i chlSab2.chr6 C 0 I 51 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=546.000000 s hg38.chr19_GL949747v2_alt 64817 1 + 729520 t s panTro4.chr19 58998591 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875009 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47059037 1 + 51301725 t i papAnu2.chr19 I 1 I 25 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770168 51 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=9221.000000 s hg38.chr19_GL949747v2_alt 64818 36 + 729520 gggatgcgataggaagatacatgctcaaattctagg s panTro4.chr19 58998592 36 + 63644993 gggatgcggtaggaagatatatgctcaaattctagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875010 36 + 60714840 gggatgcaataagaagatatatgctcaaattctagg i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770168 51 + 50890351 I e papAnu2.chr19 47059038 25 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=5469.000000 s hg38.chr19_GL949747v2_alt 64854 21 + 729520 tcctgctcttaaaAAATAATT- s panTro4.chr19 58998628 21 + 63644993 tcctgctcttaaaaaATAATT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875046 21 + 60714840 tcctgctctaaaaaAATAATT- i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47059063 22 + 51301725 TCCTAATCTTTATATAAGATCT i papAnu2.chr19 I 25 I 2 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770168 51 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=201974.000000 s hg38.chr19_GL949747v2_alt 64875 267 + 729520 GTGTGggccgggcgcagtggctcacgcctgtaatcccagtactttgggaggctgaggcaggcggatcac--gaggtcaggaaatcgagaccatcctggataacacggtgaaaccccgtctctactaaaaatacaaaaaaatttagccgggtgtggtggtggacgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggc s panTro4.chr19 58998649 266 + 63644993 GTGTGggccgggcgcagtggctcacgcctgtaatcccagtactttgggaggctgaggcaggcggatcac--gaggtcaggaaatcgagaccatcctggataacacggtgaaaccccgtctcgactaaaaatacaaaaaaa-ttagccaggcgtggtggtggacgcctatagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccaggaggcggagcttgcattgagtcgagatcacgccactgcactccagcctgggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875067 267 + 60714840 GTGTGggccaggcgcggtggttcacacctgtaatcccagtaccttggaaggctgaggggggcggatcac--gaggtcaggagatcgagaccatcctggataacacggtgaaaccccgtctctactgaaaatacaaaaaaaattagccgggcgtggtggtggacgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccaggaggcagagcttgcagtgagtcgagatcacgccactgcactccagcctgggt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47059087 265 + 51301725 gttagggccgggcacagtggcttacgcctgtaatcctagcactttgggaggccgaggcaggtggatcacctgaggtcgggagttcgagaccagcctgatcaacatggagaaaccccgtctctactacaaatacgaaa----ttagctgggcatggtggcgcatgcctgtaatcccagctactcgggaggctgaggcagaagaatcgcttgaacccgggaggcagaggttgtggtgagccgagatcgtgccatggcactccagcctgggc i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 46770219 265 + 50890351 GTGAGggccgggcgcagtggctcatgcctgtaatcctagcactttgggaggccgaggcgggtggatcacctgaggtcgggagttcaagaccagcctgatcaacatggagaaaccctgtctgtactacaaatacaaaa----ttagctgggcatggtggcgcatgcctgtaatcccagctactcgggaggctgaggcagaagaattgcttgaacccgggaggcagaggttgcggtgagccgagatcgtgccattgcactccagcctgggc i chlSab2.chr6 I 51 I 1179 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=11464.000000 s hg38.chr19_GL949747v2_alt 65142 36 + 729520 -gacagagcaagactccaactcggaaaaaaaaaaaaa s panTro4.chr19 58998915 35 + 63644993 -gacagagcaagactccaactcgg-aaaaaaaaataa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875334 34 + 60714840 -gacagagcgagactccatctcag--aaaaaaaataa i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47059352 37 + 51301725 aatgagagcaaaactctgtctcaaaaaaaaaaaaaaa i papAnu2.chr19 C 0 I 1323 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770484 1179 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=273.000000 s hg38.chr19_GL949747v2_alt 65178 1 + 729520 t s panTro4.chr19 58998950 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875368 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=58931.000000 s hg38.chr19_GL949747v2_alt 65179 177 + 729520 aataaTTGTGTGAGCCCTTTTCTCTCTGTCCTCTCCTCTTTCTT--------GGGGCTCAGAACCAGAAATTAAAGCTACATGTTGATAAAAGCAAAACCATCCCACCTTAACAAGTAAATCGT-TGAGATTG-CCCAGTGATTTACTGTTAAGTGAGAGAGAGGTACATTTATATCTAGTTTTTTT s panTro4.chr19 58998951 173 + 63644993 aataaTTGTGTGAGCCCTTTTCTCTCTGTCCTCTCCACTTTCTT--------GGGGCTCAGAACCAAAAATTAAAACTACATGTTGATAAAAGCAAAACCATCCCACCTTAACAAGTAAATCGT-TGAGATTG-CCCAGTGATTTACTGT----TGAGAGAGAGGTACATTTATATCTAGTTTTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875369 177 + 60714840 aataaTTGTGTGAGCCCTTTTCTCTCTGTCCTCTCCACTTTCTT--------GGGGCTCAGAACCAGAAATTAAAGCTACATATTGATAAAAGCAAAACCATCCCACCTTAACAAGTAAATCGT-TGAGATTG-CCCAGTGATTTACTGTTAAGTGAGAGAGAGGTACATTTATATCTAGTTTTTTT i ponAbe2.chr19 C 0 C 0 s canFam3.chr1 19567163 172 - 122678785 aatgattgttt----ctctctgtctctgtctttctctcttcctcctttcatgctgcctCAGAACCACACCGGAAAACTGCATGTTGACAAGAGCAAAGCTGTT-----------GGTAAACAGTCCCAGACTGTTTCAACTATATACTGTGAAGTGAAAGAGACATAAAATCATAATAGGTTTTTTT i canFam3.chr1 I 1177 I 8 e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=86474.000000 s hg38.chr19_GL949747v2_alt 65356 335 + 729520 CCGGTGGTGAAGGAGATtctttttttctctctctctctcttttttatgagatggagcttggctcttgttgcccaggctggagtgcaatggcacgacctcggctcagtgaaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgcaccaccacaccaggctaattttttgtatttagtagagacagggtttcaccatgttaatcaggctgctctcgaactcctgacctcaggtgatccacctgccttggcctcccaaagtgctaggattacaggtgtgcgccactgcacctggccGGGAGA s panTro4.chr19 58999124 334 + 63644993 CCGGTGGTGAAGGAGAttc-ttttttctctctctctctcttttttattagatggaggttggctcttgttgcccaggctggagtgcaatggcacgaccttggctcactgaaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgcaccaccacaccaggctaattttttgtatttagtagagacggggtttcaccatgttaatcaggctgctctcgaactcctaacctcaggtgatccacctgccttggcctcccaaagtgctaggattacaggtgtgcgccactgcacctggccGGGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875546 327 + 60714840 CCGGTGGTAAGGGAGAttc-tttttt-------tctctcttctttatgagatggagcttggctcttgttgcccaggctggagtgcaatggtatgacctccactcactgaaacctccgcctcccaggttcaagtgattctcctgcctcagccccctgagtagctgggattacaggcatgcaccaccacaccaggctaattttttgtatttagtagagacggagtttcaccatgttagtcaggctgctctcgaactcctgacctcaggtgatccacccgtcttggcctcccaaagtgctaggattacaggtgtgtgccactgcacctggccGGGAGA i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19567335 8 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=102014.000000 s hg38.chr19_GL949747v2_alt 65691 286 + 729520 TTCTTTTTTACAACAGCTTAAAGTGCTCTGTAACCAATACACTATGCAGTGATTTGGTTAATACTTt-----gtgagttccatgagtgcagggtttatgtctgctattgctccccactggaccgccggactctagcacaatg---ccatgcacggtagacattgaatacatgagtgatacgaggatgaat-GAGACTAGGGGAAATC---------------AGTGGAAGCCCTAggcctggcacagtgactcactcctggaatcccagcactttgggaggccaaggaaggaggatggcttgaggccagg s panTro4.chr19 58999458 286 + 63644993 TTCTTTTTTACAACAGCTTAAAGTGCTCTGTAACCAATACACTATGCAGTGATTTGGTTAATACTTt-----gtgagttccatgagcgcagggtttacgtctgctattgctccccattggaccgccggactctagcacaatg---ccatgcacggtagacattgaatacatgagtgatacgaggatgaat-CAGACTAGGGGAAATC---------------AGTGGAAGCCCTAggcctggcgcagtgactcactcctggaatcccagcactttgggaggccaaggaaggaggatggcttgaggccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875873 286 + 60714840 TTCTTTTTTACAACAGCTTAAAGTGCTCTGTAACCGATACACTATGCGGTGATTTGGTTAATACTTt-----gtgagttccgtgagtgcagggtttacgtctgctattgctccccattggaccgccggactctagcacaatg---ccatgcacagtagacattgaatacatgagtgatacgtggatgaat-GAGACTAGGGGAAATC---------------AGTGGAAGCCCTAggcctggcgcagtgactcactcctggaatcccagcactttgggaggccaaggagggaggatggcttgaggccagg i ponAbe2.chr19 C 0 C 0 s canFam3.chr1 19567343 289 - 122678785 TCTTTTTTTACATCAGCTCAAAGTGCTCCCTCATCAATACAGTGAGTAGCAATTTGGTTAATGCTTTTCTCAGCGagcatcatgagattagggtttatgcctgctgtcattccccgcttgtccccagcac-ccagcacagtgcccccccacatggagggcattgaaaaaatgtgtgccaagtggatgaatGGGGACCTGGGGGAAGCAAGATTGGGGACCGAAGTGTAAGTCCTAAG--------GGTGAA-CATACCTGGGTT--------TGTGGGAA---AAGGAAAGAGGTCTCATTGAAGCTAAG i canFam3.chr1 I 8 I 2288 e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=56804.000000 s hg38.chr19_GL949747v2_alt 65977 214 + 729520 cattcaagaccagcctggacaacatggtgagatcccatagctataaaaagtaaacaattagccgggcgcggtggctcacgcctgtaattccagcactttgggaggccgaggggggtggatcacgaggtcaatagatcgagaccatcctggccaacatggtgaaaccccatctctactaaaaatacaaaagttagctgggcatggtggtggcaca s panTro4.chr19 58999744 212 + 63644993 cattcaagaacagcctggacaacatggtgagaccccatagctataaaaaataaacaattagctgggcgcggtggctcacgcctgtaattccagcactttgggaggccgaggcgggcggatcacgaggtcaatagatcgagaccatcctggccaacatggtgaaaccccatctctactaaaaatacaaaagttagctgggcgtgttggtgg--ca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55876159 212 + 60714840 cattcaagaccagcttggacaacatggtgagaccccatagctataaaaaataaacaattagccgggtgcggtggctcacgcctgtaattccagcactttgggaggccgaggcgggcggatcacgaggtcaatagatcgagaccatcctggccaacatggtgaaaccccatctctactaaaaatacaaaagttagctgggcgtggtggtgg--ca i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19567632 2288 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=744930.000000 s hg38.chr19_GL949747v2_alt 66191 1475 + 729520 cgcctgtaatcccagcgactcgggagggcgaggcaggagaatcacttgaacccaagaggcggaggttgcagtgagccgagatcgcgtcattgcactacagcctggcaacagagcgagactccatctc-aa----------------aaaaaaaataataataatagtaataataaattggccaggcgtggtgatggcagtgttgtcattgctttaagaggcaggaacagggggaAAAGACCCAGCAGTCTAACCACACAGACAAGTCCCAAGTTAGGCACTTCTGTGTGTCTTGGGGGCTGTT------GATCAGAAATAACCTATGTGGATCACCCAGCAAAATGACCAGTATGAAAAGATGTTCAGTGGTAGAAAATGAAATAAGCATTGTGACTACAACTCACTCAATAAGCATTCATTGAACACTGGTCACTGGTAAACTGCTATGAAGAAATCTCAgctgggtgcggtggctcacgcttgtaatcccagcactttaaagggagaccaaggtgggcagatggatcactttaggtcaagcgttcgagaacagcctggccaacatggtgaaaccccatctctactaaaaacacaaaattagccgggcatggtggcaggtgcctgtaatcccagctacttgggaggctgaggcaggagaatcgtttgaacccgggaggtggagattgtagtgagctgagatcacaacactgcactccaacctgggaaacagagcaagactccatctcaaaaagaaaaaaaaTCTCAAGCTTATTGgatagataaatgcacaggtagatagatggatattgaatgaataaatagttcagtggattaaaa----actggttaatgaagaaatggatggg-taaatggatggaaatatgaatgaatgcatgatggataaggacaaatga---aatagacaaatgtacaaatgaaagcaaaggaaaaagagatgctcaatagaaatgaataaggatgagaatcaatgctagacatgaatgagtgaatggtgaatgaaggagtgattgaatggatgaatACATGGAGTTAAGTTGAAGTACAAACTCGGCCAAGACTTCTTTTTCTCTGCTTTGGGTGGAAATACATTTTTAAAAAAAGAGggccgggcacggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctgagtttgggagttcgaggccagcctgaccaacacagagaaaccctgtttctactcaaaatacaaaattagccaggtgtggtggctcacacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgtggtgagccgagatggcgccattgcactccagcctgggcaacaagagcgaaagtccacctcaaaaaaaata-----aaataa----aataaaataaaataaaaaaagagggaaaaagg--aaaaaaaaagaCtccctgatgtgccactgacttcctgtacatgtttagg s panTro4.chr19 58999956 1488 + 63644993 cgcctgtaatcccagcgactcgggaggccgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagccgagatcgcgtcattgcactacagcctggcaacagagcgagactccatctcaaa----------------aaaaaaaataataataatagtaataataaATTGGCCAGGCGTGGTGATGGCAGTGTTGTCATTGTTTTAAGAGGCAGGAACAGGGGGAAAAGACCCAGCAGTCTAACCACACAGACAAGTCCCAAGTTAGGCACTTCTGTGTGTCTTGGGGGCTGTTGATAAAGATCAGAAATAACCTATGTGGATCACCCAGCAAAATGACCAGTATGAAAAGATGTTCAGTGGTAGAAAGTGAAATAAGCATTATGACTACATCTCACTCAATAAGCATTCATTGAACACTGGTCACTGGTAAACTGCTATGAAGAAATCTCggctgggtgcggtggctcacgcttgtaatcccagctctttaaagggagaccaaggtgggcagatggatcactttaggtcaagcgttcgagaacagcctggccaacatggtgaaaccccatctctactaaaaacacaaaattagccgggcatggtggcaggtgcctgtaatcccagctacttggcagcctgaggcaggagaatcgtttgaacccgggaggtggagattgtagtgagctgagatcacaacactgcactccaacctgggaaacagagcaagactccatctcaaaaagaaaaaaaaTCTCAAGCTTATtggatagataaatgcacaggtagatagatggatattgaatgaataaatagttcagtggattaaaa----actggttaatgaagaaatggatggg-taaatggatggaaatatgaatgaatgcatgatggataaggacaaatga---aatagacaaatgtacaaatgaaAGCAAAGGAAAAAGAGATGCTCAATAGAAATGAATAAGGATGAGAATCAATGCTAGACatgaatgagtgaatggtgaatgaaggagtgattgaatggatgaatACATGGAGTTAAGTTGAAGTACAAACTCGGCCAAGACTTCTTTTCCTCTGCTTTCGGTGGAAATACGTTTTTAAAAAAAGAGggccgggcacggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctgagtttgggagttcgaggccagcctgaccaacacagagaaaccctgtttctactcaaaatacaaaattagccaggtgtggtggctcacacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcggtgagcggagatggcgccattgcactccagcctgggcaacaagagcgaaagtccgcctcaaaaaaaaaaaaaataaataa----aataaaataaaataaaaaaagagggaaaaagg-aaaaaaaaaagaCtccctgatgtgccactgacttcctgtacacgtttagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55876371 1477 + 60714840 cgcctgtaatcccagtgactcgggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagatcgtgccattgcactccagcctggcaacagagtgagactccatctc-----------------------aaaataataataataataataataaattggccaggcgtggtgATGGCAGTGTTGTCATTGTTTTAAGAGGCAGGAACAGGGGGAAAAGACCCAGCAGTCTAAGCACACAGACAAGTCCCAAGTTAGGCACTTGTGTGTGTCTTGGGGGCTGTTGATAAAGATCAGAAATGACCTATGTGGATCACCCAGCAAGATGACCAGTATGAAAAGGTGTTCAGTGGTAGAAAGTGAAATTAGCATTATGACTACAACTCACTCAATAAGCATTCATTGAACACTGGTCACTGGTAAACTGCTATGAAGAAATCTCagctgggtgcggtggctcacgcttgtaatcccagcactttaaagggagaccaaggtgggcagatggattacttgagttcaggggttcgaaaacagcctggccaacatggtgaaaccccatctctactaaaaacacaaaattagctgggcatggtggcgggtgactgtaatcccagctacttgggaggctgaggcaggagaatcgtttgaacctgggaggtggagattgtagtgagccgagatcacaacactgcactccaacctgggaaacagagcgagactccatctcaaaaag-aaaaaaaTCTCAAGGTTATtggatagataaatgcataggtagattgacggatattgaatgaataaatagttgagtggattaaaaactgactggttaatgaagagatggatgggttaaatggatggaaatatgaatgaatgaatgatggataaagacaaatga---aatagacaaatgtacaaatgaaAGCAAAGGAAAAAGAGATGCTCAATAGA----AATAAGGATGAGAATCAACGCTAGACatgaatgagtgaacggtgaatgaaggagtgattgactggatgaatACACAGAGTCAAGTTGAAGTACAAACTCGGCCAAGACTCCTTTTTCTTCGCTTTGGGTGGAAATAAGTTTTTAAAAAAAGAGggctgggcacggtggctcacgcctgtaatcccagccctttgggaggccgaggcgggtggatcacctgagtttgggagttcgaggccagcctgaccaacatggagaaaccccgtttctactcaaaatacaaaattagccaggagtggtggcgcacgcctgtaatcccagctactcaggaggctgagccaggagaatcacttgaacctgggaggcagaggtcgcggtgagccgagatcgcgccattgcactccagcctgggcaacaagagcgaaactccgcctc-aaaaaaata-----taataatattaataaaataaaataaaaaAAGAGAGAAAAAGA-AAAAAAAAAAGACT-CCTGATGTG-CACTGACTTCCTGTACACATTTAGG i ponAbe2.chr19 C 0 I 762 s nomLeu3.chr10 102636777 1497 - 106955855 cgcctgttatcccagcgactcaggaggatgaggcaggagaattgcttgaactcaggaggcagaggttgcagtgagacgagttcgcgccattgcactacagcctggcaacagagcgagactccatctcaaataataataataataataataataataataataataataataataaATTTGCCAGGCGTGGTGGTGGCAGTGTTGTCATTGTTTTAAGAGGCACGAACAGGGGGAAAAGACCCAGCAGTCTAACCACACAGACGAGTCCCAAGTTAGGCACTTGTGTGTGTCTTGGGGGCTGTTGATAAAGATCAGAAATAACCTATGTGGATCACCCAGCAAAATGACCAGTGTGAAAAGGTGTTCAGTGGTAGAAAGTGAAATTAGCATTATGACTACAACTCACTCAATAAGCATTCATTGAACACTGGTCACTGGTAAACTGCTATGAAGAAATCTCggctgggtgcagtggctcacgcttgtaatcccagcactttaaagggagaccaaggtgggcagatggatcacttgaggtcaggggttcgagaacagcctggccaacatggtgaaaccccatctctgctaaaaacacaaaattagccaggcatggtggcgggtgcctgtaatcccagctacttgggaggctgaggcaggagaattgtttgaacccaggaggtggagattgtagtgagccgagatcacagcactgcactccaacctgggaaacagagcgagactccacctcaaaaag-aaaaaaaTCTCAAGGTTATTGGATAGATAAATGCATAGGTAGATTGACGGACATTGAATGAATAAATAGTTGAGTGGATTAAAAACTGACTGGTTAATGAAGAGATGGATGGG-TAAATGGATAGAAATATGAATGAATGAATGATGGATAAGGACAAGTGAAATAATAGACAAATGTACAAATGAAAGCAAAGGAAAAAGAGATGCTCAATAGAAATAAATAAGGATGAGAATCAACGCTAGACATGAATGAGTGAATGGTGAATGAAGGAGTGATTGAATGGAGGAATACATGGAGTCAAGTTGAAGTACAAACTCGGCCAACACTACTTTTTCTTTGCTTTGGGTGGAAATAAGTTTAAAAAAAAAGAGggccgggcacggtgactcacgcctgtaatcccagcagtttgggagactgaggcgggtggatcacctgagtttgggagttcgaggccagcctgaccaacatggagaaaccccgtttctactcaaaatacaaaattagccaggagtggtggcacacacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccgggaagcagaggtcatggtgagccgagatcacgccattgcactccagcctgggcaacaagagcgaaattccgtctcaaaaataata-------ataa-----------taaaataaaaaaagaGGGAAAAAGGAAAAAAAAAAAGACtccctgatgtgccactgacttcctctacacatttagg i nomLeu3.chr10 M 1542 C 0 e canFam3.chr1 19567632 2288 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=104626.000000 s hg38.chr19_GL949747v2_alt 67666 415 + 729520 taaacttaatatcacctctctttccaccattttcccatttataaagtgggaagactggatttgatgacatcacagcctcatccaggtctgGTGCCTTCCTTATAACCTGCGTCTCTTCtttattctttttttttttttttttttttttgagacggagttttgctctgtcacccaggctggagtgtgcagtgatgcaatctcggctcactacaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcgcccgccaccacgcccggctaatttttgtatttttagtagagacggggtttcaccatgttgtccaggctggtctcgaacttctgacttcgtgatccacctgcctcggcctcccaaagtgctaggatcacaggtgtgag s panTro4.chr19 59001444 407 + 63644993 taaacttaatatcacctctctttccaccattttcccatttataaagtgggaagactggatttgatgacatcacagcctcatccaggtctgGTGCCTTCCTTATAACCTGCGtctcttctttattc--------tttttttttttttttgagacggagtttcgctctgtcacccagactggagtgtgcagtgacgcgatctcggctcactacaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcgcccgccaccacgcccagctaatttttgtatttttagtagagacggggtttcaccatgttgtccaggctggtctcgaacttctgacttcgtgatccgcctgcctcggcctcccaaagtgctaggatcacaggtgtgag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102638274 410 - 106955855 gaaacttaatatcgcctctctttccaccattttcccatttataaagtgggaagactggatttgatgacatcacagcctcatccaagtctgGTTCCTTCCTTATAACCTGGGTCTCTTCtttattc-tttttgtttttgtttttgttttgagacggagtttcg--ctgtcacccaggctgga--gtgcagtggtgcgatctcggctcactgcaatgtctgcctcctgggttcaagcaattatcctgcctcagcctcccgagtagctaggattacaggcacccgccaccacgcccggctaatttttgtatttttagtagacacggggtttcaccatgttggccaggctggtctcgaacttctgacttcgtgacccgcctgcctctgcctcccaaagtgctaggatcacaggtgtgag i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19567632 2288 - 122678785 I e ponAbe2.chr19 55877848 762 + 60714840 I e calJac3.chr22 45333611 1953 + 49145316 I e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=19940.000000 s hg38.chr19_GL949747v2_alt 68081 39 + 729520 ccagcacccccggcTTATTCCTTTTTTAAAATTGTTATT s panTro4.chr19 59001851 39 + 63644993 ccagcacccccggcTTATTCCTTTTTTAAAATTGTTATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55878610 39 + 60714840 CCAGCACCCCCGGCCTATTCCTTTTTTAGAATTATTATT i ponAbe2.chr19 I 762 C 0 s nomLeu3.chr10 102638684 39 - 106955855 ccagcacccccagtcTATTCCTTTTTTAAAATTATTATT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19567632 2288 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=102233.000000 s hg38.chr19_GL949747v2_alt 68120 163 + 729520 ATTTCCCACAGCCACATA----TGCCGGGGAGGTTGTCCCACATATGTTCTACCAAGGCCC--CTCTGGCACTGAGATCAAACCCCGGAAGACCCGCTC---AGTCTCTCCTCCCGTCTTTTCAAC--ACGTTAGCGCCCCCAGGTGGCTAATTAGACTTCAAAA-TTCAGTTCT s panTro4.chr19 59001890 163 + 63644993 ATTTCCCACAGCCACATA----TGCCAGGGAGGTTGTCCCACATATGTTCTACCAAGGCCC--CTCTGGCACTGAGATCAAACCCCGGAAGACCCGCTC---AGTCTCTCCTCCCGTCTTTTCAAC--ACGTTAGCGCCCCCAGGTGGCTAATTAGACTTCAAAA-TTCAGTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55878649 165 + 60714840 ATTTCCCACAGCCACAAA----TGACAGGGAGGTTGTCCTGGATATGTTCTACCAAGGCCCGACGTTGGTACTGAGATCAAAGCCCAGAAGACCCGCTC---AGTCTCTCCTCCCATCTTTTCAAC--ACGTTAGTGCCCCCAGGTGGCTAATTAGACTTCAAAA-TTCAGTTgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102638723 165 - 106955855 ATTTCCCACAGCCACTTA----TGCCAGGGAGGTTGTCCCGGATATATTCTACCAAGGCCCCACGCTGCTACTGAGGACAAACCCCGGAAGACCCGTTC---AGTCTCTCCTCCCATCTTTTCAAC--ACGTCAGCGCCCCCACGTGGCTAATTAGACTTCAAAA-TTCAGTTCT i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19569920 174 - 122678785 ACTTCCGATATCCACACACAGTTCACAGAGAGATTGCCCAGGACATGCTCCACAGGAGTCCC-CACTGGTACTAAGTGCAAACCCAGAAAGTCCTGCTTGGAAGTCCCTCCTCTTGTCTCTTCAGCAAAAGTCAATGAACCCAGGTGGCTACTTTGATTCCAAAATTTCAGTGCT i canFam3.chr1 I 2288 I 1432 e calJac3.chr22 45333611 1953 + 49145316 I e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=546.000000 s hg38.chr19_GL949747v2_alt 68283 1 + 729520 T s panTro4.chr19 59002053 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55878814 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102638888 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19570094 1432 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=80258.000000 s hg38.chr19_GL949747v2_alt 68284 108 + 729520 gaggcgggcggatcacttgaggtcaggagttcaagaccagtctggtcaacatggtgaaaccccgtctctactaaaaatac---aaacattagccggacatggtggtacgca s panTro4.chr19 59002054 108 + 63644993 gaggtgggcggatcacttgaggtcaggagttcaagaccagtctggtcaacatggcgaaaccccgtctctactaaaaatac---aaacattagccggacatggtggtacgca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55878815 108 + 60714840 gaggcgggcggatcacctgaggtcaggagttcaagaccagtctggccaacatggcgaaaccccctctctactaaaaatac---aaacattagccagacatggtgttacgca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102638889 108 - 106955855 gaggcgggcggatcacctgaggtcaggagttcaagaccagtctggccaacgtggcgaaaccccgtctctactaaaaatac---aaacattagccagacatggtggcatgca i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47060712 108 + 51301725 gagacgggcggatcac--gaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaaaatacaaaaaactagccgggcgaggtggcg-gcg i papAnu2.chr19 I 1323 C 0 e canFam3.chr1 19570094 1432 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e chlSab2.chr6 46770484 1179 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=101500.000000 s hg38.chr19_GL949747v2_alt 68392 100 + 729520 cctgtaatcccagctattcgggaggccgaggcaggtggatcacttgaggtcaggag----------------ttcgaga---------------cca-cctggccaatttggcaaaactccatctctactaa s panTro4.chr19 59002162 101 + 63644993 cctgtaatcccagctattcgggaggccgaggcaggtggatcacttgaggtcaggag----------------ttcgaga---------------ccaccctggccaatttggcaaaactccatctctactaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55878923 101 + 60714840 cctgtaatcccagctattcggaaggccgaggcaggtggatcacttgaggtcaggag----------------ttcgaga---------------ccaccctggccaatttggcaaaactccatctctactaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102638997 101 - 106955855 cctgtaatcccagctatttgggaggccgaggcaggtggatcacttgaggtcaggag----------------ttcgaga---------------ccaccctggccaatttggcaaaactccatctctactaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47060820 132 + 51301725 cctgtagtcccagctacccgggaggctgaggcaggagaatggcgtaaacccgggaggcggagcttgcagtgagctgagatccggccactgcattccagcctgggcgacagagcgagactccgtctcaaaaaa i papAnu2.chr19 C 0 I 17 s chlSab2.chr6 46771663 101 + 50890351 cctgtaatcccagcactttgggaggctgaggccgatggatcacttgaggtcaggag----------------tttgaga---------------ccaccctggccaatatggctaaactccatctctattaa i chlSab2.chr6 I 1179 C 0 e canFam3.chr1 19570094 1432 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=195938.000000 s hg38.chr19_GL949747v2_alt 68492 108 + 729520 aaatacaaaaattagctgggcgtgat-agcgcacacctgtaatcccagctactcaggagactgaggcacgagaatcacttgaacccgggaggcggatgttgcagtgaac s panTro4.chr19 59002263 108 + 63644993 aaatacaaaaattagctgggcgtgat-ggcgcacacctgtaatcccagctactcaggagactgaggcacgagaatcacttgaacccgggaggcggatgttgcagtgaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55879024 108 + 60714840 aaatacaaaaattagctgggcgtgat-ggcgcacacctgtaatcccagctactcaggagactgaggcacgagaatcacttgaacccgggaggcagaggttgcagtgaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102639098 108 - 106955855 aaatacaaaaattagctgggcgtgat-ggcgcacacctgtaatcccagctactcaggaggctgaggcacgagaatcatttgaacccaggaggcggagattgcagtgaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59925501 108 + 64156825 aaatacaaaacttagctgggcgtggt-ggtgtacacctgtaatcccagctactcaggaggctgaggcacgagaatcacttgaacccaggaggcggaggttgcagtgaac i rheMac3.chr19 I 2242 C 0 s papAnu2.chr19 47060969 108 + 51301725 aaatacaaaacttagctgggcgtggt-ggtgcacacccgtaatcccagctactcaggaggctgaggcacgagaatcacttgtacccgggatgtggaggttgcagtgaac i papAnu2.chr19 I 17 C 0 s chlSab2.chr6 46771764 109 + 50890351 aaatacaaaacttagctgggcgtggtgggtgcacacctgtaatcccagctactcaggaggctgaggcacgagaatcacttgaacccaggaggcggaggttgcagtgaac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19570094 1432 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=660226.000000 s hg38.chr19_GL949747v2_alt 68600 325 + 729520 cgagatcacgccactgcactccagcctgggtg---gagtgagatcttctctc-aaaaaaaaaaaagaaagaaag------------aaagaaaaagtcgtgcttgatTATGCTTGA-TGGCAAAAAGGTGAGACCTTCCTTTCGGCACTGAGTCTGGTAGAAATCGGTGTTACAGGGtagctaacatttattgaacacttactacgggccagttactgctttaaatgttttatgtgtattacccactgaatcctacaacaatcctatgaagtgggttttatcagtgcatccattttaccgtcaaggcaagagagAGTTGGGGAAGGGCGCTTTCTGAATGCT s panTro4.chr19 59002371 332 + 63644993 cgagaccacgccactgcactccagcctgggtg---gagtgagatcttctctcaaaaaaaaaaaaagaaagaaagaa------agaaaaAGAAAAAGTCGTGCTTGATTATGCTTGA-TGGCAAAAAGGTGAGACCTTCCTTTCGGCACTGTGTCTGGTAGAAATCGGTGTTACAGGGtagctaatatttattgaacacttactacgggccagttactgctttaaatgttttatgtgtattacccactgaatcctacaacaatcctatgaagtgggttttatcagtgcatccattttaccgtccgggcaagagagagctggggaaggGCGCTTTCCGAATGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55879132 335 + 60714840 cgagatcgtgccactgcactccagcctgggtg---gagtgagatcttctctcaaaaaaaaaaaaaaaagaaaagaaaa---gaaaGAAAGAAAAAGTTGTGCTTGATTATGCTTGA-TGGAAAAAAGGTGAGACCTTCCTTTCGGCACTGAGTCTGGTAGAAATCGGTGTTACAGGGtagctaacatttattgagcacttactacgggccagttactgttttaaatgttttgtgtgtattacccactgaatcctacaacaatcctatgaagtgggttttatcagtgcatccattttaccgtcaaggcaagagagagttggggaagGGCGCTTTCTGAATGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102639206 327 - 106955855 cgaaatggcgccactgcactccagcctgagtg---gagtgaaatcttctctcaaaaaaaaaaaaaaaaggaaag--------aaagaaaaAAAAAGTTGTGCTTGATCATGCTTGA-TGGAAAAAAGGTGAGACCTTCCTTTCGACACTGAGTCTGGTAGAAATCGGTGTTACAGGGtaactaacgtttattgagcact---tacgagccagtcactgttttaaatattttatgtgtattacccactggatcctacaacagtcctatgaagtgggttttatcagtgcatccattttaccgtcaaggcaaGACAGAGTTGGGGAAGGgtgctttctgaatgct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59925609 314 + 64156825 cgagatcgtgccactgccctccagcctgggtgatagagtgagatcttctctc--------------------------caaaaaaaaaaaaaaaaGTTGTGCTTGATTATGCTTGA-TGGAAAAAAGGTGAGACCTTCTTTTCGGCAATGAGTCTGGTAGAAATCGGTGTAATAGGGtagctcacattcattgagcacttactacgggccagttactgttttaaatgttttatatgtattacccactgaatcctacaacaatcctatgaaatggcttttatcagtgcatccatttcacCGTCCAGGCGAGAGAGAGTT-GGGAAGGGCGCTTTCTCAATGCT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061077 311 + 51301725 cgagatcgtaccactgcactccagcctgggtgatggagtgagatcttctctc-----------------------------aaaaaaaaaaaaaagttgtgcttGATTATGCTTGA-TGGAAAAAAGGTGAGACCTTCTTTTCGGCAATGAGTCTGGTAGAAATCGGTGTAATAGGGTAGCTcacattcattgagcacttactacGGGCCAGttactgttttaaatgttttatatgtattaccCACTGAATCCtacaacaatcctatgaaatGGGTTTTATCAGTGCATCCATTTCACCGTCCAGGCGAGAGAGAGTT-GGGAAGGGCGCTTTCTCAATGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46771873 340 + 50890351 cgagattgcgccactgcactccagcctgggtgatggagtgagatcttctctcaaaaaaaacaaaacaacaacaaaaaaaaaaaaaaaaaaaaaaaGTTGTGCTTGATTATGCTTGA-TGGAAAAAAGGTGAGACCTTCTTTTCAGCAATGAGTCTGGTAGAAATCGGTGTAATAGGGtagctcacattcgttgagcacttactacgggccagttactgttttaaatgttttatgtgtgttatgcactgaatcctacaacaatcctatgaaatgggttttatcagtgcatccatttcacCGTCCAGGCGAGAGAGAGTT-GGGAAGGGCGCTTTCTCAATGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45335564 302 + 49145316 caagattgaaccactgcactccagcctgggcgacagagtgagactttc-------------------------------------aaaaaaaaaaaTTGTGTTTGATTATGCTTAATTTAAAAAAAGGTGAGACCTTCCTTTCG---CTGAGTCTGGTAGAAATCGGTGTTATAGGatagctaacattcactgagaatttactgcaagccagttactgttttaagtgttggatgtgtgttacccactgaatcctacaacaattctatgaagtaggttttatcagtgcgtccatattaccgtcaaggcaagagagagttggggaagggcactttccgaatgct i calJac3.chr22 I 1953 I 5 e canFam3.chr1 19570094 1432 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=427330.000000 s hg38.chr19_GL949747v2_alt 68925 310 + 729520 GCTACcgtgtccagagttggttccttcctgtgggtttgtggtctcgctgactttaagaatggagccagggaccttcgtggtgagtgttacagcgcttaaagatggcacggacctaaagagttagcagcagcaagatttattgtgtagagcaagagaacaaagctcccacagcgtggaagcagactctggtggggtgccgc-gctcgccagcttttattccctta-ttgtccccgcccatgtcctgctgattggtccattttacagagc------------------------gctgattggtccatcttacagagtgctgattggtccattttaca s panTro4.chr19 59002703 334 + 63644993 GCTACcgtgtccagagttggttccttcctgtgggtttgtggtctcgctgactttaagaatggagccagggaccttcgtggtgagtgttacagcgcttaaagatggcacggacctaaagggttagcagcagcaagatttattgtgtagagcaagagaacacagctcccacagcgtggaagcggactctggtggggtgccgc-gctggccagcgtttattccctta-ttgtccccgcctatgtcctgctgattggtccattttacagagcactgattggtccatcttacagagtgctgattggtccattttacagagtgctgattggtccattttaca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55879467 305 + 60714840 GCTACtgtgtgcggagttggttccttcctgtgggtttgtggtctcgctgactttaagaatggagccagggaccttcgtg----gtgttacagcacttaaagatggcacggacctaaagagtttgcagcagcaagatttattgtgtagagcaagagaacaaagcttccacagcgtggaagggaactctggtgcggtgccgc-gctggctagcttttatt-cctta-ttctccccatccatgtcctgctgattggtccattttacagagc------------------------gctgattggtccatcttacagagtgcagattggtccattttaca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102639533 310 - 106955855 gctactgtatctggagttggttccttcctgtgggtttgaggtctcgctgactttaagaatggagccacggaccttcgtggtgagtgttacagcacttaaagatagcacacacctaaagagttggcagcagcaagatttattgtgtagagcaagagaacaaagcttccacagtgtggaagaggactctagcagggtgccgc-gccggctagcttttattccctta-ttgtccccgcccatatcctgctgattggtccattttacagagc------------------------gctgattggcccatcttacagagtactgattggtccattttaca i nomLeu3.chr10 C 0 I 1535 s rheMac3.chr19 59925923 263 + 64156825 GCCACcgcgtccggagttggttccttccagtgggtttgtggtctagctgacttcaagaatgcagccccagaccttcgcggtgagtgtcacagctcttaaagatggcatggaccc-aagagtgagcagcagcaaaatttattgtgaagagcaagagaacacagcttccacagcctggaaggggacccgagcagggtgccaatgctggctagcttttattcccttatttgtccccgcccatgtcct------------------------------------------------gctgattggtccattttaca------------------------ i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061388 287 + 51301725 GCCACCGCCTCgggagttggttccttccagtgggtttgtggtctggctgacttcaagaatgcagccgcagaccttcgcggtgagtgtcacagctcttaaagatggcatggaccc-aagagtgagcagcagcaaaatttattgtgaagagcaagaGAACACAGCTTCCACAGcctggaaggggacccaagcaggttgccgctgctggctagtttttattcccttatttgtccccgcccatgtcctgctgattggtccactttacagagc------------------------gctgattggtccattttaca------------------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772213 287 + 50890351 GCCACcgcgtccggagttggtt-cttccagtgggtttgtggtccggctgccttcaagaatgcagccgcagaccttcgcggtgagtgtcacagctcttaaagatggcatggacccaaagagtgagcagcagcaaaatttattgtgaagagcaagagaacacagcttccacagactggaaggggacccaagcaggttgccgctgctggctagtttttattcccttatttgtccccgcccatgtcctgctgactggtccactttacagagc------------------------gctgattggtccattttaca------------------------ i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19570094 1432 - 122678785 I e calJac3.chr22 45335866 5 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=158443.000000 s hg38.chr19_GL949747v2_alt 69235 92 + 729520 atcctcttgtaagacagaaaagttctccaggtccccattcaacccaggaagtccagctggcttcacgtctcaCTACTACCTTTCTGTAGCTG s panTro4.chr19 59003037 92 + 63644993 atcctcttgtaagacagaaaagttctccaggtccccattcaacccaggaagtccagctggcttcacgtctcaCTACTACCTTTCTGTAGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55879772 92 + 60714840 atcctcttgtaagacagaaaagttctccaagtccccattcaacccagaaagtccagctggcttgacgtctcaCTACTACCTTTCTGTAGCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102641378 88 - 106955855 atcctcttgta----agaaaagttctccaagtccccattcaacccaggaagtccagctggcttcacctctcaCTACTACCTTTCTGTAGCTG i nomLeu3.chr10 I 1535 C 0 s rheMac3.chr19 59926186 92 + 64156825 atcctcttgtaagacagaaaagttctccaagcctccactcgatccaggaggtccagctggcttcccctctcaCTGCTACCTCTCTGTAGCTG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061675 92 + 51301725 atcctcttgtaagacagaaaagttctccaagctTCCACTCGACCCAGGAGGTCCAGCTGGCTTCCCCTCTCACTGCTACCTCTCTGTAGCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772500 92 + 50890351 atcctcttgtaagacagaaaagttctccaagcctccactcgacccaggaggtccagctggcttcccctctcaCTGCTACCTCTCTGTAGCTG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19570094 1432 - 122678785 I e calJac3.chr22 45335866 5 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=21685.000000 s hg38.chr19_GL949747v2_alt 69327 13 + 729520 CTACTACT---acagt s panTro4.chr19 59003129 13 + 63644993 CTACTACT---acagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55879864 13 + 60714840 CTACTATT---acagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102641466 13 - 106955855 CTACTACT---acagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926278 16 + 64156825 CTACTACTACcacagt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061767 16 + 51301725 CTACTACTACCACAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772592 16 + 50890351 CTACTACTACcacagt i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19571526 13 - 122678785 ctaatatc---ccagc i canFam3.chr1 I 1432 C 0 e calJac3.chr22 45335866 5 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=300960.000000 s hg38.chr19_GL949747v2_alt 69340 123 + 729520 gagtagacggcagtgctgggattcgaaccctctgtcttctggcttggaagtcttaaccactaATCGCGTCTTCCTTTCAGCTACTCCTTGGGAAAGGCCTGGAAAGAAGCTACAGCACAGGGC s panTro4.chr19 59003142 123 + 63644993 gagtagacggcagtgctgggattcgaaccctctgtcttctggcttggaagtcttaaccactGATCGCGTCTTCCTCTCAGCTACTCCTTGGGAAAGGCCTGGAAAGAAGCTACAGCACAGGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55879877 123 + 60714840 gagtggacggcagtgctgggattcgaaccctctgtcttctggcttggacgtcttaaccactGATCGCGTCTTCCACTCAGCTACTCCTTGGGAAAGGCCTGCAAAGAAGCTACAGCACAGGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102641479 123 - 106955855 gagtagacggcagtgctgggattcgaaccctctgtcttctggcttggaagtcttaaccactGATCACGTCTTCCACTTGGCTACTCCCTGGGAAACGCCTGGAAAGAAGCTACAGCACAGAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926294 123 + 64156825 gagtagacggcagcactgggattcgaaccctctgtcttctggcttggaagtcttaaccactGATCGCGTCTTCCACTCAGCTACTCGTTGGGAAAGGCCCGGAAAGAAGCCACAGCACAGGGC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061783 123 + 51301725 GAGTAGACGGCAGCGCTGGGATTCAAACCCTCTGTCTTCTGGCTTGGAAGTCTTAACCGCTGATTGCGTCTTCCACTCAGCTACTCCTTGGGAAAGACCCGGAAAGAAGCCACAGCACAGGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772608 123 + 50890351 gagtagacggcagcgctgggattcgaaccctctgtcttctggcttggaaatcttaaccactGATGGCGTCTTCCACTCAGCTACTCCTTGGGAAAGGCCCGGAAAGAAGCCACAGCACAGGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45335871 105 + 49145316 gagtagatggcag-gctgggattcgaaccc-cagtctcctggctcggaagccttaaccac----------------tcagctGCTCCTTGGGAAAGGCCCAGAGAGAAGCCACAGTGCAGGGC i calJac3.chr22 I 5 I 348 s canFam3.chr1 19571539 120 - 122678785 gagtgagcagcagcactgggactcaaaccc-aggcCTCGTGACTAGGAAGACACAACCATAGATAGAGCCTTCCACTGATCTACTAG--AGGAATGACCCAGAAGGGAGCTAGAGAACACAGT i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I a score=47980.000000 s hg38.chr19_GL949747v2_alt 69463 33 + 729520 ACAGCGGGGTCTA--AGGACCGTTCCGCGGAGCTC s panTro4.chr19 59003265 33 + 63644993 ACAGGGGGTTCTA--AGGACCGTTCTGCGGGGCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880000 33 + 60714840 ACAGGGGGGTCTA--AGGACCGTTCCGCGGGGCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102641602 33 - 106955855 ACAGGGGGGTCTA--AGGACCGTTCCACGGGGCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926417 33 + 64156825 ACAGGGGTGTCGA--AGGGCAGTTCCTCGGGGCTC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061906 33 + 51301725 ACAGGGGTGTCAA--AGGGCAGTTCCTCGGGGCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772731 33 + 50890351 ACAGGGGTGTCGA--AGGGCAGTTCCTCGGGGCTC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19571659 32 - 122678785 ---AGGAAGTTTATTGTGACTCAGAAGCTGAGCTC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45335976 348 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=44443.000000 s hg38.chr19_GL949747v2_alt 69496 19 + 729520 AGCCAGCAGGACTGTGGGG s panTro4.chr19 59003298 19 + 63644993 AGCCAGCAGGACTGCGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880033 19 + 60714840 AGCCATCAGGACTGCGGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102641635 19 - 106955855 GGCCAGCAGGACTGTGGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926450 19 + 64156825 AGCCAGCAGGGCTGCGGGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061939 19 + 51301725 AGCCAGCAGGGCTGTCGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772764 19 + 50890351 AGCCAGCAGGGCTGCGGGG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3610685 19 + 145441459 AGTCTGGAGGCCTAGAGTG i mm10.chr7 N 0 C 0 s canFam3.chr1 19571691 19 - 122678785 AGCCAGGAGGACTGAGGGG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45335976 348 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=1002574.000000 s hg38.chr19_GL949747v2_alt 69515 355 + 729520 CTGCAGGAAAGGACAGTCCA-GCCCAGGGTCCCAGCTTCTCCGCCACTCAGGTTGGAAG---TCTCGGGC---------------TGCAGTGCTCCTGGGGCTCAGGGGCGGATACCAGCAGGAGCGCGGTTCTGACTGCGCCAGTCAAAAGTGACCAGCGCGCCCAGGGAGATGAGGACCAGCCCGGCCAGCCCCAGGCGGACTAGGTTCCCCCGGGTGTAGTCGGAGGAGCCAGAGTCTGCGGGCGGAGCCGGGAGAGAGGGGCCATCAGCTCCCGGACCCCAAAGTCTGGGCCCTGAACTCCAGGTTTCCAGCCCCTGGGGTGGACTTAGGGACCTGACTCTACAGTCTCAAAGTtgagggggagtcgatg s panTro4.chr19 59003317 355 + 63644993 CTGTGGGAAAGGACAGTCCA-GCCCAGGGTCCCAGCTTCTCCGCCACTCAGGTTGGAAG---TCTCGGGC---------------TGCAGTACTCCTGGGGCTCAGGGGCGGATACCAGCAGGAGCGCGGTTCTGACTGCGCCAGTCAAAAGTGACCAGCGCGCCCAGGGAGATGAGGACCAGCCCGGCCAGCCCCAGGCGGACTAGGTTCCCCCGGGTGTAGTCGGAGGAGCCAGAGTCTGCGGGCGGAGCCGGGAGAGAGGGGCCGTCAGCTCCCGGACCCCAAAGTCTGGGCCCTGAACTCCAGGTTTCCAGCCCCTGGGGTGGACTTAGGGACCTGACTCCACAGCCTCAAAGTtgagggggagtcgatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880052 355 + 60714840 CTGCAGGAAAGGACAGTCCA-GCCCAGGGTCCCAGCTTCTCCGCTACTCAGGTTGGAAG---TCTCGGGT---------------TGCAGTGCTCCTGGGGCTCAGGGGCGGATACCAGCAGGAGCGCCGTTCTGGCTGCGCCAGTCAAAAGTGACCAGCGCGCCCAGGGAGATGAGGACCAGACCGGCCAGCCCCAGGCGGACAAGGTTTCCCCGGGTGTAGTCGGAGGAGCCAGGGTCTGCGGGCGGAGCTGGGAGAGAGGGGCCGTCAGCTCCCGGACCCCAAAGTCTGGGCCCTGAACTCCAGGTTTCCAGCCCCTGGGGTGGACTTAGGGACCTGACTCCACAGTCTCAAAGTtgagagggagtcgatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102641654 355 - 106955855 CTGCAGAAAAGGACAGTCCA-GCCCAGGGTCTCAGCTTCTCCGCCACTCAGGTTGGAAG---TCTCGGGT---------------TGCAGTGTTCCTGGGGCTCAGGGGCGGATACCAGCAGGAGCACGGTTCTGGCTGCGCCAGTCAAAAGTGACCAGCGCACCCAGGGACATGAGAACCAGACCGGCCAGCCCCAGGCGGACAAGGTTCCCCTGGGTGTAGTCGGAGGAGCCAGAGTCTGTGGGCGGAGCCGGAAGAGAGAGGCCATCAGCTCCCGGACCTCAAAGTCTGGGCCCTGAACTCCAGGTTTCCAGCCCCTGGGGTggacttagggacctgactccacagtctcaaagttgagggggagtcgatg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926469 357 + 64156825 CTGCAGGAAAGGACAATCCA-GCCCAGGGTCCCAGCCTCTCCATCACTCAGGTTGGAAGTCTTCTCGCGT---------------TGCAGTGCCCCTGGGGCTCAAGGGCGGACACCAGCAGGAGCACGGCTCTGGCTGCGCCAGTCAAAAGTGACCAGTGCGCCCAGGGAGATGAGGACCAGACCGGCCAGCCCCAGGCGGACAAGGTTCCCCCGAGTGTAGTCGGAGGAGCTAGAGTCTGCGGGCGGGGCCGGGAGAGACGGGTCGTCAGCTCCCGGATTCCGAAGTCTGGGCCCTGAACTCCAGGTTTCCAG-CCCTGGGGTggacttggggacctgactcctcagtctcaaagttgagggggagtcgatg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061958 356 + 51301725 CTGCAGGAAAGGAC-GTCCA-GCCCGGGGTCCCAGCCTCTCCATCACTCAGGTTGGAAGTCTTCTCGCGT---------------TGCAGTGCCCCTGGGGCTCAAGGGCGGACACCAGCAGGAGCGCGGCTCTGGCTGCGCCAGTCAAAAGTGACCAGTGCGCCCAGGGAGATGAGGACCAGACCGGCCAGCCCCAGGCGGACAAGGTTCCCCCGAGTGTAGTCGGAGGAGCTAGAGTCTGCGGGCGGAGCCGGGAGAGACGGGCCGTCAGCTCCCGGACCCCAAAGTCTGGGCCCTGAACTCCAGGTTTCCAG-CCCTGGGGTGGACTTGGGGACCTGACTCCTCAGTCTCAAAGTTGAGGGGGAGTCGATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772783 357 + 50890351 CTGCAGGAAAGGACAGTCCA-GCCCAGGGTCCCAGCTTCTCCATCACTCAGGTTGGAAGTCTTCTCGCGT---------------TGCAGTGCCCCTGGGGCTCAAGGGCGGACACCAGCAGGAGCGCGGTTCTGGCTGCGCCAGTCAAAAGTGACCAGTGCGCCCAGGGAGATGAGGACCAGACCGGCCAGCCCCAGGCGGACAAGATTCCCCCGAGTGTAGTCGGAGGAGCTAGAGTCTGCGGGCAGAGCCGGGAGAGGCGGGCCGTCAGCTCCCGGACCCCGAAGTCTGGGACCTGAACTCCAGGTTTCCAG-CCCTGGGGTggacttggggacctgactcctcagtctcaaagttgagggggagtcgatg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45336324 356 + 49145316 CCACAGGAAAGGACAGTCCA-GCCCAGGGTCCCAGCTTCTCTGCCACTCAGGTTGGAAGTCTTCTGGGGT---------------TGCAGCGCCCCTGGGGCTCAGGGGCGGACGCCAGCAGGAGCGTGGTTCTGGCTGCGACAGTCAAAAGCGACCAGCGCGCCCAGGGAGATGAGGACCAGACTGGCCAGTCCCAGGCGGACCAGGTTCTCCCTGGTGTAGTCGGAGGAGCTGGAGTCTGCGGGCCGAGCCGGGAGAGAGGGGCTGTCATCGCTTGGACCCAGAAGTCTAGGCCCTGAACTCCAGGTCTCCTGTCCCTggggtggacttaggggcctgactccccagtctgaaagttgaggggagtt--atg i calJac3.chr22 I 348 C 0 s mm10.chr7 3610704 318 + 145441459 -TTTCAGAGGGGCTGGTC---ACCAAGGATCCCAGCTTCTCTGTCCATC-TCCAGGCAG---TCTC-------------------TTCAGTTTTGCTGGGGC-------AGGAGACCATCAAAGGCAGAGCTCCTGCTGTGCCAATCACAAGTAACTATGATGCCCAAGCAGATGAGGACCATTCCTGCCAGCCCCAAACGGATGAGGTTTCCCTGGGTATAGTCCAAGGAGCCAGAACCTGCGAGCCAAAACGAGGGAGACAGGGTGTTGGTTC-TGTATCCCAGAGTCTTGTTGCTT--TTCTGTGTTTCTGA-CACACAGATGGAGTT-----------------GTCTCTAAGTTTA-ATGGAGTTGATG i mm10.chr7 C 0 C 0 s canFam3.chr1 19571710 364 - 122678785 CTCTTGAAAGGGCCTGTCCACCCCCAGGAAACCTATTTCTTCTCCCCATCTCTGGGAAGTCTTCTCACACTTGGAGGCATCTGTATCCAGT-CCTCTGGGGCTCAGGGCCTGACGCT-GCCTGGGTGCGACTCTGGCTGTGCCAGTCAAAAACAACCAGTGTGCCCAGGGAGATGAGGACCAGGCCAGCCAACCCCAGGCGGACGAGGTTGCTCTGAGTGTAGTCCAAGGAGCCTGAGCCTGTGGG----ACAGCAAGAGAGAGGCCTTCAGCTC-CAGAACCCAGAGTCTGGG-CCTGCCATCTGGGTCTTGAACCTACAGGGTGATACTGGGGACACAGCTCC-CAGTCTCAAAGTTGAGATGG-GTCAGTG i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I a score=53918.000000 s hg38.chr19_GL949747v2_alt 69870 21 + 729520 -------gaggcttcaactcctgggtcc s panTro4.chr19 59003672 21 + 63644993 -------gaggcttcaactcctgggtcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880407 21 + 60714840 -------gaggcttcaactcctgggtcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102642009 21 - 106955855 -------gaggcttcaactcctgggtcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926826 21 + 64156825 -------gaggtttcaactcctgggtct i rheMac3.chr19 C 0 I 1 s papAnu2.chr19 47062314 21 + 51301725 -------GAGGTTTCAACTCCTGGGTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46773140 21 + 50890351 -------gaggtttcaactcctgggacc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45336680 21 + 49145316 -------gaggcttcacttcgtgggtct i calJac3.chr22 C 0 I 293 s canFam3.chr1 19572074 28 - 122678785 GGAGCAGGGGTCCTGGACTCCTGGGTCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3611022 0 + 145441459 C e macFas5.chr19 54942282 1 + 59248254 I a score=77170.000000 s hg38.chr19_GL949747v2_alt 69891 31 + 729520 aggaagaaggggct-ggggcctggactgctgg s panTro4.chr19 59003693 31 + 63644993 aggaagaaggggct-ggggcctggactcctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880428 31 + 60714840 aggaagaaggggct-ggggcctggactcctgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102642030 31 - 106955855 aggaagaaggggct-ggggcctgcactcctgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926848 31 + 64156825 agggaggagggtct-ggggcctggactcccgg i rheMac3.chr19 I 1 I 2 s papAnu2.chr19 47062335 32 + 51301725 AGGAAGGAGggactgggggcctggactcctgg i papAnu2.chr19 C 0 M 1323 s chlSab2.chr6 46773161 32 + 50890351 aggaaggagggactgggggcctggattcctgg i chlSab2.chr6 C 0 I 2 s calJac3.chr22 45336994 31 + 49145316 agggaggagggact-ggggcctggactcctgg i calJac3.chr22 I 293 I 2 s canFam3.chr1 19572102 30 - 122678785 -GGGAGAAGGGGGT-AGAGTCATGACCCCTAG i canFam3.chr1 C 0 C 0 e mm10.chr7 3611022 0 + 145441459 C e macFas5.chr19 54942282 1 + 59248254 I a score=5254.000000 s hg38.chr19_GL949747v2_alt 69922 9 + 729520 atcaggaag s panTro4.chr19 59003724 2 + 63644993 at------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880459 9 + 60714840 atcaggaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102642061 9 - 106955855 atcaggaag i nomLeu3.chr10 C 0 M 1589 s rheMac3.chr19 59926881 9 + 64156825 ctgagggag i rheMac3.chr19 I 2 C 0 s chlSab2.chr6 46773195 9 + 50890351 ctgagggag i chlSab2.chr6 I 2 C 0 s calJac3.chr22 45337027 9 + 49145316 ccgagggag i calJac3.chr22 I 2 C 0 s canFam3.chr1 19572132 9 - 122678785 ACTGGGGAG i canFam3.chr1 C 0 I 4 e mm10.chr7 3611022 0 + 145441459 C e papAnu2.chr19 47062367 1323 + 51301725 M e macFas5.chr19 54942282 1 + 59248254 I a score=29011.000000 s hg38.chr19_GL949747v2_alt 69931 29 + 729520 gaggggctgggggcctggagtcctgggtc s ponAbe2.chr19 55880468 29 + 60714840 gaggggctgggggcatggagtcctgggtc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59926890 29 + 64156825 gaggggctgggggtctggactcccgggtc i rheMac3.chr19 C 0 M 1236 s chlSab2.chr6 46773204 29 + 50890351 gaggggccgggggcctggactcctgggtc i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45337036 28 + 49145316 gagggact-ggggcctggactcctgggtc i calJac3.chr22 C 0 I 1 s canFam3.chr1 19572145 29 - 122678785 GAGGAATCAGGGGCCTGGATCCTTGGGCT i canFam3.chr1 I 4 C 0 e mm10.chr7 3611022 0 + 145441459 C e nomLeu3.chr10 102642070 1589 - 106955855 M e papAnu2.chr19 47062367 1323 + 51301725 M e macFas5.chr19 54942282 1 + 59248254 I e panTro4.chr19 59003726 0 + 63644993 C a score=49811.000000 s hg38.chr19_GL949747v2_alt 69960 65 + 729520 ---caggaaggaggggctgggggcctggagtcctgggtctgaggg--aggaggtactggggcccgggaat s panTro4.chr19 59003726 65 + 63644993 ---caggaaggaggggctgggggcctggagtcctgcgtctgaggg--aggaggggctgggtcccaggaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880497 65 + 60714840 ---caggaaggagggactggcggcctggagtcctgggtctgaggg--aggaggtattggggcccgggaat i ponAbe2.chr19 C 0 I 221 s chlSab2.chr6 46773234 65 + 50890351 ---gagggaggagggaccgggggcctggactcctgggtctgaggg--aggaggggccgggggcctggact i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45337065 63 + 49145316 ---gagggaggaggg--ctggggcctggactcctgggtccgaggg--aggagggactggggtcctggact i calJac3.chr22 I 1 C 0 s canFam3.chr1 19572174 68 - 122678785 GGGGAGCAGGGAGAGGCTGGGAACCCAGACACCTGGGATAGGGAGCAGGGAGGAACCAGGTCTCAGAC-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3611022 0 + 145441459 C e nomLeu3.chr10 102642070 1589 - 106955855 M e papAnu2.chr19 47062367 1323 + 51301725 M e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59926919 1236 + 64156825 M a score=24438.000000 s hg38.chr19_GL949747v2_alt 70025 64 + 729520 -cctgggtct------------------------------------------------gagggaggaggagctggaggactagactcctggatctga-ggg---------aggaggggctggg- s panTro4.chr19 59003791 48 + 63644993 -cctgggtct------------------------------------------------gagggaggaggggctgcaggactagacccctgggtctga--------------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880783 64 + 60714840 -cctgggtct------------------------------------------------gagggaggaggggctggaggactagacccctgggtctga-ggg---------aggaggggctgga- i ponAbe2.chr19 I 221 C 0 s chlSab2.chr6 46773299 113 + 50890351 -cctgggtctgagggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgggtcgtggagggaggaggggccgggggtctgggctcctgggtctggaggg---------aggaggggccggg- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45337128 60 + 49145316 -gctgggtct------------------------------------------------gagggaggagg-gctgg-ggcctggactgctgggtccga-ggg---------aggagga--ctgg- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19572242 77 - 122678785 CCCAGGGTTGGG----------------------------------------------GAGCAGGGAGGAACCCGAGGCCTGGATCCCCTGGCTGGG-GAGTAGGGGCCAAGGTGGGGGCTGGA i canFam3.chr1 C 0 C 0 e mm10.chr7 3611022 0 + 145441459 C e nomLeu3.chr10 102642070 1589 - 106955855 M e papAnu2.chr19 47062367 1323 + 51301725 M e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59926919 1236 + 64156825 M a score=13869.000000 s hg38.chr19_GL949747v2_alt 70089 72 + 729520 tcccaggaatcctgggtctgaggg-aggaggggctgcagga----ctagacccctgggtctgaaggaggagaggctg s panTro4.chr19 59003839 14 + 63644993 ---------------------------------------------------------------aggaggagaggctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880847 72 + 60714840 ggactagacccctgggtctgaggg-aggaggggctgcggga----ctagacccctgagtctgaaggaggagaggctg i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 46773412 73 + 50890351 ggcctggactcctgggtctggggg-aggaggggctggggggc---ctgggctcctgggtctgggggaggaggggctg i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45337188 69 + 49145316 ggcctggactgctgggtccgaggg-aggagggct---gaggc---ctggactcctgggtctgagggaggag-ggctg i calJac3.chr22 C 0 C 0 s mm10.chr7 3611022 32 + 145441459 -----------------------------------------TCCCCTGGTCGCCTGGGTCTGAAGGAGGAGAG---- i mm10.chr7 C 0 C 0 s canFam3.chr1 19572319 55 - 122678785 --------TCCCTGGGCTGGGGAGTAGGGAGGAACAGGGGGC---CCGGACTCCTG-----------GCAGGGGCTG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102642070 1589 - 106955855 M e papAnu2.chr19 47062367 1323 + 51301725 M e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59926919 1236 + 64156825 M a score=37676.000000 s hg38.chr19_GL949747v2_alt 70161 36 + 729520 ggggcctgggctcctgggtctgagggcggaggtcct-- s panTro4.chr19 59003853 36 + 63644993 ggggcctgggctcctgggtctgagggcggaggtcct-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880919 36 + 60714840 ggggcctgggctcctgggtctgagggaggagggcct-- i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47063702 35 + 51301725 GGGACCTGGGCTCCT-GGTCTgagagaggaggggct-- i papAnu2.chr19 M 1323 C 0 s chlSab2.chr6 46773486 36 + 50890351 ggggcctgggctcctgggtctgggggaggaggggct-- i chlSab2.chr6 I 1 I 1 s calJac3.chr22 45337257 34 + 49145316 -gggcctggactcctgggtccgagggaggaggact--- i calJac3.chr22 C 0 C 0 s mm10.chr7 3611054 11 + 145441459 ----CCAGAGCTTCT----------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19572374 38 - 122678785 GGGGCCCGGACCCCTAGATTGGGGAGCAGGGAGGCACC i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102642070 1589 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59926919 1236 + 64156825 M a score=53795.000000 s hg38.chr19_GL949747v2_alt 70197 40 + 729520 ggggcctgcattcct-------ggggc----ggaggaggcgggCCGGGCCT s panTro4.chr19 59003889 40 + 63644993 ggggcctgcattcct-------ggggc----ggaggaggcgggCCGGGCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880955 40 + 60714840 ggggcctgcattcct-------ggggc----ggaggaggcgggccgggCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102643660 40 - 106955855 GGGGCCTGCATTCCT-------GGGGC----GGAGGAGGCGGGCCGGGCCT i nomLeu3.chr10 M 1589 C 0 s papAnu2.chr19 47063737 39 + 51301725 gggaccTGTATTCCT-------GGGGC----TGGGGAGACGGGCCGGCGG- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46773523 39 + 50890351 ggggcctgcgttcct-------ggggc----tggggagacgggccggcgg- i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45337291 39 + 49145316 ggggcctggactcct-------gggtccgagggaggcggCGGGCCG----- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19572412 46 - 122678785 GGAGGCCGGACTCCCCCGCCAGGGAGC----AGGGGCTGCGGCCGGGCGC- i canFam3.chr1 C 0 C 0 e mm10.chr7 3611065 0 + 145441459 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59926919 1236 + 64156825 M a score=1080960.000000 s hg38.chr19_GL949747v2_alt 70237 350 + 729520 CAGGGCCCTCACCTTCCCAGCTGATGACCAGCACCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGATAGTAGCAGCTGTAGGTGCCGGGGGCGCGGGCGCCCAGCAGCGTGAAGTCGGCCCAGGGCTGCGCGGAGTGGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCACGAAGCTCATGTTCCGCAGGCGGCCCGCGCAGCGCAGGCTCACGTTGGCGCCAGGACCCACCACCGGCCCGGGCAGCGCCACCAGCGACGGCCGCGGCAGCTCCTCTGC--AGAGACGGGGTGAGAGTCCGGGGCCGCGTGAGC---GTCTTCC---Gctcgctcgctc s panTro4.chr19 59003929 346 + 63644993 CAGGGCCCTCACCTTCCCAGCTGATGACCAGCACCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGATAGTAGCAGCTGTAGGTGCCTGGGGCGCGGGCGCCCAGCAGCGTGAAGTCGGCCCAGGGCTGTGCGGAGTGGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCGCGAAGCTCATGTTCCGCAGGCGGCCCGCGCAGCGCAGGCTCACGTTGGCGCCAGGAGCCACCACCGGCCCGGGCAGCGCCACCAGCGACGGCCGCGGCAGCTCCTCTGC--AGAGACGGGGTGAGAGTCCGGGGCCGCGTGAGC---Gtcttc-------cgctcgctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880995 350 + 60714840 CAGGGCCCTCACCTTCCCGGCTGATGACCAGCACCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGGTAGTAGCAGCTGTAGGTGCCCGGGGCGCCGGCGCCCAGCAGCGGGAAGTCGGCCCAGGGCTGCGCGGAGTCGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCACGAAGCTCATGTTCCGCAGGCGGCCCGCGCAGCGCAGGCTCACGTTGGCGCCAGGAGCCACCACCGGCCCGGGCAGAGCCACCAGCGACGGCCGCGGCAGCTCCTCTGC--AGAGACGGGGTGAGAGTCCCGGGCCGCGTGAGC---GTCTTTC---GCTCGCTCGCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102643700 345 - 106955855 TAGGGCCCTCA-CTTCCCAGCTGATGACCAGCACCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGATAGTAGCAGCTGTAGGTGCCCGGGGCGCGGGCGCCCAGCAGCGGGAAGTCGGCCCAGGGCTGCGCGGAGTCGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCACGAAGCTCATGTTCCGCAGGCGGCCCGCGCAGCGCAGGCTCAAGTTGGCGCCAGGAGCCACCACCGGCCCGGGCAGCGCCACCAGCGACGGCCGCGGCAGCTTCTCTGC--GGAGACGGGGTGAGGGTCCGGGGCCGCGTGAGC---GTCTTC-------CGctcgctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59928179 316 + 64156825 CAGGACCCTCACCTTCCCAGCTGATGACCAGCGCCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGGTAGTAGCAGCTGTAGGTGCCGGGAGCG----------------------------------GCGCGGAGTCGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCACGAAGCTCATGTTCCGCAGGCGGCCGGCGCAGCGCAGGCTTACGTTGGCGCCGGGAGCCACCACCGGCCCGGGCAGCGCCACCAGCGACGGCCGCGGCAGCTGCTCTGC--GGAGACCGGGTGAGAGTCGGGGGCCGCGTGAGC---GCCTTCC---GCTGGctcgctc i rheMac3.chr19 M 1236 I 2447 s papAnu2.chr19 47063776 350 + 51301725 CAGGACCCTCACCTTCCCAGCTGATGACCAGCGCCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGGTAGTAGCAGCTGTAGGTGCCGGGAGCGCGGGCGCCCAGCAGCGGGAAGTCAGCCCAGGGCTGCGCGGAGTCGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCACGAAGCTCATGTTCCGCAGGCGGCCGGCGCAGCGCAGGCTTACGTTGGCTCCGGGAGCCACCACCGGCCCGGGCAGCGCCACCAGCGACGGCCGCGGCAGCTGCTCTGC--GGAGACCGGGTGAGAGTCGGGGGCCGCGTGAGC---GCCTTCA---GCTcactcgctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46773562 350 + 50890351 CAGGGCCCTCACCTTCCCAGCTGATGACCAGCGCCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGGTAGTAGCAGCTGTAGGTGCCGGGAGCGCGGGCGCCCAGCAGCGGGAAGTCAGCCCAGGGCTGCGCGGAGTCGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCACGAAGCTCATGTTCCGCAGGCGGCCGGCGCAGCGCAGGCTTACGTTGGCGCCGGGAGCCACCACCGGCCCAGGCAGCGCCACCAGTGAGGGCCGCGGCAGCTGCTCTGC--GGAGACGGGGTGAGAGTGGGGGGCCGCGTGAGC---GCCTTCC---GCTCTCTCGCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45337330 344 + 49145316 CAGGG-CCTCACCTTCGGAGCGGACGGCCAGCACCGGGCTGCGCGGGGACAGCACGTAGGGCGCGGAGGGCGTGTGGTAGTAGCAGCTGTAGGTGCCGGGGGCGCGGACGCCCAGCAGCGGGAAGTCGGCCCAGGGCTGCGCGGAGTCGCGATACTGCAGCGGGGCCGCCACGCCCACGCGGTACAGCACGAAGCTCATGTTCCGCAGGCCGCCCGCGCAGCGCAGGGTCACACGGCCGCCGGGGGCCACCACCGACCCGGGCAGCGCCACCAGCGACGGGCGCGGCAGCTCCTCTGC--GGGCGGGAGGCGGGAGGC--GGACCGCGTGGGC---GCCTTTCCAGGAGCGC------ i calJac3.chr22 C 0 C 0 s mm10.chr7 3611065 339 + 145441459 ---------TACCTTCGAAACTGATGACCAGTGGCTGGCTGCGCTGTGATAGCACATAGGGGGCAGAAGGCGTGTGGTAATAGCAACAGTAGGTGCCAGGTGTGTGTGTGCCGATCAAAAGGAAGTCAGCCCAGGGCTGCACAGAGTCAATATACTGCAGAGGGGTTGCCACGCCTACGCGGTACAGTGCAAAACTCATGCCCGGTATGCGGCCTGCACAGCGCAGGCTTACGTTGGCTCCCGGGGCCACCACAGGCCCAGGCAGTGCCACCAGTGATGGTCTGGGGAGCTGATCTGT--GGAACACAGGCAAG-GTCTTAGATAGGCTATCT---GTCCTG----AATGGtcctctc i mm10.chr7 C 0 C 0 s canFam3.chr1 19572458 343 - 122678785 -CGGGCCCTTACCGTCAGCGCTGATGACCAGCGGCTCGCTGCGCAGCGACAGCACGTACGGGGAGGACGGCGTGTGGTAGTAGCAGCTGTAGGTGCCCGGCGCGCGGGCTCCGGGCAGCGGGAAGTCGGCCCAGGGCTCCGCCGAGTCGCGGTACTGCAGCGGCGCCGCCACCCCCACGCGGTACAGCGCGAAGCTCATGCCCCGCAGGCGGCCGGCGCAGCGCAGGCTCACGTTGGCATCGGGCGCCACCACCGGCCCGGGCAGCGCCACGAGCGACGGGCGCGGCAGCTGGTCTGCGAGGGGCACGGGCGGGGGCGAGCGCTGGCGCGGGCCTGGCccccc---g----------- i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I a score=57000.000000 s hg38.chr19_GL949747v2_alt 70587 104 + 729520 gctctgtttctccttct-cctctgtctctcgc------------------------------------------------------------tttctctgtgcc-tctctctctctttctgc----ctctctt---------------tctctctgcctg--tctctctctctgtctgcctctctct s panTro4.chr19 59004275 104 + 63644993 gctctgtttctctttct-cctctgtctctcgc------------------------------------------------------------tttctctgtgcc-tctctctctctttctgc----ctctctt---------------tctctctgcctg--tctctctctctgtctgcctgtctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55881345 111 + 60714840 Gctctctttctctttctgcctctgtctctcgc------------------------------------------------------------tttctctctgcc-tctctctctctctctgcctctctctctt---------------tctctctgcctgcctctctctctctctctgcctctctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644045 97 - 106955855 gctgtctt----------tctctgtctctcgc------------------------------------------------------------tttctctctgcc-tctctctctctttctgt--ctctctctc---------------tctgtctgcctg--tctctctctctgtctgcctgtctct i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47064126 161 + 51301725 ------tctctctttctgcctctgtctctctctctctctgtctttctcttcctctctgcctgtctctctctttctctctgcctgtctctctctttctttctgcc-tctctctttctttctgc--ctgtctctt---------------tctctctgcctg--tctctctttctctctgcctgtctct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46773912 71 + 50890351 ----TCTTTCTCTTTCTGCCTCTGTCTCTCTC-----------------------------------------------------------------------------------------------TCTCTT---------------TCTCTCTGCCTG--TCTCTCTCTCTCTCTGCCTGTCTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45337674 95 + 49145316 ------------Gctctgcctgtgtctctctt-----------------------------------------------------------ctctctttcctctgtctctctctcgttctgcctctgtctctt---------------tctcgctccc----tctgtctctgtctctgtctctct-- i calJac3.chr22 C 0 C 0 s mm10.chr7 3611404 101 + 145441459 ------------------cctcctcctccctt------------------------------------------------------------ctcttctgcctc-ccttcccatcccccaaactctctcccctcAGTAAGTTCAGGAATTTCTCAGTGTA--CCTCCCTATC-----GCCTCTCTCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19572801 46 - 122678785 ----------------------------------------------------------------------------------------------gccctgcgcc-cctc-----------------ctcccgc---------------tccccgaccctg--tgcccc-------cggcctg----- i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=2692.000000 s hg38.chr19_GL949747v2_alt 70691 2 + 729520 ct s ponAbe2.chr19 55881456 2 + 60714840 ct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644142 2 - 106955855 tt i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47064287 2 + 51301725 ct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46773983 2 + 50890351 CT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45337769 2 + 49145316 ct i calJac3.chr22 C 0 C 0 s mm10.chr7 3611505 2 + 145441459 TT i mm10.chr7 C 0 I 1 e canFam3.chr1 19572847 0 - 122678785 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I e panTro4.chr19 59004379 0 + 63644993 C a score=4280.000000 s hg38.chr19_GL949747v2_alt 70693 19 + 729520 gcctccctctctctctgcc s ponAbe2.chr19 55881458 19 + 60714840 ttctctctgcctgcctctc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47064289 17 + 51301725 --ctttctctctgcctgtc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46773985 15 + 50890351 --C--TCTCTCTGCCTGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45337771 19 + 49145316 ttctcttttttttttagcc i calJac3.chr22 C 0 I 893 s mm10.chr7 3611508 15 + 145441459 TGTTCCTTTTCTACC---- i mm10.chr7 I 1 I 1 s canFam3.chr1 19572847 19 - 122678785 gcccccttctcccgctgcc i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I e panTro4.chr19 59004379 0 + 63644993 C a score=4446.000000 s hg38.chr19_GL949747v2_alt 70712 15 + 729520 ----tccctctct--ctgcct s ponAbe2.chr19 55881477 15 + 60714840 ----tctctctct--ctgcct i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47064306 17 + 51301725 ----tctctctctgcctgtct i papAnu2.chr19 C 0 I 2765 s chlSab2.chr6 46774000 15 + 50890351 ----TCTCTCTCT--CTGCCT i chlSab2.chr6 C 0 C 0 s mm10.chr7 3611524 14 + 145441459 ----TCTCCTACC--CTCCT- i mm10.chr7 I 1 C 0 s canFam3.chr1 19572866 15 - 122678785 tccgcctcctgct--ct---- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I e panTro4.chr19 59004379 0 + 63644993 C a score=10439.000000 s hg38.chr19_GL949747v2_alt 70727 35 + 729520 ccctc----tctctctgcc----tccctctctctctgcctccc s ponAbe2.chr19 55881492 41 + 60714840 ctctctctttctctctgcctg--tctctctctctctgcctctc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47067088 39 + 51301725 ctctt----tctctctgcctgtctctctctctctctgcctgtc i papAnu2.chr19 I 2765 C 0 s chlSab2.chr6 46774015 35 + 50890351 GTCTC----TCTCTCTGCCTG----TCTCTCTCTCTGCCTGTC i chlSab2.chr6 C 0 C 0 s mm10.chr7 3611538 36 + 145441459 ------TCACCTCACT-CCTGTGCCCTTCTCCCATTTCTTCCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19572881 35 - 122678785 cgttc----cctctccgcc----gctcaccgacgcccctgccc i canFam3.chr1 C 0 C 0 e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I e panTro4.chr19 59004379 0 + 63644993 C a score=33036.000000 s hg38.chr19_GL949747v2_alt 70762 117 + 729520 tc----tctctctgc--------ctccctctctctctgcctccctc----tctctctgcctgcctctctctttgcctgcctctctctctgcctccctct-------------ctctgcctccctctctctctgcctccctctctct s ponAbe2.chr19 55881533 129 + 60714840 tctctttctctctgcctgcct--ctctctctctctctgcctctctctctttctctctgcctgtctctctctct--ctgcctctctctctttctctctgc-------------ctgcctctctctctctctctgcctctctctcttt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47067127 129 + 51301725 tctc--tctttctctctgcct--gtctctctctttctgcctgtctctctttctctctgcctgtctctctctctctctgcttgtctctctctctctctct-------------gcctgtctctctctctctctgcctgtctctctct i papAnu2.chr19 C 0 I 892 s chlSab2.chr6 46774050 89 + 50890351 ------------------------TCTCTCTCTCTCTGCCTGTCTCTCTTTCTCTCTGCCTGTCTCTCTCTCTCTCTGCCTGTCTCTCTCTTTCTCTCT-------------GCCTGTCTCTCTCT-------------------- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19572916 126 - 122678785 ----------------TGCCTCACTCTGCATTTCTCTCCCTCCCTCCCAACATCTCTG--TGTCTCTCGTTATTTCTGCTTTTGTGTCCTTTGCATCCTAGTCGGTGGCGCCCCCTGTATCTTCATCCCCGAGCACACCTTTCT-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I e panTro4.chr19 59004379 0 + 63644993 C a score=684.000000 s hg38.chr19_GL949747v2_alt 70879 8 + 729520 ctgcctcc s ponAbe2.chr19 55881662 8 + 60714840 ctctctgc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47068148 8 + 51301725 ctgtctct i papAnu2.chr19 I 892 C 0 s canFam3.chr1 19573042 8 - 122678785 CTTGCAGT i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e chlSab2.chr6 46774139 0 + 50890351 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I e panTro4.chr19 59004379 0 + 63644993 C a score=6253.000000 s hg38.chr19_GL949747v2_alt 70887 10 + 729520 ctctctctct s panTro4.chr19 59004379 10 + 63644993 ctttctctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55881670 10 + 60714840 ctgtctctct i ponAbe2.chr19 C 0 I 226 s papAnu2.chr19 47068156 10 + 51301725 ctctttctct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46774139 2 + 50890351 --------CT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19573050 10 - 122678785 CTCTGCCTCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=1205.000000 s hg38.chr19_GL949747v2_alt 70897 2 + 729520 gc s panTro4.chr19 59004389 2 + 63644993 gt i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47068166 2 + 51301725 gc i papAnu2.chr19 C 0 I 22 s chlSab2.chr6 46774141 2 + 50890351 GC i chlSab2.chr6 C 0 I 4 s canFam3.chr1 19573060 2 - 122678785 GT i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e ponAbe2.chr19 55881680 226 + 60714840 I e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=34435.000000 s hg38.chr19_GL949747v2_alt 70899 58 + 729520 ctccctctctctctgcctccctc------tctctctgcctgcctctctctctgcctgcctctct s panTro4.chr19 59004391 58 + 63644993 ctgcctctctctctgcctccctc------tctctctgcctccctctctctctgcctccctctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55881906 62 + 60714840 ctctctctctctctgcctctctc--tctttctctctgcctgtctctctctctgtctgcctgtct i ponAbe2.chr19 I 226 C 0 s papAnu2.chr19 47068190 56 + 51301725 ctctctctctctctgcctgtctctctctttctctctgcctgtctctctct--------tactct i papAnu2.chr19 I 22 C 0 s chlSab2.chr6 46774147 56 + 50890351 CTCTCTTTCTCTCTGCCTGTCTCTCTCTTTCTCTCTGCCTGTCTCTCTCT--------TCCTCT i chlSab2.chr6 I 4 C 0 s canFam3.chr1 19573062 50 - 122678785 --------GTCCCCGGATGTCCC--CTTGTCTGTCTGCCTGTGGTTCACTGAAA----TTCTCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=36988.000000 s hg38.chr19_GL949747v2_alt 70957 42 + 729520 ctctgcctcc-------ctctctttctgcctccctctctctctgcctcc s panTro4.chr19 59004449 42 + 63644993 ctctgcctcc-------ctctctctctgcctccctctctctctgcctcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55881968 36 + 60714840 ctct-------------ttctctctctgcctccctttctctctgcctcc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47068246 42 + 51301725 ctctgcctct-------gtctctttctctttgtctctctctctgcctcg i papAnu2.chr19 C 0 I 6 s chlSab2.chr6 46774203 42 + 50890351 CTCTGCCTCT-------GTCTCTTTCTCTTTGTCTCTCTCTCTGCCTCG i chlSab2.chr6 C 0 I 6 s calJac3.chr22 45338683 49 + 49145316 ctcagcctcccgagtagctTtctctctctctctctttctctctgcttct i calJac3.chr22 I 893 C 0 s canFam3.chr1 19573112 42 - 122678785 TTGTACGTCC-------CTGTTTTAATCTCCCCCGCGCTGTGTGTTTCA i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=50583.000000 s hg38.chr19_GL949747v2_alt 70999 45 + 729520 -----ctctctctc--------tgcctccc------tttctccttctgcctctttctc--tctctc s panTro4.chr19 59004491 45 + 63644993 -----ctctctctc--------tgcctccc------tttctccttctgcctctttctc--tctctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882004 45 + 60714840 -----ctttctctc--------tgcct--c------tttcttcttctgcctctttctctGTCTCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644144 41 - 106955855 -----ctctctctc--------tgcctccc------tttctccttctgcctctt------tctctc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47068294 45 + 51301725 -----ctttctgtc--------tgcctctc------tttctccttctgcctctgtctc--tttctc i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 46774251 45 + 50890351 -----CTTTCTCTC--------TGCCTCTC------TTTCTCCTTCTGCCTCTGTCTC--TTTCTC i chlSab2.chr6 I 6 C 0 s calJac3.chr22 45338732 33 + 49145316 -----ctctctttc--------c-cccctc------tctctccc-----------ctc--catctc i calJac3.chr22 C 0 C 0 s canFam3.chr1 19573154 64 - 122678785 CTACCCTGGATCTCCGAGGCAGTGTCTGCCGTATGGTTTCTTCTGGTGCTTCTGGGTT--TCTCCc i canFam3.chr1 C 0 I 198 e mm10.chr7 3611574 0 + 145441459 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=41042.000000 s hg38.chr19_GL949747v2_alt 71044 30 + 729520 tccccccgcactgtacctctctc----tctctct s panTro4.chr19 59004536 30 + 63644993 tccccccgcactgtacctctctc----tctctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882049 34 + 60714840 TCCCCCCGCACTGTACctctctctctttctctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644185 34 - 106955855 tccccccgcactgtacctctctctctttctctct i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47068339 30 + 51301725 tctcccctcactctacctctctc----tctcttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46774296 30 + 50890351 TCTCCCCTCACTCTACCTCTCTC----TCTCTTT i chlSab2.chr6 C 0 I 17 s calJac3.chr22 45338765 29 + 49145316 cccccccac-ccgtccctccctc----cctctct i calJac3.chr22 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e canFam3.chr1 19573218 198 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=2552.000000 s hg38.chr19_GL949747v2_alt 71074 37 + 729520 gctcccctgtctctctctctctgctcccctgtctctc---- s panTro4.chr19 59004566 21 + 63644993 gctcccctgtctctctctctc-------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882083 21 + 60714840 gctcccctgtctctctctctc-------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644219 15 - 106955855 gctccc------gtctcgctc-------------------- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47068369 15 + 51301725 ------ctgtctgccccaccc-------------------- i papAnu2.chr19 C 0 I 2 s calJac3.chr22 45338794 25 + 49145316 gtccccgcgactccccccgcc----------------ccac i calJac3.chr22 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e canFam3.chr1 19573218 198 - 122678785 I e chlSab2.chr6 46774326 17 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=619.000000 s hg38.chr19_GL949747v2_alt 71111 7 + 729520 tctctcc s panTro4.chr19 59004587 1 + 63644993 ------c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882104 1 + 60714840 ------c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644234 1 - 106955855 ------c i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47068386 6 + 51301725 tctct-c i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 46774343 6 + 50890351 TCTCT-C i chlSab2.chr6 I 17 C 0 e mm10.chr7 3611574 0 + 145441459 C e canFam3.chr1 19573218 198 - 122678785 I e calJac3.chr22 45338819 0 + 49145316 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=20660.000000 s hg38.chr19_GL949747v2_alt 71118 24 + 729520 ccctagtg--------------tctctgtatctgtctt s panTro4.chr19 59004588 24 + 63644993 ccctAGtg--------------tctctgtatctgtctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882105 24 + 60714840 ccctAGTG--------------TCTCTGTATCTGTCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644235 21 - 106955855 ccctagta--------------tctctgtatct---ct i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47068392 24 + 51301725 ccccagta--------------tctctgtgtctttctt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46774349 24 + 50890351 CCCCAGTA--------------TCTCTGTGTCTTTCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45338819 11 + 49145316 ------------------------actgtatcttt--- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19573416 37 - 122678785 ccctagtaaagaatcaTCCATTTCTCTGGTTCTCTTT- i canFam3.chr1 I 198 C 0 e mm10.chr7 3611574 0 + 145441459 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=235227.000000 s hg38.chr19_GL949747v2_alt 71142 110 + 729520 ttcttgtgt-----------ctgtgaatct----gtttgcccgcctcgctctgtctctct-----ttccctatatctctctgtccctcC-CCCAACTCCCTTGTTCCACC-----------CACTTCTCCTC----CCCGACCCCA s panTro4.chr19 59004612 112 + 63644993 ttcttgtgt-----------ctgtgaatctatcagtttgcccgcctcgctctgtctct-------ttccctatatctctctgtccctCC-CCCAACTCCCTTGTTCCACC-----------CACTTCTCCTC----CCCGACCCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882129 98 + 60714840 TTCTTGTGT-----------CTGTGAATCTATCAGTTTGCCCGCCTCGCTCTGTCTCT---------------------CTGTCCCTCC-CCCACCTCCCTTGTTCCACC-----------CACTTCTCCTC----CCCGACCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644256 114 - 106955855 gtcttgtgc-----------ctgcgaatctatcagtttgccagcctcgctctgtctctct-----ttccctatatctctctgtccctcC-CCCACCTCCCTTGTTCCACC-----------CACTTCTCCTC----CCCGACCCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59930942 110 + 64156825 TTCTTGTGT-----------CTGTGAATCTGTCAGTTTGCCTGCCTCGCTCTCTCTTT---------ACCTGTATCTCTCTGTCCCTCC-CCCACCTCCCTTGTTCCACC-----------CGCTTCTCCTC----CCTGACCCCA i rheMac3.chr19 I 2447 C 0 s papAnu2.chr19 47068416 108 + 51301725 --cttgtgt-----------ctgtgaatcTGTCAGTTTGCCCGCCTCGCTCTCTCTTT---------ACCTGTatctctctgtccctcc-cccacctcccttgTTCCACC-----------CGCTTCTCCTC----CCTGACCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46774373 108 + 50890351 --CTTGTGT-----------CTGTGAATCTATCAGTTTGCCTGCCTTGCTCTCTCTTT---------CCCTGTATCTCTCTGTCCCTCC-CCCACCTCCCTTGTTCCACC-----------TGCTTCTCCTC----CCTGACCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45338830 114 + 49145316 ctctcGTGT-----------CTGTGAAACTATCAGTTTGCTCGCGTCACTCTGTCTCTCT-----TTCCCTGTATCTCTCTGTCCTTCC-CCCGCCTCCCTTGCTCCACC-----------CGCTTCTCCTG----CACAACCCCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19573453 146 - 122678785 CCCTCATGTAGTAATTTTTGCTCTGGGTCATTGTACAAGCCTGTCTCTGTATGTCTTTTTCCGTATCTCCTGTATCTCTCAGTCCCTCCTTCTCCCTCCCTCATCACACCCCAAAGTCCCTCCTTTCCCCTCAGCGCCCCACCTCA i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e macFas5.chr19 54942282 1 + 59248254 I a score=1606428.000000 s hg38.chr19_GL949747v2_alt 71252 481 + 729520 GGACCTCACCTGTCACCAGCAGCTCCAGGACATCGCTGGGCTGGGACCAGACACCCGGCCCCCAGTCTGGCCTTCGGTAGCAGCAGCGGTAAATTCCCCCTTGGGCTGGAGTCACCTCCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATCCCGGAAGAGAAGGGGAGCGATCTCTCCAGGCTTGAAAAGTCCAAATCTCCAAGCGGGTTGGGGTGCCCGGCATCTCAAGGTCACGTTGACCCCAGGGGTCACAACTGTAGCCGGCTGAGCTCCCAGCCATGGCTTAGGGTGGTATGAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTCCTCGGGCCT------CCTGGGAGCCCCAGAAGATGAAAGGGAAGTTGGGGAAGGAGGAAAATCaccttggacaattactgcccctttcttagcctcagtttcctgtttgt-aaaatcagggagagactggactaCAATCAAGCCTTGTTAA s panTro4.chr19 59004724 481 + 63644993 GGACCTCACCTGTCACCAGCAGCTCTAGGGCATCGCTGGGCTGGGACCAGACACCCGGCCCCCAGTCTGGCCTTCGGTAGCAGCAGCGGTAACTTCCCCCTTGGGCTGGAGTCACCTCCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATCCCGGAAGAGAAGGGGAGCGATCTCTCCAGGCTTGAAAAGTCCAAATCTCCAAGCGGGTTGGGGTGCCCGGCATCTCAAGGTCACGTTGACCCCAGGGGTCACAACTGTAGCCGGCTGAGCTCCTAGCCATGGCTTAGGGTGGTATGAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTTCTCGGGCCT------CCTGGGAGCCCCAGAAGATGAAAGGGAAGTTGGGGAAGGAGGAAAATCaccttggacaactactgcccctttcttagcctcagtttcctgtttgt-aaaatcagggagagactggactaCAATCAAGGCTTGTTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882227 481 + 60714840 GGACCTCACCTGTCACCAGCAGCTCCAGGGCATCGCTGGGCTGGGACCAGACACCCGGCCCCCAGTCTGGCCTTTGGTAGAAGCAGCGGTAACTTCCCCCTTGGGCTGGAGTCACCACCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATTCCGGAAGAGAAGGGGAGCCATCTCTCCAGGCTTGAAAAGTCCAAATCTCCAAGCGGGTTGGGGTGCCCGGCACCTCAAGGTCACGTTGACCCCAGGGGTCACAACTGTAGCTGGCTGAGCTCCCAGCCATGGCTTAGGGTGGTATGAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTCCTCGGGCCT------CCTGGGAGCCCCAGAAGATGAAAGGGAAGTTGGGGAAGGAGGAAAATCaccttggacgattactgcccctttcttagcctcagtttcctgtttgt-aaaatcagggagagactggactaCAATCAAGGCTTGTTAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644370 481 - 106955855 GGACCTCACCTGTCACCAGCAGCTCCAGGGCATCGCTGGGCTGGGACCAGACACCCGGCCCCCAGTCTGGCCTTCGGTAGCAGCAGCGGTAACTTCCCCCTTGGGCTGGAGTCACCTCCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATCCCGGAAGAGAAGGGGAGCGATCTCTCCAGGCTTGAAAAGTCCAAATCTCCAAGCAGGTTGGGGTGCCCGGCACCTCAAGGTCACGTTGACCCCAGGGGTCACAACTGTAGCCGGCTGAGCTCCCAGCCATGGCTTAGGGTAGTATGAAGCTGGGGGGACTGAATAAACAGGGCTGCCTGGGTCCTCGGGCCT------CCTGGGAGCCCCAGAAGATGAAAGGGAAGTTGGGGAAGGAGGAGAATCaccttggacgattactgccccttacttagcctcagtttcgtgtttgt-aaaatcggggagagactggactaCAATCAAGGCTTGTTAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59931052 478 + 64156825 GGACCTCACCTGTCACCAGCAGCTCCAGGGGATCGCTGGGCTGGGACCAGACACCCGGCCTCCAGTCTGGCCTCCGGTAGCAGCAGTGGTAACTTCCCCCTTGGGCTGGAGTCACCTCCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATCCCGGAAGAGAGGGGGACCAATCTCTCCAAGCTTGAAAAGTCCAAATCTCCAGGCGGGTTGGGGTGCCCGGCACCTCAAGGTCACATTGACCCCAGGGGTCACAACTGTAGCCGGCTGAGCTCCCAGCCATGGCTTGGG---GTATAAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTCCTCGGGCCT------CCTGGGAGCCCCAGAAGATGACAGGGAAGTTGGGGAAGGAGGAAAATCaccttgaacgattactgcctctttctcagtctcagtttcctgtttgt-aaaatcagggagagactggactaCAATCACGGCTTGTTAA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47068524 478 + 51301725 GGACCTCACCTGTCACCAGCAGCTCCAGGGGATCGCTAGGCTGGGACCAGACACCCGGCCTCCAGTCTGGCCTCCGGTAGCAGCAGTGGTAACTTCCCCCTTGGGCTGGAGTCACCTCCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATCCCGGAAGAGAGGGGGACCAATCTCTCCAAGCTTGAAAAGTCCAAATCTCCAGGCGGGTTGGGGTGCCTGGCACCTCAAGGTCACATTGACCCCAGGGGTCACAACTGTAGCCGGCTGAGCTCCCAGCCATGGCTTGGG---GTATAAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTCCTCGGGCCT------CCTGGGAGCCCCAGAAGATGACAGGGAAGTTGGGGAAGGAGGAAAATCACCTTGAACGATTACTGCCTCTTTCTCAGTCTCAGTTTCCTGTTTGT-AAAATCAGGGAGAGACTGGACTACAATCACGGTTTGTTAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46774481 479 + 50890351 GGACCTCACCTGTCACCAGCAGCTCCAGGGGATCGCTGGGCTGGGACCAGACACCCGGCCTCCAGTCTGGCCTCCGGTAGCAGCAGTGGTAACTTCCCCCTTGGGCTGGAGTCACCTCCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATCCCGGAAGAGAGGGGGACCGATCTCTCCAAGCTTGAAAAGTCCAAATCTCCAGGCGGGTTGGGGTGCCCGGCACCTCAAGGTCACATTGACCCCAGGGGTCACAACTGTAGCCGGCTGAGCTCCCAGCCATGGCTTGGG---GTATAAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTCCTCGGGCCT------CCTGGGAGCCCCAGAAGATGACAGGGAAGTTGGGGAAGGAGGAAAATCaccttgaacgattactgcctctttctcagtctcagtttcctgtttgtaaaaatcagggagagactggactaCAATCACGGCTTGTTAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45338944 478 + 49145316 GGACCTCACCTGTCACCAGCAGCTCCAGGGCATCGCTGGGCTGGGACCAGACACCCGGCCCCCAGTCTGGCTTCCCATAGCAGCAGTGGTAACTTCCCCCTTGGGCTGGAGTCACCTCCTCCAGGAAGAACTCCGCCAGCTCCGAGGACACGTCTCGGAGGAGAAGGGGATCGGTCTCTCCAGACTTGAAAAGTGCAAATCTCCAGGCGGGTTGGGGTGCCCGGCACCTCAAGGTCACATTGACCCCGGGGGTCACAACCGAAGCTGGCCGAGCTCCCAGCCATGGCCTGGG---GTATGAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTCCTCGGACCT------CCTGGGAGCCCCAGAAGATGGAAGGGAAGTTGGGGAAAGAGGAAAATCaccctggacggttactacccctttctcagcctcagttccctgttggt-gaaatcagggggagactggacaacagtcaaggCTTGTTAA i calJac3.chr22 C 0 I 569 s mm10.chr7 3611574 443 + 145441459 AGACCTCACCCGTTACCAGCAGTTCCAGAACATTACTGGGCTGAGACCAGACACCTGGCCCCCAGTCTGTCTTGCGGTAGCGGCAGTGATAACTGCCCCCTTGGGCCGGAGTCACTTCTTCCAGGAAGAACTCAGCCAGCTCAACGGACACATCCCGGAGGAGCAGAGGGGTGACAAGGCCACTTTTGAAGAGTGCAAACCGCCAGGCAGATTGAGGTGCGCGGCAAGTCAAGGTCACGTTGATCCCAGGAGTCACAACTGCAGCAGGATGAGCTCCCAGCCATGGCTGGGG---GTATGAGGCTAGGGGCGCTTAATAAAAAAGACTGCTTGGGTCCTTAGGACCCTCCAACCCAGAAGGCCCAGGAGCTTAAGCAGAAGTCGGA-------------CACCATGAA---------CCTCTCTCT-------------------AT-AAAGAAGGGGAGGGCCTGGAATACAATCACAGCCGGCCTA i mm10.chr7 C 0 C 0 s canFam3.chr1 19573599 457 - 122678785 GGACCTCACCTGTCACCAGCAGTTCCAGTGTATCACTGGGGTGGGACCAGATACCCAGGTCCCAGCCAAGACTCCGGTAGCAGCAGTGGTAACTGCCCCCCTGGGCTGGGGTCACCTCCTCCAGGAAGAACTCTGCCAGCTCCATGGACACATCCCGGTACAGCACAGGAGTGATTTCTCCAGACTTGAAGAGTGCAAACCTCCAGGCAAGTTGAGGTGCCTGGCACCTCAAGGTCACGTTGACCCCAGGGGTTACAATTGCAGCAGGCTGAGCCTCCAGCCATGGCTTGGG---GTATAAGGCTGGGGAGACTGAATAAACAGAATT-CCTGGGTCCCTGGGCTT------CCTGG--------------------GCAGGTGGGGTGGGAAGAGAATCacctggggcagtccctgcctctttctcatcctcagttccctgcttat-aaaatagggaaggtgctggacCCCAGTCAAGGATTGTCAA i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I a score=159370.000000 s hg38.chr19_GL949747v2_alt 71733 56 + 729520 AACCAGGTGCAAATCAGAGGGGCAGGACAGAAACTTCTGAGCTTT----ACTCCACAGTT s panTro4.chr19 59005205 56 + 63644993 AACCAGGTGCAAATCAGAGGGGCAGGACAGAAACTTCTGAGCTTT----ACTCCACAGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882708 56 + 60714840 AACCAGGTGCAAATCAGAGGGGCAGGACAGAAACTTCTGAGCTTT----ACTCCACAGTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644851 56 - 106955855 AACCAGGTGCAAATCAGTGGGGCAGGAGAGAAACTTCTGAGCTTT----ACTCCACAGTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59931530 56 + 64156825 AACCAGGTGCAAATCAGAGGGGCAGGACAGAAACTTCTGAGCTTT----ACTCCACAGTT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47069002 56 + 51301725 AACCAGGTGCAAATCAGAGGGGCAGGACAGAAACTTCTGAGCTTT----ACTCCACAGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46774960 56 + 50890351 AACCAGGTGCAAATCAGAGGGGCAGGACAGAAACTTCTGAGCTTT----ACTCCACAGTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45339991 54 + 49145316 aaCCAGGTGCACATC--TGGGGCAGGACAGAAACTTCACAGCTTC----ACTCCACAGTT i calJac3.chr22 I 569 C 0 s mm10.chr7 3612017 56 + 145441459 AACAAGCTGACAATCACTGGAATAGTACTCTTAACTTTGAGCTTT----TCCCCATAGTT i mm10.chr7 C 0 I 3275 s canFam3.chr1 19574056 57 - 122678785 GACTAGCCGCAAATTAGAATAGCAGG---GTCACTCCTGAGCTTTATTGACTCCGTGTTT i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I a score=111562.000000 s hg38.chr19_GL949747v2_alt 71789 65 + 729520 TGTAAACACAGTTTCAAAAGGTCAGGTCCCAGAACTCTGTAA-TT-----TTATTATTattattattttta s panTro4.chr19 59005261 65 + 63644993 TGTAAACACAGTTTCAAAAGGTCAGGTCCCAGAACTCTGTAA-TT-----TTATTATTattattattttta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882764 65 + 60714840 TGTAAACATAGTTTCAAAAGGTCAGGTCCCAGAACTCTGTAA-tt-----ttattattattattattttta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644907 65 - 106955855 TGTAAACATAGTTTCAAAAGGTCAGGTCCCAGAACTCTGTAA-TT-----TTATTAttattattattttta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59931586 59 + 64156825 TGTAAACACAGT-------AGTCAGGTCCCAGAACTCTGTAATTT-----TTTTtttttttttttttttta i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47069058 56 + 51301725 TGTAAACACAGT-------AGTCAGGTCCCAGaactctgtaa--------tttttttttttttttttttta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46775016 55 + 50890351 TGTAAACACAGT-------AGTCAGGTCCCAGAACTCTGTAA---------TTTTAttttattttttttta i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45340045 57 + 49145316 TGTAAACATAGTTTCAAAGTGTCAGGTCTCAGAAGTCTGTCA-TT-----TTATTCCTATTA--------A i calJac3.chr22 C 0 C 0 s canFam3.chr1 19574113 70 - 122678785 TTTAAACATAATGTCAAGGGATTGGGTCCCTGAAATCTGCAA-TTTTAAATTGTTCTTCAGACTATTTGTA i canFam3.chr1 C 0 I 1653 e mm10.chr7 3612073 3275 + 145441459 I e macFas5.chr19 54942282 1 + 59248254 I a score=119402.000000 s hg38.chr19_GL949747v2_alt 71854 65 + 729520 agtaatgagatgggagggggcggtctccctat----gttgagcaggttggtcttaaactactggcctca s panTro4.chr19 59005326 61 + 63644993 agtaatgagatgggggggg----tctccctat----gttgagcaggttggtcttaaactactggcctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882829 61 + 60714840 agtaatgagatgggggggg----tctccctat----gttgaccaggttggtcttgaactactggcctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644972 61 - 106955855 agtaatgagatgggggggg----tctccctat----gttgactaggttggtcttgaactactggcctca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59931645 60 + 64156825 agtaatgagatggggatg-----tctccctat----gttgcccaggctggtcttaaactgccagcctca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47069114 60 + 51301725 agtaatgagATGGgggtg-----tctccctat----gttgcccaggctggtcttaaactaccagcctca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46775071 60 + 50890351 agtaatcagatgggggtg-----tctccctat----gtcggccaggctggtcttaaactaccagcctca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45340102 63 + 49145316 AGTAATGAGATGGgggg------cctatctatattggttggccaggttggtcttcaactactggcctca i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=192351.000000 s hg38.chr19_GL949747v2_alt 71919 251 + 729520 agcaatcctcccacctcggcctcccaaagtgctaagtttacaagcttgtgccaccacacccagA-------------Ctttttttttttt---------tttttttttttttgaggcagggtcttgctgtgttgctc-aggcaggagtgcagtggcatgttctcaactcactgcagcctcaatctcttgggctcaaacagtcctccacctcagcctcctgagtacctgggaccacaggcacatgccactacaccaggctaatttttttttt---tta s panTro4.chr19 59005387 254 + 63644993 agcaatcctcccacctcggcctcccaaagtgctaagtttacaagcttgtgccaccacgcccagA-------------Ctttttttttttt---------tttttttttttttgaggcagggtcttgctctgttgctc-aggcaggagtgcagtggcatgttctcaactcactgcagcctcaatctcctgggctcaaacactcctccacctcagcctcctgagtacctgggaccacaggcacatgccgctacaccaggctaattttttttttattttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882890 265 + 60714840 agcaatcctcccacctcggcctcccaaagtgctaagtttacaagcttgtgccaccacgcccagACttttttttctttctttttttttttt---------tttttttttttttgaggcagggtcttgctctgttgctcaaggcaggagtgcagtggcatgttctcaactcactgcagcctcaatctcctgggctcaaacaatcctccacctcagcctcctgagtacctgggaccacaggcacatgccactacaccaggctaatttttttttt---tta i ponAbe2.chr19 C 0 I 324 s nomLeu3.chr10 102645033 245 - 106955855 agcaatcctcccagctcggcctcccaaagtgctaagtttacaagcttgtgccaccacgcccagA------------------Cttttctt---------tttttttttttttgaggcagggtcttgctctg-tgctc-aggcaggagtgcagtggcatgttctcaactcactgcagcctcaatctcctgggctcaaatgatcctccacctcagcctcctgagtacctgggaccacaggcacatgtcactacaccaggctaattttttttat---ttt i nomLeu3.chr10 C 0 I 333 s calJac3.chr22 45340165 260 + 49145316 agcagtcctcccaccttggcttctcagagtgctaagattacaacctggtgccgctgcgcccggA-------------CTATTGtttttttaatttattattattatttttttgagacagggtgttgctctgttgctc-aggcaggagtgcagtggtgtgttctcagctcactgcagcctcaacctcctgagttcaaacaatcctctgcctcagcctcctgagttcctgggaccacaggcgcacggtgctacaccaggctgttttttttgtt---act i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46775131 0 + 50890351 C e papAnu2.chr19 47069174 0 + 51301725 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59931705 0 + 64156825 C a score=46982.000000 s hg38.chr19_GL949747v2_alt 72170 61 + 729520 atttttagtagagacgagcattcgctatattgcccaggctactcttgaactcttgggctcg s panTro4.chr19 59005641 61 + 63644993 atttttagtagagacgagcattcgctatattgcccaggctactcttgaactcttgggctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55883479 61 + 60714840 atttttagtagagacgagcattcactatgttgcccaggctactgtcaaactcttgggctca i ponAbe2.chr19 I 324 C 0 s nomLeu3.chr10 102645611 61 - 106955855 atttttagtagagatgagcattcgctatgttgcccaggctactctcgaactcttgggctca i nomLeu3.chr10 I 333 C 0 s calJac3.chr22 45340425 61 + 49145316 atcagtagtagggacaagcatttgctatgttgcccggactagtctcgaacccctgggctca i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46775131 0 + 50890351 C e papAnu2.chr19 47069174 0 + 51301725 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59931705 0 + 64156825 C a score=291544.000000 s hg38.chr19_GL949747v2_alt 72231 120 + 729520 agcaatcctcccacctcggcctcccaaagtgctgggattacaggtgtgagccaccacgcccagccAGAACTCTAATTTTAAATAGCTTTCCAGAATATTTGCAATATAGTATTTCAAGAG s panTro4.chr19 59005702 120 + 63644993 agcaatcctcccacctcggcctcccaaagtgctgggattacaggtgtgagccaccacgcccagccAGAACTCTAATTTTAAATAGCTTTCCAGAATATTTGCAATATAGTATTTCAAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55883540 120 + 60714840 agcaatcctcccaccttggcctcccaaagtgctgggattacaggtgtgagccaccacgcccagccAGAACTCTAATTTTAAATAGCTTTCCAGAATGTTTGCAATATAGTATTTCAAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102645672 120 - 106955855 agcagtcctccccccttggcctcccaaagtgctaggattacaggtgtgagtcaccacgcccagccAGAACTCTAATTTTAAATAGCTTTCCAGAATATTTGCAATATAGTATTTCAAGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59931705 120 + 64156825 agcaatcctctcaccttggcctcccaaagttctgggattacgggtgtgagccaccacacccagccAGAACTCTAATTTTAAATAATTTTCCAGAATATTTGCAATATAGTATTTCAAGAG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47069174 120 + 51301725 agcaatcctcccaccttggcctcccaaagttctgggattatgggtgtgagccaccacacccagccaaaactctaattttaaataactttccaGAATATTTGCAATATAGTATTTCAAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46775131 120 + 50890351 agcaatcctcccaccttggcctcccaaagttctgggattacaggtgtgagccaccacacccagccAGAACTCTAATTTTAAATAACTTTCCAGAATATTTGCAATATAGTATTTCAAGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45340486 120 + 49145316 agcgatcctcccaccttggcctcccaaagtgctgagcttacagatgtgagccaccacacccagccAGAACTCCAATTTTAAATAGCTTTCCAGAATATATGCTATATAATATTTCAAGAG i calJac3.chr22 C 0 I 300 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=467744.000000 s hg38.chr19_GL949747v2_alt 72351 212 + 729520 TTGCCAAAACTTG----ctatttggaa--aagaaaaa--tgttggatccctacctcataccatttcccaaaacaacttccagattaattaaagac---cctgtgtttctttttttttaaactataaaagtattcaaaaaactataggaaaatatatttgtcttggggtaaggaaggcttcttaaaatataaaataaaaagttgtatggaagattaattaattt s panTro4.chr19 59005822 213 + 63644993 TTGCCAAAACTTG----ctatttggaa--aaaaaaaa-atgttggatccctacctcacaccatttcccaaaacaacttccagattaattaaagac---cctgtgtttcattttttttaaactataaaagtattcaaaaaactataggaaaatatatttgtcttggggtaaggaaggcttcttaaaatataaaataaaaagttctatggaagattaattaattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55883660 213 + 60714840 TTGCCAAAACTTG----ctatttggag--aaaaaaaaaatgttggatccctacctcacaccatttcccaaaacaatttccagattaattaaagac---cctgtgtttcatttttttt-aactataaaagtattcaaaaaactataggaaaatatatttgtcttggggtaaggaagtcttcttaaaatataaaataaaaagttctatggaagattaattaattt i ponAbe2.chr19 C 0 I 163 s nomLeu3.chr10 102645792 213 - 106955855 TTGCCAAAACTTG----ctatttggaa--aaaaaaaa-aagttggagccctacctcacaccatttcccaaaacaacttccagattaattaaagac---cctgtgtttcatttttttttaactataaaagtattcaaaaaactataggaaaatatatttgtcttggggtaaggaaggcttcttaaaatataaaataaaaagttttatggaagattaattaattt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59931825 215 + 64156825 TTGCCAAAACTTA----ctatttggaag-aaaaaaaa-atgttggatccctacctcacaccatttcccaaaacaactttcagattaattaaagacctacctgtgtttcattttttt--aactataaaattattcaaaaaactataggaaaatatatttgtcttggggtaaggaaggcttcttaaaatataaaataagaagttctatggaagattaattaattt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47069294 216 + 51301725 TTGCCAAAACTTa----ctatttggaagaaaaaaaaa-atgttggatcCCTACCTCACATCATTTCCCAAAACAACTTTCAGATTAATTAAAGACCTAcctgtgtttcattttttt--aactataaaattattcaaaaaactataggaaaatatatttgtcttGGGGTAAGGAAggcttcttaaaatataaaataagaagttCTATGGAAGATTAATTAATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46775251 213 + 50890351 TTGCCAAAACTTA----CTATTTGGAAgaaaaaaaaa-atgttggatccctaccccacaccatttcccaaaacaactttcagattaattaaagacctacctgtgtttcattttttt--aactataaaattattcaaaaaactataggaaaatatatttgtcttggggtaaggaaggcttcttaaaatataaaat---aagttctatggaagattaattaattt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45340906 214 + 49145316 TTGCCAAAACTTGTTATCTATTAGGGA--ggaaaaaa-atgttggttccctacctcacaccattcccctaaacaacttccagattaattaaagacctacctgtgtttcattttttt--aattatcagagtattcaaaaaactataggaaaatttctttgtcttggggtagggagggcttcgtaaaatataaaataaaaagttctaTGGAGGATTAATTT---- i calJac3.chr22 I 300 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=1250223.000000 s hg38.chr19_GL949747v2_alt 72563 576 + 729520 gaccacttcaaatttcttaagttgtgtatgctaaaagacaAAACTGGAGGACAAATGATAGTACTGGCAGATATCACTTATTCACAAATCACACAAATTAAGAGTACAGGAAGGCTGTTgggtccggtggctcacagctgtaatcccagcactttgggaggccaaggtgggtgcatcacctgaggtcaggagttcaagaccagcctgaccaacatggtaaaatcccatctctactaaaaacagaaaaattagccaggcgtggtagtgctagcttgtagttccagctgtttgggatgctgagtaggagaattacttgaaccctagagtcggaggctgcagttagctgagatcatgccactgcactccagcctgggcaacagagtgagaactc----------------------------------catGGTGGCATG---------------CACTttgggaggctgaggctggaggattgtctgagcccaggaattcaaagctgcagtgagctatgatagagccaccgtactccagcccgggtgacacaatgagaccccatctctaa----aaatgaataaaaataaGggtcggg-tgagggggctcatgtttgtaatcccaacacttt s panTro4.chr19 59006035 576 + 63644993 gaccacttcaaatttcttaagttgtgtatgctaaaagacaAAACTAGAGGACAAATGATAGTACTGGCAGATATCACTTATTCACAAATCACACAAATTAAGAGTATAGGAAGGCTGTTgggtccggtggcccacagctgtaatcccagcactttgggaggccaaggtgggtgcatcacctgaggtcaggagttcaagaccagcctgaccaacatggtaaaatcccatctctactaaaaacagaaaaattagccaggcgtggtagtgctagcttgtagttccagctgtttgggatgctgagtaggagaattacttgaaccctagagtcggaggctgcagttagctgagatcatgccactgcactccagcctgggcaacagagtgagaactc----------------------------------catGGTGGCATG---------------CACTttgggaggctgaggctggaggattgtctgagcccaggagttcaaagctgcagtgagctatgatagagccactgtactccagctcgggtgacagaatgagaccccatctctaa----aaatgaataaaaataaGggtcggg-tgagggggctcatgtttgtaatcccaacacttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55884036 577 + 60714840 GACCACTTCAAATTTCTTAAGTTGTGTATGCTAAAAGACAAAACTAGAGGACAAATGAGAGTACTGGCAGATATCACTTATTCACAAATCACACAAATTAAGAGTACAGGAAGGCTgctgggtccggtggctcacagctgtaatcccagcactttgggaggccaaggtgggtgcatcacctgaggtcaggagttcaagactagcctgaccaacatggtaaaatcccatctctactaaaaacagaaaaattagccaggtgtggtagtgctagcctgtagttccagctgtttgggaggctgagtaggagaatcacttgaaccctagagtcggaggctgcagttagctgagatcatgccactgcactcccgcctgggcaacagagtgagaactc----------------------------------catGGTGGCATG---------------CACTttgggaggctgaggctggaggattctctgagcccaggagttcaaagctgcagtgagctatgatagagccactgtactccagcccgggtgacagaatgagaccccgtctctaa----aaatgaataaaaataaGggtcgggttgagggggctcatgtttgtaatcccaacacttt i ponAbe2.chr19 I 163 C 0 s nomLeu3.chr10 102646005 576 - 106955855 gaccacttcaaatttcttaagttgtgtatgctgaaagacaAAACTAGAGGACAAATGACAGTACTGGCAGATATCACTTATTCACAAATCACACAAATTAAGAGTACAGGAAGGCCgctgggtccggtggctcacagctgtaatcccagcactttgggaggccaaggtgggtgcatcacctgaggtcaggagttcaagaccagcctgaccaacatggtaaaatcccatctctactaaaaacagaaaaattagccaggcgtggtagtgctagcctgtagttccagctgtttgggaggctgagtaggagaatcacttgaaccctagagtcagaggctgcagttagctgagatcatgccactgcactccagcctgggcaacagagtgagaactc----------------------------------catGGTGGCATG---------------CACTttgggaggctgacgctggaggattgtctgagcctaggagtttgaagctgcagtgagctatgatagagccactgtactccagcccgggtgacagaatgagaccccatctctaa----aaatgaataaaaataaGggtcagg-tgagggggctcatgtttgtaatcccaacacttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932040 567 + 64156825 gaccacttcaaatttcttaagttgtgtatgctaaaagacaAAACTGGAGGACAAATGACAGTACTGGCAGACATCACTTATTCACAAATCACAC-----AAGAGTATAGGAAGGCTgccaggtgtggtagcttatggctgta-----agcgctttgggaggccaaggtgggtggatcacctgaggtcaggagttcaagaccagcctggccagcatggtgaaatcctgtctcaactaaaaacacaaaaattagtcgggtgtggtggtgctagcttgtagtcccagctgtttgggaggctgagcaggagaattgcttgaaccctagaggcggaggttgcagttagccaagatcatgccactgcactgcagcctgagcagcagagtgagaactc----------------------------------catGATGACGTG---------------CACTttgggaggctgaggctggaggattgcctgagcccaggagttcgaagctgcaatgaactatgatagagccacttcacgccagccttggtgacagaattaag---cgtctttaaaaataaataaataaaaataaGggtcagg-tgagggggctcatgtttgtaatcccagcacttt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47069510 572 + 51301725 GACCACTTCAAATTTCTTAAGTTGTGTATGCTAAAAGACAAAACTGGAGGACAAATGACAGTACTGGCAGACATCACTTATTCACAAATCACAC-----AAGAGTATAGGAAggctgccaggtgtggtggcttatggctgtaatcccagcgctttgggaggccaaggtgggtggatcacctgaggtcaggagttcaagaccagcctggccagcatggtgaaatcctgtctcaactaaaaacacaaaaattagtcgggtgagGTGGTGctagcttgtagtcccagctgtttgggaggctgagcaggagaattgcttgaaccttagaggcggaggttgcagttagccaagatcatgccactgcactgcagcctgagcagcagagtgagaaCTC----------------------------------CATGATGacgtg---------------cactttgggaggctgaggctggaggattgcctgagcccaggagttcgaagctgcaatgagctatgatagagccactgcactccagcctgggtgacagaatgaag---catctttaaaaataaataaataaaaataagggtcAGG-TGAGggggctcatgtttgtaatcccagcacttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46775464 572 + 50890351 gaccacttcaaatttcttaagttgtgtatgctaaaagacaAAACTAGAGGACAAATGACAGTACTGGCAGACATCACTTATTCACAAATCACAC-----AAGAGTATAGGAAGGCTgccaggtgtggtggcttatggctgtaatcccagcgctttgggaggccaaggtgggtggatcacctgaggtcaggagttcaagaccagcctggccagcatggtgaaatcctgtctcaactaaaaacacaaaaattagtcgggtgtggtggtgctagcttgtagtcccagctgtttgggaggctgagcaggagaattgcttgaaccctggaggcggaggttgcagttagccaagatcatgccactgcactgcagcctgggcaacagagtgagaactc----------------------------------catGATGATGTG---------------CACTttgggaggctgaggctggaggattgcctgagcccaggagttcgaagctgcaataagctatgatagagccactgcactccaggctgggtgacagaatgaag---catctttaaaaataaataaataaaaataaGggtcagg-tgagggggctcatgtttgtaatcccagcacttt i chlSab2.chr6 C 0 I 8 s calJac3.chr22 45341120 613 + 49145316 GACCGCTTCAGATTTCTTAAGTTGTGTATGCTAAAAGACAAAACTAGAGGACAAATGACAGTACTGGCAGACATCACTTATCCACAAATCACACAAATTAAGAGTGTAGGAAGGCTGCGGCGCTCAGT-gctcacacctgcaatcccagcactttgggaggccgagatgggtggatcacctgaggtcaggagttcgagaccaccctggccgacatggtgaaatcctatctctaccaaaaatgcaaaacttcgccagttgtggtggtgctagcctgtagtcccacctggttcagaagctgagcaggagaactgcttgaacccaggaggcggaggtt--------tcgtgagcacaccactgctctccaacctgggcaac--agtgagactccacccaccgaaaaaaaaaaaaaaaCCTTAgctaggcatggtggcatgcacctgtaattccaacactttgggagactgagg-tggaggattgtctgagctcaggagtttgaagctgcagtgagctatgatcgtgccactgcattccagcctgggtgacagaatgagaccctgtctctaa----aaaataaaaataataaGAgtcagg-catggtggctcatgcctgtaatcccagcacttt i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=65577.000000 s hg38.chr19_GL949747v2_alt 73139 36 + 729520 gggaggctgaggcagagggatcacctgaggtcagga s panTro4.chr19 59006611 36 + 63644993 gggaggctgaggcagagggatcacctgaggtcagga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55884613 36 + 60714840 gggaggctgaggcagagggatcacctgaggtcagga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102646581 36 - 106955855 gggaggctgaggcagagggatcacctgaggtccgga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932607 36 + 64156825 gggaggccaaggcagagggatcacctgaggtcagga i rheMac3.chr19 C 0 M 82 s papAnu2.chr19 47070082 36 + 51301725 gggaggccaaggcagagggatcacctgaggtcagga i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45341733 36 + 49145316 gggaggtcaaggcagatggatcacctgaggtcaggc i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46776036 8 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I a score=177720.000000 s hg38.chr19_GL949747v2_alt 73175 140 + 729520 gttccagaccagcctgaccaacatggggaaaccctgtctctactaaaaatacaaaaattatccgggcattgtggtgtgtgcctgtagtcccagctactcaggaggctgaggcaggagaatcccttgaacccaggaggtgg--- s panTro4.chr19 59006647 140 + 63644993 gttccagaccagcctgaccaacatggggaaaccctgtctctactaaaaatacaaaaattatccgggcattgtggtgtgtgcctgtagtcccagctactcaggaggctgaggcaggagaatcccttgaacccaggaggtgg--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55884649 140 + 60714840 gctccagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatacaaaaattacccgggcattgtggtgtgtgcctgtagtcccagctactcgggaggctgaggcaggagaatcccttgaacccaggaggtgg--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102646617 140 - 106955855 gttccagaccagcctgaccaacatggtgaaaccctgtctctactaaaaataaaaaaattatccaggcattgtggtgtgtacctgtagtcccagctactcgggaggctgaggcaggagaatcccttgaactcaggaggtgg--- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47070118 140 + 51301725 gttccagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattatctgggcactgtggtgcatgcctgtagtcccagctactcgggaggctgaggcaggagaatcccttgaacccaggaggtgt--- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45341769 143 + 49145316 gtttcagaccagcctggccaacatggtgaaaccccatttctactaaaaatacaaaaactagctagacattgtggtgcgtgcctgtagtcccagctacgcgggaggctgaggcaggagaatcccttgaaccaaggaggcagagg i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46776036 8 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59932643 82 + 64156825 M a score=110055.000000 s hg38.chr19_GL949747v2_alt 73315 91 + 729520 ttgcagtgagccgagattgcaccactgcactccggcctgggcgacagagagaaactggtctcaaaataaataaataaataaataaa-------at-aaa s panTro4.chr19 59006787 95 + 63644993 ttgcagtgagccgagattgcaccactgcactctggcctgggcgacagagagaaactggtctcaaaataaataaataaataaataaata---aaat-aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55884789 99 + 60714840 ttgcagtgagccgagactgcaccactgcactccggcctgagcgacagagagagactggtctcaaaataaataaataaataaataaataaataaataaaA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102646757 79 - 106955855 ttgcagtgagccaagattgcaccactgcactctggcctgggcgacagag----actggtctctaaataagtaaataaata----------------aaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932726 89 + 64156825 ttgcagtgagctgagatcgtaccactgcactccaacctgggcgacagag----ACTCATCTCaaaataaataaataaaataaaata-----aaat-aaa i rheMac3.chr19 M 82 I 10 s papAnu2.chr19 47070258 89 + 51301725 ttgcagtgagctgagatcgtaccactgcactccaacctgggcgacagag----actcatctcaaaataaataaataaaataaaata-----aaat-aaa i papAnu2.chr19 C 0 I 56 s calJac3.chr22 45341912 91 + 49145316 ttgcagtgagccaagactgtgccattgcactccagcctggacgacagagggagatctgtttcaaaaaaaaaaaaaaaaaaaaaaaa------aGT-AG- i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46776036 8 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I a score=92477.000000 s hg38.chr19_GL949747v2_alt 73406 115 + 729520 taGGTAGAGATAGCTATA-GCGACACTGAAATATCTCCAAAAGAGTTtttgtttgtttgtttgtttgtttgtttttgaagtggagtcttgcac-tgtcacccaggctggagtgcagt s panTro4.chr19 59006882 111 + 63644993 taGGTAGAGATAGCTATA-GTGACACTGAAATATCTCCAAAAGAGTTtttgtttgtttgtttgtttgttt----ttgaggtagagtcttgcac-tgtcacccaggctggagtgcagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55884888 115 + 60714840 TAGGTAGAGATAGCTATA-GTGACACTGAAATATCTCCAAGAGAGTTtttgtttgtttgtttgtttgtttgtttttgaggtggagtcttgcac-tgtcacccaggctggagtgcagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102646836 107 - 106955855 TAGGTAGAGATAGCTATA-GTGACACTGAAATATCTCCAAGAGAGtttttgtttgtttgtttgttt--------ctgaggtggagtcttgcac-tgtcacccaggctgcagtgcagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932825 106 + 64156825 aAGGTAGAAATAGCTATA-GTGACATTGAAATATCTCCAAGAG-Gtttttgtttgtttttttgttt--------ttgagacggagtctcgccc-tgtcgcccaggctggagtgcagt i rheMac3.chr19 I 10 C 0 s calJac3.chr22 45342003 91 + 49145316 TATGTAAATACAGATATGTGTGTGGTTG----------CATGGAATTTTTTTTTTTTT----------------TTGATAAGGAGTTTTACTCTTATTTCCCAGGCTTGAGTGTAAT i calJac3.chr22 C 0 I 1511 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46776036 8 + 50890351 I e papAnu2.chr19 47070347 56 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I a score=19761.000000 s hg38.chr19_GL949747v2_alt 73521 30 + 729520 ggcgcgatctcagcttactgcaa---------------------------cctctgc s panTro4.chr19 59006993 30 + 63644993 ggcgcgatctcagcttactgcaa---------------------------cctctgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885003 30 + 60714840 ggcgtgatctcagcttactgcaa---------------------------cctctgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102646943 57 - 106955855 ggcacaatctcagcttactgcagggctgggattacctgttttacctcagctctctgc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932931 30 + 64156825 ggcacgatctcggctcactgcaa---------------------------cctccgc i rheMac3.chr19 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e calJac3.chr22 45342094 1511 + 49145316 I e chlSab2.chr6 46776036 8 + 50890351 I e papAnu2.chr19 47070347 56 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I a score=9083.000000 s hg38.chr19_GL949747v2_alt 73551 9 + 729520 ctcctgggt s panTro4.chr19 59007023 9 + 63644993 ctcctgggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885033 9 + 60714840 ctcctgggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647000 9 - 106955855 ctcctgggt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932961 9 + 64156825 ctcccaggt i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45343605 9 + 49145316 ctcccgacc i calJac3.chr22 I 1511 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46776036 8 + 50890351 I e papAnu2.chr19 47070347 56 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I a score=280323.000000 s hg38.chr19_GL949747v2_alt 73560 205 + 729520 tcaagcgattctcttgcctcagcctcctgagtagctgggattacaggtgcgtcccaccacacccggctaatttttttttttttttttttttttttttagtagagacggggtttcaccacattagccaggatgatctcgatc---tgaccttgtg--atccgcccgcctctgcctcccaaagtgctgggattacag--acgttggccattgcg s panTro4.chr19 59007032 205 + 63644993 tcaagcgattctcttgcctcagcctcctgagtagctgggattacaggtgcgtcccaccacacccggctaatttttttttttttttttttttttttttagtagagacggggtttcaccacattagccaggatgatctcgatc---tgaccttgtg--atccgcccgcctctgcctcccaaagtgctgggattacag--acgttggccattgcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885042 204 + 60714840 tcaagtgattctcttgcctcagcctcctgagtagctgggattacaggtgcgtcccaccacacctggctaa-tttttttttttttttttgtaatttttagtagagatggggtttcaccacattagccaggatggtctcgatc---tgaccttgtg--atccgcccacctctgcctcccaaagtgctgggattacag--acgttggccattgcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647009 191 - 106955855 tcaagcgattctcttgcttcagcctcctgagtagctgggattacaggtgtgtcccaccacacctggctaatatatttt--------------tttttagtagagacggggtttcaccacgtt--ccaggatggtctccatc---tgacctcgtg--atctgcccgcctctgcctcccaaagtgctgggattacagacacgttggccattgcg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932970 203 + 64156825 tcaagcgattctcctgcctcagcctcctgagtaactgggattacagacgcgtcccaccatatccggctaa-ttttttttttttttttttgt-tttttagtagagatggggtttcaccgtgttagccgggatggtcgcgatc---tgacttcatg--atccgcccgcctcggcctcccaaagtgctgggattacag--acatgagctactgtg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47070403 205 + 51301725 tcaagcgattctcctgcctcagcctcctgagtaactgggattacagacgcgtcccaccatgtccggctaatttttttttttttttttttgtatttttagtagagatggggtttcaccgtgttagccgggatggtctcgatc---tgacttcatg--atctgcccacctcggcctcccaaagtgctgggattacag--acatgagctactgtg i papAnu2.chr19 I 56 C 0 s calJac3.chr22 45343614 194 + 49145316 tcaggtgatctgcccgccttggcctccaaagt-gctcggattacaggcgtgagccaccacgcctggccA---------------TGTGtgtagtttcagtagagatggggtttcaccatgttgcccaggctggtctcagactcttgagctcaagccatccacccaccttgtcttcccaaagggctgggattacag--acgtgagccactatg i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46776036 8 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I a score=310651.000000 s hg38.chr19_GL949747v2_alt 73765 193 + 729520 cccagccCAaga-tcctatttcttaagccct-gtactgtgccaggctcagggttttgcacatgtgatttgatgagat-ctcacagcggcccattttacagagaaggaaatggagtcttagcaagctgtgacttgttctaggtcatatggtcacatataaatgaatacgatggtgaaactgaggtcctagcttaggc-- s panTro4.chr19 59007237 193 + 63644993 cccagccCAaga-tcctatttcttaagccct-gtactgtgccaggctcagggttttgcacatgtgatttgatgagat-ctcacagcggcccattttacagagaaggaaatggagtcttagcaagctgtggcttgttcaaggtcatatggtcacatataaatgaatacgatagtgaaactgaggtcctagcttaggc-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885246 191 + 60714840 cccagccCAaga-tcctatttcttaagccct-gtactgtgtcaggctcagggttttgcacatgtgatttgatgaaat-ctcacagcggcccattttgccgagaaggaaatggagtcttagcaagctgtggcttgttcaaggtcatgtggt--catataaatgaatacgatggtgaaactgaggtcctagcttaggt-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647200 191 - 106955855 cccagccCAaga-tcctatttcttaagccct-gtactgtgccaggctcagggttttgcacatgtgatttgatgaaat-ctcacagcggcccattttacagagaaggaaatgaagtcttagcaagctgtggcttgttcaaggtcatatggt--catatcaatgaatacgatggtaaaactgaggtcctagcttaggc-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59933173 171 + 64156825 cccggtcCAaga-tcctatttcttaagccct-gcactgtgccaggctcagggttttgcacatatgatttgataaaat-ttcacagcggcccattttacagagaaggaaatggagtcttagcaagctgtggcttgttcaaagt----------cgtataaatgaatacgatggtgaaactgaggc-------------- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47070608 171 + 51301725 cccggtcCAAGA-TCCTATTTCTTAAGCCCT-GCACTGTGCCAGGCTCAGGGTTTTGCACATGTGATTTGATGAAAT-TTCACAgcggcccattttacagagaaggaaatggagtCTTAGCAAGCTGTGGCTTGTTCAAAGT----------CGTATAAATGAATACGATGGTGAAACTGAGGC-------------- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45343808 149 + 49145316 -ccggccCAAGA-TCCTGTTTCTTAAGCCCTGGCACAGTGCCAGGCTCAGGGTTTTGTACATGTGATTTTATGAAAT-TTCTCAGTGGCCCATTTTACAGAGAAGGAAATGGAGTCTTGGCACACTGTGGCTTATT--------------------------AATACGATAGTGAAGC-------------------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19575836 180 - 122678785 ccaagatcaagagtcccatgctctatggact-gagcta-gccaggcTCCTGG-TAtacatgggtgattttattaaatcctcacaatagcctatttcacagagaaggaaactgag---tagcaagtgatgctttgttcaaagt------------tgcaagtgaataatatggtgaaagtggggttctagcttagagat i canFam3.chr1 I 1653 C 0 e mm10.chr7 3612073 3275 + 145441459 I e chlSab2.chr6 46776036 8 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I a score=163610.000000 s hg38.chr19_GL949747v2_alt 73958 58 + 729520 ctctgcctcagaagttcctggtcttcagtactcacctataatgGCCACTAAGGGGAAT s panTro4.chr19 59007430 58 + 63644993 ctctgcctcagaagttcctggtcttcagtactcacctataatgGCCACTAAGGGGAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885437 58 + 60714840 ctctgcctcagaagttcctggtcttcagtactcacctataatgGCCACTAAGGGGAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647391 58 - 106955855 ctctgcctcagaagttcctggtcttcagtactcacctataatgGCCACTAAGGGGAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59933344 58 + 64156825 ctctgcctcagaagttcctgctcttcagtactcACCTATAATGACCACTAAGgggaat i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47070779 58 + 51301725 CTCTGCCTCAGAAGTTCCTGCTCTTCAGTACTCACCTATAATGACCACTaaggggaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776044 58 + 50890351 CTCTGCCTCAGAAGTTCCTGCTCTTCAGTACTCACCTATAATGACCACTAAGGGGGGT i chlSab2.chr6 I 8 C 0 s calJac3.chr22 45343957 58 + 49145316 CTCTGCCTCTGAAGCGCCTGGCCTTCACTCCTCACCTATAATGGCCACTAAAGGGAAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19576016 58 - 122678785 ctttagttccaaagttcatggtctttactactcacctatcctgGTCACTAAagggagt i canFam3.chr1 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e macFas5.chr19 54942282 1 + 59248254 I a score=526563.000000 s hg38.chr19_GL949747v2_alt 74016 185 + 729520 --------GAGAAAA----GAAGGA--------------------AGGAATGGA-------------------------GGGAGGGAGGAAAATAAGGATATCTGGGATGGGATTGGGCACCAAAATAAAATCTGAGTAAT----TGGAAAAGGGGTGTCAGCAACA-AAAGGAGAGTGGATGGGGTGG-CTACTCACCAGACGGAGTGATGTCTGTGTGACACAGAGGCCCTGTAGGAGGTTGAGGG s panTro4.chr19 59007488 185 + 63644993 --------Gagaaaa----gaagga--------------------aggaatgga-------------------------gggagggaggaaaataagaaTATCTGGGATGGGATTGGGCACCAAAATAAAATCTGAGTAAT----TGGAAAAGGGGTGTCAGCAACA-AAAGGAGAGTGGATGGGGTGG-CTACTCACCAGACGGAGTGATGTCTGTGTGACACAGAGGCCCTGTAGGAGGTTGAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885495 190 + 60714840 --------Gagaaaagaaggaagga--------------------aggaatgga-------------------------gggagggaggaaAATAAGGATATCTGGGATGGGATTGGGCACCAAAATAAAATCTGAGTAGT----TGGAAAAGGGGTGTCAGCAACGTAAAGGAGAGTGGATGGGGTGG-CTACTCACCAGATGGAGTGATGTCTGTGTGACACAGAGGCCCTGTAGAAGGTTGAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647449 190 - 106955855 --------GAgaagagaaggaagga--------------------aggaatgga-------------------------gggagggaggaaAATAAGGATATCTGGGATGGGATTGGGCACCAAAATAAAATCTGAGTAGT----TGGAAAAGGGGTGTCAGCAACATAAAGGAGAGTGGATGGGGTGG-CTACTCACCAGACGGAGTGATGTCTGTGTGACACAGAGGCCCTGTAGAAGGTTGAGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59933402 190 + 64156825 --------gagaaaagaaggaagga--------------------atggaggga-------------------------gggagggaggaaaataaggaCTTCTGGGATGGGATTGGGCACCAAAATAAAATCTGAGTAGT----TGGAAAAGGGGTGTCAGCGACATAAAGGAGAGTGGATGGGGCAG-CTACTCACCAGATGGAGTAATGTCCGTGTGACACAGAGGCCCTGTAGAAGGTTGAGGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47070837 190 + 51301725 --------gagaaaagaaggaagga--------------------atggaggga-------------------------gggagggaggaaaataaggacttctgggatgggaTTGGGCACCAAAATAAAATCTGAGTAGT----TGGAAAAGGGGTGTCAGCGACATAAAGGAGAGTGGATGGGGCAG-CTACTCACCAGATGGAGTAATGTCCGTGTGACACAGAGGCCCTGTAGAAGGTTGAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776102 210 + 50890351 --------GagaaaagaaggaaggaaggaaggaaggaaTggagggagggaggga-------------------------gggagggaggAAAATAAGGACTTCTGGGATGGGATTGGGCACCAAAATAAAATCTGAGTAGT----TGGAAAAGGGGTGTCAGCGACATAAAGGAGAGTGGATGGGGCAG-CTACTCACCAGATGGAGTAATGTCCGTGTGACACAGAGGCCCTGTAGAAGGTTGAGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45344015 190 + 49145316 --------Gaggaaa----gaagga--------------------aggaatgga-------------------------gggagggaggaaAATAAGGACATCGGGGATGGGATTGGGCACCACAATAAAATCTGAGTCGTTTTATGGAAAAGCAGTGTCAGCGACATGAAGGAGAGCGGAAGGGGTGG-CTACTCACCAGGTGGAGTGCTGTCCGTGTGACACAGAGGCCCTGTAGAAGGGGGAGGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3615348 185 + 145441459 --------gaggaag----ggatgg--------------------aaggagaga-------------------------ggaagagaggggaatgagggaATCTGGGGTGAAGCTAGGCACAAAGATAAAA--TGAGTTGT----TGGAGGCGAGGTGTGAGCAGCATAGCATAGAGCAGGTGGAGTCTCCCACTCACCTGTTGGTGTGAAGTCAGCACGGCATGCAGGCCCTGCAGAAGGTGAAGAG i mm10.chr7 I 3275 I 4 s canFam3.chr1 19576074 186 - 122678785 aagatgagaaggaaagaaagggggg--------------------agaaagggaagaaaagatgtaagaagagaggagcgggagggagggaAATCTGGAAATCTGGGGTGAGCTTGGGCACCAAAATAAAATCTGAGTAGT----TGGAAATGGGCTGTCAGTGGCTTACAGCTGAATGGCTGGGGGATATTACTCACCAGTTGGAGTGA-------------------------------------- i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I a score=52770.000000 s hg38.chr19_GL949747v2_alt 74201 36 + 729520 ACTAGtttc--------tttttcctttttttttttt-tgtctgag s panTro4.chr19 59007673 35 + 63644993 ACTAGtttc--------tttttcctttttttttttt--gtctgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885685 27 + 60714840 ACTAGtttc----------------ttttttttttt--gtctaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647639 37 - 106955855 ACTAGttcc--------tttttttttttttttttttttgtctgag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59933592 34 + 64156825 ACTAGTTCC---------tttttttttttttttttt--gtctgag i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47071027 39 + 51301725 actagttcc----ttttttttttttttttttttttt--gtctgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776312 32 + 50890351 ACTAGTTCC-----------tttttttttttttttt--gtctgag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45344205 43 + 49145316 GCTAGTTCCTTCCttttttttttttttttttttttt--gtctgag i calJac3.chr22 C 0 C 0 s canFam3.chr1 19576260 8 - 122678785 -----------------------------------T--GTCTGAA i canFam3.chr1 C 0 C 0 e mm10.chr7 3615533 4 + 145441459 I e macFas5.chr19 54942282 1 + 59248254 I a score=355346.000000 s hg38.chr19_GL949747v2_alt 74237 158 + 729520 gcagactctcactctgtcgcccaggctggagtgtagtggtgtgatctcagctcactgcaacctctgcctcccaggttcaagtgattctcctgcctcagcctccgtagtagctgggactacaagtgcccgccaccacaccaggctaatctttgtatttt s panTro4.chr19 59007708 158 + 63644993 gcagagtctcactctgtcgcccaggctggagtgtagtggtgtgatctcagctcactgcaacctctgcctcccaggttcaagtgattctcctgcctcagcctccgtagtagctgggactacaagtgcccgccaccacaccaggctaatctttgtatttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885712 158 + 60714840 acagagtctcactctgtcgcccaggctggagtgtagtggtgtgatctcagctcactgcaacctctgcctcccaggttcaagcgattcccctgcctcagcctccgtagtagctgtgactacaagtgcccaccaccacaccaggctaatctttgtatttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647676 158 - 106955855 acagagtctcactctgtcgcccaggctggcgtgtagtggtgtgatctcagctcaatgcaacctctgcctcccaggttcaagtgattctcttgccttagcctccatcatagctgggattacaagtgcccgccaccacaccgggctaattttggtatttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59933626 158 + 64156825 acagagtcttgctctgttgctcaggctggagtgtagtggtgcgatctcagctcactgcaacctctgcctcccaggttcaagcgattcttctgcctcagcctccctagtagccaggactacaggtgcccgccaccacactaggctaatttttgtatttt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47071066 158 + 51301725 acagagtcttgctctgttgcccaggctggagtgtagtggtgtgatctcagctcattgcaacctctgcctcccaggttcaagcgattcttctgcctcagcctccctagtagccaggactacaggtgcccgccaccacactaggctaatttttgtatttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776344 158 + 50890351 acagagtcttgctctgccgcccaggctggagtatagtggtgtgatcccagctcactgcaacttctgcctcccaggttcaagcgattcttctgcctcagcctccctagtagccgggactacagatgcccgccaccacaccagactaatttttgtatttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45344248 158 + 49145316 aaggagtctcattctgtctcccaggctagaatgcaatggctcgatcttggctcactgcaacctctgcctcctgggttcaagtgattttcctgcctcaaccccccaagtagctgggactacaggtgcctgccaccacacccagctaatttttgtatttt i calJac3.chr22 C 0 C 0 e mm10.chr7 3615533 4 + 145441459 I e canFam3.chr1 19576268 0 - 122678785 C e macFas5.chr19 54942282 1 + 59248254 I a score=220726.000000 s hg38.chr19_GL949747v2_alt 74395 113 + 729520 tagtagaga-ggggtttcgccatgttggtcaggctggtcttgaactcctgtcc-tcaggtgatccacccgcc-tcgg-cctcccaaagtgctgggcctcggctcccacaggcatgag s panTro4.chr19 59007866 105 + 63644993 tagtagaga-ggggttttgccatgttggtcaggctggtcttgaactcctgtcc-tcaggtgacccgcccgcc-tcgg-cctcccaaagtgctgggatt--------acaggcatgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885870 106 + 60714840 tagtagagatggggtttcgccatgttggtcaggctggtcttgaactcctgtcc-tcaggtgatccgcctgcc-tctg-cctcccaaagtgctgggatt--------acaggcatgag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647834 106 - 106955855 tagtagagatggggtttcgccatgttggtcaggctgatcttgaaatcctgacc-tcaggtgatccgcccgcc-tcgg-cctcccaaagtgccgggatt--------acaggcgtgag i nomLeu3.chr10 C 0 M 2603 s rheMac3.chr19 59933784 106 + 64156825 tagtagagacagagttttgccatgttggtcaggctgttcttgaactcctgtcc-tcaggtaatccgcccgcc-tcag-cctcccaaagtgctgggatt--------acaggtgtgag i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47071224 106 + 51301725 tagtagagacagggtttcgccatgttggtcaggctgttcttgaactcctgtcc-tcaggtgatccgcccgcc-tcag-cctcccaaagtgctgggatt--------acaggcgtgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776502 106 + 50890351 tagtagagacagggtttcgccatgttggtcaggctggtcttgaactcctgtcc-tcaggtgatctgcccgcc-tcag-cctcccaaagtgctgggatt--------acaggcgtgag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45344406 108 + 49145316 tagtagagccagggtttcgccatattggtcaggctggtcttgaactcctggcctttgggtgatccaccccccttcag-cctcccaaagtgcagggatt--------acaggcgtgag i calJac3.chr22 C 0 C 0 s canFam3.chr1 19576268 58 - 122678785 ----TGACACAGAG----GCCCTGTAGATCA---------------------C-GGAGGGG----------C-TAAGTCTTTTCAAAGTTCTAGGCTT--------C---------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3615533 4 + 145441459 I e macFas5.chr19 54942282 1 + 59248254 I a score=30122.000000 s hg38.chr19_GL949747v2_alt 74508 21 + 729520 ccgctgcgcccAACAGCGAGT s panTro4.chr19 59007971 21 + 63644993 ccactgtgcccgacAGCGAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885976 21 + 60714840 ccactgtgcccgacAGCGAGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59933890 21 + 64156825 ccactgtgcctgacAGCGAGT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47071330 21 + 51301725 ccactgtgcccgacagCGAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776608 21 + 50890351 ccactgtgcccAACAGCGAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45344514 20 + 49145316 ccaccCAGCC-GGCAACTAGT i calJac3.chr22 C 0 C 0 e mm10.chr7 3615533 4 + 145441459 I e canFam3.chr1 19576326 0 - 122678785 C e nomLeu3.chr10 102647940 2603 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I a score=1172918.000000 s hg38.chr19_GL949747v2_alt 74529 623 + 729520 TCTTTTCAAAACCCTTTGTGGCCAGCCCCATCTCATT--GGTAACCCAGGAATCTGAGTTCCCAGCTCCTATCTCCTCTGGGAAATGAGAATCTTATCCCTCCCTCCTCCTGTCTCAGTAGGCAGAAATTTGGACATCCATTGCCCACCTACCGAA-------GAAGTCTGAACGCAGACCCCTCTGGCCTGGGCAACCAAGAGTTCAGGCCCTTGAACTCCACC-TTTCCAGGGAACAATGAT------CGTAGAGTTTCTCCTCTCACGAGTTCAGGAATCTGGGTCCCCATTTCCCTCTTCTCTCAGGAGCTAAGAGCCCTGTTCCCAGCCCCCTTTTCCCAGGGAATCAGGAGTCCTGGCTTCCATCCCCCTCCCATATAAGAATCTGGGAGTCCTCCCTGTCTCCTGACCTCTTCCTGCCTCAAGAACCAGAGATACCTGTCCCCA-------CCTCCTTCCTCTTTCGGGAA-------------TCTGTGTTCTCTTGCTTTAGGACCCAGGGGTCTGGGCCCCAGCCCTG-TTCTTTATTTGAACCTAGAATCCCAAACC---------TGCTGCCTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTGGGTCTCCATTGC--CTCTCTCTCTGCCCCCAACCCCAGCCAGGAACCCAGGGAGAAGAAAGGGGT-- s panTro4.chr19 59007992 623 + 63644993 TCCTTTCAAAGCCCTTTGTGGCCAGCCCCATCTCATT--GGTAACCCAGGAATCTGAGTTCTCAGCTCCTATCTCCTCTGGGAAATGAGAATCTTATCCCTCCCTCCTCCTGTCTCAGTAGGCAGAAATTTGGACATCCATTGCCCACCTACCGAA-------GAAGTCTGAACGCAGACCCCTCTGGCCTGGGCACCCAAGAGTTCAGGCCCTTGAACTCCACC-TTTCCAGGGAACAATAAT------CGGAGAGTTTCTCCTCTCACGAGTTCAGGAATCTGGGTCCCCATTTCCCTCTTCTCTCAGGAGCTAAGAGCCCTGTTCCCAGCCCCCTTTTCCCAGGGAATCAGGAGTCCTGGCTTCCATCCCCCTCCCATATGGGAATCTGGGAGTCCTCCCTGTCTCCTGCCCTCTTCCTGCCTCAAGAACCAGAGATACCTGTCCCCA-------CCTCCTTCCTCTTTCGGGAA-------------TCTGTGTTCTCTTGCTTTAGGACCCAGGGGTGTGGGCCCCAGTCCTG-TTCTTTATTTGAACCTAGAATCCCAAACC---------TGCTGCCTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTGGGTCTCCATTGC--CTCTCTCTCTGCCCCCAACCCCAGCCAGGAACCCAGGGAAAAGAAAGGGGC-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885997 631 + 60714840 TCCTTTCAAAGCCCTTTGTGGCCAGCCCCATCTCATT--GGTAGCCCAGGAATCTGAGTCCCCAGCTCCTATCTCCCCTGGGAAATGAAAATCTTATCCCTCCCTCCTCCTGTCTCAGTAGGCAGAAATTCAGACATCCATTGCCCACCTACTGAA-------GAAGTCTGAACGCAGACCCCTCTGGCCTGGGCACCCAAGAGTTCAAGCCCTTGAACTCCACC-TTTCCAGGGAACAATAAT------CG-AGAGTTTCTCCTCTCACGAGTTCAGGAATCTGGGTCCCCATTTCCCTCTTCTCTCAGGAGCTAAGAGCCCTGTTCCCAGCCCCCTTTTCTCAGGGAATCAGGAGTCCTGGCTTCCATCCCCTTCCCACATGACAATCTAGGAGTCCTCCCTGTCTCCTGCCCTCTTCCTGCCTCAAGAGCTAGAGAGACCTGTCCCCACCTCCTTCCTCCTTCCTCTTTCGGGAA-------------TCTGTGTTCTCTTGCTTTAGGACCCAGGGGTCTAGGCCCCAGTCCTG-TTCTTTATTTGAACCTAGAATCCCAAATC---------TGCTGCCTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTGGGTCTCCATTGCCTCTCTCTCTCTGCCCCCAACCCCAGCCAGGAACCCAGGGAGAAGAAAGGGGC-- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59933911 623 + 64156825 TCCTTTCAAAGCCCTTTGTGGCCAGCCCCATCTCACT--GGTAGCCCCAGAATCTGAGTCCCCAGCTCCTCTCTCCTCTGGGAAATGAGAATCTTATCCCTCCCTCCTCCTGTCTCCGTAGACAGAAATTCGGACTTCCATTGCCCACCTACTGAA-------GAAGTCTGAACGCGGACCCCTCTGGCCTGGGCACCCAAGAGTTCAGGCCCTTGAACTCCACC-TTTCCAGGGGGC---------------AGAGCTTCTCCTCTCCTGGGTTCAGGAATCTGGGTCCCCATTTCCGTCTTCTCTCAGGAGCTAAGAGCCCTGTTCCCAGCCCCC--TTCCCAGGGAATCAGGAGTCCTGGCTTCCATCCCCCTCCCATATGAGAATCTAGGCGTCCTCCCTGTCCCCTATCCTCTTCCTGCCTCAAGATCCAGAGATACCTGTCCCCG-------CCTCCTTCCTCTTTCGAGAC-------------TCTGTGTTCCCTTGCTTTAGGACCCAGGGGTCTGGGCCCCAGTCCTG-TTCTTTATTTGAACCTAGAATCCCAAAGCTCCAGCTAGTGCTGCCTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTAGGTCTCCATTCTCTCTCTCTTTCTGCCCCCCACCCCATCCAGGAACCCAGGGAGAAGGAAGGGGC-- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47071351 625 + 51301725 TCCTTTCAAAGCCCTTTGTGGCCAGCCCCATCTCACT--GGTAGCCCCAGAATCTGAGTCCCCAGCTCCTCTCTCCTCTGGGAAATGAGAATcttatccctccctcctcctgtctCCGTAGACAGAAATTCGGACTTCCATTGCCCACCTACTGAA-------GAAGTCTGAACGCGGACCCCTCTGGCCTGGGCACCCAAGAGTTCAGGCCCTTGAACTCCACC-TTTCCAGGGGGC---------------AGAGCTTCtcctctcctgggttcaggaaTCTGGGTCCCCATTTCCGTCTTCTCTCAGGAGCTAAGAGCCCTGTTCCCAGCCCCCTTTTCCCAGGGAATCAAGAGTCCTGGCTTCCATCCCCCTCCCATATGAGAATCTAGGAGTCCTCCCTGTCCCCTATCCTCTTCCTGCTTCAAGATCCAGAGATACCTGTCCCCG-------CCTCCTTCCTCTTTCGGGAA-------------TCTGTGTTCCCTTGCTTTAGGACCCAGGGGTCTGGGCCCTAGTCCTG-TTCTTTATTTGAACCTAGAATCCCAAAGCTCCAGCTAGTGCTGCCTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTGggtctccattctctctctctttctgccccccaccccatcccggaacccagggagaaggaaggggc-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776629 625 + 50890351 TCCTTTCAAAGCCCTTTGTGGCCAGCCCCATCTCACT--GGTAGCCCCAGAATCTGAGTCCTCAGCTTCTCTCTCCTCTGGGAAATGAGAATCTTATCCCTCCCTCCTCTTGTCTCAGTAGACAGAAATTCGGACTTCCATTGCCCACCTACTGAA-------GAAGTCTGAACGCAGACCCCTCTGGCCTGGGCACCCAAGAGTTCAGGCCCTTGAACTCCACC-TTTCCAGGGGGC---------------AGAGCTTCTCCTCTCCTGGGTTCAGGAATCTGGGTCCCCATTTCCCTCTTCTTTCAGGAGCTAAAAGCCCTGTTCCCAGCCCCCTTTTCCCAGGGAATCGGGAGTCCTGGCTTCCATCCCCCTCCCATATGAGAATCTAGGAGTCCTCCCTGTCCCCTATCCTCTTCCTGCCTCAAGATCCAGAGATATCTGTCCCCA-------CCTCCTTCCTCTTTCGGGAA-------------TCTGTGTTCCCTTGCTTTAGGACCCAGGGGTCTGGACCCCAGTCCTG-TTCTTTATTTGAACCTAGAATCCCAAAGCTCCAGCTAGTGCTGCCTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTGGGTCTCCATTCTCTCTCTCTTTCTGCCCCCCATCCCATCCAGGAACCCAGGGAGAAGGAAGGGGC-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45344534 627 + 49145316 TCCTTTCAAAGCCTTTTCTGGCCAGCCCCATCTCATT--GGTATCCCAGGAATCTGAGTCCCCCACTCCTCTCTCCTATGGGAAACAAGAATCTTATACCTCCCTCGTTCTGTCTC---AGGCAGAAATGCAAACTCCCATTACCCAGCAACTGAA-------AACGTCTGAACCCAGACCCCTCTGGCCTGGGAACCCAAGAGTTCAGGCCCTTGAACTCCCCC-TTTTCAGGAGACAGTGAT------CGAAGAGTTTCTCCTCTCCTG-GTTCAGGAATCTGAGTCTCCATTTCCCTGTTCTCTCAGGAGCTACGAGCTCTGTTCCCAGCCCCCTTTCACCAGGGAATTAGGAGTCCTGGCTTCCATCCCCATCCCGTGTGAGATTCTAGAAGTCCTCCCTGTCCGCTACCCTCTTCCTGCCTCAGGATCCAGAGAGACCTGTCCCCA-------TCTCCTTCCTCTTACGGGAA-------------TCTGTCTTCTCTTACTTTAGGACCCAGGGGTCTGGGCCCCAGTCCTG-TTCTTTATTTGAACCTAGAATCTCAAGCCCCCAGCTCGTGCTG-CTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTGGGTCTCCATCGC--CTCTCTCTCTGCCCCCCACCCCAGCCAGGAACTCAGGGAGGAGGAAGGGGC-- i calJac3.chr22 C 0 C 0 s mm10.chr7 3615537 496 + 145441459 TTTTTACAAAGCCCTTTGTGGACTACCGTCTCCCCTCTAAGGAGCCCTAGACTCTGATT-------------------------ACATGAAGCCTGCCACCGTCTTTTTTAGGATC---AAGCAAAACTCTGTACTTCCATTCCCCA--TACTTAA-------GAAG---------------CTGCTGTCTG---ACCCAAGAGGACAGGCCTCTGTTCCCCACC-TTTCCTAAGAACAATACTTTGCTCCTTGGGGTTTCTCTGCCTTGGGGTTTGAAGGTTTAGATGCCC--------CCTCCCTCCAGCAC-AGTAGACTTG---------CCCATTTACCATGAGAACTGAAT---------------------------ACATTCTTTGACCCCTAGATATCCCTTACTCTCCT-CTGCCTGGAGATCCAGAGAAACCTATGCTCA-------CCCCCGACC-----CAGCAA-------------TCTGTCTTCCCCCG-TTTAGGACTCAGGTATCTGGGTACCAGTCCTGATTCCTTTTTCTAAATTGGA-------------------TGTTGAAT---------------------------------------------------TCCATATG--AACAG--------------------------ATATAGCCCTCAGCCCAGCCAAGGATCCACACACAGGGGAGGGAC-- i mm10.chr7 I 4 C 0 s canFam3.chr1 19576326 597 - 122678785 TC-------------------CCAGCTTCACCTCACT--GCAAACCCAGGAATCTAAATC------------TTCCTCTGGGAAACAGGAATCTTACCCATATGTCCTCTT---TCAGTAGCCAGAACTGCAGGCTCTTAATCCCTGCCTACTTCATTAGTCTGAAGTCTGGCCCCAGCCCCCTCTTGCCTCTACACCC-AGTGTCCAGACCCCTGGACTCCACCTTTTCCAGGAGACAGTAATCTGAGCCC-ACAGTGTCTCCTCTCTGGGGTCCAGGAGTCTGGGTCCCCAGCTCCCTTCT------------------------------------TTCCCAGAGACCCAGGTCTTCTGGCTTCC-TCTTCTTCCCACATCAGAGTCTAGGATTC------------TACATTTGTCAT---------TCCCAAGAGTTCAGTCCTTA-----------------------GGAAGGAATTCAAGACCTCTGTGTTCTCCTGTGTTAGGACCCAAGGATCTGGGTCCT-GTCCCC-TTAT---TCTGGGTCTAGAATTCTGAACCCTCAGCTAGTGCTGTCTGACCATCCCGCACCTACCCTCAGAGGGACTCAGTAGCCCTCTTCCGTTCCCTCTCCCTGCTCAGAGTGTCCAGGTCCCCAGAGC--CTGTCTCTCTGCACCCAAG-CCAGCCTGGGACCCAGGGAGAAGGGGGAGGGGT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102647940 2603 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I a score=807362.000000 s hg38.chr19_GL949747v2_alt 75152 271 + 729520 GACTCACAGAGGGTCAGCAGCTGGAGGATCAGCACCAGGGCCATGGTGGGCAGATACCCGCTAG------AGCTGGAGCCAGGGCTTGGTCGCACCCTCTCCCCTCCCAGGAAATGAGGCAACATCAGAAAACCAGACCCAGATC-----CTCATTTACGGAAGAGAGTATCGAGGTGGGGGCCTGTGGGTGACTGTGTCATAGCCCTATGGCACTGTGGAAAAA-TTAGCAGGGGGTTCAGTCATAACCTGTGGTGTTCATTTATTTAACTCTAGAAACAAA s panTro4.chr19 59008615 258 + 63644993 GACTCACAGAGGGTCAGCAGCTGGAGGATCAGCACCAGGGCCATGGTGGGCAGACACCCGCTAG------AGCTGGAGCCAGGGCTTGGTCGCACCCTCTCCCCTCCCAGGAAATGAGGCAACATCAGAAAACCAGACCCAGATC-----CTCGTTTACGGAAGAGAGTATCGAGGTGGGGGCCTGTGGGTGACTGTGTCA-------------CTGTGGAAAAA-TTAGCAGGGGGTTCAGTCATAACCTGTGGTGTTCATTAATTTAACTCTAGAAACAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55886628 277 + 60714840 GACTCACAGAGGGTCAGCAGCTGGAGGATCAGTACCAGGGCCATGGTGGGCAAATGTTCGCTGG------AGCTGGAGCCAGGGCTTGGTCGCACCCTCTCCCCTCCCAGGAAATGAGGCAACATCAGAAAGCCAGACCCAGACCAGATACTCGTTTAGGGAAGAGAGTATCGAGGTGGGGGCCTGTGGGTGACTGTGTCATAGTCCTGTGGCACTGTGGAAAAAGTTAGCAGGGGGGTCAGTCATAACCTGTGGTGTTCATTAATTTAACTCTAGAAACAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102650544 272 - 106955855 GGCTCACAGAGGGTCAGCAGCTGGAGGATCAGCATCAAGGCCATGGTGGGCAGCTATCCGCTGG------AGCTGGAGCCAGGGCTTGGTCGCACCCTCTTCCCTCCCAGGAAATGAGGCAACATCAGAAAGCCAGACCCAGATA-----CTCGTTTAGGGAAGTGAGTATCGAGGTGGGGGCCTGTGGGTGACTGTGTCATAGCCCTATGGCCCTGTGGAAAAAGTTAGCAGGGGGGTCAGTCATAACCTGTGGTGTTCATTCATTTAACTCTAGAAACAAA i nomLeu3.chr10 M 2603 C 0 s rheMac3.chr19 59934534 272 + 64156825 AGCTCACAGAGGGTCAGCAGCTGGAGGATCAGCACCAGGGCCATGGTAGGCAGATATCTGCTGG------AGCTGGAATCAGGGCTTGGTTGCATCCTCTCCCCTCCCAGGAAATGAGGAAACATCAGAAAGCCAGACCCAGATC-----GTCGTTTAGGGAAGAGAGGATCGAGGTGGGGGCCTGTGGGTGACTGTGTCATAGCCCTATAGCGCTGTGGAAAAGGTTAGCAGGGGGGTCAGTCATAACCTGTGGTGTTCATTAATTTAACTCTAGAAACAAA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47071976 272 + 51301725 GGCTCACAGAGGGTCAGCAGCTGGAGGATCAGCACCAGGGCCATGGTAGGCAGATATCTGCTGG------AGCTGGAGTCAGGGCTTGGTTgcatcctctcccctcccaggaaatgaggaaacatcagaaagCCAGACCCAGATG-----GTCGTTTAGGGAAGAGGGGATCGAGGTGGGGGCCTGTGGGTGACTGTGTCATAGCCCTATAGCGCTGTGGAAAAGGTTAGCAGGGGGGTCAGTCATAACCTGTGGTGTTCATTAATTTAACTCTAGAAACAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46777254 272 + 50890351 GGCTCACAGAGGGTCAGCAGCTGGAGGATCAGCACCAGGGCCATGGTAGGCAGATATCTGCTGG------AGCTGGAATCAGGGCTTGGTTGCATCCTCTCCCCTCCCAGGAAATGAGGAAACATCAGAAAGCCAGACCCAGATC-----GTTGTTTAGGGAAGAGAGGATCGAGGTGGGGGCCTGTGGGTGACTGTGTCATAGCCCTATAGTGCTGTGGAAAAGGTTAGCAGGGGGGTCAGTCATAACCTGTGGTGTTCATTAATTTAACTCTAGAAACAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45345161 262 + 49145316 AGCTCACAGACGGTCAGCAGCTGGAGGATCAGCACCAGGGCCATGGTGGGCAGATATCC-CTGC------AGCTGCTGCCAGAGCTTGGCTG-------TTCCCTCCCAGGAAATGAGGCAACATCAGAAAGCCAGACCCAGAGC-----CCAGTTTAGGAAAGAGA--AGCGAGGTGGGGGCCTATGGGTCACTGTGTCATAGCCCCATGGCACCGTGGAAAAAGTTAGCAGGGGGGTCAGTCATAACCTGTGGTGTTCATTAATTTAGCTCTAGAAACAAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3616033 255 + 145441459 AGCTCACAGAGAGTCGACAGCTGGAGTATCAGCGACAGGACCATGGTGGGCA-CTCTCCG-TGG------AGCTGAGGAAAAGG-TTGACCCTGCCTTTTTCACTCTGAGGAAATGAAGCAACACCAGAAAGCCATG-TGAGAGT-----CCTGTTTAGGGAACAGAGGAGTCAGGTGGAGGCTCCTGGGTAACTGTGTCATAGTTTCATTG--TCTTGGAAAAAGTTGCAAGATGGAACAGTCATAGCCTCTGGTGTTCTTTAATTTAACT----------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19576923 269 - 122678785 GGCTCACAGAGGATCAGCAGCTCAAGGATCAGCGCCAGAGCCATGGTGGTCAGATCTTGGCTGGAGCAGAAGCAGGAGCCAGGGCTCAGCCGTGCCCTCTCACTTCTCAGGAAAT---GCAATACCAGAAAGCCAGA------GC-----TCTGTTTAAGGAAGGGAGGAGGGAAGTGGGGGCCTCTGGGTGACTGTGTCACAGCCCCATGGTGCTGTGGAAAAGCCTGGGAGATGGGGCAGTCATAACCAGTTGTGTTCACTAATTAAACTTAAAAAAAAAA i canFam3.chr1 C 0 I 167 e macFas5.chr19 54942282 1 + 59248254 I a score=142386.000000 s hg38.chr19_GL949747v2_alt 75423 75 + 729520 TActagtcaggaggtggaggcaggagga-----tcgcttgagcccaagagt-----tcaagagcagcctgggcaacagagcgaga s panTro4.chr19 59008873 75 + 63644993 TACTAGtcgggaggtggaggcaggagga-----tcgcttgagcccaagagt-----tcaagagcagcctgggcaacacagcgaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55886905 75 + 60714840 TActagtcggaaggtggaggcaggagga-----tcgcttgagcccaagagt-----tcaaaagcagcctgggcaacacagcgaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102650816 75 - 106955855 TACTAGtcgggaggtggaggcaggagga-----tcgcttgagcccaagagt-----tcaagagcagcctgggcaacacagcaaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59934806 67 + 64156825 TActagtcgggaggcggaggcaggagta-----tcgcttgagcccaagagt-----tcaagagcaggttgg--------gcggga i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47072248 67 + 51301725 TACTagtcaggaggcggaggcaggagga-----tcgcttgagcccaagagt-----tcaagagcagcttgg--------gcgaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46777526 67 + 50890351 TActagtcgggaggcggaggcaggagga-----tcgcttgagccccagagt-----tcaagagcagcttgg--------gcgaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45345423 60 + 49145316 TACTCAttgggaggtggagatgggagga-----tcgcttgagtccaggagt-----tcaa---------------catggcgaga i calJac3.chr22 C 0 C 0 s mm10.chr7 3616288 82 + 145441459 TAAAAGTTGG--GGAGGAGGGCTGAGGACGTTGTCGC-TAAGTAGAAGACCACTTGCCCAGAGTAGCCTCAGCACTGaggagaga i mm10.chr7 C 0 I 915 e canFam3.chr1 19577192 167 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=23730.000000 s hg38.chr19_GL949747v2_alt 75498 10 + 729520 ccctgtct-aa s panTro4.chr19 59008948 10 + 63644993 ccctgtct-aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55886980 10 + 60714840 ccctgtct-aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102650891 11 - 106955855 ccctgtctaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59934873 10 + 64156825 ccctgtct-aa i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47072315 10 + 51301725 ccctgtct-aa i papAnu2.chr19 C 0 M 348 s chlSab2.chr6 46777593 10 + 50890351 ccctgtct-aa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45345483 10 + 49145316 ccctgtct-aa i calJac3.chr22 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=151803.000000 s hg38.chr19_GL949747v2_alt 75508 101 + 729520 aaaataaataaat----tgtgccactgcactccagcctgggtgatagagtgagaccatgtctttaaaT----atagatagacagatagaaagataTCTGTC-----TGTTTTAA s panTro4.chr19 59008958 105 + 63644993 aaaataaataaataaattgtgccactgcactccagcctgggtgatagagtgagaccatgtctttaaaT----ATAGATAGACAGACAGACAGAAAGATATC-----TGTTTTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55886990 110 + 60714840 aaaataaataaataaattgtgccactgcactccagcctgggtgatagagtgagaccatgtctttaaaT----ATAGATAGACAGACAGATAGAAAGATATCTGTCTTGTTTTAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102650902 106 - 106955855 aaaataaataaataaattgtgccactgcactctagcctgggtgatagagtgagaccatgtctttaaaT----ATAGATAGACAGACAGAAAGATATCTGTC----TTGTTTTAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59934883 99 + 64156825 aaaataaataaat----tttgccaccacactccagcctgggtgatagagtgagaccatgtcttcaaaT----ACAGACAGACAGACAGAAAGATATCTGTT-------TTTTAA i rheMac3.chr19 C 0 I 31 s chlSab2.chr6 46777603 103 + 50890351 aaaataaataaat----tgtgccaccacactccagcctgggtgatagagtgagaccatgtcttcaaatacagacagacagacagacagaaagaTATCTGTT-------TTTTAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45345493 99 + 49145316 --aaaaaaaaaaT----TGTGCAACATCGCTCCAGCCTGAGTGATAGAGTGAGACCATGTCTTTAAAT----ATAGACAGACAGACAGAAAGATATCTGTC-----TGTTTTAA i calJac3.chr22 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e papAnu2.chr19 47072325 348 + 51301725 M e macFas5.chr19 54942282 1 + 59248254 I a score=189487.000000 s hg38.chr19_GL949747v2_alt 75609 101 + 729520 AAATAAGAACCTATTATGTGCCAGACTCTTGCTGTCATTGATTGACAGATAGataaaaa-------tttgcacctattatgtgccaggcccttgctgTGATTGAAaga s panTro4.chr19 59009063 101 + 63644993 AAATAAGAACCTATTATGTGCCAGACTCTTGCTGtcattgattgacagatagataaaaa-------ttcgcacctattatgtgccaggcccttgctgTGATTGAAaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887100 101 + 60714840 AAATAAGAACCTATTATGTGCCAGACTCTTGCTGTGATTGATTGACAGATAGataaaaa-------ttagcacctattatgtgccaggcccttgctgTGATTGAAaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102651008 101 - 106955855 AAATAAGAACCGAATATGTGCCAGACTCTTGCTGTGATTGATTGACAGATAGataaaaa-------ttagcacctattatgtgccaggcccttgctgTgatagataga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59935013 97 + 64156825 AAAAAAGAACCTATTATGTGCCAGACTCTTGCTG----TGATTGATTGATAGAAAAAAA-------TTAGCACCTATTATGTGCCAGACCCTTGCTGTGATTGAAAGA i rheMac3.chr19 I 31 I 249 s papAnu2.chr19 47072673 97 + 51301725 aaattagcatctattatgtgccaggcctttgcta----tgatagatagatagataaaaa-------ttaGCACCTGTTAAGTGCCAGGCCCTTGCtgtgattgattga i papAnu2.chr19 M 348 C 0 s chlSab2.chr6 46777706 99 + 50890351 -----AAAACCTATTATGTGCCAGACCCTTGCTG----TGATTGAAAGAAAAAAAGAaaaaaaaatttagcatctattatgtgccaggcccttgctgTgataaataga i chlSab2.chr6 C 0 I 7 s calJac3.chr22 45345592 93 + 49145316 AAATAAGAACCTATAATATGCCAGACTATTGCTG----TGattgattgat----aaaaa-------ttagcacctatcatgtgccaggcccttgctgTgattgataga i calJac3.chr22 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=-595.000000 s hg38.chr19_GL949747v2_alt 75710 34 + 729520 tagatagatggatg--------------------------------gatggatagatagatagata s panTro4.chr19 59009164 34 + 63644993 tagatagatggata--------------------------------gatagatagatagatagata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887201 18 + 60714840 ta------------------------------------------------gatagatagatagata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102651109 22 - 106955855 tagata--------------------------------------------gataggtagatagata i nomLeu3.chr10 C 0 I 36 s papAnu2.chr19 47072770 6 + 51301725 ------------------------------------------------------------tagata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46777812 66 + 50890351 tagatagataAAAATTagcatctattatgtgccaggcccttgctgTGATAGATAGACAGATAGATA i chlSab2.chr6 I 7 I 36 s calJac3.chr22 45345685 5 + 49145316 ------------------------------------------------------------tagat- i calJac3.chr22 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59935110 249 + 64156825 I a score=346188.000000 s hg38.chr19_GL949747v2_alt 75744 245 + 729520 gatagatagatagataAAAATTAGCACCTGTTAAGTGCCAGGCCCTTGCTGTGATTGATTGATGGAT------------A--------------------------------------------GATAAAAATTAACACCAA-TTATGTGCCAGGCCCTTGCTGtgattaattgatcgattgatagattggttgaCAG--AGAAAAATTAGCACCTATTATGTGCCAGGCTCTTGGTGTGATACTGTG----------------Ttagatagatagatagatagatagatagatagatagatagat-aAAAATTAGCCCCT s panTro4.chr19 59009198 237 + 63644993 gatagatagatagataAAAATTAGCACCTGTTAAGTGCCAGGCCCTTGCTGTGATTGATTGATGGAT------------A--------------------------------------------GATTAAAATTAACACCAA-TTATGTTCCAGGCCCTTGCTGtgattaattgatcgattgatagattggttgaCAG--AGAAAAATTagcacctattatgtgccaggctcttgctgTGATACTGTg------------------------atagatagatagatagatagatagatagatagat-aAAAATTAGCCCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887219 250 + 60714840 gatagatagatagataAAAATTagcacctattaagtgccaggcccttgctgTGATTGATTGATGGAT------------A--------------------------------------------GATAAAAATTAACACCAA------------GCCCTTGCTGTGATTAATTGATCAATTGATAGATTGGTTGACAG--ataaaaattagcacctattatgtgccaggctcttgctgtgatactgTgattgattgatagatagatagatagatagatagatagatagatagatagatagatagat-aAAAATTAGCACCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102651167 265 - 106955855 GATAGATAGATAGATAAAAATTAGCACCTATTAAGTGCCAGGCCCTTGCTGTGATTGATTGATAGAT------------AAGAATTAGCACCTATTAAGTGTCAGACCCTTGCTGTGATTGATGGATAGATAAAAACACCAA-TTATGTGCCAGTCCCTTGCTGTAattaattgatcgattgatagattggttgaCAG--ataaaaattagcacctattatgtgccaggctcttgctgTGATACTGTG----------------------------------------ATTGATTGATTGATTGAT-AAAAAGTAGCACCT i nomLeu3.chr10 I 36 C 0 s rheMac3.chr19 59935359 212 + 64156825 GATAGATAGATAGATAAAAATTAGCACCTGTTAAGTGCCAGGCCCTTG-TGTGATTGATTGAT----------------A--------------------------------------------GATAAAAATTAACACCAA-TTACGTGCCAGGCCCTTGCTGTGATTAATTGATC----GATAGATTGGTTGACAG--ataaaaattagcacctattatgtgccaggctcttgctgTGATACTGtg----------------------------------------attgattgattgattgat-tAAAATTAGCACCT i rheMac3.chr19 I 249 C 0 s papAnu2.chr19 47072776 144 + 51301725 -----------------aaATTAACACCAATTACGTGCCAGGCCCTTGCTGTGATTAATTGATCGATAGATTGGTTGACA--------------------------------------------GATAAAAAttagcaccta-ttatgtgccaggctcttGCTGTGATActgtgatt------------------------------------------------------------------------------------------------------------------gattgattgattgat-taaaaTTAGCACCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46777914 213 + 50890351 GATAGATAGATAGATACAAATTAGCACCTGTTAAGTGCCAGGCCCTTGCTGTGATTGATTGAT----------------A--------------------------------------------GATAAAAATTAACACCAA-TTACGTGCCAGGCCCTTGCTGTGATTAATTGATC----GATAGATTGGTTGACAG--ATAAAAATTagcacctattatgtgccaggctcttgctgTGATACTGTG----------------------------------------ATTGATTGattgattgat-taaaattagcacct i chlSab2.chr6 I 36 C 0 s calJac3.chr22 45345690 231 + 49145316 gatagataaatagataAAAATTAGTGCCTATTAAGTGCCAGGCCCTTGCTGTGATTGATTGAC----------------A--------------------------------------------GATAAAAATGAGCACCAATTTATGTGGCAGGC-CTTGTTGTGATTGATTGATCGATTGATAAAATGATTGACAGGCATAAAAATTAGCACCTATTATGTACCAGGCCCTTGCTGTGATACTGTG----------------------------ATAGATAGATGGAT-GATTGATTGATAGATAAAAAATTCGCACCT i calJac3.chr22 C 0 I 71 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=467916.000000 s hg38.chr19_GL949747v2_alt 75989 279 + 729520 CTAggccgggcgcggttgttcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcacctgagatcgggaagttcgagaccagcctgaccaacatggagaaacccccgtctctcctaaaaa-agaaaaattagccggctgtggaggcgcgcgcctgtaatcccagctattcaggaggctgaggcaggagaatcgcttgaactcgggagtcggaggttgctgtgagccgagatcgcgccattgcactccagcctgggcgacagagctagact s panTro4.chr19 59009435 280 + 63644993 CTAggccgggcgcggttgctcacgcctgtaatcccagcactttgggaggccaaggcaggtggatcacctgaggtcgggaagttcgagaccagcctgaccaacatggagaaacccccgtctctcctaaaaacagaaaaattagtcgggtgtggaggcgcgcgcctgtaatcccagctattcaggaggctgaggcaggagaatcgcttgaactcgggagtcagaggttgctgtgagccgagatcgcgccattgcacttcagcctgggcgacagagctagact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887469 279 + 60714840 ATAggctgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggatcacctgaggtcgggaagttccagaccagcctgaccaacgtggagaaa-ccccgtctctactaaacatagaaaaattagccgggtgtggaggcgcgcacctgtaatcccagcgattcaggaggctgaggcaggagaatcgcttgaacccgggagttggaggttgctgtaagccgagataacaccattgcactccagcctgggggacagagctagact i ponAbe2.chr19 C 0 I 25 s nomLeu3.chr10 102651432 279 - 106955855 ATAggccgggcacggtggctcacgcctgtaatcctagcactttgggaggccgaggggggcggatcacctgaggtcgggaagttcgagaccagcctgaccaacatggagaaa-ccccatctctactaaaaatagaaaaattagctgggtgtggaggcacgcgcctgtaatcccagctattcaggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgctgtgagccgagatcgcgccattgcactccagcctgggcaacagagctagact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59935571 269 + 64156825 ATAggccgggctcggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggatcacctgagggcgggaagttggagaccagcctgaccaacatggagaaa-ccccgtctttactaaaaatagaaaaattagcctggtgtgtaggcgcgcgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaaccccggaggcggaggttgctgtgagccgagatcgtgccagtgcactccagcctgggggact---------- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47072920 267 + 51301725 ATAGgccggg--cggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggatcacctgaggtcgggaagttggagaccagcctgaccaacatggagaaa-ccccgtctttactaaaaatagaaaaattagcctggtgtggaggcgcgcgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaaccccggaggcggaggttgctgtgagccgagatcgcgccagtgcactccagcctgggcgact---------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778127 269 + 50890351 ataggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggattacctgaggtagggaagttggagactagcctgaccaacatggagaaa-ccccgtctttactaaaaatagaaaaattagcctggtgtggaggcgcgcgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaaccccggaggcggaggttgcagtgagccgagatcgcgccagtgcactccagcctgggcgact---------- i chlSab2.chr6 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e calJac3.chr22 45345921 71 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=25798.000000 s hg38.chr19_GL949747v2_alt 76268 21 + 729520 caatctcagaagaaaaaaaaa s panTro4.chr19 59009715 21 + 63644993 caatctcagaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102651711 21 - 106955855 cagtctcaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 M 520 s rheMac3.chr19 59935840 21 + 64156825 cagtctcaggaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073187 21 + 51301725 cagtctcagaaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778396 21 + 50890351 cagtctcagaaagaaaaaaaa i chlSab2.chr6 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e calJac3.chr22 45345921 71 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=93320.000000 s hg38.chr19_GL949747v2_alt 76289 112 + 729520 aa-----aaTTAGAACCTATTACGTGCCAGACCCTCGCtgtgccatgttggcaggcacagagggaactcagactccgttactgctctcaagcagcagctaccagtccgactgaaaga s panTro4.chr19 59009736 117 + 63644993 aagaaaaaaTTAGCACCTATTACGTGCCAGACCCTCGCtgtgccatgttggcaggcacagagggaactcagactccgttactgctctcaagcagcagctaccagtccgactgaaaga i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59935861 112 + 64156825 -----aaGATTagcacctattacgtggcagaccctcgctgtgcgatgttggcaggcacagagggcactcagactccattactgctctcaagcagctgctaccagtccgactgacaga i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073208 111 + 51301725 -----aagattagcaccTATTACGTGGCAGACCCTCGCTGTGCGATGTTGGCAGGCACAGAGGGAACTCAGACT-CGTTACTGCTCTCAAGCAGCTGCTACCAGTCCGACTGACAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778417 112 + 50890351 -----aagattaggacctattacgtggcagaccctcgctgtgcgatgttggcaggcacagagggaactcagactccgttactgctctcaagcagctgctaccagtccgactgacaga i chlSab2.chr6 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e calJac3.chr22 45345921 71 + 49145316 I e nomLeu3.chr10 102651732 520 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I a score=4927.000000 s hg38.chr19_GL949747v2_alt 76401 57 + 729520 ccaagaccaggtcagtttcctttttttttgagacggagtctcgctctgtcgcccagg s panTro4.chr19 59009853 56 + 63644993 ccaagaccaggtcagtttc-tttttttttgagacggagtctcgctctgtcgcccagg i panTro4.chr19 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e calJac3.chr22 45345921 71 + 49145316 I e nomLeu3.chr10 102651732 520 - 106955855 M e chlSab2.chr6 46778529 0 + 50890351 C e papAnu2.chr19 47073319 0 + 51301725 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59935973 0 + 64156825 C a score=68100.000000 s hg38.chr19_GL949747v2_alt 76458 252 + 729520 ctggagtgcagtggtgtgatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgccttagcctccccagtagctgggactacgggcgcccaccaccacgcccggctaatttgtgttgtatttttaagtagagacagggtttcaccatgttagccaggatggtctagatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgccc s panTro4.chr19 59009909 252 + 63644993 ctggagtgcagtggtgtgatctctgctcactgcaagctccgcctccggggttcacgccattctcctgccttagcctccccagtagctgggactacgggcgcccaccaccacgcccggctaatttgtgttgtatttttaagtagagacagggtttcaccatgttagccaggatggtctagatctcctgatctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652253 252 - 106955855 ctggagtgcagtggtgtgatctctgctcactgcaagctccgccttccgggttcacgccattctcctgcctcagcctccccagtagctgggactacagtcgcccaccaccactcccggctaatttgtgttgtatttgtaagtacagacagggtttcaccatgttagccaggatggtctagatctcctgaccttgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccacggctccc i nomLeu3.chr10 M 520 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e calJac3.chr22 45345921 71 + 49145316 I e chlSab2.chr6 46778529 0 + 50890351 C e papAnu2.chr19 47073319 0 + 51301725 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59935973 0 + 64156825 C a score=807.000000 s hg38.chr19_GL949747v2_alt 76710 2 + 729520 gg s panTro4.chr19 59010161 2 + 63644993 gg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652505 2 - 106955855 gg i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45345992 2 + 49145316 ga i calJac3.chr22 I 71 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e chlSab2.chr6 46778529 0 + 50890351 C e papAnu2.chr19 47073319 0 + 51301725 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59935973 0 + 64156825 C a score=57113.000000 s hg38.chr19_GL949747v2_alt 76712 31 + 729520 cccagaccaggtcagtttcttaagtgatctg s panTro4.chr19 59010163 31 + 63644993 cccagaccagatcagtttcttaagtgatctg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652507 31 - 106955855 ccCAGACCAGGTCAGTTTCttaagtgatctg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59935973 31 + 64156825 cccagaccaggtcagtttcttcagtgatctg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073319 31 + 51301725 CCCAGACCAGGTCAGTTTCTTAAGTGATCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778529 31 + 50890351 cccagaccaggtcagtttcttaagtgatctg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45345994 31 + 49145316 ctcagaccaggtcagtttgttcagtgatctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e macFas5.chr19 54942282 1 + 59248254 I a score=563141.000000 s hg38.chr19_GL949747v2_alt 76743 265 + 729520 agctataatggcggtaaca--gagcactgtgagagcccgcagaaagctcctaacccatctgggatgagacctagcgcttccaggacgagccgatgttgagctgaga--cctcgaaggacaggttagtcattcaccttctcccgggctcagtttcttcgtctgtaaaatgggCTTTCATACATAAACTATAAAATGGGGACTATTTTGTTCCGCCTTAGGTGGGTCGCAGCAGGAGGACTAG-----TCACTCCGGAGCGACTTCTAGGCTGAGA s panTro4.chr19 59010194 265 + 63644993 agctataatggcggtaaca--gagcactgtgagagcccgcagaaagctcctaacccatctgggatgagacctagcgcttccaggacgagccgatgttgagctgaga--cctcgaaggacaggttagtcattcaccttctcccgggctcagtttcttcgtctgtaaaatgggCTTTCATACATAAACTATAAAATGGGGACTATTTTGTTCCGCCTTAGGTGGGTCGCAGCAGGAGGACTAG-----TCACTCCGGAGCGACTTCTAGGCTGAGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652538 261 - 106955855 agctataatggcggtaaca--gggcact----tagcccgcagaaagctcctaacccatctgggatgagacctagcgcttccaggacgagctgatgttgagctgaga--cctcgaaggacaggttagtcattcaccttctcccaggctcagtttcttcgtctgtaaaatgggCTTTCATACATAAACTATAAAATGAGGACTATTTTGTTCTGCCTTAGGTGGGTCGCAGCAGGAGGACTAG-----TCACTCCGGAGCGACTTCTAGGCTGAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59936004 264 + 64156825 agctacactggcggtaaca--gggcactgtgagagcccgcagaaagctcctaacccatctgggatgagacctagcgcttccaggacgagctgatgttgagctgaga--cctcgaaggaAAggttagtcattcaccttctcccgggctcagtttcttcatctgtaaaatgggCTTTCATACATAAACTATAAAATGAGGATTATTTTGTTCCGCCTTAGGT-GGTCTCAGTAGGAGGACTAG-----TCACCCCGGAGCGACTTCTAGGCAGAGA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073350 264 + 51301725 AGCTATAATGGCGGTAACA--GGGCACTGTGAGAGCCCGCAGAAAGCTCCTAACCCATCTGGGATGAGACCTAGCGCTTCCAGGACGAGCTGATGTTGAGCTGAGA--CCTCGAAGGAAAGGTTAGTCATTCACCTTCTCCcgggctcagtttcttcatctgtaaaatgggctttcATACATAAACTATAAAATGAGGACTATTTTGTTCCGCCTTAGGT-GGTCTCAGTAGGAGGACTAG-----TCACCCCGGAGCGACTTCTAGGCAGAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778560 264 + 50890351 agctatactggcggtaaca--gggcactgtgagagcccgcagaaagctcctaacccatctgggatgagacctagcgcttccaggacgagctgatgttgagctgaga--cctcaaaggaAAggttagtcattcaccttctcccgggctcagtttcttcatctgtaaaatgggCTTTTATACATAAACTATAAAATGAGGACTATTTTGTTCCTCCTTAGGT-GGTCTCAGTAGGAGGTCTAG-----TCACCGCAGAACGACTTCTAGGCAGAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45346025 264 + 49145316 agccatactggcggttaca--gggcactgtgagagcccacagaaggctcctaagccatctgcgatgagacctagcgcttccaggatgagctgatcttgagctgagaggcctcaaagggcaggttaatcattcaccttctcccgggctcagtttcttcatctgtaaaatgggCTTTCATGCATAAACTATAAAATGGGAACTATTTTGTTCTGCCTTAAGTGGATCGCAGCAGGA---CCAG-----TCACTCCGGACCGACTTCAAGGCTGAGA i calJac3.chr22 C 0 I 386 s canFam3.chr1 19577359 271 - 122678785 agctaca-tggaggtcacatgtggcactgagagagtccacagaaggcccctaaccctcctgggatgagacttaaagcttccaggatgaactgattttgagctgaga--cctcaaaggatagctaagttatctgtcctctcccagcctccgcttcttcatctgtgaaatgggCTTTCATGAGTCAACTCTAAAATGAGGACTATTGCATTCCGCCTTGGATGAGTCGCAGCTGCAGGACTGGGAGTACTCCTCAGGCACGACTCCTAGGCGGAGA i canFam3.chr1 I 167 C 0 e mm10.chr7 3616370 915 + 145441459 I e ponAbe2.chr19 55887748 25 + 60714840 I e macFas5.chr19 54942282 1 + 59248254 I a score=750.000000 s hg38.chr19_GL949747v2_alt 77008 1 + 729520 C s panTro4.chr19 59010459 1 + 63644993 C i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652799 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59936268 1 + 64156825 C i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073614 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778824 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19577630 1 - 122678785 C i canFam3.chr1 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e ponAbe2.chr19 55887748 25 + 60714840 I e calJac3.chr22 45346289 386 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=222584.000000 s hg38.chr19_GL949747v2_alt 77009 135 + 729520 TAAGGAGATTC-CACGCAGGTCCGCAAAGTCAGGCTTGCGCTTGCTCCTGACACCACTTCC-TTTACCTCCACGGCTCC--ATCTTTGTTCTGCGCGAGTGCGCACGCGCAGGCTCCGAAAGCGGGCCGTCGCACAGAG s panTro4.chr19 59010460 135 + 63644993 TAAGGAGATTC-CACGCAGGTCCGCAAAGTCAGGCTTGCGCTTGCTCCTGACACCACTTCC-TTTACCTCCACGGCTCC--ATCTTTGTTCTGCGCGAGTGCGCACGCGCAGGCTCCGAAAGCGGGCCGTCGCCCAGAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652800 136 - 106955855 TAAGGAGGTTC-CACGCAGGTCCGCAAAGTCAGGCTTACGCTTGCTCCTGACACTACTTCCTTTTACCTCCACGGCTCC--ATCTTTGTTCTGCGCAAGTGCGCACGCGCAGGCTCCGAAAGCGGAACCTCGCACAGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59936269 133 + 64156825 TAAGGAGATTC-CACGCAGGTCCGCAAAGTCAGGCTTGCGCTTGCTCTTGGCACTACTTCC-TTTACCTCTGCTGCTCG--ATCTTTGTTCTGCGCTAGTGCGCACGCGCAGACTCCGAAAGCGGTACCTTGCACGG-- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073615 135 + 51301725 TAAGGAGATTC-CACGCAGGTCCGCAAAGTCAGGCTTGCGCTTGCTCCTGGCACTACTTCC-TTTACCTCCGCGGCTCC--ATCTTTGTTCTGCGCTAGTGCGCACGCGCAGAAGCCGAAAGCGGTACCTTGCACAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778825 135 + 50890351 TAAGGAGATTC-CACGCAGGTCCGCAAAGCCAGGCTTGCGCTTGCTCTTGGTACTACTTCG-TTTACCTCGGCGGCTCC--ATCTTTGTTCTGCGCTAGTGCGCACGCGCAGACTCCGACAGCGGTACCTTGCACAGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45346675 133 + 49145316 TAAGGAGATCC-CACGCAGGTGCGCAAA--CAGGATTGCGCTTGCTCCCGGGACCACGTCC-TTTACCACCGCTGCCTC--ATCTTGGTTCTGCGCTAGTGCGCACGCGCAGACTCTGACAGCAGCGCCTCGCGCAGAG i calJac3.chr22 I 386 C 0 s canFam3.chr1 19577631 110 - 122678785 -----AGATTTGCACTTAAATTCGCAGTGC--------CGCCTGCT------------TTC-TTTGCC---GCGGATTCTGACAGTTGTCCTGCTCCAGTGCGCGCGTGCGGACTCAGGCTGCGGGGGCTCGAGCGCGG i canFam3.chr1 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e ponAbe2.chr19 55887748 25 + 60714840 I e macFas5.chr19 54942282 1 + 59248254 I a score=1139465.000000 s hg38.chr19_GL949747v2_alt 77144 537 + 729520 GGACCACAACTCCCAGAGTGCTCCGCGTCCTTGCTTTCGCCTC------TACTTGTGCTCCAGGGCGCACGCGCAGCCCTGGGAGCGGGTTCTCGCGC----ATAGGGACCACAACTCCCAGGGTGCTCCGCGTCCT------CGCCGCTGTCGCCGCCGCGGAGACAAAGATGGCTGCGAGTAAGTGCAGGTTCCGGTGGCGCACGGGGCTCGGGTAGTTCTGGGAACCTCTGGGCGGTCCTGGGACTGAGGTGCGGCAGGGCAGGGGTGGAAGCGATGGGGTCCGTGCTGGAG-GGGAACGCAGAAGTCACGAGGGGGCTCCTCCAGGGCAGGGGTGGCACGAGAGGGTTAGAGGTCACCGGGGGCAGCTACTTGCAGGGGTGACGCTTCTTG-CCACCCCTTCAGGAGTCGGCGCCTTCCTCAAGAATGCCTGGGACAAGGAGCCAGTGCTGGTCGTGTCCTTCGTCGTCGGGGGCCTCGGTGCGTGAGTGCT--CCAGGCGCAAACTTGCATCGTCCA-----CCC-----------CCGTCCCCCTACATCCCTCCATCTTGTACCCC s panTro4.chr19 59010595 537 + 63644993 GGACCACAACTCCCAGAGTGCTCCGCGTCCTGGCTTTCGCCTC------TACTTCTGCTCCAGGGCGCACGCGCAGCCCGGGGAGCGGGTTCTCGCGC----ACAGGGACCACAACTCCCAGGGTGCTCCGCGTCCT------CGCCGCTGTCGCCGCCGCCGAGACCAAGATGGCTGCGAGTAAGTGCAGGTGCCGGTGGCGCGCGGGGCTCGGGTAGTTCTGGGAACCTCTGGGCGGTCCTGGGACTGAGGTGCGGCAGGGCAGGGGTGGAAGCGATGGGGTCCGTGCTGGAG-GGGGACGCAGAAGTCACGAGGGGGCTCCTCCAGGGCAGGGGTGGCACGAGAGGGTTAGAGGTCACCGGGGGCAGCTACTTGCAGGGGTGACGCTCCTTG-CCACCCCTTCAGGAGTCGGCGCCTTCCTCAAGAATGCCTGGGACAAGGAGCCAGTGCTGGTCGTGTCCTTCGTCGTCGGGGGCCTCGGTGCGTGAGTGCT--CCAGGCGCAAACTTGCATCGTCCA-----CAC-----------CCGTCCCCCTACATCCCTCCATCTTGTACCCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652936 537 - 106955855 GGACCACAACTCCCAGAGTGCTCCGCGTCCTGGCTTTTTCCTC------CACTTCTGCTCCAGGGCGCACGCGCAGCCCGGGGAGCGGTTTCTCGCGC----ATAAGGACCACAACTCCCAGAGTGCTCCGCGTCCT------CGCCGCTGTCGCCGCCGCCGAGACCAAGATGGCTGCGAGTAAGTGCAGGTGCCGGTGGCGCGCGGGGCTCGGGTAGTTTCGGGAACCTCCGGGCGGTCCGGGGACTGAGGTGCGTCAGGGCAGGGGTGGAAGCGATGGGGTCCGTGCTGGAG-GGGGACGCAGAAGTCACGAGGGGGCTCCTCCAGGGCAGGGGTGGCACGAGAGGGTTAGAGGTCACCGGGGGCAGCTACTTGCAGGGGTGACGCTCCTCG-CCACCCCTTCAGGAGTCGGCGCCTTCCTCAAGAATGCCTGGGACAAGGAGCCAGTGCTGGTCGTGTCCTTCGTCGTCGGGGGCCTCGGTGCGTGAGTGCT--CTAGGCGCAAACTTGCATCGTCCA-----CCC-----------CCGTCTCCCTCCATCCCTCCATCTTGTACCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59936402 433 + 64156825 --------------------------------------------------------------------------------------------------------AGGGACCACAACTCCCAGAGTGCTCCGCGTCCT------CGCCGGTGTCGCCGCC---GAGACCAAGATGGCTGCGAGTAA------GTGCCGGTGGCGCGCGGGGCTC-GGTGGTACCGGGAACCTCCGGGCGGTCCTGGGACTGAGGTGCGGCAGGGCAGTGGTGGAGGCGATGGGGTCCGTGCTGGAG-GGGGACGCAGAAGTCACGAGGGGGCTCCTCCAGGGCAGGGGTGGCACGAGAGGGTTAGAGGTCACGGGGGGCAGCCACTTGCAGGGGTGACTCTCCTCG-CCACCCCTTCAGGACTCGGCGCCTTCCTCAAGAATGCCTGGGACAAGGAGCCAGTGCTGGTCGCGTCCTTTGTCATCGGGGGCCTCGGTGCGTGAGTGCT--TCAGGCGCAAACTTGCATCGTCCA-----CCC-----------CCGTCCCCCTACATCCCTCCATCTTGTACCTC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073750 527 + 51301725 GGACCACAACTCCCAGAGTGCTCCGCGTCCTGGCTTTCTTGTC------CACTTCTGCTCCAGGGCGCACGCGCAACCCGGGGAGGGGTTTCTCGCGC----GTAGGGACCACAACTCCCAGAGTGCTCCGCGTCCT------CGCAGGTGTCGCCGCC---GAGACCAAGATGGCTGCGAGTAA------GTGCCGGTGGCGCGCGGGGCTC-GGTGGTACCGGGAACCTCCGGGCGGTCCTGGGACTGAGGTGCGGCAGGGCAGTGGTGGAGGCGATGGGGTCCATGCTGGAG-GGGGACGCAGAAGTCACGAGGGGGCTCCTCCAGGGCAGGGGTGGCACGAGAGGGTTAGAGGTCACGGGGGGCAGCCACTTGCAGGGGTGACCCTCCTCG-CCACCCCTTCAGGACTCGGCGCCTTCCTTAAGAATGCCTGGGACAAGGAGCCAGTGCTGGTCGCGTCCTTCGTCATCGGGGGCGTCGGTGCGTGAGTGCT--TCAGGCGCAAACTTGCATCGTCCA-----CCC-----------CCGTCCCCCTACATCCCTCCATCTTGTACCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778960 533 + 50890351 GGACCACAACTCCCAGAGTGCTCCGCGTCCTGGCTTTCGCCTC------CACTTCTGCTTCAGGGCGCACGCGCAACCCGGGGAGGGGTTTCTCGCGC----ATAGGGACCACAACTCCCAGAGTGCCCCGCGTCCT------CGCCGGTGTCGCCGCC---GAGACCAAGATGGCTGCCAGTAAGTGCAGGTGCCGGTGGCGCGGGGGGCTC-GGTGGTACCGGGAACCTCCGGGCAGTCCTGGGACTGAGGTGCGGCAGGGCAGTGGTGGAGGCGATGGGGTCCGTGCTGGAG-GGGGACGCAGAAGTCACGAGGGGGCTCCTCCAGGGCAGGGGTGGCACGAGAGGATTAGAGGTCACGGGGCGCAGCCACTTGCAGGGGTGACCCTCCTCG-CCACCCCTTCAGGACTCGGCGCCTTCCTCAAGAATGTCTGGGACAAGGAGCCAGTGCTGGTCGCGTCCTTCGTCATCGGGGGCATCGGTGCGTGAGTGCT--TCAGGCGCAAACTTGCATCGTCCA-----CCC-----------CCGTCCCCCTACATCCCTCCATCTTGTACCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45346808 518 + 49145316 GGACCACAACTCCCAGGGTGCTCCGCGTCCTGGCTTTCGCCTC------CACCTCTGCTCCAGGACGCGCGCGCGACCAGGGGAG-----TCTCGCGC------AGAGACCACAACTTCCAGAGTGCTTCGCGTGCT------CTCCGGTGTCGCCGCCGCCGAGACCAAGATGGCCGCAAGTAAGTGCAGGTGTCGGTGGCGCGCGGGGCTC----------GGGAATCTCCAGGCGGTCCTGGGACTAAGGTGTAGTGGGAAAGTGGTGGAGGCGATGTGGTCCGTGCTGGAG-GGGGAGGCAGAAGCTACGAGGGGGCTCCTCCAGGGCA-GGGTGGCACGAGAGGGTTAGAGGTCACTGGGGGCAGCCCCTTGCAGGGGTGACCCTCCTCG-CCACTCCTGCAGGACTCGGCGCCTTCCTCAAGAATGCTTGGGCCAAGGAGCCAGTACTGGTCGTGTCCTTCTTCATCGGGACCCTCGGTGCGTGAGT-CT--CCAGGCGCAAACTTGCATCATCCA-----CCC-----------CTGTCCCTCCACATCGCTCCATCTTGTACCCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3617285 491 + 145441459 GAACTACAACTCCCGAAAGGGTCCACGTCCTCG-------------------------------------------CCCAAGGGGCGGGGCCTCACGCAAGGAGAAGGACCACAACTCCCAGAGAGCTCCGC-TCCT------------TGTCGCCGCC---AAGAACAAGATGGCCGGGAGTAAGTACAGGTTT--GGAGCTCGCGGGGATCAAGTAGTTCCAGGAAACTGTGGGCTGATCCGTGGCTGAGTCTCAGTGGAGCCTTGGGGACCG----GTAATCCGTCCCAGAATAGGGGCGCGGCAGTCACGAGGGTG------CAGAGCAGGGGTGATACGAGAGTGTTAGAGGTCACC----GCAGTAGTCCCCAAGGGTGACTGTCTTC--TCACCTCTCTAGGAATCTCTGCCTTCCTCAAGAATGCCTGGGCGAAGGAGCCGGTGCTGGTGGTGTCCTTCTCTGTCTGGGGCCTCGGTGAGTGCCCCCTTCCCCGGCGCGAAAGTGCATCCTCCA-----CCCGGAAGTCATCAGCATTCCACGGCACAGTTTCATCTCGCATCCC i mm10.chr7 I 915 I 1422 s canFam3.chr1 19577741 541 - 122678785 GGACCACAACTCCCAGAGTGCTTCGCGTCCTCGCCACAGCCCCGGGCCGCAGTTCTGTGCCAGTGCGCATGCGCA-CTCAGATTGCGGAGCCTCGGGC----GCGGGAACCACAATTCCCAGAGTGCTCCGGCCGCTTgctgccgccgccgccgccgccgccgAGACCAAGATGGCCGGGAGTAAGTGAGGGCGCCCGCGGCGCGCTGGGTCC-GCTGGTTCCCGGAGCCCC--GGTGGTGCCGGTGCTGGGGCACGGCGGAGCCTCCGTGCAGGCGGTGGGGGCAGGGCCACAG-GGGGGCGCCGAGATCACGAGAGGGCTCCTCCGGGGCGGGGGTGGCGCGAGAGGGTTAGAGGTCACCGGAGGC-GTCCCCTGCAGGAATGACCCTCCTCGCCCTCCCCTCCAGGACTCGCCGCCTTCCTCAAGGATGCCTGGGCCAAAGAGCCGGTGCTGGTCGCGTCCTTCACCATCGGGGGCCTCGGTGCGTGAGCGTG--C--AGCGC-------CCTCACCCAAGGTCCCG-----------TCGCTCCCCACTAGCGCTCTGCCCTGTACCCT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55887748 25 + 60714840 I e macFas5.chr19 54942282 1 + 59248254 I a score=74006.000000 s hg38.chr19_GL949747v2_alt 77681 48 + 729520 TAAAGCCCTATCGCCGCCCTCGGGTCCCCTCTAGTGTGTCTGCACCCC s panTro4.chr19 59011132 48 + 63644993 TAAAGCCCTATCGCCGCCCTCGGGTCCCCTCTAGTGTGTCTGCACCCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102653473 48 - 106955855 TAAAGCCCTATCGCCGCCCTCGGGTCCCCTCTAGTGTGTCTGCACCCC i nomLeu3.chr10 C 0 I 1335 s rheMac3.chr19 59936835 48 + 64156825 TAAAGCCCTGTCGCCTCCCTCGGCTCCCCTCCAGTGTGTCTGCACCCC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47074277 48 + 51301725 TAAAGCCCTGTCGCCTCCCTCGGCTCCCCTCCAGTGTGTCTGCACCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46779493 48 + 50890351 TAAAGCCCTGTCGCCTCCCTCGGCTCCCCTCCAGTGTGTCTGCACCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45347326 23 + 49145316 -AAAGCCCTATCGCCGTCCTCGAG------------------------ i calJac3.chr22 C 0 C 0 s canFam3.chr1 19578282 35 - 122678785 -----------CAACGTTCTAGGGCCCCCTC--GTGTGTCTGCACCCC i canFam3.chr1 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e ponAbe2.chr19 55887748 25 + 60714840 I e macFas5.chr19 54942282 1 + 59248254 I a score=411484.000000 s hg38.chr19_GL949747v2_alt 77729 356 + 729520 CACGGCATCCCCTTATCTATCCCCATACCCATTATAACCTCTCCACCATCGCCCCCCGCGT------TCC----TCTCCACCTACCCAATACGCTCTTAACCCCTCTAAATGAGACgttctcaaccctgcttatgcctt---aacacctgagcaccaaaaa-aaagtccagatcctcc---tcctccttttcatctttcctctc------ccccattctgaatt--gagttggcttgggtggaggtgggactggggaatctgtgtcttgtg-aaaatccccgtatgatcccaatgt---gccttgctgattgaaaatctctgCCCTCTGCCCTGGAACTGCCCTACTCACACTTTAATTAGCACCGGAGTTCC-TG--CAGGGATGGG s panTro4.chr19 59011180 349 + 63644993 CACGGCATCCCCTTATCTATCCCCATACCCATTATAACCTCTCCACCATCGCCCCCCGCGT------TCC----TCTCCACCTACCCAATACGCTCTTAACCCCTCTAAATGAGACgttctcaaccctgcttatgcctt---aacacctgagcaccaaaaa-aaagtccagatcctcc---tcctccttttcatctttcctctc------ccccattctgaatt--gagttggcttgggtggaggtgggactggggaatctgtgtcttgtg-aaaatccccgtatgatcccaatgt---gccttgctgattgaaaat-------ctctgCCCTGGAACTGCGCTACTCACACTTTAATTAGCACCGGAGTTCC-TG--TAGGGATGGG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59936883 360 + 64156825 CGCGACATCCCCTTGTCTATCCCCATACCCATTATAACGCCTCCACCG---CCCCCCGCAT------TCC----TCTCCCCCTACCCAATACGCTCTTAACCCCTCTAAATGAGACgttctcaatcctgcttatgcattagcaacacctgagcaccaaaaataaagtccagatcctcc---ttctccctttcatctcccctctc------ccacattctgaatt--gagttggtttggttggtggtggggctgggaaatctgtgtcttgtg-aaaatccccctatgatcctaatgtgtcgtcttgctgattgaaaaccTCAGCCCTCTGCCCTGGAACTGTGCTGCTTACACCTTAATTAGCACCGCAGTCCC-TG--CACGGATGGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47074325 349 + 51301725 CACGAC------------ATCCCCATACCCATTATAACGTCCCCACCGc--ccccccGCAT------TCC----TCTCCCCCTACCCAATACGCTCTTAATCCCTCTAAATGAGACGTTCTCAACCCTGCTTATGCGTTAGCAACACCTGAGCACCAAAAATAAAGTCCagatcctcc---tcctccctttcatCTCCCCTCTC------CCACATTCTGAATT--GAGTTGGTTTGGTTGGTGGTGGGGCTGGGGAATCTGTGTCTTGAG-AAAATCCCCCTATGATCCTAATGTGTCGTCTTGCTGATTGAAAACCTCAGCCCTCTGCCCTGGAACTGTGCTACTCACACCTTAATTAGCACCGCAGTTCC-TG--CAGGGatggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46779541 360 + 50890351 CACGACATCCCCTTGTCTATCCCCATACCCATTATAACGTCTCCACCG---CCCCCCGCAT------TCC----TCTCCCCCTACCCAATACGCTCTTAACCCCTCTAAATGAGACgttctcaaccctgcttatgcattagcaacacctgagcaccaaaaataaagtccagatcctcc---tcctccctttcatctcccctctc------ccacattctgaatt--tagttggcttggttggaggtggggctggggaatctgtgtcttgtg-aaaatccccctatgatcctaatgtgtcgtcttgctgattgaaaaccTCAGCCCTCTACCCTGGAACTGTGCTACTCACACCTTAATTAGCACCGCAGTTCC-TG--CAGGGATGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45347349 344 + 49145316 -------TCCCCTTGTCTATCCCCATACCCTTTGTAACCTCTCCACCATC-GCCCCCGCGT------TCC----TCTCCATCTACCCAACACGCTCTTAACCCCCCTAAATGAGACGTTCTCAACCCTACTTATGCATC---AACACCTGAGCACCAAAAATAAAGTCCAGATCCTCCTCTTCCTCCCTTTCAGCTCCCCTCTC------C--Tattctgaatt--gaattggcttggctggaggttgggctggggaatctgcgtcttgtgaaaaatccccctattatcctaacgt---gccttccaga-tgaaaac-------ctttgTTGTGGAACTCTGCTGTTCACATTTTAATTAGCACCGGAGTTCCTTG--TAGGGGTGGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19578317 320 - 122678785 -------------------GCCCCACCCCCACTATTAGGACCACCCTGTACACACCTACCTGGGAGGTCCATGACCCTCCCCCACCCCACCCACCC-----CACCCTCAGGGCGAggttctcagccctggctgtgcatt-----------------aaaaacacGGTCAGAATCCTACCACTCCTCACCCTTgcccccccccccgccccgccccACACTAAGCTTGGAGTGGGGTGGGGTGGAGGTGGGGCTGGGGAATCTCCG----GTG-AAAAGCCTCTTCCGCGCT---------GCCTT---GACTGACAGC-------TTCTGTTCTAGAGCAGGGCTGCTCAGACTTTAAC--GTGCGGGAGGTCT-TGTTCAAGGGCAGG i canFam3.chr1 C 0 I 307 e mm10.chr7 3617776 1422 + 145441459 I e ponAbe2.chr19 55887748 25 + 60714840 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=149268.000000 s hg38.chr19_GL949747v2_alt 78085 164 + 729520 GGCGGGGGATTGTTAAAATGTAGC------------------ttttttttttgcgatggagtctca--ctctcacccaggctgaagtgcagtggcgcgatcccggctcactgcaacctcggcctcctgggttcaagggattctcctgcctcagcctcccgagtagctgggattacaggcgcCCA s panTro4.chr19 59011529 182 + 63644993 GGCGGGGGATTGTTAAAATGTAGCGCttttttttttttttttttttttttttgcgatggagtctca--ctctcacccaggctgaagtgcagtggcgcgatcccggctcactgcaacctcggcctcctgggttcaagggattctcctgcctcagcctcccgagtagctgggattacaggcgcCCA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59937243 160 + 64156825 GCC------------------------tttttgtttgtttggtttttttttggagacagagtctcgccctgtcacccaggctgatgtgcagtgaggcgatcccagctcactgcaaactcagcctcccgggttcaagggattcccctgcctcagcctctcgagtagctggggctacaggcgccca i rheMac3.chr19 C 0 I 158 s papAnu2.chr19 47074674 148 + 51301725 gcc------------------------ttttt----------ttttttcttggagatggagtctca--ctgtcacccgggctgatgtgcagtgacgcgatcccggctcactgcaaactcagcctcccgggttcgagggattcccctgcctcagcctctcgagtagctgggagtacaggcgccca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46779901 155 + 50890351 GCC------------------------tttttttttttt---tctttttttggagatggagtctca--ctgtcacccaggctgatgtgcagtgacgcgatcccagctcactgcaaactcagcctcccgggatcaagggattcccctgcctcagcttctggaatagctgggactacaggcgccca i chlSab2.chr6 C 0 I 160 s calJac3.chr22 45347693 176 + 49145316 GGCGGGGGATTGTTAAAATGTAGtttgtttttggtttttcttttttcttttggaaacatagtctta--ctgtcactcaggctga-----aatgacgccat-ctggctcactgcaacctccgcttcctgggttcaagggatttttctgcctcagcctcctgagtagctgggatgacagacacCCA i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=56234.000000 s hg38.chr19_GL949747v2_alt 78249 289 + 729520 GCTAAttttttgtttttgtttt--------------tgagactgagtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggttcagtgcaagccccgccttccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgcccccatgcccggctaattttttgtatgttcaatagagacggggtttcaccgtgttagccaggatggtctcgatctcctaacctc--gtgatcctcccaactcggtctcccaaagtgctgggattacaggcgtgag s panTro4.chr19 59011711 289 + 63644993 GCTAAttttttgtttttgtttt--------------tgagactgagtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggttcactgcaagccccgccttccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgcccccatgcccggctaattttttgtatgttcaatagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctc--gtgatcctcccaactcggcctcccaaagtgctgggattacaggcgtgag i panTro4.chr19 C 0 C 0 s calJac3.chr22 45347869 292 + 49145316 TCTAATTttttctttctttctttttttttattttcctgctatgcagtttccctctgtcttccaggctggagtgcagtggcatgatctcggctcactgcaacctctgcctttggggttcaagtgattctcctatctcagccttttgagtaagtgagattacaggcactca---ccacgtctggctaatttttt-tatttttagtagagacaggatttcgccatgttggccaggctggtctggaactcctgacctcaagtgatccac---------tttcccaaagtgctgagattataggcatgag i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e nomLeu3.chr10 102653521 1335 - 106955855 I e chlSab2.chr6 46780056 160 + 50890351 I e papAnu2.chr19 47074822 0 + 51301725 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59937403 158 + 64156825 I a score=5755.000000 s hg38.chr19_GL949747v2_alt 78538 17 + 729520 ccaccgcgcccggccAG s panTro4.chr19 59012000 17 + 63644993 tcaccatgcccggccAG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47074822 17 + 51301725 ccaccacgcctggctaa i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45348161 17 + 49145316 ccactgggccaagccag i calJac3.chr22 C 0 I 1353 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e nomLeu3.chr10 102653521 1335 - 106955855 I e chlSab2.chr6 46780056 160 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59937403 158 + 64156825 I a score=4450.000000 s hg38.chr19_GL949747v2_alt 78555 42 + 729520 Cttttttttttttttttttttgagatggcgtctcgctctgtc s panTro4.chr19 59012017 37 + 63644993 C-----tttttttttttttttgagatggcatctcgctctgtc i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47074839 40 + 51301725 t--ttttttgtatttttagtagagacagggtttcgccgtgtt i papAnu2.chr19 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e calJac3.chr22 45348178 1353 + 49145316 I e nomLeu3.chr10 102653521 1335 - 106955855 I e chlSab2.chr6 46780056 160 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59937403 158 + 64156825 I a score=27544.000000 s hg38.chr19_GL949747v2_alt 78597 103 + 729520 ttccaggctacagtgcaatggtttgatcatggctcactgcaacctccgcctctagggttcaagtgattctcctgcctccgcctcccaagta---------------------gctgggattaca s panTro4.chr19 59012054 103 + 63644993 ttccaggctagagtgcaatggtttgatcatggctcactgcaacctccgcctccagggttcaagtgattctcctgcctccgccacccaagca---------------------gctgggattata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887773 103 + 60714840 ttccaggctagagtgcaatggtttgatcatggctcactgtaacctccgcttacagggttcaagtgattttcctccctcagcctcccaagta---------------------gctgggattaca i ponAbe2.chr19 I 25 C 0 s papAnu2.chr19 47074879 91 + 51301725 -----agccaggatg----gtcttgatc--------tcctgacctc----------------gtgatccgccctcctctgcctcccaagtgctgggtgGGCCACTGCTCacccctgggattaca i papAnu2.chr19 C 0 I 5 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e calJac3.chr22 45348178 1353 + 49145316 I e nomLeu3.chr10 102653521 1335 - 106955855 I e chlSab2.chr6 46780056 160 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59937403 158 + 64156825 I a score=4123.000000 s hg38.chr19_GL949747v2_alt 78700 7 + 729520 ggcgagc s panTro4.chr19 59012157 7 + 63644993 ggcgagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887876 7 + 60714840 ggcgggc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59937561 7 + 64156825 ggcaagt i rheMac3.chr19 I 158 C 0 s papAnu2.chr19 47074975 7 + 51301725 ggcacgt i papAnu2.chr19 I 5 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e calJac3.chr22 45348178 1353 + 49145316 I e nomLeu3.chr10 102653521 1335 - 106955855 I e chlSab2.chr6 46780056 160 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I a score=924732.000000 s hg38.chr19_GL949747v2_alt 78707 752 + 729520 accaccacgcccggctaatttttgtatttttagtagagacaaggtttcaccatgttggccaggctggtcttg-aactcctg-accgcaagtgatctgccttcccaaagtgct-gggattacaggggtg-agccactgcgcccggccaaactgtaggttct-gattctgtaggtctgggg-tggggcatgggattctgcatttttgaagagttcccaggtcttgtcagtactgctggtccaccagccaGGCACTAGGTTAAGGTTCTGAACACTtattcagtatggcagccaccagccacaactggccactgagcatttgaagtggtgctggtatgaattgaggtggtataagac--actggatttcaaaaacttagtataacagagtgtgtaaactaccaataatcttttgttgattacatggcgaagtgatgttttggatgtactatggttttttttgttt---gtttgtttttgtttttttgagacggagtttcgcttttgtccaggctagagtgcaatggcctgatctcggctcactgcaacctccgcctcccgggttcaagcgattctcctgtctcagcctccttagtagctgggattacaggcgcatgccactacacctggct--gtttttgtattttcagtagagacggggtttcatcatattggtcaggctggtctcgaactcctgacctcaggtgatccacccgtctcagcctcctaaagtcctgggattataggcatgagccacctcgcccatcca s panTro4.chr19 59012164 755 + 63644993 accaccacgcccggctaatttttgtatttttagtagagacgaggtttcaccatgttggccaggctggtcttg-aactcctg-accgcaagtgatctgccttcccaaagtgct-gggattacaggggtg-agccactgcgcccggccaaactgtaggttct-gattctgtaggtctgagg-tggggcatgggattctgcatttttgaagagttcccaggtcttgtcagtactgctggtccaccagccaGGCACTAGGTTAAGGTTCTGAACACTtattcagtatggcagccaccaaccacacctggccactgagcatttgaagtggtgctggtatgaattgaggtggtgtaagac--actggatttcaaaaacttagtataacagagtgtataaactaccaataatcttttgttgattacatgtcgaagtgatgttttggatgtactatggtTttttttttttttggtttgtttttgtttttttgagacggagtttcgcttttgtccaggctagagtgcaatggcctgatctcggctcactgcaacctccgcctcccgggttcaagcgattctcctgtctcagcctccttagtagctgggattacaggcgcatgccactacacccggct--gtttttgtatttttagtagagacggggtttcatcatattggtcaggctggtctcgaactcctgacctcaagtgatccacccgtctcagcctcctaaagtcctgggattataggcatgagccacctcgcccatcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887883 759 + 60714840 accaccacgcccggctaatttttgtatttttagtagagacagggtttcaccgtgttggccaggctggtcttgaaactcctgaaccgcaagtgatctgccttcccaaagtgctggggattacaggggtgaagccactgcgcctggccaaactgtaggttct-gattctgtaggtctggggatggggcatgggattctgcattttttaagagttcccaggtcttgtcagtactgctggcccaccagccaGGCACTAGG-TAAGGTTCTGAACACTtgttcagtatggcagccaccagccacatgtggccactgagcacttgaagtggggctggtatgaattaaggtggtataagac--actggatttcaaaaactcagtataacagagtgtgtaaactaccaataatcttttgttgattacatgttgaagtgatgttttggatgtaccatgttttttttttttt--ggtttggttttgtttttttgagacggaatttcacttttgtccaggctagagtgcaatggcctgatctcggctcactgcaacctccgcctcccgggttcaagcgattctcctgtctcagcctccttagtagctgggattacaggcgcatgccactacacccggctaagtttttgtatttttagtagagatggggtttcatcatattggtcaggctggtctcgaactcctgacttcaggtgatccacccgtctcggcctcctaaagtcctgggattataggcatgagctacctcgcccatcca i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59937568 751 + 64156825 accaccacgcctggctaatttttgtgtttttagtagagatgaagtttcaccatgttgttcaggctggtcttg-aactcctg-accgcaagtgatccgctttcccaaagtact-gggattactggagtg-agccactgcgcccggccaaactgtgggttctcgattctgtaggtctggga-tggggcatgggattctgcatttttgaagagttgccaggtcttgtcagtactgttggtccgccagccaGGCACTAGG-TAAGGTTCTGAACACTtgttcgatctggcagccaccagccacacctggccactgagcacttgaaatgaggctggtatgcattgaggtggtataagacatactggatttcaaacacttagtataactaagtatgtaaactaccaatcgtcttttgttgattacatgttgaagtgatg-tttggatataccatggtttttttt------ggtctgtttttgtttttttgagacggagttttactttcgtctaggctggagtgcaatggcctgatctcaactcactgcaacctctgcctcccggggtcaagcgattctcctgtctcagcctcctgggtagctgggattacaggtgcacgccactacacc-agctaattttttgtatttttagtagagacagggtttcatcacattggtcaggctggtctcgaactcctgatctcaggtgatccacccgcctcagcctcctaaaatcctgggattacaggcgttagccacctcacccagcca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47074982 750 + 51301725 gccaccacgcctggctaatttttgtatttttagtagagatgaagtttcaccatgttgttcaggctggtcttg-aactcctg-accgcaagtgatccgctttcccaaagtact-ggggttaccggagtg-agccactgcgcccggccaaactgtgggttct-gattctgtaggtctgggg-tggggcatGGGATTCTGCATTTTTGAAGAGTTGCCAGGTCTTGTAAGTACTGTTGGTCCACCAGCCAGGCACTAGG-TAAGGTTCTGAACGCTTGTTCAATCTGGCAGCCACCAGCCATACCTGGCCACTGAGCACTTGAAGTGAGGCTGGTATGAATTGAGGTGGTATAAGACACACTGGATTTCAAACACTTAGTATAACTAAGTGTGTAAACTACCAGTCGTCTTttgttgattacatgttgaagtGATG-TTTGGATATACCATggtttttttt------ggtctgtttttgtttttttgagacggagttttactttcgtctaggctggagtgcaatggcctgatctcaactcactgcaacctctgcctcccgggttcaagcgattctcctgtctcagcctcctgggtagctgggattacaggcgcacgccactacact-ggctaatcttttgtatttttagtagagacagggtttcatcacattggtcaggctggtctcgaactcctgacctcaggtgatccacctgcctcggcctcctaaaatcttgggattacaggcgttagccacctcacccagcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46780216 751 + 50890351 accaccacgcctggctaatttttgtatttttagtagagatgaagtttcactatgttgttcaggctggtcttg-aactcctg-accgcaagtgatccgctttcccaaagtact-gggattaccggagtg-agccactgcgcctggccaaactgtgggttct-gattctgtaggtctgggg-tggggcatgggattctgcatttttgaagagttgccaggtcttgtcagtactgttggtccaccagccaGGCACTAGG-TAAGGTTCTGAACACTtgttcgatctggcagccaccagccacacctggccactgagcacttgaagtgaggctggtatgaattgaggtggtataagacacactggatttcaaacacctagtataactaagtgtgtaaactaccaatcgtcttttgttgattacatgttgaagtcatg-tttggatataccatgggttttttt------ggtctgtttttgtttttttgagacggagttttgctttcgtctaggctggagtgcgatgacctgatctcaactcactgcaacctctgcctcccaggttcaagcgattctcctgtctcagcctcctgggtagctgggattacaggcgcatgccaccacacctggctaattttttgtatttttagtagagacagggtttcatcacattggtcaggctggtctcgaactcctgacctcaggtgatccacctgcctcggcctcctaaaatcttgggattacaggcgttagccacctcacccagcca i chlSab2.chr6 I 160 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e calJac3.chr22 45348178 1353 + 49145316 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=13755.000000 s hg38.chr19_GL949747v2_alt 79459 7 + 729520 agtatgt s panTro4.chr19 59012919 7 + 63644993 agtatgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55888642 7 + 60714840 agtatgt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59938319 7 + 64156825 agtatgt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47075732 7 + 51301725 agtatgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46780967 7 + 50890351 agtatgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45349531 7 + 49145316 agtatgt i calJac3.chr22 I 1353 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=372991.000000 s hg38.chr19_GL949747v2_alt 79466 206 + 729520 ttcttaaaatttgtttcatctgtatctcttatttttactgtagctactagaagatataaaattatatacctggctcttac-catctgtcagacagcactgGCCTAGAACATTCCTTTTATGAACTG----TACCCCATCCCCCAGGACTCCTGGCTCCCACC-------------------------------------------------CTAAATGGACTGTG----GTCAGTGACTGTTGTTTGTGCAACCCTTTCTCCTC s panTro4.chr19 59012926 202 + 63644993 ttcttaaaatttgtttcatctgtatcttttatttttactgtggctactagaagatataaaattatatacctggctcTTAC-CATCTGT----CAGCACTGGCCTAGAACATTCCTTTTATGAACTG----TACCCCATCCCCCAGGACTCCTGGCTCCCACC-------------------------------------------------CTAAATGGACTGTG----GTCAGTGACTGTTGTTTGTGCAACCCTTTCTCCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55888649 206 + 60714840 ttcttaaaatttgttttatctgtatcttttatttttactgtggctactagaagatataaaattatatacctggctcttac-catctgtcagacagcactgGCCTAGAACATTCCTTTTATGAACTG----TACCCCATCCCCCAGGATTCCTGGCTCCCACT-------------------------------------------------CTAGATGGACTGTG----GTCAGTGACTGTTGTTTGTGCAACCCTTTCTCCTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59938326 208 + 64156825 ttcttaaaatttgtttcatctatatc--tcatttttactgtggctactaaaagatataaaattatatacctgggtcttac-catctgtcagacagtgctgGCCTAGAACATTCTTCTTATGCACTG----TACCCCATCCCCCGGGACTCCTGGCTCCCACC-------------------------------------------------CTAGATGGACTGTGACTTGTCAGTGACTGTTGTTTGTCCAAACCTTTCTTCTC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47075739 208 + 51301725 ttcttaaaatttgtttcatCTATATC--TTATTTTTACTGTGGCTACtagaagatataaaattatatacctGGCTCTTAC-CATCTGTCAGATAGTGCTGGCCTAGAACATTCTTCTTATGCACTG----TACCCCATCCCCTGGGACTCCTGGCTCCCACC-------------------------------------------------CTAGATGGACTGTGACCTGTCAGTGACTGTTGTTTGTGCAAACCTTTCTCCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46780974 204 + 50890351 ttcttaaaatttgttttatctgtatc--ttatttttactgtgcctactagaagatataaaattatatacctggctcTTAC-CATCTGTC----AGTGCTGGCCTAGAACATTCTTCTTATGCACTG----TACCCCATCCCCCGGGACTCCTGGCTCCCACC-------------------------------------------------CTAGGTGGACTGTGACCTGTCAGTGACTGTTGTTTGTGCAAACCTTTCTCCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45349538 250 + 49145316 ttcttaaaatttgtttcatctgtatcttttatttt---------tactagaagatacaaaattatatacctggctcTTAC-CATCTGTCAGACCTTTCGGGCCTAGAACAATCCTTTTATGTACTG----TGCCCCGTCCCCCAGGACTCTTGGCTCCCACTGAGTGGACTGTGACTCCTTAGTGGCTGTTCTTTGGACTCTTGGCTCCCACTGAGTGGACTGTGACCCCTTAGTGGCTGTTGTTTGTACAACCCTTTCTCCTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19578944 196 - 122678785 tttttaaaa----actcatttgtatcttttattttta-tgtgcctgttagaaggtgtgaaactaaatatgtggctcttatgtttctgctggacagtgctgGCCTAGAACATTCTTTTTACCCCCCACCCCTGCCCTACTCCCTGAGACTCCTGGTGCCCACC-------------------------------------------------CTAGGTGGACTGTGATTTCTGAG--------------ACAACCCTTCCTTTCC i canFam3.chr1 I 307 I 4 e mm10.chr7 3617776 1422 + 145441459 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=22779.000000 s hg38.chr19_GL949747v2_alt 79672 16 + 729520 CAGTTTGTAAGGCttt s panTro4.chr19 59013128 16 + 63644993 CAGTTTGTAAGtcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55888855 16 + 60714840 CAGTTTGTAAGtcttt i ponAbe2.chr19 C 0 I 686 s rheMac3.chr19 59938534 16 + 64156825 CAGTTTGTAACAGTTT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47075947 16 + 51301725 CAGTTTGTAACAGTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781178 16 + 50890351 CAGTTTGTAACAGttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45349788 16 + 49145316 CAGTTTGTAACAGtct i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19579140 4 - 122678785 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=1179.000000 s hg38.chr19_GL949747v2_alt 79688 1 + 729520 t s panTro4.chr19 59013144 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55889557 1 + 60714840 t i ponAbe2.chr19 I 686 C 0 s rheMac3.chr19 59938550 1 + 64156825 T i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47075963 1 + 51301725 T i papAnu2.chr19 C 0 I 21 s chlSab2.chr6 46781194 1 + 50890351 t i chlSab2.chr6 C 0 I 5 s calJac3.chr22 45349804 1 + 49145316 c i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19579140 4 - 122678785 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=21417.000000 s hg38.chr19_GL949747v2_alt 79689 13 + 729520 tttttttttt---ttt s panTro4.chr19 59013145 13 + 63644993 tttttttttt---ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55889558 13 + 60714840 tttttttttt---ttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59938551 12 + 64156825 -TTTTTTTTT---TTT i rheMac3.chr19 C 0 I 661 s macFas5.chr19 54942283 15 + 59248254 -tttctttttgggttt i macFas5.chr19 I 1 I 1 s papAnu2.chr19 47075985 12 + 51301725 -ttttttttt---ttt i papAnu2.chr19 I 21 C 0 s chlSab2.chr6 46781200 9 + 50890351 -ttttttttt------ i chlSab2.chr6 I 5 I 3 s calJac3.chr22 45349805 13 + 49145316 tttttttttt---ttt i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19579140 4 - 122678785 I e nomLeu3.chr10 102653521 1335 - 106955855 I a score=438068.000000 s hg38.chr19_GL949747v2_alt 79702 286 + 729520 tttggtgatggagtctctctctgttgcccaggctggagtgcaatggcacaatctgggctcactgcaacctctgcctcccaggctcaagggattcttctgcctcagcctcctgagtagctgggattacaggctcctgccaccacgcccggctaattttcgtatctttagtagagatggggtttcat----catgttgtccaggctggtcgcgaactcctgacctcaggtgatccgcccacattggccgcccaaagtgctgggattacaggcttgagccactgtgcccggcc s panTro4.chr19 59013158 282 + 63644993 ----gtgatggagtctctctctgttgcccgggctggagtgcaatggcacaatctgggctcactgcaacctctgcctcccaggctcaagggattcttctgcctcagcctcccgagtagctgggattacagcctcctgccaccacgcccggctaatttttgtatctttagtagagatggggtttcat----catgttgtccaggctggtcgcgaactcctgacctcaggtgatccgcccacattggccgcccaaagtgctgggattacaggcgtgagccactgtgcccggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55889571 286 + 60714840 tttggggacggagtctctctctgttgcccaggctggagtgcaatggcacaatctgggcttactgcaacctctgcctcccaggttcaagggattcttctgcctcagcctcctgagtagctgggattacaggcttctgccaccacacccggctaatttttgtgcctttagtagagatggggtttcat----cacgttgtccaggttggttgtgaactcctgacctcaggtgatctgcccaccttggcctcccaaagtgctgggattacaggtgtgagccacggtgcccagcc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54942299 284 + 59248254 --tttagacagagtctcactctgtcgcccaggctggagtgcaatggcgcaatatcagctcactgcaacctctgcctcctgggttcaagtgattctcctgccttagcctcccgagtagctgggattacaggcgcccactaccatgcccagcaaatttttgcatttttagtagagtcagggtttcac----tatattggccaggctggtctccaactcctgacctcaggtgatctgcctgccttatcctcccaaagtgctgggattacaggcatgagccactgtgcctggcc i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47075997 282 + 51301725 ttttgcgacagagt----ctctgttgcccaggccagagtgcagtggcacaatgtgggctcactgcaacctctgcctcccaggctcaagggattctcctgcctcagcctgctgaggagctgagattacaggctcctgccgccatgccaggctaatttttgtatctttagtagagatggggattcat----catgttgtccaggctggtcgtgaactcctgacctcaggtgatctgcccacctttgcctcccaaagtgctgggattacaggcatgagccactgtgcctggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781212 282 + 50890351 gtttgcgacagagt----ctctgttgcccaggctggagtgcagtggcacaatgtgggctcactgcaacctctgcctcccaggctcaagggattctcctgcctcagcctgctgaggagctgagattacaggctcctgccgccatgcccggctaatttttgtatctttagtagagatggggattcat----catgttgtccaggctggtcgtgaactcctgacctcaggtgatctgcccacctttgcctcccaaagtgctgggattacaggcatgagccactgtgcctggcc i chlSab2.chr6 I 3 C 0 s calJac3.chr22 45349818 280 + 49145316 ---tgagatggaat----ctgtgtcacccaggctggagtgcagtggcacgatctgggctcactgcagcctcaacctcccaggctcaaggg--tctcctgcctcagcctcctgaatagctgggattataggcgcc-accaccacatgcagctaattttttagtttttagtagagatggggtttcattcaccatgttggtcaggcaggtctcgaactcctgacctcaggtgatctgcccaccttgggctctcaaagcactgggattacaggcgtgagccaccgcgtccagcc i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19579140 4 - 122678785 I e nomLeu3.chr10 102653521 1335 - 106955855 I e rheMac3.chr19 59938563 661 + 64156825 I a score=5096.000000 s hg38.chr19_GL949747v2_alt 79988 3 + 729520 AAA s panTro4.chr19 59013440 3 + 63644993 AAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55889857 3 + 60714840 AAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102654856 3 - 106955855 AAA i nomLeu3.chr10 I 1335 C 0 s macFas5.chr19 54942583 3 + 59248254 AAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076279 3 + 51301725 aaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781494 3 + 50890351 AAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350098 1 + 49145316 --G i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19579140 4 - 122678785 I e rheMac3.chr19 59938563 661 + 64156825 I a score=205892.000000 s hg38.chr19_GL949747v2_alt 79991 113 + 729520 TTTGTAACAG-TCTTGATTTCTCCAGAACAGTCCCATGACACTA-CCCCCA---------GGATGCTCCATGATGA-CCCTACACTCAA-ACGTGCTCATTCCATGACCAACCCCACTGCTGCCTC- s panTro4.chr19 59013443 113 + 63644993 TTTGTAACAG-TCTTGATTTCTCCAGAATAGTCCCATGACACTA-CCCCCA---------GGATGCTCCATGATGA-CCCTACACTCAA-ACGTGCTCATTCCATGACCAACCCCACTGCTGCCTC- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55889860 112 + 60714840 TTTGTAACAG-TCTTGATTTCTCCAGAATA-CCCCATGACACTACCCCCCA---------GGATGCTCCATGATGACCCCTACACTCAA-AC-TGCCCATT-CACAAACAACCCCACCGCTGCCTC- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102654859 114 - 106955855 TTTGTAACAG-TCTTGATTTCTCCGGAATAGTCCCATGACACTA-CTGCCA---------GGATGCTCCATGATGACCCCTACACTTAT-ACGCACTCATTCCATGACCAACCCCACTGCTCCCTC- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54942586 115 + 59248254 TGTGTAACAG-TCTTAATTTCTCCAGAATAGTCCCATGACACTA-CCCACA---------GGATGCTCCATGATGACCCCTACACTCAAAACGTACTCATTCCACGACCAACCCCAGTGCTTCCTC- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076282 115 + 51301725 tgtgTAACAG-TCTTAATTTCTCCAGAATAGTCCCATGACACTA-CCCACA---------GGATGCTCCATGATGACCCCTACACTCAAAACGTACTCATTCCACGACCAACCCCAGTGCTTCCTC- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781497 80 + 50890351 TGTGTAACAG-TCTTAATTT---------------------------------------------CTCCATGATGACCCCTGCACTCAATATGTACTCATTCCACAACCAACCCCAGTGCTTCCTC- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350099 107 + 49145316 TTTGTAACAA-TCTTGATTTCTAAGGAACAGTCCCATGACACCA-CCCCCA---------GGATGCTCCGTGATGAACGCTA--------ATGCACTCATTCCATGACCAACCCCACTGCTCCCTC- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19579144 123 - 122678785 TTTGTAACAGTTCATGATTCCACTGGAAGATCCCCAAACCATTC-CTCTCACCCACTACCTTGTGCTCCCTGACCACCTCTACACTC---ATGCCCTCATTCTGTGACCACCCCCATGTCTTCCCTC i canFam3.chr1 I 4 C 0 e mm10.chr7 3617776 1422 + 145441459 I e rheMac3.chr19 59938563 661 + 64156825 I a score=98133.000000 s hg38.chr19_GL949747v2_alt 80104 47 + 729520 ---------CTCCAGGCCCCACGTATCTGTGAGTGTTAGGCTCCAACCCCTA------CCTC s panTro4.chr19 59013556 47 + 63644993 ---------CTCTAGGCCCCACGTATCTGTGAGTGTTAGCCTCCCACCCCTA------CCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55889972 45 + 60714840 ---------CTCTA-GCCCCATGTATCTGTGAACGTGAGGCTCC-ACCCCTA------CCTC i ponAbe2.chr19 C 0 I 51 s nomLeu3.chr10 102654973 46 - 106955855 ---------CTCTAGGCCCCAT-TATCTGTGAGTGTTAGGCTCCCACCCCTA------CCTC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54942701 47 + 59248254 ---------CTCTAGGCCCCATGTATCTGTGAGTGTTAGACTCCTACCCCTA------CCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076397 47 + 51301725 ---------CTCTAGGCCCCCTGTATCTGTGAGTGTTAGACTCCCACCCCTA------CCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781577 47 + 50890351 ---------CTCTAGGCCGCATGTATCTGTGAGTGTTAGACTCCCACCCCTA------CCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350206 43 + 49145316 ---------TTCTAGGCCCCATGTATCTGT----GTTGGGCTCCCACCCCTA------ACTC i calJac3.chr22 C 0 C 0 s mm10.chr7 3619198 53 + 145441459 ---------CTTTGGACCTCATGTGTTCCTGAGTGCTTGTCTCCAACCTCTATGCTATTCTC i mm10.chr7 I 1422 C 0 s canFam3.chr1 19579267 34 - 122678785 CTCTGTGCCCTCTAGGTCCCAT-------------------TCCCGCTCCGT------C--- i canFam3.chr1 C 0 C 0 e rheMac3.chr19 59938563 661 + 64156825 I a score=13733.000000 s hg38.chr19_GL949747v2_alt 80151 6 + 729520 CACTTA s panTro4.chr19 59013603 6 + 63644993 CACTTA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655019 6 - 106955855 CACTTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54942748 6 + 59248254 CACTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076444 6 + 51301725 CACTTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781624 6 + 50890351 CACTTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350249 6 + 49145316 CACTTA i calJac3.chr22 C 0 C 0 s mm10.chr7 3619251 4 + 145441459 CACT-- i mm10.chr7 C 0 C 0 s canFam3.chr1 19579301 6 - 122678785 CACTGA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890017 51 + 60714840 I e rheMac3.chr19 59938563 661 + 64156825 I a score=147495.000000 s hg38.chr19_GL949747v2_alt 80157 71 + 729520 ACCCCCCAAAAAAGAGTTTTAAACCCTCCT-GTCTATAAGTAGGGATCCCAAGGTACCAAG-GATCCTCCTGG s panTro4.chr19 59013609 71 + 63644993 ACCCCCCAAAAAAGAGTTTTAAACCCTCCT-GTCTATAAGTAGGGATCCCAAGGTACCAAG-GATCCTCCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55890068 72 + 60714840 ACCCCACAAAAAAGAGTTTTAAATCCTCCTAGTCTATAAGTAGGGATCCC-AGGTACCAAGCGATCCTCCTGG i ponAbe2.chr19 I 51 M 933 s nomLeu3.chr10 102655025 71 - 106955855 ACCCCCCAAAGAAGAGTTTTAAACCCTCCT-GTCTGTAAGTAGGAATCCCGAGGTACCAAG-GATCCTCCTGG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54942754 69 + 59248254 ACCCCCCGA--AAGAGTTTTAAGCCCTCCT-GTCTATAAGTAGGGATCTCAGGGTACCAAG-GATCCTCCTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076450 69 + 51301725 ACCCCCCGA--AAGAGTTTTAAGCCCTCCT-GTCTATAAGTAGGGATCCCAGGGTACCAAG-GATCCTCCTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781630 69 + 50890351 ACCCCCGAA--AAGAGTTTTAAGTCCTCTT-GTCTATAAGTAGGGATCCCAGGGTACCAAG-GATCCTCCTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350255 70 + 49145316 ACCCCCCAAAAAAGAGTTTTAAACTCTCCT-ATCTAGAA-TAGGGATCCCAAGGTACCAAG-GATCTTCCTGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3619255 60 + 145441459 ----CTCAG------GATTTACACTGACCC-AGGT-TAAGTGGGGATGGTTGAGTGCTGAG-GACCCACCAAA i mm10.chr7 C 0 C 0 s canFam3.chr1 19579307 36 - 122678785 ------------------------------------TAAGTGGGGATCTCAGAATGCCATG-GGGTTTCCTGG i canFam3.chr1 C 0 C 0 e rheMac3.chr19 59938563 661 + 64156825 I a score=47600.000000 s hg38.chr19_GL949747v2_alt 80228 47 + 729520 ACGTGCTGGCCCTCCCTGCTGCCCT-CCCCCTGCGCACTTTATCTTCC s panTro4.chr19 59013680 47 + 63644993 ACGTGCTGGCCCTCTCTACTGCCCT-CCCGCTTCGCACTTTATCTTCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655096 47 - 106955855 AGGTGCTGGCCCTCCCTGCTGCCCT-CCCCCTTCGCACTTTATCTTCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54942823 39 + 59248254 ------AGGCCCTCCCCGCTGCCCT-CCCGCTTTGCAGTTTATCTT-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076519 39 + 51301725 ------AGGCCCTCCCCGCTGCCCT-CCCGCTTTGCAGTTTATCTT-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781699 39 + 50890351 ------AGGCCCTCCCCGCAGCCCT-CCCGCTTTGCAGTTTATCTT-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350325 35 + 49145316 AGGTGCTGGCCCTCCCC-------------CTTTGCACTTTATCTTCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3619315 36 + 145441459 ------GGGCCCTACTGGTTGTGCTGGCCTTTTCTCGCTCCC------ i mm10.chr7 C 0 C 0 s canFam3.chr1 19579343 47 - 122678785 AGGGGCAGGACCTCCCCGCTCCCCT-CCTCCTAAGTACCTGACTCCTA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890140 933 + 60714840 M e rheMac3.chr19 59938563 661 + 64156825 I a score=771947.000000 s hg38.chr19_GL949747v2_alt 80275 293 + 729520 CTTTGCCAAGGCTCACCTTCT---CTTCCCCTCTCTTC---AGAGCCACCTTCCCCTGGGCCTCACCCCTGTGTCTCTCCACAGCTGTAATTCTGCCCCCATTGAGCCCCTACTTCAAGTACTCCGTCATGATCAACAAGGCCACGCCCTACAACTACCCAGGTGAGTGGGGGCCAG--------------GCAGGGATCCCCGGAATAGGCCCAGCCTCCCTGTGCTGGCGTAA---------GGGCAGTTATGGGCAGGTCTTTCCTAAGCAGTTATCAGAGATTCTGCAGTGGTGCCCGGACCCCCC---GTTCCATTTTTT s panTro4.chr19 59013727 294 + 63644993 CTTTGCCAAGGCTCAGCTTCT---CTTCCCCTCTCCTC---AGAGCCACCTTCCCCTGGGCCTCACCCCTGTGTCTCTCCACAGCTGTAATTCTGCCCCCATTGAGCCCCTACTTCAAGTACTCCGTCATGATCAACAAGGCCACGCCCTACAACTACCCAGGTGAGTGGGGGCCAG--------------GCAGGGATCCCCGGAATAGGCCCAGCCTCCCTGTGCTGGGGTAA---------GGGCAGTTATGGGCAGGTCTTTCCTAAGCAGTTATCAGAGATTCTGCAGTGGTGCCTGGACCCCCC--TGTTCCATTTTTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655143 293 - 106955855 CTTTGCCAAGGCTCAGCTTCT---CTTCCCCTCTCCTC---AGAGCCACCTTCCCCTGGGCCTCACCCCTGTGTCTCTCCACAGCTGTAATTCTGCCCCCATTGAGCCCCTACTTCAAGTACTCCGCCATGATCAACAGGGCCACGCCCTACAACTACCCAGGTGAGTGGGGGCCAG--------------GCAGGGATCGCTGGCATAGGCCCAGCCTCCCTGGGCTGGGGTAA---------CGGCAGTTATGGGCAGGTCTTTCCTAAGCAGTTATCAGAGATTCTGCAGTGGTGCCTGGACCCCCC---ATTCCATTTTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59939224 295 + 64156825 CTTTGCCAAGGCTCAGATTCT---CTTTCCCTCTCCTC---AGAGCCACCTTCCCCTGGGGCTCACCCCTGTGTCTCTCCACAGCTATAATTATGCCCACATTCAGCCCCTACGTCAAGTACTCCATCATGATCAACGAGGCCACGCCCTACAACTACCCAGGTGAGTAGGGGCCCG--------------GCAGGGATCCCTGGGATGGGCCCAGCCTCCCTGTGCTGGGGTAG---------GGGCAGTTACGGGCAGCTGTTTCCTGAGCAGGCATCAGAGATTCAGCAGTGGTGCCTGGATTCCCC-CCGTTCCATTTTTT i rheMac3.chr19 I 661 C 0 s macFas5.chr19 54942862 292 + 59248254 ---TGCCAAGGCTCAGATTCT---CTTTCCCTCTCCTC---AGAGCCACCTTCCCCTGGGGCTCACCCCTGTGTCTCTCCACAGCTATAATTATGCCCACATTCAGCCCCTACGTCAAGTACTCCATCATGATCAACGAGGCCACGCCCTACAACTACCCAGGTGAGTAGGGGCCCG--------------GCAGGGATCCCTGGGATGGGCCCAGCCTCCCTGTGCTGGGGTAG---------GGGCAGTTACGGGCAGCTGTTTCCTGAGCAGGCATCAGAGATTCAGCAGTGGTGCCTGGATTCCCC-CTGTTCCATTTTTT i macFas5.chr19 C 0 I 319 s papAnu2.chr19 47076558 290 + 51301725 ---TGCCAAGGCTCagattct---ctttccctctcctc---agaGCCACCTTCCCCTGGGGCTCACCCCTGTGTCTCTCCACAGCTATACTTATGCCCACATTCAGCCCCTACGTCAAGTACTCCATCATGATCAACGAGGCCACGCCCTACAACTACCCAGGTGAGTAGGGGCCAG--------------GCAGGGATCGCTGGGATGGGCCCAGCCTCCCTGTGCTGGGGTAG---------GGGCAGTTACGGGCAGCTGTTTCCTGAGCAGGCATCAGAGATTCAGCAGTGGTGCCTGGATTTCCC---GTTCCATTTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781738 292 + 50890351 ---TGCCAAGGCTCAGATTCC---CTTCCCCTCTCCTC---AAAGCCACCTTCCCCTGGGGCTCACCCCTGTGTCTCTCCACAGCTATAATTATGCCCGCATTCAGCCCCTACGTCAAGTACTCCATCATGATCAACAAGGCCACGCCCTACAACTACCCAGGTGAGTAGGGGCCAG--------------GCAGGGATCCCTGGGATGGGCCCAGCCTCCCTGTGCTGGGGTAG---------GGGCAGTTACGGGCAGCTGTTTCCTGAGCAGGCATCAGAGATTCAGCAGTGGTGCCTGGATTCCCC-CTGTTCCATTATTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350360 288 + 49145316 CTTTGCCAAGGCTCAGCCTCT---CTTCCCCTCTCCTC-AGAGAGCTGCCTTCCCCTGGGCCTCACACCTGTGTCTCTCCACAGCTGTAATTCTGCCCCCAATCAGCCCCTACTTCAAGTACTCTGTCATGATCAACAAGGCCACGCCCTACAACTACCCAGGTAAGTGGGGGCCCT--------------GCAGGGAT-----------------GCACCCTGTGCTGGGGCGGGGTGGGGCCGGGCTGGTATGGGTGGGTCTTTCCTAAGCAGGGGTCAGACAT--AGCAGTGCTGCCTGTACTCCCCCCTGCTCAACTTTTT i calJac3.chr22 C 0 C 0 s mm10.chr7 3619351 212 + 145441459 TTTTGCCAGGGCTTTTTCTAC---CCTTTCCCCACCCCTGGAGAGCTACTTCATCCTGGGGT---CTTTTGTCTTTCTCCACAGCTATAATTATGCCCATGATTAGCCCCTACACCAAGTATGCTAGCATGATCAACAAGGCCACACCCTACAACTACCCAGGTGAGCAGGGA-----------------------------------------------CCTGTGTTGGGGGGA---------GGGC------------------------CAGACATCTG------TGTAGGAGAGTCCTTA--------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19579390 299 - 122678785 GTTTGCTGAGGTTCAGCTTCTGCCCCTCCCCTGTCCTG---AAAGCCACCTTCCCCTGGGCCTCACCC----GTCTCTCCACAGCTGTGATTCTGCCCATCTTCAGTCCCTTCACCAAATATGCCACCATGATCAACCAGGCCACACCCTACAACTATCCAGGTGAGTGGGAGCTGGAGGGCTGGCCCAAAGCAGGGGT-GGAGGGTGAGGAGGGACCTTCCTGCGCTGGGGGAG---------GAATAATCATGGGTAGGTTCTTCCTCAGCAAGGATCTGAGAACCTGCTGTATGGACTGGACTTTCT---------TTTTTC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890140 933 + 60714840 M a score=60685.000000 s hg38.chr19_GL949747v2_alt 80568 25 + 729520 AAGAATTGAGATATAATTCGTATAC s panTro4.chr19 59014021 25 + 63644993 AAGAATTGAGATATAATTCGTATAC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655436 25 - 106955855 AAGAATTGAGATATAATTCGTATAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59939519 25 + 64156825 AAGAATTGAGATATAATTCGTATCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54943473 25 + 59248254 aagaaTTGAGATATAATTCGTATCC i macFas5.chr19 I 319 C 0 s papAnu2.chr19 47076848 25 + 51301725 AAGAATTGAGATATAATTAGTGTCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782030 25 + 50890351 AAGAATTGAGCTATAATTCGTATAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350648 25 + 49145316 AGGAATTGAGCTCCAATTCCTATAC i calJac3.chr22 C 0 C 0 s mm10.chr7 3619563 25 + 145441459 ATGCATTGAAATGTTCTTTGTCCAC i mm10.chr7 C 0 C 0 s canFam3.chr1 19579689 19 - 122678785 ------TGAGATCTGATCCATGTGC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890140 933 + 60714840 M a score=19457.000000 s hg38.chr19_GL949747v2_alt 80593 11 + 729520 TATTCTGTGTT s panTro4.chr19 59014046 11 + 63644993 TAGTCTGTGTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655461 11 - 106955855 TATTCTGTGTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59939544 11 + 64156825 TATTCTGTGTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54943498 11 + 59248254 TATTCTGTGTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076873 11 + 51301725 TATTCTGTGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782055 11 + 50890351 TATTCTGTGTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350673 9 + 49145316 TGCTCTGTT-- i calJac3.chr22 C 0 C 0 s mm10.chr7 3619588 11 + 145441459 GCTTttttttt i mm10.chr7 C 0 C 0 e canFam3.chr1 19579708 0 - 122678785 C e ponAbe2.chr19 55890140 933 + 60714840 M a score=1207.000000 s hg38.chr19_GL949747v2_alt 80604 9 + 729520 ---TGTGCT-----TCG s panTro4.chr19 59014057 9 + 63644993 ---TGTGCT-----TCG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655472 14 - 106955855 ---TGTGCTTTCAGTTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59939555 9 + 64156825 ---TGTGCT-----TCG i rheMac3.chr19 C 0 I 15 s mm10.chr7 3619599 9 + 145441459 tcctttcct-------- i mm10.chr7 C 0 C 0 e canFam3.chr1 19579708 0 - 122678785 C e ponAbe2.chr19 55890140 933 + 60714840 M e calJac3.chr22 45350682 0 + 49145316 C e chlSab2.chr6 46782066 0 + 50890351 C e papAnu2.chr19 47076884 0 + 51301725 C e macFas5.chr19 54943509 0 + 59248254 C a score=27502.000000 s hg38.chr19_GL949747v2_alt 80613 132 + 729520 ---t-ttttgtttttttgg----gtttttttgagacagagtctcgctctgtcgccaaggctggagtgcagtggcgcgatctcagctcactgcaagctc--------------------------------agcctcccgagtagctgggactacaggtgcccgccaccacga s panTro4.chr19 59014066 132 + 63644993 ---t-ttttgtttttttgg----gtttttttgagacagagtctcgctctgtcgccaaggctggagtgcagtggcgcgatctcagctcactgcaagctc--------------------------------agcctcccgagtagctgggactacaggtgcccgccaccacga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655486 169 - 106955855 ---TGttttgttttttttgttttttttttttgagacagaattttgctctgtcgcccaggctggagtgcagtggtgtgatctcagctcactgcaagctccgcctcctgggttcacaccattctcctgccttagcctcccaagtagctgggactacaggcacccgccaccacga i nomLeu3.chr10 C 0 C 0 s mm10.chr7 3619608 71 + 145441459 tttc-ttttcttttcttttttcttttcttttgagatagggtttctctgtgtagccctggctg----------------------------------tc----------------------------------------------ctgtaact-------------------- i mm10.chr7 C 0 C 0 e canFam3.chr1 19579708 0 - 122678785 C e ponAbe2.chr19 55890140 933 + 60714840 M e calJac3.chr22 45350682 0 + 49145316 C e chlSab2.chr6 46782066 0 + 50890351 C e papAnu2.chr19 47076884 0 + 51301725 C e macFas5.chr19 54943509 0 + 59248254 C e rheMac3.chr19 59939564 15 + 64156825 I a score=4172.000000 s hg38.chr19_GL949747v2_alt 80745 45 + 729520 cacgcaaactttttcgtatttttttagtagaggcggggtttcacc s panTro4.chr19 59014198 43 + 63644993 catgcaaattttttcgta--tttttagtagaggcggggtttcacc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655655 43 - 106955855 ccagctaatttttttgta--tttttagtagagacggagtttcacc i nomLeu3.chr10 C 0 C 0 s mm10.chr7 3619679 11 + 145441459 --------------------cacttagtaga-------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19579708 32 - 122678785 CATAAAAATCATTTCCTGTCTGTTT-------------TTGCACT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890140 933 + 60714840 M e calJac3.chr22 45350682 0 + 49145316 C e chlSab2.chr6 46782066 0 + 50890351 C e papAnu2.chr19 47076884 0 + 51301725 C e macFas5.chr19 54943509 0 + 59248254 C e rheMac3.chr19 59939564 15 + 64156825 I a score=34764.000000 s hg38.chr19_GL949747v2_alt 80790 98 + 729520 gtgttagccaggattgtctcgatctcctgaccttgtgatccactcacctcggcctcccaaagtgctgggattacaggtgtgagccaccg-cgcctggcc s panTro4.chr19 59014241 98 + 63644993 gtgttagccaggatggtctcgatctcctgaccttgtgatccactcacctcggcctcccaaagtgctgggattacaggcgtgagccactg-cgcctggcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655698 98 - 106955855 atattagccaggatgctctcgatctcctgaccttgtgatccactcgcctcggcctcccaaagtgctgggattacaggcgtgagccaccg-cgcctggcc i nomLeu3.chr10 C 0 C 0 s mm10.chr7 3619690 84 + 145441459 -------ccaggctggccttgaactca-------gaaatccacctgcctctgcctccc-aagtgctgggattgaaggggtgcaccaccaccgcccagtt i mm10.chr7 C 0 C 0 e canFam3.chr1 19579740 0 - 122678785 C e ponAbe2.chr19 55890140 933 + 60714840 M e calJac3.chr22 45350682 0 + 49145316 C e chlSab2.chr6 46782066 0 + 50890351 C e papAnu2.chr19 47076884 0 + 51301725 C e macFas5.chr19 54943509 0 + 59248254 C e rheMac3.chr19 59939564 15 + 64156825 I a score=6636.000000 s hg38.chr19_GL949747v2_alt 80888 5 + 729520 TGTGC----- s panTro4.chr19 59014339 5 + 63644993 TGTGC----- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655796 5 - 106955855 TGTGC----- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54943509 5 + 59248254 TGTGC----- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076884 5 + 51301725 TGGGC----- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782066 5 + 50890351 TGTGC----- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350682 5 + 49145316 TGTGC----- i calJac3.chr22 C 0 C 0 s mm10.chr7 3619774 10 + 145441459 TGTCCACACT i mm10.chr7 C 0 C 0 e canFam3.chr1 19579740 0 - 122678785 C e ponAbe2.chr19 55890140 933 + 60714840 M e rheMac3.chr19 59939564 15 + 64156825 I a score=65229.000000 s hg38.chr19_GL949747v2_alt 80893 37 + 729520 TTCGAGTTTCTATTAC-----CTTTCCAGATTTCTGTCTCTC s panTro4.chr19 59014344 37 + 63644993 TTCGAGTTTCTATTAC-----CTTTCCAGATTTCTATCTCTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655801 37 - 106955855 TTCGAGTTTCTATTAC-----CTTTCCAGATTTCTGTCCCTC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54943514 21 + 59248254 TTCGAGTTTCTATTAC-----CTTTC---------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076889 37 + 51301725 TTCGAGTTGCTATTAC-----CTTTCCACATTTGTGTCCCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782071 37 + 50890351 TTCGAGTTTCTATTAC-----CTTTCCACATTTCTGTCCCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350687 36 + 49145316 TTCCAGTTTCCATTTC-----C-TTCCAGgtttctgtccctc i calJac3.chr22 C 0 C 0 s mm10.chr7 3619784 42 + 145441459 TTTAAGTTACCCTAACATGCTCTCTCCAGATTTCTGTTCATC i mm10.chr7 C 0 C 0 s canFam3.chr1 19579740 37 - 122678785 TTTGAGTTTCTGTTGT-----CATTCCAGATTTGTATTCCTT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890140 933 + 60714840 M e rheMac3.chr19 59939564 15 + 64156825 I a score=618503.000000 s hg38.chr19_GL949747v2_alt 80930 297 + 729520 TCTGGGTTCCCATCTGTGGTGGTTTCTTGGTCTCCATCTTCTCAGGTTTCTGTCCTGTTTCCCCATCTCTTTTGACCCTAGCTCTC-TAGTGCGCGGGAtctct------------------------ccctcg----ctatctctctggttttccgtgtctctcagtctctgtatttcccgcctctttctGCATCACTGATTCTCTGACCCTTCCCC---TCTCACCCCTGGG--GTCCCCCTTCCCTCTCTGAACATAAAGCGACAGACCAGCTCTTCTCTCCAGGGCCCTGGAGACGTGCTGGTCTCAGTGGCCCA-CCTCCTGCCCCA s panTro4.chr19 59014381 295 + 63644993 TCTGGGTTCCCATCTGTGGTGGTTTCTCGGTCTCCATCTTCTCAGGTTTCTGTCCTGTTTCCCCATCTC--TTGACCCTAGCTCTC-TAGTGCGCGGGATCTCT------------------------CCCTCA----CTATCTCTCTGGTTTTCCGTGTCTCTCAGTCTCTGTATTTCCCGCCTCTTTCTGCATCACTGATTCTCTGACCCTTCCCC---TCTCACCCCTGGG--GTCCCCCTTCCCTCTCTGAACATAAAGCAACAGACCAGCTCTTCTCTCCAGGGCCCTGGAGACGTGCTGGTCTCAGTGGCCCA-CCTCCTGCCCCA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655838 290 - 106955855 TCTGGGTTCCCATCTGTGGTGGTTTCTTGGTCTCCATCTTCTCAGGTTT------------CCCATCTCTTTCGACCCTCGCTCTCTTCGTGCGTCGGAtctct------------------------cgctcgctgtctatctctctggttttccatgtctctcagtctctGTATTTCCAGCCTCTTTCTGCATCACTGATTCTCTGACCCTTCCCC---TCTCACCCCTGGG--GTCCCCCTTCCCTCTCTGAACATAAAGCAACAGACCAGCTCTTCTCTCCAGGGCCCTGGAGACGTGCTGGTCTCAGTGGCCCA-CCTCCTGTCCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59939579 286 + 64156825 TCTGGGTTCCCATCTGTGTTGTTTTCT--GTCTCCATCTTTTCAGGTTTCTGTCCTGTTTCCCCATCTCTTTCGACCCTAGctcgc-tctcg------------------------------------ctctct----ctctctctctggttttccatgtctctcagtctctgtatttcctgcctctttctgcatcactgattctctgacccttcccctcatctcagccctcgg--gccccccttctctctctGAACATAAAGCGACAGACCAGCTCTTCTCTCCAGGACTCTGGAGACATGCTGGTCTCAGTGGCCCA-CCTCCTGTCCCA i rheMac3.chr19 I 15 C 0 s macFas5.chr19 54943535 280 + 59248254 --TGGGTTCCCATCTGTGTTGTTTTCT--GTCTCCATCTTTTCAGGTTTCTGTCCTGTTTCCCCATCTCTTTCGACCctagctcgc-t----------------------------------------cgctcg----ctctctctctGGTTTTCCATGTCTCTCAGTCTCTGTATTTCCTGCCTCTTTCTGCATCACTGATTCTCTGACCCTTCCCCTCCTCTCAGCCCTGGG--GTCCCCCTTCCCTCTCTGAACATAAAGCGACAGACCAGCTCTTCTCTCCAGGACTCTGGAGACATGCTGGTCTCAGTGGCCCA-CCTCCTGTCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076926 302 + 51301725 TCTGGGTTCCCACCTGTGTTGTTTTCTCGGTCTCCATCTTTTCAGGTTTCTGTCCTGTTTCCCCATCTCTTTCGACCCTAGCTCGC-TCTCGCGCAGGCTctca----------------------cttgctct----ctctctctctggtcttCCATGTCTCTCAGTCTTTGTATTTCCTGCCTCTTTCTGCATCACTGATTCTCTGacccttcccctcctctcagcCCTGGG--GTCCCCCTTCCCTCTCTGAACATAGAGCGACAGACCAGCTCTTCTCTCCAGGACTGTGGAGACATGCTGGTCTCAGTGGCCCA-CCTCCTGTCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782108 302 + 50890351 TCTGGGTTCCCATCTGTGTTGTTTTCTCGGTCTCCATCTTTTCAGGTTTCGGTCCTGTTTCCCCATCTCTTTTGACCCTAGCTCGC-TCTCGCGCAGGCTCTCA----------------------CTTGCTCT----CTATCTGTCTGGTTTTCCATGTCTCTCAGTCTCTGTATTTCCTGCCTCTTTCTGCATCACTGATTCTCTGACCCTTCCCCTCCTCTCAGCCCTGGG--GTCCCCCTTCCCTCTCTGAACATAGAGCGACAGACCAGCTCTTCTCTCCAGGACTCTGGAGACTTGCTGGTCTCAGTGGCCCA-CCTCCTGTCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350723 323 + 49145316 tctgggttgctgtctgtggagttctctcggtctccatctttacgggtttctgtcctgtttccccatctgttttgggggtctgtctc-tgtctcaccggttttccatgtctccagttttccatgtctctcggtct----ccatctctctggttttccatgtctctcggtctctgtctctCCCTGACTCTTCTGCATCACCGATTCTCCGATCCTTACCCTCCTCTCACCCCCTGGCATCTCCCTTTCCCTCTGTGAATATAAAGCGACCAA-CAGCTCTTCTCTCCAGG-CCCTGGAGACGTGCTGGTCTCAGCGGCCC--CCTCCTGTCCCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3619826 171 + 145441459 -----------------------------------------------------------TCCCAGTTCCTTT---------CTCTC-TGTTG---GAGAGATCT------------------------CCCTCA----C-------------TTCCCTGTGTCTTTGCGTCTGT------------------------TGAATCTCTGGCCCTCACTTTCCTTTT-TCCCTGGA-----------------------ATACAGACACAAACCAGCTGTTTTCTCCAGGACTCTGGAGAGCTGCTGCTCTCAGTGGCGCATCCTTCTGTTTTG i mm10.chr7 C 0 C 0 s canFam3.chr1 19579777 208 - 122678785 ------------------------TCTGGACTTTTGTCATTCTAGGTGTCTGTCCTGTT----------------------------T--------------------------------------------------CTGTCTCTCTGCTTTTCCGTACCTCCAGGTCTCTAT-CTCCCTGCTTCTCTCTGCATC-------------CCCTCTCTCACCTCTC--CTCTGGG--GTCCCATTTCTCTCTTTGAGTCCAAACTGACAGACTAGC----CTTTATGGGCCTCCCAAGACCTGTTGGTCTCAATGGCCCACCCTCCTGCCCCA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890140 933 + 60714840 M a score=653025.000000 s hg38.chr19_GL949747v2_alt 81227 154 + 729520 CAGTGCCCGTCCGTGATGATGGGAACATGCCCGACGTGCCCAGCCACCCCCAGGACCCTCAGGGCCCCAGCCTGGAGTGGCTGAAGAAACTGTGAGCACCTCCACTGACA--GAGGCGGCCCCTCCCACG--GCTC-CCAATAAAAATGTGAAAACCAA s panTro4.chr19 59014676 154 + 63644993 CAGTGCCCGTCCGTGATGATGGGAACATGCCCGACGTGCCCAGCCACCCCCAGGACCCCCAGGGCCCCAGCCTGGAGTGGCTGAAGAAACTGTGAGCACCTCCACTGACA--GAGGCGGCCCCTCCCACG--GCTC-CCAATAAAAATGTGAAAACCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55891110 154 + 60714840 CAGTGCCCGTCCGCGATGATGGGAACATGCCCGACATGCCCAGCCACCCCCAGGACCCTCAGGGCCCCAGCCTGGAGTGGCTGAAGAAACTGTGAGCACCTCCACTGACA--GAGGCGGCCCCTCCCACG--GCTC-CCAATAAAAATGTGAAAACCAA i ponAbe2.chr19 M 933 C 0 s nomLeu3.chr10 102656128 154 - 106955855 CAGTGCCCGTCCGCGATGATGGGAACATGCCCGACGTGCCCAGCCACCCCCAGGACCCTCAGGGCCCCAGCCTGGAGTGGCTGAAGAAACTGTGAGCACCTCCACTGACA--GAGGCGGCCCCTCCCACG--GCTC-CCAATAAAAATGTGAAAACCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59939865 154 + 64156825 CAGTGCCCGCCCGTGATGATGGGAACATGCCGGACGCTCCCAGCCACCCCCAGGACCCTCAGGGCCCCAGCCCGGAGTGGCTTAAGAAACTGTGAGCACCTTCACTGACA--GAGGCGGCACCTCCCACG--GCTC-CCAATAAAAATGTGAACACCAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54943815 154 + 59248254 CAGTGCCCGTCCGTGATGATGGGAACATGCCGGACGTGCCCAGCCACCCCCAGGACCCTCAGGGCCCCAGCCTGGAGTGGCTTAAGAAACTGTGAGCACCTTCACTGACA--GAGGCGGCCCCTCCCACG--GCTC-CCAATAAAAATGTGAACACCAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47077228 154 + 51301725 CAGTGCCGGTCCGTGATGATGGGAACATGCCGGACGTGCCCAGCCACCCCCAGGACCCTCAAGGCCCCAGCCTGGAGTGGCTGAAGAAACTGTGAGCACCTTCACTGACA--GAGGCGGCCCCTCCCACG--GCTC-CCAATAAAAATGTGAACACCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782410 154 + 50890351 CAGTGCCCGTCCGTGATGATGGGAACATGCCGGACGTGCCCAGCCACCCCCAGGACCCTCAGGGCCCCAGCCTGGAGTGGCTGAAGAAACTGTGAGCACCTTCACTGACA--GTGGCGGCCCCTCCCATG--GCTC-CCAATAAAAATGTGAAAAGCAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45351046 150 + 49145316 CAGTGCCTGTCCGCGATGATGGGAACATGCCCGACATACCCAGCCACCCCCAGGACCCCCAGGGACCCAGCCTGGAGTGGCTGAAGAACCTGTGAGCACCTCCACTGACC--AAGGCG----CACCCTCA--GCTC-CCAATAAAAATGTGAAAACCAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3619997 157 + 145441459 CAGTGCCTGTGAGAGATGACGGGAACATGCCTGATGTGCCCAGCCACCCTCAGGATCCTCTGGGTCCAAGCTTGGACTGGCTGAAGAACCTGTGAATGCCTCTGCTGATG--GAAGAGGCCCCTTCCCTGTTGCTCTCCAATAAAAATGTGAAAACTAA i mm10.chr7 C 0 I 105 s canFam3.chr1 19579985 154 - 122678785 CAGTGCCCCTCCGAGATGATGGGAACATGCCCGACGTGCCCAGCCACCCCCAGGACCCCCAGGGCCCCAGTCTGGAGTGGCTGAAGAAATTGTGAGCACCTCTGGTGACATGGAGGTGGCCCCTTCC-CT--GTAG-TCAAT-AAAATGCATAGAGTGA i canFam3.chr1 C 0 C 0 a score=720995.000000 s hg38.chr19_GL949747v2_alt 81381 177 + 729520 CCCCCGAACGTG-AGCATGTGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCGGGGTGAGTGT------G-GGGTCAGTTTATTGGGCAT----GCGTCAGTCAGAGGCTGGGCTGGCCAGGGTCGGGTAGGGCAGCAGTTTGTCTGGACCCCGAGAAACCCAACTGGAATCCAGGGCCTCATCTG s panTro4.chr19 59014830 177 + 63644993 CCCAAGAACGTG-AGCATGTGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCGGGGTGAGTGT------G-GGGTCAGTTTACTGGGCAT----GCGTCAGTCAGAGGCTGGGCTGGCCAGGGTCGGGTAGGGCAGCAGTTTGTCTGGACCCCGAGAAACCCAACTGGAATCCAGGGCCTCATCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55891264 177 + 60714840 CCCCAGAACGTG-AGCATGCGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCGGGGTGAGTGT------G-GGGTCAGTTTACTGGGCAT----GGGTCAGTCAGAGGCTGGGCTGGCCAGGGTCGGGTAGGGCAGCAGTTTGTCTGGACCCCGAGAAACCCAACTGGAATCCAGGGCCTCATCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102656282 175 - 106955855 CCCCAGAACGTG-AGC--GTGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCGGGGTGAGTGT------G-GGGTCGGTTTACTGGGCAT----GGGTCAGTCAGAGGCTGGGCTGGCCAGGGTCAGGTAGGGCAGCAGTTTGTCTGGACCCCGAGAAACCCAACTGGAATCCAGGGCCTCATCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59940019 176 + 64156825 CCCCAGAGCGTG--GCATGTGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCAGGGTGAGTGT------G-GGCTCAGTTTATTGGGCAT----GGGTCAGTCAGAGGCTGGGCTGGCCAGAGTTGGGTAGGGCAGCAGTTTATCTGGACCCCGAGAAACCCAGCTGGAATCCAGGGCCTCATCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54943969 176 + 59248254 CCCCAGAGCGTG--GCATGTGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCAGGGTGAGTGT------G-GGCTCAGTTTATTGGGCAT----GGGTCAGTCAGAGGCTGGGCTGGCCAGAGTTGGGTAGGGCAGCAGTTTATCTGGACCCCGAGAAACCCAGCTGGAATCCAGGGCCTCATCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47077382 176 + 51301725 CCCCAGAGCGTG--GCATGTGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCAGGGTGAGTGT------G-GGCTCAGTTTACTGGGCAT----GGGTCAGTCAGAGGCTGGGCTGGCCAGAGTTGGGTAGGGCAGCAGTTTATCTGGACCCCGAGAAACCCAGCTGGAATCCAGGGCCTCATCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782564 176 + 50890351 CCCCAGAGCGTG--GCATGTGTGTGATCAGCGGTGGGAACCAGTAGACGGTGGCCAGGGTGAGTGT------G-GGCTCAGTTTACTGGGCAT----GGGTCAGTCAGAGGCTGGGCTAGCCAGAGTTGGGTAGGGCAGCAGTTTGTCTGGACCCCGAGAAACCCAGCTGGAATCCAGGGCTTCATCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45351196 176 + 49145316 CCCCAGAATGTG-AGCATGTGTGTGATCAGAGGCGGGAACAGG-AGACGGTGGCCAGGGTGAGTGT------G-GGGTCAGTTTACTGGGCGT----GGGTCAATCAGAGGGTGGGCTGGCTAGGGTCGGGTAGGGCAGCAGTTTGTCTGGACCCCGAGACACCCAACTGGAATCCAGGGCCTCGTCTG i calJac3.chr22 C 0 C 0 s mm10.chr7 3620259 184 + 145441459 cctccaacccTGGAACCTGGATATGATCAGAGGTGGGAGCAA-TAAACGGTGACCTAGACAAGTGTACATAGG-GAATCTGTTTATTGGGGAG---AGGGTTAGTCAAAGGGTGGGCTGGCCAGGGTAGGGTAGGGTAGCAATTTGTCTGGCTCTCGGGAAACCCAACTTGAATCCAAGGCCTCATCTG i mm10.chr7 I 105 C 0 s canFam3.chr1 19580139 174 - 122678785 CCCCAGCATCTG-AGCTTGAGTGTGATCAGAGGTGGAAACA--------GTGGCCAAGGCGAGTCT------GCCGGTGAGTTTATTGGGGGTGGGGGGGTCAGTCAAATGGGGGACTGGCTAGGGTGGGGTAGGGCAGCAGTTTGTCTGGCCCCCGAGAAACCCAACTGGAGTCCAGGGCCTCATCTG i canFam3.chr1 C 0 C 0 a score=269691.000000 s hg38.chr19_GL949747v2_alt 81558 80 + 729520 CTTCAAAGCCAAAGTCTTCCTCAACCTTAATCTGCAGGAGATAAGGAACAAGGTGTTAACAGGCCTGGGAATCTAGAAAA s panTro4.chr19 59015007 80 + 63644993 CTTCAAAGCCAAAGTCTTCCTCAACCTTAATCTGCAGGAGATAAGGAACAAGGTGTTAACAGGCCTGGGAATCTAGAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55891441 80 + 60714840 CTTCAAAGCCAAAGTCTTCCTCAACCTTAATCTGCAAGAGATAAGGAACAAGGTGTTAACAGGCCTGGGAATCTAGAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102656457 80 - 106955855 CTTCAAAGCCAAAGTCTTCCTCAACCTTAATCTGCAGGAGATAAGGAACAAGGTGTTAACAGGCCTGGGAATCTAGAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59940195 80 + 64156825 CTTCAAAGCCAAAGTCTTCCTCGACCTTAATCTGCAGGAGAGAAGGAACAAGGTGTTAATAGGCCTGAGAATCCAGAAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54944145 80 + 59248254 CTTCAAAGCCAAAGTCTTCCTCGACCTTAATCTGCAGGAGAGAAGGAACAAGGTGTTAATAGGCCTGAGAATCCAGAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47077558 80 + 51301725 CTTCAAAGCCAAAGTCTTCCTCGACCTTAATCTGCAGGAGAGAAGGAACAAGGTGTTAATAGGCCTGAGAATCCAGAAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782740 78 + 50890351 CTTCAAAGCCAAAGTCTTCCTCGACCTTAATCTGCAG--GAGAAGGAACAAGATGTTAATAGGCCTGAGAATCCAGAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45351372 75 + 49145316 CTTCAAAGCCAAAGTCTTCCTCGACCTTAATCTGCAGGAGAT----AACAAAGTGTTAGTCAG-CTGGGAATCTAGAAAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3620443 78 + 145441459 CTTCAAAGCCAAAGTCTTCCTCAACCTTAATCTG-AAAAGATACGGAACAAGATGCGAG-GGATATGGAGACCCAGGAGA i mm10.chr7 C 0 I 207 e canFam3.chr1 19580313 0 - 122678785 C a score=301312.000000 s hg38.chr19_GL949747v2_alt 81638 118 + 729520 TCCCATCAGCTTCACCAtttttgttttcattttgttttgctttttaaagagac-------agggtct-cactctgttgcccaggctggagtgcagtggtgccatcatagttcactgcagcctctgc s panTro4.chr19 59015087 126 + 63644993 TCCCATCAGCTTCACCAtttttgttttcattttgttttgctttttaaagagactctttaaagagactccactctgttgcccaggctggagtgcagtggtgccatcatagttcactgcagcctctgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55891521 116 + 60714840 TCCCATCAGCTTCACCAtttttgttttcattttgttttgattttt--agagac-------agggtct-cactctgttgcccaggctggagtgcagtggtgccatcatagttcactgcagcctctgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102656537 118 - 106955855 TCCCATCAGCTTCACCAtttttgttttcattttgttttgctttttaaagagac-------agggtct-cactctgttgccccggctggagtgcagtggtgccatcatagttcactgcagcctctgc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59940275 100 + 64156825 TCCCATCAGCTTCACCAtttttgtttttgttttgttttgatttttaaagagac-------agggtct-------------------ggagtgcagtggtgccatcacagttcactgcagcctctgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54944225 100 + 59248254 TCCCATCAGCTTCACCAtttttgtttttgttttgttttgatttttaaagagac-------agggtct-------------------ggagtgcagtggtgccatcacagttcactgcagcctctgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47077638 100 + 51301725 TCCCATCAGCTTCAccatttttgttttcgttttgttttgatttttaaagagac-------agggtct-------------------ggagtgcagtggtgccatcacagttcactgcagcctctgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782818 100 + 50890351 TCCCATCAGTTTCACCAtttttgttttcattttgttttgattttcaaagagac-------agggtct-------------------ggagtgcagtggtgccatcacagttcactgcagcctctgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45351447 118 + 49145316 TCCGATCAGCTTCACTGttttcgttttcattttgtttcgatttttaaagagac-------aggccct-cactctgttgcccaggctggagtgcagtggtgccatcatagtttactgcaggctctgc i calJac3.chr22 C 0 C 0 e mm10.chr7 3620521 207 + 145441459 I e canFam3.chr1 19580313 0 - 122678785 C a score=1224062.000000 s hg38.chr19_GL949747v2_alt 81756 444 + 729520 ctcccaggctcaagtgatcctcccacctcagcttcccaagtagctgggactacaggcacttgccaaccaagcctaacatg-ttttttctttt--------------tggtagagatggg-gtctcagtatgttgctcaggcaggtctcagactcctggcctcaagtgatcctcccacctaggcctcccaaagtgccgggattacaggcatgagccactgcacctggccAGCCTCACAGTTCTTGTCTGCCCAGGCCAGTCACCTTCCTCCTTACACCTCAGAGGCAATCCCAGTGTTCCTGGGTCCAGATGTTCTTCCAGCTTTCCTCCCCACACTGGGCCTTCCCTTCCACTCCGTCTTCTC------------TGATCCTTCCTTCTCCTCTACTCCCAGCCTTCTCTA-------GCTATTTTTCCTTCTCCAGGTCTTCCTCTTTCCCTTTCCAACTTTGCC-TCCTTTTT-ACCCA s panTro4.chr19 59015213 440 + 63644993 ctcccaggctcaagtgatcctcccacctcagcttcccaagtagctgggactacaggcacttgccaaccaagcctaacatg-ttttttctttt--------------tggtagagatggg-gtctcagtatgttgctcaggcaggtctcagactcctggcatcaaatgatcctcccacctaggcctcccaaagtgctgggattacaggcatgagccactgcacctggccAGCCTCACAGTTCTTGTCTTCCCAGGCCAGTCACCTTCCTCCTTACACCTCAGAGGCAATCCCAGTGTTCCTGGGTCCAGATGTTCTTCCAGCTTTCCTCCCCACACTGGGccttcccttccactccgtcttctc------------tga----tccttctcctctactcccagccttctcta-------gctatttttccttctccaggtcttcctctttccctttcCAACTTTGCC-TCCTTTTC-ACCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55891637 452 + 60714840 ctcccaggctcaagtgatcctcccatctcagcttcccaagtagctgggactacaggcacatgccaaccaagcctaacatgtttttttctttt--------------tggtagagatggg-gtctcagtatgttgctcaggcaggtctcaaactcctggcatcaagtgatcctcccacctaggcctcccaaagtgctgggattacaggcatgagccactgcacctggccAGCCTCGCAGTTCTTGTCTTCCCAGGCCAGTCACCTTCCTCTTTACACCTCAGAGGCAATCCCAGTGTTCCTGGGTCCAGATGTTCTTCCAGCTTTCCTCCCCGCACTGGGCCTTCCCTTCCACTCCATCTTCTC------------TGATCCTTCCTTCCCCTCTACTCCCAGCCTTCTATAGCTATCTGCTATTTTTCCTTCTCCAGGTCTTCCTCCTTCCCTTTCCAACTTTGTC-TCCTTTTT-ACCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102656655 433 - 106955855 ctcccaggctcaagtgatcctcccacctcagcttcccaagcagctgggactacaggcacatgccaaccaagcctaacatgtttttttctttt--------------tggtagagatggg-gtctcagtatgttgctcaggcaggtctcaaactcctggcatcaagtgatcctcccacctaggcc------------gggattacaggcatgagccactgcacctggccAGCCTCGCAGTTCTTGTCTTCCCAGGCCAGTCACCTTCCTCCTTACACCTCAGAGGCAACCCCAGTGTTCCTGGGTCCAGATGTTCTTCCAGCTTTCCTCCCCGCACTGGGCCTTCCCTTCCACTCCGTCTTCTC------------TGATCCTTCCTTCTCCTCTACTCCCAGCCTTCTATA-------GCTATTTTTCCTTCTCCAAGTCTTCCTCCTTCCCTTTCCAACTTTGCC-TCCTTTTT-ACCCA i nomLeu3.chr10 C 0 I 284 s rheMac3.chr19 59940375 455 + 64156825 ctcccaggctcaagtgaccctcccacctcagcttcccaagcagctgggactacaggcacatgccaatcatgcctaacatgtttttttctttt--------------tggtagagatgggagtcacagtatgttgctcaggctagtctcaaactcctggcatcaagtggtcc-cccatgtaggcctcccaaagtgctgggattacagacatgggccactgcacccggccAGCCTCACCGTTCTTGTCTTCCTAGGCCAGTCACCTTCCTCCTCACACCTCAGA-GCAATCCCAGTGTTCCTGGGTCCAGATGTTCTTCCGGCTTTCCTCCCCGCACTGGGCCTTCCCTTCCACCCCATCTTCTCTGATCCTTCCTTTGATCCTTCCTTCTTCTCTACTCCTAGCCTTGTCTA-------GCTATTTTTCCTTCTCCAGGTCTTCCTCCTTCCCTTTCCAACTTTGCC--TCCTTTC-ACCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54944325 455 + 59248254 ctcccaggctcaagtgaccctcccacctcagcttcccaagcagctgggactacaggcacatgccaatcatgcctaacatgtttttttctttt--------------tggtagagatgggagtcacagtatgttgctcaggctagtctcaaactcctggcatcaagtgatcc-cccatgtaggcctcccaaagtgctgggattacagacatgggccactgcacccggccAGCCTCACCGTTCTTGTCTTCCTAGGCCAGTCACCTTCCTCCTCACACCTCAGA-GCAATCCCAGTGTTCCTGGGTCCAGATGTTCTTCCGGCTTTCCTCCCCGCACTGGGCCTTCCCTTCCACCCCATCTTCTCTGATCCTTCCTTTGATCCTTCCTTCTTCTCTACTCCTAGCCTTGTCTA-------GCTATTTTTCCTTCTCCAGGTCTTCCTCCTTCCCTTTCCAACTTTGCC--TCCTTTC-ACCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47077738 454 + 51301725 ctcccaggctcaagtgatcctcccacctcagcttcccaagcagctgggactacaggcacatgccaatcATGCctaacatgtttttttctttt--------------tggtagagatgggagtcacagtatgttgctcaggctagtctcaaactcctggcatcaagtgatcc-cccatgtaggcctcccaaagtgctgggattacagacatgggccactgcacccggccagcctCACCGTTCTTGTCTTCCTAGGCCAGTCACCTTCCTCCTCACACCTCAGA-GCAATCCCAGTGTT-CTGGGCACAGATGTTCTTCCAGCTTTCCTCCCCGCACTGGGccttcccttccaccccatcttctctgatccttcctttgatccttccttcttctctactcctAGCCTTGTCTA-------GCTATTTTTCCTTCTCCAggtcttcctccttccctttccaacTTTGCC--TCCTTTC-ACCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782918 445 + 50890351 ctcccaggctcaaatgatcctcccacctcagcttcccaagcagctgggactacaggcacatgccaatcatgcctaacatgtttttttcttgt--------------tggtagagatgggagtcacggtatgtcgctcaggctggtctcaaactgctggcatcaagtgatcc-cccatgtaggcctcccaaagtgctgggattacggacatgggccactgcacccagccAGCCTCACCGTTCGTGTCTTCCTAGGCCAGTCACCTTCCTCCTCACACCTCAGA-GCAATCCCAGTGTTCCTGGGTCCAGATGTTCTTTCAGCTTTCCTCCCCGCACTGGGCCTTCCCTTCCACCCCATCTTCTC------------TGATCCTTCCTTCTCCTCTACTCCTAGCCTTGTCTA-------GCTATTTTTCCTTCTCCAGGTCTTCCTCCTTCCCTTTCCAACTTTGCCCTCCTTTTC-ACCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45351565 453 + 49145316 ctcccaggctcaagtgatcctcccacctcaccctcccaagtagctgggactacaggcacgggccaaccaagccgacccttttttttttttttttttttttctttcctggtagagatgag-gtctcagtatgttgctcagggagatctcaagctcttggcctcaagtgaacctccctcctgggcctcccagagtgctgggattacaggcctgagccactgcacctggccATCCTCACTGTTCTAGTCCTGCCAGGCCGGTCGGCTTCCTCCTTATACCTCAGAGGTAATCCCAGTGTTCCTGGGTCCAGATGCTCTTCCGACTTTCCTCCCCTAACT-GGccttctcttccgccctctctt---------------tgacccctccctctcctctcctcccagccttctcca-------gtta-ctttccttctccaggtctt-ctccttccctttcCAACTTTGCC-TCCTTTTCTACCC- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19580313 235 - 122678785 CTTCGAAGCCAAAGTCTTCCTC-------------------------GAC---------------------CTTAATCTG--------------------------GGGGAGAGAAGGA-GCCA---------GCGTAAGCAGGCCTAGAAT--------------------CTCGAGAAGGCC-------------------CAG---------------------CAGCTTCACCATTC--AACCTCC--------TCAACTTCCTCTGTGCACCTGGGA-GAAATCCCAATGGTCCC--------------------------------------ACCTTCCCTTCCAC-CCATGTTCTC------------TGA-CCCTCCTGCTA-------CCCACCCACCCCCA-------GCT--------TCCTCCAGATCGCTCTCCTTCCTTTTCCATCCA------------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3620521 207 + 145441459 I a score=512570.000000 s hg38.chr19_GL949747v2_alt 82200 197 + 729520 AGCCTTTACCCCACTTTTTCCAACTA------CTTCCCTGCCTGATCCTAGG---CCTCCAACATGTCCTGGTTCACCTCCCTTCTCCAACTTTCCCCAGCCCTGGGCCCCTCGGGGTGCAGAACCAAAACCCAAGAGCCCTGAACCTAACTCAGCCCCAGCCCT------GGCCCCTCCCCTTGAGTCCCCC-CTCC---TTACCTGCACTGGCG s panTro4.chr19 59015653 197 + 63644993 AGCCTTTACCCCACTTTTTCCAACTA------CTTCCCTGCCTGATCCTAGG---TCTCCAACATGTCCTGGTTCACCTCCCTTCTCCAACTTTCCCCAGCCCTGGGCCCCTCGGGGTGCAGAACCAAAACCCAAGAGCCCTGAACCTAACTCAGCCCCAGCCCT------GGCCCCTCCCCTTGAGTCCCCC-CTCC---TTACCTGCACTGGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55892089 204 + 60714840 AGCCTTTACCCCACTTTTTCCAACTA------CTTCCCTGCCTGATCCTAGG---CCTCCAACATGTCCTGGTTCACCTCCCTTCTCCAACTTTCCCCAGCCCTGGGCCCCTCGGGGTGCAGAACCAAAACCCAAGAGCTCTGAACTTGActcagccccagccctggccccggcccctccccttgagtcccccgctcc---ttacctgcactagcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102657372 204 - 106955855 aGCCTTTACCCCACTTTTTCCAACTA------CTTCCCTGCCTGATCCTAGG---CCTCCAACACGTCCTGGTTCACCTCCCTTCTCCAACTTTCCCCAGCCCTGGGCCCCTCGGGGTGCAGAACCAAAACCCAAGAgccctgaacctgactcagccccagccctggccccggcccCTCCCCTTGAGTCTCCCCCTCC---TCACCTGCACTGGCG i nomLeu3.chr10 I 284 C 0 s rheMac3.chr19 59940830 202 + 64156825 AGCCTTTGCCCCACTTTTTCCAAATA------CTTCCCTGCCTGATCCTAGG---CCTCCAACACATCCTGGTT-ACCTCCTTTCTTCAACTTTCCCCAGCCCTGGACCCCTCAGGGTGCAGAACCAAAACCCAAGAGCCCTGAACCTGACTCAG-CCCAGCCCTGGCCCTAGCCCCTCCCCTTGAGTCCCCCCCTCC---TCACCTGCACCGGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54944780 202 + 59248254 AGCCTTTGCCCCACTTTTTCCAAATA------CTTCCCTGCCTGATCCTAGG---CCTCCAACACATCCTGGTT-ACCTCCTTTCTTCAACTTTCCCCAGCCCTGGACCCCTCAGGGTGCAGAACCAAAACCCAAGAGCCCTGAACCTGACTCAG-CCCAGCCCTGGCCCTAGCCCCTCCCCTTGAGTCCCCCCCTCC---TCACCTGCACCGGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47078192 208 + 51301725 AGCCTTTGCCCCACTTTTTCCAACTA------CTTCCCTGCCTGATCCTAGGCCTCCTCCAGCACATCCTGGTT-ACCTCCTTTCTTCAACTTCCCCCAGCCCTGGGCCCCTCAGGGTGCAGAACCAAAACCCAAGAGCCCTGAACCTGACTCGG-CCCAGCCCTGGCCCTAGCCCCTCCCCTTGAGTccccccccccccGTCACCTGCACCGGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46783363 203 + 50890351 AGCCTTTGCCCCACTTTTTCCAACTA------CTTCCCTGCCTGATCCTAGG---CCTCCAACACATCCTGGTT-ACCTCCTTTCTTCAACTTTCCCCAGCCCTGGGCCCCTCAGGGTGCAGAACCAAAACCCAAGAGCCCTGAACCTGACTTGGCCCCAGCCCTGGCCTCAGCCCCTCCCCTTGAGTCCCCCCCTCC---TCACCTCCACCGGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45352018 123 + 49145316 AGCCTTTGCCCCACTTTTTCCAGCTA------CCTCCCTGCCTGATCCTAGG---CTTCCAACACTTCCTGTTTCACCACCTTTCTCCAACTTG-CCCAGCC----------------------------CCCAAGAGCCCTGAACTTGATTCCG-CCCAGC------------------------------------------------------ i calJac3.chr22 C 0 C 0 s canFam3.chr1 19580548 158 - 122678785 AGCCCTCACCTGGCTTCTTCCAGCTCTTTATTCTTCCCTGCCCA-----------CCCCCACCTCTCCCAGCCCCACCTCCTTTCTCCAGTTGTCCCTtgccctgagctt---------------------------gtcctgagcct------------gccctgagcctgAATGCTCTAC--AAGGCCCAGCTCCC---ACAACACTGCTG--- i canFam3.chr1 C 0 C 0 e mm10.chr7 3620521 207 + 145441459 I a score=2615560.000000 s hg38.chr19_GL949747v2_alt 82397 761 + 729520 CCGGCTCTGGAGC----------------------------------------------------------CCCAGTCCCTCCCCTTGAGTTCCCGC-CTTC----CTCACCTGCACCGGGGCCAGCTCTGGAGTCAGCGCATTTCCTGCTCGGCGTCCATCCCGTGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCACCGGGGGCTGGGCTGCCGGGTTCTGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGTCTCTTTCTCTGGAGGCTCATTCTCCGCATTGCCTGGGGTGGGGGCATCCGTGCCCTGGCTGCCCTCATCCTGGCAGGCAGGAGGGGGAGGTAGGTGATGGGTGGGTCCTGA--------------GCTCCCAGT--TCCTGACCCTCCTGGAGGCCCAACACTCACCTCCAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCGTAGGAGTCCAGCACTCTCATGAGGAACCTGCTCAGGGGGAGAAGCCACC---AACGGAATAACTT-ATCTCCTAGCGGCTGGGGAAAAGGGCCACAGGATAGAGCTCAGCTCCCACTCCACTCAACGCCAAAGCTGTCc--------tggagccagacggtcctgagctctggcactggaggcctgggagccatgcc-cttgaccagccttgagacctcgagcaagacaaggcaaccattctgaggctgagtttcctgctctgc--aaacgaca--tgacaccctc-----ggctggatgttgcagcggtgacactgaagtagtgacaccagacgatttct----gta-----cttaatgtga-tgtcagc---acttagtaaacattcatatgtgagttataa-t s panTro4.chr19 59015850 761 + 63644993 CCAGCTCTGGAGC----------------------------------------------------------CCCAGTCCCTCCCCTTGAGTTCCCGC-CTTC----CTCACCTGCACCGGGGCCAGCTCTGGAGTCAGTGCATTTCCTGCTCGGCGTCCATCCCGTGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGGGCTGGGCTGCCGGGTTCTGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAATGTCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGGGCATCCGTGCCCTGGCTGCCCTCATCCTGGCAGGGAGGAGGGGGAGGTAGGTGATGGGTGGGTCCTGA--------------GCTCCCAGT--TCCTGACCCTCCTGGAGGCCCAACACTCACCTCCAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCGTAGGAGTCCAGCACTCTCATGAGGAACCTGCTCAGGGGGAGAAGCCACC---AACGGAATAACTT-ATCTCCTAGCGGCTGGGGAAAAGGGCCACAGGATAGAGCTCAGCTCCCACTCCACTCAACGCCAAAGCTGTCC--------tggagccagacggtcctgagctctggcattggaggcctgggagccatgcc-cttgaccagccttgagacctcaagcaagacaaggcgaccattctgaggctgagtttcctgctctgc--aaacgaca--tgacaccctc-----ggctggatgttgcagcggtgacactgaagtagtgacaccagacgatttct----gta-----cttaatgtga-tgtcagc---acttagtaaacattcaTATGTGAGTTATAA-T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55892293 819 + 60714840 ccagctctggagctccagtccctccccttgagtccctgcctcctcacctgcactggcaccagctctggagtcccagtcccTCCCCTTGAGTTCCCAC-CTTC----CTCACCTGCACTGGGGTCAGCTCTGGAGTCAGCGCATTTCCTGCTCGGCGTCCATCCCGTGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGGGCTGGGCTGCCAGGTTCTGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGGGCATCTGTGCCCTGGCTGCCCTCATCCTGGCAGGGAGGAGGGGGGGGTAGGTGATGGGTGGGTCCTGA--------------GCTCCCAGT--TCCTGACCCTGCTGGAGGCCCAACACTCACCTCCAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCATAGGAGTCCAGCACTCTCATGAGGAACCTGCTCAGGGGGAGAAGCCACC---AATGGAATAACTT-ACGTCCTATCAGCTGGGGAAAAGGGCCACAGAATCGAGCTCAGCTCCCACTCCACTCAACGCCAAAGCCGTCC--------tggacccagacggtcctgagctctggcattggaggcctgggagccatgcc-cttgaccagccttgagacctcgagccagacaaggcgaccattctgaggctgagtttcctgctctgc--aaacgaca--tgacaccctc-----ggctggatgttgcaatggtgacactgaagtagtgacaccagacgatttct----gta-----cttaatgtga-tgtcagc---acttagtaaacattcatatgtgagttgtaa-a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102657576 760 - 106955855 CCAGCTCTGGAGC----------------------------------------------------------CCCAGTCCCTCCCCTTGAGTTCCCAC-TTTC----CTCACCTGCACCGGGGCCAGCTCTGGAGTCAGCGCATTTCCTGCTCGGCGTCCATCTCGTGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGGGCTGGGCTGCCAGGTTCTGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGGGCATCTGTGCCCTGGCTGCCCTCATCCTGGCAGGGAGGAGGGGGAGGTAGGTGATGGGTGGGTCCTGA--------------GCTCCCAGT--TCCTTACCCTCCTGGAGGCCCAACACTCACCTCCAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCATAGGAGTCCAGCACTCTCATGAGGAACCTGCTCAGGGGCAGAAGCCACC---AATGGAATAACTT-ATCTCCTAGCAGCTGGGGAACAGGGCCACAGGATAGAGCTCAGCTCCCACTCCGCTCAGCGCCAAAGCTGGCC--------tggacccagacggtcctgagctctggcactggaggcctgggagccatgcc-cttgaccagccttgagacctcgagcaagacaaggcgaccattctgaggct--gtttcctgctctgc--aaacgaca--tgacaccctc-----ggctggatgttgcagtggtgacactgaagtagtgacaccagacgatttct----gta-----cttaacatga-tgtcagc---acttagtaaacattcatatgtgagttataatt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59941032 765 + 64156825 CCAGCTCTGGGGC----------------------------------------------------------CCCGGTCGCTCCCCTTGAGTCCCCCCACTTC----CTCACCTGCACTGAAGCCAGCTCTGGAGTCAGTGCAGTTCCCACTCGGCGTCCATCCCGCGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGCGCTGGGCTGCCAGGTTCCGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGAGCATCCGTGCCCTGGCTGCCCTCATCCTGGCGGGGAGGAGGGGGAGGTAGGTGATGGCTGCGTCCTGG--------------GCTCCCAGT--TCCTGACCCTCCTGGAGACCCAACACTCACCTCTAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCATAGGAGTCCAGCACCCTCATGAGGAACCTGCTCAGGGGGAGAAGCCACC---AATGGACTCAGTT-ACCTCCTAGCAGCT-GGGAAAAGGGCCACAAGATAGAGCTCAGCTCTCACCCCACTCAACACCAAAGCTGTCC--------TGGACGCAGACGGTCCTGAGCTCTGGCATTGGAGGCCTGGGAGCCACGCC-CTTGACCCGCCTTGAGACCTCAAGCAAGACAAGACGACCATTCTGAGGCTGAGTTTCCTGCTCTGC---AACGACG--TGAAACCCTCACCTGGGCTGGATGTTGCAGTGGTGACACCGAAGTAGTGACACCAGACGATTTCT----GTA-----CTTGCTGTGA-TATCGGC---ACTCAGTAAACATTGATATGTGAGTTATCA-T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54944982 765 + 59248254 CCAGCTCTGGGGC----------------------------------------------------------CCCGGTCGCTCCCCTTGAGTCCCCCCACTTC----CTCACCTGCACTGAAGCCAGCTCTGGAGTCAGTGCAGTTCCCACTCGGCGTCCATCCCGCGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGCGCTGGGCTGCCAGGTTCCGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGAGCATCCGTGCCCTGGCTGCCCTCATCCTGGCGGGGAGGAGGGGGAGGTAGGTGATGGCTGCGTCCTGG--------------GCTCCCAGT--TCCTGACCCTCCTGGAGACCCAACACTCACCTCTAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCATAGGAGTCCAGCACCCTCATGAGGAACCTGCTCAGGGGGAGAAGCCACC---AATGGACTCAGTT-ACCTCCTAGCAGCT-GGGAAAAGGGCCACAAGATAGAGCTCAGCTCTCACCCCACTCAACACCAAAGCTGTCc--------tggacccagacggtcctgagctctggcattggaggcctgggagccacgcc-cttgacccgccttgagacctcaagcaagacaagacgaccattctgaggctgagtttcctgctctgc---aaCGACG--TGAAACCCTCACCTGGGCTGGATGTTGCAGTGGTGACACCGAAGTAGTGACACCAGACGATTTCT----GTA-----CTTGCTGTGA-TATCGGC---ACTCAGTAAACATTGATATGTGAGTTATCA-T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47078400 766 + 51301725 CCAGCTCTGGGGC----------------------------------------------------------CCCGGTCGCTCCCCTTGAGTCCCCTCACTTC----CTCACCTGCACTGAAGCCAGCTCTGGAGTCAGCGCAGTCCCTGCTCGGCGTCCATCCCGCGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGCGCTGGGCTGCCAGGTTCTGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGAGCATCCGTGCCCTGGCTGCCCTCATCCTGGCGGGGAAGAGGGGGAGGTAGGTGATGGCTGCGTCCTGG--------------GCTCCCAGT--TCCTGACCCCCCTGGAGGCCCAACACTCACCTCTAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCATAGGAGTCCAGCACTCTCATGAGGAACCTGCTCAGGGGGAGAAGCCACC---AATGGACTAAGTT-ACCTCCTAGCAGCTGGGGAAAAGGGCCCCAGGATAGAGCTCAGCTCTCACCCTACTCAACACCAAAGCTGTCC--------TGGACCCAGACGGTCCTGAGCTCTGGCACTGGAGGCCTGGGAGCCACGCC-CTTGACCAGCCTTGAGACCTCCAGCAAGACAAGACGACCATTCTGAGGCTGAGTTTCCTGCTCTGC---AACGACA--TGAAACCCTCAACTGGGCTGGATGTCGCAGTGGTGACACTGAAGTAGTGACACCAGACGATTTCT----GTA-----CTTACTGTGA-TGTCGGC---ACTCAGTAAACGTTGATATGTGAGTTGTCA-T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46783566 758 + 50890351 CCAGCTCTGGGGC----------------------------------------------------------CCCGGTCCCTCCCCTTGAGTCCCCCGACTTC----CTCACCTGCACCGAAGCCAGCTCTGGAGTCAGCGCAGTTCCTGCTCGGCGTCCATCCCGCGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGCGCTGGGCTGCCAGGTTCTGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGAGCATCCGTGCCCTGGCTGCCCTCATCCTGGTGGGGAGGAGGGGGAGGTAGGTGAAGGCTGCGTCCTGG--------------GCTCCCAGT--TCCTGACCCTCCTGGAGGCCGAACACTCACCTCTAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCATAGGAGTCCAGCACTCTCATGAGGAACCTGCTC-GGGGGAGAAGCCACC---AATGGAGTAAGTT-ACCTCCTAGCAGCT-GGGGAAAGGGCCACAGGATAGAGCTCAGCTCTCACCCCACTCAACACCAAAGCTGTCC--------tggacccagacggtcctgagctc------tggaggcctgggagccacgcc-cttgaccagccttgagacctcaagcaagacaagacgaccattctgaggctgagtttccagctctgc---aaagaca--tgaaaccctcaactgggctggatgttgtagtggtgacactgaagtagtgacaccagacgatttct----gta-----cttattgtga-tgtcggt---acttagtaaacattcatatgtgagttatca-t i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45352141 709 + 49145316 -----------------------------------------------------------------------CCCAGTCCCTCCCCTTGAGTTTCCCC-CTTC----CTCACCTGCACTGGTGCCAGCTCTGGAGTCAGCGCAGTTCCTGCTCGACGTCCATCCCGTGGTACTCGCCTCCTCTTCCGCCCACTGGGCCCCTCGACGGGGACTGGGCTGCCAGGTTCTGGGGGTGCAGGAGTCCTTCTCGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTACCTGGGGTGGGAGCATCTGTGCCCTGGCTGCCCTCATCCTGGCAGGGAGGAGCAGGAGGTGGGTGATGG-TGTATCCTGG--------------GCTTCCAGT--GCCTGACCCTCCTGGAGACCCAGCACTCACCTCCAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCGTAGGAGTCCAGCACTCTCATGAGGAACCTGCTCAGGG--AGAAGCCACC---GATGGAATGAGTTAATCTCCTAGCAGTTGGGGAA---------------GAGCTCAGTTCCCGCTCCACTCGAAGCGAAAGCTGTCC--------TGGACCCGGGAGGTCCTGAGCTctggctttggaggcctgg---------------------------------agcgagacaaggcaaccattctgaggctgagtttcctgctctgc--agacgggc--tgacagccttgactgcactgggtgctgcagtggggacactgacgcagtgacaccagcggatttct----gtaaagtgcttcatgtgg-tatcggc---acttaggaaacgttcatatgggagttcGAt-t i calJac3.chr22 C 0 I 307 s mm10.chr7 3620728 682 + 145441459 CCAGCCCAGGATT----------------------------------------------------------CTCA---CCACGCCTTG-GCCCCAGC-CCTCGGCTCCCACCTGCACTGGGGCCAGTTCTGGAGTCAATGAAGCCCCCA------------CCCGTGGCGCCCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCAGGGGCTGGGCTGGTGGGGTCTAAGGTTGCAGTTGTCCTTTGGGATGGGGAAAGCCCCTCTTTCTCTGGAGGTTCATTCTCAGCATTGCCTGGGGTAGGGACATCTGTGCCTTGGCTGCCATCATCCTGGTAAGATGTAACATGGTGGCGGTTAAAGAC---TCCTGG--------------ATTCCCCATCCTCCCAACCTGCTTGGAGACC-AGAGCTCACCTCCAACACAATGGTGAACTGGCTATCTCGGTAGTCATCCCCGTAGGAGTCCAGCACCCTCATGAGGAACCTGTGTGGATGGAGATGCAGGC---ACTGAAA-ATCTT-ATCTTCTGA------GGGAGTACG--TAAAAGATA-AGTCCAGGTCTC------TTCAAT-CTAAAGTTCGCT--------TGAACTAGAAAGGTTTAGACCTCT-------GTAGCCTGAGCTC------------CCAGCCTGGGAACC------------AGTTGACC---------CCAAGTCTCCTACAC------AATGATAGGTGACATCCTTTACTGGGTTAGGTGCTGTGAAGGT-ATACTACA----------TAGACTATTCTCTAAAGTA-----CACAGTGTGATTGTTAGC---ATCTAGTAAACGTTCA------AATTGTAA-T i mm10.chr7 I 207 I 2 s canFam3.chr1 19580706 733 - 122678785 CAAAACCCAAGGC----------------------------------------------------------CCTGGT-----------------------------CCCACCTGTACCGGGGCTAGTTCTGGAGTGAGCACAGCTCCCGCTCGGCGTCCGTCCCGGGGTGCTCGCCGCCTCTTGCGTCCACTGGGCCCCTCCCCGGGGGTTGGGCTGCTGGGTTCTGGAGGTGCGGGTGTCCTTCGGGGTGGTGACAGCCCCTCTTTCTCTGGGGGCTCATTCTCAGCATTGCCGGGAGTGGGAGCATCTGTGCCCTGGCTGCCCTCGTCCTGGTGGGGAGAAG-GGGTGGCAGGTGAAGGCTGTGTCCTGGTGCCCTGTCCCCCCACACCCACC--CCCCTGCCTGCCAGGAGGCC--ATGCTCACCTCCAGGACTATGGTGAGCTGGCTGGCACGGTAGTCATCGCCATAAGCATCCAGCACTCTCATGAGGAACCTGCGTCCGGAGAGAGGCCATTGGGGAGGCACAACCTC-AGTATCTGGTGGTTGGAGAAAGGGGCGCCCG---ACAGCCCAGCCCCAGCTCA----GAAGCCAAGGCTGTCCCAGACCCATAAACCCAGAAGATTCAGAGCTGCCAAATCTGAGACCTGGTTGCCAAGTAGTTTGAGCAGCA-GGGGACATTGGGCCAGACCAGGGGACCTCTCTGCACCT--GTTTCCCGCTCTGTTGACAGGACA--CGACAGCCCTGAGTGGGTGGGCCACCTGAG-GGTGACACTGCA-------------------TCT----GGA---------GAGTGG-CATCTGCTGTGCTCAGCCCACGTTCTGGTGTCAGCTAT---- i canFam3.chr1 C 0 C 0 a score=38216.000000 s hg38.chr19_GL949747v2_alt 83158 17 + 729520 tTTTATTGATAACTGAA s panTro4.chr19 59016611 17 + 63644993 TTTTATTGATAACTGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55893112 17 + 60714840 ttttattGATAGCTGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102658336 17 - 106955855 ttttattGATAACTGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59941797 15 + 64156825 TTTTATTGATCACTG-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54945747 15 + 59248254 TTTTATTGATCACTG-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47079166 15 + 51301725 TTTTATTGATCACTG-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46784324 12 + 50890351 ttttattGATAA----- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45353157 17 + 49145316 TTTTTTTGATAACTGAA i calJac3.chr22 I 307 I 6 s mm10.chr7 3621412 17 + 145441459 TGGTAATGAAGACTGAA i mm10.chr7 I 2 I 2960 s canFam3.chr1 19581439 16 - 122678785 CTTTATTAGTAACTGA- i canFam3.chr1 C 0 C 0 a score=253793.000000 s hg38.chr19_GL949747v2_alt 83175 91 + 729520 GAGAGGGGAGTACAGAACGCTCCTCCTAATGACCTCACCTCTTATAAACACCCCCTTCTCTTTTTTCCCCAGCCCCTGCCTC-CAGAGTTCC s panTro4.chr19 59016628 91 + 63644993 GAGAGGGGAGTACAGAACGTTCCTCCTAATGACCTCACCTCTTATAAACACCCCCTTCTTTTCTTTCCCCAGCCCCTGCCTC-CACAGTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55893129 91 + 60714840 GAGAGGGGAGTACAGAACGCTCCTCCTAATGACCTCACCTCTTATAAACACCCTCTTCTCTTCTTTCCCCAGCCCCTGCCTC-CAGAGTTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102658353 91 - 106955855 GAGAGGGGAGTACAGAACGCTCCTCCTAATGACCTCACCTCTTATAAACACCCCCTTCTCTTCTTTCCGCAGCCCCTGCCTC-CAGAGTTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59941812 88 + 64156825 AAGAGGGGAGTGCAGAACG---CTCCTAATGACCTCACCTCTTATCAACACCCCCTTCTCTTCTTTCCCCAGCCCCTGCCTC-CAGAGATCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54945762 88 + 59248254 AAGAGGGGAGTGCAGAACG---CTCCTAATGACCTCACCTCTTATCAACACCCCCTTCTCTTCTTTCCCCAGCCCCTGCCTC-CAGAGATCC i macFas5.chr19 C 0 I 326 s papAnu2.chr19 47079181 88 + 51301725 AAGAGGGGAGTGCAGAACG---CTCCTAATGACCTCGCCTCTTATCAACAcccccttctcttctttccccagcccctgcctc-cagaagcct i papAnu2.chr19 C 0 I 327 s chlSab2.chr6 46784336 88 + 50890351 GAGAGGGGAGTGCAGAACG---CTCTTAATGACCTCGCCTCTTATCAACACCCCCTTCTCTTCTTTCCCCAGCCCCTGCCTC-CAGAGATCC i chlSab2.chr6 C 0 I 6 s calJac3.chr22 45353180 85 + 49145316 CAGAGGGGAGTGCAT-ACA---CTTCTGATGACCTTGCCTTTTATCAACACTGGCTTCTGTTTTT--CCCAGTCCCTGCCTC-CAGAGTTCC i calJac3.chr22 I 6 I 6 s canFam3.chr1 19581455 71 - 122678785 ---AGGGCAAGACAAAGAG---C--------------CCTCCTGCTGACATGACCTTCTCTGCTT-CCCTGGTCCCTGCTTCTCAGAGCTCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3621429 2960 + 145441459 I a score=79888.000000 s hg38.chr19_GL949747v2_alt 83266 48 + 729520 TTAAGGTTC-AATTGATGGA--ATGCCTCCTCTGCACCAGCACCTGGGC-AG s panTro4.chr19 59016719 48 + 63644993 TTAAGGTTC-AATTGATGGA--ATGCCTGCTCTGCACCAGCACCTGGGC-AG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55893220 49 + 60714840 TTAAAGTTCTAATTGATGGA--ACGCCTCCTCTGCACCAGCACCTGGAC-AG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102658444 51 - 106955855 TTAAAGTCCTAGTTGATGGAATATGCCTCCTGTGCACCAGCACCTGGGC-AG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59941900 20 + 64156825 TTAGttttttttttt--------tgttt------------------------ i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54946176 49 + 59248254 TTAAAGCTCTAATTGATGGG--ATGCTTCCCCCGCACCAGCGCCTGGGC-AG i macFas5.chr19 I 326 C 0 s papAnu2.chr19 47079596 49 + 51301725 TTAAAGCTCTAATTGATGGG--ATGCTTCCTCCGCACCAGCGCCTGGGC-AG i papAnu2.chr19 I 327 C 0 s chlSab2.chr6 46784430 49 + 50890351 TTAAAGCTCTAATTGATGGG--ATGCTTCCTCTGCGCCAGCGCCTGGGC-AG i chlSab2.chr6 I 6 C 0 s calJac3.chr22 45353271 50 + 49145316 TTAAAATTCTAATTGATGGA--ATGCTTCCTCTGCACCAGCGCCTGGACAAA i calJac3.chr22 I 6 C 0 s canFam3.chr1 19581526 31 - 122678785 ------------------GA--ATGCTATCTGGGGGCAAGCACCTGGGT-GG i canFam3.chr1 C 0 I 2773 e mm10.chr7 3621429 2960 + 145441459 I a score=602823.000000 s hg38.chr19_GL949747v2_alt 83314 241 + 729520 Gtttgttgttgttgttttgcgacggaatctcactctgtcacccaggctggagtgcagtggcgtgaatttggctcaccacaacctccacctccctggtaccagcgattctcctgcctcagcctcccgagtagctgggactacaggcgcctgccactacacccggctaatttttttgta---tttttagtagagacggagtttcaccgtgttagccaggatggtcccgatctcctgacctc--gtgat s panTro4.chr19 59016767 241 + 63644993 Gtttgttgttgttgttttgagacggaatctcactctgtcgcccaggctggagtgcagtggcgtgaatttggctcaccacaacctccacctccctggtaccagcgattttcctgcctcggcctcccgagtagctgggactacaggcgcccgccactacgcccggctaatttttttgta---tttttggtagagacggagtttcaccgtgttagccaggatggtcccgatctcctgacctc--gtgat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55893269 241 + 60714840 Gtttgttgttgttgttttgagacagaatctcactctgttgcccaggctggagtgcagtggcgtgatcttggctcaccacaacctccacctccctggttccagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcccgccactacgcccggctaatttttttgta---tttttagtagagacggagtttcaccgtgttagccagaatggtctcgatctcctgacctc--gtgat i ponAbe2.chr19 C 0 I 287 s nomLeu3.chr10 102658495 238 - 106955855 GT---TTGTTGTGGttttgagacggaatctcactctgttgcccaggctggagtgcagtggcgtgatctcggctcaccacaacctccacctccctggttccagcgattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccactacgcttggctaatttttttgta---tttttagtagagacagagtttcaccatgttagccaggatggtctggatctcctgacctc--atgat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59941920 236 + 64156825 -t------ttgtttttttgagacagagtctcgctctgtcgcccaggctggagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcatgccattctcctgcctcagcctcccgagtagctgggactacaggtgcccgccacctcacccggctag-ttttttgtattttttttagtagagacggggtttcactgtgttagccaggatgctctcgatctcctgacctc--gtgat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54946225 235 + 59248254 Gt------ttgttgttttgaggtggaatctcattctgttgcccaggctggagtgcagtggtgtgatctcggctcaccacaacctccacctcccgggttcaagtgattctcctgcgtcagcctcccgagtagctgggattacaagcacctgcaaccatgcccagctaa--tttttgta---tttttagtagagacagggtttcaccgtgttggccaggctggtcttgaactcctgacctcaggtgat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47079645 235 + 51301725 Gt------ttgttgttttgaggtggaatctcattttgttgcccaggctggagtgcagtggtgtgatctcggctcaccacaacctccacctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggaatacaagcacctgcaaccacccccagctaa--tttttgta---tttttagtagagacagggtttccccgtgttggccaggctggtcttgaactcctgacctcaggtgat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46784479 238 + 50890351 Gt---ttgttgttgttttgaggtggagtctcattctgttgcccagactggagggcagtggcgtgatctcggctcaccacaacctccacctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaagcacctgcaaccatgcccagctaa--tttttgta---tttttagtagagacagggtttcaccgtgttggccaggctggtcttgaactcctgacctcaggtgat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45353321 231 + 49145316 Gttttttgtcgt--ttttgagacgaagtctcgctttgtctcccaggctggagtgcaatggcgcaatcttggctcacccccacctctgcctcctgggttgaagcgattctcctgcctcagcctcccaagtagctgggatgacaggtgcctg--------cctagctaa--tgtttgtg---tttttagtagagacgggttttccccatgttggccaggctgctattgaactcctgacctcaggtgag i calJac3.chr22 C 0 C 0 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I a score=173191.000000 s hg38.chr19_GL949747v2_alt 83555 61 + 729520 ccgcctgcctcggcctcccaaagtgctgggattacaggcatgatgagccactgcgcccggc s panTro4.chr19 59017008 61 + 63644993 ccgcctgcctcggcctcccaaagtgctgggattacaggcgtgatgagccactgcgcccggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55893797 58 + 60714840 ccgcctgcctcggcctcccaaagtgctaggattacaggcg---gaagccaccgtgcccagc i ponAbe2.chr19 I 287 C 0 s nomLeu3.chr10 102658733 58 - 106955855 cctcctgcctcggcctcccaaagtgctgggattacaagcg---tgagccactgcgcccggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59942156 58 + 64156825 ccgcctgtctcggcctcccaaagtgctgggattacaggct---tgagccaccgcgcccggc i rheMac3.chr19 C 0 I 2123 s macFas5.chr19 54946460 58 + 59248254 ccgcctgcctcggcctcccaaagtgctgggattacaggca---tgagccaccgcgcccggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47079880 58 + 51301725 ccgcccgcctcggcctcccaacgtgctgggattacaggtg---tgagccaccgcgcccggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46784717 58 + 50890351 ccgcctgcctcggcctcccaaagtgctgggattacaggca---tgagccaccgcgcccggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45353552 58 + 49145316 ccacctgcctcggcctcccaaagtgctcagattacaggcg---tgagccaccgtgcccggc i calJac3.chr22 C 0 C 0 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I a score=2800.000000 s hg38.chr19_GL949747v2_alt 83616 1 + 729520 c s panTro4.chr19 59017069 1 + 63644993 c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55893855 1 + 60714840 c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102658791 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54946518 1 + 59248254 c i macFas5.chr19 C 0 I 1781 s papAnu2.chr19 47079938 1 + 51301725 c i papAnu2.chr19 C 0 I 2426 s chlSab2.chr6 46784775 1 + 50890351 c i chlSab2.chr6 C 0 I 1495 s calJac3.chr22 45353610 1 + 49145316 c i calJac3.chr22 C 0 I 1458 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I e rheMac3.chr19 59942214 2123 + 64156825 I a score=964957.000000 s hg38.chr19_GL949747v2_alt 83617 597 + 729520 TATTtcaacttaagtgaaaatctcacctgtggccagcggctaccgtgctggacagcacagGTACGGACAGAGgaaccctgggagccgcaggtttcagcttt-----ggggagggaggatgaactagcaaaggcagccaagaaggaacagccggaaaggcaggagaccccaggttgctgggtgcccaggatggcaagaatgggctccagggaagagcacatagccctgggccactgtgccgagcctgagccaaggactgagatgagaactgtggttgactcagcaacgtggagccattCCTACAAAACTTGCTCCAGTTTTGCTGGTACAGGGACACTGCGAGTGGCAGGGGCAGCAGCCACCTGGGCAGGTTCTGTGGAGACACACAgtgggaagctctgagctcagctcaccacctgcaagctccgac--aaccctgccgcagcctcatgatattggtgctgcccttagttgataggaaacagctcagagaagggacactgcttgcttagagtcacacagc--------aaaaaaaaaagaaaatacttgcagtcaggtctgtgctcgtgtgccttccatcctgctgttccctcccttcagGGGGAGGAGG s panTro4.chr19 59017070 601 + 63644993 TATTTCAACTTAAGTGAAAATCTCACCTGTGGCCGGCGGCTACCGTGCTGGACAGCACAGGTACGGACAGAGgaaccctgggagccgcaggtttcagcttt-----ggggagggaggatgaactagcaaaggcagccaagaaggaacagccggaaaggcaggagaccccaggctgctgggtgcccaggatggcaagaatgggctccagggaagagcacatagccctgggccactgcgccgagcctgagccaaggactgagatgagaactgtggttgactcagcaacgtggagccattCCTACAAAGCTTGCTCCAGTTTTGCTGGTACAGGGACACTGTGAGTGGCAGGGGCAGCAGCCACCTGGGCAGCTTCTGTGGAGACGCACAgtgggaagctctgagctcagctcaccacctgcaagctctgac--aaccctgccgcagcctcatgatattggtgctgcccttagttgataggaaacagctcagagaagggacactgcttgcttagagtcacacagc----aaaaaaaaaaaaaaaaaaaaaattgcagccaggtctgTGCTTGTGTGCCTTCCATCCTGCTGTTCCCTCCCTTCAGGGGGAGGAGG i panTro4.chr19 C 0 I 115 s ponAbe2.chr19 55893856 594 + 60714840 TATTTCAACTTAAGTGAAAATCTCACCTGTGGCCGGCGGCTACCGTGCTGGACAGCACAGGTGC-GACAGAGgaaccctgggagccgcaggtttcagcttt-----ggggagggaggatgaactagcaaaggcggccaagaaggaacagccggaaaggcaggagaccccaggatgctgggtgcccaggatggcaagaatgggctccagggaagagcacatagccctgggccactgcaccgagcctgagccaaggactgagatgagaactgtggttgatgcaacaacgtggagccattCCTACAAAGCTTGCTCCAATGTTGATGGGACAGGGACACTGTGAGTGGCAGGGGCAGCACCCACCTGGGCAGGTTCTGTGGAGACACACAgtgggaagctctgagctcagctcaccacctgcaagctccggcttaaccccgctgcagcctcatgatattggtgctgcccttagttgataggaaacagctcagagaagggacactgcttgcttagagtcataccgc------------aaaaaaaaaaaaacttgcagccaggtctgTGCTTGTGTGCCTTCCATCCTGCTGTTCCCTCCCTTCAGGGGGAGGAGG i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 102658792 591 - 106955855 TATTTCAACTTAAGTGAAAATCTCACCCGTGGCCGGCGGCTACCGTGCTGGACAGCACAGGTGCGGACACAGgaaccctgggagccgcaggtttcagctttgcggaggggagggaggatgaactagcaaaggcggccaagaaagaacagccggaaaggcaggagaccccaggctgctgggtgcccaggatggcaagaatgggctccagggaagagcacgtagccctgggccactgcgccg-----------aggaccgagatgagaactgtggttga--cagcaatgtggagccattCCTACAAAGCTTGCTCCAAGTTTGCTGGGACAGGGACACT--GAGTGGCAGGGGCAGCAGCCACCTGGGCAGGTTCTGTGGAGACGCACAGTGGGAAGCTCTGAGCTCAGCTCACCACCTGCAAGCTTCGGCTTAACCCCGCCGCAGCCTCATGATATTGGTGCTGCCCTTAGTTGATAGGAAACAGCTCAGAGAA-GGACACTGCTTGCTT--AGTCACACCGC---aaaaaaaaaaaaacacaaaaaaCTTGCAGCCAGGTCTGTGCTCATGTGCTTTCCATCCTGCTGTTCCCTCCCTTCAGGGGGAGGAGC i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 59944337 568 + 64156825 tatttcaacttaagtgaaaatctcacccgtggccagcggctaccgtgctggacagcacagGTGCGGACAGAGgaaccctgggagccgcaggtttcagctttg----gggaaaggaggatgaactagcaaaggcggccaggaaggaacagcctgaaaggcaggagaccccaggctgccgggtgaccaggatggcaagaatgggctccagggaagagcacataaccctgggtcactgcgccgagcctgagccgaggaccgagatgagaaccgtggttgactcagcaaggtggagCCCTTCCTACCAAGCTTGCTCCCATTTTGCTGGGACAGGGACACTGTGAGTGGCAGGGGCAGCAGGCACCGGGGCAGGTTTTGTGGAGATGCACAGTGGGAAGCTCTGGCCT---------------------------AAccccgccacaacctcatgatactggcactgcccttagttgataggaaacagctcagagaagggacactgcttgcttagagtcacacCACaaaaaaaaaaaaaaaaaaaaaaaaaCTTGCA-------------TTTTGTGCCTTCCATCGTGCTGTTCCCTCCCTTCAGGAGAAGCAGC i rheMac3.chr19 I 2123 I 1 s macFas5.chr19 54948300 564 + 59248254 tatttcaacttaagtgaaaatctcacccgtggccagcggctaccgtgctggacagcacagGTGCGGACAGAGgaaccctgggagccgcaggtttcagctttg----gggaaaggaggatgaactagcaaaggcggccaggaaggaacagcctgaaaggcaggagaccccaggctgccgggtgaccaggatggcaagaatgggctccagggaagagcacataaccctgggtcactgcgccgagcctgagccgaggaccgagatgagaaccgtggttgactcagcaaggtggagCCCTTCCTACCAAGCTTGCTCCCATTTTgctgggacagggacactgtgagtggcaggggcagcaggcaccggggcaggTTTTGTGGAGATGCACAGTGGGAAGCTCCGGCCT---------------------------AACCCCGCCACAACCTCATGATACTGGCACTGCCCTTAGTTGATAGGAAACAGCTCAGAGAAGGGACACTGCTTGCTTAGAGTCACACCAC----aaaaaaaaaaaaaaaaaaaaaCTTGCA-------------TTTTGTGCCTTCCATCGTGCTGTTCCCTCCCTTCAGGAGAAGCAGC i macFas5.chr19 I 1781 I 1 s papAnu2.chr19 47082365 562 + 51301725 TATTTCAACTTAGGTGAAAATCTCACCCGTGGCCGGCGGCTACCGTGCTGGACAGCACAGGTGCGGACAGAGGAACCCTGGGAGCCGCAGGTTTCAGCTTTG----GGGAAAGGAGGATGAACTAGCAAAGGCGGCCAAGAAGGAACAGCCTGAAAGGCAGGAGACCCCAGGCTGCTGGGTGACCAGGATGGCAAGAATGGGCTCCAGGGAAGAGCACGTAGCCCTGGGTCACTGCGCCGAGCCTGAGCCGAGGACCGAGATGAGAACCGTGGTTGACTCAGCAACGTGGAGCCCTTCCTACCAAGCTTGCTCCCATTTTGCTGGGACAGGGACACTGTGAGTGGCAGGGGCAGCAGTCACCGGGGCAGGTTTTGTGGAGATGCACCGTGGGAAGCTCCGGCTT---------------------------AACCCCGCTGCACCCTCATGATACTGGCACTGCCCTTAGTTGACAGGAAACAGCTCAGAGAAGGGACACTGCTTGCTTAGAGTCacaccgc---aaaaaaaaaaaaaaaaaaaaaaattgca-------------ttttgtgCCTTCCATCGTGCTGTTCCCTCCCTTCAGG---AGCAGC i papAnu2.chr19 I 2426 I 1 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I e calJac3.chr22 45353611 1458 + 49145316 I e chlSab2.chr6 46784776 1495 + 50890351 I a score=118512.000000 s hg38.chr19_GL949747v2_alt 84214 55 + 729520 CCCTCCACCCGGCCCTCCCTCAGTCC---CAGTGCTCAGCCCTCTCCACCCGGCCCTC s panTro4.chr19 59017786 55 + 63644993 ccctccacccgcccctccctcagtcc---cagtgctcagccccttccacccgcccctc i panTro4.chr19 I 115 C 0 s ponAbe2.chr19 55894451 55 + 60714840 CCCTCCACCCGGCCCTCCCTCAGTCC---CAGTGCTCAGCCCCCTCCACCCGGCCCTC i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 102659384 55 - 106955855 CCCTCCACCCCGCCCTCCCTCAGTCC---CAGCGCGCAGCCCCCTCCACCCCCCCCTC i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 59944906 55 + 64156825 CCCTCCAGCCGGCCCTCCCTCAGTCC---CGGCGCGCAGCCCCCTGCACCCGGCCCTC i rheMac3.chr19 I 1 C 0 s macFas5.chr19 54948865 55 + 59248254 CCTTCCAGCCGGCCCTCCCTCAGTCC---CGGCGCGCAGCCCCCTGCACCCGGCCCTC i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47082928 58 + 51301725 CCCTCCAGCTGGCCCTCCCTCAGTCTCGGCGGCGCGCAGCCCCCTCCAGCCGGCCCTC i papAnu2.chr19 I 1 I 7 s chlSab2.chr6 46786271 55 + 50890351 CCCTCCAGCCGGCCCTCCCTCAGTCC---CGGGGCGCAGCCCCCTCCAGCCGGCCCTC i chlSab2.chr6 I 1495 I 7 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I e calJac3.chr22 45353611 1458 + 49145316 I a score=54144.000000 s hg38.chr19_GL949747v2_alt 84269 31 + 729520 CCTCAGT-CCCAGCG--------------------------------------CACAGCCCCTTCCACCC s panTro4.chr19 59017841 31 + 63644993 cctcagt-cccagtg--------------------------------------ctcagccccttccaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894506 69 + 60714840 CCTCAGT-CCCAGTGCTCAGCCCTCTCCACCCGGCCGTCCCTCAGTCTGAGCACACAGCCCCCTCCACCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659439 32 - 106955855 CCTCAGTCCCCAGCG--------------------------------------CGCAGCCCCCTCCACCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59944961 31 + 64156825 CCTCAGT-CCCAGCA--------------------------------------CGCAGCCCCCTCCAGCC i rheMac3.chr19 C 0 I 25 s macFas5.chr19 54948920 31 + 59248254 CCTCAGT-CCCAGCG--------------------------------------CGCAGCCCCCTCCAGCC i macFas5.chr19 C 0 I 25 s papAnu2.chr19 47082993 31 + 51301725 CCTCAGT-GCTGGCG--------------------------------------CGCAGCCCCCTGCACCC i papAnu2.chr19 I 7 T 38 s chlSab2.chr6 46786333 31 + 50890351 CCTCAGT-CCCGGGG--------------------------------------CGCAGCCCCCTCCAGCC i chlSab2.chr6 I 7 C 0 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I e calJac3.chr22 45353611 1458 + 49145316 I a score=27029.000000 s hg38.chr19_GL949747v2_alt 84300 11 + 729520 GGCCCTCCCTC s panTro4.chr19 59017872 11 + 63644993 ggccctccctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894575 11 + 60714840 AGCCCTCCTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659471 11 - 106955855 CGCCCTCCCTC i nomLeu3.chr10 C 0 T 39 s rheMac3.chr19 59945017 11 + 64156825 GGCCCTCCCTC i rheMac3.chr19 I 25 C 0 s macFas5.chr19 54948976 11 + 59248254 GGCCCTCCCTC i macFas5.chr19 I 25 C 0 s papAnu2.chr19 47082986 11 + 51301725 GGCCCTCCCTC i papAnu2.chr19 T 38 C 0 s chlSab2.chr6 46786364 11 + 50890351 GGCCCTCCCTC i chlSab2.chr6 C 0 C 0 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I e calJac3.chr22 45353611 1458 + 49145316 I a score=14606.000000 s hg38.chr19_GL949747v2_alt 84311 12 + 729520 AGT-CCCAGTGCT s panTro4.chr19 59017883 12 + 63644993 agt-cccagtgct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894586 12 + 60714840 AGT-CCGAGCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659443 13 - 106955855 AGTCCCCAGCGCG i nomLeu3.chr10 T 39 C 0 s rheMac3.chr19 59945028 12 + 64156825 AGT-CCTGGCGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54948987 12 + 59248254 AGT-CCTGGCGCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47082997 12 + 51301725 AGT-GCTGGCGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786375 12 + 50890351 AGT-CCCGGGGCG i chlSab2.chr6 C 0 C 0 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I e calJac3.chr22 45353611 1458 + 49145316 I a score=26184.000000 s hg38.chr19_GL949747v2_alt 84323 12 + 729520 CAGCCCTCTCCA s panTro4.chr19 59017895 12 + 63644993 cagccccttcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894598 12 + 60714840 CAGTCCCCTCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659456 12 - 106955855 CAGCCCCCTCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59945040 12 + 64156825 CAGTCCCCTGGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54948999 12 + 59248254 CAGTCCCCTGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083009 12 + 51301725 CAGCCCCCTGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786387 12 + 50890351 CAGCCCCCTGCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45355069 12 + 49145316 CAACCCACTCTA i calJac3.chr22 I 1458 C 0 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I a score=39653.000000 s hg38.chr19_GL949747v2_alt 84335 13 + 729520 CCCGGCCCTCCCT- s panTro4.chr19 59017907 13 + 63644993 cccggccctccct- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894610 13 + 60714840 CCCGGCCCTCCCT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659468 13 - 106955855 CCCCGCCCTCCCT- i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 59945052 13 + 64156825 CCCGGCCCTCCCT- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54949011 13 + 59248254 CCCGGCCCTCCCT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083021 13 + 51301725 CCCGGCCCTCCCT- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786399 13 + 50890351 ACCGGCCGTCCCT- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45355081 13 + 49145316 CCTGGCCCTCCCT- i calJac3.chr22 C 0 C 0 s mm10.chr7 3624389 14 + 145441459 CCTACCCCTCACCC i mm10.chr7 I 2960 C 0 e canFam3.chr1 19581557 2773 - 122678785 I a score=3600.000000 s hg38.chr19_GL949747v2_alt 84348 1 + 729520 C s panTro4.chr19 59017920 1 + 63644993 c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894623 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59945065 1 + 64156825 C i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54949024 1 + 59248254 C i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083034 1 + 51301725 C i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786412 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45355094 1 + 49145316 C i calJac3.chr22 C 0 C 0 s mm10.chr7 3624403 1 + 145441459 C i mm10.chr7 C 0 C 0 e canFam3.chr1 19581557 2773 - 122678785 I e nomLeu3.chr10 102659481 1 - 106955855 I a score=262629.000000 s hg38.chr19_GL949747v2_alt 84349 99 + 729520 AGTCCCAGTGCTCAGCCCTC--TCCTCCAACACCGAATCCCACTCTTCCTCCTTGTTTGCCTCAGCCCCCGGCCCTCATCTCCGG---CTTCTCCTTGTGGCTT s panTro4.chr19 59017921 99 + 63644993 AGTCCCAGTGCTCAGCCCTC--TCCTCCAACACCGAATCCCACTCTTCCTCCTTGTTTGCCTCAGCCCCTGGCCCTCATCTCCGG---CTTCTCCTTGTGGCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894624 95 + 60714840 AGTCCCACTGCTCAGCCCTC--TGCTGCAAGACCAAATCCCACTCTT----CTTGTTTGCCTCAGCCCCCGGCCCTCATCTCCAG---CTTCTCCTTGTGGCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659482 99 - 106955855 AGTCCCAGCGCGCAGCCCTC--TCCTCCAAGACCGAATCCCACTCTTCCTCCTTGTTTGCCTCAGCCCCCGGCCCTCATCTCCAG---CTTCTCCTTGTGGCTT i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 59945066 99 + 64156825 AGTCCTAGTGCTCAGCTCTC--TCCTCCAAGACCGAA-CGCACTCTTCCTCC--GTTTGCCTCAGGCCCCGGCCCTCATCTCCTGCCTCTCCTCCTTGTGGCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54949025 99 + 59248254 AGTCTTAGTGCTCAGCTCTC--TCCTCCAAGACCGAA-CGCACTCTTCCTCC--GTTTGCCTCAGGCCCCGGCCCTCATCTCCTGCCTCTCCTCCTTGTGGCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083035 99 + 51301725 AGTCCTAGTGCTCAGCTCTC--TCCTCCAAGACCGAA-CACACTCTTCCCCC--GTTTGCCTCAGGCCCTGGCCCTcatctcctgcctctcctccttGTGGCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786413 99 + 50890351 AGTCCTAGTGCTCAGCTCTC--TCCTCCAAGACCGAA-CGCACTCTTCCTCC--GTTTGCCTCAGCCCCCGGCCCTCATCTCCTGCCTCTCCTCCTTGTGGCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45355095 100 + 49145316 AGTCCCAGTGCTCAGCGCTCCTCCCTCCAAGACCGAATTCCACTCTTCCT----GCTTGCCTCAGCCCCAGGCCCTCATCTCCAGGCTCTCTTCCTTGTGACTT i calJac3.chr22 C 0 C 0 s mm10.chr7 3624404 93 + 145441459 AGGCCCAGGGC-CAGCTCTT--CATTCCATGACCCAGTGCTACTTCTCC-----ACTTCTCTCA-CTCTGGGCCCTTCTCCTCAG--TTTTGTCCCCGTGCTTT i mm10.chr7 C 0 C 0 e canFam3.chr1 19581557 2773 - 122678785 I a score=658438.000000 s hg38.chr19_GL949747v2_alt 84448 184 + 729520 GTGAGGGTTGGGTGGATGTGGAAGT-GGG----AGAGAC---AGAGGGGCTGGG---AGCATTTGGGAGC--TGAGGCTCACAGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCCGTTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTATGGGGTGGGAAA--- s panTro4.chr19 59018020 184 + 63644993 GTGAGGGTTGGGTGGATGTGGGAGT-GGG----AGAGAC---AGAGGGGCTGGG---AGCATTTGGGAGC--TGAGGCTCACGGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCCGTTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTATGGGGTGGGAAA--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894719 175 + 60714840 GT---------GTGGATGTGGGAGT-GGG----AGAGAC---AGAGCGGCTGGG---AGCACTTGGGAGC--TGAGGCTCACGGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCCGTTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGGAAA--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659581 179 - 106955855 GTGAGGGTTGGGTGGATGTGGGAGT-GGG----AGAGAC-------GGGCTGGT---TGCGTTTGGGAGC--TGAGGCTCACGGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCCGTTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGG-AA--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59945165 185 + 64156825 GTGAGGGTTGGGTGGACGTGGGAGTGGGG----AGAGAC--CAGAGGGACTGGG---GGTGTTTGGGAGC--CGGGGCTTAGGGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCCGCTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGG-AA--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54949124 185 + 59248254 GTGAGGGTTGGGCGGACGTGGGAGTGGGG----AGAGAC--CAGAGGGACTGGG---GGTGTCTGGGAGC--CGGGGCTTAGGGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCCGCTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGG-AA--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083134 185 + 51301725 GTGAGGGTTGGGCGGacgtgggagtgggg----agagac--cAGAGGGACTGGG---GGTGTTTGGGAGC--CGAGGCTTAGGGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCcgctcctgctgcagcctccgaGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGG-AA--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786512 185 + 50890351 GTGAGGGTTGGGCGGACGTGGGAGTGGGG----AGAGAC--CAGAGGGACTGGG---GGTGTTTGGGAGC--CGAGGCTTAGGGGCCCAG---AGGGGACGGTGAAGGGGTTACCTCCGCTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGG-AA--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45355195 186 + 49145316 GTGAGGGTTGGGTGGTCATGGGAGTGGGG----AGACAC--GATAGCGGGTGAG---AGTGTCTGGGAGC--TGAAGCTCACAGGCCCAG---TGGAGGCACAGAAGGGGTTACCTCCTCTCCTGCTGTAGCCTCCGAGTGATCCTCTGCACTTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGGAAA--- i calJac3.chr22 C 0 C 0 s mm10.chr7 3624497 187 + 145441459 ATGAAGGCCAGGAAGACGGGAGATAATGGCACAAAGGGT--GAAAGGTGGTGGA---AATATGTGGGAGCAAAGGGGCT---GGGCCCAC---AGAGTATACAGAATGG--TACCTGCGCTCCTGCTGGAGTCTCCGAGTTATCCTTTGCACCTGATGGAGCCTGTTCAAGACTCGCTCATTCACCTGCAAGGAGGCAGA--- i mm10.chr7 C 0 I 2191 s canFam3.chr1 19584330 196 - 122678785 GTGAGGCCTGCACAGACACGAAGGAGGCA----AGAATCGCCAGAGGTGGTAGAAACAGCAGCTGGGAGC--AGAGGCCCG-GGGCCCAGGGAGGGGGGCGTGCAGGGGCTTACCTCCGCTCCTGCTGCAGTCTCCGTGTTATCCTTTGCACCTGATGAAGTCTGTTCAGGACCCGCTCATTCACCTGCAGGGAGCCAGAAGG i canFam3.chr1 I 2773 C 0 a score=908721.000000 s hg38.chr19_GL949747v2_alt 84632 307 + 729520 CGCCCATCAGCTGGATCCCACGGCTCCCGTTCATTTGTTTAACGGATGTTTAATGGGGCACGCACTAAACTCT----------GGAGACTGGCCAAAGACCATCCCGTGGCCTGAGGTC-CTTCCACCTTCCCATCCCTCCGGCTCCCctctcaccatgccacagtcctgagtgccctccagt---gggggcctt-ccgcgtgctgttcctctacctggaccctctccccagtcatccgcacaacttactccccactc---caagtcttaggtcaactgttacctgctcagagag----cctgaacctcccattaagtcgaaacacacc s panTro4.chr19 59018204 307 + 63644993 CTCCCATCAGCTGGATCCCACGACTCCCGTTCATTTGTTTAACGGATGTTTAATGGGGCACGCACTAAACTCT----------GGAGACTGGCCAAAGACCATCCCGTGGCCTGAGGTC-CTTCCACCTTCCCATCCCTCCAGCTCCCctctcaccatgccacagtcctgagtgccctccagt---gggggcctt-ccgcatgctgttcctctacctggaccctctccccagtcatccgcacaactcactccccactc---caagtcttaggtcaactgttacctgctcagagag----cctgaacctcccattaagtcgaaacacacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894894 309 + 60714840 CTCCCATCAGCTGGATCCCACGGCTCCCGTTCATTTGTTTAACGGATGTTTAATGGGGCACGCACTAAACTCTGG--------GGAGACTGGCCAAAGACCATCCCGTGGCCTGAGGTC-CTTCCACCTTCCCATCCTACCGGCTCCCctctcaccatgccacagtcctgagtgccctccagt---gggggcctt-ccgcatgctgttcctctacctggaccctctccccagccatccgcacaactcactctccactc---caagtcttaggtcaactgttacctgctcagagag----cccgaacgtcccattaagtcgaaacacacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659760 304 - 106955855 CTCCCATTAGCTGGATCCCACGGCTCCCGTTCATTTGTTTAAGGGATGTTTAATGGGGCACGCACTAACCTCTGG--------GGAGATTGGCCAAAGACCATCCCGTGGCCTGAGGTC-CTTCCACCTTCCCATCCCTCCGGCTCCCCTCTCACCATGCCACAGTCCTGAGTGCCCTCCAGT---GGgggcctt-ccgcatgctgttcctctccctggac---ctccccagccatcctcacaactcactccccactc---caagtc--aggtcaactgttacctgctcagagag----cccGAACCTCCCATTAAGTCGAAACACACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59945350 309 + 64156825 CTCCCATCAGCTGGATCCCACGGCTCCCGTTCATTTGTTCAACGGATGTTTAATGGGGTACGTACTAGGCTCCGG--------GGAGACTGGTCAAAGACCATCGTGTGGGCTGAGGtc-cttccaccttcccctccctccggctcccctctcaccatgccacagtcctgagtgccctcccgt---gggggcctc-ccgcatgctgttcctctacctggaccctctccccagccgtccatacggctcactccccactc---caagtcttaagtcaactgttacctgctcagagac----cccgaacctcccattaagtcgaaacacacc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54949309 309 + 59248254 CTCCCATCAGCTGGATCCCACGGCTCCCGTTCATTTGTTCAACGGATGTTTAATGGGGTATGTACTAGGCTCCGG--------GGAGACTGGTCAAAGACCATCGTGTGGGCTGAGGTC-CTTCCACCTTCCCCTCCCTCCGGCTCCCctctcaccatgccacagtcctgagtgccctcccgt---gggggcctc-ccgcatgctgttcctctacctggaccctctccccagccgtccatacggctcactccccactc---caagtcttaagtcaactgttacctgctcagagac----cccgaacctcccattaagtcgaaacacacc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083319 309 + 51301725 CTCCCATCAGCTGGATCCCACGGCTCCCGTTCATTTGTTCAACGGATGTTTAATGGGGCACGTACTAGGCTCCGG--------GGAGACTGGTCAAAGACCATCGTGTGGGCTGAGGTC-CTtccaccttcccctccctccGGCTCCCCTCTCACCATGCCACAGTCCTGAGTGCTCTCCTGT---GGGGGCCTT-CGGCATGCTGTTCCTCTACCTGGACCCTCTCCCCAGCCGTCCATACGGCTCACTCCCCACTC---CAAGTCTTAAGTCAACTGTTACCTGCTCAGAGGC----CCCAAACCTCCCATTAAGTCGAAACacacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786697 309 + 50890351 CTCCCATCAGCTGGATCCCACGGCTCCCGTTCATTTGTTCAACGGATGTTTAATGGGGCACGTACTAGGCTCCGG--------GGAGACTGGTCAAAGACCATCGTGTGGGCTGAGGTC-CTTCCACCTTCCCCTCCCTCCGGCTCCCCTGTCACcatgccacagtcctgagtgccctcccgt---gggggcctt-ccgcatgctgttcctctacctggaccctctccccagccgtccatacggctcactccccactc---caagtcttaagtcaactgttacctgctcagagac----cccgaacctcccattaagtcgaaacacacc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45355381 311 + 49145316 CTCACATGAGCTGGCTCCCACTCCTCCCATTCATTTGTTCAACGGATGTGTAATGGAGCACTTGCTAAGCTTGGG--------GGAGACTGGACAAAGACCCTCCTGTGGCCTGAGGCCACGTCCACCTTCCCatccctcccactcccctctcaccacgctg-ggtcctgagtgccctcctgt----ggggcctt-ccacatgccattcttctacatggaccctcgacccagccattcacgcagctcactccccactccctcaagtcttagatcaactgttacctgctcagggag----cccaaacctcccaTTAAGTCGAAACATACC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19584526 269 - 122678785 CACAGGTCACCTGGACTCTGC---------TCACTTATTCCATGTGGGATGAATGTAGCGCCAGCGGGGGCCCAGAGGCCTCAGGGAGCCGGCCACA---CTCCCCATGGCCTCTGGGG-CTGCTGCGCCCACTCCTTtcctgcatctgcgcctcccta-------gctggctgc-ctcctgtcctgggggccttcccacatgc--------------------------------cagaggagctccctccct-------caagcctgacctcagaggttacctcctcagggagtccacccagacctcccaccacacagcaatacccc i canFam3.chr1 C 0 I 354 e mm10.chr7 3624684 2191 + 145441459 I a score=325164.000000 s hg38.chr19_GL949747v2_alt 84939 134 + 729520 aggccaggtgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgagtaggtcccctgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaa--a s panTro4.chr19 59018511 134 + 63644993 aggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgagtagatcccctgaggtctggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaa--a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895203 134 + 60714840 aggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgagtagatcccctgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaa--a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660064 131 - 106955855 Aggccaggcgcggtaat---cgcctgtaatcccagcactttgggaggccgaggcgagtagatcccctgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaagtacaaga--a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59945659 119 + 64156825 Aggccaggcgcggtggctaatgcc---------------ttgggaggccgaggcggacagattactcaaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctttactaaagatacaaaaa-- i rheMac3.chr19 C 0 I 382 s macFas5.chr19 54949618 118 + 59248254 Aggccaggcgcggtggctaatgcc---------------ttgggaggccgaggcggacagattactcaaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctttactaaagatacaaaa--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083628 118 + 51301725 aggccaggcgcggtggctaatgcc---------------ttgggaggccgaggcggacagattattcaaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccgtctttactaaagatacaaaa--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46787006 119 + 50890351 Aggccaggcgcggtggctaatgcc---------------ttgggaggccgaggcggacagattattcaaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctttactaaagatacaaaa-a- i chlSab2.chr6 C 0 I 119 s calJac3.chr22 45355692 134 + 49145316 Aggccaggcacagtggctcacacctgtaatcccagcactttgggaggccaaggcaggcagatcacctgaggtcaggagttcgaaagcagcctggccaacatggcgaaaccccgtctccactaaaaatacaaaa--a i calJac3.chr22 C 0 C 0 e mm10.chr7 3624684 2191 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I a score=27993.000000 s hg38.chr19_GL949747v2_alt 85073 20 + 729520 attagctgggcgtggtggca s panTro4.chr19 59018645 20 + 63644993 attagctgggcatggtggca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895337 20 + 60714840 gttagccgggcatggtggca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660195 20 - 106955855 attagctgggcgtggtggca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54949736 20 + 59248254 attacccggatgttgtggcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083746 20 + 51301725 attacccggatgttgtggcg i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45355826 20 + 49145316 attagccaggcgtggtggca i calJac3.chr22 C 0 C 0 e mm10.chr7 3624684 2191 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e chlSab2.chr6 46787125 119 + 50890351 I e rheMac3.chr19 59945778 382 + 64156825 I a score=8221.000000 s hg38.chr19_GL949747v2_alt 85093 8 + 729520 ggtgcctg s panTro4.chr19 59018665 8 + 63644993 ggtgcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895357 8 + 60714840 ggcgcctg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660215 8 - 106955855 ggcgcctg i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47083766 8 + 51301725 catgcctg i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45355846 8 + 49145316 tgtgcctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3624684 2191 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e chlSab2.chr6 46787125 119 + 50890351 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=56098.000000 s hg38.chr19_GL949747v2_alt 85101 100 + 729520 caggatagtcgcacgaacctgggaggtggaggggtgaagtgagttgagatcaccccactgcactccagcctgggcaacagagcgaggttctgt-----ttcaaaa s panTro4.chr19 59018673 100 + 63644993 caggatagtcgcacgaacctgggaggtggaggggtgaagtgagttgagatcaccccactgcactccaggctgggcaacagagcgagattctgt-----ttcaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895365 100 + 60714840 caggatagttgcacgaacccgggaggtggaggggtgaagtgaggtgagatcaccccactgcactccagcctgggcaacagagcgagattctgt-----ttcaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660223 100 - 106955855 caggatagtcgcatgaacccgggaggtggaggggtgaagtgagttgagatcaccccactgcattccagcctgggtgacagagtgagactctgt-----ctcaaaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47083774 82 + 51301725 -----taatttcagctactcgagaggctgaggtcaggagt------------------tccagaccagcccagtcaacatgatgaaaccctgtctttactcaaaa i papAnu2.chr19 C 0 C 0 e mm10.chr7 3624684 2191 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e calJac3.chr22 45355854 0 + 49145316 C e chlSab2.chr6 46787125 119 + 50890351 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=3343.000000 s hg38.chr19_GL949747v2_alt 85201 7 + 729520 aaaaaaa s panTro4.chr19 59018773 7 + 63644993 aaaaaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895465 7 + 60714840 aaaaaag i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47083856 7 + 51301725 aaaaaaa i papAnu2.chr19 C 0 I 393 e mm10.chr7 3624684 2191 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e calJac3.chr22 45355854 0 + 49145316 C e nomLeu3.chr10 102660323 0 - 106955855 C e chlSab2.chr6 46787125 119 + 50890351 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=88736.000000 s hg38.chr19_GL949747v2_alt 85208 342 + 729520 ttgcaacacacccgaccccccttcccatgccagaaccccacccggccattcactcctggctttatttcctcctagtgctcatctgaggaggcaggacgcagcctctccgcctctttgcttattctgctgactgaccgcctctccagccagagcatgagctgaaaaacgacagcaacttgtttctacatcccgtgccttaaccagagcctggcacgtagtacatcctccatgaacatttgcagaatcaatgaCTTTGCAAAGTGAGAAGTGCTTGGTGAATACCAAAGAGTCAGACATGCTGGAGGTTAGGGCAGGAGGTGCGACTTTAGTTACGACCTGCAG s panTro4.chr19 59018780 342 + 63644993 ttgcaacacacccgcccccccttcccatgccagaaccccaccaggccattcactcttagctttatttcctcctagtgctcatctgaggaggcaggacgcagcctctccgcctctttgcttattctgctgactgaccgcctctccagccagagcatgagctgaaaaacgacagcgacttgttcctacatcccgtgccttcaccagagcctggcacgtagtacctcctccatgaacgtttgcggaattgatgaCTTTGAAAAGTGAGAAGTGCTTGGTGAATACCAAAGAGTCAGACATGCTGGAGGTTAGGGCAGGAGGTGCGACTTTAGTTACGACCTGCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895472 334 + 60714840 ttgcaacacacccacccccccttcccatgccagaaccccacctggccattcactcttagctttatttcctcctagtgttcatctgatgaggcaggacgcagcctctc--------tgcttattctgctgactgaccgcctctccagccagagcatgagctgaaaaatgacagcgacttgttcctacatcccgtgccttaaccagaccctggcatgtagtacatcctccatgaacatttatggaatcaatgaCTTTGCAAAGTGAGAAGTGCTTGGTGAATACCAAAGAGTCAGACATGCTGGAGGTTAGGGCAGGAGGTGCGACTTTAGTTACGACCTGCAG i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3624684 2191 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e calJac3.chr22 45355854 0 + 49145316 C e nomLeu3.chr10 102660323 0 - 106955855 C e chlSab2.chr6 46787125 119 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=74622.000000 s hg38.chr19_GL949747v2_alt 85550 209 + 729520 AGAAGGCCCGTGGGCCCAGACTTGAATAA---GGAGGAGACAAAGGGG-----TGACAGGAGGAAAGTATGCCAGGCTGAGGGGACAGCCCTGCACGCAGCTTCTGAGGACTCCAGCCTAGACATGG--AGGGAGAGATGTGACTCAGCCAAACAGGGACCCAAAGACAGTGGCTGAAGCAGGTGCTGCTCCTGGGTCAGAAAGACCTGAG--TTCCGggc s panTro4.chr19 59019122 209 + 63644993 AGAAGGCCCGTGGGCCGAGACTTGAATAA---GGAGGAGACAAAGGGG-----TGACAGGAGGAAAGTATGCCAGGCTGAGGGGACAGCCCTGCACGCAGCTTCTGAGGACTCCAGCCTAGACATGG--AGGGAGAGATGTGACTCAGCCAAACAGGGACCCGAAGACAGTGGCTGAAGCAGGTGCTGCTCCTGGGTCAGAAAGACCTGAG--TTCAGggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895806 206 + 60714840 AGAAGGCCCGTGGGCCCAGACTTGAATA------AGGAAACAAAGGGG-----TGACAGGAGGAAAGTACACCAGGCTGAGGGGACAGCCCTGCACGCAGCTTCTGAAGACTCCAGCCTAGACATGG--AGGGAGAGATGTGACTCAGCCAAACAGGGAACCGAAGACAGTGGCTGAAGCAGGTGCTGCTCCTGGGTCAGAAAGACCTGAG--TTCAGggc i ponAbe2.chr19 C 0 C 0 s mm10.chr7 3626875 209 + 145441459 AGAAGATCTTTAAGCCAACACCTGAATGACAGGCAGGAGACAAATAAGAAGCAAGTCAGGAGGAGAACATTCCAGAATCAGGGAACAGCCCT---TGAACTTTTTGAAGGCCCCAGCCTAGATATGGAAAGGAAAGGACAAGACTCAGTCAAACAGTG--CCTAGGACACAGGCTAAAG-------TTctttctgatcagaaagacctgcactttccaggc i mm10.chr7 I 2191 I 1545 e canFam3.chr1 19584795 354 - 122678785 I e calJac3.chr22 45355854 0 + 49145316 C e nomLeu3.chr10 102660323 0 - 106955855 C e chlSab2.chr6 46787125 119 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=84692.000000 s hg38.chr19_GL949747v2_alt 85759 321 + 729520 ggggcacagtggctcacgcctgtaatcccagcactttgggaggccggggcgggcagatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctactaaagatacaaaaattggccggatgttgtggcacatgcctgtaatctcagctactcaagagtttgaggtcgggagttccagaccagcccggccaacatgatgagacctcatctctactaaaaaaaaaaaaaaaaaaa----gaaaaatacaaaaattagctgggtatggtggcgcatgcctgtaatcccagtttctcaggaggctgagg s panTro4.chr19 59019331 322 + 63644993 ggggcacagtggctcacgcctgtaatcccagcactttgggaggccggggcaggcagatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctactaaagatacaaaaattggccggatgttgtggcacatgcctgtaatctcagctactcaagaggctgaggtcaggagttccagaccagcccagccaacatgatgaaacctcatctctactaaaaaaaaaaaaaaaaaaa---agaaaaatgcaaaaattagctgggtatggtggcgcatgcctgtaatcccagtttctcaggaggctgagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55896012 325 + 60714840 ggggcacagtggctcacgtctgtaatcccagcactttgggaggccggggcgggcagatcccttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaagatacaaaaattggccggatgttgtagcgcatgcctgtaatcccagctactcaggaggcagaggtcaggcgttccagaccagcctggccaacatgatgaaacctcatctctactaaaaaaaaaaaaaaaaaaaaaaagaaaaatacaaaaattagctgggtgtggtggcgcatgcctgtaatgccagtttctcgggaggctgagg i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e calJac3.chr22 45355854 0 + 49145316 C e nomLeu3.chr10 102660323 0 - 106955855 C e chlSab2.chr6 46787125 119 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=41293.000000 s hg38.chr19_GL949747v2_alt 86080 108 + 729520 caggagaatcgcttgaacccaggagctggaggttgcagtgagccgagatcacaccactgccctccagcctgggtgacagagtaagactctgtctcaaaagaaaaaaaa s panTro4.chr19 59019653 104 + 63644993 caggagaatcgcttgaacccgggagctggaggttgcagtgagccgagatcacaccactgcactccagcctgggtgacagagtaagact--gtctcaaaa--aaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55896337 102 + 60714840 caggagaatcgcttgaacccgggaggtggaggttgcagggagccgagatcacaccactgcactccagcctgggtgacagagtgagactctgtctc------aaaaaaa i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45355854 98 + 49145316 caggagaatcacttgaa-ctgggaggcagaggctgcagtgagctgagatcatgtcactgcaatccagcctggatgacagagtaacaccctgttt-------aaaaa-- i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e nomLeu3.chr10 102660323 0 - 106955855 C e chlSab2.chr6 46787125 119 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=19887.000000 s hg38.chr19_GL949747v2_alt 86188 26 + 729520 aaaaaaaaGTgccaggcacggtggct s panTro4.chr19 59019757 26 + 63644993 aaaaaaaaGTgccaggcacggtggct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55896439 26 + 60714840 ataaaaaaGTgccaggcacggtggct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660323 26 - 106955855 aaaaaaaaGTgctaggcacggtggct i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45355952 26 + 49145316 aaaaaaaaCAgctgggtacggtgact i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e chlSab2.chr6 46787125 119 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=99426.000000 s hg38.chr19_GL949747v2_alt 86214 99 + 729520 cacgcttgtaatcccagcactttcagaggccaaggcgagcggatcacctgaggtcaggagtttgagaccagc----ctaacgtggtgaaaccctgtctctact s panTro4.chr19 59019783 99 + 63644993 cacacttgtaatcccagcactttcagaggccaaggcgagcggatcacctgaggtcaggagtttgagaccagc----ctaacatggtgaaaccctgtctctact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55896465 103 + 60714840 cacatttgtaatcccagcactttcagaggccaaggcgagcagatcacctgaggtcaggagtttgagaccagcctgactaacatggtgaaaccctgtctctact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660349 103 - 106955855 cacccttgtaatcccagcactttcagaggccaaggcgagcggatcacctgaggtcaggagtttgagaccaggctgactaacatggtgaaaccctctcttcact i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54949756 85 + 59248254 catgcctgtaatctcagctactcgagagg------------------ctgaggtcaggagttccagaccagcccagtcaacatgatgaaaccccatctctact i macFas5.chr19 C 0 I 17 s calJac3.chr22 45355978 103 + 49145316 cacgcctgtaatcccagcactttgggatgcctaggtgggtggatcacctgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccttgtatctact i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e chlSab2.chr6 46787125 119 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e rheMac3.chr19 59945778 382 + 64156825 I a score=402033.000000 s hg38.chr19_GL949747v2_alt 86313 240 + 729520 aaaaatacaaaattagccaggtgtagtggcgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagt-gagctgagattgcagcattgcactccagcctggacaacaagagcgaaaat-ccatctaaaaaaaaa------------------gaGTTCAAGTTTTGGCTCTggcttggcacagtggctcatgcctataatcccagcactttga------------------------gaggccagg s panTro4.chr19 59019882 243 + 63644993 aaaaatacaaaattagccaggtgtagtggtgcatgcctgtaatcccagctacttgggaggctgaggcaggagactcgcttgaacccaggaggcggaggttgcagt-gagctgagattgcagcattgcactccagcctggacaacaagagcgaaact-ccatctaaaaaaaaa-a--aa------------gaGTTCAAGTTTTGGCTCTggcttggcacagtggctcatgcctataatcccagcactttga------------------------gaggccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55896568 268 + 60714840 aaaaatacaaaattagccaggtgtggtggcgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagt-gagctgagattgcagcattgcactccagcctggacaacaagagcgaaact-ccatctaaaaaaaaaaa--aa------------gaGTTCAAGTTTTggctctagcttggcacagtggctcatgcctataatcctagcactttgagaggccaaggcaggaggatcactcgaggccagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660452 275 - 106955855 aaaaatacaaaattagccaggtgtggtggcgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccagcaggcagaggttgcagt-gagctgagattgcagcattgcactccagcctggacaacaagagcgaaact-ccatctaaaaaaaaaaa--aa-----aagaCCTGAGTTCAAGTTTCCGCTCTggcttggcacagtggctcatgcctataatcccagcactttgagaggacaaggcaggaggatcactcaaggccagg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54949858 259 + 59248254 aaaactacaaaattagccaggtgtggtggcgcatgcctgtaatcccagctactcgggaggctgaggcagaagaatcgcttgaacccagaaggtggaggttgcggt-gagccgagatcacaccattgcactccagcctgggcaacaagagcgaaactcccatctgaaaaaaaaaaagaaagaaaaagaCCGGAgttcaagtctcagctctggcctggcacagtggctcatgcctataatcccagcactttga------------------------gaggccaag i macFas5.chr19 I 17 I 16 s chlSab2.chr6 46787244 254 + 50890351 aaaactacaaaattagctaggtgtggt---gtatgcctgcaatcccagctacttgggaggctgaggcaggagaatcgcttgaacccagaaggtggaggttgcggt-gagccgagatcacaccattgcactccagcctgggcaacaagagcgaaactcccatctgaaaaaaaaaa--aaagaaaaagaCCGGAGTTCaagtctcagctctggcctggcacagtggctcatgcctagaatcccagcactttga------------------------gaggccaag i chlSab2.chr6 I 119 I 16 s calJac3.chr22 45356081 280 + 49145316 aaaaatacaaaattagctgggtgtggtggtgcatgcctgtaatcccagctactcgggatgctgaggcaggagaatcgcttgaacccaggaggtggaggttgcggtggagctgagatcgcatcattgctctccagcctaggcagcaagaatgaaacc-ccatctcaaaaagaaaa--aa-gaaaaagacctgagttcaaatcttggctctggcttggcatggtggctcatgcctataatcccagcactttgagaggccaaggcaggaggatcacttgaggccagg i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e papAnu2.chr19 47083863 393 + 51301725 I e rheMac3.chr19 59945778 382 + 64156825 I a score=382868.000000 s hg38.chr19_GL949747v2_alt 86553 180 + 729520 agttcgacaccagcctgggcaacagagtgagacccc-aacact-caaaaactaaccaaa----aaaattagctgggcttggtggctgtagtcccagctccttcggaggctg---------------agattgctagagtccaggatgttggggctgcagtgagccacagtcatgccactgcactccagcctgggcaacaga s panTro4.chr19 59020125 181 + 63644993 agttcgacaccagcctgggcaacagagtgagacccccaacact-caaaaactaacaaaa----aaaattagctgggcttggtggctgtagtcccagctccttcggaggctg---------------agattgctagagtccaggatgttggggctgcagtgagccacagtcatgccactgcactccagcctgggcaacaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55896836 180 + 60714840 agttcgacaccagcctgggcaacagagtgagacccc-gacact-caaaaactaacaaaa----aaaattagctgggcttggtggctgtagtcccagctcctttggaggctg---------------agattgctagagcccaggatgttggggctgcagtgaaccacagtcatgccactgcactccagcctgggcaacaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660727 175 - 106955855 agttcaacaccagcctgggcaacacagtgagacccc-aacact-caaaaactaac--------aaaattagctgggcttggtggccgtcgtcccagctccgtcggaggctg---------------agattg-tagagcccaggatgttggagctgcagtgagccacagtcatgccactgcactccagcctgggcaacaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946160 176 + 64156825 agtttgacaccagcctgggcaacagagtgagaccgc-aacactacaaaaaaaaa---------aaaatcatctggccttggtggctgtagtcccagttcctttggaggttg---------------agattgctagagcccaggatgttgaggctgcagtgagccacagtcatgccactgcactccagcctgggcaacaga i rheMac3.chr19 I 382 C 0 s macFas5.chr19 54950133 175 + 59248254 agtttgacaccagcctgggcaacagagtgagacccc-aacactac-aaaaaaaa---------aaaatcatctggccttggtggctgtagtcccagttcctttggaggttg---------------agattgctagagcccaggatgttgaggctgcagtgagccacagtcatgccactgcactccagcctgggcaacaga i macFas5.chr19 I 16 C 0 s chlSab2.chr6 46787514 185 + 50890351 agttcgacaccagcctgggcaatagagtgagacccc-aacactacaaaaaaaaaacaaaaaacaaaatcatctggccttggtggctgtagtcccagttcctttggaggttg---------------agattgctagagtccaggatgttgaggctgcagtgagccacagtcatgccactgcactccagcctgggcaacaca i chlSab2.chr6 I 16 C 0 s calJac3.chr22 45356361 193 + 49145316 agtttgacaccagcctgggcaacagagtgagacccc-atgactacaaaaaagaa---aa----aaaagtagctgggcatggtggctgtagtcccagcttcttgggaggctggaggctaagacaggaagattgctagagcccaggaggtggaggctgcagtgagccacaatcataccactgcactccagcctgggcaacaga i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e papAnu2.chr19 47083863 393 + 51301725 I a score=460249.000000 s hg38.chr19_GL949747v2_alt 86733 206 + 729520 gaaagaccctgtctcaaaaaaaaaaaa--aaatctcagatctgccactgctgagctctgag--cttgggtgcattacttaacctctctgagccttgattttctatacttgta--aaatagtagta--------atCTATTCCT-GGGGG-TGGATTAATGGCAGAGGCTCCAG------------------------TTGAGTCCGTTTGGGCCTTGGTGTCTGTCTGTTAAACAGGGTTTGGAAT s panTro4.chr19 59020306 203 + 63644993 gaaagaccctgtctcaaaaaaaaaaaa-----tctcagatctgccactgctgagctctgag--cttgggtgcattacttaacctctctgagccttgattttctatacttgta--aaataggagta--------atCTATTCCT-GGGGG-TGGATTAACGGCAGAGGCTCCAG------------------------TTGAGTCCGTTTGGGCCTTGGTGTCTGTCTGTTAAACAGGGTTTGGAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55897016 200 + 60714840 gcaagaccctgtctcaaaaaaaaa--------tctcagatctgccactgctgagctctgag--cttgggtgcattacttaacctctctgagccttgattttctatacttgta--aaataggagta--------atCTATTCCTGGGGGG-TGGATTAACAGCAGAGGCTCCAG------------------------TTGAGTCCGTTTGGG-CTTGGTGTCTGTCTGTTAAACAGAGTTTGGAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660902 204 - 106955855 gcaagaccctgtctcaaaaaaaaaaaaaaaaatctcagatctgccactgctgagctctgag--cttgggtgcattacttaacctctctgagccttgattttctatacttgta--aaatagaagta--------atCTATTCTT-GGGGG-TGGATTAACAGAAGAGGCTCCAG------------------------TTGAGTCCGTTTGGGCCTTGG----TGTCTGTTAAACAGGGTTTGGAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946336 200 + 64156825 gcaagaccctgtctcaaaaaaaaa--------tctcagatctgccactgctgaactctgag--cttgggtgcattacttaacctctctgagcctttattttctacgctagta--aaataggaata--------atCTATTCCT-GGGGG-TGGATTAAGAGCAGAGGCTCCAA------------------------TTGAGTCCATTTGGGCCTTGGTGTCCATCTGTTAAGCAGGGTTTGGAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54950308 200 + 59248254 gcaagaccctgtctcaaaaaaaaa--------tctcagatctgccactgctgaactctgag--cttgggtgcattacttaacctctctgagcctttattttctacgctagta--aaataggaata--------atctattcct-gGGGG-TGGATTAAGAGCAGAGGCTCCAA------------------------TTGAGTCCATTTGGGCCTTGGTGTCCATCTGTTAAGCAGGGTTTGGAAT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46787699 199 + 50890351 gcaagaccctgtctcaaaaaaaca--------tctcagatctgccactgctgagctctgag--cgtgggtgcattacttaacctctctgagcctttattttctatgctagta--aaacagaaata--------atctattcct-gGGGA-TGGA-TAAGAGCAGAGGCTCCAA------------------------TTGAGTCCGTTTGGGCCTTGGTGTCCATCTGTTAAACAGGGTTTGGAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45356554 207 + 49145316 gcgagaccccatctcacaaaaag---------tttcaggtctgccactgctgagctctgtg--cttcggtgtgttacttaacctctctgagccttaattttctatacttgt---aaatagacgtaataacaggatctattcct-gggggctgGATTAAGAGCAGAGGCTCCAG------------------------TTGAGTCCCTTTGGGCCTGGGTGTCCATATGTTAAACAGAGTTTGGAAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19585149 219 - 122678785 gaaagacctgggttcaaa--------------tcccag-cctgccact-ctcagctgtgtgaccttgggcaagttacctaacctatcttagtcttgcatttcaccacctgtcttgaata-acgcc--------acctgttctaatggga-cagattaagagcagaaaatcaaatgccagatacatttgagcaaatgcttGAGTCCCTCTGGACCT-GGTATTTGTGTGCTAAACAGGGCTTGGGGT i canFam3.chr1 I 354 I 632 e mm10.chr7 3627084 1545 + 145441459 I e papAnu2.chr19 47083863 393 + 51301725 I a score=10696.000000 s hg38.chr19_GL949747v2_alt 86939 4 + 729520 ATGC s panTro4.chr19 59020509 4 + 63644993 ATGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55897216 4 + 60714840 ATGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102661106 4 - 106955855 ATGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946536 4 + 64156825 ATGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54950508 4 + 59248254 ATGC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46787898 4 + 50890351 ATGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45356761 4 + 49145316 ATGC i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19585368 632 - 122678785 I e papAnu2.chr19 47083863 393 + 51301725 I a score=165698.000000 s hg38.chr19_GL949747v2_alt 86943 66 + 729520 CCCTGGCCTCT-----AGCCTTCCTCCTTACAGAACTCCCCAATACTGTCATTAAGAATTGAggccagatg s panTro4.chr19 59020513 66 + 63644993 CCCTGGCCTCT-----AGCCTTCCTCCTTACAGAACTCCCCAATACTGTCATTAAGAATTGAggccagacg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55897220 66 + 60714840 CCCTGGCCTCT-----AGCCTTCCTCCTTACAGAACTCCCCAACACTGTCATTAAGAATTGAggccagatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102661110 66 - 106955855 CCCTGGCCTCT-----AGCCTTCCTCCTTACAGAACTCCCCAACACTGTCATCAAGAATTGAggccagatg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946540 66 + 64156825 CCCTGGCCTCT-----AGCCTCCCTCCTTACAGAACTTCCCAACACTGTCATCAAGAGTTGAggccaggtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54950512 66 + 59248254 CCCTGGCCTCT-----AGCCTCCCTCCTTACAGAACTTCCCAACACTGTCATCAAGAGTTGAggccaggtg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46787902 66 + 50890351 CCCTGGCCTCT-----AGCCTCCCTCCCTACGGAACTTCCCAACACTGGCATTAAGAGTTGAggccaggtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45356765 58 + 49145316 CCC-------------AGCCTCCCTCCTTACAGAACTCCCTAGCGCCGTCATTAAGAGCTGAggccaggtg i calJac3.chr22 C 0 C 0 s canFam3.chr1 19586000 65 - 122678785 CCCAGGCCACTACACCAGCCTCCCTTCTTTCCCAGCTCCCCAACACCACCATTA------GGGGTCAGATG i canFam3.chr1 I 632 I 483 e mm10.chr7 3627084 1545 + 145441459 I e papAnu2.chr19 47083863 393 + 51301725 I a score=196402.000000 s hg38.chr19_GL949747v2_alt 87009 82 + 729520 tggtggctcatgcctgtaatcctagcattttgggaggtcaaggcgagtggatcacttgaggtcaggagttcaagaccagcct s panTro4.chr19 59020579 82 + 63644993 tggtagttcatgcctgtaatcctagcattttgggaggtcaaggcgagtggatcacttgaggtcaggagttcaagaccagcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55897286 82 + 60714840 cggtggctcatgcctgtaatcctagcattttgggaggtcaaggcgagtggatcacttgaggtcaggagttcaagaccagcct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102661176 82 - 106955855 cggtggctcatgcctgtaatcctagcattttgggaggtcaaggcgagtggatcacttgaggtcaggagttcaagaccagcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946606 82 + 64156825 tggtggctcatgcctgtaatcctagcattttgggaagccaaggtgagtggatcacttgaggtcaggagttcaagaccagcct i rheMac3.chr19 C 0 I 281 s macFas5.chr19 54950578 82 + 59248254 tggtggctcatgcctgtaatcctagcattttgggaagccaaggtgagtggatcacttgaggtcaggagttcaagaccagcct i macFas5.chr19 C 0 I 278 s chlSab2.chr6 46787968 82 + 50890351 cggtggcttatgcctgtaatcctagcattttgggaggccaaggtgaggggatcacttgaggtcaggagttcaagaccagcct i chlSab2.chr6 C 0 I 286 s calJac3.chr22 45356823 82 + 49145316 caatggctcatgcctgtaatcctagtatttggggaagccaaggcgaggggttcccttgaggtaaggaactcaagaccagcct i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19586065 483 - 122678785 I e papAnu2.chr19 47083863 393 + 51301725 I a score=365974.000000 s hg38.chr19_GL949747v2_alt 87091 466 + 729520 gggcaacatggcaaaaccccatctctacaaaaagtacaaaaattagccaggtgtggtggtgtgtgcctgtagtcccagctattttgggggctgaggcaggaggactgcttgaacctgggagactgaggctgcaatgagctgagattgcgccactgcactccagctttggtgacaaagtgagaacctgtctcaagaaa---gagaaaaagaGTTGAAggccaggcgtggtggctcaagcctgtaatcccagcaccttgggaggctgaggtgggcagatcacctgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatagaaaaattagctgggtgtggtggcgggcgcctgtaatcccagctactagggaggctgagtcaggagaatcacttgaacccaggaggtggaggttacagtgagctgagatggtgccattgcactcca s panTro4.chr19 59020661 452 + 63644993 gggcaacatggcaaaaccccgtctctacaaaaagtacaaatattagccaggtgtggtggtgtgcgcctgtagtcccagctattttgggggctgaggcaggaggactgcttgaacctgggagatggaggctgcaatgagctgagattgtgccattgcactccagc-------acaaagtgagaacctgtctca----------gaaaaagaGTTGAAggccaggcatggtggctcaagcctgtaatcccagcaccttgggaggctgaggtgggcagatcacctgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcaggcgcctgtaatcccagctactagggaggctgagtcaggagaatcactcgaacccaggaggtggaggttacagtgagctgagatggtgccattgcactcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55897368 465 + 60714840 gggcaacatggcaaaacctcatctctacaaaaagtacaaaaattagccaggtgtggtggtgtgcgcctgtagtcccagtttttttgggggctgaggcaggaggactgcttgaacctgggagat-gaggctgcaatgagctgagactgtgccactgcactccagctttggtgacaaaatgagaccctgtctcaaaaaa---gagaaaaagaGTTGAAgaccaggcatggtggctcaagcctgtaatcccagcaccttgggaggctgaggcaggcggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcaggcgcctgtaatcccagctactagggaggctgagtcaggagaatcacttgaaccccggaggtggaggttacagtgagctgagatggtgccattgcactcca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102661258 439 - 106955855 gggcaacatggcaaaaccccatctctacaaaaagtacaaaaattagccaggtgtggtggtgtgcacctgtagtcccagctatttcaggggctgaggtagaaggactgcttgaacctgagagatcgaggctgcagtgagctgagattgcgccactgcactccagctttggtgacaaagtaagaccctgtctcaaaaaa---gagaaaaagaGTTGAAggccaggtgtggtggctcaagcctgtaatcccagcaccttgggaggctgaagcggtcggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtttctactaaaaatacagaaattagctgggtgtggtggc---------------------------aggctgagtcaggagaatcgcttgaacccaggaggtggaggttacagtgagctgagatggtgccattgcactcca i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45356905 464 + 49145316 gggcaacatggcgaaaccccagctctacaaaaagtacaaacgttagccaggtgtg-----gtgtgcctgtagtccccgctgttttgggggctgaggcaggaggattgcttgaacctgggaggttgaggctgcagtgagctgagattgcaccactgcactccagctttggtgacaaagtgagacgctgcctcaacaaagaggaggaaaaaaGCTGAAggccaggcgtggtggctcacacctgtaatcccagcaccttgggaggctgaggtgggtggatcacctgagatcaggagtttgagaccagcctggccaacgtggtgaaacgccggctctactaaaaatacaaaaattcgttgggtgtggtggcacacacctgtagtcccagctactcgggagactgaggcaggagaatcacctgaacccaggaggtggaggttacagtgagcaaagatggcaccactgcactcca i calJac3.chr22 C 0 I 2105 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19586065 483 - 122678785 I e chlSab2.chr6 46788050 286 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54950660 278 + 59248254 I e rheMac3.chr19 59946688 281 + 64156825 I a score=326476.000000 s hg38.chr19_GL949747v2_alt 87557 633 + 729520 gcctgggagacaagagcgagactccacctcaaaaaaaaaaaaaaaaaaaaaaaaaaagttgaattatttcccccaaaagagggtgttgaggctttaacccccagtacctcaggatcaccttatatggagacagtgtcgttacaaaagtaatcaagttcaaatgaagccagtgggtgggccctaatccagtatgactggagtccttataaaaagggtaaattgggacacagacacacacacaggg--agcagcaatgtgaagatgaaggcggagatcagggtgatgtttgtacgtgccaatgactgccagaaacctccagaagccaggggagaggcctggaagattctcacaaccctgtcgacaccttgccttggatgtctagcctccagaactgtcagacaggaatttctgtgcttgagggaccctatttgtgataagttctgggagtccaagcagactaatacaACTGTCTTCAGAGtttcaggcatccagacctgatgctgttcctcccccatttgaaacccttcagtggctccttcactctcaagg-aaaaaaaaatatccagacttcttgtcctggtgttcctggcctgccaagatctgagccctgcctgctgtttaatcctcatTGATTGA s panTro4.chr19 59021113 632 + 63644993 gcctgggagacaagagcgagactccacctcaaaaaaaaaaaaaaaaaaaaaaga---gttgaattatttcccccaaaagagggtgttgaggctctaacccccagtacctcaggatcaccttatatggagacagtgtcgttacaaaagtaatcaagttcaaatgaggccagtgggtgggccctaatccagtatgactggagtccttataaaaagggtaaattgggacacacacacacacacagaggcagcagcaatgtgaagatgaaggcggagatcagggtgatgtttctacgtgccaatgactgccagaaacctccagaagccaggggagaggcctggaagattctcacaaccctgtcgacaccttgccttggacgtctagcctccagaactgtcagacaggaatttctgtgcttgagggaccctatttgtgataagttctgggagtccaagcaaactaatacaACTGTCTTCAGAGtttcaggcatccagacctgatgctgttcctcccccatttgaaacccttcagtggctccttcactctcaagg-aaaaaaaaatatccagacttcttgtcctggtgttcctggcctgccaagatctgagcccTGCCTGCTGTTTAATCCTCattgattga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55897833 619 + 60714840 gcctgggagacaagagcgagactccatctcaaaaaaaaaga----------------TttgaattatttcccccaaaagagggtgttgaggctctaacccccagtacctcaggatcgccttatatggaggcagtgtcgttacaaaagtaatcaagttcaaatgaagccagtgggtgggccctaatccagtatgactggagtccttataaaaaggggaaattgggacacagacacacacacagagggagcagcaatgtaaagatgaaggcggagatcagggtgatgtttctacgtgccaatgactgccagaaacctccagaagccaggggagaggcctggaagattctcacaaccctatcgacaccttgccttggacgtctagccttcagaactgtcagacaagaatttctgtgcttgagggaccctgtttgtgataagttctgggagtccaagcaaactaatacaACTGTCTTCAGAGtttcaggcatccagacctgatgctgtccctcccctgtctgaaacccttcagtggctccttcactctcaaag-aaaaaaaaatatccagacttcttgtcctggtgttcctggcctgccaagatctgagcccTGCCTGCTGTTTAATCCTCattgattga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102661697 620 - 106955855 gcctgggagacaagagcgagactccatctcaaaaaaaaaga----------------GTGCaattatttcccccaaaagagcatgttgaggctctaacccccagtacctcaggatcaccttatatggagacagtgtcgttacaaaagtaatcaagttcaaatgaagccagtgggtgggccctaatccagtatgactggagtccttataaaaaggggaaattgggacacagacacacacacagagggagcagcaatgtgaagatgaaggcggtgatcagggtgatgtttctacgtgccaatgactgccagaaacctccagaagccaggggagaggcctggaagattctgataatcctgtcgacaccttgcctgggacgtctagcctccagaaccgtcagacaggagtttctgtgcctgagggaccctgtttgtgatacgttctgggagtccgagcaaacgaatacaACTGTCTTCAACGtttcaggcatccagacctgatgctgtccctcccccgtttgaaacccttcagtggctccttcactctcaaggaaaaaaaaaatatccagacttcttgtcctggtgttccttgcctgccaagatctgagcccTGCCTGCTGTTTCATCCTCACTGATTGA i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19586065 483 - 122678785 I e calJac3.chr22 45357369 2105 + 49145316 I e chlSab2.chr6 46788050 286 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54950660 278 + 59248254 I e rheMac3.chr19 59946688 281 + 64156825 I a score=2992.000000 s hg38.chr19_GL949747v2_alt 88190 8 + 729520 TTGATTGA s panTro4.chr19 59021745 8 + 63644993 ttgattga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55898452 8 + 60714840 ttgattga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102662317 6 - 106955855 TTGAtt-- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54950938 8 + 59248254 ttgttttg i macFas5.chr19 I 278 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19586065 483 - 122678785 I e calJac3.chr22 45357369 2105 + 49145316 I e chlSab2.chr6 46788050 286 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e rheMac3.chr19 59946688 281 + 64156825 I a score=12034.000000 s hg38.chr19_GL949747v2_alt 88198 11 + 729520 tt------------ttgagacgg s panTro4.chr19 59021753 19 + 63644993 tt----gattgattttgagacgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55898460 23 + 60714840 ttgattgattgattttgagacgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102662323 9 - 106955855 --------------ttgagacgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946969 11 + 64156825 ------------ttttgagacgg i rheMac3.chr19 I 281 C 0 s macFas5.chr19 54950946 11 + 59248254 ------------ttttgagacgg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46788336 11 + 50890351 ------------ttttgagacgg i chlSab2.chr6 I 286 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19586065 483 - 122678785 I e calJac3.chr22 45357369 2105 + 49145316 I e papAnu2.chr19 47083863 393 + 51301725 I a score=558783.000000 s hg38.chr19_GL949747v2_alt 88209 262 + 729520 agtctcactctgtcacccaggctggagtacagcagcatgatcttggctcactgcaacctccgccttccgggttcaagcaattctcatgcctcagcctccctagtagctgcgactacaggtgcgcaccaccacacctggctaattttttt-gta-ttttagtaga---gatggggtttcaccatgttggccaggctggtctcgaactcctaacctcaggtgatccgcctgcctcagcctccca--gtgctaggattacaa--------------------------------gcgtgagcca s panTro4.chr19 59021772 263 + 63644993 agtctcactctgtcacccaggctggagtacagcagcatgatcttggctcactgcaacctccgcctcccgggttcaagcaattctcatgcctcagccccccgagtagctgcgactacaggtgcgcaccgccacacctggctaattttttttgta-ttttagtaga---gatggggtttcaccgtgttggccaggctggtctcgaactcctaacctcagatgatccgcctgcctcagcctccca--gtgctaggattacaa--------------------------------gcgtgagcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55898483 264 + 60714840 agtctcactctgtcacccaggctggagtatggcagcatgatcttggctcactgcaacctccacctcccgggttcaagcaattctcatgcctcagcctcccgagtagctgggactacaggcgcacaccaccacacctggctaattttttt-gta-ttttagtaga---gacggggtttcaccatgttggccaggctggtctcgaactcctaacctcaggtgatccgcctgcttcagcctcccacggtgctgggattacag--------------------------------gcatgagcca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102662332 264 - 106955855 agtctcactctgtcacccaggctagagtacagcagcatgatcttggctcactgcaacctccacctcccgggttcaagcaattctcatgcctcagcctcccaagtagctgggactacaggcgtgcaccaccacacctggctaattttttt-gta-ttttagtaga---gacggggtttcaccatgttggccaggctggtctttaactcctaacctcaggtgatccgcctgcctaagcgtcccacagtgctgggattacag--------------------------------gcatgagcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946980 295 + 64156825 agtcttactctgttgcccaggctggagtgcagtggtgcgatcttggctcactgcaacctctgcctcctgggttcaagcgattctcctgccttagcctcccaagtagctgggattacaggcacataccaccacatccggctaatttttt--gta-ttttagtaga---gacggggtttcaccatgttggccaggctggtcttgaactcctaaccttgggtgatctgcctgcctcagcctcccacagtgctggggttacaggcatgagccaccgcgcctggccCACCCTCAAGGCATGAGCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54950957 263 + 59248254 agtcttactctgttgcccaggctggagtgcagtggtgcgatcttggctcactgcaacctctgcctcctgggttcaagcgattctcctgccttagcctcccaagtagctgggattacaggcacataccaccacatccggctaatttttt--gta-ttttagtaga---gacggggtttcaccatgttggccaggctggtcttgaactcctaaccttgggtgatctgcctgcctcagcctcccacagtgctggggttacag--------------------------------gcatgagcca i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46788347 263 + 50890351 agtcttactctgttgcccaggctggagtgcagtggtgcgatcttggctcactgcaacctctgcctcctgggttcaagcaattctcctgccttagcctcccaagtagctgggattacaggcacataccaccacgtccggctaatttttt--gta-ttttagtaga---gaaggggtttcaccatgttggccaggctggtctcgaactcctaaccttgggtgatctgcctgcctcagccttccacagtgctggggttatag--------------------------------gcatgagcca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45359474 266 + 49145316 agtcttactctgtcacccagggtggagtgctatggcatgatctcggctcactgcaacctccacctcctgcgttcagccagttcttacgcctcagcctcacaagtagctgggacgacaggtgcacaccaccacacctggttaactcttt--gtatttttagtggagatgatggggtttcatcatgttggccaggctggtctggaactcctgaccttaggtaattctcatgccttggcctcccaaag-gctgggattacag--------------------------------gcctgagcca i calJac3.chr22 I 2105 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19586065 483 - 122678785 I e papAnu2.chr19 47083863 393 + 51301725 I a score=613780.000000 s hg38.chr19_GL949747v2_alt 88471 273 + 729520 ccatgcccagccCAT---CCTTATTCTcagcaaggaggctattgcagtcattcagcccagac-agctggagtttgca-atggcagccatagggatggaggagaggagaagggtcCAGAGACACTCAAGAGGCGGAATGAATGAGTCGAGAGGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCTTGGGC-TTTCACCTGTGAGCGGTGCCACGCATTGAGAGGCCCCCGGGAGACATCAGAGAACCCATCTGCGTTGTCAGGGAAGCTCCACG s panTro4.chr19 59022035 273 + 63644993 ccatgcccagccCAT---CCTTATTCTCAGCAAGGAGGCTATTGCAGTCATTCAGCCCAGAC-AGCTGGAGTTTGTA-GTGGCAGCCATAGGGATGGAGGAGAGGAGAAGGGTCCAGAGACACTCAAGAGGCAGAATGAATGAGTCGAGAGGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCTTGGGC-TTTCACCTGTGAGCGGTGCCACGCATTGAGAGGCCCCCGGGAGACATCAGAGATCCCATCTGCGTTGTCAGGGAAGCTCCACG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55898747 272 + 60714840 ccacgcccagccCAT---CCTCATTCTCAGCAGGGAGGCTATTGCAGTCATTCAGCCCAGAC-AGTTGGAGTTTGCA-GTGGCAGCCGT-GGGATGGAGGGGAGGAGAAGGGTCCAGAGACACTCAAGAGGCAGAATGAATGAGTCGAGAGGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCTTGGGC-TTTAACCTGTGAGCGGTGCCACGCATTGAGAGGCCCCCGGGAGACATCAGAGAACCCATCTGCGTTGTCAGGGAAGCTCCACG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102662596 273 - 106955855 ccacgcccagccCAT---CCTCATTCTcagcaaggaggctattgcagtcattcagcccagac-agttggagtttgca-gtggcagccgtagggatggaggggaggagaagggtccagagacattcaagaggcagaatgaaTGAGTCGAGAAGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCCTGGGC-TTTCACCTGTGAGCGGTGCCATGCATTGAGGGGCCCCCGGGAGACATCAGAGAACCCATCTGCGTTGTCAGGGAAGCTCCACG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59947275 275 + 64156825 CCGTGCCTGGCCCAC---CCTCGTTCTCAGCAAGGAGGCTGATGCAGTCATTCAGCCTAGAC-AGCTGGAGTTGGAGTTTGGCAGCCGTGGGGATGGAGGGAAGGAGAAGGGTCCAGAGACATGCAAGAGGCAGAATGAATGAGTCGAGAGGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCCTGGGCTTTTTACCTGTGAGCGGTGCCACACATTGAGAGGCCCCCAGGAGACATCGGAGGACCCATCTGGGTTGTCAGGGAAGCTCCACG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54951220 274 + 59248254 ccgtgcctggccCAC---CCTCATTCTCAGCAAGGAGGCTGATGCAGTCATTCAGCCTAGAC-AGCTGGAGTTGGAGTTTGGCAGCCGTGGGGATGGAGGGAAGGAGAAGGGTCCAGAGACATGCAAGAGGCAGAATGAATGAGTCGAGAGGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCCTGGGC-TTTTACCTGTGAGCGGTGCCACACATTGAGAGGCCCCCAGGAGACATCGGAGGACCCATCTGGGTTGTCAGGGAAGCTCCACG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46788610 274 + 50890351 ccgcgcATGGTCCAC---CCTCATTCTCAGCAAGGAGGCTGATGCAGTCATTCGGCCCAGAC-AGCTGGAGTTGGAGTTTGGCAGCCGTGGGGATGGAGGGAAAGAGAAGGGTCCAAAGACATGCAAGAGGCAGAATGAATGAGTCGAGAGGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCCTGGGC-TTTCACCTGTGAGCGGTGCCACACATTGAGAGGCCCCCAGGAGACATCGGAGGACCCATCTGGGTTGTCAGGGAAGCTCCACG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45359740 243 + 49145316 caatgcctggGCCAT--CCCTCATTCTCAGCAGGGAGGCTGGTGCAGTCATTCACCCTAGACAAACTGGAGTTTGCC-ATGGCAGCCGTGGGGATGGAGG-----------------------------GTCAGAATGAATGGGTCGAGAGGAGTGAACCCTGGCAGGGGCATGGGAGATGTGAAGAGCCTGGAC-TTTCACCTGT---CTCTACTACCTATTGAGAGACCCCTGGGAGACATCACAGCACCCATCTGGGTTGTCAGGGAAACTCCACA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19586548 229 - 122678785 CCAGGCCAACCGCATGCTCCTCATTCTCACCGAGGA-GCTGATGCAGTGATGCAGCTGAG---AACCTGTGTCTGGG-GCAGAAGCCATGGGGATGG-GGGCAGGGGAAGGATTC-----------------------AACAGGACAGGAGGACCTGA---TGAGAAGGGTACAGGAGACTTGAAAAGTCTGATC-----AGCGGGGAACA-----------TGAGAGGCACCTA-CAAACATCAGTGAGCTGAGCTGGGTCACCAGGGATGCTCAGA- i canFam3.chr1 I 483 C 0 e mm10.chr7 3627084 1545 + 145441459 I e papAnu2.chr19 47083863 393 + 51301725 I a score=980645.000000 s hg38.chr19_GL949747v2_alt 88744 313 + 729520 GGAGATGGCCCttccaggggcccggcacagggccagacacataatg---------catgctaaatgactgaat----atataagctaaatgactgaatATATCAGCAAGCCAAGAAAGGCTGGGCATGTGGAAAGGCAGAGATTGC--------GGGGGGCGGTAGTTTAGGCCAGGGGACCCCAAAACCGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC s panTro4.chr19 59022308 308 + 63644993 GGAGATGGCCCttccaggggcccggcacagggccagacacataatg---------catgctaaatgactgAAT----ATATAAGCGGAA-----GATTCCTTCAGCAAGCCAAGAAAGGCTGGGCATGTGGAAAGGCAGAGATTGC--------AGGGGGCGGTAGTTTAGGCCAGGGGACCCCAAAACAGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGGCCTAGTGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55899019 308 + 60714840 GGAGATGGCCCttccaggggcccggcacagggccagacacataatg---------catgctaaatgactgAAT----ATATAAGCGGAA-----GATTCCTTCAGCAAGCCAAGAAAGGCTGGGCATGTGGAAAGGCAGAGATTGC--------GGGGGGCGGTAGTTTAGGCCAGGGGACCCCAAAACAGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGTTCCCGGAGCCCTGAGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102662869 309 - 106955855 GGAGATGGCCCTTCCCGGGGCCCAGCGCAGGGCCAGAGACATAATG---------CATGCTAAATGACTGAAT----ATATAAGCGGAA-----GATTCCTTCAGCAAGCCAAAAAAGGCTGGGCATGTGGAAAGGCAGAGATTGC-------GGGGGGGCGGCAGTTTAGGCCAGGGGACCCCAAAACAGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59947550 312 + 64156825 GGAGATGGCCCTTCCAGGGCCTTGGCATAGGGCCAGACACATAATG---------CATGCTAAATGAGTGAATATACATATAAGTGGAG-----GATTCCTTCAGCAAGCCAAGAAAGGCTGGGCGTGTGGAAAGGCAGAGATTGC--------GGGGGGCGGTAGTTTACGCCAGGGGACCCCAAAACGGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAATGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54951494 312 + 59248254 GGAGATGGCCCTTCCAGGGCCTTGGCATAGGGCCAGACACATAATG---------CATGCTAAATGAGTGAATATACATATAAGTGGAG-----GATTCCTTCAGCAAGCCAAGAAAGGCTGGGCGTGTGGAAAGGCAGAGATTGC--------GGGGGGCGGTAGTTTACGCCAGGGGACCCCAAAACAGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAATGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46788884 312 + 50890351 GGAGATGGCCCTTCCAGGGCCTTGGCACAGGGCCAGACACATAATG---------CATGCTAAATGAGTGAATATGCATATAAGCGGAG-----GATTCCTTCAGCAAGCCAAGAAAGGCGGGGCGTGTGGAAAGGCAGAGATTGC--------GGGGGGCGGTAGTTTACGCCAGGGGACCCCAAAACAGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45359983 294 + 49145316 GGAGATGG-------AGCGGCCTGGCACAGGGCCAGACACATAGGG----------ATGCTAAATGAGTGAAT--------AAGCAAAA-----GATTCATTCAGCGAGCCAAGGAAGGCTGGGCATGTGGAGAGGCAGAGATGGC--------GGGGGGCAGTAGTTTAGGCCAGGGGACCCCAAAAC--GGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTGGTACTTTCTGCGGTTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC i calJac3.chr22 C 0 M 682 s mm10.chr7 3628629 321 + 145441459 GGAAGAGACTACTTAGGGTGCCTGGCACAGACTTAGACCCACATGGATCTGTTCACTTGTTCAAGTACAAAaggaaagggaaaaagaag-----ga------catgaggaggaggaggaggcggtatgaggagggggtggTGTTGGCATCGGCAGCGAGGCGGCAGTTCTGGCGAGAGGACCCCCAAAT--GGGAATCCACACTTACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTGGTACTTTCTACGATTTAGTTCCCGCTGGCGACGCCTTCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGTCCTGAATC i mm10.chr7 I 1545 C 0 s canFam3.chr1 19586777 282 - 122678785 GCACAGGGCTCTcccagtgcctt-gtatggtgcctgatacacaata---------ggtacAGAACCACTGAAC---------------------GATTCACTCAGCCAGGTAAGGAAGGC-AGGCATGTGGACA--------------------GAGAAGGGGTAATTTAGGCCAGGGGACCCCAGAACGGGGGAATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGCACCTGGTACTTCCTACGATTTAGTTCCCGCTGGCGCCGCCGCTGGCCCCGGGCAGCCTCTTCCTCTTCATCTCGCTCCCGGAGACCTGAGCC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47083863 393 + 51301725 I a score=131739.000000 s hg38.chr19_GL949747v2_alt 89057 43 + 729520 GCCCAGACCACCTGACACAAACTCCACTTCCGTCTCCAGCTCG s panTro4.chr19 59022616 43 + 63644993 GCCCAGACCACCTGACACAAACTCCACTTCCGTCTCCAGCTCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55899327 43 + 60714840 GCCCAGACCACCTGACACAAACTCCACTTCCGTCTCCAGCTCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102663178 43 - 106955855 GCCCAGACCACCTGACACAAACTCCACTTCCGTCTCCAGCTCG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59947862 43 + 64156825 CCCCAGACCCCCTGACACAAACTCCACTTCCGTCTCCAGCTCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54951806 43 + 59248254 CCCCAGACCCCCTGACACAAACTCCACTTCCGTCTCCAGCTCG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46789196 43 + 50890351 ACCCAGACCCCCTGACACAAACTCCACTTCCGTCTCCAGCTCG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3628950 43 + 145441459 ACCCAGACCACCGGACACAAATTCCACTTCTGTCTCTAGCTCA i mm10.chr7 C 0 C 0 s canFam3.chr1 19587059 43 - 122678785 ACCCAGACCCCCGGACACGAACTCCACTTCCGTCTCCAGCTCA i canFam3.chr1 C 0 C 0 e calJac3.chr22 45360277 682 + 49145316 M e papAnu2.chr19 47083863 393 + 51301725 I a score=575990.000000 s hg38.chr19_GL949747v2_alt 89100 174 + 729520 CTCTCCAGGATGTGGCCACCAAATAGGGGAGGCAACGCCAACTCTGAGCCTGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGAGGCAGGGAAAGGCTCAGGggccctggatcctggacccccagccccttctcccactgaaccaggagcccagacccc s panTro4.chr19 59022659 174 + 63644993 CTCTCCAGGATGTGGCCACCAAATAGGGGAGGCAACGCCAACTCTGAGCCTGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGAGGCAGGGAAAGGCTCAGGggccctggatcctggacccccagccccttctcccactgaaccaggagcccagacccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55899370 174 + 60714840 CTCTCCAGGATGTGGCCACCAAATAGGGGAGGCAACGCCAACTCTGAGCCTGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGGGGCAGGGAAAGGCTCAGGggctctggatcctggacccccagccccttctcccactgaaccaggagcccagacccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102663221 174 - 106955855 CTCTCCAGGATGTGGCCACCAAATAGGGGAGGCAACGCCAACTCTGAGCCTGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGGGGCAGGGAAAGGctcaggggccctggatcctggacccccagccccttctcccactgaaccaggagcccagacccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59947905 174 + 64156825 CTCTCCAGGATGTGGCCCCCAAATAGGGGAGGCAGCGCCAACTCCGAGCCCGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGGGGCAGGGAAAGGGTCAGGggccctggatcctggactcccagtcccttctcccactgaaccaggagcccaaacccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54951849 174 + 59248254 CTCTCCAGGATGTGGCCCCCAAATAGGGGAGGCAGCGCCAACTCCGAGCCCGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGGGGCAGGGAAAGGGTCAGGggccctggatcctggactcccagtcccttctcccactgaaccaggagcccaaacccc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46789239 174 + 50890351 CTCTCCAGGATGTGGCCCCCAAATAGGGGAGGCAGCGCCAACTCCGAGCCTGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGGGGCAGGGAAAGGCTCAGGggccctggatcctggactcccagtcccttctcccactgaaccaggagcccaaacccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45360959 174 + 49145316 CTCTCCAGGATGTGGCCACCAAATAGGGGAGGCAACGCCAACTCTGAGCCTGGTGGCGCTGAAAACTCCTCAAAGCCCACGGCTGCCATGGTCCTAAGGGGCAGGGAAACGCTCAGGGGCCCTGGATCCTGgattctcagcccctcttcccattgaaccagcagcccaaacccc i calJac3.chr22 M 682 I 513 s mm10.chr7 3628993 170 + 145441459 CTTTCTAGGATGTGGCCACCAAACAGGGGAGGCAGAGCCAGCTCTGAGCCTGGTGGCGCTGAGAACTCTTCAAAGCCCACGGCTGCCATGGTCCTGTAGGGCCAAGAA--GTTTTAGGAGCCTATATTCTGGCTCTCCAAGTCC--CTCCCAGGGGGACTTAGGTCCAGGCCCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19587102 135 - 122678785 CTCTCCAAAATGTGACCACCGAACAGCGGCGGCAGCGCCAGCTCCGAGCCTGGCGGCGCCGAGAACTCTTCAAAGCCCACGGCTGCCATGGTCCTGTAAGGTCAGTAG--GTTCAGGA-------ATCCTGAACCACCGGCCCC------------------------------ i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47083863 393 + 51301725 I a score=-11311.000000 s hg38.chr19_GL949747v2_alt 89274 4 + 729520 aa-------------------------------------cc s panTro4.chr19 59022833 4 + 63644993 aa-------------------------------------cc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55899544 41 + 60714840 aaccccttttccctcagacctgggagtccaggcccccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102663395 41 - 106955855 aaccccttttccctcagacctgggagtccaggcccccagcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59948079 4 + 64156825 ag-------------------------------------cc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54952023 4 + 59248254 ag-------------------------------------cc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46789413 4 + 50890351 ag-------------------------------------cc i chlSab2.chr6 C 0 I 148 s calJac3.chr22 45361646 4 + 49145316 ag-------------------------------------cc i calJac3.chr22 I 513 C 0 s mm10.chr7 3629163 2 + 145441459 AG--------------------------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19587237 4 - 122678785 AG-------------------------------------CC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47083863 393 + 51301725 I a score=2904465.000000 s hg38.chr19_GL949747v2_alt 89278 1046 + 729520 cctcctccc--------------------------------------------------------------------------tgagatcctagaatccaggcccccagcccctcctccctc---agaccgtagaatcca-gctcccag-ccctcctccctcagacccagaagtccaagtccgcaacccacccttcgcagcacccacagggttcaagccctgaccccc-tcctcccaggatgcaagagtccagacctccagactttttctctccaaggacc-cagggagtccaagccccaaccctcaaccagacgcaagagtcctggcttccaacctccta-gtctgtcagatccagcagtc---caaacccctaaccttctcctccctcagGAT-----------GACCCCAGT----CCATAAA---------------------------------------------------------------------------------AGGGTTCTAAGGTAAAGCAGTTGCATGAACTACAACCCCCATCAGACCTCAGCGTAAAAGCTCAT-ATGGTTGCACAC-AATGCAGCTGCACTGTTTTCTGGGATTCGCACTTTTTCACAAGGGCTCAGCCACATACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCGGGCCTCAGAGCTTCCGACCTCTTCAATCTGTAGGTTAAGCCGTTCGCAAAACTACTTGTCCCATCAGGCTCAGCAGCCGAGGACGGCGGGACGTGGCC-CTAGGCCTTGTGGGAGTTGTAGTTTCCTGTTTCCGGCTTCGCT-------TCGGCCCACCCCCACGTCCACCCCGAAT----CCCTGCTTAAAGGCCTTGCTTTCTTGTCTAACGCCGCAACCAGTCCTCTGAGTTGCCAACGTCTTTCTTCTTGTCTCGACGCCCCGTCGTCCGGCCACAGCGATTCTCTGCTTAGCAGGATCGGTCCACAGCGGGACGTGAGT---------CCCTTTCCTCCTCGCGGCTTACCGCCTCTCTCCGCCTAGTGCCAGGTGCTAATAAAGTTGTTGTTTCAAATGCGGCCAGGAACATCGCGA--GCGGGGACCAATCAGAGAGTAGCTTTGCCTCTATAACGGCGCGAGAGTGAGACGTCATCGGTGAGCGACTAACGCT-------------------AGAAACAGTGGTGCGCGGAGAGGAGAGGTGAGTGTGATGGAGACCA-CGGGGAGCGGGAGGC s panTro4.chr19 59022837 1065 + 63644993 cctcctccc--------------------------------------------------------------------------tgagatcctagaatccaggcccccagcccctcctccctc---agaccgtagaatcca-gcccccag-ccctcctccctcagacccagaagtccaagtccgcaacccacccttcgcagcacccacagggttcaagccctgaccccc-tcctcccaggatgcaagagtccagacctccagactttttctctccaaggacc-cagggagtccaagccccaaccctcaaccagacgcaagagtcctggcttccaacctcctc-gtctctcagatccagcggtc---caaacccctaaccttctcctccctcagGAT-----------GACCCCAGT----CCATAAA---------------------------------------------------------------------------------AGGGTTCTAAGGTAAAGCAGTTGCATGAACTACAACCCCCATCAGACCTCAGCGTAAAAGCTCAT-ATGGTTGCACAC-AATGCAGCTGCACTGTTTTCTGGGATTCGCACTTTTTCACAAGGGCTCAGCCACATACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCGGGCCTCAGAGCTTCCGACCTCTTCAATCTGTAGGTTAAGCCGTTCGCAAAACTACTTGTCCCATCAGGCTCAGCAGCCGAGGACGGCGGGACGTGGCC-CTAGGCCTTGTGGGAGTTGTAGTTTCCTGTTTCCGGCTTCGCT-------TCGGCCCACCCCCACGTCCACCCCGAAT----CCCTGCTTAAAGGCCTTGCTTTCTTGTCTAACGCCGCAACCAGTCCTCTGGGTTGCCAACGTCTTTCTTCTTGTCTCGACGCCCCGTCGTCCGGCCACAGCGATTCTCTGCTTAGCAGGATCGGTCCACAGCGGGACGTGAGT---------CCCTTTCCTCCTCGCGGCTTACGGCCTCTCTCCGCCTAGTGCCAGGTGCTAATAAAGTTGTTGTTTCAAATGCGGCCAAGAACATCGCAA--GCGGGGACCAATCAGAGAGTAGCTTTGCCTCTATAACGGCGCGAGAATGAGACGTCATCGGTGAGCGACTAACGCTCTGGGAAAGCTTATTTCCTAGAAACAGTGGTGCGCGGAGAGGAGAGGTGAGTGTGATGGAGACCA-GGGGGAGCGGGAGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55899585 1065 + 60714840 cctcctccc--------------------------------------------------------------------------tgagatcctagaatccaggcccccagcccctcctccctc---agaccgtagaatcca-gcccccag-cccttctctctcagacccaggagtccaagtgcgcaactcccccttcgcaacacccacagggttcaagccctgaccccc-tcctcccaggatccaagagtccagacctccagactttttctctccaaggacc-caggcagtccaagccccaaccctcaaccagacgcaagagtcctggcttccagcctcctc-gtctctcagatccagcagtc---caaacccctaaccttctcctccctcagGAT-----------GACCCCAGT----CCATAAA---------------------------------------------------------------------------------AGGGTTCTAAGGTAAAGCAGTTGCATGAACTACAACCCCCATCAGACCTCAGCGTAAAAGCTCAT-ATGGTTGCACAC-AATGCAGCTGCACTGTTTTCTGGGATTCGCACTTTTTCACAAGGGCTCAGCCACATACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCGGGCCTCAGAGCTTCCAATCTGTTCAATCTGTAGGTTAAGCCGTTCGCAAAACTACTTGTCCCATCAGGCTCAGCAGCCGAGGACGGCGGGACGTGGCC-CTAGACCTTGTGGGAGTTGTAGTTTCTTGTTTCCGGCTTCGCT-------TCGGCCCACCCCCACGTCCACCCCGAAT----CCCTGCATAAAGGCCTTGCTTTCTTGTCTAACGCCGCAACCAGTCCTCTGAGTTGCCAACGTCTTTCTTCTTGTCTCGACGCCCCGTCGTCCGGCCACAGCGATTCTCCGCTTAGCAGGATCGGTCCACAGCGGGCCGTGAGT---------CCCTTGCCTCCTCGCGGCTTACCGCCTCTTTCCGCCTAGTGCCAGGTGTTAATAAAGTTGTTGTTTCAAATGCGGCCAGGAACATCGCGA--GCGGGGACTAATCAGAGA-TAGCTTTGCCTCTATAACGGCGCGAGAATGAGACGTCATCGGTGAGCGACGAACGCTCTGGGAAAGCTTATTTCCTAGAAACAGTGGTGCGCGGAGAGGAGAGGTGAGTGTGATGGAGACGAGGGGGGAGCGGGAGGC i ponAbe2.chr19 C 0 M 672 s nomLeu3.chr10 102663436 1148 - 106955855 cctcttccc--------------------------------------------------------------------------tgagatcctagaatccaggcccccagcccctcctccctc---agaccgtagaatcca-gcccccag-ccctcctccctcagacccaggagtccaagtccgcaaccccgctttcgcagcacccacaaagttcaagccctgaccccc-tcctcccaggatgcaagagtccagacctccagactttgtctctccaaggacc-cagggagtccaagccccaaccctcaaccagacgcaagagtcctggcttccaacctcctc-gtctctcagatccagcagtc---caaacccctaaccttctcctccctcagGAT-----------GACCCCAGT----CCATAAAAGGGTTCTAAGGTAAAGCAGTTGCATGAAGGTCCATGAAGCAGTTGCATCTAAGGTCCCAGTCCAGACCCCAGTCCATAAAAGGGTTCTAAGGTAAAGCAGTTGCATGAACTACAACCCCCATCAGACCTCAGCGTAAAAGCTCATAATGATTGCATAC-AATGCAGCTGCACTGTCTTCTGGGATTCGCACTTTTTCACAAGGGCTCAGCCACATACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCGGGCCTCAGAGCTTCCAACCTCTTCAATCTGTAGGTTAAGCCCTTCGCAAAACTACTTGTCCCATCAGGGTCAGCAGCCGAGGACAGCGGGACGTGGCC-CTAGGCCTTGTGGGAGTTGTAGTTCCCTGTTTCCGGCTTCGCT-------TCGGCCTACCCCCACGTCCACCCCGAAT----CCCTGCTTAAAGGCCTTGCTTTCTTGTCTAACGCCGCAACCAGTCCTCTGAGTTGCCAACGTCTTTCTTCTTGTCTCGACGTCCCGTCGTCCGGCCACAGCGATTCTCCGCTTAGCAGGATCGGTCCATAGCGGGCCGTGAGT---------CCCTTTCCTCCTCGCGGCTTACCGCCTCTCTACGCCTAGTGCCAGGTGCTAATAAAGTTGTTGTTTCAAATGCGGCCAGGAACATCGCGA--GCGGGGACCAATCAGAAAGTAGCTTTGCCTCTATAACGGCGCGAGAGTGAGACGTCATCGGTGAGCGACGAACGCTCTGGGAAAGCTTATTTCCTAGAAATAGTGGTGCGCGGAGAGGAGAGGTGAGTGTGATCGAGACAAGAAGGGAGCGGGAGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59948083 1159 + 64156825 ccttttccctaagacctgggagtccaggcccccagctcctaatccctcagaccctagaatccaggcccccagcccctcctccctcagacccagggatccaggcccccagcccttcctccctc---agaccgtagaatccaggcccccag-ctctcctccctcagacccaggagaccaggtccccaacccctccttcgtagcacccacagggttcaagccctgaccccc-tcctcccaggatccaagagtccagacctccagactttttctctccaaggacc-cagggagtccaagccccaaccctcaaccagacgcaagagtcctggcttccaacctcctc-gtctctcagatccagcagtc---caaacccctagccttctcctccctcaggatgcaccagtccagaccccAGT----CCATAAA---------------------------------------------------------------------------------AGGGTTCTAAGGTAAAGCAGTTGCATGAACTACAACCCCCATCAGACCTCAGTGTAAAAGGTCAT-ATGGTTGCACAC-AATGCAGCTG--CTGTTTTCTGGGATTCGCAGTTTTTCACAAGGGCTCAGCCACTTACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCGGGCCTCTTAGCTTCCAACCTCTTAAATCTCTAGATTAAGCCGTTCACAAAACTACTTGTCCCATCAGGCTCAGGGGCCGAGGACGGCGGGACGTGGCC-CTAGGCCTTGTGGGAGTTGTAGTTTCCTGTTTCCGGCTTCGCT-------TTGGCCCACCCCGACGTCCAACCCGAAT----CCCTGCTTAAAGGCCTTGCTTTCTTGTCTAACGTCGCAACCAGTCCTCTGAGTTGCCAACGTCTTTCTTCTTGTCTCGACGCCCCGTCATCTGGCCACAGCAATTCTCCGCTTAGCAGGATTGGTCCACAGCGCGCCGTGAGTTCGATTAGCCCCTTTCCTCCTCGCTGCTTACCGCCTCTCTCCGCCTAGTGCCAGGTGCTAATAAAGTTGTTGTTTCAAACGCGGCCAGGAACATCGCGA--GCGGGGACCAATCAGAGCGTAGCTTTACCTCTATAACGGCGCGAGCATGAGACGTCATCGGTGAGCGACGAACGCTGTGGGAAAGCTTATTTCCTAGAAACAGTGGTGCGCGGAGAGGAGAGGTGAGTGTGATGGAGACGAGCGGGGAGCGGGAGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54952027 1159 + 59248254 ccttttccctaagacctgggagtccaggcccccagctcctaatccctcagaccctagaatccaggcccccagcccctcctccctcagacccagggatccaggcccccagcccttcctccctc---agaccgtagaatccaggcccccag-ctctcctccctcagacccaggagaccaggtccccaacccctccttcgtagcacccacagggttcaagccctgaccccc-tcctcccaggatccaagagtccagacctccagactttttctctccaaggacc-cagggagtccaagccccaaccctcaaccagacgcaagagtcctggcttccaacctcctc-gtctctcagatccagCAGTC---CAAACCCCTAGCCTTCTCCTCCCTCAGGATGCACCAGTCCAGACCCCAGT----CCATAAA---------------------------------------------------------------------------------AGGGTTCTAAGGTAAAGCAGTTGCATGAACTACAACCCCCATCAGACCTCAGTGTAAAAGGTCAT-ATGGTTGCACAC-AATGCAGCTG--CTGTTTTCTGGGATTCGCAGTTTTTCACAAGGGCTCAGCCACTTACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCGGGCCTCTTAGCTTCCAACCTCTTAAATCTCTAGATTAAGCCGTTCACAAAACTACTTGTCCCATCAGGCTCAGGGGCCGAGGACGGCAGGACGTGGCC-CTAGGCCTTGTGGGAGTTGTAGTTTCCTGTTTCCGGCTTCGCT-------TTGGCCCACCCCGACGTCCAACCCGAAT----CCCTGCTTAAAGGCCTTGCTTTCTTGTCTAACGTCGCAACCAGTCCTCTGAGTTGCCAACGTCTTTCTTCTTGTCTCGACGCCCCGTCATCTGGCCACAGCAATTCTCCGCTTAGCAGGATTGGTCCACAGCGGGCCGTGAGTTCGATTAGCCCCTTTCCTCCTCGCTGCTTACCGCCTCTCTCCGCCTAGTGCCAGGTGCTAATAAAGTTGTTGTTTCAAACGCGGCCAGGAACATCGCGA--GCGGGGACCAATCAGAGCGTAGCTTTACCTCTATAACGGCGCGAGCATGAGACGTCATCGGTGAGCGACAAACGCTGTGGGAAAGCTTATTTCCTAGAAACAGTGGTGCGCggagaggagaggtgagtgtgatggagacgagcggggagcgggaggC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46789565 1078 + 50890351 cctcctccc--------------------------------------------------------------------------tcagatccagggatccaggcccccagcccctcctccctc---agaccgtagaatccaggcccccag-ctctcctccctcagacccaggagaccaggtccccaacccctccttcgtagcacccacagggttcaagccctgacccccgtcctcccaggatccaagagtccagacctccagactttttctctccaaggacc-cagggagtccaagccccaaccctcgaccagacgcaagagtcctggcttccaacctcctc-gtctctcagatccagCAGTC---CAAACCCCTAGCCTTCTCCTCCCTCAGGATGCACCAGTCCAGACCCCAGT----CCATAAA---------------------------------------------------------------------------------AGGGTTCAAAG--------GTTGCATGAACTACAACCCCCATCAGACCTCAGTGTAAAAGCTCAT-ATGGTTGCACAC-AATGCAGCTG--CTGTTTTCTGGGATTCGCAGTTTTTCACAAGGGCTCAGCCACTTACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCAGGCCTCTTAGCTTCCAATCTCTCAAATCTCTAGATTAAGCCGTTCGCAAAACTACTTGTCCCATCAGGCTCAGGGGCCGAGGACGGCGGGACGTGGCC-CTAGGCCTTGTGGGAGTCGTAGTTTCCTGTTTCCGGCTTCGCT-------TTGGCCCACCCCGACATCCAACCCGAAT----CCTTGCTTAAAGGCCTTGCTTTCTTGTCTAACGTCGCAACCAGTCCTCTGAGTTGCCAACGTCTTTCTTCTTGTCTCGACGCCCCGTCATCTGGCCACAGCAATTCTCCGCTTAGCAGGATTGGTCCACAGCGGGCCGTGAGTTCGATTAGCCCCTTTCCTCCTCGCTGCTTACCGCCTCTCTCCGCCTAGTGCCAGGTGCTAATAAAGTTGTTGTTTCAAACGCGTCCAGGAACATCGCGA--GCAGGGACCAATCAGAGCGTAGCTTTACCTCTATAACGGCGCGAGCATGAGACGTCATCGGTGAACGACGAACGCTGTGGGAAAGCTTATTTCCTAGAAACAGTGGTGCGCggagaggagaggtgagtgtgatggagaccagcggggagcgggaggC i chlSab2.chr6 I 148 C 0 s calJac3.chr22 45361650 1083 + 49145316 cctcctcct--------------------------------------------------------------------------tcagaccctagaatcca-gcccccagcccctcctccctcagaagacccaggagtccaggtactcagcccctcctgccacagacccaggagtccaggtccccagcccctccttcccagcacccacagggttcaagccctgatcccc-t-ctcccaagatccaagagtccagacctccagactttttctctccaaggacc-cagggagtccaagtcccaaccctcacctagacgcaggagtccagggttccaacctcctc-gtc--tcagatccagcagta---caaacccctagccttctcctctctcgggatgcaccggtgcagacctcagc----ccATAAA---------------------------------------------------------------------------------AGGGTTCTAAGGTAAAGCTGCTGCAAGAACTACAACCCCCATCAGCCCTCAAAGTAAAAGGTCAT-ATGGTTGCACACAAATGTAGATGCAGTGTCTTCTGGGATTCGCAGTTTTTCACAAGGGCTCAGCCACTTACCCCTCTCTCTGCTCCAATTCCATCTC---CGCGAGCTCCGGGAGCCCCGCGCCTCACAACTTCCAACGTCTCAAATCTCTATGTTAAGCCGTTCCCAAAACTACTTGTCCCATCAGGCCCCGCGGCCGAGGACGGCGGGACGTGGCT-CTAGACCTTATGGGAGTTGTAGTTTCTTGTTTCCGGCTTCGCT-------TCCGCCAACCCCCACGTCCACCGCGAAT----CCCTACTTAAAGGCCTTGCGTTCTCATCTGAGGCCGCAACCAGTCCTCTGAGTTGCCACAGTCTTTCTTCTTGTCTCGATGCCCCGTCGTCCAGCCACAGCGATTCACCGCTTAGCAGGATCGGTCCACAGCGGGCCGTGAGTCTGATTAGCCCCT---CTCCTTGCTGCTTACCGCCTCTCTCCGCCTAGCGCCAGGTGCTAATAAAGTTGTTGTTCCAAACGCGGCCAGGAACGTCGCGA--ACGGGGACCAATCAGAGATCAGCTTTCCCTCGATAACGGCGCGAGTGTGAAACGTCATCGGTGAGCGACGAGCGCTCTGG--AAGCTTATTTCTTAGAAACCGTGGTGCGCAGGGAGGAGAGGTGAGTGTGGTAGAAACGAGGAGAGGGCGGGAGGC i calJac3.chr22 C 0 C 0 s mm10.chr7 3629165 926 + 145441459 -----------------------------------------------------------------------------------------CCTGGAGCCCAGATCCTAGCCCTCTCCTCCATC---ACACCCAGCAGCCCA-GACTCTAG-CCCTCCTCCCTCCTACCAAGAAGCCCAGACCCT--AGCCCTTCTTGGTCACTGCCA-GGGATCCAGGCCCCAGTCCTC-GTCCCTAACAAT---------------------------------GAGGAAT-CAG---ACCCTAGCCTCCTCCCTC----AGACTTTGGAGCCCACAC-TCCAATCTCCTT-G-CTCTCAGATCCATAAGAACAGCAAATTCCAAA------TCTCCCCTACGATGCTCCAGTACTGCCTCCGGTTCTCCCACAGA-----------------------------------------------------------------------------------GATTCGAAAAGAAAGCAACTGCACGAACT----TCCCCATCGTCCCTGAGAGCA-------CT-ACAGCCG------ATCGTTGCTG------TTTTTGGAGTCCCCG--TTTACACAA-AGCTCAGCTACTCACCCCTCTCTCTGTTCCAACTCCATTTC---TCTGGTCAAGAGACACCTCAAGCCTCAGAG---------------------AGGTGGAGTCTTGCGCAAAACTACCTCTCCCATCAGGCCTTGCGACACAGGAAAAC----------------------TGGGAATTAAAGTTTCCTA-CTCTGCCTTCGTT-------TGCACCCG-----------ACTCCAAAT----TGCGGCTTGAAGCCTTCGGTTTATCCTCTAGCGCCTGCACCGATCGTCCACGTTGTCACCTTCTTTACTCCTGTCTTGTCGCAGTGTCGACTAGCCAAAGCGAATCTCTGTTTAGCAGGCTCAATCCACGGCGACGTACGACTTCCCCTAGCCCTAGAACCCAGCACTCCCGGTCGCCGTCCCGCGA-----GGCGGCTGCTAATAAAGTTGTTG-TCCAAACGCTGCCGGAAATGTCGTAA--ACGG---CCAATCAAAACACAGATTTATCG----------GCGGCAAGTAAACGTCATCAAAGAGAGCCGAA-GCTCTGGGGAAGCAGATTTCTTGGAAACGATTGTGAGAGGATCGAAGCGGTGAGTGTGATGGAGAAGAAGGGATGGCCGGAAGC i mm10.chr7 C 0 C 0 s canFam3.chr1 19587241 1015 - 122678785 TCTCCTCCC--------------------------------------------------------------------------TCAGCCCCGGGAGTCCAGATCCCCAGCCCCTCCTCCCTC---AGACCCGGGAGTCC-----------CACT-----------------------------------------------------AGAGTTCGAGCCCCGACCCC--TCCTCCCAGGATCCAGGTGTCCATACCCCCAGACTT--GCTCCCCGAGGATCGCAGGGACTTCAAGCCCCCACTC------AGACCCAGGAGCCGGGGCCTCCAACCTCGTCTGTCTCTCAGATTCAGAACTC---C-AACTCCTAGCTTTTTTCCCCCT--GGACGTCCAAGCGCAGACCCCGGT----CCTTAAG---------------------------------------------------------------------------------AGGGCTC--AGCGAAAGCAGCTGCATGAACTACAATCCCCATCCGCCCTCAA-ATAAAAGCGCAG-ATGGGTGTACGC-GATGCAGCCGCAATGCCTTTTGGGAGCGGTAGTTTCCTCCAA------AGCCACTCACCCCTCTCTCTGCTCCAATTCCATGTCTCTCTCCAGCTCCAGCCGCCGCGGGTCTCAGAACGCCCAGCCTCGCAAACCTCTAGGTTAAGTCCTTCGCAAAACTACCTGTCCCATCGGGCTTCACGGCCTCGGCATCCGGGTCATTGCCGCTGGGTTTTCTGGGAATTGTAGTTCCCTGCTTCCGGCTTCGCTCCTTACCCCCGTCCACCTTCACCTCCACCCGGAGTTCCGCCCTGCTTAAAGGCCTTGCTTTCTCATCTCACTCCTTCCTCGGTCGTCTTAGTTGTCCCCGTCTTTATTCTTGTCTGGGCACCTTCTCA-CTGGCTAGGGCGATGCTCCGCTTAGCAGGCTCAGTACTCGGCGGGCCGTCAGCCCGACAAGTCCCTT--CTCCT--CTGCTTACC-CCCCTCTCCGCTTCGCTGCAGGAACTAATAAAGTTGTTGTTCCAAAGGCGTCCGGGAATGACGCGAGGGCGGGAGCCAATCAGAGCGCGGGTTTGACGCGACGCCGTCGCGAGCCTGGGACGTCATCAGTGGGCGCCGACCACTGTTCGGAAGCGACGCTCCTAGAAACCGTCGTGCGAGGCGGGGAGAGGTGAGTGTAAGCGAGACGAGGGGAGTG-GGGAGGC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47083863 393 + 51301725 I a score=62517.000000 s hg38.chr19_GL949747v2_alt 90324 29 + 729520 TGGGCTCCTGGGTCTGGGAGAAGAAGTGT s panTro4.chr19 59023902 29 + 63644993 TGGGCTCCTGGGTCTGGGAGAAGAAGTGT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102664584 29 - 106955855 CGGGCTCCTGGGTCTGGGAGAAGAAGCGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59949242 29 + 64156825 CGGACTCCTGGGTCTGGGAGAAGAAGTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54953186 29 + 59248254 CGGACTCCTGGGTCTGGGAGAAGAAGTGT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46790643 29 + 50890351 CGGACTCCTGGGTCTGGGAGAAGAAGTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45362733 25 + 49145316 CAGACTCCTGGGTCTGGGAGAAGA----C i calJac3.chr22 C 0 C 0 s mm10.chr7 3630091 23 + 145441459 CAAGCTA------CTGGAGGAGAAAGTGT i mm10.chr7 C 0 I 232 s canFam3.chr1 19588256 29 - 122678785 CGGGCTCTCGGGTCCGGGGGCGGGAGTGT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55900650 672 + 60714840 M e papAnu2.chr19 47083863 393 + 51301725 I a score=42275.000000 s hg38.chr19_GL949747v2_alt 90353 21 + 729520 GTGAGGAAAAAGGCGGGTCTT s panTro4.chr19 59023931 21 + 63644993 GTGAGGAAAAAGGCGGGTCTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102664613 21 - 106955855 GTGAGGAAAAAGGCAGGCCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59949271 21 + 64156825 GTGAGGAGGAAGGCGGGCCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54953215 21 + 59248254 GTGAGGAGGAAGGCGGGCCTT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46790672 21 + 50890351 GTGAGGAGGAAGGCGGGCCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45362758 21 + 49145316 GTGAGGAGAAAGGCGGACCTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19588285 21 - 122678785 GCAGGGAGAGAGACACACCTT i canFam3.chr1 C 0 I 1428 e mm10.chr7 3630114 232 + 145441459 I e ponAbe2.chr19 55900650 672 + 60714840 M e papAnu2.chr19 47083863 393 + 51301725 I a score=434896.000000 s hg38.chr19_GL949747v2_alt 90374 262 + 729520 TACAGCTTGGtttttgtttttttgttgtttgtttgttttgagacggagtctcgttctgttgcccaggttggagagcagtggcgcgatctcggctcattgcaacctccgtctcccgggttcaaacgattcttctgcctcagcctccagagtagctgggattacaggcgcccgccaccacccctgactaatttttgtatttttagtagagacggggtttccccatgttggtcaggctggtctcgaactcctgatctc--gtgatcc s panTro4.chr19 59023952 262 + 63644993 TACAGCTTGGtttttgtttttttgttgtttgtttgttttgagacggagtctcgttctgttgcccaggttggagagcagtggcgcgatctcggctcattgcaacctccgtctcccgggttcaaacgattcttctgcctcagcctccagagtagctgggattacaggcgcccgccaccacccttgactaatttttgtatttttagtagagacggggtttccccatgttggtcaagctggtctcgaactcctgatctc--gtgatcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102664634 262 - 106955855 TACAGCTTGGtttttgtttttttgttgtttgtttgttttgagacggagtctcggtctgttgcccaggttggagagcagtggcgcgatctcggctcactgcaacctccgtctcccgggttcaaacgattctcctgcctcagcctccagagtagctgggattacaggcgcccgccaccacccctggctaatttttgtatttttagtagatacgtggtttccccatgttggtcaggctggtctcgaactcctgatctc--gtgatcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59949292 262 + 64156825 TACAGCTTGGtttttttgttgttgttgtttgtttgttttgagacggagtctcggtctgttgcctagggtggagtgcagtggcgctatctcggctcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctccagaatggctgggattacaggcgcgcgccaccacgcccggctaatttttgtatttttagtagggacgaggtttccccatgttggtcaggctggtctcgaactcctgatctc--ttgatcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54953236 262 + 59248254 TACAGCTTGGtttttttgttgttgttgtttgtttgttttgagacggagtctcggtctgttgcctaggttggagtgcagtggcgcgatctcggctcactgcaacctccgtctccagggttcaaacgattctcctgcctcagcctccagaatggctgggattacaggcgcgcgccaccacgcccggctaatttttgtatttttagtagggacgaggtttccccatgttggtcaggctggtctcgaactcctgatctc--ttgatcc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46790693 258 + 50890351 TACAGCTGGGtttttttgttgttg----ttgtttgttttgagacggagtctcggtctgttgcctaggttggagtgcagtggcgcgatctcggctcattgcaacctccgtctccagggttcaaacgattctcctgcctcagcctccagagtagctgggatgacaggcgcgcgccaccacgcccggctaatttttgtatttttagtagggacgaggtttccccatgttggtcaggctggtctcgaactcctgatctc--ttgatcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45362779 247 + 49145316 TACAGtttgtttgttttttt---------------tcttgagacggagtctcactctgttgccccggct-gagcgcagtggcgcgatctcggctcactgcaacctccgcctcccgggttcaagcagtt-tcctgcctcagcctcccgagtagctgggataacaggcgcacggcaccacgcgcagctaatttttgtatttttagtagagacggggtttccccatgttggtcaggctggtgtcgaactcctgaccccaggtgatcc i calJac3.chr22 C 0 C 0 e mm10.chr7 3630114 232 + 145441459 I e canFam3.chr1 19588306 1428 - 122678785 I e ponAbe2.chr19 55900650 672 + 60714840 M e papAnu2.chr19 47083863 393 + 51301725 I a score=127922.000000 s hg38.chr19_GL949747v2_alt 90636 57 + 729520 gcccgcctcggcctcccaaagtgctgtgattacaggcatga-tccaccgcgcctggcc s panTro4.chr19 59024214 57 + 63644993 gcccgcctcggcctcctaaagtgctgtgattacaggcatga-tccaccgcgcctggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55901323 58 + 60714840 gcccgcctcggcctcccaaagtgctgtgattacaggcgtgaccccaccgcgcctagcc i ponAbe2.chr19 M 672 C 0 s nomLeu3.chr10 102664896 57 - 106955855 gcccgcctcggcctcccaaagtgctgtgattacaggcgtga-cccaccgcgcctggcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59949554 57 + 64156825 gcccgcctcggcgtcccaaagtgctgtgattacaggcgtgc-cccaccgcgcctggcA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54953498 57 + 59248254 gcccgcctcggcgtcccaaagtgctgtgattacaggcgtga-cccaccgcgcctggcA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46790951 57 + 50890351 gcccccctcgacgtcccaaagtgctgtgattacaggcgtga-cccaccgcgcctggcA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45363026 57 + 49145316 tcccacctcggcctcccaaagtgctgggattacaggcgcga-gacaccgagcctggcc i calJac3.chr22 C 0 I 3219 e mm10.chr7 3630114 232 + 145441459 I e canFam3.chr1 19588306 1428 - 122678785 I e papAnu2.chr19 47083863 393 + 51301725 I a score=1311539.000000 s hg38.chr19_GL949747v2_alt 90693 751 + 729520 AG---------ttgtttgtttgttttgtctgagacggagtttcgctcttgttgcccaggctggagtgcagtggcgcgatctcggttcactgcaacctccgcctcccggattcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcgcaccaccacgcccggctagttttttgtatttttagtagagacggggtttcactatgttggccaggctggtctccaactcctgacctcagatgatccacccgcctgggcctcccaaagtgctgggattacaggcatgagccaccgctcccggccTTTTACAGCCTGtttacccaaaagtcttaatatgcgcctaccatggtgtggccctggggatgtggaaggagcaaaaattgttcgctaccctcttagagctttggttgatgcctggcagaca--------------------------------------------------------------ggctttatcaaataattacttcattaatcacaaatgtgtgaagtgccttactgtagacacgcagagcgtgcgggacacgttatcacaaagcaacctcctgtagtctagagtggggcgtgtgggtcagggaggtggaacgtgagagctgaaggctgaggagatgctgggctactaagaagtgaggagagccagacgccatggctcactcctgtaatcccagcactttgggtggcccaggcgaaaggatcgcttgagcccaggagtttgagaccagcctgagcaacacagtgagaccctgtctctacagaaaaatttaaaaattagc s panTro4.chr19 59024271 736 + 63644993 AA---------ttgtttgtttgttttgtctgagacgaagtttcgctcttgttgcccaggctggagtgcagtggcgcgatctcggttcactgcaacttccgcctcccggattcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcgcaccaccacgcccggctagttttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctccaactcctgacctcaggtgatccacccgcctgggcctcccaaagtgctgggattacaggcatgagccaccgctcccggc-TTTTACAGCCTGtttacccaaaagtcttaatatgcgcctaccatggtgtggccctggggatgtggaaggagcaaaaattgttcgctaccctcttagagctttggttgatgcctggcagaca--------------------------------------------------------------ggctttatcaaataattacttcattaatcacaaatgtgtgaagtgccttactgtagacacgcagagcgtgcgggacacgttatcacaaagcaacctcctgtagtctagagcggggcgtgtgggtcagggaggtggaacgtgagagctgaaggctgaggagatgctgggctactaagaagtgaggagagccggacgccatggctcactcctgtaatcccagcactttgggtggcccaggcgaaaggatcgcttgagcccag--------------cctgagcaacacagtgagaccctgtctctacagaaaaatttaaaaattagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55901381 760 + 60714840 CAGttgtttgtttgtttgtttgctttgtctgagacgaagtttcgctcttgttgcccaggatggagtgcagtggcgcgatctcggttcactgcaacctcctcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcatgcaccaccacacccagctaattttttgtatttttagtagagacagagtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccgcctgggcctcccaaagtgctgggattacaggcatgagccactgcccctggccTTTTACATCtcgtttacccaaaagtcttaatatgcgcctaccatggtgtggccctggggatgtggaaggagcaaaaattgttccctgctctcttagagctttggttgatgcctggcagaca--------------------------------------------------------------ggctttatcaaataattacttcattaatcacaaatgtgtgaagtgccttactgtagacacgcagagcgtgcgggacacgttatcacaaagcaacctcctgtagtctagagtggggcgtgtgggtcagggaggtggaacgtgagagctgaaggctgaggagatgctgggctactaagaagtgaagagagccagacgccatggctcactcctgtaatcccagcactttgggtggcccaggcaaaaggatcacttgagcccagaagttggagaccagcctgagcaacacagtaagaccctgtctctacagaaaaatttaaaaattagc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102664953 748 - 106955855 AG-----ttgtttgtttgtttgttttgtccgagacgaaatttcgctcttgttgcccaggatggagtgcagtggtgcgatctcggttcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcgcaccaccacacccagctaattttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctggaacccctgacctcaggtgatccacccgcctgggcctctcaaagtgctgggattacaggcatgagccaccgcgcctggccTTTTACAGCTTGTTTACCCAAAAGTCttaatatgcgcctaccatggtgtggccctgggaatgtggaaggagcaaaaattgttccctgccctcttagagcttcggttgatgcct----gaca--------------------------------------------------------------ggctttatcaaataattacttcattaatcacaaatgtgtgacgtgccttactgtagacaggcagagcgtgcaggacacg-tatcacaaagcaac--cctgtagtctagagtggggcgtgtgggtcagggaggtggaacgtgagagctgaaggctgaggagatgctgggctactaagaagtgaggagagccagacgccatggctcactcctgtaatcccagccttttgggtggcccacgcaaaaggatcgcttgagcccaggagtttgagaccaacctgagcaacacagtgagaccccgtctctacagaaaaatttaaaaattagc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59949611 754 + 64156825 Ag----tttgtttgtttgtttgttttgtttgagtcgaagtttcactgttgttgcccagaatggagttcaatggcgcgatctcggttcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagccacccgagtagctgggattacaggcgcccgccaccacacccggctaattttttgtatttttagtagagacagggtttcaccatgttggccagactggtctcgaactcctcacctcaggtgatctgcccggctgcgcttcccaaagtgctggaattacaggcatgagccaccgtgcccggccTTTTACAGCTTGTTTACCTAAAAGTCttaatatgctcctaccatggtgtggccctggggatgtggcaggagcaaaaattgttccctgccctctaagagctttggttgatgcctggcagaca--------------------------------------------------------------ggctttatcaaataattacttcattaatcacaaatgtgtgaagtgccttactgtagacacgcagagcctgcgggacacg-tatcacaaagcaacctcctctagtctaaag-ggggcccgtgggtcagggaggtggaatgtgagcgctgaaagctgaagagatgctgggctgctaaggagtgaggagagccagacgcggggggtcactcctgtaatcccagcactttgggtggcccaggcgaaaggatcgcttgagcccaggagtttgagaccagcctgagcaacacagtgagaccccgtctctacagaaaaatttaaaaattagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54953555 754 + 59248254 AG----tttgtttgtttgtttgttttgtttgagacgaagtttcactgttgttgcccagaatggagttcaatggcgcgatctcggttcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcccgccaccacacccggctaattttttgtatttttagtagagacagggtttcaccatgttggccagactggtctcgaactcctcacctcaggtgatctacccggctgggcttcccaaagtgctggaattacaggcatgagccaccgtgcccggccTTTTACAGCTTGTTTACCTAAAAGTCttaatatgctcctaccatggtgtggccctggggatgtggcaggagcaaaaattgttccctgccctctaagagctttggttgatgcctggcagaca--------------------------------------------------------------ggctttatcaaataattacttcattaatcacaaatgtgtgaagtgccttactgtagacacgcagagcctgcgggacacg-tatcacaaagcaacctcctctagtctaaag-ggggcccgtgggtcagggaggtggaatgtgagcgctgaaagctgaagagatgctgggctgctaaggagtgaggagagccagacgcggggggtcactcctgtaatcccagcactttgggtggcccaggcgaaaggatcgcttgagcccaggagtttgagaccagcctgagcaacacagtgagaccccgtctctacagaaaaatttaaaaattagc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46791008 816 + 50890351 AG----tttgtttgtttgtttgttttgtttgagacgaagtttcactgttgttgcccagaatggagttaaatggcgcgatctcggttcactgcaacctccgcctcccgggttcaagcgattttcctgcctcagcttcctgagtagctgggactacaggcgcccaccaccacacctggctaattttttgtatttttagtagagacggggtttcaccatgttggccagactggtctcgaacgcctcacctcaggtgatccacccggctgggcttcccaaagtgctggaatgacaggcatgagccaccgtgcccggccTTTTACAGCTTGTTTACCCAAAAGTcttaatatgggcctaccatagtgtggccctggggatgtggcaggagcaaagattgttccctgccctcttagagcttTGGTTGATGCCTGGCAGACAGGCTTTATCAAATAAtttttttttttttttttttttGACGGANNNNNNNNNNGCGCCCGGCCGGCTTTATCAAATAATTACTTCATTAATCACAAATGTGTGAAGTGCCTTACTGTAGACACGCAGAGCCTGCGGGACACG-TATCACAAAGCAACCTCCTCTAGTCTAAAG-GGGGCCCGTGGGTCAGGGAAGTGGAATGTGAGCGCTGAAAGCTGAAGAGATGCCGGGCTGCTAAGGAGTGAGGAGAgccagacgcggggggtcactcctgtaatcccagcactttgggtggcccaggcgaaaggatcgcttgagcccaggagtttgagaccagcctgagcaacacagtgagaccccatctctacagaaaaatttaaaaattagc i chlSab2.chr6 C 0 C 0 e mm10.chr7 3630114 232 + 145441459 I e canFam3.chr1 19588306 1428 - 122678785 I e calJac3.chr22 45363083 3219 + 49145316 I e papAnu2.chr19 47083863 393 + 51301725 I a score=512817.000000 s hg38.chr19_GL949747v2_alt 91444 239 + 729520 cgggcgtgctggtgcgtgcctgtcatctcagctatcgggaggctgaggcgggagaatcgcttgagcccaggtgatcgaggctgccgtgagctatgatggcgccactgcactgcagcctaggtgacagagcaagacatggtctcaaaaaaaagaaaaga-----------------aaagaaaa-----aacaaagtgaaggaaag---------ggccactttagttacaagggactcc-tgtacaaagacctggaggcgggaagagaccg s panTro4.chr19 59025007 244 + 63644993 cgggcgtgctggtgtgtgcctgccatctcagctatcgggaggctgaggcgggagaatcgcttgagcccaggtggtcgaggctgccgtgagctatgatggcgccactgcactgcagcctaggtgacagagcaagacatggtctcaaaaaaaagaaaaga-----------------aaagaaaagaaaaaacaaagtgaaggaaag---------ggtcactttagttacaagggactcc-tgtacaaagacctggaggtgggaagagaccg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55902141 231 + 60714840 caggcgtgctggtgtgtgcctgtcatctcagctatcgggaggctgaggcgggagaatctcttgagcccaggtggtcgaggctgcagtgagctatgatggcaccactgcactgcagcctaggtgacagagcaagacattgtctcaaaaa---------a-----------------aaagaaaa-----aacaaagtgaaggaaag---------agccactttagttacaagagagtccttgtacaaagacctggaggtgggaagagactg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102665701 237 - 106955855 cgggcgtgctggtgtgtgcctgtcatctcagctatcgcgaggctgaggtgggagaatcgcttgagcccaggtggtcgaggctgccgtgagctatgatggcaccactgcactgcagcctaggtgacaaagcaagacattgtctcaaaaaaaagaa---a-----------------aaagaaaa-----aacaaagtgaaggaaag---------agccactttagttacaaaggactccttatacaaagacctggaggtgggaagaaattg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59950365 248 + 64156825 cgggtgtactg--gtgtgcctgtcatctcagctatcgggaggctgaggtgggagaaccgcttgagcccaggtggtcgaggctgcagggagctatgatggcgccacagcactgcagcctaggtaacagagcaagacattgtctcaaaaaaaaaaaaaaaaaaag------------aaagaaaagaaaaaacaaagcgaaggaaag---------agccaccgtagttacaagggactccttgtacaaagatctggaggtgggaagaaattg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54954309 246 + 59248254 cgggtgtactggtgtgtgcctgtcatctcagctatcgggaggctgaggtgggagaaccgcttgagcccaggtggtcgaggctgcagggagctatgatggcgccacagcactgcagcctaggtaacagagcaagacattgtctcaaaaaaaaaaaaaaga----------------aaagaaaagaaaaaacaaagcgaaggaaag---------agccaccgtagttacaagggactccttgtacaaagatctggaggtgggaagaaattg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47084256 271 + 51301725 CGGGTGTGTTGGTGTgggcctgtcatctcagctatcgggaggctgaggcgggagaaccgcttgagcccaggtggtcgaggctgcagtgagctatgatggcgccacagcactgcagcctaggtaacagagcaagacattgtttcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaaagaaaagaaaaaacaaagcgaaggaaaaaaCGACCTTAGTGACCTTAGTTACAAGGGACTCCTTGTACAAAGATCTGGAGGTGGGAAAAAATTG i papAnu2.chr19 I 393 C 0 s chlSab2.chr6 46791824 229 + 50890351 cgggtgtgctggtgtgtgcctgtcatctcagctatcgggaggctgaggcgggagaaccgcttgaccccaggtggtcgaggctgcagtgagctatgatggcgccacagcactgcagcctaggtaacagagcatgacattgtctccaaaaaaaaaaaaa------------------aaagta---------------gaaggaaag---------aGCCACCGTAGTTACAAGGGACTCCTTGTACAAAGATCTGGAGGTGGGAAGAAATTG i chlSab2.chr6 C 0 I 313 e mm10.chr7 3630114 232 + 145441459 I e canFam3.chr1 19588306 1428 - 122678785 I e calJac3.chr22 45363083 3219 + 49145316 I a score=1782035.000000 s hg38.chr19_GL949747v2_alt 91683 769 + 729520 ATAAtgtaaccaactcaagtttctgctactcagaggc------agaggaagtggggggtggtgaaagtaaagcagctttactgatcaaatgctcgcagatgagaaatggccaagctaatgtctttagaagaccatttcaagctttaggctggggagaggggcttaaaaaggggaactttgaatgggaggcatacaggagtggtgctgggtacaaggtatgtgtgtcttgctccgaaggctgtcttgagtcacgggccacctggagcatgggctggtgtcaagtcaacaatggccacgttgtagattgatcgccttgaggtgatctctggagttttgcagctgggtttccatacctagtttgtttcaagattagcccctgcggcgaggcgcggtggcttacgcctgtaatcccaacagtttgggaggccaaggtgggtcgctcacttgaggtcaagagttcaagaccagcctggcttacatagtgaaaccttgactctac----aaaaaaaaaaaa---------------aaaaaattagctgggcatggtggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcaagtgagccaagactgcgccactgcactccaacctgggtgtcagagccagactccatctttaaaa-aataaataaataaagattagcccctggaacttctaagtaagcacatagataagccagcagtgcaagacagtatctagtgggaaaggagggaaacaaagaattt s panTro4.chr19 59025251 768 + 63644993 ATAAtgtaaccaactcaagtttctgctactcagaggc------agaagaagtggggggtggtgaaagtaaagcagctttactgatcaaatgctcgcagatgagaaatggccaagctaatgtctttagaagaccatttcaagctttaagctggggagaggggcttaaaaaggggcactttgaatgggaggcatacaggagtggtgctgggtacaaggtatgtgtgtcttgctccgaaggctgtcttgagtcacgggccacccggagcatgggctggtgtcatgtcaacaatggccaggttgtagattgatcgccttgaggtaatctctggagttttgcagctgggtttccatacctagtttgtttcaagattagcccctgcggcgaggcgcggtggcttacgcctgtaatcccaacagtttgggaggccaaggtgggtcactcacttgaggtcaagagttcaagaccagcctggcttacatagtgaaaccttgactctac----aaaaaaaaaaaa---------------aaaaa-ttagctgggcatggcggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaatcgtttgaacccaggaggtggaggttgcaagtgagccaagactccaccactgcactccaacctgggtgtcagagccagactccatctttaaaa-aataaataaataaagattagcccctggaacttctaagtaagcacatagataagccagcagtgcaagacagtgtctagtgggaaaggagggaaacaaagaattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55902372 766 + 60714840 ATAAtgtaaccaactc--gtttctgctattcagaggc------agaagaagttgggggtggtgaaagtaaagcagctttattgatcaaatgctcgcagatgagaaatggccaagctgatgtctttcaaagaccatttcaaactttaggctggggagaggggcttaaaaaggggaattttgaatgggaggcatacaggagtggtgctgggtacaaggtatgtgtgtcttgctccaaaggctgtcttgagtcacgggccacccagagcatgggctggtgtcatgtcaacaatggccaggttgtagattgatcgtcttgaagtaacctctggagttttgcagctgtgtttccatacctagtttgtttcaagattagcccctgcggcgaggcgcggtggctcacgcctgtaatcccaacggtttgggaggccaaggtgggtcgctcacttgaggtcaagagttcaagaccagcctggcttacatggtgaaaccttgattctac----aaaaaaaaaaaa----------aatgcaaaaaattagctgggcatggtggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaattgctcgaacccaggaggtggaggttgc-agtgagccaagactgtgccactacactccaacctgggtgtcagagccagactccatctttaaaa-aacaaat-----aagattagcccctggaacttctaagtaagcacatagataagccagcagtgcaagacagtgtctagtgggaaaggagggaaacaaagaattt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102665938 784 - 106955855 ATAAtgtaaccaactcaagtttctgctactcagaggc------agaagaagtgggaggtggtgaaagtaaagaagctttattgatcaaatgctcgcagttgagaaatggccaagctaatgtctttaaaagaccatttcaaactttaggctggggagaggggcttaaaaaagggaactttgaatgggaggcctacaggagtggtgctgggtatgaggtatgtgtctcttgctccgaaggctgtcttgagccatgggccacctggagcatgggctggtgtcatgtcaacaatggccaggttgtagattgatcgccttgaggtaatctctggagttttgcagctgggtttccatacctagtttgtttcaagattagcccccgcggcgaggcgctgtggttcatgcctgtaatcccaacagtttgggaggccaaggtgggtcgctcacttgaggtcaagagttcaagaccagcctggcttacatggtgaaaccttgactctac----aaaaaaaaaaaaaaaaaaaagaaatgcaaaaaattagctgggcatggtggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcaagtgagccaagactgtgccactgcactccaacctgggtgtcagagccagactcaatctttaaaa-aataaataaataaagattagcccctggaacttctaagtaagcacatagagaagccagcagcgcaagacagtgtctagtgggaaaggagggaaacaaagaattt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59950613 762 + 64156825 ATAAtgtaaccaactcaagtttctgctactcagaggctagaataggagaagtgaggggtggtgaaagtaa---agctttattaatcaaatggtcgcagatgagaaatggccaagctaatgtctttaaaagaccgtttcaaactgtaggctggggagaggggcttaaaaaggggaactctgaatcggaggcatacaggaatggtgctgggtacagggtatgtgtgtctttctctgaaggctgtcttgagtcatgggccacctggagcatgggctggaatcatgtcaataatggccaggttttagattgatcgccttgaggtaatctctggagttttgcagctgggtttccatacgtagtttgtttcgtgattagcccctgcggccaggcgcggtggctcacgcctgtaatcccaatggtttgggaggccaaggtgggtccctcacttgaggtcaagagttcaagaccagcctggcttacatggtgaaactttgactctac----------aaaaaa---------------aaaaaaatagctgggcgtggtggcaggtgcctgtaatcccagctacccaggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgt-agtgagccaagattgtgccactgtgctccaacttgggtgacagagccagactccatctttaaaa----aaataaataaagattagcccctggaacttctaagtaagcacatggataagccatcactgcaagacagtgtctagtgggaaaggcaggaaacaaagaattt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54954555 762 + 59248254 ATAAtgtaaccaactcaagtttctgctactcagaggctagaataggagaagtgaggggtggtgaaagtaa---agctttattaatcaaatggtcgcaaatgagaaatggccaagctaatgtctttaaaagaccgtttcaaactgtaggctggggagaggggcttaaaaaggggaactctgaatcggaggcatacaggaatggtgctgggtacagggtatgtgtgtctttctctgaaggctgtcttgagtcatgggccacctggagcatgggctggaatcatgtcaataatggccaggttttagattgatcgccttgaggtaatctctggagttttgcagctgggtttccatacgtagtttgtttcgtgattagcccctgcggccaggcgcggtggctcacgcctgtaatcccaatggtttgggaggccaaggtgggtccctcacttgaggtcaagagttcaagaccagcctggcttacatggtgaaactttgactctac----------aaaaaa---------------aaaaaaatagctgggcgtggtggcaggtgcctgtaatcccagctacccaggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgt-agtgagccaagattgtgccactgtgctccaacttgggtgacagagccagactccatctttaaaa----aaataaataaagattagcccctggaacttctaagtaagcacatggataagccatcactgcaagacagtgtctagtgggaaaggcgggaaacaaagaattt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47084527 760 + 51301725 ATAATGTAACCAACTCAAGTTTCTGCTACTCAGAGGCTAGAATAGGAGAAGTGAGGGATGGTGAAAGTAA---AGCTTTATTGATCAAATGGTCACAGATGAGAAATGGCCAAGCTAATGTATTTAAAAGACCGTTTCAAACTGTAGGCCGGGGAGAGGGGCTTAAAAGGGGGAACTCTGAATCGGAGGCATACAGGAATGGTGCTGGGTACAGGGTATGTGTGTCTTTCTCTGAAGGCTGTCTTGAGACA---GCCACCTGGAGCATGGGCTGGAATCATGTCAGTAATGACCAGGTTTTAGATTGATCACCTTGAGGTAATCTCTGGAGTTTTGCAGCTGGGTTTCCATACCTAGTTTGTTTCGAGATTAGCCCctgcggccaggcgcagtggctcacgcctgtaatcccaatggtttgggaggccaaggtgggtccctcacttgaggtcaagagttcaagaccagcctggcttacatggtgaaactttgactttac---------aaaaaaa---------------aaaaaaatagctgggcgtagtggcaggtgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgt-attgagccaagattgtgccactgtgctccaacttgggtgacagagccagactccatctttaaaa----aaataaacaaagattagCCCCTGGAACTTCTAAGTAAGCACATGGATAAGCCATCAGTGCAAGACAGTGTCTAGTGGGAAAGGCGGGAAACAAAGAATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46792366 776 + 50890351 ATAAtgtaaccaactcaagtttctgctactcagaggctagaataggagaagtgaggggtggtgaaagtaa---agctttattgatcaaatggtcgcagatgagaaatggccaagctaatgtctttaaaagaccatttcaaactgtaggctggggagaggggcttaaaaaggggaactttgaatcggaggcatacaggaatggtgctgggtacagggtatgtgtgtcttgctctgaaggctgtcttgagtcatgggccacctggagcatgggctggaatcatgtcaataatagccaggttttagattgatcgccttgaggtaatctctggagttttgcagctgggtttccatacccagtttgtttcgagattagcccctgcggccaggcgcggtagctcacgcctgtaatcccaatggtttgggaggccaaggtgggtccctcacttgaggtcaggagttcaagaccaccctggcttacatggtgaaactttgactctacaaaaaaaaaaaaaaaa---------------aaaaaaatagctgggtgtggtggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgt-agtgagccaagattgtgccactgtgctccaacttgggtgacagagccagactccatctttaaaaaaataaataaataaagattagcccctggaacttctaagtaagcacatggataagccatcactgcaagacagtgtctagtgggaaaggcgggaaacaaagaattt i chlSab2.chr6 I 313 C 0 e mm10.chr7 3630114 232 + 145441459 I e canFam3.chr1 19588306 1428 - 122678785 I e calJac3.chr22 45363083 3219 + 49145316 I a score=279425.000000 s hg38.chr19_GL949747v2_alt 92452 95 + 729520 caaagtatgttttcaaggctaaaggcaagaaagg--aataagaaagtttgcaaatgcatttggaatctacaccacttggttccaGTAAGTCTTAGCA s panTro4.chr19 59026019 95 + 63644993 caaagtatgttttcaaggctaaaggcaagaaagg--aataagaaagtttgcaaatgcatttggaatctacaccacttggttccaGTAAGTCTTAGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55903138 94 + 60714840 caaagtatgttttcaaggctaaaggaaagaaagg---ataagaaagtttgcaaatgcatttggaatctacaccacttggttccaGTAAGTCTTAGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102666722 95 - 106955855 ctaagtgtgttttgaaggctaaaggaaagaaagg--aataagaaagtttgcaaatgcatttggaatctatgccacttggttccaGTAAGTCTTAGCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59951375 95 + 64156825 cagagtatgttttcaaggctaaaggcaagaaagg--aaaaaaaaagtttgcaaatgcatttggaatctacaccacttggttCCGGTAAGTCTTAGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54955317 95 + 59248254 cagagtatgttttcaaggctaaaggcaagaaagg--aaaaaaaaagtttgcaaatgcatttggaatctacaccacttggttCCGGTAAGTCTTAGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47085287 95 + 51301725 CAGAGTATGTTTTCAAGGCtaaaggcaagaaagg--aaaaaaaaagtttgcaaatgCATTTGGAATCTACACCACTTGGTTCCGGTAAGTCTTAGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46793142 95 + 50890351 caaagtatgttttcaaggctaaaggcaagaaagg--aaataaaaagtttgcaaatgcatttggaatctacaccacttggttCCGGTAAGTCTTAGCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45366302 97 + 49145316 caaagtatgttttcaaggctaaaagcaagaaaggaaaaaaaaaaagtttcaaaatgcatttggaatctaagccacttgatgacaGGAAGTCTTAGCA i calJac3.chr22 I 3219 C 0 e mm10.chr7 3630114 232 + 145441459 I e canFam3.chr1 19588306 1428 - 122678785 I a score=144139.000000 s hg38.chr19_GL949747v2_alt 92547 54 + 729520 AGGTGGCGGTCATAGGGgtgtgctgcgtcttgcacaggtcggagctggagac-tc s panTro4.chr19 59026114 54 + 63644993 AGGTGGCGGTCATAGGGgtgtgctgcgtcttgcacaggtcggagctggagac-tc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55903232 54 + 60714840 AGGTGGCGGTCATAGGGgtgtgctgcgtcttgcacatgtcagagctggagac-tc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102666817 54 - 106955855 AGGTGGTGGTCATAGGGgtgtgctgtgtcttgcacaggtcggagctggagac-tc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59951470 54 + 64156825 AGGTGGCGGTCGTAGGGGTGTGCtgtgtcttacacaggtcggagctggagac-tc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54955412 54 + 59248254 AGGTGGCGGTCGTAGGGGTGTGCtgtgtcttacacaggtcggagctggagac-tc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47085382 54 + 51301725 AGGTGGCGGTCGTAGGGGTGTGCTGTGTCTTGCACAGGTCGGAGCTGGAGAC-TC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46793237 54 + 50890351 AGGTGGCGGTCGTAGGGgtgtgctgtgtcttacacaggtcacagctggagac-tc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45366399 20 + 49145316 GGGTGGAGGTCGCAGGGATA----------------------------------- i calJac3.chr22 C 0 C 0 s mm10.chr7 3630346 55 + 145441459 AGGTGGTACCTGGAGGGATGTGCTGTGTTCTGTGTGGGTAGGAACAGGAGACAAC i mm10.chr7 I 232 C 0 e canFam3.chr1 19588306 1428 - 122678785 I a score=68613.000000 s hg38.chr19_GL949747v2_alt 92601 23 + 729520 gccagtgaacaaaacaaactaaa s panTro4.chr19 59026168 23 + 63644993 gccagtgaacaaaagaaactaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55903286 23 + 60714840 gccagtgaacaaaacaaactaaa i ponAbe2.chr19 C 0 I 724 s nomLeu3.chr10 102666871 23 - 106955855 gccagtgaacaaaacaaactaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59951524 23 + 64156825 gccagtgaacaaaacaaactaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54955466 23 + 59248254 gccagtgaacaaaacaaactaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47085436 23 + 51301725 gccagtgaacaaaacaaactaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46793291 23 + 50890351 gccagtgaacaaaacaaactaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45366419 4 + 49145316 -------------------TAAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3630401 20 + 145441459 CTCCGTGAACTAAGCAAGCT--- i mm10.chr7 C 0 C 0 s canFam3.chr1 19589734 23 - 122678785 gccaaagaacaaagcaaaagaaa i canFam3.chr1 I 1428 C 0 a score=946469.000000 s hg38.chr19_GL949747v2_alt 92624 247 + 729520 gcacctgttgtcgtggagcctgcat---gctagtggggttgataaa-GAAGGACC---AGGGTCTTCTGGGGGAGAATCATCGCTCAGTAATAAGGAGGGACTTTGTCGGGGCAAGTTTTTAGGGAACGCTGCTGTCCCTCCC---CAGGCCTCGGGATGTCTCTGGCAGATGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaagaagaggagccagcgatcgagg s panTro4.chr19 59026191 247 + 63644993 gcacctgtcgtcgtggagcctgcat---gctagtggggttgataaa-GAAGGACC---AGGGTCTTCTGGGAGAGAATCATCGCTCAGTAATAAGGAGGGAGTTTGTCGGGGCAAGTTTTTAGGGAACCCTGCTGTCCCTCCC---CAGGCCTCGGGATGTCTCTGGCAGATGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaagaagaggagccagcgatcgagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55904033 247 + 60714840 gcacctgtcgtcatggagcctgcat---gctagtggggttgagaaa-gaAGGACC---AGGGTCTTCTGGGGGAGAATCATCGCTCAGTAATAAGGAGGGACTTTATTGGGGCAAGTTTTTAGGGAACCCTGCTGTCCCTCCC---CAGGCCTCGGGATGTCTCTGGCAGATGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaggaagaggagccagcgatcgagg i ponAbe2.chr19 I 724 C 0 s nomLeu3.chr10 102666894 247 - 106955855 gcacctgtcgtcgtggagcctgtgt---gcgggtggggttgataaa-GAAGGACC---AGGGTCTTCCGGGGGAGAATCATCGCTCAGTAATAAAGAGGGACTTTGTCGGGGCAAGTTTTTAGAGAACCCTGCTCTCCCTCCC---CAGGCCTCGGGATGTCTCTGGCAGATGAGCTCTTAGCTGATCTCGAAGAGGCAGCAGAAGAGGAGGAAGGAGGAAGCTATGGGGAGGAAGAAGAGGAGCCAGCGATCGAGG i nomLeu3.chr10 C 0 M 1722 s rheMac3.chr19 59951547 248 + 64156825 gcacctgtcgtcgtggagcctgcac---gctactggggTTCATAAA-GAAGGACC---AGGGTTTTCTGGGGGAGAATCATCAC-CAGTAATAAGGAGGGACTTTGTCAGGGCAAGTTTTTAGGGAACCCTGCTCTCCCTCCC-CACAGGCCTCGGGATGTCTCTGGCAGACGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaagaggaggagCCAGCCATCGAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54955489 248 + 59248254 gcacctgtcgtcgtggagcctgcac---gctactggggTTCATAAA-GAAGGACC---AGGGTTTTCTGGGGGAGAATCATCGC-CAGTAATAAGGAGGGACTTGGTCAGGGCAAGTTTTTAGGGAACCCTGCTCTCCCTCCC-CACAGGCCTCGGGATGTCCCTGGCAGACGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaagaggaggagccagccatcgagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47085459 248 + 51301725 gcaCCTGTCGTCGTGGAGCCTGCAC---GCTACTGGGGTTCATAAA-GAAGGACC---AGGGTTTTCTGGGGGAGAATCATCGC-CAGTAATAAGGAGGGACTTTGTCGGGGCAAGTTTTTAGGGAaccctgctctccctccc-cacaggcCTCAGGATGTCTCTGGCAGATGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaagaggaggagccagccatcgagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46793314 248 + 50890351 gcacctgtcgtcgtggagcctgcac---gctactggggTTCATAAA-GAAGGACC---AGGGTTTTCTGGGGGAGAATCATCGC-CAGTAATAAGGAGGGACTTTGTCGGGGCAAGTTGTTAGGGAACCCTGCTCTCCCTCCC-CACAGGCCTCGGGATGTCTCTGGCAGATGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaagaggaggagccagccatcgagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45366423 245 + 49145316 GCCGCTGTCAGTGTGGAGCCTGTGT---GCTGGTGGGATTGGGAAA-GAAGG-CC---AGGGCCTTCTGGGGGAGAAT--TTCCTCAGTGATAAGGAGGGACTT-GTTGGGGCAAGTGTTTAGGGAACCCTACTCTCCCTCTC-CACAGGCCTCGGGATGTCTCTAGCAGATGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaggaagaggagccagcgatcgagg i calJac3.chr22 C 0 C 0 s mm10.chr7 3630421 244 + 145441459 ------------GTGGAGCCTGCGTGCGGCTACAGGAGCTGATGAA-GAAGAAACTTAAGGGGATCCGGGAGAAGGTGCTCCTTCTGGTGATATGAGTGGACAGGGTCAAGATGCAGTATTAGGGAACCCCATTCTCCCTTTCCCATAGGCCTTGGGATGTCTCTGGCTGATGAGCTCTTGGCTGACCTCGAGGAGGCAGCAGAAGAAGAGGAAGGAGGAAGCTATGGAGAAGAGGAGGAGGAGCCAGCAATTGAGG i mm10.chr7 C 0 C 0 s canFam3.chr1 19589757 212 - 122678785 atacccgtgcttatggagcctgcat---gcttgtggggCTGACCCGTGAAGGACC---AGGCC------------AAGCCCCTCTCGTTAATGAG--------------------------AGGGGATGCTGCTTTCCCTTCC-CATAGGCCTCGGCATGTCTCTGGCAGATGAGCTTCTGGCCGACCTTgaggaggcggcagaggaggaagaaggaggaagctatggggaggaagaagaggagccagcaatcgagg i canFam3.chr1 C 0 C 0 a score=1265126.000000 s hg38.chr19_GL949747v2_alt 92871 429 + 729520 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCAGTCAAGACCATCGCCAAGCTATGGGATAGTAAGATGGTAAGAGGACAAGAGGTGTTCCTAG-CAGGGGGCTCTAGACAGAATCTCCCAGAAGGGGGTGATACAGG--------CTTCTTTTTGAAGAGTGCTGGATTCTGACTGTCTTCTCCTTTCCTA-CAGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTCTGTGCCCCTCCCCATCTCCTGTCTCTCCTGCCAGGCCCCCTGGCTCCCTGGCTGCTTGTGGC---------TGGGT------ATATCTCCTT-CTCAGCCTTTTCCAGAGCCTTCTTTTTT-------TTTT--GTTTCACCCCAACCCGTTCCCTTTTCCACTAAATATATATTGCATTGTA s panTro4.chr19 59026438 430 + 63644993 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCAGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGTGTTCCTAG-CAGGGGGCTCTAGACAGAATCTCCCAGAAGCGGGTGATACAGG--------CTTCTTTTTGAAGAGTGCTGGATTCTGACTGTCCTCTCCTTTCCTA-CAGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTCTGTGCCCCTCCCCATCTCCTGTCTCTCCTGCCGGGCCCCCTGGCTCCCTGGCTGCTTGTGGC---------TGGGT------ATATCTCCCT--TCAGCCTTTACCAGAGCCTTCTTTTTT-------TTTTTTGTTTCACCCCAACCCGTTCCCTTTTCCACTAAATATATATTGCATTGTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55904280 430 + 60714840 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCGGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGCATTCCTAG-CAGGGGGCTTTAGACAGAATCTCCCAGAAGGGGGTGATACAGG--------CTTCTTTTTGAAGAGTGCTGGATTCTGACTCTCCTCTCCTTTTCTG-CAGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTGTGTACCCCTCCCCATCTCCTGTCTCTCCTGCCAGGCCCCCTGGCTCCCTGGCTGCTTGTGGC---------TGGGT------ATATCTCCCT-CTCAGCCTTTTCTAGAGCCTTCTTTTTT-------TTGT-TGTTTCTCCCCAACCCGTTCCCTTTTCCACTAAATATATATTGCATTGTA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59951795 438 + 64156825 ATGTGCAGGAGGAGACACAGCTGGATCTTTCCGGGGATTCGGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGCGTTCCTAGCCAGGGGGCTCTAGACAGAATCTCCCAGAAGGGGGTGACACAGG--------CTTCTTTTGGAAGAGTCCTGGATTCTGACTCTCCCCTCCTTTCCTG-CAGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTCTGTGCCCTTCCCTATCTGCTATGTCTCCTGCCAGGCCCCTAGGCTCCCTGGCTGCTTGCGGC---------TGGGT------GTATCTCCCC-CGCAGCCTTTTCCAGAGCCTTCTTTCTT-GTTTGTTTGTTTGTTTCTCCCCAACCCCTTCCCTTTTCCACTAAACATATACTGCATTGCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54955737 438 + 59248254 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCGGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGCGTTCCTAGCCAGGGGGCTCTAGACAGAATCTCCCAGAAGGGGGTGACACAGG--------CTTCTTTTGGAAGAGTCCTGGATTCTGACTCTCCCCTCCTTTCCTG-CAGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTCTGTGCCCTTCCCTATCTGCTGTGTCTCCTGCCAGGCCCCTAGGCTCCCTGGCTGCTTGCGGC---------TGGGT------GTATCTCCCC-CGCAGCCTTTTCCAGAGCCTTCTTTCTT-GTTTGTTTGTTTGTTTCTCCCCAACCCCTTCCCTTTTCCACTAAACATATACTGCATTGCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47085707 436 + 51301725 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCGGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGCGTTCCTAGCCAGGGGGCTCTAGACAGAATCTCCCAGAAGGGGGTGACACA-G--------CTTCTTTTGGAAGAGTCCTGGATTCtgactctcctctcctttcctg-caGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTCTCTGCCCTTCCCCATCTCCTATGTCTCCTGCCAGGCCCCTAGGCTCCCTGGCTGCTTGTGGC---------TGGGT------ATATCTCCCC-CTCAGCCTTTTCCagagccttctttttt--tttttttttttgtttctccccAACCCTTTCCCTTTTCCACTAAACATATACTGCATTGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46793562 438 + 50890351 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCGGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGCGTTCCTAG-CAGGGGGCTCTAGACAGAATCTCCCAGAAGGGGGTGACACAGG--------CTTCTTTTGGAAGAGTCCTGGATTCTGACTCTCCTCCCCTTTCCTG-CAGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTCTCTGCCCTTCCCCATCTCCTATGTCTCCTGCCAGGCCCCTAGACTCCCTGGCTGCTTGTGGC---------TGGGT------ATATCTCCCC-TGCAGCCTTTTCCAGAGCCttctttttttttttttttttttgtttCTCCCCAACCCCTTCCCTTTTCCACTAAACATATACTGCATTGCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45366668 426 + 49145316 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCGGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGCATGGATAG-CAGGGGGCTCTAAAC--AATCTCCCAGAAAGAGGCGATACAGG--------CTTCTTTTTGAAGAGTCCTGGATTCCGACTCTC--CTCCTTCCCTG-CAGTTTGCTGAGATCATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCCGAAGGTACTTCCTCCCCCTTCGTGCCCCTCCCCATCTCCTGACTCTTCTGCCAGGCCCCTTGGCTCCTTTGCTGCTTGTGGC---------TGGGT------ATATCTCCCT-CTCAGAGTTTTCCAGAGCCTTCTCTTTT--------TTTTTATTCCTCCCCAACCCATTCCCTTTTCCAGTAAACATAAATTGCTTCGTA i calJac3.chr22 C 0 C 0 s mm10.chr7 3630665 405 + 145441459 ATGTACAGGAGGAGACCCAGCTGGATCTTTCTGGAGATTCAGTCAAGAGCATTGCCAAGCTATGGGACAGCAAGATGGTGAGGTGGCA-----CCCTTTAAG-TCAGCGTTCCTAGGGAGGAGTGGCCGGAGAGCAG------------------TTCTTTCTG-AGAGGCCTAGTTTCTGACTGTGCTCTCCTTCCTCATCAGTTTGCTGAGATCATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAACGTGTCGGAAGGTGCCTCCCACCCTCACTTTCCTCTGCCCAT---------------TCTGACTCCCCGACTCTCTTGCTCCTTATGGT---------TTTATCACCAAGTGTCTCCCTCCTCAGCTTTCCTCAGAGCATTCATTCTT-------CTTTTTTTTTTT---AAATCCAGTTACTGACCCTCTGAAAACATACTGCATTGTA i mm10.chr7 C 0 I 1141 s canFam3.chr1 19589969 417 - 122678785 atgtgcaggaggagACGCAGCTGGATCTTTCTGGGGATTCAGTCAAGAGTATCGCCAAGCTGTGGGACAGCAAGATGGT------------------------GAGTGGGCTGTAGAGAGAAGCTGCCGGGAGG-GCTGATGTGTGCAGTTGCTCTTCTTTCTG-AGAGTCCTGAGTTCTGTCTCTCTGTCCTCCCTGAA-CAGTTTGCTGAGATCATGATGAAGATTGAGGAGTATATCAGCAAGCAGGCCAAGGCCTCGGAAGGTACCTCTCCCCTCCTGCTCCCTCTCACCCACCCAGCTGTGTCCACCCAG-CCCCTGGGCTCCTTTGCTGCGTACAGCTTTGAAAGTTTGGT------CTGCCTGCCT-CTCAGCCTTTTTGAGAGCCCTCTTTTTC------------TTTTCCATCCCAACCCAGTCTCTTCTCCCCTGAGAACACATCACATCATA i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102667141 1722 - 106955855 M a score=627517.000000 s hg38.chr19_GL949747v2_alt 93300 260 + 729520 AAGCTCATGCTTCTTAAGTCCTTCCTGTG-----TGCTGAGC--TTACTGATCATGATAGGACTCAGCTTGAGgtttcccagacttcactgattcacatgaccggttacagggtttttgccacatctataagccgcttatcctattatttgcttaacatattctttgagtcta-ggactttttttcttaaattt-atctgagaaggaagcaaattgctaccatgaatggaaaactggtatcatttggcaaagacaaagtcactgtataa s panTro4.chr19 59026868 257 + 63644993 AAGCTCATGCTTCTTAAGTCCTTCCTGTT-----TGCTGAGC--TTACTGATCATGATAGGACTCAGCTTGAGgtttcccagacttcactgattgacatgaccggttacagggtttttgccacatctgtaagccgcttatcctatt---tgcttaacatattctttgagtcta-ggactttttttcttaaattt-atctgagaaggaagcaaattgctaccatgaatggaaaactggtatcatttggcaaagacaaagtcactgtataa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55904710 260 + 60714840 AAGCTCATGCTTCTTAAGTCCTTCCTGTG-----TGCTGAGC--TTACTGATCATGATAGGACGCAGCTTGAGgtttcccagacttcactgattcacatgaccggttacagggttttcgccacatctataagccacttatcctattatttgcttaacatattctttgagtcta-ggactttttttcttaaattt-atccgagaaggaagcaaattgctaccatgaatggaaaactggtatcatttggcaaagacaaagtcactgtataa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59952233 256 + 64156825 AAGCTCATGCTTCTTACGTCCTTTCTGTG-----TGCTGAGC-----CTGGTCATGTTGGGACTTAGCTTGAGGGttcccagacttcactgatgcacatgaccagttacagggtttttgccacatctataagccacttgtcctattatttgcttaacatattctttgagtctg-ggactttttctcttaaattt-atctaagaaggaagcaaattgctaccatgaatggaaaactggtatcattt-gcaaagacaaagtcaccgtataa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54956175 256 + 59248254 AAGCTCATGCTTCTTACGTCCTTTCTGTG-----TGCTGAGC-----CTGGTCATGCTGGGACTTAGCTTGAGGGttcccagacttcactgattcacatgaccagttacagggtttttgccacatctataagccacttgtcctattatttgcttaacatattctttgagtctg-ggactttttctcttaaattt-atctaagaaggaagcaaattgctaccatgaatggaaaactggtatcattt-gcaaagacaaagtcaccgtataa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47086143 256 + 51301725 AAGCTCATGCTTCTTACGTCCTTTCTGTA-----TGCTGAGC-----CTGGTCATGCTGGGACTTAGCTTGAGGGTTCCCAGACTTCACTGATTCACATGACCGGTTACAGGGTTTTTGCCACATCTATAAGCCACTTGTCCTATTATTTGCTTAACATATTCTTTGAGTCTG-Ggactttttctcttaaattt-atcTAAGAAGGAAGCAAATTGCTACCATGAATGGAAAACTGGTATCATTT-GCAAAGACAAAGTCACcgtataa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46794000 261 + 50890351 AAGCTCATGCTTCTTACATCCTTCTTACGTCCCATGCTGAGC-----CTGGTCATACTGGGACTTAGCTTGAGGGttcccagacttcactgattcacatgaccagttacagggtttttgccacatctataagccacttgtcctattatttgcttaacatattctttgagtctg-ggactttttctcttaaattt-atctaagaaggaaggaaattgctaccatgaatggaaaactggtatcattt-gcaaagacaaagtcaccgtataa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45367094 257 + 49145316 CAGCGCAT-CTTCTTAAGTCCTCACTGTG-----TCCTGAGT--TTGCTAATCACGATGGGACTTAGCTTGAGTtttcccagactcc-cagattcacatgaccagttacagggttttggccacatctagaagccacttgtcct-ttaattgcttaacatattctttgagtcta-ggtcttttt-tcttaaatttgatctacaaaggaagcaaactgctgccatgaatgggaaactggcatcacttggtaaagacgaagtcaccatgtga i calJac3.chr22 C 0 C 0 s canFam3.chr1 19590386 252 - 122678785 AAGCTGATGTTCCTTAAGTCCTTGCTCCG-----TGCTGAGCACTTACTAACTGCAGTAGGACTTGCCTCAAGATTCCTCCGGCTTC--------ATGTGACTGCTT--GAGGGtcttgccacatctgtgaa-cacttgttttgttttttacttaatttttttttcaaatcagtgtactcttttctttgaattt-acctaaaaaggaaagttattgctactgcgagtagaaaactggtatcacttggtaagtagagagtaattctaaaa i canFam3.chr1 C 0 I 87 e mm10.chr7 3631070 1141 + 145441459 I e nomLeu3.chr10 102667141 1722 - 106955855 M a score=35082.000000 s hg38.chr19_GL949747v2_alt 93560 19 + 729520 aaatagatataTAATTATT s panTro4.chr19 59027125 19 + 63644993 aaatagatataTAATTATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55904970 19 + 60714840 aaatagatataTAATTATT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59952489 19 + 64156825 aaatagacataTAATTATT i rheMac3.chr19 C 0 I 8 s macFas5.chr19 54956431 19 + 59248254 aaatagatataTAATTATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47086399 13 + 51301725 aaatagatatatt------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46794261 19 + 50890351 aaatagatataTAATTATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45367351 19 + 49145316 aaataaatacGTGATTATT i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19590638 87 - 122678785 I e nomLeu3.chr10 102667141 1722 - 106955855 M a score=4103.000000 s hg38.chr19_GL949747v2_alt 93579 8 + 729520 TAGGAACC s panTro4.chr19 59027144 8 + 63644993 AAAGAACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55904989 8 + 60714840 AAAGAACC i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 46794280 8 + 50890351 AAAGAATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45367370 8 + 49145316 AGAGCATC i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19590638 87 - 122678785 I e nomLeu3.chr10 102667141 1722 - 106955855 M e papAnu2.chr19 47086412 0 + 51301725 C e macFas5.chr19 54956450 0 + 59248254 C e rheMac3.chr19 59952508 8 + 64156825 I a score=76938.000000 s hg38.chr19_GL949747v2_alt 93587 295 + 729520 ACCTAAggccgggcgccgtggctcacgcctgtaatcccagcactttgggaggcggaggcaggtggatcatgagttcaggagatcgagaccatcctggctaacacggtgacaccccgtctctactaaaaatacaaaaaattagccaggcgtggtggcggg-----tgcctgtagtcccagctactcaggaggctgaggcgggagaatggcgtgaacctgggaggcggagcttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagcaagactccgtctcaaaaaaaa s panTro4.chr19 59027152 295 + 63644993 ACCTAAggctgggcgcagtagctcacccctgtaatcccagcactttgggaggccgaggcaggtggatcacgaggtcaggagatcaagaccatcctggctaacacggtgacaccccgtctctactaaaaatacaaaaaattagccgggcgtggtggcggg-----tgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacctgggaggcggagcttgcagtgagccaagatcgtgccactgcactccagcctgggcgacagagcaagactccgtctcaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55904997 300 + 60714840 ACCTAAggccgggtgcagtagctcaggcctgtaatcccagcactttgggaggctgaggcaggtggatcacgaggtcaggagatcaagaccatcctggctaacacggtgaagccccgtctctactaaaaatacaaaaaattagccgggcgtggtggcgggtgccttgcctgtagtcccagctattcaggagggtgaggcaggagaatggcgtgaacctgggaggcagagcttgcagtgagccgagatcgtgccactgcactcctgcctgggagacagagcaagattccgtctcaaaaaaaa i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19590638 87 - 122678785 I e calJac3.chr22 45367378 0 + 49145316 C e nomLeu3.chr10 102667141 1722 - 106955855 M e chlSab2.chr6 46794288 0 + 50890351 C e papAnu2.chr19 47086412 0 + 51301725 C e macFas5.chr19 54956450 0 + 59248254 C e rheMac3.chr19 59952508 8 + 64156825 I a score=2554.000000 s hg38.chr19_GL949747v2_alt 93882 8 + 729520 aaaa----------aata s panTro4.chr19 59027447 8 + 63644993 aaaa----------aata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55905297 18 + 60714840 aaaaaaaaaaaaagaaTC i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54956450 8 + 59248254 AAAG----------AATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47086412 8 + 51301725 aaag----------AATC i papAnu2.chr19 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19590638 87 - 122678785 I e calJac3.chr22 45367378 0 + 49145316 C e nomLeu3.chr10 102667141 1722 - 106955855 M e chlSab2.chr6 46794288 0 + 50890351 C e rheMac3.chr19 59952508 8 + 64156825 I a score=333780.000000 s hg38.chr19_GL949747v2_alt 93890 152 + 729520 aCCTAAAACCTTTTCTCATGCCCAAATTGAGAGAACACTAGCTTATCTCATGAGTGCTCAGACTCACTCTTAAGAGGGCAGTCCTGTTACCATTCCTAttct-ttttttt------ttttccttgagatagagtctccctctgtcgcccaggctggagt s panTro4.chr19 59027455 152 + 63644993 aCCTAAAACCTTTTCTCATGCCCAAATTGAGAGAACACTAGCTTATCTCATGAGTGCTCACACTCACTCTTAAGAGGGCAGTCCTGTTACCATTCCTAttct-ttttttt------ttttccttgagatggagtctccctctgtcacccaggctggagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55905315 153 + 60714840 ACCTAAAACCTTTTCTCATGCCCAAATTGAGAGAACACTAGCTTATCTCATGAGTGCTCAGATTCACTCTTAAGAGGGCAGTCCTGTTACCATTCCTAttctattttttt------ttttccttgagatggagtctccctctgtcacccaggctggagt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59952516 157 + 64156825 ACCTAAAACCTTTTCTTACTTCCAAATTGAGAGAATACTAGCTTATCTCGTGAGTGCTCAGACTCACTCTTAGGAGGGCAGTCCTGTTACCATTCCTAttc--ttttttttttccattttccttgagacggagtctccctctgttgcccaggctggagt i rheMac3.chr19 I 8 C 0 s macFas5.chr19 54956458 158 + 59248254 ACCTAAAACCTTTTCTTACTTCCAAATTGAGAGAATACTAGCTTATCTCGTGAGTGCTCAGACTCACTCTTAGGAGGGCAGTCCTGTTACCATTCCTAttct-ttttttttttccgttttccttgagacggagtctccctctgttgcccaggctggagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47086420 158 + 51301725 ACCTAAAACCTTTTCTCACTTCCAAATTGAGAGAATACTAGCTTATCTCGTGAGTGCTCAGACTCACTCTTAGGAGGGCAGTCCTGTTACcattcctattct-ttttttttttccgttttccttgagacggagtctccctctgttgcccaggctggagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46794288 158 + 50890351 ACCTAAAACCTTTTCTCACTTCCAAATTGAGAGAATACTAGCTTATCTCCTGAGTGCTCAGACTCACTCTTAGGAGGGCAGTCCTGTTACCATTCCTAttct-ttttttttttccgttttccttgagacggagtctccctctgttgcccaggctggagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45367378 156 + 49145316 ATCTAAAAGCTTTTCTCACTTCCACATTTCGGGAACACTGGCTTATCTCTTGAGTAGTCAGACT--GTCTTA-GAGGGCAGTTCTGTTACCACTCCCAttctctctcttttttattttttcctttcgacagagtctcactctctcgcccaggctggagt i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19590638 87 - 122678785 I e nomLeu3.chr10 102667141 1722 - 106955855 M a score=734064.000000 s hg38.chr19_GL949747v2_alt 94042 248 + 729520 gcagtgatgtgttcttggctcattgcaacctccacctcccgggttcaagcgattctcctccctcagccttatgtatagctgggattacaggtatgcaacaccatgcctggctattttgta--ttttttagtagagatggg--gtttcaccatgttgaccaggctagtctcgaactcctgacctcaagtaatccgcccacctcggcctcccaaagtgctgggattacaggcatgagccactacgcccagccTT s panTro4.chr19 59027607 248 + 63644993 gcagtgatgtgatcttggctcattgcaacctccacctcccgggttcaagcgattctcctccctcagccttatgtatagctgggattacaggtatgcaacaccatgcctggctattttgta--ttttttagtagagatagg--gttttaccatgttgaccaggctagtctcgaactcctgacttcaagtaatccgcccacctcggcctcccaaagtgctgggattacaggcatgagccactacgcccagccTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55905468 248 + 60714840 gcagtgatgtgatcttggctcattgcaacctctgcctcctgggttcaagcgattctcctccctcatccttatgtgtagctgggattacagttgtgcaacaccatgcctagctattttgta--ttttttagtagagacggg--gtttcaccatgttgaccaggctagtctcgaactcctgacctcaagtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccactgtgcccggccTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102668863 247 - 106955855 gcagtgatatgatcttgg-tcattgcaacctctgcctcccgggttcaagcgattctcctccctcagcgttatgtgtagctgggattacaggtatgcaacaccatgcctggctattttgta--ttttttagtagagacggg--gtttcaccatgttgaccaggctagtctcgaactcctgacctcaagtaatctgcccacctcggcctcccaaagtgctgggattacaggcatgagccactacgcccagccTT i nomLeu3.chr10 M 1722 C 0 s rheMac3.chr19 59952673 248 + 64156825 gcagtgatgtgatcttggctcactgcaacctctgcctcccgggttcaagtgagtctcctccctcagccacctgagtagctgagatgacaggtgtgcaccaccacgcctggctattttgta--ttttttagtagagacggg--gtttcatcatgttggccaggctggtctcgaactcctgacctcaagtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccaccgtgcccggccTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54956616 248 + 59248254 gcagtgatgtgatcttggctcactgcaacctctgcctcccgggttcaagtgagtctcctccctcagccacctgagtagctgagatgacaggtgtgcaccaccacgcctggctattttgta--ttttttagtagagacggg--gtttcatcatgttggccaggctgctctcgaactcctgacctcaagtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccaccgtgcccggccTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47086578 248 + 51301725 gcagtgatgtgatcttggctcactgcaacctctacctcccgggttcaagtgattctcctccctcagccacctgagtagctgagatgacaggtgtgcaccaccacgcctggctattttgta--ttttttagtagagacggg--gtttcatcatgttggccaggctggtctcgaactcctgacctcaagtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccaccatgcccagcctt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46794446 248 + 50890351 gcagtgatgtgatcttggctcactgcaacctctgcctcccaggttcaagtgattctcctccttcagccacctgagtagctgagatgacaggtgtgcaccaccacgcctggctattttgta--ttttttagtagagacggg--gtttcatcatgttggctaggctggtcccgaactcctgacctcaagtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccactgtgcccggccTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45367534 252 + 49145316 gcagtggtatgatcttggctcattgcaacctccacctcccaggttcaagcgattctcctgcctccgcctcccgagtagctgggattacaggcatgcaacaccatgtctggctattttgtattttttttagtagagacggggtgtttcaccatgttggtcaggctggtcttgaacctctgacctcaagtgaccagcccacctcggcctcccaaagtgccaggattacaggcatgagccactgctcctggccTT i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19590638 87 - 122678785 I a score=1749891.000000 s hg38.chr19_GL949747v2_alt 94290 574 + 729520 CCCATTCTTCTT-----------------GAATGGAATTTGTTGATGACAGGAAGCCATAGGAGGTTTCTGGGGAAAGAAGTGTAGTGAG-AGGGCAGAGTTTCGGG-AGACTCACTGCTTGCTTTCTT-----TAACGTTTACctg-ggcacccagttg--------------------------------aatcgcccaggtctttgctctcaaagtactcaaggtctagtggaagaggcaggccaggttccagacagctatcagt-ggtggtacc--------------aagctggggacaccggagccacaggagggactggctgaccctgccccaggtgtcagg-aagaatcgatagctgaattggactgtagagcatgaatgcatgtgccaggcaaagaaagggagaagggggccca-----------------gggaaagacagcggcaggcccggggcctcagatatccggagagaga---------------------------atcctgcagagttccagATGCCAGGCCAAGGAATTTCTCCCTCCAGAGGGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCCGTCACACCCGGTGTCTGGTTGAGGAGGCAGAGGTGAAACATCTCACAAGCT-GTGGCAGTCCCTG s panTro4.chr19 59027855 561 + 63644993 CCCATTCTTCTT-----------------GAATGGAATTTGTTGATGACAGGAAGCCATGGGAGGTTTCTGGGGAAAGAAGTGTAGTGAG-AGGGCAGAGTTTCGGG-AGACTCACTGCTTGCTTTCTT-----TAACGTTTACctg-ggtacccagttg--------------------------------aatcgcccaggtctttgctctcatagtactcaaggtctagtggaagaggcaggccaggttccagacagctatcagt-ggtggtacc--------------aagctggggacaccggagccacaggagggactggctgaccctgccccagatgtcagggaagaatcgatagctgaattggactatagagcatgaatgcatgtgccaggcaaagaaagggagaagggggccca-----------------gggaaagacagcggcaggCCCGGGGCCTCAGATATCCAGAGAGA-----------------------------------------TCCAGATGCCAGGCCGAGGAATTTCTCCCTCCAGAGGGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCCGTCACACCCAGTGTCTGGTTGAGGAGGCAGAGGTGAAACATCTCACAAGCT-GTGGCAGTCCCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55905716 577 + 60714840 CCCATTCTTCTT-----------------GAATGGAATTTGTTGACGACACAAAGTCATGGGAGGTTTCTGGGGAAAGAAGTGTCGTGAG-AGGGCAGAGTTTCGGG-AGACTCACTGCTTGCTTTCTT-----TAACGTTTACCTg-ggcacccagttg--------------------------------aatcgcccagttctttgctctcaaagtgctcaaggtctagtggaagaggcaggccaggttccagacagctatcggcgggtggtacc--------------aagctggggacaccggagccacaggagggactggctgaccctgccccaggtgtcagggaagaatcgatagctgaattggactgtagagcatgaatgcatgtgccaggtaaagaaagggagaagggggccca-----------------gggaaagatagctgcaggcctggggtctcagacatccagagagaga---------------------------atcctgcagagtTCCAGATGCCAGGCCGAGGAATTTCTCCCTCCAGAGGGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCTGTCACACCCGGTGTCTGGTTGAGGAGGTAGACGTGAAACATCTCACAAGCTGGTGGCAGTCCCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102669110 573 - 106955855 CCCATTCTTCTT-----------------GACTGGAATTTGTAGACAACAGGAAGCCATGGGAGGTTTCTGGGCAAAGAAGTGTAGTGAG-AGGGCAGCGTTTCAGG-AGACTCACTGCTTG----CTT-----TAACGTTTACCTg-ggcacccagttg--------------------------------aatcgcccaggtctttgctctcaaagtgctcaaggtctagtggaagaggcaggccaggttccagacagctgtcggcgggtggtacc--------------aagctggggacaccggagccacaggagggactggctgaccctgccccaggtgtcagggaagaatcgatagctgaatgggactgtagagcatgaatccatgcgccaggcaaagaaagggagaagggggccca-----------------gggaaagacagcggcaggCCCGGGGTCTCAGACATCCGGAGAGAGA---------------------------ATCCTGCAGAGTTCCAGATGCCAGGCCGAGGAATTTCTCCCTCCAGAGGGTTATGGGACACAG--AAAGTGACATTTCCTGATGTTAGGCCAGGCTCAGGGATGGAGTCAGACCCCATCACACCCGGTGTCTGGTTGAGGAGGTAGACGTGAAACATCTCACAAGCTCGTGGCAGTCCCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59952921 597 + 64156825 CCCATTCTTCTT-----------------GAATGGAATTTGTTGACAACAGGAAGCCATGGGAGGTTTCTGGGGGAAGAAGTGTAGTGGG-AGGGCAGAGTTTTGGG-AGACTCACTGCTTACTTGCTT-----TAAGGTTTACCTG-GGCACCCAGTTG--------------------------------AATTGCccgggtctttgcgctcaacgtgctcaaggtctagtggaagaggcaggccgggttccagacagctgtcggcgggtggtacc--------------aggctggggacgctggagtcacaggagggactggctgaccctgccccaggtgccagggaagaatcgatagctgaattggactctagagcgtgaatgcatgtgccaggcaaagaaagggagaagggggccc-----------------------agacagcggC-GGCCCGGGGCCTCAGGCATCTGGAGAGAGAGGGCAGGCTCTGGAGCAAAAACACCAGATCCTGCAAAGTTCCAGAGGCCAGGCCGAGGAATTTCTCCATCCAGAGAGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCTGTCACACCTGGTGTCTGGTGGGGGAGGAAGACGTGAAACACCTCACAGGCAGGTGGCAGTCCCCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54956864 593 + 59248254 CCCATTCTTCTT-----------------GAATGGAATTTGTTGACAACAGGAAGCCATGGGAGGTTTCTGGGGGAAGAAGTGTAGTGGG-AGGGCAGAGTTTTGGG-AGACTCACTGCTTACTTGCTT-----TAAGGTTTACCTg-ggcacccagttg--------------------------------aattgcccgggtctttgcgctcaacgtgctcaaggtctagtggaagaggcaggccgggttccagacagctgtcggcgggtggtacc--------------aggctggggacgctggagtcacaggagggactggctgaccctgccccaggtgccagggaagaatcgatagctgaattggactctagagcgtgaatgcatgtgccaggcaaagaaagggagaagggggccc-----------------------agacagcggC-GGCCCGGGGCCTCAGGCATCTGGAGAGAGAGGGCAGGCTCTGGAGC----GCACCAGATCCTGCAAAGTTCCAGAGGCCAGGCCGAGGAATTTCTCCATCCAGAGAGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCTGTCACACCTGGTGTCTGGTGGGGGAGGAAGACGTGAAACACCTCACAGGCAGGTGGCAGTCCCCG i macFas5.chr19 C 0 I 174 s papAnu2.chr19 47086826 591 + 51301725 cccaTTCTTCTT-----------------GAATGGAATTTGTTGACAACAGGAAGCCATGGGAGGTTTCTGGGGGAAGAAGTGTAGTGAG-AGGGCAGAGTTTTGGG-AGACTCACTGCTTGCTTGCTT-----TAAGGTTCACCCA-GGCACCCAGTTG--------------------------------AATCGCCCGGGTCTTTGCGCTCAACATGCTCAAGGTCTAGTGGAAGAGGCAGGCCAGGTTCCAGACAGCTGTCGGCGGGTGGTACC--------------AGGCTGGGGACGCTGGAGTCACAGGAGGGACTGGCTGACCCTGCCCCAGGTGCCAGGGAAGAATCGATAGCTGAATTGGACTCTAGAGCGTGAATGCATGTGCCAGgcaaagaaagggagaa---ggcCC-----------------------AGACAGCGGCAGGCCCGGGGCCTCAGGCATCTGGAGAGAGAGGGCAGGCTCTGGAGC----GCGCCAGATCCTGCAGAGTTCCAGATGCCAGGCCGAGGAATTTCTCCATCCAGAGAGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCTGTCATACCTGGTGTCTGGTGGGGGAGGAAGACGTGAAACACCTCACAAGCAGGTGGCAGTCCCCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46794694 594 + 50890351 CCCATTCTTCTT-----------------GAATGGAATTTGTTGACAACAGGAATCCATGGGAGGTTTTTGGGGGAAGAAGTGTAGTGAG-AGTGCAGAGTTTTGGG-AGACTCACTGCTTGCTTGCTT-----TAAGGTTTACCTg-ggcacccagttg--------------------------------aatcgcctgggtctttgcgctcaacgtgctcaaggtctagtggaagaggcaggccaggttccagacagctattggcgggtggtacc--------------aggctggggacactggagcctcaggagggactggctgaccctgccccaggtgccagggaagaatcgatagctgaattggactctagagcgtgaatgcatgtgccaggcaaagaaagggagaagggggccc-----------------------agacagtggCAGGCCTGGGGCCTCAGGCATCTGGAGAGAGAGGGCAGGCTCTGGAGC----GCGCCAGATCCTGCAGAGTTCCAGATGCCAGGCCGAGGAATTTCTCCATCCGGAGAGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCCGTCACACCTGGTGTCTGGTGGGGGAGGAAGACGTGAAACACCTCACAAGCAGGTGGCTATCCCCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45367786 614 + 49145316 CCCATTCATCTT-----------------GAATGAAATTTCCTGACAACAGGAAGCCATGGGAGGTTGCTGGGCAAAGACGTGT-GTGAG-AAAGCCGAGTTTCAGG-AGACCCACTGCCTGCTGTCTT-----TAATGTTTACctg-ggcacccagtgg--------------------------------aaacccccaggtctgtgctct-aatgtgctcaaggtctggtggaagaggcaggccaagttccagacagctgtcagtgggtgatacc--------------aagctggggccactggagccacaggagggactggctgaccctgccccaggggtcagggaagaattgatggctgaactggactctagagcatgaatgcatacgccaggggaagaaagggaggaaggggcctgggaaagaaaaGGGGGCCGGGAAAGAAAGCGGCACGCCCAGGGCCTCAGATACTAGGAGTGAGAGGGCGGGCTCAGGAAT----GTGCCAGATCCTGCAGGGTTCCAGATGCCAGGCCGGGGAACTTCTCCATCCAGAGAGTTATGGGACACAG--AAGGTGACATTTCCTGATGTCAGGCCAGGAGCAGGGAT-GAGTCAGATCCCGTCATACACGGTGTCTGGTTGGAGAGGTAGTCATGAAACATCTCACAAGCAGGTGGCAGTTCCTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19590725 634 - 122678785 CCCATTCTTCTTAACAGTTTGGAGTTCCGGAATGGAATTCATTGGCAG-AGGCAGCCATGGGAGGTTG-TCAGTGCAGCAGTGGTGTGGGCAGAGCAGAGTTGCAGGCAGACCTACTCTTTCCTTCCTTCCTTGTAAAGTTTTCATGAGGTGCCCTGTGGCAAGCCCGCATGGGCACTGGGTGCACTGGGGAACCCACCCAACTCTCTGCTCTCAGGATACTCGGTGTCTGGCAAAGCGGATAGGTCAGG-TCTGGGCAGTGGTT-GTGGGCGGTGCCTGCTGGGGTGGGGAGAGCTGGGGGCATTGGAGCCACCAGAGCGG--GGCTGACCCTGCCTCAGG--------------CCATACCTGAAATTGGCTTTGAAGCATGAATACACATACCAGGCCAAGAACAGCAGCTATATGCCCT-----------------GAGAAAGAGAACTGTGTGTGCAAAGCCTCACATGTCTGGAGTGGCAGAGGCAGCAGGAGAAA----GTGCCAGATCCTGCAGGATTTTGAGCACCAGG-----------------CCAGCGAGCTGTGGGGAGCGGTAGAAGGGACACTCCCTGATGTCGGGTCAGGCTCGGAGTTAG-GTCAGACCTGATCTCACCTGGTgtttggtggaggaggtgaacacagaacacctccaacctgggtggcggttatg- i canFam3.chr1 I 87 C 0 e mm10.chr7 3631070 1141 + 145441459 I a score=109212.000000 s hg38.chr19_GL949747v2_alt 94864 34 + 729520 TTTACTGGAGGT-GCACAAGTGCTGCGGGTACACA s panTro4.chr19 59028416 34 + 63644993 TTTACTGGAGGT-GCACAAGTGCTGCGGGTACACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55906293 34 + 60714840 TTTACTGGAGGT-GCACAAGTGCTGCGGGTACACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102669683 34 - 106955855 TTTATTGGAGAT-GCACAAGTGCTGCGGGTACACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59953518 34 + 64156825 TTTACTGGAGGT-GCACGAGTGCTGCGGGCACACA i rheMac3.chr19 C 0 I 232 s macFas5.chr19 54957631 34 + 59248254 TTTACTGGAGGT-GCACAAGTGCTGCGGGCACACG i macFas5.chr19 I 174 C 0 s papAnu2.chr19 47087417 34 + 51301725 TTTACTGGAGGT-GCACAAGTGCTGCGGGTACACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795288 34 + 50890351 TTTACTGGAGGT-GTGCAAGTGCTGCGGGTACACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368400 32 + 49145316 TTTATTGGAG---GCACAAGTGCTGCAGGTACCCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19591359 35 - 122678785 tctaacggatgtggcaggagttccgcaggagcaca i canFam3.chr1 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I a score=522952.000000 s hg38.chr19_GL949747v2_alt 94898 169 + 729520 GAGGAGGCGTCTGATCCTTCCAGAAAGGGAGGGAAGGATTCTGAGTCGCTGCCTGAGTCTTAAGGACTTAAAGAGCCATTTGagc-atcagggttaggagtgcagactctgacgccgccctgcctggtgtcagatctgagctctgccttctactgg--ctgtgacatcaggc s panTro4.chr19 59028450 169 + 63644993 GAGGAGGCGTCTGATCCTTCCAGAAAGGGAGGGAAGGATTCTGAGTCGCTGCCTGAGTCTTAAGGACTTAAAGAGCCATTTGagc-atcagggttaggaacacagactctgaagccaccctgcctggtgtcagatctgagctctgccttctactgg--ctgtgacatcaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55906327 169 + 60714840 GAGGAGGCGTCTGATCCTTCCAGAATGGGAGGGAAGGATTCTGGGTCGCTGCCTGAGTCTTAAGGGCTTAAAGAGCCGTTTGagc-atcagggttaggaacccagactctgaagccgccctgcctggggtcaggtctgagctctgccttctactgg--ctgtgGCATGAGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102669717 168 - 106955855 GAAGAGGCGTCTGATCCTTCTGGAAAGGGAGGGAAGGATTCTGAGTCGCTGCCTGAGTCTTAAGGACTTAAAGAG-CATTTGagc-atcagggttaggaacacagactctgaagccaccctgcctggggtcagatctgagctctgccttctactgg--ctgtgacatcaggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59953784 167 + 64156825 GAGGAGGCGTCTGATCCTCCCAGACAGGGAGGGAAGGATTCTGAGTCACTGCTGGAGTCTTAAGGACTTAAAGAGCCTTTTGagc-atcagggttaggaacac--attctgaagccaccctgcttggggtaaggtctgagctctgctgtctactgg--cggtgacatcagac i rheMac3.chr19 I 232 C 0 s macFas5.chr19 54957665 167 + 59248254 GAGGAGGCGTCTGATCCTCCCAGACAGGGAGGGAAGGATTCTGAGTCACTGCTGGAGTCTTAAGGACTTAAAGAGCCTTTTGagc-atcagggttaggaacac--attctgaagccaccctgcttggggtcaggtctgagctctgctgtctactgg--cggtgacatcagac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47087451 167 + 51301725 GAGGAGGCATCTGATCCTCccagaaagggagggaaggattCTGAGTCACTGCCGGAGTCTTAAGGACTTAAAGAGCCTTTTGAGC-ATCAGGGTTAGGAACAC--ATTCTGAAGCCACCCTGCTTGGGGTCAGGTCTGAGCTCTGCTGTCTACTGG--CTGTGACATCAGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795322 167 + 50890351 GAGGAGGCGTCTGATCCTTCCAGAAAGGGAGGGAAGGATTCTGAGTCACTGCCGGAGTCTTAAGGACTTAAAGAGCCATTTGagc-atcagggttaggaacac--attctgaagccaccctgcttggggtcaggtctgagctctgctgtctactgg--ctgtgACATCAGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368432 155 + 49145316 GAGAAGGCATCTGATCCTTCCGGAAAGGGAGGGAACGGTTCTGAGTCGCTGCCTGAGTCTTAAGCACCACAAGAGCCATTTGagc-atcagggttaggagcacagactctgcagccaccctgcctggggtcagatttgagctct----------------gtgacATCAGGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19591394 154 - 122678785 gaggagacatctgaccctcctgaagggggagggaaggatcctgaggtgctgtctgagTCTCAAGA---TGCAGAAACATTTGAGTGATCAGggttaagaatgcaggtgc---------------tggggctagatctcaggtctgccatctgctgggtccatggctttaggc i canFam3.chr1 C 0 I 259 e mm10.chr7 3631070 1141 + 145441459 I a score=456153.000000 s hg38.chr19_GL949747v2_alt 95067 159 + 729520 agttaGTATTTGCATGACTTTTAAACACAACAtc-tttttgtttgtttgttttttgagacagggtctcactctgtcacccaggccagaatgcagtggcacgatcccagctcactgcagccttgacct-------tgtgggctcaggcgttcctgcctcagcctccca s panTro4.chr19 59028619 156 + 63644993 agttaGTATTTGCATGACTTTTAAACACAACAtc-tttttgtttgtttgttttttgagacagggtctcactctgtcacccaggccagaatgcagtggcacgatcccagctcactgcagccttgacct----------gggctcaggcgttcctgcctcagcctccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55906496 159 + 60714840 AGTTAGTATTTGCATGACTTTTAAACACAACAtc-tttttgtttgtttgttttttgagacagggtctcactctgtcacccaggccagaatgcagtggcacgatcccagctcactgcagccttgacct-------tctgggctcaggcgttcctgcctcagcctccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102669885 159 - 106955855 agttaGTATTTGCATGACTTTTAAACACAACAtc-tttttgtttgtttgttttttgagacagggtctcactctgtcacccaggccagaatgcagtggcacgatcccagctcactgcagccttgacct-------tctgggctcaggcattcctgcctcagcctccca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59953951 155 + 64156825 agttaGTATTTGTATGACATTTAAACACAACAtc-----tttttgtttgttttttgagacagggtctcactctgtcacccaggccagaatgcagtggcacgatcgcagctcactgcagccttgacct-------tctgggctcaggtgttcctgcctcagcctccca i rheMac3.chr19 C 0 M 136 s macFas5.chr19 54957832 155 + 59248254 agttaGTATTTGTATGACATTTAAACACAACAtc-----tttttgtttgttttttgagacagggtctcactctgtcacccaggccagaatgcagtggcacgatcacagctcactgcagccttgacct-------tctgggctcaggtgttcctgcctcagcctccca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47087618 155 + 51301725 AGTTAGTATTTGTATGACATTTAAACAcaacatc-----tttttgtttgttttttgagacagggtctcactctgtcacccaggccggaatgcagtggcacgatcacagctcactgcagccatgacct-------tctgggctcaggtgttcctgcctcagcctccca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795489 156 + 50890351 ----AGTATTTGTATGACATTTAAACACAACAtcttttttttttgtttgttttttgagacagggtctcactctgtcacccaggccggaatgcagtggcacgatcacagctcactgcagccttgacct-------tctgggctcaggtgttcccgcctcagcctccca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368587 159 + 49145316 AGTGAG----TGTATGACATTTAAACACAGCATC---ACtttttgtttgttttttgagacagggtctcactctgaca-ctaggtgagaatgcagtggcatgaacgcagctcactgcagccctgaccttctgggttctgggttccggcgttcctgcctcagcctccca i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19591548 259 - 122678785 I a score=327248.000000 s hg38.chr19_GL949747v2_alt 95226 145 + 729520 ggcagctgggaccacaggtgtacaccaccatgcctggctaatt-ttttttctttaattatgtgtagagatggggtctccctatgtcgcccaggttgctctccaactcctgggctcaagcagttctcctgcctcagcctcccaaagt s panTro4.chr19 59028775 145 + 63644993 ggcagctgggaccacaggtgtacaccaccatgcctggctaatt-ttttttctttaattatgtgtagagatggggtctccctatgtcgcccaggttgctctccaactcctgggctcaagcagttctcctgcctcagcctcccaaagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55906655 144 + 60714840 ggcagctgggaccacaggtgtacacc-ccatgcctggctaatt-ttttttctttaattatgtgtagagatggggtctccctatgtcgcccaggttgctctccaactcctgggctcaagcagttctcctgcctcagcctcccaaagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102670044 140 - 106955855 ggcagctgggaccacaggtgtacaccaccatgcctggctaatt-tt-----tttaattatgtgtagagatggggtctccctatgtcgcccaggttgctctccaactcctgggctcaagcagttctcctgcctcagcctcccaaagt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54957987 146 + 59248254 ggcagttaggaccacaggcatacaccaccatgcctggctaattattttttctttaattatttgtagagatggggtctccctatgttgcccaggttgctcttgaactcctgggctcaagcagttctcctgcctcagcctcccaaagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47087773 146 + 51301725 ggcagttaggaccacaggcatacaccaccatgcctggctaatttttttttctttaattatttttagagatggggtctctctatgttgcccaggttgctcttgaactcctgggctcaagcagttctcctgcctcagcctcccaaagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795645 146 + 50890351 ggcagttaggaccacaggcatacaccaccatgcctggctaattattttttctttaattatttgtagagatggggtctccctgtgttgcccaggttgctcttgaactcctgggctcaagcagttctcctgcctcagcctcccaaagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368746 143 + 49145316 gatagctaggaccacaggcatacaccaccatgcctggctcatt-ttttttctttaattatctgtagagatgggatc-ccctgtgtcgcccagtttgctctgaaac-actgggctcaagcagttctccagcctgcgcctcccaaagt i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19591548 259 - 122678785 I e rheMac3.chr19 59954106 136 + 64156825 M a score=95902.000000 s hg38.chr19_GL949747v2_alt 95371 30 + 729520 gctgggattacaggtatgagccactgtgcc s panTro4.chr19 59028920 30 + 63644993 gctgggattacacttatgagccactgtgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55906799 30 + 60714840 gctgggattacaggtatgagccactgtgcc i ponAbe2.chr19 C 0 I 118 s nomLeu3.chr10 102670184 30 - 106955855 gctgggattacaggtatgagccactgtgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59954243 30 + 64156825 gctaggattacaggcgtgagccactgtgcc i rheMac3.chr19 M 136 C 0 s macFas5.chr19 54958133 30 + 59248254 gctgggattacaggtgtgagccactgtgcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47087919 30 + 51301725 gctgggattacaggtgtgagccactgtgcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795791 30 + 50890351 gctgggattacaggtgtgagccactgtgcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368889 30 + 49145316 gctgggattacaggtgtgagccactgtgcc i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19591548 259 - 122678785 I a score=34557.000000 s hg38.chr19_GL949747v2_alt 95401 16 + 729520 -tgaccTCTTATTActa s panTro4.chr19 59028950 16 + 63644993 -tgaccTCTTATTActa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102670214 16 - 106955855 -tggccTCTTATTActa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59954273 16 + 64156825 -tggccTCTTATTActa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54958163 16 + 59248254 -tggccTCTTATTActa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47087949 16 + 51301725 -tggcctcttattACTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795821 16 + 50890351 -tggccTCTTATTACta i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368919 17 + 49145316 tggccCCCTTATAACCA i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19591548 259 - 122678785 I e ponAbe2.chr19 55906829 118 + 60714840 I a score=1010476.000000 s hg38.chr19_GL949747v2_alt 95417 391 + 729520 aagcacaaagaagcgttttccagaaacagacgtggggtaagggatgctctggggagagggagcagcacatgcagaggccaggaggggtctggcgcggtggctcacgcctgtcatcccagcactttgggtggtcaaggcagatggatcacctgaggtcgggagttcgagaccagcctgcccaacatggtgaaaccccgtctctactaaaaatacaaacaaacaaaaaaaattagccgggcgtggtggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatcatgccactatactctagcctgggcaaccagagcgaaattatgtctcaaaaaaaaaa-aa s panTro4.chr19 59028966 388 + 63644993 aagcacaaagaagcgttttccagaaacagacgtggggtaagggacgctctggggagaaggagcagcacatgcagaggccaggaggggtctggcgcggtggctcacgcctgtcatcccagcactttgggtggtcaaggcagatggatcacctgaggtcgggagttcgagaccagcctgcccaacatggtgaaaccctgtctctactaaaaatacaaaaaaa-aaaaaaaattagctgggcatggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagatcatgccactatactctagcctgggcaaccagagcgaaattatgtctcaaaaaaaaaa--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55906947 378 + 60714840 AAGCACAAagtagcgtttcccagacacagaca-ggggt-agggacgctct-gggagagggaacaccacatgcaaagccca-gaggggtcgggcgt-gtagcttacgcctgtcatcccagcactttgggtggtcaaggcaggtggatcacctgaggttgggagttcgagaccagcctgcccaacatggtgaaaccctgtctctactaaaaatacaa------aaaaaaaattagttgggcgtggtggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatcgtgccactatactctagcctgggcaacaagagcgaaattatgtctcaaaaaaaaaa--- i ponAbe2.chr19 I 118 C 0 s nomLeu3.chr10 102670230 390 - 106955855 aagcacaaagaagcgttttccagaaacagacatggggtaagggacgctctggggagagggaacagcacatgcaaaggccaggaggggtctggcatggtggctcacgcctgtcatcccagcattttgggtggtcaaggcaggtggatcacctgaggtcgggagttcgagaccagcctgcccaacatggtgaaaccctgtctgtactaaaaatataaaaaa--aaaaaaaattagctgggcgtggtggtgcatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagctgagatcatgccactatactctagcctgagcaacaagagcgaaattatgtctctaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59954289 378 + 64156825 aagcacaaagaagggttttccagaaacagacatggggtaagggatgctctggggagagggaacagcatatgcaaagtccaagaggggccttgcatggtggctcatgcctgtcgtcccagcac--tgggtggccaaggctggtggatcacctgaggtcgggagttcgagatcagtctgcccaacatggtgaaaccccatctctactaaaaatac--------aaaacaagttcgcggggcgtggtggcgggcgcctgtaatcccaactacttggggggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagctgagatcgtgccactacactctagcctgggcaacaagagtgatactccatctc-aaaaaaaaa--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54958179 379 + 59248254 aagcacaaagaagggttttccagaaacagacatggggtaagggatgctctggggagagggaacagcatatgcaaaggccaagaggggccttgcatggtggctcatgcctgtcgtcccagcac--tgggtggccaaggctggtggatcacctgaggtcgggagttcgagatcagcctgcccaacatggtgaaaccccatctctactaaaaatac--------aaaacaagttagcagggcatggtggcgggcgcctgtaatcccaactacttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagctgagatcgtgccactacactctagcctgggcaacaagagtgacactccatctcaaaaaaaaaa--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47087965 379 + 51301725 AAGCACAAAGAAGGGTTTTCCAGAAATAGACATGGGGTAAGGGACGCTCTGGGGagagggaacagcatatgcaaaggccaGGACGGGCcttgcatggtggctcatgcctgtcgtcccagcac--tGGGTggtcaaggctggtggatcacctgaggttgggagttcgagatcagcctgcccaacatggtgaaaccccatctctactaaaaatac--------aaaacaagttagcggggcatggtggcgggtgcctgtaatcccaactacttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagctgagatcgtgccactacactctagcctgggcaacaagagtgacactccatctcaaaaaaaaaa--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795837 379 + 50890351 aagcacaaagaagggttttccagaaacagacatggggtaagggatgctctggggagagggaacagcatatgcaaaggccaggaggggccttgcatggtggctcatgcctgtcgtcccagcac--tgggtggtcaaggctggtggatcacctgaggtcgagagttcgagatcagcctgcccaacatggtgaaaccccatctctactaaaaatac--------aaaacaagttagcgggggatggtggcgggcgcctgtaatcccaactacttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagctgagatcgtgccactacactctagcctgggcaacaagagtgaaactccatctcaaaaaaaaaa--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368936 353 + 49145316 AAGCACAA---AGGGTTTTCtggaaacagacgtg-----------------gggagacggaacagcatatgcagaggccaggaggggccagatgcagtgggtcacccctgtaaccccaccactgtggggggcccaggcgggcggatcacctgaggttgggagttcgagaccaacctggccaacatggtgaaaccccatctctactaaaaataccc------ccaaaaatttagctgggcatggtggcacatgcctgtaattccacctactgaggaggcccaggc---agaattgcttgaacctgggaggcggaagttgcagtgagccgagatggtgct------ctgtagcctgggcaacaagagcgaaactccg-agaaaaaaaaaaa--- i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19591548 259 - 122678785 I a score=157140.000000 s hg38.chr19_GL949747v2_alt 95808 52 + 729520 aaaggctaggaggagtgggtgt-----------ctgggg-cactgtgatcactcctttatggct s panTro4.chr19 59029354 50 + 63644993 ---ggctaggaggagtgggtgt-----------ctgtgatcactgtgatcactcctttatggct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55907325 51 + 60714840 -aaggctaggaggagtgggtgt-----------ctgggg-cactgtgatcactcctttatggct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102670620 52 - 106955855 aaagcctaggaggagtgggtgt-----------ctgggg-cactgtgatcactcctttatagct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59954667 49 + 64156825 ---ggccaggaggagtgggtgt-----------ctgggg-cactgtgaccagtcctttatggct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54958558 49 + 59248254 ---ggccaggaggagtgggtgt-----------ctgggg-cactgtgaccagtcctttatggct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47088344 49 + 51301725 ---ggccaggaggAGTGGGTAT-----------CTGGGG-CACTGTGACCAGTCCTTTATGGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46796216 49 + 50890351 ---ggccaggaggagtgggtgt-----------ctgggg-cactgtgaccagtcctttatggct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45369289 49 + 49145316 ---ggccaggaggagtgggtgt-----------ccaggg-cactgcaatcagtcctttgtggct i calJac3.chr22 C 0 C 0 s canFam3.chr1 19591807 63 - 122678785 agaggcccagaggagaggaagcagccctgagtgctcggg-cactgcagtcagtccttcctggct i canFam3.chr1 I 259 C 0 e mm10.chr7 3631070 1141 + 145441459 I a score=5351595.000000 s hg38.chr19_GL949747v2_alt 95860 1748 + 729520 ggagtggaataaaatga-ggtgt---------ggtgagaggatggggcgggaagggcg-ggaggccag-actgCAGAGCTGCTGAGtcagcaaacaggaacgggggaactccctgtgtgccaggtgctgtcctgggtactc---ggctgtgggtacagccaacgcaggcacagcactggtccctgcagagcttccggagttggggaggcCCTGAATGTCAGTCTGAGGA-CTCG---------GTCATTAGCCTTGGGGCTGTGGGGAG-CCGTAGGAGGTTTCA----CACGGTCAGTTCTGGGGT-AGATGGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGAAG----GCAGGAACACAAGTTCAGG-GATGTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGACATCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCCTCCCAACTTCATCCTCCGCCTCCTCCAGCTGCGGGACCCGAGAGGGGGTAGGGATTTAGATACTCA--CACCCATGC--CTCCGTGTCCTCACAGTGATGGGACCAGTGGAGGCCGCGCCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCTGGGGGGCAG--GCGGAGACAGCCCCGTGTGACGTCCCTCACGCCCCCTCTCCC------------------------------------TTCCCCA---------------------CTGGCCTTTCCCAGGGTCCTGCCCCTAAGCC------CAA-----GCTCAGATCGAGGTTGACCTGCTGTCACAGagtggctgaaataagaaggaagtgcgttct---ctcg--------------------------------------------cgtatgagtctgag-gagca-ctcggggatggtgtggccgcttggctgcctgtagggccccggctctttccatcctgttggtcggccacctgcctcacggtgcgaggtgactgccccacctccagccatcacctccgcattcccaccagca----------------aggcgct--tc-ttttctttaagaaca-------------------tg------------------tcactg-----cagctcacgttttacagac-----cagaactaattcccctggtcacacctagcggtaaggacggctgagaa----aggctgtatgct-ggtgcccgtgtgccaggccacaagccagggcttcagttactaaaggaagaag--gggacatgggtgttagggccaaccagcagagtctaccTTCCATCTCACCCGACAACCTCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCAAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGCGCAGAGAAG----------------GTGGGGTG-----------------------------CTTCTG-------CTGGCGTGAAGGGGCAGGCGGGGCTCA---------------------CTCTCGGACCCCCTCCCAGAGGCCTCAG-------------------GGTCTGGAGACGATGGAGAGGAGTGGACGAGGGCTCAGTGGT-CTGCTCTGCCCAGCGTGGGAGGGACGGAGCCTGGACAGGACTT----------TCTCAGGGCTCCCCTCCAACCCC-------------------------AGTCTCCCGAGAGGGCTTCCCCGCTG-----GCCTGA----------------------------CCCACGCTGCTCCCGCTGTGGTTGGAGCCGGTGGCATT-GGAGTTGACATCCGAAGGTTGACACAGGG-CAGGCACACGGAGATTTGGGGCAGAGAGACGTC-TAAGTGCAGAGAGCTGGA---------------------------------GA-GGGAAC-------------------------------------------------AAGT---------------GGGGAGGAAGTGAGGCGGGGAAGGAGGGGACGG-GGAAGAGGTCGGATC--------ACGTCCAG-CCTTTGGGTCTTAGGAGAAAGCCAAGGAAGGGTTTCGG---------AAAAGA--GGGGCAGGTGTGCGTGAGGGCGGGGA----GAGGAGGAGGTCCCCACGCATGTCCAGGAAAGGATTAGGATG s panTro4.chr19 59029404 1713 + 63644993 ggagtggaataaaatgg-ggtgt---------ggtgagaggatggggcgggaagggca-ggaggccag-actgCAGAGTTGCTGAGtcagcagataggaactgggcaactccctgtgtgccaggtgctgtcctgggtactc---gggtgtgggtacagccaacgcaggcacagcactggtccctgcagagcttctggagttggggaggcCTTGAATGTCAGTCTGAGGA-CTCG---------GTCATTAGCCTTGGGGCTGTGGGGAG-CTGTAGGAGGTTTCA----CACGGTCAGTTCTGGGGT-GGATGGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGAAG----GCAGGAACACAAGTTCAGG-GATGTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGACATCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCCTCCCAACCTCATCCTCCGCCTCCTTCAGCTGCGGGACCCGAGAGGGGGTAGGGAGTTAGATACTCA--CACCCATGC--CTCCGTGTCCTCACAGTGATGGGACCAGTGGAGGCAGCACCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAATGAGCTGAGTGAGTGCTGGGGGGCAG--GCGGAGACAGCCCTGTGTGACGTCCCTCACGCCCCCTCTCCC------------------------------------TTCCCCA---------------------CTGGCCTTTCCCAGGGTCCTGCCCCTAAGCC------CAA-----GCTCAGATCGAGGTTCACCTGCTGTCACAGagtggctgaaataagaaggaagtgcgttct---ctcg--------------------------------------------cgtatgagtctgag-gagca-cttggggatggtgtggccgcttggctgcctgtagggccccggctctttccatcctgttggtcggccacctgcctcacggtgcgaggtgactgccccacctccagccatcacctccgcattcccaccagca----------------aggcgct--tc-ttttctttaagaaca-------------------tg------------------tcactg-----cagctcacgttttacagac-----cagaactaattcccctggtcacacctagcggtaagggcggctgagaa----agcctttatgct-ggtgcccgtgtgccaggctacaagccagggcttcagttactaaaggaggaag--gggacatgggtgttagggccaaccagcagagtctatcTTCCATCTCACCCGACAACCTCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCAAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGCGCAGAGAAG----------------GTGGGGTG-----------------------------CTTCTG-------CTGGTGTGAAGGGGCAGGCGGGGCTCA---------------------CTCTCGGACCCCCTCCCAGAGGCCTCAG-------------------GGTCTGGAGACGATGGAGAGGCGTGGATGAGGGCTCAGTGGT-CTGCTCTGCCCAGCGTGGGGGGGACGGAGCCTGGACAGGACTT----------TCTCAGGGCTCCCCTCCTACCCC----------------------------------------------CGCTG-----GCCTGA----------------------------CCCACGCTGCTCCCGCTGTGGTCGGAGCCGGTGGCATT-GG--------------GGTTGACACAGGG-CAGGCACACGGAGATTTGGGGGAGAGAGACGTC-TAAGTGCGGAGAGCTGGA---------------------------------GA-GGGAAC-------------------------------------------------AAGC---------------AGGGAGGAAGTGAGGCGGGGAAGGAGGGGACGG-GGAAGAGGTCGGATC--------ACGTCCAG-CCTTTGGGTCTTAGGAGAAAGCCAAGGAAGGGTTTCGG---------AAAAGA--GGGGCAGGTGTGCGTGAGGGCTGGGA----GAGGAGGAGGTCCCCACGCGTGTCCAGGAAAGGATTAGGATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55907376 1844 + 60714840 ggagtggaataaaatgg-gatgt---------ggtgagaggatggggtgggaagggcg-ggaggccag-actgCAGAGTTGCTGAGtcagcagataggaactgggcaactccctgtgtgccaggtgctgtcctgggtactc---gggtgtgggtatagccaacacaggcacagcactggtccctgcagagcttccggagttggggaggcCTTGAATGTCAGTCTGAGGA-CTTG---------GTCATTAGCCTTGGGGCTGTGGGGAG-CCGTAGGAGGTTTCA----CACAGTCAGTTCTGGGGT-GGATGGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGAAG----GCAGGAACACAAGTTCAGG-GATGTCTGCAGTCGTCAGCCTGTCGCCTGGTTTACTCT-----------------------------------------TCAGCCCCTCCGTCCTGACCCCTCCCAGCCTCATCCTCCGCC-----------------------------------------CCCTCCAGCTGCGGGACCCAGGAGGCAGACATCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCGTCCTGA-CCCCTCCCAGCCTCATCCTCCATCTCCCCCAGCTCTGGGACCCGAGAGGGGGTAGGGATTTAGATACTCA--CACCCATGC--CTCCGTGTCCTCACAGTGATGGGACCAGTGGAGGCAGCGCCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCTGGGGGGCAG--GCGGAGACAGCCCCGTGTGACGTCCCTCACGCCCCCTCTCCT------------------------------------TTCCCCA---------------------CTGGCCTTTCCCAGGGTCCTGCCCCTAAGCG------CAA-----GCTCAGATCAAGGTTCACCTGCTGTCACAGAGTGGTTGAAATAAGAAGGAAGTGCGTTCT---CTCG--------------------------------------------CGCATGAGTCTGAG-GAGCA-CTCGGGGATGGTGTGGCCGCTTGGCTGCCTGTAGGGCCCCGGCTCTTTCCATCCCGTTGGTTGGCCACCTGcctcacggtgcaaggtgactgccccacctccagccatcacctttgcattcccaccagca----------------aggcgct--tc-t----tttaagaaca-------------------tg------------------tcactg-----cagctcacattttacagac-----cagaactaattcccctggtcacacctagcggtaagggcggctaagaaatggaggctgtatgct-ggtgcccgtgtgccaggctacaagccagggcttcagttactaaaggaagaag--gggacattggtgttagggccaaccagcagagtctaccTTCCATCTCACCCGACACCCGCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCGAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGCGCAGAGAAG----------------GCGGGGTG-----------------------------CTTCCG-------CTGGTGTGAAGGGGCAGGCGGGGCTCA---------------------CTCTTGGACCCCCTCCCAGAGGCCTCGG-------------------GGTCTGGAGACGATGGAGAGGAGTGGGTGAGGGCTTAGTGGC-CCAGTCTGCCCAGCGTGGGAGGGACAGAGCCTGGACAGGACGT----------TCTCAGGGCTCCCCTCCTAACCC-------------------------GGTCTCCCGAGAGGGCGTCCCCTCTG-----GCCTGA----------------------------CCCGTGCTGCTCCCACTGTGGTCGGAGCGGGTAG-ATT-GGAGTTGACATCCGAAGGTTGACACAGGG-CAGGCACGCGGAGATTTGGGGGAGAGAGACGTC-TAAGTGCGGAGAGCTGGA---------------------------------GA-GGGAAC-------------------------------------------------AAGC---------------GGGGAGGAAGTGAGGCGGGGAAGGAGGGGATGG-GGAAGAGGTTGGATC--------ACGTCCAG-CCTTTGGGTCTTAGGAGAAAGCCAAGGAAGGGTTTTGG---------AAAAGA--GGGGCGGGTGCGCGTGAGGGCGGGGA----GAGGAGGAGGTCCCCATGCGTGTCTAGGAAAGGATTAGGATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102670672 1748 - 106955855 acagtggaataaaatgg-gatgt---------ggtaaggggatggagtgggaagggcg-ggaggccag-actgCAGAGTTGCTGAGtcagcagataggaactgggcaactccctgtgtgccaggtgctgtcctgggtactc---gggtgtgggtatagccaacgcaggcacagcactggtccctgcagagcttccggagttggggaggcCTTGAATGTCAGTCTGAGGA-CTTG---------GTCATTAGCCTTGGGGCTGTGGGGAG-CCGTAGGAGGTTTCA----CACGGTCGGTTCTGGGGT-GGATGGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGAAG----GCAGGAACACAAGTTCAGG-GATGTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGATGTCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCCTCCCAGCCTCATCCTCCATCTCCCCCAGCTGCGGGACCCGAGAGGGGGTAGGGATTTAGATACTCA--CACCCATGC--TTCCGTGTCCTCACAGTGATGGGACCAGTGGAGGCAGCGCCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCTGGGGGGCAG--GTGGAGACAGCCCCGTGTGACGTCCCTCACGCCCCCTCTCCC------------------------------------TTCCCCA---------------------CTGGCCTTTCCCAGGGTCCTGCCCCTAAGCC------CAA-----GCTCAGATCGAGGTTCCCCTGCTGTCACAGAGTGGCTGAAATAAGAAGGAAGTGTGTTCT---CCCG--------------------------------------------CGCATGAGTCTGAG-GAGCA-CTCGGGGATGGTGTGGCTGCTTGGCTGCCTGTAGGGCCCCGGCTCTTTCCATCCCGTTGGTCGGCCACTTGcctcacggtgcgaggtgactgccccacctccagccatcacctccgcattcccaccagca----------------aggcgct--cc-ttttctttaagaaca-------------------tg------------------tcactg-----ccgctcacagtttacagac-----cagaactaattcccctggtcacacctagcggtaagggcggctgagaaatggagcctgtatgct-ggtgcccgtgtgccaggctacaagccagggcttcagttactaaa----gaag--gggacatgggtgttagggccaaccagcagagtctaccTTCCATCTCACCCGACACCCGCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCAAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCGCTGGATTACATCCGCACGGTCAAGGTGAGAGCAGAGAAG----------------GCGGGGTG-----------------------------CTTCCG-------CTGGTGTGAAGGGGCTGGCGGGGCTCA---------------------CTCTCGGACCGCCTCCCAGAGGCCTCGG-------------------GGTCTGGAGACGATGGAGAGGAGTGGACGAGGGCTCAGTGGC-CTGCTCTGCCCAGCGTGGGAGGGATGGAGCCTGGACAGGACTT----------TCTCAGGGCTCCCCTCCTACCCC-------------------------CGTCTCCCGAGAGGGCTTCCCCGCTG-----GCCTGA----------------------------CCCATGCTGCTCCCACTGTGGTTGGAGCCCGTGGCATT-GGAGTTGACATCCGAAGGTTGACACAGGG-CAGGCACGTGGAGATTTGGGGGAGAGAGACATC-Taagtgcgaagagctgaa---------------------------------ga-gggaac-------------------------------------------------aagc---------------gaggaggaagTGAGGCGGGGAAGGAGGGGACGG-GGAAGAGGTCGGATC--------ATGTCCAG-CCTTTGGGTCTTAGGAGAAAGCCAAGGAAGGGTTTCGG---------AAGAGA--GGGGCGGGTGCGCGTGAGGGCGGGGA----GAGGAGGAGGTCCCCACGCGTGTCCAGGAAAGGATTAGGATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59954716 1879 + 64156825 gga-------------------------------tgagaggatggggtgggaagggtg-ggaggccag-accgcagagttgctgagtcagcagagaggaactgggcagctccctgtgtgccaggtgctgtcccgagtactc---gggtgtgggtgtagataacgcaggcacagcactggtccctgcagagctTCTGGAGTTGGGCAGGCCTTGAATGTCAGTCTAGGAA-CTTG---------GTCATTAGCCTTGGGGCTATGGGGAG-CCATAGGAGGTTTCAGACGGACGGTCAGTTCCAGGGC-AGGTAGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGGAG----GCAGGAACACAAGTTCAGG-GATGTCTGCAGATGTCAGCCTGTCGCCTGCTTTACTCTTCAACCCCTCCTTCCTGACCCCCTCCAGCCTCGTCCTCCGCC----------------------------------------------------------------------------------TCCTCCAGCTGCAGGATCTGGGAGGCAGACGTCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCTTCCCAGCCTCATCCTCCGTCTCCCCCAGCTGTGGGACCTGAGAAGGGGTAGGGATTTAGATCCTCA--CACCCATGCCACTCCGTGTCCTCACAGTGATGGGACCGGTGGAGGCAGCGCCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCT-GGGGGCAG--GCGGAGACAGCCCCCTGTGACGCCCCTCATGCCCC--CTCCC------------------------------------TTCCCCA---------------------CGGGCCTTTCCCAGGGTCCTGCCGCTGAGCC------CAA-----GCTCAGATCGAGGTTCACCTGCTGTAACGGAGTGGTGTAAGTAAGAAGGAAGTGTGTTCTCC-CTCACGTATGAGTCTGAGCGAGCACTCGGGGACGGCGTGGCTCCCTCGCGTATGAGTCTGAGCGAGCA-CTCGGGGACGGCGTGGCCGCTTGGCTGCCTGTAAGGCCCCAGCCCTTTCCATCTTGTTGGTCGGCCACCTGCCTCGTGGTGCGAGGGGACTGCCCCACGTCCAGCCGTCGCCTCTGCATTCCCACCAGCA----------------AGGCACT--TC-TTTTTTTTAAGAaca-------------------tg------------------tcactg-----cagctcacattttacagac-----cagaactaattcccctggtcacacctagcggtaagggcggctgaaaaatggagcctgtatgct-ggtgcccgtatgccaggctacaagccagggcttcagttactaaaggaagaag--gggacgtgggtgttagggccaaccagcagagtctgccTCCCGTCTCACCTGACACCCGCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCGAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGAGCAGAGGAG----------------GAGCGGTG-----------------------------CTTCTG-------CTGGTGTGAAGGTGCAGGCAGGGCTCA---------------------CTCTCGGACCCGCCCCCAGAGGCCTCGG-------------------GGTCTGGAGGTGAAGGAGAGGAGTGGACGGAGGCTCAGTGGC-CTGCTCTGCCCAGGGTGAGAGGGACGGAGCCTGGATGGGACTT----------TCTCAGGGCTCCCCTCGTACCCC-------------------------AATCTCCCGAGAGGGCTTCCCCGCTG-----GCCTGA----------------------------CCCGCGCTGCTTCCGCTGTGGTCGGAGCCGGTGGCATT-GGAGTTGACATCCGAAGGTCGTCACAGGG-CAGGCACGCGGAGATTTGGGGGAGAGAGATGTGTTAAGTATGGAGAGCCGGA---------------------------------GA-GGGAAC-------------------------------------------------AAGC---------------GGGGAGGAAGTGAGGCGGGGAAGGAGGGGACGC-GGAAGAGGTCGGATC--------ACACTGAG-CCTTTGGGTCTTATGAGAAAGCCAAGGAAGGGTTTCGG---------AAAAGA--GGGGCGGATGCAGGTGAGGGCAGGGA----GAGGAGGCGGTCCCCACGTGTGTCCGGGAGAGGATCAGGATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54958607 1835 + 59248254 gga-------------------------------tgagaggatggggtgggaagggtg-ggaggccag-accgcagagttgctgagtcagcagagaggaactgggcagctccctgtgtgccaggtgctgtcctgagtactc---gggtgtgggtgtagataacgcaggcacagcactggtccctgcagagctTCTGGAGTTGGGCAggccttgaatgtcagtctaggga-cttg---------gtcattagccttggggctatggggag-ccataggaggtttcagacagaCGGTCAGTTCCAGGGC-AGGTAGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGGAG----GCAGGAACACAAGTTCAGG-GATGTCTGCAGATGTCAGCCTGTCGCCTGCTTTACTCT-----------------------------------------TCAACCcctccttcctgaccccctccagcctcgtcctccgcc-----------------------------------------tcctccAGCTGCAGGATCTGGGAGGCAGACGTCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCTTCCCAGCCTCATCCTCCGTCTCCCCCAGCTGTGGGACCTGAGAAGGGGTAGGGATTTAGATCCTCA--CACCCATGCCACTCCGTGTCCTCACAGTGATGGGACCGGTGGAGGCAGCGCCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCT-GGGGGCAG--GCGGAGACAGCCCCCTGTGACGCCCCTCATGCCCC--CTCCC------------------------------------TTCCCCA---------------------CGGGCCTTTCCCAGGGTCCTGCCGCTGAGCC------CAA-----GCTCAGATCGAGGTTCACCTGCTGTAACGGagtggtgtaagtaagaaggaagtgcgttctcc-ctca--------------------------------------------cgtatgagtctgagcgagca-ctcggggacggcgtggccgcttggctgcctgtaaggccccagccctttccatcttgttggtcggccacctgcctcgtggtgcgaggggactgccccacgtccagccgtcgcctctgcattcccaccagca----------------aggcact--tc-ttttttttaagaaca-------------------tg------------------tcactg-----cagctcacattttacagac-----cagaactaattcccctggtcacacctagcggtaagggcggctgaaaaatggagcctgtatgct-ggtgcccgtatgccaggctacaagccagggcttcagttactaaaggaagaag--gggacgtgggtgttagggccaaccagcagagtctgccTCCCGTCTCACCTGACACCCGCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCGAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGAGCAGAGGAG----------------GAGCGGTG-----------------------------CTTCTG-------CTGGTGTGAAGGTGCAGGCAGGGCTCA---------------------CTCTCGGACCCGCCCCCAGAGGCCTCGG-------------------GGTCTGGAGGTGAAGGAGAGGAGTGGACGGAGGCTCAGTGGC-CTGCTCTGCCCAGAGTGAGAGGGACGGAGCCTGGATGGGACTT----------TCTCAGGGCTCCCCTCGTACCCC-------------------------AATCTCCCGAGAGGGCTTCCCCGCTG-----GCCTGA----------------------------CCCGCGCTGCTTCCTCTGTGGTCGGAGCCGGTGGCATT-GGAGTTGACATCCGAAGGTCGACACAGGG-CAGGCACGCGGAGATTTGGGGGAGAGAGATGTGTTAAGTATGGAGAGCCTGA---------------------------------GA-GGGAAC-------------------------------------------------AAGC---------------GGGGAGGAAGTGAGGCGGGGAAGGAGGGGACGC-GGAAGAGGTCGGATC--------ACACTGAG-CCTTTGGGTCTTATGAGAAAGCCAGGGAAGGGTTTCGG---------AAAAGA--GGGGCGGATGCAGGTGAGGGCAGGGA----GAGGAGGCGGTCCCCACGTGTGTCCGGGAGAGGATCAGGATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47088393 1917 + 51301725 GGA-------------------------------TGAGAGGATGGGGTGGGAAGGGTG-GGAGGCCAG-ACCGCAGAGTTGCTGAGTCAGCAGAGAGGAACTTGGCAGCTccctgtgtgccaggtgctgtccTGAGTACTC---GGGTGTGGGTATAGATAACGCAGGCACAGCACTGGTCCCTGCAGAGCTTCTGGAGTTGGGCAGGCCTTGAATgtcagtctaggga-cttg---------gtcaTTAGCCTTGGGGCTATGGGGAG-CCATAGGAGGTTTCAGACGGACGGTCAGTTCCAGGGC-AGGTAGGGTCAAGTCTAGActggtgtggag-----------ggagagggatTGGAG----GCAGGAACACAAGTTCAGG-GATGTCTGCAGATGTCAGCCTGTCGCCTGCTTTACTCT----------------------------------------------------------------------------------TCAACCCCTCCTTCCTGACCCCCTCCAGCCTCGTCCTCCGCCTCCTCCAGCTGCAGGATCTGGGAGGCAGACGTCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCTTCCCAGCCTCATCCTCCGTCTCCCCCAGCTGTGGGACCCGAGACGGGGTAGGGATTTAGATCCTCA--CACCCATGCCACTCCGTGTCCTCACAGTGATGGGACCGGTGGAGGCAGCGCCTGAATACCGTGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTAAGTGAGTGCT-GGGGGGAG--GCGGAGACTGCCCTCTGTGACGCCCCTCatgcccc--ctccc------------------------------------ttcccca---------------------cggGCCTTTCCCAGGGTCCTGCCGCTGAGCC------CAA-----GCTCAGATGGAGGTTCACCTGCTGTAACGGAGTGGTGTAAGTAAGAAGGAAGTGCGTTCTCC-CTCG--------------------------------------------CGTATGAGTCTGAGCGAGCA-CTCGGGGATGGCGTGGCCGCTTGGCTGCCTGTAAGGCCCCAGCCCTTTCCATTTTGTTGGTCGGCCACCTGCCTCGTGGTGCGAGGGGACTGCCCCACGTCCAGCCGTCGCctctgcattcccaccagca----------------aggcact--tctttttttttaagaaca-------------------tg------------------tCACTG-----CAGCTCACATTTTACAGAC-----CAGAACTAATTCCCCTGGTCACACCTAGCGGTAAGGGCGGCTGAGAAATGGAGCCTGTATGCT-GGTGCCCGTATGCCAGGCTACAAGCCAGGGCTTCAGTTACTAAAGGAAGAAG--GGGACGTGGGTGTTAGGGCCAACCAGCAGAGTCTGCCTCCCGTCTCACCTGACGCCCGCC------GTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCGAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGAGCAGAGGAG----------------GAGGGGTG-----------------------------CTTCTG-------CTGGTGTGAAGGTGCAGGCAGGGCTCA---------------------CTCTCGGACCCGCCCCCAGAGGCCTCGG-------------------GGTCTGGAGATGAAGGAGAGGAGCGGACGGAGGCTCAGTGGC-CTGCTCTGCCCAGCGTGGGAGGGACGGAGCCTGGATGGGACTT----------TCTCGGGGCTCCCCTCCTACCCC-------------------------AGTCTCCCGAGAGGGCTTCTCCGCTG-----GCCTGA----------------------------CCCGCGCTGCTTCCGCTGTGGTCGGAGCCGGTGGCATT-GGAGTTGACATCCGAAGGTTGGCACAGGG-CAGGCACGCGGAGATTTGGGGGAGACAGATGTCTTAAGTATGGAGAGCCTGAGGGAGCAAGCGGGGAGGAAGCGAGGCGGGGAAGGA-GGGCACGCGGGAGAGGTCGGATCACACTGAGCCTTTGGGTCTCATGAGAAAGCCAAAGC---------------GGGGAGGAAGTGAGGCGGGGAAGGAGGGCACGC-GGGAGAGGTCGGATC--------ACACTGAG-CCTTTGGGTCTCATGAGAAAGCAAAGGAAGGGTTTCGG---------AAAAGA--GGGGCGGATGCACgtgagggcaggga----gaggaggcgGTCCCCACGTGTGTCCGGGAAAGGATTAGGATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46796265 1832 + 50890351 gga-------------------------------tgagaggatggggtgggaagggcg-ggaggccag-accgcagagTTGCTGAGTCGGCAGAGAGGAactgggcagctccctgtgtgccaggtgctgtcctgagtactc---gggtact----cagataacgcaggcgcagcactggtccctgcAGAGCTTCTGGAGTTGGGCAGGCCTTGAATGTCAGTCTAGGGA-CTTG---------GTCATTAGCCTTGGGGCTATGGGGAG-CTGTAGGAGGTTTCAGACGGACGGTCAGTTCCAGGGC-AGATAGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGGAG----GCAGGAACACAAGTTCAGG-GATGTCTGCAGATGTCAGCCTGTTGCCTGCTTTACTCT-----------------------------------------TCAACCcctccttcctgaccccctccagcctcgtcctccgcc-----------------------------------------tcctccAGCTGTAGGATCTGGGAGGCAGATGTCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCTTCCCAGCCTCATCCTCTGTCTCCCCCAGCTGTGGGACCTGAGAAGGGGTAGGGATTTAGATCCTCA--CACCCATGCCACTCCGTGTCCTCACAGTGATGGGACCGGTGGAGGCAGCGCCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCT-GGGGGCAG--GCGGAGACAGCCCCCTGTGACGCCCCTCATGCCCC--CTCCC------------------------------------TTCCCCA---------------------CGGGCCTTTCCCAGGGTCCTGCCACTGAGCC------CAA-----GCTCAGATCGAGGTTCACCTGCTGTAACGGagtggtgtgagtaagaaggaagtgtgttcttc-ctcg--------------------------------------------cgtatgagtctaagcgagca-ctcggggatggtgtggctgcttggctgcctgtaaggccccagctctttccatcttgttggtcagccacctgcctcacggtgcgaggggactgccccacgtccagccgtcgcctctgcattcccaccagca----------------aggcact--tc-ttttttttaagaaca-------------------tg------------------tcactg-----cagctcacattttacagac-----cagaactaattcccctggtcacacctagcggtaagggcggctgagaaatggagcctgtatgct-ggtgcccgtgtgccgggctacaagccagggcttcagttactagaggaagaag--gggacgtgggtgttagggccaaccagcagagtctgccTCCTGTCTCACCTGACACCCGCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCGAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGAGCAGAGAAG----------------GAGGGGTG-----------------------------CTTCTG-------CTGGTGTGAAGGTGCAGGCAGGGCTCA---------------------CTCTCGGACCCGCCCCCAGAGGCCTCGG-------------------GGTCTGGAGATGAAGGATAGGAGTGGACGGAGGCTCAGTGGC-CTGCTCTGCCCAGAGTGGGAGGGACGGAGCCTGGATGGGACTT----------TCTCAGGCCTCCCCTCGTACCCT-------------------------AGTCTCCTGAGAGGGTTTCCCCGCTG-----GCCTGA----------------------------CCCGCGCTGCTTCCCCTGTGGTCGGAGCCAATGGCATTGGGAGTTGACATCCGAAGGTTGACACAGGA-CAGGCACGTGGAGATTTGGGGGAGAGAGATGTCTTAAGTATGGAGAGTCTGA---------------------------------GA-GGGAAC-------------------------------------------------AAGT---------------GGGGAGGAAGTGAGGCGGGGAAGGAGGGGACGT-GGAAGAGGTGGGATC--------ACTCTGAG-CCTTTGGGTCTTATGAGAAAGCCAAGGAAGGGTTTTGG---------AAAAGA--GGGGCGGATACACGTGAGGGCAGGGA----GAGGAGGCGGTCCCCACGTGTGTCCGGGAAAGGATTAGGATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45369338 1679 + 49145316 ggagtggaatacaatgg-ggtat---------gatgagagggaggggtgggaagtgta--gaagctag-accgCAGAGTTGCTGAGtcagcagacaggaactggacagctccctgtatgccaggtgctcttctgggtactc---gggtgtgggtgtagaccatgcaggcacagcactggtccctgcagaacttccggtgttggggacaccatgactatcagtctgggaagcttggtcatgagtgtcatgagccttagggctgtgggaag-ccataggaggttcaa-------------ttccagggt-aga-ggggtcaagtctagactggtctggag-----------ggagagagatgggag----GCAGGGACACAAGATCAGG-GAC-TCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGACATCAGCCTGTCCCCCGGTTTACTCTTCAGCCCCCCCCTTCCTGACCCCCTCGAAACCTTGTCCTCCATCTCCCCCAGCTTTGGGACCCAGGATAGGGTAGGGATTTAGATCCTCA--CACT----CCGCTCTGTGTCCTCACAGTGATGGGGCCAGTGGAGGCAGCCCCTGAATACCGCGTCATTGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCT-GGGGGGAG--GCGGACGCAGCTCCGTGTGACA-CCCTCATGCCCA-TCTCCC------------------------------------TTCCCCA---------------------CTGGCCTTTCCCAGGGTCCTGCCCCTGAGCC------CAT-----GCTCAAATCCAGGTCCACCTGCTGtaac--agtggtttgaagaagaaggaagtttgttctcctctta--------------------------------------------tgtgtgagtctgagcgagca-cttgggggtggtgt--------------------ggccccagctctttccatcttgttgttcagccac-tggttcacggtgcaaggtggctgtcccacctccagccatcacctctgcatttccaccagca----------------agGCGCT--TC-TTATTCTTAAGAACG-------------------TG------------------TCACCACAGCTCAGCTCACATCTTACAGAG-----CAGAACAAATTCCCGTGGTCATAC-------------------------------------------------------------------------------GTAAAGGAAGAAG--GGGAAATGGGTGTTAGGG-CAACCAGCAGACTCTACCTCCTGTCTTACCCAAGA-CCGCC-----TGTCCTGTCCACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCGAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGCGCCAAGAAG----------------GCGGGGTGCTTGGGAAGAACTGTGGCTTCTTGCCCGACTTCTG-------CCGGTGTGAAGGGGCAGGTGGGGCTCA---------------------CTCTTGAACCTGCTCCCAGAGGCCTCGG-------------------GGTCTGGAGATGATGGA-AGGAGTGGACGGTGGCTTAGCGGC-CTGCTCTGCCCAGCGTGGGAGGGACAGAAGCTGGACGGGACTT----------CCTCAGGGCTCCCCTCCTGCCCC-------------------------GGTCTCCCAAGAGGGCTTCCCCTCTG-----GCCTGA----------------------------CCCGTGCTGCTCCCACTGTGGTTAgagccggcggcatt-ggagttgagatccaaaggttgacatggga-cgggcacgcggagatttgggggagagagacgtt-taagtgcagagagCCTGA---------------------------------GA-GGGAAC-------------------------------------------------AAGC---------------TGGGAGGGAGTGAGGTGGGGAAG--AGGGAAGT-GGAAGAGGTCGGATT--------GCGTTGGG-CCTCTGGGTCTTATGAGAGATCCAAGGAAGGGTTTAGG---------GAAAGA--GGGGCAGGTGCACGTGA-GGCAGGGA----GAGGAGGAGGTCCCCACACATGTCCAGGGAAAGATTAGGATG i calJac3.chr22 C 0 I 1201 s mm10.chr7 3632211 1622 + 145441459 GGAGTGAAATAGCCTTG-AGTGCCCGGTGGCGGCTGGGAGGATGGAGCAGAAAAGCAG-AAAGGATAATGCTGTAGAGCCAACGAGTCACCGGATCTCACTGAAGGGACTC---------------CTGTGCTGTGTGCACCAAGGTTGCAGGTGTGGGGAACGTGGAC---------------------CTCCATCTGTATGGGAGACCTTGAGTGCCAGTCTGAGGATCTTG---------CTCGCTAGCCTCAAGGCTTTGGGAAG-CTATAGGAAGGTTTA------------ATTTTGGAGCAAGATGAGGTCAAGACCAGATTGACCCAGAGGATAGACTGCAGGAGAAAGATGAGAA----GCAGGAGTAAGGCTCCTGGAGAGGAATATAAGCCTCAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATTCTTCAGCCCTT-ATGTAGC---CCCCTCAG-CCCCTCCTTTCTGA-TTCCATCCAGCCTCCACCTCAGT---CCCCAGCTTCGTTCCT------------------------CCCC--CATCCATAT--CCCTTCTTCTTTGTAGTGATGGGACCAGTGGAGGCAGCTCCTGAGTACCGAGTCATTGTGGATGCCAACAACCTGACTGTGGAGATAGAAAATGAGCTGAGTGAGTGAT-GGGAAGGGCTATGGAGACACCAGTATCCTGTGCTCTTCACTCTTT--CGTTA------------------------------------TGACCCAAAGGGAAGAACAGGCATGAACCTGGACCTCTTTTGTTTGCCTTTCTTGGGCA------AAAATATTGCCCTGATT-AGGTTCATCTTCTATAACAGAGTAACTAACATA------AATTGTACTCTCCTCCAT--------------------------------------------CATAAAAGTCTGAATAAGCAGGGCAGGTCTCGAGTCATCCTTTGACCCCCT-TGAGCAGCCAGGCTTTGCCACCTCGT---------ACGTGCTCCAGGATG--------ATGCC--------------CACCTCTGCATCCCTACCAGCAAATGTGGAGGGAAGATAGGCCATAGTT-GTTTCCTTAAGGCCACGATCTGGAAGTTGAAAATTG------------------TCACTT----TCAGTTCATATTTTGTAGACTTTTGTAGAACAAACTCCCAC--CTGCACATAGCATTGGAGACAGCTAGGAAATTAGAATGATTTGGG-GTTG-------------------------------GTTACTAGA----GAGG--TGGAAGTAGGTATTGGGGATAG-CAGCAGAGTCTGCCTCCC-CCTCAGTAGACACCTGTCCTTGATGTCCCATT-----TAGACATTATCCACAAGTTCATCCGGGATAAATACTCAAAGAGATTCCCTGAGCTAGAATCCTTGGTGCCCAATGCTCTGGATTACATCCGCACAGTCAAGGTGAGTGGAGAGAAG----------------TCTGG--------------------------------CTT--------------------GGGAAGAACTGGGGCCA---------------------CT---AGACCAT------GAAACCTCA--------------------AGTCTAGAAATAATGGAGAGTCATGAATGG-GGCTCAGTGGT-------------------GAGGGACAGATACTGGAATGGATGTGTCATGCACATCTCTTGCTTCCTTCCTCCCCTT-------------------------GGTTTCATGGGAGGA--TAACCACTG-----ACCTGG----------------------------CCCTTAC--CTCTGGCTGCAGTTGGAGCAGGTGTCCTT-TGAGCTGGCA----GAGGCCACCGCTGAA-----------------------------------TAAGAGCTAAGACCCTGC---------------------------------GT-GGGAAC-------------------------------------------------AAGC---------------AAGGATGAAGTCAGAAGGGGCAGGGAGGGAAGCTTGGAGAGGTCAGAAA--------GGGCAGAGAACATTAGATGT---------------GGAAGGTGTTGGCTTCTCTACAAGGGATTGGAGCGAGTGGAAGTGA-------AA----GAGCAGGGG--TCCTGCCTCTGTCCAGGA---GATCAGGATG i mm10.chr7 I 1141 C 0 s canFam3.chr1 19591870 1835 - 122678785 ggtgtgtgataagatggtggtgt---------cttgaaaaagtggggcttggacggtgcaaaggccag-actgtggagTTGGAGAGtcagcaggtacctacagagcagtgccc-gtgcgccaggcactattgtgggcatct---gggcactgg------------gggtgcagAACTTGTCTTCATAGTGTTTC------------------------CCGTCTGGGGAGCTTG---------CACCTCGGCCTCAGTGGTGTGGGGATCCCCTAAGGGGTT--------------AGTTCCGGGGCGACACGCCGTGGTGTCTAGACTGGCCTGGAG-----------AGAGAGAAATGGGAGGTGTGCCAGCGTGGAAACCCTGG-AAAACCTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAC---------C-TCCAGGTTTTCTTATTAG------CCTCCCAGC-TCCCTTCCAACTACACCTCCTGACTCCCCTGGCTGTGGGAGCC-----------------TAGACACTCACCCACCAAGGCTGCTTCTCATCTTCACAGTGATGGGACCTGTTGAGGCGGCCCCTGAATACCGAGTCATCGTGGATGCTAACAACCTGACCGTGGAGATCGAGAATGAGCTGAGTGAGTGGC--AGGAAGG--GCAGAGATGGCCCTGCCTGCTGTCCCTTCCACTCT-CCTCCCATCCACAAGGAGAGGACAGGCAGGACCCTGGTTACTTTCCCCA---------------------CTGGCCTTCCCCAAGATCCTGCCCCAGACTCCTCATACTA-----GCTGTAGTCCAGATTCAGCTGCCataac--agcagcttaaa-aaaaagaaagtgtgcttttctccga--------------------------------------------tgtgagaatctggatgaggagtccagccctggagt------------------------caggctctttctgtc---ttgacctgccacctgtgtcagggcacaaagtgactgtc-cacctccagtcatcacctccacatccccaccagcagaacagggaagaaaa-agagggc--ac-agttctttaaggggg-------------------tgacctggaaattgcatgcatcactt-----catatgatatcctgtagac-----cagaactaacttgcagggccacacctggcagcaggggagt-----------agcgtttttgctgggtacccacgaacccagcta-aattcaggggttcatttatttaa-aaagaagcagggagatgggtgttgcggacagccagtggagtctgccTGCCCCCTTATCAG----CTACC-----TGTTCTCCCTACCTTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCAAAGCGCTTCCCTGAACTGGAGTCTCTGGTCCCTAATGCACTGGATTACATCCGCACGGTCAAGGTGAGTGGACAGAGGTGGGGACTCAGGAACAGTGGAGTT-----------------------------CTCTTGACTACCCCTCATGTGAAGGGG--AGCAGGGAGCAGGTGAATGACCTGGAATGTGGTTAGTGAGGCTGCTCC---AGGCCTCAGCTGCCTTTCTCGTTATTGAGGCCTGCAGATACTGGCAGGGGCCGAGTGGTGGCTCAGCTGCTCCAGGCTCCCCAGCAAGAAAGGGATGAAGCCTGGAAAGGATGT----------TCTCATGGCTCCTCTGCCACCCATCCAATCCTGCTGCTTCCTTGGATGGGTCTCCCAGGAAGGGCTGGGAGCTGCTTGAGGCTGAGGGAGTAAGGAGGGAGATGAGGGGGTCTCTCATGC--CACCAACAGTGGTtggagcaggtggcatt--gagtcgatatctaaaggttgatgcaggggcagccatgcagagatatgggggggaaagcCT---GGAGTACCAAGAACGGGA---------------------------------GATAATGAC-------------------------------------------------AAGCTGTGGTATGTTCAGAAGGGAGGAAGTGAG-----------GGCAAAGT-CAATGAGGTTGCATCCCCTGTGACCCCCAAG-GCTTTGGGCCTTCTGGAAAAGCC------------------------ATGAGA--GGGCCAGATACTAGTGAGAGTGGGGACACCGGTGAGGAGATTCCTGTGTGCTGTCAGGAGGAGGTGAGGATG i canFam3.chr1 C 0 C 0 a score=34799.000000 s hg38.chr19_GL949747v2_alt 97608 9 + 729520 GCGGTGGGG s panTro4.chr19 59031117 9 + 63644993 GCGGTGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909220 9 + 60714840 GCGGTGGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102672420 9 - 106955855 GCGGTGGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59956595 9 + 64156825 GTGGTGGGG i rheMac3.chr19 C 0 I 1 s macFas5.chr19 54960442 9 + 59248254 GTGGTGGGG i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47090310 9 + 51301725 GTGGTGGGG i papAnu2.chr19 C 0 I 309 s chlSab2.chr6 46798097 9 + 50890351 GTGGTGGGG i chlSab2.chr6 C 0 I 78 s calJac3.chr22 45372218 9 + 49145316 GTGGTGGGG i calJac3.chr22 I 1201 I 1 s mm10.chr7 3633833 9 + 145441459 GTGGCACAG i mm10.chr7 C 0 C 0 s canFam3.chr1 19593705 9 - 122678785 GTGCAGGGG i canFam3.chr1 C 0 C 0 a score=294018.000000 s hg38.chr19_GL949747v2_alt 97617 142 + 729520 AAGCCCCTGCAGGGA--AGCGAGGCCG-CGGATTTGCA-CTCCGACTTGACGCAGGCCAGAGGCTTGTGAGGCCACA-GTCTTTC-CAGACGCCACTCTGCCCGGGCTCCGTTTCCAGGTCAGCGAAAGCAGGGCAGATGGTGTGGAT s panTro4.chr19 59031126 142 + 63644993 AAGCCCCTGCAGGGA--AGCGAGGCCG-CGGATTTGCA-CTCCGACTTGATGCGGGCCAGGGGCTTGTGAGGCCATG-GTCTTTC-CAGACGCCACTCTGCCCGGGCTCCATTTCCAGGTCAGCGAAAGCAGGGCAGATGGTGTGGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909229 143 + 60714840 AAGCCCCTGCAGGGA--AGCGAGGCTG-AGGATTCACGCCTCCGACTTGATGCGGGCCAGAGGCTTGTGAGGCCGCG-GTCTTTC-CAGATGCCGCTCTGCCCAGGCTCCGTTTCAGGGTCAGCGAAAGCAGGGCAGATGGTGTGGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102672429 142 - 106955855 AAGCCCCTGCAGGGA--AGCGAGGCCG-CGGATTTGCC-CTCCGACTTGACGCGGGCCAGAGGCTTGTGAGGCCGCG-GTCTTTC-CAGACGCCGCTCTGCCCGGGCTCCGTATCCGGGTCATTGAAAGCAGGGCAGACAGTGTGGAT i nomLeu3.chr10 C 0 I 297 s rheMac3.chr19 59956605 121 + 64156825 AAGCCCCCGCAGGGA--AGCGAGGCCG-CGGGTTTGTG-CTCCGACTCGACACAGG-CAGAGGCTTGTGAGGCCGCG-GTCTTCC-CAGACGCTGCTCTGCCCAGGTTCCGTTTCC---------AAAGCAGAGCAG----------- i rheMac3.chr19 I 1 C 0 s macFas5.chr19 54960452 121 + 59248254 AAGCCCCCGCAGGGA--AGCGAGGCCG-CGGGTTTGTG-CTCCGACTTGACACAGG-CAGAGGCTTGTGAGGCCGCG-GTCTTCC-CAGACGCTGCTCTGCCCAGGTTCCGTTTCC---------AAAGCAGAGCAG----------- i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47090628 121 + 51301725 AAGACCCTGCAGGGA--AGCGAGGCCG-CGGGTTTGTG-CTCCGACTTGACACAGG-CAGAGGCTTGTGAGGCCGCA-GTCTTCC-CAGACGCTGCTCTGCCCAGGTTCCGCTTCC---------AAAGCAGAGCAG----------- i papAnu2.chr19 I 309 C 0 s chlSab2.chr6 46798184 121 + 50890351 AAACCCCTGCAGGGA--AGCGAGTCTG-CGGGTTTGTG-CTCCGACTTGACACAGG-CAGAGGCTTGTGAGGCCGCG-GTCTTCC-CAGATGCTGCTCTGCCCAGGTTCCGTTTCC---------AAAGCAGAGCAG----------- i chlSab2.chr6 I 78 C 0 s calJac3.chr22 45372228 132 + 49145316 AAGCCCCTGCAGGGA--AGTGAGGCCACCGGATCAGTG-CTCCCACTTGTCATGGGCCAGAGGCTTGTGAGGCCTCG-GTC-TCC-CAGATGCCACTGTGCCCAGGCTCCATTTCCAGGTCAGCCAAAGCAGAGCAGA---------- i calJac3.chr22 I 1 C 0 s mm10.chr7 3633842 120 + 145441459 -------------GA--ATTGTGTCTG-TGGAATAAAG-TGCGCTTTTGAC---GGCC-----TCTTTAGTGCAGCATGTCTTCCTTGGAGGCTGCTTTG-CCAGCTTGTACTTCTGCATCCGT-AGAGCAGAGCAGGCACACTGAT- i mm10.chr7 C 0 C 0 s canFam3.chr1 19593714 109 - 122678785 GCATCCATGCAGGAAGCAGTGTGGTCA-AAG--TTGCA-TTTTGAGTTGCTGCAGA-CAGTGG---------------GTCTGCC-T-----------------GGTTCTGGTTCTAGACCAGC-AGTGCAGGAGCAACGGTACCGAT i canFam3.chr1 C 0 C 0 a score=1096583.000000 s hg38.chr19_GL949747v2_alt 97759 325 + 729520 GCTTGACGTGGTGGAGGCAGGAATGGTGTGGATGCTTCAGGCGGTGGAGGCAGGAG-AGGCCCCCAGTGCAGAG---------------ACCCTGACTGTCCCAGTGTCCCTAAGAAGAGACCTGAGGAGGTGCTG-AGCAAGAGAGGTTC-TCGAGCCTTCCT--GAGTTCCCGAGCCTCCCCTATCTTCTCTGCTCGCCCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAATGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT--------------------------------------TCGAGGGAGGC-----GCCGGGCC----C-T s panTro4.chr19 59031268 325 + 63644993 GCTTGAGGCGGTGGAGGCAGGAATGGTGTGGATGCTTCAGGCGGTGGAGGCAGGAG-AGGCCCCCAGTGCAGAG---------------ACCCTGACTGTCCCAGTGTCCCCAAGAAGAGACCTGAGGAGGTGCTG-AGCAAGAGAGGTTC-TCGAGCCTTCCT--GAGTTCCCGAGCCTCCCCTATCTTCTCTGCTCGCCCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAATGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT--------------------------------------GCGAGGGAGGC-----GCCGGGCC----C-T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909372 329 + 60714840 GCTTGAGGCGGTGGAGGCAGGAACGGTGTGGATGCTTGAGGTGGTGGAGGCAGGAG-AGGTCCCCAGTGCAGAG---------------ACCCTGACTGTCCCAGTGTCGCCAAGAAGAGACCCGAGGAGGTGCTG-AGCAAGAGAGGTTC-TCGAGCCTTCCT--GAGTTCCCAAGCCTCCCCTGTCTTCTCTGCTCGCCCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAATGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT--------------------------------------GTGAGGGAGGC-----GCCGGGCCCGGGC-T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102672868 328 - 106955855 GCGTGAGGCGGTGGAGGCAGGAACCGTGTGGACGCTTGGGGCGGTGGAGGCAGGAG-AGGCCCCCAGTGCAGAG---------------ACCCTGACTGTCCCAGTGTCCCCAAGAAGAGACCTGAGGAGGTGCTG-AGCAAGAGAGGTTC-TCCAGCCTCCCT--GAGTCCCCGAGCCTCCCC-GTCTTCTCTGCTCACCCCTAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAATGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCACT--------------------------------------GCGAGGGAGGT-----GCCGGGCCCGGGC-T i nomLeu3.chr10 I 297 C 0 s rheMac3.chr19 59956726 304 + 64156825 ----------------------ACGATGTGGATGCTTCAGGCGGTGGAGGCAGGAG-AGGCCCCCAGTGTAGAG---------------ACCCTGACTTTCCCAGTGTCCCCGAGAAGAGACCCGAGTAGGTGCAG-GGCCAGAGAGGCTC-TGAAGCCTTCCT--GAGTTCCTGAGCCTCCC--GTCTTCTCTGCTCGCGCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAACGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT---------------------------------------GGAGGGAGGC-----GCCGGGCCCGGGC-C i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54960573 306 + 59248254 ----------------------ACGGTGCGGATGCTTCAGGCGGTGGAGGCAGGAG-AGGCCCCCAGTGTAGAG---------------ACCCTGACTTTCCCAGTGTCCCCGAGAAGAGACCCGAGTAGGTGCAG-AGCCAGAGAGGCTC-TCAAGCCTTCCT--GAGTTCCTGAGCCTCCCCTGTCTTCTCTGCTCGCGCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAACGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT---------------------------------------GGAGGGAGGC-----GCTGGGCCCGGGC-C i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47090749 307 + 51301725 ----------------------ACGGTGTGGATGCTTCAGGcggtggaggcaggag-aggccCCCAGTGTGGAG---------------ACCCTGACTTTCCCAGTGTCCCCGAGAAGAGACCTGAGTAGGTGCAG-AGCCAGAGAGGTTC-TCAAGCCTTCCT--GAGTTCCTGAGCCTCCCCTGTCTTCTCTGCTCGCGCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAACGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT--------------------------------------GGGAGGGAGGC-----GCCGGGCCCAGGC-C i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46798305 306 + 50890351 ----------------------ACAGTGTGGTTGCTTCAGGCAGTGGAGGCAGGAG-AGGCCCCCAGTGTAGAG---------------ACCCTGACTTTCCCAGTGTCCCCAAGAAGAGACCCGAGTAGGTGCAG-AGCCAGAGAGGTTC-TCAAGCCTTCCT--GAGTTCCTGAGCCTCCCCTGTCTTCTCTGCTCGCCCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAATGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT---------------------------------------GGAGGGAGGC-----GCCGGGCCCGGGC-C i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45372360 314 + 49145316 -----------------------GAGTGTGGATGCTTCGGGTGGCAGAGGCAGGAG-AGGCCCCCAGTGCAGAGACCCTCAGTGTAGACACCCTGACTTTCCCAGTGTCCCCAAGACAAGACCTGAATAGGTGCTG-AGCA--AGAGGTTC-TCCAGCCCTCCT--GAG--CCCAAGCCTCCCT-GTC-TCTCTGCTCGCCCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAATGCCACCATCATGGTCGTCAGTGTCACTGCCTCCACCACTCAGGGGTATGTCCGCT--------------------------------------GCGAGGGAGG------ACTGGGCCCGGGC-T i calJac3.chr22 C 0 C 0 s mm10.chr7 3633962 348 + 145441459 ---------GCTTTAGGCAGGGAGGTTGTAAA-------AGTGTAAAAGGAAAGAG-AGGCCTCCAGTGTATGG---------------ACCTTAGCTTTCCCAGCTTCCTCAAGGGGAGACCTCTGTTGGTGTTGTAGCAAAAGAGGGTCTTTTGGGCTTACTACAAATTCTC---CCTCCCCTTCCTAC----------CCCAGGAGCTGGGCAACAGCCTGGATAAGTGCAAGAACAATGAGAACCTCCAGCAGATCCTGACCAATGCTACTATCATGGTTGTTAGTGTCACTGCCTCTACTACCCAGGGGTATGTATGCCAAACGGTAATGTGCCGCAAGCCTACCATAGGACAATTAACAGGAGAGACAGAATGGAGGGCATGGTCAG i mm10.chr7 C 0 C 0 s canFam3.chr1 19593823 289 - 122678785 ------------------------GTTCTGAGTGGTGAAGTCCTGGGAGCTGGGAGCAGGCAGCCTTCATCCAG---------------ACCCCAGATGTCCCC---------AGAAGAGACTTAACTAGGTGCAGGGGCAAGAGAGCTCC-TCAGGCCTTCCT--GAATCCCTGTGCCTCCCC-CTCTTGCCTTCTCACCTCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAATAACGAAAACCTACAGCAGATCCTAACCAACGCCACCATCATGGTCGTCAGCGTGACTGCCTCCACCACCCAGGGGTGCGTGCATA------------------------------------------GGGTGGG-----ACCATGCACT----- i canFam3.chr1 C 0 I 1393 a score=114000.000000 s hg38.chr19_GL949747v2_alt 98084 43 + 729520 AATGG----GATTGGGGATTA-GGCTGGAGCTACACACGCAGGTGTac s panTro4.chr19 59031593 43 + 63644993 AATGG----GACTGGGGATTA-GGCTGGAGCTacacacacaggtgtac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909701 43 + 60714840 AATGG----GACTGGGGATTA-GGCTGGAGCTACATATGCAGGTGTGc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102673196 43 - 106955855 AATGG----GACTGGGAATTA-GGCTGGAGCTACACACGCAGGTGTGc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957030 43 + 64156825 AGTGG----GACTGGGGATTA-GGCTGAAGCTACCCACGCAGGTGGGc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54960879 43 + 59248254 AGTGG----GACTGGGGATTA-GGCTGAAGCTACCCACGCAGGTGGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091056 43 + 51301725 AGTGG----GACTGGGGATTA-GGCTGAAGCTACCCACGCAGGTgggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46798611 43 + 50890351 AGTGG----GACTGGGGATTA-GGCTGAAGCTACCCACGCAGGTGGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45372674 40 + 49145316 AGGGG----GACTGCGGATTA---TTGAAG-TACACATGCAGATGTGC i calJac3.chr22 C 0 C 0 s mm10.chr7 3634310 41 + 145441459 AGTGGTGCTGACTGAGAATTATGGCC-------CCTAGACAGATGGAA i mm10.chr7 C 0 C 0 e canFam3.chr1 19594112 1393 - 122678785 I a score=91431.000000 s hg38.chr19_GL949747v2_alt 98127 67 + 729520 acac----gcacacaca------------------------------------catacaca------catgcaca----caca----------cacacaGAACCGAGAGGGC---TGGGGCT---GGGCACAC s panTro4.chr19 59031636 61 + 63644993 acac----gcacacaca------------------------------------catacaca------catgcaca----caca----------------GAACTGAGAGGGT---TGGGGCT---GGGCACAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909744 77 + 60714840 acat----gcacgcaca------------------------------------cacacacg------cacacaca----cacacacacacacacacacaGAACTGAGAGGGT---TGGGGCT---GGGCACAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102673239 57 - 106955855 acac----gcacacaca------------------------------------catacaca----------cgca----caca----------------GAACTGAGAGGGT---GGGGGCT---GGGCACAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957073 69 + 64156825 atac----acacacacg------------------------------------cacacaca------cacacacatgcgcaca----------cacacaGAACTGAGAGGGT---GGGTGCT---GGGCAC-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54960922 75 + 59248254 ATac----acacacacgcgca------------------------------cacacacaca------cacacacacgcgcaca----------cacacaGAACTGAGAGGGT---GGGTGCT---GGGCAC-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091099 49 + 51301725 atat----gcacacaca--------------------------------------------------------------caca----------cacacagaactgagagggt---gggggct---gggcac-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46798654 65 + 50890351 ATAT----Gcacacaca------------------------------------cacacgca------cacacaca----taca----------cacacaGAACTGAGAGGGT---GGGGACT---GGGCAC-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45372714 108 + 49145316 ACAC----ACACACACACATATGAGAGGGCGGGACTGGGGATTACTGAAGCTacacacgcagatgtgcacacaca----caca----------cacacataACTGAGAGGGC----GGGACT---GGGGATAC i calJac3.chr22 C 0 I 1444 s mm10.chr7 3634351 72 + 145441459 TTTTTATGATAGTCCCA------------------------------------GAACTAAA------CAAACACA----CATA----------CATACACAGCTGAGACAGTAGATGGGGCT---GACCAC-- i mm10.chr7 C 0 I 41 s canFam3.chr1 19595505 58 - 122678785 ACGT----GCACATATG------------------------------------TGTACAGA------CGTGCACA----CACC------------------GCTAGGAGGAC---ACGGGCTCTCATGC---- i canFam3.chr1 I 1393 C 0 a score=456944.000000 s hg38.chr19_GL949747v2_alt 98194 149 + 729520 CAGGCAGGCG-----------------------------------------------------------------------GGAGATC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCACCCGCCCC----TGCAGGCAGCAGCTGTCggaggaggagctggagcggctggaggaggcctgcgacatggcgctggagctgAACGCCTCCAAGCACCGCATCTACGAGTATGTGGAGTCC s panTro4.chr19 59031697 149 + 63644993 CAGGCAGGCG-----------------------------------------------------------------------GGAGACC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCATCCGCCCC----TGCAGGCAGCAGCTGTCGGAGGAGGAGCTGGAGCGGCTGGAGGAGGCCTGTGACATGGCGCTGGAGCTGAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909821 115 + 60714840 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCCCC----TGCAGGCAGCAGCTGTCGGAGGAGGAGCTGGAGCGGCTGGAGGAAGCCTGCGACATGGCGCTGGAGCTGAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102673296 149 - 106955855 CAGGCAGGCG-----------------------------------------------------------------------GGAGACC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCACCTGCCCC----TGCAGGCAGCAGCTGTCGGAGGAGGAGCTGGAGCGGCTGGAGGAGGCCTGCGACATGGCGCTGGAGCTGAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957142 149 + 64156825 CAAGCAGGCG-----------------------------------------------------------------------GGAGACC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCACCCGCCCC----TGCAGGCAGCAGCTGTCGGAGGAGGAGCTGGAGCGGCTGGAGGAGGCCTGTGACATGGCGCTGGAGCTGAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54960997 149 + 59248254 CAAGCAGGCG-----------------------------------------------------------------------GGAGACC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCACCCGCCCC----TGCAGGCAGCAGCTGTCggaggaggagctggagcggctggaggaggcctgtgacatggcgctggagctgAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091148 149 + 51301725 CAGGCAGGCG-----------------------------------------------------------------------GGAGACC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCACCCGCCCC----TGCAGGCAGCAGCTGTCGGAGGAGGAGCTGGAGCGGCTGGAGGAGGCCTGTGACATGGCGCTGGAGCTGAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46798719 149 + 50890351 CAGGCAGGCG-----------------------------------------------------------------------GGAGACC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCACCTGCCCC----TGCAGGCAGCAGCTGTCggaggaggagctggagcggctggaggaggcctgtgacatggcgctggagctgAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i chlSab2.chr6 C 0 C 0 s mm10.chr7 3634464 331 + 145441459 tgggtaggagcaccgactgctcttctaaaggtcctgagttcaaatcccagcaaccacatggtggctcacaaccatctgtaaggagatctgatgccctcttctggagtgtctgaagacagctacagtgtatttacatataataaataaatacatcttttaaaaaaaagaaaGAAATGTACCTAGCAAAGCTGGAGTCT-GCCCACAACCCTCACGTGCTCCACAATGTAGGCAGCAGCTGTCGGATGAGGAGCTAGAGCGGCTAGAGGAGGCCTGTGACATGGCACTGGAGCTGAATGCCTCCAAACACCGCATCTATGAGTATGTGGAGTCC i mm10.chr7 I 41 C 0 s canFam3.chr1 19595563 166 - 122678785 TGGTCAAGTG-----------------------------------------------------------------------GGATCCC------------CAGGAGGG-------------------------------------------------------------------------------GCAGGGGTCCAACCCAGTCACATCATTAACCAC----TGCAGGCAACAGCTGTCAGAGGAGGAGCTAGAGCGGCTGGAGGAGGCCTGTGACATGGCACTAGAGTTGAACGCCTCTAAGCACCGCATCTACGAATATGTGGAGTCT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45372822 1444 + 49145316 I a score=748965.000000 s hg38.chr19_GL949747v2_alt 98343 209 + 729520 CGGATGTCCTTCATCGCACCCAACCTGTCCATCATTATCGGGGCATCCACGGCCGCCAAGATCATGGGTGAGTCCCC-GGGCTGGGTCCCATGGAG---CG--------GGGG--TCTGCTGACACTGTGACCTTGGGAAAGCTACAT-CCTTTTCTGTAGAATGGGGGCTT-TGGCACCTGGACCTCAGCACCCCGTCTC-CCTGGACATCACAGAGGTCAGCCA s panTro4.chr19 59031846 209 + 63644993 CGGATGTCCTTCATCGCACCCAACCTGTCCATCATTATCGGGGCATCCACGGCCGCCAAGATCATGGGTGAGTCCCC-GGGCTGGGTCCCATGGAG---CG--------GGGG--TCTGCTGACACTGTGACCTTGGGAAGGCTACAT-CCTTTTCTGTAGAATGGGGGCTT-TGGCACCTGGACCTCAGCACCCCGTCTG-CCTGGACATCACAGAGGTCAGCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909936 208 + 60714840 CGGATGTCCTTCATCGCGCCCAACCTGTCCATCATTATCGGGGCATCCACGGCCGCCAAGATCATGGGTGAGGCCCC-GGGCTGGGTCCCAAGGAG---CG--------GGGC--TCTGCTGACACTGTGACCTTGGGGAAGCTGCAT-CCTTTTCTGTAGAATGGGGGCTT-TGGCACCTGGG-CTCGGCACCCCGTCTC-CCTGGACGTCACAGAGGTCAGCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102673445 207 - 106955855 CGGATGTCCTTCATCGCGCCCAACCTGTCCATCATTATCGGGGCATCCACGGCCGCCAAGATCATGGGTGAGGCCCT-GGGCTGGGTCCCATGGAG---CG--------GGG---TCTGCTGA-ACTGTGACCCCGGGGAAGCTGCAT-CCTTTTCCGTAGAATGGGGGCTT-TGGCACCTGGGCCTCTGCACCTTGTCTC-CCTGGACATCACAGAGGTCAGCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957291 210 + 64156825 CGGATGTCCTTCATCGCGCCCAACCTCTCCATCATTATCGGGGCGTCCACGGCCGCCAAGATCATGGGTGAGGCCCT-GGGCTGGGTCCCATGGAG---CG--------GGAC--TCTGCTGACACTGTGATCTTGGGGAAGCTGCTTCCCTTTTCTGTAGAATGGGGACTT-TGGCACCTGGGCCTCAGCACCCCGTCTC-CCTGGACGTGACAGAGGTCAGCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54961146 210 + 59248254 CGGATGTCCTTCATCGCGCCCAACCTCTCCATCATTATCGGGGCGTCCACGGCCGCCAAGATCATGGGTGAGGCCCT-GGGCTGGGTCCCATGGAG---CG--------AGGC--TCTGCTGACACTGTGATCTGGGGGAAGCTGCTTCCCTTTTCTGTAGAATGGGGACTT-TGGCACCTGGGCCTCAGCACCCCGTCTC-CCTGGACATGACAGAGGTCAGCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091297 210 + 51301725 CGGATGTCCTTCATCGCGCCCAACCTCTCCATCATCATTGGGGCGTCCACGGCCGCCAAGATCATGGGTGAGGCCCC-GGGCTGGGTCCCGTGGAG---CG--------AGGC--TCTGCTGACACTGTGATCTGGGGGAAGCTGCTTCCCTTTTCTATAGAATGGGGACTT-TGGCACCTGGGCCTCAGCACCCCATCTC-CCTGGACATCACAGAGGTcagcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46798868 210 + 50890351 CGGATGTCCTTCATCGCGCCCAACCTCTCCATCATTATCGGGGCATCCACGGCCGCCAAGATCATGGGTGAGGCCCC-GGGCTGGGTCCCGTGGAG---TG--------GGGC--TCTGCTGACACTGTGATCTGGGGGAAGCTGCATCCCTTTTCTGTAGAATGGGGACTT-TGGCACCTGGGCCTCAGCACCCCGTCTC-CCTGGACATCACAGAGGTCAGCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45374266 219 + 49145316 CGAATCTCCTTCATATCGCCCAACCTGTCCATCATCATCGGGGCATCCAGGGCTGCCAAGATCATGGGTGAGGCCCCGGGGCTGGGTCCCATGGCG---GGGATGGGGAGGCG--TCTGCTGACACTGTGGCCTTGGGAAAGCTGCATCCCTTTTCTTTGGAGGGGGGGCTT-TGGCACCTAGGCCTCAGCACCTGGTCTC-CCTGGACATCACAGAGGTCAGCCA i calJac3.chr22 I 1444 C 0 s mm10.chr7 3634795 174 + 145441459 CGGATGTCCTTCATTGCACCCAACTTGTCCATCATCATTGGAGCATCCACAGCTGCCAAGATCATGGGTGAGGTCCC--AGCGGGGTCCCTTTGGC---AG--------AG----TCTGCTGATA----------GGTTAGGTTGCCT----------TGGAAAGTGGGGTT-TGGCCTATTG-----------TGTTGTC-CCCTGAAGT--CAGAGGTCAGCCA i mm10.chr7 C 0 C 0 s canFam3.chr1 19595729 213 - 122678785 CGGATGTCCTTCATCGCGCCCAACCTCTCCATCATCATTGGGGCATCCACAGCCGCTAAGATCATGGGTGAGGCCCT-G----GGGTGCGGTAGAGATATG--------GGGCCATCCTCGGACAGTGTGACCTTGAGGAAGCCACGTCCCTCCTCTACGGGACAGGACCCTACTCCCCCTCACCCTCATCCTGTCATCCCTCCTAGAGATCACAGAAGTCACCCA i canFam3.chr1 C 0 I 1193 a score=48845.000000 s hg38.chr19_GL949747v2_alt 98552 10 + 729520 GCCTGGCACA s panTro4.chr19 59032055 10 + 63644993 GCCTGGCACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55910144 10 + 60714840 GCCTGGCACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102673652 10 - 106955855 GCCTGGCACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957501 10 + 64156825 GCCTGGCACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54961356 10 + 59248254 GCCTGGCACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091507 10 + 51301725 gcctggccca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46799078 10 + 50890351 GCCTGGCACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45374485 10 + 49145316 GCCTGGCACA i calJac3.chr22 C 0 C 0 s mm10.chr7 3634969 10 + 145441459 GTTTGGCACA i mm10.chr7 C 0 I 1203 s canFam3.chr1 19597135 10 - 122678785 GCCTGGCACA i canFam3.chr1 I 1193 C 0 a score=1206783.000000 s hg38.chr19_GL949747v2_alt 98562 410 + 729520 CAGCAAAGCCTCGTCTGTGGGAAaaacactcacccacagctccttct-ccctcccctgtgc---------------cggaaacccagagatga-ccacacccaggccctgttgtcagggagctcctggtttggtgaaAATGGTTCCAAAACACAGCCATCCCTGGAACGGCGTTAGTGTGGCT----TAGCACAAACGTGGTGGTCAGCTTCCTGTTGGG-GGCCTCCTCCCTG--CACCCCCAGGCCAGCTGCCCTCCCTCTCTGAGCCTCCTTTGCATCTGCCCCTTGCGGAATGGGCCAGGTCG---CCCGCCTGGCAGGG-CCATCGAGGAATCCAACCAGAACTTCATGTAAAGGTGCCCAGCACACGTCGAGCCCCCAGGCAGATTTACTCACCCCCACCT-CTCTGCTTTCTTCTGAccgcccc----cccttcct s panTro4.chr19 59032065 403 + 63644993 CAGTAAAGCCTCGTCTGTGGGAAAAACACTCCCCCACagctccttct-ccctcccctgtgc---------------cggaaacccagagatga-ccacacctaggccctgttgtcagggagctcctggtttggtgaaAATGGTTCCAAAACACAGACATCCCTGGAACGGCGTTAGTGTGGCT----TAGCACAAACGTGGTGGTCAGCTTCCTGTTGGG-GGCCTCCTCCCTG--CACCCCCAGGCC-------CTCCCTCTCTGAGCCTCCTTTGCATCTGCCCCTCACGGAATGGGCCAGGTCG---CCCGCCTGGCAGGG-CCATCGAGGAATCCAACCAGAACTTCATGTAAAGGTGCCCGGCACACGTCGAGCCCCCAGGCAGATTCACGCACccccacct-ccctgctttcttctgaccgcccc----cccttcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55910154 413 + 60714840 CAGCCAAGCCTTGTCTGTGGG-AAAGCACTCACCCACAGCCCCTTCT-CCCTCCCCTGTGC---------------TGGAAACCCAGAGAGGA-CCACACCCGGGCCCTGTTGTCAGAGAGCGCCTGGTTTGATGAAAATGGTTCCAAAACACAGACATCCCTGGAACAGGGGTAGTGTGGCT----TAGCACAAATGTGGTGATCAGCTTCCTGTTGAG-GGCCTCCTCCCTG--CACCCCCAGGGCAGCTGCCCTCCCTCTCTGAGCCTCCTTTGCATCTGCCCCTCGTGGAATGGGCCAGGTCG---CCCACCTGGCAGGG-CCACCGAGGAATCCAACCAGAACCTCATGTAAAGGTGCCTGGCACACGTCGAGCCCCCAGGCAGATTCACGCACccccacct-ccctgctttcttctgaccgcccctgctcccttcct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102673662 414 - 106955855 CAGCGAAGCCTTGTCTGTGGGAAAAACACTCACCCACAGCTCCTCCT-CCCTCCCCTGTGC---------------CGGAAACCCAGAGATGA-CCACACGCAGGCGCTGTTGTCAGGGAGCTCCTGGTTTGGTGAAAATGGTTCCAAAACACAGACATCCCTGGAACGCCATTCGTGTGGCT----TAGCACAAACGTGGTGGTCAGCTTCCTGTTGGA-GGCCTCCTCCCTG--CACCCCCAGGCCAGCTGCCCTCCCTCTCTGAGCCTCCTTTGCATCTGCCCCTCGCGAAATGGGCCAGGTCG---CCCGCCTGGCAGGG-CCACCGAGGAATCCAGCCAGAACCTCACGTAAAGGTGCCCAGCACACGTCGAGCCCCCAGGCAGATTCACGCACCCCCACCT-CCCTGCTTGCTTCTGAccgcccccgctcccttcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957511 401 + 64156825 CAGCAAAGCCTTGTC--TGGGAGaaacactcacccacagctcctcct-ccctcccctgtgc---------------cggaaagccagagatga-ccacacccaggccctgttgtcagggggctcctggtttggtgaaAATGGTTCCAAAACACAGACATCCCTGGAATGGGGGTAGTGTGGCT----TAGGACAAACGTGGTGGTCAGTTGCCTGTTGGG-GGCCTCCTCCCTG--CA-CCCCAGGCCAGCTGCCCTCCCTCTCTGAGCCTCCTTTGCGTCTGCCCCTCGCGGAATGGGCCAGGTCG---CCCGCCTGGCAGGG-CCACCGAGGAATCCAGCCAGAACCTCACGTAAAGGTGCTTGGCACATGTCGAGCCCCCAGGCAGATGTGCGCACCCCCGCCTCCCCCGCTTTCTTCTGACCGCCCC-----------T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54961366 401 + 59248254 CAGCAAAGCCTCGTC--TGGGAGaaacactcacccccagctcctcct-ccctcccctgtgc---------------cggaaagccagagatga-ccacacccaggccctgttgtcagggggctcctggtttggtgaaAATGGTTCCAAAACACAGACATCCCTGGAATGGGGGTAGTGTGGCT----TAGCACAAACGTGGTGGTCAGTTGCCTGTTGGG-GGCCTCCTCCCTG--CA-CCCCAGGCCAGCTGCCCTCCCTCTCTGAGCCTCCTTTGCATCTGCCCCTCGCGGAATGGGCCAGGTCG---CCCGCCTGGCAGGG-CCACCGAGGAATCCAGCCAGAACCTCACGTAAAGGTGCTTGGCACATGTCGAGCCCCCAGGCAGATGTGCGCACCCCCGCCTCCCCCGCTTTCTTCTGACCGCCCC-----------T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091517 401 + 51301725 cagcaaAGCCTCGTC--TGGGAGAAACACTCACCCACAGCTCGTCCT-CCCTCCCCTGTGC---------------CGGAAACCCGGAGATGA-CCACACCCAGGCCCTGTTGTCAGGGAGCTCCTGGTTTGGTGAAAATGGTTCCAAAACACAGACATCCCTGGAATGGGGGTAGTGTGGCT----TAGCACAAACGTGGTGGTCAGTTGCCTGTTGGG-Ggcctcctccctg--ca-ccccagGCCAGCTGccctccctctctgagcctcctttGCGTCTGCCCCTCGCGGAATGGGCCAGGTCA---CCCGCCTGGCAGGG-CCACCGAGGAATCCAGCTAGAACCTCATGTAAAGGTGCTTGGCACATGTCGAGCCCCCAGGCAGATGTGCGCACCCCCACCTCCCCCGCTTTCTTCTGACCGCCCC-----------T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46799088 401 + 50890351 CAGCAAAGCCTCGTC--TGGGAGaaacactcacccacagctcctcct-ccctcccctgtgc---------------cagaaacccagagatga-ccacacccaggccctgttgtcagggagctcctggtttggtgaaAATGGTTCCAAAACACAGACATCCCTGGAATGGGGGTAGTGTGGCT----TAGCACACACGTGGTGGTCAGTTGCCTGTTGGG-GGCCTCCTCCCCG--CA-CCCCAGGCCAGCTGCCCTCCCTCTCTGAGCCTCCTCTGCGTCTGCCCCTCGCGGAATGGGCCAGGTCG---CCCGCCTGGCAGGG-CCACCGAGGAATCCAGCCAGAACCTCACGTAAAGGTGCTTGGCACGTGTCGAGCCCCCAGGCAGATTTGCGCACCCCCACCTCCCCCGCTTTCTTCTGACCGCCCC-----------T i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45374495 394 + 49145316 TAGCAAAGCCCTGTCCGTGGGAAAAACACTCACCTACAGCTCCTCCT-GCAG-CCCTCTGC---------------CAGAAACCCAGAGCTGA-CCACACCCAGGCC--GTTGTCAGGGAGCTTCTGGTTTGGTGAATATGGTT------CACAGACATCTCTGGAATGG-GGCAGTGTGGCCTATGTAGCACAAATGAGGTGGTTGGCTTCCTGTCTAG-TGCCTCCTCCCTG--CA-CCCCAGACCAGCTGCCCTCCCTTTCCCAGCCTCCTTTGCATCTGTCCCTCGTGGAATGAGCCAGGTCC---CCCTCCTGACAGGG-CCACTGAGGGGTCCAACCAGAGCTTCATGTAAAGGCGCCCGGCACACGGTGATCCCCCC-GCAGATTCGCGCACGCCCACCT-CTCCGCTTTCTTCTGACTGCTCC------------ i calJac3.chr22 C 0 C 0 s canFam3.chr1 19597145 393 - 122678785 -AGCAGACCCCTGTCAGAGGTAGGCATTTTTACCTACAGCTCTTCCTCCCCTCCCCTGGGCCTGCAGATGCGCTCACGGGAACCCAGAGATGATTCACAT-TAGGCCCTGTCATCAGGGTGTCCCcagtatggtggtaactgttataaaaca------------gagcaggggctgtgtagct----ctg--cagacttgggggcaagtt-cctgttgggctgctgcctcactttccatcctcaggcaggtgatttcacctctctgagcctcctctgaatc--ctccttctgaaaggggacttatcaggccctcccaggcagagcccacccagaaattcaaccagaaactcacctaaaggcacaaagcattcggtgagcccccaaacaaatgT---------------CCTGTGTTCCTTCTGACCTGTTT------------ i canFam3.chr1 C 0 C 0 e mm10.chr7 3634979 1203 + 145441459 I a score=1118082.000000 s hg38.chr19_GL949747v2_alt 98972 295 + 729520 ccctccctcccaccGCAGGTGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTACATCTACCACAGTGACATCGTGCAGTCCCTGCCACCGGTGAGC----------------C---CACTGCGTCATGGCCCCTCCCCCGGCCCCCCTGGAGCCTTCCGCTG---------------TGCCCAGA---CAGCCTGAGC---AGCCA--CCCACCATCTG--GCCCAGCTGACGGTAGCACTCAGGAGCTGGGA-- s panTro4.chr19 59032468 295 + 63644993 ccctccctcccaccGCAGGTGTGGCCGGCGGCCTGACGAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTACATCTACCACAGTGACATCGTGCAGTCCCTGCCACCGGTAAGC----------------C---CACCGCGTCACGGCCCCTCCCCCGGCCCCCCTGGAGCCTTCCGCTG---------------TGCCCAGA---CAGCCTGAGC---AGCCA--CCCACCATCTG--GCCCAGCTGACGGTAGCACTCAGGAGCTGGGC-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55910567 296 + 60714840 ccctccctcccaccGCAGGTGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCAGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTACATCTACCACAGTGACATCGTGCAGTCCCTGCCCCCGGTGAGC----------------C---CACCGCGTCACGGCCCCTCCCCCGGCCCCCCTGGAGCCTTCCGCTG---------------TGCCCAGA---CAGCCTGAGC---AGCCA-CCCCACCATCTG--GCCCAGCTGACGGTAGCACTCAGGAGCTGGGA-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102674076 294 - 106955855 ccctccctcccaccGCAGGTGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTATATCTACCACAGTGACATCGTGCAGTCCCTGCCCCCGGTGAGC----------------C---CACCGCGTCACGGCCCCTCCGCTG--CCCCCCGGAGCCTTCCGCTA---------------TGCCCAGA---CAGCCTGAGC---AGCCA-CCCCACCATCTG--GCCCAGCTGACAGTAGCACTCAGGAGCTGGGA-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957912 296 + 64156825 GTCCTCCTCCCACCGCAGGCGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTACATCTACCACAGTGACATTGTGCAGTCCCTGCCCCCGGTGAGC----------------C---CACCGCGTCACAGCCCCTCCCCCGGCTCCCCTGGAGCCTTCCGCC----------------TGCCCAGA---CGGCCTGAGC---AGCCACCCCCACCATCtg--gcccagctgacagtagcactcaggagccgggg-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54961767 296 + 59248254 GTCCTCCTCCCACCGCAGGCGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTACATCTACCACAGTGACATTGTGCAGTCCCTGCCCCCGGTGAGC----------------C---CACCGCGTCACAGCCCCTCCCCCGGCTCCCCTGGAGCCTTCCGCC----------------TGCCCAGA---CGGCCTGAGC---AGCCACCCCCACCATCtg--gcccagctgacagtagcactcaggagccggga-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091918 296 + 51301725 GTCCTCCTCCCACCGCAGGTGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTTGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTACATCTACCACAGTGACATTGTGCAGTCCCTGCCCCCGGTGAGC----------------C---CACTGCGTCACGGCCCCTCCCCCGGCTCCCCTGGAGCCTTATGCC----------------TGCCCAGA---CGGCCTGAGC---AGCCACCCCCACCATCTG--GCCCAGCTGACAGTAGCACTCAGGAGCCGGGA-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46799489 311 + 50890351 GTCCTCCTCCCACCGCAGGTGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCGCACACCGGCTACATCTACCACAGTGACATTGTGCAGTCCCTGCCCCCGGTGAGCCGCTGCGCCACGTGAGC---CACTGCGCCACGGCCCCT-CCCCGGCTCCCCTGGAGCCTTCCGCC----------------TGCCCAGA---CGGCCTGAGC---AGCCACCCCCACCATCtg--gcccagctgatggtagcactcaggagccggga-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45374889 286 + 49145316 CTCTTCCCTCCCCTGCAGGTGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACACTGTCGGGCTTCTCATCCACCTCAGTGCTGCCCCATACCGGCTACATCTACCACAGCGACATCGTGCAGTCCCTACCCCCGGTGAGC----------------C---CACAGTGTCATTG-CCTGCCCCTGGCTCCCCTGGAACTTTCCACTG---------------TGCCCAGA---CAGCCT-AGA---AGCCACCCCTACCAT-----------CTGACAGTAGCACTCAGGGGATGGGA-- i calJac3.chr22 C 0 C 0 s mm10.chr7 3636182 256 + 145441459 CCTCACCTCTTGTTGCAGGTGTGGCTGGAGGGCTCACCAACCTCTCTAAGATGCCTGCCTGCAACATCATGCTGCTGGGAGCCCAGCGCAAGACCCTGTCTGGCTTCTCTTCTACCTCAGTGTTGCCTCATACTGGTTATATCTACCACAGTGACATTGTGCAGTCTCTGCCCCCAGTGAGT----------------CCTTCACCTTGTC----CCCTTCCCCCAGCCACC---AGGCCTT----------------------------------------------------------ATCTG--GCTTGGCTGGCAATATTCCTCAGGCTCCTGGA-- i mm10.chr7 I 1203 I 95 s canFam3.chr1 19597538 309 - 122678785 CCCTCCTTCCTGTTGCAGGGGTGGCTGGGGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTTGGGGCCCAGCGGAAGACGCTGTCCGGCTTCTCGTCCACGTCTGTGCTGCCCCACACTGGTTACATCTACCACAGTGACATTGTGCAGTCTCTGCCCCCGGTGAGT---------------GC---CACTGGCATGTGGCTC-----------CCCGCAGAGCCTTTTGCTGGGCCAGAAGCAGCCTTGTCCAGAGGGCAGTGTGAGCCCAAGCAAGTTGCCCCCTCTGCTCCTCAGTTCCCATTGAC---TAGGAGCTcagagg i canFam3.chr1 C 0 C 0 a score=1085808.000000 s hg38.chr19_GL949747v2_alt 99267 441 + 729520 acagggtggcatgggacgtgagagccagggctctgcagcagaccagctccag--------------------cacccaccagtcaggtgactg-----------------tgggcaagaggcatgagcgccctgtgcctcagtctcctcccctatcaaatgggag-cacagcgcctgcttcat-gagttgggacgagggctcagtgcacatgaagcacttacagttcaggcctagctcacgacaagcAGCGTCGGGTTAGCGTGCAACT------gctccgaagaccaccctcaggtttgaccattcactagaaagactcacagaatccactgagggctgc------------------------------------acatcag----ccatgg--------ggagagacacacaggaggggcaggagaggtcaccaacctcggagcttcccgg-gtcctctccctgcagtcgggacacatcaccatcccagcatcgacgcctgacagcacacaCACAGGCC-----CGCTAGCCTggcg s panTro4.chr19 59032763 441 + 63644993 acagggtggcatgggacgtgagagccagggctctgcagcagaccagctccag--------------------cacccaccagtcgggtgactg-----------------tgggcaagaggcgtgagcgccctgtgcctcagtctcctcccctatcaaatgggag-cacagcgcctgcttcat-gagttgggacgagggctcagtgcagatgaagcacttacaggtcaggcctagctcacaacaagcAGCGTCGGGTTAGCGTGCAGCT------gctccgaagaccaccctcaggtttgaccattcactagaaagactcacagaatccactgagggctgc------------------------------------acatcag----ccatgg--------ggagagacacactggaggggcaggagaggtcaccaacctcggagcttcccgg-gtcctctccctgcagtcgggacacatcaccctcccagcatcgacgcctgacagcacacaCACAGGCC-----CGCTAGCCTggcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55910863 441 + 60714840 acagggtggcatgggacgtgagagccagggctctgcagcacaccagctccag--------------------cacccaccagtcgggtgactg-----------------tgggcaagaggcgtgaacgctctgtgcctcagtctcctctcctatcaaatggcag-cacagcgcctgcttcat-gagttgggacgagggctcagtgcagatgaagcacttacaggccaggcctagctcacgacaagcAGCATCGGGTTAGTGTGCAACT------GCTccgaagaccaccctcaagtttgaccattcactagaaagactcacagaatccaCTGAGGGCTGC------------------------------------ACATCAG----CCATGG--------GGAGAGACACACAGGAGGGGCAGGAGAGGTCACCAACCTCGGAGCTTCCGGG-GTCCTCTCCCTGCAGTCGGGACACATCACCGTCCCAGCATCGACGCCTGACAGCACACACACAGGAC-----CGCCAGCCTGGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102674370 453 - 106955855 acagggtggcatgggacgtgagagccagggctctgcagcagaccagctccag--------------------cacccaccagtcgggtgactg-----------------tgggcaagaggcatgagcgccctgtgcctcagtctcctcccctatcaagtgggag-cacagcgcctgcttcat-gagttgggacgagggctcagtgcagatgaagcacttataggtccggcctagctcacgacaagcAGCGTCGGGTTAGCGTGCAGCT------GCTccaaagaccaccctcaggtttgaccattcactagaaagactcactgaatccactgagggctgc------------------------------------tgtgctggggactatagtttataacagatagagacacaggaggggcaggagaggtcaccaacctcggagcttcccgg-gtcctctccctgcagtcaggacacatcaccgtcccagcatcggtaactgacagcacacacacaggac-----cgccagccTggcg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59958208 426 + 64156825 gcagggtagcatgggatgtgagagccagggttctgcagca------------------------------------cacctgtcgggtgactg-----------------tgggcaagaggcgtgagtgccctgtgcctcagtctcctcccctcgcaaatgggag-cacagcgcctgcttcac-gagtttgggcgagggctccatgcagacgaggccctcacaaggcaggcctagctcacgacaagcAGCGTCGGGTTA----GCAGCT------GCTCCGAAGGCCACC--------------GTCACTGGAAAGA--CACGGAA-CCCCTGAGGGCTGC-TGTGCTGGGGACTG---------TATAacagattaacattag----ccacag--------ggagagacacacaggaggagcagaagaggtcaccaacctcggagggcgatgt-gtcctctccctgcagtcaggacacatcgccctcccggcatcgatgcctgacag----cacacagggC-----CGCCAGCCTggcg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54962063 435 + 59248254 acagggtagcatgggatgtgagagccagggttctgcatca------------------------------------cacctgtcgggtgactg-----------------tgggcaagaggtgtgagtgccctgtgcctcagtctcctcccctcgcaaatgggag-cacagcgcctgcttcac-gagtttgggcgagggctccatgcagacgaggccctcacaaggcaggcctagctcacgacaagcAGCGTCGGGTTA----GCAGCT------GCTCCGAAGGCCACC--------------GTCACTGGAAAGa--cacggaa-cccctgagggctgc-tgtgctggggactatagtt----tataacaaactaacattag----ccacag--------ggagagacacacaggaggagcaggagaggtcaccaacctcggagggcgatgt-gtcctctccctgcagtcaggacacatcgccctcccggcatcgatgcctgacagcacacacacagggc-----cgccagccTggcg i macFas5.chr19 C 0 I 15700 s papAnu2.chr19 47092214 427 + 51301725 ACAGGGTAGCATGGGATGTGAGAGCCAGGGTTCTGCATCA------------------------------------CACCTGTCGGGTGACTG-----------------TGGGCAAGAGGCGTGAGCgccctgtgcctcagtctcctccccTCGCAAATGGGAG-CACAGCGCCCGCTTCAT-GAGTTGGGACGAGGGCTCAATGCAAATGAAGCCCTTACAAGGCAGGCCTAGCTTACGACAAGCAGCGCTGGGTTA----GCAGCT------GCTCCGAAGGCCACC--------------GTCACTGGAAAGA-----------ACCTGAGGGCTGC-TGTGCTGGGGACTATAGTT----TATAACAAATTAACATTAG----CCACAG--------GGAGAGACACACAGGAGGAGCAGGAGAGGTCACCAACCTCGGAGGGCGATGT-GTCCTCTCCCTGCAGTCAGGATACATCGCCCTCCCAGCATCGATGCCTGACAGCACACACACAGGGC-----CGCCAGCctggtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46799800 436 + 50890351 acagggtggcatgggatgtgagagccagggttctgcatca------------------------------------cacctgtcgggtgaccg-----------------tgggcaagaggcgtgagtgccctgtgcctcagtctcctcccctcgcaaatgggag-cacagcgtgtgcttcat-gagttgggacgagggctcaatgcagacgaagccctcacaaggcaggcctagctcacgacaagcAGCGTTGGGTTA----GCAGCT------GCTCCGAAGGCCACT--------------GTCACTGGAAAGA--CACGGAAGCCCCTGAGGGCTGC-CGTGCTGGGGACTATAGTT----TATAACAAATCAACATTAG----CCACAG--------GGAAAGACACACAGGAGGAGCAGGAGAGGTCACCAACCTCGGAGGGCGATGT-GTCCTCTCCCTGCAGTCAGGACACATCGCCCTCCCGGCATCGATGCCTGACAGCACACACACAGGGC-----CGCCAGCCTggcg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45375175 487 + 49145316 acagggtggcacggggcgtgagagccaggactctgcagtccaccagctctggtgcccaggctctggcagcgccacccaccaatca-gtgaccg-----------------tgggcaagaggcgtgagcgccctgtgcctcagtctc--cccccatcagacgggag-cacagcacctgcttcat-gagttaggacgagggctcaatgcagatgaagcccttccaagtcaggcctagctcacgacaagcAGCGTCGGGTTAGCGTGCAGCT------gctccaaagaccaccctcaggtctaaccgttcactagaaagactcatagaaccccctgaggactgc-tgtgctggggact-tagtt----tataacagtttaacatcag----ccatgg--------g----gacacacaggaggggcaggagaggtcagtgcccctggagcttcccag-gtcctct--cTGCCATCAGGGTACATCAGCCTCCCAGCTTTGATGCCTGGCAGCACATACACAGACCTAGAACACAAGCAGGAgg i calJac3.chr22 C 0 I 2 s canFam3.chr1 19597847 461 - 122678785 atagggtcacacggggcataggaacaaggaccccagagcaga------------------------------tgtacaggggtagggattctggagctctacttaacaactgggcaagaggcatgag----ctgtgcctcagtgt-------tgtaaaatgggggaaatagaacctgcttcctggggttgtgattaggactcc---tatatgaaacactt-----ccaggtcttgcacataacaagcgATGTC--ATTAGCTtgcaagttgtaggggtctccaagccatccttgggttcagtagcccactagaggggtgtacagactccaagttgacccacttgggctatggtttgtcgtcgtgaaaggacagact-atttcag----ccactg--------gaggaagcgtatgaggcaggagccagaagt-gccagcctcagcgctttcagtcatcctctcc-----atcaggacatgtcac--tcctggcctccacatgtgacagcgtgcagaaagaac-----cgcccccaggg-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3636438 95 + 145441459 I a score=37311.000000 s hg38.chr19_GL949747v2_alt 99708 15 + 729520 gggcgcagtggctcg s panTro4.chr19 59033204 15 + 63644993 gggcgcagtggctcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55911304 15 + 60714840 gggcgcagtggcttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102674823 15 - 106955855 gggcacggtggctcg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59958634 15 + 64156825 gggcgcggtggctca i rheMac3.chr19 C 0 I 1923 s macFas5.chr19 54978198 15 + 59248254 gggcgcggtggctct i macFas5.chr19 I 15700 C 0 s papAnu2.chr19 47092641 15 + 51301725 gggcacggtggctca i papAnu2.chr19 C 0 I 1561 s chlSab2.chr6 46800236 15 + 50890351 gggcaccgtggctca i chlSab2.chr6 C 0 I 1788 s calJac3.chr22 45375664 15 + 49145316 aggcacggaggctca i calJac3.chr22 I 2 C 0 s canFam3.chr1 19598308 11 - 122678785 aggcccagctg---- i canFam3.chr1 C 0 C 0 e mm10.chr7 3636438 95 + 145441459 I a score=85762.000000 s hg38.chr19_GL949747v2_alt 99723 29 + 729520 tgcctgtcatcccagcactttgggaggcc s panTro4.chr19 59033219 29 + 63644993 cactggtcatcccagcactttgcgaggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55911319 29 + 60714840 cgcctgtcatcccagcactttgggaggcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102674838 27 - 106955855 --cctgtcatcccagcactttgggaggcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59960572 29 + 64156825 cgcctgtcaccccagcactttgggaggcc i rheMac3.chr19 I 1923 C 0 s macFas5.chr19 54978213 29 + 59248254 cacctgtcaccccagcactttgggaggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47094217 29 + 51301725 cgcctgtcaccccagcactttgggaggcc i papAnu2.chr19 I 1561 C 0 s chlSab2.chr6 46802039 29 + 50890351 tgcctgtcacgccagcactttgggaggcc i chlSab2.chr6 I 1788 C 0 s calJac3.chr22 45375679 29 + 49145316 tgcctgtaattccagcactttgggaggcc i calJac3.chr22 C 0 I 467 s canFam3.chr1 19598319 29 - 122678785 agccttgaagttcagtctttcctggggct i canFam3.chr1 C 0 C 0 e mm10.chr7 3636438 95 + 145441459 I a score=490022.000000 s hg38.chr19_GL949747v2_alt 99752 172 + 729520 gaggcgggcagat-cacctg---aggtcaggtgttcgagaccagcctggccaacatggtgaaaccccatctctaccaaaaatacaaaaaa-ctagct-gggtatagtggcacacacttataatcccagctacttgggagg--ctgaggcaggagaatcgcttgaacccaggaggtggagg s panTro4.chr19 59033248 173 + 63644993 gaggcgggcagat-cacctg---aggtcaagtgttcgagaccagcctggccaacatggtgaaaccccatctctaccaaaaatacaaaaaaactagct-gggtatagtggcacacacttataatcccagctacttgggagg--ctgaggcaggagaatcacttgaacccaggaggtggagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55911348 173 + 60714840 gaggtgggcagat-cacctg---aggtcaggtgttcgagaccagcctggccaacatggtgaaaccccatctctaccaaaaatacaaaaaaactagct-gggtatggtggcccacacttataatcccatctacttgggagg--ctgaggcaggagaatcacttgaacccaggaggtggagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102674865 173 - 106955855 gaggcgggcagat-cacctg---aggtcaggtgttcgagaccagcctggccaacatggtgaaaccccatctccactaaaaatacaaaaaaactagcc-gggtatgtttgcacacacttataatcccaggtacttgggagg--ctgaggcaggagaatcgcttgaacccaggaggtggagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59960601 173 + 64156825 aaggcgggcagat-catctg---aggtcaggagatcgagaccatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaaaatgagcc-aggtatggtggcgcacacttacaattccagctacttgggagg--ctgaggcaggagaatcgcttgaacccaggagatggaag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54978242 173 + 59248254 aaggcgggcagat-catctg---aggtcaggagatcgagaccatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaaaatgagcc-aggtatggtggcgcacacttacaattccagctacttgggagg--ctgaggcaggagaatcgcttgaacccaggagatggaag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47094246 173 + 51301725 gaggcgggcagat-catctg---aggtcaggagatcgagaccatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaaaatgagcc-aggtatggtggcgcacacttacaattccagctacttgggagg--ctaaggcaggagaatcgcttaaacccaggagatggaag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46802068 173 + 50890351 aaggcgggcagat-catctg---aggtcaggagttcgtgaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaacaatgagcc-aggtatggtggcgcacacttacaattccagctacttgggagg--ctgaggcaggagaattgcttgaacccaggagatggaag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45376175 172 + 49145316 gaggcaggtggat-gactgg---agatcaggagtttgagaccagcctggccaacatggtgaaacctcatctctact-aaaatattacaaaattagtc-aggtgtggtggcacatacttgtaatcccagctgcttggaaag--ctgaggcaggagaattgcttgaacccaggaggtggagg i calJac3.chr22 I 467 C 0 s canFam3.chr1 19598348 152 - 122678785 tagttgaatagatgtgactgggtagcccaggtggttga------tctgggctccaggttgagagcctgt----------aacccaaagacctcaccctaaata---------acacggttggtctctGCCTTGTCCGAGGCCCCCAGGCCAAAAGATCACT---GCCCAGGAGATGAGGG i canFam3.chr1 C 0 I 3047 e mm10.chr7 3636438 95 + 145441459 I a score=2712050.000000 s hg38.chr19_GL949747v2_alt 99924 960 + 729520 ttgcagtgagctaagatcataccactgccctccagcctgggtgacagagtgagact-ctgtctcaaaaaaaaaaaaaaa------------------caagaCAGGTTCTGGGACAGA------------CAGGCCTGGGTCCAGACCCTGCTCTGTCCGACTGTGGCGAGTTACCTCAGGCTCACGGCCCTGTGCCCTGCCTGGCCTCCCCCAGGGATGGGGAGAACAATAGCACTGATGGCCAAGGCTGGGCAGGCACTTCCTGGCCCCACCCCCCAGCCCTGTGTGGG----GTTTTTTTTGTG--------GTCTTTTCTGCGACCCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTCACCCCATCCTGGGAGGAGAGAGAGTGGGCGATAGAACCCAGGACGGGTGGGCCTGGGGCTCGGGGCTCCAGCTGCCTCACTGCACCCCTGCCATCGCCACCGCCTCACAGCCCTGGGCATATGGGTTAAACCTGCCCCAGGGAGCCTGATGTCTTGTCAC-CCAGGCCTCTGCCTCTTCATTTGGCCATCTCACATCGGTCCAGGCACAGGCCGTAGACACCACAGGCCTGTAAGGGAGGCCAGGGCTGGC---CATCGCTTcactgtggctgacagct-gggctctgtttgcagtttggattggaaccctggctccatcacctgctggctgtctccctggccacatgacttgaagccttggtttccacatctgaaaagggggtgcaatgatcacaccagcccaatatttgaatatttgatgagatgatccgaggggcgtgcttagcatggggctggcatccagGCCGAGTGCACTCCC-------CCCGGCGTCTCCACAGTCACCACCGTCCTCGTTGTCAGCGTGCCTTACTGTCATCCTTACCTGA--TGGCCACTTATCAGCTGGGACATGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTAGGAGCTGAGAGCACACACCTCT s panTro4.chr19 59033421 965 + 63644993 ttgcagtgagctaagatcataccactgccctccagcctgggtgacagagtgagact-ctgtctcaaaaaaaaaaaaaaaa------------acaaGCAAGacaggttctgggacaga------------caggcctgggtccagaccctgctctgtcCGACTGTGGCAAGTTACCTCAGGCTCACGGCCTTGTGCCCTGCCTGGCCTCCCCCAGGGATGGGGAGAACAATAGCACTGATGGCCAAGGCTGGGTGGGCACTTCCTGGCCCCACCCCCCAGCCCTGTGTGGG----TTTTTTTTTGTG----TGTGGTCTTTTCTGCGACCCTTTAGGTCAGGCACTGCTACTGGAATACA--CCCAGGGAGGCTGGCAGGTCACCCCATCCTGGGAGGAGAGAGAGTGGGCGATAGAACCCAGGACGGGTGGGCCTGGGGCTCGGGGCTCCAGCTGCCTCACTGCACCCCTGCCATCACCACCGCCTCACAGCCCTGGGCATATAGGTTAAACCTGCCCCAGG-AGCCTGATGTCTTGTCAC-CCAGGCCTCTGCCTCTTCATCTGGCCATCTCACATCGGTCCAGGCACAGGCCGTAGACACCACAGGCCTGTAAGGGAGGCCAGGGCTGGC---CATTGCTTcactgtggctgacagct-gggctctgtttgcagtttggattggaaccctggctccatcacctgctggctgtctccctggccacatgacttgaagccttggtttccacatctgaaaagggggtgcaatgatcacaccagcccgatatttgaatatttgatgagatgatccaaggggcgtgcttagcacggggttggcatccagGCCGAGTGCACTCCC-------CCCGGCGTCTCCA--GTCACCACCGTCCTCGTTGTCAGCGT--CTTACTGTCATCCTTACCTGA--CGGCCACTTACCAGCTGGGACATGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGGAGGAGCTGAGAGCACACACCTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55911521 968 + 60714840 ttgcagtgagctaagatcataccactgccctccagcctgggtgacagagtgaga---ctgtctcaaaaaaaaaaaacaa-----------------GCAAGacaggttctgggacaga------------caggcctgggtccggaccctgctctgtccgactgtggcgagtgacctcaggctcatggccctgtgccctgcttggcctcccccagggatggggagaacaataGCACTGATGGCCAAGGCCGGTTGGGCATTTCCTGGCCCCACCCCCCAGCCCTGTGTGGG----TTTTTTTTTTTT--TTTTTGGTCTTTTCTGTGACCCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTCGCCCCATCCTGGGAGGAGGGAGAGCGGGCGATAGAACCCAGGACTGGTGGGCCTAGGGCTCGGGACTCCAGCTGCCTCACTGCACCCCTGCCATCGCCGCCGCCTCACAGCCCTAGGCATATGGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCAC-CCAGGCCTCTGCCTCTTCATTTGCCCATCTCACATCAGTCCAGGCACAGGCCGTAGACATCACAGGCCCGGAAGGGAGGCCAGGGCTGGCCATCATCACTTcactgtggctgacagct-gggctctgtttgcggtttggattggaaccctggctccatcacctgctggctgtctccctggccacatgacttgaagccttggtttccacatctgaaaagggggtgcaatgatcacaccagcccaatatttgaatatttgatgagatgatccaaggggcgtgcttagcacagggctggcatccagGCCGAGCACACTCCC-------CCCGGCGTCTCCACAGTCACCACTGTGCTCGTCGTCAGCATGTCTTACTGTCATCCTTACCTGA--CGGCCACTTACCAGCCGGGACATGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTGGGAGCTGAGAGCACACACCTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102675038 970 - 106955855 ttgcagtgagctaagaccataccactgccctccagcctgggtgacagagtgagact-ctgtctcaaaaaaaaaaaaaaa--------------caaTCAAGACAGGCTCTGGGACAGA------------CAGGCCTGGGTCCAGACCCTGCTCTGTCCAACTGTGGCGAGTGACCTCAGGCTCATGGCCCTGTGCCCTGCCTGGCCTCCCCCAGGGATGGGGAGAACAATAGCACTGATGGCCGAGGCCGGGTGGGCATTTCCTGGCCCCATGCCCCAGCCCTGTGTGGG----CttttttttttttttttttggtcttttCTGTGACCCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTTGCCCCTTCCTGGAAGGAGGGAGAGTGGATGATAGAACCCCGGACTGGTGGGCCTGGGGCTCAGGGCTCCAGCTGCCTCCCTGCACCCCTGCCATCGCCGCCGCCTCACAGCCGTAGGCATATGGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCAC-CCAGGTCTCTGCCTC--CATTTGCCCATCTCACATCGGTCCAGGCACAGGCCGTACACATCACAGGCCCGTAAGGGAGGCCAGGGCTGGC---CATCGCTTCACTgtggctgacagct-gggctctgtttgcagtttggattggaagcctggctccatcacctgctggctgtctccctggccacatgacttgaagccttggtttccacatctgaaaagggggtgcgatgatcgcaccagcctgatatttgagtgtttgatgagatgagccgaggggcgtgcttagcacgggcctggcatccagGCCGAGCGCACTCCG-------CCCGGCGTCTCCACAGTCGTCACTGTCCTCGTCGTCAGTGTGTCTTACTGTCATCCTTACCTGA--CGGCCACTTACCAGCCGGGACATGGCTGTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTGGGAGCTGAGAGCACACACCTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59960774 1005 + 64156825 ttgcag-gggccaagatcacaccactgccctctagtctgggcgacagagtgagact-ctgtctcaaaaaaagaaaaagaaaaaaacagaaaCAtaagcaagacaggctctgggacagacaggcctgggttcaggcctgggtccagaccctgctgtgtccgactgtggcaagtgacctcaggctcatggccctgtgccctgcccggcctcccccagggatggggagaacaatagcacTGATGGACAAGGCCAGGTGGTTGTTTCCTGGCCCCACCCCCCAGGCCTGTGTAGGtttttttttttttttt-ttttttggttttttCTGTGACTCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTCGCCCCATCCTGGGAGGAGGGAGAGCGGGCGATAGAACCCAGGACT-GTGGGCCTGGGGCTCGGGGCTCCAGCCGCCTCACTGCACTCCTGCCATCGCCACCGCCTCACAGCCCTAGGCATGTGGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCA--CCAGGCCTCTGCCTCCTCATTTGCCCATCTCACATCAGTCCAGGCACAGGCCATAGACATCACAGGCCTGTAAGGGAGGCCAGGGCTGGC---CATCGCTgcactgcggctgacagct-gggctctgtttgcagtctggattggaaccctggctccatcacctgctggctgtcttcccggccacatgacttgaagccttggtttccacatctgaaaagggggtgcaatgatcacaccagcctgatatttgcatatttgatgagatgatccgaggggcatacttagcacagggctggcatccaggctgagcgcACTCCCCCGCC--GCCAGTGTCTCCACAGTCACCACTGTCCTCCTCGTCAGCGTGTCTTACTGTCATCCTTACCTGACTCTGCCACTTACCAGCTGGGACGTGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTGGGAGCTAGGAGCACACGCCTCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54978415 1001 + 59248254 ttgcag-gagccaagatcacaccactgccctctagtctgggcgacagagtgagact-ctgtctcaaaaaaagaaaaagaaaaaaacagaaaCATAAGCAAGACAGGCTCTGGGACAGACAGGCCTGGGTTCAGGCCTGGGTCCAGACCCTGCTGTGTCCGACTGTGGCAAGTGACCTCAGGCTCGTGGCCCTGTGCCCTGCCCGGCCTCCCCCAGGGATGGGGAGAACAATAGCACTGATGGACAAGGCCAGGTGGTTGTTTCCTGGCCCCACCCCCCAGGCCTGTGTAGG----tttttttttttt-ttttttggttttttCTGTGACTCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTCGCCCCATCCTGGGAGGAGGGAGAGCGGGCGATAGAACCCAGGACT-GTGGGCCTGGGGCTCGGGGCTCCAGCCGCCTCACTGCACTCCTGCCATCGCCACCGCCTCACAGCCCTAGGCATGTGGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCA--CCAGGCCTCTGCCTCCTCATTTGCCCATCTCACATCAGTCCAGGCACAGGCCATAGACATCACAGGCCTGTAAGGGAGGCCAGGGCTGGC---CATCGCTgcactgcggctgacagct-gggctctgtttgcagtctggattggaaccctggctccatcacctgctggctgtcttcccggccacatgacttgaagccttggtttccacatctgaaaagggggtgcaatgatcacaccagcctgatatttgcatatttgatgagatgatccgaggggcatacttagcacggggctggcatccaggctgagcgcACTCCCCCCAC--TCCAGTGTCTCCACAGTCACCACTGTCCTCGTCGTCAGCGTGTCTTACTGTCATCCTTACCTGACTCTGCCACTTACCAGCTGGGACGTGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTGGGAGCTAGGAGCACACGCCTCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47094419 999 + 51301725 ttgcag-gagccaagatcacaccactgccctctagtctgggcgacagagtgagact-ctgtctcaaaaaaaaaaaaaacaaaaaacagaaacataagcAAGACAGGCTCTGGGACAGACAGGCCTGGGTTCAGGCCTGGGTCCAGACCCTGCTGTGTCCGACTGTGGCAAGTGACCTCAGGCTCATGGCCCTGTGCCCTGCCCGGCCTCCCCCAGGGATGGGGAGAACAATAGCACTGATGGACAAGGCCAGGTGGTTGTTTCctggcccca-cccccaggcctgtgtagg-------ttttttttt-tgttttggttttttctgTGACTCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTCGCCCCatcctgggaggagggagagcggGCGATAGAACCCAGGACT-GTGGGCCTGGGGCTCGGGGCTCCAGCcgcctcactgcactcctgccATCGCCACCGCCTCACAGCCCGAGGCATGTGGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCA--CCAGGCCTCTGCCTCCTCATTTGCCCATCTCACATCAGTCCAGGCACAGGCCGTAGACATCACAGGCCTGTaagggaggccagggctggc---tATCGCTGCACTGCGGCTGACAGCT-GGGCTCTGTTTGCAGTCTGGATTGGAACTCTGGCTCCATCACCTGCTGGCTGTCTTTCCGGCCACATGACTTGAAGCCTTGGTTTCCACATCTGAAAAGGGGGTGCAGTGATCACACCAGCCTGATATTTGCATATTTGATGAGATGATCCAAGGGGCATACTTAGCACGGGGCTGGCATCCAGGCTGAGCGCACTcccccccccGCCCGGTGTCTCCACAGTCACCACTGTCCTCGTCGTCAGCGTGTCTTACTGTCATCCTtacctgactctgccacttaccagctgggACGTGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTGGGAGCTAGGAGCACACGCCTCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46802241 1001 + 50890351 ttgcag-gagccaagatcacaccactgccctctagtctgggcgacagagtgagact-ctgtctcaaaaaaaaaaaaag-aaaaaacagaaaCACAAGCAAGacaggctctgggacagacaggcctgggttcaggcctgggtccagaccctgctgtgtccgactgtggcaagtgacctcaggctcatggccctgtgccctgcccagcctcccccagggatggggagaacaatagcacTGATGGACAAGGCCAGGTGGTTGTTTCCTGGCCCCA-CCCCCAGGCCTGTGTAGG----Gttttttttttt-ttttttggttttttCTGTGACTCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTTGCTCCATCCTGGGAGGAAGGAGAGCGGGCGATAGAACCCAGGACT-GTGGGCCTGGGGCTTGGGGCTCCAGCCGCCTCACTGCACTCTTGCCATTGCCACCGCCTCACAGCCCTAGGCATGTAGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCA--CCAGGCCTCTGCCTCCTCATTTGCCCATCTCACATCAGTCCAGGCACAGGCCGTAGACATCACAGGCCCATAAGGGAGGGCAGGGCTGGC---CATCGCTgcactgcggctgacagct-gggctctgtttgcagtctggattggaaccctggctccatcacctgctggctgtcttcccggccacatgacttgaagccttggtttccacatctgaaaagggggtgcaatgatcgcaccagcctgatacttgcatatttgatgagatgatccgaggggcatacttagcacggggctggcatccaggctgagcgcACTCCCCCACCCGCCCGGTGTCTCCACAGTCACCACTGTCCTCGTCGTCAGCATGTCTTACTGTCATCCTTACCTGACTCTGCCACTTACCAGCTGGGACGTGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTGGGAGCTAGGAGCACACACCTCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45376347 897 + 49145316 ttgcagtgagccaagatcaca-cactgcattccagcctgagcgataaagtaagactcccatctcaaaaaaaaaacaaaa-------------aCAGGCaggacaggctctggggcaga------------caggcctgggtccagatcctgctctgtccggttgcagcaagtgacctcaggcTCATGGCCCTGTGCCCTGCCCGGCCTCCCTCGGGGTCGCAGAGAACAACAGCACCGATGGCCAA-------------------GGCCCCA--TTCCTGCCCTGTGTGGG----GTTGTTGTTTTG--------GTCTTTTCTGTGACCCTTTAGGTCAGGCACTGCTATTGGAACACACCCCCAGGGGTGCTGGTGGGTCACCCCATCCTGGGAGAAGGGAGAGTGGGCTTTAGAACCCAGGAGTGGTGGGCCTGAGGCTCGGGGCTCCAGCCACCTCATAA------GGCCATCACCACTGCCTCACAGCCCTAGGC-TGTGGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCACACAGGGCCTCTGCCGCCTCATCTTCCCATCCCAGATCGGTCCAGGCACAGGATGTAGACATCACAGGCCTGTAAGGGAGGCCAGGGCTggc---catcgcgtcgctgtggctgagagctggggctctgtttgcagtctggatcggaaccctggctccatcacctcccggctgtgtcgctagcgatgtgacttggagccttggtgtccacacctgaaaagggggtgcagtgatcacagcagcccgatgtttgagtattcgatgagatggcccaaagggcacacttagcacggagctggtatccaggctgagtgcACTCCC----------------------------------------------------AGCTGGTGTGCTTACCTGACTCTGCCGCTCACCAGCCCAGACGTGGCTCTGCACCCTGCCCTCATCCCCTCTT-CTGTGAAGAGGGAGCTAAGAGCATACACCTCT i calJac3.chr22 C 0 C 0 e mm10.chr7 3636438 95 + 145441459 I e canFam3.chr1 19598500 3047 - 122678785 I a score=239302.000000 s hg38.chr19_GL949747v2_alt 100884 94 + 729520 AGAGCCCAAGGGTGGAAAGCCC-CCTTCCAGGACCCCAGGTAGAG-----CCAGAGGAGGAGCGCGCGCGGTTGCTTTGCTGTTACCTCTGTCTGTCTGT s panTro4.chr19 59034386 94 + 63644993 AGAGCCCAAGGGTGGAAAGCCC-CCTTCCAGGACCCCGGGTAGAG-----CCAGAGGAGGAGCGCGCGCGGTTGCTTTGCTGTTACCTCTGTCTGTCTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55912489 92 + 60714840 AGAGCCCAAGGGTGGAAAGCCC-CCTTCCGGGA-CCAGGGTAGAG-----CCAGAGGAGGAGCGTGCGCGGTC-CTTTGCTATTACCTCTGTCTGTCTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102676008 94 - 106955855 AGAGCCCACGGGTGGAAAGCCC-CCTTCCGGGACCCAGGGTAGAG-----CCAGAGGAGGAGTGCGCGCGGTTGCTTTGCTATTACCTCTGTCTGTCTGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59961779 94 + 64156825 AGAGCCCATGGGTGGACAGCCC-CCTTCCGGGACCCAGGGTAGAG-----CTGGAGGAGAAGTGCCCGTGGTTGCTTTGCTATTACCTCTATCTGTCTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54979416 94 + 59248254 AGAGCCCACGGGTGGACAGCCC-CCTTCCGGGACCCAGGGTAGAG-----CTGGAGGAGAAGTGCCCGTGGTTGCTTTGCTATTACCTCTATCTGTCTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47095418 94 + 51301725 AGAGCCCACGGGTGGACAGCCC-CCTTCCGGGACCCGGGGTAGAG-----CTGGAGGAGAAGTGCCCGTGGTTGCTTTGCTATTACCTCTATCTGTCTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46803242 94 + 50890351 AGAGCCCACGGGTGGACAGCCC-CCTTCCGGGACCCAGGGTAGAG-----CTGGAGGAGAAATGCCTGTGGTTGCTTTGCTATTACCTCTATCTGTCTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45377244 66 + 49145316 AGAGCCTGC-----------------------------AGTGGAG-----CCAGATGAGAAGCACCCACTGTTGGTGTGCAGTTATGTCTGTCTGTCTGT i calJac3.chr22 C 0 C 0 s mm10.chr7 3636533 97 + 145441459 AGAGCCCACGGGTATGAGGCTTACCTCCCAGAGTCTGGGGTATGGCTGCCCTAGATGAGGAGTGACTATTGTAG--TGGCTGTTACCT-TCTCTAGAGGT i mm10.chr7 I 95 C 0 e canFam3.chr1 19598500 3047 - 122678785 I a score=548290.000000 s hg38.chr19_GL949747v2_alt 100978 133 + 729520 CTCACACAGATTCCACCCCCGTTTTCCGTTGCTCCAGGATCTGCGGCGGAAAGCGGCCCGGCTGGTGGCCGCCAAGTGCACACTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACAGAAGGGAAGGTGA----------------------------GG s panTro4.chr19 59034480 133 + 63644993 CTCACACAGATTCCACCCCCGTTTTCCGTTGCTCCAGGATCTGCGGCGGAAAGCGGCCCGGCTGGTGGCCGCCAAGTGCACACTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACAGAAGGGAAGGTGA----------------------------GG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55912581 133 + 60714840 CTCACACAGATTCCACCCCCGTTTTCCATTGCTCCAGGATCTGCGGCGGAAAGCGGCCCGGCTGGTGGCCGCCAAGTGCACACTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACGGAGGGGAAGGTGA----------------------------GG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102676102 119 - 106955855 CTCATACAGATTCCACCCCCGTTTTCCGTTGCTCCAGGATCTTCGGCGGAAAGCGGCCCGGCTGGTGGCCGCCAAGTGCACACTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCAC------------------------------------------GG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59961873 161 + 64156825 CTCACACAGATTCCACCCCCGTTTTCCATTGCTCCAGGATCTCCGGCGGAAAGCGGCCCGGCTGGTGGCTGCCAAGTGCACGTTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACggaggggaaggtgaggagaggaaggtgagggggggaaggtgagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54979510 161 + 59248254 CTCACACAGATTCCACCCCCGTTTTCCATTGCTCCAGGATCTCCGGCGGAAAGCGGCCCGGCTGGTGGCTGCCAAGTGCACGTTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACGGAGGGGAAGGTGAGGAGGGGAAGGTGAGGGGGGGAAGGTGAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47095512 161 + 51301725 CTCACACAGATTCCACCCCCGTTTTCCATTGCTCCAGGATCTCCGGCGGAAAGCAGCCCGGCTGGTGGCTGCCAAGTGCACGTTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACggaggggaaggtgagcgggggaaggtgaaggggggaaggtgagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46803336 134 + 50890351 CTCACACAGATTCCACCCCCGTTTTCCATTGCTCCAGGATCTCCGGCGGAAAGCGGCCCGGCTGGTGGCTGCCAAGTGCACGTTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACggaggggaaggtgag---------------------------gg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45377310 133 + 49145316 CTCACACAGATTCCATTCCCGTTTTCCATTGCTCCAGGATCTCCGGCGGAAAGCGGCCCGGCTGGTGGCTGCTAAGTGCACGCTGGCAGCCCGCGTAGACAGTTTCCATGAGAGCACGGAGGGGAAGGTGA----------------------------GG i calJac3.chr22 C 0 C 0 s mm10.chr7 3636630 113 + 145441459 T-----CAGTTTCCTTTCTC-CTTGCCATTGCTCCAGGATCTCCGGCGGAAGGCGGCCCGCCTAGTGGCTGCCAAGTGTACACTGGCAGCTCGTGTGGACAGCTTCCATGAGAGCAC------------------------------------------AG i mm10.chr7 C 0 C 0 s canFam3.chr1 19601547 131 - 122678785 CTCCCATTGACTCTGCCCCC--TTTCTGCTGCCTCAGGATCTCCGGCGGAAAGCGGCTCGGCTGGTGGCTGCCAAGTGCACACTGGCAGCCCGTGTGGACAGCTTCCACGAGAGCACAGAAGGGAAGGTGA----------------------------GG i canFam3.chr1 I 3047 I 930 a score=1194434.000000 s hg38.chr19_GL949747v2_alt 101111 411 + 729520 AGGGAAAGGTGAG----------GGGCGGCCGGGCGTCTTTTCCTCTGGGCCTGGGGTGTCTCTGCAGGGAGA-CCCTCAGCAGGGAG----------------CCCACCCCAGCGAGCACTGTCCTACCAAGGCGGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGGTCAGGCACCCCCTTCCCCAGTGGG---gtttcctaggtctgctgttggaaggtagcatgaacctactggcttcaaacagtgcaggtgtggccgggtgcagtagctcacgcctgtaatcccagcactttgggaggccagggtgggcgggtcacaaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccgggtgtggtggcacgcacctgtaatcccagttactcaggaggctgaggcaggagaatt s panTro4.chr19 59034613 407 + 63644993 AGGGAAAGGTGAG----------GGGCGGCCGGGCGTC-----CTCTGGGCCTGGGGTGTCTCTGCAGGGAGAGCCCTCAGCAGGGAG----------------CCCACCCCAGCGAGCACTGTCCTACCAAGGCGGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGGTCAGGCACCCCCTTCCCCAGTGGG---gtttcctaggtctgctgttggaaggtagcatgcacctactggcttaaaacagtgcaggtgtggccgggtgcagtagctcacacctgtaatcccagcactttgggaggccaaggtgggcgggtcacaaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccgggtgtggtggcacgcacctgtaatcccagttactcaggaggctgaggcaggagaatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55912714 411 + 60714840 AGGGAAAGGTGAG----------GGGCGGCCGGGCGTCTTTTCCTCT-GGTCTGGGGTGTCTCTGCGGGGAGAGCCCTCAGCAGGGAG----------------CCCGCCCCAGCGAGCACTGTCCTACCAAGGCCGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGGTCAGGCACCCCCTTCCCCAGTGGG---gtttcctagggctgctgttggaaggtagcatgaacctactggcttaaaacagtgcaggtgtggccgggtgcggtagctcacgcctgtaatcccagcactttgggaggccaaggtgcgtgggttacaaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccgggtgtggtggcatgcgcctgtaatcccagttactcaggaggctgaggcaggagaatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102676221 411 - 106955855 AGGGAAAGGTGAG----------GGGCGGCCGGGCGTCTTTTCCTGT-GGCCTGGGGTGTCTCTGCCAGGAGAGCCCTCAGCAGGGAG----------------CCCACCCCAGCGGGCACCGTCCTACCAAGGCGGAGGCAGTGTTTCTGCCC---ACCCTCCCTGGGGTCAGGAACCCCCTTCCCCAGTGGG---gtttcctaggactgctgttggaaggtagcatgaacctactggcttaaaacagtgcaggtgtggccgggtgcggtagctcacgcctgtaatcccagcacttcgggaggccacggtgggcagatcacaaggtcagg-----------------agtttgagaccagcctggtcaacatggtgaaaccctatctc---------t----accaaaattagcccggtgtggtggcacacacctgtaatcccagttactcaggaggctgaggcaggagaatc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59962034 422 + 64156825 aggggaaggtgagggggggaaaagggcggCCGGGCGTCTTTTCCTCTGGGCCTGGAGTGTCTCTGCGGGGAGAGTCCTCAGCAGGGAG----------------CCCACCCCAGCAAGCACTGTCC-ACCAAGGTAGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGG-CAGGCG-CCCTTTTCCCAGTGGGttcgtttcctagggctgctgttggaaagtagcacaaacctactggcgtaaaacagttttggtttggccgggcgcggtggctctcgcctgtaatcccagcactttgggaggccgaggtgggcggatcataaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccagatgtggtggcacgtacctgtaatcccagttactcaggaggctgaggcaggagaatc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54979671 412 + 59248254 GGGGGAAGGTGAG----------GGGCGGCCGGGCGTCTTTTCCTCTGGGCCTGGAGTGTCTCTGCGGGGAGAGTCCTCAGCAGGGAG----------------CCCACCCCAGCAAGCACTGTCC-ACCAAGGCAGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGG-CAGGCG-CCCTTTTCCCAGTGGGttcgtttcctagggctgctgttggaaagtagcacaaacctactggcgtaaaacagtgcaggtttggccgggcgcggtggctctcgcctgtaatcccagcactttgggaggccgaggtgggcggatcataaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccagatgtggtggcacgtacctgtaatcccagttactcaggaggctgaggcaggagaatc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47095673 428 + 51301725 aggggaaggtgag----------gggCGGCCGGGCATCTTTTCCTCTGGGCCTGGAGTGTCTCTGCGGGGAGAGCCCTCAGCAGGGAGCCCACCCCAGCAAGCACCCACCCCAGCAAGCACTGTCC-ACCAAGGCAGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGG-CAGGTG-CCCTTTCCCCAGTGGGTTcattttctagggctgctgtTGGAAAGTAGCACAAACCTACTGGCGTAAAACAGTGcaggtttggccgggcgcggtggctctcgcctgtaatcccagcactttgggaggccgaggtgggcggatcacaaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccagatgtggtggcacgtacctgtaatcccagttactcaggaggctgaggcaggagaatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46803470 412 + 50890351 gggggaaggtgag----------gggcggCCAGGCGTCTTTTCCTCTGGGCCTGGGGTGTCTCTGTGGGGAGAGCCCTCAGCAGGGAG----------------CCCACCCCAGCAAGCACTGTCC-ACCAAGGCAGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGG-CAGGCG-CCCTTTCCCCAGTGGGttcgtttcctagggctgctgttggaaagtagcacaaacctactggcgtaaaacagtgcaggtttggccgggcgcagtggctctcgcctgtaatcccagcactttggaaggccaaggcaggtggatcacaaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccagatgtggtggcacatacctgtaatcccagttactcaggaggctgaggcaggagaatc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45377443 418 + 49145316 AGGGGAAGGAG-G----------GGGCGGCCGGGCGTCCTTTCCTCTGGGCCTGGGGTGTCTGTGCGGGGAGAGCCC-CAGCAGGGAG----------------CTCACCCCAACAAGCACTGTCCTACCAGGGCAGAGGCAGTGTTTCTGCTG---ACCCTCCCTGGGGTCAGGCG-CCCCTTCCCCAGtgtgttcattccctagggctgctataggaaggtagcacaaacctactggcttaaaacagcacaggtttggctgggcaagttggctcatgcctgtaatcccagcactttgggaggccaaggcaggcagatcacaaggtcagg-----------------agttcgagaccagcctggccaacatggtgaaaccacgtctctattatagat----acaaaaattagtcaggcatgg-ggtgcgcacctgtaatcccagttactctggaaac--aggcaggagaatc i calJac3.chr22 C 0 C 0 s mm10.chr7 3636743 384 + 145441459 AAGGGAAGGTGAG----------GAGAGGACAGGCATCTGTCCCTG-GTGCTTGGGGTCTTTTCATGGGAAGATGCTACTTCAGAGA-----------------CCTCTTCTGACTAGCA------------GACAGA-----TGTGTCTGTCTGCAACCCCTACTGAGGCCA-----TCACATTCTCAG----------CTCTGTATCAGTTATGACAACTCACTATAGATGGAGTAGCTTCATATA----AAAGTTGGCTAGG------------CCTctttaacatcaatactt-gagagacagaggtgggaagatcattagtttgaggcagtctgggttatataagtttcaggccagactgggctgcatagtgaaatcctgtgtt---------tgaaaagaaaaaaAGCCCAgggctggagatgcggctccatcacttcagttcct--gcatgc--aagcatgagaact i mm10.chr7 C 0 I 1444 e canFam3.chr1 19601678 930 - 122678785 I a score=2579485.000000 s hg38.chr19_GL949747v2_alt 101522 902 + 729520 gcttgaacctgggagacggaggttgcagtgaactgagattgcatcattgcactccagcttgggtgacatagcgagactccatctaa-------aaacaaaaacaaaaa------------acagtacaggtttattatctgtggtcctgtaggtcagaagtccaaaatgagtttcactgggctgaagtcagggtgtcatcctggagcgttccttctgggggattcaagggataatccattcccttgtcttttccagcttctaggggtcactggcaccccttagctcgtggccctccctctgtctgcggagccagccacatagcaccctcagacctctctctgactctgcttctgtcttcatatctcggcctctgtttttgttcccctcttctattttaagggcccctgtggctatactgagcctactcagatggtccaggatagtcttcccagctcacaatccttaaaatccttcttaacctcttcacgtcccttttgccctgt---------------gattctgggaattagaacatgggcctctttgggCATGTGTGTGTTGGTGGGGGCGTAATTTGCCTTCCACACCAGGATCTGTCCCCGCTGCAACAGGGGATGTTATTCAAGtaattattcagttaccttctgtcttccttggtagatgtactcgggagaggag--acgttttctgtcttgtgaactgtcgtttgccaagcacccggcctggcacagcgttcaggtgttccgtGTCCC---CTTCTCCTTTCCCTCTCCCCATCTCACCCctggtctgggtgtggggg-tgcagctgtgagtagcacagacaggacccctgccccgtggcgtggacattcttgttggggccgggtcaaagagacagtcaacaggtgaactctgtcctgcgtctagcggtgctaagtcaacaccaagaagaaaaa s panTro4.chr19 59035020 908 + 63644993 gcttgaacctgggagacggaggttgcagtgaactgagattgcatcattgcactccagcttgggtgacatagggagactccatctaa-------aaacaaaaacaaaaa------caaaaaacagtacaggtttattatctgtggtcctgtaggtcagaagtccaaaatgagtttcactgggctgaagtcagggtgtcagcctggagtgttccttctgggggattcaagggataatccattcccttgtcttttccagcttctaggggtcactggcaccccttagctcgtggccctccctctgtctgcggagccagccacatagcaccctcagacctctctctgactctgcttctgtcttcatatctcggcctctgtttt-gttcccctcttctattttaagggcccctgtggctatactgagcctactcagatggtccaggatagtcttcccagctcacaatccttaaaatccttcttaacctcttcacgtcccttttgccctgt---------------gattctgggaattagaacatgggcctctttgggCATGTGTGTGTTGGTGGGGGCGTAATTTGCCTTCCACACCAGGATCTGTCCCCGCTGCAACAGGGGATGTTATTCAAGtaattattcagttaccttctgtcttccttggtagatgtactcgggagaggag--acgttttctgtcttgtgaactgtcgtttgccaagcacccagcctggcacagcgttcaggtgttccgtGTCCC---CTTCTCCTTTCCCTCTCCCCATCTCACCCctggtctgggtgtgggggctgcagctgtgagtagcacagacaggacccctgccccgtggcgtggacattcttgttggggccgggtcaaagagacagtcaacaggtgaactctgtcctgcgtctagcggtgctaagtcaacaccaagaagaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55913125 917 + 60714840 gcttgaacctgggagacagaggttgcagtgaactgagattgcatcattgcactccagcctgggtgacagagcgagactccatctaa-------aaataaaaacaaaaacaaaaacaaaaaacagcgcaggtttattatctgtggtcctgtaggtcagaagtccaaaatgagtttcactgggctgaagtcagggtgtcagcctggagcgttccttctgggggattcaagggataatccattcccttgtcttttctagcttctaggggtcactggcaccccttagctcgtggccctccctctgtctgcggagccagccacatagcactctcagacctctctctgactctgcttctgtcttcatatctcggcctctgtttttgttcccctcttctattttaagggcccctgtggctatactgagcctactcagatggtccaggatagtcttcccagctcacaatccttaaaatccttcttaacctcttcacatcccttttgccctgt---------------gattctgggaattagaacatgggcctccttgggCATGTGTGTGTTGGTGGGGGTGTAATTTGCCTTCCACACCAGGATCTGTCCCCGCTGCAACAGGGGatgttattcaagtaattattcagttatcttctgtctt-cttggtagatgtactcgggagaggag--acgttttctgtcttgtgaactgtcgtttgccaagcacctagcctggcacagcgttcaggtgttcCGTGTCCCCTTCTTCTTCTTTCCCTCTCCCCATCTCACCCctggtctgggtgtggggggtgcagctgtgagtagcacagacaggagccctggcccgtggcgtggacattcttgtgggggccgggtcaaagagacagtcaacaggtgaaccttgtcctgtgtctagcagtgctaagtcaacaccaagaagaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102676632 924 - 106955855 gcttgaacccgggagacagaggttgcagtgaactgagattgcatcattgcactgcagcctgggtgacagagcaagacaccatctaa-------aaaacaaaacaaaac---------aaaacagtgcaggtttattatctgtggtcctgtaagtcagaagtccaaaatgagtttcactgggctgaagtcagggtgtcagcctggagcgttccttctgggggattcaagggataatccattcccttgtcttttccagcttctaggggtcactggcaccccttagctcatggccctccctctgtctgtggagccagccacatagcaccctcagccctctctctgaccctgcttctgtcttcatatctcggcctctgtttt-tctcccctcctctattttaagggcccttgtggctatactgagcctacccagatggtcccggatggtcttcccagctcacagtccttaaaatccttcttaacctcgtcacatccctgttgccctgtgaagtgacattcacagattctgggaattggaacatggacctccttgggCGTGTGTGTGTTGGTGGGGGCGTAATTTGCCTTCCACACCAGGACCTGCCCCCGCTCCAACAGAGGAtgttactcaagtcattattccgttaccttctgtcttccttggtagaggtactcgggagaggagacacgttttctgtcttgtgaactgtcgtttgcctagcacccagcctggcacagcattcaggtgttctgtGTCCCCTTCTTCTCCTTTCCCTCTCCCCACCTCACCCctggtctgggtgtggggg-tgcagctgtgagtagcacagacgggagtcctgccccgtggtgtggacattcttgttggggccgggtcaaagagacagtcaacaggtgaactctgtcctgcgtctagcagtgctaagtcaacaccaagaagagaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59962456 935 + 64156825 gcttgaaccagcgagccagaggttacagtgaactgagattgcaccactgcactccagtctgggtgacagagcgagactccatctaaaagaaa-aaaacaaaacaaaacaaaat-aaaaaaacagtgcaggtttattatctgtggtcctgtaggtcaggagtctaaaataagtttcactaagttgaagtcagggtgtcagcccggagggttccttctaggggagtcaagggataatccattcccttgtc-tttccagcttctaggggtcactggcaccccttagctcgtggccctccctctgtgtgcggagccagctgcatagcaccctcagagctctctctgaccctgcttctgtc-tcatatct-ggcctctgtttttgttcccc-cctctatgttaagggcccttgtggctatactgagcctactcagatggtccaggatagtcttcccagctcacaatccttaatatccttcttaatctcttcacgtcccttttgccctgtgaggtgacattcagaggttctgggaattagaacatggacctccttgggCATGTGTGTGTTGGTGGGGGTATAAtttgtcttccgcaccaggatctgtccccgctgcaacaggggatgttattcaagtaattattcagttacttcctgtcttccttggtagacgtactcgggagaggagacacattttctgtcttgtgaactgtcgtttgccaagcacccagcctggcatggcgttcaaGTGTTCCGTGTCCCCCTCTTCTCCTTTCCCTCTCCCCATCTCACCCctggtctgggtgt-gggggtgcagctgtgagtagcacagacaggagccctgccccgtggcagggacattcttgttggggccgggtcgaggagacagtcaacaggtgaaatctgtcctgcgtctagcggtgctaagtcaacactaagaagaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54980083 936 + 59248254 acttgaaccagcgaggcagaggttacagtgaactgagattgcaccactgcactccagtctgggtgacagagcgagactccatctaaaagaaa-aaaacaaaacaaaacaaaat-aaaaaaacagtgcaggtttattatctgtggtcctgtaggtcaggagtctaaaataagtttcactaagttgaagtcagggtgtcagcccggagggttccttctaggggagtcaagggataatccattcccttgtc-tttccagcttctaggggtcactggcaccccttagctcatggccctccctctgtgtgcggagccagctgcatagcaccctcagagctctctctgaccctgcttctgtc-tcatatct-ggcctctgtttttgttcccc-cctctatgttaagggcccttgtggctatactgagcctactcagatggtccaggatagtcttcccagctcacaatccttaatatccttcttaatctcttcacgtcccttttgccctgtgaggtgacattcagaggttctgggaattagaacatggacctccttgggCATGTGTGTGTTGGTGGGGGTATAAtttgtcttccgcaccaggatctgtccccgctgcaacaggggatgttattcaagtaattattcagttactttctgtcttccttggtagacgtactcgggagaggagacacattttctgtcttgtgaactgtcgtttgccaagcacccagcctggcatggcgttcaaGTGTTCCGTGTCCCCCTCTTCTCCTTTCCCTCTCCCCATCTCACCCctggtctgggtgtggggggtgcagctgtgagtagcacagacaggagccctgccccgtggcagggacattcttgttggggccgggtcgaggagacagtcagcaggtgaaatctgtcctgcgtctagcggtgctaagtcaacactaagaagaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47096101 937 + 51301725 gcttgaaccagcgaggcagaggttacagtgaactgagattgcaccactgcactccagtctgggtgacagagcgagactccatctaaaaaaaacaaaacaaaacaaaacaaaat-aaaaaaacagtgcAGGTTTATTATCTGTGGTCCggtaggtcagaagtctaaaatgagTTTCACTGAGTTGAAGTCAGGGTGTCAGCCCGGAGGGTTCCTTCTGGGGGAGTGAAGGGATAATCCATTCCCTTGTC-TTTCCAGCTTCTAGGGGTCACTGGCACCCCTTAGCTCGTGGCCCTCCCTCTGTGTGCGGAGCCAGCTGCATAGCACCCTCAGACCTCTCTCTGACCCTGCTTCTGTC-TCATATCT-GGCCTCTGTTTTTGTTCCCC-CCTCTATTTTAAGGGCCCTTGTGGCTATACTGAGCCTACTCAGATGGTCCAGGATAGTCTTCCCAGCTCACAATCCTTAATATCCTTCTTAATCTCTTCACGTCCCTTTTGCCCTGTGAGGTGATATTCAGAGGTTCTGGGAATTAGAACATGGACCTCCTTGGgcatgtgtgtgttggtgggggtATAATTTGTCTTCCGCACCAGGATCTGTCCCCGCTGCAACAGGGGATGTTATTCAAGTAATTGTTCAGTTACTTTCTGTCTTCCTTGGTAGACGTACTCGGGAGAGGAGACACATTTTCTGTCTTGTGAACTGTCGTTTGCCAAGCACCCAGCCTGGCATGGCGTTCAGGTGTTCCCTGTCCccctcttctcctttccctctccccatctcacCCCTGGTCTGGGTGTGGGGGGTGCAGCTGTGAGTAGCACAGACAGGAGCCCTGCCCCGTGGCAGCGACATTCTTCTTGGGGCCGGGTCGAGGAGACAGTCAACAGGTGAAATCTGTCCTGCGTCTAGCGGTGCTAAGTCAAcaccaagaagaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46803882 928 + 50890351 gcttgaaccagcgaggcagaggttacagtgaactgagattgcaccactgcactccagtctgggtgacagagcgagactccgtctaa-------aaaacaaaacaaaacaaaataaaaaaaacagtgcaggtttattatctgtggtcctgtagatcagaagtccaaaatgagtttcactgagttgaagtcagggtgtcagcccggagggttccttctgggggagtcaagggataatccattcccttgtcttttccagcttctaggggtcactggcaccccttagctcgtggccctccctctgtgtgcggagccagctgcatagcaccctcagagctctctctgaccctgcttctgtc-tcatatct-ggcctctgtttttgttcccc-cctctatgttaagggcccttgtggctatactgagcctactcaggtggtccaggatagtcttcccagctcacaatccttaatatc---cttaatctcttcatgtcccttttgccctgtgaggtgacattgagaggttctgggaattagaacatggacctccttgggCATGTGTGTGTTGGTGGGGGTATAAtttgccttccgcaccaggatctgtccccgctccaacaggggatgttattcaagtaattattcagttactttctgtcttccttggtagacgtactcgggagaggagacacattttctgtcttgtgaactgtcatttgccaagcacccagcctggcatggcgttcaggtgttctgtGTCCCCCTCTTCTCCTTTCCCTCTCCCCATCTCACCcc-ggtctgggtgttgggggtgcagctgtgagtagcacagacaggagccctgccccgtggcagggacattcttgttggggccgggttgaggagacagtcaacaggtgaaatctgtcctgcgtctagcggtgctaagtcaacaccaagaagaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45377861 870 + 49145316 gcttagacccaggaggcagaggttgcagtgagctgagattccactattgcactccagcctaggtgacagagtgagactccatctaa-------a--------------------aaaaaaccagcacaggtttaccatct--------gtaggtcggaagtccaaaatgggtttcattgggctgaagtcagggtgtcagcccagaggcttccttctgggggact-----------------ccttgccttttccagctgctaggggtcgccggcatcccttagctcgtggcccttcttcc-tttgc-gagccagctgcgcggcaccctcagacctatctc--accctgcttctgtcttcagatcttggcctctgtctt----tccc-catctattttaagggcccttgtggctatactgagcctgctcacatggtccaggatagtcttccgagctcacactccttaaactc---cttaacctcttcacgtcccttttgccctg--aggtgacattcacaggttctgggagttagaacacggacctcctggggCATGTGTGTGTTGGTGGGGGCATAGtttgccttccgcaccaggatctgtcccc-ctccaacaggggatactattcaagtaattattcagttcacttctgtc-tccttggtagatgtactcgggagaggagacatgttttctgtcttgtgaactgttgcttgccaagcaccCCGCCTGGCTCGGCAATCAGGTGTTCCATCTCCCC--CTCCTCCTTTCCCTCTCTCCGTCTCACCCCCGGCctgggtgtagggaatgcagctgtgagtagcgcagaca-gagccctgtcccatggcgtggatactctcactggggccgggttg-ggagacagtccacaggggcaatctgtcctgtgcctagtaggactaggtaaacatcaagaagaaaaa i calJac3.chr22 C 0 I 955 e mm10.chr7 3637127 1444 + 145441459 I e canFam3.chr1 19601678 930 - 122678785 I a score=14287.000000 s hg38.chr19_GL949747v2_alt 102424 7 + 729520 gaaaggg s panTro4.chr19 59035928 5 + 63644993 gaa--gg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914042 7 + 60714840 gaaaggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102677556 7 - 106955855 gaaaggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59963391 7 + 64156825 gaaaggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54981019 7 + 59248254 gaaaggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47097038 7 + 51301725 gaaaggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46804810 7 + 50890351 gaaaggg i chlSab2.chr6 C 0 I 1004 e mm10.chr7 3637127 1444 + 145441459 I e canFam3.chr1 19601678 930 - 122678785 I e calJac3.chr22 45378731 955 + 49145316 I a score=50743.000000 s hg38.chr19_GL949747v2_alt 102431 33 + 729520 ggtggcggt--gaggcagcattaggtgctgattta s panTro4.chr19 59035933 33 + 63644993 ggtggcggt--gaggcagcattaggtgctgattta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914049 33 + 60714840 ggtTGCGGT--GAGGCAACATTAGGTGCTGATTTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102677563 33 - 106955855 ggttggggt--ggggcgacatcaggtgctgattta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59963398 34 + 64156825 ggttggggt-gggggcgacattaggtgctgattta i rheMac3.chr19 C 0 I 1088 s macFas5.chr19 54981026 34 + 59248254 ggttggggt-gggggcgacattaggtgctgattta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47097045 35 + 51301725 ggttggggtggggggcgACATTAGGTGCTGATTTA i papAnu2.chr19 C 0 C 0 e mm10.chr7 3637127 1444 + 145441459 I e canFam3.chr1 19601678 930 - 122678785 I e calJac3.chr22 45378731 955 + 49145316 I e chlSab2.chr6 46804817 1004 + 50890351 I a score=4687.000000 s hg38.chr19_GL949747v2_alt 102464 6 + 729520 actaag s panTro4.chr19 59035966 6 + 63644993 actaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914082 6 + 60714840 ACTAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102677596 6 - 106955855 actggg i nomLeu3.chr10 C 0 I 1118 s macFas5.chr19 54981060 6 + 59248254 cctggg i macFas5.chr19 C 0 I 1349 s papAnu2.chr19 47097080 6 + 51301725 CCTGGG i papAnu2.chr19 C 0 I 1246 e mm10.chr7 3637127 1444 + 145441459 I e canFam3.chr1 19601678 930 - 122678785 I e calJac3.chr22 45378731 955 + 49145316 I e chlSab2.chr6 46804817 1004 + 50890351 I e rheMac3.chr19 59963432 1088 + 64156825 I a score=6650.000000 s hg38.chr19_GL949747v2_alt 102470 26 + 729520 gCACGTGGATACTCGGGGGGTCCGCT s panTro4.chr19 59035972 26 + 63644993 gCACGTGGATACTCGGGGGGCCCACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914088 26 + 60714840 TCACGTGGATACTCGGGGGGCCCACT i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3637127 1444 + 145441459 I e canFam3.chr1 19601678 930 - 122678785 I e calJac3.chr22 45378731 955 + 49145316 I e nomLeu3.chr10 102677602 1118 - 106955855 I e chlSab2.chr6 46804817 1004 + 50890351 I e papAnu2.chr19 47097086 1246 + 51301725 I e macFas5.chr19 54981066 1349 + 59248254 I e rheMac3.chr19 59963432 1088 + 64156825 I a score=3600.000000 s hg38.chr19_GL949747v2_alt 102496 1 + 729520 C s panTro4.chr19 59035998 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914114 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102678720 1 - 106955855 C i nomLeu3.chr10 I 1118 C 0 s rheMac3.chr19 59964520 1 + 64156825 C i rheMac3.chr19 I 1088 C 0 s macFas5.chr19 54982415 1 + 59248254 c i macFas5.chr19 I 1349 C 0 s papAnu2.chr19 47098332 1 + 51301725 C i papAnu2.chr19 I 1246 C 0 s chlSab2.chr6 46805821 1 + 50890351 C i chlSab2.chr6 I 1004 C 0 s calJac3.chr22 45379686 1 + 49145316 C i calJac3.chr22 I 955 C 0 e mm10.chr7 3637127 1444 + 145441459 I e canFam3.chr1 19601678 930 - 122678785 I a score=141690.000000 s hg38.chr19_GL949747v2_alt 102497 46 + 729520 AGAGGAGGCCTGGGTGGGCAGCCCACGCGAGCAGCTGCAGGACCTC s panTro4.chr19 59035999 46 + 63644993 AGAGGAGGCCTGGGTGGGCAGCCCACGCGAGCAGCTGCAGGACCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914115 46 + 60714840 AGAGGAGGCCTGGGTGGGCAGCCCATGTGAGCAGCTGCAGGACCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102678721 46 - 106955855 AGAGGAGGCCTGTGTGGGCAGTCCACGTGAGCAGCTGCAGGACCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59964521 46 + 64156825 AGAGGAGGTCTGGGTGGGCGGCGCACGTGAGCAGCTGCAGGACCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54982416 46 + 59248254 agaggaGGTCTGGGTGGGCGGCGCACGTGAGCAGCTGCAGGACCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47098333 46 + 51301725 AGAGGAGGTCTGGGTGGGCGGCGCACGTGAGCAGCTGCAGGACCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46805822 46 + 50890351 AGAGGAGGCCTGGGTGGGCGGTGCACCTGAGCAGCTGCAGGACCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45379687 46 + 49145316 ACAGGAGGCCTGGGTGGGCAGCCCACGTGAGCAGCAGCAGGACCCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3638571 43 + 145441459 AGATGTTGGCTGAGGGGACAGTTTACATGGCTGGCCACCG---CTT i mm10.chr7 I 1444 C 0 e canFam3.chr1 19601678 930 - 122678785 I a score=1616979.000000 s hg38.chr19_GL949747v2_alt 102543 416 + 729520 CCCCTC------GCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTCGACAAGTGGCAGGAGCCGCCGCCTGTGAAGCAGGTGAAGCCGCTGCCTGCGCCCCTGGATGGACAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCGGTAGGCATGGGGGTCATGGAGGGGAGAAGCCGGCGTCCTCCTCCCAGCCGACTC-------CCTGGCGCCGCCCACCCAC-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACGGAGATCCGGAAGCAGGCCAACCGTATGAGCTTCGGAGAGGTCAGACT---CCCAGAGCGC-----cctc--------ctcaaccccacagccagccagccgccaccgccctctgcctcctgccaccgccCCTCCTCTC-GTCCTGTGGCC s panTro4.chr19 59036045 422 + 63644993 CCCCTCCCCCTTGCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTCGACAAGTGGCAGGAGCCGCCGCCCGTGAAGCAGGTGAAGCCGCTGCCTGCGCCCCTGGATGGACAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCAGTAGGCATGGGGGTCATGGAGGGGAGAAGCTGGCGTCCTCCTCCCAGCTGACTC-------CCTGGCGCCGCCCACCCAC-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACGGAGATCCGGAAGCAGGCCAACCGTATGAGCTTCGGAGAGGTCAGACT---CCCAGAGCGC-----CCTC--------CTCAACCCCACAGGCAGCCAGCCGCCACTGCCCTCTGCCTCCTGCCACCGTCCCTCCTCTC-GTCCCTTGGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914161 416 + 60714840 CCCCTC------GCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTCGACAAGTGGCAGGAGCCGCCGCCCGTGAAGCAGGTGAAGCCGCTGCCTGCGCCCCTGGATGGGCAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCAGTAGGCATGGGGGTCACGGAGGGGAGAAGCCGGCGTCCTCCTCCCAGCTGACTC-------CCTGGCACCGCCCGCCCAC-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACAGAGATCCGGAAGCAGGCCAACCGTATGAGCTTCGGAGAGGTCAGACT---CTCAGAGCGC-----CCTC--------CTCAACCCCACAGGCAGCCAGCCGCCACTGCCCTCTGCCTCCTGTCACCGTCCCTCCTCTC-GTCCTGTGGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102678767 416 - 106955855 CCCCTC------GCCCTCCCTAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTCGACAAGTGGCAGGAGCCGCCGCCTGTGAAGCAGGTGAAGCCGCTGCCTGCGCCCCTGGATGGGCAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCAGTAGGCATGGGGGTCATGGAGGGGAAAGGCCGGCGTCCTCCTCCCAGCTGACTC-------CCTGGCACCGCCCGCCCAC-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACAGAGATCCGGAAGCAGGCCAACCGTATGAGCTTCGGAGAGGTCAGACT---CCCCCAGCGC-----CCTC--------CTCACCCCCACAGGCAGGCAGCCGCCACTGCCCTCTGCCTCCTGCCGCCGTCCCTCCTCTC-GTCCTGTGGCC i nomLeu3.chr10 C 0 M 163 s rheMac3.chr19 59964567 415 + 64156825 CCCCTC------GCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTTGACAAGTGGCAGGAGCCCCCCCCCGTGAAGCAGGTGAAGCCACTGCCTGCGCCCCTGGATGGGCAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGAGGCCC-GGGGGTCCAGTAGGCGTGGGGGTCATGGAGGGGAGAGGCCAGCGTCCTCCTCCCAGCTGACTC-------CCTGGCACCGCCCGCCCAT-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACAGAGATCCGGAAGCAGGCCAACCGGATGAGTTTCGGAGAGGTCAGACT---CCCCCAGCGC-----CCTC--------CTCACCCCCACAGGCAGCCAGCCGCCACCGCCCTCTGCCTCCTGCCACCGTCCCTCCTCTC-GTCCTGTGGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54982462 415 + 59248254 CCCCTC------GCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTCGACAAGTGGCAGGAGCCCCCCCCCGTGAAGCAGGTGAAGCCACTGCCTGCGCCCCTGGATGGGCAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGAGGCCC-GGGGGTCCAGTAGGCGTGGGGGTCATGGAGGGGAGAGGCCAGCGTCCTCCTCCCAGCTGACTC-------CCTGGCACCGCCCGCCCAT-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACAGAGATCCGGAAGCAGGCCAACCGGATGAGTTTCGGAGAGGTCAGACT---CCCCCAGCGC-----CCTC--------CTCACCCCCACAGGCAGCCAGCCGCCACCGCCCTCTGCCTCCTGCCACCGTCCCTCCTCTC-GTCCTGTGGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47098379 417 + 51301725 CCCCTC------GCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAACGCAAATTTGACAAGTGGCAGGAGCCGCCCCCCGTGAAGCAGGTGAAGCCGCTGCCTGCGCCCCTGGATGGGCAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCAGTAGGCGTGGGGGTCATGGAGGGGAGAGGCCGGCGTCCTCCTCCCAGCTGACTC-------CCTGGCACCGCCCGCCCACACCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACAGAGATCCGGAAGCAGGCCAACCGGATGAGTTTTGGAGAGGTCAGACT---CCCCCAGCGC-----CCTC--------CTCACCCCCACAGGCAGCCAGCCGCCACcgccctctgcctcctgccaccgtCCCTCCTCTC-GTCCTGTGGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46805868 413 + 50890351 CCCCTC------GCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTCGACAAGTGGCAGGAGCCGCCCCCCGTGAAGCAGGTGAAGCCGCTGCCTGCGCCCCTGGACGGGCAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCGGTAGGCATGGGGGTCATAGAGGGGAGAGGCCGGCG---TCCTCCCAGCTGACTC-------CTTGGCACCGCCTGCCCAC-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACAGAGATCCGGAAGCAGGCCAACCGGATGAGTTTTGGAGAGGTCAGACT---CCCCCAGCGC-----CCTC--------TTTACCCCCACAGGCAGCCAGCCGCCACCACCCTCTGCCTCCTGCCACTGTCCCTCCTCTC-GTCCTGTGGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45379733 423 + 49145316 CCCCTTGCTCTCACCCTCCCTAGGTGGGCTACGAACTCAAGGACGAGATCGAGCGCAAGTTTGACAAGTGGCAGGAGCCGCCGCCTGTGAAGCAGGTGAAACCACTGCCTGCGCCCCTGGATGGGCAGCGGAAGAAGCGAGGTGGCCGCAGGTGAGAGCCCCTGGGGGTCCAGTAGGCATGGGGGTCGTGGAGTGGAGGAGCCGGTG---TCCCCCCAGCTGACTC-------CCTGGTACCGCCTGCCCAC-------CCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACCGAGATCCGGAAACAGGCTAACCGCATGAGCTTCGGAGAGGTTAGATG---CCCCTAGCGCTGAAGCCATGAGGAGAACTCACGGCCACAGG----CAGCCGCCGCCGCCCCCTGCCTCCCACCGCCTTCCCTCCTCTCTGCCCTGTGGCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3638614 405 + 145441459 CTCAAC-------TCCCCCCTAGGTGGGCTACGAACTAAAGGATGAGATTGAGCGCAAATTTGATAAGTGGCAGGAGCCACCACCCGTGAAGCAGGTGAAGCCCCTGCCTGCACCCCTTGATGGGCAGCGGAAGAAGCGAGGGGGCCGAAGGTAAGGAGTTCTGATGGGGCTAGACGTTTGGAAGTGGGGAAGGGAAACAACT-------TCTTCCCAGCCAGCTCCCTATATCCTGTTAACACCCACTTGC------CCTAGGTACCGCAAGATGAAGGAACGGCTAGGACTGACGGAGATCCGGAAGCAGGCCAACCGCATGAGCTTTGGAGAGGTCAGGCTTGATCCACAGTAC-----CAGT--------GGGACCATATTAGG---------GTCTTCTCTCTGCACATCCTGCTGCCATCCCTCCTCCCCACCCTGTAATC i mm10.chr7 C 0 C 0 s canFam3.chr1 19602608 349 - 122678785 CCCCCT------GCCCTCCCCAGGTGGGATATGAGCTGAAGGATGAAATCGAGCGCAAGTTTGACAAATGGCAGGAGCCGCCGCCCGTGAAGCAGGTGAAGCCCCTGCCTGCACCCCTGGACGGGCAGCGCAAGAAGCGAGGTGGCCGCAGGT---AGGCCCTGAGGG-CCAGTGGGGGTGAAG---AGGAGGGGAAGGGGCTTGTGAC-----CCCAGCTGAC-C-------CCTGGCGC------------CCCTCCCCAGGTACCGCAAGATGAAGGAGCGGCTAGGGCTGACCGAGATCCGGAAGCAGGCCAACCGCATGAGCTTCGGAGAGGTCAAA-----GCCTTAGTCT-----GGAT--------GTCCCCACCACA----------------------------------------TTTCTTCTC-GG-CTGAGGCA i canFam3.chr1 I 930 C 0 a score=237876.000000 s hg38.chr19_GL949747v2_alt 102959 126 + 729520 CTGGCTCATGTCTAGGGCGCTGCCCCAGCCTCCTCCC-----CCCCGGCCTCTATTCTCGTTTCCATCCATTCAGCCCCAAAGCGACCCTCGCGGCCCTTGGAGCCTGTGTCTCCGCTGCTTAGAGCCCCC s panTro4.chr19 59036467 131 + 63644993 CTGGCTCATGTCTAGGGCGCTGTCCCAGCCTCCTCCCTCATCCCCCGGCCTCTATTCTCATTTCAATCCATTCAGCCCCAAAGTGACCCTTGCAACCCTCGGAGCCTGTGTCTCCGGTGCTTAGAACCCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914577 129 + 60714840 CTGGCTCATGTCTAGGACACTGTCCCAGCCTCCTCCCTCATCCCCCGGCCTC--TTCTCGTGTCCATCCATTCAGCCCCAGAGTGACCCTTGTAACCTGCGGAGCCTGTGTCTCCGGCGCTTAGAGCCCCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59964982 130 + 64156825 CTGGCTCATGTCTAGGGTGCTGTACCAGCCTCTTCCCTCATCCCCCAGCCTCTACTCTCATTTCCATCCATTCAGCCCCAAAGTGACCCTTGTAACCCTGGGAGCCTGTGTCTCCCGCGCTTAGAG-CCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54982877 131 + 59248254 CTGGCTCATGTCTAGGGTGCTGTACCAGcctcttccctcatcccccagcctctactctcatttccatccattcagcccCAAAGTGACCCTTGTAACCCTGGGAGCCTGTGTCTCCCGCGCTTAGAGCCCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47098796 131 + 51301725 CTGGCTCATGTCTAGGGTGCTGTCCCAGCCTCTTCCCTCATCCCCCAGCCTCTACTCTCATTTCCATCCATTCAGCCCCAAAGTGACCCTTGTAACCCTGGGAGCCTGTGTCTCCTGCGCTTAGAGCCCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46806281 130 + 50890351 CTGGCTCATGTCTAGGGTGCTGTCCCAGCCTCTTCCCTCAT-CCCCAGCCTCTACTCTCATTTCTATCCATTCAGCCCCAAAGTGACCCTTGTAACCCTGGGAGCCTGTGTCTCCTGCGCTTAGAGCCCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45380156 89 + 49145316 CTGGCTCATGTCTAGGGCACGA--------------------TCCTGGCCTCTACTCTGGTTTCTATCCATTCAGCCCCAAAGTGACCCTTGTCACC----------------------CTCAGAGTCCCT i calJac3.chr22 C 0 C 0 s mm10.chr7 3639019 109 + 145441459 TGAGAGCAGATCTGGGG--CTACCCAACCCTCCTCCCTCTT-GTCTAGCCTCTCCTCTTA-----AACCA-CCTTCTCCATGGTGATCTTTGCAGCTCTCAGCTGGCTGGCTTCCCAC------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19602957 86 - 122678785 ----------------------------GCACCTCAC-----CTCCAGCCTC--CCCCCACATCCATGTA-----CCCTGAAGGGACCTATGCAGCATTCAG----TGTTGGCCCTGTCCCCCGACCCCC- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102679183 163 - 106955855 M a score=89498.000000 s hg38.chr19_GL949747v2_alt 103085 27 + 729520 GCGGCTTCCCATCGCCCCGGGCTCCTT s panTro4.chr19 59036598 27 + 63644993 GCAGCTTCCCATCGCCCCAGACTCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914706 27 + 60714840 GCAGCTTCCCATTGCCCCAGGCTCCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102679346 27 - 106955855 GCAGCTTCCCATCGCCCCAGGCTCCTT i nomLeu3.chr10 M 163 C 0 s rheMac3.chr19 59965112 27 + 64156825 GCAGCTTCCCATCGCCCCGGGCTCCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54983008 27 + 59248254 GCAGCTTCCCATCGCCCCGGGCTCCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47098927 27 + 51301725 GCAGCTTCCCATCGCCCCAGGCTCCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46806411 27 + 50890351 GCAGCTTCCCATTGCCCCAGGCTCCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45380245 27 + 49145316 GCTGCTTCCCATCACCCCAGGCTCCTC i calJac3.chr22 C 0 C 0 s mm10.chr7 3639128 19 + 145441459 GCAGCT--------CTCCAGGCTGCTT i mm10.chr7 C 0 I 241 s canFam3.chr1 19603043 22 - 122678785 -----ACCCTTTTGTACACACCTCCCT i canFam3.chr1 C 0 C 0 a score=487033.000000 s hg38.chr19_GL949747v2_alt 103112 174 + 729520 GGCCGGTTCCTCCCTGCCCAGAGGCTCCTTAGTGCCCTGCTGCACGGCCGCCCCGTCCCTGGGCCCCGCCAGTCTCCTCTGTTATCCCAGCGTCAT-CCCCTTGGTCCTGCAGGACCGAACTCAGAGGCCACCTCATCCTATTAAACCTGTTCTGGTTCCTGACATCCCCCGACC s panTro4.chr19 59036625 174 + 63644993 GGCCGGTTCCTCCCTGCCCAGAGGCTCCGCAGTGCCCTGCTGCACGGCCGCCCCGTCCCTGGGCCCCGCCAGTCTCCTCTGTTACCCCAGCGTCAT-CCCCTTGGTCCTGCAAGACCGAACTCAGAGGCCACCTCATCCTATTAAACCTGTTCTGGTTCCTGGCATCCCCCGACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914733 174 + 60714840 GGCCTGTTCCTCCCTGCCCAGAGGCTCCGCAGTGCCCTGCTGCACGGCCGCCCCGTCCCTGGGCCCTGCCAGTCTCCTCTGTTATCCCAGCGTCAT-CCCTTTGGTCCTGCAAGACCGAACTCAGAGGCCACTTCATCCTATTAAACCTCTTCTGGTTCCTGACATCCCCCAACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102679373 168 - 106955855 TGCCGGT--CTCCCTG-CCAGAGGCTCCGCGGTGACCTGCTGCACTGCCG-CCCGTCCCTGGG-CCTGCCAGTCTCCTCTGTTATCCCAGCATCAT-CCCCTTGGT-CTGCAAGACCCAATTCAGAGGCCATCTCATCCTATGAAACCTATTCTGGTTCCTGACACCCCCCAACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59965139 173 + 64156825 GGCTGGTTCCTCCCTGCCCAGAGGCTCCGCAGTGCCCTGCTGCACCGCCG-CCCGTTCCCGGGCCCCGCCAGTCtcccctgttatcccaacgtcat-ccccttggtcctgcaagacccaactcagaggccacctcatcctatgaaacctgttctggttccTGACACCCCCCAATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54983035 174 + 59248254 GGCTGGTTCCTCCCTGCCCAGAGGCTCCGCAGTGCCCTGCTGCACCGCCGCCCCGTTCCCGGGCCCCGCCAGTCTCCTCTGTTATCCCAACGTCAt-ccccttggtcctgcaagacccaactcagaggccacctcatcctatgaaacctgttctggttccTGACACCCCCCAATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47098954 175 + 51301725 GGCCGGTTCCTCCCTGCCCAGAGGCTCTGCAGTGCCCTGCTGCATGGCCGCCCCGTTCCTGGGCCCCGCCAGTCTCCTCTGTTATCCCAACATCATCCCCCTTGGTCCCGCAAGACCCAACTCAGAGGCCACCTCATCCTATGAAACCTGTTCTGGTTCCTGACACCCCCCAATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46806438 174 + 50890351 GGCCGGTTCCTCCCTGCCCAGAGGCTCTGCAGTGCCCTGCTGCATGGCCGCCCCGTTCCTGGGCCCCGCCAGTCTCCTCTGTTATCCCAACGTCAT-CCCCTTGGTCCTGCAAGACCCAACTCAGAGGCCACCTCATCCTATGAAACCTGTTCTGGTTCCTCACACCCCCCAATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45380272 150 + 49145316 GGCCAGTTTCTCC-------------------TGCCCT-CTGCACGGCCCCTCCCTCCGTGAGCCCC----GTCTCCTCCGTTATCCCAGTGTCAT-CCCCTTGGTCCTGCAAGACCCAGCTCAGAGGCCACCTCATCCTGTGGAACCTGTTCTGGTTCCAGACACCCCCCAACC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19603065 145 - 122678785 -GTCGGGTTGGATCTGCCCAGGG-------AGGGTCCTTCCTCA-GGCTTCACC----------TCTGCCAGACTC----ATTACCCAAGCATCAT-CCTCATGGTCCTGCAAGAACCAGCTCAAACACCCTCTAGTCA-GCAAGCCCAGTTTTGGTTGTTGACACTGCA----- i canFam3.chr1 C 0 C 0 e mm10.chr7 3639147 241 + 145441459 I a score=4046664.000000 s hg38.chr19_GL949747v2_alt 103286 1248 + 729520 CACACGAGTAAGGAAGGAATGGCCTCCCAACTCTGAGCTCACAGAGCAGTGCTGGGACCGGGCCCCTCTCAGGCTCCCCGGCATCCCCCGCGTGTGTGGGCCCCCAGGCCTCAGCCGGGCCGAGTGGGTACCGGAGCAGGTGCCCGTGGGACCGGCCGGCTGGTGACCGCTGGGCTTCCGGCTGGTGGAGGGGGTGCCTCGGTGG-CTGGAGGGCAGGGCCTGGTCGCTGAACTGCAGGGCGCCTCCTCTTCCCCCTAGATCGAGGAGGACGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGTGTGCGGCAGACACAGGTAAACGAGGCCACCAAGGCCAGGATCTCCAAGACGCTGCAGGTATGGGCCAGACCCAGGTGGGGCTGGGGACCGA--GGGACACAAGGTGGGGGGAGCCCAGATC--------GCAGCCT---CCCTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGCGTCGTATATGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTCCCCTGGGccggctctgtccccagccct-----gagaccttggcaaggccccttgccctctgcccctgtgaagaaggccaggatgagtctcctcatggggctgttgtggagggtgtggtg-----acgaggtat-gcagagga-cgtaga-cagctcctggcacacaggaa------gaggttagcagaGACGAGAGCCCAGCGCTGAGCAGTC--CTCGTGAGCACGCACTG-CTTTAGAACCAGGCCCACAGCTGTGTTCAGGGCACCCAGTTCCTCTGTC--GGGCTGTGAGCGGGTA--ACACTGCTCAGCCTCCAGGCCCTCCAGTTCAAAACGGCCAGGACGGTTAAGGTAACCTCAGGACCCCACTCGAGAAAGTTCCCGGCTAGGCGGGCTTGGATGTCAAGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGCAGCGTGGAGCATGGCAGTCACCGCATC-GTCGGAGCCTCGGTT----TACCATCCACAGAGCAGGGCGAGCCTGCACCACGGAG--GCGAG-ACAGCAGC-GAGCTCATCTGCCcagtcagcgggtgtctacgcagcacctgctgagttctgtcagtgttcccggctctggggatgaagcaacga--atgag--agacaagtcttaccttcttggagccagt-gggtggccgggcgcagacagctcagtaagatgtccagtgtagg s panTro4.chr19 59036799 1248 + 63644993 CACACGAGTAAGGAAGGAATGGCCTCCCAACTCTGAGCTCACAGGGCAGTGCTAGGACCGGGCCCCTCTCAGGCTCCCCAGCATCCCCCGCTTGTGTGGGCCCCCAGGCCTCAGCCGGGCCGAGTGGGTACCGGAGCAGGTGCCCGTGGGACCGGCCGGCTGGTGACCGCTGGGCTTCCGGCTGCTGGAGGGGGTGCCTCGGTGG-CTGGAGGGCAGGGCCTGGTCGCTGAACTGCAGGGCGCCTCCTCTTCCCCCTAGATCGAGGAGGACGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGTGTGCGGCAGACGCAGGTAAACGAGGCCACCAAGGCCAGGATCTCCAAGACGCTGCAGGTATGGGCCAGACCCAGGTGGGGCTGGGGACCGA--GGGACACAAGGTCGGGGGAGCCCAGATC--------GCAGCCT---CCCTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGCGTCGTGTATGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTCCCCTGGGccggctctgtcctcagccct-----gagaccttggcaaggccccttgccctctgcccctgtgaagaaggccaggataagtctcctcagggggctgttgtggagggtgtggtg-----acgaggtat-gcggagga-cgtaga-cagctcctggcacacaggaa------gaggttagcagaGACGAGAGGCCAGCGCTGAGCAGTC--CTCGTGAGCACGCACTG-CTTCAGAACCAGGCCCACAGCTGTGTTCAGGGCACCCAGTTCCTCTGTC--GGGCTGTGAGCGGGTT--ACACTGCTCAGCCTCCAGGCCCTCCAGTTCAAAATGGCCAGGACGGTTAAGGTAACCTCAGGACCCCACTCGAGAAGGTTCCCGGCTAGGCGGGCTTGGATGTCAAGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGCAGCGTGGAGCGTGGCAGTCACCGCATC-GTCGGAGCCTCGGTT----TACCATCCACAGAGCAGGGCGAGCCTGCACCATGGGG--GCGAG-ACAGCAGC-GAGCTCATCTGCCcagtcagcgggtgtctacgcagcacctgctgagttccatcggtgtccccggctctggggatgaagcgacga--atgag--agacaagtcttaccttcttggagccagt-gggtggccgggcacagacagctcagtaagatgtccagtgtagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914907 1250 + 60714840 CACACAAGTAAGGAAGGAATGGCCTCTCAACTCTGAGCTCACAGAGCAGTGCTAGGACCGGGCCCCTCTCAGGCTCTCCAGCATACCCCGCTTGTGGGGGCCCCCAGGCCTCAGCCGGGCTGAGTGGGTACCTGAGCAGGTGCCCGTGGGACCAGCCGGCTGGTGACCGCTGGGCTTCCGGCTGGTGGAGGGGATGCCTCGGTGG-CTGGAGGGCAGGGCCTGGTCGCTGAACTGCAGGGCGCCTCCCCTTCTCCCTAGATCGAGGAGGATGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGTGTGCGGCAGACGCAGGTAAACGAGGCCACCAAGGCCAGGATCTCCAAGACGCTGCAGGTATGGGCCAGAACCAGGTGGGGCTGGGGACCAA--GGGACACAAGGTTGGGGGAGCCCAGATC--------GCAGCCT---CCCTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGCGTCGTGTACGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTCCCCTGGGctggctctgtccctggcccc-----gagaccttggcaaggccccttgccctctgcccctgtgaagcaggccaggatgagtcccctcacggggctgttgtggagggtgtggtg-----acgaggtat-gcagagga-cgtagg-cagctcctggcacacaggaa------gaggttagcagaGACGAGAGGCCAGCGCTGAGCAGTC--CTCGTGAGCACGGACCG-CTTTAGAACCAGGCCCACAGCTGTGTCCAGGGTGCCCATTTCCTCTCTCTGGGGCCTTGAGCGGGTT--ACAGTGCTCAGCCTCCAGGCCCTCCAGTTCAAAATGGCCAGGACGGTTAAGGTAACCTCAGGACCCCACTCAAGAAAGTTCCTGGCTAGGTGGGCTTGGATGTCACGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGCAGCGTGGAGCATGGCAGTCACCGCATC-GTCGGTGCCTCGGTT----CACCATCCACAGAGCAGGGCCAGCCTGCACCATGGGG--GCGAG-ACAGCAGC-CAGCTCatttgctgagtcagcgggtgtctatgcagcacctactgagttctatcggtgttgccggctctggggatgaagcgatga--atgag--agacaagtcttaccttcatgcagccagt-gggtggccgggcacagacagctcagtaagatgtccagtgtagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102679541 1250 - 106955855 CACACGACTAAGGAAGGAATGGCCTCTCAACTCTGAGCTCACAGAGCAATGCTCGGACCGGGCCCCTCTCAGGCTCCCCAGCATCCCCCGCTTGTGGGGGCCCCCAGGCCTCAGCCGGGCCGAGTGGGTACCTGAGCAGGTGCCCATGGGACCAGCCGGCTGGTGACCGCTGGGCTTCCGGCTGCTGGAGGGGGTGCCTCGGTGG-CTGGAGGGCAGGGCCTGGTCGCTGAACTGCAGGGCGCTTCCCCTTCCCCCTAGATCGAGGAGGACGCCTACCAGGAGGATCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGCGTGCGGCAGACGCAGGTAAACGAGGCCACCAAGGCCAGGATCTCCAAGACGCTGCAGGTATGGGCCAGACCCAGGTGGGGCTGGGGACCGA--GGGACACAAGGTGGGGGGAGTCCAGATC--------GCAGCCT---CCTTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGTGTCGTGTACGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA-----------------------CTCCCCTGGGCCGGCTCTGTCCCCAACCC------GAGACCTCCGCAAGGCCCCTTGCCCTCTGCCC--GTGAAGCAGGCCAGGATGAGTCCCCTCACGGGACTGTTGGGGAGGGTGTGGTG-----ACGAGGTAC-GCAGAGGA-CGTAGA-CAGCTCCTGGCACACAGGAA------GAGGTTGGCAGAGACgaggggccagcgctgagcagtc--cccatgagcacggacca-ctttagaaccaggcccacagctgtgttcagggcacccagctcctctctgtggggccatgagcgggttacacactgctcagcctccaggccctccagttcaaaatggCCAGGGCGGTTAAGGTAACCTCAGGACCCCATTCGAGAAAGTTCCCGGCTAAGTGGGCGTGGATGTCACGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGCAGCGTGGAGCATGGCAGTCACCGCATC-GTCAGTGCCTCAGTT----TACCATCCACAGAGCAGGGCGAGCCTGCACCATGGGG--GCGAG-ACAGCAGC-GAGCTCatttcctcagtcaacgggtgtctgtgcagcacctactgagttccatcggtgttctcggctctggggatgaggcgatga--atgagacagccaagtcttagcttcatggagccagt-gggtggccgggcatagacagctcagtaagatgtccagtgtagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59965312 1246 + 64156825 CACACGAGGAAGGAAGGAATGGCCTCTCGACTC--AGCTCACAGAGCAGTGCTAGGACCCGGCCCCTCTCAGGCTCCCCAGCATCCCCCGCTTGTGGGGGCCCTCAGGCCTCAGCCGGGCCAAGTGGGTACCTGAGCAGGTGCCCGTGGGACCAGCCGGCTGGTGACTGCTAGGCTTCCAGCTGGTCGAGGGGGTGCCTCAGTGG-CTGGAGGGCAGGGCCTGGTCACTGAATTGCAGGGTGCCTCCCCTTCCTCCTAGATTGAGGAGGACGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGCGTGCGGCAGACGCAGGTCAACGAGGCCACCAAGGCGAGGATCTCCAAGACGCTGCAGGTATGGGCCAGACCTGGGTGGGGCTGGGGACCGA----GACACAGGGTGGGGGGAGCCCAGATC--------GCAGCCT---CCCTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGCGTTGTGTACGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTGCCCTGGGCCGGCTCTGTCCCCAGCCCC-----AACACCTTGGCAAGGCCCCTTGCCCTCTGCCCCTGTGAAGCC-GCCAGGATGAGTCCCCTCACGGGGCTGTCGTGGAGGGCGTGGTG-----ACGAGGTAT-TCAGAGGA-CGTAGA-CAGCTCCTGGCACACAGGAA------GAAGTTAGCAGAGACGAGAGGCCAGTGCTGAGCAGTC--CTCATGAGCACGGACCG-CTTTAGAACCAGGCCCACAGCTGTGTCCAGGGCATCCAGTTCCTCTCTGTGGGGCTGTGAGCTGGTT--ACACTGCTCAGCCTCCAGGCCTTCCAGTTGAAAATGGCCAGGGCGGTTAAGGTAACCTCAGGACCCCACTTGAGAAAGTTCCCGGCTAGGTGAGCTTGGATGTCACGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGTGGCGTGGAGCATGGCAGTCACCGCATC-GTCGGAGCCTCGGTT----TACCATCCACAGAGCAGGGCGAGCCTGCA-CGTGGGG--CCAAG-ACAGCAGC-GAGCTCatttgctcagtccgcggatgtctgtggagcacctactgagttccatcggtgttcccagctctggggatgaagcgatga--atgagagagacaagtcttaccttcagggagccagt-gggtggccgggcacagacagctcagtaggatgtctaatgtagt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54983209 1247 + 59248254 CACACAAGGAAGGAAGGAATGGCCTCTCGACTC--AGCTCACAGAGCAGTGCTAGGACCCAGCCCCTCTCAGGCTCCCCAGCATCCCCCGCTTGTGGGGGCCCTCAGGCCTCAGCCGGGCCAAGTGGGTACCTGAGCAGGTGCCCGTGGGACCAGCCGGCTGGTGACTGCTAGGCTTCCAGCTGGTCGAGGGGGTGCCTCAGTGG-CTGGAGGGCAGGGCCTGGTCACTGAATTGCAGGGTGCCTCCCCTTCCTCCTAGATTGAGGAGGACGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGCGTGCGGCAGACGCAGGTCAACGAGGCCACCAAGGCGAGGATCTCCAAGACGCTGCAGGTATGGGCCAGACCTGGGTGGGGCTGGGGACCGA----GACACAGGGTGGGGGGAGCCCAGATC--------GCAGCCT---CCCTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGCGTTGTGTACGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTGCCCTGGGCCGGCTCTGTCCCCAGCCCC-----AACACCTTGGCAAGGCCCCTTGCCCTCTGCCCCTGTGAAGCCGGCCAGGATGAGTCCCCTCACGGGGCTGTCGTGGAGGGCGTGGTG-----ACGAGGTAT-TCAGAGGA-CGTAGA-CAGCTCCTGGCACACAGGAA------GAAGTTAGCAGAGACGAGAGGCCAGTGCTGAGCAGTC--CTCATGAGCACGGACCG-CTTTAGAACCAGGCCCACAGCTGTGTCCAGGGCATCCAGTTCCTCTCTGTGGGGCTGTGAGCTGGTT--ACACTGCTCAGCCTCCAGGCCTTCCAGTTGAAAATGGCCAGGGCGGTTAAGGTAACCTCAGGACCCCACTCGAGAAAGTTCCCGGCTAGGTGAGCTTGGATGTCACGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGTGGCGTGGAGCATGGCAGTCACCGCATC-GTCGGAGCCTCGGTT----TACCATCCACAGAGCAGGGCGAGCCTGCA-CGTGGGG--CTGAG-ACAGCAGC-GAGCTCatttgctcagtccgcggatgtctgtggagcacctactgagttccatcggtgttcccagctctgggaatgaagcgatga--atgagagagacaagtcttaccttcagggagccagt-gggtggccgggcacagacagctcagtaggatgtctaatgtagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47099129 1244 + 51301725 CACacgaggaaggaaggaatggccTCTTGACTC--AGCTCACAGAGCAGTGCTAGGACCCGGCCCCTCTCAGGCTCCCCAGCATCCCCCGCTTGTGGGGGCCCTCAGGCCTCAGCCGGGCCAAGTGGGTACCTGAGCAGGTGCCCGTGGGACCAGCCGGCTGGTGACTGCTGGGCTTCCAGCTGGCCGAGGGGGTGCCTCAGTGG-GTGGAGGGCAGGGCGTGGTCACTGAACTGCAGGGTGCCTCCCCTTCCTCCTAGATTGAGGAGGACGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGCGTGCGGCAGACGCAGGTCAACGAGGCCACCAAGGCGAGGATCTCCAAGACGCTGCAGGTATGGG-CAGacctgggtggggctggggaccGA----GACACAGGGTGGGGGGAGCCCAGATC--------GCAGCCT---CCCTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGCGTCGTGTACGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTGTCCTGGGCCGG--CTGTCCCCAGCCCC-----AAGACCTTGGCAAGGCCCCTTGCCCTCTGCCCCTGTGAAGCCGGCCAGGATGAGTCCCCTCACAGGGCTGTCGTGGAGGGCGTGGTG-----ACGAGGTAT-TCAGAGGA-CGTAGA-CAGCTCCTGGCACACAGGAA------GAGGTCAGCAGAGACGAGAGGCCAGTGCTGAGCAGTC--CTCGTGAGCACGCACCG-CTTTAGAACCAGGCCCACGGCTGTGTCCAGGGCATCCAGTTCCTCTCTGTGGGGCCGTGAGCTGGTT--ACACTGCTCAGCCTCCAGGCCTTCCAGTTCAAAATGGCCAGGGCGGTTAAGGTAACCTCAGGACCCCACTCAAGAAAGTTCCCGGCTAGGTGGGCTTGGATGTCACGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGTGGCGTGGAGCATGGCAGTCACCGCATC-GTCGGAGCCTCGGTT----TACCATCCACAGAGCAGGGCGAGCCTGCA-CATGGGG--GCGAG-ACAGCAGC-GAGCTCATTTGCTCAGTCCGTGGATGTCTGTGGAGCACCTACTGAGTTCCATCGGTGTTCCCAGCTCTGGGGATGAAGCGATGA--ATGAGAGAGACAAGTCTTACCTTCAGGGAGCCAGT-GGGTGGCCGGGCACAGACAGCTCAGTAGGATGTCCAATGTAGT i papAnu2.chr19 C 0 T 39 s chlSab2.chr6 46806612 1238 + 50890351 CACACAAGTAAGGAAGGAATGGCCTCTCGACTC--AGCTCACAGAGCAGTGCTAGGACCTGGCCCCTCTCAGGCTCCCCAGCATCCCCCGCTTGTGGGGGCCCTCAGGCCTCAGCCGGGCCAAGTGGGTACCTAAGCAGGTACCCGTGGGACCAGCCGGCTGGTGACTGCTAGGCTTCCAGCTGGTCAAGGGGGTGCCTCAGTGG-CTGGAGGGCAGGACCTGGTCACTGAACTGCAGGGTGCCTCCCCTTCCTCCTAGATTGAGGAGGACGCCTACCAGGAGGATCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGCGTGCGGCAGACGCAGGTCAACGAGGCCACCAAGGCGAGGATCTCCAAGACACTGCAGGTATGGGCCAGACCTGGGTGGGGCTGGGGACCGA----GACACAGGGTGGGGGAAGCCCAGATC--------GCAGCCT---CTCTGTCCTCCCCACAGCGGACCCTGCAGAAACAGAGCGTCGTGTACGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTCCCCTGGGCCGGCTCTGTCCCCAGCCCC-----GAGACCTTGGCAAGGCCCCTTGCCCTCTGCCCCTGTGAAGCAGGCCAGGATGAGTCCcctcacggggctgttgtggagggcgtggtg-----acgaggtat-tcagagga-cataga-cagctcctggcacacaggaa------gaggttagcagaGACGAGAGGCCAGTGCTGAGCAGTC--CTCGTGAGCACAGACCG-CTTTAGAACCAGGCCCACGGCTGTGTCCAGGGCATCCAGTTCCTGTCTGTGGGGCCGTGAGCTGGTT--ACACTGCTCAGCCTCCAGGCCTTCCCGTTCAGAATGGCCAGGGCGGTTAAGGTAACCTCAGG-------------AAGTTCCCGGCTAGGTGGGCTTGGATGTCACATGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGTGGCGTGGAGCATGGCAGTCACCGCATT-GTCGGAGCCTCAGTTTACCTACCATCCACAGAGCAGGGCGAGCCTGCA-CGTGGGG--GCGAG-ACAGCAGC-GAGCTCATGTGCtcagtccgcggatgtctgtggagcacctactgacttccatcggtgttcccagctctggggatgaagtgatga--atgagagagacaagtcttaccttcagggagccagt-gggtggccgggcacagacagctcagtaggatgtccaatgtagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45380422 1201 + 49145316 CACATGCATAAGGAA-----GGCCTCTCAACTCTGAGCTCACAGAGCAGCGCCGGGACCCAGCCCCTTTCAGGCTCCCCAGCATCCCCGGCTTGTAGGGGCCCCCAGGCCTCAGCTGGGCCGAGTGGGTACCCGAGCAGGTGCCCATGGGGCCAGCCAGCTGGTGACCGCGGGGCTTCTAGCTGGTGGAGGGGGTGCCTGAGTGG-CTGGAGGGCGGGGTCTGGTCCCTG-ACGGCAGGG-GCTTCCCTTTCCCCCTAGATCGAGGAGGACGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGCGTGCGGCAGACACAGGTCAACGAGGCCACCAAGGCCAGGATCTCCAAGACGCTGCAGGTATGTGCC-GACCTGGGTGGGGCCAGGGACCGA--GGGACGCAAGGTAGGGTGAGCCCAGATA--------ACAGCCT---CCCTGTCCTTCCCACAGCGGACCCTGCAGAAGCAGAGCGTGGTATATGGCGGGAAGTCCACCATCCGCGACCGCTCGTCGGGCACGGCCTCCAGCGTGGCTTTCACCCCACTCCAGGTA----------------------CTTGCCCTGGGCCAGCTCTGTCCCCAGCCCC-----AAGATGCTGGCAAGGCCCCTTGCCCTCTGCCCctgtgaa-caggccacaatgagtccccttacagggctgtcacggggggtgtggtg-----a--agacat-gccaaagg-catcgg-cagcccctggcacacagcaagtgctcgaGGTTAGCAGAGACGAGAGGC----GCACAACAGTC--CTCATGAGCGGGGACCG------------------GGGCTACATCCCAGGGACCCTGTTTTTCTCTGTGGGGCCATGAACGGGTT--ACATTGCTCAGCCTCTAGGACCT-CAGTTTGAAATGGCTAGAGTGGTTAAGGTAACCTCAGGACCCCACTCGAAACAGTTCCCAGCTAGGTGGGCTTGGGTGTCACGTGTGGGTCTGGCCCCCAGCCCAGTCAGCAGTGAGTGGCTTGGAGCACGGCAGTCACCGCACC-ATCGGCACCGCGGTT----TGCCATCCACAGAGCAGGGCGAGCCTGCACCGTGGCT--GTGGG-ACAGTGGG-GAGCTCATCTGCTCAGACAGCGG-------------------------CTGTCGGtgctctcggctctgggggtgaagcggtga--atgagagagacaagtcttgccttcctggagcctgt-gggtggctgggcacagacagatcagtaagatgcccagtgtggt i calJac3.chr22 C 0 C 0 s mm10.chr7 3639388 999 + 145441459 CATACTGCTAAGGATG--ATGGACTCT--------GGCCAATAGGGTAG------------GCTCTTATTAGGTCACTTAAT-----------------GCTGCCAGTCC----CCTGGCTGA---------TGAGGTGGTGTCCATGAGACTGGCTGATTG----------GGTTCTCAGGTGAC--------TGCCTCAGGGGACTGGCTGGATGTACCCAGCTTCTTAACCGCAGGTTGCT--CTCGTCTCACCAGATTGAGGAGGATGCCTATCAGGAAGACCTGGGCTTTAGCCTGGGCCACTTGGGCAAGTCAGGCAGTGGGCGTGTGCGGCAGACCCAGGTGAATGAGGCCACCAAGGCCAGGATCTCCAAGACACTGCAGGTATGGATTGGGCCCA--TGAGAATGGGAGGCAGGTGGGATATGGAGGTCAGTGAGCCTGGATC--------CCAGCCT---CCCCTT--TCCCTACAGCGGACCTTACAGAAACAGAGCGTGGTGTATGGTGGGAAGTCAACAATTCGTGACCGCTCCTCAGGGACTGCCTCCAGTGTGGCCTTCACTCCACTCCAGGTA----------------------CC----------------------------------------------ATACCCTTT----TCTACC---------------------AGGCATATGATAAGGCTGCTGTGGAGATC----TG-----TTGAGATATAGCACATGAGCTTAGG-CATCCACAACCACACAGTAA------GTGCCTAACAG------TTGGCCA-----TGACAGTT--GTGACAAACTCAGACCAACTTTGGAACCAGGACTAGGATGCTGCCCACGTGATCCAGATACTCTCT---------------------GAACTTCCTAGTCTT---------TGTTTAAAAATAGTCCCG-TAGTCAGGATGCCATCAGG---------------------------GTGGGCTTGAGTATCACAG--------------CAG-CCCAGCGGCACTGAGCAGTGTGGAGCAGAATGG------------------CCTCAGGT----TACTTACCACAGAGATAGGCAAGTACGCCCCATAATGTCTCAAG-GAACCAAA-GAGCTCCCTAGCTTG--CCacaagtgcctactgagcacctgc------ccacca-tgttccaggctttgggcatagag--------acaaaagagacaagctttgcttttgtgggg--aga-aggttggggagcacagatgattgagtctagtacacaatgtatt i mm10.chr7 I 241 C 0 s canFam3.chr1 19603210 1094 - 122678785 TACATGAACACTCACAGCTT---CCCTCAACTGTCAGCTCAGGGAGCCGTAATAGGACTGGACTCCTCACTGGGCCCC--------------------------------------------AGCAGGCACCTGAATCGG------------------GTCAGTGCCTG--GGGCATCCGGCTGATGAAAG----------ATGG-CT----------------------AACTCTTGGTTACCTTCCCCTCCCACCAGATCGAGGAAGACGCCTACCAAGAGGACCTGGGCTTCAGCCTGGGCCATCTGGGCAAATCAGGCAGCGGGCGGGTACGGCAGACACAGGTGAACGAGGCCACCAAAGCCAGGATCTCTAAGACACTGCAGGTACAGGCGGGGCCTGAGTGGGCCTGGGAGTCTG--GGAGCTCCAG--CAGGAGAGCCCAAGCCAAGCCCAAACATCCTGTCCCCTCCCCTCCACACAGCGGACCCTGCAGAAGCAGAGTGTCGTGTATGGCGGGAAGTCCACCATCCGTGACCGCTCCTCGGGGACTGCTTCCAGTGTGGCTTTCACCCCTTTGCAGGTACTGTGCACCTgagtcaggaggcccagttctgggcaggctctactcccagctttctgagtggacctgggcaagcccctt-----------------------------------cctctcgcagggcTGTTGTGGACAGCCTTGTGTATCAGTGAAGCCC-CTGAAAGG-TACAGCTCAGTTCCTGGTGCTCAGGCT------AGTGGGAGCAGAAGGGAAAAG-------------GTCTGCCTGCAAGTGCAGGCTGGCTTTAGGATCGGGC------TGGGACTAGGGGTGACTACTGATTCCCCA--TGACCTCAAGTGGGCT----------CAGCTCCT---CCCTGAGGTGCTAAGTGGCTGGGAC---------AACCTCAGGGCTCCACGGAAGAAAACTCAAAGGTAG------CTGGCTGGGAAGCAGAGGTCCCAGCC-CAG-CCACTCA----TGCACAGGACAGAGC--------CTCTGCATCTGTCCATTTCTCAGCC----TAC---CCACAGA-TAGCGCCAGCACGCCCCATAGCA--TCGAGTAGAATAACTGAGTTCATTGGCAACAtcagcaagggtgtactgagcaccta--agtttcaggtgctgttgcaggcactggggatagagccacaagcacaagacag-caagccttgccctcagggagcttgtggggtggcaggggtcaga--------taagatatggagcctggt i canFam3.chr1 C 0 C 0 a score=6561.000000 s hg38.chr19_GL949747v2_alt 104534 9 + 729520 agaaggcag s panTro4.chr19 59038047 9 + 63644993 agaaggcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55916157 9 + 60714840 aaaaggcgc i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45381623 9 + 49145316 aaaaggcag i calJac3.chr22 C 0 C 0 s mm10.chr7 3640387 9 + 145441459 agaagacac i mm10.chr7 C 0 C 0 s canFam3.chr1 19604304 9 - 122678785 ggaaagtgg i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e papAnu2.chr19 47100373 39 + 51301725 T e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=2755.000000 s hg38.chr19_GL949747v2_alt 104543 8 + 729520 -aaatgcca s panTro4.chr19 59038056 8 + 63644993 -aaatgcca i panTro4.chr19 C 0 C 0 s calJac3.chr22 45381632 8 + 49145316 -aaatacca i calJac3.chr22 C 0 C 0 s mm10.chr7 3640396 8 + 145441459 -aggtgcca i mm10.chr7 C 0 C 0 s canFam3.chr1 19604313 8 - 122678785 aaagtgca- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55916166 0 + 60714840 C e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e papAnu2.chr19 47100373 39 + 51301725 T e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=3000.000000 s hg38.chr19_GL949747v2_alt 104551 2 + 729520 GG s panTro4.chr19 59038064 2 + 63644993 GG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100334 2 + 51301725 GG i papAnu2.chr19 T 39 C 0 s calJac3.chr22 45381640 2 + 49145316 gg i calJac3.chr22 C 0 I 489 s mm10.chr7 3640404 2 + 145441459 gg i mm10.chr7 C 0 I 5 s canFam3.chr1 19604321 2 - 122678785 gg i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55916166 0 + 60714840 C e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=5928.000000 s hg38.chr19_GL949747v2_alt 104553 14 + 729520 CCGGGCGCAGACAG s panTro4.chr19 59038066 14 + 63644993 CCGGGCGCAGACAG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100336 14 + 51301725 CCGGGCACAGACAG i papAnu2.chr19 C 0 C 0 s mm10.chr7 3640411 14 + 145441459 gcaggcgtggacgg i mm10.chr7 I 5 I 50 s canFam3.chr1 19604323 8 - 122678785 ------gaagaaag i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=9882.000000 s hg38.chr19_GL949747v2_alt 104567 42 + 729520 CTCAGTAAGATGTCCAGTGTAGGAGAAGGCA-GAAATGCCAGG s panTro4.chr19 59038080 42 + 63644993 CTCAGTAAGATGTCCAGTGTAGGAGAAGGCA-GAAATGCCAGG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100350 42 + 51301725 CTCAGTAGGATGTCCAATGTAGTAGAAGGCG-GAAATgtcagg i papAnu2.chr19 C 0 T 56 s canFam3.chr1 19604331 23 - 122678785 --------------------gggagagggagtgaggcatcggg i canFam3.chr1 C 0 C 0 e mm10.chr7 3640425 50 + 145441459 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=14949.000000 s hg38.chr19_GL949747v2_alt 104609 54 + 729520 ------CTGGGCGCAGACAGCTCAGTAAGATGTCCAG-------TGTAGGAGAAGGCAGAAA---TGCCA s panTro4.chr19 59038122 54 + 63644993 ------CCGGGCACAGACAGCTCAGTAAGATGTCCAG-------TGTAGGAGAAGGCAGAAA---TGCCA i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100336 54 + 51301725 ------CCGGGCACAGACAGCTCAGTAGGATGTCCAA-------TGTAGTAGAAGGCGGAAA---Tgtca i papAnu2.chr19 T 56 T 56 s canFam3.chr1 19604354 70 - 122678785 ttggacccgcccagggaggcctcagcaagaaggtcagaattacctgtggaagatactgggaatggtgcca i canFam3.chr1 C 0 C 0 e mm10.chr7 3640425 50 + 145441459 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=9107.000000 s hg38.chr19_GL949747v2_alt 104663 30 + 729520 GGCCGGGCGCAGACAGCTCAGTAAGATGTC s panTro4.chr19 59038176 30 + 63644993 GGCCGGGCGCAGACAGCTCAGTAAGATGCC i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100334 30 + 51301725 GGCCGGGCACAGACAGCTCAGTAGGATGTC i papAnu2.chr19 T 56 C 0 s canFam3.chr1 19604424 30 - 122678785 gCCAGTGTGGAGCCCCCACAGCTGGACGCC i canFam3.chr1 C 0 I 288 e mm10.chr7 3640425 50 + 145441459 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=6244.000000 s hg38.chr19_GL949747v2_alt 104693 26 + 729520 CAGTGTAGGAGAAGGCAGAAATGCCA s panTro4.chr19 59038206 26 + 63644993 CAGTGTAGTAGAAGGCAGAAATGCCA i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100364 26 + 51301725 CAATGTAGTAGAAGGCGGAAATgtca i papAnu2.chr19 C 0 T 56 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=14450.000000 s hg38.chr19_GL949747v2_alt 104719 56 + 729520 GGCCGGGCGCAGACAGCTCAGTAAGATGTCCAGTGTAGGAGAAGGCAGAAATGCCA s panTro4.chr19 59038232 56 + 63644993 GGCCGGGCGCAGACAGCTCAGTAAGATGTCCAGTGTAGGAGAAGGCAGAAATGCCA i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100334 56 + 51301725 GGCCGGGCACAGACAGCTCAGTAGGATGTCCAATGTAGTAGAAGGCGGAAATgtca i papAnu2.chr19 T 56 T 56 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=15050.000000 s hg38.chr19_GL949747v2_alt 104775 58 + 729520 GGCCGGGCGCAGACAGCTCAGTAAGATGTCCAGTGTAGGAGAAGGCAGAAATGCCAGG s panTro4.chr19 59038288 58 + 63644993 GGCCGGGCGCAGACAGCTCAGTAAGATGTCCAGTGTAGGAGAAGGCAGAAATGCCAGG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100334 58 + 51301725 GGCCGGGCACAGACAGCTCAGTAGGATGTCCAATGTAGTAGAAGGCGGAAATgtcagg i papAnu2.chr19 T 56 T 56 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=13935.000000 s hg38.chr19_GL949747v2_alt 104833 56 + 729520 CTGGGCGCAGACAGCTCAGTAAGATGCCCAGTGTAGTAGAAGGCAGAAATGCCAgg s panTro4.chr19 59038346 56 + 63644993 CCGGGCGCAGACAGCTCAGTAAGATGTCCAGTGTAGGAGAAGGCAGAAATGCCAgg i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100336 56 + 51301725 CCGGGCACAGACAGCTCAGTAGGATGTCCAATGTAGTAGAAGGCGGAAATgtcagg i papAnu2.chr19 T 56 T 19 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=26492.000000 s hg38.chr19_GL949747v2_alt 104889 292 + 729520 ccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggtggatcatgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaacttagccgggcgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcacttcagcctgggcgacagagccagactctgtctcaaaaaaaaaaaaa s panTro4.chr19 59038402 292 + 63644993 ccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcatgaggtcaggagatcgagaccatcctggctaacatggtgaaaccctgtctctactaaaaatacaaaaacttagccgggcgtggtggcgggtgcctgtagtcccagctacttgggaggctgtggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagccaagatcgtgccactgcactccagcctgggcgacagggccagactccatctcaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e papAnu2.chr19 47100392 19 + 51301725 T e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=17014.000000 s hg38.chr19_GL949747v2_alt 105181 9 + 729520 agaaggcag s panTro4.chr19 59038694 9 + 63644993 agaaggcag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102680791 9 - 106955855 agaaggcgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59966558 9 + 64156825 agaaggcgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54984456 9 + 59248254 agaaggcgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47100373 9 + 51301725 AGAAGGCGG i papAnu2.chr19 T 19 C 0 s chlSab2.chr6 46807850 9 + 50890351 agaaggcgg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I a score=516860.000000 s hg38.chr19_GL949747v2_alt 105190 211 + 729520 aaaTGCCagggaggggaggaggtggaaggtaggaggtgggaCAGGGGAGGCTCTCGTTTCGGAGCAGCCAGGGAGGGCCTCTTTGAGAAGATGAGGCCAGTGGCTGTGCCTTTCCAAGCCTCCCCTCCTCCATCATGAGGTGCTCaggactgaaaagaacgcacaggaagcacttggcactgggctcaccattagagcccaatgactgggt s panTro4.chr19 59038703 211 + 63644993 aaaTGCCAGGGAGGGGAGGAGGTGGAAGGTAGGAGGTGGGACAGGGGAGGCTCTTGTTTTGGAGCAGCCAGGGAGGGCCTCTTTGAAAAGATGAGGCCAGTGGCTGTGCCTTTCCAAGCCTCCCCTCCTCCATCATGAGGTGCTCAGGACTGAAAAGAACGCACAGGAAGCACTTGGCACTGGGCTCACCATTAGAGCCCAATGACTGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55916166 211 + 60714840 aaatgccagggaggggaggaggtggaaggtagggggtgggacaggggagactctcgttttggagcagccagggagggcctctttgagaagatgaGGCCAGTGGCTATGCCTTTCCAAGCCTCCCCTCCTCCATCATGAGGTGCTCAGGACTGAAAAGAATGCACAGGAAGCACTTGGCACTGGGCTTACCATTAGAGCCCGATGACTGGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102680800 210 - 106955855 aaatgccagggagggga-gaggtggaaggtaggaggtgggacaggggaggctctcgttttggagcagccagggagggcctctttgagaagatgaGGCCGGTGGCTGTGCCTTTCCAAGCCTCCCCTCCTCCACCATGAGGTGCTCAGGACTGAAAAGAATGCGCAGGAAGCACTTCGCACTGGGCTCACCATCAGAGCCCGATGACTGGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59966567 209 + 64156825 aaatgccagggaggggaggaggtgggaggtaggaggtgggac--gggggactctcgttttggagcagccagggagggcctctttgagaagatgaGGCCAGTGGCCGTGCCTTTCCAAGCCCCCCCTCCTCCGCCATGAGGTGCTCGGGACTGAAAAGAATGCACAGGAAGCACTTGGCACTAGGCTCACCACTGGAGCCCGATGACTGGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54984465 209 + 59248254 aaatgccagggaggggaggaggtgggaggtaggaggtgggac--gggggactctcattttggagcagccagggagggcctctttgagaagatgaGGCCAGTGGCCGTGCCTTTCCAAGCCTCCCCTCCTCCGCCATGAGGTGCTCAGGACTGAAAAGAATGCACAGGAAGCACTTGGCACTGGGCTCACCACTGGAGCCCAATGACTGGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47100382 209 + 51301725 AAATgtcagggaggggaggaggtgggaggtaggaggtgggac--ggggagCTCTCGTTTTGGAGCAGCCAGGGAGGGCCTCTTTGAGAAGATGAGGCCAGTGGCTGTGCCTTTCCAAGCCTCCCCTCCTCTGCCATGAGGTGCTCAGGACTGAAAAGAATGCACAGGAAGCACTTGGCACTGGGCTCACCACTGGAGCCCGATGACTGGgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46807859 209 + 50890351 aaatgccagggaggggaggaggtgggaggcaggaggtgggac--ggggggctctcgttctggagcagccagggagggcctctttgagaagatgaGGCCAGTGGCTGTGCCCTTCCAAGCCTCCCCTCCTCCGCCATGAGGTGCTCAGGACTGAAAAGAATGCACAGGAAGCACTTGGCACTGGGCTCACCACTGGAGCCCGATGACTGGGT i chlSab2.chr6 C 0 C 0 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e calJac3.chr22 45381642 489 + 49145316 I a score=241281.000000 s hg38.chr19_GL949747v2_alt 105401 85 + 729520 cctgttatt--------ATTTTTAGAGACGGGGGCTCGCTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCTCCCATTGC s panTro4.chr19 59038914 85 + 63644993 CCTGTTACT--------ATTTTTAGAGACGGGGGCTCGCTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCTCCCATTGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55916377 85 + 60714840 CCTGTTATT--------ATTTTTAGAGACAGGGGCTCGCTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCGGCCAGGTGTTGGCTCCCATTGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102681010 83 - 106955855 CCTGTTAGT--------ATTTTTAGAGAC--GGGCTCACTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCTCCCATCGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59966776 87 + 64156825 CCTGTTATT------TTTTTTTTAGAGACAGGGGCTCGCTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCGCCCATCGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54984674 87 + 59248254 CCTGTTATT------TTTTTTTTAGAGACAGGGGCTCGCTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCGCCCATCGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47100591 93 + 51301725 cctgttatttatttattttttttagagacaggggcttgctctgtt------gccttgAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCTCCCATCGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46808068 89 + 50890351 CCTGTTATT----TTTTTTTTTTAGAGACAGGGGCTTGCTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCTCCCATCGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45382131 94 + 49145316 ccTGttatt-----attttctttagagacagagtctcgctctgttgcccaggcCTTGAAAATATTTAGGAAGTTCCAGCCAGGTGCCGGCGTCTATCGC i calJac3.chr22 I 489 C 0 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I a score=302873.000000 s hg38.chr19_GL949747v2_alt 105486 92 + 729520 TG-CCACTATGATCGTCAGTGGTGTTGGTGTGATTTGtgctaggacctcgggccagccatgtcccccagggactcagtttccttatgcagaaa s panTro4.chr19 59038999 92 + 63644993 TG-CCACTATGATCGTCAGTGGTGTTGGTGTGATTTGTGCTAGgacctcgggccagccatgtcccccagggactcagtttccttatgcagaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55916462 91 + 60714840 TG--CACTATGATCGTCAGTGGTGTTGGTGTGATTTGTGCTAGgacctcgggccagccatgtcccccagggactcagtttcctcatgcagaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102681093 93 - 106955855 TGGCCACTGTGATCGTCAGTGGTGTTGGTGTGATCTGCGCTGGGACCTCCGGCCAGCCATGTCCCCCAGGGACTCAGTTTCTGCATGCAGAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59966863 93 + 64156825 TGGCCACTGTGATCGTCGGTGGTGTTGGTGTGATTTGTGCtgggacctcgggccagccacgtcccccagggactcagtttcctcatgcagaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54984761 93 + 59248254 TGGCCACTGTGATCGTCGGTGGTGTTGGTGTGATTTGtgctgggacctcgggccagccacatcccccagggactcagtttcctcatgcagaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47100684 93 + 51301725 TGGCCACTGTGATCGTCGGTGGTGTTGGTGTGATTTGTGCTGGGACCTCGGGCCAGCCACGTCCCCcagggactcagtttcctcatgcaGAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46808157 93 + 50890351 TGGCCACTGTGATTGTCGGTGGTGGTGGTGTGATTTGTGCtgggacctcgggccagccacgtcccccagggactcagtttcctcatgcagaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45382225 93 + 49145316 TGGACACTGTGATCATCAGTAGTGTTGGTGTGATTTGTGCtgggacctccagccagccacatcccccagagactcagtttcctcatccagaaa i calJac3.chr22 C 0 C 0 s mm10.chr7 3640475 87 + 145441459 tg-ccagcattgtcatcactgtcatgggtgggattt--gcaggaaaCT--GGCTGGCCATATCCCTCTGGGATTCAGTTTCCTTATCCAG-AA i mm10.chr7 I 50 C 0 e canFam3.chr1 19604454 288 - 122678785 I a score=3417376.000000 s hg38.chr19_GL949747v2_alt 105578 1025 + 729520 ctgggcaggattggctgtcctcaagcattggttgtttttagca-cccctgaggaacttcgtacaaatccaggcgccctggttcctccccaccct---ctccctctagacccactgagtcagaatctcCCAAGAC--------AGGGCAACTCCAGGGACAGGCAAACTGTCTCATGCCCA-CCAAGGCCTGAGTGCCATGGGGAAGGGCCTGGGGGGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCTAACCCATCATCC-----------TCTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCACAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTTATGTCCACCTGAATGACTGCGTGTGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGTCC-AGTCCTTCTGAAG-GGCT-AGGATCG--------GGTTCTGGCAGGGAGAA----------CCTGCCCTGCCACTGGCCCCATTGCTGGGACTGCCCAGGGAGGAGGCCTTGGAAG-AGTCCGGCCTGGCCTCCCCCAGGACCGAGATCACCG---CCCAGTAT---GGGCTAGAGCAGGTCTTCATCATGCCTTGTCTT-----TTTTAACTGAGAAAGGAGA---TTTTTTGAAAAGAGTACAATTAAAAGG-ACATTGTCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCCGGGGCAACTAGAAGAATCAGAGCTGTGGAGCTTT--GAGAAAAGAGCTTGGCCCTCGGGTCCAAGCGGTGTCTAGGCCCACTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAAGCCC------TCTCC--------AACCCCCTGGAGAGCCGCAGTCACTTTGATAGCA--AA-------------TGATGTGGCTGCCA-ACAGCCGCAGATCTCAGCGCAGGCCGACCGGGATTGCTGT-CCACCTCAGGCCAGCCTCCTCACCTTTCCAAGCCTCCACACCTA------CGCCCAGGTG----CCCAGGAC--TGgaaagaatgcacagaaagcactta s panTro4.chr19 59039091 1028 + 63644993 cggggcaggattggctgtcctcaagcattgg-tgtttttagcaccccctgaggaacttcatacaaatctaggcgccctggttcctccccaccct---ctccctccagacccactgagtcagaatctcccaagac--------agggcAACTCCAGGGACAGGCAAACTGTCTCATGCCCA-CCAAGGCCTGAGTGCCATGGGGAAGGGCCTGGGGGGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCTAACCCATCATCC-----------TCTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCACAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTTATGTCTACCTGAATGACTGCGTGTGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGTCC-AGTCCTTCTGAAG-GGCT-GGGATCG--------GGTTCTGGCAGGGAGAA----------CCTGCCCTGCCACTGGCCCCATTGCTGGGACTGCCCAGGGAGGAGGCCTTGGAAG-AGTCCGGCCTGGCCTCCCCCAGGACCGAGATCACCG---CCCAGTAT---GGGCTAGAGCAGGTCTTCATCATGCCTTGTCTT-----TTTTAACTGAGAAAGGAGATACTTTTTTGAAAAGAGTACAATTAAAAGG-ACATTGTCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCCGGGGCAACTAGAAGAATCAGAGCTGTGGAGCTTT--GAGAAAAGAGCTTGGCCCTCGGGTCCAAGCGGTGTCTAGGCCCACTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAAGCCC------TCTCC--------AACCCCCTGGAGAACCGCAGTCACTTTGATAGCA--AA-------------TGATGTGGCTGCCA-ACAGCCACAGATCTCAGCGCAGGCCGACCGGGATTGCTGT-CCACCTCAGGCCAGCCTCCTCACCTTTCCAAGCCTCCCTACCTA------CGCCCAGGTG----CCCAGGAC--TGgaaagaatgcgcagaaagcactta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55916553 1035 + 60714840 cggcgcaggattggctgtcctcaagcattggtggtttttagcaccccctgaggaacttcatacaaatctaggcgccctggttcctccccaccct---ctccctccagacccactgagtcagaatctcccaagac--------agggcAACTCCAGGGACAGGCAAACTGTCTCATGCCCACCCAAGGCCTGAGTGCCATGGGGAAGGGCCTGGGGCGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCTAACCCATCATCC-----------TCTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCACAGGCAGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCCACCTGAATGACTGCGTGTGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGTCT-AGTCCTTCTGAAG-GGCT-GGGATTG--------GGTTCTGGCAGGGAGAA----------CCTACCCTGCCACCGGCCCCAGTGCTGAGACTGCCTAGGGAGGAGGCCTTGGAAG-AGCCCGGCCTGGCCTCCCCCAGGACCGAGATCACCG---CCCGGTAT---GGGCTAGAGCAGGTCTTCATCATGCCTTGTCTTTTTTATTTTAACTGAGAAAGGAGAAACTTTTTTGAAAAGAGTACAATTAAAAGG-ACATTATCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAAGAGTCAGAGCTGTGGAGTTTT--GAGAAAAGAGCTTGGCCCTCGGGTCCAAGTGGTGTCTAGGCCCACTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAAGCCC------TCTCC--------AACCCCCTGGAGAACCTCAGTCACTTTGATAGCA--AA-------------TGATGTGGCTGCCG-ACAGCCACAGATCTCAGCGCAGGCCGACCGGGATTGCTGT-CCACCTCAGGCCAGCCTCCTCACCTTTCCAAGCCTCCACACCTA------CGCCCAGGTG----CCCAGGAC--TGgaaagaatgtgcagaaagcactta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102681186 1027 - 106955855 CTGGGCAGGATTGGCTgtcctcaagcattggttgtttttagcaccccctgaagaacttcatacaaatctaggcaccctggttcctccctacc-----ttccctccagacccatggagtcagaatctcCCAAGAC--------AGGGCAACTCCAGGGACAGGCAAACTGTCTCATGCCCACCCACGGCCTGAGTACCATGGGGAAGGGCCTGGGGGGCTTTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCTAACCCATCATC-------------CTCTCCCTCACCTGCCCAGGGCTTGGAGATTGTGAACCCACAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCCACCTGAATGACTGCATGCGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGTCT-AGTCCTTCTGAAG-GGCT-GGGATCG--------GGTTCTGGCAGTGAGAA----------CCTGCCCTGCCACCGGCCCCAGTGCTGGGACTGCCCAGGGAGGAGGCCTTGGAAG-AGATGGGCCCAGCCTCCCCCAGGACCGAGATCACTG---CCCAGTAT---GGGCTAGAGCAGGTCTTCATCATGCCTTGTCTTTTTTATTTTAACTGAGAAAGGAGATACTTTTTTG--AAGAGTACAATTAAAAGG-ACATTATCAAGGTCTGTCCTTGGAGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAAGAGTCAGAGCTATGGAGTTTT--GAGAAAAGAGCTTGGCCCTCGGGTCCAAGCGGTGTCTAGGCCCACTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAGACCC------TCTCC--------AACCCCCTGGAGAACCTCAGTCACTTTGATAGCA--AA-------------TTATGTGGCTGCCG-ACGGCCGCAGA--TCAGCGCAGGCCGACCGGGATTGCTGT-CCACCTCAGGCCAGCCTCCTCACCTTTCCAAGCCTCCACACCTA------CGCCCACGTG----CCCAGGAC--TGCAAAGAACGCACAGAAAGCACTTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59966956 1040 + 64156825 ctgggcaggattggctgttctcaagcgtcggttgtttttagca-cccctgaggaacttcatacaaatctaggcgccctggttcctccccagcct---cttccccgagacccactgagtcagaacctcCCAAGAC--------AGGGCAACTCCAGGGACAGGCAAACTGTCTCATGCCCACCCAAGGCCTGAGTACCATGGGGAAGGGCCTGGGGGGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCCAACCCACCATCC-----------TGTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCACAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCCACCTGAATGACTGCGTGTGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGCCC-AGTCCTTCTGAAG-GGCT-GGGATTGGGGCTGGCGGTTCTGGCAGGGAGAA----------CCTGCCCTGCCACCGGCCCCAGTGCTGGG-CTCCCCAGGGAGGAGGCCTTGGAAG-AGCCCGGCCTGGCCTCCCCCAGGACCGAGGTCACTG---CCTGGTGT---GGGCTAGAGCCGGTCTTCATCATGCCTTGTCTGTTTTATTTTAACTGAGAAAGGAGATGCTTTTTTGAAAAGAGTACAATTAAAAGG-ACATTATCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAAGAGTCAGAGCTATGGAGTTTT--GAGAAAAGAGCTT-TCCCTCGGCTCCAGGAGGTGTCTAGGCGCGCTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAA-CCC------TCTCC--------AGTGTCCTGGACAACCTCAGTCACTTCGATAGCA--AA-------------CGATGTGGCTGCCG-ACAGCCGCAGAGCTCAGCGCAGGCCAGCCGGGATTGCTCTGGCACCTCAGGCCAGCCACCTCGCCTTTCCAAGCCTCCGCACCTA------CGCCCAGGGG----CCCAGGAC--TGGAAAAAATGCACAGAAAGCACTTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54984854 1040 + 59248254 ctgggcaggattggctgttctcaagcgtcggttgtttttagca-cccctgaggaacttcatacaaatctaggtgccctggttcctccccagcct---cttccccgagacccactgagtcagaacctcccaagac--------agggcAACTCCAGGGACAGGCAAACTGTCTCATGCCCACCCAAGGCCTGAGTACCATGGGGAAGGGCCTGGGGGGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCCAACCCACCATCC-----------TGTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCACAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCCGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCCACCTGAATGACTGCGTGTGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGCCC-AGTCCTTCTGAAG-GGCT-GGGATTGGGGCTGGCGGTTCTGGCAGGGAGAA----------CCTGCCCTGCCACCGGCCCCAGTGCTGGG-CTCCCCAGGGAGGAGGCCTTGGAAG-AGCCCGGCCTGGCCTCCCCCAGGACCGAGGTCACTG---CCTGGTGT---GGGCTAGAGCCGGTCTTCATCATGCCTTGTCTGTTTTATTTTAACTGAGAAAGGAGATGCTTTTTTGAAAAGAGTACAATTAAAAGG-ACATTATCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAAGAGTCAGAGCTATGGAGTTTT--GAGAAAAGAGCTT-TCCCTCGGCTCCAGGCGGTGTCTAGGCGCGCTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAA-CCC------TCTCC--------AGTGTCGTGGACAACCTCAGTCACTTCGATAGCA--AA-------------CGATGTGGCTGCCG-ACAGCCGCAGAGCTCAGCGCAGGCCAGCCGGGATTGCTCTGGCACCTCAGGCCAGCCACCTCGCCTTTCCAAGCCTCCACACCTA------CGCCCAGGGG----CCCAGGAC--TGGAAAAAATGCACAGAAAGCACTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47100777 1037 + 51301725 CTGGGCAGGATTGGCTGTTCTCAAGCGTCGGTTGTTTTTAGCA-CCCCCGAGGAACTTCGTACAAATCTAGGCGCCCTGGTTCCTCCCCAGCCT---CTCCCCCGAGACCCACTGAGTCAGAACCTCCCAAGAC--------AGGGCAACTCCAGGGACAGGCAAACTGTCTCATGCCCACCCAAGGCCTGAGTACCACGGGGAAGGGCCTGGGGGGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCCAACCCACCATCC-----------TGTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCGCAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCTAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCCACCTGAATGACTGCGTGTGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGCCC-AGTCCTTCTGAAG-GGCT-GGGATGGGGGCTGGGGGTTCTGACAGGGAGAG----------CCTGCCCTGCCACCGGCCCCAGTGCTGGG-CTCCCCAGGGAGGAGGCCTTGGAAG-AGCCCGGCCTGGCCTCCCCCAGGACCGAGGTCACTG---CCTGGTGT---GGGCTAGAGCCGGTCTTCATCATgccttgtctgttttattttaactgaGAAAGGAGATGCTTTTTTGAAAAGAGTACAATTAAAAGG-ACATTATCAAGATGTGTTCTTGGGGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAAGAGTCAGAGCTATGGAGTTTT--GAGAAAAGAGCTT-TCCCTCGGGTCCAAGTGGTGTCTAGGCGTGCTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAA-CCC------TCTCC--------AGTGCCCTGGACAACCT--GTCACTTCGATAG-A--AA-------------TGATGTGGCTGCCG-ACAGCCGCAGAGCTCAGCGCAGGCCAAGCGGGATTGCTCTGGCACCTCAGGCCAGCCACCTCGCCTTTCCAAGCCTCCACACCTA------CGCCTAGGAG----CCCAGGAC--TGGAAAAAATGCACAGAAAGCACTTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46808250 1041 + 50890351 ctgggcaggattggctgttctcaagcgtcGGTTGTTTTTAGCA-CCCCTGAGCAACTTCGTACAAATCTAGGTGCCCTGGTTCCTCCCCAGCCT---CTCCCCCGAGACCCACTGAGTCAGAACCTCCCAAGAC--------AGGGCAACTCCAGGGACAGGCAAACTGTCTCACGCCCACCCAAGGCCTGAGTACCATGGGGAAGGGCCTGGGGGGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCCAGCCCACCATCC-----------TGTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCACAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCCACCTGAATGACTGCGTGTGTCCGAGGTGGCTTCCCACTGAAGGGACACAGAGGCCCAAGTCCTTCTGAAG-GACT-GGGATCGGGGCTGGGGGTTCTGGCAGGGAGAA----------CCTGTCCTACCACTGGCCCCAGTGCTGGG-CTCCCCAGGGAGGAGGCCTTGGAAG-AGCCCAGCCTGGCCTCCCCCAGGACCGAGGTCACTG---CCTGGTGT---GGGCTAGAGCCGGTCTTCATCATGCCTTGTCTGTTTTATTTTAACTGAGAAAGGAGATGCTTTTTTGAAAAGAGTACAATTAAAAGG-ACATTATCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAAGAGTCAGAGCTATGGAGTTTT--GAGAAAAGAGCTT-TCCCTCGGGTCCAAGCGGTGTCTAGGCGCACTCCCTTCCCCGTTACTTTCTCGTCGTGGGATCCCAGAAGGAAAAA-GCC------TCTCC--------AGTGCCCTGGACAACCTCAGTCACTTTGATAGCA--AA-------------TGATGTGGCTGCCG-ACAGCCGCAGAGCTCAGTGCAGGCCAGCCGGGATTGCTGCGGCACCTCAGGCCAGCCACCTCGCCTTTGCAAGTCTCCACACCTA------CGCCTAGGTG----CCCAGGAC--TGGAAAAAATGCACAGAAAGCACTTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45382318 991 + 49145316 ctgagcaggattggCTGTCCTCAGGCACTGG-TGTTTttagcagcccctggggaacttgttaaaaacctaggtgccctggtttctccccaccct---ctccccccagacccactgaggcagaatcttccaaggc--------agggcGACTCCAGGGACTGGCAAACTGTCCCATGCCCACCCAAGGCCTGAGTACCACGGGGAAAGGCCTGGGGGGCTCTGGCGTGT--CAGTT---------------GGGGCCT---TCTCCTTGCCCAACACATCATCC-----------TCTCTCCCTCACCTGCCTAGGGCCTGGAGATTGTGAACCCACAGGCCGCGGAGAAGAAGGTGGCTGAGGCCAATCAGAAGTATTTCTCCAGCATGGCAGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCTACCTGAATGATAGCGTGTGCCCAACGTGGCTTCCCACTGAAGGGACGTTGAAGTCC-AGGCCTTCTGAAG-GGCT-GGGATGGGGGTTAGGGGTTGTGGCAGGGAGAG----------CCTTCCCTGCCGCCCA-CCCGGTGCTCGA-CTGCCCAGGGAGG-GGCCTCGGAAGAAGCCTGGCCCGGCCTCCTCCAGGACGGAGCTCACCG---CCCTGGAT---GGGTTAGAGCAGGTCT---TCATGCCTTGTCTTTTTTATTTTAACTGAGAAAGGAGATACTTTTTTGAAGAGAGTGCAATTAAAAAGCACATTATCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAATAGTCAGAGCTTCGGAGTTTG--GGGAAAAGAGCTTCGCCTCCGG----------------GGCTCACTCCCTCCCCTGTTCCTTTCTCA------------------------------------CC--------AACCCCCTGGAGAACCTCAGTCGCTTTGATAGCA--GA-------------CGGTGTGGCAGCCG-ACACCTGAAGATCTCAGCGCAGGCTGACCAAGGTTGCGCTGGCACCTCAGGCCGGTTGCCTCGCCTTTCCGAGCCTCCACAGCTA------CGCCCAGGCG----CCCAGGGC--TGgaaagaacgcgcagaaagcactta i calJac3.chr22 C 0 C 0 s mm10.chr7 3640562 964 + 145441459 CCAGGCAGGAGTGG------------------TGATTTTAACATCACCTGAGGAGATTAACA-----------GTCCTGACATCT----AAGAC---CTACCCCAACACCCACTGTGTCAAAAATCTCCCAAAC------TGAGGGAGACTTCAGGGACT-GTAAATGGTTCCATGTCCA--CAAG------------------AGTGTCTGGGAGACTCTGACATGTC-TGGTTCTCAT-CTAG--AGGGAGGCCTGAGCTTCCCAACTTCACCTGTCACC-------------CTCTTCCTTTCCAACCCAGGGTCTAGAGATTGTGAACCCACAAGCAGCCGAGAAGAAGGTGGCAGAGGCCAACCAGAAGTATTTCTCTAGCATGGCCGAGTTCCTCAAGGTCAAGGGTGAGAAAAGTGGCACCATGTCTACCTGAAGGA--GCCCGCACTCCAGGTGACCATCCACTGAAAGGACATAAAGGACT-GGAGCTTCTGAAGTGACA-GATATCCAGCCAGGAAGTTGTGGTGTGGTGGAGGCAGCCTTCCATGCTTTGCCTTTGGCCCAAGGCCATAG-CATCCAAGAAAAAGGAT----GAAG-AACCTTAGCCTGCCTCCCCCAGCATCCATGCTGCTGCTTCCCTAAAC---GGGCAGAA--AGGTCTTCCTCACA-CTCAGCTTTTTTACTTACAGGGGGAAAGGCAGTGCTTTTATAGAACGAGTACAATTAAATGT-GTAGTGTCGGGCTCTGAACAGAGGGTGTGAGTGATTATGAAA---------GAACCAAAGGACTCAGAGCTGTGGGGCTTCCAGTGTGAGCAGCAT-------GGACCCA----------------GCTCTCTTCTGC-------TCTTATCCTGGAATCT----AAGAAAAA-CCCTGTCTATCTCT--------AACACCATCACCTGCCCCA-------TGAGAACATCAG-------------CATCATGGCCACCACAAAACTCCAGGACCCAACAAGACCCA--CAGGGTTGTTGT---CCCTCAGGCTAGACACCTTGGTCCAAGAAACATCCACACAAAATGAAGCACGTAAAAG----CC-----T--TGGAAAGTGTGTACAGAAAGCACCCA i mm10.chr7 C 0 I 2427 s canFam3.chr1 19604742 1028 - 122678785 ctgagccacctgggctgccc---AACATTGA-TGCTTttaaaattgcttagagaacttgataaaaattcagatgcccaggt-cctccccaCTCTTCCCTCTTCCCAGAGCCAC--AGTTAGAATCTCCCCAGGTTTGGGGTGGGGGCAA-TTTGGTAATTGGAAAACTGTTCTAT---CACCTGGAGCCCG-GAACCATTGAAAAGGGCCT------CCCCGACATGTCACAATTCTCTTACTGGGTAAGGGGGCCT---TGTCAGGGGCCAGCCCATCTCCCCACCCCATCATTACCTCATTCACCTGCCCAGGGCCTAGAGATTGTGAACCCACAAGCAGCTGAGAAGAAGGTGGCTGAAGCCAACCAGAAGTATTTCTCCAGCATGGCCGAGTTCCTCAAGGTCAAGGGCGAGAAAAGCGGCATCATGTCCACCTGAGGGGC----TGTACCCTGGGTGGCTGCCC-CTGAAGCTACAC--AGGCCC-TGCCCTTCTGAAG-GGATCAGGATCA--------GGATAGGGCTGGGAGGT----------TCTGTCCT-----CAG-CCCAGTGCCAGGACTGTCCAGGAA---GACTCAGGAGG-AGACC-------CAGTCCCCACGCACGAGATCGCTC---CCTATTGCAGGGGGGCAGAGCCAGTCTTCATCATGCCTCACCTT-----TTTTAACTAGGAAGGAAGATACTTT--TGGAAAAAGTACGATTAAAAAGCACATTATCAAGTTCCGTTCCTGGGGAGTGATCATTTGTCAAACACATGCG-TGACTGGAGGAGTCAGAGCTGTGCGGGTTTGGGGGCACAGAGCTT-------------------------GGGCCCTTCCCTGGCCTTTCACTTCCCTGTGATGGACCCCAGGAAGAGAAAAGCCT------TCTCTATGTCCAAACCTCCTTGGAGAACGTAAGT---TCTGACACTC--AAGTTCTGACACTTCTGATGTGGCTACTG-AAAGCCCTGGCTTTGAAAACTTGCCAACCTGGGTGGCTGT--GATGTCAGGGGAGTGGCCATGCCTTTCCAGGCCTCCACCCTGA------ACACTACGGGGTCACCCATGACCATGTGAGACATGCTCGGGAGGTGCTTA i canFam3.chr1 I 288 C 0 a score=58637.000000 s hg38.chr19_GL949747v2_alt 106603 28 + 729520 gcatgggacttgccatcagcgccctata s panTro4.chr19 59040119 28 + 63644993 gcatgggacttgccatcagcgccctata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917588 28 + 60714840 gcatgggacttgccatcagcgctttata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102682213 28 - 106955855 GCATGGGACTcgccatcagcgcccaata i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59967996 22 + 64156825 GCATG------GCCATCAGCGCCCAATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54985894 22 + 59248254 GCATG------GCCATCAGCGCCCAATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47101814 22 + 51301725 GCATG------GCCATCAGCGCCCAATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46809291 22 + 50890351 GCATG------GCCATCAGCGCCCAATA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45383309 27 + 49145316 gcacagggctcg-cgtcagcacccaata i calJac3.chr22 C 0 C 0 s canFam3.chr1 19605770 28 - 122678785 GTGTTGGGCTCCCCGACAGGGTCCAGTA i canFam3.chr1 C 0 I 94 e mm10.chr7 3641526 2427 + 145441459 I a score=444647.000000 s hg38.chr19_GL949747v2_alt 106631 184 + 729520 accaggtcctgttatGATTGGG--ttttttagagacggggtctctgttgcccaggttggagtacagtgatgcgatga-agctcactaaagcctcaaactcctgg------gctgggattacaggcatgaaccagcacagctggcctcctggttaatttaaa----------tttttt-ttttttttctgaggtggagtctcgct s panTro4.chr19 59040147 185 + 63644993 accaggtcctgttatGATTGGG--ttttttagagacggggtctctgttgcccaggttggagtacagtgatgcgatga-agctcactacagcctcaaactcctgg------gctgggattacaggcgtgaaccagcacagctggcctcctggttaatttaca---t------tttttt-ttttttttctgaggtggagtctcgct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917616 190 + 60714840 accaggtcctgttattACTGGGttttttttagagacagggtctctgttgcccaggttggagtacagtgatgcgatca-agctcactacagcctcaaactcctgg------gctgggattacaggcatgaaccactgcaactggcctcctggttaatttaaatttt------tttttt-ttttttttctgaggtggagtctcact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102682241 186 - 106955855 accaggtcttgttagtgttgggttttttttagagacggggtctctgttgcccaggttggagtacagtgatgcgatcatagctcgctacagcctcaaactcctgg------gctaggattacaggcatgaaccggcacacctggcctcctggttaatttaa-----------tttttt-tttttttcctgaggtggagtctggct i nomLeu3.chr10 C 0 I 3 s rheMac3.chr19 59968018 193 + 64156825 ACCAGGTCCTGTTGTTACTGGt-tttttccagagacggggtctctgttgcccaggttggagtacggtgatgcagtcatagctcactacagcctcaaa---ctgg------gctGGGATTACAGGCACGAAGCTCCACAGCTGGCCTCCTGGTTAATGTAACAttttttgtgtgtttg-gtttttttctgaggtggagtctcgct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54985916 193 + 59248254 ACCAGGTCCTGTTGTTACTGGt-tttttccagagacggggtctctgttgcccaggttggagtacggtgatgcagtcatagctcactacagcctcaaa---ctgg------gctgggattacaggcatgaagcaccacagctggccTCCTGGTTAATTTAACAttttttgtgtgtttg-gtttttttctgaggtggagtctcgct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47101836 196 + 51301725 ACCAGGTCCTGTTGTTACTGGT-TTTTTCCAGAGAcggggtctctgttgcccaggttggagtacggtgatgcagtcatagctcactacagcctcaaactcctgg------gctgggattataggcatgaaccaccgcagcTGGCCTCCTGGTGAATTtaacattttgtgtgtgtttg-ttttttttctgaggtggagtctcgct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46809313 197 + 50890351 ACCAGGTCCTGttgttactgtt-tttttccagagacggggtctccgttgcccaggttggagtacggtgatgcaatcatagctcactacagcctcaaactcctgg------gctgggattacaggcatgaaccaccgcacctggcctcctggttaatttaacattttttgtgtgtttgtttttttttctgaggtggagtctcgct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45383336 174 + 49145316 actgggtcctgtt---actGGT-Gttttttagagatgaggcctctgtcgcccaggctggagtacagtgatgtaatcatagctcactacggcctcaaactcctggtttcaagctgggattacagacgcatgccacag--------ttcctggttaat-----------------tttg-aaactttttatagatggggtcgcact i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I a score=2800.000000 s hg38.chr19_GL949747v2_alt 106815 1 + 729520 c s panTro4.chr19 59040332 1 + 63644993 c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917806 1 + 60714840 c i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59968211 1 + 64156825 c i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54986109 1 + 59248254 c i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47102032 1 + 51301725 c i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46809510 1 + 50890351 c i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45383510 1 + 49145316 c i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e nomLeu3.chr10 102682427 3 - 106955855 I a score=306169.000000 s hg38.chr19_GL949747v2_alt 106816 169 + 729520 tgttgcccaggctagagtacagtggtgcaatcttggctcactgcaacctctacctcccgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccatgtcccgctaatttttatagtttttagtagagacagggtttcgccatg s panTro4.chr19 59040333 169 + 63644993 tgtcgcccaggctagagtacagtggtgcaatcttggctcactgcaacctctacctcccgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcatgcgccaccacatcccactaatttttatagtttttagtagagacagggtttcgccatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917807 169 + 60714840 tgtcacccagactagagtacagtggtgcaatcttggctcactgcaacctctacctcctgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcatgcgccaccacgccccactaatttttatagtttttagtagagacagggtttcgccatg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59968212 169 + 64156825 tgtcgcccaggctagagtgcagtggtacaatcttggctcactgcaacctccacctcccaggttcaagcgattctcttgcctcagtctcccaagttgctgggattacaggcatgcgccaccacacctggctaatttttatagtttttagtagaaacggggtttcaccatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54986110 169 + 59248254 tgtcgcccaggctagagtgcagtggtacaatcttggctcactgcaacctccacctcccaggttcaagcgattctcttgcctcagtctcccaagttgctgggattacaggcatgcgccaccacacctggctaatttttatagtttttagtagaaacggggtttcaccatg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47102033 169 + 51301725 tgtcgcccaggctagagtgcagtggtacaatcttggctcactgcaacctccacctcccaggttcaagcaattctcttgcctcagtctcccaagttgctgggattacaggcatgcgccaccacacctggctaatttttatagtttttagtagagacggggtttcaccatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46809511 169 + 50890351 tgtcgcccaggctagagtgcagtggtacaatcttggctcactgcaacctccacctcccaggttcaagcgattctcttgcctcagtctcccaagttgctgggattacaggcatgcgccaccacacctggctaatttttatagtttttagtagagacggggtttcaccatg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e calJac3.chr22 45383511 0 + 49145316 C e nomLeu3.chr10 102682427 3 - 106955855 I a score=28994.000000 s hg38.chr19_GL949747v2_alt 106985 12 + 729520 ttggtcaggctg s panTro4.chr19 59040502 12 + 63644993 ttggtcaggctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917976 12 + 60714840 ttggtcaggctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59968381 12 + 64156825 ttggtcaggctg i rheMac3.chr19 C 0 I 367 s macFas5.chr19 54986279 12 + 59248254 ttggtcaggctg i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47102202 12 + 51301725 ttggtcaggctg i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46809680 12 + 50890351 ttggtcaggctg i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45383511 12 + 49145316 ttacccaggctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e nomLeu3.chr10 102682427 3 - 106955855 I a score=-265.000000 s hg38.chr19_GL949747v2_alt 106997 1 + 729520 t s panTro4.chr19 59040514 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917988 1 + 60714840 g i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45383523 1 + 49145316 g i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e nomLeu3.chr10 102682427 3 - 106955855 I e chlSab2.chr6 46809692 1 + 50890351 I e papAnu2.chr19 47102214 1 + 51301725 I e macFas5.chr19 54986291 1 + 59248254 I e rheMac3.chr19 59968393 367 + 64156825 I a score=26094.000000 s hg38.chr19_GL949747v2_alt 106998 13 + 729520 tctcgaactcctg s panTro4.chr19 59040515 13 + 63644993 tctcaaactcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917989 13 + 60714840 tctcgaactcctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59968760 13 + 64156825 Tcttgaactcctc i rheMac3.chr19 I 367 C 0 s macFas5.chr19 54986292 13 + 59248254 tcttgaactcctg i macFas5.chr19 I 1 I 483 s papAnu2.chr19 47102215 13 + 51301725 tctcgaactcctc i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46809693 13 + 50890351 tcttgaactcctc i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45383524 13 + 49145316 gcttgaacttctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e nomLeu3.chr10 102682427 3 - 106955855 I a score=748703.000000 s hg38.chr19_GL949747v2_alt 107011 419 + 729520 acctca--tgatatgcccacctcagcctcccaaagtgccaggattacaggtgtgagccaccac-cccagcc-----ccatttttaaattgtttat-------agacagggtcgtgctctattacccaggctggg-------------------------cttgaactcctgtgctcaagtgagctttccacctcagcctccctaagtgttgagattacaggcttgagccgc-------tgtg-------tctggcctcttattatt-----------attattatttttttttttgagacagaatctcactc-tgttgcccaggctggagtgcagtgggatgatcctggctcatggcaacctccacctcccgggtccaggtgattctcctgcctcagtctcctgagtagctgggattacaggcgcccatgggttttgtttgtttg---tttgtttgtttgttt-gtttttcagacggagtcttgctctg s panTro4.chr19 59040528 407 + 63644993 acctca--tgatatgcccacctcagtctcccaaagtgccaggattacaggtgtgagccaccac-cccagcc-----ccatttttaaattgtttat-------agacagggtcgtgctctgttacccaggctggg-------------------------cttgaactcctgtgctcaagtgacctttccacctcagcctccctaagtgttgagattacaggcttgagccgc-------tgtg-------tctggcctcttattatt-----------attattttttttttttttgagacagaatctcactc-tgttgcccaggctggagtgcagtgggatgatcctgactcatggcaacctccacctcccgggtccaggtgattctcctgcctcagtctcctgagtagctgggattacaggcgcccatgggt---------------tttgtttgtttgttt-gtttttcagacggagtcttgctctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55918002 397 + 60714840 acctca--tgatatgcccacctcagcctctcaaagtgccaggattacaggcgtgagccaccac-cccagcc-----ccatttttaaatcgtttat-------agacagggtcgtgctctattacccaggctggg-------------------------cttgaactcctgtgctcaagtgacctttccacctcagcctccctaagtgttaaggttacaggcttgagccac-------tgtg-------tctggccTCTTACTAtt------------ttttgtttattctttttgagacagagtctcactc-tgtt--ccaggctggagtgcagtggcataatcctggctcatggaaa---ccacctcccgggtccaggtgattctcctgccttagtctcctgagtagctgggattacaggcgcccatgggt-------------------tttgtttgttt-gtttttcagacggagtcttgctctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59968773 412 + 64156825 acctca--tgatctgcccacctcattctcccaaagtgccgagatgacaggtgtgcgccaccac-cctggcc-----ccatttttaaattgtttat-------agacagggttgggctgtattgcccaggctggg-------------------------cttgaactcctgcgcccaagtgacccttccacctcagcctccctaagtgttgacattacaggcttgagcctc-------tgtg-------tctggcctcttattatt----------ttttatttatttattttttgagacagagtcttactc-tgttgcccaggctggagtgcagtggtgtgatctcagctgacagcaacctctacct-ccgggtccagttgattgtcctgcctcagtctcctgaatagctgggattacaagcgcccaccacc-------aaacc---tttgggtttttcttc-ttttttgagacggagtcttgctccg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54986788 413 + 59248254 acctca--tgatcttcccacctcagcctcccaaagtgctgagatgataggtgtgagccaccac-cctggcc-----ccatttttaaattgtttat-------agacagggttgggctgtattgcccaggctggg-------------------------cttgaactcctgcgcccaagtgacccttccacctcagcctccctaagtgttgacattacaggcttgagcctc-------tgtg-------tctggcctcttattatt----------ttttattcatttattttttgagacagagtcttactc-tgttgcccaggctggagtgcagtggtgtgatcccagctgacagcaacctctacctcccgggtccagttgattgtcctgcctcagtctcctgaatagctgggattacaagcgcccaccacc-------aaacc---tttgggtttttcttc-ttttttgagacggagtcttgctccg i macFas5.chr19 I 483 C 0 s papAnu2.chr19 47102228 414 + 51301725 acctca--tgatctgcccacctcagcctcccaaagtgccgggatgataggtgtgagccaccac-cctggcc-----ccatttttaaattgtttat-------agaCAGGGTtgtgctgtattgcccaggctggg-------------------------cttgaactcctgcgcCCAAGTGacccttctacctcagcctccctaagtgttgacattacaggcttgagcttc-------tgtg-------tctggcctcttattatt----------ttttatttatttattttgtgagacagagtcttactc-tgttgcccaggctggagtgcagtggtatgatcccagctgacagcaacctccacctcctgggtccagttgattgtcctgcctcagtctcctgaatagctgggattacaagcacccaccacc-------aaact---tttgggtttttcttctttttttgagacggagtcttgctccg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46809706 413 + 50890351 acctca--tgatctgcccacctcagcctcccaaagtgccaggatgataggtgtgagccaccac-cctggcc-----ccatttttaaattgcttat-------agacagggttgtgctgtatcgcccaggctggg-------------------------cttgaactcctgcgcccaagtgacccttccacctcagcctccctaagtattgacattacaggcttgagccgc-------tgtg-------tctggcctcttattatt----------ttttatttatttattttttgagacagagttttactc-tgttgcccagactggagtgcagtggtgtgatcccagctgacagcaacctccacctcccgggtccagttgattctcctgcctcagtctcctgaatagctgggattacaagcgcccaccact-------aaact---tttgggtttttcttc-ttttttgagacggagtcttgctccg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45383537 479 + 49145316 tgctcaagtgatccttccacctcagcctccctaagtgttgagattacaggcttcagccactgcgtctagccTCTTACTATAttttatttattcatgtttttgagatggagtctcactctgtcgcccaggctggagtgtgtgatttcagttcactgtgacctccacctcccaggtccaagtgattctcttgcctcagcctcttgggtagctgggat--caggcacctaccaccaAATTTTGTGGGGGTTTTTTGGTTGTTTGTTTTTTGAGACAGAGTCTCAttctttttttttttgagacggagtttcgctcttgttacccaggctggagtgcaatggctcaatctcggctcactgcaacctccgcctcctgggttcaggcaattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccacc-------atgcccagctaatttttgtattt-ttagtagagacggtgtttcaccttg i calJac3.chr22 C 0 I 108 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e nomLeu3.chr10 102682427 3 - 106955855 I a score=347375.000000 s hg38.chr19_GL949747v2_alt 107430 161 + 729520 tcacccaggctggagtgcaatgacatggtcttggctcactgcaaactccgcctcccaggttgaagtgattctcctgcctcagcctcccgaatagctgggattacaggcgcccgccaccacgcctggctaatttt-gta-tttttagcagagacggggtttcac s panTro4.chr19 59040935 161 + 63644993 ttacccaggctggagtgcaatgacgtggtctcggctcactgcaaactccgcctcccaggttgaagtgattctcctgcctcagcctcccgaatagctgggattacaggcgcccgccaccacgcctggctaatttt-gta-tttttagcagagacgggatttcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55918399 161 + 60714840 tcacccaggctggagtgcaatgacatggtcttggctcactgcaaactccgcctcccgggttgaagtgattctcctgcctcagcctccagaatagctgggattacaggcacccaccaccacgcctggctaatttt-gta-tttttaacaaagacggggtttcac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59969185 162 + 64156825 tcacccaggctggagtgcagtggcgtggtcttggctcaccgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccaaatagctgggactgcaggcgcctgccaccacgcatggctaatttt-gtattttttatcagagacggggttttac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54987201 161 + 59248254 tcacccaggctggagtgcagtggcgtggtcttggctcaccgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccaaatagctgggactgcaggcgcctgccaccacgcatggctaatttt-gta-tttttatcagagacggggttttac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47102642 161 + 51301725 tcacccaggctggagtgcagtggcgtggtctcggctcactgcaagctccgcctcctgggttcacgccgttctcctgcctcagcctcccaaatagctgggactgcaggcgcccgccaccacgcatggctaatttt-gta-tttttatcagagacggagttttac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46810119 161 + 50890351 tcgcccaggctggagtgcagtggcgtggtctcggctcaccgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccaaatagctgggactgcaggcgcccgccaccacgcatggctaatttt-gta-tttttatcagagatggggttttac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45384124 161 + 49145316 ttgcccaggttacagtgcagtggcgagatctcagctcactgcaacctgtacctcccaggttcaagccattctgctgcctcagcctccccagtagct-ggactagaggtgcctgccagcatgcctggctaattttggta-tttttagtagaggtggagttttac i calJac3.chr22 I 108 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e nomLeu3.chr10 102682427 3 - 106955855 I a score=258690.000000 s hg38.chr19_GL949747v2_alt 107591 96 + 729520 catttgggccaggctggtcttgaattgctgacctt--gtgatctgcccgcctcggcctcccaaagtgctgggattacaggtgtgacccaccgcgcccg s panTro4.chr19 59041096 96 + 63644993 catgttggccaggctggtcttgaattgctgacctt--gtgatctgcccgcctcagcctcccaaagtgctgggattacaggtgtgacccaccgcgccgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55918560 96 + 60714840 catgttggccaggctggtcttgaattgctgacctt--gtgatctgcccgcctcggcctcccaaagtgctgggattacaggtgcgacccaccgcgccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102682430 96 - 106955855 catgttggccaggctggtcttgaattgctgacctt--gtgatctgcccgcctcggcctcccaaagtgctgggattacaggtgtgagccaccgtgcctg i nomLeu3.chr10 I 3 C 0 s rheMac3.chr19 59969347 96 + 64156825 catgttgccccggctgctctccaactgctgacttc--atgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagccacagtgcccg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54987362 96 + 59248254 catgttgcccaggctgatctccaactgctgacttc--atgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagccacagtgcccg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47102803 96 + 51301725 catgttgcccaggctgatctccaactgctgacttc--atgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagctacggTGCCCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46810280 96 + 50890351 catgttgcccaggctgatctccaactgctgacttc--atgatccacccacctcggcctcccaaagtgctgggattacaggtgtgagccacagtgcccg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45384285 98 + 49145316 catattggccgggctggtcttgaacttctgacctcaaatgatctgtgtgcctcggtctcccaaagtgctagggttgctggtgttagccaccgcacctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I a score=222472.000000 s hg38.chr19_GL949747v2_alt 107687 92 + 729520 gccgagatggggttttaccatgttggccaggctggtctcgaactcctgacctcaaataa----tccgcctgcctcgtctcccaaagtgctgggatt s panTro4.chr19 59041192 96 + 63644993 gccgagatggggttttaccatgttggccaggctggtctcgaactcctgacctcaaataatctgtctgcctgccttgcctcccaaagtgctgggatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55918656 92 + 60714840 gccaagatggggttttaccatgttggccaggctggtctcgaactcctgacctcaaataa----tccgcctgcctcgcctcccaaagtgctgggatt i ponAbe2.chr19 C 0 M 1526 s nomLeu3.chr10 102682526 92 - 106955855 gccgagatggggttttaccacgttggccaggctggtctcgaactcctgacctcaaataa----tccacctgcctcgcctcccaaagtgctgggatt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59969443 92 + 64156825 gccgagatggggttttaccatgttggccaggctggtctccaactcctgacctcaaagaa----tctgcctgcttcgcctcgcaaagtgctgggatc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54987458 92 + 59248254 gccgagatggggttttaccatgttggccaggctggtctccaactcctgacctcaaagaa----tctgcctgcttcgcctggcaaagtgctgggatc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47102899 92 + 51301725 Gccgagatggggttttaccatgttggccaggctggtctccaactcctgacctcaaataa----tctgcctgcttcgcctcgcaaagtgctgggatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46810376 92 + 50890351 gccgagatggggttttaccatgttggccaggctggtctccaactcctgacctcaaataa----tctgcctgcttcgcctcgcaaagtgctgggatt i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e calJac3.chr22 45384383 0 + 49145316 C a score=22645.000000 s hg38.chr19_GL949747v2_alt 107779 13 + 729520 acCCTGTGCCTGG s panTro4.chr19 59041288 13 + 63644993 acCCTGTGCCTGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102682618 13 - 106955855 acCCTGTGCCTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59969535 13 + 64156825 acGCTGTGCCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54987550 13 + 59248254 acGCTGTGCCCGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47102991 13 + 51301725 acactgtgcctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46810468 13 + 50890351 acaCTGTGCCTGG i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45384383 0 + 49145316 C a score=1060010.000000 s hg38.chr19_GL949747v2_alt 107792 504 + 729520 CCCAGCCTCTTATTTATAACCAGTGTTGAGGGACTGTGTGGAG-CCGGGCACAGGCGAAGCAGGCAGGCTTCCTGCCCTGGTAGGACCTGGTTGCTATAAAAG-TCCTGCCAGGTGAGCAGAAGGAGCACACTTCCCCTC---CCCTGACCTCCAGTCACTGAGTCTCGGGAACCGGGGCTCGGCCAGGAGCGCCTTTACTTGGACTGAGGGGAATGTGGCCTGCAGACAGTCAGGAGAG--TTTCC-----AGGGGACAGCAGGGGCTGTCCTAGCGGGTGGCATGAAACC---GTCTCCCTGGAGAGGTTAAGGAAGAGCAACTCCAGGGGTTCCATTTACTATGTGCTCCGGAGCTGGGCTACACGGTGGTACTAAGGAGGCAGCGCTAGTCACCTGACCTACAAGGTC-------GGGCTTCTGTTAGTTACCTAAGAGATGTTACCAGGACAAGCAGCAG-CCTGGTGGGAAGATGATGCCTCCAGGTCTCTACCTCCTCTCTCTCTCCCTCCTT--CTCTCCA s panTro4.chr19 59041301 504 + 63644993 CCCAGCCTCTTATTTATAACCAGTGTTGAGGGACTGTGTGGAG-CCGGGCACAGGCGAAGCAGGCAGGCTTCCTGCCCTGGTAGGACCTGGTTGCTATAAAAG-TCCTGCCAGGTGAGCAGAAGGAGCACACTTCCCCTC---CCCTGACCTCCAGTCACTGAGTCTTGGGAACCGGGGCTCGGCCAGGAGCACCTTTACTTGGACTGAGGGGAATGTGGCCTGCAGACAGTCAGGAGAG--TTTCC-----AGGGGACAGCAGGGGCTATCCTAGCAGGTGGCATGAAACC---GTCTCCCTGGAGAGGTTAAGGAAGAGCAACTCCAGGGGTTCCATTTACTCTGTGCTCCAGAGCTGGGCTTCACGGTGGTACTAAGGAGGCAGCGCTAGTCACCTGACCTACAAGGTC-------AGGCTTCTGTTAGTTACCTAAGAGATGTTACCAGGACAAGCAGCAG-CCTGGTGGGAAGATGATGCCTCCAGGTCTCTACCTcctctctctctccctcctt--ctctcca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102682631 502 - 106955855 CCCAGCCTCTTATTTATAACCAGCTTTGGGGGGCTGTGTGGAG-CCGGGCACAGGTGAAGCAGGCAGGCTCCCTGCCCTGGTAGGACCTGGTTGCTATGACAG-TCCTGCCAGGTGAGCAGAAGGAGCACACTTCCCCTC---CCCTGACCTCCAATCACTGAGTCTTGGGAACCGGGGCTTGGCCAGGGGCACCTTTTCTTGGGCTGAGGGGAATGTGGCCTGCAGACAGTCGGGAGAG--TTTCC-----AGGGGACAGCAGGGGCTGTCCTAGCGGGTGGCATGAAACC---GTCTCCCTGGAGAGGTCATGGAAGAGCAACTCCAGGGCTTCCATTTACTCTGTGCTCCAGAGCTGGGCTTCACGGTGGCACTAAGGAGGCAGCGCTAGTCACCTGACCTACAAGGTC-------GGGCTTCTGTTAGTTACCTAAGAGATGTTACCAGGACAAGCAGCAG-CCTGGTGGGAAGATGATGCCCCCAGGTCTCCACCTC--ccctctctccctccct--ctctcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59969548 505 + 64156825 CCCAGTCTCTTATTTATAACCAGTTTTGAGGGGCTGCGTGGAGTCCGGGCACGGGTGAAGCAGGCAGGCTGCCTGCTCTGATAGGACCTGGTTGCTCTGAAAGTTCCTGCCAGGTGAGCAGAAGGAGCACACGTCCCCTC---CCCTGACCTCCAGTCGTTGAATCTTGGGAACTGGGGCTTGGCCAGGGGCACCTTTACTTGGGTTGAGGGGAATGTGGCCTGCAGACAGTCGGGAGAA--TTTCCAGGTGAGGGGACGGCAGGGGCTGTCCTATCGGGCAGCATGAAACC---GTCTCCCTGGAGAGGTT----AAGAGCAACTCCAGGGGTTCCATTTACTCCGTGCTCCAGAGCTGGGCTTCACAGTGGTACTGAGGAGGCAGCGCTAGTCACCTGACCTACGAGGTC--------GGCTTC-GTTAGTTACCTAAGACATGTTACCAGGACAAGCAGCAG-CCTGGTGGGAAGACGATGCCTCCT--TCTCCACCTTccctccctctccctccctccctctcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54987563 505 + 59248254 CCCAGTCTCTTATTTATAACCAGTTTTGAGGGGCTGCGTGGAGTCCGGGCACGGGTGAAGCAGGCAGGCTGCCTGCTCTGATAGGACCTGGTTGCTCTGAAAGTTCCTGCCAGGTGAGCAGAAGGAGCACACGTCCCCTC---CCCTGACCTCCAGTCATTGAATCTTGGGAACTGGGGCTTGGCCAGGGGCACCTTTACTTGGGTTGAGGGGAATGTGGCCTGCAGACAGTCGGGAGAA--TTTCCAGGTGAGGGGACGGCAGGGGCTGTCCTATCGGGCAGCATGAAACC---GTCTCCCTGGAGAGGTT----AAGAGCAACTCCAGGGGTTCCATTTACTCCGTGCTCCGGAGCTGGGCTTCACGGTGGTACTGAGGAGGCAGCGCTAGTCACCTGACCTACGAGGTC--------GGCTTC-GTTAGTTACCTAAGAGATGTTACCAGGACAAGCAGCAG-CCTGGTGGGAAGACGATGCCTCCT--TCTCCACCTTCCCTCCCTCTCCCTCCCTCCCTCTCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103004 494 + 51301725 cccggtCTCTTATTTATAACCAGTTTTGAGGGGCTGCGTGGAGTCCGGGCACGGGTGAAGCAGGCAGGCTGCCTGCTCTGATAGGACCTGGTTGCTCTGAAAGTTCCTGCCAGGTGAGCAGAAGGAGCACACTTccccccccGCCCCGACCTCCAGTCACTGAATCTTGGGAACCGGGGCTTGGCCAGGGGCACCTTTACTTGGGCTGAGGGGAACGTGGCCTGCAGATAGTCGGGAGAA--TTTCCAGGCGAGGGGACAGCAGGGGCTGTCCTATCGGGTGGCATGATACC---GTCTCCCTGGAGAGGTT----AAGAGCAACTCCAGGGGTTCCATTTACTCCGTGCTCCGGAGCTGGGCTTCACAGTGGTACTGAGGAGGCAGCGCTAGTCACCTGACCTATGAGGTC--------GGCTTC-GTTAGTTACCTATGAGATGTTACCAGGACAAGCAGCAG-CCTGGTGGGA--ACGatgcctccc--tct------------ctccaccttccctccctctcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46810481 504 + 50890351 CCCGGTCTCTTATTTATAACCAGTTTTGAGGGACTGCGTGGAGTCCGGGCACGGGTGAAGCAGGCAGGCTGCCTGCTCTGATAGGACCTGGTTGCTCTGAAAGTTCCTGCCAGGTGAGCAGAAGGAGCACACTTCCCCCTC--CCCCGACCTCCAGTCATTGAGTCTTGGGAACCGGGGCTTGGCCAGGGGCACCTTTACTTGGGCTGAGGGGAATGTGGCCTGCAGACAGTCGGGAGAA--TTTCCAGGCGAGGGGACGGCAGGGGCTGTCCTATCGGGTGGCATGAAACC---ATCTCCCTGGAGAGGTT----AAGAGCAACTCCAGGGGTTCCATTTACTCCGTGCTCCGGAGCTGGGCTTCACAGTGGTACTGAGGAGGCAGCGCTAGTCACCTGACCTACGAGGTC--------GGCTTC-GTTAGTTACCTGAGAGATGTTACCAGGACAAGCAGCAG-CCTGGTGGGAAGATGATGcctccc--tctccacctcccctctctctccctccct--cTTTCCA i chlSab2.chr6 C 0 I 129 s calJac3.chr22 45384383 499 + 49145316 cccAGCCTC--ATTTATAACCAGTGTGAAGCGGCTGTGTGCAGCCCTGGCAAAGGGAAAGCGGGCAGGCTCCCTGCCCTGGTAGGACCTGGTTGCTGTGAAAGCTGCTGCCAGGTGAGCAGCAGGAGCAC-------------ACCCGCCCTCCAGTCATGGAGTCTTGGTAACCGGGGCTCGGCCAGGGACACCTTTACTTGAGCTGAGGGGACTGTGGCCTGCAGACAGTCGGGAAAGGCTTTCCAGGAGAGGAGACAGCAGGGGCTGTCCTAGTGGGTGGCAGGAAACCGTGGTCTCCCTGGAAAGGTTAAGGAAGAGCAGCTCAAGGGGTTCCACTTACTCTGTGCTCCGGAGCTGGGCTTCACAGTGGTACTAAGGAGGCC---CTCGTCACCTGAGCTATGAGGTCCAGGTCGGGGCGTCTGTTAGTTACCTAAGGCATGTTACCAGGGCAGGCAGCAGCCCTGGTGGCAAGATGATGCCTCCACGTCTCCACCT----------TCCCTCTCT--CTCTCCA i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e ponAbe2.chr19 55918748 1526 + 60714840 M a score=134224.000000 s hg38.chr19_GL949747v2_alt 108296 131 + 729520 CCT------CCCCTCTCTCTCCCTCCCTCTCTCCACCTCCCCTCTCTCT----CTTCCTCCCTCTCCACCTCCCCTCTCTCTCCCTCCCTCTCTCCACCTCCCCTCTCT------------------------CTCCCTCCCTCTCTCCACCTCCCCTCTCTCTC s panTro4.chr19 59041805 155 + 63644993 cct------cccctctctccccctccctctctccacctcccctctctct----cttcctccctctccacctcccctctctctcttcttccctctccacctcccctctctctccctccctctctccacctccccctccctccctctctccacctcccctctctccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102683133 112 - 106955855 ccttcctcccctctctccctcccttcttctctccacctcccctct-----------------------------ctctccctccctccctctctccacctcccctctct------------------------ctccctcactctctccacctaccctctctccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59970053 123 + 64156825 cct------cccctctccctcc------ctctccacctcccctctgtca----ccctccatctctccacctcccccctctctccctcc--ctctccacctcccctctgt------------------------caccctccatctctccacctcccctctctccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54988068 131 + 59248254 CCT------CCCCTCTCTCACCCTCCATCTCTCCACCTCCCCTCTCTCC----ACCTCCATCTCTCCACCTCCCCTCTCTCTCCCTCCCTCTCTCCACCTCCCCTCTCT------------------------CACCCTCCATCTCTCCACCTCCCCTCTCTCAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103498 125 + 51301725 cct------cccctctctctccctccctctctccacctcccctctctcaccctccctccctctctccacctcccctctctcaccctccctctctccatctt----------------------------------ccctccctctctccacctcccctctctcac i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45384882 112 + 49145316 --------CCTTTCCACAATTTCTCCCTCTTTCCATTTTCcctctctct----------------------accttccctctcccttcctctctacaccttccctctcc-----------------------ccaccacccctctccccaccttccctctccCTC i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e ponAbe2.chr19 55918748 1526 + 60714840 M e chlSab2.chr6 46810985 129 + 50890351 I a score=629.000000 s hg38.chr19_GL949747v2_alt 108427 6 + 729520 -TCCCTC s panTro4.chr19 59041960 6 + 63644993 -tccctc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59970176 4 + 64156825 ---tccc i rheMac3.chr19 C 0 M 2760 s macFas5.chr19 54988199 4 + 59248254 ---CCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103623 4 + 51301725 ---cctc i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45384994 7 + 49145316 TCTACTC i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e ponAbe2.chr19 55918748 1526 + 60714840 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I a score=3964.000000 s hg38.chr19_GL949747v2_alt 108433 5 + 729520 CCTCT s panTro4.chr19 59041966 5 + 63644993 cctct i panTro4.chr19 C 0 C 0 s macFas5.chr19 54988203 5 + 59248254 CATCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103627 5 + 51301725 cctct i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45385001 5 + 49145316 CCTCT i calJac3.chr22 C 0 M 968 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e ponAbe2.chr19 55918748 1526 + 60714840 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=36823.000000 s hg38.chr19_GL949747v2_alt 108438 125 + 729520 CTCCACCTCCCCT----------GTCTCCACCTCCCCTCC-----CTCTGTCCCTCCCTCTCTCCACCT-CCCCTCCCTCTGTCC-----------CTCCCTCTCTCCACCTCCCCTCTCT--CTCCCTCCCTCTCTCCACCTCCCCTCTCTCT s panTro4.chr19 59041971 153 + 63644993 ctccacctaccctccctccctccgtctccaccttccctcctctctctccctccctccctctctcccacc-tccctccctctctccatctcccctctctccctctctccagctcccctctctccctccctccctctctccacctcccctctctct i panTro4.chr19 C 0 C 0 s macFas5.chr19 54988208 104 + 59248254 CTCCACCTCCCCTCTCT--------------------------------CACCCTCCATCTCTCCACCT-CCCCTCTCTCCCT---------------CCCTCTCTCCACCTCCCCTCTCT--CACCCTCCATCTCTCCACCTCCCCTCTCTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103632 137 + 51301725 ctccaccttccctccctctctcgg--tccaccttcc---------ctcgctccctccctctccccacctgcccctccctccctct----ccccacctcccctttccccacttcccctctct--caccctccctcgctccacctcccctctctct i papAnu2.chr19 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=7770.000000 s hg38.chr19_GL949747v2_alt 108563 18 + 729520 CTTCCTCCCTCTCCACCT s panTro4.chr19 59042124 14 + 63644993 ----cgctctctccacct i panTro4.chr19 C 0 C 0 s macFas5.chr19 54988312 18 + 59248254 CCCTCCCTCTCTCCACCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103769 18 + 51301725 gcctccctctctccacct i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19605892 18 - 122678785 CCTCCTACCTCTGCCCAT i canFam3.chr1 I 94 C 0 e mm10.chr7 3641526 2427 + 145441459 I e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=10926.000000 s hg38.chr19_GL949747v2_alt 108581 38 + 729520 CCCCTCTCTCTCTTCCTCCCTCTCCACCTCCC--CTCTCT s panTro4.chr19 59042138 32 + 63644993 cccctctccct--------ctctccacctcccctctctct i panTro4.chr19 C 0 C 0 s macFas5.chr19 54988330 38 + 59248254 CCCCTCTCTCACCCTCCATCTCTCCACCTCCC--CTCTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103787 36 + 51301725 ctcctctct--ccctctctctctccagctccc--ctctct i papAnu2.chr19 C 0 I 2 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=15564.000000 s hg38.chr19_GL949747v2_alt 108619 98 + 729520 CCCTCCCTCTCTCCACCTCCCCTG----------TCTCCACCTCCCCTCCCTCTGTCCCTCCCTCTCTCCACCTCCCCTCTCTCTGTCCCTCCCTCTCTCCACCTCCC s panTro4.chr19 59042170 102 + 63644993 ccctctctctctccacctcccctctcttcctccttctccacctcccctctctc--tccctccctctctccacctcccctctc----tccctccctctctccacctccc i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47103825 76 + 51301725 ccctccctctctccagctcccctc----------tct------------------cacctccctctccccacctcccctctc----tccttccctctcctcacaTCCC i papAnu2.chr19 I 2 I 143 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I e macFas5.chr19 54988368 0 + 59248254 C e rheMac3.chr19 59970180 2760 + 64156825 M a score=-93.000000 s hg38.chr19_GL949747v2_alt 108717 9 + 729520 C-------TCTCTCTG s panTro4.chr19 59042272 16 + 63644993 ccccaccttccctctc i panTro4.chr19 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988368 0 + 59248254 C e rheMac3.chr19 59970180 2760 + 64156825 M a score=8774.000000 s hg38.chr19_GL949747v2_alt 108726 36 + 729520 TCCCTCCCTCTCTCCACCTCCCCTCTCTCTCCCTCC s panTro4.chr19 59042288 36 + 63644993 tctctccctccctctacctcccctctccctccctcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102683245 36 - 106955855 tccctccctctctccACCTTCCCTCTCTCTCCCTCA i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e chlSab2.chr6 46810985 129 + 50890351 I e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988368 0 + 59248254 C e rheMac3.chr19 59970180 2760 + 64156825 M a score=5304.000000 s hg38.chr19_GL949747v2_alt 108762 16 + 729520 CTCTCTCCACCTCCCC s panTro4.chr19 59042324 15 + 63644993 ctctctccacctacc- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102683281 16 - 106955855 CTCTCTCCACCTCCCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54988368 16 + 59248254 CACCCTCCATCTCTCC i macFas5.chr19 C 0 I 4 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e chlSab2.chr6 46810985 129 + 50890351 I e papAnu2.chr19 47103901 143 + 51301725 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=7000.000000 s hg38.chr19_GL949747v2_alt 108778 32 + 729520 TCTCTCTCCCTCCCTCTCTCCAC-----CTCCCCTCT s panTro4.chr19 59042339 36 + 63644993 -ctccctccctccctctctccaccttcactcccctct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102683297 32 - 106955855 TCTCTCTCCCTCTCTCTCTCCAC-----CTACCCTCT i nomLeu3.chr10 C 0 M 619 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e chlSab2.chr6 46810985 129 + 50890351 I e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988384 4 + 59248254 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=4684.000000 s hg38.chr19_GL949747v2_alt 108810 64 + 729520 CTCTGTCCCTCCCTCTCTCCACCTCCCCTCT------CTCTCTCCCTCCCTC--TCCACCTCCCCTCTCTCC s panTro4.chr19 59042375 72 + 63644993 ctccctccctccctctctccaccttccctctccccacctctctccctccctctgtccacctcccctctctcc i panTro4.chr19 C 0 I 483 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683329 619 - 106955855 M e chlSab2.chr6 46810985 129 + 50890351 I e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988384 4 + 59248254 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=6999.000000 s hg38.chr19_GL949747v2_alt 108874 96 + 729520 ACCTCCCCTCACTCCACCTTCCCTCTCTCTCCCTC--TCTCTCCTCCCCTCTCCCTCCCTCC----ACCTCCCCTCCCTCTCTCCACCTCCCCTCCCTCTCT s panTro4.chr19 59042930 101 + 63644993 ccctccc-tctctccacctcccctctccctccctccctctctcctcccctctccctccctccctccacctcccctccctctctccacctcccctccttctct i panTro4.chr19 I 483 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683329 619 - 106955855 M e chlSab2.chr6 46810985 129 + 50890351 I e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988384 4 + 59248254 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=16285.000000 s hg38.chr19_GL949747v2_alt 108970 100 + 729520 CCCTCCCTCCCTCCCTCTCTCCACCTTCCCTCT----CCCTCCCTCCACCTTCCCTCT----CCCTCCCTCCACCTTCCCTCTCCCTCCCTC--TCCACCTTCCCTCTCT s panTro4.chr19 59043031 75 + 63644993 ccctccctccctctctc-----------------------------caccttccctct----ccctccctccaccttccctctccctccctc--tccaccttccctctct i panTro4.chr19 C 0 C 0 s chlSab2.chr6 46811114 110 + 50890351 CCCTCTCTCCCTCCCTCTCTTCACCTTCCCTCTCTCCCTCTCTCTCCACCTTCCCTCTCTCCCTCTCTCTCCAGCTCCCCTCTCCCTCTTTCTGTCCACCTTCCCTCTCT i chlSab2.chr6 I 129 I 11 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683329 619 - 106955855 M e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988384 4 + 59248254 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=9422.000000 s hg38.chr19_GL949747v2_alt 109070 27 + 729520 CCTCCCCTCTCCCTCCCTCTCTCCACC s panTro4.chr19 59043106 17 + 63644993 cc----------ctccctctctccacc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59973000 27 + 64156825 cctcccctcaccctccctctctccacc i rheMac3.chr19 M 2760 I 5 s chlSab2.chr6 46811235 27 + 50890351 TCCCCTCTCTCCCTCCCTCTCTCCACC i chlSab2.chr6 I 11 I 5 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683329 619 - 106955855 M e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988384 4 + 59248254 I a score=3760.000000 s hg38.chr19_GL949747v2_alt 109097 6 + 729520 TCCCCT s panTro4.chr19 59043123 6 + 63644993 tcccct i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59973032 6 + 64156825 tctccc i rheMac3.chr19 I 5 C 0 s papAnu2.chr19 47104044 6 + 51301725 tcttct i papAnu2.chr19 I 143 C 0 s chlSab2.chr6 46811267 6 + 50890351 TCTCCC i chlSab2.chr6 I 5 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683329 619 - 106955855 M e macFas5.chr19 54988384 4 + 59248254 I a score=27227.000000 s hg38.chr19_GL949747v2_alt 109103 42 + 729520 CTCTCCCTCCCTCCC----TCCCTC----TCTCCACCTTCCCTCTCTCCC s panTro4.chr19 59043129 45 + 63644993 ctctccctccctccc----tccctccctctctccacctatcctctctcc- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59973038 42 + 64156825 cacctcccctcaccc----tccctc----tctccacctcccctctctctc i rheMac3.chr19 C 0 I 17 s papAnu2.chr19 47104050 41 + 51301725 ttctttctctctccc----tccctg----tctccaccttccctctctcc- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46811273 46 + 50890351 CACCTCCCCTCTCTCACCGTCCCTC----TCTCCACCTCCCTTCTCTCTC i chlSab2.chr6 C 0 I 17 s calJac3.chr22 45385976 36 + 49145316 ctcaccttcccttcc----tatctc----tctctaccttttctc------ i calJac3.chr22 M 968 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e nomLeu3.chr10 102683329 619 - 106955855 M e macFas5.chr19 54988384 4 + 59248254 I a score=6780.000000 s hg38.chr19_GL949747v2_alt 109145 9 + 729520 TCCCTCTCT s rheMac3.chr19 59973097 9 + 64156825 tccctctct i rheMac3.chr19 I 17 C 0 s macFas5.chr19 54988388 9 + 59248254 TCCCTCTCT i macFas5.chr19 I 4 C 0 s chlSab2.chr6 46811336 9 + 50890351 TCCCTCTCT i chlSab2.chr6 I 17 C 0 s calJac3.chr22 45386012 7 + 49145316 --catctct i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e nomLeu3.chr10 102683329 619 - 106955855 M e papAnu2.chr19 47104091 0 + 51301725 C e panTro4.chr19 59043174 0 + 63644993 C a score=31992.000000 s hg38.chr19_GL949747v2_alt 109154 23 + 729520 CCACCTTCCCTCTCTCTCTCTCC s panTro4.chr19 59043174 12 + 63644993 ------tccc-----ctctctcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102683948 21 - 106955855 ccaccttccc--tctctctctcc i nomLeu3.chr10 M 619 C 0 s rheMac3.chr19 59973106 21 + 64156825 ccacctcccc--tcactctctcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54988397 21 + 59248254 CCACCTCCCC--TCACTCTCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47104091 19 + 51301725 --acctcccc--tctctctctcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46811345 21 + 50890351 CCACCTCCCC--TCTCTCTCTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45386019 20 + 49145316 ccgccttccc--tctctctccc- i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M a score=311701.000000 s hg38.chr19_GL949747v2_alt 109177 126 + 729520 CTCCCTCTCTCCAGCTCATGCTATCTGGGTCTCCCTCTGACTTTCTAGGTCCTGTCTGAGATTTTGCT--CTTTCTGTTCCCCTCTCTGGGCCTCCCCGTCACCACTCTGTGTATCTCTGGATCCCTG-- s panTro4.chr19 59043186 126 + 63644993 ctccctctctccAGCTCATGCTATCTGGGTCTCCCTCTGACTTTCTAGGTCCTGTCTGAGATTTTGCT--CTTTCTGTTCCCCTCTCTGGGCCTCCCTGTCACCACTCTGTGTATCTCTGGATCCCTG-- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102683969 126 - 106955855 ctccctctctccAGCTCATGCTTTCTGGGTCTCCCTCTGACTTTCTAGGTCCTGTCTGAGATTTTGCT--CTTTCTGTTCCCCGTTCTGGGCCTCCCCGTCACCACTCTGTGTGTCTCTGGATCCCTG-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59973127 126 + 64156825 ctccctctTTCCAGCTTATGCTATCTGGGTCTCCCTCTGACTTTTTAGGTCCTGTCTGAGATTTTGCT--CTTTTTGTTGCCCTCTCTGGGCCTCCCCGTCACCACTCTCTGTATCTCTGGATCCCTG-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54988418 126 + 59248254 CTCCCTCTTTCCAGCTCATGCTATCTGGGTCTCCCTCTGACTTTTTAGGTCCTGTCTGAGATTTTGCT--CTTTTTGTTCCCCTCTCTGGGCCTCCCCGTCACCACTCACTCTATCTCTGGATCCCTG-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47104110 126 + 51301725 ctccctctttccagcTCATGCTATCTGGGTCTCCCTCTGACTTTTTAGGTCCTGTCTGagattttgct--ctttttgttcccctctctgggcctccctgTCACCACTCTCTGTATCTCTGGATCCCTG-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46811366 126 + 50890351 CTCCCTCTTTCCAGCTCATGCTATCTGGGTCTCCCTCTGACTTTTTAGGTCCTGTCTGAGATTTTGCT--CTTTTTGTTCCCCTCTCTGGGCCTCCCCGTCACCACTCTCTGTATCTCTGGATCCCTG-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45386039 116 + 49145316 ---------tccgcctcatgctatctgggtctccctctGA-TTTCTAGGTCCTGTTTGAGATTTTGCT--GTTTCTATTCCCCTCTCTGGGCCTCCCTGTCACCACTCTGTGCATCTCTGGATCCCTG-- i calJac3.chr22 C 0 I 4 s canFam3.chr1 19605910 118 - 122678785 CTCCTGCCCTGCAGTTCACACTTTCT--------CTCTGGGGCTCTGG---CTGTCCGAGATCTATCTCCCTCTCTTTTCCTCTTTCTGGGCTGCCCT-CCACCCCCCACTGTCATACTTGCTCTGAGTG i canFam3.chr1 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e ponAbe2.chr19 55918748 1526 + 60714840 M a score=1716115.000000 s hg38.chr19_GL949747v2_alt 109303 559 + 729520 TCCTTCAACCCAGAGCTCTGTCTCTGGACCTCAG-TGGCAATCTC-TAAATCTCTCTCCTTCCTCAAGTCAAAAAGTCGACA-CACTCAGGAGGTTCCCTTGAGTGGCTGAACTACCCCAGGTTGTATAACTCAAGTCTGTTTTCTCAA--TGTTATCCCTGACCCTCTGGGTCAACCCTGTTTGAAAATGACAACCTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCCGTGGTCCACAACCCTGTTCAGAATCCCCCATCTCCCTTGGCCAAAATATCCGGCATCTACCAATGGGGCTGTGGCATGAGGGTGTCAATCTCAGGAAAGGAATCTTGAGTCGCCTGGGCCTGCAGCCCT----CGTACTTTCAGAAcagaggttctcagaatttaatgcgcttcagaattacactgag-gacttgttaaaa-catagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaaaatgtgcctttcaaacaagttcccaggtgatgggtacgtgcctgacccaaggccacatttcagaagcactgCTCTAGAAAA s panTro4.chr19 59043312 559 + 63644993 TCCTTCAACCCAGAGCTCTGTCTCTGGACCTCAG-TGGCAATCTC-TAAATCTCTCTCCTTCCTAAAGTCAAAAAGTTGACA-CACCCAGGAGGTTCCCTTGAGTGGCTGAACTACCCCAGGTTGCATAACTCAAGTCTGTTTTCTCAA--TGTTATCCGTGACCCTCTGGGTCAACCCTGTTTGAAAATGACAAGTTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCCGTGGTCCACAACCCTGTTCAGAATCCCCCATCTCCCTTGGCCGAAATATCCGGCATCTACCAATGGGGCTGTGGCATGAGGGTGTGAATCTCAGGAAAGGAATCTCGAGTCGCCTGGGTCTGCAGCCCT----AGTACTTTCAGAAcagaggttctcaaaatttaatacgcttcagaattacactgag-ggcttgttaaaa-catagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaaaatgtgcctttcaaacaagttcccaggtgatgggtatgtgcctgacccaaggccacatttcagaagcactgCTCTAGAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55920282 560 + 60714840 TCCTTCAACCCAGAGCTCTGTCTCTGGACCTCAGTTGGCAATCTC-TAAATCTCTCTCCTTCCTCAAGTCAAAAAGTCGACA-CACCCAGGAGGTTCCTTTGAGTGGCTGAACTACCCCAGGTTGCATAACTCAAGTCTGTTTTCTCAA--TTTTATCCCTGACCCTGTGGGTCAACCCTGTTTGAAAATGACAACCTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCCATGGTCCACAATCCTGTTCAGAATCCCCCATCTCCCTTGGCCAAAATATCCGGCATCTACCAATGGGGCTGTGGCATGAGGGTGTGAATCTCAGGAAAGGAATCTTGAGTCACCTGGGCCTGCAGCCCT----AGTAGTCTCAGAAcagaggttctcaaaatttaatacgcttcagaattacactgag-ggcttgttaaaa-catagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaaaatgtgcctttcaaacaagttcccaggtgatgggtacgcgcctgacccaaggccacatttcagaagcactgCTGTAGCAAA i ponAbe2.chr19 M 1526 C 0 s nomLeu3.chr10 102684095 555 - 106955855 TCCTTCAACCCAGAGCTCTGTCTCTGGACCTCAG-TGGCAATCTC-TGAA--TCTCTCCTTCCTCAAGTCAAAAAGTTGACA-CACCCAGGAGGTTCCTTTGAGTGGCTGAACTACCCCAGGTTGCATAACTCAAGTCTGTTTTCCCAA--TTTTATCCCTGACCCTCTGGGTCAACCCTGTTTGAAAATGACAACCTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCCGTGGTCCACAGCCCTGTTCAGAATCCCCCATCTCCCTTGGCCAAAATATCTGGCATCTACCAATGGGGCTGTGGCATGAGGGCGTGAATCTCAGGAAAGGAATCTTGAGTCACCTGGGCCTGCAGCCCT----AGTGCTCTAAGAAcagaggttctcaaaatttaatacgcttcagaattacaccaag-ggcttgttaaaa-catagttgctaggcccagagtttctgattc----agtctagggtggg-gctcaaaaatctgcctttcaaacaagttcccaggtgatgggtatgcgcctgacccaaggccacattgcagaagcactgCTCTAGAA-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59973253 550 + 64156825 TCCTTCATCCCAGAGCTCTGTCCCAGGACCTCAG-TGGCAATCTC-TGAATCTCTCTCCTCCCACAAGTCAAAAAGTCGACA-CACCTGGGAGCTTCCTT----TGGCCAAACTACCCCAGGTTGCCTAAGTCAAGTCTCTTTCCTCCA--TTTCATCCCTGACCCTTTGGGTCAACCCTGTTTGAAAATGACAGCCTTTGCTGATCTCTACATACTGTTCTGCCAGGGAAGGACCTGTGGTCCCCAGCTGTGTTCAGAATCTCTCATCTCCCTTGGCCAAAATATCTGGCATCTACCAATGGGGCTGTGGCACGAGGGTGTGAGTCTCAGGAAAGGAATCT-GAGTCACCTGGGCCTGCAGCCCT----GGTAC--TCAGAAcagaggttctccaaatttaatacgcttcagaatcacaccgag-ggcttgttaaaa-cacagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaagatgtgcatttcaaacaagttcccaggtgataggtatgcgcctgatccaaggccgcattggagaagccctgCTCTAGAA-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54988544 552 + 59248254 TCCTTCATCCCAGAGCTCTGTCTCAGGACCTCAG-TGGCAATCTC-TGAATCTCTCTCCTCCCGCAAGTCAAAAAGTCGACA-CACCTGGGAGCTTCCTT----TGGCCAAACTACCCCAGGTTGCCTAAGTCAAGTCTCTTTCCTCCA--TTTCATCCCTGACCCTTTGGGTCAACCCTGTTTGAAAATGACAGCCTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCTGTGGTCCCCAGCTGTGTTCAGAATCTCTCATCTCCCTCGGCCAAAATATCTGGCATCTACCAATGGGGCTGTGGCACGAGGGTGTGAGTCTCAGGAAAGGAATCT-GAGTCACCTGGGCCTGCAGCCCT----GGTAC--TCAGAAcagaggttctccaaatttaatacgcttcagaatcacaccgag-ggcttgttaaaa-cacagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaagatgtgcatttcaaacaagttcccaggtgataggtatgcgcctgatccaaggccgcatcggagaagccctgCTCTAGAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47104236 555 + 51301725 TCCTTCATCCCAAAGCTCTGTCTCAGGACCTCAG-TGGCAATCTCTTgagtctctctcttccctcaagTCAAAAAGTCGACA-CCCCTGGGAGCTTCCTTTGAGTGGGCAAACTACCCCAGGTTGCCTAAGTCAAGTCTCTTTCCTCCA--TTTCATCCCTGACCCTTTGGGTCAACCCTGTTTGAAAATGACAGCCTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCTGTGGTCCCCAGCTCTGTTCAGAATCCCCCGTCTCCCTTGGCCAAAATATCTGGCATCTACCAATGGGGCTGTGGCACGAGGGTGTGAATCTCAGGAAAGGAATCT-GAGTCACCTGGGCCTGCAGCCCT----GGTAC--TCAGAACAGAGGTTCTCCAAATTTAATACGCTTCAGAATCACAccgag-ggcttgttaaaa-cacagttGCTGggcccagagtttctgattc----agtctaGGGTGGG-GCTCAAAGATGTGCATTTcaaacaagttcccaggtgataggTATGCGCCTGATCCAAGGCCGCACTGGAGAAGCCCTGCTCTAGAA-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46811492 555 + 50890351 TCCTTCATCCCAGAGCTCTGTCTCAGGACCTCAG-TGGCAATCTC-TGAATCTCTCTCCTCCCGCAAGTCAAAAAGTCGACA-CACCTGGGAGCTTCCTATGAGTGGCCAAACTACCCCAGGTTGCCTAAGTCAAGTCTCTTTCCTCCA--TTTCATCCCTGACCCTTTGGGTCAACCCTGTTTGAAAATGACAGCCTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCTGTGGTCCCCAGCTCTGTTCAGAATCTCCCATCTCCCTTGGCCAAAATATCTGGCATCTACCAATGGGGCTGTGGCACGGGGGTGTGAATCTCAGGAAAGGAATCT-GAGTCACCTGGGCCTGCAGCCCT----AGTAC--TCAGAAcagaggttctccaaatttaatacgcttcagaatcacaccaag-ggcttgttaaaa-cacagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaagatgtgcattt-aaacaagttcccaggccataggtctgcgcctgatccaaggcctcatttgcgaagccctgCTCTAGAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45386159 539 + 49145316 TCCTTCAACCCAGAGCTCTGTCTCTGGACCTCAG-TGACAATCTC-TGAATTTCTCTCCTCCCTCAAGTCAAAAAGTCATCA-TACCTGGGAGGCTCCTCTGAGTGGCCGAACTACCCCAGGATGCATAACTGAAGTCTGTTTCCTCAA--TTGTATCCCTGACCCTCTGAGTCAACCCCGTTTGGAAATGACAGC-------------------CTGGTCTGCCAGGGAAGGACTGGTGGTCCACAACACTGTTCAGAATCCCCCATCTCCCTCGGCCAAAATATCTGGCATCTACCAGTGGGGCTGTGGCATGAGGGTGTGAATCTCAGGAGAGGAATCT-GAGTCACGTGGCCCTGCGGCCCT----AGTGTGCTCAGAAcagaggttctcaaaatttaatacgcttcagaattctacagag-ggcttgttaaaa-catagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaaaatgtgcatttcaaacaagtttccaggtgatgggtatgtggctgatacaaggccacatttgagaaGCTTTGCTCTAGAAAA i calJac3.chr22 I 4 C 0 s canFam3.chr1 19606028 494 - 122678785 TGTCTCAGTTCAGGGCTCACTCTGGGGACCTCAG-CAGC--TCTT-TGAACCTCTCCCCTCACATTAG------AGTCTCCATCACCTGGGAGATTCCTTCTAATGGCCAAATTACCCCAGGTCACGTCACT------TGGTTTCTCCAACTTTTATCCCTGAGCCTTTAGATCAGCCCTGTTGGAAAGTTAAAAACTTGGCTGATTGCTG---ATGAGTCTGCT--GGAAGGGTGCTCTGCCCGCTACTC--TTCACAACCTTCA--CCCACTTGTCCGGAG--------------------------------------------TCAAGAAAGG-ATCT-GACTCCTCTGGTGCTGCAGTCCTGCGAAGTCT--------Tagagattctcaaagcttaatatacttcag-attacccagggtggcttgttaaaaccaaggttgcagagtccagagtttctgcttccattggtctagggtgggaactcaaaagtgtggatttctagtaagttcccaggtgatgtttaggctgctgat-tgagacctcactggagaaccactgCCCTAGAAAA i canFam3.chr1 C 0 I 136 e mm10.chr7 3641526 2427 + 145441459 I a score=1500.000000 s hg38.chr19_GL949747v2_alt 109862 1 + 729520 G s panTro4.chr19 59043871 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55920842 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54989096 1 + 59248254 G i macFas5.chr19 C 0 M 10062 s chlSab2.chr6 46812047 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45386698 1 + 49145316 G i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e nomLeu3.chr10 102684650 0 - 106955855 C e papAnu2.chr19 47104791 0 + 51301725 C e rheMac3.chr19 59973803 0 + 64156825 C a score=172945.000000 s hg38.chr19_GL949747v2_alt 109863 94 + 729520 AAGACTCTGTAAGCGGCTCTTACgctgggcgcg-----gtggctcacgcctgtaatcccagctacttgggaggctgaggtgggagaatggcttgaacct s panTro4.chr19 59043872 94 + 63644993 AAGACTCTGTAAGTGGCTCTTATgctgggcgtg-----gtggctcacgcctgtaatcccagctacttggtaggctgaggcgggagaatggcttgaaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55920843 94 + 60714840 AAGACTCTGTAAGTGGCTCTTACAccgggcgcg-----gtggctcacgcctgtaatcccagctacttgggaggctgaggcgggagaatcacttgaaccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102684650 98 - 106955855 AAGACTCTGTAAGTGGCTC-TACGCCGGGCGCGTAAGTGTCTCTcacgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaaccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59973803 93 + 64156825 AAGGCTCTGTAAGTGGCTCTCACGCT-GTcgcg-----gtggctcacgcatgtagtcccagctccttggcaggctgaggtaggagaatctcttgaatct i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47104791 93 + 51301725 AAGTCTCTGTAAGTGGCTCTCacgct-ggcgcg-----gtggctcacgcatgtagtcccagctccttgggaggctgaggtaggagaatcacttgaatct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46812048 90 + 50890351 ---TCTCTGTAAGTGGCTCTCACGCT-ggcgcg-----gtggctcatgcacgtagtcccagctccttgggaggctgaggtaggagaatcacttgaatct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45386699 86 + 49145316 -------TATAAGTGGCCCTTAggccaggtgca-----gtggcgcatgcctgtaatcctagctactcaggaggctgagacaggagaatcgcttgaacc- i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e macFas5.chr19 54989097 10062 + 59248254 M a score=80451.000000 s hg38.chr19_GL949747v2_alt 109957 53 + 729520 gggaggcagaggttgcagtgagccgagatggcgcccctgcactccagcctggg s panTro4.chr19 59043966 53 + 63644993 gggaggcagaggttgcagtgagccgagatggccccactgcactccagcatggg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102684748 53 - 106955855 gggaggcagaggttgcagtgagccgagatggcgccattgcactccagcctggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59973896 44 + 64156825 gggag--------tgcagtgagccgagat-gcgccactgctctctagcctggg i rheMac3.chr19 C 0 I 47 s papAnu2.chr19 47104884 53 + 51301725 gggaggtggaggttgcagtgagccgagatggcaccactgctctccagcctggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46812138 53 + 50890351 gggaggcagaggttgcagtgagccgagatggcgccgctgctctccagcctggg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45386785 53 + 49145316 ggaaggcagaggtggcagtgaaccaagattgcgccactgcactccagcctgga i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e macFas5.chr19 54989097 10062 + 59248254 M a score=528.000000 s hg38.chr19_GL949747v2_alt 110010 11 + 729520 t-----gagagagACA s panTro4.chr19 59044019 11 + 63644993 t-----gagagagACA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102684801 15 - 106955855 tg-acagagagagact i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47104937 9 + 51301725 -------agacagaca i papAnu2.chr19 C 0 I 38 s chlSab2.chr6 46812191 9 + 50890351 -------agacaCACA i chlSab2.chr6 C 0 I 20 s calJac3.chr22 45386838 15 + 49145316 -ccacagagtgagact i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e macFas5.chr19 54989097 10062 + 59248254 M e rheMac3.chr19 59973940 47 + 64156825 I a score=9341.000000 s hg38.chr19_GL949747v2_alt 110021 6 + 729520 CTGGCT s panTro4.chr19 59044030 6 + 63644993 CTGGCT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102684816 6 - 106955855 ccgtct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59973987 6 + 64156825 CTGGCT i rheMac3.chr19 I 47 C 0 s papAnu2.chr19 47104984 6 + 51301725 CTGGCT i papAnu2.chr19 I 38 C 0 s chlSab2.chr6 46812220 6 + 50890351 ctggct i chlSab2.chr6 I 20 C 0 s calJac3.chr22 45386853 6 + 49145316 ctgtct i calJac3.chr22 C 0 I 1589 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e macFas5.chr19 54989097 10062 + 59248254 M a score=3000.000000 s hg38.chr19_GL949747v2_alt 110027 2 + 729520 CC s panTro4.chr19 59044036 2 + 63644993 CC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102684822 2 - 106955855 cc i nomLeu3.chr10 C 0 M 1644 s rheMac3.chr19 59973993 2 + 64156825 CC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47104990 2 + 51301725 CC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46812226 2 + 50890351 cc i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e macFas5.chr19 54989097 10062 + 59248254 M a score=48332.000000 s hg38.chr19_GL949747v2_alt 110029 68 + 729520 CACCTCAAGATCGTTTTAGTTGGTCCAGTGTAAGCCTGGGTATCTGGACttttttattttttattttt s panTro4.chr19 59044038 68 + 63644993 CACCTCGAGATTGTTTTAGTTGGTCCAGTGTAAGCCTGGGTATCTGGACttttttattttttattttt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59973995 68 + 64156825 CACCTTGAGATTGTTTTAGTTGGTCTAGTGCAAGCCTGGCTATCTGGACTTCTTTTTTTTTTTTTTTT i rheMac3.chr19 C 0 I 558 s papAnu2.chr19 47104992 64 + 51301725 TACCTCGAGATTGTTTTAGTTGGTCTAGTGCAAGCCTGGCTATCTggacttcactttttttttt---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46812228 65 + 50890351 cacctcgagattgttttagttggtctagtgcaagcctggctatctggacttCAtttttttttttt--- i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e macFas5.chr19 54989097 10062 + 59248254 M a score=121488.000000 s hg38.chr19_GL949747v2_alt 110097 270 + 729520 attttttgagacggcgtcttgctctgtcacccaggctggagtgcaatggcgcaatctcgggtcactgcaacctctgcctcccaggttcaagtgattctcccgcctcagcctcccgagtagctgggattacaggcacatgccaccatgcccagctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctggttttgaactccctacctcaggtgatccgcccacctcggcctctgagagtgctgggattacaggtg s panTro4.chr19 59044106 270 + 63644993 tatttttgagacggcatcttgctctgtcacccaggctggagtgcaatggcgcaatctcgggtcactgcaatctctgcctcccgggttcaagtgattctcccgcctcagccctccgagtagctgggattacaggcgcctgccaccatgcccagctaattttcgtatttttagtagagacagggtttcaccatgttggccaggctggtcttgaactccctacctcaggtgatcctcccacctcggcctctgagagtgctgggattacaggtg i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47105056 270 + 51301725 tttttttgagacgtagtcttgctctgtcacccaggctggggtgcagtggcacgatctcggctcactgcaacctccacctctcgagttcaagcaattcttgtgcctcaggttcccgagtagctgggattataagcgtgcgccatcacgcccggctaatttttgtaattttagtagacatggggtttcaccatgttggccaggctggtctcgaactcctggcctcaggtgatccgcctgcctcggcctcccaaagtgctgggattacaggcg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46812293 266 + 50890351 --ttttgggtacgtagtcttg--ctgtcacccaggctggagtgcagtggcacgatctcggctcacggcaacctccacctctcgagttcaagcgattctcatgcctcaggttcccgagcagctgggattacaagcgtgcgccatcacgcccggctaatttttgtacttttagtagacacggggtttcaccctgttggccaggctggtctcgaactcctggcctcaggtgatccgcccgcctcggcctcccaaagtgctgggattgcaggcg i chlSab2.chr6 C 0 I 70 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e macFas5.chr19 54989097 10062 + 59248254 M e rheMac3.chr19 59974063 558 + 64156825 I a score=340.000000 s hg38.chr19_GL949747v2_alt 110367 3 + 729520 caa s panTro4.chr19 59044376 3 + 63644993 caa i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47105326 3 + 51301725 tga i papAnu2.chr19 C 0 I 73 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e chlSab2.chr6 46812559 70 + 50890351 I e macFas5.chr19 54989097 10062 + 59248254 M e rheMac3.chr19 59974063 558 + 64156825 I a score=9366.000000 s hg38.chr19_GL949747v2_alt 110370 117 + 729520 tggcgcaatctaggctcactgcagcctctgcctcccgggttcaagtgattctcccggcccggcctGGCCTCTAATTTAAAAAAAATTTTTTTTTTTTAAA-GTTCCTCAGGTAggcca s panTro4.chr19 59044379 118 + 63644993 tggcgcaatctaggctcactgcagcctctgcctcccgggttcaagtgattctcctggcccggccCAGCGTCtaattaaaaaaaaaagttttttttttaaaaGTTCCTCAGGTAggccg i panTro4.chr19 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e chlSab2.chr6 46812559 70 + 50890351 I e papAnu2.chr19 47105329 73 + 51301725 I e macFas5.chr19 54989097 10062 + 59248254 M e rheMac3.chr19 59974063 558 + 64156825 I a score=2234.000000 s hg38.chr19_GL949747v2_alt 110487 10 + 729520 ggcgcagtcg s panTro4.chr19 59044497 10 + 63644993 ggcgcagtgg i panTro4.chr19 C 0 I 1 s macFas5.chr19 54999164 10 + 59248254 ggcacagtgg i macFas5.chr19 M 10062 I 1 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e chlSab2.chr6 46812559 70 + 50890351 I e papAnu2.chr19 47105329 73 + 51301725 I e rheMac3.chr19 59974063 558 + 64156825 I a score=37810.000000 s hg38.chr19_GL949747v2_alt 110497 72 + 729520 tcacgcctgtaatcccagcactttgggagactgaggcgagcggatcacctgaggtcaggagttcgacaccag s panTro4.chr19 59044508 72 + 63644993 tcacgcctgtaatcccagcactttgggagactgaggcgggcggatcacctgaggtcaggagttcgagaccag i panTro4.chr19 I 1 C 0 s macFas5.chr19 54999175 72 + 59248254 tcacacctgtaatcccagcactttgggaggccgaggtaggcggatcacctgaggccaggagttcgagaccag i macFas5.chr19 I 1 C 0 s chlSab2.chr6 46812629 72 + 50890351 tcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggccaggagttcgagaccag i chlSab2.chr6 I 70 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e papAnu2.chr19 47105329 73 + 51301725 I e rheMac3.chr19 59974063 558 + 64156825 I a score=21244.000000 s hg38.chr19_GL949747v2_alt 110569 27 + 729520 cctggccaacatggtgaaaccccgtct s panTro4.chr19 59044580 27 + 63644993 cctggccaacatggtgaaaccccgtct i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59974621 27 + 64156825 cctggtcaatatggtgaaacccccact i rheMac3.chr19 I 558 C 0 s macFas5.chr19 54999247 27 + 59248254 cctggtcaatatggtgaaacccccact i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46812701 27 + 50890351 cttggtcaacatggtgaaacccccact i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e papAnu2.chr19 47105329 73 + 51301725 I a score=118453.000000 s hg38.chr19_GL949747v2_alt 110596 93 + 729520 ctactaaaaatacaaaaattagtcgggcgtggtggcgggcgcctgtaatcccagctactcgggaggct-------gaggcgggagaatcacttgaacccc s panTro4.chr19 59044607 92 + 63644993 ctactaaaaatacaaaaattagtcgggcgtggtggcaggcacctgtaatcccagctactcgggaggct-------gaggcgggagaatcacttgaaccc- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102686488 92 - 106955855 ctactaaaaatacaaaaattagtcgggtgtggtggcaggcgcctgtaatcccagctactcgggaggct-------gaggcgggagaatcacttgaaccc- i nomLeu3.chr10 M 1644 C 0 s rheMac3.chr19 59974648 99 + 64156825 ctactaaaaatacaaaaattagtcgggcgtggtggcaggcgcctgtaatcccagctactcgggaggcgggaggctgaggcaggagaataacttgaaccc- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54999274 99 + 59248254 ctactaaaaatacaaaaattagtcgggcgtggtggcaggcgcctgtaatcccagctactcgggaggcgggaggctgaggcaggagaataacttgaaccc- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46812728 92 + 50890351 ctactaaaaatacaaaaattagtcgggcgtggtggcgggcgcctgtaatcccagctactcgggaggca-------gaggcgggagaataacttgaaccc- i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e papAnu2.chr19 47105329 73 + 51301725 I a score=132028.000000 s hg38.chr19_GL949747v2_alt 110689 75 + 729520 gggaggcagaggctgcagtgagcctagattgtgccactgctctccagcctgggggacaagagcaagtcttcgtct s panTro4.chr19 59044699 75 + 63644993 gggaggcagaggctgcagtgagcctagattgtgccactgcactccagcctgggggacaagagcaagacttcgtct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55920937 75 + 60714840 gggaggcagaggctgcagtgagcctagattgtgccacagcactccagcctgcgggacaagagcaagacttcgtct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102686580 75 - 106955855 gggaggcaaaggctgcagtgagcctagattgcaccactgcactccagcctgggggacaagagcgagatatcgtct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59974747 75 + 64156825 gggaggcggagcttgcagtgagcctagattgtgtcattgcactccagcctgggggacaagagcaagacttcgtct i rheMac3.chr19 C 0 I 9 s macFas5.chr19 54999373 75 + 59248254 gggaggcggagcttgcagtgagcctagattgtgtcattgcactccagcctgggggacaagagcaagacttcgtct i macFas5.chr19 C 0 I 9 s chlSab2.chr6 46812820 75 + 50890351 gggaggcagagcttgcagtgagcctagattgtgtcattgcactccagcctgggggacaagagcaagacttcatct i chlSab2.chr6 C 0 I 12 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e calJac3.chr22 45386859 1589 + 49145316 I e papAnu2.chr19 47105329 73 + 51301725 I a score=24414.000000 s hg38.chr19_GL949747v2_alt 110764 21 + 729520 ---caacaacaacaacaataacaa s panTro4.chr19 59044774 12 + 63644993 ---caacaacaacaa--------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55921012 18 + 60714840 ---caacaacaacaa---caacaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102686655 15 - 106955855 ---caacaacaacaa------caa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59974831 21 + 64156825 CACCAACAACAACAA---TAACAa i rheMac3.chr19 I 9 C 0 s macFas5.chr19 54999457 21 + 59248254 CACCAACAACAACAA---TAACAa i macFas5.chr19 I 9 C 0 s papAnu2.chr19 47105402 21 + 51301725 caccaccaacaataa---caacaa i papAnu2.chr19 I 73 C 0 s chlSab2.chr6 46812907 21 + 50890351 caccagtaccaccaa---caacaa i chlSab2.chr6 I 12 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e calJac3.chr22 45386859 1589 + 49145316 I a score=264536.000000 s hg38.chr19_GL949747v2_alt 110785 108 + 729520 caagttcctcaggtgactctg---atgtgcagccaagttgg-aaagtcatcg--CTAGATCCGCGGTGTGCAAAGTG--AACTGCGGACCGTG-----GACTGCGGCACTTGTTAGAAAAG s panTro4.chr19 59044786 112 + 63644993 ---gttcctcaggtgactctg---atgtgcagccaagttgg-aaagtcatcg--CTAGATCCgcggtgtgcaaagtgtgaactgcggaccgtgtccgtcactggggcacttgttagaaaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55921030 114 + 60714840 aaagttcctcaggtgactctg---atgtgcagccaagtttg-aaagtcaTCA--CTAGATccttggtgtgcaaagtgtgaactgtggaccgtgtacgtcactg-ggcacttgttagaaaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102686670 116 - 106955855 aaagttcctcaggtgactctg---atgtgcagccaagtttgaaaaGTCATCA--CTAGATccttggtgtgcaaagtgtgaactgtggaccgtgtacatcactggggcacttgttagaaaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59974852 117 + 64156825 aaagttcctcaggtgactgtg---atgtgcagccaagtttg-aaagtcaTCACTCTGGATCATTGGTGGGcaaagtgtgaactgtggaccatgtgcatcactggggcacttgttagaaaag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54999478 117 + 59248254 aaagttcctcaggtgactgtg---atgtgcagccaagtttg-aaagtcaTCACTCTGGATCATTGGTGGGcaaagtgtgaactgtggaccatgtgcatcactggggcacttgttagaaaag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47105423 117 + 51301725 aaagttcCTCAGGTGACTGTG---ATGTGCAGCCAAGTTTG-AAAGTCATCACTCTGGATCATTGGTGGGCAAAGTGTGAACTGTGGACCCTGTGCATCACTGGGGCACTTGTTAGAAAag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46812928 117 + 50890351 aaagttcctcaggtgactgtg---atatgcagccaagtttg-aaagtcaTCACTCTGGATCATTGGTGGGcaaagtgtgaactgtggaccgtgtgcatcactggggcacttgttagaaaag i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19606658 116 - 122678785 caagccacccagggtattgtagccacgtgcaaccaaatttg-agaaccactgCTCTGTATccttgctactcaaagtgccaactgtggagcatcagcatcacctggcaactcctgaat---- i canFam3.chr1 I 136 C 0 e mm10.chr7 3641526 2427 + 145441459 I e calJac3.chr22 45386859 1589 + 49145316 I a score=302552.000000 s hg38.chr19_GL949747v2_alt 110893 99 + 729520 Cagaatttgcattttaacacattcctaggtgattccggagatgtct--gagaagcgatactttgTCCAGGGGCCACAGTTTGAATAG---CAGAGCTCTAGAAC s panTro4.chr19 59044898 80 + 63644993 cagaatttgcattttaacacattcctaggtgattccggagatgtct--gagaaacaatactttgTCCAGGTGCCACA----------------------AGAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55921144 99 + 60714840 cagaatttGCATTTTAACACATTGCTAGGTGATTCCGGAGATGTCT--GAGAAGCAATACTTTGTCCAGGGGCCACAATTTGAATAG---CAAAGCTCTAGAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102686786 99 - 106955855 cagaatttGCATTTTAACACATTCCTAGGTGATTCCGGAGATGTCT--GAGCAGCAATACTTCGTCCAGGGGCCACAATTTGAATAG---CAAAGCTCTAGAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59974969 99 + 64156825 cagaatttgcattttaacacattcctaggtgattccggaggagtct--gagaagcactACTTTGTGCAGGGGCCACAATTTGAATAG---CAAAGCTCTAGAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54999595 99 + 59248254 cagaatttgcattttaacacattcctaggtgattccggaggagtct--gagaagcactACTTTGTGCAGGGGCCACAATTTGAATAG---CAAAGCTCTAGAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47105540 99 + 51301725 cagaatttgcattttaacacatTTCTAGGTGATTCCGGAGGAGTCT--GAGAAGCAATACTTTGTGCAGGGGCCACAATTTGAATAG---CAAAGCTCTAGAAC i papAnu2.chr19 C 0 I 335 s chlSab2.chr6 46813045 99 + 50890351 cagaatttGCATTTTAACACATTCCTAGGTGATTCCGGAGGAGTCT--GAGAAGCAATACTTTGTGCAGGGGCCACAATTTGAATAG---CAAAGCTCTAGAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45388448 96 + 49145316 caaaatttgcatcttaacaagttccc---tgattccagggaagtct--gagaagcactACTTTGTCCAGGAACCACACTTTGAATAG---CAAAGCTCTAGAAc i calJac3.chr22 I 1589 C 0 s canFam3.chr1 19606774 103 - 122678785 cagaatatgcattttaacaaatctccagttggttcCC-AGATGTCTGAGAGAGGCATTGCTCCATCCAGGGACCACACGTTGAAGAGTGTTGTGGCTCTAGATC i canFam3.chr1 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I a score=84130.000000 s hg38.chr19_GL949747v2_alt 110992 37 + 729520 AATAACT--------------------------------------------------------CTAGGCTTCATTCCCGTTGTCTGTGTGTGG s panTro4.chr19 59044978 37 + 63644993 AATAACT--------------------------------------------------------GTAGGCTTCATTCCCGTTGTCTGTGTGTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55921243 37 + 60714840 AATAACT--------------------------------------------------------CCAGGCTTCATTCCCGTTGTCTGTGTGTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102686885 37 - 106955855 AGTAACT--------------------------------------------------------CTAGGCTTCATTCCCGTCGTCTGTGTGTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59975068 37 + 64156825 AATAACT--------------------------------------------------------CTAGGCTTCATTCCCGTTGTCTGCATGTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54999694 37 + 59248254 AATAACT--------------------------------------------------------CTAGGCTTCATTCCCGTTGTCTGCATGTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47105974 37 + 51301725 aataact--------------------------------------------------------ctagGCTTCATTCCCGTTGTCTGCATGTGA i papAnu2.chr19 I 335 C 0 s chlSab2.chr6 46813144 37 + 50890351 AATAACT--------------------------------------------------------CTAGGCTTCATTCCCGTTGTCTGCATGTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45388544 91 + 49145316 agtaactcccaaacggtaatgcacacggggatcacc--gggaagtctgtgaagatgcagatccccaggcttcattcccgttgtctgtgtgtgg i calJac3.chr22 C 0 C 0 s canFam3.chr1 19606877 91 - 122678785 AATGGCCATCCAACTccagtgagcatggggatcacccagggaagtgtgtaaaagtgcagacgtctaggcttcgctatctccatcggtgtag-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I a score=6001717.000000 s hg38.chr19_GL949747v2_alt 111029 1648 + 729520 GCCTACGAATA-TGCATTTTCGCAAGCATTCCTCCTCCCCCTTGCCTCAGACCATTCTGATGCGGGTGGTGCTGAACGGCTCCATCCTCCTTCACGTTCACCTCTCCCTGGGATTTATCTTACTTTCCACCACCTAGACAGGAAGGGGCGAATCTGGCTTCCCATCTCGGTTGTGTG----ACCCTGGGCAAATGCCTCCCAGTTCGTGGAAGTCTCAGTGTCTAGTAAGTTTTCAATCACAAGTCATTCCTC--------------ACATTCATTCatctattcctttgacaaatggttactgactacttcctgcgtgctaagtgctggagatgcaaaATCCAGACAGGGAAAC-CGAATAATTACGAAAATGACGGTAGACGTACAAAAATAAATCCTAACGAACAAggcgcgcaggagcgctccgcccgggagggaggtcagggaagttttctctccaagaagacaacagagctgagacctgaaacgagcaggcattagggagccaccc------------------gtCTCCTCTGTACCTTCTGCAGCGTCCTCAACACACTAAGGAAGCGGAGACGCAGAGGAGAATGACTGTCCTACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCATGCCTCAC-GCTTCCCAACCAATTCTGCTATGCACGG---TGCCAGAGACTTA-AAGCAGTGTCTCTGGTCCCTTTCTTCTTTCACTC-------AGCAAATAATGAATTTCAGAGATGTGCCAACATAGAGGCACTTGGAGAAAGACGAGGCAGCTGAG----AGGGAAGCTGCTTACCTGGCCGGGACGCAACGGTTGCGACCAAGTCCCACTTCTGCCAGCTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAATGATAACTTTTAGGGCC-AACGAAGAAAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCACTTGGCCCTGTGGCTGTTTTGATTGGCAGATGACTTCGGCT--CGGCCCCCGCTTTAAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCCCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATGACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCGTAGCTCCTCCCCCAGACCAATTGTTTTAAGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GggaggaggaggaggagcggggaggaAA-ACCTGAGCCAATCCTAGCAGCCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCGATCACCCAATCCGCGAAAGGGGGCAGGGCGCATCCCTGCCAGGAACCAATAGAAAGCCTCCAAGGGTCAGGAGCGACGTTCAGCAGGAGCAATGACTGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGCCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGAGCCCCGACCCCC-------GTCGTC-AGAACAA s panTro4.chr19 59045015 1648 + 63644993 GCCTACGAATA-TGCATTTTCGCAAGCATTCCTCCTCCCCCTCGCCTCAGACCATTCTGATGCGGGTGGTGCTGAACGGCTCCATCGTTTTTCACGTTCACCTCTCCCTGGGATTTATCTTACTTTCCACCACCTAGACAGGAAGGGGCGAATCTGGCTTCCCATCTCGGTTGTGTGTGTGACCCTGGGCAAATGCCTCCCAGTTCGTGGAAGCCTCAGTGTCTAGTAAGTTTTCAATCACAAGTCATTCCTC--------------ACATTCATCCatctattcctttgacaaatggttact----acttcctgcgtgctaagtgctggagatgcaaaATCCAGACAGGGAAAC-CGAATAATTACGAAAATGACGGTAGACGTACAAAAATAAATCCTAACGAACAAggcgcgcaggagcgctccgcccgggagggaggtcacggaagttttctctccaagaagacaacagagctgagacctgaaacgagcaggcgttagGGAGCCACCC------------------GTCTCCTCTGTACCTTCTGCAGCGTCCTCAACACACTAAGGAAGCGGAGATGCAGAGGAGAATGACTGTCCCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCATGCCTCAC-GCTTCCCAACCAATTCTGCTATGCACGG---TGCCAGAGACTTA-AAGCAGTGTCTCTGGTCCCTTTCTTCTTTCACTC-------AGCAAATAATGAATTTCAGACATGTGCCAACATAGAGGCACTTGGAGAAAGACGAGGCAGCTGAG----AGGGAAGCTGCTTACCTGGCCGGGACGCAAGGGTTGCGACCAAGTCCCACTTCTGCCAGCTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAACGATAACTGTTAGGGCC-AACGAAGAAAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCACTTGGCCCTGTGGCTGTTTTGATTGGCAGATGACTTCGGCT--CGGCCCCCGCTTTAAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCCCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATGACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCATAGCTCCTCCCCCAGACCAATTGTTTTAAGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GGGAGGAGGAGGAGGAGCGGGGAGGAAA-ACCTGAGCCAATCCTAGCAGGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCGATCACCCAATCCACGAAAGGGGGCAGGGCGCATCCCTGCCAGGAACCAATAGAAAGCCTCCAAGGGTCAGGAGCGACGTTCAGCGGGAGCAATGACTGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGCCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGAGCCCCGACCCCC-------GTCGTC-AGAACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55921280 1642 + 60714840 GCCTACGAATA-TGCATTTTTGCAAGCATTCCTCCTCCCCCTTGCCTCAGACCATTCTGATGCGGGTGGTGCTGAACGGCTCCATACTTGTTCACGTTCACCTCTCCCTGGGATTTATCTGACTTTCCACCACCTAGACAGGAAGGGGCGGATCTGGCTTCCCATCTCGGTTGTGTG----ACCCTGGGCAAATGCCTCCCAGTTCGTGGAAGCCTCAGTGTCTAGTAAGTTTTGAATCTCAAGTCATTCCTC--------------ACATTCATTCatctattcctttgacaaatggttactgactacttcctgcgtgctaagtgctggagatgcaaaATCCAGAC--GGAAAC-CGAATAATTACGAAAATGACGGTAGACGTACAAAAATAAATCCTAACGAACAAagcgcgcaggagcgctccgcct----gggaggtcagggaagttttctctccaggaagacaacagagctgagacctgaaaccagcaggcattagGGAGCCACCC------------------GTCTCCTCTGTACCTTCTGCAGCGTCCTCAACACACTAAGGAAGCGGAGATGCA---GAGAATGACTGTCCCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCACGCTTCAC-GCTTCCCAACCAATTCTGCCATGCACGG---TGCCAGTGACTTA-AAGCAGTGTCTCTGGTCCCTTTCTTCTTTCACTC-------AGCAAATAATGAATTTCAGAGATGTGCCAACATAGAGGCACTTGGAGAAAGACGAGGCAGCTGAGAGACAGGGAAGCAGCTTACCTGGCCGGGACGCAAGGGTTGCGACCAAGTCCCACTTCTGCCAGCTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAATGATAACTGTTAGGACCAAACGAAGAGAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCACTTGGCCCAGTGGCTGTTTTGATTGGCAGATGACTTCGGCT--CGGCCCCCGCTTTAAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCCCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATGACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCGTAGCTCCTCCCCCAGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GGGAGGAGGAGGAGGAGCGGGGAGGAAA-ACCTGAGCCAATCCTAGCAGGCTGCGCGGGAGGCC-ATCGAACGCCGCG-CTTGGAGCTACCACCCAATCCGCGAAAGGGGGCAGGGCGCATCCCTTCCAGAAACCAATAGAACGCCTCCAAGGATCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGTCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGAGCCCCGACCCCC-------GTCGTC-AGAACAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102686922 1648 - 106955855 GCCTACGAATA-TGCATTTTAGCAAGCATTCCTCTTCCCCCTTGCCTCAGACCATTCTGATGC-GGTGGTGCTGAAGGGCTCCATACTTGTTCACGTTCACCTCTCCCTGGGGTTTATCTTATTTTCCACTACCTAGACAGGAAGGGGCGGATCTGGCTTCCCATCTCGGTTGTGTG----ACCCTGGGCAAATGCCTCCCAGTTCGTGGAAGCCTCAGTGTCTAATAAGTTTTCAATCACAAGTCATTCCTC--------------ACATTCATTCatctattcctttgacagatggttactgactacttcctgcgtgctaagtgctggaaatgcaaaATCCAGACAGGGAAAC-CGAGTAATTACGAAAATGACGGTAGACGTACAAAAATAAATCCTAACGAACAAggctcgcaggagcgctccgccc----gggaggtcagggaagttttctctccaagaagacgacagagctgagacctgaaacgagcaggcattagGGAGCCACCT------------------GTCTCCTCTGTACCTTCTGCAGCGTCCTCAACACACTAAGGAAGAGGAGATGCAGAGGAGAATGACTGTGTCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCTATGCCTCAC-GCTTCCCAACCAATTCTGCTATGCACGG---TGCCAGTGACTTA-CAGCAGTGTCTCTGGTCCCTTCCTTCTTTCACTC-------AGCAAATAATGAATTTCAGAGATGTGCCAACATAGAGGCACTTGGAGAAAGACGAGGCAGCTGAGAGACAGGGAAGCAGCTTACCTGGCCGGGACGCAAGGGTCGCGCCCAAGTCCCACTTCTGCCAGCTACATACACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCAAGCTATTGGTCAAACCAGCAGGAATGATAACTGTTAGGGCC-AACGAAGAGAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCACTTGGCCCAGTGGCTGTTTTGATTGGCAGATGATTTCGGCT--CGGCCCCCGCTTTGAAGGCACCTGTCTGTCTCCCATTAGGTACGCGTCCCCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATGACTTCCAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCCTAGCTCCTCCCCCCGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCAGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-Gggaggaggaggaggagcgggga-gAAA-ACCTGGGCCAATCCTAGCAGGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCGATCACCCAATCCGCGAAAGGGGGCAGGGCGCATCCCTGCCAGGAACCAATAGAACGCCTCCAAGGGTCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGCTTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGAGCCCCGACCCCC-------GTCGTC-AGAACAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59975105 1641 + 64156825 GCCTAAGAATA-TGGATTTTTGCAAGCGTTCCTCC-CTCTCTTGCCTCAGGCCATTCTGAT-------GTGCTGACCGACTCCGTACTTGTTCACGTTCACTTCTCTCTGGGATTTATCTTACTTTCCACCACCTAGACAGGAAGGGGAGGATCTGGCTTCCCATCTCGGTTGTGTG----ACCCTGGGCAAATGCCTCCGGGTTCGTGGAAGCCTCAGTGTCTAGTAAGTTTTCAATCACAAGTCATTCCTC--------------ACATTCATTCatctattcctttgacaaatggttaccgactacttcctgcgtgctaagtgctggagatgcaaaatccagacagggaaac-cgaataattacgaaaatgacgatagacgtgcaaaaataaattctaacgaacaaggcgcacaggagcgctccgccc----gggaggtcagggaagttttctccccaagaagatgacagagctgagacctgaaacgagcaggaattagggagccaccc------------------gtCTCCTCTGTACCTTCGGCGGCGTCCTCAACACGCTAAGGAAGCGGAGATGCAGAGGAGAATGACTCTCCCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCACGCCTCAC-GTTTCCCAACCAATTCTGCTATGCACGG---TGCTAGTGACTTA-AAGCACTGTCTCTGGTCCCTTCCTTCTTTCACTC-------AGCAAAT----AATTTCAGAGATGTGCCAACACGGAGGCACTTGGGGAAAGAAGAGGCAGCTGAGAGACAGGGAAGGAGCCTACCTGGCCAGGACGCAAGGGTTGCACCCAAGTTCCACTTCTGCCAGTTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAATGATAACCGTTAGGGCC-AACGAAGAGAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCCCTTGGCCCAGTGGCTGTTTTGATTGGCAGATGACTTCGGCT--CGGCCCCCGCTTTGAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCTCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATTACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCCTAGCTCCTCCCCGCGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GGGAGGAGGAGGAGGAGCGGGGAGGAAA-ACCTGAGCCAATCCTAGCAGGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCAATCACCCAATCCGCGAAAGGGGGCAGGGCACATCCCTGCCAGGAACCAATAGAACGCCTCCAAGGGTCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCAGAGACGAGACGAGAAGAGAGGAGGCCAGGCCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGATCCCCGACCCCC-------GTCGTC-AGAACAA i rheMac3.chr19 C 0 M 434 s macFas5.chr19 54999731 1636 + 59248254 GCCTAAGAATA-TGGATTTTTGCAAGCGTTCCTCC-CTCTCTTGCCTCAGGCCATTCTGAT-------GTGCTGACCGACTCCGTACTTGTTCACGTTCACTTCTCTCTGGGATTTATCTTACTTTCCACCACCTAGACAGGAAGGGGCGGATCTGGCTTCCCATCTCGGTTGTGTG----ACCCTGGGCAAATGCCTCCGGGTTCGTGGAAGCCTCAGTGTCTAGTAAGTTTTCAATCACAAGTCATTCCTC--------------ACATTCATTCATCTATTCCTTTGACAAATGGttactgactacttcctgcgtgctaagtgctggagatgcaaaatccagacagggaaac-cgaataattacgaaaatgacggtagacgtgcaaaaataaattctaacgaacaaggcgcacaggagcgctccgccc----gggaggtcagggaagttttctccccaagaagatgagagagctgagacctgaaacgagcaggaattagGGAGCCACCC------------------GTCTCCTCTGTACCTTCGGCGGCGTCCTCAACACGCTAAGGAAGCGGAGATGCAGAGGAGAATGACTCTCCCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCACGCCTCAC-GTTTCCCAACCAATTCTGCTATGCACGG---TGCTAGTGACTTA-AAGCACTGTCTCTGGTCCCTTCCTTCTTTCACTC-------AGCAAAT----AATTTCAGAGATGTGCCAACACGGAGGCACTTGGGGAAAGAAGAGGCAGCTGAGAGACAGGGAAGGAGCCTACCTGGCCAGGACGCAAGGGTTGCGCCCAAGTTCCACTTCTGCCAGTTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAATGATAACCGTTAGGGCC-AACGAAGAGAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCCCTTGGCCCAGTGGCTGTTTTGATTGGCAGATGAGTTCGGCT--CGGCCCCCGCTTTGAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCTCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATTACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCCTAGCTCCTCCCCGCGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GggaggaggaggaggagcggggaggaAA-ACCTGAGCCAATCCTAGCAGGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCAATCACCCAATCCGCGAAAGGGGGCAGGGCACATCCCTGCCAGGAACCAATAGAACGCCTCCAAGGGTCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGCCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGATCCCCGAGCCCC-------GTCGTC-AGAACAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47106011 1633 + 51301725 GCCTAAGAATA-TGCATTTTTGCAAGCGTTCCTCC-CCCTCTTGCCTCAGGCCATTCTGAT-------GTGCTGACCGACTCCGTACTTACTCACCTTCACTTCTCTCTGGGATTTATCTTACTTTCCACCACCTAGACAGGAAGGGGCGGATCTGGCTTCCCATCTCGGTTGCGTG----ACCCTGGGCAAATGCCTCCCGGTTCGTGGAAGCCTCAGTGTCTAGTAAGTTTTCAATCACAAGTCATTCCTc--------------acattcattcatctgttcctTTGACAAATGGTTACTGACTACTTCCTGCGTGCTAAGTGCTGGAGATGCAAAATCCACATAGGGAAAC-CGAATAATTACGAAAATGACGGTAGACgtgcaaaaataaattctaacGAACAAGGCGCACAGGAGCGCTCCGCCC----GGGAGGTCAGGGAAGCTTTCTCCCCAAGAAGACAACAGAGCTGAGACCTGAAACGAGCAGGCATTAGGGAGCCACCC------------------GTCTCCTCTGTACCTTCTGCGGCGTCCTCAACACACTAAGGAAGCGGAGATGCAGAGGAGAATGACTCTCCCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCACGCCTCAC-GCTTCCCAACCAGTTCTGCTATGCACGG---TGCCAGTGACTTA-AAGCACTGTCTCTGGtcccttccttctttcactc-------agcaaat----aATTTCAGAGATGTGCCAACACAGAGGCACTTGGAGA---AAGAGGCAGCTGAGAGACAGGGAAGCAGCCTACCTGGCCGGGACGCAAGGGTTGCGCCCAAGTCCCACTTCTGCTAGTTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAATGATAACCGTTAGGGCC-AACGAAGAGAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCCCTTGGCCCAGTGGCTGTTTTGATTGGCAGATGACTTCGGCT--CGGCCCCCGCTTTGAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCTCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATTACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCCTAGCTCCTCCCCGCGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTgaggc-gggaggaggaggaggagcggggaggaAA-ACCTGAGCCAATCCTAGCAGGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCAATCACCCAATCCGCGAAAGGGGGCAGGGCACATCCCTGCCAGGAACCAATAGAACGCCTCCAAGGGTCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGAcgagaagagaggaggggaggcctCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGAGccccgaccccc-------gtcgtc-agaacaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46813181 1637 + 50890351 GCCTAAGAATA-TGCATTTTTGCAAGCGTTCCTCC-CCCTCTTGCCTCAGGCCATTCTGAT-------GTGCTGACCGACCCCGTACTTGTTCACGTTCACTTCTCTCTGGGATTTATCTTACTTTCCACCACCTAGACAGGAAGGGGCGGATCTGGCTTCCCATCTCGGTTGTGTG----ACCCTGGGCAAATGCCTCCGGGTTCGTGGAAGCCTCAGTGTCTAGTAGGTTTTCAATCACAAGTCATCCCTC--------------ACATTCATTCatctattcctttgacaaatggttactgactacttcctgcgtactaagtgctggagatgcaaaATCCACATAGGGAAAC-CGAATAATTACGAAAATGACGGTAGACGTGCAAAAATAAATTCTAACGAACAAGGCGCACAGAAGCGctccgccc----gggaggtcagggaagttttctccccaagaagacaacagagctgagacctgaaacgagcaggcattagGGAGCCACCC------------------GTCTCCTCTGTACCTTCTGCGGCGTCCTCAACACACTAAGGAAGCGGAGATGCAGAGGAGAATGACTCTCCCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCACGCCTCACGGTTTCCCAACCAATTCTGCTATGCACGG---TGCTAGTGACTTA-AAGCACTGCCTCTGGTCCCTTCCTTCTTTCACTC-------AGCAAAT----AATTTCAGAGATGTGCCAACACAGAGGCACTTGGAGAAAGAAGAGGCAGCTGAGAGACAGGAAAGCAGTCTACCTGGCCAGGACGCAAGGGTTGCGCCCAAGTCCCACTTCTGCCAGTTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAATGATAACCGTTAGGGCC-AACGAAGAGAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCCCTTGGCCCAGTGGCTGTTTTGATTGGCAGATGACTTCGGCT--CGGCCCCCGCTTTGAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCTCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATTACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCCTAGCTCCTCCCCGCGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GggaggaggaggaggagcggggaggaAA-ACCCGAGCCAATCCTAGCAGGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCAATCACCCAATCCGCGAAAGGGGGCAGGGCACATCCCTGCCAGGAACCAATAGAACGCCTCCAAGGGTCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGTCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGAGCCCCGACCCCC-------GTCGTC-AGAACAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45388635 1638 + 49145316 gcctaagaaaa-tgcatttttgcaagCACGCCTCC-CTCTCTTGCCTCAAGCCATTCTGATGCGGGTAGTGCTGAACGGCTCCACACTAGTTCACGTTCACTTCTGCCCTGGATTTCTCTTACCTCCCACCACCTAGAGAGGAAGGGGCGGATCTGGCTTCCCATCTCGACTGTGTG----ACCCTGGGCAAATGCCTCCCAGTTCGTGCAAGCCTCAGTGTCTAGAACGTTTTCAATCACAAGTCATTCCTC--------------ACATTCATTCatctattcctttggcaagtggttactggctacttcctgagtgcgaaatgctggagatacaaaATCCAGACAGTGAAAC-CGAATAATTACGAAAATGACGGTAGACGTGCAAAAATAAATCCTAAccagcaaggcgcacatgagcgctcaacac----gggaggtcagagaagttttctccctaagaagacaacggagctgagacctgaaacgaggaggcattagGGAGCCACCC------------------GACTCCGCTGTACCTTCTGCACCGTCCTCAACacagtaaggaaactgaggagca---gagaatgactgtcc--ccatctggtcacgtaacgaggcagaggcaggacaaaaactccatacctcgc-gcttcccaAGCAACTCTACTATGCACAA---TGCCAGTGGCTTAGAAGCACTATGTCTGGTCCCTTCCTTCTTTCACTC-------AGCAGATAATGAATTTCAGAGATGTGCCAACACAGAGGCACTTGGAGAAAGACGGGGCAACTGAGAGAGAGGG-AGCAGCCCTCCTGGCCGGGACGCAAGGGATGCGCCCAAGTCCCACGTCTGCCGACT------ACACCCTCTTTCACACGCTCTATGAGCAGCCACCGCCCACTCGCCACACTATTGGCCAAACTGGCCTGAATGATAACCCTCGGGGCC-AACGAAGATAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCCCTTGGCCCAGTGGCTGTTTTGATTGGCAGATAACTTCGGCT--CGGCCCCCGCTTTGAAGGCACCTGTCTGTCTCCCAGTAGGTACACGGCCCCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATGACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACCGTCCTAGCTCCTCCCCCGGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGCTCGGGTCCTCGCGCTGGCGTGTTGTGCCCCGAGGC-GGGAGGAGGAGGAGGAGCCGGCAGGAAA-ACCTGAGCCAATCCTAGCAAGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGTGATTACCCAATCCGCGAAAGGGGGCAGGGCACATCCCTACCAGGAACCAATAGAACGCCCCCAAAGGTCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTTGGGGCTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGCCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCGTCCCTTGAGCCCCGACCCCC-------GTCGTC-AGAACAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3643953 1433 + 145441459 gccGAAGAATA-TGCCTTTTTATAAGCCATTTTTT-CTCTCTTGCTTCATGCCATTCTGAT-------GCGGTGAA-------ATGCACGTGCACGTTCTCTTCAAGTGTGGATTTATCTTCTTTTCCTCCACATAG-TAGGCAGAGATAGATCGAGTTTC-------------------------------------CCCAATTCATGAAAAC----GTGGTGCTCACGTTTGCAACCT--AGTCA-------------------------------------------GCAAAGGGCTATGGAGTGCTTCATGGGTACTAAAC------AACGAGAAATCCAGAGAGTGAGACTCAAGTATGTGTAAAAACGGCAGGAATCAAACAAAATTAAACC--------AGAGGCTCACCTAAGCACTCGGCAA----GGGTGGTCGGAGAAGTTTACTCCTTAAGAAG----CATAGC--AGAACTCTAGTGAGTAGTCATTACAGATGTAACCGAGGTAGGGCAAAGCGCAGTTTCCTCTACAGCT-----GGAGTCCTTGCAACTCCAGGGAAG-----------------------GTCCCA--GTCTGCTAACTTAACCAGAGA-------AACGTCAGTCCCACGCCTTGT-GTTTCTCAGTCGCTTCTGC--------------------------AA----TGTTCCTGATTCCTTCTTTCTTTCTTTCATCCTTTAGAAAGCACTGAGTTTTAGAGATATACCAA-GCAAACGCGCTTGGGGAATAACTACGAGGATCAGAT-------AACAGCCTA---GACAGGCAAAGGAAGGATGC--------------TCCGACAACCACAC---------------------CTGTCGGCAGGT------TAATAGCTACCCTATTGGCTAA--------------------------CC-GAGGGAAGGGGCGGGGTG------TTTGTCTAGCTCCTCCCCTTAGGGCTGGCGGCTCTTTTGATTGGTAGATGACTTGGGTTTACTATCCCCAACCCTCTGGCACCTCTCCGTCTCCCACTAGATAAGCTTCCTTTAACACTCACACGCTATGCTTTTTGTCGTTTTCCTCTACCCACATTCATAGCTAACCAATGAGTTCAGGGTAGAATACA-CCTCGCAACCAATTACAGCTGCCTTTAAACTTGACGAGTAACTTCCCGCCCCT----CACCCTGACTCCTCCCCGCTGCCAATTGATTTAGGGTAAGGGGGCGGACACATCCAATCAGCACGACACAGGCTTCCTGATTGACACCCAGGTCCTCGCGCTGGCGTGTTGTGCTCCGAGGAGGGGAGGAGGAGGAGGAGCTGGGAAGAAATACCCGAGCCAATCCAAGCAAGCTGAGCGGGAGGCCAATCGAACGCCGCGCCTTGCCGAGATCAGCCAATCATAATGAAGAGGTTGGCCTCATTCTCGCTAGGAACCAATGGGGCGCGCCTAACGGCGCAGAGCGACGTACTGCGGGAGCAATGACGGACCTATATTCGGGGCTCGGGGGCGGGCCGGCGCCA-----GAGAGGAGAAGAGAGGAGGGGAGG---CCTCCGCCGCCGCCATCTTGGACCGGGCCCGTTCAGCTTCCGTGGAGCCGTCGGCAGCCGCTGCCGGGCCTTTCCTTGATCCCTGAATCCCCTACTCGGTCGTCTAGAACAA i mm10.chr7 I 2427 C 0 s canFam3.chr1 19606968 1304 - 122678785 acctgggaacactgcgttttcacaaac---ccttc-ccctactttgccaggcgattccgat--------------gcaGCCC---------TCACTTGCAC--CCTCCTTGGATTTGTCCT--TCCCCAC---------------------------CTTCCCATCTAGACCGTCTG----ACCCTGGGCAAATGCCTCAGGGTTCGTGAAAGCACCAGTGCCTCCCGAGTCGTCGACCACAAGTCTTCCCTCGCATGCATGCACATGCATTCATTCATTCCTTCCCTGAGCCAACAGTTACTG---TGTTCCTGCG--------------GATGCCAGCTCCAGG-AGGGCAGC-C----------------------------------------------------GGGGCGCCGGAGGGCACAGGGC----G----------------------------------------------------------------------------------------------ATCTCCTGCGTATCCTCTGCATTGTCCTCACGACGCGGAGGAAGCGGACGTGCAG------------------------------------AGGCAG----------------------CTCCT-GTTCCCCCGCC------GCGGAGCGCGGATCTGCCGGT-------GACCACTGCCTC----------CCTCCTCCGATC-------TACAACC-CTGAGTCCGAAACATG---------AGAATCCC---------AAACAGGCAGCG-------AGAGGAGCA--CTACGCGCCCGGGAGCCAAG--------------------CCCGCCTGCT------ACGCCCGGTTTCACACGCCGCGAAGGCCGGTGCCGCCCCCTCGCTGCGCCCCTGGACTGGCCGCGGTGAGCGACAGCTGTCCTGGCC-AACGAGCGGAGAGGGGCGGGCCCGCCGGCCCAGCTCCGCCC-CGTGGCCCAGC-GCAGCTTTAATTGGCAGGCGACTTCGGCA----------------------CCTGTCCTCCTCCCATTAGGTGTAAGGCCTTTCACGCCCACGCTCCACGCCTGCCTCCGCTTTCC-CCACCCACTTCCGGAGCCAACCAATGGCCTCGGGGCAGAAGATCCCCTCACAACCAATTACAAACGGCCCTAAACTCGACGCCCGACTTCCCGCCCCT-GATCAGCCTGGCTCCTCCCCGCGGCCAATTGGTTTAGGAGAGGGGGGCGGGTGTATCCAATCAGCACGACAGTGGCGTCTTGATGGACGCGCGGGCCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GG--GGAGGAGGAGGAGCGGGGAGGAAA-ACCTGAGCCAATCCTAGTAGCCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGGGATTGCCCAATCGGCGAGAGGGGGCCGGCTGCGTCCTGGCCAAAGACCAATAGGGTGCGACCGAAGGGCAAGAGCGACGTGCCGCCGGAGCAATCACAGGCCTGTGCACGGGGCTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGCCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCCTGAGCCCCGA-CCCC-------GTCGTC-AGAACAA i canFam3.chr1 C 0 C 0 a score=136755.000000 s hg38.chr19_GL949747v2_alt 112677 38 + 729520 CCCC-GGGCCCACT--CC------------CCCAACCCCAC-TTCCG--CTTCGCG s panTro4.chr19 59046663 38 + 63644993 CCCC-GGGCCCACT--CC------------CCCAACCCCAC-TTCCG--CTTCGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55922922 38 + 60714840 CCCC-GGGCCCACT--CC------------CCTAACCCCAC-TTCCG--CTTCGCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102688570 40 - 106955855 CCCCGGGGCCCACT--CC------------CCCAACCCCACTTTCCG--CTTCGCG i nomLeu3.chr10 C 0 M 635 s macFas5.chr19 55001367 38 + 59248254 CCCC-GGGCCCACT--CC------------CCCAACCCCAC-TTCCG--CTTCGCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47107644 38 + 51301725 cccc-gggcccact--cc------------cccaaccccac-ttCCG--CTTCGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46814818 38 + 50890351 CCCC-GGGCCCACT--CC------------CCCAACCCCAC-TTCCG--CTTCGCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45390273 38 + 49145316 CCCC-GGGCCCACT--CC------------CCCAACCCCAC-TTCCG--CTTCGCG i calJac3.chr22 C 0 C 0 s mm10.chr7 3645386 52 + 145441459 TCCC-GGGCCCACT--TCCTCTATCAACAACCCAACCCTAC-TTCCGGCTTTCGCG i mm10.chr7 C 0 I 2 s canFam3.chr1 19608272 40 - 122678785 CCCC-GGGCCCACTTCCC------------CCCCACCCCAC-TTCCG--CTTCGCG i canFam3.chr1 C 0 C 0 e rheMac3.chr19 59976746 434 + 64156825 M a score=1206097.000000 s hg38.chr19_GL949747v2_alt 112715 490 + 729520 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCTTCCTCCC-CCCGGCGCCATCGGCCGCCCTCCCCGCCGCCTCCCGCCCTGGCGACACCGCCGTCTGTCGCGACATGGCCTC--CCCT---CGCCTGCCCCCTGCCGCCGCCTCTG---CAGCGCGGGGCTCCCGGCGGGGGGCGGCTCCCTCCCTCTCGCCCTCCCGTTCCTGCGCCTCTTTCACGTTCCTCAGCGCCTCCCGGGGGTCCTTCCGCGACCCGGACCCCGGGCCCCGCCCGCCGCCGCCTCCCCGCGTGGCATCGCGTCGG-GCCCCCCGGTAGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG s panTro4.chr19 59046701 490 + 63644993 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCTTCCTCCC-CCCGGCGCCATCGGCCGCCCTCCCCGCCGCCTCCCGCCCTGGCGACACCGCCGTCTGTCGCGACATGGCCTC--CCCT---CGCCTGCCTCCTGCCGCCGCCTCTG---CAGCGCGGGGCTCCCGGCGGGGGGCGGCTCCCTCCCTCTCGCCCTCCCGTTCCTGCGCCTCTTTCACGTTCCTCAGCGCCTCCCGGGGGTCCTTCCGCGACCCGGAccccgggccccgcccgccgccgcctccccgcgTGGCATCGCGTCGG-GCCCCCCGGTAGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55922960 490 + 60714840 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCCTCCTCCC-CCCGGCGCCATCGGCCGCCCTCCCCGCCGCCTCCCGCCCTGGCGACACCGCCGTCTGTCGCGACATGGCCTC--CCCT---CGCCTGCCCCCTGCCGCCGCCTCTG---CAGCGCGGGGCTCCCGGCGGGGGGCGGCTCCCTCCCTCTCGCCCTCCCGTTCCTGCGCCTCTTTCACGCCCCTCAGCGCCTCCCGGGGGTCCTTCCGCGACCCGGAccccgggccccgcccgccgccgcctccccgcgTGGCATCGCGTCGG-GCCCCCCGGTAGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55001405 490 + 59248254 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCCTCCTCCC-CCCGGCGCCATCGGCCGCCCTTCCCGCAGCCTCCCGCCCTGGCGACACCGCCGTCTGTCGCGACATGGCCTC--CCCT---CGCCTGCCCCCTGCCGCCGCCTCTG---CAGCGCGGGGCTCCCGGCGGGGGGCGGctccctccctctcgccctcccgttcctccGCCTTTTTCACGCCCCTCAGCGCCGCCCGGGGGTCCTTCCGCGACCCGGACCCCGGGCCCCGCCCGCCGCCACCTCCCCGCGTGGCATCGCGTCGG-GCCCCCCGGTAGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47107682 490 + 51301725 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGgaccccttcccctcctccc-cccggcgccatcggccgcccttcccgcagcctcccgccctGGCGACACCGCCGTCTGTCGCGACATGGCCTC--CCCT---CGCCTGCCCCCTGCCGCCGCCTCTG---CAGCGCGGGGCTCCCGGCGGGGGGCGGCTCCCTCCCTCTCGCCCTCCCGTTCCTCCGCCTCTTTCAcgcccctcagcgccgcccgggggtccttccgcgacccggaccccgggccccgcccgccgccacctccccgcgtggcatcgcgtcgg-gccccccggTAGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46814856 490 + 50890351 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCCTCCTCCC-CCCGGCGCCATCGGCCGCCCTTCCCGCAGCCTCCCGCCCTGGCGACACCGCCGTCTGTCGCGACATGGCCTC--CCCT---CGCCTGCCCCCTGCCGCCGCCTCTG---CAGCGCCGGGCTCCCGGCGGGGGGCGGctccctccctctcgccctcccgttcctccGCCTCTTTCACGCCCCTCAGCGCCGCCCGGGGGTCCTTCCGCGACCCGGACCCCGGGCCCCGCCCGCCGCCACCTCCCCGCGTGGCATCGCGTCGG-GCCCCCCGGTAGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45390311 491 + 49145316 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCCTCCTCCCTCCCGGCACCATCGGCCACCCTCCTTGCCGCCTCCCGCCCTGGCGACACCGCCGTCTGTCGCGACATGGTCTC--TCCT---CGCCCGCCCCCTGCCGCCGCCTCTG---CAGCGCGGGGTTCCCCGCGGGGGGCGGctccctccctctcgccctcccgctcctccgcctccttcacgcccctcaccgccgcccGGGGGTCTTTCCGCGACCCGGAccccgggccccgcccgccgccgcctccccgcgTGGCATCGCGTCGG-GCCCCCCGGTGGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG i calJac3.chr22 C 0 C 0 s mm10.chr7 3645440 406 + 145441459 CTCTTATCGCGATAGCGCCCGGGCTCGGGGCGCGAGGAAAGAGGAAAAAAAAAAAAAAAAAAGGCGGCGGGCGGGCGCTCGCCTCTCTCTCCCCCCTCCTCGCCTGTCGCGATACGCTCCGCAGCGGCGGCGCCAGCTCCTGCGGT--GAGCGTCAGGTTCGACTGGGCCGGACCCCTTTCCCTCTTCC--CTCAGCTCCATCGGCCG-----------ACTTCTTGCTCC-GCGACCCTGCTGCCTGTCGCGACACGGCCTCAGCTCC---CGCCGGGCCCAAGCCGCGCGCTCGGGCCCAGCTTCGG--CTCGGGCGGGCGGGGACCCTCTCC----------------------TCTCTCT------------------------GTCCTCCCGCG-TCCGGAC------------------------TCCCGCGTGGCAGAGCGCCGG---------------------------------CCCCGGGTGCGAGGTGCCCGTCCTCCTCCGCGTCTGGCTGGGCTTG------ i mm10.chr7 I 2 C 0 s canFam3.chr1 19608312 375 - 122678785 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGTGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCCTCCTCCC-CC--------------------------------------GGCGCCACCACCGCCTGTCGCGACATggccgc--ccccgcacccccggcccccgcgggcggACCTC---C-------GGCTCCCGGCAGG-GGCGgcccc-------------------------------------------ggcgcccgcc----gccctgcc----cccgccccccgtgcccccctcgtccgcgccccgcggcg-------gcgccggaggtcccccgcgggggtccggtggtg----------cgggcgcgcgggg-ccgccccTTTCCGCGTCGGGGGCGGC----GGCTC i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102688610 635 - 106955855 M e rheMac3.chr19 59976746 434 + 64156825 M a score=286512.000000 s hg38.chr19_GL949747v2_alt 113205 122 + 729520 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTGCCTGCCCCCCTCGGCCTCGGTCCTTCGCGTTGTGGGGCAGCCTCCGCGCCGGGGCT-----TCTCCCTCGACGG s panTro4.chr19 59047191 122 + 63644993 CAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTGCCTGCCCCCCTCGGCCTCGGTCCTTCGCGTTGTGGGGCAGCCTCCGCGCCGGGGCT-----TCTCCCTCGACGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55923450 122 + 60714840 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTGCCTGCCCCCCTCGGCCTCGATCCTTCGCGTTGTGGGGCAGCCTCCGCGCAGGGGCT-----TCTCCCTCGACGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59977180 122 + 64156825 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTGCCTGCCCCCCTCGGCCTCGGTCCTTCGCGTTGGGGGGCAGCCTCCGCGCCGGGGCT-----TCTCTCTCGACGG i rheMac3.chr19 M 434 C 0 s macFas5.chr19 55001895 122 + 59248254 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTGCCTGCCCCCCTCGGCCTCGGTCCTTCGCGTTGGGGGGCAGCCTCCGCGCCGGGGCT-----TCTCTCTCGACGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47108172 122 + 51301725 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTgcctgcccccctcggcctcggTCCTTCGCGTTGGGGGGCAGCCTCCGCGCCGGGGCT-----TCTCTCTCGACgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46815346 120 + 50890351 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTGCCTGCCCCCCTCGGCCTCGGTCCTTCGCGTTGGGGGGCAGCCTCCGCGCCGGGGCT-------TCTCTCGACGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45390802 124 + 49145316 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTC-GGGCTCAGGTGCCTGCCCCCCTCGCCTTCGGTCCCTCGCGTTG-GGGGCAGCCT-CGCGCTGGGGCTTCTCTTCTCCCTCGACGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3645846 38 + 145441459 GAGCGGTGGG----------------------------------------------------------------------CGCGCTGCGGG-------CCGCGGAGGGGTC-----TTTC--------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19608687 90 - 122678785 -GGGGAGGGGGTCTCCACCCCGGGGCCAGGTCCC---------------------CCTGCAccgcccgccgccggccccc----------ggcAGCCTCCGC--CAAAGTT-----TGCCCCGCAGCGG i canFam3.chr1 C 0 I 263 e nomLeu3.chr10 102688610 635 - 106955855 M a score=24866.000000 s hg38.chr19_GL949747v2_alt 113327 15 + 729520 TGGCGGGGAGG--GGGG s panTro4.chr19 59047313 15 + 63644993 TGGCGGGGAGG--GGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55923572 17 + 60714840 TGGCGGGGCGGGTGGTG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59977302 15 + 64156825 TGGCGGGGTGG--GGGG i rheMac3.chr19 C 0 I 13 s macFas5.chr19 55002017 15 + 59248254 TGGCGGGGTGG--GGGG i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47108294 15 + 51301725 tggcggggtgg--gggg i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46815466 15 + 50890351 TGGCGGGGTGG--GGGG i chlSab2.chr6 C 0 I 12 s calJac3.chr22 45390926 11 + 49145316 TAGCGTGGAGG------ i calJac3.chr22 C 0 C 0 e mm10.chr7 3645884 0 + 145441459 C e canFam3.chr1 19608777 263 - 122678785 I e nomLeu3.chr10 102688610 635 - 106955855 M a score=2822.000000 s hg38.chr19_GL949747v2_alt 113342 7 + 729520 GTGGTGG s panTro4.chr19 59047328 7 + 63644993 GTGGTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55923589 7 + 60714840 GTGGTGG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55002033 7 + 59248254 GTGCCAA i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47108310 7 + 51301725 gTGCCAA i papAnu2.chr19 I 1 C 0 s calJac3.chr22 45390937 7 + 49145316 GTGCCAG i calJac3.chr22 C 0 I 4 s mm10.chr7 3645884 3 + 145441459 -TGC--- i mm10.chr7 C 0 C 0 e canFam3.chr1 19608777 263 - 122678785 I e nomLeu3.chr10 102688610 635 - 106955855 M e chlSab2.chr6 46815481 12 + 50890351 I e rheMac3.chr19 59977317 13 + 64156825 I a score=650.000000 s hg38.chr19_GL949747v2_alt 113349 1 + 729520 T s panTro4.chr19 59047335 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55923596 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55002040 1 + 59248254 C i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47108317 1 + 51301725 C i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 46815493 1 + 50890351 C i chlSab2.chr6 I 12 C 0 s calJac3.chr22 45390948 1 + 49145316 C i calJac3.chr22 I 4 C 0 s mm10.chr7 3645887 1 + 145441459 T i mm10.chr7 C 0 C 0 e canFam3.chr1 19608777 263 - 122678785 I e nomLeu3.chr10 102688610 635 - 106955855 M e rheMac3.chr19 59977317 13 + 64156825 I a score=3600.000000 s hg38.chr19_GL949747v2_alt 113350 1 + 729520 C s panTro4.chr19 59047336 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55923597 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59977330 1 + 64156825 C i rheMac3.chr19 I 13 C 0 s macFas5.chr19 55002045 1 + 59248254 C i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47108322 1 + 51301725 C i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 46815494 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45390949 1 + 49145316 C i calJac3.chr22 C 0 C 0 s mm10.chr7 3645888 1 + 145441459 C i mm10.chr7 C 0 C 0 e canFam3.chr1 19608777 263 - 122678785 I e nomLeu3.chr10 102688610 635 - 106955855 M a score=2493823.000000 s hg38.chr19_GL949747v2_alt 113351 889 + 729520 GGGACGAGGA-CCCCAGCTGGGTGGGGG-AGTCACCCTT-CCCAGGACCGAGG-CCGCCCTCCGCATCCCTCCTCACTG--CTCCCGGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCC---GTCTGTATCGGAT-GGGAGCCTCTTGGGAGAGGA--------GTGGAGGAGAAACTCCCC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCC--CTCTCATAGCGAGTAGCGCCCTGGGTGGCTCCAGCCTCGCCATCCCGCTGCACTGGGCGCCTGCCTTTTTGGGGGAGTTTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGTCTCAGCTCTCACACTTCTTTGATCCTGGCGTCT-----GCCCCTGGCTTTGCAGCCTTGAACTCCCCTGCATCGTGACTCTCCGACCTTCTGGGTGTGGGCGTCTCCCAGTGATATCAGG-ACCACTGTGGTCTTGTTGCTGGGGGCTGCTGGGATCCCCTGGCGCTCAGGTGCC--------------TGGT-GAAAGACACTAAG-CCGCCACGCTGTCCA-TGTT-AGTGAGCTCCCACTGCGGGCAGCACCAGCCCCTCTTTCTGAGCAGTCCCTGCCTCTCAGTGCAGGG-CGGCCACCCAC----CCCGGGGTGAGCTCTCCTGTCCTTTTGGTGAGGGGTTTTGATGTCTCCCCTCCCTCCCTTCACCCCTGCCTGAGTATGAGGCTTCTTCCATCTTCACACCAGTCTCCTCCTTTAGGGTGTCAGCTCTCCAAGGACCAAGAAGCCCACTGCCCTTGATATTTGCATCAGATCCCACACTGTGGGTTTGTTGACTTCCCATCTACCCTTA-----CGCTGGGTGTCAGCAGTT--GGAGAACAAGGGTTTCGCCTTCTGG s panTro4.chr19 59047337 886 + 63644993 GGGACAAGGA-CCCCAGCTGGGTGGGGG-AGTCACCCTT-CCCAGGACCGAGG-CCGCCCTCCGCATCCCTCCTCACTG--CTCCCGGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCT---GTCTCTATCGGAT-GGGAGCCTCTTGGGAGAGGA--------GTGGAGGAGAAACTCCCC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCC--CTC--ATAGCGAGTAGCGCCCTGGGTGGCTCAAGCCTCGCCATCCCGCTGCACTGGGCGCCTGCCTTTT-GGGGGAGTTTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTCAGCTCTCACACTTCTTTGATCCTGGCGTCT-----GCCCCTGGCTTTGCAGCCTTGAACTCCCCTGCATCGTGACTCTCCGACCTTCTGGGTGTGGGCCTCTCCCAGTGATATCAGG-ACCACTGTGGTCTTGTTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCAGGTGCC--------------TGGT-GAAAGACACTAAG-CCCCCACGCTGTCCA-TGTT-AGTGAGCTCCCACTGCGGGCAGCACCAGCCCCTCTTTCTGAGCAGTCCCTGCCTCTCAGTGCAGGG-CGGCCACCCAC----CCCGGGGTGAGCTCTCCTGCCCTTTTGGTGAGGGGTTTTGATGTCTCCCCTCACTCCCTTCACCCCTGCCTGAGTATGAGGCTTCTTCCATTTTCACACCAGTCTCCTCCTCTAGGGTGTCATCTCTCCAAGGACCAAGAAGCCCACTGCCCTTGATATTTGCATCAGATCCCACACTGTGGGTTTGTTGACTTCCCATCTACCCTTA-----CGCTGGGTGTCAGCAGTT--GGAGAACAAGGGTTTCGCCTTCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55923598 885 + 60714840 GGGACGAGGA-CCCCAGGTGGGTGGGGA-AGTCACCCTT--CCAGGACCGAGG-CCGCCCTCCGCATCCCTCCTCACTG--CTCCCGGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCC---GTCTGTATCGGAT-GGGAGCCTCTTGGGAGAAGA--------GTGGAGGAGAAACTCCCC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTTC--CTCTCCTAGCGAGTAGCGTCCTGGGTGGCTGAAGCCTCGCCATCCCGCTGCACCGGGCGCCTGCCTTTT-GGGGGAGTTTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTCAGCTCTCACACTTCTTTGATCCTGGCGTCT-----GCCCCTGGCTTTGCAGCCTTGAACTCCCCTGCATCCTAACTCTCCGACCTTCTGGGTGTGGGCCTCTCCCAGTGATATCAGG-ACCACTGTGGTCTTGGTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCGGGTGCC--------------TGGT-GAAGGACACTAAG-CCCCCACGCTGTCCA-TGTT-AGTGAGCTCCCACTGCGGGCAGCGCCAGCCCCTCTTTCTGAGCAGTCCCTGCCTCTCAGTGCAGGG-CGGCTACCCAC----CCCGGGGTGAGCTCTCCTGCCCTTTCGCTGAGGGGTTTTGATGTCTCCCCTCACTCCCTTCACCCCTGCCTGAGTATGTGGCTTCTTCCGCCTTCATATCAGTCTCCTCCTTTAGGGTGTCATCTCTCCAGGGACCAAGAAGCCCACTGCCCTTGATATTTGCATCAGATCCCACAC--TGGGTTTGTTGTCTTCCCATCTACCCTTA-----CGCTGGGTGTCCGCAGTT--GGAGAACAAGGATTTTGCCTTCCCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102689255 913 - 106955855 GGAACGAGGA-CCCAAGCTGGGTGGGGGAAGTCACCCTTCCCCAGGGCCGAGGCCCGCCCTCCGCATCCCTCCTCACTGGCTCCCCGGGAGCGGCAGCCTCCCCTGGATCTCAGGGTTCCCAGCTGCCCG--GTCTGTATTGGATGGGGAGCCTCTTGGGAGAAGA--------GTGGAGGAGAAACTCCCC-------------------------ATTAGTTTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCT--CTCTCATAGCGAGTAGCGCCCTGGGTGGCTCAAGCATCGCCATCCCGCTGCACCTGGCGCCTGCCTTTT-GGGGGAGTTTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTCAGCTCTCACACTTCTTTGATCCTGGCGTCT-----GCTCCTGGCTTTGCAGCCTCAAACTCCCCTGCATCCTGACTCTCCGACCCTCTGGGTGTGGGCCTCTCCCAGTGATATCAGG-GCCACTGTGGTCTTGGTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCAGGTGCCTGGTGAAGGCTTCGTGGT-GAAGGACACTAAG-CCCCCACGCTGTCCA-TGTT-AGTGAGCTCCCAATGCGGGCAGCGCCAGCCCCTCTTTCTGAGCAGTCCCTGCCTCTCAGTGCAGGG-CGGCCACCCAC----CCCGGGGTGAGCTCTCCTGCCCTTTTGGTGAGGGGTTTTGATGTCTCCCCTCACTCCCTTCACCCCTGCCTGAGTATGAGGCTTCTTCCGCCTTCACACCAGTCTCCTCCTTTAGGGTGTCATCTCTCCAGGGACCAAGAAGCTCCCTGCCCTTGATATTTGCATCAGATCCCACACTGTGGGTTTGTTGTCTTCCCATCTACCCTTA-----CGCTGGGTGTCAGCAGTT--GGAGAACAAGGGTTTCGCCTTCCCG i nomLeu3.chr10 M 635 C 0 s rheMac3.chr19 59977331 875 + 64156825 GGGACGAGGA-CCTCAGCGGGGTGGGGG-AGTCACCCTT-CCCAGGACCGAGG-CCACCCTCCGCATCCCTCCTCCGTG--CTCCCCGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCC---GTCCGTATCGGAT-GGGAGCCTCTTGGGAGAGGA--------GTGGAGGAGAAACTCCTC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCC--CTCTCGTAGCGAGAAGCGCCCTGGGTGGCTCAAGCCTCGCT-TCCCGCTGCACCGGGCGCCTGCCTTTT-GGGGGGGTCTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTCAGCTCTCACACTTCTTGGATAGTGCTGTCT-----GCCCCTGGCTTTGCAGCCTTGAACTCCCCTGCATCCTGACTCTCCGAC---CTGGGCGTGGGCCTCTCCCGGTGATGTCAGG-GCCACTGTGGTCTTGCTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCAGGTGCC--------------TGGT-GAAGGACACTAAGCCCCCCACGCTGTCCA-TGTT-AGTGAGCTCCCACTGCGGGCAGCGCCAGCCCCTCTTTCTGAGCAGTCCCTGCCGCTCAGTGCAGGG-CGGGCACCCCCCC-ACCCCAGGTGAGCTCTCCTGCCCTTTTGGTGAGGGGTTTTGATGTCTCCC---------TTCACCCCTGCCTG----TGAGGCTTCTTCTGCCTTCACACCAGTCTCCTCCTTTAGGATGTCATCTCTCCAGGGACCAAGAAGCCCACTGCCCTTGATATTTGCATCAGATCCCACACTGTGGGTTTGTTATCTTCCCATCTACCCTCA-----CACTGGGTGTCAGCAGTT--GGAGAACAAGGGTTTCGCTTTCCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55002046 874 + 59248254 GGGACGAGGA-CCTCAGCGGGGTGGGGG-AGTCACCCTT-CCCAGGACCGAGG-CCACCCTCCGCATCCCTCCTCAGTG--CTCCCCGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCC---GTCCGTATCGGAT-GGGAGCCTCTTGGGAGAGGA--------GTGGAGGAGAAACTCCTC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCC--CTCTCGTAGCGAGAAGCGCCCTGGGTGGCTCAAGCCTCGCT-TCCCGCTGCACCGGGCGCCTGCCTTTT-GGGGGGGTCTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTCAGCTCTCACACTTCTTGGATAGTGCTGTCT-----GCCCCTGGCTTTGCAGCCTTGAACTCCCCTGCATCCTGACTCTCCGAC---CTGGGTGTGGGCCTCTCCCGGTGATGTCAGG-GCCACTGTGGTCTTGCTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCAGGTGCC--------------TGGT-GAAGGACACTAAG-CCCCCATGCTGTCCA-TGTT-AGTGAGCTCCCACTGCGGGCAGCGCCAGCCCCTCTTTCTGAGCAGTCCCTGCCGCTCAGTGCAGGG-CGGGCACCCCCCC-ACCCCAGGTGAGCTCTCCTGCCCTTTTGGTGAGGGATTTTGATGTCTCCC---------TTCACCCCTGCCTG----TGAGGCTTCTTCTGCCTTCACACCAGTCTCCTCCTTTAGGATGTCATCTCTCCAGGGACCAAGAAGCCCACTGCCCTTGATATTTGCATCAGATCCCACACTGTGGGTTTGTTATCTTCCCATCTACCCTCA-----CACTGGGTGTCAGCAGTT--GGAGAACAAGGGTTTCGCTTTCCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47108323 871 + 51301725 GGGACGAGGA-CCTCAGCGGGGTGGGGG-AGTCACCCTT-CCCAGGACCGAGG-CCACCCTCCGCATCCCTCCTCACTG--CTCCCCGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCC---GTCCGTATCGGAT-GGGAGCCTCTTGGGAGAGGA--------GTGGAGGAGAAACTCCTC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCC--CTCTCGTAGCGAGAAGCGCCCTGGGTGGCTCAAGCCTCGCT-TCCCGCTGCCCCGGGCGCCTGCCTTTT-gggggggTCTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTGAGCTCTCACACTTCTTGGATAGTGCTGTCT-----GCCCCTGGctttgcagccttgaactcccctGCATCCTGACTCTCCGAC---CTGGGTGTGGGCCTCTCCCGGTGATGTCAGG-GCCACTGTGGTCTTGCTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCAGGTGCC--------------TGGT-GAAGGACACTAAG-CCCCCACGCTGTCCA-TGTT-AGTGAGCTCCCACTGCGGGCAGCGCCAGCCCCTCTTTCTGAGCAGTCCCTGCCTCTCAGTGCAGGG-CGGCCACCCAC----GCCGGGGTGAGCTCTTCTGCCCTTTTGGTGAGGGGTTTTGAAGTCTCCC---------TTCACCCCTGCCTG----TGAAGCCGCTTCTGCCTTCACACCAGTCTCCTCCTCTAGGGTGTCATCTCTCCAGGGACCAAGAAGCCCACTGCCCTTGATACTTGCATCAGATCCCACACTGTGGGTTTGTTGTCTTCCCATCTACCCTCA-----CACTGGGTGTCGGCAGTT--GGAGAACAAGGGTTTCGCTTTCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46815495 875 + 50890351 GGGACGAGGA-CCTCAGCGGGGTGGGGG-AGTCACCCTT-CCCAGGACCGAGG-CCACCCTCCGCATCCCTCCTCACTG--CTCCCCGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCC---GTCCGTATCGGAT-GGGAGCCTCTTGGGAGAGGA--------GTGGAGGAGAAACTCCTC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCC--CTCTCGTAGCGAGAAGCGCCCTGGGTGGCTCAAGCCTCGCA-TCTCGCTGCACCGGGCGCCTGCCTTTT-GGGGGGGTCTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTCAGCTCTCACACTTCTTGGATCGTGGTGTCT-----GCCCCTGGCTTTGCAGCCTTGAACTCCCCTGCATTCTGACTCT--GAC---CTGGGTGTGGGCCTCTCCCGGTGATGTCAGG-GCCACTGTGGTCTTGCTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCAAGTGCC--------------TGGT-GAAGGACGCTAAG-CCCCCACGCTGTCCA-TGTT-AGTGAGCTTCCACTGCAAGCAGCGCCAGCCCCTCTTTCTGAGCAGTCCCTGCCTCTCAGTGCAGGG-CGGCCACCCAC----CCCGGGGTGAGCTCTCCTGCCCTTTTGGTGAGGGGTTTTGATGTCTCCCCTCACTCCTTTCACCCCTGCCTG----TGAGG---CTTCTGCCTTCACACCAGTCTCCTCCTTTAGGGTGTCATCTCTCCAGGGACCAAGAAGCCCACTGCCCTTGATATTTGCATCAGATCCCGCACTGTGGGTTTGTTGTCTTCCCATCTACCCTCA-----CACTGGGTGTCAGCAGTT--GGAGAACAAGGGTTTCGCTTTCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45390950 847 + 49145316 GGGACGAGGACCCCCCCCTGGGTGCGGG-AGTCCCCCTT-CCCGGGGCCGAGG-CGGCCCCCTGCATCCGTCCGCACTG--CTCCCCGGAGC-GCAGCTTCCCCTGGACCTCGGG--TTGCAGCCGCCC---CTCCGTATCGGAC-----------------AGGA--------GTGGAGGAGAAACTCCGC-------------------------GCTAG-TTGGAGCCTCAGCCGAAGTTTCCAGCTCTGTAGTCTG-AGCAGTTCC--CTCTCTTAGCGAGAAGTGCCCTGGGCGGCTCAAGCCTCAGCATCCCG-------------CAGCCTTTC-CAGGGAGTCTGG------------------------------------------------------------CTTTCCTGGCACTGGGTTCCAGGACCGTCCTCGGTGTGGCCCCCGG-CTGGCCTCGGCTCTCACTCTT----GATTGTGGTGTCC-----GCCCCTGGCTTTGCAGAGGCGAACTCTCCTGCATCCTGACTCT--GACCTTCTGGGTGCGGGCCTCTCCCTGTGATGTCAGC-GCCACTGTGGTCCTGGCGCTGGGGGCTGCTGGGCTCCCCCAGCCCTCAGGTGCC--------------TGGT-GAAGGACACGAAG-CCCCCACACTTTCCA-CGTTAAGTCGGCTCC---------CAGCGCTAGCGCTTCTTTCTAGGCAGCCCCTGCTTCTCAGTGCAGCG-TGGTCACCCTCCCTCCCCGGGGTGAGCTCTCTTGGACTTTTGGTGAGGGGTGTTGGTGTCTTCC-TCACTCCCTTTGCCTCTGCCTGGGTATGAGGCTTCTTTCCCCTTCACACAAGTCTCCTCCTTTGGGGTGTCATCACTCCAGGGGCCAAGAGGCCCACTGCCCTTGCTGTTCGCATCAGATTCCCCACTGTGGGTTTGCTGACTT-CCGTCTACCCTCA-----CACTGGATGTCAGCAGTT--GGAGAACAAGGGTTGCGCCTCCCCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3645889 842 + 145441459 ------------------TGGGCGCGGG-GCCCACTCCT-----GCAGTCATG-CCTTCCCCGGGAGCTC-----------CATTCGGGAGC-GTTGCCTCAGTGCACCCGAAAG--CTCCAGCTTGTTGGTGTCTTGATAGGG--GGAAGCCTCTTTGGAAGAGATGGATCTTGTGGAGGAAAAAGTCCCCAAGACCCGAGGGTGCAGTTAACGTTGTGAG-TTGGAGCCTAAGCCAAAGTTTCCACCT-----------AGTCCTTACAGCTCTAGCAGTGA--AGTCTCCTAGAGG---------------TCCCTTTCCACCA---ATCTTCTTTTT-AAGGAAGCATGGGGTTtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTTTGTTTTAACACTCCCTCCCCAAACCTTGGATTCAGGACTGTACC--GTATTGCTCACTTCCTGGCTTCACATCTTTTGCATCTTTGA-GGTGGGGTATCAGTGGACTCTAGCTTTGGGGATGCAGGCTCCACTAC-----GATGCACGGTCTGCCTCGGTGGGTGAAGCTTCCTAAGTGGTTAGGTATTGCTGTG-----TGTGGTGAGGACCGCTTAGCTTTTCT----TTCTAGATCT--------------GGGTCGGTGGAATGCGAG-CTCCCATGCTTTCAGTTGTT-GGTGCTCTTCTGTTG-GGACAGTTGAAGCAC----TTCTAAACAG---CTGTATCTCGGTTCCGGGACTGTCATCCCT----CTTAGGATTAGCT-TTCTGTTCTTTTGGCTAGGGGCTT-----CCTCAC--------CGTCTCCCTTCCCCG-------------------------------GTCATCACCTGGACTGCCATCTCTCTG--------------------TATTTCCATTCTCATCTGCCCAGCCTATGTGGATATGTGATCTT-----TTATAATTGAAATCCACTGGGTGAAAGCGTTTCAGAGGTAGAATGGT----CCATCTCA i mm10.chr7 C 0 C 0 e canFam3.chr1 19608777 263 - 122678785 I a score=1828067.000000 s hg38.chr19_GL949747v2_alt 114240 562 + 729520 CCCCGCTGCTGGTACCCCATGAGAGTAGGAAGCTTCCTAGACCCG------GGTTCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTCACCTCCCCCAGGGATAAGGTTCTTGCCATCCTTGGTATTGGTATGG-CTGCTTTTCTGGATTTGAGGTGTCCACGCCTCTGCATGTGTCCCCACCGTAAGGCTGAGGACCCCTCTCGGATGCAGGTGCCCCCGGCTCATGCTTCCAAAACCCCCTCTTGATTTGTCACTGTATGGGGTAAGGCATAGTTTCCTG-GCTGTGTGGATGTAAGATACCTGAGTCTCAAGCGGGAGACTC-CACTGTAGACCCTGTCCCTGGGAC-CAGAGACTTCTCTGGTGTAGAC-TTTCCAAGGTGGGAGATTCCAGCCCCCCACCCTTGGCATGGGGCATCTC-AGT--------------GGAGATGACTACCTCTACCCCAGGCCCTAACGCATCCTTCTTCTGGAGTCTCAGAGCCTCTGTGTGGCCACGTCAGCAGCCAC----CTGGGTTAAGGATCACCCTTCA s panTro4.chr19 59048223 562 + 63644993 CCCCGCTGCTGGTACCCCATGAGAGTAGGAAGCTTCCTAGACCCG------GGTTCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTCACCTCCCCCAGGGATAAGGTTCTTGCCATCCTTGGTATTGGTATGG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTGCGTGTGTCCCCACCGTAAGGCTGAGGACCCCTCTCGGATGCAGGTGCCCCCGGCTAATGCTTCCAAAACCCACTCTTGATTTTTCACTGTATGGGGTAAGGCATAGTTTCCTG-GCTGTGTGGATGTAAGATACCTGAGTCTCAAGCGGGAGACTC-CACTGTAGACCCTGTCCCTTGGAC-CAGAGACTTCTCTGGTGTAGAC-TTTCCAAGGTGGGAGTTTCCAGCCCCCCACCCTTGGCATGGGGCATCTC-AGT--------------GGAGATGACTACCTCTACCCCAGGCCCTAACGCATCCTTCTTCTGGAGTCTCAGAGCCTCTGTGTGGCCACGTCAGCAGCCAC----CTGGGTTAAGGATCACCCTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55924483 562 + 60714840 CCCCGCTGCTGGTACCCCGTGAGAGTAGGAAGCTTCCTAGACCCG------GGTTCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTCGCCTCCCCCAGGGATAAGATTCTTGCCATCCTTGGTATTGGTACGG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTGCGTGTGTCCCCATCGTAAGGCTGAGGACCCCTCTCGGATGCAGGTTCCCCCGGCTAATGCTTCCAAAACCCCCTCTTGATTTTTCACTGTATGGGGTAAGGCATAGTTTCCTG-GCTGTGTGGATGTAAGATACCTAAGTCTCAAGCAGGAGACTC-CACTGTAGACCCCGTCCCTGGGAC-CAGAGATTTCTCTGGTGTAGAC-TTTCCAAGGTAGGAGTTTCCAGCCCCCCACCCTTGGCATGGGGCATCTC-AGT--------------GGAGATGACTACCTCTACCCCAGGCTCTAACGCGTCCTCCTTCTAGAGTCTCAGAGCCTCTGTGTGACCACATCAGCAGCCAC----CCGGGTTTAGGATCACCCTTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102690168 559 - 106955855 CCCCGCTGCTGGTACCCCATGAGAGTAGGAAGCTTCCTAGACTCG------GGTCCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTCGCCTCCCCCAGGGATAAGGTTCTTGCTATCCTTGGTATTGGTATGG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTGCGTGTGTCCCCACCATAAGGCTGAGGACCCCTCTCGGATGCAGGTGCCCCTGGCTAATGCTTCCAAAACCCCCTCTTGATTTTTCACTGTATGGGGTAAGGCATGATTTCCTG-GCTGCGTGGATGTAAGATACCTGAG--TCAAGCGGGAGACTC-CCCTGTAGACCCGGTCCCTGGGAC-CAGAGATTTCTCTGGTGCAGAC-TTTCCAAGGTAGGAGTATCCAGCCCCCTACCCTTGGCATGGGG-ATCTC-AGT--------------GGAGATGACTACCTCTACCCCAGGCCCTAACGCATCCTCCTTCCAGAGTCTCAGAGCCTCTGTGTGGCCACGTCAGCAGCCAC----CCGGGTTAAGGATCACCCTCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59978206 561 + 64156825 CCCCGCTGCTGGTACTCCATGGGAGTAGGAAGCTTCCTAGACCCG------GGTTCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAGGGACCCTTTCTTGGTGTTGCCTACCCCAGGGATAAGGTTCTTGCCATCCTTGGTATTGGTACGG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTACGTGTGTCCCCACCGTAAGGCTGAGGATCCCTCCCGGATGCAGGTGCCCCCGGCTAATGCTTCCAAAACCCCGTCTTGATTTTTCACTGTATGGGGTAAGGCATAGTTGCCTG-GCTGTGTGGATGTAAGATACCTGAGTCTCAAGCGGGAGACTC-CACTGTGGACCCCGTCCCTGGGAC-CAGAGACTTCTCTGGTGTAGAC-TTTCCAAAGTAGGAGTTTCCAGCCCCCAACCCTTGGCA-GGGGCATCTC-AGT--------------GGAGATGACTACCTCCACCCCAGGCCCTAACGCATCCTCCTTCTAGAGTCTCAGAGCCTCTGTGTGGCCATGTCAGCAGCCAC----CCAGGTTAAGGATCACCCTTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55002920 561 + 59248254 CCCCGCTGCTGGTACTCCATGGGAGTAGGAAGCTTCCTAGACCCG------GGTTCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTTGCCTCCCCCAGGGATAAGGTTCTTGCCATCCTTGGTATTGGTACGG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTACGTGTGTCCCCACCGTAAGGCTGAGGATCCCTCTCGGATGCAGGTGCCCCCGGCTAATGCTTCCAAAACCCCGTCTTGATTTTTCACTGTATGGGGTAAGGCATAGTTGCCTG-GCTGTGTGGATGTAAGATACCGGAGTCTCAAGCGGGAGACTC-CACTGTGGACCCCGTCCCTGGGAC-CAGAGACTTCTCTGGTGTAGAC-TTTCCAAAGTAGGAGTTTCCAGCCCCCAACCCTTGGCA-GGGGCATCTC-AGT--------------GGAGATGACTACCTCCACCCCAGGCCCTAACGCATCCTCCTTCTAGAGTCTCAGAGCCTCTGTGTGGCCATGTCAGCAGCCAC----CCAGGTTAAGGATCACCCTTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47109194 561 + 51301725 CCGCGCTGCTGGTACTCCATGGGAGTAGGAAGCTTCCCAGACCCG------GGTTCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTTGCCTCCCCCAGGGATAAGGTTCTTGCCATCCTTGGTATTGGTATCG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTGCGTGTGTCCCCACCGTAAGGCTGAGGATCCCTCTCGGATGCAGGTGCCCCCGGCTAACGCTTCCAAAACCCCGTCTTGATTTTTCACTGTATGGGGTAAGGCATAGTTGCCTG-GCTGTGTGGATGTAAGATACCTGAGTCTCAAGCGGGAGACTC-CACTGTGGACCCCGTCCCTGGGAC-CGGAGACTTCTCTGGTGTAGAC-TTTCCAAAGTAGGAGTTTCCAGCCCCCAACCCTTGGCA-GGGGCATCTC-AGT--------------GGAGATGACTACCTCCACCCCAGGCCCTAACGCATCCTCCTTCTAAAGTCTCAGAGCCTCTGTGTGGCCATGTCAGCAGCCAC----CCAGGTTAAGGATCACCCTTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46816370 561 + 50890351 CCCCGCTGCTGGTACTCCATGGGAGTAGGAAGCTTCCTAGACCCG------GGTTCCTGTACT-GTG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTTGCCTCCCCCAGGGATAAGGTTCTTGCCATCCTTGGTATTGGTATGG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTGTGTATGTCCCCACCATAAGGCTGAGGATCCCTCTCGGATGCAGGTGCCCCCGGCTAATGCTTCCAAAACCCCGTCTTGATTTTTCACTGTATGGGGTAAGGCATAGTTGCATG-GCTGTGTGGATGTAAGGTACCTGAGTCTCAAGCGGGAGACTC-CACTGTGGACCCCGTCCCTGGGAC-CAGAGACTTCTCTGCTGTAGAC-TTTCCAAAGTAGGAGTTTCCAGCCCCCAACCCTTGGCA-AGGGCATCTC-AGT--------------GGAGATGACTACCTCCACCCCAGGCCCTAACACATCCTCCTTCTAGAGTCTCAGAGCCTCTGTGTGGCCATGTCAGCAGCCAC----CGGGCTTAAGGATCACCCTTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45391797 556 + 49145316 CCCCCGTGCTGGTACCCCATGGGAGTAGGAAGCTTCCTCCACCCGGGTTCTGGTTCTTATACT-GCG-AGGTGGGGGGCGCTTCCCTCTAGGGCTGTACCTTCT-CTCCAGGGTGAGAACCCTTTCTTGCTGTTGCCTGCCCCAGGAAGAAGGTTCTTGCTATCCTTGGTATTGGTACAG-CTGCTCTCTTGGATTTGAAATGTCCACGCCTGTGTGTGTGTCCCCACCATAAGGCTGAGGACTCCTCTTGGATGCAGGTGCCCCCAGCTAATGCTTCT--AACCCCCTCTTGATTTCTCACTGTATGGGGTGAGGTAGAGGTTCCTG-GCTGTGT-GATGTCAG-TGCCTGAGCCTCAGTTGGGAGACTC-CACTATAGTCCCCGTCCCTGGGAC-C--AGACTCCTC----GTGTAC-CTTTCAAGGTGGGGGTTTCCAGCTCCCCACTCTTGGCA-TGTGCATCTC-AGT--------------GGAGATGACAGCCTCCACCCCAGGACCTAACATATCCTCCTTCCAGAGTCTCAGGGCCTC--TGTGGCCACATCAGCAGCCAC----CCGGGTTAAGGATCACCCTTCA i calJac3.chr22 C 0 I 723 s mm10.chr7 3646731 505 + 145441459 CCCA---ACTGGCACCCTGTAGGACTGCTAGCTCTCCTCA--CCG------GAGTCTTCTGCT-GTGTAAGG-GGTAGCCTTTCTCCCTGCAGTTGTGTTGTCT-TTGTCGGGTAGG----------TGTTGTCACCTGCC----AGGTAAAGTCCCTGCCTTCTTTGCTATTGGCATCATCCCCTTTCTTGCGTTTGAGATGGCCACACC---ACCTATGTACCCAGTGTGAGGCT-AGGAT-ACTCTTGGGTGTGGGTGCCCCTGGCTAGTGTGACT---CCTCCTTTGTGGTTTTTCTGTG--------AAGTTATGGTTTCTTGTTCTGTGT-------------CTGAGACCTGGGTGAGAGA--C-CACTGTGGTCACTTTGCTTGGGAC-TAAAGA--GCATAAGGGGTGAC-TTTTCAAGGTGTCAGTTT----CTCCTTACCTTGGTTTTTGGGCCTCTCTAGG--------------GGAAACAGTTACTTCTA-AGCAGGGTCTACTTTATTTACC--------TCAGAGAATCTTCCTGTGGCAGTGCCAGCATCCTCTCCACTAGGTTCAAGTTCCACTTTGA i mm10.chr7 C 0 C 0 s canFam3.chr1 19609040 484 - 122678785 CCCAGGTACCGGGGACCCCTGGGAGCCTGAGGCCTCCTAGGGCTGA-----GGCTCCCCTACCAATG-AGAC-ATGTGCACTTTGCT-GGGGGGTGTGCTTTCTCCTCCAGGGCAAGGAAACTTTCTCGGTGTTGCTTCCCCCAGGCAGCGGGTTCCTGCCCCGGTGGGCCCTGGCCCGT-GT-------TAGGTGT-AGGTGCACAGGGCAGCGCTTCTGCCCCTTCCTGCATGCT----------CTCAGGTGTGGCT--------CTAAGGCTTCCA-----CCCTCTCAG--------------------------------CG-GCTG------------------------------GGAGACCCTCGCCGTTG--TCAGTCTGCGAAGCACGGAGTTTCCTCTGCTGTAGTCTTTTCCCCGGGTGGGGTTCCCAGGCCCCCATCCTTGGTG-TCAGCCTCCC-TGTGTGTGTGTGTGTGGGGGGGTGACTACCTGCACCCTAGGCTCTA-CATGTCCCTCCTCCAGGGTCTCAGGAGCATTGTGTGGCTCCGTCAGCAGCCTC----CTGGGCTAAGGATTGCTCTCCA i canFam3.chr1 I 263 C 0 a score=7625.000000 s hg38.chr19_GL949747v2_alt 114802 3 + 729520 ACA s panTro4.chr19 59048785 3 + 63644993 ACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55925045 3 + 60714840 ACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102690727 3 - 106955855 ACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59978767 3 + 64156825 ACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55003481 3 + 59248254 ACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47109755 3 + 51301725 ACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46816931 3 + 50890351 ACA i chlSab2.chr6 C 0 C 0 s mm10.chr7 3647236 3 + 145441459 GTG i mm10.chr7 C 0 C 0 s canFam3.chr1 19609524 3 - 122678785 GCG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45392353 723 + 49145316 I a score=2016699.000000 s hg38.chr19_GL949747v2_alt 114805 688 + 729520 TCACTTCTCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGTGCCTCATGA-CAAAGACCACTCTGTGGGCACATGACGGCCCC------CAAGGTTAAGGACCACCCGGTGTTAGTTTCCCAGGGCTGA-CCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATCATCTTCCCTGAGATGAAGTCTGGGGGGCTCTTCTTTACTG--GTTTTGGCTCT-GATTTTAGCG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCT-----CACCTCCCCCCGCCCC-GCCACCCGCCTTGTGGGTCCCTTCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAGTCTCCTCCTGGGCCGAGGTTCCCAGATTCCTCAGTGCTCTTG-----------GAGAGCCTTTGCTGCTGGAGCACAGGTTCTTC-ACG--------------CCTGAGA------------GTGGACCTGCGATCACCACC-TTCCTTGGAGGATCT-----------TGGTGGATGCCCCCCTGACTACAGCAAATGGGGCTCTTTCTTCTCTGGCGGCGTCTCTGCTTCGAGACTCAGGCTCCAGCTTCCCTTCTCTCTGGTCCTTTGCT----GGGGGGACCAGAG--GTACAGATAC-----CCTCATGATATAAGG---------ATTTTCTTA-----GC-GGGGAAGGTGTTGTCTCTACTGTGGC----------TAAGGCTCCAGCCTCTCTAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC s panTro4.chr19 59048788 690 + 63644993 TCACTTCTCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGTGCCTCATGA-CAAAGACCACTCTGTGGGCACATGACGGCCCC------CAAGGTTAAGGACCACCCGGTGTTAGTTTCCCAGGGCTGA-CCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATCATCTTCCTTGAGATGAAGTCTGGGGGGCTCTTCTTTACTG--GTTTTGGCTCT-GATTTTAGCG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCT-----CACCTCCCCCCCCCCCCGCCACCCGCCTTGTGGGTCCCTTCCCCTGTGGGGATGTGTGTTCCTCTTGGGTAAGTCTCCTCCTGGGCCGAGGTTCCCAGATTCCTCAGTGCTCTTG-----------GAGAGCCTTTGCTGCTGGAGCACAGGTTCTTC-ACG--------------CCTGAGA------------GTGGACCTGCGATCACCACC-TTCCTTGGAGGATCT-----------TGGTGGATGCCCCCCTGACTACAGCAAATGGGGCTCTTTCTTCTCTGGCGGCGTCTCTGCTTCGAGACTCAGGCTCCAGCTTCCTTTCTCTCTGGTCCTTTGCT----GGGGGGACCAGAG--GTACAGATAC-----CCTCATGATATAGGG---------ATTTTCTTA-----GC-GGGGAAGGTGTTGTCTCTACTGTGGC----------TAAGGCTCCAGCCTCTCTAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55925048 677 + 60714840 TCACTTCCCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGTG---TATGA-CAAAGACCACTCTGTGGGCACATGACGGCCCC------CAAGGTTAAGGACCACCCGGTGTTAGTTTCCCAGGGCTGAGCCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATTATCTTCCCTGAGATGAAGTTTGGAGAGCTCTTCTTTACTG--GTTTTGGCTCT-GATTTTAGCG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCT-----CA---CCCCACGCCCC-------CGCCTTGTGGGTCCCTTCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAGTCTCCTCCTGGGCTGAGGTTCCCAGATTCCTCAGTGCTCTTG-----------GAGAGCCTTTGCTGCTGGAGCACAGGTTCTTC-ACG--------------CCTGAGA------------GTGGACCTGCGATCACCGCC-TTCCTTGGAGGATCT-----------TGGTGGATGCCCCCCTGACTACAGCAGATGGGGCTCTTTCTTCTCTGGCGGCGTCTCTGCTTTGAGACTCAAGCTCCAGCTTCCCTTCTCTCTGGTTCTTTGCT----GGGGGGACCAGAG--GTACAGATAC-----CCTCATGATATAGGG---------ATTTTCTTA-----GC-GAGGAAGGTGTTCTCTCTGCTGTGGC----------TAAGGCTCCAGCCTCTCTAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102690730 677 - 106955855 TCACTTCCCAGAGCTCCTTGCTGCCGAGGCGGAAGCTCTCCCAGATCAAAGGCGTCTCATGA-CAAAGACCACTCTGTGGGCACATGACGGCGCC------CAAGGTTAAGGACCACCCGGTGTTAGTTTCCCAGGGCTGAGCCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATCATCTTCCCTGAGATGGAGTGTGGGGGGCTCTTCCTTACTG--GTTTTGGCCCT-GATTTTAGCG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCT-----CA---CCCCACCCCCC--------GCCTTGTGGGTCCCTTCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAAT---CTCCTGGGCCGAGGTTCCCAGATTCCTCAGTGCTCTTG-----------GAGAGCCTTTGTTGCTGGAGCACAGGTTCTTC-ACA--------------CCTGAGA------------GTGGACCTGTGATCACCACC-TTCCTTGGAAGATCT-----------TGGTGGATGCCCCCCTGACTACAGCAAATGGGGCTCTTTCTTCTCTGGTGGCGTCTCTGCTTCGAGACTCAAGCTCCAGTTTCCCTTCTGTCTGGTCCTTTGCT----GGGGGGACCAGAG--GTACAGACAC-----CCTCATGATATAGGG---------ATTTTCTTA-----GCGGGGGAAGGTGTTGTCTCTGCTGTGGC----------TAAGGCCCTAGCCTCTCTAGGGGAGAAGTACCCTGGGCCTCTGGCACTTGCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59978770 674 + 64156825 TCAGTTCCCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGCGCCTCATGA-CAAAGACCACTGTGTGGGCACATGACAGCCCC------CAAGGTTAAGGACCGCCCAGTGTTAGTTCCCCAGGACTAAGCCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATCATCTTCCCTGAGGTGAAGTTTGGGGGGTTCTTCTTTACTG--GTTTTGGCCCT-CATGTAGGTG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCT-----CA---CCCCACCCCAC--------CCCTTGTGGGTCCCTGCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAGT---CTCCTGGGCCAAGGCT-CCAGACTCCTCAGTGCTCTCG-----------GAGAGCCTTTGCTGCTGCAGCGCAGGTTCTTC-ACG--------------CCTGGGA------------GCGGACCTGCGATCACCGCC-TTCCTTGGAGGATCT-----------TGGTGGACGCCCCGCGGACTGCAGCAAATGGGGCTCTTTCTTCTCTGGCAGCGTCTCAGCTTCGAGACTCAAGCTCCAGCTTCCCTTCTCTCTGGTCCTTTGCC----AGGGGGACCAGAG--GTACAGACAC-----CCTCATGATATAGGA---------ATTTTCTT------GG-GGGGAAGGTGTTGTCTCCGCTGTGAC----------TAAGGCTCCAGCCTCTATAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55003484 675 + 59248254 TCAGTTCCCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGCGCCTCATGA-CAAAGACCACTGTGTGGGCACATGACAGCCCC------CAAGGTTAAGGACCGCCCAGTGTTAGTTCCCCAGGACTAAGCCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATCATCTTCCCTGAGGTGAAGTTTGGGGGGTTCTTCTTTACTG--GTTTTGGCCCT-CATGTAGGTG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCT-----CA---CCCCACCCCAC--------CCCTTGTGGGTCCCTGCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAGT---CTCCTGGGCCAAGGCTCCCAGATTCCTCAGTGCTCTCG-----------GAGAGCCTTTGCTGCTGGAGCACAGGTTCTTC-ACG--------------CCTGGGA------------GTGGACCTGCGATCACCACC-TTCCTTGGAGGATCT-----------TGGTGGACGCCCCGCGGACTGCAGCAAATGGGGCTCTTTCTTCTCTGGCAGCGTCTCAGCTTCGAGACTCAAGCTCCAGCTTCCCTTCTCTCTGGTCCTTTGCC----AGGGGGACCAGAG--GTACAGACAC-----CCTCATGATATAGGA---------ATTTTCTT------GG-GGGGAAGGTGTTGTCTCCGCTGTGAC----------TAAGGCTCCAGCCTCTATAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47109758 676 + 51301725 TCAGTTCCCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGCGCCTCATGA-CAAAGACCACTGTGTGGGCACATGACAGCCCC------CAAGGTTAAGGACCGCCCAGTGTTAGTTCCCCAGGACTAagcctcctgc-----ccctccctcctcgAGT------------CTTTGTGTGGTGGTATCATCTTCCCTGAGGTGAAGTTTGGGGGGTTCTTCTTTACTG--GTTTTGGCCCT-CATGTAGGCG--TGTTGGCTCCTGTGAGGCTGGTGTCCtgct-----ca---ccccaccccac--------cccttgtGGGTCCCTGCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAGT---CTCCTGGGCCAAGGCTCCCAGATTCCTCAGTGCTCTTG-----------GAGAGCCTTTGCTGCTGGAGCACAGGTTCTTC-ACG--------------CCTGGGA------------GTGGACCTGCGATCACCACC-TTCCTTGGAGGATCT-----------TGGTGGATGCCCCGCGGACTACAGCAAATGGGGCTCTTTCTTCTCTGGCAGTGTCTCTGCTTCGAGACTCAAGCTCCAGCTTCCCTTCTTTCTGGTCCTTTGCC----GGGGGGACCAGAG--GTACAGACAC-----CCTCATGATATAGGA---------ATTTTCTTA-----GG-GGGGAAGGTGTTGTCTCCGCTGTGAC----------TAAGGCTCCAGCCTCTCTAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46816934 692 + 50890351 TCAGTTCCCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGCTTCTCATGA-CAAAGACCACTGTGTGGGCACATGACAGCCCC------CAAGGTTAAGGACCGCCCAGTGTTAGTTCCCCAGGACTAAGCCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATCATCTTCCCTGAGGTGAAGTTTGGGGGGTTCTTCTTTACTG--GTTTTGGCCCT-CATTTAGGCG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCTCACCCCA---CCCCACCCCAC--------CCCTTGTGGGTCCCTGCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAGT---CTCCTGGGCCAAGGGTCCCAGATTCCTCAGTGCTCTTGAGAGAGCCTCAGAGAGCCTTTGCTGCCGGAGCACAGGTTCTTC-ACA--------------CCTGGGA------------GTGGACCTGCAATCACCACC-TTCCTTGGAGGATCT-----------TGGTGGACGCCCTGCTGACCACAGCAAATGGGGCTCTTTCTTCTCTGGCAGCGTCTCTGCTTCGAGACTCAAGCTCCAGCTTCCCTTCTCTCTGGTCCTTTGCC----GGGGGGACCAGAG--GTACAGACAC-----CCTCATGATATAGGA---------ATTTTCTTA-----GG-GGGGAAGGTGTTGTCTCCGCTGTGAC----------TAAGGCTCCAGCCTCTCTAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45393076 672 + 49145316 TCACTTCCCGGAGCTCCTTGCTGCCGAGGCGGAAGCTCTTCCAGATCAAAGGCGCCTCATGA-C--AGACCACTCTGTGGGCACAGGAT-GTCTC------CAAGATTAAGGACCGTCCGGTGTTAGCTCCCCAGGACAGAGCCTCCTGCCCCCTCCCTCCTTCCTCAATT------------GTTTGTGTGGTGGTATCATCTTCCCTAAAGTGAAGTTTGGGGG-----TCTTTACTG--GTTTTGACCCC-CGTTTTAGCA--TGTTGGCTCCTGTGGGGCTGGTGTCCTCCT-----CA---CCCCACCCCTT-------AGCC---TGGGTCCCTGCCC-TGTGGGAATGAGTGTTCCTCTTGGGTAAGTGTCCTCCTGGGCCAGGGTTTGCAGACTCCTCAGTGCTACTG-----------GAGAGCCCTTGCCGCCAGAGCACAAGCTCCTCTGTG--------------CCCAAGA------------GTGGACCCACAATTGTTAGC-TTCCTTGGAGGATCT-----------TGGTGGATGCCGCCC-GACTACAGCAAATGGGGCTCTTTCTTCTCTGGTGGCATCTCCGCTTCGAGACTGAAGCTCCAGCTCCCCTTCTCTCTGGTCCTTTTTA----GGGGGAACCTGAG--GTACAGACAT-----TCTCAGGCTACAGAG---------ATTTTCTTA-----GT-GGGGAAGGTGTTGTCTCCAC--TGGC----------TAAGGCTCCAGCCTGTCTAGGGGACAAGTACTCTGGGCCTTGGGCACTTGCTC i calJac3.chr22 I 723 C 0 s mm10.chr7 3647239 586 + 145441459 CTGCTTGCCACCATCCCTGGCTTCA---GTGTGAGCCCTCTTAGCCC-----TGTGCTATGCTCCAAGATGCTTCTGTGGTCACTTAGCAGTACCAGGCTTCAAAATTAAGG--------------------------------TTGTAC-----CCCT---TCATCAGGT------------CTCTGAATGATGGC-TTGGCACCTGTGGTGAGAAGTTCTATAGATTGTTCTGT------------------------------TGTTGGCTCC-----------TATTTTGAG-----TA-----------CTT--------GATTTGAGGATTTGCTACA-GCTGTGGACAGATGATCCTAATGATTTTGC---TTCCACAGACG-----CCCAGCTTCCTCCATGCTGTTT-----------GAGACCCTTCACCATCTATACATGTATTCTGT-GTGAAGGTGTTTGCTTACCTCACA------------AGGGCCCTGTAGTGATGGCC-TCCTCGAGCAGGACC-----------TGGGAAGTG----------------GGATGGG---CAGTCTTCTGTGGTGGCACCTCTACTTTGAGGCTCTAGCACTTG-----------------CCTCTGTT----TGCAGAACTTGTGCAGTCTATGCACCTTCTCCTTGTGAAGTGGGGCTTGGTTTTGTTTTGTTGTATGTGG-AGAGAAGGTATTGCCTCCACTCTGGC----------TGTGGCTCCAGCCTC--TAAAACACAAA-GTCCTGGCTCTGTGGGCCTTGTTC i mm10.chr7 C 0 I 756 s canFam3.chr1 19609527 637 - 122678785 TCACTTCCCAGTGT--------------GCCAAAGCT--------------------------CCTGGTCCACTGTG----------ACAGCCCC------CGGGGTTAGGGA------------------------CTAGGCTTTCTGC-----CCT--CCTCCCCGGGTCCCCGGCAAGGCCTCTCTGTGACTGTGCCCTTTCCCCGGAGCTGAGGTTTTGGGGGTTGTCCATGATTGTCATTTTGGTCCTGCATTGAAATGGCTGTTGCCTCCCATGGGTCTGGCGCACTACT-----TA---CCCCAACCCCA-----------GAATGGGCTCCTG----GGGAGGGATGAG------ACTTGGTGAAGC---CTCTTGGGCCAGGGCTTCTTGTTTCCTCAGTTATGTTT-----------GAGACACTTTGCTATGAGCGTGGGAGCTCTTTGGTG--------------CCTGAGATCCCCTGTCTCGGTGGGCCTACTGTGGTTACCTTTTCCTTGAGGATCCCCCAGGAGCCATGGGGGTTCCCAGCTCTATTA----GAATGGGGCTTTTCCGTT----GTGGCACCTCCACTTCAAGGCCCAGGCTCCAGTTCTCTTTATCTCTGGTCCCTTGTTTCAGGGTGGGGGAGGGA--GAGCATCTTT-----CTTCAAAGGCAGGGG---------CTGTTGCTCCC---AC-AGCAAAGGC-TCCTGTCCACTGTAGCACCCAGCCCAGAAGGTGCAAGTACCCAGAAGGTGCAAGTACCCTGGGCC-CTGGTGCCTCCCA i canFam3.chr1 C 0 C 0 a score=257185.000000 s hg38.chr19_GL949747v2_alt 115493 92 + 729520 CTTCTCTGTGGAGGAGCTGCCTCCTCACTGGGTCTCAGCTGTAGCCGACTTCGATGTCA----CACTGTTCTGTCTGAAACATCACCTCCCTGGGT s panTro4.chr19 59049478 92 + 63644993 CTTCTCTGTGGAGGAGCTGCCTCCTCGCTGGGTCTCAGCTGTAGCCAACTTCGATGTCA----CACTGTTCTGTCTGAAACATCACCTCCCTGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55925725 92 + 60714840 CTTCTCTGTGGAGGAGCTGCCTCCTCGCTGGGTCTCAGCTGTAGTCAACTTCGATGTCA----CGCTGTTCTGTCTGAAACATCACCTCCCTGGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102691407 96 - 106955855 CTTCTCTGTGGAGGAGCTGCCTCCTCTCTGGGTCTCAGCTGTAGTCGACTTCGATGTCACGCTCGCTGTTCTGTCTGAAACATCACCTCCCTGGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59979444 92 + 64156825 CTTCTCTGTGGAGGAGCTGCCTCCTCGCTGGGTCTCAGCTGTAGCTGACTTCGATGTCA----CGCTGTTCTGTCTGAAACATCACCTCCCTGGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55004159 92 + 59248254 CTTCTCTGTGGAGGAGCTGCCTCCTCGCTGGGTCTCAGCTGTAGCTGACTTCGATGTCA----CGCTGTTCTGTCTGAAACATCACCTCCCTGGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47110434 92 + 51301725 CTTCTCTGTGGAGGAGCTGCCTCCTCGCTGGGTCTCAGCTGTAGCTGACTTCGATGTCA----CGCTGTTCTGTCTGAAACATCACCTCCCTGGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46817626 92 + 50890351 CTTCTCTGTGGAGGAGCTGCCTCCTCGCTGGGTCTCAGCTGTAGCCGACTTCGATGTCA----TGCTCTTCTGTCTGAAACATCACCTCCCTGGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45393748 71 + 49145316 CTTCTCTGTGGAGGAGCTGCCTCCCC-------------------TGACTTTGATGTCA----CATTGTTCTGTCTGAAGCATCGCCT--CTGGGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19610164 47 - 122678785 -----CAGATCCAGGGTTGTCTTCCC--TGGGCC-----------------------CA----AGATGTCCTCTC---------------CTGGGT i canFam3.chr1 C 0 C 0 e mm10.chr7 3647825 756 + 145441459 I a score=2171598.000000 s hg38.chr19_GL949747v2_alt 115585 726 + 729520 TAGCGCTCTTGTTCCCCTC---------CTTCTGGCTTGTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGTG-G----GTATTCTTCCTCTGCACTAGGATACCAGTCCTTTCCGTGTGGAGACACAGGGAGGGCGTCACCTGCCTAAGGTGTTGATTGCCTTGTTTAGGGGTGTAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCATGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGTG---TAAACTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCCCTGCACACCTGAGCTCTGGTGTCCAGGCCCT---TGCCTTGTGTGAGCTCCCTGGGTCAAAGGGGCTTTCCCCTCCTCAGCCTGAATCCCCACTGTGGCACCTTCTCCTGGGTCCTTTTGTTGGTTGCTTTGCCTTCTTAGAGA-----------------TTCCCCA-GGTAGGGCGTGATAGCTGA-------CCTGGGCGGGGGCTGCTGC-------GGCTTTCTTTAGGTTGGGCCTTTTACTGAGGAGATTTAAATTCCCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTATCACCCAGAATGGGTCCCTGCGG----TGTTGG-----GAAAATTCTCCCTGG---GGGTAAGGTACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCATATcc----------gtcc-ca---tatggttgctgctagt s panTro4.chr19 59049570 726 + 63644993 TAGGGCTCTTGTTCCCCTC---------CTCCTGGCTTGTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGCG-G----GTATTCTTCCTCTGCACTAGGATACCAGTCCTTTCCGTGTGGAGACACAGGGAGGGCGTCACCTGCCTAAGGTGTTGATTGCCTTGTTTAGGGGTGTAGACCATGAGGCCTCTTCTCTCTCG-GGGCTGGGGCACCTGCCCATGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGTG---TAAGCTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCCCTGCACACCTGAGCTCTGGTGTCCAGGCCCT---TGCCTTGTGTGAGCTCCCTGGGTCAAAGGGGCTTTCCCCTCCTCAGCCCGAATCCCCACTGTGGCACCTTCTCCTGGGTCCTTTTGTTGGTTGCTTTGCCTTCTTAGAGA-----------------TTCCCCA-GGTAGGGCGTGATAGCTGA-------CCTGGGCGGGGACTGCTGC-------GGCTTTCTTTAGGTTGGGCCTTTTACTGAGGAGATTTAAATTCCCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTATCACCCAGAATGGGTCCCTGCGG----TGTTGG-----GAGAATTCTCCCTGG---GGGTAAGGTACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCATATcc----------gtcc-ca---tatggttgctgctagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55925817 726 + 60714840 TAGGGCTCTTGTTCCCCTC---------CACCTGGCTTCTGACCCCTCCAGGACTTCGTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGGG-G----GTATTCTTCCTCTGCACTGGGATACCAGTCCTTTCCATGTGGAGACACAGGGAGGGCGTCACCTCCCTAAGGTGTTGATTGCCTTGTTTAGGGGTGTAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCATGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGTG---TAAGCTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCCCTGCACACCTCAGCGCTGGTGTCCAGTCCCT---TGCCTTGTGTGAGTTCCCTGGGTCAAAGGGGCTTGCCCCTCCTCAGCCTGAATCCCCATCGTGGCGCCTTCTCCTGGGTCCTTTTGTTGGTTGCTTTGCCTTCTTGGAGG-----------------TTCCCCA-GGTAGGGCGTGTTAGCTGA-------CCTGGGCGGGGGCTGCTGC-------CGCTTTCTTTAGGTTGGGGCTTTTACCGAGGAGACTTAAGTTCTCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTACCACCCAGAATGGGTCCCTGCGG----TGTTGG-----GAAAATTCTCCCTGG---GGGTAAGGTACCAGCCCTGT---CCTTT----ATGGGCTGCTTGTTCTAAAGCACACcc----------gtcc-ca---tatggttgctgctagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102691503 727 - 106955855 TAGGGCTCTTGTTCCCCTC---------CACCTGCCTGCTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGGG-G----GTGTTCTTCCTCTGCACTAGGGTACCAGTCCTTTCCGTGTGGAGACACAGGGAGGGCATCACCTCCCTAAGGTGTTGATTGCCTTGTTGAGGGGTGTAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCGTGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGTG---TAAGCTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTCAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCCCTGCACACGTCAGCGTTGGTGTCCAGGCCCT---TGCCTTGTATACGCTCCCTGGGTCAAAGGGACTTGCCCCTCCTCAGTCTGAATCCCCTCCATGGCACTTTCTCCTGGGTCCTTTTGTTGGTTGCTTTGCCTTCTTGGAGA-----------------TTCCCCA-GGTACGGCATGTTAGCTGA------CCCTGGGCGGGGGCTGCTGC-------CGTTTTCTTTAGGTTGGGCTTTTTACTGAGGAGACTGAAGTTCCCACAAGTGTAAG--GTAGCA-------CCCCTACCTATTACCACCCAGAATGGGTCCCCCCGG----GGTTGG-----GAAAATTCTCCCTGG---GGGTAAGGTACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCACACcc----------gtcc-ca---tatggttgctgctagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59979536 731 + 64156825 TAGGGCTCTTGTTCCCCTC---------CAGCTGGCTGCTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGGG-G----GTGTTCTTCCTCTGTGCTAGGGCACCAGTCCTTTCCGTGTGGAGACGCAGGGAGGGTGTCACCTCCCTAAGGTGTCGATTGCCTTGTTTAGGGGTGAAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCATGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGCG---TACGCTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCTCTGCACACCTCAGGGTTGGTGTCCAGGCCCT---TGCCTTGTATAAGCTCCCTGGATCAAAGGGACTTGCCCCTCCTCAGTCAGAATCCCCACTGCGGCACTTTCTCCTGGGTCCTTTTGTT-GTTGCTTTGCCTTCCTGGAGA-----------------TTCCCCA-GGTGTGGCATGTTAGCTGACTCTGACTCTGAGCGGGGG-TGCTGC-------CTTTTGCTTTAGGTTGGGCCTTTTACTGAGGAGATTTAAGTCCCCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTACCACCCAGAATGGGTCCCGGCAG----TGTTGG-----GAAAGTTCTCTCTGG---GGTTAGGGTACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCACACcc----------gtcc-ta---tatggttgctgctagt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55004251 731 + 59248254 TAGGGCTCTTGTTCCCCTC---------CAGCTGGCTGCTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGGG-G----GTGTTCTTCCTCTGTGCTAGGGCACCAGTCCTTTCCGTGTGGAGACGCAGGGAGGGTGTCACCTCCCTAAGGTGTCGATTGCCTTGTTTAGGGGTGAAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCATGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGCG---TACGCTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCTCTGCACACCTCAGGGTTGGTGTCCAGGCCCT---TGCCTTGTATAAGCTCCCTGGATCAAAGGGACTTGCCCCTCCTCAGTCAGAATCCCCACTGCGGCACTTTCTCCTGGGTCCTTTTGTT-GTTGCTTTGCCTTCCTGGAGA-----------------TTCCCCA-GGTGTGGCATGTTAGCTGACTCTGACTCTGAGTGGGGG-TGCTGC-------CTTTTGCTTTAGGTTGGGCTTTTTACTGAGGAGATTTAAGTCCCCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTACCACCCAGAATGGGTCCCGGCAG----TGTTGG-----GAAAGTTCTCTCTGG---GGTTAGGGTACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCACACcc----------gtcc-ta---tatggttgctgctagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47110526 731 + 51301725 TAGGGCTCTTGTTCCCCTC---------CAGCTGGCTGCTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGGG-A----GTATTCTTCCTCTGTGCTAGGGCACCAGTCCTTTCTGTGTGGAGACGCAGGGAGGGTGTCACCTCCCTAAGGTGTTGATTGCCTTGTTTAGGGGTGAAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCAGGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGCG---TAAGCTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTGTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCCCTGCACACCTCAGGGTTGGTGTCCAGGCCCT---TGCCTTGTATAAGCTCCCTGGATCAAAGGGACTTGCCCCTCCTCAGTCAGAATCCCCACTGCGGCACTTTCTCCTGGGTCCTTTTGTT-GTTGCTTTGCCTTCCTGGAGA-----------------TTCCCCA-GGTGTGGCATGTTAGCTGACTCTGACTCTGAGTGGGGG-TGCTGC-------CTTTTGCTTTAGGTTGGGCCTTTTACTGAGGAGATTTAAGTCCCCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTACCACCCAGAATGGGTCCCGACAG----TGTTGG-----GAAAGTTCTCTCTGG---GGTTAGGGGACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCACACCC----------GTCC-TA---TATGGTTGCTGCTAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46817718 730 + 50890351 TAGGGCTCTTGTTCCCCTC---------CAGCTGACTGCTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACCGT--GTGG---------TCTCCTCTCTGGG------GTATTCTTCCTCTGTACTAGGGCACCAGTCCTTTCTGTGTGGAGACGCAGGGAGGGTGTCACCTCCCTAAGGTGTTGATTGCCTTGTTTAGGGGTGAAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCATGACCCTCTGTTGGGTTCCTGGGATGGAAAGTGGGAGCG---TAAGCTCTTGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCCCTGCACACCTCAGGGTTGGTGTCCAGGCCCT---TGCCTTGTATAAGCTCCCTGGATCAAAGGGACTTGCCCCTCCTCAGTCAGAATCCCCACTGCGGCACTTTCTCCTGGGTCCTTTTGTT-GTTGCTTTGCCTTCCTGGAGA-----------------TTCCCCA-GGTGTGGCATGTTAGCTGACTCTGACTCTGAGCGGGGG-TGCTGC-------CTTTTGCTTTAGGTTGGGCCTTTTACTGAGGAGATTTAAGTCCCCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTACCACCCAGAATGGGTCCCAGCAG----TGTTGG-----GAAAGTTCTCTCTGG---GGTTGGGGTACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCACACcc----------gtcc-ta---tatggttgctgctagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45393819 727 + 49145316 TAGGCCTCTTGTTCCCCTC---------CAGCTGGCTGCTGACCTGT-CAAGACTTCCTTCTCCTGCTGCCACGGC--ATGGGGGTTGTTCTGCCCTCTCTGGGGG----GTATTCTTTCTCTCCACTAGGGTACCAGTCTTTTCCATGGGGACACGCAGGGAGGGTGTCACCTCCCTAAGATGTTGATAGCCTTGTTTGGGGGTGTAGCCCATGAGACCTCTTCTTTCTCGAGGGTGGGAGCGCCTGCCCATGCCCCTCTGTTGAGTTCTTGGGATGGAAAGAGGGGGTG---TAAGCTCTGGTTCCACATTCTTGTT-CCCTTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGCTGTTGGACTTTGGTGAGGATCCTGGCAAACCTCAGGGTTGGTGTCCAGGCCCT---GGCCTCAT---AGCTCCCTGGATCACAGGGACTTGCCCCTCCTCAGTCTGAGTCCCCTCTGGGGCACTTTCTCCTGGGTCTTTCTGTTGGTTGCGTTGCCTT------AG-----------------CTTCCCT-TGTATGTTATGTTGGCTGA------CTCTAGGCGGGCGGTGCTGC-------TGTTTTCTTTAGGTGGGGCCTTTTACTGAGGAGATTTAAGTTCCCTGAAGTTTAAG--TTAGCA-------CTCCTACCTGCTACCA-CCAGAATAGGTCCCTGCGG----CGTTGG-----AGAACCCTCAGCAGGGCTGGTTACGGTGCCAGGCCTGT---CCTTT----ATGGGTCTCTT-TTCTAAAGCACCCTT----------GTCC--A---TAGGGTTGCTGCTAGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3648581 711 + 145441459 -tggcccTTTGTTGCCCCTGTTTTTGGGTGCCTTGCTTCTGGTCCCTTTAGAACTTCTGTCATttgttgttgttgttgttgt---------tgttgttgctgtG-GCTTATTGCTCTTGCTGCAAGCCTGTGTCACCGCTTCCTCTGTGT---------------------------TGCAGTCCCAGCCACTTTGT---GGAGCGTGG---ATAAGGCCTCACCTTACTTA-AGGTGGCAGTGCCTGCCCAGAACCCTCCTACAGGCTCTTGGGACAAAGTGA-GCAGTGTAATAAGCTCTTGTTTAACATTCTTTCCTTCCCTGCTATAAAAAGAGGCTTCTCTGTGCTGATGGATATTAGA-----GCCAAGACTC----------------TAGAGTCAAGATCCTGAATACCTCCTGCAGGGTCCCTAGATCAGGGGTACTTAGTCTACTTCAG------TCTCCTCTATGGGGCTCTTTGCTGAGTTCTTTTGATGGTTGCTTCATCTTCCTGGAAA-----------------TTGCCTGCTGTATGGTGTGTCAGCTAA------TCCTCTGTTGAGAGTGCTGTGTGCGTGCTCTCTCTTTTTGATAGATC-----CTAAAGATATTTAAGTCCCCAC-AGTTTGAG--GTGCCA-------CCCATAGCTACCTCCCCACAAAGTGGGACCCTACAG----AGTTAATTTTTTAAATCCCTTTTCAG---AG--AAGGCACTAGCCCCAT---CCACTGTAGGTAGGCCTCTTTTTCTGAATCTGCTCCCTAATGCAGTATCC-CATGCTATGATTAGTATAAGT i mm10.chr7 I 756 I 329 s canFam3.chr1 19610211 522 - 122678785 GAGGTCTCTTGTTCCCCTG--------GCACCATGCTTCTCACTCCTTCAGGACT------------TGCCACAGT--CTGC---------TCCCCTCTT--GG-G----GTAT----------------------------------------------------CACCTCCCCCCTGAGCTGTGG------------------------CATG---CATCCTCTCCCTCC-GGGCTG---------------------------------------------------------------------------------CCCCTG-GGCAGTAAGAGGCATTCCTGTGTTG--GG-------------------------------------------GTCCTGGCCCT---CTCC-----CAAGCTCCC-AGGCCAAAGGCTCTT---CCATTTCAGTTTGG-TCCTCTCTGTGCAACTGTCTGCTAGGTGCTTCTCTG-GCTGCCT--CCTTTTTGGAGGGATCTTGTGTGGGGATCTGGCCCC-ACTGTGGTGTGTCGGCTGG------CCTGGGGCCGAGGGTGGAGC-------CATCATC--TGGGTTGGCTCTTAT-----GGAGATGTATGCTCCCTCAAGTCTGAGCTGTGACATCCCTCTCCCCCGCTCTTCAGTGTCCAGAATGGGCTCTCGCGGAGGATGCTGG-----TGCAGACAGCCTTGG---GGCCTTGGTCCTTCTCCAGCATACTCTC----AT--GCCCTGTGCTTT----CATACGT----------GTTCTCA---TACGCTAGCCGTTAGC i canFam3.chr1 C 0 C 0 a score=462741.000000 s hg38.chr19_GL949747v2_alt 116311 157 + 729520 cacatgtg-gtgattagtaactagttaaaaatgaaaaattcagttcctccattacacttgccacatttcagatgttcagtggccaacagata-tgcgcaaatagagtgtttccagcattgc--aaagttctgttggatagcactgTTTGCCAGATGTTCCC s panTro4.chr19 59050296 157 + 63644993 cacatgtg-gtgattagtaactagttaaaaatgaaaaattcagtttctccattacacttgccacatttcagatgttcagtggccaacagata-tgcgcaaatagagtgtttccagcattgc--aaagttctgttggatagcactgTTTGCCAGATGTTCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55926543 157 + 60714840 cacatgtg-gtgattagtaactagttaaaaatgaaaaattcagttcctccattacacttgccacatttcagatgttcagtggccagcagata-tgtgcaaatagagtgtttccagcattgc--aaagttctgttggatagcactgTTTGCCAGATGTTCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102692230 157 - 106955855 caaatgtg-gtgattagtaactagctaaaaatgaaaaattcagttccttcattacacttgccacatttcagatgttcagtgtccaacagata-tgcgcaaatagagtgtttccagcattgc--aaagttctgttggatagcactgTTTGCCAGATGTTCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59980267 157 + 64156825 cacatgtg-gtgattaataactagttaaaaatgaaaaattcggttcctccattacacttgccatatttcagatgttcagtggccaACAGATA-AGCATAAATAGAGTGTTTCCAGCATTGC--AAAGTTCTGTTGGAGAGCACTGTTTGCCAGATGTTCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55004982 157 + 59248254 cacatgtg-gtgattaataactagttaaaaatgaaaaattcggttcctccattacacttgccatatttcagatgttcagtggccaacagata-agcataaatagagtgtttccagcattgc--aaagttctgttggagagcactgTTTGCCAGATGTTCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47111257 157 + 51301725 CACATGTG-GTGATTAATAActagttaaaaatgaaaaattcggTTCCTCCATTACACTTGCCATATTTCAGATGTTCAGTGGCCAACAGATA-AGCATAAATAGAGTGTTTCCAGCATTGC--AAAGTTCTGTTGGAGAGCACTGTTTGCCAGATGTTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46818448 154 + 50890351 cacatgtg-gtgattaataactagttaaaaatg-aaaattcggttcctccattacacttgccatatttcagatgttcagtggccaacagata-agcataa--agagtgtttccagcattgc--aaagttctgttggagagcactgTTTGCCAGATGTTCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45394546 155 + 49145316 CACATGCG-GTGATTAGTAACTGGTCAAAGATGAAAGATT---GTTCTCCGTTACACTTGCCACATTTCAGATGCTCAGGGGCTGACAGATAGTGCACATGGACAGTGTTTCCTGCGTTGC--AGAGTGGTGTTGCACAGCGCGGTTGGCCAGATGCTCCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19610733 134 - 122678785 ----TGTGTGTAATTGAAA------TAAAAATGCAAAGTTCTAGTTTTTCATAGT---------------GGTATTTAGAGAC--ATAGGTAGCATTTATAGGGAGCATTTCTGTCATCGTAGAAAGTGTTGTTGGATAGGGCTGTTGGTGAGGCAGTCCG i canFam3.chr1 C 0 C 0 e mm10.chr7 3649292 329 + 145441459 I a score=3495331.000000 s hg38.chr19_GL949747v2_alt 116468 1105 + 729520 TTCTT---TGTGGGTGAGGACTCTTTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTGTTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCAGGG----------TTCCC-TGCCCTGCACACGTAGAGTGGGAGCGGCCCGTGGATCCCAGGGAACTGTGCTTTTCATTGTAGGCCCCCTCCCTGGAGGGGAAGA----GGGCAATCTCCGCTGGTATCTCAGAAGTCTTCTTCTGAGGCATAAGCCTCTCTTCCCAGGGCTC---------CCCTGGTCTCGCTGTCAGGCCCTAAGGTATGTCTTCCCTTG------GACT-AAAGCTCCTTGGAACTCCCTTTTGACCTCAGTCTTCTCTGGGTTCCAGGTAACTTCCTTTAAAATAAAGACGCTCCTCTCTTGAAGTTTTGGGTTCCTGCCCTGAT-GGTCTATGTCTCCCTGACTCTAAATTACCAATCCACTTGCTATG-GGATTCCTCCATGAGTGCAGATCGGCTCCCTCACAGCTGCGGTACCTTTGCACCCTCTTA--TCTTAGTAAGATTTCTGTCTTCTCCCAGGTCTCTCTTGGGTACTGCCTTCTGCCCCCAAATCTCT--AAGCCTTCTTGGTATTAGCTTCTTTGGGTTAGGAGTGTTATTTCCTTTTGGTTTAAGGATCCTGCTCTGGAATAAATGTCTTGGTGGTTTGAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGCATGAGCGGGTTCAGCTCTTCACAGCTTTCGGCATCTCTGCTCGCCGTCGTTTTCCCCCACCCCCAATCTTTCTTCTCCTACCTACAGCTTacacacacacac-acacacacacacacacacacacacacGCCCTTCTCTGTGAGCTGCCAGTTTCATTTGTCTCCTGACTTGTCTGAGGGATGACCTCTC------------CTAGCCACCTCTGC--CCAGCCCCTCTGAGTAGGAAGTGTGATTTCCAGGGCTAATGCCTCCAT-CCCAGTCATC-AGCTGTGTGCAGCATGAC--TGTCCTGCTCTGAAAAACCTTTTTGAGTGTATTCTGGGGAGAAGGTACTCCATGCTCTAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA s panTro4.chr19 59050453 1086 + 63644993 TTCTT---TGTGGGTGAGGACTCTTTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTGTTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCAGGG----------TTCCC-TGCCCTGCACAAGTAGAGTGGGAGCGGCCCGTGGATCCCAGTGAACTGTGCTTTTCATTGTAGGCCCC-TCCCTGGAGGGGAAGA----GGGCAGTCTCCGCTGGTATCTCAGAAGTCTTCTTCTGAGGCCTAAGCCTCTCTTCCCAGGGCTC---------CCCTGGTCTCGCTGTCAGGCCCTAAGGTATGTCTTCCCTTG------GACT-AAAGCTCCTTGGAGCTCCCTTTTGACCTCAGTCTTCTCTGGGTTCCAGGTAACTTCCTTTAAAATAAAGACGCTCCTCTCTTAAAGTTTTGGATTCCTGCCCTGAT-GGTCTATGTCTCCCTGACTCTAAATTACCAATCCACTTGCTATG-GGATTCCTCCATGAGTGCAGATCGGCTCCCTCACAGCTGCGGTACCTTTGCACCCTCTTA--TCTTAGTAAGATTTCTATCTTCTCCCAGGTCTCTCTTGGGTACTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTATTAGCTTCTTTGGGTTAGGAGTGTTATTTCCTTTTGGTTTAAGGGTCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGTATGAGGGGGTTCAGCTCTTCATAGTTTTCGGCATCTCTGCTCGCCGTGGTTTTCCCCCACCCCCAATCTTTCTTCTCCTACCTACAGCTTACACACACACAC-ACACAC--------------------GCCCTTCTCTGTGAGCTGCCAGTTTCATTTGTCTCCTGACTTGTCTGAGGGATGACCTCTC------------CTAGCCACCTCTGTGGCCAGCCCCTCTGAGTAGGAAGTGTGATCTCCAGGGCTAATGCCTCCAT-CCCAGTCATC-AGCTGTGTGCAGCATGAC--TGTCCTGCTCTGAAAAACCTTTTTGAGTGTATTCTGGGGAGAAGGTACTCCATGCTCTAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55926700 1100 + 60714840 TTCCT---TCTGGGTGAGAACCCTTTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTGGTCCTCAGTATGGGGCTGTTTCTGTCTTTAAAGTAAGTGACTACTCCAGGG----------TGCCC-TGCCCTGCACAAGTAGAGTGGGAGCGGCCCCTGGATCCCAGGGAACTGTGCTTTTCATTGTAGGCCCCCTCCCTGGAGGGGAAGA----CGGCAATCTCCGCTGGTATCTCAGAAGTCTTCTTCTGAGGCATAAGCCTCTCTCCCCAGGGCTC---------CCCTGGTCTCGCTGTCAGGCCCTAAGATGTGTCTTCCCTTG------GACT-AAAGCTCCTTGGAACTCCCTTTTGACCTCAGTCTTTTCTGGGTTCCAGGTAACTTCCTTTAAAATAAAGACGCTCCTCTCTTTAAGTTTTGGATTACTGCCCTGAT-GGTACATGTTTCCCTGACTCTAAGTTACCAATCCACTTGATATG-GGATTCCTTCGTGTGTGCAGATCGGCTCCCTCACAGCTGCGGTACCTTTGCACCCTCTTA--TCTTAGTAAGATTTCTGTCTTCTCCGAGGTCTCTCTTGGATACTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTGTCAGCTTCTTTGAGTTAGGAGTGTTATTTCCTTTGGGTTTAAGGATCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGTATGAGTGGGTTCAGCTCTTCATAGTTTTCGGCATCTCTGCTCGCCGTCGTTTTCCCCCACCCCCAATCTTTCTT---CTACCTACAGCTTacgcacacacac-acacac----acacacacacacacaTGCCCTTCTCTGTGAGCTGCCAGTTTCATTTGTCTCCTGACTTGTCTGAGGGATGACCTCTC------------CTAGCCACCTCTGTGCCCAGCCCCTCTGAGTAGAAAGTATGATCTCCAGGGCTAATGCCTCCAT-CCCAGTCATC-AGCTGTGTGCAACATGAC--TGTCCTGCTCTGAAAAACCTTTTTGAGTGTAATCTGGGGAGAAGGTACTCCATGCTCTAGGAATTTTCCACTTTCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102692387 1075 - 106955855 TTCCT---TGTGGGTGAGGACCCTCTTGGTGTGACTTCCCTCTGTACTGAGGCTCTTAGTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCAGGG----------TGCCC-TGCCCTGCACAAGAAGAGTGGGAGCAGCCCCTGGATCCCAGGGAACTGTGCTTTTCATTGTAGGCCCCCTCCCTGGAGGGGAAGA----GGGCAATCTCCGCTGGTATCTCAGAAGTCTTCTTCTGAGGCATAAGCCTCTCTCCCCAGGGCTC---------GCCTGGTCTCGCTGTCAGGCCCTAAGGTGTGTCTTCCCCTG------GACT-AAAGCTCCTTGGAACTCCCTTTTGACCTCAGTCTTCTCTGGGTTCCAGGTAACTTCCTTTAAAATAAAGACGCTCCTCT----AAGTTTTGGATTCCTGCCCTGAT-GTTATATGTTTCCCTGACTCTAAATTACCAATCCACTTGATATG-GGATTCCTTCGTGTGTGCAGATCGGCTCCCTCACAGCTGTGGTACCTTTGCACCCTCTTA--TCTTAGTAAGATTTCTGTCTTCTCCCAGG--TCTCTTGGGTACTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTATCAGCTTCTTTGGGTTAGGAGTGTTATTTCCTTTTGGTTTAAGGATCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATGCA--CCCAT-CTGTATGAGTGGGTTCAGCTCTTCATAGTTTTCGGCATCTCTGCTCGCCGTCGTTTTCCCCCACCCCCAATCTTTCTTCTCCTGCTTACAGCTTACACACACACAC---------------------------ACCCTTCTCTGTGAGCTGCCAGTTTCATTTGTCTCCTGACTTGTCTGAGGGATGACCTCTC------------CTAGCCATCTCTGTGCCCAGCCCCTCTGAGTAGGAAGTGTGATCTCCAGGGCTAATGCCTCCAT-CCCAGTCATC-AGCTGTGTGCAGCATGACTTTGTCCTGCTCTGAAAAACCTTTTTGAGTGTAATCTGGGGAGAAGGTACTCCATGCTCTAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59980424 1094 + 64156825 TTCCT---TGTGGGTGAGGACCCTCTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTAGTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCCGGG----------TGCCC-TGCCCTGCACAAGTAGAGTGGGAGCGGCCCCTGGATCCCAGGGAACTGTGCTTTTCATTACAGGCCCCCTCCCTGGAGGGGAAGA----GGGCAATCTCCACTGGTATCTCAATAGTCTTCT----GAGCATAAGCCTCTCTCCCCAGGGCTC---------CCC-GGTCTCGCTGTCAGGCCCTAAGATGTGTCTTCCCTTG------GACT-CAAGTTCCTTGGAACTCCCTTTTGACCTCAGTCTTCTCTGGGTTCCATGTAATTTCCTTTAAAATAAAGATGCTTCTCTCTTTAAGTTTTGGGTTCCTGCCCTGAT-GGTGCCTGTTTCCCTGAGTCTAAATTACCAATCCACTTGATATG-GGATTCCTTCGTGTGTGCAGATTGGCTCCC-CACAGCTGTGGTACCTTTGCACCCTCTTATCTCTTAGTAAGATTTCTGTCTTCTCCCAGGTCTCTCTTGGGTGCTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTGTCAGTTTCTTTGGGTTAGGAGTGTTATTTCCTTTTGGTTTAAGGATCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGTCTGAGTGGGTTCAGCTCTTCATAGTTTTCGGCATCTCTGCTCGCCGTCATTTTCCCCCACCCCCAATCTTTCTTCTCTCACCTACAGCTTacacacacacacaacacac------------acacacaTGCCCTTCTCTGTGAGCTGCCAGTTTCGCTTGTCTGCTGGCTTGTCTGAGGGATGACCTCTT------------CTAGCCACCTCTGTACCCAGCCCCTCTGAGTAGGAAGTGTGATCTCCAGGGCTAATGCCTTCAT-CCCAGTCATC-AGCTGTGTGCAGCATGACTTTGTCCTGCTCTGAAAAATCTTTTTGAGTGTAATCTGGGGAGAAGGTACTCCATGCTACAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55005139 1094 + 59248254 TTCCT---TGTGGGTGAGGACCCTCTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTAGTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCCGGG----------TGCCC-TGCCCTGCACAAGTAGAGTGGGAGCGGCCCCTGGATCCCAGGGAACTGTGCTTTTCATTACAGGCCCCCTCCCTGGAGGGGAAGA----GGGCAATCTCCACTGGTATCTCAATAGTCTTCT----GAGCATAAGCCTCTCTCCCCAGGGCTC---------CCC-GGTCTCGCTGTCAGGCCCTAAGATGTGTCTTCCCTTG------GACT-CAAGTTCCTTGGAACTCCCTTTTGACCTCAGTCTTCTCTGGGTTCCATGTAATTTCCTTTAAAATAAAGATGCTTCTCTCTTTAAGTTTTGGGTTCCTGCCCTGAT-GGTGCCTGTTTCCCTGAGTCTAAATTACCAATCCACTTGATATG-GGATTCCTTCGTGTGTGCAGATTGGCTCCC-CACAGCTGTGGTACCTTTGCACCCTCTTATCTCTTAGTAAGATTTCTGTCTTCTCCCAGGTCTCTCTTGGGTGCTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTGTCAGTTTCTTTGGGTTAGGAGTGTTATTTCCTTTTGGTTTAAGGATCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGTCTGAGTGGGTTCAGCTCTTCATAGTTTTCGGCATCTCTGCTCGCCGTCATTTTCCCCCACCCCCAATCTTTCTTCTCTCACCTACAGCTTacacacacacacaacacac------------acacacaTGCCCTTCTCTGTGAGCTGCCAGTTTCGCTTGTCTGCTGGCTTGTCTGAGGGATGACCTCTT------------CTAGCCACCTCTGTACCCAGCCCCTCTGAGTAGGAAGTGTGATCTGCAGGGCTAATGCCTTCAT-CCCAGTCATC-AGCTGTGTGCAGCATGACTTTGTCCTGCTCTGAAAAATCTTTTTGAGTGTAATCTGGGGAGAAGGTACTCCATGCTACAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47111414 1093 + 51301725 TTCCT---TGTGGGTGAGGACCCTCTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTAGTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCCGGG----------TGCCC-TGCCCTGCACAAGTAGAGTGGGAGCGGCCCCTGGATCCCAGGGAACTGTGCTGTTCATTATAGGCCCCCTCCCTGGAGGGGAAGA----GGGCAATCTCCACTGGTATCTCAGAAGTCTTCT----GAGCATAAACCTCTCTCCCCAGGGCTC---------CCCTGGTCTCGCTGTCAGGCCCTAAGATGTGTCTTCCCTTG------GACT-CAAGTTCCTTGGAACTCCCTTTTGACCTCAGTCTTCTCTAGGTTCCatgtaatttcctttaaaataaagatgCTCCTCTTTTTAAGTTTTGGGTTCCTGCCCTGAT-GGTGCCTGTTTCCCTGAGTCTAAATCACCAATCCACTTGATATG-GGATTCCTTCGTGTGTGCAGATTGGCTCCC-CACAACTGTGGTACCTTTGCACCCTCTTA--TCTTAGTAAGATTTCTGTCTTCTCCCAGTTCTCTCTTGGGTGCTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTGTCAGTTTCTTTGGGTTAGGAGTATTATTTCCTTTTGGTTTAAGGATCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGTCTGAGTGGGTTCAGCTCTTCATAGTTTTCGGCATCTCTGCTTGCCGTcattttcccccacccccaatcttTCTTCTCTCACCTAcagcttacacacacacacaacacac------------acgcacacgcccTTCTCTGTGAGCTGCCAGTTTCGCTTGTCTGCTGGCTTGTCTGAGGGATGACCTCTT------------CTAGCCACCTCTGTACCCAGCCCCTCTGAGTAGGAAGTGTGATCTGCAGGGCTAATGCCTTCAT-CCCAGTCATC-AGCTGTGTGCAGCATGACTTTGTCCTGCTCTGAAAAATCTTTTTGAGTGTAATCTGGGGAGAAGGTACTCCATGCTACAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46818602 1096 + 50890351 TTCCT---TGTGGGTGAGGACCCTCTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTAGTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCCGGGTGCCCTGCCCTGCCC-TGCCCTGCACAAGTAGTGTGGGAGCGGCCCCTGGATCCCAGGGAACTGTGCTTTTCATTATAGG-CCCCTCCCTGGA-GGGAAGA----GGGCAATCTCCACTGGTATCTCAGAAGTCTTCT----GAGCATAAGCCTCTCTCCCCAGGGCTC---------CCCGGGTCTCGCTGTCAGGCCCTAAGATGTGTCTTCCCTTG------GACT-CAAGCTCCTTGGAACTCCCTTTTGACCTCGGTCTTCTCTGGGTTCCATGTAATTTCCTTTAAAATAAAGACGCTCCTCTCTTTAAGTTTTGGGTTCCTGCCCTGAT-GGTGCATGTTTCCCTGAGTCTAAATGACCAATCCACTTGATACG-GGATTCCTTCGTGTGTGCAGATTGGCTCCC-CACAGCTGTGGTACCTTTGCACCC-------TCTTAGTAAGATTTCTGTCTTCTCCCAGGTCTCTCTTGGGTGCTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTGTCAGTTTCTTTGGGTTAGGAGTGTTATTTCCTTTTGGTTTAAGGATCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGTCTGAGTGGGCTCAGCTCTTCATAGTTTTCGGCATCTCTGCTCGCCGTCATTTTCCCCCACCCCCAATCTTTCTTCTCTCACCTACAGCTTacacacacacacaacacac------------acgcacacGCCCTTCTCTGTGAGCTGCCAGTTTCGCTTGTCTGCTGGCTTGTCTGAGGCATGACCTCTT------------CTAGCCACCTCTGTACCCAGCCCCTCTGAGTAGGAAGTGTGATCTGCAGGGCTAATGCCTTCAT-CCCAGTCATC-AGCTGTGTGCAGCATGACTTTGTCCTGCTCTGAAAAATCTTTTTGAGTGTGATCTGGGGAGAAGGTACTCCATGCTACAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45394701 1049 + 49145316 TTCC----GGTGGGTGAGGACCCTCTTGGTGTGACTTTTCTCTGTATTGAGGCTCTTATTCCTCAGTATGGGGCTGTTTCTGCCTTTACGTTAATTGACTACT-CAGGG----------TGCCCTTGCCCTGCACTAGTAGAATGGGCACAGCCCCTGGATCTCAGGGAACTATGCTTTTCATGATAGGCCCCCTCCCTGG--GGGAAGA----GAGGAACCTCCGCTGGTGGCTCAGATGTCCTCT----TAGCATAAGCCTCTCTCTCCAGGGC------------------------------CCCTAAGGTGTGTCTTCCCCTA------GACTAAAAGCTCCTTGTGACTCCCTTTTGACCTCAGTCTCCTCTGGGTTCTATGGAACTTCCTTTAGAATAAAGATGCTCCTCTCTTTAAGTTTTGGGCTCCTGCCGTGAT-GGTGTATGTTTTCCTGGGTCTCTATCACCAATCCACTTGATACG-GGATTACTTCGTGTGTGCAGACCGGCTCCCTCACAGCTGCGGTACTTTTTCAGCCTC--A--TCTTGGTCAGATTTCTCTCTTCTCTCAGGTCTGTCTTGGGTACTGCCTTCTGCCCCCAAATCTCT-----CATCCTTGGTATCAGCCTCTTTGGGTTAGGAGTGTTATTACCTTTTGGCTTAAGGATTCTGTTCTGGAATACATTTCTTGGTAGTTTAAGTCA--CTTCTACTTGGCATTCAGCGCTGT-CTGTATCAGTGGGTTCAGGTCTTCAGAGTTTTAGGCACCTCTGGTCTTCACTG-TTTCCCCCACCCCCAGCCTTCCTTCCCTCACCTACAGCTTACAGACACACAC---------------------------GCCCTTCTCTGTGAGCTGCCAGTTTCATTTGCCTCCTGACTTGTCTGAGGGGTGGCCTCTC------------CTGGCCACCTCTGTCCCCAGCCCCTCTGAGTAGGACGTGTGATCTCCAGGGCTAATGCCTTCAT-CCCAGTCATC-AGCTGTGTGCTGCGTGACTTCGCTCTGCTCTG-AAAACCCTTTTGAGTGTAGTCTGGGGAGAAGGTGCTCCATGCTCTAGGAATTTTCCGCTTCCTGGGTC-AGAGGCACACAACGAAGTGTGTATCTTTTCTTGTTTCAACA i calJac3.chr22 C 0 C 0 s mm10.chr7 3649621 914 + 145441459 TCCCT---TGATGTTAAGGACCCTC--AATCTGGCTACCCTCCAGGTTGAAACCCTTGGTTCTGGTAGTGGAG------CTGCCTTTATAGTTAGGAGCTATATTGGGG----------CACTCTTGCCTTGTATCAG----------------CCTAGTTCT--GAGAGCCTTGCTTGATATTGCA-------CCCATGGGGGAGAAGGTTACATACAACTTGTGCTAGGAACTCATAAACCCTCT----TAG----GGTCTTCCTCTCCAGGATGC---------CCT--GTTTCGGGGTCAACTTTTGTAGTGTGGATTTCCCTGCCAACCGACC-TCCTCTCCTCAG-----TCCTTTGTCCTCAGGCCCTTCTGAATTAAACTCTGCTTCCTTCAGAATAAAAATAGGTGTCT---------TTGA----CCTCCCTGATGGGTTCATGTTT--CTGAGTCTAAATTGCCAGTCTATCTGATGTG-GAACTCCTCCATGTGTGCAGATCTGTTCACTCATAGCTAAGGTTCTT------CTCTTTA--TCTTTTTGAGATTTCTATCTTCTCATCGCCCTC-CTTGAGTGCTGCTTCCTGCTTCCAAGTTTCTATAGCCATTTTTAGTGTC---------------------------------------GGGCTTCTGCTGTGGAATAAATTTCTCGAAAGTGTAAGACC--CTCTTGTTTGATATCCTGCCTTGTCCTGTATGAATGGGCCTTGATCTTCATA-------------------------------------------TCTCTCTTCC----CCTTCAGCTCACAC-CTCTTAG------------------------------CCTTTCCAGGAGCTGCCAGCCTCATGTATTCTGTGACTTACCT--AGAGTGGCCTCTC------------TCAGTCACCTCTGCTCTCAGCCCCTCAGTTTAGAAAGTACCATTTCTAGGGCTAATGCTTCCAT-CCCAGCAGTCTACCTGTGTGCTGCTTG---------TGCTCT--------------AGTGTCATCTAGAGTGCAGATATTCTGTATTTTAGAAAATTTCTACTTCCTAAGTCAAGAGGCCCACCAATAAG-ATATACTGTTCTTTGTTTCAACA i mm10.chr7 I 329 I 117 s canFam3.chr1 19610867 844 - 122678785 -TCCTGGCTGTGGGTAAGGCCGCTCTTGGGCTTCCTGCCCT-----------------------------------------------------------------GGG----------CTCCC-TGCCCTGGGCCTG----------------------TCTCAGCCA------CACTTCAGGAGAGACCCCCTCTCTGGG------------GAGTGACCTC---------------------------TGGCATAACACTC---CTGCAAGGCTCGTGGATCCTCCCTGATCCTGGTGTC-GACCCTAAGTTGTGGCTT-CCTTG------GGCC-AGAGCTCCTGGTGGCTCCCCTTTGACCTCAGCGTCCTTTGGGTTGCATAGA----CTGTTAGGGTGAAGATGCCCCTCTCTCCTGGTCCTGG----CTG------T-GTTACCTGT--------------GTTACCACCACATCTGATACGTTAACTCCTTCGAGTGCACAGAT-GGCTCTCTCATAGCTGTGGTCCCCTTCCACCTTCCTG------------------------------GCCCTCCGGGGGTGATGCTTTCTACTCCCATGTGTCT--AAA---TCTTGGTATCGGTGTCTTTGGGTTGGG-----CCGTCTCTTGTGTTTTAAGGATTCTGTTCTGGAATGAA---CTTGGTGGTGTAAGGCCCTCTTCTGTTTGGGACCCAGTCCTGT-CACGACGGGTGGGTTTAGCTGTTCCTGATTCCAGGTATTTC---------CCATCTCCCGCTGCTCCCCCTCCTTCC-------CCTGCAGTTCTCACA---GCAT-CTGAAC---------------------TTTCTCCCTGAAAACTGTC--------------TCTGACCTGTCTGAGGGCTAACCTCCCCGAGTTAGGAGTCTAGACACCTGTGTGCCCTGCCCCTCTGTG-------------------------GGCCTTCATCCCCAGCACTC-AGCCATGGGCTGCTTGACT---TCTTGCTCTAAAATGTC--------TGTCATCTGGTGAGAAAGTATCCCGTGCTCTGGGTACTTCCCACTTCCTGGGTC-GGAGGTACACGAA-AAGTACATTTGTTTCCTTGTTTCAGCA i canFam3.chr1 C 0 C 0 a score=206362.000000 s hg38.chr19_GL949747v2_alt 117573 64 + 729520 AACTTATGGGGTCCCCTGTTGGCCAGACAC-TATGCTGGGCAGTCAAGCGAGCATCAGGAGAACT s panTro4.chr19 59051539 64 + 63644993 AACTTATGGGGTCCCCTGTTGGCCAGACAC-TATGCTGGGCAGTCAAGCGAGCATCAGGAGAACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55927800 64 + 60714840 AACTTATAGGGTCCCCTGTTGGCCAGACAC-TATGCTGGGCAGTCAAGCGAGCCTCAGGAGAACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102693462 64 - 106955855 AACTTACAGGGTCCCCTGTTGGCCAGACAC-CATGCTGGGCAGTCAAGCGAGCATCAGGAGAACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59981518 64 + 64156825 AACTTATGGGATCCTCTGTTGGCCAGACAC-TGTGCTGGGCAGTCAAGTGAGCATCAGTAGAACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55006233 64 + 59248254 AACTTATGGGATCCTCTGTTGGCCAGACAC-TGTGCTGGGCAGTCAAGTGAGCATCAGGAGAACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47112507 64 + 51301725 AACTTATGGGATCCTCTGTTGGCCAGACAC-TATGCTGGGCAGTCAAGTGAGCATCAGGAGAACT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46819698 64 + 50890351 AACTTATGGGATCCTCTGTTGGCCAGACAC-TATGCTGGGCAGTCAAGTGAGCATCAGGAGAACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45395750 65 + 49145316 AACTTCTAGGGTCTCTTGTTGGCCAGACACTTATGCTGGGCAGTCACACGAGCATCAGGAGAACT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19611711 57 - 122678785 AACTTCCAGAG--------TGTTCAGACCCCTGCAGTGGGCTGTCAGGGCAGCATAAGTAGAACT i canFam3.chr1 C 0 C 0 e mm10.chr7 3650535 117 + 145441459 I a score=10173211.000000 s hg38.chr19_GL949747v2_alt 117637 2801 + 729520 GGGGCTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTCTCTTTACCAGTCCCACCTACCTCACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCAGGGAATACGTGTTAATTCCTCTCCAATCTCTCCTAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTTCCTGCTGCACCTGTAGCCACATGCTCCCTCTTCTGAGGACTGCTCTTTAGATACCTGCCACCTGGGCAGGATTCTCACAGCCTTGTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATA--ATCTGGGTCTTCAGAGAGGAGGGCACAGGAAGGCGGCTCAGGACCTCTGGGTGTTGACCAGC--GGGAGGGGCTACATA-TGCAGATGCTGAGGACCTAAGAGAATCAGCTCTAAGATGGATTGGGGGTAGGGGTTGGGGGGGGTCCTCGAGTCCCTAGC---ATAAGGAA--GAATCACTGGA--------------GTGGGTACTGGGACATCCCCTCCCACACTGACTTCTCAATTCTCTCCATCCCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGGGGCCTGGACGCCTTTGTCctgagggtagagggaactgggagagtggactgctgggtcccagggagaaggagctgtggg------------ccccagttcctgggtcctgagg---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAAATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCCAGAGCCTGAGTCCCAGAGAGGTGGGAAGGTCACCAGATTCTTGAGATCCCAAG-GGGCGGAGGCAGAGCGGCCAGACCCCAGAG-GTCCTCAAGAGAAGTAAGGTTTCTGCACCTAAGGGAAGTGAAGAGGCAGCGGACTCAGAGCTCAGAAAGTAGGGTCACGAGGCTCAGGTCGGAGTGTCTGCTGGCCCTTAGTCAGCTCCTTTCCCACCTTTGAGAGCCCCCCTGCCAACTG-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGCAAAGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAGGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGTAGAGAAGAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGC-GGAACCCTAGCTGATGGGCTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCGA-CACCTTTGGGATGGGGATGGGCATGGGAATGGGCTGGCCAGCAGGAG--GCCAGTCATTT--ATGCTCCTGGGAGTTGGGGCCTGGATTCCTCAGGCGGACA-GGGCCAACAGCCGGGATTAGGGATTTGAGAGACAGGATTGGGAGGGCTTAGCAGCTGCACGC---GTGGGGCAGGAAGGAGGTCAGACAGAATCTCAGGGTCCCCTGGGTGTCTGGGTAGACCGTGGGGCCTTTGTGAAGAGGAGCGACTTGGGGGAAGGTGAGTGCAGGTTGAGCTTGGGCCACAGAGTAAAAGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCACCCAGAGGG--CCCTGGTCCTAGGGAGAGCACAGTGGGTAGAGACAAGGCAGAACATGGAGAAGGCAGAGAACCAGGC-CTGAAGGAAGACAGGA----GTCTGGGACAAAGCTGGATGTTGGGGTCCCAGGTTCTAAA-A-TCCGGGATTGT-GGGGTATGAGTTCAAAGGGATAC---------------AAACTGTACAGACTTGCTGAAACCAGAAAGACAGGGAGGGGAGAGCCGGGTCCTCAGGGAAGCTGTGGGTGGGAGAGGGTCAGGAAGTGGAAGATGACAGGGTTGGGTGTCAGACTCTGAGGGGTTTGGGAACCAGGGGCTT-TCGGGGAGATGATGGGTCCTTGAACAGAGCAGAG----ATTTGGAACCAAGGCTAAGATGTTAAATCCTAAAGGGGCCTTGA-----GGGGAGGGCAGGAGCGAGGCTTAGGAATCTGGGCTCTCTCAGGGATAAATGGGTAGGGTT--GGGGGCCTAGTGATGACAGAT---ATCACAATTCTAAACAGCAAGCTCCTCACAAATGGG------GGTTATCATTGTTACTGCTGGAGCAGGTCGG---AGGGTATCTGTATGCCAGAGGCAGTCACAG-TGGTGGGCGGGCT-CAGTTGAGAAATCTGGGCT----------GTCAGGTGAGGTGCAGATGGAGGCCAAGTCGTGGGATGGCACAAGGACCTCT-GGGTCTTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAAGGTGTGGGGAGAGGAGG-----GAGCAGTGGGATCCCAAGATGTC--AAGGCTAAGATTGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCCACCCC-GAAGGGGATGGCGTGGAGG---CT-TTGGGTCTCCACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGCTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC s panTro4.chr19 59051603 2800 + 63644993 GGGGCTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTCTCTTTACCAGTCCCACCTACCTCACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCAGGGAATACGTGTTAATTCCTCTCCAATCTCTCCTAGCAGCGTCAGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTTCCTGCTGCACCTGTAGCCACATGCTCCCTCTTCTGAGAACTGCTCTTTAGATACCTGCCGCCTGGGCAGGATTCTCACAGCCTTGTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATA--ATCTGGGTCTTCAGAGAGGAGGGCACAGGAAGGCGGCTCAGGACCTCTGGGTGTTGACCAGC--GGGAGGGGCTACATA-TGCAGATGCTGAGGACCTAAGAGAATCAGCTCTAAGATGGATTGGGAGTAGGGGTTGGGGGGG-TCCTCGAGTCCCTAGC---ATAAGGAA--GAATCACTGGA--------------GTGGGTACTGGGACATCCCCTCCCACACTGACTTCTCAATTCTCTCCATCCCTCAGCTCCACAATGCAGCCAACGCAAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGGGGCCTGGACGCCTTTGTCctgagggtagagggaactgggagagtggactgctgggtcccagggagaaggagctgtggg------------ccccagtttccgggtcctgagg---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCCAGAGCCTGAGTCCCAGAGAGGTGGGAAGGTCACCGGATTCTTGAGATCCCAAG-GGGCGGAGGCAGAGCGGCCAGACCCCAGAG-GTCCTCAAGAGAAGTAAGGTTTCTGCACCTAAGGGAAGTGAAGAGGCAGCGGACTCAGAGCTCAGAAAGTAGGGTCACGAGGCTCAGGTCTGAGTGTCTGCTGGCCCTTAGTCAGCTCCTTTCCCACCTTTGAGAGCCCCCCTGCCAACTG-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGCAAGGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAGGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGTAGAGAAGAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGC-GGAACCCTAGCTGATGGGCTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCGA-CACCTTTGGGATGGGGATGGGCATGGGAATGGGCTGGCCAGCAGGAG--GCCAGTCATTT--AGGCTCCTGGGAGTTGGGGCCTGGATTCCTCAGGCGGACA-GGGCCAACAGCCGGGATTAGGGATTTGAGAGACAGGATTGGGAGGGCTTGGCAGCTGCACGC---GTGGGGCAGGGAGGAGGTCAGACAGAATCTCAGGGTCCCCTGGGTGTCTGGGTAGACAGTGGGGCCTTCGTGAAGAGGAGCGACTTGGGGGAAGGTGAGTGCAGGTTGAGCTTGGGCCACAGAGTAAAAGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCACCCAGAGGG--CCCTGGTCCTAGGGAGAGCACAGTGGGTAGAGACAAGGCAGAACATGGAGAAGGCAGAGAACCAGGC-CTGAAGGAAGACAGGA----GTCTGGGACAAAGCTGGATGTTGGGGTCCCAGGTTCTAAA-A-TCCAGGATTGT-GGGGTATGAGTTCAAAGGGATAC---------------AAACTGTACAGACTTGCTGAAACCAGAAAGACAGGGAGGGGAGAGCCGGGTCCTCAGGGAAGCTGTGGGTGGGAGAGGGTCAGGAAGTGGAAGATGACAGGGTCGGGTGTCAGACTCTGAGGGGTTTGGGAACCAGGGGCTT-TCGGGGAGATGATGGGTCCTTGAACAGAGCAGAG----ATTTGGAACCAAGGCTAAGATGTTAAATCCTAAAGGGGCCTTGA-----GGGGAGGGCAGGAGCGAGGCTTAGGAATCTGGGCTCTCTCAGGGATAAATGGGTAGGGTT--GGGGGTCTAGTGATGACAGAT---ATCACGATTCTAAACAGCAAGCTCCTCACAAATGGG------GATTATCATTGTTACTGCTGGAGCAGGTCGG---AGGGTATCTGTATGCCAGAGGCAGTCACAG-CGGTGGGCGGGCT-CAGTTGAGAAATCTGGGCT----------GTTAGGTGAGGTGCAGATGGAGGCCAAGTCGTGGGATGGCACAAGGACCTCT-GGGTCTTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAAGGTGTGGGGAGAGGAGG-----GAGCAGTGGGATCCCAAGATGTC--AAGGCTAAGATTGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCCACCCC-GAAGGGGATGGCGTGGAGG---CT-TTGGGTCTCCACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGCTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55927864 2787 + 60714840 GGGGCTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTCCCTTTACCAGTCCCACCTACCTCACTATGCTGACTAGGTCCGT-ATCTCTGGGTTTTTACCAGCCAGGGAATATGTGTTAATTCCTCTCCAATCTCTCCTAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGTGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGA-TGACTTCCTGCTGCACCTGTAGCCACGTGCTCCCTCTTCTGAGGACTGCTCTTTAGATACCTGCCGCCTGGGCAGGATTCTCACAGCCTTGTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATA--ATCTGGGTCTTCAGAGAGGAGAGCACAGGAAGGTGGCTCAGGACCTCTGGGTGTTGACCAGC--AGGAGGGGCTACATA-TGCAGATGCTGAGGACCTAAGAGAATCAGCTCTAAGATGGATTGGGGGTAGGGGTTGGGGGGGTTCCTCCAGTCCCTAGC---ATAAGGAA--GAGTCACTGGA--------------GTGGGTGCTGGGACATCCCCTCCCACACTGACTTCTCAATTCTCTCCATCCCTCAGCTCCACAATGCAGCCAATGCGAACCAGAAAGAAAAGTATGAGGCTGACCTGAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGggg---------------cctgagggtagagggaactcggagagtggactgctgggtcccagggagaaggagctgtggg------------ccccagttcctgggtcctgagg---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCCAGAGCCTGAGTCCCAGAGAGGTGGGGAGGTCACCAGATTCTTGAGATCCCAAG-GGGTGGAGGCAGAATGGCCAGACCCCAGAG-TTCCTCAAGAGAAGTAAGGTTTCTGTACCTAAGGGAAGGGAAGAGACAGCGGACTCAGAGCTCAGAAAGTAGGGTCACGAGGCTCAGGTCTGAGTGTCTGCTGGCCCTTAGTCAGCTCCTTTCCCACCTTTGAGAGCCCCCCTGCCAACTG-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGCAAGGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAGGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGTAGAGAACAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGCGGGAACCCTGGCTGATGGGCTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCGA-CACCTTTGGGATGGGGATGGGCATGGGAATGGGCTGGCCAGCCGGAG--GCCAGTCATTT--AGGCTCCTGGGAGTTGGGGCCCGGATTCCTCAGGCGGACA-GGGCCAAGAGCCGGGATTAGGGATTTGAGAG--AGGATTGGGAGGGCTTAGCAGCTGCCTGG---GTGGGGCAGGAAGGAGGTCAGACAGAATCTCAGGGTCCCCTGGGTGTCTGGGTAGACAGTGGGGCCTTCATGAAGAGGAGCGATTTGGGGGAAGGTGAGTGCAGGTTGAGCTTGGACCACAGAGTAACAGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCACCCAGAGGG--CCCTGGTCCTAGGGAGAGCACAGTGGGTAGAGACAAGGCAGAACATGGAGAAGGCAGAGAACCAGGC-CTGAAGGAAGAGAGGA----GTCTGGGACAAAGCTGGATGTTGGGGTCCCAGGTTCTAAA-A-TCCGGGATTGT-GGGGTATGAGTTCAAAGGGATAC---------------AAACTGTACGGACTTGTCGAAACCAGAAAGACAGGGAGGGGAGAGACGGGTCCTCAGGGAAGCTGTGGGTGGGAGAGTGTCAGGAAGTGGAAGATGACAGGGTCAGGTGTCAGACCCTGAGGGGTTTGCGAACCAGGGGCTT-TCGGGGAGATGATGGGTCCTTGAACAGAGCAGGG----ATTTGGAACCGAGGCTAAGATGTTAAATCCTAAAGGGGCCTTGA-----GGGGAGGGCAGAAGCGAGGCTTATGAATCTGGGCTCCCTCAGGGATAAATGGGTACGGTTG-GGGGGCCTAGTGATGACAAATATCATCACGATTCTAAACAGCAAGCTCCTCACGAATGGG------GGTTATCATTGTTACTGCTGGAGCAAGTCGG---AGGGGATCTGTATGCCAGAGGCAGTCACAG-TGGTGGGCGGGCT-CAGTTGAGAAATCTGGGCT----------GTCAGGTGAGGTGCAGATGGAGGCCAAGTCGTGGGATGGCACAAGGACCTCT-GGGTCTTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAAGGTGTGGGGAGAGGAGG-----GAGCAGTGGGATCCCAAGATGTC--AAGGCTAAGATTGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCAT-CTGCCCCACCCC-GAAGGGGCTGGCGTGGAGG---CT-TTGGGTCTCCACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGCTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102693526 2803 - 106955855 GGGTCTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTCCCCTTACCAGTCCCACCTACCTCACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCGGGGAATACGTGTTAATTCCTCTCCAATCTCTCCTAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTTCCTGCTGCACCTGTAGCCATGTGCTCCCTCCTCTGAGGACTGCTCTTTAGATACCTGCCGCCTGGGCAGGATTCTCACAGCCTTGTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATA--ATCTGGGTCTTCAGAGAGCAGGGCACAGGAAGGCGGCTCAGGACCTCTGGGTGTTGACCAGG--GGGAGGGGCTACATA-TGCAGATGCTGAGGACCTAAGAGAATCAGCTCTAAGATGGATTGGGGGTAGGGGTTGGGGGG--TCCTTGAGTCCCTAGC---ATAAGGAA--GAATCACTGGA--------------GTGGGTACTGGGACATCCCCTCCCACACTGACTTCTCAATTCTCTCCAT-CCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGGGGCCTGGACGCCTTTGTCCTGAGGGTAGAGGGAACTGGGAGAGTGGACTGCTGGGTCCCAGGGAGAAGGAGCTGTGGG------------CCCCAGTTCCCGGGTCCTGAGG---TCTGACTTTCTTGTTTTT-CCCATCTGCAGCGGCTAAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCCAGAGCCTGAGTCCCAGAGAGGTAGGGAGGTCACCAGATTTTTGAGATCCCAAG-GGGTGGAGGCAGAGCGGCCAGACCCCAGAG-TTCCTCAAGAGAAGTAAGGTCTCTGCACCTAAGGGAAGGGAAGAGGCAGCGGACTCAGAGCTCAGAAAGTAGGGTCACGAGGCTCGGGTCCGAGTGTCTGCTGGCCCTTAGTCAGCTCCTTTCCCACCTTTGAGAGCCCCCCTGCCAACTG-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGCAAGGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAGGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGTAGAGAAGAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGCGGGAACCCTGGCTGATGGGCTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCGA-CACTTTtgggatggggatgggcgtgggaatgggctggccaGCAGGAG--GCCAGTCGTTT--AGGCTCCTGGGAGTTGGGGCCTGGATTCCTCAGGCGGACA-GGGCCAGCAGCCGGGATTAGGGATTTGAGAGACAGGATTGGGAGGGCTTAGCAGCTGCCTGG---GTGGAGCAGGGAGGGGGTCAGACAGAATCTCAGGGTCCCCTGGGTGTCTGAGTAGACAGTGGGGCCTTCGTGAAGAGGAGTGATTTGGGGGAAGGTGAATGCAGGTTGAGTTTGGGCCACAGAGTAAGAGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCACCCAGAGGG--CCCTGGTCCTAGGGAGAGCACAGTGGGTAGAGACAAGGCAGAACATGGAGAAGGCAGAGAACCAGGC-CTGAAGGAAGAGAGGA----GTCTGGGACAAAGCTGGATGTTGGGGTCCCAGGTTCTAAA-A-TCCAGGATTGT-GGGGTATGAGTTCAAAGGGATAC---------------AAACTGTACGGACTTGTTGAAACCAGAAAGACAGGGAGGAGAGAACTGGGTCCACAGGGAAGCTGTGGGTGGGAGAGGGTCAGGAAGTGGAAGATGACAGAGTCAGGTGTCAGACTCTGAGGGGTTTGGGAACCAGGGGCTT-TCGGGGAGATGATGGGTCCTTGAACAGAGCAGGG----ATTTGGAACCGAGGCTAAGATGTTAAATCCTAAAGGGGCCTTGA-----GGGGAGGGCAGGAGCGAGGCTTATGAATCTGGGCTTCCTCAGGGATAAATGGGTAGGGTTGAAGGGGCCTAGTGATGACAAATATCATCACGATTCTAAACAGCAAGCTCCTCACAAATGGG------GGTGATCATTATTACTGCTGGAGCAAGTCGG---AGGGTATCTGTATGCCAGAGGCAGTCACAG-TGGTGGGCAGGCT-CAGCTGAGAAATCTGGGCT----------GTCA-GTGAGGTGCAGATGGAGGCCAAGTCGTGGGATGGCACAAGGACCTCT-GGGTCTTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAAGGTGTGGGGAGAGGAGA-----GAGCAGTGGGATCCCAAGATGTC--AAGGCTAAGATTGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCCACCCC-GAAGGGGCTGGCGTGGAGG---TT-TTGGGTCTCCACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGCTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59981582 2801 + 64156825 GGGACTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTTCCTTTACCAGTCCCACCTACCTAACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCGGAGAATACGTGTTAATTCCTCTCCAATCTCTCCCAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTTCCTGCTGCACCTGTAGCCATGTGCTCCCTCTTCGGAGGACTGCTCTTTAGATACCTGCCGCCTGGGCAGGATTCTCACAGCCTTCTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATC--ATCTGGGTCTTCAGAGAGGAGGGCACAGGAAGAAGGTTCAGGACCTCTGGGTGTTAACCAGG--GGGAGGGGCTACATATTGCAGATGCTGAGGACCTAAGAGAATAGGCTCTAAGACTCATTGGGGGTAGGGGTTGGGGGG--TCCTCGAGTCCCTAGC---ATAAGGAA--GACTCAGTGGA--------------GTGGGTACTGGGACATCCCCTCCCACACTGACTTCTGAATTCCCTCCATCCCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGGGGCCTGGACGcctgtgtcctgagggttgagggaactgggagagtggactgctgggtcccagggagaaggagctgtggg------------tcccagttcccggatcctgagg---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCTAGAGCCTGAGTCCTAGACAGGTGGGAAGGTCACCAGATTCTTGAGATCTCAAG-GGGCGGAGGCAGCACGGCCAGACCCCAGAG-TTTTTCAAGAGAAGTAGGGTTTCTGGAGCTAAGGGAAG-GAAGAGGCAGCAGACTCAGAGCTCAGAAAGTAGGGTCATGAGGCTCAGGTCTGAGTGTCTGCTGGCCCTTAGTCACCTCCTTTCCCGCCTTTGAGAG-CCCCCTGCCAACTA-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGTAAGGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAGGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGTGGAGAAGAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGCGGGAACCCTGGCTGATGGCTTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAGGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCCA-CACCTTTGGGA------------TGGGGATGGGCTGGCCAGCAGGAG--GCCAGTCATTT--AGGCTCCTGGGAGTTGGGGCCTGGATTCCTCAGGCAGACA-GGGCCAGCAGCCGGGATTAGGGATTTGAGAGACAGGATTGGGAGGGCTTAGCAGCTGCCTGG---GTGGGGCAGGGAGGAGGTCAGACAGAATCTCAGGGTCCCCTGGGTGTCTGGGTAGACAGCGGGGCCTTCGTGAAGAGGAGCGATTTGGGGGAATGTGAATGCAGGTTGAGCTTGAGCCACAGAGTAAGCGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCATCCAGAGGA--CGCTGGTCCTAGGGAGAGCACAGTGGGTAGAGAC-AGGCAGAACATGGAGAAGGCAGAGAACTGGGC-CTGAAGGAAGAGAGGA----ATCTGGGACGAAGCTGGATATTGGGGTCCCAGGTTCTGAA-A-TCTGGGATTGT-GGGGTATGAGTTCAAAGGGATAC---------------AAACTGTATGGACTTGTTGAAACCAGAAACACAGGGAGGGGAGAGCCGGGTCCTCAGGGAAGCTCTGGGTGGGAAAGGGTCAGGAAGTGGACGATGACAGGGTTGGGTGTCAGATTCTGAGGGGTTTGGGAACCAGGGGCTT-TTGGGGAGATGATGGGTCCTTGAACAGAGCAGGG----ATTTGGAACTGAGACTAAGATGTTAAATGCTAAAGGGGCCTTGA-----GAGGAGGGCAGGAGCGAGGCTTATGGATCTTCGCTCCCGCTGGGATAAATGGGTGGGGTTG-GGGGACCTAGTGATGACAAATACCATCATGATTCTAAACAGCAAGCTCCTCACAAATGGG------GGTTATCATTATTACTGCTGGAGCAAGCTGG---AGGGTATCCGTATGCCAGAGGCAGT--CAG-TGGTGGGCAGGCT-CAGTTGAGAAATCTGGACTCAGTTGAGAAATCAGGTGAGGTACAGAT-GAGGCCAAGTCATGGGATGGCACAAGGACCTCTGGGGTTGTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAACGTGTGGGAAGAGGAGGGAGCAGAGCAGTGGGATCCCAAGATGTC--AAGCCCTG---TGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCTACCCCAGAAGGGGCTGGCGTGGAGG---CT-TTGGGTCTCTACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGGTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55006297 2801 + 59248254 GGGACTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTTCCTTTACCAGTCCCACCTACCTAACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCGGAGAATACGTGTTAATTCCTCTCCAATCTCTCCCAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTTCCTGCTGCACCTGTAGCCATGTGCTCCCTCTTCGGAGGACTGCTCTTTAGATACCTGCCGCCTGGGCAGGATTCTCACAGCCTTCTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATC--ATCTGGGTCTTCAGAGAGGAGGGCACAGGAAGAAGGTTCAGGACCTCTGGGTGTTAACCAGG--GGGAGGGGCTACATATTGCAGATGCTGAGGACCTAAGAGAATAGGCTCTAAGACTCATTGGGGGTAGGGGTTGGGGGG--TCCTCGAGTCCCTAGC---ATAAGGAA--GACTCAGTGGA--------------GTGGGTACTGGGACATCCCCTCCCACACTGACTTCTGAATTCCCTCCATCCCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGggggctgggggcctggacgcctgtgtcctgagggttgagggaactgggagagtggactgctgggtcccagggagaaggagctgtggg------------tcCCAGTTCCCGGATCCTGAGG---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCTAGAGCCTGAGTCCTAGACAGGTGGGAAGGTCACCAGATTCTTGAGATCTCAAG-GGGCGGAGGCAGCACGGCCAGACCCCAGAG-TTTTTCAAGAGAAGTAGGGTTTCTGGAGCTAAGGGAAG-GAAGAGGCAGCAGACTCAGAGCTCAGAAAGTAGGGTCATGAGGCTCAGGTCTGAGTGTCTGCTGGCCCTTAGTCACCTCCTTTCCCGCCTTTGAGAG-CCCCCTGCCAACTA-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGTAAGGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAGGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGTGGAGAAGAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGCGGGAACCCTGGCTGATGGCTTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAGGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCCA-CACCTTTGGGA------------TGGGGATGGGCTGGCCAGCAGGAG--GCCAGTCATTT--AGGCTCCTGGGAGTTGGGGCCTGGATTCCTCAGGCAGACA-GGGCCAGCAGCCGGGATTAGGGATTTGAGAGACGGGATTGGGAGGGCTTAGCAGCTGCCTGG---GTGGGGCAGGGAGGAGGTCAGACAGAATCTCAGGGTCCCCTGGGTGTCTGGGTAGACAGTGGGGCCTTCGTGAAGAGGAGCGATTTGGGGGAATGTGAATGCAGGTTGAGCTTGAGCCACAGAGTAAGCGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCACCCAGAGGA--CGCTGGTCCTAGGGAGAGCACAGTGGGTAGAGAC-AGGCAGAACATGGAGAAGGCAGAGAACTGGGC-CTGAAGGAAGAGAGGA----ATCTGGGACGAAGCTGGATATTGGGGTCCCAGCTTCTGAA-A-TCTGGGATTGT-GGGGTATGAGTTCAAAGGGTTAC---------------AAACTGTATGGACTTGTTGAAACCAGAAACACAGGGAGGGGAGAGCCGGGTCCTCAGGGAAGCTCTGGGTGGGAAAGGGTCAGGAAGTGGACGATGACAGGGTTGGGTGTCAGATTCTGAGGGGTTTGGGAACCAGGGGCTT-TTGGGGAGATGATGGGTCCTTGAACAGAGCAGGG----ATTTGGAACTGAGACTAAGATGTTAAATGCTAAAGGGGCCTTGA-----GAGGAGGGCAGGAGCGAGGCTTATGGATCTTCGCTCCCGCTGGGATAAATGGGTGGGGTTG-GGGGACCTAGTGATGACAAATACCATCATGATTCTAAACAGCAAGCTCCTCACAAATGGG------GGTTATCATTATTACTGCTGGAGCAAGCTGG---AGGGTATCCGTATGCCAGAGGCAGT--CAG-TGGTGGGCAGGCT-CAGTTGAGAAATCTGGACTCAGTTGAGAAATCAGGTGAGGTACAGAT-GAGGCCAAGTCATGGGATGGCACAAGGACCTCTGGGGTTGTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAACGTGTGGGAAGAGGAGGGAGCAGAGCAGTGGGATCCCAAGATGTC--AAGCCCTG---TGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCTACCCCAGAAGGGGCTGGCGTGGAGG---CT-TTGGGTCTCTACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGGTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47112571 2794 + 51301725 GGGACTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTTCCTTTACCAGTCCCACCTACCTAACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCGGAGAATGCGTGTTAATTCCTCTCCAATCTCTCCCAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTTTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTTCCTACTGCACCTGTAGCCACGTGCTCCCTCTTCTGAGGACTGCTCTTTAGATGCCTGCCGCCTGGGCAGGATTCTCACAGCCTTCTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATC--ATCTGGGTCTTCAGAGAGGAGGGCACAGGAAGAAGGTTCAGGACCTCTGGGTGTTGACCAGG--GGGAGGGGCTACATATTGCAGATGCTGAGGACCTAAGAGAATCGGCTCTAAGACTCACTgggggtaggggttgggggg--TCCTCGAGTCCCTAGC---ATAAGGAA--GACTCACTGGA--------------GTGGGTACTGGGACATCCCCTCCCACACTGACTTCTGAATTCCCTCCATCCCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGACTGGGGGCCTGGACGCCTGTGTCCTGAGGGTTGAGGGAACTGGGAGAGTGGACTGCTGGGTCCCAGGGAGAAGGAGCTGTGGG------------TCCCAGTTCCCGGATCCTGAGG---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCTAGAGCCTGAGTCCTAGAGAGGTGGGAAGGTCACCAGATTCTTGAGATCTCAAG-GGGCGGAGGCAGCACGGCCAGACCCCAGAG-TTTTTCAAGAGAAGTAGGGTTTCTGGAGCTAAGGGAAG-GAAGAGGCAGCAGACTCAGAGCTCAGAAAGTAGGGTCATGAGGCTCAGGTCTGAGTGTCTGCTGGCCCTTAGTCACCTCCTTTCCCGCCTTTGAGAG-CCACCTGCCAACTA-CACTCTCTGCAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGTAAGgagggcctgggcctggcccagaagGTAGATCCTGcccagaaggagaaggaagaggttgGCCAGTGGCTCACGGTGAGTTGGGGTGGAGAAGAGGAGGTAAACTCTGAGGATCCTGAGCCCTGGGTGTAGGTGGGAACCCTGGCTGATggctttcctcttc-ctctccctcccctagaaTACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAGGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCCA-CACCTTtgggatggggatgggc-tggggatgggctggCCAGCAGGAG--GCCAGTCATTT--AGGCTCCTGGGAGTTGGGGCCTGGATTCCTCAGGCGGACA-GGGCCAGCAGCCGGGATTAGGGATTTGAGAGACAGGATCGGGAGGGCTTAGCAGCTGcctgg---gtggggcagggaggaggtcAGACAAAATCTCAGGGTCCCCTGGGTGTCTGGGTAGACAGTGGGGCCTTCGTGAAGAGGAGTGATTTGGGGGAATGGGAATGCAGGTTGAGCTTGAGCCACAGAGTAAGCGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCATCCAGAAGA--CACTGGTCCTAGGGAGAGCACAGTGGGTAGAGAC-AGGCAGAACATGGAGAAGGCAGAGAACTGGGC-CTGAAGGAAGAGAGGA----ATCTGGGACGAAGCTGGATATTAGGGTCCCAGGTTCTGAA-A-TCTGGGATTGT-AGGGTATGAGTTCAAAGGGATAC---------------AAACTGTATGGACTTGTTAAAACCAGaaacacagggaggggagagcTGGGTCCTCAGGGAAGCTGTGGGTGGGAAAGGGTCAGGAAGTGGACGATGACAGGGTTGGGTGTCAGATTCTGAGGGGTTTGGGAACCAGGGGCTT-TTGGGGAGATGATGGGTCCTTGAACAGAGCAGGG----ATTTGGAACTGAGACTAAGATGTTAAATGCCAAAGGGGCCTTGA-----GAGGAGGGCAGGAGCGAGGCTTATGGATCTTTGCTCCTGCTGGGATAaatgggtggggttg-ggggaccTAGTGATGACAAATATCATCATGATTCTAAACAGCAAGCTCCTCACAAATGGG------GGTTATCATTATTACTGCTGGAGCAACCTGG---AGGGTGTCCGTATGCCAGAGGCAGT--CAG-TGGTGGGC--------------------GGGCTCAGTTGAGAAATCAGGTGAGGTGCAGATGGAGGCCAAGTCATGGGATGGCACAAGGACCTCTGGGGTTGTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAACGtgtgggaagaggaaggagcagaGCAGTGGGATCCCAAGATGTC--AAGCCCTG---TGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCCACCCCAGAAGGGGCTGGCGTGGAGG---CT-TTGGGTCtccacaggggtcagggactgaGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGGTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46819762 2810 + 50890351 GGGACTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTTCCTTTACCAGTCCCACCTACCTAACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCGGAGAATACGTGTTAATTCCTCTCCAATCTCTCCCAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTT-CTACTGCACCTGTAGCCACGTGTGCCCTCTTCTGAAGACTGCTCTTTAGATACCTGCCGCCTGGGCAGGATTCTCACAGCCTTCTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTAC-GGGGCTGAGACCCTAATCTTATCTGGGTCTTCAGAGAGGAGGGCACAGGAAGGAGGTTCAGGACCTCTGGGTGTTGACCAGG--GGGAGGGGCTGCATATTGCAGATGCTGAGGACCTAAGAGAATCGGCTCTAAGACTCACTGGGGGTAGGGGTTGGGGGG--TCCTCGAGTCCCTAGC---ATAAGGAA--GACTCACTGGA--------------GTGGGTATTGGGACATCCCCTCCCACACTGACTTCTGAATTCCCTCCGTCCCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTgagggg-ctgggggcctggacgcctgtgtcctgagggttgagggaactgggagagtggactgctgggtcccagggagaaggagctgtggg------------tcCCAGTTCCCGGATCCTGAGG---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCTAGAGCCTGAGTCCTAGAGAGGTGGGAAGGTCACCAGATTCTTGAGATCTCAAG-GGGCGGAGGCAGCACGGCCAGACCC--GAG-TTTTTCAAGAGAAGTAGGGTTTCTGGAGCTAAGGGAAG-GAAGAGGCAGCGGACTCAGAGCTCAGAAAGTAGGGTCATGAGGCTCAGGTCTGAGTGTCTGCTGTCCCTTAGTCAGCTCCTTTCCCGCCTTTGAGAG-CCCCCTGCCAACTA-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGTAAGGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAAGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGT-GAGAAGAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGCGGGAACCCTGGCTGATGGCTTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAGGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCCA-CACCTCtgggatggggatgggcatggggatgggctggTCAGCAGGAG--GCCAGTCATTT--AGGCTCCTGGGAGTTGGGGCCCGGATTCCTCAGGCGGACA-GGGCCAGCAGCCGGGATTAGGGATTTGAGAGACAGGATCGGGAGGGCTTAGCAGCTGCCTGG---GTGGGGCCGGGAGGAGGTCAGACAGCATCTCAGGGTCCCCTGGGTGTCTGGGTAGACAGTGGGGCCTTCGTGAAGAGGAGCGATTTGGGGGAATGTGAATGCAGGTTGAGCTTGAGCCATAGGGTAAGCATGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCATCCAGAGGA--TGCTGGTCCTAGGGAGAGCACAGTGGGTAGAGAC-AGGCAGAACATGGAGAAGGCAGAGAACTGGGC-CTGAAGGAAGAGAGGA----ATCTGGGACGAAGCTGGATATTGGGGTCCCAGGTTCTGAA-A-TCTGGGATTGT-GGGGTATGAGTTCAAAGGGATAC---------------AGATCGTATGGACTTGTTGAAACCAGAAACACAGGGAGGGGAGAGCCGGGTCCTCAGGGAAGCTGTGGGTGGGAAAGGGTCAGGAAGTGGACGATGACAGGGTTGGGTGTCAGATTCTGAGGGGTTTGGGAATCAGGGGCTT-TTGGGGAGATGATGGGTCCTTGAACAGAGCAGGG----ATTTGGAACTGAGACTAAGATGTTAAATGCTAAAGGAGCCTTGA-----GAGGAGGGCAGGAGCGAGGCTTATGGATCTTTGCTCCCACTGGGATAAATGGGTGGGGTTG-GGGGACCTAGTGATGACAAATATCATCATGATTCTAAACAGCAAGCTCCTCACAAATGGC------GGTTATCATTATTACTGCTGGAGCAAGCTGG---AGGGTATCCGTGTGCCAGAGGCAGT--CAG-TGGTGGGCGGGCT-CAGTTGAGAAATCTGGACTCAGTTGAGAAATCAGGTGAGGTGCAGATGGAGGCCAAGTCATGGGATGGCACAAGGACCTCTGGGGTTGTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAACGTGTGGGAAGAGGAGGGAGCAGAGCAGTGGGATCCCAAGATGTC--AAGCCCTG---TGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCCACCCCAGAAGGGGCTGGCGTGGAGG---CT-TTGGGTCTCCACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGGTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45395815 2768 + 49145316 GGGGCTGGTCTCTTGTC----------------AGCGGAGGTTTCTTCTCTTTACCATTCCCACCCACCTCACTATGCTGACTAGGTCCCT-GGCTCTGGGTTTGAACCAGCCAGGGAATACATGTTAATTCCTCTCCAATCTCTCCTAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGACAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTA-----ACTTCCCGCTGCACCTGTAGCCACGTGCTCTCGCTTCTGAGGACTGCTCTTTAAAT-CCTGCTGCCTGGGCAGGATTCTCACAGCCTTCTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGCGGCTGAGGCCCTAATC--ATCTGGGTCTTCAGAGAGGAGGGCACAGGAAACAGGCTCAGGATCTCTGGGTGTTGACCAGGGAGAGAGGGGCTACATA-TGCAGGTGCTGAGGACCTAAGAGAATCAGTTCTAAGATAGACTGGGGATAGAGGTGCGGGGG--TCCTCGAGTCCCTAGC---AT-AGGAA--GAATCACTGGA--------------GTGGGTACTGGGGCATCCCCTCCCACACTGACTTCTGAATTCTCTCCATCCCTCAGCTCCATAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGGGGCCTGGACGcctgtgtcctgagggtagagggaactgggagagtggactgctgggtcccagggagaaggagctgtggg------------ccccagttcccaggtactgagg---TCTGACTTTCTTTCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCATCCAATGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCCAGATCCTGAGTCCCAGAGCGG--GGGAGGTCACCTGATTCTTGAGATCCCAAG-GGGTGGAGGCAGAGTGGCCAGACCCCAGAG-GTCCCCAAGAGAAGCAAGGTTCCTGCACCTAAGGGAAGGGAAGAGGCAGCAGACTCAGAGCTCAGAAAGTAGGGTCATGAGGCTCAGGGCTGAGTGTCTGCTGGCCCTTAGTCAGCTCCTTTCCCACCTTCGAGAG-CCCCCTGCCAACTG-CACTCTCTACAGCAAATGGAGCGGTTCAAAGTTGTGGAGCGAGAGACCAAAACCAAAGCTTACAGCAAGGAGGGCCTGGGCCTGGCCCAGAAGGTGGACCCTGCCCAGAAGGAGAAGGAGGAGGTCGGCCAGTGGCTCACGGTGAGTTGGGGCAGAGAAGAGGAGGTGAACTCTGGGGATCCTGAGCCCCGGGCATACCTGGGAACCCTGGCTGATGGCCTTCCTCT----TCTTCCTCTCCTAGAATACCATTGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCTGG-CGCCTTTGGGAAGGGGGTGGGGATGGGGACGGGCTGGCCAGCAGGAGGTGCCAGTCATTT--AGGCTCCTGGGAGTTGAATCCTGGATTCCTAAGGTGGACAGGGGCCAGCAGCTGGGATTAGGGATTTGAGAGACACGATCGGGAGGGCTTAGCAGCTGCCTGG---GTGAGGCAGG-AGGAGACCAGACCGAATTTCAGGGTCCCCTGGGTGTCTAGGTAGGCAGCAGGGCCTTGGTGAAGAGGAGCGGTTTGGGGGGAGGTGAATGCAGGTTGAGCTTGGGCCCCAG---AAGTGTGAGACCTGTAGGAC-ACCCATGGCAG---------------GAAGCTTCATGGCACCCAGAGGG--CCCTGGTCCTGGGGAGAGCACAGT---TAGAGACAAGGCAGAATCTGGAGAAAGCAGAGAACCAGGC-CTGAAGGAAGAGAGGA----GTCTGGGACAAAGCTGGATGCTGGGATCCCAGGTTCTAGA-A-TCCAGGATTGT-GGGGTGTGAGTTCAGGGGGATACTTGTTGAAATCGGGGAAACTATAGATACTTGTTGAAACCAGAAAGACAAGGAGGGGAGAGCCAGGTCCTCAGGGAAGCTGTGGGTGGGAGAGGGTCAGGAAGTGGATGATGTCAGGGTTGGGTGTCAGACTCTGAGGGGTTTGGGAACCATGGGCTTGGAGAGGAGTTGTTGGGTCCTTGGACAGAGCAGGG----ATTTGGAACCGAGGCTAAGTTGTTAAATCGTAGAGAGTCCTTGA-----GGGGAGGGCAGGATCGAGGCTTATGAGTCTGGGCTCCCTTGGGGATAAATGGATAGGGTTG-GGAGGCCTAGTGCTGACAGA-ATCATCATTATTCTAAACAGCAAGCTCCTCACAAATGGC------GGTTATCATCATCACTGCTGGGGCAAGCCGG---GGGTGGG--GCATGCCAGAGGTAGTCACAGCCGGTGG------------------------------------------GTGAGGTGCAGGTGGAGGCCAAACCGTAGGATGGCACAGGGACCTCT-GGGTCGTTTAGAGGTTTCCAAGAA---CTGGAGCCAGAAAGGTCTGGGGAGAGGAAG-----GAGCAGTGGGATCCCAAGATGTCAGAAGTCTGAGA-TTGCTCTCACAGGGGACAGAGGGTGGGTGGACCCCATACTGGCCCACCCCAGAAGGGGCTGGAATGGAGG---CT-TTGGGTCTCCACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAGAGAGGGGCC-AAGCAGGTGCTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i calJac3.chr22 C 0 M 1562 s mm10.chr7 3650652 2539 + 145441459 AGGCCTAAGCTC-TGTCAGGTGAGGGAAGAGCAAGTTAGTGTCTCTTCCTTCTACT--CTCCTACTACCCCTGATTCCTATCCACATTCAT-GACT-TGAGTTTGCACCAGCCCAGGAATGGATGTTAAGTCTATCCCAATTGTTCCCAGCAGCGGCCATTTTCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTA----ATCGACTGTCTACTGTTCATGTGGCTACATGCCCTTCCTTCCGGGAA---TTCTCTGGATATTTGCAATCTTGGCAAGATCCTAACAGTCTTA---CTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAAGGGGTGGAGCAGTTTGAAGATATTTGGCAAAAGGTA-AGGACCTAGGAACCTTA-A--ATTTTGTTGTCTGTAGGGCAAAGAATCAAGAAGAGGTTCAGGGCCTTGGGGTCTTGACCAGG----------------------------------------GAAGCATCTCTAAGATCGATTGTGGGGA-------GGGGG--TCCTAGATTTCCCAGCCGAGGAAGAAA--GAG--ACTGGACCTTTACAGCTATGGCGAGTTCTGGG-CAGCCACTTTCACATTGACTGCTGAATT--CTTCATCCCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGGGA--TGGACTCTTGTGTCCTATGGGAGGAGGG-ATGGAGACAGTGGACTGCTGGGTCCCAGGGAGAAAAGGTCATTGAGGACCCCCCTCCCCCCAGTTTCCAGGT-CTACAA---CCTAATTATCTTGCTTTT-TCTCCCTTCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCATCAAATGAGATCAAGGACAAAAGGCAGCTTATTGAAAACCGCAAGCTCATTGAGACGGTTAGAAACCAGAGCCTGGGGTTCTTTGGGGTGGGAATATGGTCAGGCTCCTGGGACCCAAAGAAGGTGGAGGTGGAGCAGTCA----CTAGAGAGTCCTCGGGAGGAGTATTGTTTCCACAACTAAGGGAAGGGCAGA--------AATGAGGGCTCAGG------------------CTGTTTCTAGCAT-TGCTGGCTCTTA--TAGCTCCTTTTCCATCTTTGAGCA--CCTCTGCCAACTATTACTCTTCACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCGTATAGCAAGGAGGGTCTGGGTCTGGCTCAGAAGGTGGATCCTGCCCAGAAGGAGAAGGAAGAAGTTGGCCAGTGGCTCACGGTGAGTTGGGACGGAGAAGA--AAGTAAGCACTTGGGCCC---AGACTTAAATATATACCAGGGCCTTGA-GGACAAACCT-CTCTTC-CCTTCTCTTCCCCAGAACACCATTGACACCTTAAATATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCGGTACAGACACGCAAGAAGAAAGGCGACAAGGATGTGAGTGGTGGGGGCACCATCACCCACAGGGTAAGGG------TGGAGGTGGCCT-GTGAACAGAGG--G-----CATCTGGAGGCTCATAGGAGTCTGGTCCTGGAT-----------ACA-----------CCTGGGGCAGAGATTGAAAAGGCAGAACAAGGCAGCTT----AGCTGGCTGAGTTGTGGTATAGGGAGGAAGTGAGAGAGGATATTG---------GGATATTTGGGTAGACAGTGTAGCCATTGT---TAGGGGCAGTTTGGGTGAAGATGGACTTAGGTTCAGCTGGCACCACATA------GTGAGACCTGAAGAAAGGACCAAATTGG---------------GAAGATACACAGCACTCCAAAAATTCCCAGGATCTCAGGAGGG---GGTTGGTATGTCT--------------------CTAAGAACCAGTTGCTGTTGGAAACCTGGAAATGGTTTGGGCCAAAGTCATATGATAGGGTCCCGAATCTTACACC-TTTAGGATTGTAAGGGTGTGAGTTCAAAGGGATGT---------------CGACTCTGTCTCGTTAATGGTGTCA-----CCAGGGAAGGAAGTTCTGA----------------TGGGATGGAAAG--------AAAGAAAGATGTCA-----------------CTGG-----------------------GAGGGAAAAGAGTAGATCCTTGATAAAAGGAGGA----ATTTGGAGCTGGCACTAAGGCATTACGTTGTGAAGGGAATTGGAACCTCGAGAAGAGCAGGAGC------------TCTCTGTGGCTGCCCTGATAAACGG-----------------------------------------------ACAGCCAGTTTCCTTCCCATGGACTCTACCTTTATCACTATCATTACCGTTGC--GCTGAGATAGGATGTCTAT-TTCCGGCAGAGGTCAGAA-TGGTGGG-AGGCC-TGGGTAAGACTT----GCT----------GACAGGTAAG--CCAGGCAGAGGCCAAGTTGTAGGGTAGCGCAGGTA-------------TTACAGGTTTCTAGGGATCTTTAGAGCCAAAAGGGTTTGAGGAGA----------GAGAAATGGATCCTTGAGATGTCAGAAACCTCAGATTTGTCCTCACTGGG-ACAGAGGATGGGCAAACTTCTCACTGGCCCATGTT-AGGAGGGCTGGAGCAGAGGCACCC-TTGGGGTGCCCTAGTGATGGGGGACTGAGGACAGGTTCTGTGGGGGCAG-GA-GGGCT-GGCCAGGTGCTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i mm10.chr7 I 117 C 0 s canFam3.chr1 19611768 2368 - 122678785 TGGCCTCATCTCTCATCAGAG------------AGTGAACGCATCTTCGCTTTACCA-TCCCATGTATTC--CTGTTC---CCAGCCCCGTCATGTTTGTGTTTGGAACAGACAGGGAATAAACAT--GTCCCCCTTCCTTGTCTCTCAGCAGCGTCCGTCTCTAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTGGTCTCCCTGCCCACTGCCTGTGTGGCCTCGTGCCCACTATCCTCAGAACTCCCCACTGGGTGCCTGCTGCCTGGGCAAGGTGCTAATAGCCTC--TCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAACAGTTTGAGGATATTTGGCAGAAGGTACAGAGCCTGGGGCCTTAACA--GTCTGGGTCTTAGAGGAGAAGAGCATGGGAA-AAGGCTCAGGGTCTCTGGGTGTAGGCCAGG--GAGAGGGGCTGTGGG--TCTGGTGCTGAGGAC--GGAAGGAGCAGCTCTGAGACAGATGGGGG--------TGGGGGC--ATCCATACTCCTCAGA---GGCTGGAGCTTCACCACTAGA--------------ATGGGCACTAGGATGGCAAGCCCCACACTGACACCTGGGCTCCCTTCATCCCGCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAAGCTGATCTAAAGAAGGAGATTAAGAAGCTTCAAGTGAGGGGCCTAGGGGCCCGGCTTCCTGCATCCTGAGGGCAGAGGGAACAGGGAG-----------------------GAGGGGGCTGGCAG------------CCTTGGTGCCCAGGTCCTGAGGCAATGTGAC--TCTTGCTTTTCCCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCATCCAACGAGATCAAGGACAAGAGGCAGCTCATAGACAACCGCAAACTCATTGAGACGGTAGGAGCTCAGAGCCTG-GTACCTGAGAGGTGGG-AGGTGGCCGGACTCCCTGGG-CCCAAG----------------------------AAG---TCTCTGGAAGAGGATGGTTTCTCCAGCAAGGTTAAGGGGAGAGGTGATGGGCTGGGA------------------------------------------------------------------------------TCTCCTGCCAACTG-CGCTCTCCACAGCAAATGGAACGGTTCAAAGTTGTGGAGCGAGAGACCAAGACTAAAGCCTACAGCAAGGAGGGCCTGGGCCTGGCGCAGAAGGTGGACCCTGCCCAGAAGGAGAAGGAGGAGGTCGGCCAGTGGCTCACAGTGAGTCAGGAAAGAGAGGAGGAGGTGACCTTTGGGG-CCCTAACCTCCAGGCATCCACGGAGACCT--GCTGACCAGCTGCCTTTCCACTCCCTCTCCCCCAGAACACCATTGACACCCTGAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCTGTGCAGACGCGCAAGAAGAAAGGTGACAAGGATGTGAGTAGGGGGGACACTG-CACCCAGGGGA------------CAGAGATGAGCTGGCGAGTGGGAG--G-----CATGT--GGCCCGTTGGG------------------------------GG----------------------------------------------TAGCACCTGTCT-----GTGAGCCAG------------------TGTCAGGGCTCCA-----GCCTTGGTCAGCAGTGGCACCATGGAAAGGGGGAGTGGTTTGGGGGAACATGC---TGGGTTCTGCTGGGGTTGCAGACTAG--GTGAGAGCAGATAGCC-ATACAGGGTGGAGAAGTCTGAGAGCTGAAGCCTCCTGGCTCCGAGAAGG--CTCAGGTCCTGAGG------CAGTAAGGAGAGGC-AAGCCTCATTTGG-----GCTGAGAA--GAGC-C-------------------ATCTAGGGCAGAGCCAGCT-CTAGGTTCCCAGATTCCAGA-ACTCCAGGGCTGA-AGGGTGTGGATTCAGGGGGATGC---------------AAACGACATGTACTTGATGG---------CAGAGGCAGCGGAGAGCTGGGTCCAGGGGCAGG--GGGCATGGGAGAGG----------------TGCCCAATCTGGGTGTCAGACTCCGAGGAGTTTGGGAAGCTGGAGCCA----------CAACAGGTCCTTGTGGAAAGGATGGGGATATTTAGAACTGAAG-----------------GAGGGGCAGGTGG-----CTGGAGAGCCCGAGCCAAGCTACTGAATCTGGACCCCT----------AGGGGTGGGGATT----------GTGAGGACAAAGATGACGGTGGTCATAAACAGCAAGCTTGCTGCAAACAGG------CATCATCAT--TTGCCGTTAGAGCAAGATGG---GG-------------------------CGG-GGTGGGGTAGGCTGCAGTTGTGAGATCTGGGCT----------GTC--GGGAGCTGCAGG-GAGGGCCACAGTGTAGGA-GGCATGGGGCTTTCT-GGTCTGTTGGGAGGTTTCCAGGGATGTCTGG------------GTGG---------------GAGCTGAGGGTCCTTGAGGGGTC--------------------------------GGGGCGGGCAGACTCCACACTGCCCGTGCCA-GGAGGGGCTGGAGTGGAGC---CTCCTGCATCTCTGCAGGGGTCGGGGACTGAGGACGGGTTCTGCGGGGGCAG-GAGGGGCCTGGGCAGGTGCCCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i canFam3.chr1 C 0 C 0 a score=789135.000000 s hg38.chr19_GL949747v2_alt 120438 193 + 729520 GCCAGCAGAAGCAGGACCGGATTGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTCGTTGACGCCATCCGCAAGATCAAGGACGACGTTGAGTACTATGTTGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA s panTro4.chr19 59054403 193 + 63644993 GCCAGCAGAAGCAGGACCGGATTGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTCGTTGACGCCATCCGCAAGATCAAGGACGACGTTGAGTACTATGTTGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55930651 193 + 60714840 GCCAGCAGAAGCAGGACCGGATCGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTATCACGTGCGCATGTTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTCGTTGATGCCATCCGCAAGATCAAGGACGACGGTGAGTACTATGTTGACTCATCCCAGGACCCTGACTTCGAGGAGAACGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102696329 193 - 106955855 GCCAGCAGAAGCAGGACCGGATCGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTCGTTGATGCTATCCGCAAGATCAAGGACGACGTCGAGTACTATGTCGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59984383 193 + 64156825 GCCAGCAGAAGCAGGACCGGATCGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTTGTTGATGCCATCCGCAAGATCAAGGATGACGTTGAGTACTATGTCGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55009098 193 + 59248254 GCCAGCAGAAGCAGGACCGGATCGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTTGTTGATGCCATCCGCAAGATCAAGGATGACGTTGAGTACTATGTCGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47115365 193 + 51301725 GCCAGCAGAAGCAGGACCGGATCGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTTGTTGATGCCATCCGCAAGATCAAGGACGACGTTGAGTACTATGTCGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46822572 193 + 50890351 GCCAGCAGAAGCAGGACCGGATCGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTTGTTGATGCCATCCGCAAGATCAAGGACGACGTTGAGTACTATGTCGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA i chlSab2.chr6 C 0 C 0 s mm10.chr7 3653191 193 + 145441459 GCCAGCAGAAGCAGGACCGGATTGAGGGCTTGAAGCGGCATATCGAGAAGCACCGCTACCATGTTCGTATGCTGGAGACCATCCTGCGAATGCTGGACAATGACTCCATCCTGGTTGATGCCATCCGCAAGATCAAGGATGATGTGGAGTACTACGTTGACTCATCCCAGGACCCCGACTTTGAAGAGAACGA i mm10.chr7 C 0 C 0 s canFam3.chr1 19614136 193 - 122678785 GCCAGCAGAAGCAGGACCGGATTGAGGGCCTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTGGAGACCATCCTGCGCATGCTGGACAACGACTCTATCCTTGTTGATGCCATTCGCAAGATCAAGGATGACGTTGAGTACTATGTCGACTCGTCCCAGGACCCTGACTTCGAGGAGAACGA i canFam3.chr1 C 0 C 0 e calJac3.chr22 45398583 1562 + 49145316 M a score=3643538.000000 s hg38.chr19_GL949747v2_alt 120631 1023 + 729520 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGCCCAGAATGGGC--TGTGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCTCCCAGCCACAGCCACATGGAGGATGAGATCTTCAAccagtccagcagcacgcccacctcaaccacctccagctctcccatcccgcccagcccagccAACTGTACCACGGTGAGGCCCCACGGGACACTAGTACCTTGTGTTTCCAGCAGGGCAGGACTCGAGGAGACAAATCTGGGTCACTCCAAAGTGGCTATGGGAGCGTAATTGAGGAAACACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACACGCTAAGGTCCTATATCTGGGTCCCTAAAGGACATAAAGAGCAATAGGGTGCATCCCGCGCCAGTTTAGGTCCTGGAT-CTGGGAAGTGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGCTTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAAAACAAGAAGACTGGAGAGCCTGAATTGAGATGGTTTCTCCAGGCAGATTAAGGACAGCC--ATTTGACCAGCTCTGGGGCCGCAATGGCAGTCAATTGGGCCCAGGT-----------------------CCCCGGGGCATTCAGAGATTGGCGGTTCTCCATCAGAGCCCCAGAGGTCACACAG-GTTTCTA-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGCCTGGACCGGGTGGGCACGCCATTCACTCCTCTGTTGCTTCCCAAAGGCATCTTGAGGCCTGAGCGCCGGCCACTGTGCTGGGCTGGTGGACACAGGTGGCTCAGAAATCAGTGCTGCCCTGAgggcaggtgggcag s panTro4.chr19 59054596 1023 + 63644993 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGCCCAGAGTGGGC--TGTGTGAGCCGGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACGCCCACCTCAACCACCTCCAGCTCTCCCATCCCGCCCAGCCCAGCCAACTGTACCACGGTGAGGCCCCACGGGACACTAGTACCTTGTGTTTCCAGCAGGGCAGGACTCGAGGAGACAAATCTGGGTCACTCCAAAGTGGCTATGGGAGCGTAATTGAGGAAACACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACATGCTAAGGTCCTATATCTGGGTCCCTAAAGGACATAAAGAGCAATAGGGTGCATCCCGCGCCAGTTTAGGTCCTGGAT-CTGGGAGGTGGGAGGGGCCGGTGCCTGGGCTGCCTGAAGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGCTTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAAAACAAGAAGACTGGAGAGCCTGAATTGAGATGGTTTCTCCAGGCAGATTAAGGACAGCC--ATTTGACCAGCTCTGGGGCCTCAATGGCAGTCAATTGGGCCCAGGT-----------------------CCCCGGGACATTCAGAGATTGGCGGTTCTCCATCAGAGCCCCAGAGGTCACACAG-GTTTCTA-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGCCTGGACCGGGTGGGCATGCCATTCACTCCTCTGTTGCTTCCCAAAGGCATCTTGAGGCCTGAGCGCCGGCCACTGTGCTGGGCTGGTGGACACAGGTGGCTCAGAAATCAGTGCTGCCCTGAGGGCAGGTGGGCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55930844 1021 + 60714840 GTTTCTCTATGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGCCCAGAGTGGGC--TGTGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACGCCCACCTCGACCACCTCCAGCTCTCCCATCCCGCCCAGCCCAGCCAACTGTACCACGGTGAGGACCCACGGGGCACTAGTACCTTGTGTTTCCAGCAGGGCAGGACTCGAGGAGACAAATCTGGGTCACTCCAAAGTGGCCAGGGGAGAGTAATTGAGGAA--ACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACACCCTAAGGTCCTACATCTGGGTCCCTAAAGGACACAAAGAGTAATAGGGTGCATTCCGCGCCAGTTTAGGTCCTGGAT-CTGGGAGGTGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGCTTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAGAACAAGAACATTGGAGAGCCTGAATTTAGGTGGTTTCTCCAGGCAGATTAAGGACAGCC--ATTTGACCAGTTCTGGGGCCACAATGACAGTCAATTGGGCCCAGTT-----------------------CCCCGGGACATTCAGAGATTGGCGGTTCTCCATCAGAGCCCCAGAGGTCACACAG-GTTTCTA-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGCCTGGAATGGGTGGGCATGCCATTCACTTATTTATTGGTTCCCAAAGGCATATTGAGGCCTGATCGCTGGCCACTGTGCTGGGCTGGTGGACTTTTTTGGGTCAGAAATCAGTGCTGCCCTGAGggcaggtgggcag i ponAbe2.chr19 C 0 I 502 s nomLeu3.chr10 102696522 1023 - 106955855 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGCCCAGAGTGGGC--TGTGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCGCCGAGCCACAGCCACATGGAGGATGAGATCTTCAAccagtccagcagcacgcccacctcgaccacctccagctctcccatcccgcccagcccagccAACTGTACCACGGTGAGGCCCCACGGTGCACTAGTACCTTGTGTTTCCAGCAGGGCAGGACTCGAGGAGACAAATCTGGGTCACTCCAAAGTGGCTAGGGGAGAGTAATTGAGGAAACACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACACCCTAAGGTCCTACACCTGGGTCCCTAAAGGACATAAAGAGTAATAGGGTGCATCCCGTGCCAGTTGAGGCCCTGGAT-CTGGGAGGTGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTGGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGCTTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAACACAAGAACATTGGAGAGCCTGAGTTTGGGTGGTTTCTCCAGGCAGATTAAGGACAGCC--GTTTGACCAGCTCTGGGGCTGCAATGGCAGTCAATGGGGCCTAGGT-----------------------CCCCGGGACATTCAGAGATTGGCGGTTCTCCATCAGAGCCCCAGAGGTCACACAG-GTTTCTG-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGTCTGGAATGGGTGGGCATGCCATTCACTTATTTATTGGTTCCCAAAGGCATATTGAGGCCTGAGTGCCGGCCACTGTGCTGGGCTGGTGGACACAGGTGGGTCAGAAATCAGTGCTGCCCTGAgggcaggtgggcag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59984576 1010 + 64156825 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGTCCAGAGTGGGC----TGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACACCCACCTCGACCACCTCCAGCTCTCCCATCCCGCCCAGCCCAGCCAACTGTACCACGGTGAGGCCCCACGGGGCACGAGTACCTTGTGTTTCCAGCAGGGCTGGACTCGAGGAGGCAAATCTGGGTCACTCCAAAGTGGCTAGGGGAGAGTAATTGAGGAAACACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACACCCTAAGATCCTATATCTGGGTCCCTAAAGAACATAAAGAGTAATAGGGTGTATCCTGGGCCAGTTTAGGTCCTGGAT-CTGGGAGATGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGATTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAAAACAAGAACATTGGAGAGCCTGAATTTAGGTGGTTTCTCCAGGCAGATTAAGGACAGCT--GTTTGACCAGCTCTGGGGCTGCAGTGGCAGTCAGTTGGGCCCAGGG------------------------CCCGGGACATTCAGAGATTGGCGGTTCTCTGTCAGACCCCCAGAGGTCACACAG-GTTTCTG-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGTCTGGAATGGATGGGCATGTTGGGCAATA----------TCCCAAAGGCACATTGAGACCTGAGTGCTGGCCACTGTGCTGGGCTGGTGGACACAGGTGGGTCAGAAATCAGTGCTGCCCTGAGGGCAGGTGGGCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55009291 1010 + 59248254 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGTCCAGAGTGGGC----TGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAAccagtccagcagcacacccacctcgaccacctccagctctcccatcccgcccagcccagccAACTGTACCACGGTGAGGCCCCACGGGGCACGAGTACCTTGTGTTTCCAGCAGGGCTGGACTCGAGGAGGCAAATCTGGGTCACTCCAAAGTGGCTAGGGGAGAGTAATTGAGGAAACACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACACCCTAAGATCCTATATCTGGGTCCCTAAAGAACATAAAGAGTAATAGGGTGTATCCTGGGCCAGTTTAGGTCCTGGAT-CTGGGAGATGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGATTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAAAACAAGAACATTGGAGAGCCTGAATTTAGGTGGTTTCTCCAGGCAGATTAAGGACAGCT--GTTTGACCAGCTCTGGGGCTGCAGTGGCAGTCAGTTGGGCCCAGGG------------------------CCCGGGACATTCAGAGATTGGCGGTTCTCTGTCAGACCCCCAGAGGTCACACAG-GTTTCTG-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGTCTGGAATGGATGGGCATGTTGGGCAATA----------TCCCAAAGGCACATTGAGACCTGAGTGCTGGCCACTGTGCTGGGCTGGTGGACACAGGTGGGTCAGAAATCAGTGCTGCCCTGAgggcaggtgggcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47115558 1010 + 51301725 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGCCCAGAGTGGGC----TGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTccccccccAGCCACAGCCACATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACACCCACCTCGACCACCTCCAGCTCTCCCATCCCGCCCAGCCCAGCCAACTGTACCACGGTGAGGCCCCACGGGGCACGAGTACCTTGTGTTTCCAGCAGGGCTGGACTCGGGGAGGCAAATCTGGGTCACTCCAAAGTGGCTAGGGGAGAGTAATTGAGGAAACACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACACCCTAAAATCCTACATCTGGGTCCCTAACGAACATAAAGAGTAATAGAGTGTATCCTGGGCCAGTTTAGGTCCTGGAT-CTGGGAGATGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGATTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAAAACAAGAACATTGGAGAGCCTGAATTTAGGTGGTTTCTCCAGGCAGATTAAGGACAGCC--GTTTGACCAGCTCTGGGGCTGCAGTGGCAGtcagctgggcccaggg------------------------cccgGGACATTCAGAGATTGGCGGTTCTCTGTCAGACCCCCAGAGGTCACACAG-GTTTCTG-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGTCTGGAATGGATGGGCATGTTGGGCAATA----------TCCCAAAGGCACATTGAGACCTGAGTGCTGGCCACTGTGCTGGGCTGGTGGACACAGGTGGGTCAGAAATCAGTGCTGCCCTGAGGGCAGATGGGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46822765 1009 + 50890351 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGCCCAGAGTGGGC----TGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAAccagtccagcagcacacccacctcgaccacctccagctctcccatcccgcccagcccagccAACTGTACCACGGTGAGGCCCCACGGGGCACGA-TACCTTGTGTTTCCAGCAGGGCTGGACTCGAGGAGGCAAATCTGGGTCACTCCAAAGTGGCTAGGGGAGAGTAATTGAGGAAACACAGATCTTGGTATCCAGGGTCTAGGCTCTT-GGAGCACACCCTAAGATCCTACATCTGGGTCCCTAAAGAACATAAAGAGTAATAGGGTGTATCTTGGGCCAGTTTAGGTCCTGGAT-CTGGGAGATGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGATTCCCTGTTGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAAAACAAGAACATTGGAGAGCCTGAATTTAGGTGGTTTCTCCAGGCAGATTAAGGACAGCC--GTTTGACCAGCTCTGGGGCTGCAGTGGCAGTCAGTTGGGCCCAGGG------------------------CCCGGGACATTCAGAGATTGGCGGTTCTCTGTCAGACCCCCAGCGGTCACACAG-GTTTCTG-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGTCTGGAATGGATGGGTGTGTTGGGCAATA----------TCCCAAAGGCACATTGAGACCTGAGTGCTGGCCACTGTGCTGGGCTGGTGGACACAGGTGGGTCAGAAATCAGTGCTGCCCTGAgggcaggtgggcag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45400145 1019 + 49145316 GTTTCTCTATGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGTGGTGA---TGGTGGCACAGGA-AGTGAGGGCCCAGAGCAGGC--TGTGTGAGCCAGCTAAGCATGCCCTCCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACACCCACCTCGACCACCTCCAGCTCTCCCATCCCTCCCAGCCCAGCCAACTGTACCACGGTGAGGCCCCAGAGCGCACTAGTACCTCGTGTTTCTAGCAGGGCAGGACTTGAGGAG--AAATCTGGGTTTCTCCAAAGTGACCAGGGGAGAGTAGTTGAGGAAACACAGATCAAGGTAGCCAGGGTCTAGGCTCTT-GGAGCACACGCCAGGGTCCTACATCTGGGTCCCTCAAGGACACAAAGAATAATAGGGTCCATCCTGGGCCAGTTTAAGCCCTGGAT-GTGGGAGGCGGCAGGGGCCAGTGCCGGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTGGGATTCCCTGTGGACAGCAGGTTCCCAGATCCTTAGGAGGCTGGTGGCTCAGTGCTGGCTCCCAGAAAAC---AACATTGGAGAGCCTGAATT-GGGTGGTTTCTCCAGGCAGATTAAGGACAGCCATGTTTGCCCAGCTCTTGGGCTGCAGTGGCAGTCACCTGGGCCGAGGT-----------------------CCCCGGGACATTGAGAGATGAGTATTTCTCTGTCAGACCCCCAGATGTCATGCAG-GTTTCTA-TTCCACCTTCCCTCCCTCAGGAAAACTCTGAAGATGACAAGAAGAGGGGGCGTTCCACAGATAGTGAAGTCAGCCAGGTGGGTGTGAGCCTGGAATGGACGGGCATGCCATTCACTTATTTATTGGTTCCCAAAGGCATACTGAGGCCCGAGTGCTGGCCCCTGGGCTGGGCTCGTGGACACAGGTGGGCCAGAAAGCAGTGCTGCCCCAAGGGCAGGTGGGCAG i calJac3.chr22 M 1562 C 0 s mm10.chr7 3653384 951 + 145441459 ATTCCTCTATGACGACCTGGACCTCGAGGACATTCGTGAGGCCCTGG-GCTGACCTTCATGGCACAGAG-GGTGAGGGC----AGGAGGC-ATGGCTGTACCAGCTAAGCATGCTGCTCCCCTACCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGACGAGATCTTCAACCAGTCTAGCAGTACACCCACCTCAACAACCTCCAGCTCTCCCATCCCACCCAGCCCAGCAAACTGCACTACGGTAAGTGTCCAAGGT--------------TATTAATAAGAGGGTGGTCATGGAGGAGTCAAA---AGCCTAGTCT----TGCCTTAGAGAGGGCAGCTCAGGAAGTG-AGCTCTAGGCTT------TTTGTGCTCTGAGGAACGGATATAAAAA------ACCTGGGTTTC---------CACTCAGTTTTAGGGTGCACA-----------TGGGTCTTTGGTGGTGGTAGTCAGGAGGAGTTGGGGTGTGGAAAG-CTGAGGA-GCTGAGCAGCTGGGTGTCTCCCTTCTGACAGGGATCC-GGGGCCAAAGTCTATAAGGAAAGAAG--TCCTGGGTATGTCTCAGGATGG-GAGTGAGTGCTGACTCTCAGATT-----------------------TTTAGGTG--TTAACCAA--AACTTCAGGCTGAGT--ATTGGAGCAGCTCTGGAGC-ACAGGGCTACTCAGATGGGTCTATGAGAGACTGAGAGTAGTAAGGGCCCTCCTGTGTCCTTAAAGGATTGCC--CTCTGTTTTGGGACCCTGGAGGTCACAGAGTTTTTTTA-CTTCACTTCCCCTGCCTCAGGAAAACTCTGAAGATGATAAGAAGAGAGGCCGATCTACAGATAGTGAAGTCAGCCAGGTGGGTCCAAGTCTAAATCTGATGGTT-TGTAACTTGTTTATTGCGTGGTCTCCAAAGTTAC--TGAAGCTGGAGGGTTGGCCACGATGCTGGGCTCTTGGG-ACAGGTGTGCCAGAAA-CAGTGCTACTCTGAGGGTAGG------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19614329 738 - 122678785 GTTCCTCTATGACGATCTGGACCTCGAGGACATTCGTGAGGCCC-GGGGTTGGCC-TACGGGCATGGGGCAGTGAGGGC-CAGGTGGGACGGTGCCCGAGCCTGTTCAGCATGCCCCTCCCTGCTCCCAACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGTCATATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACACCCACCTCGACCACCTCCAGCTCTCCCATCCCACCCAGCCCGGCCAACTGCACCACGGT-------------------------------------------------GAGGAGGCA--------------------GCCCAGGGGAGGGGAACCAAGGAAGTG-GGGTCTTGGTGTCACGGG---------TT-GGAGC-------------------------------------------------------------------------------AT--------GCGGCAGAGGCCAGGCAGTGGG---------------GGGTGGCTCA-------------GGCAGGGATCC-AGGACTGGATTCCCTGAGGAGAGCAGGCTGCCAGGCCTGTGAGACGCTGGCAGG-GGGTGCTGGCTCCCAGGAGACAAGGACCCTGGG-------------------TCCCCCGATGAGGTTAAGGGCATAG--GTC---------------CCGCAGCAGC------------------------------------------CCTGGGAGCTTCAGAGATTGGAG--TCTCTGTTGGGGCCCTAGGGGTCACACAG-GTTTCCGACTGCTCCTCTCTCACTTCAGGAAAACTCTGAAGATGACAAGAAGAGAGGACGCTCAACAGATAGCGAAGTCAGCCAGGTAGGTGTGA------------CGGGCACATCAGTCTGCCATTGG-----CTCCCAGGGCTCACAAAGGCCTGAGTGCACCCCA---------------------AGGAAGGCCAGTA------GCCTTACTTAGGGCAGGTGTGGAG i canFam3.chr1 C 0 C 0 a score=613169.000000 s hg38.chr19_GL949747v2_alt 121654 227 + 729520 -ggcaagtggacaggtgactggtgCTGTGGTCAAGGGGGTAGCACACAGGTCACCCTTGGCCTGGCC-----AGGCAGTCAGGAGATGCTGCTGTGGAG-------TGCCCTGGGCTTCACAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGTGGCAGCCAGTAACATGGGCAAGTTGTGACAGAAAGTTT-----------------------------------------------------------------------------------------------GGAAGTGAGGAGAGATGAGTCTGGCCAGGTCTGCAGGGCCA-GGGCCCAAC------ s panTro4.chr19 59055619 226 + 63644993 -GGCAAGTGGACAGGTGACTGGTGCTGTGGTCAAGGGGGTAG--CACAGGTCACCCTTGGCCTGGCC-----AGGCAGTCAGGAGATGCTGCTGTGGAG-------TGCCCTGGGCTTCACAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGTGGCAGCCAGTAACATGGGCAAGTTGTGACAGAAAGCTT-----------------------------------------------------------------------------------------------GGAAGTGTGGAGAGATGAGTCTGGCCAGGTCTGCAGGGCCAGGGGCCCAAC------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55932367 226 + 60714840 -GGCAGGTGGGCAGGGGACTGGTGCTGTGGTCAAGGGGGTAG--CGCAGGTCACTCTCGGCCTGGCC-----AGGCAGTCAGGAGATGCTGCTGTGGAG-------TGCCCTGGGCTTCACAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGTGGCAGCCAGTAACATGGGCAAGTTGTGACAGAAAGCTT-----------------------------------------------------------------------------------------------GGAAGTGGGGAGAGATGAGTCTGGCCAGGTCTGCAGGGCCAGGGGCCCAAC------ i ponAbe2.chr19 I 502 C 0 s nomLeu3.chr10 102697545 226 - 106955855 -ggcaagtggacaggtgactggtgCTGTGGTCAAGGGGGTAG--CACAGGTCACCCTCGGCCTGGCC-----AGGCAGTCAGGAGAGGCTGCTGTGGAG-------TGCCCTGGGCCTCAGAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGTGGCAGCCAGTAACATGGGCAAGTTGTGACAGAAAGCTT-----------------------------------------------------------------------------------------------GGAAGTGTGGAGAGGTGAGTCTGGCCAGGTCTGCAGGGCCAGGGGCCCAAC------ i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59985586 224 + 64156825 -GGCAAGTGGACAGGTGACTGGTGCTGTGGTCAAGGGGGTGG--CACAGGTCACCCCCAGCCTGGCC-----AGGCAGTCAGGAGATGCTGCTGCGGAG-------TGCCCTGGGCTTGAGAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGCGGCAGCCAGTAACAAGGGGAAGTTGTGACAGAAAGCCT-----------------------------------------------------------------------------------------------GGAAGTGTGGAGAGATGG--CTGGCCTGGTGTGCAGGGCCAGGGCTCCAAC------ i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55010301 224 + 59248254 -ggcaagtggacaggtgactggtgCTGTGGTCAAGGGGGTGG--CACAGGTCACCCCCAGCCTGGCC-----AGGCAGTCAGGAGATGCTGCTGCGGAG-------TGCCCTGGGCTTGAGAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGCGGCAGCCAGTAACAAGGGGAAGTTGTGACAGAAAGCCT-----------------------------------------------------------------------------------------------GGAAGTGTGGAGAGATGG--CTGGCCAGGTGTGCAGGGCCAGGGCTCCAAC------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47116568 224 + 51301725 -GGCAAGTGGACAGGTGACTGGTGCTGTGGTCAAGGGGGTGG--CACAGGTCACCCCCAGCCTGGCC-----AGGCAGTCAGGAGATGCTGCTGTGGAG-------TGCCCTGGGCTTGAGAGTCAGGTGA--GTTTGCTTGGCAGGGAGAGGCGGCAGCCAGTAACAAGGGGAAGTTGTGACAGAAAGCCT-----------------------------------------------------------------------------------------------GGAAGTGTGGAGAGATGG--CTGGCCAGGTGTGCAGGGCCAGGGGTCCAAC------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46823774 224 + 50890351 -ggcaagtggacaggtgactggtgCTGTGGTCAAGGGGGTGG--CACAGGTCACCCCCAGCCTGGCC-----AGGCAGTCAGGAGATGCTACTGTGGAG-------TCCCCTGGGCTTGAGAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGCGGCAGCCAGTAACAAGGGGAAGTTGTGACAGAAAGCCT-----------------------------------------------------------------------------------------------AGAAGTGTGGAGAGATGG--CTGGCCAGGTGTGCAGGGCCAGGGGTCCAAC------ i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45401164 309 + 49145316 --GCAAGTGGACAGGTGACTGGTGCTGT-------GGAGTAG--CACAGGGCACCTCCAGCCCGGCC-----AGGCAGTCAGGAGATGCTGCTGCAGAG-------GGCCCTGGTTTTCAGAGTCAGGT----GTTTGCCTGGCAGGGAGAGGCAGAAG-CAGTAACACAGGCAGGTTG-GACAGAAAGCTCAGGAGTGTGGAGAGATGAGGGAGTGCGGGGAGACGCAGAGGAGCGCGGGGAGACGGGGGGGCGGCGGGGGGAGACGAGGTAGTGTGGAGAGAGGAGGAAGTGTGGAGAGATGAGGTGGGTCAGGTCTGTGGGGCCAGGGGCCCAAC------ i calJac3.chr22 C 0 C 0 s mm10.chr7 3654335 120 + 145441459 ------GT-----GATGACTGGTGGTGTGGTT---GAGGTGG-----------CCTGTTGTCTGGCTTATAGAGGAAGAC--TAGGTGGTACTGTGG-------------------------------------------------------------GCAGGTCACACAGGGAA-CTGTGGCAAGAAGTTA-----------------------------------------------------------------------------------------------GGAAGTAT-GAGAGGTGG--------------------------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19615067 215 - 122678785 GGCCAGGCAAGCAGGTGGCTGGTGCTGTGGTTGAGTGTGTGG--CATGGAGTA---GTGGCCTGGCCT----GGGTGGTCAGGAGACATTGCTCCAGAGAGACCCCTGCCCGTGACGTGGGGGGAAGACTATGGTTTACCAGGTGGGGAGAAGGGGGCG---------------------GGCAGACAGGTG-----------------------------------------------------------------------------------------------GGTGGTGTCCAAAGATGA--CCCACCTGGCT--CAGGCCGAGGGTCCCGCCCCCCAC i canFam3.chr1 C 0 I 99 a score=285356.000000 s hg38.chr19_GL949747v2_alt 121881 91 + 729520 TGTGAGCACAGGGACTGGGACTGTCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGAGTCCAATAAGCCTAGGAAGCGAT s panTro4.chr19 59055845 91 + 63644993 TGTGAGCGCAGGGACTGGGACTGTCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGAGTCAAATAAGCCTAGGAAGCGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55932593 91 + 60714840 TGTGAGCACAGGGACTGGGACTGTCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGAGTCAAATAAGCCTAGGAAGTGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102697771 91 - 106955855 TCTGAGCACAGGGACTGGGACTGTCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGAGTCAAATAAGCCTAGGAAGTGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59985810 91 + 64156825 TGTGAGCACAGGGACTGGGACTGTCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGAGCCAAACAAGCCTAGGAAGTGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55010525 91 + 59248254 TGTGAGCACAGGGACTGGGACTGTCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGAGCCAAACAAGCCTAGGAAGTGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47116792 91 + 51301725 TGTGAGCACAGGGACTGGGACTGTCAGGCTGAGCGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGATCCAAACAAGCCTAGGAAGTGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46823998 90 + 50890351 TGTGAGCACAGGGACTGGGACTGTGAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGCGGCCTCCAGAGCCAAACAAG-CTAGGAAGTGAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45401473 91 + 49145316 TATGAGCACAGGGACTGGAATTATCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGCAGCTTCTACTGCCAAACAAGCTTGGGAAGTGAT i calJac3.chr22 C 0 C 0 s mm10.chr7 3654455 57 + 145441459 -------------------GCTGTTGGACTGAG-------GACTCTTTGGTC--------TCTTGAGGACCCAAATAGCCTGAGAAGTGAT i mm10.chr7 C 0 C 0 e canFam3.chr1 19615282 99 - 122678785 I a score=1903203.000000 s hg38.chr19_GL949747v2_alt 121972 636 + 729520 GGG-----------GCCTTTGCTGTGCTGATAATACACACTGCAAATTTCTGAGAGGAGACGGTGGCGGGCAGTGCTTCT----------------------------TCAACTCCTTTAACATCTCCCAGGACAGGAGCACGCTTTCGGAAACGCTGCTACAGAACAATGTTAGGCAGGAGCAG---CATGGGCCTGAGGCCCCTCTGTGGGCTAACGGGATGGATGGTTCCAAG-GGGACACCCTGAGTGGGCATTGAGGAGGCTGGTGTGGAGACTAAGGGGACCCGCAGGTAGTAGTGAGGGCGGGCAACAGGGCCAGGAGGTGATGAGGAGAGACACTGAGGCAGGTACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCCCCC--ACTGCCAAGCAGCGATGCCCAGGAGAGAAGTGGGTAGTCAGTCCTGTTGGGCGCTTGGTAAGCGCAAGGTGCCTGTGGGGTGGCTGGAAAGAAGCCCAGGAGGTGGTTAGGCTCAGCAGCCGGAG-TGCTGTCCACAGATTGCCTGCGGTAGGGATACCATGA------GCACATTTACCCTCCCACCACTTTCTGGAGTGCTG--GTAACTTCCAGCCCTGTGAGTAGCTTCTGTGACCCTTCAGGTGACA-TTCAGAATTA-CTATCCAATTTCCAGCTG-------------------------------TTTTTCCTTCTAC s panTro4.chr19 59055936 636 + 63644993 GGG-----------GCCTTTGCTGTGCTGATAATACACACTGCAAATTTCTGAGAGGAGACGGTGGCGGGCAGTGCTTCT----------------------------TCAACTCCTTTAACATCTCCCAGGACAGGAGCACGCTTTCGGAAACGCTGCTACAGAACAATGTTAGGCAGGAGCAG---CATGGGCCTGAGGCCCCTCTGTGGGCTAACGGGATGGATGGTTCCAAG-GGGACACCCTGAGTGGGCATTGAGGAGGCTGGTGTGGAGACTAAGGGGACCCGCGGGTAGTAGTGAGGGCGGGCAGCAGGGCCAGGAGGTGATGAGGAGAGACACTGAGGTAGGTACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCCCCC--ACTGCCAAGCAGCGATGCCCAGGAGAGAAGTGGGTAGTCAGTCCTGTTGGGCGCTTGGTAAGCGCAAGGTGCCTGTGGGGTGGCTGGAAAGAAGCCCAGGAGGTGGTTAGGCTCAGCAGCCCGAG-TGCTGTCCGCAGATTGCCTGCGGTAGGGATACCATGA------GCACATTTACCCTCCCACCACTTTCTGGAGTGCTG--GTAACTTCCAGCCCTGTGAGTAGCTTCTGTGACCCTTCAGGTGACA-TTCAGAATTA-CTATCCAATTTCCAGCTG-------------------------------TTTTTCCTTCTAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55932684 633 + 60714840 GGG-----------GCCTTTGCTGTGCTGATAACACACACTGCAAGTTTCTGAGAGG-GACGGTGGCGGGCAGTGCTTCT----------------------------CCAACTCCTTTAACATCTCCCGGGACAGGAGCACGCTTTCGGAAACGCTGCTACAGAAGCATGTTAGGCAGGAGCAG---CATGGGCCTGAGGCCCCTCTGTGGGCTAATGGGATGGATGGTTCCAAG-GGGACACCCTGAGTGGGCATTGAGGAGGCTGTTGTGGAGACTGAGGGAACTCGCAGGTAGTAGTGAGGGCGGGCAGCAGGGCCAGGAGGTGATGAG--GACACACTGAGGCAGGTACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCCCCC--ACTGCCAAGCAGCGATCCCCAGGAGAGAAGTGGGTAGTCAGTCCTGTTGGGCTCTTAGTAAGCGCAAGGTGCCTGTGGGGTGGCTGGAAAGAAGCCCAGGAGGCGGTTAGGCTCGGCAGCCCGAG-TGCTGTCGGCAGGCTGCCTGCGGTGGGGATACCGTGA------GCACATTTACCCTCCCACCGCTTTCTGGAGTGCTG--GTAACTTCCAGCCCTGTGAGTAGTTTCTGTGACCCTTCAGGTGACA-TTCAGAATTA-CTATCCAATTTCCAGCTG-------------------------------TTTTTCCTTCTAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102697862 632 - 106955855 GGG-----------GCCTTTGCTGTGCTGATAACACACACTGCAAGTTTCTGAGAGGAGACGGTCGCGGGCAGTGTTTCT----------------------------CCAACTCCTTTAACATCTCCCAGGACAGGAGCACGCTTTCGGAAACGCTGCTACAGAAG-ATGTTAGGCAGGAGCAG---CATGGGCCTGAGGCCCCTCTGTAGGCTAATGGGATGGACAGTTCCAAG-GGGACATCCTGAGTGGGCATTGAGGAGGCTGGTGTGGAGACTAAGGGGACCCACAGGTAGTAGAGAGGGCGGGCAGCAGGGCCAGGAGGTGATGA---GAGACACTGAGGCAGGTACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCCCCC--ACTGCCAAGCAGCGATCCCCAGGAGAGAAATGGGTAGTCAGTCCTGTTGGGCACTTGGTAAGCGCAAGGTGCCTGTGGGGTGGCTGCAAAGAAGCCCAGGAGGCGGTTAGGCTCGGCAGCCCGAG-TGCTGTCGGCAGGCTGCCTGCGGTGGGGATACCATGA------GCACATGTACCCTCCCACCGCTTTCTGGAGTGCTG--GTAACTTGCAGCCCTGTGAGTAGTTTCTGTGACCCTTCAGGTGACA-TTCAGAATTA-CTATCCAATTTCCAGCTG-------------------------------TTTTTCCTTCTAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59985901 633 + 64156825 GGG-----------G-CTTTGCTGTGCTGATAACACACACTTCAAGTTTCTGAGAGGAGACGGTGGTGGGCAGTGCTTCT----------------------------CCAACTCCTTTAACATCGCCCAGGACAGGAGCCTGCTTTCGGAAATGCTGCTACAGAAGAATGTTAGGCAGGAGCAG---CGTGGGCCTGAGGCCCCTCTGTGGGCTAACGGGATGGATGGTTTCGAG-GGGACACCCTGAGTGGGCACTTAGGGGGCTGGCGTGGAGACTAAGACGACCCGCGGGTAGTAGGGAGGGCGGGCAGCAGGGCCAGGAGGCGATGAGGAGAGACACTGAGGCAGATACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCTCCC--ACTGCCAAGCAGCGAT-CCCAGGAGAGAAGTGGTTAGTCAGTCCTGTTGGGCGCTTGGTAAGCGCAGGGAGTCTGTGGGGTGGCTGGAAAGAAGTGCAGGAGGTGGTTAGGCTCAGCAGCCTGAG-TGCTGTCGGCAG-CTGCCTGCAGTGGGGATACCATGA------GCACATTTACCCTCCCACCACTTTCTGGAGTGCTG--GTAACTTACAGCCCTGTGAGTAGTTTCTATGACCCTTCAGGTGATG-TTCAGAATTA-CTATCCAATTTCTAGCTG-------------------------------TTTTTCCTTCTAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55010616 633 + 59248254 GGG-----------G-CTTTGCTGTGCTGATAACACACACTTCAAGTTTCTGAGAGGAGACGGTGGTGGGCAGTGCTTCT----------------------------CCAACTCCTTTAACATCGCCCAGGACAGGAGCCTGCTTTCGGAAATGCTGCTACAGAAGAATGTTAGGCAGGAGCAG---CGTGGGCCTGAGGCCCCTCTGTGGGCTAACGGGATGGATGGTTTCGAG-GGGACACCCTGAGTGGGCACTTAGGGGGCTGGCGTGGAGACTAAGACGACCCGCGGGTAGTAGGGAGGGCGGGCAGCAGGGCCAGGAGGCGATGAGGAGAGACACTGAGGCAGATACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCTCCC--ACTGCCAAGCAGCGAT-CCCAGGAGAGAAGTGGTTAGTCAGTCCTGTTGGGCGCTTGGTAAGCGCAGGGAGCCTGTGGGGTGGCTGGAAAGAGGTGCAGGAGGTGGTTAGGCTCGGCAGCCTGAG-TGCTGTCGGCAG-CTGCCTGCAGTGGGGATACCATGA------GCACATTTACCCTCCCACCACTTTCTGGAGTGCTG--GTAACTTACAGCCCTGTGAGTAGTTTCTGTGACCCTTCAGGTGACG-TTCAGAATTA-CTATCCAATTTCTAGCTG-------------------------------TTTTTCCTTCTAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47116883 634 + 51301725 GGG-----------GCCTTTGCTGTGCTGATAACACACACTTCAAGTTTCTGAGAGGAGACGGTGGTGGGCAGTGCTTCT----------------------------CCAACTCCTGTAACATCGCCCAGGACAGGAGCCTGCTTTCGGAAACGCTGCCACAGAAGAATGTTAGGCAGGAGCAG---CGTGGGCCTGAGGCCCCTCTGTGGGCTAACGGGATGGACGGTTTCGAG-GGGACACCCTGAGTGGGCACTgggggggCTGGCGTGGAGACTAAGACGACCCGCAGGTAGTAGGGAGGGCGGGCAGCAGGGCCAAGAGGTGATGAGGAGAGACACTGAGGCAGATACTccaggggccaggctgggctctgccACCTTCCCAGCCTCCC--ACTGCCAAGCAGCGAT-CCCAGGAGAGAAGTGGTTAGTCAGTCCTGTTGGGCGCTTGGTAAGCGCAGGGAGCCTGTGGGGCGGCTGGAAAGAAGTGCAGGAGGTGGTTAGGCTCGGCAGCCTGAG-TGCTGTCGGCAG-CTGCCTGCAGTGGGGATACCATGA------GCACATTTACCCTCCCACCACTTTCTGGAGTGCTG--GTAACTTACAGCCCTGTGAGTAGTTTCTGTGACCCTTCAGGTGATG-TTCAGAATTA-CTATCCAATTTCTAGCTG-------------------------------TTTTTCCTTCTAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46824088 634 + 50890351 GGG-----------GCCTTGGCTGTGCTGATAACACACACTTGAAGTTTCTGAGAGGAGACGGTGGTGGGCAGTGCGTCT----------------------------CCAACTCCTTTAACATCGCCCAGGACAGGAGCCTGCTTTCGGAAATGCTGCTACAGAAGAGTGTTAGGCAGGAGCAA---CGTGGGCCTGAGGCCCCTCTGTGGGCTAATGGGATGGACGGTTTCAAG-GGGACACCCTGAGTGGGCACTGAGGGGGCTGGCGTGGAGACCAGGACGACCCGCAGGTAGTAGGGAGGGCGGGCAGCAGGGCCAGGAGGTGATGAGGAGAGACACTGAGGCAGATACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCTCCC--ACTGCCAAGCAGCGAT-CCCAGGAGAGAAGTGGTTAGTCAGTCCTGTTGGGCGCTTGGTAAGTGCAGGGAGCCTGTGGGGTGGCTGGAAAGAAGTGCAGGAGGTGGTTAGGCTCAGCAGCCTGAG-TGCTGTCGGCAG-CTGCCTGCAGTGGGGATACCATGA------GCACATTTACCCTCCCACCACTTTCTGGAGTGCTG--GTAACTTACAGTCCTGTGAGTAGTTTCTATGACCCTTCAGGTGATG-TTCAGAATTA-CTATCCAATTTCTAGCTG-------------------------------TTTTTCCTTCTAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45401564 635 + 49145316 GGG-----------GCCTTGGTGGTGCGAGTAACACACACTGCGTGTTTATGAGAGAAGACGGTGGTGTGCAGTGCTTCT----------------------------CTACCTCCCCTAACATCTCCCAGGACAGCAGCA-GCTTCAGAAAACGCTGCTACAGAAGAATGTTAGGCAGGAGCAG---CCGGGGCCTGAGGCCCCTCTGTGGGCTGATGGGATGCATGGTTCCAAG-GGGACACCCTGAGTGGACATTGAGGAGGCTGGTGTGGAGACTAAGGGGACCTGCAGGTAGTGGGGAAGGTAGGCAGCAGGGCCAGGTGGTGATGAAAAGAGACGCCAAGGTAGGGACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGTCCCC--ACCGCCAAGCAGCGAT-CCTAGGAGAGAAGTGGGTAGTCAGTCCTGCTGGGCGCCTGGTAAGCGCAGGGTACCCGTGGGGTGGGTGGAAAGAAGC-CAGGAGGCGGTTAGGTTCAGCAGCCTGAGCTGCTGTTGGCAGCATGCCTGTGGCGGAGATGCCAGGA------GCACGTTTACCCTCCCACCACTTTCGGGAGCGCTG--GTAATTTACGACCCTGTGAGTAGTTTCTCTGACCCTTCCGGTGGCATTTCAGAAGTG-CCATCCAATTTCCAGCTG-------------------------------TTTTTCCTTCTAC i calJac3.chr22 C 0 C 0 s mm10.chr7 3654512 633 + 145441459 CAGAAAGTCAGACTGCCTGTGCTGCACTGACTGCAGGAAGCAC---TTCCTGAGAGAGGAAGGCAGTATGCGGCACTTCTGAATTCCTTTAGATCCTAATGAATAAACTCAGCTCTGTCAATTTCTCCTACAATAAGAACATATCTTAGGAGAC----------AAGAATGTT--GTTGAAGAAG---C-----CCAGAATTCCTT---TAGGCTAATAGAAAGGACAGTCTCCAGTGGGAGGACCTAAGTGCACACTAATGAAGCTAATTTGGGGACCAGG----------------------GTTTAGGAGCA--GCCAG--AGTAATGGAGTGAGGAGGTGGGGCAAGGAATCATGGGGGTGGGCTTAGTTCTGCCACCTTATCAGGCCCCTTGACTGTCAAGCAGAAGT-CCCAGGAAAAATGTGAATGGCCAGTTTTCTTTGTGATTT----------------TTGTGTGGTGGTC----AGAAGGCTAGGAGGCAGTTTGGCATGGCAGCCTGGT-TGTTGG----AGCGTAGTTTAAGTAGGGATGCCCTGGAGCACTGCATTTTTACAGTTTCATGATTAGCTGACATTCGGAAGGAATTGATTGTCCTAG-------TTCCCTTACGCTTAA----ACA-TTTAGGCTGATCCAACTAATTGCAAATTGAGGTTGGGATTTTTGTTTTTGTTTGTGTTGtttgtttcttttac i mm10.chr7 C 0 I 53 s canFam3.chr1 19615381 383 - 122678785 TGG-----------GTCTTGGCTGTGCTAGTGATGGACATCATGGACTTCCGAGAGGGGA-----------GGCACTTCT-----------------------------CAGGCCGTCTGTGTTCCCCCA------------------GTGAACCCTGT-------GGATCTGGGACGGGAGCTGGTCCTCGAACCAGGGTCC-----------------------TAGTTAGGGA-GGAGCCTGGTGGGAGGGCACCGGTAGGGCTGCTGTAGGCCCTGGG-----------------GGGGGGG---------GGGCCAGGAACCAGTTGG--------------------------------------------------TCTCATAATCCC---TTGACATGTGGCATG---------------------------------------------------------TGTGAGGTG--------------TGGGGAGCAGTTAGCTGC------------CACTGT------------------------GCCCTGG------GCGTG-------TCACTCTGCTCTCTAG-GTAGTG--GTCATCAGCAGCCCTTCAAGTAGCTTTTGTGACCCTTGAAGTGACA-TTCAGGACTG-CTGTCCAATTT--AGATT-------------------------------TTTTTTCTTC--- i canFam3.chr1 I 99 C 0 a score=69762.000000 s hg38.chr19_GL949747v2_alt 122608 22 + 729520 TCTTGGACATTAGGCGGCTCCA s panTro4.chr19 59056572 22 + 63644993 TCTTGGACATTAGGCGGCTCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55933317 22 + 60714840 TCTTGGACATTAGGCGGCTCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102698494 22 - 106955855 TCTTGGACATTAGGCAGCTCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59986534 22 + 64156825 TCTTGGACATTAAGCTGCTCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55011249 22 + 59248254 TCTTGGACATTAAGCTGCTCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47117517 22 + 51301725 TCTTGGACATTAAGCTGCTCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46824722 22 + 50890351 TCTTGGACATTAAGCTGCTCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45402199 22 + 49145316 TCTTAGACGTTAGGCTGCTCCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19615764 20 - 122678785 TCTTGGAC--TCAGCTGGTTGG i canFam3.chr1 C 0 C 0 e mm10.chr7 3655145 53 + 145441459 I a score=7231605.000000 s hg38.chr19_GL949747v2_alt 122630 2004 + 729520 GCTAATCTCATATT----GAGAA--------------CACTTAAGTGTT--------------------TCCCACTAGTCCTCTGGCTTCCAACAGATG-GATCTTCTCTGGCTGAC-------AACCTAAGTTGTGTGTCAGATCCCTGTGGGGGTGTCCAT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAGGCTGGAAATCAGTGTGAGTGTTTTAAGCATGAAGGTG---ATTGAAGCCATGAGGGTGAGTAAGGTCACCCAGGT------CCCCAAGAGGGCAGGAGCAGGTGGG--GGCAGCGAGGCCAGAGAGGAGGCTGCTGGGACA--AAGATGGAGCCTGAG------GTGGGGGTGGTGA--GGGAGACCAGCTGGCCCACTGGGTCCTGACCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAATGGGGTCCCCGCCCCCGCAGCACCCCCAAGTGCCCTGGGCCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCTCCCTATGCCCAGGCTGTGGCCCCACCAGCTCCCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGTCCAGCCTAgcggaggcggaggcggcggcagcggaggtggaggGAGCAGCAGCAGTAGTAACAG--CAGTGCCGGTGGAGGGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGAGGAGGCAGCGGGGTGGGGGGCGTGGGCGGGGCTGGGCAGCAGGCAGCAGCCC-TTTCCA-TTTACTCTT--TGTTCCCAGGTTACAGCTCAGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCTTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCGGCAGGGTTGGGATGGCAGCCTTTTGAAACAGAGAGGCGCAGGCGCCTCACCCCCGCATCGGTGGGTTCTGAA-CCCCCCGCCCTTGCTGCTGGGAATGGC---CAAGCGCTA------TCCTCCATCTCCCTCGGGTGTT-ACACCCCCACTTCTTTCCAGCAAGGAAAC----TACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAATACGTTCTCATCTAAGTGGAAGTTTTCTCAAGAGCCCCATACCCTTTCCTCCCCATTTCTGTTACCTGCCTGAGGC-CAATTGACTGCCACCGGAGGGTCACTGTTTCACTTTTCAAAGTGAATTGTCCCGAAGTCCTTATTCCTCTGCAGCCACTCCTTCAAATCTTAGCTCAGACCATTCCACTGGGTCTGCCTGTTTCCCGAAGAATGCCCTAAGAAAGAT---------CAGTGTGCACAAAGGAAAGGCCTGCTTCCT------GCCCCCTCACCCCAGCTCCAGCTGGCCTGCCCAAGGGG------GAGTGGGCCC--TGTGAACACCTGCCCAGG----------GCAAGTGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCGAGAATCCTCACC-CCCACCCCCACAGCTCTGCTCTGCTGATGAGAAACCATTCCAAAGATTGGGCTCTGCCTTTGTTTGCCCAGAGAACCACTTCTTTCTCCCATCTGTCTGCCCTCACCTGCCCCTCTCAGATCCCATCTGATCTGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCATCCCACCCTCAGGGA-CCC---TCCTCTCAACCCC-CTCTTCCATGCTCTCTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACGGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTGCTCAATGGGCCTCCACAGTTCAGCACCGCCCCAGAAATCAAGGTGGGCTCCTCGGACAT--CCCCCGAGCC-----------------------------------------------------------------------------------------T s panTro4.chr19 59056594 2093 + 63644993 GCTAATCTCATATT----GAGAA--------------CACTTAAGTGTT--------------------TCCCACTAGTCCTCTGGCTTCCGACAGATG-GATCTTCTCTGGCTGAC-------AACCTAAGTTGTGTGTCAGATCCCTGTGGGGGTGTCCAT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAGGCTGGAAATCAGTGCGAGTGTTTTAAGCATGAAGGTG---ATTGAAGCCATGAGGGTGAGTAAGGTCACCCAGGT------CCCCAAGAGGGCAGGAGCAGGTGCG--GGCAGCGAGGCCAGAGAGGAGGCTGCTGGGACG--AAAATGGAGGCTGAG------GTGGGGGTGATGA--GGGAGACCAGCTGGCCCACTGGGTCCTGACCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAATGGGGTCCCCGCCCCAGCAGCACCCCCAAGTGCCCTGGGCCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCTCCCTATGCCCAGGCTGTGGCCCCACCAGCTCCCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGTCCAGCCTAgcggaggcggaggaggcggcagcggaggcggagggagcagcagcagtagtaacag--cagtgccggtggaggGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGCGGGGTGGGGGGCGTGGGCGGGGCTGGGCAGCAGGCAGCAGCCC-TTTCCA-TTTACTCTT--TGTTCCCAGGTTACAGCTCAGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCTTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCGGCAGGGTTGGGATGGCAGCCTTTTGAAACAGAGAGGCGCAGGCGCCTCACCCCCGCATCGGTGGGTTCTGAA-CCCCCCGCCCTTGCTGCTGGGAATGGC---CAAGCGCTA------TCCTCCATCTCCATCGGGTATT-ACACCCCCACTTCTTTCCAGCAAGGAAAC----TACATCAGCCTCCCTGCTTTGCCCTTAAGAACATTCTAAAATACGTTCTCATCTAAGTGGAAGTTTTCTCAAGAGCCCCATACCCTTTCCTCCCCATTTCTGTTACCTGCCTGAGGC-CAACTGACTGCCACCGGAGGGTCACTGTTTCACTTTTCAAAGTGAATTGTCCCGAAGTCCTTATTCCTCTGCAGCCACTCCTTCAAATCTTAGCTCAGACCATTCCCCTGGGTCTGCCTGTTTCCCGAAGAATGCCCTAAGAAAGAT---------CAGTGTGCACAAAGGAAAGGCCTGCTTCCT------GCCCCCTCACCCCAGCTCCAGCTGGCCTGCCCAAGGGG------GAATGGGCCC--TGTGAACACCTGCCCAAG----------GCAAGTGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCGACAGTCCTCACC-CCCACCCCCACAGCTCTGCTCTGCTGATGAGAAACCATTCCAAAGATGGGGCTCTGCCTTTGTTTGCCCAGAGAACCACTTCTTTCTCCCATCTGTCTGCCCTCACCTGCCCCTCTCAGATCCCATCTGATATGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCATCCCACCCTCAGGGA-CCC---TCCTCTCAACCCC-CTCTTCCATGCTCTCTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACGGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTGCTCAATGGGCCTCCACAGTTCAGCACCGCCCCGGAAATCAAGGTGGGCTCCTCGGACAT--CCCCCGAGCCTCTGTGTCCTGACTCTGTTGTTTCTTTCCTCCAGGTCTCTAGCTGCACCCCCTGCCCCCACCCTCTTTCTGGATCTCTTTCTCTGGCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55933339 1995 + 60714840 GCTAATCTCAGATT----GAGGA--------------CACTTAGGTGTG--------------------TCCCATTAGTCCCCTGGCTTCCAACAGATG-GGTCTTCTCTGGCTGAC-------AACCTAAGTTGTGTGTCAGATCCCTGTGGGGGTGTCCGT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAGGCTGGAAATCAGTGTGAGTGTTTTAAGCATGAAGGCG---ATTGAAGCCATGAGGGTG----AGGTCACCCAGGT------CCCCAAGAGGGCAGGGGCAGTTGGG--GGCAGCGAGGCCAGAGAGGAGGCTGCTGGGACG--AAAATGGAGCCTGAG------GTGGGGATGGTGA--GGGAGACCAGCTGGCCCACTGGGTCCTGACCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAATGGGGTCCCCGCCCCAGCAGCACCCCCAAGTGCCCTGGGCCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCTCCCTATGCCCAGGCTGTGGCCCCACCAGCTCCCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGTCCAGCCTAgcggaggcggtggaggcggcggcggaggcggagggagcggcagcAATAGTAACAGCACAGTGCCGGTGGAGGGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGTGGGGTGGGGGGCATGGACGGGGCTGGGCCGCAGGCAGCAGCCC-TTTCCA-TTTACTCTT--TGTTCCCAGGTTACAGCTCAGTTGTGGCAGACAGCCCAGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCCTGGGCCCCCCTTCTGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCGGCAGGGTTGGGGTGGCAGCCTTTCGAAACAGAGAGGCACTGGTGCCTCACCCCTGCATCGATGGGTTCTGAA-CCACCCGCCCTTGCTGCTGGGAATGGC---CGAGCGCTA------CCCTCCACCTCCGTCGGGTGTT-ACACCTCCACTTCTTTCCAGCAAGGAAAC----TACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAATACGTTCTCATCTAAGTGGAAGTTTTCTCAAGAGCCCCATACCCTTTCCTCCCCATTTCTGTTACTTGCCTGAGGC-CACTTGACTGCCACCGGAGGGTCACTGTTTCACTTTTCAAAGTGAATT--------GTCCTCATTCCTCTGCAGCCACGCCTCCAAATCTTAGCTCAGACCATTCCACTGGGTCTGCCTGTTTCCTGAAGAATGCCCTAAGAAAGAT---------TAATGTGCACAAAGGAAAGGCCTGCTTCCCG-----GCCCCCTCACCCTAGCTCCAGCTAGCCTGCCCAAGGGG------GAGTGGGCCC--TGTGAACACCTGCCCAAG----------GCAAGTGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCAAGAATCCTCACC-CCCACCCCCACAGCTCTCCTCTGCTGATGAGAAACCATTCCAAAGATTGGGCTCTGCCTTTGTTTGCCCAGAGAACCACTTCTTTCCCCCATCTGTCTACCCTCAGCTGCCCCTCTCAGATCCCATCTGATCTGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCATCCCACCCTCAGGGA-CCC---TCCTCTCAACTCC-CTCTTCCATGCTCTCTCTCCAGGAAGGAACCCAGTGCAGCAGCCCCAACGGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGCGATGCCAAGGCAGCCGGTGCCCTGCTCAATGGGCCTCCACAGTTCAGCACCGCCCCGGAAATCAAGGTGGGCTCCTAGGACGT--CCCCCGAGCC-----------------------------------------------------------------------------------------T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102698516 1994 - 106955855 GCTAATCTCATATT----GAGGA--------------CACTTAGGTGTT--------------------TCCCTCTAGTCCCCTGGCTTCCAACAGATG-GATCTTCTCTGG-TGAC-------AACCtaagttgtgtgtcagatccctgtgggggtgtccat-ggggcggtgtccagacaggacttggga-agctgg---gcaggctggaaatcagtgtgagtgttttaagcatgaaggtg---attgaagccatgagggtgagtaaggtcacccaggT------CCCCAAGAGGGCAGGAGCAGTTGGG--GGCAGCGAGGCCAGAGAGGAGGCTGCTGGGACG--AAAATGGAGCCTGAG------GTGGGG-TGGTGA--GGGAGACCTGCTGGCCCACTGAGTCCTGACCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAATGGGGTCCCCGCCCCAGCAGCACCCCCAAGTGCCCTGGGCGCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCTCCCTATGCCCAGGCTGTGGCCCCACCAGCTCCCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGTCCAGTCTAGCggaggcggtggaggcggcggcggaggcggaggGAGCGGCAGCAATAGTAACAG--CAGTGCCAGTGGAGGGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGCGGGGTGGGGGGCATGGGCGGGGCTGGGCAGCAGGCGGCAGCCC-TTTCCA-TTTACTCTT--TGTTCCCAGGTTACAGCTCCGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCCTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCGGCAGGGTTGGGATGGCAGCCTTTCGAAACAGAGAGGCGCTGGTGCCTCACCCCCACATCGATGGGTTCTGAG-CCCCCCGCCCCTGCTGCTGGGAATGGC---CGAGCGCTA------TCCTCCACCTCCGTTGGGTGTT-ACACCCCCACTTCCTTCCAGCAAGGAAAC----TACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAATACATTCTCATCTAAGTGGAAGTTTTCTCAAGAGCCCCATACCCTTTCCT-CCCGTTTCTGTTACCTGCCTGAGGC-CACTCGACTGCCACCGGAGGGTCACTGTTTCAC-TTTCAAAGTGAATTGTCCTGAGGTCCTCATTCCTCTGCAGCCACTCCTCCAAATCTT-----AGACCATTCCACTGGGTCTGCCTGTTTCCTGAAGAATGCCCTAAGAAAGAT---------CAATGTGCACAAAGGAAAGGCCTGCTTCCCG-----GCCCCCTCACCCCAGCTCCAGCTGGCCTGCCCAAGGGG------GAGTGGGCCC--TGTGAACACCTGCCCAAG----------GCAAGGGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCGATAATCCTCACC-CCCACCCCGACAGCTCTGCTCTGCTGATGGGAAACCATTCCAAAGATGGGGCTCTGCC--TGTTTGCCCAGAGAACCACTTCTTTCTCCCATCTGTCTACCCTCAGCTGCCCCTCTCAGATCCCATCTGATCTGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCACCCCACCCTCAGGGA-CCC---TCCTCTCAACCCC-CTCTTCCATGCTGTCTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACAGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCTAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTGCTCAATGGGCCTCCACAGTTCAGCACTGCCCCGGAAATCAAGGTGGGCTCCTCGGACAT--TCCCCGAGCC-----------------------------------------------------------------------------------------T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59986556 1989 + 64156825 GCTAATCTCATATT----GAGGA--------------CATTTAGGTGTT--------------------TCCCACTAGTCCCCTGGCTTCCAACAGATG-GATCTTCTCTGGCTGCC-------AACCTAAGTTGTG-GTCAGATCCCTGTGGGGGTGTCCGT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAGGCTGGAAATCAGTGTGAGTGTTTTAAGCATGAAGGTG---ACTGAAGCCATGAGGGTGAGTAAGGTCACCCAGGT------TCCCAGGAGGGCGGGAGCAGTTGGG--GGCAGCAAGGCCAGAGAGGAGGCTGCTGGGACG--AAAATGGAGCCTGAG------GTGGGGGTGGTGA--GGGAGACCAGCTGGCCCACTGGGTCCTGATCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAACGGGGTCCCCGCCCCAGCAGCACCCCCAAGTGCCCTGGGTCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCCCCCTATGCCCAGGCTGTGGCCCCATCGGCTACCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGCCCAGCCTggcggaggt------ggcggcggcggaggtggagggagcggcagcaatagtaacag--cagtgccggtggaggGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGCGGGGT---GGGCATGGGCGGGGCTGGGCAGCCGCCGGCAGCCC-TTCCCATTTTATTCTT--TGTTCCCAGGTTACAGCTCAGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCCTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCAGCAGGGTTGGGATGGCGGCCTTTCGGCACAGAGAGGCGCTGGTGCCTCACCCCTGCATCAGTGGGTTCTGGG-TCCCCCGCCCTTGCTGCTGGGAATGTC---CGAGCACTG------TCCTCCACCTCTGTCGGGTGTTAACACCCCCACTTCTTTCCAGCACGGAAAC----TACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAATATGTTCTCATCTAAGTGGAAGTTTTCTCAAGAACCCCATACCCTTTCCTCCCCATTTCTGTTACCTGCCCAAGGG-TACTTGATTACCACTGGAGGGTCACTGTTCCACTTTTCAAAGTGAATTGTCTCGAAGTCCTCGTTCCTCTGCAGCCACTCCTCCAAATCTTAGCTCAGACCATTCCCCTGTGTCCGCCTGTTTCCCGAAGACTGCCCCAAGAAAGAT---------CAGTGTGCACAAAGGAAAGGCCTGCTTCCTG-----GTCCCCTCACCCCAGCTCCAGCTGGCCTGCCCAAGAGG------GAATGGGCCC--TGCGTCCACCTGCCCAAG----------GCAGCTGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCGAGAATCCTCACT-CCCACCCCCGCAGCTCTGCTCTGCTGATGAGAAACCATTCCAAAGATTGGGTTCTGCCTTTGTTTGCCCAGAG-----CCACTTTCTCCCATCTGTCTACCCTCAGCCGCCCCTCTCAGATCCCATCTGATGTGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCATCCCACCCTCAGGGG-CCC---TCCTCTCAACCCCTCTCTTCCATG----CTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACAGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTACTCAATGGGCCTCCACAGTTCAGCACCGCCCCGGAAATCAAGGTGGGCTCCTTGGACAT--CCCCCGAGCC-----------------------------------------------------------------------------------------T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55011271 1989 + 59248254 GCTAATCTCATATT----GAGGA--------------CATTTAGGTGTT--------------------TCCCACTAGTCCCCTGGCTTCCAACAGATG-GATCTTCTCTGGCTGCC-------AACCTAAGTTGTG-GTCAGATCCCTGTGGGGGTGTCCGT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAggctggaaatcagtgtgagtgttttaagcatgaaggtg---actgaagccatgagggtgagtaaggtcacccaggT------TCCCAGGAGGGCGGGAGCAGTTGGG--GGCAGCAAGGCCAGAGAGGAGGCTGCTGGGACG--AAAATGGAGCCTGAG------GTGGGGGTGGTGA--GGGAGACCAGCTGGCCCACTGGGTCCTGATCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAACGGGGTCTCCGCCCCAGCAGCACCCCCAAGTGCCCTGGGTCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCCCCCTATGCCCAGGCTGTGGCCCCATCGGCTACCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGCCCAGCCTggcggaggt------ggcggcggcggaggtggagggagcggcagcAATAGTAACAG--CAGTGCCGGTGGAGGGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGCGGGGT---GGGCATGGGCGGGGCTGGGCAGCCGCCGGCAGCCC-TTCCCATTTTATTCTT--TGTTCCCAGGTTACAGCTCAGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCCTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCAGCAGGGTTGGGATGGCGGCCTTTCGGCACAGAGAGGCGCTGGTGCCTCACCCCTGCATCAGTGGGTTCTGGG-CCCCCCGCCCTTGCTGCTGGGAATGTC---CGAGCACTG------TCCTCCACCTCTGTCGGGTGTTAACACCCCCACTTCTTTCCAGCACGGAAAC----TACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAATATGTTCTCATCTAAGTGGAAGTTTTCTCAAGAACCCCATACCCTTTCCTCCCCATTTCTGTTACCTGCCCAAGGG-TACTTGATTGCCACTGGAGGGTCACTGTTCCACTTTTCAAAGTGAATTGTCTCGAAGTCCTCGTTCCTCTGCAGCCACTCCTCCAAATCTTAGCTCAGACCATTCCCCTGTGTCCGCCTGTTTCCCGAAGACTGCCCCAAGAAAGAT---------CAGTGTGCACAAAGGAAAGGCCTGCTTCCTG-----GTCCCCTCACCCCAGCTCCAGCTGGCCTGCCCAAGAGG------GAATGGGCCC--TGCGTCCACCTGCCCAAG----------GCAGCTGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCGAGAATCCTCACT-CCCACCCCCGCAGCTCTGCTCTGCTGATGAGAAACCATTCCAAAGATTGGGTTCTGCCTTTGTTTGCCCAGAG-----CCACTTTCTCCCATCTGTCTACCCTCAGCCGCCCCTCTCAGATCCCATCTGATGTGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCATCCCACCCTCAGGGG-CCC---TCCTCTCAACCCCTCTCTTCCATG----CTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACAGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTACTCAATGGGCCTCCACAGTTCAGCACCGCCCCGGAAATCAAGGTGGGCTCCTTGGACAT--CCCCCGAGCC-----------------------------------------------------------------------------------------T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47117539 1989 + 51301725 GCTAATCTCATATT----GAGGA--------------CATTTAGGTGTT--------------------TCCCACTAGTCCCCTGGCTTCCAACAGATG-GATCTTCTCTGGCTGAC-------AACCTAAGTTGTG-GTCAGATCCCTGTGGGGGTATCCGT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAGGCTGGAAATCAGTGTGAGTGTTTTAAGCATGAAGGTG---ACTGAAGCCATGAGGGTGAGTAAGGTCACCCAGGT------TCACAGGAGGGCGGGAGCAGCTGGG--GGCAGCAAGGCCAGAGAGGAGGCTGCTGGTACG--AAAATGGAGCCTGAG------GTGGGGGTGGTGA--GGGAGACCAGCTGGCCCACTGGGTCCTGATCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAACGGGGTCCCTGCCCCAGCAGCACCCCCAAGTGCCCTGGGCCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCCCCCTATGCCCAGGCTGTGGCCCCATCGGCTACCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGCCCAGCCTggcggaggc------ggcggcggcggaggtgGAGGGAGCGGCAGCAATAGTAACAG--CAGTGCCGGTGGAGGGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGCGGGGT---GGGCATGGGCGGGGCTGGGCAGCCGCCGGCAGTCC-Ttcccattttattctt--tgttcccAGGTTACAGCTCAGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCCTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCAGCAGGGTTGGGATGGCGGCCTTTCAGCACAGAGAGGCGCTGGTGCCTCACCCCTGCATCAGTGGGTTCTGGG-CCCCCCGCCCTTGCTGCTGGGAATGTC---TGAGCACTG------TCCTCCACCTCTGTCGGGTGTTAACACCCCCACTTCTTTCCAGCATGGAAAC----GACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAACGTGTTCTCATCTAAGTGGAAGTTTTCTCAAGAGCCCCATACCCTTTCCTCCCCATTTCTGTTACCTGCCCAAGGC-TACTTGACTGCCACTGGAGGGTCACTGTTCCACTTTTCAAAGTGAATTGTCTCGAAGTCCTCATTCCTCTGTAGCCACTCCTCCAAATCTTAGCTCAGACCATTCCACTGTGTCCGCCTGTTTCCCGAAGACTGCCCCAAGAAAGAT---------CAGTGTGCACAAAGGAAAGGCCTGCTTCCTG-----GTCCCCTCACCCCAGCTCCAGCTGGCCTGCCCAAGAGG------GAATGGGCCC--TGTGTCCACCTGCCCAAG----------GCAGCTGGTTTTG-------------ATCAGCCTGTGACCTGGT---------------------GGAGCACCCGATAATCCTCACT-CCCACCCCCGCAGCTCTGCTCTACTGATGAGAAACCATTCCAAAGATTGGGTTCTGCCTTTGTTTGCCCAGAG-----CCACTTTCTCCCATCTGTCTACCCTCAGCCGCCCCTCTCAGATCCCATCTGATGTGTGCAGtctcccctctctccagccaggcctctctgcccatcccaccctcagggg-ccc---tcctctcaacccctctctTCCATG----CTCTCCAGGAAAGAACCCAGTGCGGCAGCCCCAACAGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTACTCAATGGGCCTCCACAGTTCAGCACCGCCCCGGAAATCAAGGTGGGCTCCTTGGACAT--CCCCCGAGCC-----------------------------------------------------------------------------------------T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46824744 1984 + 50890351 GCTAATCTCATATT----GA-GA--------------CATTTAGGTGTT--------------------TCCCACTAGTCCCCTGGCTTCCAACAGATG-GATCTTCTCTGGCTGAC-------AACCTAAGTTGTG-GTCAGATCCCTGTGGGGGTGTCCGT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAggctggaaatcagtgtgagtgttttaagcatgaaggtg---actgaagccatgagggtgagtaaggtcacccaggT------TCCCAGGAGGGCGGGAGCAGTTGGG--GGCAGCAAGGCCAGAGAGGAGGCTGCTGGGACG--AAAATGGAGCCTGAG------GTGGGGGTGGTGA--GGGAGACCAGCTGGCCCACTGGGTCCTGATCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAACGGGGTCCCCGCCCCAGCAGCACCGCCAAGTGCCCTGGGCCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCCCCCTATGCCCAGGCTGTGGCCCCATCGGCTACCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGTCCAGCCTggcggaggc------ggcggcggcggaggtggagggagcggcagcAATAGTAACAG--CAGTGCCGGTGGAGGGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGCGGGGT---GGGCATGGGCGGGGCTGGGCAGCCGCCGGCAGCCC-TTCCCATTTTATTCTT--TGTTCCCAGGTTACAGCTCAGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCCTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCACCAGCAGGGTTGGGATGGCGGCCTTTCGGCACAGAGAGGCGCTGGTGCCTCACCCCTGCATCAGTGGGTTCTGGG-CCCCCCGCCCTTGCTGCTGGGAATGTC---CGAGCACTG------TCCTCCACCTCTGTCGGGTGTTAACA-CCCCACTTCTTTCCAGCACGGAAAC----GACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAACATGTTCTCATCTAAGTGGAAGTTTTCTCAAGAGCCCCATACCCTTTCCTCCCCATTTCTGTTACCTGCCCAAGGC-TACCTGACTGCCACTGGAGGGTCACTGTTCCACTTTTCAAAGTGAATTGTCTCGAAGTCCTCATTCCTCTGCAGCCACTCCTCCAAATCTTAGCTCAGACCATTCCACTGTGTCCGCCTGTTTCCCGAAGACTGCCCCAAGAAAGAT---------CAGTGTGCACAAAGGGAAGGCCTGCTTCCCG-----G-CCCCTCA--CCAGCTCCAGCTGGCCTGCCCAAGAGG------GAATGGGCCC--TGTGTCCACCTGCCCAAG----------GCAGCTGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCAAGAATCCTCACT-CCCACCCCCGCAGCTCTGCTCTACTGATGAGAAACCATTCCAAAGATTGGGTTCTGCCTTTGTTTGCCCAGAG-----CCACTTTCTCCCATCTGTCTACCGTCAGCCGCCCCTCTCAGATCCCATCTGATGTGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCATCCCACCTTCAGGGG-CCC---TCCTCTCAACCCCTCTCTTCCATG----CTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACAGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTACTCAATGGGCCTCCACAGTTCAGCACCGCCCCGGAAATCAAGGTGGGCTCCTTGGACAT--CCCCCGAGCC-----------------------------------------------------------------------------------------T i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45402221 1991 + 49145316 GCTAATCACATATT----GAGGA--------------CACTTAGGTGTT--------------------TCTCGGTAGTCCCCTGGCTTCCGACAGATG-GATCTTCTCTGGCTGAC-------AACCTAAGCTGTGTGTCAGATCCCTGTGGGGGTGTCCGT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCCAG---GCAGGCTGGAAATT------AGTGTTTTAAGCGTGAAGGTG---ATGCAAGCCATGAGGGTGAGTAAAGTCACCCAGGT------TCCCAGGAGGGCGGCAGCAGCTG-G--GGCAGCAAGGCCAGAGAGGAGGCTGCTAGGACA--AAAGTGGAGCCTGAG------GTGGGGGTGGTGA--GGGAGACCAGCTGGCCCCCTGGGTCCTGACCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCACCCACCTATTCCTCTGGCCCCCCACCCACTGCCTCTGCCTTGAGTGCCACCCCTGGCAACAATGGGgcccctgccccagcagcacccccaagtgccctgggccccaaggccagtccagctcccagccacaactcgggcacccctgccccctatgcccaggctgtggccccaccagctcccagtgggcccagcaccacccagccccggccccCCAGCGTCCAGCCTAgtggaggcggtggaggtggcggcggaggcggagggagcagcagcaatagtaacag--cagtgccggtggaggGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAATCATCGGGGTGGGGAGCGCGGGCGGGGCTGGGCAGCAGCCGGCAGCCC-TTTCCA-TTGGCTCTT--TGTTCCCAGGTTACAGCTCAGTTGTAGCAGACAGCCCAGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAACAGCCAGGCCCTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTTGGCTGTTGACAGGGTTGGGGTGGCAGCCTTTTGGCACAGAGAGGCACTGGTGCCTCACCCCCACCTTGATGGGTTCTGGGCCCCCCCACCCTTGCTCCTGGGAACGTCCAGCAAGTGCTG------TCCTCCACCTCCATCAGGTGTT-GTGCCCCCACT---TTCCAGAAAGGACAC----TACATCAGCCTCTCTGCTTTGCCCTTCATAACGTTCTAAAATACATTCTCATCT-AGTGGAAGTTGTCTCAAGAGCCCCGCACCCTTTCTTCCCCATTTCTGTTACCCGCCCGAGCC-TACTTGACTGCCACAGGA-GGTCAGTGTTCCACTTTTCACATTGAATTGTCCCGAAGTCCTCATTCCTCTGCAGCTACTCCTCCAGATCTTAGCTCAGACGGTTCCACTGGATCT--CCGTTTCCCGAAGAATGCCCCAAGAAAGAGCTTAATTAACAATGTGCACAAAGGAAAGGC---CTTCCTG-----GCCCCCTCGCCCCAACTCCAGCTGGCCTGCCCAAG-GG------GCATGGGCCCTGTGTGTCCACCTGCCCAAG----------GCAGCCTG-------------------------TGTGGCCTGGT---------------------GGAGCCCCCAAGAATCCTCAC--CCCATCCCTGAAGTTCTGCTCTACTGATAAGAAACTGTTCTAAAAATTGGGCTCTGCCTTTGTTTGCCCAGAGAACCACTTCTTTCTCTCATCTGTCTGCCCTCAGCCACCCCTCTCAGATCCCTTCTGATTTGTGCGGGCTCCCCTCTCTCTAGCCAGACCTCTCTGCCCATCCCACCCTCAGGGGACCC---TCCTCTGAGCCCCTCTCCTCCATGCTCTCTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACAGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCGGGGGGACCCAGTCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCTGGTGCCCTGCTCAATGGGCCTCCGCAGTTCAGCACCACCCCGGAAATCAAGGTGGGCTCCTCAGATAT--CCCCTGAGCC-----------------------------------------------------------------------------------------T i calJac3.chr22 C 0 C 0 s mm10.chr7 3655198 1817 + 145441459 gctaatctcagactcatagagggctgcctgtctctgcctctcaagtgctaggatcaaaggcatgtgtcaccacTTTAGGTCTCAAGTTCAGGGTATTTGAGAGTTTCCCTTGGTCTCTTGTCTTAACCTAAACCCT--GTCAGATTCATGTGGG-----CTATAGGGACAATGTCCGGGGAGGACTTGGGACAGCTGG---GTGGGCTGGAAGTAAATAG----GTCTTAAACCTGAAGGTG---ATTGAA------------------GTCTCCTAGGT------GCCTCAGAGAATGTGGACAGTTAAT--AGC----AGGTCAGAGGCAAGGC----------------AGGAGGACAAG------AAGAGGGTGGTGGATAGGGGACAGGCTGGTCTAGTA---CCTGACCCTTTGTTTTTTCTTTCTTTCTTCCTGCAGTCTCCAGCCAAAAATGGCTCCAAGCCTGTCCACAGCAACCAGCACCCCCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCTGGCCCCCCACCTACCACTTCTGCCTTGAGCTCCACCCCTGGCAACAATGGGGCCTCTACCCCAGCAGCACCTACAAGTGCCCTGGGCCCTAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGTACTCCTGCACCCTATGCCCAGGCTGTGGCCCCACCTAATGCCAGCGGGCCCAGCAATGCCCAGCCACGGCCCCCCAGTGCCCAGCCAAGCGGGGGA------AGTGGTGGTGGCAGCGGAGGGAGCAGCAGCAATAGTAACAG--TGGCACAGGCGGAGGGGCTGGCAAGCAGAACGGTGCCACAAGTAAGTGGAG----ACCAGTTTGGGGAACA-GGGCAAGG-TGGACAGTAGCTGACAGCCTGTTTACA-CTTGTCCTT-CTTTCCCCAGGCTATAGTTCGGTTGTGGCAGACAGCCCTGCAGAGGTGACCCTGAGTAGCAGTGGGGGCAGCAGTGCCAGCAGCCAAGCCCTTGGGCCCACTTCGGGCCCTCACAACCCAGCTCCCAGCACCTCGTGAGT------------------AGTGGGGTGGCAGTGTGTGGGCAC----AAGCTCTTATGC----CACTTGTTTTA--GGGTTCCAAG---TTCTACCCTTCCTG--GGTAGTACC---TACCCAGTGTGTCCTTTCTTCACCTCAG-CAAGTGTTCTTTTCCCTGCTTCTTACCAAGTGGG------------------------------------------------ACATGTTTTACTCTCGG-------TTTCACAC--------TACACTGTCTT-CCCATTTCTGTTCTTTGCTCTGAGG-CAGCTGACTCCCATGAGTGTGGGGGCTTTTCCCTTTTCCAAGTAAAATATC-----------------------CTAGTCCTCCATTTCTT----------------------CAGCTTG-----------------------ACAT---------CAGATT--ACTAATGAAAGATCTGCTGCCTT-----G----------TCAGCCTCG--TTACCAGTCCTACTGG------GATTGCACCA--TGTG--CATCTGTGCAATCATTTACTCCAAAACTGTTTCAGTGACAATTCTAGAACTACCCTGTCCCCTGTCCTTTAACTTCATAAGCTGTTGGGGGGACCCTAAAATCCTGGTTGCACACCTCAGTACCTCTGCTGTACTGAAGAGGAG----TCCAGAGGTTGGATTC-ACTTCTGCATGCTC---------CAGCTGTCTT---GCTTTCAGCCCCCACCC-CCCTTTTTGGATCCCATAT----------------------------------TCTGTGCCTGT-----CTTCAAGGA-TCT---TAATTTGATT----CTCCTCCATTCT--TTACCCAGAAAGGAATCCAGTACGGCAGCCCCATCAGGGGCTGGGAATGTGGCTTCAGGCTCAGGGAATAACTCGGGGGGACCCAGCCTCTTGGTGCCACTGCCTGTAAATCCCCCCAGTTCTCCAACGCCCAGCTTCAGTGAAGCCAAGGCAGCTGGTACCCTGCTTAATGGTCCTCCACAGTTCAGCACCACCCCAGAAATCAAGGTGAGTTTCTCGGGTGTGAGCCCTGAGCC-----------------------------------------------------------------------------------------T i mm10.chr7 I 53 I 917 s canFam3.chr1 19615784 1640 - 122678785 ACTAATTACATACT----GAGGA--------------CATTTAGTTACC--------------------TCCC--------------TGCCCTCAGATG-GGT-GTCTGTGACCGAC-------ACCCT-GGTTGTGTGTCAAACCCCCACCGG-ATGT-TGT-GGGGAGGCGTCCATGTAGGACATGGGG-AGCTGGGGTGGGGGCTGGGATGCA-TGTGAGTGTCTTAGGTGTGAAGGTGGTTATTGAAGCCTTGAGGCTG----AGGTCAGCAGGGGGAGGAAGCTCAGGCAGCCAGGCCCAGTGAGGACGGCAGCCCAGCTTGGAGGAGGGGTGCCGGGGCGGCGGGGGGGAGGGCGGGCAGCATGTGCGGGAGGCTC--AGCAGACCTGCTGGTCAATTGGATCCTGATCCTCT--TCTCTC-------CCACCTGCAGTCTCCAGCCAAAAATGGCTCTAAGCCTGTCCACAGCAACCAGCATCCTCAGTCTCCGGCCGTGCCGCCCAGCTACCCACCTGGCCCCCCACCTGCCACCTCTGCCCTTAGCACCACTCCTGGCAACAATGGGGCCTCCACCCCAGCAGCGCCCACAAGTGCCCTGGgccccaaggccagcccagctcccagccacagttccggcacccctgccccctacgcccaggccgtggccccaccagcccccagcgggtccagcaccacccagccccggcctcccagtgtccagcccggtgggggagggggaagtggtggaggcggcagtggcggcagtggcagtagtaacag--cagtggaggtggaggtgctggCAAACAGAACGGCGCCACCAGTAAGTGGGAGGACTGCAG------GGGGTTGGGGGGGTCTGGG-ATTGGCTGGC--CTC-TTTTCA-TTCTCTCTTCCCACCCCCAGGTTATAGCTCAGTGGTGGCCGACAGCCCGGCAGAGGTGGCTCTCAGCAGCAGTGGGGGCAGTGGTGCCAGCAGCCAGGCTCTGGGCCCCCCATCAGGTCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCT-------------------------GGCCTTC------------------------------------------------A-GCCCCTGTCCTTGCC-------AGGAC------------------TTCTCCCACTGGGTTGGGTGTC-GTG-TCCAACTTCTTTCCAGCCAGAACATCGTATACGCCAGTCCCCTAGCTTTGCCCTTTTGACTGTTTTAAAACGT-TCCTTGGTTGATTGGGAGTGCTCACA-GAGTTCCATATG------TCCCCTTTCTGGTGACCTGCCTCAGGCTCACCTGACTCCCCTCAGAG-----------------------------------------------------AGCTGCCGCTCCATACCTCAGGTCAGACCTTTC------------------TCAGAAGATGGCCCCAAGAAAGGG---------AGGAGTG---------AAGAGCTGCTCCCTGGGTCTGCCTCCTTAC-CAGGCTCTGGGTGGGCTGCCCCAAGGGATGGACGCACTTGCCC--TGTGTCCATGCACCTAAG-----------------------------------------------------T---------------------GGAACA-----------------TCCACCTC----------------------------------------------------------------------CCACATGCTCC-----------------CCACCCC------------------ATGTGCCGTCGC--------------------CGCGGCCTGACTCGTCCCTGGAGC-ACCGAGCCCTCTC-------TCCTTCTCTG----CTGCCCAGGAAGGAACCCAGTGCAGCAGCCCCTGCAGGGGCTGGGGGTGTGGCCCCAGGCTCAGGGAACAATACAGGAGGACCCAGCCTCCTGGTGCCGCTTCCCGTGAACCCTCCCAGCTCCCCAACACCTAGCTTCAGTGAGGCCAAGGCAGCTGGCGCCCTGCTCAACGGACCTCCACAGTTCAGCACCGCCCCAGAGATCAAGGTGGGCCCC--AGCTG------------------------------------------------------------------------------------------------------- i canFam3.chr1 C 0 C 0 a score=907990.000000 s hg38.chr19_GL949747v2_alt 124634 319 + 729520 CTGTGTCCTGACT-------------------CTGTTGTTTCTTTCCTCCAGGTCTCTAGCTGCACCCC--------------CTGCCCCCACCCTCTTTCTGGA--TCTCTTTCTCTGGCTTTCTGTCCCCTTCTCAC-ACTTGCTCTTTCTCCAGGTCTTTCTGTACCACCCTCCCCGTGACCTTGATCTCTGGGGGCTCTCATACCTCCTCTCTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTGCACTTGTTGCTTGCTCTCTCTGGGTCTCCATCTTCATCCCCCCCGCAGGCCCTCAGTTTCTGTCC-------CCGTTTGTCCTCACAAGGCAT s panTro4.chr19 59058687 319 + 63644993 CTGTGTCCTGACT-------------------CTGTTGTTTCTTTCCTCCAGGTCTCTAGCTGCACCCC--------------CTGCCCCCACCCTCTTTCTGGA--TCTCTTTCTCTGGCTTTCTGTCCCCTTCTCAC-ACTTGCTCTTTCTCCAGGTCTTTCTGTACCACCCTCCCCGTGACCTTGATCTCTGGGGGCTCTCATACCTCCTCTCTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTGTACTTATTGCTTGCTCTCTCTGGGTCTCCATCTTCATCCCCCCGGCAGGCCCTCAGTTTCTGTCC-------CCGTTTGTCCTCACAAGGCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55935334 319 + 60714840 CTGTGTCCTGACT-------------------CTGCTGTTTCTTTCCTCCAGGTCTCTAGCTGCGCCCC--------------CTGCCCCCACCCTCTTTCTGGA--TCTCTTTCTCTGGCTTTTTGTCCCCTTCTGAC-ACTTGCTTTTTCTCCAGGTCTTTCTGTGCCACCCTCCCCGTGACCTTGATCTCTGGGGGCTCTCATACCTCCCCTCTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTGTACTTGTTGCTTGCTCTCTCTGGGTCTCCATCTTCATCCCCCCCGCAGGCCCTCAGTTTCTGTCC-------CCGTTTGTCCTCATAAGGCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102700510 319 - 106955855 CTGTGTCCTGACT-------------------CTGCTGTTTCTTTCCTCCAGGTCTCTAGCTGTGCCCC--------------CTGCCCCCACCCTCTTTCTGGA--TCTCTTTCTCTGGCTTTCTGTCCCCTTCTCAC-ACTTGCTGTTTCTCCAGGTCTTTCTGTACCACCCTCCCCGTGACCTTGATCTCTGGGGGCTCTCATGCCTCCCCTCTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTGTACTTGTTGCTTGCTCTCTCTGGGTCTCCATCTTCATCTCCCCCGCAGGCCCTCAGTTTCTGTCC-------CCGTTTGTCCTCACAAGACAT i nomLeu3.chr10 C 0 I 118 s rheMac3.chr19 59988545 320 + 64156825 CTGTGTCCTGACT-------------------CTGCTGCTCCTTTCCTCCAGGTCTCTAGCTGCGCCCC--------------TTGCCCCAACCCCCTTTCTGGATCTCTCTCTCTCTAGCTTTCTGTCCCCTTCTCAC-ACTTGCTCGTTCTCCAGGTCTTTCTGTACCACCCTTCCCGTGACCTTGATCTCTGGGGGCTCTCATACCTCCCCTCTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTATACTTGTTGCTTGCTCTCTCTGGGTCTCCATCTTCATCCCCACC-CAGGCCCTCAGTTTCTGTCC-------CCATTTGTCCTCACAAGGCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55013260 319 + 59248254 CTGTGTCCTGACT-------------------CTGCTGCTCCTTTCCTCCAGGTCTCTAGCTGCGCCCC--------------TTGCCCCAACCCCCTTTCTGGATCTCTCTCTCTCTAGCTTTCTGTCCCCTTCTCAC-ACTTGCTCGTTCTCCAGGTCTTTCTGTACCACCCTTCCCGTGACCTTGATCTCT-GGGGCTCTCATACCTCCCCACTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTATACTTGTTGCTTGCTCTCTCTGGGTCTCCATCTTCATCCCCACC-CAGGCCCTCAGTTTCTGTCC-------CCATTTGTCCTCACAAGGCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47119528 320 + 51301725 CTGTGTCCTGACT-------------------CTGCTGTTCCTTTCCTCCAGGTCTCTAGCTGCgcccc--------------ttgcccccaccccctttctggatctctctctctctagctttCTGTCCCCTTCTCAC-ACTTGCTCGTTCTCCAGGTCTTTCTGTACCACCCTTCCCGTGACCTTGATCTCTGGGGGCTCTCATACCTCCCCTCTTGTTCCCTCTAAAGCTCTGTTTCTCTgggtctcttttcctttctcttggttATACTTGTTGCTTGCTCTCTCTGGGTCTCCATCTTCATCCCCACC-CAGGCCCTCAGTTTCTGTCC-------CCATTTGTCCTCACAAGGCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46826728 320 + 50890351 CTGTGTCCTAACT-------------------CTGCTGTTCCTTTCCTCCAGGTCTCTAGCTGCGCCCC--------------TTGCCCCCACCCCCTTTCTGGATCTCTCTCTCTCTAGCTTTCTGTCCCCTTCTCAC-ACTTGCTCGTTCTCCAGGTCTTTCTGTACCACCCTTCCCGTGACCTTGATCTCTGGGGGTTCTTATACCTCCCCTCTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTATACTTGTTGCTTGCTCTCTCTGCATCACCATCTTCATCCCCACC-CAGGCCCTCAGTTTCTGTCC-------CCATTTGTCCTCACAAGGCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45404212 296 + 49145316 CTGTATCCTGACTGCTCTCTGCACTCCAGACATTTCTCACCCTTTCCTCCAGGTCTCTAGCTGTGCACC--------------CTCCCCGC-----CTTTCTGGA--TCTTGCTCTCTGGCTTTCTGTCCCCTTCTCAC-ACTTGCTCTTTCTCCGGGTCTTTCTGCACCACGCTCTCC-TGACCATGATCTCTGGGAGCTCTCATA-CTCCCCTCTTG-TCCCTCTGAAG--CTGTTTCTCTGGG--TCTGTTCCTCTCTCTTGGTT----------------------------TCATCCTCATCTCCCC--CAGGCCCTCAGTTTCTGTCC-------CCATTTGTCTTTACAAAGGAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19617424 303 - 122678785 CTGTGTCCTTGTC-------------------CTGCCG------TCCTCCTGTACATTTGCTGTCCCCCAACCTGCAGGTCTGCCACCCTCAACTCCTCTGGGGG--------GCTCTGG-----TGTGCTCTCCACACTGCCTGCGCTCTCTCCTGGTCTCTGAGCTCC------TCCACCATCCTGCCCTCTGGGA---CACTTTCCTGTGCTCCTGTTGGGACCTGCCCTCTTGCACTCTGGG-----TTCCCATCATCTCTGTCCCCATTTCTGCTTACTCCTTCAGACAC-CCATCATCCAGCTCACC----ACCATCCTTTTCCCTTCCGAGGGACCGCCTAAATTGAGAAAAC-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I a score=2548.000000 s hg38.chr19_GL949747v2_alt 124953 1 + 729520 A s panTro4.chr19 59059006 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55935653 1 + 60714840 A i ponAbe2.chr19 C 0 I 116 s rheMac3.chr19 59988865 1 + 64156825 A i rheMac3.chr19 C 0 I 116 s macFas5.chr19 55013579 1 + 59248254 A i macFas5.chr19 C 0 I 117 s papAnu2.chr19 47119848 1 + 51301725 A i papAnu2.chr19 C 0 I 117 s chlSab2.chr6 46827048 1 + 50890351 A i chlSab2.chr6 C 0 I 116 s calJac3.chr22 45404508 1 + 49145316 A i calJac3.chr22 C 0 I 114 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617727 0 - 122678785 C e nomLeu3.chr10 102700829 118 - 106955855 I a score=2255.000000 s hg38.chr19_GL949747v2_alt 124954 34 + 729520 GACTGGTGTACTTTCTGCACAAGTAGAAAGACTG--- s panTro4.chr19 59059007 34 + 63644993 GACTGGTGTACTTTCTGCACAAGTAGAAAGACTG--- i panTro4.chr19 C 0 C 0 s canFam3.chr1 19617727 29 - 122678785 -ACTGATGCCCACTCTG-------GGATGCATTTCAT i canFam3.chr1 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e ponAbe2.chr19 55935654 116 + 60714840 I e calJac3.chr22 45404509 114 + 49145316 I e nomLeu3.chr10 102700829 118 - 106955855 I e chlSab2.chr6 46827049 116 + 50890351 I e papAnu2.chr19 47119849 117 + 51301725 I e macFas5.chr19 55013580 117 + 59248254 I e rheMac3.chr19 59988866 116 + 64156825 I a score=2100.000000 s hg38.chr19_GL949747v2_alt 124988 1 + 729520 G s panTro4.chr19 59059041 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55935770 1 + 60714840 G i ponAbe2.chr19 I 116 C 0 s rheMac3.chr19 59988982 1 + 64156825 g i rheMac3.chr19 I 116 C 0 s chlSab2.chr6 46827165 1 + 50890351 G i chlSab2.chr6 I 116 C 0 s calJac3.chr22 45404623 1 + 49145316 G i calJac3.chr22 I 114 C 0 s canFam3.chr1 19617756 1 - 122678785 G i canFam3.chr1 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e nomLeu3.chr10 102700829 118 - 106955855 I e papAnu2.chr19 47119849 117 + 51301725 I e macFas5.chr19 55013580 117 + 59248254 I a score=475045.000000 s hg38.chr19_GL949747v2_alt 124989 151 + 729520 TTGGGTGAATGCAGCCTGGTTCCACCCTTT----AGGAAGCTTC-----CCTGCTGGGGCagctgcagggaag--gttgcggtgggcccaccgaggggcatctgacctgacctgggagacaggcccaggaagg--tctgagagggggtgatgtttaagctgaga s panTro4.chr19 59059042 152 + 63644993 TTGGGTGAATGCAGCCTGGTTCCACCCTTT----AGGAAGCTTC-----CCTGCTGGGGCagctgcagggaag--gttgcggtgggcccaccgaggggcatctgacctgacctgggagacaggcccaggaagg-ctctgagagggggtgatgtttaagctgaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55935771 152 + 60714840 TTGGGTGAATGCAGCCTGGTTCCTCCCTTT----AGGAAGCTTC-----CCTGCTGGGGCagctgcagggaag--gttgctgtgggcccaccgaggggcatctgacctgacctgggagacaggcccaggaagg-ctctgagagggggtgatgtttaagctgaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102700947 152 - 106955855 TTGGGTGAATGCAGCCTGGTTCCTCCCTGT----AGGAAGCTTC-----CCTGCTGGGGCagctgcagggaag--gttgctgtgggcccaccgaggggcatctgacctgacctgggagacaggcccaggaagg-ctctgagagggggtgatgtttaagctgaga i nomLeu3.chr10 I 118 C 0 s rheMac3.chr19 59988983 152 + 64156825 ttgggtgAATGCAGCCTGGTTCCTCCCTTT----AGGAAGCTTC-----CCTGCTGGGGCagctgcagggaag--gttgctgtgggcccactgaggggcatctgagctgacctgggagacaggcccaggaggg-ctctgagaggtggtgatgtttaagctgaga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55013697 152 + 59248254 TTGGGTGAATGCAGCCTGGTTCCTCCCTTT----AGGAAGCTTC-----CCTGCTGGGGCagctgcagggaag--gttgctgtgggcccactgaggggcatctgagctgacctgggagacaggcccaggaggg-ctctgagaggtggtgatgtttaagctgaga i macFas5.chr19 I 117 C 0 s papAnu2.chr19 47119966 152 + 51301725 TTGGGTGAATGCAGCCTGGTTCCTCCCTTT----AGGAAGCTTC-----CCTGCTGGGGCAGCTGCCGGGAAG--GTTGCTGTGGGCCCACTGAGGGGCATCTGAGCTGACCTGGGAGACAGGCCCAGGAAGG-CTCTGAGAGGTGGTGATGTTTAAGCTGAGA i papAnu2.chr19 I 117 C 0 s chlSab2.chr6 46827166 146 + 50890351 TTGGGTGAATGCAGCCTGGTTCCTCCCTTT----AGGAAGCTTC-----CCTGCTGGGGCACTTgcagggaag--gttgctgtgggcccgctgaggggcatctgagctgacctgggagacaggcccaggaagg-ctctgagagg------tgtttaagctgaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45404624 147 + 49145316 TTGGGT-AATGCAGCCTGCTTCCTCCCTTT----AGGAAGCTTC-----CCTGCTGGGGTGTCAgcaggagag--gttgctatgggtcccctgaaggatatgtgacctaacctgggagacagg-ccaggaagg-ctctgtgaggggg---tgtttcagctgaaa i calJac3.chr22 C 0 C 0 s canFam3.chr1 19617757 156 - 122678785 CTGGGTGAATACACCCAGGTCCCGCCTTCTGTACGGGAAGCTGCGTGTGACTGCACGGG-----GCAGGGCAGCACGTGCTGTGGAGCCATAGAAATGTCTTATACTGAACCTGGGGAGGTGGCCCAGCAAGGTCTCTAAGGAGAGA---CCTCTGAGCCGGGA i canFam3.chr1 C 0 I 429 e mm10.chr7 3657015 917 + 145441459 I a score=708773.000000 s hg38.chr19_GL949747v2_alt 125140 330 + 729520 cctggaccaggcaggggggctaacagctgca------------ggaagggcttcaggaggtgctttaggaggagcatgcatctgcctgtgtgcttaggaagctgggcaggatgcagcAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGACAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGATAGGACGGTGGGGTCCTGATCATCGAGGGTCAGGAGCTGGGGCTTGGCTTGTGAGCCA-------GTATACTGTAGCGCAGCTTCCATGGGGGGACCAGTGTGTATGCCCAGGCTGTCCAGGAGGCAGTGTGCGCGCCCAGGCTGTCCAGGAGGCAG s panTro4.chr19 59059194 330 + 63644993 cctggaccaggcaggggggctaacagctgca------------ggaagggcttcaggaggtgctttaggaggagcatgcatctgcctgtgtgcttaggaagctgggcaggatgcagcAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGACAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGATAGGACGGTGGGGTCCTGATCATCGAGGGTCAGGAGCTGGGGCTTGGCTTGTGAGCCA-------GTATACTGTAGCGCAGCTTCCATGGGGGGACCAGTGTGTATGCCCAGGCTGTCCAGGAGGCAGTGTGCGCGCCCAGGCTGTCCAGGAGGCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55935923 306 + 60714840 cctggaccaggcagaggggctaacagctgca------------ggaagggcttcaggaggtgctttaggaggagcatgcatctgcctgggtgcttcggaagctgggcaggatgcagcAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGGCAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGACAGGACGGTGGCGTCCTGATCATCAAGGGTCAGGAGCTGGGGCTTGGCTCGTGAGCCAGTATACTGTATACTGTAGCGCAGCTTCCACGGGG-------------------------------GGCAGTGTGTATGCCCAGGCTGTCCAGGAGGCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102701099 316 - 106955855 cctggaccaggcaggggggctaacagctgca------------ggaggggcttc------------aggaggagcctgcatctgcctgggtgcttaggaagctgggcaggatgcagcAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGGCAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGACAGGACGGTGGGGTCCTCATCATCGAGGGTCAGGAGCTGGGGCTTGGCTTGTGAGCTA-------GTGTACTGTAGCGTAGCTTCCACGGGGGG--CAGTGTGTATGCCCAGGCTGTCCAGGAGGCACTGTGTGCGCCCAGGCTGTCCAGGAGGCAG i nomLeu3.chr10 C 0 I 319 s rheMac3.chr19 59989135 260 + 64156825 cctggaccaggcaggggggctaacagctgca------------ggaagggcttcaggaggtgctttaggaggagcatgcatct----------ttaggaggctgggcaggaTGCAGCAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGGCAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGACAGGACGG-GGGGTCCTGATCATCCAGGCTCAGGAGCTGGGGCTTGGCTTGTGAGCCA-------GTATCCTGTAGTGCAGCTTCCACGGGG-----------------------------------------------------------AGGCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55013849 260 + 59248254 cctggaccaggcaggggggctaacagctgca------------ggaagggcttcaggaggtgctttaggaggagcatgcatct----------ttaggaggctgggcaggaTGCAGCAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGGCAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGACAGGACGG-GGGGTCCTGATCATCCAGGCTCAGGAGCTGGGGCTTGGCTTGTGAGCCA-------GTATCCTGTAGCGCAGCTTCCACGGGG-----------------------------------------------------------AGGCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47120118 253 + 51301725 CCTGG-------AGGGGGGCTAACAGCTGCA------------GGAAGGGCTTCAGGAGGTGCTTTAGGAGGAGCGTGCATCT----------TTAGGAGGCTGGGCAGGATgcagcagagaggagagaggtgTCCACTCTGCAGCAGGCAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGACAGGACGG-GGGGTCCTGATCATCCAGGCTCAGGAGCTGGGGCTTGGCCTGTGAGCCA-------GTATCCTGTAGCGCAGCTTCCACGGGG-----------------------------------------------------------AGGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46827312 271 + 50890351 cctggaCCAGGCA-GGGGGCTCACAGCTGCAGGAAGGGCTGCCGGAAGGGCTTCAGGAGGTGCTTTAGGAGGAGCATGCATCT----------TTAGGAGGCTGGGCAGGATGCAGCAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGGCAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGACAGGACGG-GGGTTCCTGATCATCCAGGCTCAGGAGCTGGGGTTTGGCTCGTGAGCCA-------GTATCCTGTAGCGCAGCTTCCACGGGG-----------------------------------------------------------AAGCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45404771 262 + 49145316 cctggagCAGCCA-GGGGTCTAACAGCTGCA------------GGAGGGGCTTC------------AGGAGGAGTCCGCATCTGCCTGAGTGCTCAGGAGGCTGGGCAGGATGCAGCAGAGAGGAGC-AGGTATCCACTCTGCAGGAGGCAGTGCTGCCGGCTGGAGGGCTGA--------GTGTGGCAGGACAGGAGTGGGGGTTCCTGATCATGGAGGGTCAGGAGCTGGCACTTGGCTCGTGAGCCA-------GGAT-CTGCAGCGTAGCTTCCACAGGG------------------------------AGGTAGTGTGCCCC---------------AGCCTG i calJac3.chr22 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I a score=501838.000000 s hg38.chr19_GL949747v2_alt 125470 188 + 729520 TGTGCGCGCCCAGGCTGTCCAGGTCCAAGTCTTGGCAttgtcctttctgtg-----ccttcatctgggaaacggcaatagtcacgattatacctactatgtagggttatttggaagactaaatcatcctcataaagctcttggaacagtttctggcccaacagaagcattaattttttt-------------tttttttctttttt s panTro4.chr19 59059524 188 + 63644993 TGTGCGCGCCCAGGCTGTCCAGGTCCAAGTCTTGGCAttgtcctttctgtg-----ccttcatctgggaaacggcagtagtcacgattatacctactatgtagggttatttggaagactaagtcatcctcataaagctcttggaacagtttctggcccaacagaagcattaattttttt-------------tttttttctttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55936229 189 + 60714840 TGTGTGTGCCCAGGCTGTCCAGGTCCAAGTCTTGGCAttgtcctttctgtgcctt-ccttcatctgggaaacggcaatagtcacgattatacctactatgtagggttatttggaagactaaatcatcctcgtaaagctcttggaacagtttctggcccaacagaagcattaa---tttt-------------tttttttctttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102701734 191 - 106955855 TGTGTGCGCCCAGGCTGTCCAGGTCCAAGTCTTGGCAttgtccttgctgtgcatt-ccttcatctgggaaacggcaatagtcacgattatacccaccgtgtagggttatttggaagactaaatcatcctcataaagctgttggaacagtttctggcccaagagaagcattaa-tttttt-------------tttttttctttttt i nomLeu3.chr10 I 319 C 0 s rheMac3.chr19 59989395 190 + 64156825 CGTGTGCGCCCAGGCTGTCCGGGTCCAAGTCTTGGCAttgtcctttctgtgccttcccttcatatgggaaatggcaataatcacaattatacctaccatataggtttatttggaagactaaatcattcttacgaagctattggaacagtttctgacccaacagaagcattAA---tttt-------------tttttttctttttt i rheMac3.chr19 C 0 I 347 s macFas5.chr19 55014109 190 + 59248254 CGTGTGCGCCCAGGCTGTCCGGGTCCAAGTCTTGGCAttgtcctttctgtgccttcccttcatatgggaaatggcaataatcacaattatacctaccatataggtttatttggaagactaaatcattcttacgaagctattggaacagtttctgacccaacagaagcattaa---tttt-------------tttttttctttttt i macFas5.chr19 C 0 I 10 s papAnu2.chr19 47120371 190 + 51301725 CATGTGCGCCCAGGCTGTCCGGGTCCAAGTCTTGGCATTGTCTTTTCTGTACCTTCCCTTCATCTGGGAAATGGCAATAATCACGATTATACCTACCATATAGGTTTGTTTGGAAGACTAAATCATTCTTACGAAGCTATTGGAACAGTTTCTGACCCAACagaagcattaa---tttt-------------tttttttttttttt i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46827583 203 + 50890351 CGTGTGCGCCCAGGCTGTCCGGGTCCAAGTCTTGGCAttgtcctttctgtgccttcccttcatctgggaaatggcagtaatcacgattatacctaccatataggtttatttggaagactaaatcattcttatgaagctattggaacagtttctgacccaacagaagcattaa---ttttatttttatttttatttttttttttttt i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45405033 172 + 49145316 ------------------CCAGGTCCAAGTTTTGGCAttgtcttttctgtgcttg-ccttcatctgggaaatggcagtgat-atgatgataactaccatacagggttatttggaagagcaacttactatggcagagctcttggaacagtttctggcccaacagaggcattcg-attttt-------------tttttttttttttt i calJac3.chr22 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I a score=439776.000000 s hg38.chr19_GL949747v2_alt 125658 210 + 729520 gagacagagtcttgctctgtcacccaggctggagtgcagtggtgcaatctcagctgaatgcaacatccgcctcctgggttcaagcgattctcctgccgcagcctactgagtagctgggattacaggcgcctgccaccacgccaggctaatttttatatttttaatagagatggggttttgccatgttggtcaggcaggtcttgaactccg s panTro4.chr19 59059712 210 + 63644993 gagacagagtcttgctctgtcacccaggctggagtgcagtggtgcgatctcagctgaatgcaacatccgcctcctgggttcaagcgattctcctgccgcagcctactgagtagctgggattacaggcacctgccaccacgccaggctaatttttgtatttttaatagagatggggttttgccatgttggtcaggcgagtcttgaactcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55936418 209 + 60714840 gagacagagtcttgctctgtcacccaggctggagtgcagtagtgcgatct-ggctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctactgagtggctggtattacaggcgcctgccaccacgccaggctaatttttatatttttaatagagatggggttttgccatgttggtcaggcgggtctcaaacccct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102701925 209 - 106955855 gagacagagtcttgctctgtcacccaggctggtgtgtagtagtgcgatct-ggctcgctgcaacctccacctcccgggttcaagcgattctcctgcctcaccctactgagtagctgggatcacaggcgcctgccaccacgccaggctaatttttgtgattttcatagagatggggttttgccatgttggtcaggcgggtctcgaactcct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55014309 209 + 59248254 gagatggagtcttgctctgtcaccgaggctggagtgcagtggtgccatct-ggctcactgcaagctctgcctcccaggttcaagtgattctcctgcctcagcctactgagtagctgggactacagatgcctgccaccacgcccagctaatttttgtatttttagtagagatggggtttcaccatgttggtcaggcgggtctcgaactcct i macFas5.chr19 I 10 C 0 s papAnu2.chr19 47120562 209 + 51301725 gagatggagtcttgctctgtcactgaggctggagtgcagtggtgccatct-ggctcactgcaagctccacctcccaggttcaagtgattctcctgcctcagcctactgagtagctgggactacagatgcctgccaccacgcccagctagtttttgtatttttagtagagatggggtttcaccatgttggtcaggtgggtctggaactcct i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46827787 209 + 50890351 gagatggagtcttgctctgtcaccaaggctggagtgcagtggtgccatct-ggctcaccgcaagctccgcctcccaggttcaagtgattctcctgcctcagcctactgagtagctgggactacagatgcctgccaccacgcccagctaatttttgtatttttagtagagatggggtttcaccatgttggtcaggcgggtctcgaactcct i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45405205 203 + 49145316 ----gagagtcttg--ctgttacccaggctggagtgcagtcgttcagtctcagttcactgcagtctccacctcccgggttcaagtgagtctcctgcctcagcctcccaagtagctgggattacaggtgccaaccacc-cacctggttgatttttgtatttttagaagagatggggtttcaccatgtgggtcaggcagggcttgaactcct i calJac3.chr22 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I e rheMac3.chr19 59989585 347 + 64156825 I a score=1174031.000000 s hg38.chr19_GL949747v2_alt 125868 399 + 729520 aacctcaggtgatccacccacctcgacctcccaaagtgctgggattacaggtgtgagccaccgtgcccggccCAAATTTTAGAAGTA-GGTGGACAGGATATTTATAGTGCGTGCATTTTTCTGGAAAAA-GGGAAACAGCAGCTTTGAGATTTTCAGAA-GGGGTCCATATCTTTTAACACCACCAACAACAAAAATGAATCGCTGGGGTGGGTGGTCGGGAACCATGGCAAGGTTTGGAGTAGAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCTGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGCAGGAGAGGACAGGCCTGGGCTGTGTGGGACATGGTGGCACGACAGGGAAGGGAGCCATCCAGTGGGGTTTAGAAGCAGGAC s panTro4.chr19 59059922 399 + 63644993 aacctcaggtgatccacccacctcgacctcccaaagtgctgggattacaggtgtgagccaccgtgcccggccCAAATTTTAGAAGTA-GGTGGACAGGATATTTATAGTGCGTGCATTTTTCTGGAAAAA-GGGAAACAGCAGCTTTGAGATTTTCAGAA-GGGGTCCATATCTTTTAACACCACCACCAACAAAAATGAATCACTGGGGTGGGTGGTCGGGAACCATGGCAAGGTTTGGAGTAGAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCTGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGCAGGAGAGGACAGGCTTGGGCTGTGTGGGACATGGTGGCACGACAGGGAAGGGAGCCATCCAGTGGGGTTTAGAAGCAGGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55936627 399 + 60714840 aacctcaggtgatccacccgcctcgacctcccaaagtgctgggattacaggtgtgagccaccgtgcccggccCAAATTTTAGAAGTA-GGTGGATGGGATATTTATAGTGCGTGCATCTTTCTGGAAAAA-GGGAAACAGCAGCTTTGAGATTTTCAAAA-GGGGTCCATATCTGTTAACACCACCACCAACAAAAATGAATCGCTGGGGTGGGTGGTCGGGAGCCATGGCAAGGTTTGGAGTAGAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCCGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGCAGGAGAGGACAGGCCTGGGCTGTGTGGGGCATGGTGGCGTGACAGGGAAGGGAGCCATCCAGTGGGGGTTACAAGCAGGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102702134 400 - 106955855 aacctcaggtgatccacccgcctcgacctcccaaagtgctgggattacaggtgtgagccaccgtgcccggccCAAATTTTAGAAGTA-GGTGGACAGGATATTTATAATGTGTGCATTTTTCTGGAAAAA-GGGAAACAGCAGCTTTGAGGTTTTCAAAATGGGTTCCATATCTTTTAACACCACCACCAACAAAAATGAATTGCTGGGGTGGGTGGTCGGGAACCATGGCAAGGTTTGGAGTAGAGAAGGAACAACGTGACTTAATTGGAAAGGTCCCCCGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGCAGGAGAGGACGGGCCTGGGCTGTGTGGGGCATGGTGGCATGACAGGGAAGGGAGCCATCCAAGGGGGGTTAGAAGCACGAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59989932 401 + 64156825 aacctcaggtgatctgcccgccttggcctcccgaagtgctgggattacaggtgtgagccaccgtgcctggccCAAATTTTAGAAGTATGGTGGACAAGATATTTATAGTGCATGCATTTTTCTGGAAAAAGGGGAAACAGCAGCTTTGAGATTTTCAAAA-GGGGTCCATACCTTTTAACATCACCACCAACAAAAAGGAATTGCTGGGGTGGGTGGTCGGGAACCGTGGCAAGGTTTGGAGTAGAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCCGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGTAGGAGAGGACAGGCTTGGGCTGCGTGGGGCATGGTGGCGTGACAGGGAAAGGAGCCATCCAAGGTGGGTTAGAAGCAGGAC i rheMac3.chr19 I 347 C 0 s macFas5.chr19 55014518 401 + 59248254 aacctcaggtgatctgcccgccttggcctcccgaagtgctgggattacaggtgtgagccaccgtgcctggccCAAATTTTAGAAGTATGGTGGACAAGATATTTATAGTGCATGCATTTTTCTGGAAAAAGGGGAAACAGCAGCTTTGAGATTTTCAAAA-GGGGTCCATACCTTTTAACATCACCACCAACAAAAAGGAATTGCTGGGGTGGGTGGTCGGGAACCGTGGCAAGGTTTGGAGTAGAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCCGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGTAGGAGAGGACAGGCTTGGGCTGCGTGGGGCATGGTGGCGTGACAGGGAAAGGAGCCATCCAAGGTGGGTTAGAAGCAGGAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47120771 401 + 51301725 aacctcaggtgatctgcccgcctcggcctcccaaagtgctgggattacaggtgtgagccaccgtgcctggcccaaattttAGAAGTATGGTGGACAAGATATTTATAGTGCAtgcatttttctggaaaaagggGAAACAGCAGCTTTGAGATTTTCAAAA-GGGGTCCATACCTTTTAACATCACCACCAACAAAAAGGAATTGCTGGGGTGGGTGGTCGGGAACCGTGGCAAGGTTTGGAGTAGAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCTGGGGCTGGTGAGGACAGGATAGAGAGAGGGTGGTCTGGGTAGGAGAGGACAGGCTTGGGCTGcgtggggcgtggtggcgtgaCAGGGAAAGGAGCCATCCAAGGTGGCTTAGAAGCAGGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46827996 396 + 50890351 aacctcaggtgatctgcccgcctcagcctcccgaagtgctgggattacaggtgtgagccaccgtgcctggccCAAATTTTAGAAGTATGGTGGACAAGATATTTATAGTGCATGCATTTTTCTGGAAAAAGGGGAAACAGCAGCTTTGAGATTTTCAAAA-GGGGTCCATACCTTTTAACATCACCACCAACAAAAAGGAATTGCTGGGGTGGGTGGTCGGGAACCGTGGCAGGGTTTG-----GAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCCGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGTAGGAGAGGACAGGCTTGGGCTGCGTGGGGCATGGTGGCGTGCCAGGGAAAGGAGCCATCCAAGGTGGGTTAGAAGCAGGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45405408 370 + 49145316 gacctcaggtgatccacccacctcagcctcccaaagtactgggattacaggcttgagccaccgcacccagccCAAA-TTTAGAAGTACTGTGGACAGGAAA--CATACTGTGTGCATTTTTGTGGAGAAA-GGGAAACA--AGCTTTGAGATTTTCAAGA-GGGGTTCATACCTTTTGACACCACCACCAGCAAAAATGAATCACTGGGGTGGGCGGTCAGGAACTATGGCAAGGTTTGAAGTAGAGAAGGAACAACCTGACGTCATTAGAAAGGTCCCCTGGGGC---TGAGGACAGGATAGAGGGTGGGTGGTCTGGGCAGGAGAGGACAGGCCCGGGCTGTGTGGGGCATGGTGGCATGACAGG----------------------TTAGAAGCAGGAC i calJac3.chr22 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I a score=285119.000000 s hg38.chr19_GL949747v2_alt 126267 117 + 729520 GGATAgctgggcgtggtggctcacacctgtaatcccagctcttagggaggcagaggcgggaggatagcttgagcccaggagtttgagacctgcctgggcgatatagcgagacAGAAT s panTro4.chr19 59060321 117 + 63644993 GGATAgctgggcgtggtggctcacacctgtaatcccagctcttagggaggcagaggcgggaggatagcttgagcccaggagtttgagacctgcctgggcgatatagcgagacAGGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55937026 117 + 60714840 GGATAgccgggcacggcggctcacatctgtaatcccagctcttagggaggcacaggcgggaggatagcttgagcccaggagtttgagacctgcttgggcgatatagcgagacAGGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102702534 117 - 106955855 AGATAgccgggtgcggtggctcacgcctgtaatcccaactcttagggaggcagaggcgggagggtagcttgagcccaagagtttgagacctgcttgggcgatatagcaagacAGGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59990333 117 + 64156825 GGATAgccgggcgcggtggctcacacctgtgatcctagctcttagggaggcagaggcaggaggataacttgagcccaggagtttgagacctgcctgggcgatacagcaaaacAGGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55014919 117 + 59248254 GGATAgccgggcgcggtggctcacacctgtgatcctagctcttagggaggcagaggcaggaggataacttgagcccaggagtttgagacctgcctgggcgatacagcaaaacAGGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47121172 117 + 51301725 ggatagccgggcgcggtggctcacacctgcgatcccagctcttagggaggcagaggcaggaggataacttgagcccaggagtttgagacctgcctgggcgaTACAGCAAAACAGGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46828392 117 + 50890351 GGATAgccgggcgcggtggctcacacctgtgatcccagctcttagggaggcagaggcaggaggataacttgagcccaggagtttgagacctgcccgggcgatacagcaaaacAGGAT i chlSab2.chr6 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I e calJac3.chr22 45405778 0 + 49145316 C a score=593260.000000 s hg38.chr19_GL949747v2_alt 126384 227 + 729520 GGATAAGCCTTGGCGACTGACTCGTTGTGGAGAGTCCAGCACAGGGCTGGGGTTTGGGACAGCTGCACGTGGCTGGAGGAGATGGGAGGAACCAGCCCTGACTTTGGGGAACAGAAGCCTGCTGTAACCTTTGTAATAGGAAACGAGGCTGTGGCTGCGGGGCTGGAGACCCAACCTACCTGTTTCCAGCAAGGAGACTGAAGCCTAGCCGGGCTGGGCCCACCCCG s panTro4.chr19 59060438 227 + 63644993 GGATAAGCCTTGGCGACTGACTCGTTGTGGAGAGTCCAGCACAGGGCTGGGGTTAGGGACAGCTGCACGTGGCTGGAGGAGATGGGAGGAACCAGCCGTGACTTTGGGGAACAGAAGCCTGCTGTAACCTTTGTAATAGGTAACGAGGCTGTGGCTGCAGGGCTGGAGACCCAACCTACCTGTTGCCAGCAAGGAGACTGAAGCCTAGCCGAGCTGGGCCCACTCCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55937143 227 + 60714840 GGATAAGCCTTGGCGACTGACTTGTTGTGGAGAGTCCAGCACAGAGTTGGGGTTAGGGACAGCTGCACGTGGCTGGAGGAGATGGGAGGAACCAGCCCTGACTTTGGGGAACAGAAGCCTGCTGTAACCTTTGTAATAGGAAACGACGCTGTGGCTGCAGGGCTGGAGACCCCACCTACCTGTTGTCAGCAAGGAGACTGAAGCCTAGCCGGACTGGGCCCACCCCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102702651 177 - 106955855 GGATAAGCCTTGGTGACTGACTCGTTGTGGAGAGTCCAGCACAGGGCTGGGGTTAGGGACAGCTGCACGTGGCTGGAGGAGATGGGAGGAACCAGCCCTGACTTTGGGAAACAGATGCCTGCCGTAACCTTTGTAATAGGAAACGAGGCTGT--------------------------------------------------GCCTAGCCGGGCTGGGCCCACCCCG i nomLeu3.chr10 C 0 M 981 s rheMac3.chr19 59990450 224 + 64156825 GGATAAGCCTTGGCAACTGATGCATTGTG--GAGTCCCGCACAGGGCTGGGGTTAGGGACAGCTGCACGTGGCCGGAGGAGAT-GGAGGAACCAGCCCTGACTTTGGGGAACAGAAGCCTGCTGTAACCTTTGTAATAGGAAACGAGGCTGTGGCTACAGGTCTGGAGACCCAGCCTACCTGTCGCCAGCAAGGAGACTGAAGTCTAGCAGGGCTGGGCTCACCCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55015036 224 + 59248254 GGATAAGCCTTGGCAACTGATGCTTTGTG--GAGTCCCGCACAGGGCTGGGGTTAGGGACAGCTGCACGTGGCCGGAGGAGAT-GGAGGAACCAGCCCTGACTTTGGGGAACAGAAGCCTGCTGTAACCTTTGTAATAGGAAACGAGGCTGTGGCTACACGTCTGGAGACCCAGCCTACCTGTCGCCAGCAAGGAGACTGAAGTCTAGCAGGGCTGGGCTCACCCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47121289 224 + 51301725 GGATAAGCCTTGGCGACTGACGCATTGTG--GAGTCCCGCACAGGGCTGGGGTTAGGGACAGGTGCACGTGGCCAGAGGAGAT-GGAGGAACCAGCCCTGACTTTGGGGAACACAAGCCTGCTGTAACCTTTGTAATAGGAAACAAGGCTGTGGCTACAGGTCTGGAGACCCAGCCTACCTGTCGCCAGCAAGGAGACTGAAGCCTAGCAGGGCTGGGCTCACCCGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46828509 224 + 50890351 GGATAAGCCTTGGCGACTGACGCATTGTG--GAGTCCCGCACAGGGCTGGGGTTAGGGACAGCTGCACGTGGCCGGAGGAGAT-GGAGGAACCAGTCCTGACTTTGGGGAACAGAAGCCTGCTGTAACCTTTGTAATAGGAAACGAGGCTGTGGCTACAGGTCTGGAGACCCAGCCTACCTGTCGCCAGCAAGGAGACTGAAGCCTAGCAGGGCTGGGCTCACCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45405778 210 + 49145316 GGATAAGCCTTGGTGACTAAAGCATTGTGGAGAGGACAGCACAGGGCT-GGGTTAGGGACAGCTGCCCATGGCCAGAGGAGAT-GGAGGAACCAGGTCTGACTTTGGAGAACAGAAGCCTGCTGTAGCCTTTGTAATAGGAAAGGAGGCTGTGGTGGTAGGGCTGGAGGC---------------TCAGCAAGGAGACTGAATCCTAGCAGGGCTGGGCCCATCCCA i calJac3.chr22 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I a score=906292.000000 s hg38.chr19_GL949747v2_alt 126611 405 + 729520 ATTCCAGTCACCCCATGCCAGTCACAGGCAGACAGCTGAGCATGTAGACCTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAGCGTGTAGGTGTCCCTAGTGAAGGAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCGCACTGTACAT-ATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTATTTTGAAAATCTCGGCGTAGTATTCCATGCTGCAGAGTCCCACTCACGAGACGTTCCTCTGCTGATGAATGCGTC-GTGGTCTCCGATTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATTGTGGGGAGTGGGTCGTTGGCCCTCCACGGCCCCCAAACAGGGCAGGTGAGAGCATCTGGGGCCTGTGTC s panTro4.chr19 59060665 405 + 63644993 ATTCCAGTCACCCCATGCCAGTCACAGGCAGACAGCTGAGCATGTAGACCTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAGCGTGTAGGTGTCCCTAGTGAAGGAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCGCACTGTACAT-ATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTATTTTGAAAATCTCGGCGTAGTATTCCATGCTGCAGAGTCCCACTCACGAGACGTTCCTCTGCTGATGAATGCGTC-GTGGTCTCCGATTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATTGTGAGGAGTGGGTCGTTGGCCCTCCACGGCCCCCAAACAGGGCAGGTGAGAGCATCTGGGGCCTGTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55937370 406 + 60714840 ATTCCAGTCACCCCATGCCAGTCACAGGCAGACAGCTGAGCATGTAGACCTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAACGTGTAGGTGTCCCTAGTGAAGGAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCACACTGTACAT-ATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTATTTTGAAAATCTCTGCGTAGTATTCCATGCTGCAGAGTCCCACTTACTAGACGTTCCTCTGCTGATGAATGCGTCAGTGGTTTCCAATTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATCGTGAGGAGTGGGTCGTTGGCCCTCCACGGCCCCCAGACAAGGCAGGTGAGAGCATCTGGGGCCTGTGTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59990674 406 + 64156825 ATCCCAGTCACCCCATGCCAGTCAGAGGCAGAGAGCTGAGCATGTAGA-CTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAGCATGTAGGTGTCCCTAGTGAAGCAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCGCACTGTACATAATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTGTTTTGAAAATCTCCGTGCAGTATTCCACGGTGCAGAGTCCCACTTACTAGACGTTCCTCTGCTGATGAATGTGTCAGTCGTTTCCAGTTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATCATGAGGAGTGGCTCATTGGCCCTCCACAGCCCCCAAGCAGGGCAGGCGAGCGCATCTGGGACCTGTGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55015260 406 + 59248254 ATCCCAGTCACCCCATGCCAGTCAGAGGCAGAGAGCTGAGCATGTAGA-CTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAGCATGTAGGTGTCCCTAGTGAAGCAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCGCACTGTACATAATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTGTTTTGAAAATCTCCGTGCAGTATTCCACGGTGCAGAGTCCCACTTACTAGACGTTCCTCTGCTGATGAATGTGTCAGTCGTTTCCAGTTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATCATGAGGAGTGGCTCATTGGCCCTCCACAGCCCCCAAGCAGGGCAGGCGAGCGCATCTGGGACCTGTGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47121513 405 + 51301725 ATCCCAGTCACCCCATGCCAGTCAGAGGCAGACAGCTGAGCATGTAGA-CTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAGCATGTAGGTGTCCCTAGTGAAGCAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCGCACTGTACAT-ATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTGTTTTGAAAATCTCCGTGCAGTATTCCACGGTGCAGAGTCCCACTTACTAGACGTTCCTCTGCTGATGAATGCGTCAGTCGTTTCCAGTTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATCATAAGGAGTGGCTCATTGGCCCTCCACAGCCCCCAAGCAGGGCAGGCAAGCGCATCTGGGACCTGTGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46828733 405 + 50890351 ATCCCAGTCACCCCATGCCAGTCAGAAGCAGACAGCTGAGCATGTAGA-CTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAGCATGTAGGTGTCCCTAGTGAAGCAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCGCACTGTACAT-ATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTGTTTTGAAAATCTCCATGCAGTATTCCATGGTGCAGAGTCCCACTTACTAGACGTTCCTCTGCTGATGAATGCGTCAGTCATTTCCAGTTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATCATGAGGAGTGGCTCATTGGCCCTCCACAGCCCCCAAGCAGGGCAGGCGAGCGCATCTGGGACCTGTGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45405988 365 + 49145316 ---CCCGTCACTCCATGCCAGTCAGAGGCAGACGGCCGAGCATGTAGTCCTCCTGCCTCCTTCAAGACAGGCGGGGGCTCTCCC-------------------------AGAGTGTACTGTTGGCTCATCCTCTGACAAACA--GTAGCGCACTGTAGGT-GTTCTGCAGGTTGGCATTTTCCTCTGTAGTAGGCCACAAACTTGTGTTTTGAAAATCTCTGCGCCGTATTCCATGGTGTAGAGTCCCACTTATTAGACGTTCATCTGCTGATGAGTGCGTCAGTGGTTTC---------CCCCTCAGGTTGATGCTTTTACCTTTCATGGGTAGATCACGAGTAGTGGGTCACTGGCCCTCCATAGTCTCCCAACA--GCAGGCGACAGCATGTGGGGCCTGCGTC i calJac3.chr22 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I e nomLeu3.chr10 102702828 981 - 106955855 M a score=112262.000000 s hg38.chr19_GL949747v2_alt 127016 45 + 729520 AGGCTGCACTTGCTCCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------CT s panTro4.chr19 59061070 45 + 63644993 AGGCTGCACTTGCTCCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------CT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55937776 52 + 60714840 AGGCTGCACTTGCTCCTGCAGCCCCAG---TGCTCAGGCC---AGGCCTCGCTTCCCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59991080 45 + 64156825 AGGCTGCACTTGCTGCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------CT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55015666 45 + 59248254 AGGCTGCACTTGCTGCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------CT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47121918 45 + 51301725 AGGCTGCACTTGCTGCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------CT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46829138 45 + 50890351 AGGCTGCACTTGCTGCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------CT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45406353 45 + 49145316 AGGATAAGCTTGCTCCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------TT i calJac3.chr22 C 0 C 0 s mm10.chr7 3657932 54 + 145441459 AGGCTGAACATTTTTATGCAGCTCAGTCTCTGCTCAGGTCCTGAGACTTAAC----CC i mm10.chr7 I 917 C 0 e canFam3.chr1 19617913 429 - 122678785 I e nomLeu3.chr10 102702828 981 - 106955855 M a score=869051.000000 s hg38.chr19_GL949747v2_alt 127061 265 + 729520 TGTTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATTGAGGACCCTGTGCCAACGCTGCACCTGACCGAGCGAGGTGAGGGACCCAGGATGGTGGGGAAGCAGCGGGCCAAAGAGGAGGGGCT-GCCCCTGACCCATCCTCACCACTGAGGGGGCCGGA----------CCCCCA--CCCTCCCCACAGACATCATCCTGAGCAGTACATCAGCACCTCCGGCCTCAGCCCAGCCGCC s panTro4.chr19 59061115 265 + 63644993 TGTTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATTGAGGACCCTGTGCCAACGCTGCACCTGACCGAGCGAGGTGAGGGACCCAGGATGGTGGGGAAGCAGCGGGCCAAAGAGGAGGGGCT-GCCCCTGACCCATCCTCACCACTGAGGGGGCCGGA----------CCCCCT--CCCTCCCCACAGACATCATCCTGAGCAGTACATCAGCACCTCCGGCCTCAGCCCAGCCGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55937828 266 + 60714840 TGTTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATCGAGGACCCTGTGCCAACGCTGCACCTGACTGAGCGAGGTGAGGGACCCAGGATGGTGGGGAAGCAGTGGGCCAAAGAGGAGGGGCT-GCCCCTGACCCATCCTCACCACTGAGGGGGCCGGA----------CCCCCAC-CCCTCCCCACAGACATCATCCTGAGCAGCACATCAGCACCTCCGGCCTCAGCCCAGCCGCC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59991125 266 + 64156825 CGTTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATTGAGGACCCTGTGCCAACGCTGCACCTGACTGAGCGAGGTGAGGAACCCAGGATGGTGGGGAAGCAGTGGGCCAAAGAGGAGGGGCTGGCCCCTGACCCATCCTCACCACTGA-GGGGCCGGA----------CCCCCAC-CTCTCCCCACAGACATCATCCTGAGCAGCACATCAGCACCTCCGGCCTCAGCTCAGCCACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55015711 266 + 59248254 CGTTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATTGAGGACCCTGTGCCAACGCTGCACCTGACTGAGCGAGGTGAGGAACCCAGGATGGTGGGGAAGCAGTGGGCCAAAGAGGAGGGGCTGGCCCCTGACCCATCCTCACCACTGA-GGGGCCGGA----------CCCCCAC-CTCTCCCCACAGACATCATCCTGAGCAGCACATCAGCACCTCCGGCCTCAGCTCAGCCACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47121963 265 + 51301725 CATTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATTGAGGACCCTGTGCCAACGCTGCACCTGACTGAGCGAGGTGAGGAACCCAGGATGGTGGGGAAGCAGTGGGCCAAAGAGGAGGGGCTGGCCCCTGACCTATCCTCACCACTGA-GGGGCCGGA-----------CCCCAC-CTCTCCCCACAGACATCATCCTGAGCAGCACATCAGcacctccagcctcagctcagcCACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46829183 267 + 50890351 CGTTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATTGAGGACCCTGTGCCAACGCTGCACCTGACTGAGCGAGGTGAGGAACCCAGGATGGTGGGGAAGCAGTGGGCCAAAGAGGAGGGGCTGGCCCCTGACCCATCCTCACCACTGA-GGGGCCGGA----------CCCCCCCGCTCTCCCCACAGACATCATCCTGAGCAGCACATCAGCACCTCCGGCCTCAGCTCAGCCACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45406398 265 + 49145316 GGTTTCCTCCC--CAGGCCCCAGAGCAAACTTTGAGCTCCTTGAAGTCCATGGCAGAACGGGCAGCCATCAGCTCTGGCATTGAGGATCCCGTGCCAACGCTGCACCTGACTGAGCGAGGTGAGGGTCCCGGGATGGTGGGGAAGCAGTGGGCCAAAGAGGAGGGACTGGCCC--GACCCATCCTCACCACTGAGGGGGCCA-------------CCCCCC-CTTTCCCCACAGACATCATCCTCAGTAGCACATCAGCACCTCCGGCCTCAGCCCAGCCACC i calJac3.chr22 C 0 C 0 s mm10.chr7 3657986 255 + 145441459 CTTTCTCTTCC--CAGGCCCCTGAAC---CACTCAGCTCTCTGAAATCCATGGCAGAACGGGCAGCTATCAGCTCTGGTATTGAGGACCCTGTGCCAACGTTACACCTAACTGATCGAGGTGACAGTTATGGGATTGTGGGGAGGGCAAAGGCCAAAAAGGAG---CTGACCC------CATCCTCATCATTGA-AGTGCTTAA----------TGGCC---TCTCCCCTGCAGACATCATCCTGAGCAGCACATCAGCACCACCCACCTCATCCCAGCCACC i mm10.chr7 C 0 C 0 s canFam3.chr1 19618342 273 - 122678785 TGTCTTCTCCCCACAGGCCCCGGAAC---CTCTGAGCTCTCTCAAGTCCATGGCAGAGCGGGCAGCCATCAGCTCCGGCATCGAGGATCCTGTGCCAACGCTGCACCTAACCGAGCGAGGTGAGGGTCTGGGTGAGGCGGGGGCGGGGGCGGCCAGGCAGGTGTAACG-GCAC--ACTCCAGCCTCACCG--GA-GGGCCTGGCCCTGCCACACCCCCCAC-ACCGCCCTGCAGACATCATCCTGAGCAGCACGTCCGCCCCACCAGCCTCAGCTCAGCCGCC i canFam3.chr1 I 429 C 0 e nomLeu3.chr10 102702828 981 - 106955855 M a score=6174823.000000 s hg38.chr19_GL949747v2_alt 127326 1637 + 729520 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCACTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTATCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCTCACCCCTCTGACTCTGAGCGTATTCGGTGAGGGGCCACAGGGAAGGGGGATGGTC-TGGGACT--TGAGTCTTACGGAGGAGGCAGTG---GCTGAA-CCTGTGAGGCTGTGGGT--AGAGCACCAGGCCCCTGACTTGGGCTCTCCA----CTGAAGGTCAGCACCGCCCTGGGTCTTTCTGTACCACCTCCCCCCG-CAGGG-ATGCATGTCTGAGCACCCTTTTGATCACGACAGGAC----------------------TAGTAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCTCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAATTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCACTCCTGGG--------CCCCTGCCCCAAATCCACCTGTCCCCGTCCCCGCCTTCCAGCCCAGAGATGTTAGAACTGCTTGGGTTGACAGCGAGGC--TGGTCCACTGAGGCACACCTCAGCCCCGCTTCCAGTTGCCCACTGGCTCACCC--GCGGCCCCTCCCCAGCCCTGCTCCAGCAGCCC--CAGTCTAGGCCGACCCCACTCTGCTCATCGGC-----ACATTCTCAGGCCTCCCTGGAGACCACTGGGGAGCTGTCCAGCCCCCTCCCAACCCCAGTGAGTCATGAGTGACCTCCACCCTCATCCCCACTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTTCTCCTGATCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCAAGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGCCCTGATGTCCTGCCCCATTCCCCTGGCTCCCCACCCAGTTTGGGGGCCCCCTGATCCCCCTCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTATCTGGCAGCCAAGGCCCTAAAGAAGCAGTCATGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTTGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGCCTCTGCTCCCTTGCCTCCACCTTTCAGCTGGCGCAGTCCCTCAGCCTGACCAAGTACT-CCTCCCTCTGgctgtctgctcagcctggaacaccgccctctcatcctccacttggccagctcctaggcctcctgtaggtctcagcccaaatgtc------ccttcctcaaagaaaccttcctggagccacccagcccagtgcctc s panTro4.chr19 59061380 1639 + 63644993 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCACTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTATCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCTCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGGCCACAGGGAAGGGGGTTGGGC-TGGGACT--CGAGTCTTAGCGAGGAGGCAGTG---GCTGAA-CCTGTGAGGCTGTGGGT--AGAGCACCAGGCCCCTGACTTGGGCTCTCCA----CTGAAGGTCAGCACCGCCCCGGGTCTTTCTCTACCACCTCCCCCCG-CAGGG-ATGCATGTCTGAGCACCCTTTTGATCAGGACAGGAC----------------------TAGTAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCACTCCTGGG--------CCCCTGCCCCAAATCCACCTGTCCCCGTCCCCCGCTTCCAGCCCAGAGATGTTAGAACTGCTTGGGTTGACAGCGAGGC--TGGTCCACTGAGGCACACCTCAGCCCCGCTTCCAGTTGCCCACTGGCTCACCC--GCGGCCCCTCCCCAGCCCTGCTCCAGCAGCCCCTCAGTCTAGGCCGACCCCACTCTGCTCGTCGGC-----ACATTCTCAGGCCTCCCTGGAGACCACTGGGGAGCTGTCCAGCCCCCTCCCAACCCCAGTGAGTCATGAGTGACCTCCACCCTCATCCCCACTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTTCTCCTGACCAGCATT-GGTATGTTCTGTGGCCCCAGCCCCATCTCCAAGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGCCCTGATGTCCTGCCCCATTCCCCTGGCTCCCCACCCAGTTTGGGGGCCCCCTGATCCCCCTCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCATGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTCGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGcctctgctccctcgcctccacctttcagctggcgcagtccctcagcctgaccaagtact-cctccctctggctggctgctcagcctggaacaccgccctctcatcctccacttggccagctcctaggcctcctgtaggtctcagcccaaatgtc------ccttcctcaaagaaaccttcctggagccacccagcccagtgcctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55938094 1635 + 60714840 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCACTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTATCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCTCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGGCCACAGGGAAGGGGGATGGGC-TGGGACT--CGAGTCTTAGCGAGGAGGCAGTG---GCTGAA-CCTGTGAGGCTGTGGGT--AGAGCACCAGGCCCCTGACTTGGGCTCTCCA----CTGAAGGTCAGCACCACCCCGGGTCTTTCTGTACCACCTCCCCCCG-CAGGG-ATGCATGTCTGAGCACCCTTTTGATCAGGACAGGAC----------------------CAGTAGGCAG------CTGGCGC-----TGA--CCTACCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCACTCCTGGG--------CCCCTCCCCCAAATCCACCTGTCCCTGTCCCC-CCTTCCAGCCCAGAGGTGTTAGATCTGCTTGGGTTGGCAGCGAGGC--TGGTCCACTGTGGCACACCTCAGCCCCGCTTCCAGTTGTTCACCGGCTCACCC--GCGGCCCCTCCCCAGCCCTGCTCCAGCAGCCCCTCAGTCTAGGCTGACCCCACTCTGCTCGTCGGC-----ACATTCTCAGGCCTCCCTGGAGACCACTGGGGAACTGTCCAGCCCCCTCCCAACCCCAGTGAGTCATGAGTGACCTCCACCCTCATCCCCACTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTT---CTGACCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCAAGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGCCCTGATGTCCTGCCCCATCCCCCTGGCTCCCCACCCAGTTTGGGGGCCCCCTGATCCCCCTCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTCGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGGTGGcctctgctccctcgcctccacctttcagctggcgcagtccctcaacttgaccaagttct-cgtccctctggctgtctgctcagcctggaacactgccctctcatcctccacttggccagctcctaggcctcctgtaggtctcagcccaaatgtc------ccttcctcaaagaagccttcctggagccacccagcccagtgcctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102703809 1635 - 106955855 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCGCTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTATCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCTCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGGCCACAGGGAAGGGGGATGGGC-TGGGACT--CGAGTCTTAGCGAGGAGGCAGTG---GCCGAA-CCTGTGAGGCTGTGGGT--AGAGCGCCAGGCCCCTGACCTGGGCTCTCCA----CTGAAGGTCAGCACCGCCCCGGGTCTTTCTGTACTACCTTCCCCCG-CAGGG-ATGCATTTCTGAGGACCCTTTTGATCAGGACAGGAC----------------------TAGTAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCACTCCTGGG--------CCCCTCCCCCAAATCAACCTGTCCCTTTCCCCCCTGTCCAGCCCAGAGGTGTTAGAACTGCTTGGGTTGACAGTGAGGC--TGGTCCACTGTGGCACACCTCAGCCCCGCTTCCAGTTGCTCACTGGCTCACCT--GCGGCCCCTCCCCAGCCCTGCTCCAGCAGCCCCTCAGTCTAGGCCAACCCCACTCTGCTCGTCGGC-----ACATTCTCAGGCCTCCCTGGAGACCACTGGGGAACTGTCCAGCCCCCTCTCAACCCCAGTGAGTCATGAGTGATCTCCACCCTCATCCCCACTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTT---CTGACCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCAA-AGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTTAGCCCTGATGTCCTGCCCCATCCCCCTGGCTCCCCACCCAGTTTGGGGGCCCCCTGATCCCCCCCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTCGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCTGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGCCTCTGCTCCCTCGCCTTCACCTTTCAGCCGGCGCAGTCCCTCAGCCGGACCAAGTTCT-CCTCCCTCTGgctgtctgctcagcctggaccaccaccctctcatcctccacttggccagctcctaggcctcctgtaggtcttagcccaaatgtc------ccttcctcaaagaaaccttcctggagccacccagcccagtgcctc i nomLeu3.chr10 M 981 C 0 s rheMac3.chr19 59991391 1630 + 64156825 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCGCTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGTCC-CAGGGAAGGGGGGTGGGC-TGGGGCT--CGAGTCTTAGCAAGGAGGCAGTG---GCTAAA-CCTGTGAGGCTGTGGGT--AGAGCGCCAGGCCCCTGACTCGGGCTCTCCA----CTGAAGGTCAGCACCGCCCTGGGTCTTTCTGTACCACCT-CCCCTG-TGGGG-ATGCAGTTCTGAGCACCCTTTTGGTCAGGGCAAGAC----------------------TAGCAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTG--------CCCCCTACC-CCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTAGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTACTCCCAGTCCTGGG----CCCCCCCCCCCGCCAATTCAACCTGTCCCTGTCCCC-GCTTCCAGCCCAAAGGTGTTAGCACTGCTCGGGTTGAGAGCGAGGC--CAGTCCACTGTGGCTCACCCCAGCCCTTCTTCCAATAGCTTACTGGCTAACCCATGGGGTCCCCCCACAGCCCTGCTCCAGCAGCCCCTCAGTCTAGGCCGACCCCACTCCACTCGTCGGC------CATTCTCAGGCCTCCCTGGAGGCCACTGGGGAACTGTCCAACCTCCTCCCAACCCCAGTGAGTCATGAGTGACCTCCACCCTCATCCCCGCTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTTCTCCTGACCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCACGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGCCCTCATGTCCTGCCCCGTCCCCCTGGCTCCCCACCCAGTTTGGGGGCCCCCTGATCCCCCTCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTTGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGCCTCTGCGCCCTCGCCTCCACCTTTCAGCcggcgcagtccctcagcctgaccacgttct-cctccctcgggctgtctgctcagcctggaacactgccctctcatcctccacttggccagctcctaggcctcctgtgggtcttagcccaaatgtc------ccttcctc--agacaccttcctggcgccacccagcccggtccctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55015977 1642 + 59248254 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCGCTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGTCC-CAGGGAAGGGGGGTGGGC-TGGGGCT--CGAGTCTTAGCAAGGAGGCAGTG---GCTAAA-CCTGTGAGGCTGTGGGT--AGAGCGCCAGGCCCCTGACTCGGGCTCTCCA----CTGAAGGTCAGCACCGCCCTGGGTCTTTCTGTACCACCT-CCCCTG-TGGGG-ATGCAGTTCTGAGCACCCTTTTGGTCAGGGCAAGAC----------------------TAGCAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTAGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCAGTCCTGGG-CCCCCCCCCCCCCCACCAATTCAACCTGTCCCTGTCCCC-GCTTCCAGCCCAAAGGTGTTAGAACTGCTCGGGTTGAGAGCGAGGC--CAGTCCACTGTGGCTCACCCCAGCCCTTCTTCCAATAGCTTACTGGCTAACCCATGGGGTCCCCCCACAGCCCTGCTCCAGCAGCCCCTCAGTCTAGGCCGACCCCACTCCACTCGTCGGC------CATTCTCAGGCCTCCCTGGAGGCCACTGGGGAACTGTCCAACCTCCTCCCAACCCCAGTGAGTCATGAGTGACCTCCACCCTCATCCCCGCTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTTCTCCTGACCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCACGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGCCCTGATGTCCTGCCCCGTCCCCCTGGCTCCCCACCCAGTTTGGGGGCCCCCTGATCCCCCTCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTTGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGCGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGCCTCTGCGCCCTCGCCTCCACCTTTCAGCcggcgcagtccctcagcctgaccacgttct-cctccctcgggctgtctgctcagcctggaacactgccctctcatcctccacttggccagctcctaggcctcctgtgggtcttagcccaaatgtc------ccttcctc--agacaccttcctggcgccacccagcccggtccctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47122228 1643 + 51301725 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCGCTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAGGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGCCC-CAGGGAAGGGGGGTGGGC-TGGGGCT--CGAGTCTTAGCAAGGAGGCAGTG---GCTAAA-CCTGTGAGGCTGTAGGT--AGAGCGCCAGGCCCCTGACTCGGGCTCTCCA----CTGAAGGTCAGCACCGCCCTGGGTCTTTCTGTACCACCT-CCCCTG-TGGGG-ATGCAGTTCTGAGCACCCTTTTGATCAGGGCAGGAC----------------------TAGCAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAgggcccccggggcagcctcgggccccccggcttcgccgccaccgccgccgtcccccctcgggcTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCAGTCCTGGG--ccccccccGCCCCGCCAATTCAACCTGTCCCTGTCCCC-ACTTCCAGTCCAAAGGTGTTAGAACTGCTCAGATTGAGAGCGAGGC--CAGTCCACTGTGGCTCACCCTAGCCCTGCTTCCAATAGCTTACTGGCTAACCCATGGGGTCCCCCCACAGCCCTGCTGCAGCAGCCCCTCAGTCTAGGCCGACCCCACTCCACTCGTCGGC------CATTCTCAGGCCTCCCTGGAGGCCACTGGGGAACTGTCCAACCTCCTCCCAACCCCAGTGAGTCATGAGTGACCTCCACCCTCATCCCCACTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACAttagtttttcttccttctcaaagCTTCTCTGAAAGCAATTTTCACCTCctgtctcattttccttctcctgaCCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCACGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGccctgatgtcctgccccgtccccctggctccccacccagtttgggggccccctgatccccctctccactgttcctcccccaGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTTGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGCCTCTGCGCCCTCGCCTCCACCTTTCAGCCGGTGCAGTCCCTCAGCCTGACCACGTTCT-CCTCCCTCGGGCTGTCTGCTCAGCCTGGAACACTGCCCTCTCATCCTCTACTTGGCCAGCTCCTAGGCCTTCTGTGGGTCTTAGCCCAAATGTC------CCTTCCTCAAAGACACCTTCCTGGCGCCACCCAGCCCAGTGCCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46829450 1629 + 50890351 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCACTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGCCC-CAGGGAAGGGGGGTGGGC-TGGGGCT--CGAGTCTTAGCAAGGAGGCAGTG---GCTAAA-CCTGTGAGGCTGTGGGT--AGAGCGCCAGGCCCCTGACTCGGGCTCTCCA----CTGAAGGTCAGCACCGCCCTGGGTCCTTCTGTACCACCT-CCCCTG-TGGGG-ATGCAGTTCTGAGCACCCTTTTGATCAGGGCAGGAC----------------------TAGTAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCAGGGCAGCCTCGGGCCCCCCAGCTTCACCGCCACCGCCACCGTCCCTCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCTCAGT--------------CCCCACCGCCAATTCAACTTGTCCCTGTTCCC-GCTTCCAGCCCAAAGGTGTTAGAACTGCTCGGGTTGAGAGCGAGGC--CAGTCCACTGTGGCTCACCCCAGCCCTGCTTCCAATAGCTTACTGTCTAGCCCATGGGGCACCCCCAGATCCCTGCTCCAGCAGCTCCTCAGTCTAGGCCAACCCCACTCCACTCGTCAGC-----ACATTCTCAGGCCTCCCTGGAGGCCACTGGGGAACTGTCCAACCTCCTCCCAACCCTAGTGAGTCATGAGTGACCTCCACCCTCATCCCCACTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTTCTCCTGACCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCACGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGCCCTGATGTCCTGCCCCATCCCCCTGGCTCCCCAGCCAGTTTGGGGGCCCCCTGATCCCCCTCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTTGAGCAGGTGAGGGCCCCACCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGCCTCTGCACCCTCGCCTCCACCTTTCAACCGGCGCACTGCCTCAGCCTGACCACGTT----CTCCCTCGGgctgtctgctcagcctggagcactgccctctcatcctccacttggccagctcctaggcctcctgtgggtcttagcccaaatgtc------ccttccacaaagacaccttcctggcgccacccagcccggtgcctc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45406663 1584 + 49145316 CTTGCAGCTGTCAGAGGTCAACATACCGCTGTCGCTGGGTGTCTGTCCACTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCTCATCCCTCTGATTCTGAGCGTATCCGGTGAGGGGCCGCAGGAAAGGGGGTTGGGC-TGGGACT--CGAGTCTTAGTGAGGAGGCAGGG---GACAGA-CCTGTGAGGCTGTGGGTCAAGGGGGCCAGGCCCCTGACCTGGGCTCCCCA----CTGAAGGTCAGCACTGCCCCAGGTCTTTCTGTACCAACCGCCCCCGCCGGGG-ATGCGTTTCTGAGCACTC--TTGATGAGGGCAGGAC----------------------TGGCAAGCAG------CTCACAC-----TGA--CCTTCCTGATGCTCCCACAGGCAGTACCTTCCCCGGAACCCCTGTCCGACACCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACTGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCAGTCCCGGGCCCCCCAGCCCCCTATCTAAATCAGCCTGTGCCTGTTCCC-GCTTCCAGCCCGGAGGTGTTAGAACTGCCTGGGTT------GAGGC--CAGTCGGCCGCAGCATGCCCCAGCCCCGCTTCCAGTGGCTCACTGGCTCACCT--GCAGCCCCTCCCCAGCCCTGATCCAGCAGCCC--CAGTCTAGGCTGACCCCACTCTGCTCATCAGC-----ACATTCTCAGGCCTCCCTGGAGACCACTGGGGAACTGTCCAGC---------------------------------CCACCCTC--CCCCCCTTGGGAAATCTTCTGAATCGCCTCCTCTCCCAGCTCTCATCACACAGCAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAATTAATTTTCACCTCCTGTCTCATTTTCCTTCTCCTGACCAGCATTGGGTATGTTCTGTGCCCC-----------------AGATTGTCCAGCTGAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAG-CCTGATGT-CTGCCCTGTCCCCCTGGCTCCCCACCAAGTTTGGAGGGCCCCTGATCCCCTTCTCCACCTTTACTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGATGAGTTTGAGCAGGTGAGGGCCCCGCCTCCT-CTCTTCCTACTGCTAGGGTTGGGGTGGAGTCCCCAGGCTC--CAGGCAGTCCTTGCCAGcctctgctcccttgcttccacctttcaggtggtgcagtccctcggcctgaccaagctctgcttcactcaggctgtttgctcagccaggagaactg-cctttcctcctccagttggctggctcctaggcctcctgtaggccttagcccaaatggc------ccttcctc--agagaccttcccagagccacctggcccagtgtctc i calJac3.chr22 C 0 C 0 s mm10.chr7 3658241 1507 + 145441459 CCTGCAGCTGTCAGAGGTGAACATACCATTGTCACTGGGTGTCTGTCCACTGGGGCCAGTTTCCCTCACCAAGGAGCAGCTATACCAACAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCCGAGCGCATTCGGTGAGGGGCT-GGAGAAAGGGCTGGGGAC-CGGGACTCCCCAGTCTGAGGGAGGAGCTGGTT---CCTGGGTCCTGAGAGAC--TAGGT--AGAGTACTCG---------------TCTCAAAGTGCTGAGGAC-----TTGACTTGGGGCTCCCTAAAGCAG--------G-TTGAA-GTGTGCTTCTGAACACTCTCCTG---AAGGCAGGGC----------------------TGGAGCTCAGAGCCTCCTGGCAC-----TAAATCCTCACTGGT----CCACAGGCAGTACCTCCCCCGGAACCCTTGCCCGACACCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCAACTGAGACGCTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCAGCTCCGCCGCCACCGCTGCCATCCCCCCTCGGGCTGGAGGGGCGAGGTGGGTGTCCCACTGCGGCCACTGGGACCGCA-CCCCTCCCTA-TCCCAGTCTTGGG----------CCCCCTCAAATTAAACCTGACCCAGTCCCA--------------AAACATTCTAATTGCTAAGATTCAGGGAGAGGCTGCAGGCC-CTAGGCCATGTACAGTTTCCACTGCCAAGAGCT------CTCAGCT------------------CCTG----GGAAACCCTTTAGTTTAGGATAG-------TTGCTGAAGTGCAGTAGACACTCCCAAG---ACCTAGAGACCTCTGCAGAACTGTCTGAC---CTCTTAACTGCAGTGGGTCAG--------CCCCTCCCCATCTCCTCCTGAG---TTTTCTACTTCGTCTCCTTT--CAGCTTTCATTATGCATTAGTTTCTCTTCTTTCTCAAAGCTTTTCTGAAAGCAATTCTCACCTCCTGTCTCATTTTCTT----CTGACCA----T-GGTATGTTTTGTGCTCCCAGCACTGTCTCCAAGTGGACTCTCCA---CAGC--TGGTCTGTGGTGGGGGTCTGGGTCCAGCCCTGATGCCCTGCCCTTGTCCCCCTGCTAGCTACTCAATTTGGATACCTTCTGATCTTTC-CTCTGCATTTTCTTTCCCAGGGAACCAAGGCACAGTACTTGGCAGCCAAGGCCCTAAAGAAGCAGTCCTGGCGATTCCACACCAAGTATATGATGTGGTTCCAGAGGCACGAGGAGCCTAAGACCATCACAGATGAGTTTGAGCAGGTGAGGGGCCCGTCCAAC-CTGGGCCCACTG---GGGTATGGCTAGTGTACCCAATCCCAACCCTCAATCCTTGCTGGCCTTT-CTCCTTTG----------------GGCACAGTCCTGTAGACTGACCAAGCT---GGTTCCCTAAGTGGTTCACCTAGCCTGGGATACTGTC----CATCTCCCATTTGTCCATTTCTTAG---TGCTTTAGTTTTGAGT-----TGTCGTTACTGCTTCCAAAGAGAAGCCTTCTTGGAACT-----GCTAACTGCCTC i mm10.chr7 C 0 C 0 s canFam3.chr1 19618615 1384 - 122678785 CCTGCAGCTGTCAGAAGTGAACATCCCGCTCTCGCTGGGCGTGTGTCCCCTGGGGCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAAGAGGCCGCCTGGCACCATATGCCCCACCCCTCAGACTCCGAGCGGATCCGGTGAGGGACC------AAGACCCCTGAGCGTGGGGAG--GCAGCCCTGATGGGGGGGTATGGTTCCCCAGT-CCTGAGACACTGTGTGA--AG-----------CTTGCTGCTGGTCCTCCA--TGCTG-GGGTGA---------TGGGTACCTGGAAGCTCCCTTGATCCG-TGGGGTGGGCGGCTGTGGTCAC-------ATCAGGTCTAGATTTCTACCCCCACCTCGAGACCGTGGGAATCAT------CAGGCACTAGAATAA--GCCTCCTCTCGT--CCACAGGCAGTACCTCCCCCGGAACCCCTGCCCGACACCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACCGTGGAGTTCTACCAGCGCCTGTCGACTGAGACGCTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACAGGGACCGCACCCCCTCCCTGTCCCCAGTCCTGCC---CTCCCCTCACCCCCCAGGCAAACCTGTCCCCATCCCC-ACTTCA--------------------GCTCAGGCT-------AGGT--TTGTCCACTGTGG------------------------------GGGCTTG-----GGAGCCCCCGCCC-------CTCCGGCCTCC------TGTGGGTGTGCCCCGGTATCCGTCACAGT-----GCAGTCACGG---CCTCTGGAGGCCACTAGAGAACTGTCC--CCTCTGCATGACCCCAGGGAGTTA-GAACCAGCCCCACTCTCATCCTGCCCTGGGAAGCTTCCTGAACTGCCT---------GCTCTCAACACGCAGTAGTTTCTTTTCCTTCTCAAAGCTTCTCTGAAAGCTATT----------------------TCTTCCTGACCAGCAGT-GGTATGTTCTGTGTCCCCA--CCCATCTCCACCTGGACTGTCCAGCCCACCCTCGGTCTACGGCGGGGCCCGGG--TCAGCCCTGATGCCCTG-----TGCCCCTTGCCCCC--ACCAGTTTGGGGGCCCCCTGATCCTTGGCTCCTCCCTTCCTCCCCCAGGGCACAAAGGCGCAGTATCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGGTTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACAGATGAGTTTGAGCAGGTGAGGGCCCCTCGCTGTGCCCTGCCCAC--------------------CCCCAGGCCC--GTGGTCGTC--------------------------------------------------------------GTCCT-CTTCCTCCGGCCCCATTGCT---------------------GGTCCTCCCCTGGGGCATCACCATGG-----------------------TGTC------CCGTCCTC-----------CGGGGAGGCACCTGGCCTATCGTCTC i canFam3.chr1 C 0 C 0 a score=345932.000000 s hg38.chr19_GL949747v2_alt 128963 123 + 729520 ccctttgcagtgctgggcacactcgcttggggtgtgggattttcccagtatgtgtccctgcaccaggctgtgggctctgctgccgagggaccttgat-ggcccccacttcacctccaggtccca s panTro4.chr19 59063019 123 + 63644993 ccctttgcagtactgggcacactcgcttggggtgtgggattttcccagtatgtgtccctgcaccaggctgtgggctttgctgcccagggaccttgat-ggcccccacttcacctccaggtccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55939729 118 + 60714840 cccctcgcagtgctgggcacactcgcttggggtgtggga-tttcccagtatgtgtccctgcgccaggctgtgggctctgctgcccagggaccttgat-g---cccacttca-ctccaggtccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102705444 123 - 106955855 ccccttgcagtgctgggcacactcgcttggggtgtaggattttcccagtatgtgtccctgcaccaggctgtgggctctgctgcccagggaccttgat-ggcccccacttcacctccaggtccca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59993021 123 + 64156825 ccccttgcagtgctgggcacactcgctt-gggtgtgggattttcccggtatgtctccctgtaccaggctgtgggctctgctgcccagggaccttgatgggcccccctttcacctccaggtccca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55017619 123 + 59248254 ccccttgcagtgctgggcacactcgctt-gggtgtgggattttcccggtatgtctccctgtaccaggctgtgggctctgctgcccagggaccttgatgggcccccctttcacctccaggtccca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47123871 122 + 51301725 CCCCTTGCAGTGCTGGGTACACTCGCTT-GGGTGTGGGATTTTCCCGGTATGTCTCCCTGTACCAGGCTGtgggctctgctgcccagggacCTTGAT-GGCCCCCCTTTCACCTCCAGGTCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46831079 122 + 50890351 ctccttgcagtgctgggcacactcgctt-gggtgtgggattttcccggtatgtctccctgtaccaggctgtgggctctgctgcccagggaccttgat-ggtccccctttcacctccaggtccca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45408247 117 + 49145316 ccctgtgccgtgctgggt--actcactt-gggtgtgggattttcccagtgagtctccctgca-caggctgtgggttctgctgcccagggaccttgat-ggccctc--tccaccgccaggtccca i calJac3.chr22 C 0 C 0 s mm10.chr7 3659748 98 + 145441459 CACCATGCAGTCCTGGGTACTTTAGTTGGAAGCATGGGATTTTCTAGTTGGCATTTCCCAAACTTGAC----------------------CTCCAAT-GGCCCC---TTCTCCTTGATTTCCTG i mm10.chr7 C 0 C 0 e canFam3.chr1 19619999 0 - 122678785 C a score=1015057.000000 s hg38.chr19_GL949747v2_alt 129086 293 + 729520 gcactcagcagggcaggggctc-------------agtgccgaaacta-ttttttttgaatgGGCTTCTCAAGTTCTAA--------TACTGGGAAATTCCTGCTGCTTGCA-AACactctggaaccaacctac-ctgggtttcagcccag-tccagctgggcgactctaggcaagtcactcgaacctctgtgtctcaattaacttatctgtaaaaatggggggaagaccacctacctaatgcagttgttatgaagattaaatgagttaataacatgtaagtacttaatggtgac----tgctacatagtcagtgTCATGGA- s panTro4.chr19 59063142 293 + 63644993 gcactcagcagggcaggggctc-------------agtgcggaaacta-ttttttttgaatgGGCTTCTCAAGTTCTAA--------TACTGGGAAATTCCTGCTGCTTGCA-AACactctggaaccaacctac-ctgggtttcagcccag-tccagctgggcgactctaggcaagtcactcgaacctctgtgtctcaattaacttatctgtaaaaatggggggaagaccacctacctaatgcagttgttatgaagattaaatgagttaataacatgtaagtacttaatggtgac----tgctacatagtcagtgTCATGGA- i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 55939847 293 + 60714840 gcactcagcagggcaggggctc-------------agtggggaaacta-gtttttttgaatgGGCTTCTCAAGTTCTAA--------TACTGGGAAATTCCTGCTGCTTGCA-AACactctggagccaacctac-ctgggtttgagcccag-tctagctgggtgactctaggcaagtcactcgaaactctgtgtctcaatttccttatctgtaaaaatggggggaagaagacctacctaatgcagttgttatgaagattaaatgagttaataacatgtaagtacttaatggtgac----tgctacatagtcagtgTCATGGA- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102705567 292 - 106955855 gcactcagcagggcaggggctc-------------agtggggaaact--ttttttttgaatgGGCTTCTCAAGTTCTAA--------TACTGGGAAATTCCTGCCTCTTGCA-AACactctggagccagccttc-ctgggtttgagcccag-tctagctgggtgactcgaggcaagtcactcgaacctctgtgtctcaatttccttatctgtaaaaatggggggaagaagacctacctaatgcagttgttatgaagattaaatgagttaataacatgtaagtacttaatggtgac----tgctacatagtcagtgTCATGGA- i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 59993144 292 + 64156825 gcacccagcagggcaggggctC-------------AGTGGGGAAGCTA--TTTTTTTTAATGGGCTTCTCAAGTTTTAA--------TACTGGGAAATTCCTGCTTCTTGCA-AACactctggagccagcctac-ctgggtttgagcccag-tctagctgggtgactctgggcaagtcactcgaacctgtgtgtctcaatttccttatctgtaaaaatggggggaagaagacctacctaatgcagttgttatgaagattaaatgagttaataacgtgtaagtacttaatggtgac----tgctacatagtcagtgTCATGGA- i rheMac3.chr19 C 0 I 3 s macFas5.chr19 55017742 292 + 59248254 gcacccagcagggcaggggctC-------------AGTGGGGAAGCTA--TTTTTTTTAATGGGCTTCTCAAGTTTTAA--------TACTGGGAAATTCCTGCTTCTTGCA-AACactctggagccagcctac-ctgggtttgagcccag-tctagctgggtgactctgggcaagtcactcgaacctgtgtgtctcaatttccttatctgtaaaaatggggggaagaagacctacctaatgcagttgttatgaagattaaatgagttaataacgtgtaagtacttaatggtgac----tgctacatagtcagtgTCATGGA- i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47123993 293 + 51301725 GCACCCAGCAGGGCAGGGGCTC-------------AGTGgggaagcta-tttttttttaatgggcttCTCAAGTGTTAA--------TACTGGGAAATTCCTGCTTCTTGCA-AACACTCTGGAGCCAGCCTAC-CTGGGTTTGAGCCCAG-TCTAGCtgggtgactctgggcaagtcactCGAACCTCTGtgtttcaatttccttatctgtaaaaatggggGGAAGAAGACCTACCTAATGcagttgttatgaagattaaatgagttaataacgTGTAAGTACTTAATGGTGAC----TGCTACATAGTCAGtgtcatgga- i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 46831201 293 + 50890351 gcacccagcagggcaggggctC-------------AGTGGGGAAGCTA-TTTTTTTTTAATGGGCTTCTCAAGTTTTAA--------TACTGGGAAATTCCTGCTTCTTGCA-AACactctggagccagcctac-ctgggtttgagcccag-tctagctgggtgactctgggcaagtcactcgaacctctgtgtctcaaattccttatctgtaaaaatggggggaagaagacctacctaatgcggttgttatgaagattaaatgagttaataacgtgtaagtacttaatggtgac----tgctacatagtcagtgtcatgga- i chlSab2.chr6 C 0 I 132 s calJac3.chr22 45408364 286 + 49145316 acaccca-----gcacaCACTC-------------AGTGGGGAAGCTTTTTTTTTTTTAATGGTCTTTCCAAGTTCTAA--------CAATTGGCAATTTATGCTTCTTGCA-AATactctggagccagcctac-cagggtttgagcccagctctagctgggtgacttcgggcaagtcacttggacc--tgtgtcttaatttccttatctgtaaaaatggggggaagaggccct-cctaatgcagctgttaggaagatttaatgagttagtaacaggtaagtacttgatggtgac----tgctgcatagtaagtgtcagga-- i calJac3.chr22 C 0 C 0 s mm10.chr7 3659846 273 + 145441459 GCAAACAGCAGAGCAGGGG----------------------GAA-----GTCTGTTTAGTCAGCCTTCTTGAGTCTCAACCATTAGTTGATTGGAAACTCC-ACTCTCCCTA-AATATCCTGAAGCCAGCTGAt-c----------------acccgttgggtgatcttgggcaagtcaatcaagcctcttccttt--gtccccctatctgtaaaaatgggagtaacagaacccacctcatgcagttgttacaaggattaaatgagttaataacatgtaagta-ttgatggtgcctgcttgctatacagtgagcgtcatgaa- i mm10.chr7 C 0 C 0 s canFam3.chr1 19619999 299 - 122678785 ACACCCAGCAGATCAGGGGCTCCTCGGCAAACACAAACAGGGAAGCTG--TATTCTTTAATGACCTTCCCACATGGTGA--------AAATCAGAACTTCCTACTTGTTgcacaacactctgtggccaggctgtgttgggtttgaattcagctccagctgggtgaccttgggcaagtcgcttggacc----tgcctccatgcccttatgtataaacacgagctgacaa--accccatgtgtgcagttgttacaaggattagatgagttaatgacatgtgagtactctgtggtgcc----cgctctgtagt----aCCATGGGG i canFam3.chr1 C 0 C 0 a score=309739.000000 s hg38.chr19_GL949747v2_alt 129379 128 + 729520 TTTTTTTTTTCAAATTACTTTCAGTTGGTGTGTTCT-ACAGTGATG------------TTTTTTTCCACCAAATAC--TTCCCTG-----ATGCCGAGCCCCTTCATGGGGATGAAGTAGTACAAGGTCCTTGTCCTCAGAGAACTCA s panTro4.chr19 59063437 128 + 63644993 TTTTTTTTTTCAAATTACTTTCAGCTGGTGTGTTCT-ACAGTGATG------------TTTTTTTCCACCAAATAC--TTCCCTG-----ATGCCGAGCCCCTTCATGGGGATGAAGTAGTACAAGGTCCTTGTCCTCAGAGAACTCA i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 55940140 128 + 60714840 TTTTTTTTTTCAAATTACTTTCAGTTGGTGTGTTCT-ACAGTGATG------------TTTTTTTCCACCAAATAC--TTCCCTG-----ATGCCGAGCCCCTTCATGGGGATGAAGTATTACAAGGTCCTTGTCCTCAGAGAACTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102705860 128 - 106955855 TTTTTTTTTTCAAATTACTTTCAGTTGGTGTGTTCT-ACAGTGATG------------TTTTTTCCCACGAAATAC--TTCCCTG-----ATGCCGAGCCCCTTCATGGGGATGAAGTATTACAAGGTCCTTCAACCAGGAGAACTCA i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 59993439 126 + 64156825 TTTTTTTTTCCAAATTACTTTCA----GTGTGTTCT-ACAGTGACGT----------TTTTTTTCCCACCAAATAC--TTCCCTG-----AAGCCGAGCCCCTTCATGGGGATGAAGTATTACAAGGTCCTTGTCCTCAGAGAACTCA i rheMac3.chr19 I 3 C 0 s macFas5.chr19 55018037 126 + 59248254 TTTTTTTTTCCAAATTACTTTCA----GTGTGTTCT-ACAGTGACGT----------TTTTTTTCCCACCAAATAC--TTCCCTG-----AAGCCGAGCCCCTTCATGGGGATGAAGTATTACAAGGTCCTTGTCCTCAGAGAACTCA i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47124290 125 + 51301725 tttttttttccaaattacttTCA----GTGTGTTCT-ACAGTGACG-----------tttttttCCCACCAAATAC--TTCCCTG-----AAGCCGAGCCCCTTCATGGGGATGAAGTATTACAAGGTCCTTGTCCTCAGAGAACTCA i papAnu2.chr19 I 4 C 0 s calJac3.chr22 45408650 127 + 49145316 atttttTTTTCAAATTACTTACAGTTGGTGTGTTCT-ACAGTGATT-----------TTTTTTCCCCACCAAAGAC--TTCCCTG-----ATGCCGAGCCCCTTCATGGGGATGAA-TATTGCAAGGTCC-TGTCCTCAGAGAACTCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3660119 120 + 145441459 ----ttttt----attGCTTTCAGTTGGTGTGTTTTAACAGTGGCTTTCCCCATGCACATTTTCCTTACCATACACATTTTCCAGGTACCAAGCTGGGCCTCATCA--------------------ATCCCCATTCTCACAGAAATCT i mm10.chr7 C 0 C 0 s canFam3.chr1 19620298 108 - 122678785 GTGTTGGCTTCTGATAACTTCTAATTGTTGTGTTCC-ACAATG---------------GTTTTTTCTACCCAATAT--TTGCCTG-----ATGCCAAGTTC-----------TGAA------CAAGGCCTCTATCCTCAGAGAACTCG i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46831494 132 + 50890351 I a score=5135684.000000 s hg38.chr19_GL949747v2_alt 129507 1312 + 729520 GTCCCCTCTCCT--G-GTTCTCCCAGGTTGCCATCTTTG-AAGCACTTAAGACATTCATTT----AGAACCTAGGTCCTCTCCCATTG--TGTCCTCAGATGTTAACCACAGACTTCCTGTCCTTTCCTGGTTTGGCCCAAAACCATCCTCCAAGTTAGTACATTTCAGGGCATCCAGTCATTCAGAAATTCCCACACCACTTCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGActctgagactgttccattctctagaacaagggtgacagtacccactgcctcgaggtctttgtgaagattaaatg---cta-----------------ggctgtgcatCCTGTACT--CACGTGAGAGGTGCTCAAAAGCCACAGCCCTCGAGGAAA--CGAAGGCTGTGCACTCACAC------CTGGGGCTGGGGCCCCGTTCTGGCAGCTGGCTTCGGTGGaac--ctctgcggccccctccgtttcctcctcgctgaagt-ggcatgataa-catttcctacccaagaagaaccttgtgaggatgga---tgagagtgtgtgcgtgcagggcagctggcccggtgcctgacacatccacagccctaagaattgtCCCC-TTTGTCTGTTGGTCCGGCCCAGATCCCAGACCACCTCCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAAGCCACGGGGCATCCCCCTCTCCCAGGAAGCAGGGAGGGGGCCGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAGCGGCCTCTCCTGTA-CCCCCTCAGGAG---TCAGTGAGTAAGGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAATTGGGAGTTGTACCGCCGCCGCCGGTCATCCGTCTCGTCTTCTTCCGGCTGACCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGACCTCTCAGCTGCTTCCCTCCGCAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGTGGGGAGAGGAGTGAGGTCAGAAAG s panTro4.chr19 59063565 1316 + 63644993 GTCCCCTCTCCT--G-GTTCTCCCAGGTTGCCATCTTTG-AAGCACTTAAGACATTCGTTT----AGAACCTAGGTCCTCTCCCATTG--TGTCCTCAGACGTTAACCACAGACTTCCTGTCCTTTCCTGGTTTGGCCCGAAACCATCCTCCAAGTTAGTACATTTCAGGGCATCCAGTCATTCAGAAATTCCCACACCACTTCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGActctgagactgttccattctctagaacaagggtgacagtacccactgcctcgaggtctttgtgaagattaaatg---cta-----------------ggctgtgcatCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCACAGCCCTCGAGGAAA--CGAAGGCTGTGCACTCACAC------CTGGGGCTGGGGCCCCGTTCTGGCAGCTGGCTTCGGTGGaacctctctgcggccccctccgtttcctcctcgctgaagt-ggcatgataa-catttcctacccaagaagaaccttgtgagggtgga---tgagagtgtgtgcgtgcagggcagctggcccggtgcctgacacatccacagccctaagaattgtCCCC-TTTGTCTGTTGGTCCGGCCCAGATCCCAGACCACCTCCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAAGCCACGGGGCATCCCCCTCTCCCAGGAAGCAGGGAGGGGGCCGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAGCGGCCTCTCCTGTA-CCCCCTCAGGAG---TCAATGAGTAAGGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAATTGGGAGTTGTACCGCCGCCGCCGGTCATCTGTCTCGTCGTCTTCCGGCTGACCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGCCCTCTCAGCTGCTTCCCTCCGCAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55940268 1316 + 60714840 GTCCCCTCTCCT--G-GTTCTCCCAGGTTGCCATCTTTG-AAGCATTTAAGACATTCATTT----AGAACCTAGCTCCTCTCCCATTG--TGTCCTCAGACGTTAACCACAGACTTCCTGTCCTTTCCTGGTTTGACCCGAAACCATCCTCCAACTTAGTACATTTCAGGGCATCCAGTCATTCAGAAATTCCCACACCACTTCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGActgtgagactgttccattctctagaacaagggtgacagtacccgctgcctcgaggtctttgtgaagattaaatg---cta-----------------ggctgtgcatCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCACAGCCCTCGAGGAAA--CGAAGGCTGTGCACTCACAC------CTGGGGCTGGGGCCCCGCTCTGGCAGCTGGCTCCGGTGGaacctctctgcggccccctccgtttcctcctcgctgaagt-ggcgtgataa-catttcctacccaagaagaacctcgtgagggtgga---tgagagtgtgcgcgtgcagggcagctggcccggtgcctgacacatccacagccctaagaattgtCCCC-TTTGTCTGTTGGTCCGGCCCAGATCCCAGACCACCTCCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAAGCCACGGGGCATCCCCCTCTCCCAGGAAGCAGGGAGGGGGCCGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAGCGGCCTCTCCTGTA-CCCCCTCAGGAG---TCAATGAGTAAGGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAATTGGGAGTTGTACCGCCGCCGCCGGTCATCTGTCTCGTCTTCTTCCGGCTGACCCTCCTGTAGTGTCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGCCCTCTCGGCTGCTTCCCTCTGCAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102705988 1311 - 106955855 GTCCCCTCTCCT--G-GTTCTCCCAGGTTGCCATCTTTG-AAGCATTTAAGACATTCATTT----AGAACCTAGCTCCTCTCCCATTG--TGTCCTCAGACGTTAACTACAGACTTCCTGTCCTTTCCTGGTTTGGCCCAAAACCATCCTCCAAGTTAGTACATTTCAGGGCATCCAGTCATTCAGAAGTTCCCACACCACTTCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGAtt-----tttgagactgttccattctctagaacaagggtgacagtacccgctgcctcaaggtctttgtgaagattaaatg---cta-----------------ggctgtgcatCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCACAGCCCTCGAGGAAA--CGAAGGCTGTGCACTCACAC------CTGGGGCTGGGGCCCCGCTCTGGCAGCTGACTTCGGTGGaatctctctgcggccccctccgtttcctccttgctgaagt-ggcatgataa-catttcctacccaagaagaaccttgtgagggtgga---tgagagtgtgtgcgtgcagggcagttggcccagtgcctgacacatccacagccctaagaattgtCCCC-TTTGTCTGTTGGTCCGGCCCAGATCCCAGACCACCACCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAGGCCACGGGGCATCCCCCTCTCCCAGGAAGCAGGGAGGGGGCCGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAGCGGCCTCTCCTGTA-CCCCCTCAGGAG---TCAATGAGCAAGGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAATTGGGAGTTGTACCGCCGCCGCCGGTCATCTGTCTCTTCTTCTTCCGGCTGACCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCCGCCCGAGCCCTCTCACCTGCTTCCCTCCGCAGCCGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59993565 1307 + 64156825 GTTCCCTCTCCT--A-GTTTTCCCAGGTTGCCATCTTTG-ATGCATTTAAAACATTCATTC----AGGACCTAGCTCCTCTCCCACTG--TGTCCTCAGACATTAACTACAGACTTCCTGTCCTTTCCTGGTTTGCCCCAAAACCATCCTCCAAGTTAGTACATTTCAGGCCATCCAGTCATTCAGAAATTCCCACACCACTGCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGActctgagcctgttccattctctagaacaagggtgacagtacccactgcctcgaggtctttgtgaagattaaatg---cta-----------------ggctatgcatCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCGCAGCCCTCGAGAAAA--CGAAGGCTGTGCACTCATGCCTGGTGCTGGTGCTGGGGCCCCGCTCTGGCAGCTGGCTTCGGTGGaac--ctctgcggccccctccgtttcctcctcgctgaagt-ggc---ataa-catttcctacccaagaagaaccctgtgagggtgca----gtgagtgtgcgcatgcagggcagttggcccggcgcctgacacacCTACAGCCCTAAGAACTGTCCCC-TTTGGCTGTCGGTCCGGCCCAGATCCCAGACCACCTCCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGCGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAGGCCA-GGGGCA-CCCCCTCTCCCAGGAAGCAGGGA-GGGGCCGGGAGGCT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAG----CTCTCCTGTACCCCCCTCAGGAG---TCAATGAGCAAAGTGAGGGTCCTGCTGGCAGGGGCGCCGGGCCAGCTGGGGGTTGAACTGGGAGTTGTACCGCCGCCTCCGGTCATCTGTC---TCTTCTTCCGGCTGAGCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGCCCTCTCAGCTGCTTCCCTCCGAAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55018163 1309 + 59248254 GTTCCCTCTCCT--A-GTTTTCCCAGGTTGCCATCTTTG-ATGCATTTAAAACATTCATTC----AGGACCTAGCTCCTCTCCCACTG--TGTTCTCAGACATTAACTACAGACTTCCTGTCCTTTCCTGGTTTGCCCCAAAACCATCCTCCAAGTTAGTACATTTCAGGCCATCCAGTCATTCAGAAATTCCCGCACCACTGCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGActctgagcctgttccattctctagaacaagggtgaccgtacccactgcctcgaggtctttgtgaagattaaatg---cta-----------------ggctatgcatCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCGCAGCCCTCGAGAAAA--CGAAGGCTGTGCACTCATGCCTGGTGCTGGTGCTGGGGCCCCGCTCTGGCAGCTGGCTTCGGTGGaac--ctctgcggccccctccgtttcctcctcgctgaagt-ggcatgataa-catttcctacccaagaagaaccctgtgagggtgca----gtgagtgtgcgcgtgcagggcagctggcccggcgcctgacacaCCTACAGCCCTAAGAACTGTCCCC-TTTGGCTGTCGGTCCGGCCCAGATCCCAGACCACCTCCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGCGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAGGCCA-GGGGCA-CCCCCTCTCCCAGGAAGCAGGGA-GGGGCCGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTG-CCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAG----CTCTCCTGTACCCCCCTCAGGAG---TCAATGAGCAAAGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAACTGGGAGTTGTACCGCCGCCTCCGGTCATCTGTC---TCTTCTTCTGGCTGAGCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGCCCTCTCAGCTGCTTCCCTCCGAAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47124415 1316 + 51301725 GTCCCCTCTCCT--A-GTTCTCCCAGGTTGCCATCTTTG-ATGCATTTAAGACATTCATTC----AGAATCTAGCTCCTCTCCCACTG--TGTCCTCAGACATTAACTACAGACTTcctgtcctttcctggtttggcCCAAAACCATCCTCCAAGTTAGTACATTTCAGGCCATCCAGTCATTCAGAAATTCCCACACCACTGCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGACTCTGAGCCTGTTCCATTCTCTAGAACAAGGGTGACAGTACCCACTGCCTCGAGGtctttgtgaagattaaatg---ctA-----------------GGCTGTGCATCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCGCAGCCCTCGAGAAAA--CGAAGGCTGTGCACTCACGCctggtgctggggctggggccccGCTCTGGCAGCTGGCTTCGGTGGAAC--CTCTGCGGCCCCCTCCGTTTCCTCCTCGCTGAAGT-GGCATGATAA-CATTTCCTACCCAAGAAGAACCTTGTGAGGGTGCA----GTGAGTGTGGGCGTGCAGGGCAGTTGGCCCGGTGCCTGACACACCTACAGCCCTAAGAACTGTCCCC-TTTGTCTGTCGGTCCGGCCCAGATCCCAGACCACCACCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGcccctccctctacc------caccccctt----ccccccgcatgctgatccccctgcccaggtgagggccctgccctgGAAGACTGGAGGGAGGCCCCAGGCCACGGGGCATCCCCCTCTCccaggaagcaggga-ggggcCGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGgctg-cccctcctcccctccccagtgAGGGACATTTTTTGGTAAAcctattttcattttggaaaatatttatgaataaatagtTTTATATGACGGCTGGCAGCAGCGGCCTCTCCTGTACCCCCCTCAGGAG---TCAATGAGCAAAGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAACTGGGAGTTGTACCGCCGCCTCCGGTCATCTGTC---TCTTCTTCCGGCTGAGCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGCCCTCTCAGCTGCTTCCCTCCGAAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46831626 1316 + 50890351 GTCCCCCCCCCT--G-GTCCTCCCGGGTGGCCACCTTGG-AAGCA-TTAAGGAAATCATTC----CGGACCCAGGTTCCTTCCCCATG--GGGCCTCAGGCCATAAATTAAGGCTTTCTGTCCTTTCCTGGTTTGGCCCAAAACCATCCTCCAAGTTAGTACATTTCAGGCCATCCAGCCATTCAGAAATTCCCACACCACTGCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGActctgagcctgttccattctctagaacaagggtgacagtacccactgcctcaaggtctttgtgaagattaaatg---cta-----------------ggctgtgcatCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCACAGCCCTCGAGAAAA--CGAAGGCTGTGCACTCACGCCTGGTGCTGGGGCGGGGGCCCCGCTCTGGCAGCTGGCTTCGGTGGaac--ctctgcggccccctccgtttcctcctcgctgaagt-ggcataataa-catttcctacccaagaagaaccttgtgagggtgga----gtgagtgtgcgcgtgcagggcagttggcccggtgcctgacacaCCTACAGCCCTAAGAACTGTCCCC-TTTGTCTGTCGGTCCGGCCCAGATCCCAGACCACCTCCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGCGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAGGCCACGGGGCATCCCTCTCTCCCAGGAAGCAGGGAGGGGGCTGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCACCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTACATGACGGCTGGCAGCAGCGGCCTCTCCTGTACCCCCCTCAGGAG---TCAATGAGCAAAGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAACTGGGAGTTGTACCGCCGCCTCCGGTCATCTGTC---TCTTCTTCCGGCTGACCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGCCCTCTCAGCTGCTTCCCTCCGAAGACGTCCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i chlSab2.chr6 I 132 C 0 s calJac3.chr22 45408777 1296 + 49145316 GTCCTCTCTCCT--A-GTTCTCCCAGGCTGCCATTCTTGAAAGCATTTCAGACGTTCATTCATTGAGAAGCTAGCTCCTCTCCCATCG--TGCCCTCAGACATTAACTACTAACCTTCTATCC-TTCTTGGTTTGGCCCAGAACCATCCTCCAAGTTAGCACATTTCAGGGCATCCAGTCACTC--AAATTCCCACACCTCTACCACCGCC-ATAAA--A----TGTCCCTGCAGAATGCTTAGATTTAGGc--tgagcctctcccattctttagaacaagggtgacagtactcactgcctcgaggtctttgtgaagattaaatg---cta-----------------ggccgtgcatCCTGTACTTGCACGAGAGAGGTGCTCAAAAGCCACAGCCCTCGAGAATA--CGAAGGCCTTGTACTCACAC------CTGGAGCTGGGCCC-------------------CGGTGGaacctctctgcagttccctccgtttcctccttgatgaagcgggcatgataa-tgtttccaacccaagaagaaccttgtgagggtgga----atgagtgcgcgtgtgcagggcagctggcccagtgcctggcacatccgcagccctaagaactgtCCCCTTTTGTCTGTTGGTCCGGCCCAGATCCCAGACCACCTCTTCGTCCACTCACTGACCGCCTTCTCCCCTGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCTTCTACC------TACCCCCT------CCCCCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGCAGGGAGGCCCCAGGCCACGGGGCATCCCCCTCTCCCAGGAAGCAGGGAGGGGGCTGGGAGG-T-----TTCCTTTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAGCGGCCTCTCCTGTACCCCCCTCAGGAG---TCAGTGAGCAAGGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAACTGGGAGTTGTACCGCCGCCGGCGGTCATCTGTCTCTTCCTCTTCTGTCTTACCCTCCTTTGGTGCCCGGCCTTGGACCTGGGCCAGCAAGGCCTCCGCTCGAGCCCTCTCAGCCGCCTCCCTCCGAAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCAGGGAGAGGACTGAGGTCAGAAAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3660239 1149 + 145441459 GTTCTGTCCTCT--ATATTCTTCCAGACCAC----TTTG-AAGCATTTCAGACAT----------TTGACCTAGCTGCTTTCTTGGTGTATGCGCTCCAACCTTGACATCAGTCTTCCTATCCTGCCCTGCTTTGGTCCTTGACA------------CGAATATCTTAAGGCATTGAGTCCCTCAGAA--TCTCA----------GTTA-CAGTGAAGTG----TGTATCTCCAGAGTGCT-------AGATGGTACATATGTTGCAT--TGTAGGCCACCTGT--TGGTCCCTACT-CCTCAGTGTC---------ACTTAATAACCTTA-----------------GGCCTTACGT-TTGTAC------------------------CTGCAGCCCATG-----------------------------------TGGGGCAAAGGCCAGGCT------------------------------TGGCCCCC------TTCTTCACTCTTAAGA------------------TCACCAAGGGA----------AGGGTGGAGTCTGACAGTGCAAGCTTGTAGGACAATTGGCTTGGTACTT-------CCATGCCCCTGACAACTA--CCT-CTTGTCCATCTGCCTGGCCCAGATCTCAGTCTCCCTCTTCATCCACTCACTGACCACCTTCTTCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCC--CCCTCTACC------CTCTCCCT------CCCTCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGG-GGGAGGCCCAAGGCCATGGGACA-CCCTCCCCCCCAGGAAGCAGGGAAGGGATAGGGAGGTTTTCTCTTCCTCTCTGCCCTACCCTGGGGGCCTGGGGGCAAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCTGAGGCCTCTCCTA---TCCCCACAAGAGAGTTCAGTGGGCAGGAGTTGGGTTCTGCTGGCGGGGTCGCCGGGCCAGCTGGGGATTGAACTGGGAGTTGTATCGTCGCCTCCGTTCATCTGTCTCTTCTGCTTCCACCTGGCCTTGCTGGGATACCTGGCCTTGTACCCGGGCCAGCAGGGCCTCTGCTCGAGCTCTCTCGGCTGCTTCCCGCTGAAGACGCTCAGCACGGAGCTTTTCTAGGGAAGGTGGCCTGCAGGGAGGAAAGCAAGAACAGAAAG i mm10.chr7 C 0 I 12 s canFam3.chr1 19620406 1260 - 122678785 GTCCCCTCCCCTCAG-TTCTTTTCAGGT-----TCTTTG-CAGCATCTCAGATACTGATGC----AGACCC--GGCCCTTTCCCCGTG--TCCTCTCTGACATTAA--GCAGACTCCCCTCTCTATCCTGGCTTGGGCCAAAGTAATCCTCCAAGTC----CACGGCAAGGCCTCCC-TCCTTCAGAAACACCCACGCCACCACTGTCACCAATAAA--ACATCTATCCCAACAGCGTGCCTGGACTTAGACTC--AGCCTATTCCATTCTCTAGGATG-GGGTAACAG---------CCTCGGGGT-TGTGTGAAGGTC-AATG---CTAGCAGCACACAGCTCGAGGGCTGAGCACCAGCTCCT------------GTGCTCAAGCGCCGCAGCCCTCGGGAGAAGTCAGATGCTGTGTAAATGTGC------GGGGGACTGAGGCCCCAT-------GCTGGCCTTGGTG------CGCCTCTGCCTCCCCGGTTCCTT------TAAAGGGGGCAGGAGAATCTTTTCCTGACCAAAAAGAGCCTGGTGAGGGTGGAAGGAGCTGGCACGTGCATGCAGGCCGCTGGGCCTGGTACCTGGCACGTCCCTGGCCCAGAGATCCGTTTCC-TCTGTCTGTCGGTCCGGCCCAGATTCCTGGCCACCTGCTCGTCCACTCACTGACCACCTTCTCCCCTGGGCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGGCCCTCCCTCTAcccccgcgcgcccccccgcccccccccgcATGCTGACCCCCCTGCCCAGGCTAGGGCCCGGCCCTGGAAGACTGG-GGGAGGCCCCAGGCCTTGGGGCAGCCCTCACCCCCAGGAAGCA---------------------------------GCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCTGCGGCCTCTCCTC---TCCCCCCAGGAG---TCAGTGAGC---GCTGGGGTCTTGCTGGTGGGG-CGCCGGGCCCACTGGGGATTGAACTGGGAGTTGTACCGCCTCCGCCGTTCATCTGTC---TCCTCCTCAGGCTGCTCCTCCTGGGGGGTTGTGCTCCGGACTCGTGCCAGCAGGGCCTCTGCCCGAGCCCGTTCTGTTGCTTCCCGCCGAAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGGGGTCTGGGGGGAGAACACTCAGGTCAGAAAG i canFam3.chr1 C 0 C 0 a score=243658.000000 s hg38.chr19_GL949747v2_alt 130819 83 + 729520 CTGGTAGCCCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCCGCTGCATCCAGCACACC s panTro4.chr19 59064881 83 + 63644993 CTGGTAGCCCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCCGCTGCATCCAGCACACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55941584 83 + 60714840 CTGGTAGCCCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCCGCTGCGTCCAGCACGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102707299 81 - 106955855 CTGGTAGCCCCTAGGAGGCCATT-GCCCAGCCTCTCCCACAGAGGGAGCTG--CCACCT-GAAGCCCCCCTGCATCCAGCATGCC i nomLeu3.chr10 C 0 M 197 s rheMac3.chr19 59994872 83 + 64156825 CTGGTAGCTCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCTGCTGCGTCCAGTACGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55019472 83 + 59248254 CTGGTAGCTCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCTGCTGCGTCCAGTACGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47125731 83 + 51301725 CTGGTAGCTCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCTGCTGCATCCAGTACGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46832942 83 + 50890351 CTGGTAGCTCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCTGCTGCATCCAGTACGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45410073 60 + 49145316 CTGGTAGCCCCTAGGAGGCCGTTCCCCCAACCTCTCCC--AGAGGGAGCTG--CCACCAGGAAC--------------------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19621666 76 - 122678785 CTTATAGCCCCTAGAGG-------TCCCACTTTCCCCCA-AGAAGGAGCTGCCCCACCTGGAACCCCGTCCACCTCTA-CCTGCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3661388 12 + 145441459 I a score=178724.000000 s hg38.chr19_GL949747v2_alt 130902 92 + 729520 CCAGCCTCAGCTCCTTAGGCCTGCTGG-AAGCAGCC-ACTTGGTGCTGGGACGCCATGGGCACGTCTCTGGCCTTCCCTTCTGTGGGCTTTGGT s panTro4.chr19 59064964 91 + 63644993 CCAGCCTCAGCTCCTTAGGCCTGCTGG-AAGAAGCC-ACTTGGTGCTGGGACGCCATGGGCATGTCTCTGGCCTTCCCTTCTGT-GGCTTTGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55941667 92 + 60714840 CCAGCCTCAGCTCCTTAGGCCTGCTGG-AAGAAGCC-ACTTGGTGCTGGGACGCCATGGGCACGTCTCTGGCCTTCCCTTCTGTGGGCTTTGGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59994955 91 + 64156825 CCAGCCTCAGCT-CTCAGGTCTTCTAC-AAGAAGCC-GCTTGGTGCTGGGACACCATGGGCACGTCTCTGGCTTTCCCTTCTGTGGACTTTGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55019555 91 + 59248254 CCAGCCTCAGCT-CTCAGGTCTTCTAC-AAGAAGCC-GCTTGGTGCTGGGACACCATGGGCACGTCTCTGGCCTTCCCTTCTGTGGACTTTGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47125814 91 + 51301725 CCAGCCTCAGCT-CTCAGGCCTTCTGG-AAGAAGCC-GCTTGGTGCTGGGACACCATGGGCACGTCTCTGGCCTTCCCTTCTGTGGACTTTGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46833025 91 + 50890351 CCAGCCTCAGCT-CTCAGGCCTTCTGG-AAGAAGCC-GCTTGGTGCTGGGACACCATGGGCACGTCTCTGGCCTTCCCTTCTGTGGACTTTGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45410133 80 + 49145316 CCAGTCTTGGCTCTTAGGGCCTGCTGG-AAGAAGCC-GCCGGGGGCTGGGACGCCATGGGCG------------TCCCTCCTGTGGGCTTCAGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19621742 71 - 122678785 CTGGTCTGAG------AGGTTTGTGGGTAGGAAGCTGGCCTCATGCTGTG----CAAGGACCCAGGACT-GCCATCACTGCC------------ i canFam3.chr1 C 0 C 0 e mm10.chr7 3661388 12 + 145441459 I e nomLeu3.chr10 102707380 197 - 106955855 M a score=146355.000000 s hg38.chr19_GL949747v2_alt 130994 56 + 729520 CCTCCCCAGTCTTTA----------AAATCTGATGCTTCTCCAGGTCAAGAA--AGCACACTTAGCAG s panTro4.chr19 59065055 56 + 63644993 CCTCCCCAGTCTTTA----------AAATCTGATGTTTCTCCAGGTCAAGAA--AGCACACTTAGCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55941759 56 + 60714840 CCTCCCCAGTCTTTA----------AAATCTGATGCTTCTCCAGGTCAAGAA--AGCACACTGAGCAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59995046 56 + 64156825 CCTCCCCAGTCTTTA----------AGATCTGATGCTCCTCCAGGTCAAGAA--AGCACAAtaagcag i rheMac3.chr19 C 0 I 10 s macFas5.chr19 55019646 56 + 59248254 CCTCCCCAGTCTTTA----------AGATCTGATGCTCCTCCAGGTCAAGAA--AGCACAAtaagcag i macFas5.chr19 C 0 I 10 s papAnu2.chr19 47125905 56 + 51301725 CCTCCCCAGTCTTTA----------AAATCTGATGCTCCTCCAGGTCAAGAA--AGCACAATGAGCAG i papAnu2.chr19 C 0 I 10 s chlSab2.chr6 46833116 56 + 50890351 CCTCCCCAGTCTTTA----------AAATCTGATGCTCCTCCAGATCAAGAA--AGCACAAtgagcag i chlSab2.chr6 C 0 I 10 s calJac3.chr22 45410213 56 + 49145316 CCTCCCCAGTCTTTA----------AAATCTGATGGTCCTCCAGACCAAGAA--AGCACATGGGGCAG i calJac3.chr22 C 0 I 9 s mm10.chr7 3661400 66 + 145441459 CCTACCTGGTCCTTGGACTCACTGCAAGGCCTATGTCCCTTCAGGTCAAGAA--TGCCCACTGAGCAG i mm10.chr7 I 12 I 1 s canFam3.chr1 19621813 39 - 122678785 ----------------------------CCTGATGCCCCTCCAAATCATGAGCTATGATGATGAGCA- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102707380 197 - 106955855 M a score=96993.000000 s hg38.chr19_GL949747v2_alt 131050 27 + 729520 CCCCCTGGCCCTCAGTTTCCCTTTCTA s panTro4.chr19 59065111 27 + 63644993 CCCCCTGGCCCTCAGTTTCCCTTTCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55941815 27 + 60714840 CCCCCTGGCCCTCAGTTTTCCTTTCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102707578 27 - 106955855 CTCTCTGGGCCTCACTTTCCCTTTCTA i nomLeu3.chr10 M 197 C 0 s rheMac3.chr19 59995112 27 + 64156825 ctctctgggcctcagtttccctttcta i rheMac3.chr19 I 10 C 0 s macFas5.chr19 55019712 27 + 59248254 ctctctgggcctcagtttccctttcta i macFas5.chr19 I 10 C 0 s papAnu2.chr19 47125971 27 + 51301725 ctctctgggcctcagtttccctttcta i papAnu2.chr19 I 10 C 0 s chlSab2.chr6 46833182 27 + 50890351 ctctctgggcctcagtttccctttcta i chlSab2.chr6 I 10 C 0 s calJac3.chr22 45410278 27 + 49145316 CTCCCTGGGCCTCAGCTTCCCGTTCTG i calJac3.chr22 I 9 C 0 s mm10.chr7 3661467 27 + 145441459 ATCCTGGGCCCCCTGTATCATTTTCTA i mm10.chr7 I 1 I 1266 s canFam3.chr1 19621852 27 - 122678785 CAGCCAGGACCTCAGTTTCTCCTTCTG i canFam3.chr1 C 0 C 0 a score=396349.000000 s hg38.chr19_GL949747v2_alt 131077 169 + 729520 GAGGA-AAGAAGACTACAGGC-AGTGTACCCCCTCTAGACCAGGGGTGCAGCATCCTGGAGACAGAAGCCTGC-TTTTACTCTC-TAACCcagcagctctcaaactctttggtctcaggacccc----tttatactcttaaaaaccaaggaccccaagagcttttgtttaaatgggt s panTro4.chr19 59065138 169 + 63644993 GAGAA-AAGAAGACTACAGGC-AGTGTACCCCCTCTAGACCAGGGGTGCAGCATCCTGGAGACAGAAGGCTGC-TTTTACTCTC-TAACCcagcagctctcaaactctttggtctcaggacccc----tttatactcttcaaaaccaaggaccccaagagcttttgtttaaatgggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55941842 169 + 60714840 GAAAA-AAGAAGACTACAGGC-AGTATACCCCCTCTAGACCAGGGGTGCAGCATCCTGGAGATATAAGCCTGC-TTTTACTCTC-TAACCcagcacctctcaaactctttggtctcaggacccc----tttatactcttaaaaaccaaggacctcaagagcttttgtttaaatgggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102707605 169 - 106955855 GAGAA-AAGAAGACTACAGGC-AGTGTACCCCCTCTAGACCAGGGATACAGCATCCTGGAGATAGAAGCCTGC-TTTTACTGTC-TAACCcagcggctctcaaactctttggtctcaggacccc----tttatactcttaaaatccaaggaccccaagagcttttgtttcaatgggt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59995139 157 + 64156825 gagaa----aagagTACAGGC-AGTGTACCCCCTCTAGACCAGGGGTA--------TGGAGAC--AAGCCTGC-TTTTACTGTCTTAACCcagcagctctcaaactgtttggtctcaggacccc----tttatactctttaaaactgaggaccctaagagcttttgtttaaatagat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55019739 157 + 59248254 gagaa----aagagtacaggc-agtgtaccccctctAGACCAGGGGTA--------TGGAGAC--AAGCCTGC-TTTTACTGTCTTAACCcagcagctctcaaactgtttggtctcaggacccc----tttatactctttaaaactgaggaccctaagagcttttgtttaaatagat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47125998 160 + 51301725 gAG------AAGAGTACAGGC-AGTGTACCCCCTCTAGACCAGGGGTACAGCATCCTGGAGAC--AAGCCTGCTTTTTACTGTCTTAACCCAGCAGCTCTCAAAC----TGGTCTCAGGATGCC----TTTATACTCTTTAAAACTGAGGACCCTAAGAGCTTTTGTTTAAATAGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46833209 165 + 50890351 gagaa----aagagtacaggc-agtgtaccccctctAGACCAGGGGTACAGCATCCTGGAGAC--AAGCCTGC-TTTTACTGTCTTAACCcagcagctctcaaactgtttggtctcaggacccc----tttatactctttaaaactgaggaccctaagagcttttgtttaaatagat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45410305 153 + 49145316 GAGAAAAAAAAGATTACAGGC-GGC-------------------GGGACAGTATCCTGGGGATAGAAGCCTGC-TCTTACTCTC-TAACCcagtggttctcaaactctttggtcccaggacacacgcgtttatactcttaaaaa--gggggtcccaagagcgtttgtttcaatgggt i calJac3.chr22 C 0 M 842 s canFam3.chr1 19621879 107 - 122678785 --------------TAGGAGCTAGGAGACCTGCTC--------AGGTTTGTCCTCCTTGGGACACAAACCTGC-TCTGAC-----TGACCCCGTGGTTCTCAAAC-----------------------T-------------------AGACCCCAGAAAGCTTTGTGTCAGTGGGT i canFam3.chr1 C 0 I 4 e mm10.chr7 3661494 1266 + 145441459 I a score=814687.000000 s hg38.chr19_GL949747v2_alt 131246 357 + 729520 t----ctcttaatatgctgcaaatcattagtgaaaactaagaaagtttGGacacaagcatc--tgccattggccatcagagtgagggtgtctccccatcacacagcctc--tggaaacctgcactacatgcctgagaacacgagtggaaaagtccaccag----tg-tcaggaaaataggcttgacaccacagcaccccgggaaaggg-tgtcaggacccctagggctccctggaccacatgctgagaaccactTCTCCACCTAGCCAGCCCTTCACGGAGTCCCTGGCTGTCCTGACCAGAGACGCTGCAGTGCCCATGCTGGGCTGCTGCCAAGCCCTGAAGGTCTGGGCCCTGGTCTGCCGAGGTGGG s panTro4.chr19 59065307 361 + 63644993 t----ctcttaatatgctgcaaatcattagtgaaaactaagaaagtttGGacacaagcatc--tgccattagccatcagagcgagggtgtcttctcatcacacagcctc--tggaaacctgcactacatgcctgagaacacgagtggaaaaggccaaaagtgtttg-ttaggaaaataggcttgacaccacggcaccccgggaaaggg-tgtcaggacccctagggctccctggaccacatgctgagaaccactTCTCCACCTAGCCAGCCCTTCACGGCGTCCCTGGCTGTCCTGACCAGAGACCCTGCAGTGCCCATGCTGGGCTGCTGCCAGGCCCTGAAGGTCTGGGCCCTGGTCTGCCGAGGTGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942011 357 + 60714840 t----ctgttaatatgctgcaaatcagaagtgaaaactaagaaagtttGGacacaagcatc--taccattagccatcagagtgagggtgtcttctcatcacacagcctc--tggaaacctgcactacgtgcctgagaacgcgagtggaaaaggccaacag----tg-ttaggaaaataggcttgacaccacggcaccccgggaaaggg-tgtcaggacccctaggcctccctggaccacatgctgagaaccactTCTCCACCCAGCCAGCCCTTCACGGAGTCCCTGGCTGGCCTGACCAGAGACCCTGCAGTGTCCATGCTGGGCTGCTGCCAAGCCCTGAAGGTCTGGGCCCTGGTCTGCCGAGGTGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102707774 348 - 106955855 t----ctgttaatatgttgcaaatcag-agtgaaaactgagaaagtttGGacacaagcgtctgtgccattagccatcagagcgagggtgtcttctcatcacacagcctc--tggacacctgcactgcgtgcctgagaacacgcgtggaaaaggccaacag----tg-ttaggaaaataggcttgacacctcggcaccccgggaaaaggctgtcaggacccctagggctccctggaccacatgctgaga-----------accCAGCCAGCCCTTCAGGGAGTCCCTGGCCGTCCTGACCAGAGACCCTGCAGTGCCCATGCCGGGCTGCTGCCAAGCCCTGAAGGTCTGGGCCCTGGTCTGCTGAGGCGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59995296 359 + 64156825 tctacctgttaatatactgcaaatcagaagtgaaaactaagaaagtttGGacacaagcatctgtgccatcagccgtcagaacgagggtgtcttctcatcacacagcctc--tggaaacctgcactatgtgcctgagaatgcgagtgaaaaaggccaacag----tg-tcaggaaaataggcttgataccacggcaccccgggaaaggg-tggcaggacccctggggcttcctggaccacatgttgagaaccactTC---ACCCAGCCAGCCCTTCACCGAGTCCCTGGTTGTCCTGACCAGAGACCCTGCAGTGCCCATGCTGGGCTGCTGCCAAGCCCTGAAAGTCTGGGCCCTGGTCTGCCGAGG-AGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55019896 359 + 59248254 tctacctgttaatatactgcaaatcagaagtgaaaactaagaaagtttGGacacaagcatctgtgccatcagccatcagaacgagggtgtcttctcatcacacagcctc--tggaaacctgcactatgtgcctgagaatgcgagtgaaaaaggccaacag----tg-tcaggaaaataggcttgataccacggcaccccgggaaaggg-tggcaggacccctggggcttcctggaccacatgttgagaaccactTC---ACCCAGCCAGCCCTTCACCGAGTCCCTGGTTGTCCTGACCAGAGACCCTGCAGTGCCCATGCTGGGCTGCTGCCAAGCCCTGAAAGTCTGGGCCCTGGTCTGCCGAGG-AGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47126158 359 + 51301725 TCTACCTGTTAATATACTGCAAATCAGAAGTGAAAACTAAGAAAGTTTGGACACAAGCATCTGTGCCATCAGCCATCAGAACGAGGGTGTCTTCTCATCACACAGCCTC--TGGAAACCTGCACTATGTGCCTGAGAATGCGAGTGAAAAAGGCCAACAG----TG-TTAGGAAAATAGGCTTGATGCCACAGCACCCCGGGAAAGGG-TGGCAGGACCCCTGGGGCTTCCTGGACCACATGTTGAGAACCACTTC---ACCCAGCCAGCCCTTCACCGAGTCCCTGGTTGTCCTGACCAGAGACCCTGCAGTGCCCATGCTGGGCTGCTGCCAAACCCTGAAAGTCTGGGCCCTGGTCTGCCGAGG-AGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46833374 359 + 50890351 tctacctgttaatatactgcaaatcagaagtgaaaactaagaaagtttGGacacaagcatctgtgccatcagccatcagaacgagggtgtcttctcatcacacagcctc--tggaaacctgcactatgtgcctgagaacgcgagtgaaaaaggccaacag----tg-ttaggaaaataggcttgataccacagcaccccgggaaaggg-tggcaggacccctggggcttcctggaccacatgttgagaaccactTC---ACCCAGCCAGCCCTTCACCGAGTCCCTGGTTGTCCTGACCAGAGACCCTGCAGTGGCCATGCTAGGCTACTGCCAAGCCCTGAAAGTCTGGACCCTGGTCTGCCGAGG-AGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19621990 257 - 122678785 ----TCTATTGCTATTTTGCA---TAGAAGCG-------AGAAAACCTTGAAACAAGGTTA--CGTCCCCAGTCACCACA------GTGTCTCTTCA-CGCCCTGTCTCTTTAGAAGC---CACTGGACAATCAAGGCT--GAGTG--AAGGGTCACAGG----GGCTCAGGAAAACCAGCTTGCCTCTGCAG-ACCCCCTGCTAGGG-CGTTGGAGCCCCAAAG----------CCACACGTGGCGAGCCGCCTCCCCAGGCCCCCAGCCCCTCAC---------------CCTGA------------CAGCACCAATGCA-----GCTGCCCA------------------------------------ i canFam3.chr1 I 4 C 0 e mm10.chr7 3661494 1266 + 145441459 I e calJac3.chr22 45410458 842 + 49145316 M a score=999202.000000 s hg38.chr19_GL949747v2_alt 131603 286 + 729520 GT----CTTCTTACTCCTTGGGTCGCTGCTTCTCAGACCCCTC---CTTTTCCTTTCTGCTGCGACTGCCTTCATCACCGCCGTGCTGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGCAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCGGGCGGGGGGC---CCCCTCGCCCTGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCGCTGCACTCTGGCCCAGGTATGTCAGGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG s panTro4.chr19 59065668 286 + 63644993 GT----CTTCTTACTCCTTGGGTCGCTGCTTCTCAGACCCCTC---CTTTTCCTTTCTGCTGCGATTGCCTTCATCACCGCTGTGCTGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGCAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCTGGGCGGGGGGC---CCCCTCGCCCTGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCACTGCACTCTGGCCCAGGTATGTCAGGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942368 290 + 60714840 GTCTTCCTTCTTACTTCTTGGGTCGCTGCTTCTCAGACCCCTC---CTTTTCCTTTCTGCTGCAATTGCCTTCATCACCGCTGTGCCGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGCAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCGGGCGGGGGGC---CCCCTCGCCCTGGAGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCGCTGCACTCTGGCCCAGGTATGTCAGGATGCCCAGAGCCTTCTCTTGTCTCTCCTGAGGGGGCCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708122 290 - 106955855 GTCTTCCTTCTTACTCCTTGGGTCGCTGCTTCTCAGACCCCTC---CTTTTCCTTTCTGCTGCGATTGCCTTCATCACCGCTGTGCCGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGCAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCGGGCGGGGGGC---CCCCTCGCCCTGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCGCTGCACTCTGGCCCAGGTATGTCAAGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59995655 290 + 64156825 GTCTTCCTTCTTACTCCTTGGGTCGCAGCTTCTCAGACCCCTCCTTCTTTTCCTTTCTGCTGCAACTGCCT---TCACCGCTGTGCCGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGAAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCAGGAGGGGGCC---CCCCTCGCTCTGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCGCTGCACTCTGGCCCAGGTACGTCAGGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020255 290 + 59248254 GTCTTCCTTCTTACTCCTTGGGTCGCAGCTTCTCAGACCCCTCCTTCTTTTCCTTTCTGCTGCAATTGCCT---TCACCGCTGTGCCGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGAAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCAGGAGGGGGCC---CCCCTCGCTCTGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCGCTGCACTCTGGCCCAGGTACGTCAGGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47126517 287 + 51301725 GTCTTCCTTCTTACTCCTTGGGTCGCTGCTTCTCAGacccctc---cttttcctttctgctgcaATTGCCT---TCACCGCTGTGCCGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGAAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCAGGCGGGGGGC---CCCCTCGCTCCGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCGCTGCACTCTGGCCCAGGTACGTCAGGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46833733 290 + 50890351 GTCTTCCTTCTTACTCCTTGGGTCGCTGCTTCTCAGACCCCTCCTTCTTTTCCTTTCTGCTGCAATTGCCT---TCACCGCTGTGCCGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGAAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCAGGCGGGGGGC---CCCCTCGCTCCGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCTGCTGCACTCTGGCCCAGGTACGTCAGGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3662760 277 + 145441459 GT----ATTCTTACTCTCGGGGTCGTTGTTTCTGAGG---------CCGTTCCTCTCTGGAAGGACGGCTT---TCACTGCTGTGC---CTTTTCTTTGCCAGGTGCTTCTGCATCTCTTTCAAGGGATCCAGTCGGTTCTTGATCTTCTCATCTGGGCTTGGGCCTGGAGGGCAGCAGTCCTTTTGCCCTGGGGGGAGCTGGTACCAAGGAGGCTGAGTTTGGGCCTCTGCTGCACTCTGGCCCAAGTAAGTCAGGATACCTAGTGCTTTCTCTTGTCTCTCCTGCAGAGGCAAG i mm10.chr7 I 1266 C 0 s canFam3.chr1 19622247 285 - 122678785 -----CTTCCTTACACTTCAGGCCGCTGCTTCTCAGGCTTCTC---CTTCCCCTTCCTGCCATGGCCACCATTGTCCCCACTGTGCCGTCTCTTCCTCCTCAAGTGCTTCTGTATCTCCTGTAGAGGGTCCAGGCGGTTCTTGATCTTTTCATCTGGACCTGGGCTGAGCTGGGGGG---CCCCTTGCCGTGGGGGTAGCTGATACCAAGGCAGCTGAGTCTGGGCTTCTGCTGCACTCTGGCCCAGGTAGGTCAGGATGCCCAGAGCTTTCTCCTGCCTCTCCTGAGGGGGACAG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45410458 842 + 49145316 M a score=142995.000000 s hg38.chr19_GL949747v2_alt 131889 46 + 729520 GAAATACAAGAGATGTGATATAATCTTTCAAGGTGTC--AGGTGTGTC s panTro4.chr19 59065954 46 + 63644993 GAAATACAAGAGATGTGATGTAATCTTTCAAGGTGTC--AGGTGTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942658 46 + 60714840 GAAATACAAGAGATGTGATATAATCTTTCAAGGTGTC--AGGTGTGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708412 46 - 106955855 GAAATACAAGAGATGGGATATAATCTTTCAAGCTGTC--AGGTGTGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59995945 46 + 64156825 GAAATACAAGAGATGGGATATAATCTTTCAAGGTGTC--AGGTGTGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020545 46 + 59248254 GAAATACAAGAGATGGGATATAATCTTTCAAGGTGTC--AGGTGTGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47126804 46 + 51301725 GAAATACAAGAGATGGGATATAATCTTCCAAGGTGTT--AGGTGTGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46834023 46 + 50890351 GAAATACAAGAGCTGGGATATAATCTTTCAAGGTGTC--AGGTGTGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45411301 46 + 49145316 GAAATAAAAGAGATGGGATATAATCTTTCAGGGTGTC--AGGTTTATC i calJac3.chr22 M 842 C 0 s mm10.chr7 3663037 46 + 145441459 --AAAACAAAATAGTCTTTTCAGTCCCTCTGGGAGCCCTAGATGTGGC i mm10.chr7 C 0 I 98 s canFam3.chr1 19622532 30 - 122678785 --------AAAGAGGGAA--------CTGAGGATGTC--AGCGATGTC i canFam3.chr1 C 0 C 0 a score=305095.000000 s hg38.chr19_GL949747v2_alt 131935 124 + 729520 TCCCTGACACAGG------TATCTAAGCGAACAG-GTATCTAAGGCTTGT----------------TATGAACCAGTTGGACCAGGTGCTGGGGATGGAAGACA--AACAGAGGCAAAGCTCC--CCCT-GGGGGGACAGTAGCAGGTACAG s panTro4.chr19 59066000 124 + 63644993 TCCCTGACACAGG------TATCTAAGCGAACAG-GTATCTAAGGCTTGT----------------TATGAACCAGTTGGACCAGGTGCTGGGGATGGAAGACA--AACAGAGGCCAAGCTCC--CCCT-GGGGACACAGTAGCAGGTACAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942704 127 + 60714840 TCCCTGACACAGG------TATCTAAGCGaacag-gtatctaaggcttgt----------------tatgaaccagttgtaccaggtgctggggatggaagacaccaacagaggccaagctcc--ctCTGGGGGGGACAGTAGCAGGTACAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708458 126 - 106955855 TCCCTGACACAGG------TATCTAAGCGAACAG-GTATGTAAGGCTTAT----------------TATGAACCAGTTGTACCAGGTGCTGGGGTTGGAAGACACCAACAGAGGCCAAGCTCC--CCCT-CCGGGGACAGTAGCAGGTACAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59995991 121 + 64156825 TCCCTGACATAGG------AATCTAAGCAAACAG-GTACCTAAGGCTTGT----------------CATGAACCAGTTGTACCAGGTGCTGGGGATGGAAGACACCAACAGAGGCCAAGTTCC--CCCT-GGGGGGACAGTGGCAG-----G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020591 121 + 59248254 TCCCTGACATAGG------AATCTAAGCAAACAG-GTACCTAAGGCTTGT----------------CATGAACCAGTTGTACCAGGTGCTGAGGATGGAAGACACCAACAGAGGCCAAGTTCC--CCCT-GGGGGGACAGTGGCAG-----G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47126850 126 + 51301725 TCCCTGACATAGG------AATCTAAGCAAACAG-GTACCTAAGGCTTGT----------------CATGAACCAGTTGTACCAGGTGCTGGGGACCGAAGACACCAACAGAGGCCAAGTTCC--CCCT-GGGGGGACAGTGGCAGGTACAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46834069 126 + 50890351 TCCCTGACATAGG------AATCTAAGCAAACAG-GTACCTAAGGTTTGT----------------CATGAACCAGTTGTACCAGGTGCTGGGGATGGAAGACACCAACAGAGGCCAAGTTCC--CCCT-GGGGGGACAGTGGCAGGTACAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45411347 112 + 49145316 TCCCTGAC----------------------ACAG-GTATCTAAGGCCTAT----------------GGTGAAGCAGCTGTGCCAGGTGCTGGGGAGGGAAGAGACCAGCAGAGGCCAAGCTCCTGCCCT-GGGGTGACGATAGCAGGGACAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19622562 131 - 122678785 TCC---ACTCAGGGAGCCCTACCTGTGACAACAGAATCCCCCAGGCTCCTGGACAGGTAGAAGCAGCATGAGTCAACTCAGCCATTTTT------CCAAGGACA--------GGTGGGCCTCC--TGCA-CTGGGCAGAGTGTCAATTCAA- i canFam3.chr1 C 0 C 0 e mm10.chr7 3663083 98 + 145441459 I a score=351898.000000 s hg38.chr19_GL949747v2_alt 132059 114 + 729520 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGCAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGGAGCGAT s panTro4.chr19 59066124 114 + 63644993 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGCAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGGAGCGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942831 114 + 60714840 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGGAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGAAGCGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708584 111 - 106955855 TAAC----AGCA-GGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGCAGGCATCTTTGC--AGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGGGAAGCGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996112 114 + 64156825 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGCAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGGAGCCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020712 114 + 59248254 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGCAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGGAGCCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47126976 114 + 51301725 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGCAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGGAGCCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46834195 111 + 50890351 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTAAGT----GTTCAGAGGCAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGGAGC--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45411459 96 + 49145316 TCACAGAAAGCAGAGGAAGGAGGGGATGGGGTGGAGCTGCCTGAAT----GTTCAGAGGCAGGCATCTTTGC-------------------------AGGGAG-CAAGCAAAGCAAGAGGACCCGT i calJac3.chr22 C 0 C 0 s mm10.chr7 3663181 114 + 145441459 TATC----TGCAGGAGGAGGAAGAAAG-AGAGGCTGCGGCCTGTGCAGTAGTGAAGATGGGAGAAGCTTTGGGAACAG-T-TTAAGGAAAAACCTGCAGAA----AAGCAAAGT-GGAGGAGTGAT i mm10.chr7 I 98 I 254 s canFam3.chr1 19622693 119 - 122678785 TAACAAAAAACACAAGGGGGAAGGACA-GGGTGCAGCTGCTTTAGG----GTTCAGAGGCA-GCATCTTTGGGGAGATACTTTAAAGATGAACCTGAAAGCCCGCCAGCAAGGC-AAAGGAGTGAG i canFam3.chr1 C 0 C 0 a score=105273.000000 s hg38.chr19_GL949747v2_alt 132173 32 + 729520 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGAT s panTro4.chr19 59066238 32 + 63644993 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942945 32 + 60714840 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708695 32 - 106955855 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996226 32 + 64156825 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020826 32 + 59248254 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127090 32 + 51301725 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46834306 28 + 50890351 ----GGGGTCA--GCAAGTCCAGA-----------------GACAGCAGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45411555 32 + 49145316 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGGT i calJac3.chr22 C 0 I 12 s canFam3.chr1 19622812 49 - 122678785 --GCGAGACAAAGGCAAGTTCAGAGTTTGGTGGGAACCCCTGAAAGTGGGT i canFam3.chr1 C 0 C 0 e mm10.chr7 3663295 254 + 145441459 I a score=32452.000000 s hg38.chr19_GL949747v2_alt 132205 11 + 729520 AAATGACAAGA s panTro4.chr19 59066270 11 + 63644993 AAATGACAAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942977 11 + 60714840 GAGTGACAAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708727 11 - 106955855 GAGTGACAAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996258 11 + 64156825 GAGTGACAAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020858 11 + 59248254 GAGTGACAAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127122 11 + 51301725 GAGTGACAAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46834334 11 + 50890351 GAGTGACAAGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19622861 11 - 122678785 AAGTGACAGGA i canFam3.chr1 C 0 I 90 e mm10.chr7 3663295 254 + 145441459 I e calJac3.chr22 45411587 12 + 49145316 I a score=297474.000000 s hg38.chr19_GL949747v2_alt 132216 126 + 729520 GCTGATGTACCtc---ttttttttgagatggagtctcgctctgttgcccagactcgagtgcagtggcacgatctcggctcactgcaacctctgcttcccaggttcaagcaatcctcctacctcagcccc s panTro4.chr19 59066281 129 + 63644993 GCTGATGTACCtctttttttttttgagatggagtctcgctctgttgcccagactcgagtgcagtggcacgatctcggctcactgcaacctctgcttcctaggttcaagcaatcctcctgcctcagcccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942988 127 + 60714840 GCTGACGTACCGC--tttttttctgagatggagtctcgctctgttgcccagactcgagtgcagtggcacgatctcggctcactgcaacctctgcttcccaggttcaagcagacctcctgcctcagcccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708738 126 - 106955855 GCTGAGGTACCtc---ttttttttgagatggagtctcgctctgttgcccagactcgagtgcagtggcacgatctcagctcactgcaacctctgcttcccaggttcaagcaatcctcctgcctcagcccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996269 127 + 64156825 GCTCATGTACCTG--tttttttttgagatgcagtctcgctctgttgcccaggctcgagtgtagtggcaccatctcggctcactgcaacctctgcctcccaggttcaagcaatcctcctgcctcagcccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020869 127 + 59248254 GCTCATGTACCTG--tttttttttgagatgcagtctcgctctgttgcccaggctcgagtgtagtggcaccatctcggctcactgcaacctctgcctcccaggttcaagcaatcctcctgcctcagcccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127133 126 + 51301725 GCTCATGTacctg---ttttttttgagatgcagtctcgctctgttgcccaggctctagtgcagtggcaccatctcggctcactgcaacctctgcctcccaggttcaagcaatcctcctgcctcagcccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46834345 126 + 50890351 GCTCATGTACCTG---ttttttttgagatgcagtctctctctgttgcccaggcttgagtgcagtggcaccatctcggctcactgcaacctctgcctcccaggttcaagcaatcctcctgcctcagcccc i chlSab2.chr6 C 0 I 4359 e mm10.chr7 3663295 254 + 145441459 I e canFam3.chr1 19622872 90 - 122678785 I e calJac3.chr22 45411587 12 + 49145316 I a score=295792.000000 s hg38.chr19_GL949747v2_alt 132342 188 + 729520 ccgagtagctgggattacaggcacacaccaccatgcccagctaatttttgtatttttagtagagacggggttttgccatgtttggccaggctggtcttgaacttctgacctcaggtgatccacccacgttggcctcccaaagtgctgggattacaggcgtgagccaccatgcacagccACTGATGTAC s panTro4.chr19 59066410 188 + 63644993 cctagtagctgggattacaggcacacaccaccatgcccagctaatttttgtatttttagtagagacggggttttgccatgtttggccaggctggtcttgaacttctgacctcaggtgatccacccacgttggcctccccaagtgctgggattacaggcgtgagccaccatgcacggccACTGATGTAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55943115 186 + 60714840 cctagtagctgggtttacaggcacacaccactatgcccagctaatttttgta--tttagtagagacggggttttgccgtgtttggccaggctggtcttgaacttctgacctcaggtgatccacccatcttggcctcccaaagtgctgggattacaggcgtgagccaccatgcatggccACTGATGTAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708864 188 - 106955855 cctagtagctgggattacaggcacacaccaccatgcacagctaatttttgtatttttagtagagagcgggttttgccatgtttggccaggctggtcttgaacttctgacctcaggtgatccacccaccttgacctcccaaagtgctgggattacaggcatgagccaccatgcacggccACTGATGTAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996396 147 + 64156825 cctagtagctgggattacaggcacgcaccaccatgcccggctaatttttatatttttagtacagacggggttttgccatgtttggccaggctggtcttg---------------------------------------aaTGTGCTGGAATTACAGGTGTGAGCCACCATGCATGACCA--GACATAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020996 186 + 59248254 cctagtagctgggattacaggcacgcaccaccatgcccggctaatttttgtatttttagtacagacggggttttgccatgtttggccaggctggtcttgaactcctgacctcaggtgatccatccaccttggcctcccaatgtgctgggattacaggtgtgagccaccatgtacgaccA--GACATAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127259 185 + 51301725 cc-agtagctgggattacaggcacgcaccaccatgcccggttaatttttgtatttttagtagagacggggttttgccatgtttggccaggctggtcttgaactcctgacctcaggtgatccatccaccttggcctcccaatgtgctgggattacaggtgtgagccaccgtgcacgacCA--GACATAc i papAnu2.chr19 C 0 C 0 e mm10.chr7 3663295 254 + 145441459 I e canFam3.chr1 19622872 90 - 122678785 I e calJac3.chr22 45411587 12 + 49145316 I e chlSab2.chr6 46834471 4359 + 50890351 I a score=561883.000000 s hg38.chr19_GL949747v2_alt 132530 265 + 729520 CTTTTACACTTGATCTTAGCCAAAAAGCAAGAG------GCGATTGATTCACt------------t----tttgtttgattgttttgagatggggtctcgctc-tgtcacccaggctggagtgcagtggcgcaatctcggcttactgcagcttccacctcctggg-tcaagcgattctcctgcttcagcttcc-------ctgggattacaggcgcgcaccaccatgcccggctaattttttttgtatttt---tagagataccatgttgacc-aggctggtcttgaactcctgacctca s panTro4.chr19 59066598 271 + 63644993 CTTTTACACTTGATCTTAGCCAAAAAGCAAGAG------GCAATTGATTCACt------------t----tttgtttgattgttttgagatggggtctcgctc-tgtcacccaggctggagtgcagtggcacaatctcggcttactgcagcttccacctcctggg-tcaagtgattctcctgcttcagcctcccgagtagctgggattacaggcgcgcaccaccacgcccggctaa-tttttttgtatttt---tagagataccatgttgacc-aggctggtcttgaactcctgacctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55943301 272 + 60714840 CTTTTACACTTGATCTTAGCCAAAAAGCAAGAG------GCGATTGATTCACt------------t----tttgtttgattgttttgagatggggtctcgctc-tgtcacccaggctggagtacagtggcgcagtctcggcttactgcaacttccacctcctggg-tcaagcgattctcctgcttcagcctcctgagtagctgggattacaggcgcacaccaccacgcccggctaa-tttttttgtatttt---tagagataccatgttgaccaaggctggtcttgaactcctgacctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102709052 275 - 106955855 CTTTTACACTTGATCTTAGCCAAAAAGCAGGAG------GCGATTGATTCACt------------ttttgtttgtttgtttgttttgagatggggtctcgctc-tgtcatccaggctggagtgcagtggcgcaatctcggctcactgcaacttccacctcccagg-tcaagtgattctcctgcttcagcctcccaagtagctgggattacaggcacgcaccaccatgcccagctaa-tttttttgtatttt---tagagataccatgttgacc-aggctggtcttgaactcctgacctca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996543 279 + 64156825 TTTTTACACTTGATCTTAGCCAAAAGGCAAGAG------GCGAATGATTCGCC--ttttttttttt----ttctctttttttttttgagatggggtctcgctc-tgtcacctgggctggagtgcagtggcgcaatctcagctcactgcaacttccacctcccagg-tcaagcgattctcctgcttcagcctcc-aagtagct-ggattacaggcgtgcaccaccacacttggctta-tttttttgtatttt---tagagataccatgttgacc-aggctggtcttgaactcctgacctca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55021182 282 + 59248254 TTTTTACACTTGATCTTAGCCAAAAGGCAAGAG------GCGAATGATTCGCCttttttttttttt----ttttctttttttttttgagatggggtctcgctc-tgtcacccgggctggagtgcagtggcgcaatctcagctcactgcaacttccacctcccagg-tcaagcgattctcctgcttcagcctcc-aagtagct-ggattacaggcgtgcaccaccacacttggcttattttttttgtatttt---tagagataccatgttgacc-aggctggtcttgaactcctgacctca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127444 278 + 51301725 tttttacacttgatcttagccaaaaggcaaGAGCAAAAAGCGAatgatttgcc---------tttt----ttttttttttttttttgagatggggtctcgctc-tgtcacccgggctggagtgcagtggcgcaatctcagctcactgcaacttccacctcccggg-tcaagcgattctcctgcttcagcctcc-aagtagct-ggattacaggcgtgcaccaccacacttggctta-tttttttgtatttt---tagagataccatgttgacc-aggctggtcttgaactcctgacctca i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45411599 268 + 49145316 CTTTTACACTCGATCTTAGCCAAAAGGCAAGAA------GTGAT--GTTCACt----------ttt----tttttttttttttcctgagattgagtctcactcttgccacccaggctagagtgctgtggcacgatctcagctcactgcagcttccacctcctgggttcaagcgattctcctgcctcagcctct---------gggactaaaggtgcatgccaccatgctcagctaactttttttgtatttttagtagagataccatgttgacc-aggctggtcttgaactcctgaccgcg i calJac3.chr22 I 12 C 0 e mm10.chr7 3663295 254 + 145441459 I e canFam3.chr1 19622872 90 - 122678785 I e chlSab2.chr6 46834471 4359 + 50890351 I a score=222547.000000 s hg38.chr19_GL949747v2_alt 132795 74 + 729520 ggtgatccacccgcctcagcctcccaaggtggtgggattacaggcgtgagccacagcC-GGCTGATTTAAATTTT s panTro4.chr19 59066869 74 + 63644993 ggtgatccacccgcctcagcctcccaaggtggtgggattccaggcgtgagccacagcC-GGCTGATTTAAATTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55943573 74 + 60714840 ggtgatccaccggcctcagcctcccaaggtgctgggattacaggcgtgagccacagcC-GGCTGATTTAAATTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102709327 74 - 106955855 ggtgatccacccgcctcagcctcccaaagtgctgggattacaggcgtgagccacagcC-GGCTGATTTAAATTTT i nomLeu3.chr10 C 0 I 270 s rheMac3.chr19 59996822 74 + 64156825 ggtgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccacagcT-GGCTGATTTACATTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55021464 74 + 59248254 ggtgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccacagcT-GGCTGATTTACATTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127722 74 + 51301725 ggtgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccatagct-ggctgatttacatttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46838830 74 + 50890351 ggtgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccacagcT-GGCTGATTTACATTTT i chlSab2.chr6 I 4359 C 0 s calJac3.chr22 45411867 75 + 49145316 ggtgatctgcccacctcagtttcccaaaatgctgggattacaggcatgagccaccacCAAGCTGATTTAGATTTT i calJac3.chr22 C 0 C 0 e mm10.chr7 3663295 254 + 145441459 I e canFam3.chr1 19622872 90 - 122678785 I a score=218485.000000 s hg38.chr19_GL949747v2_alt 132869 73 + 729520 TAAAAGCCCATC-AGGTTTGAGACTCCTCCAGTTTGGAGAACTGAGCGGTTTGCCCAGCAGCTGGGGACCTCTA s panTro4.chr19 59066943 73 + 63644993 TAAAAGCCCATC-AGGTTTGAGACTCCTCCAGTTTGGAGAACTGAGCGGTTTGCCCAGCAGCTGGGGACCTCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55943647 73 + 60714840 TAAAAGCCCATC-AGGTTTGAGACTCCTCCAGTTTGGAGAACTGAGCGGTTTGCCCAGCAGCTGGGGACCTCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102709671 73 - 106955855 taaaaGCCCATC-AGGTTTGAGACTCCTCCAGTTTGGAGAACTGAGCTGTTTGCCCAGCAGCTGGGGACCTCTA i nomLeu3.chr10 I 270 C 0 s rheMac3.chr19 59996896 74 + 64156825 TAAAAGCCTATCAAGGTTTCAGACCCCTCCAGTTTTGAGAACTGAGCAGTTTGCCTAGCAGCTGGGGACCTCTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55021538 74 + 59248254 TAAAAGCCTATCAAGGTTTCAGACCCCTCCAGTTTTGAGAACTGAGCAGTTTGCCTAGCAGCTGGGGACCTCTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127796 73 + 51301725 taaaagcccatC-AGGTTTCAGACCCCTCCAGTTTCGAGAACTGAGCAGTTTGCCTAGCAGCTGGGGACCTCTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46838904 73 + 50890351 TAAAAGCCCATC-AGGTTTCAGACCCCTCCAGTTTTGAGAACTGAGCAGTTTGCCTAGCAGCTGGGGACCTCTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45411942 73 + 49145316 TAAAAGCTCATC-AGGTTTGAGACCCCTCCAGTTTGGAGACCTGAGCAGTTCACCTAGCAGCTGGGGATCTCGA i calJac3.chr22 C 0 C 0 e mm10.chr7 3663295 254 + 145441459 I e canFam3.chr1 19622872 90 - 122678785 I a score=99369.000000 s hg38.chr19_GL949747v2_alt 132942 31 + 729520 GCATCTACCTCCAAC-CCCTGTGGGCGCCCAG s panTro4.chr19 59067016 31 + 63644993 GCATCTACCTCCAAC-CCCTGTGGGCGCCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55943720 31 + 60714840 GCATCTACCTCCAAG-CCCTGTGGGCGCCCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102709744 31 - 106955855 GCATCTACCTCCAAG-CCCTGTGGGCGCCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996970 31 + 64156825 GCATCTACCTCCAAG-CCCTGTGGGTGCCCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55021612 31 + 59248254 GCATCTACCTTCAAG-CCCTGTGGGTGCCCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127869 31 + 51301725 GCATCTACCTCCAAG-CCCCGTGGGTGCCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46838977 31 + 50890351 GCATCTACCTCCAAG-CCCTGTGGGTGCCCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45412015 31 + 49145316 GCATCTACCTCCAAG-CCCTGAGGGCACCCAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19622962 29 - 122678785 GCACCCACTTCCAAGCCCCTGCAGGGAGG--- i canFam3.chr1 I 90 C 0 e mm10.chr7 3663295 254 + 145441459 I a score=8422861.000000 s hg38.chr19_GL949747v2_alt 132973 2501 + 729520 ACGGCAATAGCCAACGCTTTTTGAGTGTCATGCCTTGGTATGGTCCTAAA---TTCTGTGTGTTCACTCTTGTTTGACCTTGGTCACAACCAATGGCTAAAGTGCCCCCTCCCTCCA------ACTCGATTCATGGCCCCT--CTGATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCCTCTGATCACTCCTTTCCCTTCCTCCAGCAGCTCCCGAAACAGGTCCACAGGGCCAGAACCTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTCCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATAGGCAGGACATTCAGAACCTAGAGGT------A-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGCAGTC------------------------------CAGGGT--GCTGGGGTTATG-AGAAAGGGAGCACTAGGCGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGGTGAGGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTCC--CTTTCAAATAGTAAACCACGGGTCATCAAGGATGTATGGGAGGAGGTCCCTGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTA----------TGCATTA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTGACTACCCCAAGT-----------------------------------------------CTGCTGAAGCCCT-----------------------GTCCCCTGCC----------------------------TTCAGGACGCGGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCTAGACTACCTCC---------------------------CACCCACGGCGG---AGGATCAGACTAGCTAAGGAAATGAAAGTTGGGTGTACACCAAACAGATTTAAAGAGCCATACGGAAAGCCCGTGTTTGTGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGTGCA-CGAAAGGGCTCGCC------CGATGGCGTGGAGCCTGGC-TGTCCGCCTCTCCTTAAAATGTGCcttcccctcactgaagccatctcacttcgtgcaacagagatgacagtgcccctctaagaacgaacagtgcttattggggattccgcaagtcaggtgcacggcatgtagttagcatac----agtagatgctcaataaatagGCTGTGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGGGttcacggattcattaaatg---ttaagcttctcttttgtgctagacactgttccagccatgtgaaatacatcagtgggggaaaAACTAAGACGAGGGCGAGATCAAGGAAGGTTTCGTGGAAGTGGGCACAAGGTTTGCGGGGCAACGTCCTCGAAAGTGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACATTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAACCGCGGCGCCTGCGCGCTGGGCCC-CGGAGCGCCGCCCTGCCGGCTTCCGAGCTTACCTCTTGCTGAGCCAGCAGCACCCTCCGCTCACGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGATG-CCCCCCTTTTTCTTGTCCCTACTTCGACCGCGGATTGGTTCCGAATTAGTTGGTACGGCCC--CCTGGCCTGTAGCGACAGGTGATTGGCTGAGACGCCCTTTATCACAGCGAATGCTAGGCGTTCGGCTCGTGGTATCCCCTAGCAACCGCCTCTTGTCACAGATCTGAACCAATCATAAGTTGGCCCGCCCCT-GATGCTACCAGATGCGGCCGTCGATTG-------------GCCGACATGACCGACAAGTCTCCTTGCGGAAGAGCGCTCTGCACCGACAAACATGCCCGTACATTTGATTGGCTCCTGCCCCGCTGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGGAAGATCACC-CGAGAGTCAGGGACGT-GGCG-----GCGAGGGGCCCTGGAaatctccagataccaaagctggaagggcgtggagtcttctccagttctcctag-tttacagatgttgtgacctaggcttaCAATGGGCCTGGGGTCTG---AAAGCGGGACGT-----------GGGCTGCGGGGGTCAAAGAGCCGGTTTGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------GGGCAAAGAGAGGTGGAGGTGAGACAATCCTCTTCCC-CAACCCCTTTCCATGTTCCCCA--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTGTCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccagAGCCACAGTGTACGCCATCAGGATGCTGAAGGAGACAGGAACGGAAGCCACTCCTGACACGCTCTTCCATTATATCCAAACGTCTGGctccttcgaagccagg s panTro4.chr19 59067047 2493 + 63644993 ACGGCAATAGCCAACGCTTTTTGAGTGTCATGCCTTGGTATGGTCCTAAA---TTCTGTGTGTTCACTCTTGTTTGACCTTGGTCACAACCAATGGCTAAAGTGCCCCCTCCCTCCA------ACTCGATTCATGGCCCCT--CTGATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCCTCTGATCACTCCTTTCCCTTCCTCCAGCAGCTCCCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTCCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATAGGCAGGACATTCAGAACCTAGAGGT------A-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGCAGTC------------------------------CAGGGT--GCTGGGGTTATA-TGAAAGGGAGCACTAGGCGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGGTGAGGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTCC--CTTTCAAATAGTAAACCACGGGTCATCAAGGATGTATGGGAGGAGGTCCCTGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTA----------TGCATCA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTCACTACCCCAAGT-----------------------------------------------CTGCTGAAGCCCT-----------------------GTCCCCTGCC----------------------------TTCAGGACGCGGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCTAGACTACCTCC---------------------------CACCCACGGTGG---AGGATCAGACTAGCTAAGGAAATGAAAGTTGGGTGTACACCAAACAGATTTAAAGAGCCATACAGAAAGCCCGTGTTTGTGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGCGCA-CGAAAGGGCTCGCC------CGATGGCGTGGAGCCTGGC-TGTCCGCCTCTCCTTAAAATGTGTcttcccctcactgaagccatctcacttcgtgcaacagagatgacagtgcccctctaagaacgaacagtgcttattggggattccgcaagtcaggtgcacggcatgtagttagcatac----agtagatgctcaataaatagGATGTGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGGGttcacggattcattaaatg---ttaagcttctcttttgtgctagacactgttccagccatgtgaaatacatcagtgggggaaaAACTAAGACGAGGGCGAGATCAAGGGAGGTTTCGTGGAAGTGGGCACAAGGTTTGCGGGGCAACGTCCTCGAAAACGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACATTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAAccgcggcgcctgcgcgctgggccc-cggagcgccgcccggccggcTTCCGAGCTTACCTCTTGCTGAGCCAGCAGCACCCTCCGCTCACGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGCTG-CCCCCCTTCTTCTTGTCCCTACTTCGACCGCGGATTGGTTCCGAATTAGTTGGTACGGCCC--CCTGGCCTGTAGCGACAGGTGATTGGCTGAGACGCCCTTTATCACAGCGAATGCTAGGCGTTCGGCTCGTGGTATCCCCTAGCAACCGCCTCTTG--------CTGAACCAATCATAAGTTGGCCCGCCCCT-GATGCTACCAGATGCGGCCGTCGATTG-------------GCCGACATGACCGACAAGTCTCCTTGCGGAAGAGCGCTCTGCATCGACAAACATGCCCATACATTTGATTGGCTCCTGCCCTGCTGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATATATGGAAGATCACC-CGAGAGTCAGGGACGT-GGCG-----GCGAGGGGCCCTGGAaatctccagatagcaaagctggaagggcttggagtcttctccagttctcctag-tttacagatgttgtgacctaggcttaCAATGGGCCTGGGGTCTG---AAAGTGGGACGT-----------GGGCTGCGGGGGTCAAAGAGCCGGTTTGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------GGGCAAAGAGAGGTGGAGGTGAGACAATCCTCTTCCC-CAACCCCTTTCCATGTTCCCCA--GGGACCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCTCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccagAGCCACAGTGTACGCCATCAGGATGCTGAAGGAGACAGGAACGGAAGCCACTCCTGACACGCTCTTCCATTATATCCAAACGTCTGGctccttcgaagccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55943751 2491 + 60714840 ATGGCAATAGCCAACGCTTTTTGAGTGTCATGCTTTGGTATGGCCCTAAA---TTCTGTGTGTTCACTCTTGTTTGACCTTGGTCGCAACCAATGGCTAAAGTGCCCCCTCCCCCCA------ACTCGATTCATGGCCCCT--CTGATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCTTCTGATCACTCCTTTCCCTTCCTCCAGCAGCTCCCGAAACAGGTCGACAGGGCCAGAACCTGGGGCTCCTGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTCCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATCGGCAGGACATTCAGAACCTAGAGGT------A-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGTAGTC------------------------------CAGGat--gctggggttata-agaaagggagcactaggcgcctaaaagaggcacctgtcct---agctgggggtgagggtagg---------------cagatgaggcaacgc------ctgggttTCGTAAGCTCC--CTTTCAAATAGTAAACCACGGGACATCAAGGATGTATGGGAGGAGGTCCCAGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTA----------TGCATTA-GGCCAGACGATCTGAATTCTAGCCATGCCTCCAAGTCACTACCCCAAGT-----------------------------------------------CTGCTGAAGCCCT-----------------------GTCCCCCGCC----------------------------TTCAGGACGCGGCTTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCCAGACTACCTCC---------------------------CACCCACAGTGG---AGGATCAGACTAGCTAAGGAAGTGAAAGTTGGGTGTACACCAAAC--ATTTAAGGAGCCATACAGAAAGCCCGTGTTTGTGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGTGCA-GGAAAGGGCTCGCCCGATGGCGATGGCGTGGAGCCTGGC-TGTCCCCCTCTCCTT-AAATGTGCcttcccctcactgaagccatctcacttcgtgcaacggagatgacagtgtccctctaa----gaacagtgcttattggggattccgcaagtcaggtgctctgcatgtagttagcatac----agtaggtgctcaataaatagGCTGTGCAGGCAAACTAAAAAATGATCCGAATTTCCGTGAACTGTCCAAGGGttcacggattcattaaatg---ttaagcttctcttttgtgctagacactgttctagccacgtgaaatacatcagtgggggaacaactaagacgaGGGCGAAATCAAGGGAGGTTTCGTGGAAGTGGGCACAAGGTTTGCAGAGCAACGTCCTCGAAAACGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACACTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAACCGCGGCGCCTGCGCGCTGGGCCC-CGGAGCTCCGCCCGGCCGGCCTCCGAGCTTACCTCTTGCTGAGCCAGCAGCACCCTCCGCTCACGCGCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACACGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGATGCCCCCCCTTCGTCTTGTTCCTACTTCGACCGCAGATTGGTTCCGAATTAGTTGGTACGGCCC--CCTGGCCTGTAACGACAGGTGATTGGCTGAGACGCCCTTTATCACAGCGAGTGCTAGGCGTTTGGCTCGTGGTATCCCCTAGCAACCGCCTCTTGTCACAGATCTGAACCAATCATAAGTTGGCCCGCCCCT-GATGCTACCAGATGCGGCCGTCGATTG-------------GCCGACATGACCGTCAAGCCTCCTTGCGGAAGAGCGCTCTGCACCGACAAACATGCCCGTACATTTGATTGGCTCCTGCCCTGCTGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGGAAGATCACC-CGAGAGTCAAGGACGT-GGCG-----GCGAGGGGCCCTGGAAATCTCCAGATACCAAAGCTGGAAGGGCGTGGAGTCTTCTCTAGTTCTCCTAG-TTTACAGATGTTGTG----------ACAATGGGCCTGGGGTCTG---AAAGTGGGACGT-----------GGGCTGCGGGGGTCAAAGAGCCGGTTTGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------GGGCAAAGAGAGGTGGAGGTGAGACAATCCTCTTCCC-CAACCCCTTTCCATGTTCCCCA--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCTCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccagAGCCACAGTGTACGCCATTAGGATGCTGGAGGAGACAGGAACGGAAGCCACTCCTGACACGCTCTTCCATTATATCCAAATATCTGGctccttcgaagccagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102709775 2499 - 106955855 ATGGCAATAGCCAACGCTTTTTGAGTGTCATGCTTTGATAAGGTCCTAAA---TTCTGTGTGTTCACTCTTGTTTGACCTTGGTCACAACCGATGGCTAAAGTGCGCCCTCCCCCCA------ACTCGATTCATGGCCCCT--CTGATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCTTGTCGCTTTTCTTCCTCGTACTCTTTATTGCTTCTGATCACTCCTTTCCCTTCCTCCAGGAGCTCCCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGCTCTGATGTCTGGCTTTCTTCCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATAGGCAGGACATTCAGAACCTAGAGGT------A-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGTAGTC------------------------------CAGGGT--GCTGGGGTTATA-AGAAAGGAAGCACTAGGCGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGATGATGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTCC--CTTTCAAATAGTAAGCCACGGGTCATCAAGGATGTATGGGAGGAGGTCCCTGGCCTAAACCAAAGAGGTTCCTAACCTCAAATGAGGCAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTA----------TGCATTA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTCACTACCCCAAGT-----------------------------------------------CTGCTGAAGCCCT-----------------------GTCCCCCGCC----------------------------TTCAGGACGCGGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCCAGACTACCTCC---------------------------CACCCACGGTGG---AGGATCAGACTAGCGAAGGAACTGAAAGTTGGGTGTACACCAAACAGATTTAAGGAGCCATACAGAAAGCCCGTGTTTATGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGTGCA-GGAAAGGGCTCGCC------CGATGGCGTGGAGCTTGGC-TGTCCCCCTCTCCTT-AAATGTGCCTTCCCCTCActtaagctatctcacttcgtgcaacggagatgacagtgcccctctaagaacgaacagtgcttattggggattccgcaagtccagtgctctgcatttagttagcatac----agtaggtgctcaataaatagGCTGTGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGGGTTCACGGATTCATTAAATG---TTAAGCTTCTCTTTTGTGCTAGACACTCTTCCAGCCATGTGAAATACATCAGTGGGGGAAAAACTAAGACGAGGGCGAGATCAAGGGAGGTTTCGTGGAAGTGGGCACAAGGTTTGCAGAGCAACGTTCTCGAAAACGGG-------------ATCGGCGCCTGGTCCGGAATTTCACACGGGACACACTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAACCGCGGCGCCTGCGTGCTGGGCCC-CGGAGCTCCGCCCGGCTGGCCTCCGAGCTTACCTCTTGCTGAGCCAGCAGTACCCTCCGCTCACGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGGCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGATG-CCCCCCTTCTTCTTGTTCCTACTTCGACCGCAGATTGGTTCCGAATTAATTGGTACGGCCC--CCTGGCCTGTAACGACAGGTGATTGGCTGAGACACCCTTCATCACAGCGAATGCTAGGCGTTCGGCTCGTGGTATCCCCTAGCAACCGCCTCTTGTCACAGATCCGAACCAATCATAAGTTGGCCCGCCCCT-GATGGTACCAGATGCGGCCGTCGATTG-------------GCCGACATGACCGTCAAGTCTCCTTGCGGAAGAGCGCTCCGCACTGACAAACATGCCCATACATTTGATTGGCTCCTGCCCTGCTGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGAAAGATCACC-CGAGAGTTAGGGACGC-CGCGTCCCTGCGAGGGGCCCTGGAaatctccagataccaaagctggaagggcgtggagtcttctccagttctcctag-tttacagatgttgtgacctaggcttaCGGTGGGCCTGGGGTCTG---ATAGTGGGACGT-----------GGGCTGCGGGGGTCACAGAGCCGGTTTGGTGGAGGTCAGCGCCACAGTGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------GGGCAAAGAGAGGTGGAGGTGAGACAGCCCTCTTCCC-CAAC------CCATGTTCCCCA--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCTCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccagAGCCACAGTGTACGCCATCAGGATGCTGGAGGAGACAAGAACGGAAGCCACTCCTGACACGCTCTTCCATTATATCCACACGTCTGGctccttcgaagccagc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59997001 2477 + 64156825 ATGG-------CAACACTTCTTAAGTGTCATGCTTTGGTATGGTTCTAAA---TTCTGTGTGTTCGTTCTCGTTTGACCTTGATCACAAGCAGTGGCTAAAGTGCCCTCTCCCCCCA------ACTCGATTCATGGCTCCT--CTAATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCCTCTGATCACTCCTTTCCCTTCCTCCAGCAGCTCCCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTTCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATAGGCAGGGCATTCAGAACCTAGAGGT------G-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGCAGTC------------------------------CAGGGT--GCTGGGGTTATA-AGAAAGGGAGCACTAGACGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGGTGAGGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTGC--CTTTCAAATCGTAAACCACGGGTCATCAAGGATGGCTGGAAGGAGGTCCCTGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTAGACCAA--ACTGCATTA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTCACTACCCCAAGT--------------------------------------------CGACTGCTGAAGCCCT-----------------------GTCCCCCGCC----------------------------TTCAGGACGCAGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTAAGATTCTAAAAACCCAGACTACCTCC---------------------------CACCCACTGTGG---AGGATCAGACTAGCTAAGGAACTGAAAGTTGGGTGTACACCAAACAGATTTAAGGAGCCATACAGAAAGCCCGTGTTTGTGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGTGCA-GGAAAGGGCTCGCC------CGATGGCGTGGAGCCTGGC-TGTCCCCCTCTCCTT-AAATGTGCCTTCCCCTCACTGAAGCCATCTCACTCCGTGCAACGGAGATGACAGTGCCCCTCTAAGAACGAACAGTGCCTCCTGgggattccgcaagtcaggcgctctgcatgtagttagcatac----aataggtgctcaataaatAAACTGCGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGCGCtcatgtattcattaaatgtttttaagctgctcttttgtgctagacactgttccagccatgtgaaatacatcagtgggggga-aactaagacgaaggCGAGATCAAGGGAGGTTTCGTGGAAGTGGCCACAAGGTTTGCAGAGCAACGTCCTCGAAAACGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACACTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAACCGCGGCGCGTGCGCGCTGGGCTC-CGGCGGTCAGCCCGGCCGGCCTCCGAGCTTACCTCTTGCTGAGCCAGCAGCGCCCTCCGCTCACGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGATG-CCCCCCTTCCTCTTGTCCCTACTTCGACCGCAGATTGGTTCCGAATTAGTTGGTACGGCCC--CCTGGCCTGTAACGACAGGTGATTGGCTGAGACGTCCTTT-TCACAGCGAATGTTAGGCGTTCGACTCGTGGTATCCCCTAGCAACCGCCTCTTATCACAGATCTGAACCAATCATAAGTTGGCCCGCCCC--GATGCTACCAGATGCGGCCGTCGATTG-------------GTCGACATGACCGTCAAGTCTCCTTGCGGAAGTGCGCTCCGCACCGACAAACATGCCCATACATTTGATTGGCTCCTGCCCTGCGGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGAAAGATCACC-CGAGAGTCAGGGACGT-GGCG-----GCGAGGGGCCCTGGAaatctccagataccaaagctggaagggcgtggagtcttctccagttctcctag-tttacagatgttgtgacctaggcttaCAATGGGCCTGGGGTCTG---AAAGTGGGGCGT-----------GAGCTGCGGGGGTCAAAGAGCCGGTTCGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------CGGCAAAGAGAGGTGGAGGTGTGGCAGCCCTCTTCCC-CAGCCCCTCTCCGTGTTCCCCG--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCCCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccCGAGCCACAGTGTACGCCATCAGGATGCTGGAGGAGACAGGAACGGAAACCACTCCTGACACGCT---------------------------CTTCGAAGTCAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55021643 2477 + 59248254 ATGG-------CAACACTTCTTAAGTGTCATGCTTTGGTATGGTTCTAAA---TTCTGTGTGTTCGTTCTCGTTTGACCTTGATCACAAGCAGTGGCTAAAGTGCCCTCTCCCCCCA------ACTCGATTCATGGCTCCT--CTAATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCCTCTGATCACTCCTTTCCCTTCCTCCAGCAGCTCCCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTTCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATAGGCAGGGCATTCAGAACCTAGAGGT------G-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGCAGTC------------------------------CAGGGT--GCTGGGGTTATA-AGAAAGGGAGCACTAGACGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGGTGAGGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTGC--CTTTCAAATCGTAAACCACGGGTCATCAAGGATGGCTGGAAGGAGGTCCCTGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTAGACCAA--ACTGCATTA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTCACTACCCCAAGT--------------------------------------------CGACTGCTGAAGCCCT-----------------------GTCCCCCGCC----------------------------TTCAGGACGCAGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCCAGACTACCTCC---------------------------CACCCACTGTGG---AGGATCAGACTAGCTAAGGAACTGAAAGTTGGGTGTACACCAAACAGATTTAAGGAGCCATACAGAAAGCCCGTGTTTGTGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGTTCA-GGAAAGGGCTCGCC------CGATGGCGTGGAGGCTGGC-TGTCCCCCTCTCCTT-AAATGTGCCTTCCCCTCACTGAAGCCATCTCACTCCGTGCAACGGAGATGACAGTGCCCCTCTAAGAACGAACAGTGCCTCCTGgggattccgcaagtcaggcgctctgcatgtagttagcatac----aataggtgctcaataaatAAACTGCGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGCGCtcatgtattcattaaatgtttttaagctgctcttttgtgctagacactgttccagccatgtgaaatacatcagtgggggga-aactaagacgaaggCGAGATCAAGGGAGGTTTCGTGGAAGTGGCCACAAGGTTTGCAGAGCAACGTCCTCGAAAACGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACACTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAACCGCGGCGCGTGCGCGCTGGGCTC-CGGCGGTCAGCCCGGCCGGCCTCCGAGCTTACCTCTTGCTGAGCCAGCAGCGCCCTCCGCTCACGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGATG-CCCCCCTTCCTCTTGTCCCTACTTCGACCGCAGATTGGTTCCGAATTAGTTGGTACGGCCC--CCTGGCCTGTAACGACAGGTGATTGGCTGAGACGTCCTTT-TCACAGCGAATGTTAGGCGTTCGGCTCGTGGTATCCCCTAGCAACCGCCTCTTATCACAGATCTGAACCAATCATAAGTTGGCCCGCCCC--GATGCTACCATATGCGGCCGTCGATTG-------------GTCGACATGACCGTCAAGTCTCCTTGCGGAAGTGCGCTCCGCACCGACAAACATGCCCATACATTTGATTGGCTCCTGCCCTGCGGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGAAAGATCACC-CGAGAGTCAGGGACGT-GGCG-----GCGAGGGGCCCTGGAaatctccagataccaaagctggaagggcgtggagtcttctccagttctcctag-tttacagatgttgtgacctaggcttaCAATGGGCCTGGGGTCTG---AAAGTGGGGCGT-----------GAGCTGCGGGGGTCAAAGAGCCGGTTCGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------CGGCAAAGAGAGGTGGAGGTGTGACAGCCCTCTTCCC-CAGCCCCTCTCCGTGTTCCCCG--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCCCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccCGAGCCACAGTGTACGCCATCAGGATGCTGGAGGAGACAGGAACGGAAGCCACTCCTGACACGCT---------------------------CTTCGAAGTCAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127900 2452 + 51301725 ATGG-------CAACACTTCTTAAGTGTCATGCTTTGGTATGGTTCTAAA---TTCTGTGTGTTCGTTCTCGTTTGACCTTGATCACAAGCAGTGGCTAAAGTGCCCTCTCCCCC--------------------GCTCCT--CTAATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCCTCTGAtcactcctttcccttcctccagcAGCTCCCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTTCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATAGGCAGGGCATTCAGAACCTAGAGGT------A-ATTCA--AAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGCAGTC------------------------------CAGGGT--GCTGGGGTTATA-AGAAAGGGAGCACTAGACGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGGTGAGGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTGC--CTTTCAAATCGTAAACCACGGGTCATCAAGGATGGCTGGGAGGAGGTCCCTGGCCTAAACCAAAGGggttcctaacctcaagtgagaCAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTAGACCAA--ACTGCATTA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTCACTACCCCAAGT--------------------------------------------CGACTGCTGAAGCCCT-----------------------GTCCCCCGCC-----------------------------TCAGGACGCGGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA-----------------------GAGATTCTAAAAACCCAGACTACCTCC---------------------------CACCCACTGTGG---AGGATCAGACTAGCTAAGGAACTGAAAGTTGGGTGTACACCAAACAGATTTAAGGAGCCATACAGAAAGCccgtgtttgtgtgtatgt--------------------------------------------------------gtctagggGGC-------------------------------------------------------------------------------GGTGCA-GGAAAGGGCTCGCC------CGATGGCGTGGAGCCTGCC-TGTCCCCCTCTCCTT-AAATGTGCCTTTCCCTCACTGAAGCCAT----CTCCGTGCAACAGAGATGACAGTGCCCCTCTAAGAACGAACAGTGCCTATTGGGGATTCCGCAAGTCAGGCGCTCTGCATGCAGTTAGCatac----aataggtgctcaataaataggcTGCGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGCGCTCATgtattcattaaatgtttttaa---gcttttttgtGCTAGACAGTGTTCCAGCCATGTGAAATACATCAGTGGGGGGA-GACTAAGACGAAGGCGAGATCAAGGGAGGTTTGGTGGAAGTGGCCACAAGGTTTGCAGAGCAACGTCCTCGAAAACGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACACTGAGCCTGCGCAACGCCTCCGCTTCCGGTCCCCAACCGCGGCGCGTGCGCGCTGGGCTC-CGGCGGTCAGCCCGGCCGGCCTCCGAGCTTACCTCTTGCTGAGCCAGCAGCGCTCTCCGCTCacgctccttctcctcctcccggGCCTGGGCCTCGTCACGCCGCACGCGGGCAACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGATG-CCCCCCTTTTTCTTGTCCCTACTTCGACCACAGATTGGTTCCGAATTAGTTGGTACGGCCC--CCTGGCCTGTAACGACAGGTGATTGGCTGAGACGTCCTTT-TCATAGCGAATGTTAGGCGTTCGGCTCATGGTATCCCCTAGCAACCGCCTCTTATCACAGATCTGAACCAATCATAAGTTGGCCCACCCCT-GATGGTACCAGATGCGGCCGTCGATTG-------------GTCGACATGACCGTCAAGTCTCCTTGCGGAAGGGCGCTCCGCACCGACAAACATGCCCATACATTTGATTGGCTCCTGCCCTGCggtagccctgcccccaccttcaGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGAAAGATCACC-CGAGAGTCAGGGACGT-GGCC-----GCGAGGGGCCTTGGAAATCTCCAGATACCAAAGCTGGAAGGGCGTGGAGTCTTCTCCAGTTCTCCTAG-TTTACAGATGTTGTGACCTAGGCTTACAATGGGCCTGGGGTCTG---AAAGTGGGACGT-----------GAGCCGCGGGGGTCAAAGAGCCGGTTTGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------CGGCAAAGAGAGGTGGAGGTGTGACAGCCCTCTTCCC-CAGCCCCTTTCCGTGTTCCCCA--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCTCTCTGACGTTTGAGCTCAGAGATGAGGCGTCCGTAGGAATTAGCCCGAGCCACAGTGTACGCCATCAGGATGCTGGAGGAGAAAGGAACGGAAGCCACTCCTGACACGCT---------------------------CTTCGAAGTCAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46839008 2477 + 50890351 ATGG-------CAACACTTCTTAAGTGTCATGCTTTGGTATGGTTCTAAA---TTCTGTGTGTTCATTCTCGTTTGACCTTGATCACAAGCAGTGGCTAAAGTGCCCTCTCCCCCCA------ACTCGATTCATGGCTCCT--CTAATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCCTCTGATCACTCCTTTCCCTTCCTCCAGCAGCTCCCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCGGGCTTTCTTTCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTCATAGGCAGGGCATTCAGAACCTAGAGGT------A-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGCAGTC------------------------------CAGGGT--GCTGGGGTTATA-AGAAAGGGAGCACTAGACGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGGTGAGGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTGC--CTTTCAAATCGTAAACCACGGGTCATCAAGGATGGCTGGGAGGAGGTCCCTGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CCGCCATA---------------------------------------------------------------------AAGGTAGACCAA--ACTGCATTA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTCACTACCCCAAGT--------------------------------------------CGACTGCTGAAGCCCT-----------------------GTCCCCCGCC----------------------------TTCAGGACGCGGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCCAGACTACCTCC---------------------------CACCCACTGTGG---AGGATCAGACTAGCTAAGGAACTGAAAGTTGGGTGTACACCAGACAGATTTAAGGAGCCATACAGAAAGCCCGCGTTTGTGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGTGCA-GGAAAGGGCTCGCC------CGATGGCGTGGAGCCTGGC-TGTCCCCCTCTCCTT-AAATGTGCcttcccctcactgaagccatctcacttcgtgcaacggcgatgacagtgcccctctaagaaggaacagtgcctattggggattccgcaagtcaggcgctctgcatgtagttagcatac----aataggtgctcaataaatagGCTGTGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGCGCtcatgtattcattaaatgtttttaagcttctcttttgtgctagacactgttccagccatgtgaaatacatcagtgggggga-aactaagacgaaggCGAGATCAAGGGAGGTTTCGTGGAAGTGGCCACAAGGTTTGCAGAGCAACGTCCTCGAAAACGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACACTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAAACGCGGCGCGTGCGCGCTGGGCTC-CGGCGGTCCGCCCGGCTGGCCTCTGAGCTTACCTCTTGCTGAGCCAGCAGCACCCTCCGCTCACGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCGCTTTGCACTTCCGATTGGCGAGGGGATG-CCCCCC-TCCTGTTGTCCCTACTTCGAccacagattggttccgaattagttggtacggccc--cctggcctgtaacgacaggtgattggctgagacgtccttt-tcacagcGAATGTTAGGCGTTCGGCTCGTGGTATCCCCTAGCAACCGCCTCTTATTACAGATCTGAACCAATCATAAGTTGGCCCGCCCCT-GATGCTACCAGATGCGGCCGTCGATTG-------------GTCGACATGACCGTCAAGTCTCCTTGCGGAAGTGCGCTCCGCACCGACAAACATGCCCATACATTTGATTGGCTCCTGCCCTGCGGTAGCCCTGCCCCCACCTTCAGGACACAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGAAAGATCACC-CGAGAGTCAGGGACGT-GGCG-----GCGAGGGGCCCTGGAaatctccagataccaaagctggaagggcgtggagtcttctccagttctcctag-tttacagatgttgtgacctaggcttaCAATGGGCCTGGGGTATG---AAAGTGGGACGT-----------GAGCTGCGGGGGTCAAAGAGCCGGTTTGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------GGGCAAAGAGAGGTGGAGGTGTGACAGCCCTCTTCCC-CAGCCCCTTTCCGTGTTCCCCA--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCTCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccCGAGCCACAGTGTACGCCATCAGGATGCTGGAGGAGACAGGAACGGAAGCCACTCCTGACACGCT---------------------------CTTCGAAGTCAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45412046 2430 + 49145316 ATGGCAACAGCCACCACTTC-TGAGTG---TGCTTTGGTATGGTTCTAAA---TTCTGAGTGTTCACTCTTGTTTAGCCTTAGTCACAACCAATGGCTAAAGTGTCC-CTCCCCCCA------GCTCCATTCATG---TCT--CTGATGAA-------GTAGATAAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTGCTCTTTATTGCCTCTGATCAGGCCTTTCCCCTCCTCCAGCAGCTCTCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCACCTCTGCTGCCTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTCCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTACAGGCAAGACATTAAAAACCTAAAGGT------A-ATTCAAGAACTTTT-----------AAGTCTGGTG------CGCACCACAGGAAACAGCAGTC------------------------------CAGGGT--GCTGGGTTTGTA-AGAAAGGG--------------------GGCACCTGTCCT---AGC-AGGGGTGAGGGTAGG---------------CAGATAAGGCAACAC------CTGGGTTTTGTAAACTGC--CTTTCAAATAGTAAACCACA---CATCAAGGATGGCTGGGAGGAGGTCCCTGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CAGCTATA---------------------------------------------------------------------AAGGTAGAACAA--ACTGCATTA-GGTCAGATGATCTGGATTCCAGGCATGGCTCCAAGTCATTACCCCAAGT--------------------------------------------CCATTGATGAAGCCCT-----------------------GTCTCCCACC----------------------------TTCAGGAC---------------------------------------------------AAAGCTCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCCAGACTACCTCC---------------------------CTCCCAGTGTGG---AGGATCAGACTGGCTAAGGAACTGAAAGTTAGGTGTACACCAAACAGATTTAAGGAGCTATACATAAAGCCCATGTTTGTGTGTGTGT--------------------------------------------------------CT---GGGGGT-------------------------------------------------------------------------------GGTGCAGGGAAAGGGCTCGCC------CAAGGGGGTGGAGact---------tcccctccct--------------------tgacgccatctcacttcgtgccacggagatgacaatgcctctttaagaaagaacggtgcttaagggggattctggaagtcaggcgttctgcatgcagttagcatac----agtaactgctcaataaatagACTGTGCAAGCCAACTAGAAAGTGATCCGAATTTCCTCAAACTGTCCAAGGAATCCTGAATTCGGTAAACA--TTTATGCTTCTCTTTTGTGCTAGACACTGCTCTAGCCATGTGAAATACATCAGTGGGGGGA-AAC-AAGACGAGGGGGCGATCAAGGGAGATTTCATGCAAGTGGGCACAACGTTTGCCGAGCAACGTT-TCGGAAAAGAG-------------GTCCGCGCCGGGTCACGAATTACATACGGGGCACACGGCGCCTGCGCAACGCGTCCACTTCCGGCCCCCTACCATGGCGCCTGCGCGCTGGGCCC-CGGAGTTCCGCCCGGCCGGTTCCCAGGCTTACCTCCTGCTGAGCCAGCAGCACCCTCCGCTCACGCTCCTTCTCTTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACGCGGGCAACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCAGTCCACGGACTGGCACGCCCGCCTCTCTGCACTTCCGATTGGCGAGAGAATG--CCCCCTCCCTCTTGTCCCTACTTCGACCACAGATTGGTTCTTAACTCATTGGTACGGCCC--CCTGGCCTGTAACGACAGGTGATTGGCTAAGACGCCCTTTATCTCAGCGAATGCCAGGCTTTTGGCGCGTGGTATCCCCTAGCAACCG---CTTTTCACATATCCGAGCCAATCGCAAGTTGGCCCTCCCCT-AATG---CCAGATTCGGCCGCCTATTG-------------GCCAACACAACCATCAAGTCTCCTTGCGGAAGAGCACTTCGAACGGCCACACATTCCCATGCATTTGATTGGCTCCCGCCCTGATGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGTCACCTCGGCTG-TGTTTATTCATAGAAGAAAGATCACC-CGAGAGTCTGGGACGT-GGCG-----GCGAGGGTCTCTGGAAATCTCCAGATCCTAGAGCTGGAAGAGCGTGGGGTCTTCTCTAGTTCTCCTAGTTTTACAGA---TGTGACCTAGGCTTACAATTGGCCTGGAGTCTG---AAGGTGGGACAT-----------GGGCTGCAGGGGTCAAAAAGCCGGGTGGGTGGAGCTCAGCGCCACAGCGCGCCGTGCGAGGAAGACTTTGTTCTGCGCCTCCTG------------AGGCAAAGAGAGGTGGAGGTCAGACAGCCCTCTCCCC-CAATGCCTTTCAATGTCCCCCACGGGGTCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCTCTCtgacgtttgagctgagagatgagacgaccgtaggagttagccagAGCCACAGTGTACGCCATCAGGATGCTGGAGGAGACACGAACAGAAGCCACTCCTGACACGCTCCTCCATTCTATACAAACGCCTGGCTCCTTCAAAGCCAG- i calJac3.chr22 C 0 C 0 s mm10.chr7 3663549 2703 + 145441459 ACAGCAGTAACCAAC---TTACAGGTAATATCTCTCAGTCATATTCTAAAAATTTTAGAGTGCTTATCACCATATCCTAACAGTCACAGCCAGT-----------CCCCACCCCC-----------------ATGATTCCA--CCAAAAAA------------TGAGGC---CAACTTACCTTTTCCCGTCGCTTCTCTTCCTCATGCTCTTTATTGCCTCTGGGAACTCCTTTCCTTTCTTCCAGCAGCTCCCTAAACAGGTCCACAGGGCCAGAACTTGGAGCTCCTGGGTCTGCTGCTTCCAGCTCAGGCACTGAGTTTCGTTGCCTGGCTTTCTTCCGTAGGAATTCCGTACGGGCCTATGA---AG--GGTTATAGGGAAGACATTCAGAACCCAGAAGTGCTGAGG-ATACAAGAAT-GGTCCATGGGCAGGGAgggcagtggtagcacacacctttgaacctagcattcaggagacagaggcacatggatctctgaattcaaggccagcatggtctacagagtgagttagttccaggactacacagaaaaatcctgtcttgaaaagaGGGGGTGGGGGTGGGGCAAATATTGAGAGCAAGAAGAGATACCATTTCTAACTTGGAGTGGAGAATCGATGTTTTTAGACAGTAAAC--TGGGCTATCAGAGATAGTTCAGAGAAGATCCCTGACCTAAAACAGAAGGCTTCCCAGTCTCAAGTGATGCAAGGAAAACCCACTCAGGTATAGGTATAGGTGGCTTGTTCAGCCATAGAGCCCCTGCCTTGTGTGTAGTTCCAAATTCAGTCCCCAACACAAGTATGTATATACTCCCAAACTTGTAAGGTAATCAAA-TATTGCTTTCTGGACAAAGGATCTAAATCCAAGGTATGGCTCCAGGTCACCACTCCAAGTACAACCTGACCCCAGATAGGGATGGTCTCTGATTCACAATTCTCCCCTTTCTGCAGCCTTAGTATCTGGGATTAATTACAAGCGTCACCTttttgtttgtttgttttgttttgttttgttttttaagacagggtttttctgtgtagccctggctgtcctggaactcactttgtagaccaggctggcctcagaaatccacctgcctctgcctcccaggtgctgggat--caaaggcgtgcgccaccgccactacccggctTTTTTTTTTTTTTTTAAGCCCACACTAATTCATGATCAGATTGGCCAAGGGACTTAA------GTGTAAACCAAACTAATCGAGTA------ACTTAGAGTCTgtg---atgtgtgtgtggtcttcaatactagcgttcaagtggaacaggcaagctgagttcaagaccagcctggtctacgtagccagttccataacagccacggctacacagaccctgttccaaataaaacCTCCAGATGCTCTTTTCTTGGCAAGCAATGAGGGAGGG-AGAAAAGACATGCC------CAACGAAGTGGACCCCGGCTTGTCCGCCCTTTGCC------------CTCCTTGCTGAAGCCGTTGTACTCAGAGCAA----GGTGACCGCACCCCTCCAAG------TTGTTCTAAGAGGGAATTTCTCAAAGCAAGCGCTCAGAAGGAAGGGAGCATACACAGAGTGGGTGATCAGTAATTAACTTGTGCGGGCAACCTATAAAGTAATCAGAAT-------ATTTGTCCAA------------------------------CTCTTCCAGTATGCTAGTCTCTGGTCCCTCA---------ACACCAGTGGGGAAA--------------------TCTAGGAAGGTTTCTTGGAAGTTAGCACAGGATTTTCAGAGAAACATCGTCGAA--------------------------------------------------CACACAGA--------------CCCGCTCCCGGCAC----------CGAGTGATAGCTAGGCCCGCCGCGCT---TCTGGGCGGTCCCCAGGCTTACCTCTTGCTGGGCGAGCAGCACCCTCCGCTCCCGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCGCGCCGCACGCGGGCAACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTCGGCAAGATATTCATGGCTCCAGTGCCGACCTCGGACTGTCAGGCCCACTCTTCAGCACTTCCGATTGGCTCGAGGATG--CTCCCGCCCCATGGTTCCACCCTTGCTCGTGCATTGGTTCTGGGCCAATTGTCACGTCCCATCCTAGCCT-TGTTTAGAGATTATTGGCTGAGA-GCCTTCCATCTCAGCCAATCCTAAGCATTT------------------GTAACC----------------------------TGAGTTGCTCCACCCCCGGACGCTGCTTGATGAGGCTGTTGCCTGTCTATTCCTTTAAGCAGACATAACC--TAGCTCTTC-------AGGCCGATTTGGACC------------------------TGGCCCCTCCCCA-----AACCCCGTCCGAGGCTTCAGAACG-GGGTTTCAA--AACGCA--AAGCGGCCTTGACTGTTGTTTATTAATAC-----GGTTCAAT-TGAGAGTGTAGCATTCGGGTG-----GCAGAGGGC--GGGGAATTT---GGTTCCAGAGATGAAAGAG------------------TCCCATCA-CTTG-ATATGAAGTCACTGAAGCTGA-----------GGGGCTG---AAGGT------T-----------CAGCCAGACTTATCAGGAAGTTCCATTCCTTGAGCTCAGAGCCACAGCTCGCTGGGCCAGGAAGACTTTATTCTGCACTTCCTG-----------CGGGCAAAAAGGAGCGAAAGTGAAGCACACCTTTT----CATTCTTCTTTCATAGTCTCAT--AGAGCCCTTT--CCGGGGAAATCAGCCTGG-CTCACCGTCTCTATCTGGCGTTTGAGCTCAGAGATGAGGCGTCCGTAACAGTTAGCCAGGGCTACGGTATACATCATCAGGATGCTATGGAAGACAGGAATGAAAATCACTCTAGAAAAACA-----ATCATCTTCAT-CATATGGCTCCTTAGAAACCAgg i mm10.chr7 I 254 I 288 s canFam3.chr1 19622991 2203 - 122678785 GTGCCAATAACCCACACTG--GGAGTGCTGTGTTCCAGTA-----CTGAG---TTCTCTGTGTCAG--CTCATTTCATCCCCACCCTAC---------------CTCTCTGTTCCCATCAGTCACCCCAGACTTTACCCCTGACTGACAGGGACGGGTGTGGGGGGGGCGCGCAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCATACTCTCTATTGCCTCTGGTCGCCCCTTTCCCTTCCTCCAGCAGCTCCCGAAATAGGTCCACAGGGCCAGAACTGGGGGCTCCCGCCTCTGCTGCTTGGAGCTCAGGTAGCGAGTGCTGGTGCCTGGCTTTCTTCCGTAGGAATTCTGTGCGGGCCTGGGGGAAAGAAAGTTACAGGCAGAGCATTCATTGCCTAGCCAT------GCCTCCAAGAAC-TGT-----------GAGACCGGTG------CCAAGCACAGAGAAT-------------------------------------CCCCGT--GCTGGTGCTGAG----------------GGCTCATCAGAGCATCACCCAGCCT-------GGGGGAGAGGATGGG---------------AGAATGAGGTGACAC------CTGGGTTT-GTACGCTGC--CTTT-----GGTGAACCA-------------------------------------------GAAGGGTTTCCCAACCTCAGCTGGCACAATAAAAA-------------------------------CAGCTAGG---------------------------------------------------------------------AAGGCAGCCCAAAATTTGC-----GAGCAGGCGACCAGAAATACAG-TAAGGCTCCAGATCACTGTCCC---T--------------------------------------------CGACCAC----GTGCA-----------------------ATCTGCTGAC------------------------------------------------------------------------------------CAAA--------------------------------------GTGAGCTT-TAAAAGCCCAGACCACCTCC---------------------------CGGCCAGCGGTG---AGGGCCAGATTCGTTAACAAACTTCAAACTCCGTGCACACTAGA-AGCT---AGAAGTTACTCCGAGAACCCCCG---------------------------------------------------------------------GGGTTGGGGGC-------------------------------------------------------------------------------CGCG-G-GGAGAGGGCTGGCC------CCACAGGGGGA----TGGG-TACGTCCCACTTCTC------------------------------------TGCACAGCGGAG--GGCAGTG-CCCTCTGGGCACGAACAGAGC----------------AGGTCCAGCGCTCTGCTCGGGGCGAGCATAC----AGCAGACGCTC--CAGAGGGGTCGGGCAGGAACACTAAACGTGGGTCTGCGTTTCTTTGAACTGCAC-AGGATTCATTTTTTCAGCA-----------GCCCCTACTCTAAGCCAGGCAC-ACCCCGGCCTCACGCAAAACG--AGTGGCGGAA--ACCAGGGCAAAGGGGAGGCCCAGGTGGG----------GAAGCCTCA----------GGTAGGGCCCGCGCAGGCGAGCCCCTGCGTTTCCAACCGCGCCCAGCTCCTCCAGCCTCACGGGAGGCACTGCGCGTGTGCGCCATC-CCGCTTCCGGCCCCTCCCCCACGCGCCTGCGCGCTCGGCCC-GGGAGTCGCGTCCGACCGCACTCGGGGCTTACCTCCTGCTGAGCGAGCAGCACCCTCCGCTCACGTTCTTTCTCCTCCTCTCGGGCCTGAGCCTCGTCACGCCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAACTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCCGTCCACCGACTG-CAGGCCCACCTCTGAGCACTTTCTATTGGCGAGAGGATG---CCGTTCCCTGTTGTTCCTGCCTCAGCTACGGATTGGCCCTGGGCTGGCTGCCACGCCCC-TCCAAGTCCGTAGCGAGCGCTGATTGGCTGAGATGCC---------------------GAATTCGGGT--TGGTGTAGCCTGGAGACCGCCTCTTCACCAGGTCCTGAGCCAATCAC---TTGTCCCCGCCCT-GAAGCTACGGGACGCGGCCGCTGATTG-------------GCTGGC-------------CTTCTCGAGG--------------CCGATA-------------ATCTGATTGGCC-------------GGC-------------TCAGGATGCAAGTTACAAACAAAGCGCTCTGCAGTCTCAGCGG-CGTTTATTGGTACGAGAAAGGTTAACGCGAGAGTGAGGG-----GGTG-----TC--AGGGCCCCGGAAATCT-------CCGCAGCCGG--GGACTTAGGGTCTTCTCAAGTTCTCT----TTTACAGATGAGGTG---CGGGCTTCCATAGGGTCCGGGGGCAGGATGAAGTGGGCCATGGTCCCGAGCAGGGCTAGGGAGGTCGAAGAGCCCCGGTGGCCGAGCTCAGTGCCACAGCGCGCTGTGCCAGGAAGACCTTATTCTGCGCCTCCTGGGTAGAGGTAAAGGGTAAAGAGAAGTGCAGGTGAGGCCGACCGCTCCCCACCATTTCTTTCAACATCC------AGGACCCCCTACCATGA---ACCCGCTTTGCCTCACCGTCTCTATCTGGCGTTTGAGCTCAGAGACCAGACGTCCATAGGAGTTAGCCAAGGCCAGGGTATATGCCATCAGGATGCTATAGG-GACGGAAATGGAAGCCATACCCAGGGGGCTCTTAGCATATCTTCAGTGTAAAGGCTCCTTAGAAACCGGG i canFam3.chr1 C 0 C 0 a score=84819.000000 s hg38.chr19_GL949747v2_alt 135474 36 + 729520 gatgtggacgcctaagcccctcctcgtctgggctca s panTro4.chr19 59069540 36 + 63644993 gatgtggacgcctaagcccctcctcgtctgggctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55946242 36 + 60714840 gatgtggacccctaagcccctcctcgtctgggctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102712274 36 - 106955855 gatgtggacccctaagcccctcctcgtctaggctca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59999478 36 + 64156825 GATGTGgacccctaagtccctcctcgtccaggctca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55024120 36 + 59248254 GATGTGgacccctaagtccctcctcgtccaggctca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47130352 36 + 51301725 GATATGGACCCCCAAGCCCCTCCTCGTCCAGGCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46841485 36 + 50890351 GATGTGgacccctaagcccctcctcgtccaggctca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45414476 13 + 49145316 GATG-------------------TCATCTA----CA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19625194 28 - 122678785 GATCTGGACTCCC-AGCCCCACCCCACCC------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3666252 288 + 145441459 I a score=2513756.000000 s hg38.chr19_GL949747v2_alt 135510 672 + 729520 aggagttcagtctcc-cagcccctccgcct---tcagatccaggagtcctacgtcccgcccacctcctccttcggacccagcagtcc--aggagcctag--gcctcctccctcagactcagtacgtt-------------gcctgctc--------------------ccacgcccaagcctct-----------------------cctctcttggacgcaggTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGGCCGTCTCACCTGGAGATCAGCAGAAGGGGCACAGCAAAAGCCTGGGTCCCCAGGAAGAAGAGGAAATTCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACAAAGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGCTCACATAGTGCCAGGAGTCTGAACACTGAATGgggagagagggaggga-------------gag-aggcgggagCCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGGACCAAGGGGAAAAAGAAATTCGCCGCGGAGGCCCGGAAGGTGCGGGCAGCCGGGGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGG-AAGGCACGGAGAAAAGGGCTCTGAAACA-CAAGAGTCTGTGCCT---CCAttttttttttttttt s panTro4.chr19 59069576 672 + 63644993 aggagttcagtctcc-cagcccctccgcct---tcagatccaggagtcctacgccccgcccacctcctccttcggacccagcagtcc--aggagcctag--gcctcctccctcagactcagtacgtt-------------gcctgctc--------------------ccacgcccaagcctct-----------------------cctctcttggacgcaggTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGGCCACCTCACCTGGAGATCAGCAGAAGGGGCACAGCAAAAGCCTGGGTCCCCAGGAAGAAGAGGAAGTTCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACACAGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGCTCACATAGTGCCAGGAGTCTGAACACTGAATGGGGAGAGAGGGAGGGA-------------GAG-AGGCGGGAGCCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGGACCAAGGGGAAAAAGAAATTCGCCGCGGAGGCCCGGAAGGTGCGGGCAGCCGGGGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGG-AAGGCACGGAGAAAAGGGATCTGAAACA-CAAGAGTCTGTGCCT---CCtttttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55946278 673 + 60714840 aggagttcagtctcc-cagcccctccgcct---tcagatccaggagtcctaagtcccgcccacctcctccttcggacccagcagtcc--aggagcctag--gcctcctccctcagactcagtacgtt-------------gcctgctc--------------------ccacgcccaagcctct-----------------------cctctcttggacgcaggTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGGCCACCTCACCTGGAGATCAGCAGAAGGGGCACAGCAAAAGCCTGGGTCCCCAGGAAGAAGAGGAAGTTCTGGGTGGTCTCAGGGAGCCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGGCTGTCCCCGGAATGGACCACACAGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGCTCACATAGAGCCAGGAGTCTGAACACTGAATGCGGGGAGAGGGACGGA-------------GAG-AGGCGGGAGCCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGGACCAAGGGGAAAAAGAAATTCGCCGTGGAGGCCCGGAAGGTGCGGGCAGCCGGGGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGG-AAGGCACGGAGAAAGGGGATCTGAAACACCAAGAGTCTGTGCCT---CCtttttttttttttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102712310 668 - 106955855 aggagttcagtctcc-cagcccctccgcct---tcagatccagcagtcataagtcccgcgcacctcctccttcggacccagcagtcc--aggagcctag--gcctcctctctcagactcagTATGTT-------------GCCTGCTC--------------------CCACGCCCAAGCCTCT-----------------------CCTCTCTTGGACGCAGGTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGGCCACCTCACCTGGAGATCAGCAGAAGGGGCACAGCAAAAGCCTGGGTCCCCAGGAAGAAAAGGAAGTTCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACACAGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTAGGCTCACGTAGAGCCAGGAGTCTGAACACTGAATGGGGGGAGGGGGAGGGA-------------GAG-AGGCGGGAACCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACACTGGAGATGGCCAGACCCAGGAGAAGGACCAAGGGGAAAAAGAAATTCGCCGTGGAGGCCCGGAAGGTGCGGGCAGCCGGGGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGG-AAGGCACGGAGAAAGGGGATCTGAAAAA-CAAGAGTCTGTGCC-------ttttttttttttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59999514 667 + 64156825 aggagttcagtctcc-cagcacctccgcgt---tcagatccaggagtcctaagtcccgcccacctcctccttcggacccagcagtcc--aggagcctag--gcctcctccctcagactcagtacatt-------------gcctgctc--------------------ccacccccaagccttt-----------------------cctctcttggacgcaggTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGCCCACCTCACCTGGAGATCAGCAGAAGGGGCGCAGCAAAAGCCTGGGTCCCCAGGAAGAAGAGGAAGTTCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCACATGGACGACTGCCCCCGGAATGGACCACACGGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGTTCAAGTAGAGCCAGGAGTCTGAACACTGAATGGGGGGAGAGGGAGGGA-------------GAG-AGGCGGGAACCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGAACCAAGGGGAAAAAGAAATTCGCCGTGGAGGCCCGGAAGGTGCGGGCAGCCGGAGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGGTAAGGCACGGAGAAAGGGGATCTGAAACA-CAAGAGTCTGTGCC-------TTTTTTTTTTTTT-- i rheMac3.chr19 C 0 M 1177 s macFas5.chr19 55024156 663 + 59248254 aggagttcagtctcc-cagcacctccgcgt---tcagatccaggagtcctaagtcccgcccacctcctccttcggacccagcagtcc--aggagcctag--gcctcctccctcagactcagTACATT-------------GCCTGCTC--------------------CCACCCCCAAGCCTTT-----------------------CCTCTCTTGGACGCAGGTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGCCCACCTCACCTGGAGATCAGCAGAAGGGGCGCAGCAAAAGCCTGGGTCCCCAGGAAGAAGAGGAAGTTCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACACGGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGTTCAAGTAGAGCCAGGAGTCTGAACACTGAATGGGGGGAGAGGGAGGGA-------------GAG-AGGCGGGAACCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGAACCAAGGGGAAAAAGAAATTCGCCGTGGAGGCCCGGAAGGTGCGGGCAGCCGGAGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGGTAAGGCACGGAGAAAGGGGATCTGAAACA-CAAGAATCTGTGCC-------tcttttttt------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47130388 666 + 51301725 AGGAGTTCAGTCTCC-CAGCACCTCCGCCT---TCAGATCCAGGAGTCC-AAGTCCCGCCCACCTCCTCCTTCGGACCCAGCAGTCC--AGGAGCCTag--gcctcctccctcagactcagTACATT-------------GCCTGCTC--------------------CCACCCCCAAGCCTTT-----------------------CCTCTCTTGGACGCAGGTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGCCCACCTCACCTGGAGATCAGCAGAAGGGGCGCAGCAAAAGCCTGGGTccccaggaagaagaggaagttCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACACGGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGCTCAAGTAGAGCCAGGAGTCTGAACACTGAatggggggagagggaggga-------------gag-aggcaggaacCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGAACCAAGGGGAAAAAGAAATTCGCCGTGGAGGCCCGGAAGGTGCGGGCAGCCGGAGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGGTAAGGCACGGAGAAAGGGGATCTGAAACG-CAAGAGTCtgtgcc-------ttttttgtttgtt-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46841521 665 + 50890351 aggagttcagtctcc-cagcacctccgcct---tcagatccaggagtcctaaatcccgcccacctcctccttcggacccagcagtcc--aggagcctag--gcctcctccctcagactcagTACATT-------------GCCTGCTC--------------------CCACCCCCAAGCCTTT-----------------------CCTCTCTTGGACGCAGGTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGCCCACCTCACCTTGAGATCAGCAGAAGGGGCGCAGCAAACGCCTGGGTCCCCAGGAAGAAGAGGAAGTTCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCGGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACACGGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGCTCACGTAGAGCCAGGAGTC--AACACTGAATGGGGGGAGAGGGAGGGA-------------GAG-AGGCGGGAACCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGAACCAAGGGGAAAAAGAAATTCGCCGTGGAGGCCCGGAAGGTGCGGGCAGCCGGAGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGGTAAGGCACGGAGAAAGGGGATCTGAAACA-CAAGAGTCTGTGCC-------tttcttttttttt-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45414489 611 + 49145316 AGGACTTCAGTCTCC-CAGC-------------------CCAGGAGTCCTAAGTCCCACCCTCCTCCTCCTCC-----------TCCTTTGGACCCTAG--GCCTCCTCCCAC------------------------------------------------------------CCCGAGCCTCT-----------------------CCTCTCTCCGACGCAGGTG----GT---GGCCC----------------CCAGATCACGTGCATTCAAACCCAGACCCAGAAGTCTGGGCAAACTCACCTGGAAATCAGCAGAAGGGGTACAGCAAAAGCCTGAGTCCCCAGGAAGAAGAGGAAGTTCTGGGCGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACATAGCTTAGAAGGTGGGATCCTG-AAGTCAAGATAGGCTGGGCTCACGTAGAGCCAGGAGTCTGAACGCTGAACGCAGGGAGAGGGAGGGA-------------AAG-AGGCAGGAGCCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGAGGAACGCTGGAGATGGCCAGACCCAGGAGGAGGACCAGGGGGAAAAAGAAATTCGCTGTGGAGGCCCGGAACGTGCGGGCGGCCGGAGAGCAGGTGAAGAAGAGGGTGAGCTGGCAGGGG-AAGGCACAGAGGAAGGGGATCTGAAA---CAACGGTCTGTGCC-------TCCTGCtttttt--- i calJac3.chr22 C 0 C 0 s mm10.chr7 3666540 708 + 145441459 AGAGGTTCAGGCTCCATACCTCCTCCCCCTTCATCAAATCGATAAATCCACACCCTAGCCCTCCT--TTCCTCAGA-CCAGGAATCC--A--AACCCAG--ATGTCTTTTCTTAGACCCTAAGCATTCACACTCCGACTCTCCTGCTCTTGATTTATAGGCATCCCGGCCAGCCCCACGTCTCTGTTGTATATAGGCACCCAGCCCACCTCTCTAGCACTCAGGTGCCCAGA---AACTCCTTTCTCTTTCAAACACTAAATTACACACATTCAAAGTCTGACT---------------GCTCACCTAGAGAGGATCAGAAGAGGTACAGTAAAAGCTTGGGTTCCCAGAAAGTAGAGAAAATTCTGGGCAGTCTGAGGGAGGCTCTCAATGGCCTCAGGGATCTGGGCCCAAATGGACAGCTTCCCGCGGAACGGGCCACACAGTTTCGAAGGTGGGATCCTGTAGGGGGAGACACACTGGATTCA------GTCA--AGTC-----------------GAGCTAGAGTGA-------------GAACAAACAGAAGTCTCTCGTACTTACAGGAAGATACTGTAAAGCACGGGAACTGCAGAGATCGCCAGACCCACAAGGAGAACCAGGGGGAAAAAGAAGTTTGCCGTGGATGCTCGGAAGGTGCGGGAAGCCGGTGAGTAGATGGAGAAGAGGGTTATCTGGTAGGGA-GAGGCGAGGA-AATGGAGGTGTAAGACT-CAAGAGTCAATCCTTT-GCTTTTCCCTGTTTCTT-- i mm10.chr7 I 288 I 1 s canFam3.chr1 19625222 638 - 122678785 ----------CCGCC-AGACCCCTCCTCCC---TCAGACCCGGGAGTCC-AGGCTCCTCCAACCT-------CAGACCCAAGAGTCC--AGGCCCCCAGCCCCCTCCCTCCTCAGACCCAGGA-----------------G-----TC--------------------CTGGCCCCCAACCCCT-----------------------CCTTTCTTAGAAACAGGCA----GTAGGGGCCC----------------CCAGGGAACA------CAAACTCAGACCCAGGATTCTGGGCTCCCTCACCTGGAGATTAAGAGAAGAGGCACAGCAAAAGCCTGGGTCCCCAGGAAAAAGAGAAAGTTCTGGACGGTCTGAGGGAGGTTGGAAATAGACTCAGGGATCTGGGCCCAGATAGACGACTGCCCTTGGAATGGACCACACAGCTTAGAAGGTGGGATCCTG-AAGAAGTCAGAGACAGTGTTCAAGGATGGCCAAGATTCAGAATCCTGGATGAGGGTGGAAGGAAGGAGGGAAGGAGAAGGGAG-AGGCAGGCCCCTGCCACACTTACAGGAAGATGCTGTAAAGCACGGGAACAGCGGAGATGGCCAGAGCCAGGAGAAGGACCAAGGGGAAAAAGAAGTTCGCTGTGGAAGCCCGAAAGGTGCGGGAGGCCGGGGAGCAGGTGGAGAAAAGGGTGAACTGGGGGGAG-AAGG-------------------AGACA-CAAGACCCTGAGCCCTGGCCTGTCCTTTTTCAT--- i canFam3.chr1 C 0 C 0 a score=-567.000000 s hg38.chr19_GL949747v2_alt 136182 9 + 729520 tttttgaga s panTro4.chr19 59070248 5 + 63644993 ttttt---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55946951 5 + 60714840 ttttt---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102712978 5 - 106955855 ttttt---- i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45415100 9 + 49145316 tttttgaga i calJac3.chr22 C 0 C 0 s mm10.chr7 3667249 9 + 145441459 TCTTGGAGC i mm10.chr7 I 1 I 29 s canFam3.chr1 19625860 9 - 122678785 CGTCCAAGA i canFam3.chr1 C 0 I 29 e chlSab2.chr6 46842186 0 + 50890351 C e papAnu2.chr19 47131054 0 + 51301725 C e macFas5.chr19 55024819 0 + 59248254 C e rheMac3.chr19 60000181 1177 + 64156825 M a score=1093.000000 s hg38.chr19_GL949747v2_alt 136191 14 + 729520 cagagtctcgctct s calJac3.chr22 45415109 14 + 49145316 cggagtttcgctct i calJac3.chr22 C 0 I 627 e mm10.chr7 3667258 29 + 145441459 I e canFam3.chr1 19625869 29 - 122678785 I e ponAbe2.chr19 55946956 0 + 60714840 C e nomLeu3.chr10 102712983 0 - 106955855 C e chlSab2.chr6 46842186 0 + 50890351 C e papAnu2.chr19 47131054 0 + 51301725 C e macFas5.chr19 55024819 0 + 59248254 C e rheMac3.chr19 60000181 1177 + 64156825 M e panTro4.chr19 59070253 0 + 63644993 C a score=-415.000000 s hg38.chr19_GL949747v2_alt 136205 11 + 729520 gtcgcccaggc s panTro4.chr19 59070253 2 + 63644993 ---------tt i panTro4.chr19 C 0 C 0 e mm10.chr7 3667258 29 + 145441459 I e canFam3.chr1 19625869 29 - 122678785 I e ponAbe2.chr19 55946956 0 + 60714840 C e calJac3.chr22 45415123 627 + 49145316 I e nomLeu3.chr10 102712983 0 - 106955855 C e chlSab2.chr6 46842186 0 + 50890351 C e papAnu2.chr19 47131054 0 + 51301725 C e macFas5.chr19 55024819 0 + 59248254 C e rheMac3.chr19 60000181 1177 + 64156825 M a score=178978.000000 s hg38.chr19_GL949747v2_alt 136216 94 + 729520 ttttttttttgagac-agagtctcgctc-tgtcgcccaggctggagtgcagtggc---------tctcactgcagcctcc-cctcccgggttcaagctattctcgt s panTro4.chr19 59070255 95 + 63644993 ttttttttttgagacaagagtctagctc-tgtcgcccaggctggagtgcagtggc---------tctcactgcagcctcc-cctcccgggttcaagctattttcgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55946956 86 + 60714840 --------ttgagac-agagtctcgctc-tgtcgcccaggctggggtgcaatggc---------gctcactgcagcctcc-cctcccgggttcaagctattctcgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102712983 86 - 106955855 --------ctgagac-agagtctcgctc-tgtcgcccagactggagtgcggtggc---------gctcactgcagcctcc-cctctcgggttcaagctattctcgt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55024819 87 + 59248254 -----tttttgagac---agtctcgctc-tgtggcccaggcgagagtgcagtggc---------gctcactgcagcctcc-cctcctgggttcaagctattctcgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47131054 87 + 51301725 -----tgtttgagac---agtctggctc-tgtcgcccaggcgggagtgcagtggc---------gctcactgcagcctcc-cctcccgggttcaagctattcttgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46842186 92 + 50890351 ttttttttttgagac---agtctcgctt-tgtcgcccaggcgggagtgcagtggc---------gctcactgcagcctcc-cctcccgggttcaagctattctcgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45415750 103 + 49145316 ttttttttttaaggc---agttttgctcttgttgcccaggctggaatgtaatgccgtgatctcagctcactgcaacctccgcctcccgggttcaagctattctcct i calJac3.chr22 I 627 C 0 e mm10.chr7 3667258 29 + 145441459 I e canFam3.chr1 19625869 29 - 122678785 I e rheMac3.chr19 60000181 1177 + 64156825 M a score=1132733.000000 s hg38.chr19_GL949747v2_alt 136310 402 + 729520 gtctcagcctcccgagtagctgggattacaggtgtgcaccaccactcccggctaatttGTTTTGCTGttgttgttgtttgtttgttttctctttttgagacggagtctcgctctgtcgcccaggctggagtgcagtggcacgatcttggctcacttcgaccttcacctccctggttcaagcaattcccctgcctcagcctcctgagtagctgggattacaggcgcctgccactaagcccggctaa---ttttttttgtatttttagtagagacggggttttgccatgttagccaggctggtctcaaactcctgacctcaggtgatccacccgccttagtctcccgaagtgctgggattacaggcgtgagcc-actgcacccggccTACCTGCCTCTCCTTTTTTCC s panTro4.chr19 59070350 403 + 63644993 gtctcagcctcccgagtagctgggattacaggtgtgcaccaccactcccggctaatttGTTTTGCTGttgttgttgtttgtttgttttctctttttgagacggagtctcgctctgtcgcccaggctggagtgcagtggcacgatcttggctcacttcgaccttcacctccctggttcaagcaattcccctgcctcagcctcctgagtagctgggattacaggcgcctgccactaagcccggctaa--tttttttttgtatttttagtagagacggggttttgccatgttagccaggctggtctcaaactcctgacctcaggtgatccacccgccttagtctcccgaagtgctgggattacaggcgtgagcc-actgcacccggccTACCTGCCTCTCCTTTTTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55947042 402 + 60714840 gtctcagcctcccgagtagctgggattacaggtgtgcaccaccactcctggctaatttGTTTTGCTGttgttgttatttgtttgttttctctttttgagacggagtcttgctctgtcgcccaggctggagtgcagtggcacgatctcggctcactgcgaccttcacctccctggttcaagcaattcccctgcctcagcctcctgagtagctgggattacaggcgcccgccaccaagcccggctaa---ttttttttgtatttttagtagagacggggttttgccatgttagccaggctggtctcaaactcctgacctcaggcgatccacccgccttagtctcccaaagtgctgggattacaggcgtgagcc-accgcacccggccTACCTGCCTCTCCTTTTTTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102713069 401 - 106955855 gtctcagcctccc-agtagctggggttacaggtgggcaccaccactcccggctaatttGTTTTGCTGttgttgttgtttgtttgttttctctttttgagacggagtctcgctctgtcgcccaggctggagtgcagtggcacgatctcggctcactgcgaccttcacctccctggttcaagcaattcccctgcctcagcctctcgagtagctgggattacaggcgcccgccaccaagcccggctaa---tttgttttgtatttttagtagagacggggttttgccatgttggccgggctggtctcaaactcctgacctcaggtaatccacccgcgtcagtctcccgaagtgctgagattacaggcgtgagcc-accgcgcccggccTACCTGCCTCTCCTTTTTAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60001375 393 + 64156825 gtctcagcctcccaagtagctgggattacaggtgtgcaccaccactcccggctaatttGTTTCGC---TG-------ttgtttgttttctgtttttgagacggagcctcgctctgtcgcccaggccggagtgtagtggcgcgatctaggctcactgcgaccttcacctccctggttcaagcaattcccctgcctcagcctcccaagtagctgggattacaggcgctcgccaccaagcccggctaa--attttttttgtatttttagtagagacggggttttgccatgttagccaggctggtctcaaactcctgacctcaggtgatcaacccgcctgagtctcccaaagtactgggattacaggcgtgagcc-gccgcgcccggccTACCCGCCTCTCCTTTTTCCC i rheMac3.chr19 M 1177 C 0 s macFas5.chr19 55024906 379 + 59248254 gtctcagcctcccaagtagctgggattacaggtgtgcaccaccactcccggctaatttgtttcg------------------------ctgtttttgagacggagcctcgctctgtcgcccaggccggagtgtagtggcgcgatctaggctcactgcgaccttcacctccctggttcaagcaattcccctgcctcagcctcccaagtagctgggattacaggcgctcgccaccaagcccggctaa--attttttttgtatttttagtagagacggggttttgccatgttagtcaggctggtctcaaactcctgacctcaggtgatcaacccgcctgagtctcccaaagtactgggattacaggcgtgagcc-gccgcgcccggccTACCCGCCTCTCCTTTTTCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47131141 396 + 51301725 gtctcagcctcccaagtagctgggattacaggtgtgcaccaccactcccggctaatttgtttcgctgttg-------ttgtttgttttctgtttttgagacggagcctcgctctgtcgcccaggccagagtgcagtggcgcgatctaggctcactgcgaccttcacctccctggttcaagcaattcccctgcctcagcttcccaagtagctgggattacaggcgctcgccaccaagcccggctaa--attttttttgtatttttagtagagacggggttttgccatgttagccaggctgatctcaaactcctgacctcaggtggtcaacccgcctcagtctcccaaagtactgggattacaggcgtgagcc-accgcgcccggcctacccgCCTCTCCTTTTTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46842278 393 + 50890351 gtctcagcctcccgagtagctgggattgcaggtgtgcaccaccactcccggctaatttGTTTCAC---TG-------ttgtttgttttctgtttttgagacggagcctcgctctgtcgcccaggccggagtgcagtggcgcgatctaggctcactgcgaccttcacctccctggttcaagcaattcccctgcctcagcctcccaagtagctgggattacaggcgctcgccaccaagcccggctaa--attttttttgtatttttagtagagacggggttttgccatgttagccaggctggtctcaaactcctgacctcaggtgatcaacccgcctcagtctcccaaagtactgggattacaggcgtgagcc-accgcacccggccTACCCGCCTCTCCTTTTTCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45415853 382 + 49145316 gcctcagcctcccaagtggctgggactgcaaacatgcaccacctcacctggctaattt----------tg------------tgtttt-tgtttttgagacagagtctcgctctgtcgcccaggctggagtgcagtggtatgatctcgggtcaccgcaacctccaccttccagtttcaagcagtt-ccctgcctcagcctccagagtagctgggattacaggcacaggccactacacctggtttttgtttgtttttttagttttagcagggacagggtttcaccattttggccagactggtcttgaactcctgacctcaggtgatgcacccgcctcagcctcccaaagtgcagggattgcaggcatgagttaacctcgcccggccTACCTGCCTCTCCTTTTTCCC i calJac3.chr22 C 0 C 0 e mm10.chr7 3667258 29 + 145441459 I e canFam3.chr1 19625869 29 - 122678785 I a score=289308.000000 s hg38.chr19_GL949747v2_alt 136712 94 + 729520 GAACCAGGAGTCTGAGCCCCTTCCTCATCTAGGACCCCGGAGTCTGAGTCCCCAGATCCTC-AGACATATAAGTCAGAATGCCCTAGACCCCTC---C s panTro4.chr19 59070753 90 + 63644993 GAACCAGGAGTCTGAGCCCCTTCCTCATCTAGGACCCCGGAGTCTGAGTCCCCAGATCCTC-AGACATATAAGTCAGAATGCCCTAGACTc------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55947444 94 + 60714840 GAACCAGGAGTCTGAGCCCCTTGCTCATCTAGGACCCCGGAGTCTGAGTCCCCAGATCCTC-AGACATATAAGTCAGAATGccctagacccctc---c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102713470 97 - 106955855 AAACCAGGAGTCTGAGCCCCTTCCTCATCTAGGACCCCGGAGTCTGAGTCCCCAGATcctc-agacatgtaagtcagaatgccctagacccctccttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60001768 97 + 64156825 GAACCAGGAGTCTGAGCCCCTTCCTCATCTAGGACCccagagtctaagtccccggatcctc-agacatagaagtcagaatgccctagactccttcttc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55025285 97 + 59248254 GAACCAGGAGTCTGAGCCCCTTCCTCATCTAGGACCCCAGAGTCTAAGTCCCCGGATCCTC-AGACATAGAAGTCAGAATGCCCTAGACTccttcttc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47131537 97 + 51301725 GAACCAGGAGTCTGAGCCCCTTCCTTATCTAGGACCCCAGAGTCTAAGTCCCCGGATCCTC-AGACATAGAAGTCAGAATGCCCTAGACTCCTCCTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46842671 97 + 50890351 GAACCAGGAGTCTGAGCCCCTTCCTCATCTAGGACCCCGGAGTCTAAGTCCCCGGATCCTC-AGACATAGAAGTCAGAATGccctagactcctccttc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45416235 97 + 49145316 AAACCAGGAGTCTGAGCCCTTTCCTCATCTAGGACCCCAAATTCGGAATTCCCGGATCCTC-AGACATATAAGTCAGAATGCCTCAGACCCTTCTTTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19625898 90 - 122678785 GAAACAGAATCCCTGGTTCTTTGCTGCCGTCAGATCTGGGAGGCCGGATCCCCTCTTCCCCTGGACGGAAAAG-----ACGCCCTAATCCCCTCC--- i canFam3.chr1 I 29 C 0 e mm10.chr7 3667258 29 + 145441459 I a score=1600437.000000 s hg38.chr19_GL949747v2_alt 136806 405 + 729520 TCTCAGATGCAGTAG---TCTGTcctccaaccccctcctc----tctcaggaccgagtaatccaggcccccagga---tcttccttgcccttgacccaggagtgcgggccccaatacctcctgcctcagacccaagggt-cccccctaccccttaccttcttcagGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGTAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTCCCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAGGAC------GGGGCGGGGCCGGGCCGGAGTCAGGGGAGTGGCGGCCTGGAGTTTCCCCGCCTCCACCGCCCCGCCC s panTro4.chr19 59070843 404 + 63644993 -ctcagatccagtag---tctgtcctccaaccccctcctc----tctcaggaccgagtaatccaggcccccagga---tcttccttgcccttgacccaggagtgcgggccccaatacctcctgcctcagacccaagggt-cccccctaccccttaccttcttcagGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGTAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAATTCCTGGGTCCCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAGGAC------GGGGCGGGGCCGGGCCGGAGTCAGGGCAGCGGCGGCCTGGAGTTTCCCCGCCTCCACCGCCCCGCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55947538 405 + 60714840 tctcagatccagtag---tctgtcctccaaccccctcctc----tctcaggaccgagtaatcgaggcccccagga---tcttccttgcccttgacccaggagtgcgggccccagtacctcctgcctcagacccaagggt-cccccctgctccttaccttcttcagGTAGAAAAGCAGCACGAACTTGACCGTGTTAAGCAGGGGCAGTAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTCCCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAGGAC------GGGGCAGGGCCGGGCCCGAGTCAGGGGAGCAGCGCCCTGGAGTTTCCCCGCCTCCACCGCCCCGCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102713567 395 - 106955855 tctcagatccaggag---tctgtcctccaaccccctcctc----tctcaggacctagtaatccagcccccctgga---tattccttacccaggacccaggagtgcgggccccaatacctcccgcctcagacccaagGGT--CCCCCTACCCCTTACCTTCTTCAGGTAAAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGTAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTTCCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAggac------ggggcggggccgggcccgagtcaggggagcggcggcctggAGTTT---------CACCGCCCCGCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60001865 412 + 64156825 tctcagatccaggag---tctgtcctccaaccccctcctc----tcttaagacctagtaatccaggaccccgtga---tcttccttgcccaggacccaggagtgcgggccccaatacctcctgcctcagacccaagagtccccccctaccccttaccttcttcagGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGCAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTCCCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAGGAcggggcgggggcggggccgggcccgAGTCAGGGGCGCGGCTATTTGGAGTTTCCCCGCCTCCACCGCCCTGCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55025382 412 + 59248254 tctcagatccaggag---tctgtcctccaaccccctcctc----tcttaagacctagtaatccaggaccccgtga---tcttccttgcccaggacccaggagtgcgggccccaatacctcctgcctcagacccaagagtccccccctaccccttaccttcttcagGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGCAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTCCCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAggacggggcgggggcggggccgggcccgagtcaggggcgcggCTACTTGGAGTTTCCCCGCCTCCACCGCCCTGCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47131634 410 + 51301725 TCTCAGATCCAGGAG---TCTGTCCTCCAACCCCCTCCTC----TCTTAGGACCTAGCAATCCAGGACCCCGTGA---TCTTCCTTGCCCAGGACCCAGGAGTGCGGGCCCCAAtacctcctgcctcagacccaaGAGTcccccccTACCCCTTACCTTCTTCAGGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGCAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGgcacctggaactcctgggtccCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAGgacggggcgggggcggggccgggcccgAGTCAGGGGCGCGGCTACTTG--GTTTCCCCGCCTCCACCGCCCTGCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46842768 411 + 50890351 tctcagatccaggag---tctgtcctccaa-cccctcctc----tcttaggacctagtaatccaggcctccagga---tcttccttgcccaggacccaggagtgcgggccccaatacctcctgcctcagacccaagagtcccctcctaccccttaccttcttcagGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGCAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTCCCCGCCACACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAggacggggcgggggcggggccgggcccgagtcaggggcgcggCTACTTGGAGTTTCCCCGCCTCCACCGCCCTGCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45416332 407 + 49145316 TCTCACATCGAGGAG---TCTGTCCTAcagccccct--tc----tcttacgacctagcagtccaggcccccaaaa---tcttccttgcccgggacccaggagtccaggccccaatacctcctgcctcagacccaagggt-cccccccatcccttaccttcttcagGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGAGGCAGTAAAGGGCAGAAAAAACTCCCCACCCAGACCACAGTCTGCGCGTAGATAAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTCCCCGCCAGACGACCAAGCGCCCCAGGACAGAGACCGCAGAGGAGCCTGAAGGATGGGGC-GGGGCGGGG-CGAGCCTAAGTCAGAGACGCCGTGGCCTGGAGCTCCCCCGCCTTTACCGCCCCACCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3667287 401 + 145441459 TCTCTGAGCCAATAGGACTCTGACTTCCAGCTCCCTCCTCCCATCCTCAGGGCATAGTAATCAGGGCCCTGATAACCGTCCTCCTTTCTCTAG-CCCAGGACTACAGCCTCCAACACCTGTCAGCTCAGACCCTAGGCT--ACTCCTCAGACTCACCTTCTTCAGGCAGAACAGTATGAGGAACTTAGCAGTGTTGATCAAAGGCAGTAAAGGGCAGAAGAAGCTTCCCACCCAGACCACGGTCTGCGCATAGATGAGCCCCAGCACCTCATCTGGCACCTGGAACTCCAGGGTTCCCGACAGACGACCCAGTGCCCCAGGACAGAGGCCACAGAGTATCCTGAAGGGC------AGAGTGGGAC--------AGTCATAG--GCTGCCTTTTG--GCTTTCCTAACTCTACCACCCAGCCC i mm10.chr7 I 29 I 1787 s canFam3.chr1 19625988 361 - 122678785 TCCCACATCCAGGAG---TCTGTCCTCCAG-ACCCTTCTC----TCTCAGGAGCTAGTAGCTGGGGACCCTCGCA---TCCTCCTTCCTCAGGACCCAGGAAT-------------------------------------CCACCACACTCCTCACCTTCTTGAAATAGAAAAGTAACAGGAACTTGGCCGTGTTGAGCAGAGGTAGTAGAGGGCAGAAAAAACTCCCTACCCAGACCACCGTCTGTGCGTAGATGAGCCCGAGCACCTCGTCGGGTACCTGGAACTCCTGGGTTCCTACCACGCGACCCAGGACCCCGGGACAGAGGCCACAGAGCAGCCTGAGGGGC------GGGGCGGGGCCAAGTCAGAGGCAAGCCCGCC-CGCCTTG------CCCCGCCCCTGCCGTCCTGCCC i canFam3.chr1 C 0 C 0 a score=525804.000000 s hg38.chr19_GL949747v2_alt 137211 214 + 729520 GCCAATAGGAAGCATGCGTATTGGTTGGGGGGGGGGGGGCGGGACTTTCAGGACTCCAC------GTGGAGGGGGTGTGTCCAGAGGGCGGGTCCTGAGGACTAGAAGGGAC----CCAGATGTCGCCGCCGT-----CGGGGCCAGAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGCGGG-GAGATCTGCGGACCTAGGGCAAGCAAAGGGAGCAGGCAGAGGCGG s panTro4.chr19 59071247 213 + 63644993 GCCAATAGGAAGCACGCGTACTGG-GGGGGGGGGGGGGGCGGGACTTTCAGGACTCCAC------GTGGAGGGGGTGTGTCCAGAGGGCGGGTCCTGAGGACTAGAAGGGAC----CCAGATGTCGCCGCGGT-----CGGGGCCAGAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGCGGG-GAGATCTGCGGACCCAGGGCAAGCAAAGGGAGCAGGCAGAGGCGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55947943 207 + 60714840 GCCAATAGGAAGCATGCGTATCTG-------AGGGGAGGCGGGACTTCCAAGACTCCAC------GTGGAGGGGGTGTGTCCAGAGGGCGGGTCCTGAGGACTAGAAGGGAC----CCAGGTGTCGCCGCCGT-----CGGGGCCAGAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGCGGG-GAGATCTGCGGACCTAGCGCAAGCAAAGGGAGCAGGCAGAGGCGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102713962 212 - 106955855 GCCAATAGGAAGCATGCGTATCTG-------AGGAGGGGCGGGACTTTCAAGACTCCAC------GTGGAGGGGGTGTGTCCAGAGGGCGGGTCCTGAGGCCTAGACCGGAC----CCAGGTGTCGCCGCGGTAGGGGCGGGGCCCGAGGGAAGTAACCCACTAAAACAAAGGCGGGGAGTGGG-GAGATCAGCGGACCTAGGGCAAGCAAAGGGAGCAGGCAGAGGCGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60002277 200 + 64156825 GCCAATAGGAAGCAAGCGTATCTG-------AGGAGGGGCGGGACTTTCAAGACTCCAC------GTGGAGGGGGTGTGTCCA-------------GAGGACTAGACGGAGC----CCAGGTGTCGCGGCGGTAGGGGCGGGGCCCCAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGGGGGGGAGATCTGCGGACCTAGGGCAAGCAAAGGGAGCCGGCAGAGGCGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55025794 200 + 59248254 GCCAATAGGAAGCAAGCGTATCTG-------AGGAGGGGCGGGACTTTCAAGACTCCAC------GTGGAGGGGGTGTGTCCA-------------GAGAACTAGACGGAGC----CCAGGTGTCGCGGCGGTAGGGGCGGGGCCACAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGTGGGGGAGATCTGCGGACCTAGGGCAAGCAAAGGGAGCCGGCAGAGGCGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47132044 199 + 51301725 GCCAATAGGAAGCAAGCGTATCTg--------gggggggCGGGACTTTCAAGACTCCAC------GTGGAGGGGGTGTGTCCA-------------GAGGACTAGACAGGAC----CCAGGTGTCGCGGCGGTAGGGGCGGGGCCACAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGTGGGGAAGATCTGCGGACCTAGGGCAAGCAAAGGGAGCCGGCAGAGGCGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46843179 199 + 50890351 GCCAATAGGAAGCAAGCGTATCTG-------AGGAGGGGCGGGACTTTCAAT-CTCCAC------GTGGAGAGGGTGTGTCCA-------------GAGGACTAGACGGGAC----CCAGGTGTCGCGGCGGTAGGGGCGGGGCCACAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGTGGGTGAGAACTGCGGACCTAGGGCAAGCAAAGGGAGCCGGCAGAGGCGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45416739 217 + 49145316 ACCAACAGGAAGCACGCGTAACTG-------ACGTGGGCCGGGACTTTCAAGACTCCACGTGGAGGTGGAGGAGGTGGGTCCAGAGGGCGGGTCCTGAGGACTAGACTAGACAGGACCCGGCGT-GCGGCGGTAGGGGCGGGGCCAGAGGGAAGG----CACTAAAACCAGGATGGGAAGCGAG-GCGACCTGCGGACCCAGGGCAAGCAAAGGGAGCCAGCAGAGGCGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19626349 104 - 122678785 GCCAATCAGAAGTGAATATATTTG-------AATAGGGGTGGAGTTTTCAGT------C------CTGGAGGGGGTGTGTCTA---------------------------------------------------------------GAGGGAAGTAACT-----------AGGTGAGAGGGGGC-GGGGCCTGCAGAC-------------------------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3667688 1787 + 145441459 I a score=1106245.000000 s hg38.chr19_GL949747v2_alt 137425 308 + 729520 GAATGGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGAT-G-GGGCACGGCCT-C-GTCCTAGA-GGGGCGGGGCCA-CAGCAAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGACAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATATATCAGAAAGAACTCGGGACCCGGGCACCTGGAGG-CCCACGCGTCCGAGTCTCCACATCGCAAGC---CTATGAGACCCTGTCAATACTTTCTCT-GGGGG------T s panTro4.chr19 59071460 309 + 63644993 GAATGGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGAT-G-GGGCAGGGCCT-TGGTCCTAGA-GGGGCGGGGCCA-CAGCAAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGACAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATATGTCAGAACGACCTCAGGACCCGGGCACCTGGAGG-CCCACGCGTCCGAGTCTCCACATCGCAAGC---CTATGAGACCCTGTCAATACTTTCTCT-GGGGA------T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55948150 308 + 60714840 GAATAGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGAT-G-GGGCAGGGCCT-G-GTCCTAGA-GGGGCGGGGCCA-CAGCAAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGACAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATATGTCAGAAAGACCTCAGGACCCGGGCACCTGGAGG-CCCACGCGTCCGAGTCTCCACATCACAAGC---CTATGAGACCCTGTCAATACTTTCTCT-GGGGG------T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102714174 306 - 106955855 GAATAGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGAT-G-GGGCAGGGCCT-G-GTCCTAGA-GGGGCGGGGCCA-CAGCGAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGACAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATAGGTCAGAAAGACCTCAGGACCCGGGCACCTGGAGG-CCCAGGCGTCCGAGTCTCCACATCTCAAGC---CTATGAGACC--GTCAGTACTTTCTCT-GGGGG------T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60002477 309 + 64156825 GAACAGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGAT-G-GGGCAGGGCCT-G-GTCCTAGGGGGGGTGGGGCCA-CAGCGAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGGCAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATAGGTCAGAAAAACCTCAGGACCCGAGCACCTGGAGG-CCCACGCGTCCGAGTCTCCACATCGCAAGC---CTATGAGACCCTGTCAATACTTTCTCT-GGGGG------T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55025994 309 + 59248254 GAACAGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGAT-G-GGGCAGGGCCT-G-GTCCTAGGGGGGGTGGGGCCA-CAGCGAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGGCAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATAGGTCAGAAAGACCTCAGGACCCGAGCACCTGGAGG-CCCACGCGTCCGAGTCTCCACATCGCAAGC---CTATGAGACCCTGTCAATACTTTCTCT-GGGGG------T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47132243 291 + 51301725 GAACAGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGat-g-gggcagggcctgg-gtccTAGG--------------------GGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGGCAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCactgaagaaggaagaaataggTCAGAAAGACCTCAGGACCCGAGCACCTGGAGG-CCCACGCGTCCGAGTCTCCACATCGCAAGC---CTATGAGACCCTGTCAATACTTTCTCT-GGGGG------T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46843378 309 + 50890351 GAACAGTAAAAAGGT------GCACGGTGAAAAGAACAGCGCGAT-G-GGGCAGGGCCT-G-GTCCTAGT-GGGGCGGGGCCA-CAGCGAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGGCAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATAGGTCAGAAAGACCTCAGGACCCGAGCACCTGGAGG-CCCACGCGTCCAAGTCTCCACATCGCAAGC---CTATGAGACCCTGTCAATACTTTCTCTGGGGGG------T i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45416956 293 + 49145316 GAATAGCAAAAAGGTGAAATAGCACGGTGAGAAGGACAGCACGAT-GTGGGCAGGGCCT-G-GTCCTGAA--------------------GGGGCGGGGCTCTCACTTTCGAGGAAACTGGATGAGCAGCGAGACTGCCAAGCCAGTCAGCAGATCAAAGAGTAGGAGCTTGTACATTTCCTGGCCCACGAGAGTCTCCCAGCACTGAAGAC-----AAATAGGTCAGAAAGACCTCAGGACCCGGGCACCTGGAGGCCCCACGCGTCGGAGTCTCCACATCCCAAAC---CTGTGAGACCCTATCAATACTTTCTCT-GGGGG------T i calJac3.chr22 C 0 C 0 s mm10.chr7 3669475 313 + 145441459 GAATAGAAGATAGGTGGA---GCACAAT-ATAGGAACAATCCCATCG-GGATGGGGCCT-G-CTCTAATA-GGGGCAGGGCTACCAGGAAGGGCAAGGACACTTACTTCCTAGGAAACTGGACCAACAGCGTGACCAACAGGCCCATCAGCAGATCAAAGAGTACAAGTTTGTACATCTCCTGGCCCAGCCGAGTCTCCCAGCACTGAAGAAGTAAGAAATTGGT-----AGATC---AGACTCTCCTGCCTGGAGA-CCCAAGCATCTGAGGCTCCGAATTGTCAGCAAACATCAGAACCCCACTCGTGAATTGTGT-GGGTGGGCGCTT i mm10.chr7 I 1787 C 0 s canFam3.chr1 19626453 245 - 122678785 -----------------------------AAAAGGTCAAAGAAAT-G-GGGTAGGGGTG-G----------GGG---------------------------CTCACTTCCGAGGAAACTGGATGAGCAGCATGACAGCCACGCCAGTCAGCAGATCAAAGAGCAGGAGTTTGTACATCTCCTGCCCCAGCCGGGTCTCCCAGCACTGAGGAAGGAAGGCATGGGTCAGAAAGACCTCCAGATCCAGGCACCTGGAGG-TCCAAGCATCCAAGTCTCCAAATCACAAGT---------GATCCTAACAAACCTTTTTTT-GGGGG------G i canFam3.chr1 C 0 I 12 a score=79960.000000 s hg38.chr19_GL949747v2_alt 137733 27 + 729520 CCTCGTTTTTCAAACTTTCATACCCTT s panTro4.chr19 59071769 27 + 63644993 CCTCGTTTTTCAAACATTCATACCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55948458 27 + 60714840 CCTCGTTTTTCAAACATTCATACTCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102714480 27 - 106955855 CCTCGTTTTTCAAACATTCATACCCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60002786 27 + 64156825 CCTCGTTTTTCAAACATTCATACCCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55026303 27 + 59248254 CCTCGTTTTTCAAACATTCATACCCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47132534 27 + 51301725 CCTCGTTTTTCAAACATTCATACCCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46843687 27 + 50890351 CCTCGTTTTTCAAACATTCATACCCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45417249 27 + 49145316 CCTCGTTTTTCAAACATCATTATCCTT i calJac3.chr22 C 0 C 0 s mm10.chr7 3669788 23 + 145441459 CACTGTTTATC-AGTATTCATGCC--- i mm10.chr7 C 0 C 0 e canFam3.chr1 19626698 12 - 122678785 I a score=1351824.000000 s hg38.chr19_GL949747v2_alt 137760 426 + 729520 GGGAGAGTGTTCCAGCACCCCAAGCTCCCCTCTCCGCCCAAACCAAGAGTCTGGACCCACCCAGCT---------CCATCTTTCCTTCAGGGACCCAAGAGTCCCACGCACA--CCCATGCCGTTCTCACCGGAAGTTGTTTGTAATTGTAGCCACAGGTTTTGCAGTCCTCAGCCTCGGAGTCGCCCCCACAAGTGATCTGATTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCGAGGCGAAGAAACACGGTCCTGAAGGGGGGAAGGCA---GAGAATGGGCCCTGACCCGGTACCCACCATGTGGCAGTTCCCTTCTCA---------GTGGAACGCGCCCGC-ATTCAAC-------CCATCTCACA---GATGAAGCTGAGGCCC----AGTGACAGAATCAGGA----------------TTTCTTTCTttctttctttctt---tttttttt---tttttttttgagacagggtct s panTro4.chr19 59071796 433 + 63644993 GGGAGAGTGTTCCAGCACCCCAAGCTCCCCTCTCCGCCCAAACCAAGAGTCTGGACCCACCCAGCT---------CCATCTCTCCTTCAGGGACCCAAGAGTCCCAGGCACA--CTCATGCCGTTCTCACCGGAAGTTGTTTGTAATTGTAGCCACAGGTTTTGCAGTCCTCAGCCTCGGAGTCGCCCCCACAAGTGATCTGATTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCGAGGCGAAGAAACACGGTCCTGAAGTGGAGGAGGCAGAGGAGAATGGGCCCTGACCAGGTACCCACCATGTGGCAGTTCCCTTCTCA---------GTAGAACGCGCCCGC-Attcaac-------ccttctcaga--tgaagaagctgaggccc----agtgaCAGAATCAGGA----------------TTTCtttcttttcttttttcttttcttttcttt---tttttttttaagacagggtct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55948485 409 + 60714840 GGGAGAGTGTTCCAGCA-CCCAAGCTCCCCTCTCCGCCCAAACCAAGAGTCTGGACCCACCCAGCT---------CCATCTTTCCTTCAGGGACCCAAGAGTCCCAGGCAGAT-CCCGTGCCGTTCTCACCGGAAGTTCTTTGTAATTGTAGCCACAGGTTTTGCAGTTCTCAGCCTCGGAGTCGCCCCCACAAGTGATCTGATTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCCAGGCGGAGAAACACGGTCCTGAAGGGAAG---------GAGAATGGGCCCTGACCCGGTACCCACCATGTGGcagttcccttctcc---------gtggaacgcgcccgc-attcaac-------ccatctcacagatgaagaagctgaggccc----agtgacag--tcaggA----------------tttctttctttctttctttctt------------------tttttgagacagggtct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102714507 417 - 106955855 GGGAGAGTGTTCCAGCA----------CCCTCTCCGCCCAAACCAAGAGTCTGGACCCACCCAGCT---------CCATCTTTCCTTCAGGGACCCAAGAGTCCTAGGCAGAT-CGCATGCCGTTCTCACCGGAAGTTCTTTGTAATTGTAGCCACAGGTTTTGCAGTCCTCAGCCTCGGAGTCGCCCCCACAAGTGATCTGATTCCAGAGAGAGAAGAGCAGCACCACCAGGGAGGCCAGGCGAAGAAACACGGTCCTGAAGGGGGGAAGGCAGAGGAGAATGGGCCCTGACCCGGTACCCACCATGTGGCAGTTCCCGTCTCA---------GTGGAACGCGCCCGC-ATTCAGc-------ccatctcacagatgaagaagctgaggccc----agtgaCAGAGTCAGGA----------------TTTCtttcttttttttcttttt---------tc---tttttttttgagacagggtct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60002813 420 + 64156825 GGGAGAGTGTTCCAGCATCCCGAGCTCCCCTCTCCGCCCAAACC--GAGTCTGGACCCACCTAGCT---------CCATCTTTCCTTCAGGGACCCAGGAGTCCCAGGCAGAT-CCCATGCCGTTCTCACCGGAAGTTCTTTGTAATTGTAGCCACAGGTTTTGCAGTCCTTAGCCTCGGAGTCGCCCCCACAAGTGATCTGTTTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCCAGGCGAAGAAACACGGTCCTGGCGGGGGGAAGGCA---GAGAATGGGCCCTGATCCGGTACCCACCACGTGGCAGTCCCCTTCTCA---------GTGGAACGCGCTCAC-Attcaac-------ccatctcacagatgaagaagcagaggccc----agcgaCAGAGTCAG-----------------------ttcttttcttttctttt----cttttct---tttctttttgagacagggtct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55026330 433 + 59248254 GGGAGAGTGTTCCAGCATCCCGAGCTCCCCTCTCCGCCCAAACC--GAGTCTGGACCCACCTAGCT---------CCATCTTTCCTTCAGGGACCCAGGAGTCCCAGGCAGAT-CCCATGCCGTTCTCACCGGAAGTTCTCTGTAATTGTAGCCACAGGTTTTGCAGTCCTTAGCCTCGGAGTCGCCCCCACAAGTGATCTGTTTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCCAGGCGAAGAAACACGGTCCTGGCGGGGGGAAGGCA---GAGAATGGGCCCTGATCCGGTACCCACCACGTGGCAGTCCCCTTCTCA---------GTGGAACGCGCTCAC-ATTCAAC-------CCATCTCACAGATGAAGAAGCAGAGGCCC----AGCGACAGAGTCAGGA----------TCtttctttctttcttttcttttctttt----cttttct---tttctttttgagacagggtct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47132561 446 + 51301725 GGGAGAGTGTTCCAGCATCCCGAGCTCCCCTCTCCGCCCAAACC--GAGTCTGGACCCACCTAGCT---------CCATCTTTCCTTCAGGGACCCAGGAGTCCCAGGCAGAT-CCCATGCCGTTCTCACCGGAAGTTCTTTGTAATTGTAGCCACAGGTTTTGCAGTCCTTAGCCTCGGAGTCGCCCCCACAAGTGATCTGTTtccagagagagaagagcaggacCACCAGGGAGGCCAGGCGAAGAAACACGGTCCTGGCGGGGGGAAGGCA---GAGAATGGGCCCTGATCCGGTATCCACCACGTGGCAGTCCCCTTCTCA---------GTGGAACGCGCTTGC-ATTCAAC-------CCATCTCACAGATGAAGAAGCAGAGGCCC----AGCGACAGAgtcaggatttctttctttctctctttttctctctctctttctttt----tctttctttctttctttttgagacagggtct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46843714 436 + 50890351 GGGAGAGTGTTCCAGCATCCTGAGCTCCCCTCTCCGCCCAAACCAAGAGTCTGGACCCACCCAGCT---------CCATCTTTCCTTCAGGGACCCAGGAGTCCCAGGCAGAC-CCCATGCCGTTCTCACCGGAAGTTCTTTGTAATTGTAGCCACAAGTTTTACAGTCCTTAGCCTCGGAGTCGCCCCCACAAGTGATCTGTTTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCCAGGCGAAGAAACACGGTCCTGGCGGGGGGAAGGCA---GAGAATGGGCCCTGATCCGGTACCCACCACGTGGCAGTCCCCTTCTCC---------GTGGAACGCGCTCGC-ATTCAACATTCAAGCCCtctcacagatgaagaagctgaggccc----agcgaCAGAGTCAGGA----------------tttctttctttctttctttctt----tcttttt---tttttttttgagacagggtct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45417276 413 + 49145316 GGGAGAGTGTTCCAGCACCCCAAGCTCCCCCCTCCGCCCAAACCAAAAGTCTGGTCCCACGCAGCT---------CCTTCTTTCCTCTGGGGACCCTAGCGTCCCAGGCAGAC-CCCACGCCGTTCTCACCGGAAGTTCTTTGTAATTGTAGCCACAGGTTTTGCAGTCCTCAGCCTCGGCGTCGCCCCCACAAGTGATCTGATTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCCAGGCGAAGAAACAGGGTCCTGGTGAGGGGAAGGCAGAGGAGAATGGGCCCTGACCC-GTCCCCACCACGTGGTGGTTCCCTTCTGA---------GTGGAACGCGCTCGG-ATTCAAC-------CCAGCTCACAGATGAAGAAGCTGAGGCT------GTGACACAATCAGGA--------------------------tttttctttttt----------c---tttttttttgagacagggtct i calJac3.chr22 C 0 C 0 s mm10.chr7 3669811 345 + 145441459 ------ATGTTT----------AGCTTCTTTCC-------AACCAAGGAACAG--TCCACCCAGTTCAAGGATTCCTATCCTACCTCTAGG--CCCAAGAATGCCACCTGTGTGCCCACAGCATTCTCACCGGAATTTCTTTGTAATTATAGCCGCAGGCCTTGCATCCTTCTGCCTCCATGTTTCCCCCACACGTGATCTGACTCCACAGAGAGACCAGAAGGAACACCAGCGAGGCCAGACGCAAAAACACAGTCCTG-----------------CAAGATGAA---------GGGACTCACACTGAGGTAGTG-CCTCCTGG---------ATG---CACACTCGT-GATCTCC-------TCCTC-CAC--------------------------------------------------------TTTATATTTTTCCTACCCGCcc-------ccca---cttttcacagaggaaggaact i mm10.chr7 C 0 C 0 s canFam3.chr1 19626710 380 - 122678785 GGGAGGGTGTCCTAGCACTTTAAGCTCCTTCTTCCTCTTAAACCTGGTGTCTGAACCCATCTAGTT---------CCTGCTTTCCTTCAAGGACCCAGGA-TTTGGGGC-----CCC------TTCTCACCGGTAGTTCCTTGTAATTGTAGCCACAGGTCTTACACTCTTCAGCCTCAGCCTTGCCCCCACAAGTGATCTGATTCCAGAGGGAGAAGAGCAGGACTAGCAGGGATGCCAGGCGGAGAAACACGGTCCTGGCAAGGGGAA-------CGGAATCAGCCCTGACC-AGTGTTCACCACATGCCAGCCCCCCTCCGCCCCCCACATGTGGAACACGCTCACAattcttc-------ccacttcacaaatgaagaaactgaggctctgaTGGAACAagagtcagga----------------ttt------------------------------------------------------ i canFam3.chr1 I 12 C 0 a score=7317.000000 s hg38.chr19_GL949747v2_alt 138186 6 + 729520 cactct s panTro4.chr19 59072229 6 + 63644993 cactct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55948894 6 + 60714840 cactct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102714924 6 - 106955855 cactct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60003233 5 + 64156825 cact-t i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55026763 5 + 59248254 cact-t i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133007 5 + 51301725 cact-t i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844150 5 + 50890351 cact-t i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45417689 6 + 49145316 caccct i calJac3.chr22 C 0 C 0 s mm10.chr7 3670156 6 + 145441459 gagtct i mm10.chr7 C 0 I 588 e canFam3.chr1 19627090 0 - 122678785 C a score=299754.000000 s hg38.chr19_GL949747v2_alt 138192 107 + 729520 gtcacccggactggagtgcagtggcgcgatctcagctcactgcaacctccacctcccaggctcgagccattctcctgcct------------------------cagcctcccgagtagctgggactacag s panTro4.chr19 59072235 107 + 63644993 gtcgcccggactggagtgcagtggtgcgatctcagctcactgcaacctccacctcccaggctcaagccattctcctgcct------------------------cagcctcccgagtagctgggactacag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55948900 107 + 60714840 gtcgcccagactggagtgcagtggcgcgatctcagcttactgcaacctctacctcccaggctcaagccattctcctgcct------------------------cagcctcccgagtagctgggactacgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102714930 107 - 106955855 gtcgcccggactggagtgcagtggcgcgatctcagctcactgcaacctctaccgcccaggctcaagccattctcctgcct------------------------cagcctgccgagtagctgggactacag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60003238 107 + 64156825 gtcgtacagactggagtgcagtggcgcgatctcagctcactgcaccctctacctcccaggctcaagcgattctcctgcct------------------------cagcctcccgagtagctgggactacag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55026768 107 + 59248254 gtcgtacagactggagtgcagtggcgcgatctcagctcactgcaccctctacctcccaggctcaagcgattctcctgcct------------------------cagcctcccgagtagctgggactacag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133012 107 + 51301725 gtcgtacagactggagtgcagtggtgtgatctcagctcactgcaccctctacctcccaggctcaagcgattctcctgcct------------------------cagcctcccgagtagctgggactacag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844155 104 + 50890351 ---gtacagactggagtgcagtggcgcgatctcagctcactgcaccctctacctcccaggcttaagcgattctcctgcct------------------------cagcctccccagtagctgggattacag i chlSab2.chr6 C 0 I 58 s calJac3.chr22 45417695 121 + 49145316 atcgcccagactgtagtgcagtggcgtgatctcggctc-------tctccacctcccaggctcaagca---cttctgccttgagaagtaggaggctcctccaagtagcctcccaagtagctgggactactg i calJac3.chr22 C 0 I 4 e mm10.chr7 3670162 588 + 145441459 I e canFam3.chr1 19627090 0 - 122678785 C a score=22232.000000 s hg38.chr19_GL949747v2_alt 138299 9 + 729520 aagccacta s panTro4.chr19 59072342 9 + 63644993 aagccacta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949007 9 + 60714840 aagccacta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715037 9 - 106955855 aagccacta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60003345 9 + 64156825 aagccacta i rheMac3.chr19 C 0 M 128 s macFas5.chr19 55026875 9 + 59248254 aagccacta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133119 9 + 51301725 aagccaCTA i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45417820 9 + 49145316 gggccacta i calJac3.chr22 I 4 C 0 e mm10.chr7 3670162 588 + 145441459 I e canFam3.chr1 19627090 0 - 122678785 C e chlSab2.chr6 46844259 58 + 50890351 I a score=53959.000000 s hg38.chr19_GL949747v2_alt 138308 35 + 729520 ccgccgggctaatattcgtatttttactacagacg s panTro4.chr19 59072351 35 + 63644993 ccgccgggctaatattcgtatttttactacagacg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949016 35 + 60714840 ccgccgggctaatattcgtatttttactacagacg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715046 35 - 106955855 ccgccgggctaatattggtatttttactacagaag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55026884 35 + 59248254 tcgccgggctaacttttgtattttcactagagaca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133128 35 + 51301725 TCGCcgggctaacttttgtatttttactagagaca i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45417829 35 + 49145316 tcgccgggctaatttttgtatttttagtagagatg i calJac3.chr22 C 0 C 0 e mm10.chr7 3670162 588 + 145441459 I e canFam3.chr1 19627090 0 - 122678785 C e chlSab2.chr6 46844259 58 + 50890351 I e rheMac3.chr19 60003354 128 + 64156825 M a score=57765.000000 s hg38.chr19_GL949747v2_alt 138343 31 + 729520 gggtttcatcatgtttgtcaggctggtctcg s panTro4.chr19 59072386 31 + 63644993 gggtttcatcatgtttgtcaggctggtctcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949051 31 + 60714840 gggtttcgccatgtttgtcaggctggtctcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715081 31 - 106955855 gggtttcaccatgttcgtcaggctggtctcg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55026919 31 + 59248254 gggtttcaccgtgtttgtcaggctggtgttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133163 31 + 51301725 gggtttcaccgtgtttgtcaggctggtgttg i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45417864 31 + 49145316 ggctctcatctcgttggccaggctggtctcg i calJac3.chr22 C 0 C 0 s mm10.chr7 3670750 31 + 145441459 ggaactcactttgtagaccaggctggcctcg i mm10.chr7 I 588 C 0 e canFam3.chr1 19627090 0 - 122678785 C e chlSab2.chr6 46844259 58 + 50890351 I e rheMac3.chr19 60003354 128 + 64156825 M a score=26225.000000 s hg38.chr19_GL949747v2_alt 138374 12 + 729520 aactcctga--cct s panTro4.chr19 59072417 12 + 63644993 aactcctga--cct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949082 12 + 60714840 aactcctga--cct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715112 12 - 106955855 aactgctga--cct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55026950 12 + 59248254 aactcctga--cct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133194 12 + 51301725 aactcctga--cct i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45417895 12 + 49145316 aactcctga--cct i calJac3.chr22 C 0 I 12 s mm10.chr7 3670781 14 + 145441459 aactcagaaatcct i mm10.chr7 C 0 I 1 s canFam3.chr1 19627090 12 - 122678785 gaatccaga--tct i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46844259 58 + 50890351 I e rheMac3.chr19 60003354 128 + 64156825 M a score=527561.000000 s hg38.chr19_GL949747v2_alt 138386 198 + 729520 cagcctcggcctcccaaagtgctgggattacaggtgtgagccactgcacctggccAACAGAGTCAGGATTTGAATCCCTGGATTCGGTATCAGCAGGATTTCCGTGTCTTACCTGTCAGCGCCAACATCCCTCTGACCGCCCCCACCCTTCAT---CATTCCCAGCCATCCC--CGTGAGGCTGGAACCTGAGCAGGATAAAA s panTro4.chr19 59072429 198 + 63644993 cagcctcggcctcccaaagtgctgggattacaggtgtgagccactgcacctggccAACAGAGTCAGGATTTGAATCCCTGGATTCGATATCAGCAGGATTTCCGTGTCTTACCTGTCAGCGCCAACATCCCTCTGACCGCCCCCACCCTTCAT---CATTCCCAGCCATCCC--CGTGAGGCTGGAACCTGAGCAGGATAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949094 198 + 60714840 cagcctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcctggccAACAAAGTCAGGATTTGAATCCCTGGATCCGATATCAGCAGGATTTCCGTGTCTTACCTGTCAGTGCCAACATCCCTCTGACCGCCCCCACCCTTCAT---CATTCCCAGCCATGCC--CATGAGGCTGGAACCTGAGCAGGATAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715124 198 - 106955855 cagcctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcctggccAACAGAGTCAGGATTTGAATCCCTGGATCCGATATCAGCAGGATTTCCGTGTCTTACCTGTCAGCGCCAACATCCCTCTGACCGCCCCCACCCTTCAT---CATTCCCAGCCATCCC--CATGAGGCTGGAACCTGAGCAGGATAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60003484 198 + 64156825 cagcctcggcctctcaaagtgctgggattacaggtgtgagccaccacgcctggccAGCGGAGTCAGGATTTGAATCCCTGGATCCGATATCAGCAGGATTTCCGTGTCTTACCTGTCAGCGCCAACATCCCTCTGACCGCCCCGACCCTCCAT---CATTCCCAGCCATCCC--CATGAGGCTGGAACCTGAGCAGGATAAAA i rheMac3.chr19 M 128 C 0 s macFas5.chr19 55026962 198 + 59248254 cagcctcggcctctcaaagtgctgggattacaggtgtgagccaccacgcctggccAGCGGAGTCAGGATTTGAATCCCTGGATCCGATATCAGCAGGATTTCCGTGTCTTACCTGTCAGCGCCAACATCCCTCTGACCGCCCCGACCCTCCAT---CATTCCCAGCCATCCC--CATGAGGCTGGAACCTGAGCAGGATAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133206 198 + 51301725 cagcctcggcctctcaaagtgctgggattacaggtgtgagccaccacgcctggccagcggagtcaggatttgaatcccTGCATCCGATATCAGCAGGATTTCCGTGTCTTACCTGTCAGCGCCAACATCCCTCTGACCGCCCCGACCCTCCAT---CATTCCCAGCCATCCC--CATGAGGCTGGAACCTGAGCAGGATAAAA i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45417919 198 + 49145316 ccatctcggcctcccagagtgctgggattacaggcgtgagccaccgagcccagccA--AGAGTCAGGATTTGAATCCCTGGATCCGATATCCGCAGGATTTTCGTGTCTTACCTGTCAAGGCCAACGTCCCTCTGACCGCCCCCACCCCTCAT---CATTCCCAGCCCTCCCAACATGAGGCTGGAACCTCAGCAAGATTAAA i calJac3.chr22 I 12 M 244 s mm10.chr7 3670796 156 + 145441459 ctgcctctgcctccc-gagtgctgggattaaaggcgtgcgccaccacgcccggct-------------------------------------------CTTCTCTGTCTTATTTGT-AGAACCTTTTTCCACCTGTCCCTTTCCCCCTTCTGTCTGCACTCCCTTCCCATCC--CATGAGTCCAGAACCTAAGCAGGATCAAG i mm10.chr7 I 1 C 0 s canFam3.chr1 19627102 118 - 122678785 ---------------------------------------------------------------------------cactgggtccCATATCCAGGGGATTTCTGTGCCTTGTGTACTAGAGCCAGTGTCTTTCACACCAGCCCTGCC----GT---CATCCCCAG-CACACC--CACAGAGGTAGAACCTGAGCAGGATAAAA i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46844259 58 + 50890351 I a score=446991.000000 s hg38.chr19_GL949747v2_alt 138584 161 + 729520 ACGATCTGGCGACTCCGAGTGTAGCCCTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAGCACAAAATTGACCCCAGCGATGAAGATGGACGGAAGGTAATTCACCCCAAGCTTCAGCAGTGGCAACTCCTGGACAAGGGGCATCTCCTGGGAGCGGGA---- s panTro4.chr19 59072627 161 + 63644993 ACGATCTGGCGACTCCGAGTGTAGCCCTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAGCACAAAATTGACCCCAGCGATGAAGATGGACGGAAGGTAATTCACCCCAAGCTTCAGCAGTGGCAACTCCTGGACAAGGGGCATCTCCTGGGAGCGGGA---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949292 161 + 60714840 ACGATCTGGCGACTCCGAGTGTAGCCCTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAACACAAAGTTGACCCCAGCGATGAAGATGGACGGAAGGTAATTCACCCCAAGCTTCAGCAGTGGCAACTCCTGGACAAGGGACATCTCCTGGGAGGGGGA---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715322 161 - 106955855 ACGATCTGGCGACTCCGAGTGTAGCCCTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAGAACAAAGTTGACCACAGCGATGAAGATGGACGGAAGGTAATTCACCCCAAGCTTCAGCAGTGGCAACTCCTGGACAAGGGGCATCTCCTGGGAGGGAGA---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60003682 161 + 64156825 ACGATCTGGAGACTTCTAGTGTAGCCTTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAGCACAAAGTTGACCCCAGCGATGAAGATGGACGGAAGGTAATTCACCACAAGCTTCAGCAGTGGCAACTGCTGAACAAGGGGCTTCTCCTGGGAGAGGGA---- i rheMac3.chr19 C 0 I 384 s macFas5.chr19 55027160 161 + 59248254 ACGATCTGGAGACTTCTAGTGTAGCCTTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAGCACAAAGTTGACCCCAGCGATGAAGATGGACGGAAGGTAATTCACCACAAGCTTCAGCAGTGGCAACTGCTGAACAAGGGGCTTCTCCTGGGAGAGGGA---- i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47133404 161 + 51301725 ACGATCTGGCGACTTCTAGTGTAGCCTTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAGCACAAAGTTGACCACAGCGATGAAGATAGACGGAAGGTAATTCACCACAAGCTTCAGCAGTGGCAACTGCTGAACAAGGGGTGTCTCCTGGGAGAGGGA---- i papAnu2.chr19 C 0 I 1 s mm10.chr7 3670952 161 + 145441459 ACGATCTGTCGGCTTTGAGTGTAGCCCTCTAGTGAGGCAATGAACTTGAACACAGGAGGCAGCACAAAGTTGAACAGAGAAATGAAGATGGATGGTAGATAATCCACCAGAAGCTTGAATAGTGGGGTCTGTCGGACAAGGGGCGTCTCCTGAAAGGGAGA---- i mm10.chr7 C 0 I 46 s canFam3.chr1 19627220 165 - 122678785 GCAATCTGGTGGCTCCTGGTGTAGCCCTCCAGCAGGGCGATGAGCTTGAACACAGGTGGCAGCAAGAAGTTAACCCCAGAGATGAAGATGGATGGAAGGTAATCCACCAGGAGCTTTAGCAGTGGCATCTGCTGGACAGAGGGCGTCTCCTGGGAGAGAGGGTGG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45418117 244 + 49145316 M e chlSab2.chr6 46844259 58 + 50890351 I a score=119309.000000 s hg38.chr19_GL949747v2_alt 138745 59 + 729520 TGGACCATGAGTAGAGGCT-TGGGGTCCTGG-----AGGAGCCAAGCTTAAGGTCCTCCCCCCGG s panTro4.chr19 59072788 59 + 63644993 TGGACCATGAGTAGAGGCT-TGGGGTCCTGG-----AGGAGCCAAGCTTAAGGTCCTCCCCCCGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949453 59 + 60714840 TGGACCATGAGTAGAGGCT-TGGGGTCCTGG-----ACGAGCCAAGCTTAAGATCCTCCCCCCGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715483 59 - 106955855 TGGATCATGAGTAGAGGCT-TGGGGTCCTGG-----AGGAGTCAAGCTTAAGGTCCTCCCCCCGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60004227 59 + 64156825 TGGACCATGAGTAGAGGCT-TGGGGTCCTGG-----AGGAGCCAAGCTTAAGGTCCTCCCCCAGA i rheMac3.chr19 I 384 C 0 s macFas5.chr19 55027322 59 + 59248254 TGGACCATGAGTAGAGGCT-TGGGGTCCTGG-----AGGAGCCAAGCTTAAGGTCCTCCCCCAGA i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47133566 59 + 51301725 TGGACCATGAGTAGAGGCT-TGGGGTCCTGG-----AGGAGCTAAGCTTAAGGTCCTCCTCCAGA i papAnu2.chr19 I 1 C 0 s canFam3.chr1 19627385 64 - 122678785 TGGATCAAGCAAAGAAGCTCTGGGCTTCTGGTCCTCCAGAACCTTGCTAAATGTCCTCCCCCAG- i canFam3.chr1 C 0 C 0 e mm10.chr7 3671113 46 + 145441459 I e calJac3.chr22 45418117 244 + 49145316 M e chlSab2.chr6 46844259 58 + 50890351 I a score=13926.000000 s hg38.chr19_GL949747v2_alt 138804 13 + 729520 CCTCTTCttc--------ttc s panTro4.chr19 59072847 13 + 63644993 CCTCTTCTTC--------ttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949512 7 + 60714840 CCtcttt-------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715542 13 - 106955855 CCtcttcttc--------ttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60004286 21 + 64156825 CCTCTTCTTTGTTGTttattt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55027381 17 + 59248254 CCTCTTCTTTGttg----ttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133625 17 + 51301725 Cctcttctttgttg----ttt i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45418362 12 + 49145316 -Ctttttttt--------ttt i calJac3.chr22 M 244 C 0 s canFam3.chr1 19627449 13 - 122678785 CCTTTTCTTC--------CTC i canFam3.chr1 C 0 C 0 e mm10.chr7 3671113 46 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I a score=236005.000000 s hg38.chr19_GL949747v2_alt 138817 121 + 729520 ttcttc-----tttttttttttttttttgagacagagtctcgctctgttgcccagcctagaatgcagcggtgcgatctcggctcgc-tgcaacctctgcctcccgggttcaagtgattctcctgcct s panTro4.chr19 59072860 125 + 63644993 ttcttcc-ttttttttttttttttttttgagacagagtctcgctctgttgcccaggctagagtgcagtggtgcgatctcggctcgc-tgcaacctctgcctcccgggttcaagtgattctcctgcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949519 115 + 60714840 -----------tttttttttttttttttgagacagagtctcgctctgttgcccaggctggagtgcagtggtgcgatctcggctcgc-tgcaacctctgccactctggttcaagtgattctcccacct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715555 117 - 106955855 tt---------tttttttttttttttttgagacagagtcttgctctgttgcccaggctggagtgcagtggtgcgatctcggctcgc-tgcaacctccgcctcccgggttcaagtgattctcctgcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60004307 122 + 64156825 ttgt----tttgtttctttgtttgttttgagacagagtctggctctgtcacccaggctggagtgcagtggtgcaatcttggctcac-tgcaacctccgcctcccgggttcaagtgattcttctgcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55027398 122 + 59248254 ttgt----tttgtttctttgtttgttttgagacagagtctggctctgtcacccaggctggagtgcagtggtgcaatcttggctcac-tgcaacctccgcctcccgggttcaagtgattcttctgcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133642 126 + 51301725 ttgttttgtttgtttctttgtttgttttgagacagagtctggctctgtcacccaggctggagtgcagtggtgcaatcttggctcac-tgcaaccttcgcctcccgggttcaagtgattcttctgcct i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45418374 121 + 49145316 tt------ttttttttttttttttttttttgaaaaagtctgactctgtcactcagggtggagtgcaatggcgtgatctcgggtcacttgcaacctccgcttcccaggttcaagcaattctcctggat i calJac3.chr22 C 0 C 0 e mm10.chr7 3671113 46 + 145441459 I e canFam3.chr1 19627462 0 - 122678785 C e chlSab2.chr6 46844259 58 + 50890351 I a score=474212.000000 s hg38.chr19_GL949747v2_alt 138938 243 + 729520 cagcctcctgagtagctgggattacaggcgcccaccaccacgcccgtctaa-tttttgtatttttagtagagactgtttttcaccatgttggtcaggctggtctggaactcctgacatcgtgat-ccgcccgcctcagcctcccaaagtgctgggattacaggtgtaagccaccgcgcccagccTCTCTTTTTCCTTTAAAATCCCTAAGTCCAGGGTCCGAACATACCCTCTCCCATACTTCCT s panTro4.chr19 59072985 243 + 63644993 cagcctcctgagtagctgggattacaggcgcccaccaccacgcccgtctaa-tttttgtatttttagtcgagacgggttttcatcatgttggtcaggctggtctggaactcctgacctcgtgat-ccgcccgccttagcctccctaagtgctgggattacaggcgtaagccaccgcgcccagccTCTCTTCTTCCTTTAAAATCTCTAAGTCCAGGATCGGAACATACCCTCTCCCATACTTCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949634 241 + 60714840 cagcctcctgagtagctgggattacaggcgctcaccaccacgcctgtctaa-tttttgtatttttagtaaagatgggttttcaccatgttggtcaggctggtctggaactcctgaccttgtgat-ccgcccgtctcagcctcccaaattgccgggattacaggcgtgagccaccgcgcccagccTCTCTTCTTCCTTTAAAATCCCTAAGTCCAGGGTCCAAACATACCCTCTCCCATACTTC-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715672 237 - 106955855 cagcctcctgagtagctgggattacaggcgc------ccacgcccgtctaa-tttttgtatttttagtagagacgggttttcaccatgttggtcaggctggtctggaactcctgacctcgtgat-ccgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagccTCTCTTCTTCCTTTAAAATCCCTAAGTTCAGGGTCCAAACATACCCTCTCCCATACTTCCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60004429 244 + 64156825 cagcctcctgagtagctgggattacaggcgtgcaccaccacgcccgtctaa-tttttgtatttttagtggagacggattttcgccatgttggtcaggctggtctcgaactcctgacctcgtgatcccccccgcctcagcctcccaaagtgctgggattacaggcgtgagctaccgcgcccagtcTCTCTTCTTCCTTTAAAACCCCGAAGTCCAGGGTCCAAACATACCCTCTCCCATACTTCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55027520 243 + 59248254 cagcctcctgagtagctgggattacaggcgtgcaccaccacgcccgtctaa-tttttgtatttttagtggagacggattttcgccatgttggtcaggctggtctcgaactcctgacctcgtgat-ccccccgcctcagcctcccaaagtgctgggattacaggcgtgagctaccgcgcccagtcTCTCTTCTTCCTTTAAAACCCCGAAGTCCAGGGTCCAAACATACCCTCTCCCATACTTCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133768 243 + 51301725 cagcctcctgagtagctgggattacaggcgtgcaccaccacgcccgtctaa-tttttgtatttttagtggagacggattttcgccatgttggtcaggctggtctcgaactcctgaccttgtgat-caccccacctcagcctcgcaaagtcctgggattacaggcgtgagccaccgcgcccagtctctcttcttcctttaaaaCCCCGAAGTCCAGGGTCCAAACATACCCTCTCCCATACTTCCT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45418495 193 + 49145316 cagcctcctgagtaactgaaattacaggcacgcgccaccacgcccagctaattttttgtatgtttaataaaaatggggtttcactatgttggccaggctggtctcgaactcctgacttcgtgat-ccgcccgcctcggcctcccacagtgctggaattgcaggcgtgagccaccgcgcacggcc-------------------------------------------------CCCTTACTTC-- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19627462 94 - 122678785 CAGCACCCCAA---------AGTCCAAACATACACCCCCAT-CCCTCCTAA----------------------------------------------------------------------GAT-GCCCTC----CAACCT----------TGGAAATGTAAGT----------------------------------------------TCCAGGATGGAAGGACTCTCCTCCC---------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3671113 46 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I a score=3626012.000000 s hg38.chr19_GL949747v2_alt 139181 1486 + 729520 CTCTAAGATCTCTGGCATCCCAAACTTCCGTCCCCTCC----------CTCCACCGTTGGAAATGTAGGTTCCAGGACCC----CCTGGCTTCCTCTTCCAAGACCGTCCGCACCTGCAGCTCCACGGTGCACCCCGTAGCCCAGTAGACGCCATAGAAGGCTGCCCCCAGGAGCGCGACCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTGCTGGCCCAGCGTCCGCACCGCAGCCTGGCGCCGCACCACTGTCTCCTCCAGCTCCACCTGAAGGCAGGAGAGATGCCCGCTTGGACTCCATTTCCCAA-GGCGCGGGCCTCCCGGTTCCCCAGGTCTGGCTCTCCAGAGATCCTCCTTAACGTGAACTGATGCA-GCCGTCTCCCCACCCGCTAACAACCTCTGCAG----TCC-----TGGTTC----------CACC----------------CGC----------TCCAGGAAACCAGC---------GGCCCTTTACA--------GCCCCGCCC-----------CTTCGCGGCC-------------------------------------------------------GGATCCAGCAACCCAAGCCCCCATCCCTCCGCGGTCAAT--CTCAGCACCCCAGGCCCCGCCCCTGAGGCTCCGCCCAGCA-TCCCAAGACCCGCCCCTGGTCAGCCCTGCCCA----TCAGAGGCTCCGCCCCCAGGTGGCCCTGCGCTTTATTCCTGGCCT-----GAAGTTCCAGTTCAGCTG-TATCAAG--AC-GCCCTGCTGGCCGCTCCCATCACTTAACTTTGAACCAAATTGCCTT-AGGCCCCGCCCGCTTCTTGTGCTTACTTAAAAAAAAAC---A-----AACTTttttttttttttttt--------ggtagagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggtctcgaactcctagac--tgaagcgatccac-------ctgtctcggtct-------------cccaa----------agtgctggggttacaagcattagccaccgatcccagccCTGGCGCATCCTTTTCCTACACGCTTGGA---GCTCGGGCAGCCCTATCTCGGCCTCCTCTCAACCTTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCTTAGCATCTCTCCGGAGGCCCCATCACCGAGTTAGGCCCTGTGCGTTATCTCAGCCCGGTCCTGTCTGGTCCCTACCCAGTTGCAGACCCCGCTCCCTAATCGCACCTTTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCAGAGACCGAAGTCCCAGGCCGAGAACACCCGGTGGCTGTAGCTGGTCAGAGCCTCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCAGACACCGAGCTGAGAGGGG-AGACCCGGGAGACGGGAAGTGAAAGGACAGCCAGGAACGGGGGTTATGGGGAGACCCCTCATATTGGGACAAATGGGGAAGATGAACCCTAAGGCCTTGGGTACTAGGCGAGTTCCCACCAGACCAGATGGGGAAAGAGTCAAAGAGGCGGAGAC----ACAGTCATT-GAAGGCAAAGTCCAAGGGA--GATTCAGAGACAGTTCTGGGGTG------CAGGCACCCCAA--AGAGAGGCAGAAACCTAGGAGACAG s panTro4.chr19 59073228 1498 + 63644993 CTCTAAGGTCTCTGGCATCCCAAACTTCCGTCCCCTCC----------CTCCACCGTTGGAAATGTAGGTTCCAGGACCC----CCTGGCTTCCTCTTCCAAGACCCTCCGCACCTGCAGCTCCACGGTGCACCCCGTAGCCCAGTAGACGCCGTAGAAGGCTGCCCCCAGGAGCGCGACCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTGCTGGCCCAGCGTCCGCACCGCAGCCTGGCGCCGCACCACTGTCTCTTCCAGCTCCACCTGAAGGCAGGAGAGATGCCCGCTTGGACTCCATTTCCCAG-GGCGCGGGCCTCCCGGTTCCCCAGGCCTGGCTCTCCAGAGATCCTCCTTAACGTGAACTGATGCA-GCCGTCTCCCCACCCGCTAACAACCTCTGCAG----TCC-----TGGTTC----------CACCCGC------TCCGGGGCGC----------TCCAGGAAACCAGC---------GGCCCTTTACA--------GCCCCGCCC-----------CTTCGCGGCC-------------------------------------------------------GGACACAGCAACCCAAGCCCCCATCCCTCCGCGGCCAAT--CTCAGCACCCCAGGCCCCGCCCCTGAGGCTCCGCCCAGCA-TCCCAAGACCCGCCCCTGGTCAGCCCTGCCCA----TCAGAGGCTCCGCCCCCAGGTGGCCCTGCGCTTTATTCCTGGCCT-----CAAGTTCCAGTTCAGCTG-TATCAAG--AC-GCCCTGCTGGCCGCTCCCATCACTTAACTTTGAACCAAATTGCCTT-AGGCACCGCTCGCTTCTTGTGCTTACTTAGAAAAAAAA---Attttttttttttttttttttttttt--------ggtagagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggtctcgaactcctagac--tcaagtgatccac-------ctgcctcggtct-------------cccaa----------agtgctggggttacaagcatgagccaccgatcccagccCTGGCGCATCCTTTTCCTACACCCTTGGA---CCTCGGGCAGCCCTATCTCGGCCTCCTCTCAACCCTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCTTAGCATCTCTCCGGAGGCCCCATCACCGAGTTAGGCCCTGTGCGTTATCTCAGCCCGGTCCTGTCTGGTCCCTACCCAGTTGCAGACCCCGCTCCCTAATCGCACCTTTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCAGAGACCGAAGTCCCAGGCCGAGAACACCCGGTGGCTGTAGCTGGTCAGAGCCTCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCAGACACCGAGCTGAGAGGAG-AGACCCGAGAGATGGGATGTGAAAGGACAGCCAGGAA-AGGGGTTATGGGGGGACCCCTCATATTGGGACAAACGGGGAAGATGAACCCTAAGGCCTTGGGTACTAGGCGAGTTCCCACCAGACCAGATGGGGAAAGAGTCAAAGAGGTGGAG------ACAGTCATT-GAAGGCAAAGTCCAAGGGA--GATTCAGAGACAGATCTGGGGTG------CAGGCACCCCAA--AGAGAGGCAGAAACCTAGGAGACAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949875 1490 + 60714840 --CTAAGATCTCTGGCATCCCAAACTTCCGTCCCCTCC----------CTCCACCGTTGGAAATGTAGGTTCCAGGACCC----CCTGGCTTCCTCTTCCAAGACCCTCCGCACCTGCAGCTCCACGGTGCACCCCGTAACCCAGTAGACGCCATAGAAGGCTGCCCCCAGGAGCGCGACCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTGCTGGCCCAGCGTCCGCACCGCAGCCTGGCGCCGCAACACTGTCTCCTCCAGCTCCACCTGAAGGCAGGAGAGATGCCCGCTTGGACTCCATTTCCCAA-GGCGCGGGCCTCTCGGTTCCCCAGGCCTGGCACTCCAGAGATCCTCCTTAACGTGAACTGATGCA-GCCGTCTCCCCACCCGCTAACAACCTCTGAAG----TCC-----TGGTTC----------CACCCGC------TCCGGGGCGC----------TCCGGGAAACCAGC---------GGCCCTTTACA--------GCCCCGCCC-----------CTTCGCGGCC-------------------------------------------------------AGATCCAGCAACCCAAGCCCCCATCCCTCCGCGGCCAAT--CTCAGCACCCCAGGCCCCGCCCCTGAGGCTCCGCCCAGCA-CCCCAAGGCCCGCCCCTGGTCTGCCCTGCCCA----TCAGAGGCTCTGCCCCCAGGCGGCCCTGCGCTTTATTCCTGGCCT-----GAAGTTCCAGTTCAGCTG-TATCAAG--AC-GCCCCGCTGGCTGCTCCCATCACTTAACTTTGAACCAAATTGCCTT-AGGCCCCGCCCGCTTCTTGTGCTTACTTTAAAAAAAACCAAA-----AACTTtcttttttttttttt------agggtagagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggtctcg-------------tcaagcgatccac-------ctgcctcggtct-------------cccaa----------agtgctggggttacaagcttgagccaccgatcccagccCTGGCGCATCCTTTTCCTACACCCTTGGA---CCTCGGGCAGCCTTATCTCGGCCTCCTCTCAACACTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCCTAGCATCTCTCCGGAGGCCCCATCACCGAGTTAGGCCCTGTGCGTTATCTCAGCCCGGTCCTGTCTGGTCCTTACCCAGTTGCAGACCCCGCTTCCTAATCGCACCTTTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCAGAGGCCGAAGTTCCAGGCCGAGAACACCCGGTGGCTGTAGCTGGTCAGAGCCTCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCAGACACCGAGCTGAGAGGGG-AGACCCGGGAGATGGGATGTGAAAGGACAGCCAGGAACAGGGGTTATGGGGGGACCTCTCATATTGGGACAAACGGGGAAGATGAACCCTAAGGCCTTGGGTACTAGGCGAGTTCCCACCAGACCAGATAGGGAAAGAGTCAAAGAGGCGGAGAC----ACAGTCATT-GAAGGCAAAGTCCTGGAGA--GATTCAGAGACAGATCTGGGGTG------CAGGCACCCcaaagagagaggcagaaaccgaggagacag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715909 1501 - 106955855 CTCTAAAATCTCTGGTATCCCAAACTTCCGTCCCCTCC----------CTCCACCGTTGGAAATGTAGGTTCCAGGACCC----CCTGGCTTCCTCTTCCAAGACCCTCCGCACCTGCAGCTCCACGGTGCACCCCGTAGCCCAGTAGATGCCATAGAAGGCTGCCCCCAGGAGCGCGACCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTGCTGGCCCAGCGTCCGCACCGCAGCCTGGCGCCGCACCACTGTCTCCTCCAGCTCCACCTGAAGGCAGAAGAGATGCCCGCTTGGACTCCATTTCCCAA-GGCGCGGGCCTCTCGGTTCCCCAGGCCTGGCTCTCCAGAGATCCTCCTTAACGTGAACTGATGCAGGCGGTCTCCCCACCCGCTAACAACCTCTGCAG----TCC-----TGGTTC----------CACTCGC------TCCGGGGCGC----------TCCAGGAAACCAGC---------GGCCCTTTACA--------GCCCTGCCC-----------CTTCGCGGCT-------------------------------------------------------GGATCCAGCAACCCAAGCACCCATCCCTCCGCGGCCAAT--CTCAGCACCCCAGGCCCCGCCCCGGAGGCTCCGCCCAGCA-TCCCAAGACCCGTCTTTCGTCAGCCCTGCCCA----TCAGAGGCTCCGCCCCCAGGCGGCCCTGCGCTTTATTCCTGGCCT-----GAAGTTCCAGTTCAGCTG-TTTCAAG--ACGGCCCCGCTGGCCGCTCCCATCACTTAACTTTGAACCAAATTGGCTT-AGGCCCCGCCCGCTTCTTGTGCTTACTTAAAAAAAAAA---A-----AAAGTttttttttttttt----------ggtatagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggtctcgaactcctagac--tcaagcgatccac-------ctgcctcggtct-------------cccaa----------agtgctggggttacaagcatgagccaccgatcccagccCTGGCGCATCCTTTTCCTACACCCTTGGACCTCCTCGGGCAGCCCTATCTCGGCCTCCTCTCAACCCTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCCTAGCATCTCTCCGGAGGCCCCATCACCGAGTTAGGCCCTGTGCGTTATCTCAGCCCGGTCCTGTCTGGTCCCTACCCAGTTGCAGATCCCGCTCCCTAATCACACCTTTAATTCGTACAAGATGATGCGCTGTCGCAGCCGCACGTGGACGTCCCCGCAGAGGCCGAAGTCCCAGGCCGAGAACACCCGGTGGCTGTAGCTGGTCAGAGCCTCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCAGACACCGAGCTGAGAGGGG-AGACCCGGGAGACGGGATGTGAAAGGACAGTCAGGAACGGGGGTTATAGGGGAACCCCTCATACTGGGACAAACGGGGAAGATGAACCCTAAGGCCTTGGGTACTAGGCGAGTTCCCACCAGACCAGATGGGGAAAGAGTCAAAGAGGCAGAGAC----ACAGTCATT-GAAGGCGAAGTCCAAGGGA--GATTCAGAGACAGATCTGGGGTG------CAGGCACCCCAAAGAGAGAGGCAGAAACCTAGGAGACAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60004673 1457 + 64156825 CTGTAAGATCTCTGGCATCCCAAACTTCCATTCCCTCC----------CTCCATCGTTGGAAATGTAGGTTCCAGGA-CC----CCCGGCTTCCTCTTCCAAGACCCTCCGCACCTGCAGCGCCACGGTGTTCTCTGTAGCCCAGTAGATGCCATAGAAGGCTCCCCCAAGGAGTGCGATCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTCCTGGCCCAGAGTCCGCACAGCAGCCTGGCGCCGCACCACTGTCTCCTCCAGCTCCACCTGAAGGCACGAGAGATGCCCGCTTGGACTCCATTTCCCAA-GGCGCTGGCCTCTGGGTTCCCCA-----GGCTCTCCAGAGATCCTCCTCAACGTGAACTGATGCA-GCCTTCTCCCCACCAGCTAACAACCTCTGCAG----TCC-----CGGTTC----------CACCCGC------TCCGGGGCGC----------TCTAAGAAACCAGT---------GGCCCTTTACA--------GCCCTGCCC-----------CTCCGCGGCC-------------------------------------------------------GGATCCAGCAACCCAAGCCCCCATCCCTGCGCGACCAAT--CTCAGCACCCCGGGCCCCGCCCCCGAAGCTCCGCCCAACACCCCCAAGACCCGCCCCTGGTCAGCCCCGCCCA----TCAGAGGCTCCGCCCCCAGGCGGCCCTGCGCTTTATGCCTGGCCT-----GAAGTTCCAGTTCATCTA-TATCAAG--AC-GCCCCGCTGGCCGTTCCCATCACTTAACTTTGAACCAAATTGCCTTAAAGCCCCGCCCGCTTCTTGTGCTT-----------------A-----------------CTTttttt--------ggtagagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggcgtctaactcctagac--tcaagcgatccac-------ctgcctcggtct-------------cccaa----------agtgctggggttacaagcatgagccaccgatcccagccTTGGTGCATCTTTTTCCTACACCCTTGGA---TCTCGGGCAGCCTTATCGCGGCCTCCTCTCAACCCTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCCTAGCGTCTCTCCGGAGGCCCCATCACCGGGTTAGGCCCTGTGCGTTATCTCAGCCCAGTCCTGTCTGGTCCCTACCCCGTTGCATAACCCGC-CCCCAATCGCACCTGTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCAGAGACCGAAGTTCCAGGCTGAGAACACCCGGTGGCTGTAGCTGGTCAGATCCCCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCGGACACCGAGCTGAGAGGAG-AGAC---------AGGATGTGAAAGGACAGCCAGGAACGGGGGTTATGGGGGCATCCTTCATATTGGGACCAACGGGGAAGACGAACCCTAAGGCCTTGGGTACTAGCGGAGCTGCC-----ACCAGATGGGGAAAGGGTCAAAGAGGCGGAGACACCTACAATCATT-GAAGGCAAAGTCCAAGGGA--GATTCAGAGACAGACCTGGGGCA------CAGGCACCCcacagagagaggcagaaacctaggagacag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55027763 1457 + 59248254 CTGTAAGATCTCTGGCATCCCAAACTTCCATTCCCTCC----------CTCCATCGTTGGAAATGTAGGTTCCAGGA-CC----CCCGGCTTCCTCTTCCAAGACCCTCCGCACCTGCAGCGCCACGGTGTTCTCTGTAGCCCAGTAGATGCCATAGAAGGCTCCCCCAAGGAGTGCGATCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTCCTGGCCCAGAGTCCGCACAGCAGCCTGGCGCCGCACCACTGTCTCCTCCAGCTCCACCTGAAGGCACGAGAGATGCCCGCTTGGACTCCATTTCCCAA-GGCGCTGGCCTCTGGGTTCCCCA-----GGCTCTCCAGAGATCCTCCTCAACGTGAACTGATGCA-GCCTTCTCCCCACCAGCTAACAACCTCTGCAG----TCC-----CGGTTC----------CACCCGC------TCCGGGGCGC----------TCTAAGAAACCAGT---------GGCCCTTTACA--------GCCCTGCCC-----------CTCCGCGGCC-------------------------------------------------------GGATCCAGCAACCCAAGCCCCCATCCCTGCGCGACCAAT--CTCAGCACCCCGGGCCCCGCCCCCGAAGCTCCGCCCAACACCCCCAAGACCCGCCCCTGGTCAGCCCCGCCCA----TCAGAGGCTCCGCCCCCAGGCGGCCCTGCGCTTTATGCCTGGCCT-----GAAGTTCCAGTTCATCTA-TATCAAG--AC-GCCCCGCTGGCCGCTCCCATCACTTAACTTTGAACCAAATTGCCTTAAAGCCCCGCCCGCTTCTTGTGCTT-----------------A-----------------CTTttttt--------ggtagagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggtgtcgaactcctagac--tcaagcgatccac-------ctgcctcggtct-------------cccaa----------agtgctggggttacaagcatgagccaccgatcccagccTTGGTGCATCTTTTTCCTACACCCTTGGA---TCTCGGGCAGCCTTATCGCGGCCTCCTCTCAACCCTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCCTAGCGTCTCTCCGGAGGCCCCATCACCGGGTTAGGCCCTGTGCGTTATCTCAGCCCAGTCCTGTCTGGTCCCTACCCCGTTGCATAACCCGC-CCCCAATCGCACCTGTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCAGAGACCGAAGTTCCAGGCTGAGAACACCCGGTGGCTGTAGCTGGTCAGATCCCCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCGGACACCGAGCTGAGAGGAG-AGAC---------AGGATGTGAAAGGACAGCCAGGAACGGGGGTTATGGGGGCATCCTTCATATTGGGACCAACGGGGAAGACGAACCCTAAGGCCTTGGGTACTAGCGGAGCTGCC-----ACCAGATGGGGAAAGGGTCAAAGAGGCGGAGACACCTACAATCATT-GAAGGCAAAGTCCAAGGGA--GATTCAGAGACAGACCTGGGGCA------CAGGCACCCCACAGAGAGAGGCAGAAACCTAGGAGACAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47134011 1442 + 51301725 CTGTAAGATCTCTGGTATCCCAAACTTCTGTTCCCTCC----------CTCCATCGTTGGAAATGTAGGTTCCAGGACCC----CCCGGCTTCCTCTTCCAAGACCCTCCGCACCTGCAGCGCCACGGTCATCTCTGTAGCCCAGTAGATGCCATAGAAGGCTCCCCCAAGGAGTGCGATCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTCCTGGCCCAGAGTCCGCACAGCAGCCTGACGCCGCACCACTGTCTCCTCCAGCTCCACCTGAAGGCACGAGAGATGCCCGCTTGGACTCCATTTCCCAA-GGCGCTGGCCTCTGGGTTCCCCA-----GGCTCTCCAGAGATCCTCCTCAACGTGAACTGATGCA-GCCGTCTCCCCACCCGCTAACAACCTCTGCAG----TCC-----CGGTTC----------CACCCGC------TCCGGGGCGC----------TCTAAGAAACCAGT---------GGCCCTTTACA--------GCCCTGCCC-----------CTCCGCGGCC-------------------------------------------------------GGATCCAGCAAccccagcccccatccctgcgcggccaat--ctcagcaccccgggccccgcccccgaagctccgcccaacacccccaaga----------------cccgccca----tcagaggctccgcccccaAGCGGCCCCGCGCTTTATGCCTGGCCT-----GAAGTTCCAGTTCATCTA-TATCAAG--AC-GCCCCGCTGGCCGCTCCCATCACTTAACTTTGAACCAAATTGCCTTAAAGCCCCGCCCGCTTCTTGTGCtt-----------------a-----------------cttttttt--------ggtagagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggtgtcgaactcctagac--tcaagcgatccac-------ctgcctcggtct-------------cccaa----------agtgccggggttacaagcatgagccaccgatCCCAGCCTTGGTGCATCTTTTTCCTACACCCTTTGA---TCTCGGGCAGCCTTATCGCGGCCTCCTCTCAACCCTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCCTAGCGTCTCTCCGGAGGCCCCATCACCGGGTTAGGCCCTGTGCGTTATCTCAGCCCAGTCCTGTCTGGTCCCTACCCCGTTGCATAACCCGC-CCCCAATCGCACCTGTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCAGAGGCCGAAGTTCCAGGCTGAGAACACCCGGTGGCTGTAGCTGGTCAGATCCCCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCGGACACCGAGCTGAGAGGGG-AGAC---------AGGATGTGAAAGGACAGCCAGGAACGGGGGTTATAGGGGCATCCTTCATATTGGGACCAACGGGGAAGACGAACCCTAAGGCCTTGGGTACTAGGGGAGCTGCC-----ACCAGATGGGGAAAGAGTCAAAGAGGCGGAGACACCTACAATCATT-GAAGGCAAAGTCCAAGGGA--GATTCAGAGACTGACCTGGGGCA------CAGGCACCccacagagagaggcagaaaccTAGGAGACAG i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45418688 1452 + 49145316 --CTAAGATCTCTGGCGTCCCAGACTTCCGTCCCCTCC----------CTCCACCGTTGGAATTGTAGCTTCCAAGACCC----CCCGACTTCCTTTTCAAAGACCCTCCGCACCTGTAGCTCCACCGTGGACTCTGTGGCCCAGTAGACGCCATAGAACGCTGCCCCCAGGAGCGCGGCCACCAGCAGGTTGAGCAGCACCCGCACCGACCAAACCCTGGCTTGCTGGCCCAGCGTCCGCACCGCAGCCTGGCGACGCAGCATCGTCTCCTCCAGCTCCACCTGAAGGCAGGAGACGTGCCCGCTTGGACTCCATTTCCCAAGGGCGCGGGCCTCTCGGTTCCCCAGGCCTGGCTCTCCAGAGATCCTCCTCCACGTGAACTGCTGCA-GACGTCTCGCCACCCGCTAACAACCTCCGCAG----------------TC----------CACCTGC------GGCCGAGCCC----------CCCGGGAAACCTGC---------GGCCCTTTATC--------GCCCCGCCC-----------CTCCGCGGCC-------------------------------------------------------GGGTCCCGCAATCCAAGCCCCTAACCCTCTGTGGCCAAT--CTCAGCACCC--------------AAAGCTCCGCCCAGCA--TCCAAGACCCGCCCCTTGTCAGCCCCGCCCA----CCCGAGGCTCCGCCCTCAGGCGGCCCAGCGCTTC-TGCCTGACCT-----GAAGATCCAGTTCAGCGGTTAACAAG--AC-GTGCCGCTGGCCGCTCCCATCACTTAACTTTGAACCAAGTTGCCTT-AGGCCCCGCCCGCTTCTTGGGCTTACTTTAAAAAA------A-----------------TTGTTTTTGGCGAGGGGGtagagtgggagtc------------------------------------------tccctatat----------------------------tgccc--------aggctagtctcgaactcctggac--tcaaatgattcac-------ctgcctcggtct-------------cccga----------agtactggagttacaagcataagccaccgagcccATCCCTTGCGCATCTTTTTCCTACATCCTTGGA---CCTCGGGGAGCCCTATCGCGGCCTGCTCTCAACCCTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAAGAGCTTCCTAGCGTCTC-CCTGAGGCACCATCGCTGGGTTAGGCCTTGTGCCTTATCTGAGCCCAGCCCTTTCTGATCCCTACCCAGTTGCACACCGCGCCCCCTAAGCGCACCTGTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCTGAGGCCGAAATCCCAGGCCGAGAACACCCGGTGGCTGTAGCTGGTCAGAGCCCCGGACTCTGCCAGCAGTGTCTGCTTCAGCCCGGACACGGAACTGAGAGGGG-AGACCCAGGAGACGGGATGTGAAAGGACAGTCAGGAAC-GGGGTTGTGGGGGGA--------GATGGGAGAAACGGGGAAGATGAACCCTAAAGCCTTGGGCACTAGGCGAGCTGCC-----ACCTGATGG----AGAGTC--AGAGGCAGATACACATACAGTCACTAAAAGGCAAAGTCCAAGGGA--GACTGAGAGACAGACCTGGGGTG------CAGGCATCCCAAGGAGAGAGGCAGTAACCTAGGAGATAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3671159 1150 + 145441459 CCCTAAAATCCCAGGAATTCTACACCCCAGTTCACTGCCACAGGGCTTCTTCACCTGTGGAAATGTGAGTTCTAGGACCCAAGGACCCTCCTCCTCCTCCAAGACCCTCTGTACCTGTAGTGTCAAGGTGTACTCGGTGGCCCAGTAGATGCCATAGAAGGCCGCCCCGAGCAGCGCGAGGACCAGCACGTTGAGCAGCGCCCTCATCGACCACACCTTGGCTCGTTGGCTCAGAGTCTGCTCCGCAGCACGGCGCCGGACTACTGCTTCCTCTAGGTCCACCTAAGGCCAATAGGGACTGCTTCTGGAAATCCGTCCCTTCA-GGC-----------------------CTGACTTT----------TCTTCGGATTAAACCGATATA-GCCCTCTCCTT-----------------------------------GTTC----------CATACTC------TCCAGGGCTG----------TCCGTGGGACCATT---------TAATTCTTGGG--------GCACTGGGC-----------CTCTGAAGTC-------------------------------------------------------TGGACTTGCATCCCAGG--TCTGCCACTCCTTAGTTCAT--CCCAGAACTCCAAATCTCGCCCTA----------CCTTCT-GTCCAAGGCCTACCCTTCTTTGGCCCAACACAGAACCCCAGGATCCCCCTCCTATGAGAC-----------TTCCAG---------------CTAGTTCACCTT-TTTGAAGCCAC-GTCC---------------TCATTTCACTTGGGACCA----GTCTT-AGTTC------------------------------------A--------------GTCCCTTTTCT----------------------------------------------------------------------------------------------------------------------------------------------AAATGAATTCC-------AGGTCCCAGCCC-------------CCCAA-------------------------------------CCCTCCCACCC------CGTCAGTCTCCTCCA-----------TGGCAGGCATTCCTAGCCTGGCTTCTGCTTAGCTGTCT-------------------------------------CTTAGCA---------------------------ATGCCTTGCTCCTTATCTTAGTTGGATCTTGTCTGGTTCTCATTTAGTGGTAGCTCCACCTCCCCGAGCACACCTGTAGTTCATACAAAATGATGCGCTGGCGCAGCCGCACGTGCACGTCCCCGCAGAGGCCAAAATTCCAAGCTGAGAACACTCGGTGACTGTAGCTGGTCAGAATGTCTGACTCCGCCAACAGTGTCTCCTTCAACCCGGACACCGAACTGAAAGAAC-AGACCA-------------------------CAGGAGAAGTGTTGGTGGGGGCACCTTACTTAC------------GGAACATACACTCAAAATCCTGTG--ACCAGG-----TGCC-----ACCTGTT------CAAGTCAGATAGTTACAC------AAAGTCTTT-GGAACCAAAGACTGA-AGA--GAT----AGGAGAATTTAGGGGACACTGCCAGATCTCCAGAGGAAAGAGGGAGATATCTAGGAAAGAG i mm10.chr7 I 46 I 2258 s canFam3.chr1 19627556 1435 - 122678785 --------------------------------------------------------------------------------------------------CCAGGACCCTCCACACCTGAAGCTCCACGGTGGCCCCTGTAGCCCAGTAGATTCCGTAGAAGGCCGCTCCCAGGAGTGCAATCACCAGCAGATTGAGCAGGATCCGCACCGACCACACCCTGGCTTGCTGGCCCAGGGTCCGCGCTGCAGCCTGGCGCCGCACCACAGCTTCCTCCAGCTCCACCTGAGGCCAGGAAAGACGTCCTTGTGGGCTCAAGTCCCACA-GACA----------GGCCCGGCA-----GGTGGTTCAGAACCCCAGCTCAACATGAACTGACACA-GCAG------CACCCTCTAAAGACTTCTGCAGgggatccctggatggctcggtggtttagcacctgcctttgacccagggcgtgatcctggagtcccgggatcgagttccgcatcaggctctctgcatggagcctgcttcaccctctgcctgtgtctctgcgtctctctgtgtctctcatgaataaataaataaaatcttaaaaaaaaaAAAAAAAAAAAGACTTCTGCAGTTCTTGTCCCAATCCCCCCATGGTCCTCTACTGGACAATTTAGATCTCCCACCT---------CTCCACA-GCCCAGGGCTCCAC--------ACCGCGCCCC----TCCGAGGCCCCGCCC------AGCCCT----------CCTGGGCTGGGGCGGAGTTCCAGTTCTACTT-TTTTtta--tt----------------------------------------ttttttt-aatttttatttatttatgatagtcac---------------a---------------------------------gagagagagagaggcagagacacaggcagagggagaagcaggctccatgcaccgggagcccgacgtgggactcgatcccgggtctccagaatcgcgccctgggccaaaggcaggcgccaaaccgctgcgccacccagggatcccTAGTTCTACTTTCTTGGCCTCCTTCTGGCCATGCCCAAGTCCTCACCCAGTGCAGAGG-----AGCTTCATGCCCCGCCCCCCTCCC-GCTGCCTGATTTTCCTGTCCCCTTTGA---CATCAGGTATCCCAACTGGGGCCTCGTCCCAGCCCTCTCATTTCGCAAGGCCCGCCTCCTTAGGAGAACGTTCCGCCCAGCGTCGCT--------------------TTGAGCCCCGTCTCGGGTCTGGGCCCCGCCCCCTCTGGTCCTT-------------------TCCCTGAGCTCACCTGCAGCTCATACAGGATGTTGCGCTGGCGCAGCCGCACGTGGACATCCCCACAGAGGCCGAAGTCCCAGGCGGTGAACACCCGATGGCTGTAGCTGGTCAGGGCCCCCGACTCAGCCAACAGCGTCTGTTTCAGTCCTGACACGGAGCTGAGAGAGGAAGGCCCCAGAGACGGGGTGTGGAAGGTCAGTGAGG----------GCGGGGTCACCCCTCTTAT-GGGACTAGCAGGGAA-ATGAACCCTGGGACCTTGGGAATTTGACAAGT----------------------AGAGTCAGAGACGTGCAGACACACACAGTCATG-GGAGCCAAAGACCAAGAGAGGGATTCAGGGGCCGACTGGGGAAG-----GTAGACACCCCGC--AGAGAGCCA---------------- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46844259 58 + 50890351 I a score=717222.000000 s hg38.chr19_GL949747v2_alt 140667 297 + 729520 GGACAGAGCCTCGGAGCGAAGGGGGCAGAAACCCAGAGTGAGAGAAACAGAGGCCCTGAGGA-AGACAGAGATGTGGAGGAGGGACAGAGGCCCCAGAGGGA---GATTCGGAGAAAGGGAGAAAAAGACAGTGAGAAAGGGGAAACTACATCTACAAAAGATGGGGGTCAAAGACCCATA-AGAAGTACAGGCACACAGAGAAGGGAGCTGCGGCGGGAAGAGCCGAGAAGAAGACAGAGACCCAGAGAAGATGGCAGGT--AAAGACTCAAGAGA-GGGGGCAggccaggcgcc---atggctcac s panTro4.chr19 59074726 297 + 63644993 GGACAGAGCCCCGGAGCGAAGGGGGCAGAAACCCAGAGTGAGAGAGACAGAGGCCCTGAGGA-ACACAGAGATGTGGAGGAGGGACAGAGGCCCCAAAGGGA---GATTTGGAGAAAGGGAGAAAAAGACAGTGAGAAAGGAGAAACTACATCTACAAAAGATGGGGGTCAAAGACCCATA-AGAAGTACAGGCACCCAGAGAAGGGAGCTGCGGCGGGAAGAGCCGAGAAGAAGACAGAGACCCAGAGAAGATGGCAGGT--AAAGACTCAAGAGA-GGGGGCAggccaggcgcc---atggctcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55951365 298 + 60714840 ggacagagccccggagcgaaggggacagaaacccagagtgagagagacagaggccctgagga-agacagagatgtggaggagggacacaggccccagaggga---gatttggagaaagggagacaaagacagtgagaaagGAGAAACTAAATCTACAAAAGATGAGGGTCAAAGACCCATA-AGAAGTACAGGCACCTAGAGAAGGGAGCTGCGGTGGGAAGACCCGAGAAGAAGACAGAGACCCAGAGAAGATGGCAGGT--AAAGACTCAAGAGAGGGGGGCAggccaggcgcc---atggctcac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717410 295 - 106955855 GGACAGAGCCCCAGAGCGAAGGGGGCAGAAACCCAGAGTGAGAGAGACAGAGGCCCTGAGGA-AGACAGAGATGTGGAGGAGGGACAGAGGCCCCGGAGGGA---GATTCGGAGAAAGGGAGACAAAGGCAGTGAGAAAGGAGAAACTAAATCTACAAAAGATGGGGGTCAAAGACCCATA-AGAAGTACAGGCATCCAGAGAAGGGAGCTGCGGCGGGAAGACCCG---AGAAGACAGAGACCCAGAGAAGATGGCAGGT--AAAGACTCAAGAGAGGGGGGCAggccaggcgcc---atggctcat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60006130 297 + 64156825 ggacagagccccggagcgaagggggcagaaacccagagtgaaagggacagaggccctgagga-agacagagatgtggaggagggacagaggccccagaggga---gattcgaagaaagggagacaaagacagtgagaaagGAGAAACTAAATCTACAAAAGATGGGGGTCAAAGACCCATA-AGAAGTACAGGCACCCAGAGAAAGGGGCTG-GGCGGGAAGACCCGAGAAGAAGACAGAGACCCAGAGAAGATGGCAGGT--AAAGACTCAAGAGAAGGGGGCACGCCAGGAGCC---ATGATCCAC i rheMac3.chr19 C 0 I 19 s macFas5.chr19 55029220 297 + 59248254 GGACAGAGCCCCGGAGCGAAGGGGGCAGAAACCCAGAGTGAAAGGGACAGAGGCCCTGAGGA-AGACAGAGATGTGGAGGAGGGACAGAGGCCCCAGAGGGA---GATTCGAAGAAAGGGAGACAAAGACAGTGAGAAAGGAGAAACTAAATCTCCAAAAGATGGGGGTCAAAGACCCATA-AGAAGTACAGGCACCCAGAGAAGGGGGCTG-GGCGGGAAGACCCGAGAAGAAGACAGAGACCCAGAGAAGATGGCAGGT--CAAGACTCAAGAGAAGGGGGCACgccaggagcc---atggctcac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47135453 297 + 51301725 GGACAGAGCCCCGGAGCGAAGGGGGCAGAAACCCAGAGTGAAAGGGACAGAGGCCCTGAGGA-AGACAGAGATGTGGAGGAGGGACAGAGGCCCCAGAGGGA---GATTCGAAGAAAGGGAGACAAAGACAGTGAGAAAGGAGAAACTAAATCTACAAAAGATGGGGGTCAAAGACCCATA-AGAAGTACAGGCACCCAGAGAAGGGGGCTG-GGCAGGAAGACCCGAGAagaagacagagacccagagaagaTGGCAGGT--AAAGACCCAAGAAACGGGGGCacgccaggcgcc---atggctcac i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45420140 276 + 49145316 GGACAGAGCCCCGGATCGAAGGGGCCGGAAAGCCAGTGTGAGAGGGGCAGAGGCCCTGAGGA-AGAT--GGATGCGGAGGAGGGATGGAGGTCCCAGAGGGA---GATTTGGAGAAAGGGAGACAAAGAC--TGAGAAAGGAGAAAGAAAATCTACAAAAGACCCGGGTCAGAGATCCAGA-GGAAGTACAGGCACCCAGAGAAGGGGGCTG-GGTTGGGA------------------AGACCCAGAGAAAACAGCAGGTAGAGAGAATCAAGAGA-GGGGGCAggccaggtgcg---gtggctcac i calJac3.chr22 C 0 C 0 s canFam3.chr1 19628991 262 - 122678785 ----CGCGCTCCAGAGAGCAGAGGGCGGGGACCCAGAGTGACAAAGACAAAGATCCTGGGGACAGACACAAATGTAGAGGGGAGACTGCGACCCCACTGGGAAAGGATTCAGAGAAAGTG-------GACA--GGGAAATGAGGGAAGAGGTCT-----AGAGAGAGGTCAGAGACTCAGAGGGAAGGACAGACGTCCAGAGAAGGGGGTGA-GGGAGAAAGACCC---------------------AAAGGGTGGAGGAC--TGAGACTCAAAGAAATGGGGCAgg---gacgcctgggtggctca- i canFam3.chr1 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I a score=33876.000000 s hg38.chr19_GL949747v2_alt 140964 19 + 729520 gcctgtaatcccagcactt s panTro4.chr19 59075023 19 + 63644993 acctgtaatcctggcactt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55951663 19 + 60714840 acctgtaatcccagcactt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717705 19 - 106955855 gcctgtaatcccagcactt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55029517 19 + 59248254 gcctgtaatcccagcactt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47135750 19 + 51301725 gcctgtaatcccagcactt i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45420416 19 + 49145316 acctgtaatcccagcactt i calJac3.chr22 C 0 C 0 s canFam3.chr1 19629253 19 - 122678785 gcggttgagcgtctccctt i canFam3.chr1 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I e rheMac3.chr19 60006427 19 + 64156825 I a score=144045.000000 s hg38.chr19_GL949747v2_alt 140983 81 + 729520 tgggaggccgaggggggaggatcacctgaggtcaggagtttgagac---cagcctggccaatgtggtgaaaccccgtctctact s panTro4.chr19 59075042 81 + 63644993 tgggaggccgaggggggaggatcacctgaggtcaggagtttgagat---cagcctggccaatgtggtgaaaccccatctctact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55951682 81 + 60714840 tgggaggccaaggggggaggatcacctgaggtcaggagtttgagac---cagcctggccaatgtggtgaaaccccgtctctact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717724 81 - 106955855 tgggaggccgaggggggaggatcacctgaggtcaggagtttgagac---cagcctggtcaatgtggtgaaatcccgtctctact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60006446 79 + 64156825 tgggaggccgagacgggcggatcac--gaggtcaggagatcgagac---catcctggctaacacggtgaaaccccgtctctact i rheMac3.chr19 I 19 C 0 s macFas5.chr19 55029536 49 + 59248254 tgggaggc--------------------------------cgagac---catcctggctaacacggtgaaactccctctctact i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47135769 78 + 51301725 tgggaggccgagacgggcggatcac--gaggtcaggagt-cgagac---catcctggctaacacggtgaaaccccctctctact i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45420435 81 + 49145316 cgggaggccgagtagggaggatcacctgaggtcaggagttccagac---cagcctggccaacatggtgaaaccctgtctctact i calJac3.chr22 C 0 C 0 s canFam3.chr1 19629272 75 - 122678785 ----aggctcagg-----gcatgatcctgggtctggggattgaatcccacatccggctccctgtggggagcctgcttctccctc i canFam3.chr1 C 0 I 85 e mm10.chr7 3672309 2258 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I a score=193134.000000 s hg38.chr19_GL949747v2_alt 141064 98 + 729520 aaaaa---tac-aaaaattagccaggcgtggtggtgcatgcctgtaatcccaactacttgggaggctgaggtgggaggatcacttgaacccaggaggtggag s panTro4.chr19 59075123 98 + 63644993 aaaaa---tac-aaaaattagccaggcgtggtggtgcatgcctgtaatcccaactacttgggaggctgaggtgggaggatcacttgaacccaggaggtggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55951763 98 + 60714840 aaaaa---tac-aaaaattagccaagcgtggtggtgcatgcctgtaatcccaactacttgggaggctgaggtgggaggatcacttgaacccaggaggtggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717805 98 - 106955855 aaaaa---tac-aaaaattagccaggcatggtggtgcatgcctgtaatcccaactacttgggaggctgagctgggagggtcactcaaacccaggaggtggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60006525 100 + 64156825 aaaaa--atacaaaaagctagccgggcgaggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggag i rheMac3.chr19 C 0 I 3618 s macFas5.chr19 55029585 102 + 59248254 aaaaatttttttaaaaattagccgggcgaggtggcgggcgcctgtaggcccagctactcgggaggctgaggcaggagaatggcgtaaacccgggaggcggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47135847 99 + 51301725 aaaaa---tacaaaaaactagccgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggag i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45420516 99 + 49145316 aaaaa---tttaaaaaatgagccaggtgtggtggcgggcacctgtaatcccagctacttgggaggctgagtcaggaggatcacttgaacccaggaggtggag i calJac3.chr22 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629347 85 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I a score=4863.000000 s hg38.chr19_GL949747v2_alt 141162 5 + 729520 gtcgc s panTro4.chr19 59075221 5 + 63644993 gtcgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55951861 5 + 60714840 gtCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717903 5 - 106955855 gtCAC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55029687 5 + 59248254 cttgc i macFas5.chr19 C 0 I 9250 s papAnu2.chr19 47135946 5 + 51301725 cttgc i papAnu2.chr19 C 0 I 3196 s calJac3.chr22 45420615 5 + 49145316 gttac i calJac3.chr22 C 0 I 25 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629347 85 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=10070.000000 s hg38.chr19_GL949747v2_alt 141167 25 + 729520 ---------------------CTCC----------AAAAAAAAAAAAAAAAGACCC s panTro4.chr19 59075226 26 + 63644993 ---------------------CTCC---------GAAAAAAAAAAAAAAAAAACCC i panTro4.chr19 C 0 I 118 s ponAbe2.chr19 55951866 19 + 60714840 ---------------------CTCC----------------AAAATAAAAAGGCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717908 25 - 106955855 ---------------------CTCC----------AAAAAAAAAAAAAAAAGACCC i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45420645 56 + 49145316 ctccagcctggctgacaaagactcctgctcaaaaaaaaaaaaaaaaaaaaaaaCAC i calJac3.chr22 I 25 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629347 85 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47135951 3196 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=422.000000 s hg38.chr19_GL949747v2_alt 141192 1 + 729520 A s panTro4.chr19 59075370 1 + 63644993 A i panTro4.chr19 I 118 C 0 s ponAbe2.chr19 55951885 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717933 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45420701 1 + 49145316 A i calJac3.chr22 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629347 85 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47135951 3196 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=226477.000000 s hg38.chr19_GL949747v2_alt 141193 244 + 729520 GAGA-AGACGGGCAGGTAAAGAGACTCAAGAGAGGGGGGCAAAGACCCAGGAAGGAGAT-AGAGAACCCCA-----GCAGGGGCAGAAACAGAACTGGACAAAGAGa--ccatgtgcaccttcactgccctggccccggcccccatcatctctcatgtgaacaaccacagagggccctcacatggtctccttgcttccacttgtgcccgcatataatccattctcagttcttgagccagtgggacc-ttctttt s panTro4.chr19 59075371 244 + 63644993 GAGA-AGACGGGCAGGTAAAGAGACTCAAGAGAGGGGGGCAAAGACCCAGGAAGGAGAT-AGAGAACCCCA-----GCAGGGGCAGAAACAGAACTGGACAAAGAGa--ccgtgtgcaccttcactgccctggccccggcccccatcatctctcatgtgaacaaccacagagggcccccacatggtctccttgcttccacttgtgcccgcttataatccattctcagttcttgagcgagtgggacc-ttctttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55951886 244 + 60714840 GAGA-AGACAGGCAGGTAAAGAGACTCAAGAGAGGTGGGCAAAGACCCAGGAAGGAGAT-AGAGAACCCCA-----GCAGGGGCAGAAACAGAACTGGACAAAGAGa--ccatgtgcaccttcaccgccctggccctggcccccatcatctcgcatgtgaacaaccacagagggcccccacatggtctccttgcttccacttgtgcctgcttataatccattctcggttcttgagccagtgggacc-ttctttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717934 245 - 106955855 GAGA-GGACAGGCAGGTAAAGAGACTCAAGAGAGGGGGGCAAAGACCCAAGAAGGAGAT-AGAGAACTCTA-----GCAGGGGCAGGAACAGAACTGGACAAAGAGa--ccatgtgcaccttcactgccctggccctggcccccatcatctctcacgtgaacaaccacagagggcccccacatggtctccttgcttccacttgtgcccgcttataatccattctcagtttttgagccagtgagacctttctttt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45420702 244 + 49145316 GAGACAGAC---CCCGAGAAGAGTCTCAAAAAAGGGGGGCAAAGACCCAGGAAGGAGATGGGAGAACCACAGCGGGGCAGGGGCAGACACAGAGCTGGACAGAGAGa--ccacgtgcaccttcaccgccctggccct-gcccccatcatct--catgtgaacaacctcagagggcccccacctggtctccttgcttccacctgtgcct-cttataatccattctctcttcttcagccagcaggacc-ttcttcc i calJac3.chr22 C 0 C 0 s canFam3.chr1 19629432 226 - 122678785 gaaa-agagggaaagggaaagggaaaggaagaagtggggcaaagacccagggagaggac-aaggaa----------gcagag--------aaaaCTGGGCAAAGAGATTccatatccaccctcaatgacctggcacaagcccccagaatctcttgagtggatgactacaga--actgccacctggcctc--tgcttccaccctcgccctcttg-aatccattct--gttcccacactggtggaacc-ttctttt i canFam3.chr1 I 85 I 4004 e mm10.chr7 3672309 2258 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47135951 3196 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=44574.000000 s hg38.chr19_GL949747v2_alt 141437 76 + 729520 gatgcaactcagaccgtattcccctgtttaagacctattccagggcttttcccttctcttaaaatcgaggc-TCTTT s panTro4.chr19 59075615 77 + 63644993 gatgcaactcagaccgtattcccctgtttaaaacctattccagggcttttccctgctcttaaaatcgaggcTTCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55952130 75 + 60714840 gattcaactcagaccgtattccc--atttaaaacctattccagggcttttccctgctcttaaaatcgaggcTTTTTg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102718179 77 - 106955855 gatgcaactccgactttaattcccggtttaaaacctattccagggcttttccctgctcttaaaatcgaggcTTCTTg i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45420946 61 + 49145316 ta-gcaactcagaccatatt--------------ctattccagggcttttccctgctcttccaatctaggcttctt- i calJac3.chr22 C 0 I 2664 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47135951 3196 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=48909.000000 s hg38.chr19_GL949747v2_alt 141513 91 + 729520 gccgggcgtggtggctcacgcctgtaatcccagcactttgggagaccgaggcgggtgcatcacctgaggtcaggagttcgagaccagcctg s panTro4.chr19 59075692 91 + 63644993 gccgggcatggtggctcacgcctgtaatcccagcactttgggagaccgaggcgggcgcatcacctgaggtcaggagttcgagaccagcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55952205 91 + 60714840 gccaggcgcagtggctcacgcctgtaatcccagcactttgggagaccgaggtgggcggatcacctgaggtcaggagttcgagaccagcctg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102718256 91 - 106955855 gccgggcacagtggctcacgcctgtaatcccagcactttgggagaccgaggcgggcagatcacctgaggtcaggagttcgagaccagcctg i nomLeu3.chr10 C 0 M 1121 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e calJac3.chr22 45421007 2664 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47135951 3196 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=242761.000000 s hg38.chr19_GL949747v2_alt 141604 936 + 729520 acaaacatggtgaaaccccatttctactaaaaatacaaaattagccgggcatggtggcacatgcctgtaatcccagctacttgggaggttgaggcaggaaaattgcttgaacccgggcggcggaggttgcagtgagctgagatcgcaccactgcactctagcctgggtgacagagcgagactccgtctc----aaaaaaaaaaaaaGTTGACTTTTggccaggcacattggctcatgcctgtaattccagcaccttgggaggctgaggtgagcagatctcttgagcctaggagtttgagcgcagcctgggcaacatagcaagaccctgtctctataacatt---aaaaaaaaaattttagcaagacatggtggtgcacccctgtggtcccagctgctcccgaggctgaggtaggcggatcagttgagttccggaggcccaggcttccggtgagctatgattgcaccaccgcacgctagccgggtgacagagtgagaccctgtctcaaaaaacaaaaCAgactgggtgcggtggctcacacctgtaatcccagcactttgggaggccgaggcaggtggatcacctgagatcaggagttcgagaccagcctggccaacatggcgataccccgtctctactaaaaatacaaaaaattagctgggcgtggtggccggagcctgtaaacccagctacttgggagggtgaggcagtagaatcgcttgaacccgggaggtggaggttgcagtgagccaagatcgtgccattgcactccagcctgggcgacagagtaagactctgtctcaaaaacaaacaaacaaaacaaatg------aaaaaCAAAAAC--AAATCCCAAAACCTTGA-tcttttttttttttttagatggagtttcgctctgtcgcccaggctggagtgcagtggcgcaaactcggctcactgcaagctccgcctcc s panTro4.chr19 59075783 946 + 63644993 accaacatggtgaaaccccatttctactaaaaatacaaaattagccgggcatggtggcacatgcctgtaatcccagctacttgagaggctgaggcaggaaaattgcttgaacccgggaggcggaggttgcagtgagctgaggtcacaccactgcactctagcctgggtgacagagcaagactccgtctc-aaaaaaaaaaaaaaaaGTTGACTTTTggccaggcacattggctcatgcctgtaatcccagcaccttgggaggctgaggtgagcagatctcttgagcctaggagtttgagcgcagcctgggcaacatagcaagaccctgtctctataacatt---aaaaaaaaatttttagcaagacatggtggtgcacccctgtggtcccagctgctcctaaggctgaggtaggaggatcagttgagttccggaggcccaggcttccggtgagctatgattgcaccactgcacgctagtcgggtgacagagtgagaccctgtctcaaaaaacaaaaCAgactgggtgcggtggctcacacctgtaatcccagcactttgggaggccgaggcaggtggatcacctgagatcaggagttcgagaccagcctggccaacatggcgataccccgtctctactaaaaatacaaaaaattagctgggcgtggtggctggagcctgtaaacccagctacttgggaggctgaggcagtagaatcgcttgaacccgggaggtggaggttgcagtgagccaagatcgtgccattgcactccagcctgggcgacagagtaagactctgtctcaaaaacaaacaaacaaaacaaatgaaaaaCAAAAACAAAAAC--AAATCCCAAAACCTTGAtttttttttttttttttagatggagtttcactctgtcgtccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55952296 928 + 60714840 accaacatggtgaaaccccatctctactaaaaatacaaaattagccgggcatggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggaaaattgcttgaacctgggaggcggaggttgcagtgagctgagatcgcaccactgcactctagcctgggtgacagagcgagactccgtctcaaaaaaaaaaaaaaaaaGTTGACTTTTggccaggcaccttggctcatgcctgtaattccagcaccttgggaggctgaggtgagcagatctcttgagcccaggagtttgagcgcagcctgggcaacatagcaagaccctgtctctataatattaaaaaaaaaaaaaaattagcaggacatggtgatgcgcccctgtggtcccagctgctccagaggctgaggtaggaggaccagttgagttccggaggcccaggcttccagtgagctatgattgcaccactgcactctagccaggtgacagagtgagaccctgtctcaaaaaacaaaaTAGACTCAgcgcggtggctcacacctgtaatcccagcactttgggaggccaaggcaggtggatcacctgagatcaggagttcgagaccagcctggccaacatggcgataccccgtctctactaaaaatacaaaaaattagctgggcgtggtggcgggagcctgtaaacccagctacttgggaggctgaggcagtagaatcgcttgaatccgggaggtggaggttgcagtgagccaagatcatgccattgcactccagcctgggcgacagagtaagactctgtctca-------------aaaacaaatg------aaaaacaaaaacaaaaaTCCCAAAACCTTGA-----tcttttttttttagatggagtttcgctctgtcgcccaggctggagtgcaatggcatgatcttggctcactgcaacctccacctcc i ponAbe2.chr19 C 0 I 225 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e calJac3.chr22 45421007 2664 + 49145316 I e nomLeu3.chr10 102718347 1121 - 106955855 M e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47135951 3196 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=1213.000000 s hg38.chr19_GL949747v2_alt 142540 3 + 729520 tgg s panTro4.chr19 59076729 3 + 63644993 tgg i panTro4.chr19 C 0 I 188 s nomLeu3.chr10 102719475 3 - 106955855 TGA i nomLeu3.chr10 M 1121 C 0 s papAnu2.chr19 47139147 3 + 51301725 tga i papAnu2.chr19 I 3196 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e ponAbe2.chr19 55953224 225 + 60714840 I e calJac3.chr22 45421007 2664 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=558.000000 s hg38.chr19_GL949747v2_alt 142543 2 + 729520 gC s panTro4.chr19 59076920 2 + 63644993 gc i panTro4.chr19 I 188 C 0 s nomLeu3.chr10 102719478 2 - 106955855 GC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47139150 2 + 51301725 ga i papAnu2.chr19 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e ponAbe2.chr19 55953224 225 + 60714840 I e calJac3.chr22 45421007 2664 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=8476.000000 s hg38.chr19_GL949747v2_alt 142545 12 + 729520 CACCGCTCCTGG s panTro4.chr19 59076922 12 + 63644993 caccgctcctgg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102719480 12 - 106955855 CACTGCGCCTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60010243 12 + 64156825 caccgcacccgg i rheMac3.chr19 I 3618 C 0 s papAnu2.chr19 47139152 12 + 51301725 caccgcgcccag i papAnu2.chr19 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e ponAbe2.chr19 55953224 225 + 60714840 I e calJac3.chr22 45421007 2664 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=50500.000000 s hg38.chr19_GL949747v2_alt 142557 43 + 729520 CCCAAAACCTTGATTTTAACTCACACAGAATAAAGGGTTACAC s panTro4.chr19 59076934 43 + 63644993 ccCAAAACCTTGATTTTAACTCACACAGAATAAAGGGTTACAC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102719492 43 - 106955855 CCCAAAACCTTGATTTTAACTCACATAGAATAAAGGGTTATAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60010255 43 + 64156825 cACAAAACCTTGATTTGAACTCACACAGAAGAAAGGGTTACAC i rheMac3.chr19 C 0 I 3 s papAnu2.chr19 47139164 43 + 51301725 caCAAAACCTTGATTTGAACTCACACAGAAGAAAGGGTTACAC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45423671 43 + 49145316 CCCCAAATCTTGATTTTAACTGAAACAGAAGAAAGGGTTACAC i calJac3.chr22 I 2664 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e ponAbe2.chr19 55953224 225 + 60714840 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=1566.000000 s hg38.chr19_GL949747v2_alt 142600 3 + 729520 AGC s panTro4.chr19 59076977 3 + 63644993 AGC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102719535 3 - 106955855 AGT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47139207 3 + 51301725 CGC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45423714 3 + 49145316 AGC i calJac3.chr22 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e ponAbe2.chr19 55953224 225 + 60714840 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60010298 3 + 64156825 I a score=9180.000000 s hg38.chr19_GL949747v2_alt 142603 97 + 729520 AAGACCGAGGATTCTGGggccgggcgcggtggctcacgcctgtaatcccagcactgtgggaggccgaggcgggtggatcacgaggtcagcagttcaa s panTro4.chr19 59076980 97 + 63644993 AAGACCGAGGATTCTGGggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacgaggtcagcagttcaa i panTro4.chr19 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e ponAbe2.chr19 55953224 225 + 60714840 I e calJac3.chr22 45423717 0 + 49145316 C e nomLeu3.chr10 102719538 0 - 106955855 C e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47139210 0 + 51301725 C e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60010298 3 + 64156825 I a score=54493.000000 s hg38.chr19_GL949747v2_alt 142700 212 + 729520 gaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaaagttagctgggcgtggtggcgggcgcctgtaatcccagcaacttgggaggctgaggcaggagaatcgcttgaaaccggaaggcggaggttgcagtgagccgagattgcgccactacactctagcctgggcaataagagcaaaactccgtctcaaaaaaaaa s panTro4.chr19 59077077 212 + 63644993 gaccagcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaaagttagctgggcgtggtggcgggcgcctgtaatcccagcaacttgggaggctgaggcaggagaatcgcttgaaaccggaaggcggaggtcgcagtgagccgagattgcgccactatactctagcctgggcaataagagcaaaactccgtctcaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55953449 211 + 60714840 gaccagtctgatcaacatggtgaaaccccctttttactaaaaatacaaaaaaattagctgggcgttgtggcgggcgcctataatcccagcaacttgggaggttgaggcaggagaatcgcttgaaaccgtaaggcagaggttacagtgagccgagattgtgccattgcactctag-ctgggcaataagagcaaaactccgtttcaaaaaaaaa i ponAbe2.chr19 I 225 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e calJac3.chr22 45423717 0 + 49145316 C e nomLeu3.chr10 102719538 0 - 106955855 C e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47139210 0 + 51301725 C e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60010298 3 + 64156825 I a score=130995.000000 s hg38.chr19_GL949747v2_alt 142912 79 + 729520 a-------agaCTGAGGATTCTTGGGGAGGGGGTTTCTGCCACCACCACTTGCT-CCCCCACCCCAACCCGTCCCGTCA-GGGGTCAG---- s panTro4.chr19 59077289 78 + 63644993 a--------gaCTGAGGATTCTTGGGGAGGGGGTTTCTGCCACCACCACTTGCT-CCCCCACCCCAACCCGTCCCGTCA-GGGGTCAG---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55953660 88 + 60714840 aaaagaaaagaCTGAGGATTCTTGGGGAGGCGGTTTCTGCCACCACCACTTGCTCCCCCCACCCCAACCCGTCCCGTCAGGGGGTCAG---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102719538 80 - 106955855 -------AAGACTGAGGATTCTTGGGGAGGGGGTTTCTGCCACCACTACTTGCT-CCCCCACCCCAACCCGTCCCGTCAGGGGGTCAG---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60010301 80 + 64156825 -------AAGACTGAGGATTCTTGGGGAGGGAGTTTCTGCCACCACCACTTGCT-TTCCTACCCCAACCCGTCCCGTCACGGGGTCAG---- i rheMac3.chr19 I 3 C 0 s papAnu2.chr19 47139210 80 + 51301725 -------AAGACTGAGGATTCTTGGGGAGGGAGTTTCTGCCACCACCACTTGCT-TCCCTACCCCAACCCGTCCCGTCACGGGGTCAG---- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45423717 76 + 49145316 -------AAGGCTGAGGATTCCTGGGGAGGGAGTTT-TGCCAGCACCACTTGCT-CCC---CCCCCACCCGTTCTTTCAGGGAGTCAG---- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19633662 71 - 122678785 -------AGGACTCTGGATTCTTGGGGACTGGTCCTCTACCACCACCACTC-CT-TCCCCACGACACC------------AGGGTGGGGATG i canFam3.chr1 I 4004 C 0 e mm10.chr7 3672309 2258 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=599252.000000 s hg38.chr19_GL949747v2_alt 142991 257 + 729520 GGGTGCAGGTGCCACTGACCGATGCAGGATGAGCAGGAGGCAGATGAGGCCAACGGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGCGTGGGCGGGGCGGGTAGAAGCCATAGAAGAGAGGGGACCATTCCAGGTAACCCTGTG-GGGGGA-AGGCGGCGCAGGGGCCACTGTGGGA------GGAGGCGGGGCTCCTGGAGCTGCACAGTCAGGGTCTGGGGTCAGGGTTTGAGGTTCGTGTCATTGAAGGCACTGGGGTCA s panTro4.chr19 59077367 256 + 63644993 GGGTGCAGGTGCCACTGACCGATGCAGGATGAGCAGGAGGCAGATGAGGCCAACGGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGCGTGGGCGGGGCGGGTAGAAGCCATAGAAGAGAGGGGACCATTCCAGGTAACCCTGTG-GGGG-A-AGGCGGCGCAGGGGCCACTGTGGGA------GGAGGCGGGGCTCCTGGAGCTGCACAGTCAGGGTCTGGGGTCAGGGTTTGAGGTTCCTGTCATTGAAGGCACTGGGTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55953748 257 + 60714840 GGGTGCAGGTGCCACTGACCGATGCAGGATGAGCAGGAGGCAGATGAGGCCAACGGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGCGTGGGCGGGGCGGGTAGAAACCATAAAAGAGAGGGGACCATTCCAGGTAACCCTGTT-GGGGGA-AGGCGACGCAGGGGCCACTGTGGGA------GGAGGCGGGGCTCCTGGAGCTGCACAGTCAGGGTCTGGGGTCAGGGTTTGAAGTTCGTGTCACTGACGGCACTGGGCTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102719618 257 - 106955855 GGGTGCAGGTGCCACTGACCGACGCAGGATGAGCAGGAGGCAGATGAGGCCAACGGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGCGTGGGCGGGGCGGGTAGAAGCCATAGAAGAGAGGGGACCATTCCAGGTAACCCTGTG-GGGGGA-AGGCGGTGCAGGGGCCACTGTGGGA------GGAGGAGGGGCTCCTGGAGCTGCACAGTCAGGGTCCGGGGTCAGGGTTTGAGGTTCGTGTCATTGAAGGCACTGGGCTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60010381 258 + 64156825 GGGTGCAGGTGCCACTGACCGATGCAGGATGAGCAAGAGGCAGATGAGGCCGACGGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGCGTGGGCGGGGCGGGTAGAAGCCATAGAAGAGAGGGGACCATTCCAGGTAACCCTGTGGGGGGGA-AGGCGGCGCGGGGGCCACTGTGGGA------GGAGGCGGGGCTCCTGGAGCTGCACAGTCAGGGTCTGGGGTCAGGGTTTGAGGTTCGTGTCATTGAAGGCACTGGGCTCA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47139290 258 + 51301725 GGGTGCAGGTGCCACTGACCGATGCAGGATGAGCAAGAGGCAGATGAGGCCAACGGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGCGTGGGCGGGGCGGGTAGAAGCCATAGAAGAGAGGGGACCATTCCAGGTAACCCTGTGTGGGGGA-AGGCGGCGCAGGGGCCACTGTGGGA------GGAGGCGGGGCTCCTGGAGCTGCACAGTCAGGGTCTGGGGTCAGGGTTTGAGGTTCGTGTCATTGAAGGCACTGGGCTCA i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45423793 254 + 49145316 GGGTGCAGGTGCCACTGACCGATGCAGGATGAACAGGAGGCAGATGAGGCCAACAGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGTGTGGGCGGGGCGGGTAGAAGCCATAGAACAGAGGAGACCATTCCAAGTAACCCTGTG-GGGGGA-AGGTGG-GTCGGGGCCACTGTGGGA------GGAGGCAGGGCTCCTGGCGATGCATAATCAGGGTCTGGGGTCAGGGTTTGAGGGGCGTGT--TTGAAAGCACAGGGTTCA i calJac3.chr22 C 0 I 342 s mm10.chr7 3674567 244 + 145441459 GGATGTGGGCATCACTAACCGTCGTAGGATGCACAGCAAGTAGATGATGCTGATGGCAAAGACGGAGCACAGGTAGGTGATGGCCAGGTTCGATCGGGGTGGGTAGAACCCATAGAATAGAGGGGACCACTCAAGGTAACCCTGGG-GAGGAAGAGGCAGAACAAAGGTCATAGTGGGGCCGGGTGGAGGTAACGATCAGGGAGCTGAGTGATCTGTGTGTG--------------------TGTCGTCCAGGAAACCAGGCTTC i mm10.chr7 I 2258 I 1 s canFam3.chr1 19633733 201 - 122678785 GGGTGCGGTTGTTACTTACCGATGGAGGATGAGCAGCAGATACAGGAGGCCAATGACAAAGACAGAGCACAGATAGGTGACTGCCAGGTGTGCGCGGGGTGGGTAGAACCCATAGAAGAGGGGAGACCATTCTAGAAAACCCTGCA-GAGGAA-AAGT----------TCACCGTGGGC------TTAGG-------------------CAATCAGAATCGGGGGGTA----CTGAGGCTCG----------------------- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=12211.000000 s hg38.chr19_GL949747v2_alt 143248 9 + 729520 CAGGTGGGC s panTro4.chr19 59077623 9 + 63644993 CAGGTGGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55954005 9 + 60714840 CAGGCGGGC i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 102719875 9 - 106955855 CAGGTGGGC i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 60010639 9 + 64156825 CAGGTGGGC i rheMac3.chr19 C 0 I 1 s papAnu2.chr19 47139548 9 + 51301725 CAGGTGGGC i papAnu2.chr19 C 0 I 1 s mm10.chr7 3674812 8 + 145441459 AAAGTAAG- i mm10.chr7 I 1 C 0 s canFam3.chr1 19633934 6 - 122678785 ---GTGGGG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45424047 342 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=827427.000000 s hg38.chr19_GL949747v2_alt 143257 298 + 729520 GGGGAATCCCCCAGGGACCCAGGCACCTACCTCACCCGAGAGCAAGTTGAAGAGCTGGGTGGCAAAGGTGACCAGGCCCTGGGAGTGGGGGTTATAGGAGCCGCAGGGCGAGGAGATGTCGGGGCCGGGAGGGCCTGGGGGAGCGCCTCCCAACCAGGTGGGCAGCAGCGTCATGCAGGCCATGAGCACAGAGGCCAGCACGTTAAGAAGGAGCAGGAAGCGCAGCAGGGAGAAGTAGGACTCCGTGCCGGCGCCAAACTGGCCTGCAGGGGGCAGC----AGAGAGAGGCTCAGGTTCCTT s panTro4.chr19 59077632 298 + 63644993 GGGGAATCCCCCAGGGACCCAGGCACCTACCTCTCCCGAGAGCAAGTTGAAGAGCTGGGTGGCAAAGGTGACCAGGCCCTGGGAGTGGGGGTTATAGAAGCCGCAGGGCGAGGAGATGTTGGGGCCGGGAGGGCCTGGGGGAGCGCCTCCCAACCAGGTGGGCAGCAGAGTCATGCAGGCCATGAGCACAGAGGCCAGCACGTTGAGAAGGAGCAGGAAGCGCAGCAGGGAGAAGTAGGACTCCGTGCCGGCGCCAAACTGGCCTGCAGGGGGCAGC----AGACAGAGGCTCAGGTTCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55954015 298 + 60714840 GGGGAATCTCCCAGGGACCCAGGCACCTACCTCTCCCGAGAGCAAGTTGAAGAGCTGGGTGGCAAAGGTGACCAGGCCCTGGGAGTGGGGGTTATAGGAGCCGCAGGGCGAGGAGATGTTGGGGCCGGGAGGGCCTGGGGGAGCGCCTCCCAACCAGGTGGGCAGCAGCGTCATGCAGGCCATAAGCACAGAGGCCAGCACGTTGAGAAGGAGCAGGAAGCGCAGCAGGGAGAAGTAGGACTCCGTGCCGGCGCCAAACTGGCCTGCAGGGGGCAGC----AGAGAGAGGCTCAGGTTCCTT i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 102719885 298 - 106955855 GGGGAATCTCCCAGGGACCCAGGCACCTACTTCTCCCGACAGCAAGTTGAAGAGCTGGGTGGCAAAGGTGACCAGGCCCTGGGAGTGGGGGTTATAGGGGCCGCAGGGCGAGGAGATCTCGAGGCCGCGAGGGCCTGGGGGAGCGCCTCCCAACCAGGTGGGCAGCAGCGTCATGCAGGCCATAAGCACAAACGCCAGCACGTTGAGAAGGAGCAGGAAGCGCAGCAGGGAGAAGTAGGACTCCGTGCCGGCGCCAAACTGGCCTGCAGGGGGCAGC----AGAGAGAGGCTCAGGTTCTTT i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 60010649 302 + 64156825 GGGGAAACTCCCAGGGCCCCAGGCACCTACTTCTCCTGAGAGCAAGTTGAAGAGCTGGGTGGCAAAGGTGACCAGGCCCTGGGGGTGGGGGTTATAGGAGCCGCAGGGCGAGGAGGTGTTGGAGCCCGGAGGGCCTGGGGGAGCGCCTCCCAGCCAGGTGGGCAGCAGCGTCATGCAGGCCATAAGCACAGAGGCCAGCACGTTGAGGAGGAGTAGGAAGCGCAGCAGGGAGAAGTAGGACTCGGTGCCGGCGCCAAACTGGCCTGCAGGGGGCAGCAGAGAGAGAGAGGCTCAGTTTCCTT i rheMac3.chr19 I 1 C 0 s papAnu2.chr19 47139558 298 + 51301725 GGGGAAACTCCCAGGGCCCCAGGCACCTACTTCTCCTGAGAGCAAGTTGAAGAGCTGGGTGGCAAAGGTGACCaggccctgggggtgggggttatAGGAGCCACAGGGCGAGGAGGTGTTGGAGCCGGGAGGGCCTGGGGGAGCGCCTCCCAGCCAGGTGGGCAGCAGCGTCATACAGGCCATAAGCACAGAGGCCAGCACGTTGAGGAGGAGCAGGAAGCGCAGCAGGGAGAAGTAGGACTCGGTGCCGGCGCCAAACTGGCCTGcagggggcagc----agagagaggCTCAGGTTCCTT i papAnu2.chr19 I 1 C 0 s calJac3.chr22 45424389 298 + 49145316 GAGAAATCTCCCAGGGACCCAGGCACCTACTTCTCCCGAGAGCAAGTTGAAGAGCTGGGTGTCGAAGGAGACCAGGCCCTCGGAGTGGGGATTATAGAAGCCGCAGGGCGAGGAGGTGTTGAGGCCGGGAGGGCCTGGGGGAGCGCCTTCCAGCCAGGTGGGCAGCAGCGTCATGCAGGCCATGAGCACCGAGGCCAGCACGTTGAGGAGCAGCAGGAAGCGCAGCAGAGAGAAGTAGGACTCGGCGCCGGCGCCAAACTGACCTGCAGGGGGCAGC----AGAGAGAGGCTCAGGTTCCTT i calJac3.chr22 I 342 C 0 s mm10.chr7 3674820 296 + 145441459 -GAGGTTCCTCTGGGGACCATGGCACCCACCTCTCCAGAGAGCAAGTTGAAAAGCTGGGTGGGGAAGGCGACCAGGCCATGAGTGTGTGGAATATAGGAACCACAGGGTGAAGAGATGTTAGGGCCAGGGGGACCTGGAGGAGCCCCTTCCAGCCAGGTGGGGATCAGCTTCATGCAGATTTCAATGACAGATGCCACCAGGTTGAGAAAGAGCAGGAAGCGCAGCAGGGAGAAGTAGGACTCAGTGCCTGCTCCAAACTGACCTGCAGAGGGCAGC----AGAGAG-GCCTCAGGTCCCTT i mm10.chr7 C 0 C 0 s canFam3.chr1 19633940 293 - 122678785 ---GGGTCTCCCAGGGCTCCAGGGACGCACCTCTCCTGACAGCAAGTTGAGGAGATGGGTGGGGAAGGTGACTAGGCCTTGGGGGCTGGGGTTGTAGAAGCCACAGGGCGAGGAGGTGTCAGAGCCAGGGGGACCCGGGAGGGTCCCTTCCAGCCAGGTGGGCAGCAGTGTCATACAGGCCTTAATTACAGACGCCAGCACGTTGAGAAGCAGCAGGAAACGCAGCAAGGAGAAGTAGGACTCGGTGCCGGCACCAAACTGGCCTACAGGGGGT-GC----AGAGAG-GCCTGGGGCTCCTG i canFam3.chr1 C 0 I 8 e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=30693.000000 s hg38.chr19_GL949747v2_alt 143555 20 + 729520 CCCGGGAGCAGGACCAGCCC s panTro4.chr19 59077930 20 + 63644993 CCCGGGAGCAGGACCAGCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55954313 19 + 60714840 CCCGGGAGCA-GACCAGCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720183 19 - 106955855 CCCGGGAGCA-GACCACCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60010951 20 + 64156825 CCCGGGAGCAGGACCAGCTC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47139856 20 + 51301725 CCCGGGAGCAGGGCCAGCTC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45424687 20 + 49145316 TCTGGGAGCAGGACCAGCCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3675116 19 + 145441459 ACCAGT-GTAGTTCCAACCC i mm10.chr7 C 0 I 114 e canFam3.chr1 19634233 8 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=58091.000000 s hg38.chr19_GL949747v2_alt 143575 45 + 729520 CTCCTACCCCTGGACT-GGGGTCCAGCCGCGCCTTCctttctttct s panTro4.chr19 59077950 45 + 63644993 CTCCCACCCCTGGACT-GGGGTCCAGCCGCGCCTTTCTTTCTTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55954332 45 + 60714840 CTCCCACCCCGGGACT-GGGGCCCAGCCGCGCctttctttctttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720202 42 - 106955855 CTCCCACCCCGGGACT-GGGGCCCAGCCGCGCCtttcttttct--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60010971 46 + 64156825 CTCCCATCCCGGCACTGGGGGCCCAGCCGTGCCTTGCTTTCTTTCt i rheMac3.chr19 C 0 I 34 s papAnu2.chr19 47139876 46 + 51301725 CTCCCATCCCGGCACTGGGGGCCCAGCCGTGCCttgctttctttct i papAnu2.chr19 C 0 I 1 s calJac3.chr22 45424707 45 + 49145316 CTCC-ACCCCGGGACTCGGGGCCCAGGGGCGCCGCCtttttctttt i calJac3.chr22 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=-131.000000 s hg38.chr19_GL949747v2_alt 143620 4 + 729520 -ttct s panTro4.chr19 59077995 4 + 63644993 -TTCt i panTro4.chr19 C 0 I 52 s ponAbe2.chr19 55954377 4 + 60714840 -ttct i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47139923 3 + 51301725 -ttt- i papAnu2.chr19 I 1 C 0 s calJac3.chr22 45424752 4 + 49145316 gttc- i calJac3.chr22 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e nomLeu3.chr10 102720244 0 - 106955855 C e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60011017 34 + 64156825 I a score=910.000000 s hg38.chr19_GL949747v2_alt 143624 1 + 729520 t s ponAbe2.chr19 55954381 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720244 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47139926 1 + 51301725 t i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45424756 1 + 49145316 t i calJac3.chr22 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60011017 34 + 64156825 I e panTro4.chr19 59077999 52 + 63644993 I a score=2629.000000 s hg38.chr19_GL949747v2_alt 143625 31 + 729520 ttctt--tcttttctttctttctttcttttctt- s ponAbe2.chr19 55954382 22 + 60714840 t--------ctttctttctttctttc---tctt- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720245 28 - 106955855 ttctt--tcttttctttttttctttt---ttct- i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45424757 31 + 49145316 ttatttattttttatttatttattta---ttttt i calJac3.chr22 C 0 I 1379 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47139927 0 + 51301725 C e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60011017 34 + 64156825 I e panTro4.chr19 59077999 52 + 63644993 I a score=16156.000000 s hg38.chr19_GL949747v2_alt 143656 201 + 729520 tctttctttttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttcttttctttctttctttctttctttcttcctttctttcttttctttccttccttccttccttccttccttccttccttccttccttccttccttccttcctttctttctctctctctctctctctatata s ponAbe2.chr19 55954404 137 + 60714840 tctttcttttcttttctttctttctttctttctttctttctttctttctttctttttttctttctttc------------------------------------------tttctttccttccttccttccttccttccttccttacttccttccttccttccttccttcctttctttc---------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720273 139 - 106955855 tttcttttttcttttcttttcttttcttttcttttcttttcttttcttttcctctcctctcccctttcgt----------------------------------------ttcctttcctttccttttctttttctTTCT----------------------Ctctctctctctctttctatatatatatatatacatata i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47139927 0 + 51301725 C e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60011017 34 + 64156825 I e panTro4.chr19 59077999 52 + 63644993 I a score=-3610.000000 s hg38.chr19_GL949747v2_alt 143857 33 + 729520 tatatatatatatttttcttttcttttcttttc-- s ponAbe2.chr19 55954541 16 + 60714840 --------------tttctt---tttttttttt-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720412 13 - 106955855 tatatatatatat---------------------- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47139927 25 + 51301725 ----------tattattattattgttatttgttat i papAnu2.chr19 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60011017 34 + 64156825 I e panTro4.chr19 59077999 52 + 63644993 I a score=2768.000000 s hg38.chr19_GL949747v2_alt 143890 8 + 729520 tttttttt- s panTro4.chr19 59078051 8 + 63644993 tttttttt- i panTro4.chr19 I 52 C 0 s ponAbe2.chr19 55954557 8 + 60714840 tttttttt- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720425 8 - 106955855 tttttttt- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47139952 5 + 51301725 ----tatta i papAnu2.chr19 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60011017 34 + 64156825 I a score=203010.000000 s hg38.chr19_GL949747v2_alt 143898 166 + 729520 tttttgagacggagtttcgctctgccgcccagcatggagtgcagtggcgcgatctcggctcactgcaacctccgcctcctgggttcaagcaattctcctgtctcagcctcacgagtagctgggattacaggcgtgcgccaccatgctcagctagtttttgtatttt s panTro4.chr19 59078059 166 + 63644993 tttttgagacggagtttcgctctgccgcccagcatggagtgcagtggcgcgatctcggctcactgcaacctccgcctcctgggttcaagcaattctcctgtctcagcctcacgagtagctgggattacaggcatgcgccaccatgctcagctggtttttgtatttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55954565 166 + 60714840 tttttgaaacggaatctcgctctgccgcccagcatggagtgcagtggcgcgatctcggctcactgcaacctctgcctcctgggttcaagcaattctcctgtctcagcctcgcgagtagctgggactacaggcgtgggccaccatgcccagctagtttttgtatttt i ponAbe2.chr19 C 0 M 804 s nomLeu3.chr10 102720433 166 - 106955855 tttttgagacggagtttcgctctgctgcccagcatggagtgcagcggcatgatcttggctcactgcaacctccgccttctgggttcaagcaattttcctgtctcagcctcccaagtagctgggattacaggcgtgcgccaccatgctcagctagtttttgtatttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60011051 165 + 64156825 tttttgagacggagtctctctctgccgcccaggccggagtgcagtggcgtgatctcggctcactgcaaccttcgcctcccaggttcaagcaattcaccgatctcag-ctcccgagtagctgggattacaggcatgcgccaccatgctcagttagttttcgcatttt i rheMac3.chr19 I 34 C 0 s papAnu2.chr19 47139957 162 + 51301725 tttttgagacggagtctcgctctgccgcccaggccggagtgcagtggcgcgatctcagctcactgcaaccttcgcctcctgggttcaagcaattctcctatctcagcctcccgagtagctgggattacaggcacgcgccaccatgctc----agtttttgtatttt i papAnu2.chr19 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=92837.000000 s hg38.chr19_GL949747v2_alt 144064 130 + 729520 tggtagagacgggggtttcaccatgttggtcaggctggtctcgaattcttgac-----------------ctcaggtgatccacccacctcggcctcccaaactgttgggattacaggcgtgagccaccgcgccaggcccagccgtg s panTro4.chr19 59078225 130 + 63644993 tagtagagacgggggtttcaccatgttggtcaggctggtctcgaattcttgac-----------------ctcaggtgatccacccacctcggcctcccaaactgttgggattacaggcgtgagccaccgcgcccggcccagccgtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102720599 130 - 106955855 tagtagagacgaggatttcaccatgttggtcaggctggtctcgaactcctgac-----------------ctcgggtgatccactcacctcggcctcccaaattgttgggattacaggtgtgagccaccgcgcccggcTCAGCGGTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60011216 124 + 64156825 tagtagagacg-gggtttcaccatattggtcaggctggcctcgaactcctgatnnnnnnnnnnnnnnnnn----------------------gcctcccaaactgttgggattacaggcgtgagccgccgcgcccggcccagccgtg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47140119 129 + 51301725 tagtagagatg-gggtttcaccatattggtcaggctggcctcgaactcctgat-----------------ctccggtgatccacccacctaggcctcccaaactgttgggattacagacgtgagccgccgCGCGCGGCCCAGCCGTG i papAnu2.chr19 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=44845.000000 s hg38.chr19_GL949747v2_alt 144194 54 + 729520 cctttctcagaccc--aagagtccagacccccagcccctc----------------------------ctccctcagacccaaa s panTro4.chr19 59078355 54 + 63644993 cctttctcagaccc--aagagtccagacccccagcccctc----------------------------ctccctcagacccaga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102720729 54 - 106955855 CCTTTCTCAGACCC--AAGagtccagacccccagcccctc----------------------------ctccctcatacccaga i nomLeu3.chr10 C 0 I 273 s rheMac3.chr19 60011340 82 + 64156825 cctttctcagaccc--aagagtccaggccctgagcccctcctccttcagacccagatcccagtcccttctccctcagatccagA i rheMac3.chr19 C 0 I 56 s papAnu2.chr19 47140248 54 + 51301725 CCTTTCTCAGACCC--AAGAGTCCAGGCCCCGAGCCcgtc----------------------------ctccctcagacccaga i papAnu2.chr19 C 0 I 64 s mm10.chr7 3675249 53 + 145441459 CTTCTCTCTGATTCAGAAGGGTTCAGGCACTAG--TCTTC----------------------------ATCCTTCAGACCAGG- i mm10.chr7 I 114 C 0 e canFam3.chr1 19634233 8 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=2928.000000 s hg38.chr19_GL949747v2_alt 144248 8 + 729520 aatccagg s rheMac3.chr19 60011478 8 + 64156825 aatccagg i rheMac3.chr19 I 56 C 0 s papAnu2.chr19 47140366 8 + 51301725 aatccagg i papAnu2.chr19 I 64 C 0 s mm10.chr7 3675302 8 + 145441459 GCTGCAGG i mm10.chr7 C 0 C 0 e canFam3.chr1 19634233 8 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e nomLeu3.chr10 102720783 273 - 106955855 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e panTro4.chr19 59078409 0 + 63644993 C a score=6146.000000 s hg38.chr19_GL949747v2_alt 144256 13 + 729520 cccaagcc---cctcc s nomLeu3.chr10 102721056 13 - 106955855 tcccagcc---cctcc i nomLeu3.chr10 I 273 C 0 s rheMac3.chr19 60011486 13 + 64156825 cccaagcc---cctcc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47140374 13 + 51301725 cccaagcc---cctcc i papAnu2.chr19 C 0 C 0 s mm10.chr7 3675310 12 + 145441459 ----AACCAGACCTTT i mm10.chr7 C 0 C 0 e canFam3.chr1 19634233 8 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e panTro4.chr19 59078409 0 + 63644993 C a score=487538.000000 s hg38.chr19_GL949747v2_alt 144269 412 + 729520 tccctcaaacccaggagtcc---gtccccagcccctcctccctcagacccaggag-------tccaggccctgccccCAGGACAC--CACCCAAACCCCACCGCACCCCCGATCCTCTTCAGTGTCCACGCCCAGGGCTGCAGGCTTCGCAAGCCTTCCTTTGTTTTCTCCTTGGACCTCCGAAGTAGCCGCGCCCATCGGTCCGTCTTAGTTCCAGAGCCATAGACCACCTGGTCCCTGCTGGCATTTCTTTGCCTGGGAGGGAAAC------AGG--------CAGAAAATGAGGGGTTTCGCagccccagactgggaaccatctgaatgtagacacaatccaacagtagaatggagaagtaaattgtggcc---tatacataagatagaatactctgtagcaataaaaaagaaACC-------Agct----gg-gt-----acagtggctcaggc s panTro4.chr19 59078409 390 + 63644993 -------------------------tcccagcccctcctccctcagacccaggAG-------TCCAGGCCCTGCCCCCAGGACAC--CACCCAAACCCCACCGCACCCCCGATCCTCTTCAGTGTCCACGCCCAGGGCTGCAGGCTTCGCAAGCCTTCCTTTGTTTTCTCCTTGGACCTCCGAAGTAGCCGCGCCCATTGGTCCGTCTTAGTTCCAGAGCCATAGACCACCTGGTCCCTGCTGGCATTTCTTTGCCTGGGAGGGAAAC------AGG--------CAGAAAATGAGGGGTTTCGCagccccagactgggaaccatctgaatgtagacacaatccaacagtagaatggagaagtaaattgtggcc---tatacataagatagaatactctgtagcaataaaaaagaaACC-------Agct----gg-gt-----acagtggctcaggc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102721069 412 - 106955855 tccctcagacccaggagtct---gtccccagcccctcctccctcagacccaggag-------tccaggccctgccccCAGGACAC--CACCCGAACCCCACCGCACCCCCGATCCTCTTCAGTGTCCACGCCCAGGGCTGCAGGCTTCGAAAGCCTTCCTTTGTTTTCTCCTTGGATCTCCGAAGTAGCCGCACCCATTGGTCCGTCCTAGTTCTAGAGCCATAGACCACCTGGTCCCTGCTGGCATTTCTTTGCCTGGGAGGGAAAC------AGG--------CAGAAAATGAGGGGTTTCGCagccccagactgggaaccatctgaatgtagaaacaacccaacagtagaatggagaagtaaattgtagcc---tatacataagatagaatactctgtagcaataaaaaataaacC-------ggct----gg-gt-----acagtggctcaatc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60011499 413 + 64156825 cccctcagacccagaagtct---gtccccagcccctcctccctcagacccaggag-------tccaggccctgccccCAGCACAT--CACCCGAACCCCACCGCACCCCCGATCCTCTTCAGTGTCCATGACCAGGGCTGCAGGCTTTGCAAGCCTTCCTTTGTTTTCTCCTTGGACCTCCGAAGTAGCCGCGCCCATTGGTCCGTCCTAGTTCCAGAGCCATAGATCACCTGGTCC---CTGGCATTTCTTTGCCTGGGAGGGAAAG------AGG--------CAGAAAATGAGGGGTTTTGCagccccagactgggaaccatccgaatgtagaaacaacccaaaagtagaacggagaagtaaattgtggcc---tatacataagatagaatactctgtggcaataaaaaagaaACC-------AGTTggccgg-gc-----gcggtggctcacgc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47140387 409 + 51301725 tccctcagacccagaagtct---gtccccagcccctcctccctcagacccaggag-------tccaggccctgcCCCCAGGACAT--CACCCGAACCCCACCGTACCCCCGATCCTCTTCAGTGTCCATGACCAGGGCTGCAGGCTTTGCAAGCcttcctttgttttctccttGGACCTCCGAAGTAGCCGCGCCCATTGGTCCGTCCTAGTTCCAGAGCCATAGATCACCTGGTCC---CTGGCATTTCTTTGCCTGGGAGGGAAAG------AGG--------CAGAAGATGAGGGGTTTTGCAGCCCCAGACTGGGAACCATCCGAatgtagaaacaacccaaaagcAGAACGGAGAAGTAAATTGTGGCC---TATACATAAGATGGAATACTCTgtggcaataaaaaagaaacc-------agtt----ga-gt-----gcggtggctcacgc i papAnu2.chr19 C 0 C 0 s mm10.chr7 3675322 438 + 145441459 TCCCAAAGGCCCAGGGGATA---ATTGCCACTCCCCTCTCTGTCAGACCCAGGAAACCACACTCCAGCCTCAGACCCCAGGCCTCTTCCTCTAAAGCCCAGCACACCCCCAATTTTCTTCAGCGTCCATGCCCAGGGCTGTATAGTTTGAAAGCCTTCTTTCATTTTTCCCTTGGTCCGGGAAAGCTGTCGGGTCCAGTAGGCAGCCCTGGATTCAGAGCCAGAAGCCAGCTGCCCT---GTAGCCTGGCTCTTCCTAGAAAGAGAGC------AGAGTCAGCGTCAGAAAATGAAGGGTTTGGAACctacaaactgggaaccacccaaagacagaaacaacacga---tgtaacgaggacaggcatcgtggtactgtatccataaactggaatactctttagcaattaaaaaggaaCCAAATCTGagct----gg-gtggtgggggggggggcacac i mm10.chr7 C 0 C 0 s canFam3.chr1 19634241 401 - 122678785 TCCCTCAGACCTGGGAGTCCTGATTCCCCAGCCCCTCCTCCCTCAGACCCAGGAA-------T----------------GGGGCC--AGCCTCAACCCCACCGCACCCCCAATTCTCTTCAGTGTCCACGCCCAGGGTTGCAAGGTGTGCAGGCCTTCCTTCGTCTTCTCCTTCATCCTCCGGAACTTCAGGGCGCAATTTGAGGCTCTGGAACCCGATCCCTGAGCCACTTGGTCC---CTGGTATGGCTCTTCCTGGTAGGGAAACATTCAGAGA--------CAGAATAGGAAGGACCTGGCAGCTCCC-AGTGGACACC-CCCAAGTGGAGAAACAACACAACAGCAGGAGCGGGAAGTAAATTGCAATA---TATCGATAACTCGGAATCCTCTACAGCAATAGGAAGAGACAC-------AGCT----AATGC-----ATAGAAGGCCAGGC i canFam3.chr1 I 8 I 1202 e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=159092.000000 s hg38.chr19_GL949747v2_alt 144681 186 + 729520 ctgtaatcccagcactttgggaggccgaggtgggtgaatcacctgaggtcag---------------gagttcgagaccagcctgaccaacatggtgaaatcctgtctct----actaaaaataccaaaaaaaaaaaaaaa------------------------------------------------t----tagctgggcctggtgg------------cgggtgcctgtaatcccagctacacgagaggctgaggcaggaaaatt s panTro4.chr19 59078799 187 + 63644993 ctgtaatcccagcactttgggaggccgaggtgggtgaatcacctgaggtcag---------------gagttcgagaccagcctgaccaacatggtgaaatcctgtctct----actaaaaataccaaaaaaaaaaaaaaa-----------------------------------------------at----tagctgggcctggtgg------------cgggtgcctgtaatcccagctacacgagaggctgaggcaggaaaatt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102721481 234 - 106955855 ctgtaatcccagcactttgggaggctgaggtgggtgaatcacctgaggtcag---------------gagttcgagaccagcctgaccaaaatggtgaaatcctgtctct----actaaaaataccaaaaaaaaaaaaaaaaaaacaaaaaaaaagctgggcctggtggcgggtgcctgtaatcccaaaa----aagctgggcctggtgg------------cgggtgcctgtaatcccagctacacgggaggctgaggcaagagaatc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60011912 177 + 64156825 ctgtaatccgagcactttcggaggccaaggtgggcggatcatctgaggccag---------------gggttcgagaccagcctgaccaacatggtgaaatcctccctc-------------tacaaaaaaaaaaaaaaat------------------------------------------------g----taactgggcctggtgg------------tggtcgcctgtaatcccagctactggggaggctgaggcaggaggatc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47140796 190 + 51301725 ctgtaatcccagcactttgggaggccaaggtgggtggatcatctgaggtcag---------------gggttcgagaccagcctgaccaacatggtgaaatcctgcctct----actaaaaatacaaaaaaaaaaaaaaat------------------------------------------------atatttagctgggcctggtgg------------tgggcgcctgtaatcccagctactggggaggctgaggcaggagaatc i papAnu2.chr19 C 0 C 0 s mm10.chr7 3675760 233 + 145441459 ctttaatcccagcac-ttgggaggcagatgcaggtggatt-tctgaggccagcctggtctacagactgagttccaatacagccagagctacacagaaaaaccctgtctcgaaaaaccaaaaAAAAAAAAAAAAAAAAAAAGGAGCCAGACATAAAATAATGAT--------------------------G----GAGCCATGTCTAGTAGTATATgcatgcttgtatgcttgtaatcccaac----agtgaggttgaggcagtggaatt i mm10.chr7 C 0 C 0 e canFam3.chr1 19634642 1202 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=2100.000000 s hg38.chr19_GL949747v2_alt 144867 1 + 729520 g s panTro4.chr19 59078986 1 + 63644993 g i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102721715 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60012089 1 + 64156825 g i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47140986 1 + 51301725 g i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844317 1 + 50890351 g i chlSab2.chr6 I 58 C 0 s mm10.chr7 3675993 1 + 145441459 g i mm10.chr7 C 0 I 558 e canFam3.chr1 19634642 1202 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e macFas5.chr19 55029692 9250 + 59248254 I a score=309972.000000 s hg38.chr19_GL949747v2_alt 144868 279 + 729520 cttgaacctgggaggtggaggttgcagtgagctgagatggcgccattgcattccagcctgggtgacggagtgagattccaagaaaggaaagaaagaaagaaaagaaagaaacctaatgctaggcagaagaagccagcacaaaagactgaagactgtatgattctatttgcacaacgttgcagagcac--agcttgcaaagctctacagaaaAGcaggaggctggagtgggaggatcgcttgagcccaggtgtcggaggctgcagtgagctgagactgcacc s panTro4.chr19 59078987 279 + 63644993 cttgaacctgggaggcggaggttgcagtgagctgagatggcgccattgcattccagcctgggtgacggagtgagattccaagaaaggaaagaaagaaagaaaagaaagaaacctaatgctaggcagaagaagccagcacaaaagactgaagactgtatgattctatttgcacaaagttgcagagcac--agcttgcaaagctctacagaaaAGcaggaggctggagtaggaggatcgcttgagcctaggtgtcggaggctgcagtgagctgagactgcacc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102721716 266 - 106955855 cttgaacctgggaggcggaggttgcagtgagctgagatggcgccattgcactccagcctgggtgacagagtgagattcc-------------aaggaagaaaagaaagaaaCCtaatgctaggcagaagatgccagcacaaaagactgaagactgtatgattctatttgcataaagttgcagagcac--agctagcaaagctctacagaaaAGcaggaggctggggtgggagaatcgcttgagcccaggtgtcggaggctgcagtgagctgagatcgcacc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60012090 278 + 64156825 cttgaacctgggagacagaggttgcagtgagctgagatggcaccattgcgctccagcctgggtgacagaatgagattccttctcagaaa---aaagaaagaaagaaggaaaCCTAATGTCAGGCAGAAGAAAACAGCAGAGAAGACTGAAGCCTGCATGATTCTATTTGTACAAAGTTGCAGAGCACAGAGCTGGCAAAGCTACACAGAAAAGcgggaggctggagtgggagaatcgcttgagcccaggtgtcggaggctgcagtgagctgagatcacacc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47140987 262 + 51301725 cttgaacctgggagacagaggttgcagtgagctgagattgcaccactgccctccagcctgggtgacagaatgagattccttctcag-aa---aaagaaagaaagaaggaaacctaatgccaggcagaag-aaacagcacaG-AGACTGAAGCCTGCATGATTCTATTTGTACAAAGTTGCAGAACACAGAGCTGGC-------------AAAGCAGGAGGCTGGagttggagaatcgcttgagcccaggtgtcagaggctgcagtgagctgagatcacacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844318 278 + 50890351 cttgaacctgggagacagaggttgcagtgagctaagatggcaccattgcactccagcctgggtgacagaatgagattccttctcagaaa---aaagaaagaaagaaggaaGCCTAATGCTAGGCAGAAGAAAACAGCACAGAAGACTGAAGCCTGCATGATTCTATTTGTACAAAGTTGCAGAGCACAGAGCTGGCAAAGCTACACAGAAAAGcgggaggctggagtgggagaatcgcttgagcccaggtgttggaggctgcagtgagctgagatcacaca i chlSab2.chr6 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e macFas5.chr19 55029692 9250 + 59248254 I a score=46599.000000 s hg38.chr19_GL949747v2_alt 145147 23 + 729520 actgcactccagcctgggcatca s panTro4.chr19 59079266 23 + 63644993 actgcactccagcctgggcatca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55955535 23 + 60714840 actgcactccagcctgggcatca i ponAbe2.chr19 M 804 C 0 s nomLeu3.chr10 102721982 23 - 106955855 actgcactccagcctgggcatca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60012368 23 + 64156825 actgcactccagcctgggcatca i rheMac3.chr19 C 0 I 319 s papAnu2.chr19 47141249 23 + 51301725 actgcactccagcctgggcatca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844596 23 + 50890351 actgcactccagcctgggcatca i chlSab2.chr6 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e macFas5.chr19 55029692 9250 + 59248254 I a score=8024.000000 s hg38.chr19_GL949747v2_alt 145170 17 + 729520 gagcaagactctgtcaa s panTro4.chr19 59079289 17 + 63644993 gagtaagactctgtcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55955558 17 + 60714840 gagcaagactctgccaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102722005 4 - 106955855 gagc------------- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47141272 17 + 51301725 cagcgagactctgtctc i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46844619 17 + 50890351 cagcgagactctgtctc i chlSab2.chr6 C 0 I 1 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60012391 319 + 64156825 I a score=32557.000000 s hg38.chr19_GL949747v2_alt 145187 29 + 729520 aaaaaaaaaaaaaaa--------GGTTAGGGAGAAGA s panTro4.chr19 59079306 32 + 63644993 aaaaaaaaaaaaaaa-----aaaGGTTAGGGAGAAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55955575 37 + 60714840 aaaaaaaaaaaaaaaaaaaaaaaGGTTAGGGAGAAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102722009 19 - 106955855 ----------aaaaA--------GGTTAGGGAGAAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60012710 28 + 64156825 AAAAAAAAAAAAAAA--------GGTT-GGGGGAGAA i rheMac3.chr19 I 319 C 0 s papAnu2.chr19 47141290 28 + 51301725 aaaaaaaaaaaaaaa--------ggtt-gggggagAA i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46844637 28 + 50890351 aaaaaaaaaaaaaaa--------GGTT-GGGGGAGAA i chlSab2.chr6 I 1 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e macFas5.chr19 55029692 9250 + 59248254 I a score=611756.000000 s hg38.chr19_GL949747v2_alt 145216 318 + 729520 GGTTACCTTGTATTTGTGAGGAAAAAGGGGGTGTCAGGGGAGGGACGCACAGGGTGCTGTCATGCCGTGTCACTTGCCCTAGCTGGAGTTTATCTGGGCTCTCACTTTATGAATAcagccatccctcagtatccat-gggggttggttcaaggactccccaagaatactgaaatctgtagatgcccaaattccttatataaaacggtatagtatttgcatacaggctacacacatcctcctgt-gtTTGTTTTATT-TTATTTTAAttt-----ttatctgattttt-acagacaaatgtctcgttttgttgtccaggctggagtgc s panTro4.chr19 59079338 322 + 63644993 GGTTACCTTGTATTTGTGAGGAAAAAGGGGGTGTCAGGGGAGGGACGCACAGGGTGCTGTCATGCCGTGTCGCTTGCCCTAGCTGGAGTTTATCTGGGCTCTCACTTTATGGATAcagccgtccctcagtatccat-gggggttggttcaaggactccccaagaatactgaaatctgtagatgcccaaattccttatataaaatggta-agtatttgcgtacaggctatacacatcctcctgt-gtttgttttatt-ttattttattttattttTTATCTGAttttt-atagacaagtgtctcgttttgttgtccaggctggagtgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55955612 309 + 60714840 GGTTACCTTGTACTTGTGAGGAAAAAGCGGGTGTCAGGGGAGGGACACACAGGGTGCTGTCATGCTGTGTCGCTTGCCCTAGCTGGAGTTTATCTGGGCTCTCACTTTATGAATAcagccgtccctcagtatccat-gggggttggttcaaggactccccaagaatactgaaatatgtagatgcccaaatttcttatataaaacggtatagtatttgcatacaggctacacacatcctcctgt-Gtttattttatt-ttat-------------ttatctgattttt-atagac-agtgtctcattttgttgtccaggctggagtgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102722028 312 - 106955855 GGTTACCTTGTCCTTGTGAGGAGAAAGGGGGTGTCAGGGGAGGGACACACAGGGTGCTGTCATGCTGTGTCGCTTGCCCTAGCTGCAGTTTATCTGGGCTCTCACTTTATGAATAcagccgtccctcagtatccat-gggggttggttcaaggactccctaagaatactgaaatctgtagatgcccaaattccttatataaaacggtacactatatgcatacaggctacacacatcctcctgt-gtttattttaTT-TTAATTT----------TTATCTGATTTTT-ATAGAC-AGTGTCTCGTTTTGTTGTCCAGACTGGTATGC i nomLeu3.chr10 C 0 M 1089 s rheMac3.chr19 60012738 318 + 64156825 GGTTACCATCTCCTCGTGAGGAGAAAGGGGGTGTCAGGGGAGGGACGCACAGGGTGCTGTCATGCTGTGTCGCTTGCCCTAGCTGGAGTTTATCTGGGCTCTCACTTTATAAATAcagtcgtccctcagtatccat-gggagttggttcaaggactccccaaggataccgaaatctgta-atatccaaattctgtatataaaatggcatagtatttgcatacaggctacacatactcttctgtggttttttaaatt-ttattttatttt-----ttatctgatttttcagagac-agcgtctcgttttgttgtccaggctggagtgc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47141318 318 + 51301725 GGTTACCATCTCCTCGTGAGGAGAAAGGGGGTGTCAGGGGAGGGACGCACAGGGTGCTGTCATGCTGTGTCGcttgccctggctggagtttATCTGGGCTCTCACTTTATAAATACAGtcgtccctcagtatccat-gggggttGGTTCAAGGACTCCCCAAGGATACCGAAATCTGTA-ATGCCCaaattctgtatataaaatggcatagtatttgcatacaaGCTACACATATCCTTCTgtggtgttttaaatt-ttattttatttt-----ttatctgatttttcAGAGAC-AGCGTCttgttttgttgtccaggctggagtgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844665 318 + 50890351 GGTTACAATCTCCTCGTGAGGAGAAAGGGGGTATCAGGGGAGGGACGCACAGGGTGCTGTCATGCTGTATCGCTTGCCCTAGCTGGAGTTTATCTGGGCTTTCACTTTATAAATAcagttgtccctcagtatccat-gggggttggttcaaggactccccaaggatactgaaatctgta-atatccaaattctgtatataaaatggcatagtatttgcatacaggctacacatatccttctgtggttttttccatt-ttattttatttt-----ttatctgatttttcagagac-agcgtctcgttttggtgtccaggctggagtgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45426167 300 + 49145316 GGTTACCTTGTCCTTGTGAGGAT-GAGGGGACATCAGAGGATGGGCATGCAAGGTGCTGTCACGCCGTGT--CCTGCCCTAGCTGGAGTTTACCTGGGTTCTCATTTTATGAATGcacttgtacctcattatccatggggggttagttcacgatctccc-aagaatactgaaatctgta-atgcccaaattccttatgtaaaacagtacagtattggcatctgcaatacacacatcctcctgt-atTATTACCATTATTAT-------------TAGTAgtattttttaaagac-agggtttcatgatgttggtcaggct------- i calJac3.chr22 I 1379 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e macFas5.chr19 55029692 9250 + 59248254 I a score=154766.000000 s hg38.chr19_GL949747v2_alt 145534 110 + 729520 ggtggtgcaatcatagctcaatgcagcctcaaacttccaggctcaagcaattctcccgcctcagcctcccaaagcgctggggctacaggtatgggccacgacacccagcc s panTro4.chr19 59079660 110 + 63644993 agtggtgcaatcatagctcaatgcagcctcaaacttccaggctcaagcaattctcccgcctcagcctcccaaagcgctggggctacaggtatgggccactacacccagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55955921 110 + 60714840 agtggtgcaatcatagctcaatgcagcctcaaacttccaggctcaagcaattctcccgcctcagcctcccaaagcgctggggctacaggtatgggccactacactcagcc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60013056 110 + 64156825 agtggtgcagtcgtagctcaatgcagcctcaaatttctgggctccagcaattctcctgcctcagtctcccaaagtgctggggctacaggtgtgggccactacacccagag i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47141636 110 + 51301725 agtggtgcagtcatagctcaatgcagcctcaaatttccaggctccagcaattctcccgcctcagtctcccaaagtgctggggctacaggtgtgggccactacaCCCAGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844983 110 + 50890351 agtggtgcaatcatagctcaatgcagcctcaaatttccaggctccagcaattctcccgcctcagtctccccaagtgctggggctacaggtgtgggcccctacacccagcg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45426467 85 + 49145316 ---------------gct---------cttgagctctagacctcaggtgatccacccgccttggcct-ctaaagggcttggattacaggcgtgagccaccacgcccggtc i calJac3.chr22 C 0 I 949 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e nomLeu3.chr10 102722340 1089 - 106955855 M e macFas5.chr19 55029692 9250 + 59248254 I a score=131476.000000 s hg38.chr19_GL949747v2_alt 145644 111 + 729520 ctccaatgcactttaaatcacctctagattacttataacacccggtacaaggtaaatgttatatagatagctgttcttttaacttgtattatttTTTGTCATATTGTTACT s panTro4.chr19 59079770 111 + 63644993 ctccaatgcactttaaatcacctctagattacttataacaccttgtacaaggtaaatgttatatagatagctgttcttttaacttgtattatttTTTGTCATATTGTTACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55956031 111 + 60714840 ctccaatgcactttaaatcatctctagattacttataacaccttgtacaaggtaaacattatatagatagctgttcttttaacttgtattatttTTTGTCATATTGTTACT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60013166 108 + 64156825 ctccaatgcactttcaatcacctctagattacttacaatacctcatacaagat-aatgttatatagatagctgttCTTTTAatttgtat--ttttttgtcatattgttact i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47141746 108 + 51301725 CTCCAATGCACTTTcaatcacctctagattacttacaatacctcaTACAAGAT-AATGTTATATAGATAGCtgttcttttaatttgtat--ttttttgtcatattgttact i papAnu2.chr19 C 0 I 328 s chlSab2.chr6 46845093 109 + 50890351 ctccagtgcactttcaatcacctctagattacttacaatacctcatacaagataaatgttagatagatagctgttCTTTTAATTTGTAT--ttttttgtcatattgttact i chlSab2.chr6 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45426552 949 + 49145316 I e nomLeu3.chr10 102722340 1089 - 106955855 M e macFas5.chr19 55029692 9250 + 59248254 I a score=90.000000 s hg38.chr19_GL949747v2_alt 145755 1 + 729520 T s panTro4.chr19 59079881 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55956142 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60013274 1 + 64156825 t i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 46845202 1 + 50890351 t i chlSab2.chr6 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45426552 949 + 49145316 I e nomLeu3.chr10 102722340 1089 - 106955855 M e papAnu2.chr19 47141854 328 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I a score=1365.000000 s hg38.chr19_GL949747v2_alt 145756 1 + 729520 T s panTro4.chr19 59079882 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55956143 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60013275 1 + 64156825 t i rheMac3.chr19 C 0 I 486 s papAnu2.chr19 47142182 1 + 51301725 t i papAnu2.chr19 I 328 C 0 s chlSab2.chr6 46845203 1 + 50890351 t i chlSab2.chr6 C 0 I 489 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45426552 949 + 49145316 I e nomLeu3.chr10 102722340 1089 - 106955855 M e macFas5.chr19 55029692 9250 + 59248254 I a score=57492.000000 s hg38.chr19_GL949747v2_alt 145757 119 + 729520 GATTATTACTTTTAAAAAATagagatgggggtctcgctatgttactcaggccgcagtatagtggctatattcacaggcatgatcccactactgatcggcgtgggagtgttgaTACATTG s panTro4.chr19 59079883 119 + 63644993 GATTATTACTTTTAAAAAATagagatgggggtctcgctatgttactcaggctgcagtatagtggctatattcacaggcatgaacccgctactgatcagcatgggagtgttgaTACATTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55956144 119 + 60714840 GATTATTACTTTTAAAAAATagagatgggggtcttgctatgttgctcaggctgcagtatagtggctatattcgcaggcatgatcccgctactgatcggcacgggagtgttgaTATATTG i ponAbe2.chr19 C 0 M 1290 s papAnu2.chr19 47142183 118 + 51301725 gattattacttttaaaagatacagat-ggggtctcgatatgttgctcaggctggagtatagtggctatATTCACAGGCACGATCCCGCCACTGATCAGCAGGGGAGTGGTGatatattg i papAnu2.chr19 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45426552 949 + 49145316 I e nomLeu3.chr10 102722340 1089 - 106955855 M e chlSab2.chr6 46845204 489 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60013276 486 + 64156825 I a score=7143.000000 s hg38.chr19_GL949747v2_alt 145876 120 + 729520 TTATTTTTTATTGTTTTTT-Ccatatatatacacatatatataca--------------tatatatgtgtatatatatacacacatatgcatatatatacgcatatatgcgtatatatatacgcgtatatacgcg s panTro4.chr19 59080002 135 + 63644993 TTATTTTTTATTGTTTTTTTCcatatgtatacacatatatatacacacatatatatgtatatatatgtgtgtgtatatacacatatatgtgtatatatacgtatatatgcatatatatacacgtatatatgtgtg i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47142301 37 + 51301725 ttgttttttattgtttttt-ccatatatatac---------------------------tatata---------------------------------------------------------------------- i papAnu2.chr19 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e ponAbe2.chr19 55956263 1290 + 60714840 M e calJac3.chr22 45426552 949 + 49145316 I e nomLeu3.chr10 102722340 1089 - 106955855 M e chlSab2.chr6 46845204 489 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60013276 486 + 64156825 I a score=7816.000000 s hg38.chr19_GL949747v2_alt 145996 10 + 729520 tatatatata s panTro4.chr19 59080137 10 + 63644993 tatatatata i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60013762 10 + 64156825 TATAtttata i rheMac3.chr19 I 486 C 0 s papAnu2.chr19 47142338 10 + 51301725 tatatttata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46845693 10 + 50890351 tatatttata i chlSab2.chr6 I 489 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e ponAbe2.chr19 55956263 1290 + 60714840 M e calJac3.chr22 45426552 949 + 49145316 I e nomLeu3.chr10 102722340 1089 - 106955855 M e macFas5.chr19 55029692 9250 + 59248254 I a score=337548.000000 s hg38.chr19_GL949747v2_alt 146006 290 + 729520 tttgagatggagtcccgctctatcacccaggccggagtccaatggcacgatcttggctcactgcaacctctatctccctggttcaagcgattctcctgcttcagcctcccgagtagctgggattacaggcacccgccaccacacccagctaatg--tttgtatttttagtagagttggggttttgccatgttggccaggctggtcttgaactcctgaccacaggtgatccactcgcctgggcctcccaaagtgctgggattacaggtgtgagccactgcAATGGGCCCAtaa s panTro4.chr19 59080147 290 + 63644993 tttgagatggagtcccgctctatcacccaggccggagtgcaatggcacgatcttggttcactgcaacctctatctccctggttcaagcgattctcctgcttcagcctcccgagtagctgggattacaggcacccgccaccacacccagctaatg--tttgtatttttagtagagttggggtttcgccatgttggccaggctggtctcgacctcctgaccacaggtgatccactcgcctgggcctcccaaagtgctgggattacaggtgtgagccactgcaacgggccCAtaa i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60013772 290 + 64156825 tttgagatggagtcccgctctatcacccaggctggagtgcaatggcacgatattggctcactgcaacctgcatctctgtggttcaagcaattctcctgcctcagcctaccgagtagctgggattacaggcacatgccaccacacccagctaatt--tttgtatttttagtagagttggggtttcgccatgttggccaggctggtctcgaactcctgacctcaggtgatccactcgcctcggcctcctaaagtgctgggattacaggtgtgagccaccgcgccgggccCACaa i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47142348 290 + 51301725 tttgagatggagtcccgctctatcacccaggctggagtgcaatggcacgatattggctcactgcaacctgtatcTCTgtggttaaagcaattctcctgcctcagcctcccgagtagctgggattacaggcacatgccaccacacccagctaatt--tttgtatttttagtagagttggggtttcgccatgttggccaggctggtctcgaactcctgacctcaggtgatccactcgcctcggcctcctaaagtgctgggattacaggtgtgagccactgcgccgggcccaCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46845703 290 + 50890351 tttgagatggagtcccgctctatcacccaggctggagtgcaatggcacgatctcggctcactgtgacctgtatgtccgtggttcaagccattctcctgcctcagcctcccgagtagctgggattacaggcacatgctaccacatgcagctaatt--tttgtatttttagtagagttggggtttcgccatgttcgccaggctggtctcgaactcctgacctcaggtgatccattcgcctcggcctcctaaagtgctgggattacaggtgtgagccaccgcgctgggccCACaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45427501 292 + 49145316 ttagagacagagtctaattttgttgcctaggctggagtgcaatggagcaatctctgctcactgtgacctccgcctcccaggttcaagggattctccttcctcagcctcccgagtagctgggactacaggtgtgcgccaccacacccggctaatttatttgtatttttagcagagaaggagtttcaccatgttagccaggatgggctcgagctcctgagctcaggtgatccacttgccttgccctcccaaagtgctaacattgcaggcaggagccaccgcgccaggccCATAA i calJac3.chr22 I 949 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e ponAbe2.chr19 55956263 1290 + 60714840 M e nomLeu3.chr10 102722340 1089 - 106955855 M e macFas5.chr19 55029692 9250 + 59248254 I a score=216340.000000 s hg38.chr19_GL949747v2_alt 146296 199 + 729520 tcatttttgaaggagggcacctgcattttcattgttcaccaggccctgcaaattatgcagTGAGAATGGGAAAAGAAAGAAGTTAAAGAGAGGGAGGCTTGGAAGAGGAGGCAAAGATGAAGGAAGGTATAAAGCAGAGAGAAATAAATATTA-ACAGATTTTGgacacacacacagagagaaactgag--gcagagacagG s panTro4.chr19 59080437 199 + 63644993 tcatttttgaaggagggcacctgcattttcattgttcaccaggccctgcaaattatgcagTGAGAATGGGAAAAGAAAGAAGTTAAAGAGAGGGAGGCTTGGAAGAGGAGGCAAAGATGAAGGAAGGTATAAAGCAGAGAGAAATAAATATTA-ACAGATTTTGGACACACACACACAGAGAAACTGAG--GCAGAGACAGG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60014062 193 + 64156825 tcatttttgaaggagggcacctgcattttcattgttcaccaggccctgcgaattatACCGTGAGAATGGGAAAAGAAAGAAGTTAAAGAGAGGGAGGCTTTGAAGAGGAGGCAAAGATGAAGGAAGACGTAAAGCAGAG------AAATATTA-ACAGATTTTGG--ACACACACAGAGAAAAACTGAGAGGCAGAGACAGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47142638 197 + 51301725 TCATTTTTGAAGGAGGGCACCTGCATTTTCATTGTTCACCAGGCCCTGCGAATTATACCGTGagaatgggaaaagaaagaagttaaagtGAGGGAGGCTTTGAAGAGGAGGCAAAGATGAAGGAAGACATAAagcagagagaaataaatatta-acagattttgg----acacacagagaaaaactgagaggcagagacagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46845993 199 + 50890351 tcatttttgaaggagggcacctgcattttcattgttcaccgggccctgcgaattatACCGTGAGAATGGGAAAAGAAAGAAGTTAAAGAGAGGGAGGCTTTGAAGAGGAGGCAAAGATGAAGGAAGACATAAAGCAGAGAGAAATAAATATTA-ACAGATTTTGG--ACACATGCAGAGAAAAACTGAGAAGCAGAGACAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45427793 173 + 49145316 TCATTTTTGAATGAGGACACCTGCATTCTCATTGTTCACCAGGTGCTGCAAAGCAGGCAGTGGG--------------------AAAGAGAGAGCGGCTTTGAAGAAGTGGGGAAGGTGAAGG----CATAAAGCAGAGACAAATAAATA--A-GCAGATTTCAG--ACATGCACAGGGAGAAACTGAGAAGCAGAGGCAGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19635844 158 - 122678785 TCAGTCTTGCCGGAGCTGTCCAGAATGTTCGTTGTTCAGCA-GCCGTGCACATCTTGT----AGCCCGGGAAGGGAAAGAAG--GAAGAGGGACAAACTTCGGAAAACA---------GAAGG-----CCACAACAG--------AAACACTACACAGATTCCAG------GCACAGGGAGAAG--GAG--CCAGAG----- i canFam3.chr1 I 1202 C 0 e mm10.chr7 3675994 558 + 145441459 I e ponAbe2.chr19 55956263 1290 + 60714840 M e nomLeu3.chr10 102722340 1089 - 106955855 M e macFas5.chr19 55029692 9250 + 59248254 I a score=399714.000000 s hg38.chr19_GL949747v2_alt 146495 242 + 729520 ATTGGTGGAGACCAGGGAGACGG----CAAATCCCAGAGA----GAAGAGA-CCCCAGAGCCA-----TCGAAAGGCAGCACTCACCTGGAGTC--CGAAGTAGAGACAAAGATGAGGGGAAGAAAGAAACCAAGAGAGGCAGCTCTGAGCGGGGCAGAGAGAGGCCCCAGAAGCCAGGAGCGGCAGAGGACAGAGGGAGGAGACCGAGTCCAGGGTATGGGAGAAGGGCCCGGTCCGGGCTGTGCGGGTCCCAGCTG s panTro4.chr19 59080636 242 + 63644993 ATTGGTGGAGACCAGGGAGATGG----CAAATCCCAGAGA----GAAGAGA-CCCCAGAGCCA-----CCGAAAGGCAGCACTCACCTGGAGTC--CGAAGTAGAGACAAAGATGAGGGGAAGAAAGAAACCAAGAGAGGCAGCTCTGAGCGGGGCAGAGAGAGGCCCCAGAAGCCAGGAGCGGCAGAGGACAGAGGGAGGAGACCGAGTCCAAGGTATGGGAGAAGGGCCCGGTCCGGGCTGTGCGGGTCCCAGCGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102723443 242 - 106955855 ATTGGTGGAGACCAGGGAGACGG----CAAATCCCAGAGA----GAAGGGA-CCCCAGAGCCA-----CCGAAAGGCAGCACTCACCTGGAGTC--CGAAGTAGAGACAAAGATGAGGAGAAAAAAGAAACCAAGAGAGGCAGCTCTGAGCGGGGCAGAGAGAGGCCCCAGAAGCCAGGAGCAGCAGAGGACAGAGGGAGGAGACTGTGTCCAAGGTATGGGAGAAGGGCCCAGTCCGGGCTGTGCGGGTCCCAGCTG i nomLeu3.chr10 M 1089 C 0 s rheMac3.chr19 60014255 244 + 64156825 ATTGGAGGAGACCAGGGAGATGG----CGAATCCCAGAGACAGGGAAGAGA-TCCCGGAGCCA-----CGGAAAGGCAGCACTCACCTGGAGTC--CGAAGGAGAGACAAAGAC--GGGAAAAAAAGAAACCAAGAGAGGCAGCTCTGAGTGAGGCAGAGAGAGGCCCCAGCAGCCAGGAGCGGCAGAGGACAGAGGGAGGAGACCGCGTCCAAGGTATGGGAGAAGCGCCTGGTCCAGGCTGTGCGGGTCCCAGCCG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47142835 246 + 51301725 attgGAGGAGACCAGGGGGACGG----CGAATcccagagacagagaagaga-tcCCGGAGCCA-----CGGAAAGGCAGCACTCACCTGGAGTC--CGAAGGAGAGACAAAGacgaggggaaaaaagaaaccaagagagGCAGCTCTGAGCGAGGCAGAGAGAGGCCCCAGCAGCCAGGAGCGGCAGAGGACAGACGGAGGAGACCGCGTCCAAGGTATGGGAGAAGGGCCCGGTCCAGGCTGTGCGGGTCCCAGCCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46846192 245 + 50890351 ATTGGAGGAGACCAGGGAGACGG----CGAATCCCAGAGACAGCGAAGAGA-TCCCAGAGCCA-----CGGAAAGGCAGCACTCACCTGGAGTC--CGAAGGAGAGACAAAGAC-AGGGGAAAAAAGAAACCAAGAGAGGCAGCTCTGAGCGAAGCAGAGAGAGGCCCCAGAAGCCAGAAGCGGCAGAGGACAGAGGGAGGAGACCTCGTCCAAGGTATGGGAGAAGGGCCCGGTCCAGGCTGTGCAGGTCCCAGCCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45427966 241 + 49145316 ACTGGA-GAGACATGGGTGACAG----TGAATCCCAGAGA----GAGAGGA-CCCCAGAGTCA-----CCGAAAGGAAGTACTCATTCGGAATC--TGAAGCAGAGACAAAGATGAGGGGAAGAAAGAAACCAAGAGGGGCAGCTCTGTCCGGGGCAGACAGAGGCCCCAGAAACCAGGAGCCGCAGAGAACAGAGGGAAGAGACAGGGTCCGAGGTGTGGGAGAAGCGCACAACCTGGGCTGGATGGGTCCCAGCGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19636002 166 - 122678785 ------------CAGAGAGCCAGCACACGAACCCGGGCGA----CAGGAGAGTTCTGGAGCCAGGAGCCAGGGAGGCAGGAGGC-CTgggagtcagagaagcagagacacaggcacagggaaagaagg---caagagaagca-----gggagaggctgagggagg-----------------aggagaggACACACGCTGG--------------------------------------------------CAAGCCG i canFam3.chr1 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e ponAbe2.chr19 55956263 1290 + 60714840 M e macFas5.chr19 55029692 9250 + 59248254 I a score=329303.000000 s hg38.chr19_GL949747v2_alt 146737 126 + 729520 GAGGTGGGGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCTGTCTGGGTGACTTCTGTGAAGGCCTTTctgctccttcctccat---cc s panTro4.chr19 59080878 126 + 63644993 GAGGTGGAGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCCGTCTGGGTGACTTCTGTGAAGGCCTTTCTGCTCCTTCCTCCAT---CC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102723685 126 - 106955855 GAGGTGGGGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCTGTCTGGGTGACTTCTGTGAAGGCCTTTctgctccttcctccat---cc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60014499 126 + 64156825 GAGGTGGGGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCCGCCTGGGTGACTTCGGTGAAGGCCTTTCTGCTCCTTCCTCCAG---CC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47143081 129 + 51301725 TAGGTGGGGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCCGTCTGGGTGACTTCTGTGAAGGCCTTTCTGctccttcctccagcctcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46846437 129 + 50890351 GAGGTGGGGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCCGTCTGGGTGACTTCTGTGAAGGCTTTTctgctccttcctccagcctcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45428207 126 + 49145316 GAGGTGGCGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCTGTCTGGGTGGCTTCTGCAAAGGCCTGCCTGCTCCTTCCTCCAT---CC i calJac3.chr22 C 0 M 1419 s mm10.chr7 3676552 113 + 145441459 GAGGTG----CTCACCTGTGTGCCCGCCTTGCCTGCATAGGCCAGGGAAGTTCCCGGGAAGGGTGAG---------ATTCCATTTGTGCAGTTTCTGCAAAGGCCTGAAGGCTCCTTCCTCCTT---CA i mm10.chr7 I 558 C 0 s canFam3.chr1 19636168 125 - 122678785 -GAGCGGAGCCTCACCTGTGTGTCCGGCGGGCCTGCATGGGCCATGGCAGCTCCCGGGAGGGGACGGGCTCCTCCAGCTCCTGCTGGGCGGCTTCTGCCATGGTCTGGAGTCTCCTCTCTCCAT---CT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55956263 1290 + 60714840 M e macFas5.chr19 55029692 9250 + 59248254 I a score=272175.000000 s hg38.chr19_GL949747v2_alt 146863 127 + 729520 tcctcctcctcct---ccAGCGCCCCCCAAGGCAGCACCCCAGGGTCTCGGTACCGAAGGGTGGCAGCACTGGGCAGCTCGTTCAGCACAGAAGACAGCGATGGGCCTGGGGAGGA-GCAG--GGGGCTGGGA s panTro4.chr19 59081004 127 + 63644993 TCCTCCTCCTCCT---CCAGCGCCCCCCAAGGCAGCACCCCAGGGCCTCGGTACCGAAGGGTGGCAGCACTGGGCAGCTCGTTCAGCACAGAGGACAGCGATGGGCCTGGGGAGGG-GCAG--GGGGCTGGGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102723811 130 - 106955855 tcctcctcctcctccgccAGCGCCCCCCAAGGCAGCACCCCAGGGCCTCGGTACCGAAGGGTGGCAGCACTCGGCAGCTCGTTCAGCACAGAGGACAGCGATGGGCCTGGGGAGGG-GCAG--GGGGCTGGGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60014625 127 + 64156825 TCCTCCTCCTCCT---CCGGCACCCCCCAAGGCAGCACCCCAGGGCCTCGGTACCGAAGGGTGGCAGCACTGGGCAGCTCGTTCAGCACAGAGGATAGCGATGGGCCTGGGGAGGG-GCAG--GGGGCTGGGA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47143210 127 + 51301725 tcctcctcctcct---ccggcACCCCCCAAGGCAGCACCCCAGGGCCTCGGTACCGAAGGGTGGCAGCACTGGGCAGCTCGTTCAGCACAGAGGACAGCGAtgggcctggggaggg-gcag--ggggctGGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46846566 127 + 50890351 tcctcctcctcct---ccGGCACCCCCCAAGGCAGCACCCCAGGGCCTCGGTACCGAAGGGTGGCAGCACTGGGCAGCTCGTTCAGCACAGAGGTCAGCGATGGGCCTGGGGAGGG-GCAG--GGGGCTGGGA i chlSab2.chr6 C 0 C 0 s mm10.chr7 3676665 127 + 145441459 TCATCATCTTCAT---CCAGTGTTCCCCAAGGGAGCACACCAGGGCCGCGGTATCGCAGCGTAGCAGCGCTGGGGAGATCGTTCAGCACAGACGCCAGCGATGGGCCTGGGATGAACACAA--AGGATTGAA- i mm10.chr7 C 0 C 0 s canFam3.chr1 19636293 129 - 122678785 TCTTCCTCCTCCT---CCGATGCCCCCCACGGAAGAACCCCAGGGCCCCGGTACCGAAGGGTTGCAGCACTGGGGAGCTCATTCAGCACAGAGGAGAGCGATGGGCCTGGGGTGGA-AAAGAAGGGGCTGGGA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55956263 1290 + 60714840 M e calJac3.chr22 45428333 1419 + 49145316 M e macFas5.chr19 55029692 9250 + 59248254 I a score=112897.000000 s hg38.chr19_GL949747v2_alt 146990 63 + 729520 ----------------------------agacccgggagtctggg-ccctaattcctcctccctcaga-ccaggaaaccagg-tccccggcccc s panTro4.chr19 59081131 63 + 63644993 ----------------------------agacccgggagtctggg-cccaaattcctcctccctcaga-ccaggaaaccagg-cccccggcccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102723941 56 - 106955855 ----------------------------agacctgggagtctggg-cccaaattcctcctccctcaga-ccaggaaaccagg-cccc------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60014752 62 + 64156825 ----------------------------agacccgggagtctggg-cccaaattcctcctccctcaga-ccaggaaaccagg-cctcag-tccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55038942 65 + 59248254 ----------------------------agacccaggagtccaggcccccagcccctcctccctcagacccaggagtccagacccccag-cccc i macFas5.chr19 I 9250 C 0 s papAnu2.chr19 47143337 63 + 51301725 ----------------------------AGACCTGGGAGTCTGGG-CCCAaattcctcctccctcaga-ctaGGAAACCAGG-CCTcagtcccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46846693 63 + 50890351 ----------------------------AGACCCGGGAGTCTGGG-cccaaattcctcctccctcaga-ccaggaaaccagg-cctcagtcccc i chlSab2.chr6 C 0 C 0 s mm10.chr7 3676792 58 + 145441459 ----------------------------AGACAGAGGAGTCCAGG-CCACAAGCCTTTC-CCCTCAGA-TCCACAGTCCAGG-CCACAGC---- i mm10.chr7 C 0 C 0 s canFam3.chr1 19636422 89 - 122678785 GGGCGCGGGAGTCCCAGCCTCCTCCCTCAGACC-AGGAGCCCAGG-CCCCTGCTCCTCCTCCCTCAGA-CCAGGAGCCCAGG-CCCCTGCTCC- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55956263 1290 + 60714840 M e calJac3.chr22 45428333 1419 + 49145316 M a score=117337.000000 s hg38.chr19_GL949747v2_alt 147053 52 + 729520 tcctccctcagacccaggagtccaggcccccggc----tcctcctccctcagaccc s panTro4.chr19 59081194 52 + 63644993 tcctccctcagacccaggagtctaggcccccgac----ccctcctccctcagaccc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60014814 51 + 64156825 tcctccctcagacccaggagtccaggcctccag-----ccctcctccctcagaccc i rheMac3.chr19 C 0 I 637 s macFas5.chr19 55039007 52 + 59248254 tcctccctcagacccaggagtccagacccccagc----ccctcctccctcagaccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47143400 55 + 51301725 tcctccctcagacccaggagtccaggcc-ccagcccttccctcttccctcagaccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46846756 52 + 50890351 tcctccctcagacccaggagtccaggcccccggc----ccctcctccctcggaccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45429752 51 + 49145316 tcctccctcaga-ccagaaaaccaggccccaggc----ccctcctccctcggaccc i calJac3.chr22 M 1419 C 0 s mm10.chr7 3676850 50 + 145441459 CCATCTCTCAGACACAAGGGTGCAGGGTTCAGGC------CACCTCCCTCAGACCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19636511 49 - 122678785 TCCTCCCTCAGA-CCAGGAGTCCAGGCC-CCTGC----TCCTCCTCCCTCAGACC- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55956263 1290 + 60714840 M e nomLeu3.chr10 102723997 0 - 106955855 C a score=89712.000000 s hg38.chr19_GL949747v2_alt 147105 42 + 729520 aggagtccaggcccccggctcctcctccctcagacccaggag s panTro4.chr19 59081246 42 + 63644993 agaagtccaggctctcggcccctcctccctcagacccagcag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102723997 27 - 106955855 ---------------cggcccctcctccctcagacccaggag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55039059 41 + 59248254 aggagtccagg-ccccggcccctcctccctcagacccaggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47143455 41 + 51301725 aggagtccaga-ccccagcccctcctccctcagacccaggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46846808 42 + 50890351 aggagtccaggcccccggcccctcctccctcggacccaggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45429803 41 + 49145316 aggagtccagg-ccccagcccctcctctctcggacccaggag i calJac3.chr22 C 0 C 0 s mm10.chr7 3676900 38 + 145441459 -TGGAGCCAGG-CCCCAG--ACTCTTTTTTCAGACCCAGGAG i mm10.chr7 C 0 C 0 s canFam3.chr1 19636560 41 - 122678785 AGGACTCCAGG-CCCCTGCTCCTCCTCCCTCAGACCCAGGAG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55956263 1290 + 60714840 M e rheMac3.chr19 60014865 637 + 64156825 I a score=14022.000000 s hg38.chr19_GL949747v2_alt 147147 15 + 729520 tccaggcccccggct s panTro4.chr19 59081288 15 + 63644993 aacaggcccccggcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102724024 15 - 106955855 tccaggcccccggcc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55039100 15 + 59248254 tccagatccccagac i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46846850 15 + 50890351 tccaggcccccggcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45429844 14 + 49145316 tccaggccccagcc- i calJac3.chr22 C 0 C 0 s mm10.chr7 3676938 12 + 145441459 CCCATGCCCCAA--- i mm10.chr7 C 0 C 0 s canFam3.chr1 19636601 14 - 122678785 TCCAGGCCCCTGCT- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55956263 1290 + 60714840 M e papAnu2.chr19 47143496 0 + 51301725 C e rheMac3.chr19 60014865 637 + 64156825 I a score=73582.000000 s hg38.chr19_GL949747v2_alt 147162 28 + 729520 cctcctccctcagacccaggagaacagg s panTro4.chr19 59081303 28 + 63644993 cctcctccctcagacccagaagtccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55957553 27 + 60714840 cctcctccctcaga-ccaggaaaccagg i ponAbe2.chr19 M 1290 C 0 s nomLeu3.chr10 102724039 28 - 106955855 cctcctccctcagacccaggagtccagg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55039115 28 + 59248254 cctcctccctcagacccaggagtccagg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46846865 28 + 50890351 cctcctccctcggacccaggagtccagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45429858 28 + 49145316 cctcctccctcggacccaggagtccaga i calJac3.chr22 C 0 C 0 s mm10.chr7 3676950 25 + 145441459 ---CCTTCTTCAGATACAGGGGTCTAGG i mm10.chr7 C 0 C 0 s canFam3.chr1 19636615 28 - 122678785 CCTCCTCCCTCAGACCCAGGAGCCCAGG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47143496 0 + 51301725 C e rheMac3.chr19 60014865 637 + 64156825 I a score=40086.000000 s hg38.chr19_GL949747v2_alt 147190 14 + 729520 cccccggcccctcc s panTro4.chr19 59081331 14 + 63644993 ctctcggcccctcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55957580 14 + 60714840 ccccagagccctcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102724067 14 - 106955855 cccccggcccctcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60015502 14 + 64156825 cccccggcccctcc i rheMac3.chr19 I 637 C 0 s macFas5.chr19 55039143 14 + 59248254 cccccagcccctcc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46846893 14 + 50890351 cccccggcccctcc i chlSab2.chr6 C 0 I 1683 s calJac3.chr22 45429886 14 + 49145316 cccccggcccctcc i calJac3.chr22 C 0 C 0 s mm10.chr7 3676975 12 + 145441459 -CCCCAGCCCATT- i mm10.chr7 C 0 C 0 s canFam3.chr1 19636643 13 - 122678785 -CCCCTGCTCCTCC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47143496 0 + 51301725 C a score=414808.000000 s hg38.chr19_GL949747v2_alt 147204 151 + 729520 tccctcagacccaggagaacaggcccccggcccctcctccctcagacccaggagtccaggcccccgg-ctcctcctccctcagacccaggagaacaggcccccggcccctcctccctcagacccaggagtccaggcccccggctcctcctcc s panTro4.chr19 59081345 151 + 63644993 tccctgagacccagcagaacaggcccccggcccctcctccctcagacccagaagtccaggctctcgg-cccctcctccctcagacccagcagaacaggcccccggcccctcctccctcagacccaggagtccaggcccccggcccctcctcc i panTro4.chr19 C 0 I 478 s ponAbe2.chr19 55957594 150 + 60714840 tccctcagacccaggagtccaggcccccggcccctcctccctcagacccaggagtccaggcccccgg-cccctcctccctcagacccaggagtccaggccctcagctcctcctccctcagacccaggagtccagg-ccccagcccctccacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102724081 151 - 106955855 tccctcagacccatgagtccaggcccccggcccctcctccctcagacccaggagtccaggcccccggccccctcctccctcagacccaggagtccaggctcccggcccctcctccctcaga-ccaggaaaccaggttcccggcccctcctcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60015516 150 + 64156825 tccctcagacccaggagtccaggcccccggcccctcctccctcagacccaggagtccaggcccccgg-cccctcctccctcagacccaggagtccagt-ccccggcccctcctccctcagacccgggagtccaggtacccagcccctcctcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55039157 150 + 59248254 tccctcagacccaggagtccaggcccccagcccctcctccctcagacccaggagtccagatccccag-accctcctccctcagacccaggagtccagg-ccccggcccctcctccctcagacccgggagtccaggtacccagctcctcctcc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46848590 151 + 50890351 tccctcggccccaggagtccaggcccccggcccctcctccctcggacccaggagtccaggcccccgg-cccctcctccctcggacccaggagtccaggcccccggcccctcctccctcggacccaggagtccaggcccccggctcctcctcc i chlSab2.chr6 I 1683 C 0 s calJac3.chr22 45429900 146 + 49145316 tccctcagacccaggagttcagg--gacagcccctcctcccccagccccaggagtccagacccccgg-cccctcctccctcagacccaggagttcagg--cacagcccctcctccctgggacccaggagtccagg-ccccaggccctcctcc i calJac3.chr22 C 0 C 0 s mm10.chr7 3676987 106 + 145441459 TCTCTCAGACCCAGGGGTACAGGCCTAAAGCCA--CCCCCCTCAGACCCAGGAGTTCAGA--CTCGG-GTTCTC--CCCTCAGATCCAGGGCTATAGA--------------------------------------TCCCATTATTTCTCC- i mm10.chr7 C 0 C 0 s canFam3.chr1 19636656 144 - 122678785 TCCCTCAGA-CCAGGAGTCCAGGCCCCCAGCCCCTC--CCCTCAGACGCAGGAGTCCAGGCCCCTG--CTCCTCCTCCCTCAGACCCAGGAGTCCAGG-CCCCTGCTCCTCCTCCCTCAGA-CCAGGAGTCCAGG-CCCCTGCTCCTCCTCC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47143496 0 + 51301725 C a score=31645.000000 s hg38.chr19_GL949747v2_alt 147355 14 + 729520 ctcagacataggaa s panTro4.chr19 59081974 14 + 63644993 ctcagacataggaa i panTro4.chr19 I 478 C 0 s ponAbe2.chr19 55957744 14 + 60714840 ctcagacataggaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102724232 14 - 106955855 ctcagacccagtag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60015666 14 + 64156825 ctcagagccaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55039307 14 + 59248254 ctcagacccgggag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46848741 14 + 50890351 cttggacccaggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45430046 14 + 49145316 ctcagacccaggag i calJac3.chr22 C 0 C 0 s mm10.chr7 3677093 12 + 145441459 TTCACACTGGGG-- i mm10.chr7 C 0 C 0 s canFam3.chr1 19636800 14 - 122678785 CTCAGACCCAGGAG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47143496 0 + 51301725 C a score=35449.000000 s hg38.chr19_GL949747v2_alt 147369 15 + 729520 tccaggcacccagcc s panTro4.chr19 59081988 15 + 63644993 tccaggcacccagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55957758 15 + 60714840 tccaggcacgcagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102724246 14 - 106955855 tccagac-cccagcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60015680 15 + 64156825 tccaggtacccagct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55039321 15 + 59248254 tccaggtacccagct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47143496 14 + 51301725 tccaggc-ctcagcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46848755 14 + 50890351 tccaggc-cccggcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45430060 13 + 49145316 ttcagg--cacagcc i calJac3.chr22 C 0 C 0 s canFam3.chr1 19636814 15 - 122678785 CTCAGGCCCCCAGCC i canFam3.chr1 C 0 I 878 e mm10.chr7 3677105 0 + 145441459 C a score=6465713.000000 s hg38.chr19_GL949747v2_alt 147384 1864 + 729520 cctcctccctcaga-ccaggaaaccaggttcccagcccctcctccctcaggcccaggagtccgggtgccagcctctacttcccctggacccaggggtccacagccctcaactccatccccAAG-----------------CGTGGAACCCTCCTACTCCAGGGCAGTGGAGTCCAGGCTTCAACTTCCTTTTCCCTCTAGCTCAGGAGTGTGGGAACCCAGCCTCTCCTATTCCCAAGACACCCAAACTCCCA-------------------------------------GCCCTTAGCCCTCCCCTCC----TCCCAGACTAGCCTGGTTCTCCAGGCTCCTCCTCCTCAGACCCTGGAGTTCCAGCCTCCAGTTCCCTTCTCCCCCATAATATCAGGAAGTGGAACCTTCTCTCTTTAGCCCTC-AGACTCAGGAGGCCAGGCCTCCCCTTTCCTCCTCCAGCAGGACTCCCACCTAGCCTGAAGGTCGGATGGATCTGAGCTTCTCCTGGCATTC---CCTACCTCCTCTGGCCTCCCGGGGGGCCAGCCACCCCCTAGAGGAGCCCCAGGCTTCTGATTCCAAGGTCGGGTTTT-CTTCCATGGCCC-AGGCTGGGCT------GTCTCTAGTGGCCA-CCAGGCAGACACTGCCCCAGGTA----AGGGAGGGGCCAGGGGCAGGTGTGTACCTGGCCAGCAGGTGGCCCGG---AGGGAGTAAGGTACA---CTTCCTGTGGTTTCTCAGGGCCGCTGATGCGAAAGGTCTCCTGGGAGCTGAAGTCCCCGTGGTGCCCCG---GGCCTGACAGTTTGGTTCCTGG--GCTGGGCGGGGGGG---CTGTACCTCACCCT------------------------GGGACTTGGTGGA-CTAAGTCCTTCCCACCGTTTATCA-CC--CAGATACCTGCACGGACAGGATGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACACGGTGA-CCTGTCATAGGCCAAGCGATGAGAAGAGGGCGCCAGGAGCGCTGGG-GTCCCGAGGTGGCTCAGATGGAAGCCAT----GGGACGGCCGTCCCCAGGCCCGCGCACccgcacctcagtttcccctttgtgaaatgggaaGCTTATGCTTCCTTCCAAGTCTGCAATATTGGTGCGATGAGCTAAAAGTGGAGCGAAAGACACAAGGAAGAGG-------CTTCCCACTCCCAGGACCTGCCCCCAAGCT--CCGACCCCACATTGTGGATGCAAAGAAAGGGAATTTGCCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGTGCTCTCTGGATACCCAGAAGCTGGAGCAGGGGCCAGTGA---CTCTTGTCTGGA---CAATACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGCCTCTGGGC---------------AGAGGG------CAGGGAGGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGGGTATTT--AGCTGGGGAAGAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGGG--GAGGAGAC------------------------------AGCAGCCTGGTTCACAGAATTCCCGGG------------------A-----CCAGCTGGCAGAGGGAGCGTCGTGAC---AGCTTACTCCTCCCGGAGCTTCTCTGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCTAAAGCCAGCCCCAGCCCCAGGGCTGCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGGGTGTCGGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCGCGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGCCCCCGCAGGGCTGACTCCAGCCGGCCCTCGGCAGCCAGGCACAGCGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTCCT-GAGGAGG- s panTro4.chr19 59082003 1866 + 63644993 cctcctccctcaga-ccaggaaaccaggttcccagcccctcctccctcaggcccaggagtccgggtgccagcctctacttcccctggacccaggggtccacagccctcaactccgtccccAAG-----------------CGTGGAACCCTCCTACTCCAGGGCAGTGGAGTCCAGGCTTCAACTTCCTTTTCCCTCTAGCTCAGGAGTGTGGGAACCCAGCCTCTCCTATTCCCAAGACACCCAAACTCCCA-------------------------------------GCCCTTGGCCCTCCCCTCC----TCCCAGACTAGCCTGGTTCTCCAGGCTCCTCCTCCTCAGACCCTGGAGTTCCAGCCTCCAGTTCCCTTCTCCCCCATAATATCAGGAAGTGGAACCTTCTCTCTTTAGCCCTC-AGACTCAGGAGGCCAGGCCTCCCCTTTCCTCCTCCAGCAGGACTGCCACCTAGCCTGAAGGTCGGATGGATCTGAGCTTCTCCTGGCAT-C---CCTACCTCCTCTGGCCTCCTGGGGGGCCAGCCACCCCCTAGAGGAGCCCCAGGCTTCTGATTCCAAGGTTGGGTTTT-CTTCCATGGCCCCAGGCTGGGCT------GTCTCTAGTGGCCA-CCAGGCAGACACTGCCCCAGGTA----AGGGAGGGGCCAGGG-CAGGTGTGTACCTGGCCAGCAGGTGGCCCGG---AGGGAGTAAGGTACA---CTTCCTGTGGTTTCTCAGGGCCGCTGATGCGAAAGGTCTCCTGGGAGCTGAAGTCCCCGTGGTGCCCCG---GGCCTGACAGTTTGGTTCCTGG--GCTGGGCGGGGGGGGGGCTGTACCTCACCCT------------------------GGGACTTGGTGGA-CTAAGTCCTTCCCACCGTTTATCA-CC--CAGATACCTGCACGGACACAATGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACACGGTGA-CCTGTCATAGGCCAAGCGATGAGAAGAGGGCGCCAGGAGCGCTGGG-GCCCCGAGGTGGCTCAGATGGAAGCCAT----GGGACGGCCGTCCCCAGGCCCGCGCAtctgcacctcagtttcccctttgtgaaatgggaagcttatgcttccttccaagtctgcaatatcggtgcaatgagctaaaagtggagcgAAAGACACAAGGAAGAGG-------CTTCCCATTCCCAGGACCTGCCCCCAAGCT--CCGACCCCACATTGTGGATGCAAAGAAAGGGAATTTGCCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGTGCTCTCTGGATACCCAGAAGCTGGAGCAGGGGCCAGTGA---CTCTTGTCTGGA---CAATACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGCCTCTGGGC---------------AGAGGG------CAGGGAGGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGGGTATTT--AGCTGGGGAAGAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGCG--GAGGAGAC------------------------------AGCAGCCTGGTTCACAGAATTCCCGGG------------------A-----CCAGCTGGCAGAGGGAGCGTCGTGAC---AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCTAAAGCCAGCCCCAGCCCCAGGGCTGCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGTGTGTCTGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCACGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGCCCCCGCAGGGCTGACTCCAGCCGGCCCTCGGCAGCCAGGCACAGCGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTCCT-GAGGAGG- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55957773 1905 + 60714840 cctcctccctcaga-ccaggaaaccaggttcccagcccctcctccctcaggcccaggagtcccggtgccagcctctacttcccctggacccaggggtccacagccctcgactccgtccccAAG-----------------CGTGGAACCCTCCTACTCCAGGGCAGTGGAGTCCAGGCTTCAACTTCCTTTTCCCTCTAGCTCAGGAGTGTGGGAACTCAGCCTCTCCTATTCCCCAGACACCCAAACTCCCAGCCCTTAGCCCTCCCCTCCTCCCAGACTAAACTCCCAGCCCTTAGCCCTCCCCTCC----TCCCAGACTAGCCTGGTTCTCCAGGCCCCTCCTCCTCAGACCCTGGAGTTCCAGCCTCCAGTTCCCTTCTCCCCCATAATATCAGGAAGTGGAACCTTCTCTCTTTAGCCCTG-AGACTCAGGAGGCCGGGCCTCCCCTTTCCTCCTCCAGCAGGACTCCCACCTAGCTTGAAGATCGGATGGATCTGAGCTTCTCCTGACAT-C---CTTACCTCCTCTGGCCTCCCGGGGGGCCAGCCACCCCCTAGGGGAGCCCCAGGCTTCTGATTCCAAGGTCGGGTTTT-CTTCCATGGCCCCAGGCAGGGCT------GTCTCTAGTGGCTA-CCAGGCGGACACTGCCCCAGGTA----AGGGAGGGGCCGGGG-CAGGTGTGTACCTGGCCGACAGGTGGCCCGG---AGGGAGTAAGGTACG---CTTCCTGTGGTTTCTCAGGGCCTCTGATGCGAAAGGTCTCCTGGGAGCTGAAGTCCCCGTGCTGCCCTG---GGCCTAACAGTTTGGCTCCTGG--GCTGAGCGGGGCAGGGGCTGTACCTCACCCT------------------------GGGACTTCGTGGGCCTAAGTCCTTCCCGCCGTTTATCCTCC--CAGATACCTGCACGGACACGCCGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACATGGTGA-CCTGTCACAGGCCGAGCAATGAAAAGAGGGTGCCAGGAGCGCTGGG-GCCCCGAGGTGGCTCAGATGGAAGCCAT----GGGACAGCCGTCCCCAGGCCTGCGCATTCGCACCTCAGTTTCCCCTTTGTGAAATGGGAAGCTTATGCTTCCTTCCAAGTCTGCAATATTGGTGCGATGAGCTAAAAGTGGAGTGAAAGACACAAGGAAGAGG-------CTTCCCACTCCCAGGACCTGCCCCCAAGCT--CCAACCCCACATTGTGGATGCAAAGAAAGGGGATTTGCCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGTGCTCGCTGGATACCCAGAAGCTGGAGCAGGGGCCAGTGA---CTCTTGTCTGGA---CAATACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGCCCCTGGGC---------------AGAGGG------CAGGGAGGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGGGTATTT--AGCTGGGGAAGAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGGG--GAGGAGAC------------------------------AGCAACCTGGTTCACAGAATTCCCAGG------------------A-----CCAGCTGGCAGAGGGGGCGTCGTGAC---AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCTAAAGCCAGCCCCAGCCCCAGGGCTGCCAGAGCTAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGTGTGTCAGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCGCGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGTCTTCTGGCCCCCTGGGCTCAGCCGCCCCCGCAGGGCTGACTCCAGCCGGCTCTCAGCAGCCAGGCACAGCGGGATCGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCATGCCAGTAGGCGCTCAGCAGCATGGTCCAGGTGCTCCT-GAGGAGG- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102724260 1860 - 106955855 cctcctccctcagacccaggagtccaggcccctggcccctcctccctcaggcccaggagtctgggtgccagcctctacttcccctggacccaggG--TCACAGCCCTCGACTCTGTCCCCAAG-----------------CGTGGAACC--TCTACTCCAGGGCAGTGGAGT-CAGGCTTCAACTTCCTTTTCCCTCTAGCTCAGGAGTGTGGGAACCCAGCCTCTCCTATTCCCGAGACACCCAAACTCCCA-------------------------------------GCCCTTAGCCCTCCCCTCC----TCCCAGACTAGCCTGGTTCTCCAGGCTCCTCCTCCTGAGACCCTGGAGTTCCAGCCTGCAGTTCCCTTCTCCCCCATAATATCAGGAAGTGGAACCTTCTCTCTTCAGGCCTC-AGACTCAGGAGGCCAGGCCTCCCCTTTCCTCCTCCAGCAGGACTCCCACCTAGCCTGAAGGTCGGATGGATCTGAGCTTCTCCTGGCAT-C---CCTACCTCCTCTGGCCTCCTGGCGGGCCAGCCACCCCCTAGAGGAGCCCCAGGCTTCTGATTCCAAGGTCGGGTTTT-CTTCCATGGCCCCAGGCTGGGCT------GTCTCTAGTGGCCA-CCAGGCAGACACTGCCTCAGGTA----AGGGAGGGGCCGGGGACAGGTGTGTACCTGGCCAGCAGGTGGCCCGG---AGGGAGTAAGGTACA---CTTCCTGTGGTTTCTCAGGGCCGCTGATGCGAAAGGTCTCCTGGGAGCTGAAGTCCCCGTGGTGCCC-G---GGCCTGACCGTTTGGTTCCTGG--GCTGGGCTGGGGAG---CTGTACCTCACCCT------------------------GGGACTTCGTGGC-CTAAGTCCTTCCCGCCGTTTATCA-CC--CAGATACCTGCACAGACACGATGCCTTTGTGCAACACTTTATTGGGAAGGATTTACACATGGTGA-CCTGTCATAGGCCAAGCGATGAGAAGAGGGTGCCAGGAGCGTTGGG-GCCCCGAGGTGGCTCAGGTGGAAGCCAT----AGGACGGCCGTCCCCAGGCCCGCGCATCCGCACCT--GTTTCCCCTTTGTGAAATGGGAAGCTTATGCTTCCTTCCAAGTCTGCAATATCGTTGTGATGAGCTAAAAGTGGAGCGAAAACCACAAGGAAGAGG-------CTTCCCACTCCCAGGACCTGCCCCCAAGCT--CCGACCCCACATTGTGGATGCAGAGAAAGGGAA-TTGCCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGTGCTCTGTGGATAGCCAGAAGCTGGAGCAGTCGCCAGTGA-GGCTCTTGTCTGGA---CAATACTTTGATTTTGCAGGAGTGGA---------G---GT-------GGCCCCTGGGC---------------AGAAGG------CAGGGAGGACACCCCCGGGTCTGCTGC-AGTTGAAGGCAGGGTATTTAGAGCTGGGGAAGAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGGG--GAGGAGAC------------------------------AGCAGCCTGGTTCACAGAATTCCCGGG------------------A-----CTAGCTGGCAGAGGGAGCATCGTGAC---AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCCAAAGCCAGCCCCAGCCCCAGGGCTGCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGTGTGTCAGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCACGCATCTTCAGGAACCAGTGCAGCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGTCCCCGCAGGGCTGACTCCAGGCGGCCCTCAGCAGCCAGGCACAGCGGGATGGTCAGGAAGCTCAGGTAGTAGCCTGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTCCT-GGGGAGG- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60015695 1842 + 64156825 cctcctcccttgga-ccaggaaaccaggtccccagcccctcctccctcaggcccaggagtcggggtgccagtctctactttccctggacccaggggcccacagtcctcaactccatccccAGG-----------------CGCGGACCCCTCCTACTCCAGGGCAGAGGAGTCCAGTCCTCAACTTTCTTTTCCTTCTAGCTCAGAAGTGTGGGAACCCAGCCTCTCCTATTCCCAAGACACCCAAACTCCCA-------------------------------------GCCCTTAGCCATCCCCTCC----TTCCAGACTAGCCTGGTTCTCTAGGCTTCTCCTCCTCAGACC------------CCTTCAGTTCCTTTGTCCCCCATAATATCAGGAAGTGGAACCT--TCTCTTCAGCCCTC-AGACTCAGCAGGCCAGGCCTCCCCTT---TCCTCCAGCAGGACTCCCACCTAGCCTGAAGGTCGGATGGATCTGAGCTTCTCCTGGCAT-C---CCTACCTCCTCTGGCCTCCCGGGGGGCCAGCCACCCCCTGGAGGAGCCCCAGGCTTCTGATTCCAAGGTTGGGTTTT-CTTCCATGGCCCCAGGCTGGGCT------GTTTCTAGTGGCCA-CCAGGCAAACACTGCCCCAGGTA----AGGGAGGGGCCCGGGGCAGGTGTGTACCTGGCCAGTAGGTGGCCCGG---AGGGAGTAAGGTACA---CTTCCTGTAGTTTCTCAGGGCCGCTGATGCGAAAGGTGTCCTGGGAACTGAAGTCCCTCTGGTGCCCCA---GGCCTGACAGTTTGGTTCCTGG--GCTGGGCAG--------CTGTACCTCACCCC-------------------------GGACTTTGTGGC-CTAAGTCCTTCCTGCCGTTTATCA-CC--CAGATACCTGCACAGACACAATGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACGTGGTGA-CCTGTCATAGGCCAAGGGATGAGAAGAGGGTGCCAGGAGCGTTGGG-GCCCCGAGGTGGCTCAGATGGAAGCCAT----GGGACGGCCGTCCCCAGGCCCGCGCAtctgcacctcagtttcccctttgtgaaatgggaaacttatgcttccttccaagtctgcaatatcggtgccatgagctaaaagtggagcgAAAGACACAAGGAAGAAG-------CTTCCCATTCCCAGGACCTGCCCCCAAGCT--CTGACCCCACATTGTGGATGCAAAGAAAGGGAATTTGTCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGCGCTCTCTGGATACCCAGAAGCTGGAGCAGGGGCCCACGA-GACTCTTGTCCGGA---CAAAACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGTCCCTGGGC---------------GGAGGG------CAGGGAGGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGAGTATTT--AGCTGGGGAAAAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGGG--GAGGAGAC------------------------------AGCGGCCTGGTTCACAGAATTCCCGGG------------------A-----CCAGCTGGCAGAGGGAGCGTCACGG----AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCCAAAGCCAGCCCCAGCCCCAGGGCTGCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGCGTGTCGGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCGCGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGCCCCCGCAGGGCTGACTCCAGCCGGCCCTCGGCAGCCAGGCACAGAGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTCCT-GAGGAGG- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55039336 1842 + 59248254 cctcctccctcgga-ccaggaaaccaggtccccagcccctcctccctcaggcccaggagtcggggtgccagtctctactttccctggatccaggggcccacagtcctcaactccatccccAGG-----------------CGCGGACCCCTCCTACTCCAGGGCAGAGGAGTCCAGTCCTCAACTTTCTTTTCCTTCTAGCTCAGAAGTGTGGGAACCCAGCCTCTCCTATTCCCAAGACACCCAAACTCCCA-------------------------------------GCCCTTAGCCATCCCCTCC----TTCCAGACTAGCCTGGTTCTCTAGGCTTCTCCTCCTCAGACC------------CCTTCAGTTCCTTTTCCCCCCATAATATCAGGAAGTGGAACCT--TCTCTTCAGCCCTC-AGACTCAGCAGGCCAGGCGTCCCCTT---TCCTCCAGCAGGACTCCCACCTAGCCTGAAGGTCGGATGGATCTGAGCTTCTCCTGGCAT-C---CCTACCTCCTCTGGCCTCCCGGGGGGCCAGCCACCCCCTGGAGGAGCCCCAGGCTTCTGATTCCAAGGTTGGGTTTT-CTTCCATGGCCCCAGGCTGGGCT------GTTTCTAGTGGCCA-CCAGGCAAACACTGCCCCAGGTA----AGGGAGGGGCCCGGGGCAGGTGTGTACCTGGCCAGTAGGTGGCCCGG---AGGGAGTAAGGTACA---CTTCCTGTAGTTTCTCAGGGCCGCTGATGCGAAAGGTGTCCTGGGAACTGAAGTCCCTCTGGTGCCCCA---GGCCTGACAGTTTGGTTCCTGG--GCTGGGCAG--------CTGTACCTCACCCC-------------------------GGACTTTGTGGC-CTAAGTCCTTCCTGCCGTTTATCA-CC--CAGATACCTGCACAGACACAATGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACGTGGTGA-CCTGTCATAGGCCAAGGGATGAGAAGAGGGTGCCAGGAGCGTTGGG-GCCCCGAGGTGGCTCAGATGGAAGCCAT----GGGACGGCCGTCCCCAGGCCCGCGCAtctgcacctcagtttcccctttgtgaaatgggaaacttatgcttccttccaagtctgcaatatcggtgccatgagctaaaagtggagcgAAAGACACAAGGAAGAAG-------CTTCCCATTCCCAGGACCTGCCCCCAAGCT--CTGACCCCACATTGTGGATGCAAAGAAAGGGAATTTGTCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGCGCTCTCTGGATACCCAGAAGCTGGAGCAGGGGCCCACGA-GACTCTTGTCCGGA---CAAAACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGTCCCTGGGC---------------GGAGGG------CAGGGAGGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGAGTATTT--AGCTGGGGAAAAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGGG--GAGGAGAC------------------------------AGCGGCCTGGTTCACAGAATTCCCGGG------------------A-----CCAGCTGGCAGAGGGAGCGTCACGG----AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCCAAAGCCAGCCCCAGCCCCAGGGCTGCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGCGTGTCGGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCGTAGGCGCGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGCCCCCGCAGGGCTGACTCCAGCCGGCCCTCGGCAGCCAGGCACAGAGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTCCT-GAGGAGG- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47143510 1835 + 51301725 cctcctccctcaga-ccaggaaaccaggtccccagcccctcctccctcaggcccaggAGTCCGAGTGCCAGTCTCTACTTTCCCTGAACCCAGGGGCCCACAGTCCTCAACTCCATCCCCAGG-----------------CGTGGACCCCTCATACTCCAGGACA---GAGTCCAGTCCTCAACTTCCTTTTCCTTCTAGCTCAGAAGTGTGGGAACCCAGCCTCTCCTATTCCCAAGACACCCAAACTCCCA-------------------------------------GCCCTTAGCCCTCCCCTCC----TTCCAGACTAGCCTGGTTCTCTAGGCTTCTCCTCCTCAGACCCCAGAGTTTCAGCCTTCAGTTCCTTTCTCCCCC---ATATCAGGAAGTGGAACCT--TCTCTTTAGCCCTT-AGACTTAGGAGG----------CCTT---TCCTCCCGCAGGACTCCCACCTAGCCTGAAGGTCGGATGGATCTGAGCTTCTCCTGGCAT-C---CCTACCTCCTCTGGCCTCCCGGGGGGCCAGCCACCCCCTGGAGGAGCCCCAGGCTTCTGATTCCAAGGTTGGGTTTT-CTTCCATGGCCCCAGGCTGGGCT------GTTTCTAGTGGCCA-CCAGGCAAACACTGCCCCAGGTA----AGGGAGGGGCCCGGGGCAGGTGTGTACCTGGCCAGTAGGTGGCCCGG---AGGGAGTAAGGTATA---CTTCCTGTAGTTTCTCAGGGCCGCTGATGCGAAAGGTGTCCTGGGAACTGAAGTCCCTCTGGTGCCCCA---GGCCTGACGGTTTGGTTCCTGG--GCTGGGCAG--------CTGTACCTCACCCC------------------------GGGACTTCGTGGT-CTAAGTCCTTCCTGCCGTTTATCA-CC--CAGATACCTGCACAGACACAATGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACATGGTGA-CCTGTCATAGGCCAAGGGATGAGAAGAGGGTGCCAGGAGCGTTGGG-GCCCCGAGGTGGCTCAGATGGAAGCCAT----GGGATGGCCGTCCCCAGGCCCACGCATCtacacctcagtttcccctttgtGAAATGGGAAGCTTATGCTTCCTTCCAAGTCTGCAATATCGGTGCAATGAGCTAAAAGTGGAGCGAAAGACAC----AAGAGG-------CTTCCCACTCCCAGGACCTGCCCCCAAGCT--CTGACCCCACATTGTGGATGCAAAGAAAGGGAATTTGTCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGTGCTCTCTGGGCACCCAGAAGCTGGAGCAGGGGCCCACCA-GACTCTTGTCTGGA---CAAAACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGTCCCTGGGC---------------GGAGGG------CAGGGAGGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGAGTATTT--AGCTGGGGAAAAGGAAATTCTCTCCAGGACCCTCTCCAAGATAAAGACTCTTTCTGGG--GAGGAGAC------------------------------AGCGGCCTGGTTCACAGAATTCCCGGG------------------A-----CCAGCTGGCAGAGGGAGCGTCATGG----AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCCAaagccagccccagccccagggctgCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGCGTGTCGGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCGCGCATCTTCAGGAACCAGTGTACCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGTCCCCGCAGGGCTGACTCCAGCCGGCCCTCGGCAGCCAGGCACAGAGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTcct-gaggagg- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46848769 1855 + 50890351 cctcctccctcaga-ccaggaaaccaggtccccagcccctcctccctcaggcccaggagtccgggtgccagtctgtactctccctggacccaggggcccacagtcctcaactccatccccAGG-----------------CGCGGACCCCTCCTACTCCAGGGCAGAGGAGTCCAGTCCTCAACTTCCTTTTCCTTCTAGCTCAGAAGTGTGGGAACCCAGCCTCTCCTATTCCCAAGACACCCAAACTCCCA-------------------------------------GCCTTTAGCCCTCCCCTCC----TTCCAGACTAGCCTGGTTCTCTAGGCTTCTCCTCCTCAGACCCCAGAGTTTCAGCCTTGAGTTCCTTTCTCCCCCATAATATCAGGAAGTGGAACCT--TCTATTTAGCCCTC-AGACTCTGCAGGCCAGGCCTCCCCTT---TCCTCCAGCAGGACTCCCCCCTAGCCTGAAGGCCAGATGGATCCGAGCTTCTCCTGGCAT-C---CCTACCGCCTCTGGCCTCCCGGGGGGCCAGCCACCCGCTGGAGGAGCCCCAGGCTTCTGATTCCAAGGTTGGGTTTT-CTTCCATGGCCCCAGGCTGGGCT------GTTTCTAGCGGCCA-CCAGGCAAACACTGCCCCAGGTA----AGGGAGGGGCCCGGGGCAGGTGTGTACCTGGCCAGCAGGTGGCCCGG---AGGGAGTAAGGTACA---CTTCCTGTAGTTTCTCAGGGCCGCTGATGTGAAAGGTCTCCTGGGAGCTGAAGTCCCTCTGGTGCCCCA---GGCCTGACAGTTTGGTTCCTGG--GCTGGGCAG--------CTGTACCTCACCCT------------------------GGGACTTCGTGGC-CAAAGTCCTTCCTGCCGTTTATCA-CC--CAGATACCTGCACAGACACAATGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACATGGTGA-CCTGTCATAGGCCAAAGGATGAGAAGAGGGTTCCAGGAGCGTTGGG-GCCCCGAGGTGGCTCAGATGGAAGCCAT----GGGACGGCCGTCCCCAGGCCCGCGCAtctgcatctcagtttcccctttgtgaaatgggaagcttatgcttccttccaagtctgcaatatcggtgcaatgagctaaaagtggagcgAAAGACACAAGGAAGAGG-------CTTCCCACTCCCAGGACCTGCCCCCAAGCT--CTGACCCCACATTGTGGATGCAAAGAAAGGGAATTTGTCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----TGTTTTGGGGAAGTGCAGTGCTCTCTGGATACCCAGAAGCTGGAGCAGGGGCCCATGA-GACTCTTGTCTGGA---CAAAACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGTCCCTGGGC---------------AGAGGG------CAGGGAAGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGAGTATTT--AGCTGGGGAAAAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGGG--GAGGAGAC------------------------------AGCAGCCTGGTTCACAGAATTCCCGGG------------------A-----CCAGCTGGCAGAGGGAGTGTCACGG----AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCCAAAGCCAGCCCCAGCCCCAGGGCTGCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGCGTGTCGGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCGCGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGCCCCCGCAGGGCTGACTCCAGCCGGCCCTCGGCAGCCAGGCACAGAGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTCCT-GAAGGGG- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45430073 1803 + 49145316 cctcctccctcggacccaggagtccagg-ccccaggccctcctccctcagacccaggagtccaagtgccagcctctacttcacctgaacccaggggtccacagccctcgatcccatccccAGGGACTCAAA---------TGTGGACCCCTCCTACTCCAGGGCAGAGGAGTCCAGCCTTCAACTTCCTTTTCCCTCTAGTTCGGGAGTGTGGGGACCCAGCCTCTCCTATACCC--GACACCCAAACTCCTA-------------------------------------GCCTCTCACCCTCCCCTCC----TCCCAGACTAGCCTGGTTCTCCAGGCTCCTCCTCCTCAGACCCTGGAGTTCCAGCCTCCACTTCCCTTCTCTCCTGTAATACCAGGAAGTGAAACCTTCTCTCTTCAGCCCTC-AGGCTCAGGAG--------------------------------TCCCACCTAGCCTGAAGGTTGGGTGGATCTGAACCTCTCCTGGCTT-C---CCTACCTCCTCTGGCCTCCCGGGGGGCCAGCCACCCGCTAGAGGAGCCCCAGGCTGCTGAATCCAGGGTCGGGTTTT-CTTCCATGGCCTCAGGCTGGGC--------TCTCTAGTGGCCA-GCAGGCAGACACGGCCCCAGGTA----AGGGCGGGGCCAGGG-CAGGTGTGTACCTGGCCGGCAGGTGGCCCGG---AGGGAGTTAGGTACACTTCTTCCTGTAGTTTCTCAGGGCTGGGGATTCGAAAGGTCTCCTGGGACCTGAAGTCCCCGTGGTGCCC-G---GGCCTGACCGTTTGGTTCCTGG--GCCAGGCTGGCCG----CTGCACCTCAC-----------------------------------------CTGAGAC--TCCCGGTGTTTGTCA-CCCGCAGGTACTTGCACAGACACGATGCATTTGTGCA--ACTTTATTGGGAAAGATTTACACACTGTGA-CCTGTCACAGGCCAAAGGATGAGAAGAGGGAGCCAAGAGTGTTGGG-GCCCCAAGGTGGCTCAGACATAAGCCGT----GGGGTGGCAGGCCCCAGGCCTGTGTAtccgtgcctcagtttcctttttgtgaaatgggaagcttatgcttccttccaagtctgcaatatgggcgtgatgagctaaGGGCGGAGTGAGAGACACAGGGAAGAGG------------------------CTGCCCC--AGCT--CCAACCCCACACTGTGGATGC--AGAAAGGGAATTTGCCC-AAA--CCCACCACCCAGAGGCCCCTTC-----CGTTCTTGGGTAGCGCAGTGCTCTCTGAAGATCCCAAAGCCGGAGCAGGGGCAAGGGA-GACTTT--TCAGGA---CAGGACTTGGATTTTGTAGGAGGGGAGTGGCCACTG---GA-------GGCCCCTGGGC---------------AGAGGG------CAGGGAGGACACTGGCAAGTCTGCTTC-AGTGGCAGGCAGGGTATT---AGCTGGGGAAGAGGAAATTCTCTCCAGGACCCTTGCCAAGGTAAGGACTCCTTCTGGG--GAGGAGAC------------------------------AGCAGCCTGGTTCACAGAATCCCCGGG------------------A-----ACCGCTAGCAGAGGGAGCGTCTCGA----AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGAGGCTGCCTTCCGCCGGCCGGGGCTGCCCCCAGCCAATGCCAGCCCCAGCCCCAGGGCAGCCAGGGCCAGGAAGTGGATGCAGAAGTAGATGGAGGCCCAGTACCGAAGTGTGTCTGCCATTGAGAGGAGCACGAAGCCCATGCACATGTAGTCATAGGCACGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGCCCCCTTGGGCTCAGCCGCCCCCGCAGGGCAGACTCCAGCCGGCCCTCCGCAGCCAGGCACAGCGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCATGCCAGTAGGCACTCAGCAGCATGGTCCAGGCGCTCCT-GAGGAGG- i calJac3.chr22 C 0 I 1119 s mm10.chr7 3677105 1754 + 145441459 ----------------------TTCGTGGCCCTAGACTCTCCCCCAC--------GGAGTCTAGGT-----------------TTGAACTC------CCATATCCCT-----TCTACTCTAAG-----------------TGTG----------ACTCTA--------AACTTCAA----CAACTTCCCGTTCCCTC--ATTGGTGAGCTTAGAATCCTGGCTCCTCACAAGCCTGATA---TTAGGGACCCG-------------------------------------TTTCCTGACTCTGTCCTCCAAGACCGTAAACTTGTACTGTTTTTCGGG------------AAATC---------------TGAGTTTCCTTCT---TAGGAAACCCAGGAAATGAAAGT---CCTCTTCGAGTCTC-AGGTTCAGGAGCTCAG--CTTCCCT----TCCTTTA--------------------------TGAATGGACCTGA--CTTTGCTGGACT-CTCTCCTACCTGTTCTGGCTTTCCGGGAGCTGGAGCAGGCTGGGGACTGGCCCCAGGCTTCCATGTTTGTGGATGTACCGTACTTCCA--GCACCCGTTCTTTCT------GTCTCTGGAGGCCC-CAGGGCGGGGACTGCCCTCGGTAAGGGAGGGAGGGGCCTGCTACAGGTCTGCACCTGGCCACTAGGTGACCCGG----GTGACTGCGGTACA---TTTCCTAT-----------------------AAAGGTCTCCTGGGAATTGAAGTCCTTACAGCCTCCTGAGCGGCCAAAC-------TTCATGGCAGCCAGACCC--------CCCCACCCCACCCCCCCAATACACACACAAATGCACACTGGCATTCTGGGT-CAGTGTCTTT-----GGTTTGTTG-CCCACAGTTATACTCACAAACA-AATGCA--TGTGTAACACTTTATTGGGAAAGCTTTATACATTCTGG-CCTGTCACAGGCCAAG-GATGACACTGGGTGGTAGGTTGTATGGGGAGCCCAGAAATGGCTCAGGCAGAAGCTGCTGTAAGAGCAAGCTCCCCTGGGGCTTCTCA----CATTTTAGCTTCTCCTTCAGCATGTGTAAGAC-CATGGTC---------TCTGAAACACTGGTGTGATGA--TAAAAACAAAGAGGAAAAC------AAGAAGGCTATCCCTCCCCTCTCCCAGAACCTGGCCCTGAAGTTCCTGCCCCCATACTGGGGACCC----ACTGGGAGTCTGTCTAAGATGCCAGATGACCACTGGTCCCTGCAAGGGCATTTTTGGGAAGTGTG--GCTTTTTGAACATCTGAAGATTGTTGCAGAGATAATAGG---TTCAAGAGTGGATAGTAATACCCTGATGTTAGCAGAG-GAA---------G---GTCTGAAAAGGTCAAGATGC---------------TGAGAGAGCCCAAGAGAAGGATACC------TTAGCTTTAAATAGAAGGCAGAGGAATT--A-TTTGGGAAGAGGGGATCCTCTCCAGGCTCTTAGCCAAACAAGGGATTCTTGCTGGGTAAAGGaaacaaacaaacaaacaaacaaaAACCCCAAACAAACAGCCTGGTTCATGGAATTCCCAAA------------------AAAGCTTGAACTGGAAGGCAGGCCAATGCAGCAG-AGCTCACTCTTCCCGGAGCTTTTCCTTCGCTTGGCTGCTGGTGGCCTGGGATGGTGTCTTCCTCTTGCTGGGGCTGCCCCCACCCAAAACCAGCCCCAGCCCCAAGCAAGCCAGGGCTAGAAAGTGGACCCAGAAGTAGATGGAGGCCCAGTACCGGAGTGTGTCAGCCATGGAAAGGAGCACAAAGCCCATGCACATGTAGTCGTAGGCACGCATCTTCAGGAACCAGTGGACCCAGTCCCAGGCTTTCTGGCCCCCGGGGCTCAGGTGTCTCCGCAAGGCTGACTCCAAATAGCCCTCAGCAGCCAGGCACAGCGGGATGGTCATGAAGCTTAGGTAGTAACCAGGGTGGAGGCCATGCCAGTAGGCACTCAACAGCATGGTCCAGGCACTCCTGGAGGAAG- i mm10.chr7 C 0 C 0 s canFam3.chr1 19637707 1796 - 122678785 CCTCCTCCCTCAGACCCAGGAGCCCAGG-CCCCTGCTCCTCCTCCCTCAGACCCAGGAATCCAGGTCCCCAGTCCCTCCTCCTTCAGACCCAGGAGTCCA-GGCCCCATGTCCCCTCTGTAAGCACTGAAATGTGGGCTCCCTAGACCCCTCCTTCCTCAGGGCTGAGGAACCCAGTCTTCAATTTCCTTTTTCCTCTTGCTCAGGAGTTT-GCAACCCTGCCCCCCCTCTTC--------------------------------------------------------------------TCCCCTCT----------ACT------GCTCCCCAGG--------------ACACAGGAGTCCTAGCTCCTGGTTCCCTTCTCCCTCAGACAACCAGGAATTTAACCCT-CCCCCTTCTGCCCTCTGGACCCTGGAGTTTCAGCCTCCGGTCCCTGCCTCCCTCAGGACTTCCACC-AGCCCAA---------GGGGCTGGACCCCCTCCCACGC-C---CCCACCTGCTCTGGCCTCCCGGGGTGCCAGCCACCCTCCAGGGGAGCCCCAGGCCTCCGGTTCCCATGTCGGGCGCT-CTTCCATGGCCGCAGGTGAAACTGTTTCCGTCTCCAGCGGCCAGCTGGGCGCGGTCAGCCGCAGGTA----AGGAAGGGACATGGG-CAGGTCCATACCTGGCCACCAGGTGGCTCAGGGAGGGGAATCCGAAGCA---CTTGTCATCAACCAACAGGGCGGCTGCT-CGAAAGGTCTTCTGGGAACCGAAACCCCCA-GATGCC------AGTGTGACACCAGGGAGCCTGG--CTCGAGCCCATC-----CTGCAGCGCCCATC------------------------CTGCAGCGGCTGT-GTGAGCCCCACAC-CTGGTGGTCA-CTCATAGACACACATACAGAC--------CTCTTGGAACATTTTATTGGGGGAGGTTCACATAGTCTGACCCTACCTTAGGCCAGAAAATGACAAGAGGGTGACATAAGCACTGGG-ACCCTGAGGTGGCTCAGATGGAAGCTGC----AG---------CTCCTAGC-----------TGCCTCAGTTTACCCGTTGTGAA-----------ATGTTCCCTTCCCGGCCTGAAACACTGCT-TGATGA---------AAGGGGGAAAGCCCACGAGAGAGG--------TTCCCACTCCCAGGGCCTGCCCTGAGGCT-CCCGGCCCCACACCATGGAGCCAGAAACAGGGAATTTGCCCGAGA--AT-----CCCCGTGGCCCTGTT--GGGGGGCTGGGGAGTGGGTAGCTCGCTCTGAAGACCTGGCAGCTGGGGCAGGGACCAAGGGAGATTCT--TCTAGA---CAACACCTGAACTTTCCAGAAGGGAA---------GTCTGA-------GCTTCCTGAGCCCTCGGGTCAGGGCAGGGGAG------CAGGGAGAGCAGCCCTGC-CTTGCT---GGGGGAGGGTGGGGTGCAG--AGCTG------AGGGAATCCTCTCCAGGCCCCAGCCCAA-TCAGGGGCTCTTTCTGGG-AAAGGAGAC------------------------------AGCAGCCTGGTTCATGGAATTCCCAGGCAGAAGCTTAGTGGCTGCA-----GTGGCGGGCAAA-GGAGTGTCACGGCGGTGGCCTACTCCTCCCGGAGTTTTTCTGGGGCGAG---GCTGGCGGCCTGGGGTGACGTCTTCCTGCGGCCGGGGCTGCCCCCACCCAGGGCCAGCCCCAGCAGCAGGGCGGCCACAGCCACGATGTGGACACAGAAGTAGACAGAGGCCCAGTACCGGAGGGTGTCTCCCAGGGACAGCAGCACAAAGCCCATGCACATGTAATCGTAGGCGCGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGGCCCCCGGGGCTGAGCCGCCCCCGCAGGGCTGACTCCAGGCAGCCCTCAGCCGACAGGCACAGCGGGATGGTCAGGAAGCTTAGGTAGTAGCCAGGGTGCAGGCCGTGCCAGTAGGCGCTCAGCAACATGGTCCAGGCGCTCCT-TGGGGGAG i canFam3.chr1 I 878 C 0 a score=42844.000000 s hg38.chr19_GL949747v2_alt 149248 14 + 729520 AGGCTGGGAGTCAG s panTro4.chr19 59083869 14 + 63644993 AGGCTGGGAGTCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959678 14 + 60714840 AGGCTGGGAGTCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726120 14 - 106955855 CAGCTGGGAGTCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60017537 14 + 64156825 AGGCTGGGAGTCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55041178 14 + 59248254 AGGCTGGGAGTCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145345 14 + 51301725 aggctgggggtcAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46850624 14 + 50890351 AGGCTGGGAGTCAG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3678859 12 + 145441459 --ATATTGAGTCAG i mm10.chr7 C 0 C 0 s canFam3.chr1 19639503 14 - 122678785 AGGCCGAGATTCAG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45431876 1119 + 49145316 I a score=253274.000000 s hg38.chr19_GL949747v2_alt 149262 78 + 729520 GACCTACGagtccaggtccccagtgcccactgcccccagatccaggagtccaggaccccag--cccctcctccctcagac s panTro4.chr19 59083883 78 + 63644993 GACCTACGagtccaggtccccagtgcccactgcccccagatccaggagtccaggaccccag--cccctcctccctcagac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959692 78 + 60714840 GACCTGCGagtccaggtccccagtgcccacggtccccagatccaggagtccaggaccccag--cccctcctccctcagac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726134 78 - 106955855 GACCTGCAagtccaggtccccagtgcccactgcccccagatccaggagtccaggaccccag--ccccgcctccctcagac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60017551 78 + 64156825 GACCTGCGagtccaggtccccagtgcccactgaccccagatccaggagttccgggctccag--cccctcctccctcagac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55041192 78 + 59248254 GACCTGCGagtccaggtccccagtgcccactgaccccagatccaggagtcccgggctccag--cccctcctccctcagac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145359 78 + 51301725 GACCTGCGAGTCCAGGTCCCCAGTGCCCACTGACACCAGATCCAGGAGTCCGGggctccag--cccctcctcccttaGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46850638 78 + 50890351 GACCTGCGagtccaggtccccagtgcccactgaccccagatccaggagtccggggctccag--cccctcctccctcagac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45432995 77 + 49145316 gacccagaaatccagagccccagc-ctctcctcccccagccccaggagtccagacccccag--cccctcctccccaagcc i calJac3.chr22 I 1119 C 0 s mm10.chr7 3678871 54 + 145441459 GACACACAAGTTCAAG-CTTCAGTCCTCACTGTCTCATG-------------------------CCTCCCTTCCTCAAGC i mm10.chr7 C 0 C 0 s canFam3.chr1 19639517 79 - 122678785 GACCCGGGAG-CCAGGCCCCCTAGCCCCTCCTCCCTCAGACCCAGGAGTCCAGGCCCCCCAGCCCCCTCTTCTCTCAGAC i canFam3.chr1 C 0 C 0 a score=76359.000000 s hg38.chr19_GL949747v2_alt 149340 35 + 729520 cgagaagtgcagg--cccagcccc-tcctccctcagac s panTro4.chr19 59083961 35 + 63644993 ccagaagtgcagg--cccagcccc-tcctccctcacac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959770 13 + 60714840 ccagaagtgcaga------------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726212 35 - 106955855 ctagaagtgcagg--cccagcccc-tcctccctcagac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60017629 34 + 64156825 ccaggagtgcagg--cccagcccc-tcctccctcaga- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55041270 35 + 59248254 ccaggagtgcagg--cccagcccc-tcctccctcagac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145437 36 + 51301725 CCAGGAGTGCAGG--ccccaccccgtcctccctcagac i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45433072 37 + 49145316 ccaggagtccagacccccggcccc-tcctcccccaggc i calJac3.chr22 C 0 C 0 s mm10.chr7 3678925 35 + 145441459 CCAGGAGTACAGG--GCTCAGCCC-TCCTCCCTCAGAT i mm10.chr7 C 0 C 0 s canFam3.chr1 19639596 36 - 122678785 CCAGGAGTCCAGG-CCCCAGCCCC-TTCCTCCTCAGAC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46850716 0 + 50890351 C a score=57425.000000 s hg38.chr19_GL949747v2_alt 149375 31 + 729520 ccaggagtccaga-ccccacc-ccttcctccct s panTro4.chr19 59083996 31 + 63644993 ccaggagtccagg-ccccagc-tcctcctccct i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60017663 32 + 64156825 ccaggagtccaggcccccagc-ccctcctccct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55041305 31 + 59248254 ccaggagtccaga-ccccagc-ccctcctccct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145473 32 + 51301725 ccaggagtccaga-ccccacctccctcctccct i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45433109 31 + 49145316 ccaggagtccagg-ccccagc-ccctcctccct i calJac3.chr22 C 0 C 0 s mm10.chr7 3678960 29 + 145441459 TTAGGAGTTCAGG-CCC--AC-TCTTCCTTCCT i mm10.chr7 C 0 I 4687 s canFam3.chr1 19639632 30 - 122678785 CCATGAGTCCAGG-CCCCA-C-CCCTCCTCCCT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55959783 0 + 60714840 C e nomLeu3.chr10 102726247 0 - 106955855 C e chlSab2.chr6 46850716 0 + 50890351 C a score=120964.000000 s hg38.chr19_GL949747v2_alt 149406 90 + 729520 cagacccaggagatcagg-ccccag--tccctcctccctcagacccaggagaccag-accccacc-----------------------------------tccctcctccctcagatccaggagtccag s panTro4.chr19 59084027 124 + 63644993 cagacccagaagtgcagg--cccag--cccctcctccctcacacccaggagtccag-accccaccccttcctccctcagacccaggagatcaggccccagtccctcctccctcagacccaggagtccag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959783 71 + 60714840 --------------------cctgg--cccctcctccctcagacccaggagtccag-accccacc-----------------------------------ttcctcctgcctcacatccaggagtccag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60017695 89 + 64156825 caga-ccaggagtccaggcccccag--cccctcctccctcaga-ccaggagtccag-gcccccag-----------------------------------cccctcctccctcagacccaggagtccag i rheMac3.chr19 C 0 M 200 s macFas5.chr19 55041336 90 + 59248254 cagacccaggagtccaggcccccag--cccctcctccctcaga-ccaggagtccag-gcccccag-----------------------------------cccctcctccctcagacccaggagtccag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145505 61 + 51301725 cagatccaggagaccagg-ccccag--gccctccccactcagacccaggagaccag-gccccagg---------------------------------------------------------------- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45433140 90 + 49145316 cagacccagaaatccagacccccag--cccctcctccctcagacccaggagtccag-gccccagc------------------------------------ccttcctcccccagacccaggagtccag i calJac3.chr22 C 0 C 0 s canFam3.chr1 19639662 94 - 122678785 CAGACCCAGGAGTTCAGGCCCCTCGGCCCCCTCCTCCCTCAGACCCAGGAGTCCAGAGTCCCAGC-----------------------------------CCGCTCCTCCCTCAGACCCAGGAGTTCAG i canFam3.chr1 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e nomLeu3.chr10 102726247 0 - 106955855 C e chlSab2.chr6 46850716 0 + 50890351 C a score=3412.000000 s hg38.chr19_GL949747v2_alt 149496 18 + 729520 --accccacttccctcctcc s panTro4.chr19 59084151 18 + 63644993 --accccacctccctcctcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959854 7 + 60714840 --agcccac----------- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55041426 18 + 59248254 --gcccccagcccctcctcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145566 9 + 51301725 -----------ccctccccG i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45433230 17 + 49145316 ---gccccagcccctcctcc i calJac3.chr22 C 0 C 0 s canFam3.chr1 19639756 20 - 122678785 GCCCCTCAGCCCCCTCCTCC i canFam3.chr1 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e nomLeu3.chr10 102726247 0 - 106955855 C e chlSab2.chr6 46850716 0 + 50890351 C e rheMac3.chr19 60017784 200 + 64156825 M a score=9440.000000 s hg38.chr19_GL949747v2_alt 149514 7 + 729520 ctcagat s panTro4.chr19 59084169 7 + 63644993 ctcagac i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60017984 7 + 64156825 ctcagac i rheMac3.chr19 M 200 C 0 s macFas5.chr19 55041444 7 + 59248254 ctcagac i macFas5.chr19 C 0 C 0 s calJac3.chr22 45433247 7 + 49145316 ctcagac i calJac3.chr22 C 0 C 0 s canFam3.chr1 19639776 7 - 122678785 CTCAGAC i canFam3.chr1 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e ponAbe2.chr19 55959861 0 + 60714840 C e nomLeu3.chr10 102726247 0 - 106955855 C e chlSab2.chr6 46850716 0 + 50890351 C e papAnu2.chr19 47145575 0 + 51301725 C a score=102117.000000 s hg38.chr19_GL949747v2_alt 149521 44 + 729520 ccaggagaccagaccc--cacctccctcctccctcagatccaggag s panTro4.chr19 59084176 44 + 63644993 ccaggagaccagaccc--catttccctcctccctcagatccaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959861 25 + 60714840 ---------------------ttccctcctccctcagatccaggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726247 44 - 106955855 ccagaagaccagaccc--cacctccctcctccctcagatccaggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60017991 44 + 64156825 ccaggagtccagaccc--cagctccctcctccctcagatccaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55041451 44 + 59248254 ccaggagtccagaccc--cacctccctcctccctcagatccaggag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46850716 43 + 50890351 tcaggagcccaggccc--cacc-ccctcctccctcagatccaggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45433254 44 + 49145316 ccagaaatccaggccc--ccagcccctcctccctcagacccaggag i calJac3.chr22 C 0 C 0 s canFam3.chr1 19639783 46 - 122678785 CCAGGAGTTCAGGCCCCTCAGCCCCCTCCTCCCTCAGACCCAGGAG i canFam3.chr1 C 0 I 2038 e mm10.chr7 3678989 4687 + 145441459 I e papAnu2.chr19 47145575 0 + 51301725 C a score=674534.000000 s hg38.chr19_GL949747v2_alt 149565 264 + 729520 accaggccccaggccctccccactcagacccatga-------ccctagctccGGAAGGCGGAGGAGGCTACAGGCCTCTGTCTCCTTCAGGGATCCAGGAGCTCGCAGCCTTCCATACACACT---CAGTCCTAT-CAAGACCCTCTTCTTCTTTAAAGATTTAACATTTTATAT-----TCCACTGCCCTTCCTCTCCCAGGACCAACAAGTCTTAATTCTTCAGCCCAGT--GG-----ttttttttt-tttttttttgagacagagtctcgctctgtcgcccagg s panTro4.chr19 59084220 266 + 63644993 accaggccccagaccctccccgctcagacccaTGC-------CCCTAGCTCCGGAAGGCGGAGGAGGCTACAGGCCTCTGTCTCCTTCAGGGATCCAGGAGCTCGCAGCCTTCCACACACACT---CAGTCCTAT-CAAGACCCTCTTCTTCTTTAAAGATTTAACATTTTATAT-----TCCACTGCCCTTCCTCTCCCAGGACCAACAAGTCTTAATTCTTCAGCCCAGT--GG---ttttttttttt-tttttttttgagacagagtcttgctctgtcgcccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959886 260 + 60714840 accaggccccaggccctccccgctcagacccatgc-------ctctagctccagAAGGCGGAGGAGGCTATAGGCCTCTGTCTCCTTCAGGGATCCAGGAGCTCCCAGCCTTCCATACACACT---CAGTCCTAT-CAAGACCCTCTCCTCCTTTAAAGATTTAACGTTTTATAT-----TCCACTGCCCTTCCTCTCCCAAGAACAACAAGGCATAATTCTTCAGCCCAGT--GG---------ttttt-tttttttttgagacagagtctcgctctgtcgcccagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726291 273 - 106955855 accaggccccagaccctccgcgctcagacccaTGC-------CCCTAGCTCCAGAAGGTGGAGGAGGCTATAGGCCTCAGTCTCCTTCAAGGATCCGGGAGCTCGCAGCCTTCCATACACACT---CAGTCCTAT-CAAGACCCTCTCCTCCTCTAAAGATTTAACACTTTATATTCCACTCCACTGCCCTTCCTCTCCCAGGACCAACAAGTC-TAATTCTTCAGCCCAGT--GGtttttttttttttt-tttttttttgagacggagtctcgctctgtcgcccagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60018035 265 + 64156825 accaggccccaggccctccctgctcagaaccaTGC-------CCCTAGCTCCAGAAAGCGGAGGAGGCGATAG------GTCTCCTTCAGGGATCCAGGAGCTCGCAGCCTCCCATACACACT-CACAGTCCTAT-GAAGACCCTCTCCTCCTTTAAAGATTTAACATTTTATGT-----TCCACTGCCCTTCCTCTCCCAGGACCAACAAGTC-TAATTCTTCAGCCCAAT--GGTTTTTTTTTTGTTTGTTTTTTTTTTAGACAGAGTCTTTCTCTGTTGCCCAGG i rheMac3.chr19 C 0 M 581 s macFas5.chr19 55041495 265 + 59248254 accaggccccaggccctccctgctcagaaccaTAC-------CCCTAGCTCCAGAAAGCGGAGGAGGCGATAG------GTCTCCTTCAGGGATCCAGGAGCTCGCAGCCTCCCATACACACT-CACAGTCCTAT-GAAGACCCTCTCCTCCTTTAAAGATTTAACATTTTATGT-----TCCACTGCCCTTCCTCTCCCAGGACCAACAAGTC-TAATTCTTCAGCCCAAT--GGGtttttttttgtttgttttttttggagacagagtctcgctctgtcacccgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145575 242 + 51301725 ----------------------CTCAGAACCATGC-------CCCTAGCTCCAGAAGGTAGAGGAGGCTATAG------GTCTCCTTCAGAGATCCAGGAGCTCGCAGCCTCCCATACACACT-CACAGTCCTAT-GAAGACCCTCTCCTCCTTTAAagatttaacattttatgt-----tccACTGCCCTTCCTCTCCCAGGACCAACAAGTC-TAATTATTCAgcccagt--ggttttttttttggtt-ttgttttttgagacggagtctcgctctgtcacccagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46850759 266 + 50890351 accaggccccaggccctccctgctcagaaccatga-------ccctagctccGGAAGGCGGAGGAGGCTATAG------GTCTCCTTCAGGGATCCAGGAGCTCGCAGCCTCCCATACACACT-CACAGTCCTAT-GAAGACCCTCTCCTCCTTTAAAGATTTAACATTTTATGT-----TCCACTGCCCTTCCTCTCCCGGGACCAACAAGTC-TAATTCTTCAGCCCAGTGGGGttttttttttgttt-tttctttttgagacggagtctcgctctgtcacccagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45433298 264 + 49145316 tccaggccctgggccctccctgctcaaacccaTGCCCCTTTTCCCTAGCTCCAGAAGGTGGAGGAGGCTATAGGCTGCTGTCTCCTTCAGGGATCCAGGAGCCCCGAGCCTTCCACACACACTTCACAGCTGTATCCCAGGCCATCTCCTCCTTTAAAGATTGATCATTTTATGT-----TCCACTGCCCTTCCTCTCCCAGGACCAAGAAGTC-TAATTGTTGGGCCCACT--GGttctttttctttct----------------gagtcttgccctgtggctcagg i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I a score=107570.000000 s hg38.chr19_GL949747v2_alt 149829 46 + 729520 ctagagtgcagtggcgcgatcttggctcactgcaagctccgcctcc s panTro4.chr19 59084486 46 + 63644993 ctagagtgcagtggcgcgatctcggctcactgcaagctccgcctcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55960146 46 + 60714840 ctagagtgcagtggcgcgatctcggctcactgcaagctccgccttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726564 46 - 106955855 ctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55041760 46 + 59248254 ctggagtgcagtggccggatctcagctcactgcaagctccgcctcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145817 46 + 51301725 ctggagtgcagtggctggatctcgactcactgcaagctccgcctcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46851025 46 + 50890351 ctggagtgcagtggcccgatctcagctcactgcaagctccgcctcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45433562 46 + 49145316 ctggagtgcagtgacgcaatctcggctccctgcaacctccgcctcc i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e rheMac3.chr19 60018300 581 + 64156825 M a score=5192.000000 s hg38.chr19_GL949747v2_alt 149875 4 + 729520 cagg s panTro4.chr19 59084532 4 + 63644993 cggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55960192 4 + 60714840 cagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726610 4 - 106955855 cggg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55041806 4 + 59248254 cagg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46851071 4 + 50890351 cagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45433608 4 + 49145316 ttgg i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e papAnu2.chr19 47145863 0 + 51301725 C e rheMac3.chr19 60018300 581 + 64156825 M a score=53422.000000 s hg38.chr19_GL949747v2_alt 149879 48 + 729520 ttcacgccattctc-ctgcctcagcctcccgagtagctgggactacagg s panTro4.chr19 59084536 48 + 63644993 ttcacgccattctc-ctgcctcagcctcccgagtagctgggactacagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55960196 48 + 60714840 ttcacgccattctt-ctgcctcggcctcccgagtagctgggactacagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726614 48 - 106955855 ttcacgccattctc-ctgcctcagccaccagagtagctgggactacagg i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 46851075 48 + 50890351 ttcaagtgattctc-atgcctcagcctcccaagtggctgggattacagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45433612 48 + 49145316 ttca-gccattgtcactgcttcagcctcccgagtagctgggattacagg i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e papAnu2.chr19 47145863 0 + 51301725 C e macFas5.chr19 55041810 0 + 59248254 C e rheMac3.chr19 60018300 581 + 64156825 M a score=205251.000000 s hg38.chr19_GL949747v2_alt 149927 292 + 729520 cgcccgccaccacgcccggctaattttcttttctatttttagtagagac-ggggtttcaccgtgttagccaggatggtctcgatctcctgacctc--gtgatctgcccgccttggcctcccaaagtgctgggatcacaggtgtcagacaccacacccggGC-AGCCcggtggttcttaacctggggtcccaggtctggcatcagcatcacctgagaacttgtgagacatacaaatccttgtccccaccccttttgcaccagaagccct-gg---gggtggggcccaggagaagtcttcca s panTro4.chr19 59084584 293 + 63644993 tgcccgccaccatgcccggctaattttcttttctatttttagtagagat-ggggtttcaccgtgttagccaggatggtctcgatctcctgacctc--gtgatccgcccgccttggcctcccaaagtgctgggatcacaggtgtcagccaccacacccggGC-AGCCTGgtggttcttaacctggggtcccaggtctggcatcagcatcacctgagaacttgtgagacatacaaatccttgtccccaccccttttgcaccagaagccctggg---ggggggggcccaggagaagtcttcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55960244 292 + 60714840 cgtctgtcaccacacccggctaattttcttttgtatttttagtagagac-ggggtttcaccgtgttagccaggatggtctcgctctcctgacccc--gtgatccgcctgcctcggcctctcaaagtgctgggattacaggtgtgagccaccgcacccggtc-AGCCcggtggttcctaacctggggtcccaggtctggcatcatcatcacctgagaacttgtgagacatacaaatccttgtccccaccccttttgcaccagaagccct-gg---ggttggggcccaggagaagtcctcca i ponAbe2.chr19 C 0 I 478 s nomLeu3.chr10 102726662 296 - 106955855 cgcccaccaccacgcccggctaattttcttttgtatttttagtagagac-ggggtttcaccgtgttagccaggatggtctcgatctcctgacctc--gtgatctgccctccttggcctcccaaagtgctgggattacagacatgagccactgtgtccggccTAGCCcggtggttcttaacgtggggtcccaggtctggcatcaacatcgcctgagaacttgtgagacatacaaatccttgtccccaccccttttgcaccagaagccct-ggttagggtggggcccaggagaagtcttcca i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45433660 273 + 49145316 catgtaccaccactcctggctaat----ttttctattcttagtagaggcgggggtttcaacatgttggccaggctggtctcaaactcttgacctcaggtgatccgcccacctcagtctcccaaagtgctgggattctaggcgtgagccactgAAGTGGGCC----Ccagtggttctt------------cagctctggcatcagcatcgactgagaacttgtgacacacacagatccctgtcgccacgcctcctgcaccagaagccct-gg---ggctggggccc---agaactcttccg i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e chlSab2.chr6 46851123 0 + 50890351 C e papAnu2.chr19 47145863 0 + 51301725 C e macFas5.chr19 55041810 0 + 59248254 C e rheMac3.chr19 60018300 581 + 64156825 M a score=66628.000000 s hg38.chr19_GL949747v2_alt 150219 151 + 729520 agttaacaagtcctcca-gtgactctgatgcctgttaacatttgacaactcctgCCTGGCTCATGAAGATCCAGAAGTCCCTGGCCTGTGGTCCTTCCTTATTCTGGGCCCAGGAGATATGTTCCTCTTCCTCCAAGGCCCAGCACCATCTT s panTro4.chr19 59084877 151 + 63644993 ag-taacaagtcctccaggtgactctgatgcctgttaacatttgagaactcctgCCTGGCTCATGAAGATCCAGAAGTCCCTGGCCTGTGGTCCTTCCTTATTCTGGGCCCAGGAGATATGTTCCTCTTCCTCCAAGGCCCAGCACCATCTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102726958 151 - 106955855 gg-taacaagtcctccaggtgacttagatgcctgttaacatttgagaactcctgCCTGGCCCATGAAGGTCCAGAAGTCCCTGGCCTGTGGTGCTTCCTTACTCTGGGCCCAGGAGATATGTTCCTCTTCCTCCAAGGCCCAGCGCCATCTT i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45433933 141 + 49145316 gg-taacaagtattccaggtgacttcgatgcctgctaacatttgag-aCTGCTGCCTGGCCCATGAAGA---------CCCTGGTCTGTGGGCCTTCCTTATTCTGTGGCCAGGAGTTATGTTCCTCTTCCTCCAAGGCCCAGATCCATCTt i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55960536 478 + 60714840 I e chlSab2.chr6 46851123 0 + 50890351 C e papAnu2.chr19 47145863 0 + 51301725 C e macFas5.chr19 55041810 0 + 59248254 C e rheMac3.chr19 60018300 581 + 64156825 M a score=17634.000000 s hg38.chr19_GL949747v2_alt 150370 79 + 729520 TCCTCACtctttt----------tatttttttggagacagagtctcgctctgttgccacacgacaaggctcactgcagcctctgcctct s panTro4.chr19 59085028 89 + 63644993 TCCTCACtcttttttattttttatttttttttggagacagagtctcactctgtcgccacaggacaaggctcactgcagcctccgcctct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102727109 85 - 106955855 TCCTCACtctttt----tttttttttttttttggagacacagtctcgctctgtcgccatgcgacaaggctcaatgcaacctccacctct i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55960536 478 + 60714840 I e calJac3.chr22 45434074 0 + 49145316 C e chlSab2.chr6 46851123 0 + 50890351 C e papAnu2.chr19 47145863 0 + 51301725 C e macFas5.chr19 55041810 0 + 59248254 C e rheMac3.chr19 60018300 581 + 64156825 M a score=1813.000000 s hg38.chr19_GL949747v2_alt 150449 4 + 729520 tgga s panTro4.chr19 59085117 4 + 63644993 tgga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102727194 4 - 106955855 tggg i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47145863 4 + 51301725 tggg i papAnu2.chr19 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55960536 478 + 60714840 I e calJac3.chr22 45434074 0 + 49145316 C e chlSab2.chr6 46851123 0 + 50890351 C e macFas5.chr19 55041810 0 + 59248254 C e rheMac3.chr19 60018300 581 + 64156825 M a score=42472.000000 s hg38.chr19_GL949747v2_alt 150453 48 + 729520 ttcaagcgattcttatgcctcagcctcccaagtagctgggattacagg s panTro4.chr19 59085121 48 + 63644993 ttcaagcgattcttatgcctcagcctcccaagtagctgggattatagg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102727198 48 - 106955855 ttcaagctattctcatgcctcagcctcccaagtagctgggattacagg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55041810 48 + 59248254 ttcaagtgattctcatgcctcagcctcccaagtggctgggattacagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145867 48 + 51301725 ttcaagtgattctcatgcctcagcctcccaagtagctgggattacagg i papAnu2.chr19 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55960536 478 + 60714840 I e calJac3.chr22 45434074 0 + 49145316 C e chlSab2.chr6 46851123 0 + 50890351 C e rheMac3.chr19 60018300 581 + 64156825 M a score=409960.000000 s hg38.chr19_GL949747v2_alt 150501 330 + 729520 caagcgccaccaaactcagctaatttctgtatttt---ttgttgttgttgttcagacggagtctcgctctgccgcccatgctggagtgcagtggcgcaatctcggctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagcagctgggactacaggtgcccaccaccatgccaggctaatttttgtatttctggtaaagacggggtttcaccatgttggccaggatgctctcaatctcttgaccttgtgatccacccgccgtggcctaccaaagtgctgggattacaggcgtgagccactgcacccagcca s panTro4.chr19 59085169 330 + 63644993 caaatgccaccaaactcagctaatttttgtatttt---ttgttgttgttgttcagacggagtctcactctgccgcccatgctggagtgcagtggcgcaatctcagctcactgcaacctctgcctcccgggttcaagtcattctcctgcctcagcctcccaagcagctgggactacaggtgcccaccaccatgccaggctaatttttgtatttctagtaaagatggggtttcaccatgttggccaggatgctctcaatctcttgaccttgtgatccacccgccgtggcctaccaaagtgctgggattacaggtgtgagccaccgcacccagcca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102727246 333 - 106955855 caagtgccaccaaacccagctaatttttgtattttttgttgttgttgttgttcagacggagtctcgctctgccacccatgctggagtgcagtggtgcaatcttggctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagcagctgggactacaggtgcccaccaccatgccaggctaatttttgtatttctgttaaagacggggtttcaccatgttggccgggatggtctcgatctcttgacctcgtgatccacccgtcttggcctaccaaagtgctgggattacaggcgtgagccaccgcgcccggcca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55041858 328 + 59248254 caagtgccaccaaacccagctaatttttgtatttt---t--ttgttgttgttcagacggagtctcgctgtgtcacccaggctggagtgcagtggcgcaatctcggctcactgcaacctccacctcctgggttcaagtgattctcctgcctcagcctcccgagcagcggggactacgggtgtgtgccaccacgcctggctaatttttatatttttggtaaagacggggtttcaccatgttggccaggatggtctcgatctcttgaccttgtgatccgcctgcctcggcctcccaaagtgctggaattacaggcgtgagccaccgtgcccggcca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145915 327 + 51301725 caagcgccaccaaacccagctaatttttgta-ttt---t--ttgttgttgttcagacggagtctcgctctgtcacccaggctggagtgcagtggcgcaatctcggctcactgcaacctccacctcctgagttcaagtgattctcctgcctcagcctcccgagcagctgggactatgggtgtgtgccaccatgccaggctaatttttgtatttttggtaaagacggggtttcaccatgttggccaggatggtctcgatctcttgaccttgtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgtgcccagcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46851123 326 + 50890351 caagtgccaccaaacccagctaatttttgtatttt---t--ttgttgttgttcagac--agtctcgctctgtcacccaggctggagtgcagtggcgcagtctcggctcactgcaacctccacctcccgggttcaagtgattctcctgcctcagcctcctgagcagctgggactacgggtatgtgccaccacgccaggctaatttttgtatttttggtaaagacggggtttcaccatgttggccaggatggtctcgatctcttgaccttgtgatccacctgcctcggcctcccaaagtgctggaattacaggcgtgagccaccgtgcccagcca i chlSab2.chr6 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55960536 478 + 60714840 I e calJac3.chr22 45434074 0 + 49145316 C e rheMac3.chr19 60018300 581 + 64156825 M a score=65810.000000 s hg38.chr19_GL949747v2_alt 150831 39 + 729520 tttttgtatttttagtagagatggggtttcaccacgttg s panTro4.chr19 59085499 39 + 63644993 tttttgtatttttagtagagacggggtttcaccaccttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55961014 39 + 60714840 tttttgtatttctggtaaagatggggtttcaccacactg i ponAbe2.chr19 I 478 C 0 s nomLeu3.chr10 102727579 39 - 106955855 tttttgtattttcagtagagacagggtttagccacgttg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55042186 39 + 59248254 tttttgtatttttagtagagatggggtttcaccacattg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47146242 39 + 51301725 tttttgtatttttagtagagatggggtttcaccacattg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46851449 39 + 50890351 gttttgtatttttagtagagatggggtttcaccacattg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45434074 0 + 49145316 C e rheMac3.chr19 60018300 581 + 64156825 M a score=108500.000000 s hg38.chr19_GL949747v2_alt 150870 94 + 729520 gccaggatggtctcgatctcctgaccttgtgatccacccaccttggcctcccaaagtgctgggattacaggtctgagccaccgcgcccagccTC s ponAbe2.chr19 55961053 94 + 60714840 gccaggatggtcttgatctcctgaccttgtgatccacccgccttggcctcccaaagtgctgggattacaggtctgagccaccgcgcccagcctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102727618 92 - 106955855 gccaggatggtcttgatcttctgactttgtgatccacccgtcttggcctcccaaagtgctgggattacaggtgtgagccaccgcgcccATCC-- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55042225 93 + 59248254 gccgagatggtcttgatctcctgaccttgtgatccatctgcctcggcctcccaaagtg-tgagattacaggcgtgagccattgcacccggcctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47146281 93 + 51301725 gccaggatggtcttgatctcctgaccttgtgatccatccgcctcggcctcccaaaatg-tgggattacaggcgtgggccattgcacccggcctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46851488 93 + 50890351 gccaggatggtcttgatctcctgaccttgtgatccatccgcctcggcctcccaaagtg-tgggattacaggcatgggccgttgcacccggcctc i chlSab2.chr6 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45434074 0 + 49145316 C e rheMac3.chr19 60018300 581 + 64156825 M e panTro4.chr19 59085538 0 + 63644993 C a score=34061.000000 s hg38.chr19_GL949747v2_alt 150964 26 + 729520 -tttttttttctttgtaaagatggagt s ponAbe2.chr19 55961147 26 + 60714840 -tttttcttcctttgtagagatggagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102727710 23 - 106955855 ----ttttttctttgtatatatggagt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55042318 25 + 59248254 -tt-ttttttctttgtagagatggcgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47146374 25 + 51301725 -tt-ttttttctttgtagagatggagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46851581 25 + 50890351 -tt-ttttttctttgtagagatggagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45434074 26 + 49145316 ttt-ttttttctttgtagagatgtaat i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e rheMac3.chr19 60018300 581 + 64156825 M e panTro4.chr19 59085538 0 + 63644993 C a score=443611.000000 s hg38.chr19_GL949747v2_alt 150990 211 + 729520 cttgctatgttgacctggctggtctcgaactcctgagcttaagtgatcctctcaccttggcctcccaaaatactggaattacagatgtcagccattgcacctggccAACTCTTGTTTTCTTGAGAAGGGAGGACCATTGGCTTTCTGGTTCTTCAAGAGTGCGGAggctgg-g-tgcaatggc--tggcacctgtaatcccagcactttgggagg s ponAbe2.chr19 55961173 210 + 60714840 cttgctgtgttgccctggctggtctc-aactgctgatcttaagtgatcctctcaccttggcctcccaaaatactggaattacagatgtcagccattgcacctggccAACTCTTGTTTTCTTGAGAAGGGAGGACCATTGGCTTTCTGGTTCTTCAAGAGTGTGGAggctgg-g-tgcaatggc--tggcacctgtaatcccagcactttgggagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102727733 213 - 106955855 cttgctgtgttgccctggctggtctcgaactcctgagcttaagtgatcctctcaccttggcctcccaaaatactggaattacagatgtcagccactgcacctggccAACTCTTGTTTTCTTGAGAAGGGAGGACCGTTGGCTTTCTGGTTCTTCAAGAGTGTGGAggttgg-g-tgcaatggctgtggcacctgtaatcccagcactttgggagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60018881 199 + 64156825 cttgctgtgttgcccaggctggtctcgaactcctgagcttaagtgatcctctcaccttggcctcccaaaatactggaatta-----------caTTGCACCTGGCCAAGTCCTGTTTTCTTGAGAAGGGAAGACCACTGGTTTTCTGGTTCTTCAAGAGTGTGGAggctgg-g--gcaacggc--tggcgcctgtaatcgtggcactttgggagg i rheMac3.chr19 M 581 I 1301 s macFas5.chr19 55042343 199 + 59248254 cttgctgtgttgcccaggctggtctcgaactcctgagcttaagtgatcctctcaccttggcctcccaaaatactggaatta-----------caTTGCACCTGGCCAAGTCCTGTTTTCTTGAGAAGGGAAGACCACTGGTTTTCTGGTTCTTCAAGAGTGTGGAggctgg-g--gcaacggc--tggcgcctgtaatcgcggcactttgggagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47146399 199 + 51301725 cttgctgtgttgcccaggctggtctcgaactcctgagcttaagtgatcctctcaccttggcctcccaaaatactggaatta-----------cattgcacctggccaagtcCTGTTTTCTTGAGAAGGGAGGACCACTGGTTTTCTGGTTCTTCAAGAGTGTGGAGGCTGG-G--GCaatggc--tggcacctgtaatcgcagcactttgggagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46851606 200 + 50890351 cttgctgtgttgcccaggctggtctcgaactcctgagcttaagtgatcctctcaccttggcctcccaaaatactggaatta-----------caTTGCACCTGGCCAAGTCCTGTTTTTTTGAGAAGGGAGGACCACTGGTTTTCTGGTTCTTCAAGAGTGTGGAggctggag--gcaacagc--tggcgcctgtaatcgcagcactttgggagg i chlSab2.chr6 C 0 I 1319 s calJac3.chr22 45434100 201 + 49145316 gttgctgtttt--ccaggctggtcttgaactcctgagcttaagtgatcctctcaccttggcctcccaaagtactggaattacagacgtcagccactgcacctggccAACTCCTGGTATCTTGAGAAGGGAGGACCACTGGCTTTCTGGTTCTTCAGGA---------CCAG-GTTATAgtgcc--ttgcacctgtaatcccagcactttgggagg i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e panTro4.chr19 59085538 0 + 63644993 C a score=2800.000000 s hg38.chr19_GL949747v2_alt 151201 1 + 729520 c s ponAbe2.chr19 55961383 1 + 60714840 c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102727946 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60020381 1 + 64156825 c i rheMac3.chr19 I 1301 C 0 s macFas5.chr19 55042542 1 + 59248254 c i macFas5.chr19 C 0 I 1305 s papAnu2.chr19 47146598 1 + 51301725 c i papAnu2.chr19 C 0 I 1306 s chlSab2.chr6 46853125 1 + 50890351 c i chlSab2.chr6 I 1319 C 0 s calJac3.chr22 45434301 1 + 49145316 c i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e panTro4.chr19 59085538 0 + 63644993 C a score=6790.000000 s hg38.chr19_GL949747v2_alt 151202 3 + 729520 taa s ponAbe2.chr19 55961384 3 + 60714840 taa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102727947 3 - 106955855 taa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60020382 3 + 64156825 taa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55043848 3 + 59248254 taa i macFas5.chr19 I 1305 C 0 s papAnu2.chr19 47147905 3 + 51301725 taa i papAnu2.chr19 I 1306 C 0 s chlSab2.chr6 46853126 3 + 50890351 taa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45434302 3 + 49145316 tga i calJac3.chr22 C 0 I 535 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e panTro4.chr19 59085538 0 + 63644993 C a score=249798.000000 s hg38.chr19_GL949747v2_alt 151205 140 + 729520 aaatacaaagattagtctgtcatggtagcacgtgcctataatcccagctactaggggggctgagacaggaggattgcttgaacctgggagggagaggttgcagtgagccgagatcacgccactgcacttgagcTGTAAAA s ponAbe2.chr19 55961387 140 + 60714840 aaatacaaagattagtctggcacggtggcacgtgcctgtaatcccagctactaggggggctgagacaggaggactgcttgaacctgggagggggaggttgcagtgagccgagatcatgccactgcacttcagcTGTAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102727950 137 - 106955855 aaatacaaagattagtctggcatggtgccacgtgcctgtaatcccagctactaggggggctgagac---aggactgcttgaacctgggagggggaggctgcagtgagctgagatcacgccactgcacttcagcTGTAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60020385 140 + 64156825 aaatacaaagattagcctggcatggtagcacgtgcctgtaatcccaggtactaggggggctgaggcaggaggatagcttgaacccgggagggggaggttgcagtgagccgagatcgtgccacttcacttcagcTGTAAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55043851 140 + 59248254 aaatacaaagattagcctggcatggtagcacgtgcctgtaatcccaggtactaggggggctgaggcaggaggatcgcttgaacccgggagggggaggttgcagtgagccgagatcatgccacttcacttcagcTGTAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47147908 140 + 51301725 aaatacaaagattagcctggcatggtagcatgtgcctgtaatcccaggtactaggggggctgaggcaggaggatcgcttgaacccgggagggggaggttgcagtgagccgagatcatgccacttcacttcagctgtaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46853129 140 + 50890351 aaatacaaagattagcctggcatggtagcacgtgcctggaatcccaggtactaggggggctgaggcaggaggatcgcttgaatccgggagggggaggttgcagtgagccgagatcatgccacttcacttcagcTGTAAAA i chlSab2.chr6 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45434305 535 + 49145316 I e panTro4.chr19 59085538 0 + 63644993 C a score=1354750.000000 s hg38.chr19_GL949747v2_alt 151345 624 + 729520 TAAACAAAAACGATGGAtcctgtgcattttaaggtgtttaggagcatccctggcccccacccacgacatccgactagcaccttccagttacaacaacatgtctccagggattgccatgtgtctcctgggggt---gcagcagcagcacagttgcccccagttgagaagcactTGTCTAAACACTGGGGT-------GCTTTGACCTGGCCTCAGCCCCAGAGC-TTTAAGCGTCATC--TATACCTggccagatgcagtggctcatgcttgtaatctcagcactttgggaggctgagatgggaggactgcttggggccaggag-tttgagaccagcctggtcaacacag---tgagacctcatctctatacattttttaaaaagt-aAAAAAAAAATAATAATAATACTTAAAAAATTTTggccgggcatggtgactcacgcctgtaatcccagcacgttgggaggccgaggcacgcggatcacttgaggccaagagttcgag------accagcctggccaacatggtgaaaccctgcgtctactC----------------------------------------------------TTggcacgagaatca----cttgaacccaggagatggaggttgcagtgagctgagatcacaacactgcactccatcctgggtgacagagcATCAAaatactaata s ponAbe2.chr19 55961527 619 + 60714840 TAAACAAAAACGATGAAtcctgtgcattttaaggtgtttaggagcatccctggcctccccccactacatccgactagcaccttccagttacaacaacatgtctccagggattgccatgtgtctcctgggggt---gcagcagcagcacaattgcccccagttgagaagcactTGTCTAAACACTGGGGT-------GCTTTGACCTGGCCTCAGCCCCAGAGC-TTTAAGTGTCATC--TATACCTggccagatgcagtggctcacgcctgtaatcccagcactttgggaggctgagacgggaggactgcttggggccaggagttttgagaccagcctggtcaacacag---tgagacctcatctctatatattttttaagaagt-aaaaa------aataataataattaaaaaattttggccgggcatggtgactcacgcctgtaatcccagcacgttgggaggccgaggcaggcggatcacttgaggccaagagttcgag------accagcctggccaacatggtgaaaccttgcatctactc----------------------------------------------------ttggcatgagaatca----cttgaacccaagagatggaggttgcagtgagctgagatcacaacactgcactccaccctgggtgacagagcATCAAaataataata i ponAbe2.chr19 C 0 I 194 s nomLeu3.chr10 102728087 617 - 106955855 GAAACAAAAACAATGAAtcctgtgcattctaaggtgtttaggagcatgcctggcctccacccactacatccgactagccccttccagttacaacagcatgtctccagggactgccatgtgtctcctcggggt---gcagcagcagcacaactgcccccagttgagaagcactTGTCTAAACACTGGGGT-------GCTTTGACCTGACCTCAGCCCCAGAGC-TTTAAGCATCATC--TATACCTggccagatgcagtggctcacgcttgtaatcccagcactttgggaggctgagatgggaggactgcttgaggctaggag-tttgagaccagcctggtcaacacag---cgagacctcatctctatatattttttaaaaggt-taaaa------aa-aaaaTTAATTAAAAAATTTTggccgggcatggtgactcacgcctgtaatcccagcactttcggaggccgaggcaggtggatcacttgaggccaagagttcaag------accagcctggccaacatggtgaaaccctgagtctactc----------------------------------------------------ttggcacgagaatca----cttgaacccaggagatggaggttgcagtgagctgagatcacaacactgcactccaccctgggtgacagagcatcaaaataataata i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60020525 630 + 64156825 TAAACAAAAAGGATGAAtcctgtgcattttaaggtgtttaggagcatccctggcctccacccactacatcccactagcaccttccagttaaaacaaaatgtctccagggatttccacgtgtctcctgggggt---gcagcagcagcacaactgcccccagttgagaagcactTGTGTAAACACTGGGGTGCTCTGGGCTTTGACCTGGCCTCAGCCCCAGAGC-TTTAAGTATCACCAGTATA------cgggcatggtgattcatacctgtaatcccggcactttggcaggctgagatgggaggactgcttggggccaggag-tttgagaacagcctggtcaacacag---cgagacctcatctctctgtattttttaaaaagt--aaaaaaaa--aaaaaaattaattaaaaaattttggccagacatggtgattcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacttgaggccaagagttcgatactagcactagcctggccaacatggcgaaaccctgcatctactc----------------------------------------------------ttggcatgagaatca----cttgaacccaggaaatggaggttgcagtgagctgagatcacaccactgcacttcaccctgggtgacaaagcatcaaaataataata i rheMac3.chr19 C 0 I 1075 s macFas5.chr19 55043991 631 + 59248254 TAAACAAAAAGGATGAAtcctgtgcattttaaggtgtttaggagcatccctggcctccacccactacatcccactagcaccttccagttaaaacaaaatgtctccagggatttccacgtgtctcctgggggt---gcagcagcagcacaactgcccccagttgagaagcactTGTGTAAACACTGGGGTGCTCTGGGCTTTGACCTGGCCTCAGCCCCAGAGC-TTTAAGTATCACCTGTATACCTggccagatgcagtggctcatgcttgtaatcctggcactttggcaggctgagatgggaggactgcttggggccaggag-tttgagaacagcctggtcaacacag---cgagacctcatctctctgtattttttaaaaagt-aaaaaaaaa--aaAAAAATTAATTAAAAAATTTTggccaggcatggtgattcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacttgaggccaagagttcgag------actagcctggccaacatggcgaaaccctgcatctactc----------------------------------------------------ttggcatgagaatca----cttgaacccaggaaatggaggttgcagtgagctgagatcacaccactgcacttcaccctgggtgacaaagcatcaaaataataata i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47148048 632 + 51301725 taaacaaaaaggatgAATCCTGCGCATTTTAAGGTGTTTAggagcatccctggcctccacccactacaTCCCACTAGCACCTTCCAGTTAAAACAAAGTGTCTCCAGGGATTGCCACGTGTCTCCTGGGGGT---GCAGCAGCAGCACAACTGCCCCCAGTTGAGAAGCACTTGTGTAAACACTGGGGTGCTCTGGGCTTTGACCTGGCCTCAGCCCCAGAGC-TTTAAGTATCATCTATATacctggccagatgcagtggctcacgcttgtaatcccggcactttgggaggctgagatgggaggactgcttggggccaggag-tttgcgaACAGCCTGGTtaacacag---cgagacctcatctctctatattttttaaaaagtaaaaaaaaaa--aaaaaaattaattaaaaaattttggccaggcatggtgattcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacttgaggccaagagttcgag------actagcctggccaacatggcgaaaccctgcgtCTACTC----------------------------------------------------ttggcatgagaatca----cttgaacccaggaaatggaggttgcagtgagctgagatcacaccactgcacttcaccctgggtgacaaagcatcgaaataatacaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46853269 635 + 50890351 TAAACAAAAAGGATGAAtcctgtgcattttaaggtgtttaggagcatccctggcctccactcactacatcccactagcaccttccagttaaaacaaaatgtctccagggattgccacgtgtctcctgggggt---gcagcagcagcacaattgcccccagttgagaagcactTGTGTAAACACTGGGGTGCTCTGGGCTTTGACCTGGCCTCAGCCCCAGAGC-TTTAAGTATCATCTATATACCTggccagatgcagtggctcacgcttgtaatcccggcactttgggaggctgagatgggaggactgcttggggccaggag-tttgagaacagcctggtcagcacag---cgagacctcatctctctatattttttaaaaagt-gaaaaaaaa--aaaAAAATTAATTAAAAAATTTTggccaggcatggtgactcacgcctgtaaccccagcactttgggaggccgaggcaggcggatcacttgaggccaagagttcgag------actagcctggccaacatggcgaaaccctgcgtctactc----------------------------------------------------ttggcatgagaatcatttgtttgaacccaggagatggaggttgcagtgagctgagatcacaccactgcacttcaccctgggtgacagagcATCGAaataataata i chlSab2.chr6 C 0 I 636 s calJac3.chr22 45434840 676 + 49145316 TAAAC---AAGGATGAgtcctgtgcgtg-taaggtgcttaggagca-ctgtgggctccacccactccatgcccctagtcccttccagttacaacaaaacgtctccaggtattgccccgcgtctcctggaggtgcagcagcagcagcagaatttcccccagttgagaagcgctTGTC-AAACACTGAGGTGCTCTGGGCTTTGATGTGGCCTCAGCCCCAGAGCTTTTAAGTATCATC--TATACCTggctgggcacagtggctcatgcttgcagtcccagcgctttgggaggctgagatgggaggactgcttggggccaggac-tttgagaccagcctagtcaacacaggcctaagtcaacatctctatatattttttaaaaact-aAAAA------AAAAAAATTAATTTAAAAACTTTggtcaggcttggtggctcaagcctgtaattccagcacttcgagaggctgaggtaggtggatcacttgaggccaagagtttgag------actagcctggccaacatggtgaaaccccacatctactaaagataaaaaaattagctgggcgtggtgtcgcacacctgtaatcccagctagttggcaggagaatca----cttgaacccaggatatggaagctgcagtgagctgacgtcgtgccactgcactccaccctggg-gacaaagcgtcaaaa-aataata i calJac3.chr22 I 535 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e panTro4.chr19 59085538 0 + 63644993 C a score=-570.000000 s hg38.chr19_GL949747v2_alt 151969 7 + 729520 ctaatac- s nomLeu3.chr10 102728704 6 - 106955855 ataata-- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55044622 6 + 59248254 acaata-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47148680 5 + 51301725 -caata-- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45435516 5 + 49145316 --aata-c i calJac3.chr22 C 0 I 748 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55962146 194 + 60714840 I e chlSab2.chr6 46853904 636 + 50890351 I e rheMac3.chr19 60021155 1075 + 64156825 I e panTro4.chr19 59085538 0 + 63644993 C a score=4755.000000 s hg38.chr19_GL949747v2_alt 151976 11 + 729520 taatactaata s nomLeu3.chr10 102728710 10 - 106955855 -aaTAATAATA i nomLeu3.chr10 C 0 I 2356 s macFas5.chr19 55044628 10 + 59248254 -aataataata i macFas5.chr19 C 0 I 557 s papAnu2.chr19 47148685 10 + 51301725 -aataataata i papAnu2.chr19 C 0 I 171 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55962146 194 + 60714840 I e calJac3.chr22 45435521 748 + 49145316 I e chlSab2.chr6 46853904 636 + 50890351 I e rheMac3.chr19 60021155 1075 + 64156825 I e panTro4.chr19 59085538 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949747v2_alt 151987 29 + 729520 ctaatactaatactaatactaataataat e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55962146 194 + 60714840 I e calJac3.chr22 45435521 748 + 49145316 I e nomLeu3.chr10 102728720 2356 - 106955855 I e chlSab2.chr6 46853904 636 + 50890351 I e papAnu2.chr19 47148695 171 + 51301725 I e macFas5.chr19 55044638 557 + 59248254 I e rheMac3.chr19 60021155 1075 + 64156825 I e panTro4.chr19 59085538 0 + 63644993 C a score=16934.000000 s hg38.chr19_GL949747v2_alt 152016 106 + 729520 aTCCTTCTTACTCCCAAAACTTACCCTTCCTGGGTCTTCCCCTTCCACATTTATCTAATTAAATTAAATTAAATTAATAATTATTTTTGTTTGttttttgtgtttt s ponAbe2.chr19 55962340 99 + 60714840 atccttcttactcccaaaacttactcctcctgggtcttccccttctACCTTTATCTaattaaattaaattaaattaa--attaTTTTTGtttgttgttt-----tt i ponAbe2.chr19 I 194 C 0 s papAnu2.chr19 47148866 94 + 51301725 ATCCTTCTTACTCCCAAAACTTACCCCTGCTGGGTCTTCCCCTTCCgcctt----taatttaatttaatt-gattaa--ttaattttggcttttttact-----tt i papAnu2.chr19 I 171 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45435521 748 + 49145316 I e nomLeu3.chr10 102728720 2356 - 106955855 I e chlSab2.chr6 46853904 636 + 50890351 I e macFas5.chr19 55044638 557 + 59248254 I e rheMac3.chr19 60021155 1075 + 64156825 I e panTro4.chr19 59085538 0 + 63644993 C a score=1113.000000 s hg38.chr19_GL949747v2_alt 152122 4 + 729520 tttg s ponAbe2.chr19 55962439 4 + 60714840 tttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102731076 4 - 106955855 TCCG i nomLeu3.chr10 I 2356 C 0 s papAnu2.chr19 47148960 4 + 51301725 ttta i papAnu2.chr19 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45435521 748 + 49145316 I e chlSab2.chr6 46853904 636 + 50890351 I e macFas5.chr19 55044638 557 + 59248254 I e rheMac3.chr19 60021155 1075 + 64156825 I e panTro4.chr19 59085538 0 + 63644993 C a score=135518.000000 s hg38.chr19_GL949747v2_alt 152126 202 + 729520 tttgtttgtttttgagacagagtctcgctctgttgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgtctcccgggttcacaccattctcctgcctcagcctccccagtagctgggactacatgcacccgccgccacacccggctaattttttgtatttttagtagagacagggtttcaccgtgtta s ponAbe2.chr19 55962443 195 + 60714840 tttgtttgtttttgagaaagagtctcgctctatcacccaggctggagtgcagtggcgcgatcttggctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcccgagca-------ctacaggcgcccgccgccacactcggctaattttttgtatttttagtagagatggggtttcaccgtgtta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102731080 202 - 106955855 TTAGtttgtttttgagacggagtctcgccctgtcacccacgctggagtgcagtgtcgcgatctcggctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgcgactacaggcgcccgctgccacacccggctaattttttgtatttttagtagagatggggtttcaccgtgtta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55045195 186 + 59248254 tttattttattttgagacgaagtttcgctctgttgcccag----------------gtgatctcagctcactgcaacctctgcctcttgggttcaagtgattctcttgcctcagcctcctgagtagctgggattactggcgcctgccaccatgcccagctaattttctgtatttttagtagagaaggggtttctccatattg i macFas5.chr19 I 557 C 0 s papAnu2.chr19 47148964 195 + 51301725 ------tttttttgagatagagtctt-ttctgttacccaggctggagtgtagtggcgcgatctcagctcaccgcaagctctgcctcctgggttcatgctgttctcctgcctcagcctcccgagcagctgggactacaggcgcccgccacctcgcctggctaattttttgtatttttagtagagacggggtttcaccatgtta i papAnu2.chr19 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45435521 748 + 49145316 I e chlSab2.chr6 46853904 636 + 50890351 I e rheMac3.chr19 60021155 1075 + 64156825 I e panTro4.chr19 59085538 0 + 63644993 C a score=103734.000000 s hg38.chr19_GL949747v2_alt 152328 95 + 729520 gccaggatggtcttgatc------tcctgacctt---gtgacccacccaccttggcctcccaaattgctgggattataggcatgagccaccgtgcccggc------------cTAt s panTro4.chr19 59085538 95 + 63644993 gccaggatggtcttgatc------tcctgacctt---gtgatccacccaccttggcctcccaaattgctgggattataggcatgagccaccgcgcccggc------------cTAt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55962638 92 + 60714840 gccaggatggtcttgatc------tcctgacctt---gtgatccacccaccttggcctcccaaagtgctgggattataggcatgagccaccgcgcccggc------------c--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102731282 95 - 106955855 gccaggatggtctcgatc------tcctgacctt---gtgatccacccacctcggcctcccaaaatgctgggattataggcatgagccaccgtgcccggc------------cTAt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55045381 116 + 59248254 cccaggctggtcttcaccatattgccctgacctcaaagtgatccacctgcctgggcctcccaaattgctgggattacaggtgtgagccaccgcgcctggcTATGAGtttctacttc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47149159 95 + 51301725 gccaggatggtcttgatc------tcctgacctt---gtgatccgcccgtctcggcctcccaaagtgctgggattacagacgtgagccaccgcgcccagc------------ctgt i papAnu2.chr19 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45435521 748 + 49145316 I e chlSab2.chr6 46853904 636 + 50890351 I e rheMac3.chr19 60021155 1075 + 64156825 I a score=415521.000000 s hg38.chr19_GL949747v2_alt 152423 328 + 729520 tttatttta--ttttgagacaaagtctctctctgttgcccaggt----------------gaccttggctcaccgcaacctccgcctcccgggttcaag-tgattctcttgcctcagcctccctagtagctgggattataggcgcccgccaccatgcctagctaattttttgtatttttagtagagaaggggtttctccatattgcccaggctggtcttcaccatattgccctgacctcaagatgatccacctgcctgggcctcccaaactgctgggattacaagtgtgagccaccatgcctggcTATGAGTT-CTACTTCTGttttttttttttttttttttttttt s panTro4.chr19 59085633 317 + 63644993 tttatttta--ttttgagacaaagtctctctctgttgcccaggt----------------gacctcg-ctcactgcaacctccgcctcccgggttcaag-tgattctcttgcctcagcctccctagtagctgggattataggcgcccgccaccatgcctagctaattttttgtatttttagtagagaaggggtttctccatattgcccaggctggtcttcaccatattgccctgacctcaagatgatccacctgcctgggcctcccaaactgctgggattacaagtgtgagccaccacgcctggcTATGAGTTTCTACttct-----------ttttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55962730 308 + 60714840 --TAtttta--ttttgagacgaagtcttgctctgttgcccaggt----------------gacctcggctcactgcaacctctgcctcccgggttcaag-tgattctcttgcctcagcctccctagtagctgggattataggcgcccgccaccatgcctagctaattttttgtatttttagtagagaaggggtttcaccatattgcccaggctagtcttcaccatattgccctgacctcaaggtgatccacctgcctgggcc-cccaaactgctgggattacaagtgtgagccactgcacctggctATGAGtttctacttct------------------ttttttgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102731377 304 - 106955855 tttatttta--ttttgagacgaagtctcgctctattgcccaggt----------------gacctcggctcactgcaacttccgcctcccgggttcaag-tgattctcttgcctcagcttccctagtagctgggattataggcgcccgccaccacgcccggctaatttattgtatttttagtagagacggggtttctccatattgcccaggctggtcttcatcatattgccttgacctcaaggtgatccacctgcctgggcctcccaaactgctgggattacaagtgtgagccacc-------gcTATGAGtttctactttt------------------tttttttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55045497 294 + 59248254 ttttttttt--ttttgagacggagtctcgctctgttgcctaggctggagtgcagtggcgagatgccggctccctgcaacctccacctcccgggttcaag-ccattctcctgcctcagcctcccgagtagctgggactacaggtgcgcaccaccacgcccaggtaattttttgtatttttagtagagatgtggttgcaccatgttaacaaggatggtctcaatc------tcctgacctc---gtgatccgcctgcctcggcttcccaaagtgttgggattacaggcgtgagccaccacgcccggcc------------------------------------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47149254 311 + 51301725 tttatttta--ttttgagacgaagtttcgctctgttgcccaggt----------------gacctcggctcactgcaacctccgcctcttgggttcaag-tgattctcttgcctcagcctcctgagtagctgggattacaggcgcccgccaccatgcccagctaattttctgtatttttagtagagaaggggtttctccatattgcccaggctggtcttcaccATATTGccctgacctcaaagtgatccacctgcctgggcctcccaaactgctgggattacaggtgtgagccaccgcgcctggctatgagtttctacttct------------------tttttttt i papAnu2.chr19 C 0 I 2 s calJac3.chr22 45436269 268 + 49145316 tttattttagtttttgggatgaagtgtcgctcagtcgcccaggc----------------gacctcagctcactgcaacctccacctcctgggttcaagttgattctcttccttcagcctcctgtgtagctgggataacaggcaaccgtcactacgcccagctaactttttgtatttttagtagagaaggggttgcaccatattg------------------------ccctgacctc-aggcgattgacttgcctgggctacccaaaaggctgggattacaggcatgaaccacc-------------------TACtctt------------------ttgttc-- i calJac3.chr22 I 748 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e chlSab2.chr6 46853904 636 + 50890351 I e rheMac3.chr19 60021155 1075 + 64156825 I a score=52018.000000 s hg38.chr19_GL949747v2_alt 152751 24 + 729520 ttttttttttgagacggagtctcg s panTro4.chr19 59085950 24 + 63644993 tttcttttttgagacggagtctcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55963038 24 + 60714840 ttttttttttgagacggagtgtcg i ponAbe2.chr19 C 0 I 2 s nomLeu3.chr10 102731681 24 - 106955855 ttttttttttgagacagagtctcg i nomLeu3.chr10 C 0 I 2 s rheMac3.chr19 60022230 24 + 64156825 tttttcttttgagacaaagtctcg i rheMac3.chr19 I 1075 I 2 s macFas5.chr19 55045791 24 + 59248254 tttttcttttgagacaaagtctcg i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47149567 24 + 51301725 ttttttttttgagacggagtctcg i papAnu2.chr19 I 2 I 293 s calJac3.chr22 45436537 24 + 49145316 gtttgtttttgagacagagtcttg i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e chlSab2.chr6 46853904 636 + 50890351 I a score=78679.000000 s hg38.chr19_GL949747v2_alt 152775 42 + 729520 ctgtcgcccaggctggagtgcagtggcgagatcccagctccc s panTro4.chr19 59085974 42 + 63644993 ctgtcgcccaggttgcagtgcagtggcgacatcccggctccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55963064 42 + 60714840 ctgtcgcccaggctggagtgcagtggcgagatcctggttccc i ponAbe2.chr19 I 2 C 0 s nomLeu3.chr10 102731707 42 - 106955855 ctgttgcccagactggagtgcagtggcgagatcctggctccc i nomLeu3.chr10 I 2 C 0 s rheMac3.chr19 60022256 42 + 64156825 ctgtcgctcagggtggagtgcagtggcatgatctcaggtcac i rheMac3.chr19 I 2 C 0 s macFas5.chr19 55045817 42 + 59248254 ctgtcgctcagggtggagtgcagtggcatgatctcaggtcac i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47149884 42 + 51301725 ctgtcactcaaggtggagtgcagtggcatgatctcaggtcac i papAnu2.chr19 I 293 C 0 s calJac3.chr22 45436561 41 + 49145316 ctgtcgc-caggctggagtgcagtggcacaatctcggctcac i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e chlSab2.chr6 46853904 636 + 50890351 I a score=403425.000000 s hg38.chr19_GL949747v2_alt 152817 149 + 729520 tgcaacctctgcctcccgggttcaagccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccaccacaccagggtaa-ttttttgtatttttagtagagacagcatgtcaccatgttggtcaggctggtctcgaac s panTro4.chr19 59086016 149 + 63644993 tgcaacctctgcctcccaggttcaggccattctcctgccccagcctcccgagtagctgggactacaggcacgcgccaccacaccagggtaa-ttttttgtatttttagtagagacagcgtgtcaccatgttggtcaggctggtctcgaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55963106 149 + 60714840 tgcaacctctgcctcccgggttcaagccattctcctgcctcagcctcccaagtagctgggactacaggcatgcagcaccacacctggctaa-ttttttgtatttttagtagagacagcgtttcaccatgttggtcaggctggtctcgaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102731749 150 - 106955855 tgcaacctccgcctcccgggttcaagccattctcctgcctcagcctcctgagtagctgggactacaggcatgcaccaccacaccagggtaatttttttgtatttttagtagagacagcgtttcaccatgttggtcaggctggtcttgaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60022298 147 + 64156825 tgcaacctccgcctcctgggttcaggcgattctcctgcctcagcctcacaagtagctgggattacaggtgcgcacca-cacgtctggctaa--tttttggatttttagtagagacagggtttcaccatgctggttaggctggtcttgaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55045859 147 + 59248254 tgcaacctccgcctcctgggttcaggcgattctcctgcctcagcctcacaagtagctgggattacaggtgcgcacca-cacgtctggctaa--tttttgcatttttagtagagacagggtttcaccatgttggttaggctggtcttgaac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47149926 147 + 51301725 tgcaacctccgcctcctgggttcaggcgattctcctgcctcagcctcacaagtagctgggattacaggtgcgcacca-cacgtctggctaa--tttttgcatttttagtagagacagggtttcaccatgttggttaggctggtcttgaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46854540 147 + 50890351 tgcaacctccgcctcctgggttcaggcgattctcctgcctcagcctcaccagtagctgggattacaggtgcgcacca-cacgtctggctaa--tttttgcatttttagtagagacagggtttcaccatgttggttaggctggtcttgaac i chlSab2.chr6 I 636 C 0 s calJac3.chr22 45436602 148 + 49145316 tgtaacctctgcctcccaggttcaagcgattttcctgcctcagcctcctgagtagcttagactacaggcgcgcgccaccatgcccagctaa--tttttgtatttttggtagagacagagtttcaccatgttggccaagatggtctcgatc i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I a score=1580714.000000 s hg38.chr19_GL949747v2_alt 152966 499 + 729520 tcctgacctcatgatccacctgcttgggcctcccaaagtgctggg--attccaggc--gtgagctgccgcacccgg-c-tgagtttctgcttctaaaggctgcacagataacagtgtcaagcacagagtctccactcgagaaatattggAAGAATGAAAAACaataaaaatgaatacacagcacgcacttacctgtcaggcctcacattaaatacatttcacattttatcacatttagtccttctatctacctatgaaaccagtaataaatagcattcactccattcaacacttgaggcaactaagaggtcaactaactcctcaaggtttctccataacctggacggccaagattccaggaaggctggctattgagtccACAGGACTCAGTACATTGCTTCTGCTGAGTGAGGctgactttacagaagtagcaa-------------ctgaggccccgagagggggaacgattttacacc----ggcatgctgccactataattagaggcagggcaaaacca s panTro4.chr19 59086165 512 + 63644993 ccctgacctcatgatccacctgcttgggcctcccaaagtgctggg--attccaggc--atgagctgccgcgcccgg-c-tgagtttctgcttctaaaggctgcacagataacagtgtcaagcacagagtctccactcgagaaatattggAAGAATGAAAAACaataaaaatgaatacatagcacgcacttacctgtcaggcctcacattaaatacatttcacattttatcacatttagtccttctatctacctatgaaaccagtaataaatagcattcactccattcaacacttgaggcaactaagaggtcaactaactcctcaaggtgtctccgtaacctggacggccaagattccaggaaggctggctattgagtccACAGGACTCAGTACATTGCTTCTGCTGAGTGAGGCTGACTTTACAGAAGTAGAAAacagaagtagaaactgaggccccgagagggggaacgattttacacc----ggcatgctgccactataattagaggcagggcAAAACCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55963255 500 + 60714840 tcctgacctcataatccacctgcttgggcctcccaaagtgctggg--attccagga--gtgagctgccacgcccggcc-tgagtttctgcttctaaaggctgcacagataacaatgtcaagcacagagtctccactcaagaaatattggAAGAATGAAAAACaataaaaatgaatacatagcacgcacttacctgtcaggcctcacattaaatacacttcacattttatcacatttagtccttctatctacccgtgaaaccagtaataaatagcattaactccatttaacacttgaggcaactaagaggtcaactaactcctcaaggtttctccataacctggacggccaagattccaggaaggctggctattgagtccACAAGACTCAGTACATTGCTTCTGTTGAGTCAGGctgactttacagaagtagaaa-------------cggaggccccgagagggggaacgattttacacc----agcatgctgccactataattagaggcagggcAAAACCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102731899 498 - 106955855 tcctgacctcatgatccacctgcttgggcctcccaaaatgctggg--attccaggc--ctgagctgtcgcgcccggcc-TGAGTTTCTGCTTCTAAAGGCTGCACAGATAATAATGTCAAGCACAGAGTCTCCATTCAATAAATATT-GAAGAATGAAAAACaataaaaatgaatacatagcacgcacttacctgtcatgcctcacattaaatacatttcacattttatcacattcagtccttctatctacctatgaaaccagtaataaatagcattaactccatttaacacttgaggaaactaagaggtcaactaactcctcaaggtttctccataacctggacagccaagattccaggaa-gctgcctattgagtccACAGGACTCAGTACATTGCTTCTGTTGAGGGAGGctgactttacagaagtagaaa-------------ctgaggcccggagagggggaacgattttacacc----agcatgcggccactataattagaggcacggtaaaacca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60022445 498 + 64156825 tcctgacctcatgatccacccacttgggcctcccaaagtgctggg--attccaggc--gtgagctgccgtgcctggcc-TGAGTTTCTGCTTCTAAAGGCTGCACAGATAACAATATTAAGCGCAGAATCTCCACTCAAGAAATACTGGAAGAATGAAAAACaataaaaacgaatacgtagcacgcacttacctgtcaggcctcacattaaatacatttcacattttatcgcatttagttcttctatctacctatgacaccagtaataaatagcattcactccatttaacacttgaggcaactaagaggtcaactaactcctcaaggtttctccataacctggatggccaagattccaggaaggctggctgttgagtccACAGGACTCAGTACATTGCTTCTGTCAAGTGAGGctgactttacagaagtagaaa-------------ctgaggcccagagagggggaatggttttacacc----agcatgctgccac--taatcagaggcagggcaaaacca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55046006 498 + 59248254 tcctgacctcatgatccacccacttgggcctcccaaagtgctggg--attccaggc--gtgagctgccgtgcctggcc-TGAGTTTCTGCTTCTAAAGGCTGCACAGATAACAATATTAAGCGCAGAGTCTCCACTCAAGAAATACTGGAAGAATGAAAAACaataaaaacgaatacgtagcacgcacttacctgtcaggcctcacattaaatacatttcacattttatcgcatttagtccttctatctacctatgacaccagtaataaatagcattcactccatttaacacttgaggcaactaagaggtcaactaactcctcaaggtttctccataacctggatggccaagattccaggaaggctggctgttgagtccACAGGACTCAGTACATTGCTTCTGTCAAGTGAGGctgactttacagaagtagaaa-------------ctgaggcccagagagggggaatggttttacacc----agcatgctgccac--taatcagaggcagggcaaaacca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47150073 498 + 51301725 tcctgacctcatgatccacccgcttgggcctcccaaagtgctggg--attccaggc--gcgaGCTGCCGTGCCCGGCC-TGAGTTTCTGCTTCTAAAGGCTGCACAGATAACAATATCAAGCGCAGAGTCTCCACTCAAGAAATActagaagaatgaaaaacaataaaaacgaATACGTAGCACGCACTTACCTGTCAGGCCTCACATTAAATACATTTCACATTTTATCGCATTTAGTCCTTCTATCTACCTATGACACCAGTAATAAATAGTATTAACTCCATTTAACACTTGAGGCAACTAAGAGGTCAACTAACTCCTCAAGGTTTCTTCATAACCTGGATGGCCAAGATTCCAGGAAGGCTGGCTGTTGAGTCCACAGGACTCAGTACATTGCTTCTGTCAAGTGAGGCTGACTTTACAGAagtagaaa-------------ctgaggcccagagagggggaATGGTTTTACACC----AGCATGCTGCCAC--TAATCAGAGGCAGGGCAAAACCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46854687 498 + 50890351 tcctgacctcgtgatccacccgcctgggcctcccaaagtgctggg--attccaggc--gcgagctgccgtgcccggcc-TGAGTTTCTGCTTCTAAAGGCTGCACAGATAACAATATCAAGTGCAGAGTCTCCACTCAAGAAATACTGGAAGACTGAAAAACaataaaaacgaatatgtagcatgcacttacctgtcaggcctcacattaaatacatttcacattttatcgcatttagtcattctatctacctatgacaccagtaataaatagcattaactccatttaacacttgaggcaactaagaagttaactaactcctcaaggtttctccataacctggatggccaagattccaggaaggctggctgttgagtccACAGGACTCAGTACATTGCTTCTGTCAAGTGAGGctgactttacagaagtagaaa-------------ctgaggcccagagaggcgggatggttttacacc----agcatgctgccac--taatcagaggcagggcaaaacca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45436750 487 + 49145316 tcttgacctcgtgatccacccgcctcggcctcccaaagtgctggg--attacgggc--ttgggc--caAAGCACGGCCATGAGTTTCTACTTAC-AAGGCTGCGCCAAAAACAACGTCTAGC----AGTCTTCACTCAAGAAACATTGGAAGAATGAAAAAAaataaaaactaatagatggcaggcacttacctgtcaggcctcacattaaatacatttcacattctatcgcatttaatcattttatctacctatgaaaccagtaataaaaagcattaactccgttgaatattcgaggcaaccaagaggtcaactaacttctcagggtttctccatcacctagacggctgaaattccaggaaggctggctactgagtccACAGGTCTCAG----TTGCTTCTGTAGACTAAGGctgactttacagaagtagaaa-------------ccgaggctccatgatggggaacta-tttacacc----agcgtgctgccac--taattagaggcagggcaaaacca i calJac3.chr22 C 0 C 0 s canFam3.chr1 19641867 472 - 122678785 TCCTGACCTCAT-------CTGCT---GGTTCTGGGAAagctgagtaacactaggcaggttacctaaccctctgagcc-tcag-ttctacatcataaggttgtaaacatagcagtatctggcacaaagttttcactcaagaaatataagatgaatgatggaa---aAAATCTAATGTATGGT-CACACCCACCTGGCGGGCCCCACAGTGACTACATTTCACACTttatctcccttcatcctcacatcaaactatgaagcaggtaac----atcatgacccccattcaggagttgaggacac----aggtcagctcattcattaaggtttctctgtagttggtagggccaagattccagaaagtctgacca--gagtccatAGGATTCAGTACATTGCTTCTGTCGAATGAGGTTGACAGGacggaagtagaaa-------------ctgaggcccagagagggggaatgatttacctcccagaggaatgc--------gaatcaatggcagggcaaca--- i canFam3.chr1 I 2038 C 0 e mm10.chr7 3678989 4687 + 145441459 I a score=5011941.000000 s hg38.chr19_GL949747v2_alt 153465 1304 + 729520 ggctaaacaaactacaattcccatgAGCCTCCGGGGGCAGGGGCCCAGCCAGGGACGCTGCAGGCTACCCTGG----GGCCTGCTGGGAGATGTAGTTCTGCAGTGTCACCTGAGACTGGGCGGGCTCACTCACCGCAGGACATAGGAACGGGCAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCTGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAAGGAAGCCGCCTTCTCCGGACT-------------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCCTGCTAGTGTCCCAGCCCCGGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCCTCTGGCTGTCAGACTTGCTAGGGCAGCAAGGGAGGGTGGCCCAGAGGGTGCCTGT--AGGGTAGGAAGGTGGGTGG-GCTGGGTGGTACAGTTCACTGACAATGGGGTTCTTCTTCTTTTGGTACCTAATGGGGCCCGCCACAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TT-AGCAACCAAACTCAG-TATATTCAGAGAAGCCGCCAAGGATGGTCCCTTCTAAATTGTC-GGACACTGCAGTTGCCAGGGAAGTTGTGGTTATCATCCCTAATAACAAGGTGCTTCACGGTTGCTAGGGAGATGTTCCAGGCGCCAGTGGGGTCCCCATGATCTTTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAATGCCTAGGATGTTTAGAAAGG-CTTT---TAGGAAGGGGCTTTT----TTCCTGGTCGCAGT-GATTATTGGAGAAGTGTCACCTCTAGCAATA-CAGTGGCTCCCTCATCACTCATGTCGACAGCCCCAGCAGTGGGAAACACT----GGCCCATATGAAGCCTTGGTGGCCTCTGATGACAGGAGGGGAGCCATCCTTTAGGAGTGAGGACCGAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGCTTTACTAGGGGG-ACATCCTCTCTCTAGCAGCTGGAGGTCAGGGCACGGTTATTAGGGCAGTGGTAACAAATTCCCGTGGGGGT-------GTCACTA-CCCCCACAACAGAATGGCAGTTTGTGACGACTAGGGG----A-----CAACCCTAGCAGGGAGTAGTAGTTCATCATTTACATCAACAGGCTGTTCCCCCAGCCGCAGTCCAAGCCCCTGG-GGGAAGGCTGACTGCAGCTGTCAGGAACACAAGGGCAGTCTACTCCTGGTTGCCGG s panTro4.chr19 59086677 1303 + 63644993 GGCTAAACAAACTACAATTCCCATGAGCCTCCGGGG-CAGGGGCCCAGCCAGGGACACTGCAGGCTACCCTGG----GGCCTGCTGGGAGATGTAGTTCCGCAGTGTCACCTGAGACTGGGCGGGCTCACTCACCGCAGGACATAGGAACGGGTAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCTGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAAGGAAGCCGCCTTCTCCGGACT-------------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCCTGCTAGTGTCCCAGCCCCGGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCCTCTGGCTGTCAGACTTGCTAGGGCAACAAGGGAGGGTGGCCCAGAGGGTGCCTGT--AGGGGAGGAAGGTGGGTGG-GCTGGGTGGTACAGTTCACTGACAATGGGGTTCTTCTTCTTTTGGTACCTAATGGGGCCCACCACAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TT-AGCAACCAAGCTCAG-TATATTCAGAGAAGCCGCCAAGGATGGTCCCTTCTAAATTGTC-GGACACTGCAGTTGCCAGGGAAGTTGTGGTTATCATCCCTAATAACAAGGTGCTTCACGGTTGCTAGGGAGATGTTCCAGGCGCCAGTGGGGTCCCCATGATCTTTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAAGGCCTAGGATGTTTAGAAAGG-CTTT---TAGAAAGGGGCTTTT----TTCCTGGTCGCAGT-GATTATTGGAGAAGTGTCACCTCTAGCAATA-CAGTGGCTCCCTCATCACTCATGTCGACAGCCCCAGCAGTGGGAAACATT----GGCCCATATGAAGCCTTGGTGGCCTCTGATGACAGGAGGGGAGCCATCCTTTAGGAGTGAGGACCGAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGCTTTACTAGGGGG-ACATCCTCTCTCTAGCAGCTGGAGGTCAGGGCACGGTTATTAGGGCAGTGGTAACAAATTCACGTGGGGGT-------GTCACTA-CCCCCACAACAGAATGGCAGTTTGTGACGACTAGGGG----A-----CAACCCTAGCAGGGAGTAGTAGTTCATCATTTACATCAACAGGCTGTTCCCCCAGCCGCAGTCCAAGCCCCTGG-GGGAAGGCTGACTGCAGCTGTCAGGAACACAAGGGCAGTCTACTCCTGGTTGCCGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55963755 1304 + 60714840 GGCTAAACAAACTACAATTCCCATGAGCCTCCGGGG-CAGGGGCCCAGCCAGGGAAGCTGCAGGCTACCCTGG----GGCCTGCTGGTAGATGTAGTTCTGCAGTGTCACCTGAGGCTGGGAGGGCTGACTCACCGCAGGACGTAGGAACGGGCAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCTGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAAGGAAGCCGCCTTCTCCGGACTGG-----------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCGCTCCCAACGCCTGCTAGTGTCCCAGCCCCAGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCCTCTGGCTGTCAGAGTTGCTAGGGCAACAAGGGAGGGTGGCC--GAGGGTGCCTGC--AGGGGGGGAAGATGGGTGG-GCCGGGTGCTACAGTTCACTGACAATGGGGTTCTTCTTCTTTTGGTACCTAATGGGGCCTGCCACAGCCATGAAAAGCCTTGAAGGGCTATAGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------GT-AGCAACCAAGCTCAG-TATATTCAGAGAAGCCTTCAAGGATGGTCCCTTCTAAATTGTG-GAACACTGCAGTTGCCAGGGAAGTTGTGGTTATCATCCCTAATAACAAGGTGCTTCACGGTTGCTAGGGAGATGTTCCAGGCACCAGTGGGGTCCCCATGATCTTTGTTGCTAAGGAAAAGGTATTCCTTAGCAACAAGGCCTAGGATATTTAGAAAGG-CTTT---TAGAAAGGGGCTTTT----TTCCTGGTCGCAGT-GACTGTCGGAGAAGTGTCGCCTCTAGCAATA-CAGTGGCTCCCTCATCACTGGTGTCGACAGCCCCAGCAGTGGCAAACACT----GGCCCATATGAAGCCTTGGTGGCGTCTGATGACGGGAAGGGAGCCATCCTTTAGGGGTGAGGACCGAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGCTTTACTAGGGGG-ACATCCTCTCTCTAGCAGCTGGAGGTCAGGGCACGGTTATTAGGGCAGTGGTAACAAAGTCACGTGGGGGT-------GTCACTACCCCCCACAACAGAATGGCAGTTTGTGACGACTAGGGG----A-----CAACCCTAGCAGGGAGTAGTAGTTCATCATTTACATCAACAGGCTGTTCCCCCAGCCGCAGTCCAAGCCCCTGA-GGGAAAGCTGACTGCAGCTGCCAGGAACACAAGGGCAGTCTACTCCCGGTTGCCGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102732397 1296 - 106955855 ggctaaacaaactacaattcccatgagcttccGGAG-CAGGGGCCCAGCCAGGGGAGCTGCAGGCTACCCTGG----GGCCTGCTGGGAGATGTAGTTCTGCAGTGTCACCTGAGGCTGGGCGGGCTCACTCACCGCAGGACATAGGAACGGGTAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCTGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAAGGAAGCCGCCTTCTCCGGACT-------------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGATGCCTGCTAGTGTCCCAGCCCCGGATGCTAACGAAGGGATCCTGGCCAGGCAATCGCCCTCTGGCTGTCAGACTTGCTAGGGCAACAAGGGAGGGTGGCCCAGAGGGTGCCTGT--AAGGGAGGAAGATGGGTGG-GCCGGGTGGTACAGTTCACTGACAATGGGGTTCTTCCTCTTTTGCTACCTAATAGGGCCTGCCACAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TT-AGCAACCGAGCTCAG-TATATTCAGAGAAGCCTCCAAGGATGGTCCCTTCTAAATTGTC-AGACACTGCAGTTGCCAGGGAAGTTGTGGTTATCATCCCTAATAACAAGGTGCTTCACGGTTGCTAGGGAGATGTTCCAGGCGCCAGTGGGGTCCCTATGATCTTTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAAGGCCTAGGATGTTTAGAAAGG-CTTT---TAGAAAGGGGCTTTC----TTCCTGGGCGCAGT-GATTGTTGGAGAAGTGTCGCCTCTAGCAATA-CAGTGGCTCCCTCATCACTTGTGTCGACAGCCCCAGCACTGGGAAACATT----GGCCCATATGAAGCCTTGGTGGCCTCTGATGACGGGAGGGGAGCCATCCTTTACGGGTGAGGACCGAACAGATTTAGAAAAACCTTCAACTCCTGCTTGGCTTTACTAGGGGG--CATCCTCTCTCTAGCAGCTGGAGGTCAGGGCACGGTTATTAGGGCAGTGGTAACAAATTCACGTGGGGCT-------GTCACTA-CCCCCACAACAGAATGGCAGTTTGT---GACTAGGGG----C-----CAACCCTAGCAGGG---AGTAGTTCATCATTTACATCAACGGGCTGTTCCCCCAGCCGCAGTCCAAGCCCCTGG-GGAAAGGCTGACTGCAGCTGCCAGGAACAGAAGGGCAGTCTACTCCTGGCTGCCGG i nomLeu3.chr10 C 0 M 811 s rheMac3.chr19 60022943 1300 + 64156825 ggctaaacaaactacaactcccatgAGCCTCCGGGG-CAGGAGCCCAGCCAGGGAAGCTGCAGGCTACCCTGG----GGCTTGCTGGGTGATGTAGTTCTGCAGTGTCACCTGAGGCTGGTGGGACTCACTCACCGCAGGACATAGGAACGGGCAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCCGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAGGGAAGCCGCCTTCTCCGGACT-------------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCTCTCCCGACGCCTGCTAGTGTCCCAGCCCCGGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCTTCTGGCTGTCAGACTTGCTAGGGCAACAAGGGAGGGGGGCCCAGAGGGTGCCTGT--AGGGGAGGACGATGGTTGG-GCCAGGTGGTACAGTTCACTGACAATGGGCTGCTGCTTCTTTTGGTACCTAATGGGGCCTGCCACAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TTAAGCAACCAAGCTCAG-TATGTTCAGAGAAGCCTCCAAGGATGGTCCCTTCTAAATCGTC-GGACACTGCAGTTGCTAGGGAAGTTGTGATTATCATCCCTCATAACAAGGTGCTTCATGGTTGCTAGGGAGATGTTCCAGGCACCAGTGGGGTCCCCATGATCTTTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAAGGCCTAGGATGTTTAGAAAGG-CTTT---TAGAAAGGGACTTT-----TTCCTGGTCGCAGT-GATTGTTGGAGAAGTGTCACTTCTAACAATA-CAGTGGTTCCCTCGTCACTCATGCCGACAGCCCCAGCAGTGGGAAACGTT----GGCCCATATGAAGCCTTGGTGGCCTCTGATGATGGGAGGGGAGCCATCCTTTAGGGGTGGGGACCCAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGATTCACTGGGGGG-ACATCGTCTCTCTAGCAGCTGGAGATCAGAGCATGGTTATTAGGGCAGTGGTAATAAATTCACGTGGGGGT-------GTCACTA-CCCCCACAACAGAATGGCAGTTGGTGACGACTAGGGG----A-----CAACCCTAGCAGGG---AGTAGTTCATCATTTACATCGACGGGCTGTTCCCCCAGCTGCAGTCCAAGCCCCTGG-GGGAAGGCTGACTGCAGCTGCGAGGAACGCAAGAGCAGTCTACTCCTGGTTGCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55046504 1300 + 59248254 ggctaaacaaactacaactcccatgAGCCTCCGGGG-CAGGAGCCCAGCCAGGGAAGCTGCAGGCTACCCTGG----GGCTTGCTGGGTGATGTAGTTCTGCAGTGTCACCTGAGGCTGGTGGGACTCACTCACCGCAGGACATAGGAACGGGCAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCCGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAGGGAAGCCGCCTTCTCCGGACT-------------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCCTGCTAGTGTCCCAGCCCCGGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCTTCTGGCTGTCAGACTTGCTAGGGCAACAAGGGAGGGTGGCCCAGAGGGTGCCTGT--AGGGGAGGACGATGGTTGG-GCCGGGTGGTACAGTTCACTGACAATGGGCTGCTTCTTCTTTTGGTACCTAATGGGGCCTGCCACAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TTAAGCAACCAAGCTCAG-TATGTTCAGAGAAGCCTCCAAGGATGGTCCCTTCTAAATCGTC-GGACACTGCAGTTGCTAGGGAAGTTGTGATTATCATCCCTCATAACAAGGTGCTTCATGGTTGCTAGGGAGATGTTCCAGGCACCAGTGGGGTCCCCATGATCTTTGTAGCTAAGGAAAAGGCATTCCTTAGCAACAAGGCCTAGGATGTTTAGAAAGG-CTTT---TAGAAAGGGACTTT-----TTCCTGGTCGCAGT-GATTGTTGGAGAAGTGTCACTTCTAACAATG-CAGTGGTTCCCTCGTCACTCATGCCGACAGCCCCAGCAGTGGGAAACGTT----GGCCCATATGAAGCCTTGGTGGCCTCTGATGATGGGAGGGGAGCCATCCTTTAGGGGTGGGGACCCAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGATTCACTGGGGGG-ACATCGTCTCTCTAGCAGCTGGAGATCAGAGCATGGTTATTAGGGCAGTGGTAATAAATTCACGTGGGGGT-------GTCACTA-CCCCCACAACAGAATGGCAGTTGGTGACGACTAGGGG----A-----CAACCCTAGCAGGG---AGTAGTTCATCATTTACATCGACGGGCTGTTCCCCCAGCTGCAGTCCAAGCCCCTGG-GGGAAGGCTGACTGCAGCTGCGAGGAACACAAGAGCAGTCTACTCCTGGTTGCTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47150571 1296 + 51301725 GGCTAAACAAACTACAACTCCCATGAGCCTCTGGGG-CAGGAGCCCAGCCAGGGAAGCTGCAGGCTACCCTGG----GGCTTGCTGGGTGATGTAGTTCTGCAGTGTCACCTGAGGCTGGTGGGACTCACTCACCGCAGGACATAGGAACGGGCAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCCGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAGGGAAGCCGCCTTCTCCGGACT--------------GGGGGTGGAGGATGAGGGTA-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCCTGCTAGTGTCCCAGCCCCGGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCTTCTGGCTGTCAGACTTGCTAGGGCAACAAGGGAGGGTGGCCCAGAGGGTGCCTGT--AGGGGAGGACGATGGGTGG-GCCGGGTGGTACAGTTCACTGACAATgggcttcttcttcttttggtaCCTAATGGGGCCTGCCACAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TTAAGCAACCAAGCTCAG-TGTATTCAGAGAAGCCTCCAAGGATGGTCCCTTCTAAATTGTC-GGACACTGCAGTTGCTAGGGAAGTTGTGATTATCATCCCTCATAACAAGGTGCTTCATGGTTGCTAGGGAGATGTTCCAGGCACCAGTGGGGTCCCCATGATCTTTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAAGGCCTAGGATGTTTAGAAAGG-CTTT---TAGAAAGGGACGTT-----TTCCTGGTCGCAGT-GATTGTTGGAGAAGTGTCACTTCTAACAATA-CAGTGGTTCCCTCGTCACTCGTGCCGACAGCCCCAGCACTGGGAAAC-------GGCCCATATGAAGCCTTGGTGGCCTCTGATGATGGGAGGGGAGCCATCCTTTAGGGGTAGGGACCCAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGATTCACTGGGGGG-ACATCGTCTGTCTAGCAGCTGGAGATCAGAGCATGGTTATTAGGGCAGTGGTAATAAATTCACGTGGGGGT-------GTCACTA-CCCCCACAACAGAATGGCAGTTGGTGACGACTAGGGG----A-----CAACCCTAGCAGGG---AGTAGTTCATCATTTACATCGATGGGCTGTTCCCCCAGCAGCAGTCCAAGCCCCTGG-GGGAAGTCTGACTGCAGCTGCGAGGAACACAAGGGCCGTCTACTCCTGGTTGCCGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46855185 1302 + 50890351 ggctaaacaaactacaactcccatgAGCCTCCGGGG-CAGGAGCCCAGCCAGGGAAGCTGCAGGCTACCCTGG----GGCTTGCTGGGTGATGTAGTTCTGCAGTGTCACCCGAGGCTGGTGGGACTCACTCACCGCAGGACATAGGAACGGGCAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCCGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAGGGAAGCCACCTTCTCCGGACT-------------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCCTGCTAGTGTCCCAGCCCTGGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCTTCTGGCTGTCAGACTTGCTAGGGCAACAAGGGAGGGTGGCCCAGAGGGTGCCTGTAGAGGGGAGGGCGATGGGTGG-GCCGGGTGGTACAGTTCACTGACAATGGGCTTCTTCTTCTTTTGGTACCTAATGGAGCCTGCCGCAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TTAAGCAACCAAGCTCAG-TATATTCAGAGAAGCCTCCAAGGATGGTCCCTTCTAAATCGTC-GGACACTGCAGTTGCTAGGGAAGTTGTGATTATCACCCCTCATAACAAGGTGCTTCATGGTTGCTAGGGAGATGTTCCAGGCACCAGTGGGGTCCCCATGATCTTTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAAGGCCTAGGATGTTTGGAAAGG-CTTTTTCTTGAAAGGGACTTT-----TTCCTGGTCGCAGT-GATTGTTGGAGAAGTGTCACTTCTAACAATA-CAGTGGTTCCCTCGTCACTCGTGCCGACAGCCCCAGCAGTGGGAAAC-------GGCCCATATGAAGCCTTGGTGGCCTCTGATGATGGGAGGGGAGCCATCCTTTAGGGGTGGGGACCCAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGATTCACTGGGGGG-ACATCGTCTCTCTAGCAGCTGGAGGTCAGAGCATGGTTATTAGGGCAGTGGTAATAAATTCACGTGGGGGT-------GTCACTA-CCCCCACAACAGAATGGCAGTTGGTGACGACTAGGGG----A-----CAACCCTAGCAGGG---AGTAGTTCATCATTTACATCGACGGGCTGTTCCCCCAGCTGCAGTCCAAGCCCCTGG-GGGAAGGCTGACTGCAGCTGCGAGGAACACAAGGGCAGTCTACTCCTGGTTGCCGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45437237 1282 + 49145316 ggctaaacaaactacaactcccgtgAGCCTCCGGGG-CAGGGGCCCAGCCAGGGAAGCTGCAGGCTACCCTGG----GGCCTGCTGGGAGATGCGGTTCTGTAGCGTC-CCTGAGGCTGGGCGGGCTCACTCACCGCAGCACATAGGAGCGGGTCGGTGCGCTCTTGTAGATGTACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCCTCGCGCACCCGCGTGCAGAAATCCGTGCCATAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAGGGAAGCCGCCTTCTCCGGACT--------------GGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCCTGCTAGTGTCCCAGCCCCGGATGCTAAGGAAGGGATCCTGGCCAGGCAGTGGCCCTCTGGCTGTCAGATTTGCTAGGGCGACAAGGGAGGGTGGCCGAGAGGGTGCCTGT---CGGGAGGAGGAGGGGTGG-GCCGGGTGGTACTGCTCACCGACAGCGGGGTTCTTCTTGCTTTGGTAACTAACGGGGCCTGCCAGAGCCATGAAAAGCCTTGAAGGGC--TGCTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TT-AGCAACCAAGCTCAG-TATATTCAGAGAAGCCTCCAAGGATGGTCCCTTCTAAACTATT-GGACACTGCTGTTGCTAGGGAAG-------TATCTTCCCTAATAACACGATGATTCACGGTTGCTAGGGAGATGTTCCAGTCGCCAGTGGGGTCTTAATGATCTCTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAGGGCCCAGGATGTTTAGAAAGG-CTTT---TAAAAAAGGGCTTTT----TTCCTGGTCCCAGC-AA----TGTCGAAGTGTCACCCCTAGCAATA-CAGTGGCTCTGTCGTCACTCGTGCCAATAGCCCCAGCAGTGGGAAACGCT----GGCCCACATGAAGACCTGGTGGCCTCTGATGATGGGAGGGGAGCCAT-CTTGAGGAGTGGGGGCCAAGTGGATTTAGCAAAGCCTTCAATTCCTGCTTGGCTTTTCTGGGGGGGACATCCTATCTCTAGCAGCTAGAG-TCAGGGCATGGTTATCAGGGCAGTGGTCATAAACTCACGTGGGGGT-------ATCACTA-CCCCCACAACC-AATGGCAGTTTT---CGACTAGGGATGGCA-----CAACCCTAGCAGGG---GATAGTTCATCATTTACATCAACAGGCTGCTGCCCCAGCCACAGTCCAAG-CCCTGG-GGGAAGGCTAACTGCAGCTGCCAGGAACACAAGGGCAGTCTACTCCTGGTTGCCAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3683676 1222 + 145441459 GGCCCAAGAAACTACAATTTCCATAAGCCTTGGGCC-TTAGGGCCCAGCTAGAGAAGCCCCAGACTACCACAGGTCAGTCATACTGGCAGATAAAGTTCTGCACTGTC-TCTGATACCAGGTGGGCTCCCTCACCTCAAAACGTAGGAGCGGAAAGGTGCGCTCTTGTAGATGTACTGTGCCAGCCACCACTGCACGGTCATGTTCCAGTATCGCATGCCATCCCGCACACGCACGCAGAAGTCTGTGCCATAGCAGTCGATGTTACGGATGGTCTCATAGTCATACTCCAGGGAAGCTGCAATCTCCGGACt--------------gggggtgg-gggtgggggtggagatgaggatggggACAGACATGCAGCTCAGCCAGGCCC-CTCCTGACACCTGCTTCTGTCCCAGCCC--GATGCTAAAGAGGGGGTTCTGGACAGGCTGT----------------GACTTTTGAGGGCCACTGGGTAGGATAGGCCAGAGGGAGTCGGG--------------TAGGTGG--------GGCACAATTCACTAATAGTG------CTGTGCTCTTGGTAACTAGTAGGGCCTGATACAGCCACAGAAATCCTTGGAGAGCTATGGTTGCTAAGCTATCAAGTCCA-------------------------------------------------CT-GGCAACCAAGCTCAGAAATATTGAGAATAGCTTCCAAGTATGGTCCCTTCTGAACTGTG-GGGCAGAGCAGCTGCCAGTAAAGT----------ATCCACTCTAAAAAGGTGGTTCACGGTTGCTAGGGAGATATTCTAGGCCTCG--TGACTCTCAATGATCTCTGTTGCTAGGGAAAAGGCATTCCTTAGCAACAAGGCCCAGGCTGTTCAGAAAAATCTTT---TCAGAAAGGACTTCT----TCCCTGGTCCCTTTCGATTGTTCGAGAAGTGTCCCCTCCAGAAATATCAGAGGTTTTCAGATCTCCGACACCCATACTGTCAGCTATCGATAAAGATGCTAGGCCTATGTGAATGTTCAGCGTCTTCTGGACATGGGAGGGGGACT---------------------TGTAGATTTAAAACAGCATTTAATCTCTGCCTGACTTCACT-GCAGG-ACACCCTCCCTCTAGCAGTGAGTGGTTGATCCATGGTTACTAGGGCAGTGGTAATCAGTTTATATGGGGTGGGGGGCAGCCATTA-CCAC--CAACAGGATAA-------TGACAACCGGGGA-GATA-----CAACCCTACCAAGG---AGTGATCTACAATTTA---GGAGAGGCTG------------CAGTCCCATTCCCCAGCAGGAAGGCTGACAATGGATTCTAGAGACG--------GTTCACTACTGGTTGCTAG i mm10.chr7 I 4687 C 0 s canFam3.chr1 19642339 1336 - 122678785 gcctccagaaactacaactcccgtgactcTATTGGG-AGGAGGCCCGACCGCGGAGCCGGCAGGCAGCCCCAA----GTGCTGCCGGAAGATGTAGTTCCG-AGTTTT-CCCAAGGCGGGCGGG-----CTCACCTGAGAACATAGGAGCGGGCAGGTGCGCTCTTGTAGATATACTGTGCCAGCCACCACTGCACTGTCATGTTCCAGTACCGCATGCCATCCCGCACCCGCACGCAGAAGTCAGTGCCATAGCAGTCGATGTTGCGGATGGTCTCATAGTCGTACTCCAGGGAAGCCGCCTTCTCCGGACTGGGGGTGGGGGGTGGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCTGGCTACTGTCCTAGCCCCAGACACTCAGGAGGGGATCACGGCCAGGCAATAGC--TCTGGCTGTCACATTTGCTAGGGCAACAGGGTTGGGGC-----GGGGGGGCTTTT--CCGGGACTAAGACTAGTGGAGGTGAGGGGCACAGTTCACTGACAATGGGG---TCCTCCTCTTGGTAAC-----AGGGCTGCAACAGCAAGGAAGAGCCTGGAAGAGCTACAGTTGCTAAGCTAT-GAGTCCTTAGCAACCTGATCCTTCACTGGTCTCTGATGCTAGGGAAAGGCCATTCCTT-AGCAACCAAGCTCAC-TATATTCCGAGAAGCTTCCAAGTATGGTCCCTTCTAAGTGGGGAAGATACTGTGGTTGCTAGGGAAG-------TAGCATTCCTAACAATGAGGTGGTCTGTGGTTGCTAGGGAGATGTTCT-GACCCATGTGACACCAGGACAGTCTCTGTTGCTAGAAAAAGGGCATTCCTTAGCAAAAAGGCCTGGGATGTTTAGAAATG-CTTC---CAGAAAGGGCCTTTCCTGGTTATTGGTCCTA-T-GATGACTTAAGAAGTGTCATCTCCAGCAACA-CGGTGGTTCCTGGATCCCTGGTGTCAACATCCCCAACAGTGGTGAACATTCTG-CACCCATCTGAGCCGTTGGTAGTTTCTGATAATGGGATGGGAGCCATCTATTAAAAGTGGGG-CTCAGTAGATTTAGAAAAGCCTTCAGTTTCTGCTTGACATTTTCTGGGAG-ACA--CTCTCTCTAGTAACTGGAGGTCCACTCGTGGTTACCAGGGCAGTGGCTG-AAATTCGTTTGGGGGT-------GCTACTT-CCCCCTTAATGGAATGGCTGTCTGTGACTACTAGGGG----ATGCCCCAATCCGGGCAAGG---AGGAATTCATAATTTACATAGACAGGCTGCTTTGCC-----CAGCCTCAGCCCCAGG-TAGAAGGCCACCCATGTTTGCTAGGAACAGTGGGGCAGTCCATTCCCAGTTGCTAG i canFam3.chr1 C 0 C 0 a score=464674.000000 s hg38.chr19_GL949747v2_alt 154769 183 + 729520 GGGTGCCATCTCCCTAGCAACACGGGGGCAATACTTCCTCAGCCACAAGAGAGTCCACAGCTA-TGGC-------CGTGCGACTTGCCTAGCAATGCAGGTGCCG---------GGGGGTGGAGCCTCTCTGGCAACAAGGGTCAACCCATAGTTTCCAGGGGGAGGTTTGGCTTCCTTAGCAACAGTGTAA-------CTGTAGTT s panTro4.chr19 59087980 183 + 63644993 GGGTGCCATCTCCCTAGCAACACGGGGGCAATACTTCCTCAGCCACAAGAGAGTCCACAGCTA-TGGC-------CGTGCGACTTGCCTAGCAATGCAGGTGCTG---------GGGGGTGGAGCCTCTCTGGCAACAAGGGTCAACCCACAGTTTCCAGGGGGAGGTTTGGCTTCCTTAGCAACAGGGTAA-------CTGTAGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55965059 183 + 60714840 GGGTGCCATTTCCCTAGCAACACGGGGGCAATACTTCCTCAGCCACAGGAGAGTCCACAGCTA-TGGC-------CGTGCGACTTGCCTAGCAATGCAGGTGCTA---------GGGGGTGGAGCCTCTCTGGCAACCAGGGTCAACCCGTAGTTTCCAGGGGGAGGTTTGGCTTCCTTAGCAACAGTGACA-------CTGTAGTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60024243 190 + 64156825 GGGTGCCATTTCCCTAGCAACACGGGGGCAATGCTTCCTTAGCCACAAGAGAGTCCACAGCTA-CGGC-------CGTGCTACTTGCCTAGCAATACCGGTGCTGG--GGGGTGGGGGGTGGAGCCTCTCTGGCAACAAGGGTCAACCCATAGTTACCAGGGGGAGGTTTGGCTTCCTTAGCAACAGTGTAA-------CCGTGGTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55047804 190 + 59248254 GGGTGCCATTTCCCTAGCAACACGGGGGCAATGCTTCCTTAGCCACAAGAGAGTCCACAGCTA-CGGC-------CGTGCTACTTGCCTAGCAATACCGGTGCTGG--GGGGTGGGGGGTGGAGCCTCTCTGGCAACAAGGGTCAACCCATAGTTACCAGGGGGAGGTTTGGCTTCCTTAGCAACAGTGTAA-------CCGTAGTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47151867 196 + 51301725 GGGTGCCATTTCCCTAGCAACACGGGGGCAATACTTCCTCAGTCACAAGAGAGTCCACAGCTA-TGGCCGTGCTACGTGCTACTTGCCTAGCAATACCggtgctgg--ggggt-gggggtggagccTCTCTGGCAACAAGGGTCAACCCATAGTTACCACGGGGAGGTTTGGCTTCCTTAGCAACAGTGTAA-------CCATAGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46856487 190 + 50890351 GGGTGCCATTTCCCTAGCAACACGGGGGCAATACTTCCTCAGCCACAAGAGAGTCCACAGCTA-TGGC-------CGTGCTGCTTGCCTTGCAATACCGGTGCTGG--GGGGTGGGGGGTGGAGCCTCTCTGGCAACAAGGGTCAACCCATAGTTACCAGGGGGAGGTTTGGCTTCCTTAGCAACAGTGTAA-------CCGTAGTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45438519 181 + 49145316 GGGTGCCATTTCCCTAGCAACACAGGGGCAATACTTCCTCAGCCACAGGAGAGCCCACAGGTG-TGGC-------CATGCGACTTGCCTAGCGATGCCGGT--TG---------GGGCATGCAGCCTCTCTGAAAACTAGGGTCAACCCATAGTCACCAGGGGGAGGCCTGGCTTCCTTAGCAACAGTATAA-------CTGGAGTT i calJac3.chr22 C 0 C 0 s mm10.chr7 3684898 157 + 145441459 GGATACCATTTCCCTATCAACA-AGGACTGATGCTTGCTAAGTAGTAAGAA---CCGTAGTTACTAGT-------TTTGTGACGTTCTCAGCTATGATGGCGCTG---------GCGCTTGGGGTAGCTTTACTGGTAAAGGGAAAGCCTCAGCAATCGGGG-----------------------AAGACAA-------CCGTGGTT i mm10.chr7 C 0 C 0 s canFam3.chr1 19643675 187 - 122678785 GAGCATCATTTCCCTAGCAACACAGGGGCAACACTTCCTTAGCAACAAGAT-GCCCCTAGTTACTGGC-------AGTGTGACCTACCCAACAACTAAAGAAAGGGGTGAGGTGAGGGCTGCAGCAT---TGCCAACAA-GGTCACTCCATAGTTACCAGGGTATG--------TCCTTGGCAACGGTAGGAAAGTGACCTGCGGTG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102733693 811 - 106955855 M a score=1804407.000000 s hg38.chr19_GL949747v2_alt 154952 529 + 729520 GGTAGGAATGGCGTGCCCTCT---GC-TGGGGAACAGCACTGGTCAGGGATTGGAAATTGCTATTTCCTTG----CAGAGGGCTGCTGAGGGCTGCTATGTGAGGACATCCCAC--GGGGTGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GGGCAGTGCAGGGAGTGCCGTATCTGCAGCAAC--AGAGCAAAACTTCTGGTAAAAAGGAGGTGAGCTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAATAGTGGCGTTCT-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTAGCAAAGGATGGCATCCCCAGCAAGCAGGAACAATCTGGTTCT-GGGGGGTGACACTTCTGTGGCAACAGAGGGGTGGCACAGGGTTGCTAAGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCACACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----ATCTTTTCCCTACCGACAGGGGCTGGCAGGCCATGGTTGCCGAGGGGGCGACAC s panTro4.chr19 59088163 529 + 63644993 GGTAGGAATGGCGTGCCCTCT---GC-TGGGGAACAGCACTGGTCAGGGATTGGAAATTGCTATTTCCTTG----CAGAGGGCTGCTGAGGGCCGCTATGTGAGGACATCCCAC--GGGGTGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GGGCAGTGCAGGGAGTGCCATATCTGCAGCAAC--AGAGCAAAACTTCTGGTAAAAAGGAGGTGAGCTACTGTTGCCAGGGATCCTGCTTCCCTAGCAAATAGTGGCATTCT-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTAGCAAAGGATGGCATCCCCAGCAAGCAGGAACAATCTGGTTCT-GGGGGGTGACACTTCTGTGGCAACAGAGGGGTGGCACAGGGTTGCTAAGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCACACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGCCAGTACCAGGG----ATCTTTTCCCCACCGACAGGGGCTGGCAGGCCGTGGTTGCCAAGGGGGCGACAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55965242 529 + 60714840 GGTAGGAATGGCGTGCCCTCT---GC-TGGGGAACAGCACTGGTCAGGGATTGGAAATTGCTATTTCCTTG----CAGAGGGCTGCTGAGGGCTGCTATGTGACGACATCCCAC--GGGCTGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GGGCAGTGCAGGGGGTGCCATATCTGCAGCAAC--AGAGCAAAACTTCTGGCAAAAAGGAGGTGAACTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAATAGTGGCGTTCT-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTAGCAAAGGATGGCATCCCCAGCAAGCAGGAACAATCTGGTTCT-GGGGGGTGACACTTACGTGGCAACAGAGGGTTGGCACAGGGTTGCTAAGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCATACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----GTCTTTTCCCTAAGGACAGGGGCTGGCAGGCCGTGGTTGCCAAGGGGGCGACAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102734504 514 - 106955855 GGTAGGAATGGC-TGCCCTCT---GC-T-GGGAACAGCACTGGGCAGGGATT-GAAATCGCTATTTCCTTG----CAGAGGGCT----------GCTATGTGAGGACATCTGAC--GGGGTGGAGCA---GTGCTACCTCCTAGCAACAAAAG-GGGCAGTGCAGGGGGTGCCATATCTGCAGCAAC--AGAGCAAAACTTCTGGCAAAAAGGAGGTGAACTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAACAGTGGCGTTCC-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTAGCAAAGGATGGCATCCCCAGCAAGCAGGAACAATCTGGTTCTGGGGGGGTGACACTTGCGTGGCAACAGAGGTGTGGCACAGGGT---TAAGTCACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCATACTGTGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----GTCTTTTCCCTACCGACAGGGGCTGGCAGGCTGTGGTTGCCAAGGGGGCGACA- i nomLeu3.chr10 M 811 C 0 s rheMac3.chr19 60024433 535 + 64156825 GGTAGGAATGGCATGCCCTCT---GC-TGGGGAACAGCACTGGTCAGGGATTGGAAATTGCTATTTCCTTGCAAACAGAGGGCAGCTGAGGGCTGCCATGTGAGGATATCCCACATGGGATGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GTGCAGTGCAGGGGGAGCCATATCTGCAGCAAC--AGAGCAAAACTCCTGGCAAAAAGGAGGTGAACTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAATAGCAGTGTTCC-GTTGCTAGGGAACCGTTTACCTAGCAACAGAGGGT-GA---CCCACCACTACCAAAGGATGGCATCCCCAGCAAGCAGGAACAACCTGGTTCT-GGGGGGTGACACTTCCGTGGCAACAGAGGGGTGGCACAGGGTTGCTAAGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCATACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----GTCTTTTCCCTACCGACAGGGGCTGGCAGGCCGTGGTTGCCAAGGGGGCGACAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55047994 535 + 59248254 GGTAGGAATGGCATGCCCTCT---GC-TGGGGAACAGCACTGGTCAGGGATTGGAAATTGCTATTTCCTTGCAAACAGAGGGCAGCTGAGGGCTGCCATGTGAGGATATCCCACATGGGATGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GCGCAGTGCAGGGGGAGCCATATCTGCAGCAAC--AGAGCAAAACTCCTGGCAAAAAGGAGGTGAACTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAATAGCAGTGTTCC-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTACCAAAGGATGGCATCCCCAGCAAGCAGGAACAACCTGGTTCT-GGGGGGTGACACTTCCGTGGCAACAGAGGGGTGGCACAGGGTTGCTAAGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCATACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----GTCTTTTCCCTACCGACAGGGGCTGGCAGGCCGTGGTTGCCAAGGGGGCGACAC i macFas5.chr19 C 0 I 6096 s papAnu2.chr19 47152063 533 + 51301725 GGTAGGAATGGCATGCCCTCT---GC-TGGGGAACAGCACTGGTCAGGGATTGGAAATTGCTATTTCTTTGCAAACAGAGGGCAGCTGAGggctgccatgtgaggatatcCCAC--GGGATGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GCGCAGTGCAGGGGGAGCCATATCTgcagcaac--agagcaaaacttctGGCAAAAAGGAGGTGAAGTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAATAGCAGTATTCC-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTACCAAAGGATGGCATCCCCAGCAAGCAGGAACAACCTGGTTCT-GGGGGGTGACACTTCCGTGGCAACAGAGGGGTGGCACAGGGTTGCTAGGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCATACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----GTCTTTTCCCTACCGACAGGGGCTGGCAGGTCGTGGTTGCCAAGGGGGCGACAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46856677 532 + 50890351 GGTAGGAATGG-ATGCCCTCT---GC-TAGGGAACAGCGCTGGTCGGAGATTGGAAATTGCTATTTCCTTGCAAACAGAGGGCAGCTGAGGGCTGCCATGTGAGGATATCCCAC--GGGATGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GCGCAGTGCAGGGGGAGCCATATCTGCAGCAAC--AGAGCAAAACTTCTGGCAAAAAGGAGGTGAACTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAACAGCAGTGTTCC-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTACCAGAGGATGGCATCCCCAGCAAGCAGGAACAACCTGGTTCT-GGGGGGTGACACTTCCGTGGCAACAGAGGGATGGCACAGGGTTGCTAAGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCATACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----GTCTTTTCCCTACCGACAGGGGCTGGCAGGTCGTGGTTGCCAAGGGGGCGACAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45438700 490 + 49145316 GCTAGGAATGGCATCAGCTCT---GC-TGGGTAACAGCA---GGTGGGGATTTGAAATTGCTATTTCCTTT----CAAAGAGC--------GCAGCTACTTGACCACATCCCAT--GAGATGGAGGA---GGGCTAGCTCCTAGAAAC-AGAG-GGGTGGTGCAGGGGGTGCCGTATCTGCAGCAAC--AGAGCAAAACTTCTGGCAAGAAGGAGGTGAACTACTGTTGCTAGGGACCCTGCTTCCCTGGCAG--AGTGGTGTTCG-GTTGCTAGGTAACTGTTTCCCTAGCAACAGAGGGT-GA---CCCGCCACTACCAAAGGATGGCATCCCCAGCAAGCAGGAACAATCTGGTTCT--GGGGGTGACACTTCCGTGGCAACAGAGGGGTGGCACAGTGTTGCTAAGTTACCA----CATTTTCCTAGCAATGCGGGGGGGGGGTTCAGTTCACCATACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCATTACCAGGG--TTTTTTTTTCCCTATCGACAG----------------------------------- i calJac3.chr22 C 0 C 0 s mm10.chr7 3685055 503 + 145441459 GCTGAGAAAGG--TGCTCTCCACAGC-TGGAGGAGAGCA---GCCAAAGAT--------GTTACTTCCTTACA--AATAGGGCAACTGGGAGGTGCTGTGTGAGAACATCCCAT--GG---TGAGC-----TGCTCGCTCTAAGCAAG-GCAG---GCAGTTCA--------CAAACAGGCACAAAC----AGCAGGGCTCTCAGCAGTAAG-----GAACCAAGGTTGCTAGGGATATAGCATTCTCAGCACA-GGGGCTGTTCA-ATTGCTAAGGAATGGTTTCCCTAAACACAGATGATGGA---CCCACTACTACCAAAGGATAGTATCTCTAGCAACTGGGAACAGCCTGGATCT--TGGGGTGACTCTTCCATAGCAACACAGGGTAAGCATGTGGTTGCTAAGATACTATTTTCCTTTCCCTAGCAATAGAGGA--------CAATTAGCCATACTGAGGGGTGACAAAT----GCAACAAGGGGCAATCTGTAGGTACCAGAAACACATAGTTTCCCTAGTGGCCAGGGAAGGCAGGTGATAGTCACCAGGGGGGCAATAC i mm10.chr7 C 0 C 0 s canFam3.chr1 19643862 502 - 122678785 GCTAGGAGTGCCATCCCCTCT---GTGCAGAGGGCAGCA-TGGTCAGGGAT--------GCCATTTGCTTA----GAAGGTGCA------GGCTGCT-----AGTACAGCCCAT--GGTTGGGTGTGTGTGTGCTGGCTTCTAGCCAC-AGAGAGAGGTTTAAAGGGGATGCTATTTACACAGCAATGAAAAGCAAGTCTTGTGGCTGGAAGG-GGCAGGCCACGGTTACTAGGGA-AGTGCTTCTCTGGCATAGAGGGGCAGTCTAGTTGCCAGGGTACCATTTCCCTAGCAACAAAGGGT-GGGGCCCCATCACAGCCCAAAGATGGTATCTGGAGTAACCAGGAACAACCGAGTTAC--CAGGGTAACACTTCCATGGCAACAGAAGGGCAGTGCATGGTTGCTAAAAGACCATCTTCCCTCTCCTAACAACAGAGAG--------CAGTTCGCCATCCCAAGAGGTGACAAGCAGTAGC-ACAAGGGGC-AGTGGAAGGTATGGGGA----GTATTGCTCCCTAGGACAGGGGTAGGT------------------GGGCGACAC i canFam3.chr1 C 0 C 0 a score=171233.000000 s hg38.chr19_GL949747v2_alt 155481 59 + 729520 TCTGCTCA---AAAAGGTGGTGGCCCTGGCCCCTTGCTCCCCGCTCTCCTCCCGGCTAGGGG s panTro4.chr19 59088692 59 + 63644993 TCTGCTAA---AAAAGGTGGTGGCCCTGGCCCCTTGCTCCCCGCTCTCCTCCCTGCTAGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55965771 60 + 60714840 TCTGCTAA-C-AAAAGGTGGTGGCCCTGGCCCCTTGCTCCCCGCTCTCCTCCCTGCTAGGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102735018 56 - 106955855 -CTGCT-----AAAAGGTGGTGGCCCTGGCCCCTTGCTCCCCGCTCTCCTCCCTGCTAGGGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60024968 61 + 64156825 TCTGCTAA-CAAAAAGATGGTGGCCCTAGCCCCTTGCTCCCCGCTCTCCTCCCTGCTAGGGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47152596 61 + 51301725 TCTGCTAA-CAAAAAGATGGTGGCCCTGGCCCCTTGCTCCCCGCTCTCCTCCCTGCTAGGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46857209 61 + 50890351 TCAGCTAA-CAAAAAGATGGTGGCCCTGGCCCCTTGCTCCCCGCTCTCCTCCCTGCTAGGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45439190 58 + 49145316 ----CTAAACAAAAGGGTGGTATCCCTGCCCCCTTACTCCCCGCTCTCCTCCCTGCTAGGGG i calJac3.chr22 C 0 I 584 s mm10.chr7 3685558 52 + 145441459 GCTGCCAA-C-CACTGCTGGTAGCCC--------TACACCCTGCTCCCTTCCCTACTAGGGG i mm10.chr7 C 0 C 0 s canFam3.chr1 19644364 60 - 122678785 TCTTCTGA-C-AACAGGTGATGAACCTGCTCCCTTGCTCCCCACTCTCCTCCCTGCTAGGGG i canFam3.chr1 C 0 C 0 e macFas5.chr19 55048529 6096 + 59248254 I a score=1522570.000000 s hg38.chr19_GL949747v2_alt 155540 371 + 729520 CAGAGCCAGCCCTTGGAGGTGGGGGCTGCTGGGTCTTGGGAAGCCTCCCTCGCGCCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTGGGGCCGCCTCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCAAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAggcgggcgggcagcgggcgggcgTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGAGAGGAGAGCAGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACTGCCCC s panTro4.chr19 59088751 371 + 63644993 CAGAGCCAGCCCTTGGAGGTGGGGGCTGCTGGGTCTTGGGAAGCCTCCCTCGCGCCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTGGGGCCGCCTCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCAAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAGGCGGGCGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGAGAGGAGAGCAGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACCGCCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55965831 371 + 60714840 CAGAGCCTGCCCTTGGAGGTGGGGGCTGCTGGGTCTTGGGAAGCCTCCGTCGCGCCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTGGGGCCGCCTCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCAAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAGGCGGGCGGGCAGCGGGCGGGCGTAGAAAGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGAGAGGAGAGCAGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACGGCCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102735074 371 - 106955855 CAGAGCCAGCCCTTGGAGGTGGGGGCTGCTGGGTCTTGGGAAGCCTCCCTCGCGCCGCCTGACCTGCTAGGGGGTGGGCATTGGAGGGTGGGGCCGCCTCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCAAAGCCAGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAGACGGGCGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGAGAGGAGAGCAGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACGGCCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60025029 371 + 64156825 CAGAGCCAGCCCTGGGAGGTGGGGGCTGCTGGGTCTTGGGAAGCCTCCCTCGCGCCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTggggccgcccccggcccgggcTTTGGCGGCCACGGGGTAGGCCCCGAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAGGCGGGCGGGCAGCGGACGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGGGAGGAGAGCAGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACGGCCCC i rheMac3.chr19 C 0 I 1155 s papAnu2.chr19 47152657 371 + 51301725 CAGAGCCAGCCCttggaggtgggggctgctggGTCTTGGGAAGCCTCCCTCGCACCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTGGGGCCGCCCCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCGAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAGGCGGGCGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCgggaagaggtgggaggagagcaGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACGGCCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46857270 371 + 50890351 CAGAGCCAGCCCTTGGAGGTGGGGGCTGCTGGGTCTTGGGAAGCCTCCCTCGCGCCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTGGGGCCGCCCCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCAAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAGGCGGGGGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGGGAGGAGAGCAGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACGGCCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45439832 371 + 49145316 CAGAGCCAGCCCTTGGAGGTGGGGGCCGCTGGGTCTTGGGAAGCCTCCCTCCCGCCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTGGGGCCACCCCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCGAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAACAGGCGGGCGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGGGAGGAGAGCAGGAACAGCAGGCCGAAGAGAGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACGGCCCC i calJac3.chr22 I 584 C 0 s mm10.chr7 3685610 371 + 145441459 CAGAGCCAACCCTTGGTGGTGGGGCCTGCTGGGTCTTGGGAAGCCTCCCTCCCGCCGCCTGACCTGCTAGGGGGTGGGCATTGGAGGGTggggccgcccccggcccgggcTTTGGCAGCCACAGGGTAGGCCCCGAAGCCCGCGGCAATGCAACCGCACTCGGCCGCAATCCAGGCAACGTAGAAGCGCATGCGGAAGGCGAAGAAGACCGGGATCATGTAGAAGAGGCGGGTGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCACGCACAGCTTCCAGTGGGAAGAGATGGGAGGACAGCAGGAAGAGCAGGCCAAAGAGCGGGGCTGGCCAGGCGCGGCGCAGCAGGGGCCTCAGGCTGGGCACGGCTTC i mm10.chr7 C 0 C 0 s canFam3.chr1 19644424 371 - 122678785 CATGACCAGCCTGTGGTGATGGGGCCTGCCGGGTCTTGGGAAGCCTCCCTCCCACTGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTggggccgcccccggcccgggccTTGGCGGCCACAGGGTAGGCCCCGAAGCCGGCAGCAATGCAGCCGCACTCAGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGAATCATGTAGAAGAGGCGGGCGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGTGAGGACAGCAGGAATAGCAGCCCGAAGAGGGGGGCCGGCCAGGCTCGGCGCAGGAGGGGCCGCAGGCTGGGCACGGCTCC i canFam3.chr1 C 0 C 0 e macFas5.chr19 55048529 6096 + 59248254 I a score=572975.000000 s hg38.chr19_GL949747v2_alt 155911 276 + 729520 GGGGAAGGGCTGCTCCAGCCAGTCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGT----GGGGCGGGGAGGGAGGGCCGC-GGTCAGA--------------------CA----------GGCAGGTGGGCAGAGCTCAAGTCTG-----CAGGAG----GAGGACAGGGAGCT-TGGAAGGAAGGTGGGAAGA--------GGGAGTGAGAGGGGCAGAGACTGGGCGCC-GGGGAGACCCCAAGGGTAGG--GACTGAGACCCTGAGAGATGGGGATAAGGAACGAGAGACAGGGGGGACAAGAA-ACTCAGagagacagagacagtaa s panTro4.chr19 59089122 274 + 63644993 GGGGAAGGGCTGCTCCAGCCAGTCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGT----GGGGCGGGGAGGGAGGGCCGC-GGTCAGA--------------------CA----------GGCAGGTGGGCAGAGCTCAAGTCTG-----CAGGAG----GAGGACAGGGAGCT-TGGAAGGAAGGTGGGAAGA--------GGGAGTGAGACGGGCAGAGACTGGGCGCC-GGGGAGACCCCAAGGGTAGG--GACAGAGACCCTGAGAGATGGGGATAAGGAACGAGAGACA--GGGGACAAGAA-ACTCAGAGAGACAGAGACAGTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966202 275 + 60714840 GGGGAAGGGCTGCTCCAGCCAGTCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGT----GGGGCGGGGAGGGAGGGCCGC-GGTCAGA--------------------CA----------GGCAGGTGCGCAGAGCTCAAGTCTG-----CAggag----gaggagagggagct-tggaaggaaggtgggagga--------gggagtgag-ggggcagagactgggcgcc-ggggagaccccaagggtagg--gacagagagcctgagagatggggataaggaacgagaggcagggaggACAAGAA-ACTCAGagagacagagacagtga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102735445 275 - 106955855 GGGGAAGGGCTGCTCCAGCCAATCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGT----GGGGCGGGGAGGGAGGGCCGC-GGTCAGA--------------------CA----------GGCAGGTGGGCAGAGCTCAAGTCTG-----CAGGAG----GAGGAGAGGGAGCT-TGGAAGGAAGGTGGGAAGA--------GGGAGTGAGAGGGACAGAGA-TGGGCGCC-GGGGAGGCCCCAAGGGTAGG--GACAGAGACCCTGAGAGATGGGGATAAGGAAAGAGAGACAGGGGGGACAAGAA-ACTCAGAGAGACAGAGACAGTGA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47153028 275 + 51301725 CGGGAAGGGCTGCTCCAGCCAGTCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGT----GGGGCGGGGAGGGAGGGCCGC-CGTCAGA--------------------CA----------GGCAGCTGGGCAGAGCTCCAGtctg-----caggag----gaggagagggagct-tggagggaaggtgggaaga--------gggagagagaggggcagagactgggcgcc-ggggagaccccaggggtagg--gacagagacccagagagatggGGATAAGGAACgagagaca-gggggacaagaa-actcagagagacagagacagtga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46857641 271 + 50890351 CGGGAAGGGCTGCTCCAGCCAGTCCAGGTAGGTGCGGTAGCGGAAGAATGGGCCTGT----GGGGCGGGGAGGGAGGGCCGC-CGTCAGA--------------------CA----------GGCAGGTGGGCAGAGCTCTAGTCTG-----C---AG----GAGGAGAGGGAGCT-TGGAGGGAAGGTGGGAAGA--------GGGAGAGAGAGGGGCAGAGACTGGGCGCC-GGGGAGACCCCAAGGGTAGG--GACAGAGACCCAGAGAGATGGGGATAAGGAACGAGAGACA--GGGGACAAGAA-ACTCAGAGAGACAGAGACAGtga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45440203 269 + 49145316 CGGGAAGGGCTGCTCCAGCCAGTCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGT----GGGTCAGGGAGGGAGGGCAGC-AGTCAGA--------------------TG----------GGCAGGTGGGCAGAGCTCGAGTCTG-----C---AG----GAGGAGAAAGAGCT-TGGAGGGCAGGTGGGAAGA--------GGAATAGAGA--GGCAGACACTGGGTGCCGGGGGAAACCCcaggggtagg--gacagagacccagagagatggggacaaggaaggagatg----ggggacaacaagactcggagagacagagacagtga i calJac3.chr22 C 0 C 0 s mm10.chr7 3685981 286 + 145441459 CGGGAAGGGCTGTTCCAGCCAATCCAGGTAGGTGCGGTAGCGGAAGAATGGGCCTGT----GGAGGGTGGCAAGGAGCAGGT-GGTTGGATGCTGTGTATCTGAGCCTACTg----------gggaggtgg---gaggtgaaa---g-----gaggag----gaggatggagagat-gggaaaaggggggaggaga--------gtaagcagaagagttggggacagaa-----ggggagATATGGAGAGCTGGTAAACGAGGGCCaagggaagggaagggaaggggggggaggggaggggGgagagag-a--gagagagacagagagacaga i mm10.chr7 C 0 C 0 s canFam3.chr1 19644795 303 - 122678785 CGGGAAGGGCTGCTCCAGCCAATCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGTGGCAGGAGGGAGGAGGGAGGGTGGCTGGTCAGA--------------------CATCCCTGGCTGGGAGGGTGGCCACAGCTAGTGTCTGACGTCCGGGGGGCCTGAGACTGGGGAGCTGCGGGGAGAGGGTTATGAAACCTCCAACAGGAGGAAGGAGGCCAGAGGCCTGAGATT-ggggagatg-gggggggagg--ggcgagga---ggagggagaggggTCTGAAACCCAGAACA--AGGGGAGTGAC-ACTCAGAGAAAAAAGGACAAGAA i canFam3.chr1 C 0 I 1485 e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=43831.000000 s hg38.chr19_GL949747v2_alt 156187 29 + 729520 cagaaaaacagacagagGgg--ccggtgcgg s panTro4.chr19 59089396 25 + 63644993 CAGAAAA----ACAGAGGgg--ccggcgcgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966477 29 + 60714840 cagaaaaacagacagagGgg--ccggcgcgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102735720 29 - 106955855 CAGAAAAACAGACAGAGGgg--ccggcgtgg i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47153303 29 + 51301725 cagaaaattagaaagagggg--ctggcgcgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46857912 29 + 50890351 cagaaaattagaaagagggg--ccggcgcgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45440472 31 + 49145316 cagGAAATTAGATAGTGGGggccaggcgcgg i calJac3.chr22 C 0 C 0 s mm10.chr7 3686267 29 + 145441459 gagagacagagacagagagg--ggggtaggg i mm10.chr7 C 0 I 1637 e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=403767.000000 s hg38.chr19_GL949747v2_alt 156216 230 + 729520 tggctcacacctggaatcccagcactttgggaggcctagctgggaggactgcttgagcccaacagttggacagcagcctgggcaaaacggcaagaccccatcactacaaaaaataaaaatcagccaggt---gtggagggcacctgaattcccagctactggggaggctgaggcgggaggatcgtttgagcccaggctgcagtgagcagtgactgagctactgcattccagcc s panTro4.chr19 59089421 230 + 63644993 tggctcacacctggaatcccagcactttgggaggcctagctgggaggactgcttgagcccaacagttggagagcagcctgggcaaaacggcaagaccccatcactacaaaaaataaaaattagccaggt---gtggagggcacctgaattcccagctactggggaggctgaggcgggaggatcgtttgagcccaggctgcagtgagcagtgactgagctactgcattccagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966506 232 + 60714840 tggctcacacctgcaatcccagcactttgggaggcctagctgggaggactgcttgagcccaacagttcgaggccagcctgggcaaaacggcaagaccccatcactacaaaaaataaaaattagccaggtgtggtggagggcacctgaattccgagctac-ggggaggctgaggcgggagaatcgtttgagcccaggctgcagtgagcagtgactgtgctactgcgttccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102735749 233 - 106955855 tggctcacacctggaatcccagcactttgggaggcctagctgggaggactgcttgagcccaacagttcgagaccagcctgggcaaaacggcaagaccccatcactacaaaaaataaaaattagccaggtgtggtggagggcacctgaattcccagctactggggaggctgaggcaggaggatcgtttgagcccaggctgcagtgagcagtgactgtgctactgcgttccagct i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47153332 233 + 51301725 tggctcacacctggaatcccagcactttgggaggcctagctgggaggactgcttgagcccaagagttcgagaccagtctgggcaaaatggcaagaccccatcactacaaaaaataaaaattagccaggtgtggtggagggcacctgtaatcccagctactgggggggctgaggcgggaggatcgtttgagcctaggctgcagtgagcagtgactgTGCTACTGCGTTCcagct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46857941 233 + 50890351 gggctcacacctggaatcccagcactttgggaggcctagctgggaggactgcttgagcccaagagttcgagaccagtctgggcaaaacggcaagaccccatcactacaaaaaatgaaaattagctaggtgtggtggagggcacctgtaatcccagctactgggggggctgaggcgggaggatcgtttgagcctaggctgcagtgagcagtgactgtgctactgcgttccagcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45440503 228 + 49145316 tggctcatacctagaattccagcactttgggagacctaggtgggag----gcttgagcccaagagtttgagaccagcctgggcaaaatggcaaaaccctgtcactacaaaacataaaaattaggcaggtgtggtgga-ggcacctgtaatcccagctactggggaggctgaggtgggaggatcgcttgagcccaggctgcagtgagcagtgactgtgctatggagttccagcc i calJac3.chr22 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=12928.000000 s hg38.chr19_GL949747v2_alt 156446 10 + 729520 agggagggag s panTro4.chr19 59089651 10 + 63644993 agggagggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966738 10 + 60714840 agggagggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102735982 10 - 106955855 agggagggag i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47153565 10 + 51301725 ggggaaggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46858174 10 + 50890351 agggaaggag i chlSab2.chr6 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e calJac3.chr22 45440731 0 + 49145316 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=4159.000000 s hg38.chr19_GL949747v2_alt 156456 8 + 729520 ggagggag s panTro4.chr19 59089661 8 + 63644993 ggagggag i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47153575 8 + 51301725 ggaaggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46858184 8 + 50890351 ggaaggag i chlSab2.chr6 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e ponAbe2.chr19 55966748 0 + 60714840 C e calJac3.chr22 45440731 0 + 49145316 C e nomLeu3.chr10 102735992 0 - 106955855 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=1751.000000 s hg38.chr19_GL949747v2_alt 156464 6 + 729520 ggaggg s panTro4.chr19 59089669 6 + 63644993 ggaggg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102735992 2 - 106955855 ----gg i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 46858192 6 + 50890351 ggaagg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e ponAbe2.chr19 55966748 0 + 60714840 C e calJac3.chr22 45440731 0 + 49145316 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=13597.000000 s hg38.chr19_GL949747v2_alt 156470 54 + 729520 aaggagtgaagaagggaagaaagaagggagggaaggagggaaggaaggagggag s panTro4.chr19 59089675 54 + 63644993 aaggagtgaagaagggaagaaagaagggagggaaggagggaaggaaggagggag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102735994 54 - 106955855 aaggagggaaggagggaagaagggaaggaaggaagaagggaaggaaggagggag i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e ponAbe2.chr19 55966748 0 + 60714840 C e calJac3.chr22 45440731 0 + 49145316 C e chlSab2.chr6 46858198 0 + 50890351 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=4041.000000 s hg38.chr19_GL949747v2_alt 156524 64 + 729520 ggaaggagggaaggaagaagggagggaaggagggaaggaaggagggagggagggaaggagggaa s nomLeu3.chr10 102736048 64 - 106955855 ggaaggagggaaggaggaagggaaAAAGGGAAAGACGGAGGGAGAGGGGAAGGAAAGAAAGAAA i nomLeu3.chr10 C 0 I 360 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e ponAbe2.chr19 55966748 0 + 60714840 C e calJac3.chr22 45440731 0 + 49145316 C e chlSab2.chr6 46858198 0 + 50890351 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I e panTro4.chr19 59089729 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949747v2_alt 156588 400 + 729520 ggaaggagggagggaaggagggaaggaaggagggagggagggaaggagggaaggaaggagggagggaaggagggaaggaagaagggagggaaggagggaaggaaggagggagggagggaaggagggaaggaaggagggagggagggaaggagggaaggaaggagggagggagggagggaaggagggaaggaaggagggagggaaggagggaaggaaggagggagggaaggaaggagggagggaaggagggaaggaaggagggagggaaggaaggagggaaggaaggagggaaggaaggagggagggaaggaaggagggagggaaggaaggagggagggagggagggaaggagggaaggaaggagggagggaaggagggaaggaaggagggagggaaggaa e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e ponAbe2.chr19 55966748 0 + 60714840 C e calJac3.chr22 45440731 0 + 49145316 C e nomLeu3.chr10 102736112 360 - 106955855 I e chlSab2.chr6 46858198 0 + 50890351 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I e panTro4.chr19 59089729 0 + 63644993 C a score=2257.000000 s hg38.chr19_GL949747v2_alt 156988 26 + 729520 ggagggagggaaggagggaaggaagg s ponAbe2.chr19 55966748 26 + 60714840 ggaaggagggaagaagggaaggaagg i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e calJac3.chr22 45440731 0 + 49145316 C e nomLeu3.chr10 102736112 360 - 106955855 I e chlSab2.chr6 46858198 0 + 50890351 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I e panTro4.chr19 59089729 0 + 63644993 C a score=4371.000000 s hg38.chr19_GL949747v2_alt 157014 22 + 729520 agggagggaaggaaggagggaa s ponAbe2.chr19 55966774 22 + 60714840 agggagggaaggagagaaggaa i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45440731 22 + 49145316 agggacaaagggaaggagggaa i calJac3.chr22 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e nomLeu3.chr10 102736112 360 - 106955855 I e chlSab2.chr6 46858198 0 + 50890351 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I e panTro4.chr19 59089729 0 + 63644993 C a score=3925.000000 s hg38.chr19_GL949747v2_alt 157036 17 + 729520 ggaaggaagaagggaaa- s panTro4.chr19 59089729 17 + 63644993 ggaaggaagaagggaaa- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966796 16 + 60714840 gaagggaagaagagaa-- i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45440753 18 + 49145316 ggaggaaaagaggcaaga i calJac3.chr22 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e nomLeu3.chr10 102736112 360 - 106955855 I e chlSab2.chr6 46858198 0 + 50890351 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=6073.000000 s hg38.chr19_GL949747v2_alt 157053 10 + 729520 agggaaggac s panTro4.chr19 59089746 10 + 63644993 agggaaggac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966812 8 + 60714840 --ggatggag i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 46858198 10 + 50890351 agggaaggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45440771 10 + 49145316 agggagggag i calJac3.chr22 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e nomLeu3.chr10 102736112 360 - 106955855 I e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=188067.000000 s hg38.chr19_GL949747v2_alt 157063 117 + 729520 ggagggaaggaggAAGGAAAGAAACTAGGAGATAGCTGTGGCACTTTAGCTACAATATGATGGTGGTCTGGCCTAGGGAGGAAGCAGTGTGATTCACAGAAGGGACCGGGGTTAAAA s panTro4.chr19 59089756 117 + 63644993 ggagggagggaggaaggAAAGAAACTAGGAGATAGCTGTGGCACTTTAGCTACAATTTGATGGTGGTCTGGCCTAGGGAGGAAGCAGTGTGATTCACAGAAGGGACCGGGGTTAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966820 90 + 60714840 ggagggaggaaggAAAGAAAGAAACTAGGAGATAGCTGTGGTACTTTAGCTACAACATGATGGTGGGCTGGCCTAGAGAG---------------------------GGGGTTAAAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60026555 117 + 64156825 ggaggaagggaggaaggaaagaaactaggagatagttgtggaactttagctacaacatgatggtgatctggcctagggaggaagcagtgTGATTCACAGAAGGGACCAGGGTTAAAA i rheMac3.chr19 I 1155 C 0 s papAnu2.chr19 47153583 117 + 51301725 ggaggaagggaggaaggaaagaaactagGAGATAGCTGCAGAACTTTAGCTACAACATGATGGTGATCTGGCCTAGGGAGGAAGCAGTGTGATTCACAGAAGGGACCGGGGttaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46858208 117 + 50890351 ggaggaagggaggaaggaaagaaactaggagatagctgcggaactttagctacaacatgatggtgatctggcctagggaggaagcagtgTGATTCACAGAAGGGACCNGGGTTAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45440781 117 + 49145316 ggaggaaggagggaaagaaagaaACTAGGACATAGCTGTGGCACTTTAGCTACAACATGATGGTAGTCTGGCCTAGGGAGGAAGGAGTGTGATTCACAGAAGGGACCAGAGTTAAAA i calJac3.chr22 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e nomLeu3.chr10 102736112 360 - 106955855 I e macFas5.chr19 55048529 6096 + 59248254 I a score=133911.000000 s hg38.chr19_GL949747v2_alt 157180 69 + 729520 TTTTTATATGTTCAC-AAAGGCCGTATGTTTAGGTCAATGTAGCATGGGAAGATAAAAG--------GAAAAAAAAAA s panTro4.chr19 59089873 69 + 63644993 TTTTTATATGTTCAC-AAAGACCGCATGTTTAGGTCAATGTAGCATGGGAAGTTAAAAA--------GAAAAAAAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966910 69 + 60714840 TTTTTATATGTTCAC-AAAGACCGTATGTTTAGGTCAATGTAGGGTGGGAAGTTAAAAA--------GAAAAAAAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102736472 69 - 106955855 TTTTTATATGTTCAC-AAAGACCGTATGTTTAGGTCAATGCAACATGAGAAGTTAAAAA--------GAAAAAAAAAT i nomLeu3.chr10 I 360 C 0 s rheMac3.chr19 60026672 70 + 64156825 TTTTTATATGTTCACAAAAGACCATATGTTTAGGTCAATGTAGCATGGAAAGTTaaaaa--------aaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47153700 78 + 51301725 tttttgtatgttcACAAAAGACCATATGTTTAGGTCAATGTAGCatggaaagttaaaaataaaaaataaaaaagaaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46858325 76 + 50890351 TTTTTGTATGTTCACAAAAGACCATATGTTTAGGTCAATGTAGCATGGAAAGTTaaaaataaaaa--aaaaagaaaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45440898 70 + 49145316 TTTTTGTATATTCACAAAATAACACATGTTTAGGTCAATGTAGTATGGGACGTTAAAAA--------TTAAAAAAGGA i calJac3.chr22 C 0 I 310 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=6360.000000 s hg38.chr19_GL949747v2_alt 157249 7 + 729520 ----CAAATTA s panTro4.chr19 59089942 10 + 63644993 -AAACAAATTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966979 9 + 60714840 --AACAAATTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102736541 2 - 106955855 ---------TA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60026742 11 + 64156825 aaaaaaaaTTA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47153778 11 + 51301725 aaaaaaaatta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46858401 11 + 50890351 aagaaaaatta i chlSab2.chr6 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e calJac3.chr22 45440968 310 + 49145316 I e macFas5.chr19 55048529 6096 + 59248254 I a score=606277.000000 s hg38.chr19_GL949747v2_alt 157256 284 + 729520 AAATaaataaataagaccacatgttgtatgattccatttgtaagcgcaatgtccagaacaggcaaatctttacagatagaaagtcaattactggttaccagggatggatggaggtttgtgggatgatggacatggggtttctttgcagggtatgaaactgttctgaatata-actacacaatggtcatgtctgcacaactcggtgaatatactaaaaatcagggagttgtat----gttttGTGTTTTTTT-----------TTTTTTCCAGGAAATTAAAGAAGCCAAGAGTTGTATGT s panTro4.chr19 59089952 283 + 63644993 AAATaaataaataagaccacatgttgtatgattccatttataagcgcaatgtccagaacaggcaaatctttacagatagaaagtcaattactggttaccagggatggatggaggtttgcgggatgatggacatggggtttctttgcagggtatgaaactgttctgaatata-actacacagcggtcatgtctgcacaactctgtggatataccaaaagtcagggagttgtat----gttttGTGTTTTTTT-----------TTTCC-CCAGGAAATTAAAGAAGCCAAGAGTTGTATGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966988 284 + 60714840 AAATaaataaataagaccacatgttgtatgattccatttataagcgcaatgtccagaacaggcaaatctttacagatagaaggtcaattactggttaccagggatggatggaggtttgcgggatgatggacatggggtttctttacagggtatgaaactgttctgaatata-agtacacagtggtcatgtttgcacaactctgtggatatactaaaaatcagggagttgtaT----GGTTGTTGTTTTTTT-----------TTTTTTTCAGGAAATCAAAGAAGCCAAGAGTTGTATGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102736543 288 - 106955855 AAATaaataaataagaccacgtgttgcatgattccatttataagtgcaatgtccagaacaggcaaatctttacagatagaaagtcaattactggttaccagggatggatggaggtttgcgagatgatggatatggggtttctttgcagggtatgaaactgttctgaatata-actacacagtggtcatgtttgcacaactctgtggatatactaaaaatcagggagttgtaTGTTGGtttttttttttttt-----------tttttttCAGGAAATCAAAGAAGCCAAGAGTTGTATGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60026753 286 + 64156825 AAATaaataaataagaccacatattgtgtgattccatgtgtaagtacaatgtccggaacaggcaaatctttacagatagaaagtcaattactggtttccagggatggatggaggtttgggggatgacggatatggggtttctttgcagggtatgaaattgttctgaaaatacactacacagtggtcatgtttgcacaactccgtggatatactaaaaatcagggagttgtaT----GTTGGTTTTTCTTTTC----------TTTTTTTCAGGAAATCAAAGAAGCCAAGAGTTGTATGT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47153789 293 + 51301725 aaat-aataaataagaccaCATGTTGTGTGATTCCATGTGTAAGTACAATGTCCGGAACAGGCAAATCTTTACAGATAGAAAGTCAATTACTGGTTTCCAGGGATGGATGGAGGTTTGGGGGATGACGGATATGGGGTTTCTTTGCAGGGTATGAAATTGTTCTGAAAATA-ACTACACAGTGGTCATGTTTGCACAACTTCGTGGATATACTAAAAATCAGGGAGTTGtat----gttggtttttcttttcttttctttt-tttttttcaggaaatcaAAGAAGCCAAGAGTTGTATGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46858412 296 + 50890351 aaaTaaataaataagaccacctgttgtgtgattccatgtgtaagtacaatgtccggaacaggcaaatctttacagatagaaagtcaattactggtttccagggatggatggaggtttgggggatgatggatatggggtttctttgcagggtatgaaattgttctgaaaatgcactacacagtggtcatgtttgcacaactccgtggatgtactaaaaatcagggagttgtaT----GTTGGtttttcttttcttttcttttctttttttCAGGAAATCAAAGAAGCCAAGAGTTGTATGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45441278 268 + 49145316 aaataaataaataaGA-cacaggttgtatgactccatttgtgagcacaatgtccagaacaggcagatctttacagacaggaagtcaagcagtgctttccagagacggacggcggtttgggggatgacagatctggggtttctttgcagggtgtgaaactgttgtgaaaata-actacacagtggtcatgtttgtacaactcggcggatatactaaaagtcagggaattTTTT------------------------------TTTTTTTTACAGAATCAAAGCAGCCAAGAGTTGTGTGT i calJac3.chr22 I 310 I 322 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=210795.000000 s hg38.chr19_GL949747v2_alt 157540 155 + 729520 TTTAAGTGGATGAGTATGTGAATTAGAGTTCCCTAAAGCTGTTATTGG-------AAAAAAAACCTTTGATGAGGTAAACATTAATGAAAAATATTTTCTTTTTAAAATTT--Cacatatatatacacatacacacatacata----tatatacacacatgcacacac s panTro4.chr19 59090235 155 + 63644993 TTTAAGTGGATGAGTATGTGAATTAGAGTTCCCTAAAGCTGTTATTGG-------AAAAAAAACCTTTGATGAGGTAAACATTAATGAAAAATATTTTCTTTTTAAAATTT--Cacatatatatacacatacacacatacata----tatatacacacatgcacacac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967272 144 + 60714840 TTTAAGTGGATGAACATGTGAATTAGAGTTCTCTAAAGCTGTTATTGG------AAAAAAAAACCTTTGATGAGGTAAACA------AAAAATATTTTCTTTTTAAAATTT--Cacatatatatatatacacacacacacaca----catat------atatacacac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102736831 158 - 106955855 TTTAAGTGGATGAATATGTGAATTAGAATTCCCTAAAGCTTTTATTGGAAAAAAAAAAAAAAACCTTTGATGAGGTATACATTAATGAAAAATATTTTCTTTTTAAAATTT--cac----atatacacacacacacatacata----tatatacacacatgcacacac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60027039 144 + 64156825 TTTAAGTGGATGACTATGTGAATTAGAGTTCCCTAGAGCTGTTATTGG-------AAAAAAAA-CTTTGATGAGGTAAACATTAATGAAAATT------TTTTTAAAATTT--cacatatatatacatatatatacaca--------tatatatacacacgcacacac i rheMac3.chr19 C 0 I 323 s papAnu2.chr19 47154082 154 + 51301725 TTTAAGTGGATGACTATGTGAATTAGAGTTCCCTAAAGCTgttattgg-------aaaaaaaa-ctttGATGAGgtaaacattaatgaaaaat------ttttttaaatttcacacatatatatacatatatatacacacacacacgtatatataaatatgtatacat i papAnu2.chr19 C 0 I 292 s chlSab2.chr6 46858708 144 + 50890351 TTTAAGTGGATGACTAGGTGAATTAGAGTTCCCTAAAGCTGTTATTGG-------AAAAAAAA-CTTTGATGAGGTAAACATTAATGAAAAAT------TTTTTTGAATTT--CACacatatatatacatatatacaca--------tatatatacacatgcacacac i chlSab2.chr6 C 0 I 324 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e calJac3.chr22 45441546 322 + 49145316 I e macFas5.chr19 55048529 6096 + 59248254 I a score=16845.000000 s hg38.chr19_GL949747v2_alt 157695 9 + 729520 acatacata s panTro4.chr19 59090390 9 + 63644993 acatacata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967416 9 + 60714840 acatacata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102736989 9 - 106955855 acatacGTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60027506 9 + 64156825 acatacata i rheMac3.chr19 I 323 C 0 s papAnu2.chr19 47154528 9 + 51301725 acatacata i papAnu2.chr19 I 292 C 0 s chlSab2.chr6 46859176 9 + 50890351 acatacata i chlSab2.chr6 I 324 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e calJac3.chr22 45441546 322 + 49145316 I e macFas5.chr19 55048529 6096 + 59248254 I a score=24545.000000 s hg38.chr19_GL949747v2_alt 157704 13 + 729520 tgtattttttgag--- s panTro4.chr19 59090399 13 + 63644993 tGTAttttttgag--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967425 13 + 60714840 TGTAttttttgag--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102736998 13 - 106955855 TGTATTTTTTGAG--- i nomLeu3.chr10 C 0 I 303 s rheMac3.chr19 60027515 13 + 64156825 tatattttttgag--- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47154537 13 + 51301725 tatattttttgag--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46859185 13 + 50890351 tatattttttgag--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45441868 16 + 49145316 tgtatttttagtagag i calJac3.chr22 I 322 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=287524.000000 s hg38.chr19_GL949747v2_alt 157717 146 + 729520 atggagtcttgctctgttgcccaggatggagtgcagtggtgtgatcttggctcactgcaaactccgtctcgtgggttcaagcgattctccagtttcagcctcccaagtagctgggattacaggcacacaccaccatgcccgg-ctaa s panTro4.chr19 59090412 146 + 63644993 atggagtcttgctctgttgcccaggatggagtgcagtggtgcgatcttggctcactgcaacctccgcttcttgggttcaagcgattctccagtttcagcctcccaagtagctgggattacaggcacactccgccatgcccgg-ctaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967438 146 + 60714840 atggagtcttgctctgttgcccaggatggagtgcagcggtgcaatcttggctcactgcaacctccgcctcctgggttcaagcgattctcctgtctcagcctcccaagtagctgggattacaggcacacaccaccatgcctgg-ttaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102737314 146 - 106955855 atggagtcttgctctgttgcccaggatggagtgcagtggtgcaatctcggctcactgcaacctccgcctcctgggttcaagcgattctcctgtctcagcctcccaagtagctgggattacaggtatacaccaccatgcctgg-ctaa i nomLeu3.chr10 I 303 C 0 s rheMac3.chr19 60027528 146 + 64156825 acggaatcttgctcttttgcccaggctggagtgcagtggtgcaatctcggctcactgcaacctctgcctcctgggttcaagcgattctcctgtctcagcctcccaagtagctgggattacaggcgcacaccaccatgcccgg-ctaa i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47154550 146 + 51301725 acggaatcttgctcttttgcccaggctggagtgcagtggtgcaatctcgcctcactgcaacctccgcctcctgggttcaagcgattctcccgtctcagcctcccaagtagctgggattacaggcgcacaccaccatgcccgg-ctaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46859198 146 + 50890351 acggaatcttgctcttttgcccaggctggagtgtagtggtgcaatctcggctcactgcaacctccgcctcctgggttcaagcgattctcctgtctcagcctcccaagtagctgggattacaggcgcacaccaccatgcccgg-ctaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45441884 114 + 49145316 acggggtttcaccatgttgaccaggatgg-------------------------------tctcaatctcttgacctc--gtgatccactcgcctcagcctcccaaagcgctgggattataggcgtgagccaccgcacccggcctaa i calJac3.chr22 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=359034.000000 s hg38.chr19_GL949747v2_alt 157863 138 + 729520 tttttgtattttcagtagagacggggtttcaccatgttggccaggctggtctcaaactc---------------ctgacctca-----ggtgatctgcctgtctcagcctcccaaagtgctgggattacaggcgtgagccactgcgcccggccctttt s panTro4.chr19 59090558 138 + 63644993 tttttgtattttcagtagagacggggtttcaccatgttggccaggctggtctcaaactc---------------ctgacctca-----ggtgatctgcctgtctcggcctcccaaagtgctgggattacaggcgtgagccactgcgcccggccCtttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967584 138 + 60714840 tttttgtattttcagtagagacggggtttcaccgtgttggccaggctggtctcaaaccc---------------ctgacctca-----ggtgatctgcctgtctcggcctcccaaagtgctgggattacaggcgtgagccactgcgcctggccCtttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102737460 138 - 106955855 tttttgtattttcagtagagatggggtttcaccatgttggccaggctggtctcaaactc---------------ctgacctca-----ggtgatctggctgtctcagcctcccaaagtgctgggattacaggcgtgagccactgcgcccggccCTTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60027674 136 + 64156825 tttctgtatttttagtagagacggggtttcactgtgttagccaggatggtctcgatctc---------------ctgacctt-------gtaatccacctgcctcggcctcccaaagtgctgggattacaggcgtgagtcactgcgcccggccCtttt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47154696 138 + 51301725 tttctgtatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactc---------------ctgacctta-----ggagatctgcccgtctcggcctcccaaagtgctgggattacaggcgtgagtcactgcgcccagccctttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46859344 138 + 50890351 tttctgtatttttagtagagatgggatttccccatgttggccaggctggtctcaaactc---------------ctgacctta-----ggagatctgcccgtctcggcctcccaaagtgctgggattacaggcgtgagccactgcgcccagccctttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45441998 138 + 49145316 tttttgtatttttaatagagatagggtttctccatgttggccagcctggtctcaaaccc---------------ctgacctca-----ggtgatccacctgccttagcctcccaaagtgctgggattacaggcatgagccactacacccagccCTTTT i calJac3.chr22 C 0 C 0 s mm10.chr7 3687933 157 + 145441459 tttttttttttttttccgagacagggtttctctgtgtagccctggctgtcctggaactcactttgtagaccaggctggcctcgaactcagaaatctgcctgcctctgcctccc-gagtgctgggattaaaggcttgcgccaccatgcctggctctctg i mm10.chr7 I 1637 I 128 e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=329562.000000 s hg38.chr19_GL949747v2_alt 158001 152 + 729520 aattttatatttatttattttttaAAAATAAAGGTTTAAAATAAagggacgggatcttgctatgttggccaagttgatcttgaacttttggcctcaagcaatcctctcgcctcagcctccgaaagtgctaggattataggcataagccccca s panTro4.chr19 59090696 152 + 63644993 aattttatatttatttattttttaaaaataaaGGTTTAAAATAAagggacgggatcttgctatgttggccaagttgatcttgaactcttggcctcaagcaatcctctcgcctcagcctccgaaagtgctaggattataggcataagccccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967722 152 + 60714840 aattttatatttatttatttttttaaaataaaGGTTTAAAATAAagggacgggatcttgctatgttgcccaagttgatctcgaactcttggcctcaagcaatcctctcgcctcagcctcccaaagtgctaggattataggcataagccccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102737598 152 - 106955855 AATTTTATATTTGTTTATTTTTTTAACATAAAGGTTTAAAATAAagggacgggatcttgctatgttggccaagttgatcttgaactcttggtttcaagcaatcctctcacctcagcctcccaaagtgctaggattataggcataagccccca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60027810 152 + 64156825 aattttatatttatttatttttttaaaataaaGGTTTAAATTAAagagacgggatcttgctacattggccaagtggatcttgaactcttggcctcaagccatcctctggcctcagcctcccacagtgctgagattataggcgtcagtcccca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47154834 152 + 51301725 aattttatatttatttatttttttaaaataaaggtttaaaataaaGGGACGGGATCTTGCTACATTGGCCAAGtggatcttgaactcttggcctcaagccatcctctggcctcagcctcccacagtgctgagattataggcgtcagTCCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46859482 152 + 50890351 aattttatatttatttatttttttaAAATAAAGGTTTAAAATAAagggacgggatcttgctacgttggccaagtggatcttgaactcttggcctcaagccatcctctggcctcagcctcccacagtgctgagattataggcgtcagtcccca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45442136 134 + 49145316 AATtttatatttattta-----------------tttaaaacaaagggat-ggatcttgctatgttggccagattgactttgaactcttggcctcaggcagtcctctcacctcagcctcccaaagtgctatgattataggcatgagccccca i calJac3.chr22 C 0 C 0 e mm10.chr7 3688090 128 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=20007.000000 s hg38.chr19_GL949747v2_alt 158153 8 + 729520 cgcccagA s panTro4.chr19 59090848 8 + 63644993 cgcccagA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967874 8 + 60714840 cacccagA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102737750 8 - 106955855 agcccagA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60027962 8 + 64156825 cgcccagA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47154986 8 + 51301725 CGCCcaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46859634 8 + 50890351 cacccagA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45442270 8 + 49145316 cgcccagc i calJac3.chr22 C 0 C 0 s mm10.chr7 3688218 8 + 145441459 TGCCTGGA i mm10.chr7 I 128 C 0 e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=1434208.000000 s hg38.chr19_GL949747v2_alt 158161 519 + 729520 TGAAAA---ATATTTCCTTAAGCTGAAAGTGGACCCTAAGCCGTGAATATTTGTTGTCTGGGAAGCAAAAACATCAGGTTGACATAGATCTTTACCTCCTTTATCTCTTCTCTTTGCTCCCAATACGCTACAAG----GAGAAGAGCAAGGAATTGCTTAGGTTGag-acagccagcttctaccccaaagcagctctggtccagcggaggtgtgagacgtagacccagac--acatgccca-ccctcacag--cagcagatgctaggatggaggttgccctgggcagggcgGG------AACACACAACAGGCACTCAGGGCGGAAGGGGACACAGGA--GACAGAGCGGCAGAGT--------TGTTAGGGCAGCCCCACTCACCTGTCATGATTCCCACGTAGCAGTAGCTGTAGCTGAGTGTCTCCATCAGGGAGGGCACGTCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAGCCTGAGGCCATTTCCTTCCTCTGGGCCAGATGCAGGTCCTGGACTTCACTGGCCAGGCTCACCAGCTG s panTro4.chr19 59090856 527 + 63644993 TGAAAA---ATATTCCCTTAAACTGAAAGTGGACCCTAAGCTGTGAATATTTGTAGTCTGGGAAGCAAAAACATCAGGTTGACATAGATCTTTACCTCCTTTATCTCTTCTCTTTGCTCCCAATACGCTACAAG----GAGAAGAGCAAGGAATCGCTTAGGCTGag-acagccagcttctaccccaaagcagctctggtccagcggaggtgtgagacgtagacccagac--acatgccca-ccctcacag--cagcagatgctaggatggaggttgccccgggcagggcgGG------AACACAGAACAGGCACTCAGGGCGGAAGGGGACACAGGA--GACAGAGCGGCAGAGTGGCACAGCTGTCAGGGCAGCCCCACTCACCTGTCATGATTCCCACGTAGCAGTAGCTGTAGCTGAGCGTCTCCATCAGGGAGGGCACATCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAGCCTGAGGCCATTTCCTTCCTCTGGGCCAGGTGCAGGTCCTGGACTTCACTGGCCAGGCTCACCAGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967882 525 + 60714840 TGTAAA---ATATT-CCTTAAACTGAAAGCGGACCCTAAGCTGTGAATATTTGTTGTCTGGGCAGCAAAAACATCAGGTTGACATAGATCTTTACCTCCTTTATCTCTTCTCTTTGCTCCCAATATGCTACAAG----GAGAAGAGCAAGGAATCACTTAGGCTGagaacagccagcttctaccccaaagcagctctggtccagcggaggtgtgagatgtagacccagac--acatgctca-ccctcacag--cagcagatgctaggatggaggctgccccggggagggtgGA------AACACAGAACAGGCACTCAGGGCGG-AGGGGACACAGGA--GACAGAGTGGCAGAGTGGCAGAGCTGTCAGGGCAGCCCCACTTACCTGTCATGATTCCCACGTAGCAGTAGCTGTAGCTGAGCGTCTCCATCAAGGAGGGCACGTCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAGCCTGAGGCCATTTCCTTCCTCTGGGCCAGGTGCAGGTCCT-GACTTCACTGGCCAGGCTCACCAGCTG i ponAbe2.chr19 C 0 I 352 s nomLeu3.chr10 102737758 520 - 106955855 TGAAAA---ATATTTCCTTAAACTGAAAGTGGACCCTAAGCTGTGAATATTTGTTGTCTGGGCAGCAAAAATATCAGGTTGACATAGATCTTTACCTCCTTTATCTCTTCTCTTTGCTCCCAATACGCTACAAG----GAGAAGAGCAAGGAATCGCTTAGGCTGagaacagccagcttctaccccaaagcagctctggtccagcggaggtgtgacacgtagacccagac--acgtgctca-ccctcacag--cagcagatgctaggatggaggttgccccgggcagggcgGG------AACACAGAACGGGCACTCAGGGCAGAGGGGGACACAGGT--GACAGAGTGGCAGAGC--------TGTCAGGGCAGCCCCACTCACCTGTCATGATTCCCACGTAGCAGTAGCTGTAGCTGAGCGTCTCCATCAGGGAAGGCACGTCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAGCCTGAGGCCATTTCCTTCCTCTGGGCCAGGTGCAGGTCCTGGACTTCACTGGCCAGGCTCACCAGCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60027970 507 + 64156825 TGAAAA---ATATTTCCTTAAACTGAAAGTGGACCCTAAGCTGTGAATATTTGTTATCTGGGCAGCAAAAACATTAGGTTGACATAGATCTTTACCTCCTTTCTCTCTTCTCTGTGCTCCCCATAAGCTACAGGAGAAGAGAAGAGCAAGGAATCACTTAGGCTGagaacagccagcttctaccccaaagcagctctggtccagcggaggcgtgagacgtagacccagac--acatgctca-ccctcacag--cagcagatgctaggatggaggttgccccgggcagggcgGG------AACATAGAACAGGCACTCAGGGCGG------------------CGGAGAGACAGAGC--------TGCC-GGGCAGGCCCACTCACCTGTCATGATTCCCACGTAGCAGTAACTGTAGCTGAGCGTCTCCATCAAGGAGGGCACGTCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAACCCGAGGCCATTTCCTTCCTCTGGGCCAGGTGCAGGTCCTGGACTTCACTGGCCAGGCTCACCAGCTG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47154994 507 + 51301725 tgaaaa---atatttccttaaactGAAAGTGGACCCTAAGCTGTGAATATTTGTTATCTGGGCAGCAAAAACATCAGGTTGACATAGATCTttacctcctttctctcttctctgtgctCCCCATAAGCTACAGGAGAAGAGAAGAGCAAGGAATCACTTAGGCTGAGAACAGCCAGCTTCCACCCTGAAGCAGCTCTGGTCCAGCGGAGGCGTGAGACGTAGACCCAGAC--ACATGCTCA-CCCTCACAG--CAGCAGATGCTAGGATGGAGGTTGCCCCGGGCAGGGCGGG------AACATAGAACAGGCACTCAGGGTGG------------------CGGAGAGACAGAGC--------TGTC-GGGCAGGCCCACTCACCTGTCATGATTCCCACGTAGCAGTAACTGTAGCTGAGCGTCTCCATCAAGGAGGGCACGTCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAACCCGAGGCCATTTCCttcctctgggccaggtgcaggtCCTGGACTTCACTGGCCAGGCTCACCAGCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46859642 507 + 50890351 TGAAAA---ATATTTCCTTAAACTGAAAGTGGACCCTAAGCTGTGAATATTTGTTATCTGGGCAGCAAAAACATCAGGTTGACATAGATCTTTACCTCCTTTCTCTCTTCTCTGTGCTCCCCATAAGCTACAGGAGAAGAGAAGAGCAAGGAATCACTTAGGCTGagaacagccagcttctaccccgaagcagctctggtccagcggaggcgtgagacgtagacccagac--acatgctcg-ccctcacag--cagcagatgctaggatggaggttgccccgggcagggcgGG------AACACAGAACAGGCACTCAGGGCGG------------------TGGAGAGACAGAGC--------TGTC-GGGCAGGCCCACTCACCTGTCATGATTCCCACATAGCAGTAACTGTAGCTGAGCGTCTCCATCAAGGAGGGCACGTCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAACCCGAGGCCATTTCCTTCCTCTGGGCCAGGTGCAGGTCCTGGACTTCACTGGCCAGGCTCACCAGCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45442278 491 + 49145316 TGAAAA---ATATTTCCTTAAACTAAAAGTGGACCCTAAAT----------------------------------------ACACAGACCTTTGCCTCCTTTATCTCTTCTCTTTGCTGCCAATAAGCTACAAC-AAGGAGAAGAGCAAGGAATCACTTAGGCTGAGAAGAGCCAGCCTCCACCCCAAGGCACTTCTGGTCCAGTGGAGGTGTGAGACTTGGATCCACAT--ACATGCTCA-CCCTCACAG--CAGCGGACGCTAAGATGGAGCTTGCCCCGGGCAGGGTGGG------AACACAGAATAGGCACCCAGGGAGGAGGGAAACACGGGA--GACAGAGCGGCGCAGCGGCAGAGCTGTCCCGGCAGGCCCACTCACCGGTCATGATTCCCACGTAGCAGTAGCTGTAGCTGAGCGTCTCCATCAAGGAGGGCACGTCAGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAGCCCGTGGCCATTTCCTTCCTCTGGGCTAGGTGCAGGTCCTGGACTTCACTGGCCAGGCTCACCAGCTA i calJac3.chr22 C 0 C 0 s mm10.chr7 3688226 459 + 145441459 GGGAAAGATACATTTTCTGAAATGGAAA---GATCCTGGGTTAGGAATATTTACTCCATGGATGGCAGAAAC-CCAGGTTTACATAGGCC--TATCTCCTTTAACTCTCCTATTGGCCCCCTA------ACAGG----AGAAAAAGGAAGCAATCCTTCAGGATTAG--------------TTCCCACAGTAG---------------------------------ACAG--ATATGCT-----CTGACAGGACAGTAGCTGACAGAGTGTAGGTAGCCTAGGACAGAGCCGGGGACATAACACAGGAACAGAACTCTGGGTAGATCGAGGCAGAGGA-TGACCCAGAG---------------TGCT-GGGCAGG--CACTCACCTGTCATGATTCCCACGTAACAGTAGCTATAGCTGAGTGTCTCCATCAAAGAGGGGACCTCAGGCAGGAGGCCCAGCGTAGGCTCCTTGTGGAAGCCGGAGGCTATTTCCTTTCTCTGAGCCAGATGCAGATCCTGGACTTCACTAGCTAGACTCACCAACTG i mm10.chr7 C 0 I 2 s canFam3.chr1 19646583 479 - 122678785 TGGAAA---CTACCTCCTGAGGCT-AACGTGG-----GAGTGGAATGTATTTATTCCCTGCATGGCAGAAACCTCAGGCTTCCATAGGTCATT--CTCCCTCATCTC--CTATTTGTTCCCAAGAAGCCACAGG----------------AAATCATTTAGGCGGAGAACAGTCTGTCTCTACTCTGGAGGAG--------CAGCGGGAAAGCTTGACATAAACCCAGGCCTAGATGCTCATCCTTTAGAG--GAGCAGACACTGGGATGGAG---------------GCAGG------AACACAGGGCAGGCACCAAAGTCAGGGTGCAGAATGGAGCCGAGAGGGTGACGGGAT--------GGGG-GCACAGGCACACTCACCTGTCATGATTCCTACGTAGCAGTAGCTGTAGCTGAGTGTCTCCATCAGGGAGGGGACGTCAGGCAGGAGCCCCAGGCTGGGCCCCTTGCTGAAACCTGAGGCCATTTCCTTCCTCTGGGCCAAGTGCAGGTCCTGTACTTCACTGGCCAGGCTCACCAGCTG i canFam3.chr1 I 1485 C 0 e macFas5.chr19 55048529 6096 + 59248254 I a score=9000.000000 s hg38.chr19_GL949747v2_alt 158680 2 + 729520 GG s panTro4.chr19 59091383 2 + 63644993 GG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55968759 2 + 60714840 GG i ponAbe2.chr19 I 352 C 0 s nomLeu3.chr10 102738278 2 - 106955855 GG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60028477 2 + 64156825 GG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47155501 2 + 51301725 GG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860149 2 + 50890351 GG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45442769 2 + 49145316 GG i calJac3.chr22 C 0 I 20 s mm10.chr7 3688687 2 + 145441459 GG i mm10.chr7 I 2 C 0 s canFam3.chr1 19647062 2 - 122678785 GG i canFam3.chr1 C 0 C 0 e macFas5.chr19 55048529 6096 + 59248254 I a score=119831.000000 s hg38.chr19_GL949747v2_alt 158682 59 + 729520 CAGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTCTGGGCCCTTCCCCACACCCATCTCC s panTro4.chr19 59091385 59 + 63644993 CAGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTCTGGGCCCTTCCCCACACCCATCTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55968761 59 + 60714840 CGGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTCTGGGCCCTTCCCCATACCCATCTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738280 59 - 106955855 TGGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTCTGGGCCCTTCCCCACACCCATCTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60028479 59 + 64156825 CGGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTTTGGGCCCTTCCCCACACCCATCTCC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47155503 59 + 51301725 CGGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTTTGGGCCCTTCCCCACACCCATCTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860151 59 + 50890351 CAGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTTTGGGCCGTTCCCCACACCCATCTCC i chlSab2.chr6 C 0 C 0 s mm10.chr7 3688689 55 + 145441459 AAGAGAGAGGAAGGCAAGTGAT-----TGG---CGTCCCCAGGCCA-CCTTCACATCCACTTTC i mm10.chr7 C 0 I 1564 s canFam3.chr1 19647064 57 - 122678785 -AGCAGGGGGCACACGTAGGGTACAGACACATCAGACAACAGGACC-TCCTCGCCCCCA----- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45442771 20 + 49145316 I e macFas5.chr19 55048529 6096 + 59248254 I a score=12201.000000 s hg38.chr19_GL949747v2_alt 158741 8 + 729520 CTTGCGCG s panTro4.chr19 59091444 8 + 63644993 CTTGCGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55968820 8 + 60714840 CTTGCGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738339 8 - 106955855 CTTGCGCG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60028538 8 + 64156825 CTTGTGCT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47155562 8 + 51301725 CTTGTGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860210 8 + 50890351 CTTGTGCT i chlSab2.chr6 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647121 0 - 122678785 C e calJac3.chr22 45442771 20 + 49145316 I e macFas5.chr19 55048529 6096 + 59248254 I a score=841860.000000 s hg38.chr19_GL949747v2_alt 158749 403 + 729520 GCTGCCCTCGGCAGCCAAGGGGTGCT-------GGGTGCCC--------------------------G-CAGCTCTGCCCATCT--------AGGTTGTGT-GTAACGCCTCTAGCTGGGCggtgttccccagggctcagtcccaggccctcc--tccc--ctttccctgttctgtgcttacctgctctcacgcaatcacggaggtttcgatactatccacacgctgaggacgcccaaacgcta----------------------ccccag-ccccagacctatccaatcaagtggcttattggcatttatactcggatgtct-ccaggcacccc-----aaacgcactggaaacggaacatgatgttacccaccccacaaggtagaccctcttctagtgtctcccctcaaacaacaggccacca--------aattgttcaagccaaaaat--------ctCCCTCACTCCCCAAATCCGATCCTTTAAtctc s panTro4.chr19 59091452 402 + 63644993 GCTGCCCTCGGCAGCCAAGGGGTGCT-------GGGTGCCC--------------------------G-CAGCTCTGCCCATCT--------AGGTTGTGT-GTAACGCCTCTAGCTGGGCggtgttccccagggctcagtcccaggccctcc--tccc--ctttccctgttccgtgcttacctgctctcatgcaatcacggaggtttcgatactatccacacgctgaggatgcccaaacgcta----------------------ccccag-ccccagacctatcca-tcaagtggcttattggcatttatactcggatgtct-ccaggcacccc-----aaacgcactggaaacggaacatgatgttacccaccccacaaggtagaccctcttctagtgtctcccctcaaacaacaggccacca--------aattgttcaagccaaaaat--------ctCCCTCACTCCCCAAATCCGATCCTTTAATCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55968828 401 + 60714840 GCTGCCCTCAGCAGCCAAGGCGTGCT-------GGGTGCCC--------------------------G-CAGCTCTGCACATCT--------AGGTTGTGT-GTAACGCCTCTAGCTGGGCggtgttccccagtgctcagccctaggccctcc--tcccctctttccctattccatgcttacctgctctcactcaatcacggaggtttcgatattatccacacgctgaggatgcccaaacgcta----------------------ccccag-ccccagacctatcca-tcaagtggcttattggcatttatactccgatgtct-ccaggcacccc-----aaacgcactggaaacagaacacgatgttacccaccccacaaggtagatcctcttctagtgtctcccctca---aataggccacca--------aattgttcaagtcaaaaac--------ctCCCCCACTCCCCAAATCCAAtcttttaatctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738347 403 - 106955855 GCTGCCCTCGGCAGCCAAGGGGTGCT-------GGGTGCCC--------------------------A-CAGCTCTGCACATCT--------AGGTTGTGT-GTAACGCCTCTAGCTGGGCggtgttccccagtgctcagtcccaggccctcc--tcccctctttcccttttccgtgcttacctgctctcacgcaatcgcggaggtttcgatactatccacacgctgaggatgcccaaacgcta----------------------ccccag-ccccagacctatcca-tcaaatggcttattggcatttatactcggatgcct-ccaggcacccc-----aaatgcaccggaaacggaacacgatgttacccaccccacaaggtagatcctctt-tagtgtctcccctcaaacaacaggccacca--------aattgttcaagccaaaaac--------ctCCCTCACTCCCCAAATCCAATCCtttaatctt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60028546 399 + 64156825 GCTGCCCTCTGCAGCCAAGGGGTGCT-------GCATGCTC--------------------------G-CAGCTCTGCGTATCT--------AGGTTGTGT-GTAACGCCTCTAGCTGGGCagtgctccccagggctcagtcccaggccctcc--tccccgccttccctgttctgtccttacctgctctcaggcagtcccagaggtttcgatactatccacacactgatgatgctcaaacgcta----------------------ccccag-ccccagacctatcca-tcaagtggcttattggcatttagactcggatgtct-ccaggcacccca----aaacgcactggaaacggaagacgatgttacctgccccacaaagtagatcctcttctagtgtctcccctgaaacaataggccacca--------aattgttcaaacccaaaac--------ctCCCTCACTCCCCAAATCCGAtctctt------ i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47155570 405 + 51301725 GCTGCCCTCTGCAGCCAAGGGGTGCT-------GCATGCTC--------------------------G-CAGCTCTGTGTATCT--------AGGTTGTGT-GTAACGCCTCTAGCTAGGCAGTGTTCCCCAGAGCTCAGTCCCAGGCCCTCC--TCCCCGCCTTCCCTGTTCTGTCCTTACCTGCTCTCAGGCAGTCACAGAGGTTTCGATACTATCCACACACTGATGATGCTCAAACGCTA----------------------CCCCAG-CCCCAGACCTATCCA-TCAAGTGGCTTATTGGCATTTAGACTCGGATGTCT-CCAGGCAccgca----aaatgcactggaaacgGAAGACGATGTTACCCGCCCCACAAAGTAGATCCTCTTCTAGTGTCTCCCCTGAAACAACAGGTCACAA--------AATTGTTCAAACCCAAaacctccctcactccctcactcCCCAAATccgatctc-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860218 403 + 50890351 GCTGCCCTCTGCAGCCAAGGGGTGCT-------GCATGCTC--------------------------G-CAGCTCTGCATATCT--------AGGTTGTGT-GTAAGGCCTCTAGCTGGGCAGTgttccccagggct--gtcccaggccctcc--tccctgccttccctgttctgtccttacatgctctcaggcagtcacagtggtttcgatactatccatacactgatgatgctcaaacgcta----------------------ccccag-ccccagacctatcca-tcaaatggcttattggcatttacactcagatgtct-ccaggcaccaca----aaacgcactggaaacggaagacgatgttacccgccccacaaagtagatcctcttctagtgtctcccctgaaacaataggccacca--------aattgttcaaacccaaaacctcccttactccctcactccccaaatccgatcTC-------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45442791 374 + 49145316 GCTGCCCTCTGCAGCCACAGGGTGCT-------GGGCACCC--------------------------ACCAGCTTTGCACCCCA--------AGGTTGTTT-GTAAAGGCCGTATC-GGACagtg-tctccagggctgagtcccaggcattcc--tccc--ctttccccattccatccttacctgctctcacacaatcacggagctttagatactaccca-----------------------------------------------cccag-ccccagacctatcca-ggtaatggcttattggcatcgatacgtggatgtct-cta-gcacttc-----aaaagcactggaaacagaagacgatgttaccca-cccacaaagcagaccctcttctagtctctcccctcaaacaaaaggccaccg--------aattgttcaagctgaaaac--------ctCCCTCGATCCCCAAATCCTATCCCTTAACCtc i calJac3.chr22 I 20 I 294 s canFam3.chr1 19647121 456 - 122678785 -CTCCTCTCAGCAGCCAAGGGGTGCTGCGGCCAGCGTGCCACTAGGAGCCGAGCTTCTATTCCAGGGG-CAGCTCTGGGCCTCTGGAATCAGAGGTGGCCCGGTAGCAGCTTCTGCTAGCTGAGGGCTTTGGGCACTCCCTTCTGGGcccttccatctctctgttcccccttccaggttcttctgtcct----------ctgtggctt-gataccagccacgatctcatgacctccacaaactgtatccttagtctgggttcctccctccagcccccaaaaccactca---gggtgactc-ctgtcattaggacttggatgcctgccaggttcctcagactcgacacatccagagtggagcgttgtgctactcactccacagagcgggtcccctcccag----tcccctcag--caaaggccaccagcagcctgaactgctcagaccaggaac--------ctGCCTTACTTCCCAGATCTGATCCC-------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e macFas5.chr19 55048529 6096 + 59248254 I a score=-4554.000000 s hg38.chr19_GL949747v2_alt 159152 12 + 729520 tct------ttttttttt s panTro4.chr19 59091854 18 + 63644993 tctctctttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969229 7 + 60714840 tct-----------tttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738750 4 - 106955855 ttt--------------t i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60028945 5 + 64156825 --t-----------tttt i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 46860621 1 + 50890351 -----------------G i chlSab2.chr6 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647577 0 - 122678785 C e calJac3.chr22 45443165 294 + 49145316 I e papAnu2.chr19 47155975 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I a score=238135.000000 s hg38.chr19_GL949747v2_alt 159164 111 + 729520 tttttttttttgagacaagttttg--ctctgtcaccca-----ggctggagtatactggtgtgatctcggctcactgcaacccccacctcctgggggcgcaagcaattctcatgcctc s panTro4.chr19 59091872 111 + 63644993 tttttttttttgagacaagttttg--ctctgtcaccca-----ggctggagtatagtggcgtgatctcggctcactgcaacctccacctcctgggggctcaagcaattctcatgcctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969236 111 + 60714840 ttttcttttttgagacaagttttg--ctctgtcaccca-----ggctggagtatagtggcgcgatctcggctcactgcaacctgtgcctcctggaggctcaagcagttctcatgcctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738754 110 - 106955855 tttttttttttgagacaagttttg--ctctgtcaccca-----ggctggagcatagtggcgc-atctcagctcactgcaaactccgcctcctgggggctcaagcaattctcatgcgtc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60028950 109 + 64156825 tttttttttttgagacaagttttg--ctctgtcaccca-----ggctggagtagagtggcaca--gtcggctcactgcaacctccgcctcctggggactcaagcaattctcatgcctc i rheMac3.chr19 C 0 I 26 s papAnu2.chr19 47155975 111 + 51301725 tttttttttttgagacaagttttg--ctctgtcaccca-----ggctggagtagagtggcacgatgtcggctcactgcaacctccgcctcctggggactcaagcaattctcatgcctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860622 111 + 50890351 tttttttttttgagacaagttttg--ctctgtcaccca-----ggctggagtagagtggcacgatgtcggctcactgcaacctccgcctcctggggactcaagcaattctcatgcctc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443459 103 + 49145316 tctttctttttgagacaagtttta--ctctgtcgccca-----ggctggagta--------tgatcttggctcactgccaccttcccctcccaggggttcaagcaatgctcatgcctc i calJac3.chr22 I 294 C 0 s canFam3.chr1 19647577 90 - 122678785 --------------GCAGGTCTCGGAGTCTGTCCCCTACACTCCGCTGAGGCTGAATGGGTTCACCCTGGTTCCCTGCCCCCCCCTCCCCC--------------ACCCCCCCTTCTC i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e macFas5.chr19 55048529 6096 + 59248254 I a score=30128.000000 s hg38.chr19_GL949747v2_alt 159275 16 + 729520 agctggc--caggctggt- s panTro4.chr19 59091983 16 + 63644993 agctggc--caggctggt- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969347 16 + 60714840 agctggc--cagactggt- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738864 16 - 106955855 agctggc--caggctggt- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47156086 16 + 51301725 agctggc--caggctggt- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860733 16 + 50890351 agctggc--caggctggt- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443562 16 + 49145316 agctggc--caggctggt- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19647667 19 - 122678785 TGCAGACCTCAGGCTGAGC i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60029059 26 + 64156825 I a score=125286.000000 s hg38.chr19_GL949747v2_alt 159291 52 + 729520 ctcgaactcctggcctcaagtgatctgcccgccttgaaatcccTTAAG-TTTG s panTro4.chr19 59091999 52 + 63644993 ctcgaactcctggcctcaagtgatctgcccgccttgaaatcccTTAAG-TTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969363 52 + 60714840 ctcgaattcctggcctcaagtgatctgcccgccttgaaatcccTTAAG-TTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738880 52 - 106955855 ctcgaactcctggcctcaagtgatctgcccgccttgaaatccctgaag-tTTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029085 50 + 64156825 CTCGA--TTCTGGCCTCAAGTAATCGGCCTGCCTTGAAATCCCTTAAG-TTTG i rheMac3.chr19 I 26 C 0 s papAnu2.chr19 47156102 52 + 51301725 ctcgaacttctggcctcaagtaatcggCCTGCCTTGAAATCCCTTAAG-TTTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860749 52 + 50890351 ctcgaacttctggcctcaagtaatctgcctgccttgaaatcccTTAAG-TTTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443578 53 + 49145316 ctcaaactcctggcctcaagtgatctgcccaccttgaaatcccTTAAGTTTTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19647686 47 - 122678785 CTACAGCAGCAGGCCTCAGCTGGGCTTCCAGCTT-----CCTCTCAGG-TTTG i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e macFas5.chr19 55048529 6096 + 59248254 I a score=276506.000000 s hg38.chr19_GL949747v2_alt 159343 123 + 729520 AGTCTGTTGCCTCTTTCCATCTCCACTACTGAGCTGAATATGTTGTACTCTCCACCCTTTCCCACCAGTCCCAAGGTCCACCCTATATCAATAGATCTCCTTCTTCCAGCTTGTGGCTGGGTT s panTro4.chr19 59092051 123 + 63644993 AGTCTGTTGCCTCTTTCCATCTCCACTACTGAGCTGAATATGTTGTACTCTCCACCCTTTCCCACCAGTCCCAAGGTCCACCCTATATCAATAGATCTCCTTCTTCCAGCTTGTGGCTGGGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969415 123 + 60714840 AGTCTGTTGCCTCTTTCCATCTCCACTACTGAGCTGAATATGTTGTACTCTCCATCCTTTCCCACCAGTCCCAAGGCCCACCctatatcaacagacctccttcttccagcttgtggctggctt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738932 123 - 106955855 AGTCTGTTGCCTCTTTCCATCTCCACTACTGAGCTGAATATATTGTAGTATCCACCCTTTCCCACCAGTCCAAAGGTCTACCCTATATCAATAGATCTCCTTCTTCCAGCTTGTGGCTGGGTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029135 123 + 64156825 ACTCTGTTGCCTCTTTTCATCTCCACTACTGAGCTGAATATGTTGTactctccaccctttcccaccagtcccaaggtccaccctatatcaatagatctcattcctccagcttgtggctgggtt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47156154 123 + 51301725 ACTCTGTTGCCTCTTTTCATCTCCACTACGGAGCTGAATATGTTGTACTCTCCACCCTTTCCCACCAGTCCCAAGGTCCACCCTATATCAATAGATCTCGTTCTTCCAGCTTGTGGCTGGGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860801 123 + 50890351 ACTCTGTTGCCTCTTTTCATCTCCACTACTGAGCTGAATATGTTATACTCTCCAACCTTTCCCACCAGTCCCAAGGTCCACCCTATATCAATAGATCTCGTTCTTCCAGCTTGTGGCTGGGTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443631 121 + 49145316 AGTC--TTGCCTCTTTCCGTCTCCACTAATGAGAGGAGTACGTTGTACTCTCCATCCTTTCCCGCCAGTCCCAAGGTCGGCCCTATATCCACAGGGCTCTGTCTTCCAGCTTCTGGCCAGGGC i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647733 0 - 122678785 C e macFas5.chr19 55048529 6096 + 59248254 I a score=291516.000000 s hg38.chr19_GL949747v2_alt 159466 120 + 729520 GTCAGTAGAAATCCCTGGCTGGA----GACAAAGTCAGG--AGAGGGAGGGTAGGGCTTTTATTCCCTTGTAAGATGGCCTTGGGCTGGCTGTCACCCTT--------GATAGATCATTTCAAGGT----GGGTGGCT s panTro4.chr19 59092174 120 + 63644993 GTCAATAGAAATCCCTGGCTGGA----GACAAAGTCAGG--AGAGGGAGGGTAGGGCTTTTACTCGCTTGTAAGATGGCCTTGGGCTGGCTGTCACCCTT--------GATAGATCATTTCAAGGT----GGGTGGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969538 120 + 60714840 gtcaatagaaacccctggctgga----gacgaagtcagg--agagggaggacagggcttttattcccTTATGAGATGGCTTTGGGCTGGCCGTCACCCCT--------GATAGATCATTTCAAGGT----GGGTGGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739055 120 - 106955855 GTCAATATAAATCCCTGGCTGGA----GACGAAGTCAGA--AGAGGGAGGGCAGGGCTTTTATTCCCTTGTGAGATGGCCTTGGGCTGGCCGCCACTCTT--------GATAGATCATTTCAAGGT----GGGTGGCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029258 124 + 64156825 gtccatagaaatccctggctggagtcggacaaagtcagg--agagggagggcagggcttttattcccttgTGAGATGGCCTTGGGCTGGCCATCACCCTT--------GACAGATCGTTTCAAGGT----GGGTGGCT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47156277 124 + 51301725 GTCCATAGAAATCCCTGGCTGGAGTCCGACAAAGTCAGG--AGAGGGAGGGCAGGGCTTTTATTCCCTTGTGAGATGGCCTCGGGCTGGCCATCACCCTT--------GACAGATCGTTTCAAGGT----GGGTGGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860924 124 + 50890351 GTCCATAGAAATCCCTGGCTGGAGTCGGACAAAGTCAGG--AGAGGGAGGGCAGGGCTTTTATTCCCTTGTGAGATGGCCTTGGGCTGGCCATCACCCTT--------GATAGATCATTTCAAGGT----GGGTGGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443752 123 + 49145316 GCCAACAGAAAGCCCTGGCTGGAGATGCATGAAGACAGG--AGGGGGCAG-CAGGGCTTTTACTCCCCAGTGAGATGGGCTTGGGCTGGCCGTCGCCCTT--------GATAGATCATTTCAAGGT----GGGTGGCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19647733 133 - 122678785 GCCCATAGAAAGCCCAGGGTGGA----GA-GGGGGCAGGCAGGATTGAGCACTGGGCTCTTCTTCCCTTGTAAGATCCCCAGGGCCTGGCTGTGCCCCTTCACTGATGGACGGACCGTGTCAAGATGGAGGGAGGGCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e macFas5.chr19 55048529 6096 + 59248254 I a score=38426.000000 s hg38.chr19_GL949747v2_alt 159586 21 + 729520 CTACACACCCTTTAAAAAAAA s panTro4.chr19 59092294 21 + 63644993 GTACACACCCTTTAAAAAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969658 21 + 60714840 CTACACACCCTTTAAAAAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739175 21 - 106955855 CTATACACCCTTTAAAATAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029382 21 + 64156825 CTACTCACCCTTTAAAAAAAA i rheMac3.chr19 C 0 I 1 s papAnu2.chr19 47156401 21 + 51301725 Ctactcatcctttaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861048 21 + 50890351 CTACTCACCCTTTAAAAAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443875 20 + 49145316 CTACATACTCATAAAAAAAA- i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e macFas5.chr19 55048529 6096 + 59248254 I a score=7644.000000 s hg38.chr19_GL949747v2_alt 159607 4 + 729520 TAAT s panTro4.chr19 59092315 4 + 63644993 TAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969679 4 + 60714840 TAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739196 4 - 106955855 TAAT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47156422 4 + 51301725 taat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861069 4 + 50890351 TAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443895 4 + 49145316 TAAT i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60029403 1 + 64156825 I a score=136136.000000 s hg38.chr19_GL949747v2_alt 159611 112 + 729520 TTTggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggttgggagttcgagatcagcctgaccaacatggaaaaacc s panTro4.chr19 59092319 112 + 63644993 TTTggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcaggcggatcacctgaggtcgggagttcgagatcagcctgaccaacgtggagaaacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969683 112 + 60714840 TTTggccaggcgtggtggctcatgcctgtaatctcagcactttgggaggccgaggcaggcggatcacctgaggtcaggagttcgagattagcctgaccaacatggagaaacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739200 112 - 106955855 TTTggccaggcgcggtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggttgggagttcgagatcagcctgaccaatatggagaaacc i nomLeu3.chr10 C 0 M 136 s papAnu2.chr19 47156426 111 + 51301725 gttggcc-ggtgtggtggctcgcgccggtaatcccagcactttgggaggctgaggtgggcggatcacctgaggtcaggagtttgagaccagcctgaccaacaaggagacatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861073 112 + 50890351 GTTggctgggtgtggtggctcgcgcctgtaatcccagcactttgggaggctgaggtgggtggatcacctgaggtcgggagtttgagaccagcctgaccaacaaggagaaacc i chlSab2.chr6 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e calJac3.chr22 45443899 0 + 49145316 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60029403 1 + 64156825 I a score=24086.000000 s hg38.chr19_GL949747v2_alt 159723 28 + 729520 ctgtctctactaaaaatacaaaaaatta s panTro4.chr19 59092431 28 + 63644993 ccgtctctactaaaaatacaaaaaatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969795 28 + 60714840 ccgtctctactaaaaatacaaaaaatta i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47156537 28 + 51301725 ccgtctctactaaaaatacgaaaaatta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861185 28 + 50890351 ccgtctctactaaaaatataaaaagtta i chlSab2.chr6 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e calJac3.chr22 45443899 0 + 49145316 C e nomLeu3.chr10 102739312 136 - 106955855 M e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60029403 1 + 64156825 I a score=191685.000000 s hg38.chr19_GL949747v2_alt 159751 169 + 729520 gccgggcatggtggtgagtgcctgtaattccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcggtaagccaagatcgtaccattgcactccagcctgggcaacaggagtgaaactccgtctcaaaaaaaaaaaaaaaaaaaa--------------------------------aa s panTro4.chr19 59092459 167 + 63644993 gccgggcatggtggtgcgtgcctgtaattccagctactcgggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcggtaagccaagatcgtaccattgcactccagcctgggcaacaagagtgaaactccgtctcaaaaaaaaaaaaaaaaaaaa---------------------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969823 166 + 60714840 gccaggcatggtggtgcatgcctgtaattccagctactcaggaggctgaggcaggagaattgcttgaacccgggaggcggaggttgcagtaagccaagatcctaccgttgcactccagcctgggcaacaagagtgaaactccgtctcaaaaaaaaaaaaaaaaaaa----------------------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739448 170 - 106955855 gccgggcatggtggtgcatgcctgtaattccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggctgaggttgcggtgagccaagatcgtaccattgcactccagcctgggcaacaagagtgaaactccgtctcaaaaaaaaaaaaaaaaaaaa-------------------------------aaa i nomLeu3.chr10 M 136 C 0 s papAnu2.chr19 47156565 201 + 51301725 gccgggcatggtggtgcatgcctgtaattccagctacccgggaagccagggcaggagaattgcttgaacccaggaggcggaggttgtggtgagccaagatcgtgctattacactccagcctgggcaacaagagcgaaactccgtctcaaaaaaaaaaataaataaataaataaataaaataaaataaaaaaaatatatata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861213 161 + 50890351 gccgggcatggtgatgcatgcctgtaattccagctactcgggaagccgaggcaggagaattgcttgaacccgggaggcgggtgttgtggtgagccaagatcgtgctattgtactccagcctgggcaacaagagcaaaactccgtctcaaaaaaa----------------------------------------aTATATA i chlSab2.chr6 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e calJac3.chr22 45443899 0 + 49145316 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60029403 1 + 64156825 I a score=7527.000000 s hg38.chr19_GL949747v2_alt 159920 5 + 729520 TTTAG s panTro4.chr19 59092626 5 + 63644993 TTTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969989 5 + 60714840 TTTAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739618 5 - 106955855 TTTAG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47156766 5 + 51301725 tatag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861374 5 + 50890351 TGTAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443899 5 + 49145316 TTTAG i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60029403 1 + 64156825 I a score=566530.000000 s hg38.chr19_GL949747v2_alt 159925 280 + 729520 ggccaggt-----gtgacggctcacacctataacactagcactttggttggcctaggcaggcagatcacttgatgtcaggggtttgagaccagcccggccaacatggtgaaaccccatctctact--aaaaatat---aaaaattagcaaggcgtggtggtgggcgcctgtagtcccagctactcgagaggctgaggcaggagaatcgctcgaacccgagaggcagaggttgcagtg-----agatcacaccactgcactccagcctgggcaacagagcgagactccatctttaa s panTro4.chr19 59092631 280 + 63644993 ggccaggt-----gtgacggctcacacctataacactagcactttggttggcctaggcaggcagatcacttgatgtcaggggtttgagaccagcccggccaacatggtgaaaccccatctctact--aaaaatat---aaaaattagcaaggcgtggtggtgggcgcctgtagtcccagctactcgagaggctgaggcaggagaatcgctcgaacccgagaggcagaggttgcagtg-----agatcacaccactgcactccagcctgggcaacagagcgagactccatctttaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969994 280 + 60714840 ggccgggt-----gtgacggctcacacctgtaatactagcactttggttggcctaggcaggcagatcacttgatgtcaagggtttgagaccagcccggccaacatggtgaaaccccatctctact--aaaaatat---aaaaattagccaggcgtggtggtgggtgcctgtaatcccagctactcgagaggctgaggcaggagaatcgctggaacctgggaggcagaggttgcagtg-----agatcacaccactgcactccagcctgggcaacagagcgagactccgtcCTTAA i ponAbe2.chr19 C 0 M 120 s nomLeu3.chr10 102739623 275 - 106955855 ggccgggt-----atgacggcccacacctgtaatactagcactttggttggcctaggcaggcagatcaattgatgtcaggggtttgagaccagcccggccaacatggtgaaaccccatctgtact--aaaaatat---aaaaattagcca-----ggtggtgggcgcctgtagtcccagctactcgagaggctgaggcaggagaatcgctggaacctgggaggcagaggttgcagtg-----agatcacaccactgcactccagcctgggcaacagagcaagactctgtctttaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55054625 286 + 59248254 ggccaggc-----gtggtggctcacgcccgtaatcccagcactttgggaggctgaggtgggtggatcac--gaggtcaggagatcgagaccatcctggccaacacggtgaaaccccgtttctacttaaaaaaaattcaaaaaattagccaggcgtggtggcgggcacctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccaagatcgcaccactgcactccagcctgggtgacagagcgagattctgtctt--a i macFas5.chr19 I 6096 C 0 s papAnu2.chr19 47156771 285 + 51301725 ggccTGGCATgatgtgatggttcatgcctgtaatcccaggactttggttggcctaggtgggcagatcacttgatgtcaggggtttgagaccagcccggccaagatggtgaaaccccgtctctact--aaaaatat---aaaaattagccaggtatggtggtgggcacctatagtcccagctactcgagaggctgaggtgggagaatcgctggaacctgggaggcagaggttgcagtg-----acatcacaccactgcactccagcctgggtgacagagcgagattctgtcttaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861379 285 + 50890351 GGCCTGGTGTGATATggtggctcacgcctgtaatcccagcactttggttggtctaggtgggcagatcacttgatgtcaggggtttgagaccagcccggccaagatggtgaaaccccgtctctact--aaaaatat---aaaaattagccaggtgtggtggtgggcacctgtagtcccagctactcgagaggctgaggtgggagaatcgctggaacctgggaggcagaggttgcagtg-----acatcacaccactgcactccagcctgggtgacagagcgagattctgtcttaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443904 253 + 49145316 ggccaggt-----gtggtggctcatgcttgcaatcccagcactttgggaggccaaggcaggtggatcacttgatgtcaggggtttgagaccagcctgggcaacatggtgaaacctcatctctact--aaaaatat---aaaaattagccggacatggtggtgggcacctgtaatctcagctactc--------------------------------gggaggcagaggttgcagtgagcagagattgcacaactgcactccagcctgggtgacagagcaagactccatctcaga i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e rheMac3.chr19 60029403 1 + 64156825 I a score=5603.000000 s hg38.chr19_GL949747v2_alt 160205 21 + 729520 aaataaataacatttaaaaaa s panTro4.chr19 59092911 21 + 63644993 aaataaataaaatttaaaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102739898 20 - 106955855 aaataaataaaa-taaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55054911 9 + 59248254 aaaaaaaaa------------ i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47157056 9 + 51301725 aaaaaaaaa------------ i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46861664 21 + 50890351 aaaaaaaaaaaaaaaaaaaaa i chlSab2.chr6 C 0 I 127 s calJac3.chr22 45444157 20 + 49145316 -aaaaaataaaataataaTAG i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e ponAbe2.chr19 55970274 120 + 60714840 M e rheMac3.chr19 60029403 1 + 64156825 I a score=-754.000000 s hg38.chr19_GL949747v2_alt 160226 4 + 729520 TTAa- s panTro4.chr19 59092932 4 + 63644993 TTAa- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102739918 4 - 106955855 TTAa- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55054921 3 + 59248254 tta-- i macFas5.chr19 I 1 I 3 s papAnu2.chr19 47157066 3 + 51301725 tta-- i papAnu2.chr19 I 1 I 2 s calJac3.chr22 45444177 4 + 49145316 -TAAT i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e ponAbe2.chr19 55970274 120 + 60714840 M e chlSab2.chr6 46861685 127 + 50890351 I e rheMac3.chr19 60029403 1 + 64156825 I a score=23499.000000 s hg38.chr19_GL949747v2_alt 160230 12 + 729520 ttttttgtagag s panTro4.chr19 59092936 12 + 63644993 ttttttgtagag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102739922 12 - 106955855 ttttttgtagag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55054927 12 + 59248254 ttttttgtagag i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47157071 12 + 51301725 ttttttgtagag i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 46861812 12 + 50890351 ttttttgtagag i chlSab2.chr6 I 127 C 0 s calJac3.chr22 45444181 12 + 49145316 ttttttgtagag i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e ponAbe2.chr19 55970274 120 + 60714840 M e rheMac3.chr19 60029403 1 + 64156825 I a score=71096.000000 s hg38.chr19_GL949747v2_alt 160242 32 + 729520 acagggtctcactatattgcccaggctggtct s panTro4.chr19 59092948 32 + 63644993 acagggtctcactgtattgcccaggctggtct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970394 32 + 60714840 acagggtctcactatattgcccaggctggcct i ponAbe2.chr19 M 120 C 0 s nomLeu3.chr10 102739934 32 - 106955855 acagggtctcactatattgcccaggctggtct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55054939 32 + 59248254 acagagtctcactatattgcccaggctggtct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47157083 30 + 51301725 ac--agtctcactatattgcccaggctggtct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861824 32 + 50890351 acagagtctaacgagattgcccaggctggtat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45444193 32 + 49145316 acagggtctcactatattgcccaggctggcct i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e rheMac3.chr19 60029403 1 + 64156825 I a score=246399.000000 s hg38.chr19_GL949747v2_alt 160274 82 + 729520 taaactcctggcctccagcagtcctcccactatgacctcccaaagcgctgggattatacaagtatgagccactgcaccaggc s panTro4.chr19 59092980 82 + 63644993 taaactcctggcctccagcagtcctcccactatgacctcccaaagcgctgggattttacaagtatgagccactgcaccaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970426 82 + 60714840 taaactcctggcctccagcaatcctcccactatggcctcccaaagcgctgggattatacaagtatgagccactgcaccaggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739966 82 - 106955855 taacctcctggcctccagcaatcctcccactgtgacctcccaaagcgctgggattatacaagtatgagccactgcaccagac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029404 82 + 64156825 TAAActcctggcctccagcaatcctcccgctatgacctcccaaagcgctgggattatacaagtatgagtcactgcaccaggc i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55054971 82 + 59248254 taaactcctggcctccagcaatcctcccgctatgacctcccaaagcgctgggattatacaagtatgagtcactgcaccaggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47157113 82 + 51301725 taaactcatggccgccagcaatcctcccgctatgacctcccaaagcgctgggattatacaagtgtgagtcactgcaccaggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861856 82 + 50890351 taaactccaggcctccagcaagcctcccactatgacctcccaaagcgctgggattatacaagtatgagtcactgcaccaggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45444225 79 + 49145316 taaactcctggcctccagcaatcctcccaccatggcctcccaaagcactgggatta---gattatgaggcactgcgccAAGT i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C a score=280280.000000 s hg38.chr19_GL949747v2_alt 160356 94 + 729520 cTACACAACCCTTTTTCCATCCAGGTACCACAACCTGACCCATTTCCCCTGGGCCTAGGGTTGGGAACGGCTCCTTCTGCGGGGCTGGGGTTCA s panTro4.chr19 59093062 94 + 63644993 cTACACAACCCTTTTTCCATCCAGGTACCACAACCTGACCCATTTCCCCTGGGCCTAGGGTTGGGAACGGCTCCTTCTGCCGGGCTGGGGTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970508 94 + 60714840 cTACACAACCCTTTTTCCATCCAGGTACCACAGCCTGACCCATTTCCTCTGGGCCTAGGGTTGGGAAGGGCTCCTTCTGCCGGTCTGGGGTTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740048 94 - 106955855 cTAAACAACCCTTTTTCCATCCAGGTACGACAACCTGACCCATTTCCCCTGGGCCTAGGGTTGGGATCGGCTCCTTCTGCCCGTCTGGCGTTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029486 94 + 64156825 cTACACAACCCTTTTTCCATCAAGGTACCACAACCTGAGCCACTTCCCCTGGGCCATGAGTTGGGAACGGCTCCTGCTGCTGGTCTGGGGTTCA i rheMac3.chr19 C 0 I 298 s macFas5.chr19 55055053 94 + 59248254 cTACACAACCCTTTTTCCATCAAGGTACCACAACCTGAGCCACTTCCCCTGGGCCATGAGTTGGGAACGGCTCCTGCTGCTGGTCTGGGGTTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47157195 94 + 51301725 ctacACAACCCTTTTTCCATCAAGGTACCACAACCTGAGCCACTTCCCCTGGGCTGTGAGTTGGGAACGGCTCTTGCTGCTGGTCTGGGGTTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861938 94 + 50890351 cTAGACAACCCTTTTTCCATCAAGGTACCACAACCTGACCCACCTCCCCTGGGCCTTGAGTTGGGAAGGGCTCCTGCTGCTGGTCTGGGGTTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45444304 91 + 49145316 CTACACAACCCTTTCTCCACCCAGGT---ACAACCTGCCCCACTTCCCCTGGGCCTAGGGTTGGGAAGGGCTCCTGCCGCAGGTCTGGGGTTCA i calJac3.chr22 C 0 I 4 s canFam3.chr1 19647866 81 - 122678785 CTGCACAA--TGTCTTCCCTTCAGGTTGCACTACCTGGCCCTCTTCTC---GGCCCTGGGCT--------CCCCAGCTGCTGGTCCAGGATTCC i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I a score=40679.000000 s hg38.chr19_GL949747v2_alt 160450 13 + 729520 GGCAC----CATCCCTT s panTro4.chr19 59093156 13 + 63644993 GGCAC----CATCCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970602 13 + 60714840 GGCAC----CATCCCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740142 13 - 106955855 GGCAC----CATCCCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029878 13 + 64156825 GGCAC----CACCCCTT i rheMac3.chr19 I 298 C 0 s macFas5.chr19 55055147 13 + 59248254 GGCAC----CACCCCtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47157289 13 + 51301725 GGCac----cacccctt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46862032 13 + 50890351 GGCAC----CACCCCtt i chlSab2.chr6 C 0 I 565 s calJac3.chr22 45444399 17 + 49145316 GGCACTTCTTGTCCCTT i calJac3.chr22 I 4 C 0 s canFam3.chr1 19647947 12 - 122678785 -TCAC----TGTCCCCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I a score=837.000000 s hg38.chr19_GL949747v2_alt 160463 3 + 729520 CTT- s panTro4.chr19 59093169 3 + 63644993 CTT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970615 3 + 60714840 CCT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740155 3 - 106955855 CTT- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029891 2 + 64156825 -TT- i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55055160 2 + 59248254 -tt- i macFas5.chr19 C 0 I 304 s papAnu2.chr19 47157302 2 + 51301725 -tt- i papAnu2.chr19 C 0 I 302 s calJac3.chr22 45444416 3 + 49145316 CTC- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19647959 3 - 122678785 -CTG i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e chlSab2.chr6 46862045 565 + 50890351 I a score=453905.000000 s hg38.chr19_GL949747v2_alt 160466 204 + 729520 GCTCTTCTACATCCTGCCCAATTGGTGGC-------CACTCCTTCAGTCATCCTAAATGC-GCGTTTCCTGCTGCAACTCA--GACCTACccacagccagccaacggcctgtatcaagcca-ccacagtttgtcacctggactc--------------------------------------ggacaaaggaggatccctttatctgagtccatcccatcttgccctgttccacttcaattctccttcagcat s panTro4.chr19 59093172 204 + 63644993 GCTCCTCTACATCCTGCCCAATTGGTGGC-------CACTCCTTCAGTCATCCTAAATGC-GCGTTTCCTGCTGCAACTCA--GACCTACCCACAGCCAGCCAACGGCCTGTATCAAGCCA-CCACAGTTTGTCACCTGGACTC--------------------------------------GGACAAAGGAGGATCCCTTTATCTGAGTCCATCCCATCTTGCCCTGTTCCACTTCAATTCTCCTTCAGCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970618 204 + 60714840 GCTCCTCTACATCCAGCCCACATGGTGGC-------CACTCCTTCAATCATCCTAAATGT-GCGTTTCCTGCTGCAGCTGA--GACCTACccacagccagccaacagcctgcatcaagcca-ccacagtttgtcacctggactc--------------------------------------ggataaaggaggatccctttatctaagtccatcccatcttgccctgttccacttcaattctccttcagcat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740158 204 - 106955855 GCTCCTCTACACCCTGCCCACATGGTGGC-------CGCCCCTTCAATCATCCTAAATGC-ACATTTCCTGCTGCAACTCA--GACCTACCCACAGCCAGCCGACAGCCTGCATCAAGCCA-CCACAGTTTGTCACCTGGACTT--------------------------------------GGATAAAGGAGGATCCCTTTATCTAAGTCCATCCCATCTTGCCCTGTTCCACTTCAATTCTCCTTCAACAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029894 238 + 64156825 GCTCTTCTACATCCTGCCCACACGGTGGC-------CACTCCTTCAATCATCCTAAATGT-GCATTTCCGGCTGCAGCTCA--GACCTACCCA----CAGCCGACAGCCTGTATCAAGGCA-CCACAGTCAGTCACCTGGACTTGGATAAAGGGATCCTTTTTATTTGGATCTCTTTATATAGGATAAAGGAGGATCCCTTTATCCGAGTCCATTCCATCTTGCCCTGTTCCACTTCAATTCTCCCTCAGCAT i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55055466 238 + 59248254 GCTCTTCTACATCCTGCCCACACGGTGGC-------CACTCCTTCCATCATCCTAAATGC-GCATTTCCGGCTGCAGCTCA--GACCTACCCA----CAGCCGACAGCCTGTATCAAGGCA-CCACAGTCTGTCACCTGGACTTGGATAAAGGGATCCTTTTTATTTGGATCTCTTTATATAGGATAAAGGAGGATCCCTTTATCCGAGTCCATTCCATCTTGCCCTGTTCCACTTCAATTCTCCCTCAGCAT i macFas5.chr19 I 304 C 0 s papAnu2.chr19 47157606 239 + 51301725 GCTCCTCTACATCCTGCCCACACGGTGGC-------CACTCCTTCAATCATCCTAAATGC-GCATTTCCTGCTGCAGCTCA--AACCTACCCA----CAGCCGACAGCCTGTATCAAGGCACCCACAGTCTGTCACCTGGACTTGGATAAAGGGATCCTTTTTATTTGGATCCCTTTATATAGGATAAAGGAGGATCCCTTTATCCAAGTCCATTCCATCTTGCCCTGTTCCACTTCAATTCTCCTTCAGCAT i papAnu2.chr19 I 302 C 0 s calJac3.chr22 45444419 200 + 49145316 GCTCCTCTACATCCTGCCCACAC-ACGGC-------CACTACTCTGACCATCCTAAATGCGGGGTTTCCTGCTGCAACTCCCTGCCCTACCCA----TAGCCAACAGCCTGCACCAAGCCG-T--CAGTTTGTCACCTGGACTC--------------------------------------AGATAAAGGGACCCTCCTTTATCCCAGTCCATCCCATCTTGCCCTGATCCACTTCAATTCTCCTCCAGCAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19647962 176 - 122678785 GCTCTTCTACATCCTGCCCCCACTGCTGTAAAGAAGAACTCCTCAAAGTGTCCCAAATGCAGCATTTCCTGCTGGAGCTCT--GA-----------------------CTGTATCAAGCTG-CCACTGCCAGTCAGCAGGACTT--------------------------------------TGATCAAGGAGACCATCCT----------CATCCCTTCTTGCCCT-TTCTGTGACAATTCT--GTCAGTAT i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e chlSab2.chr6 46862045 565 + 50890351 I a score=95441.000000 s hg38.chr19_GL949747v2_alt 160670 67 + 729520 ccagaacgagttttctttcttttcttttctttttttttt-gagatggaatcttgcccgggaaggccca s panTro4.chr19 59093376 68 + 63644993 CCAGAACGAGTTTTAtttcttttcttttctttttttttttgagatggaatcttgcccgggaaggccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970822 67 + 60714840 ccagaaccagtttttgttcttcttttttttttttttttt-gagatggaatcttgcccgggaaggccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740362 61 - 106955855 CCAGAACGAGttttcttt------tcctttttttttttt-gagatggaatcttgcctgggaagtccca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030132 60 + 64156825 CCAGAACGAGTA-------tttttttatttctatttttt-gagacggagtctcgcccggggaggccca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55055704 60 + 59248254 CCAGAACGAGTA-------tttttttatttctatttttt-gagacggagtctcgcccggggaggccca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47157845 63 + 51301725 TCagaacaagtatt--ttttttttttttttttttttttt-gagacggagtctcgctctgt--ggccca i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45444619 60 + 49145316 CCAGAAT-AGTGT------TTTTTTTTTTCTTTTTTTTT-GAGATGGCATCTCACCTGGGGAGGCCCA i calJac3.chr22 C 0 M 576 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19648138 0 - 122678785 C e chlSab2.chr6 46862045 565 + 50890351 I a score=428579.000000 s hg38.chr19_GL949747v2_alt 160737 280 + 729520 ggctggagtgcaatggcgggatcttggctcactgcaacctccaccttccaggttcaagcaattatcctgcctcagcctcctgagtagctgggattacaggtgtgagccaccacacccggctcatttttg-tatttttagtagagacggagttttaccatgttggccaggatggtctcaaactcctaacctcaggtgatctacccgcgtcagcctcccaaagtgctgggattacaggcgtgagccaccgcagctggcctagaatgagtatttctattt--gttt s panTro4.chr19 59093444 276 + 63644993 ggctggagtgcaatggcgggatcttggctcactgcaacctccaccttccaggttcaagcaattatcctgcctcagcctcctgagtagctgggattacaggtgtgagccaccacacccggctcatttttg-tatttttagtagagatggagttttaccatgttggccaggatggtctcaaactcttgacctcaggtgatctacccgcgtcagcctcccaaagtgctgggattacaggcgtgagccaccgcagctggccTAGAACGAGTAtttctattt------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970889 279 + 60714840 ggctggagtgcaatggtaggatcttggctcactgcaacctccaccttccaggttcaagcaattctcctgcctcagcctcc-gagtagctgggattacaggcatgcgctaccacacccggctcatttttg-tatttttagtacagacggggttttaccacgttggccaggatggtctcaaactcctgacctcaggtgatctacccacgtcagcctcccaaagttctgggattacaggcgtgagccaccgcagctggcctagaacgagtatttctatgt--gttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740423 280 - 106955855 ggctggagtgcaatagcgggatcttggctcactgcaacctctaccttccaggttcaagcaattctcctacctcagcctcctgagtagctgggattacaggtgtgagccaccacacctggctcatttttg-tatttttagtagagacagggttttaccatgttggccaggatggtctcaaactcctgacctcaggtgatctactcgcattagcctcccaaagtgctgggattacaggtgtgagccaccgcagctggccTAGAACGAGTAtttctattt--attt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030192 275 + 64156825 ggctggagtgcgatggtgggatcttggctcactgcaacctccaccttccaggttcaagcaattctcctgcctcaacctcccaagtagctgggattacaggtgtgagccaccac-tctggctcatttttt-tatttttagtagagatggagttttaccatgtcggccagactggtctcaaactcctgacctcaggtaatccacccgcatcagcctcccaaagtgttgtgattaaaggcgtgagccaccgcacctggccTAGAACGAGTAtttctattt------ i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55055764 275 + 59248254 ggctggagtgcgatggtgggatcttggctcactgcaacctccaccttccaggttcaagcaattctcctgcctcaacctcccaagtagctgggattacaggtgtgagccaccac-actggctcatttttt-tatttttagtagagatggagttttaccatgttggccagactggtctcaaactcctgacctcaggtaatccacccgcatcagcctcccaaagtgttgtgattaaaggcgtgagccaccgcacctggccTAGAACGAGTAtttctattt------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47157908 258 + 51301725 ggctggagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcccgccagtctcctgcctcagcctcccgagtagctgggactacaggcgcccacaaccgcgcccggctaattttttgtatttttagtagagacgaggtttcaccg------------tggtctcgatctcctgacctt--gtgatccgcccacctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggccta-------tttttttattttt---- i papAnu2.chr19 C 0 I 176 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19648138 0 - 122678785 C e calJac3.chr22 45444679 576 + 49145316 M e chlSab2.chr6 46862045 565 + 50890351 I a score=57530.000000 s hg38.chr19_GL949747v2_alt 161017 32 + 729520 atttatttttgagatggagttttgctcttgtt s panTro4.chr19 59093720 32 + 63644993 atttatttttgagatggagttttgctcttgtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55971168 32 + 60714840 atttatttttgagacggagttttgctcttgtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740703 32 - 106955855 atttatttttgagacggagttttgctcttgtt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030467 32 + 64156825 atttatttttgagacggagtttcactcttgtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55056039 32 + 59248254 atttatttttgagacggagtttcactcttgtc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47158342 32 + 51301725 atttatttttgagacggagtttcgctcttgtc i papAnu2.chr19 I 176 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19648138 0 - 122678785 C e calJac3.chr22 45444679 576 + 49145316 M e chlSab2.chr6 46862045 565 + 50890351 I a score=149642.000000 s hg38.chr19_GL949747v2_alt 161049 66 + 729520 gcccaggctggagtgcaatggtacgatctcagctcaccacaacctccgcctcctgggttcaagcaa s panTro4.chr19 59093752 66 + 63644993 gcccaggctggagtgcaatggtacgatctcagctcaccacaacctccgcctcctgggttcaagcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55971200 66 + 60714840 gcccaggttggagtgcaatggtacgatctcagctcaccacaacctccgcctcctgggttcaagcaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740735 66 - 106955855 gcccaggctggagtgcaatggtacgatctcagctcaccaaaacctctgcatcctgggttcaagcaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030499 66 + 64156825 acccaggctggagtgcaatggcgcgatgtcagctcaccacaacctctgcctcctgggttcaagcaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55056071 66 + 59248254 acccaggctggagtgcactggcgcgatctcagctcaccacaacctctgcctcctgggttcaagcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47158374 66 + 51301725 acccgggctggagtgtagtggcgcgatctcagctcaccacaacctctgcctcctgggttcaagcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46862610 66 + 50890351 gcccaggctggattgcgatggtgggatcttggctcactgcaacctccaccttccaggttcaagcaa i chlSab2.chr6 I 565 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19648138 0 - 122678785 C e calJac3.chr22 45444679 576 + 49145316 M a score=562965.000000 s hg38.chr19_GL949747v2_alt 161115 194 + 729520 ttctcctgcctcagcctcccgagtagctgggattacaggtatgtgccaccacgcccagctaatcttttgtatttttagtagagacagggtttctccattttggtcaggctggtcttgaactcccgacctcaggtgatccgcctgcctcagcctcccaaagtgctggca-ttacaggcgtgagctactgtgcccag- s panTro4.chr19 59093818 194 + 63644993 ttctcctgcctcagcctcccgagtagctgggattacaggtatgcaccaccacgcccagctaatcttttgtatttttagtagagacagggtttctccattttggtcaggctggtcttgaactcccggcctcaggtgatccgcctgcctcagcctcccaaagtgctggga-ttacaggcgtgagctactgtgcccag- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55971266 194 + 60714840 ttctcctgcctcagcttcctgagtagctgggattacgggcatgcgccaccatgcccagctaattttttgtatttttagtagagacagggtttctccattttggtcaggctggtctcgaactcccgacctcaggtgatccgcctgcctcagcctcccaaagtgctggga-ttacaggcgtgagctaccgtgcccag- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740801 194 - 106955855 ttctcctgcctcggcttcccaagtagctgggattacaggcatgcgccaccacgcccagctaattttttgtatttttagtagagacaaggtttctccattttggtcaagttggtctcgaactcctgacctcaggtgatccacctgcctcagcctcccaaagtgctggga-ttacaggcgtgagctactgtgcccag- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030565 194 + 64156825 ttctcctgcctcagcttcccgagtagctgggattacaggcgtgcgccaccacgctcagctaattttttgtatttttagtagagacagggtttctccattttggtcaggctggtctcaaactccccacctcaggtgatccgcctgcctcagcctcccaaagtgctggga-ttacaggcgtgagccaccgcgcccgg- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55056137 194 + 59248254 ttctcctgcctcagcttcccgagtagctgggattacaggcgtgcgccaccacgcccggctaattttttgtatttttagtagagacagggtttctccattttggtcaggctggtctcaaactccccacctcaggtgatccgcctgcctcagcctcccaaagtgctggga-ttacaggcgtgagccaccgcgcccgg- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47158440 194 + 51301725 ttctcctgcctcagcttcccgagtagctgggattacaggcgtgcaccaccacacgcagctaattttttgtattttcagtagagacagggtttctccattttgatcaggctggtctcaaactcccgacctcaggtgatccgcctgcctcagcctcccaaagtgctggga-ttacaggcgtgagccaccgcgcccgg- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46862676 192 + 50890351 ttctcctgcctcaacctcccaagtagctgggattacaggtgtgagccaccacact-ggctca-tttttgtatttttagtagagacagagttttaccatgttagccagactggtctcaaactccccacctcaggtgatccgcctgcctcagcctcccaaagtgttggga-ttacaggcatgagccaccgcgcccgg- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45445255 193 + 49145316 ttctcctgcctcagccttcccagtagctgggattacaggtatg--ccaccacacctggctca-tttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctgactgcaggtgatccacctgcctcagcctcccaaagtgctgggatttacaggcgtgagcctctgcacccggc i calJac3.chr22 M 576 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19648138 0 - 122678785 C a score=460246.000000 s hg38.chr19_GL949747v2_alt 161309 149 + 729520 ccagaacgagtatttttaaacatttaaaactggtcacattgcctcttctggcagcaaaccaaaaatcccctcttccagcagatctcaatcctccacgggaagaagtccaatgtcctcacggtctccagccaggcctagcacggtgtcag s panTro4.chr19 59094012 149 + 63644993 ccAGAACGAGTATTTTTAAACATTTAAAACTGGTCACATTGCCTCTTCTGGCAGCAAACCAAAAATCCCCTCTTCCAGCAGATCTCAATCCTCCACGGGAAGAAGTCCAGTGTCCTCAAGGTCTCCAGCCAGGCCTAGCACGGTGTCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55971460 149 + 60714840 ccagaacgagtatttttaaacatttaaaactggtcacattgcctcttctggcagcaaaccaaaaatcccctcttacagcagatctccgtcctccacaggaagaagtccaatgtcctcacggtctccagccaggcctagcatggtgtcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740995 149 - 106955855 ccAGAACGAGTATTTTTAAACATTTAAAACTGGTCACATTGCCTCTTCTGGCAGCAAACCAAAAATCCCCTCTTCCAGCAGATCTCAGTCCTCCACGGGAAGAAGTCCAACGTCCTCACGGTCTCCAGCCAGGCCTAGCACGGTGTCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030759 146 + 64156825 ccagaacaagtatttttaaacatttaaaactggtcacattgcctcttctggcagcaaaccaatgatcccctcttccagcagatctccgtcctccgtgg---gaagtccaaagtcctcacggtcgccagccagacctagcatggtgtcag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55056331 146 + 59248254 ccAGAACAAGTATTTTTAAACATTTAAAACTGGTCACATTGCCTCTTCTGGCAGCAAACCAATGATCCCCTCTTCCAGCAGATCTCCGTCCTCCGTGG---GAAGTCCAACGTCCTCACGGTCGCCAGCCAGACCTAGCATGGTGTCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47158634 149 + 51301725 ccagaacaagtatttttaaacatttaaaactggTCACATTGCCTCTTCTGGCAGCAAACCAAAGATCCTCTCTTCCAGCACATCTCCGTCCTCCGTGGGAAGAAGTCCAAAGTCCTCACGGTCGCCAGCCAGACCTAGCATGGTGTCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46862868 149 + 50890351 ccAGAACAAGTATTTTTAAACATTTAAAACTGGTCACATTGCCTCTTCTGGCAGCAAACCAAAGATCCCCTCTTCCAGCAGATCTCAGTCTTCCATGGGAAGAAGTCCAAAGTCCTCACGGTCACCAGCCAGACCTAGCATGCTGTCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45445448 148 + 49145316 cCAGAACAAGTATTTTTAAACATCTAAAACTGGTCACATCTCATCATTTGGCAGCAAACCAAAAATCACCTC-CCCAGCAGCGCTCAGTCCTCCATGGGAAGAAGTCCAGAGTCCTCATGGTTGCTGGCCAGGCCTAGCACGGTCTCAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19648138 111 - 122678785 CCAGAGCA--TATTTCCAAACACATAAACCTGGTCCCATTACCTCTTCTGGCAACAAACCAAAAGACCACTC--CCAGTGGCTCCTGGGCCCC----ATAAGAAGCCCAAAGCCCACAC------------------------------ i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I a score=929820.000000 s hg38.chr19_GL949747v2_alt 161458 298 + 729520 ccctgctgcctGTTCCCTTTTGCTCGTCC--------------CAGAAA----GTGGATGTGGCTGGTGTA--GCCTGTGGAACCCAGCCTGCTCCCCTCCACACA-------TCCTGCG-GCCTGAAATGCTCCTCCACGAACCCCTCTCTCATCCAACCTACTCCTGCC-ACCACTGAGCT--CCCACAGGGCACACTGAATGCTGGGAAGGC--CA--CTCCCTACCTAGCATGACTGCTGTGTTCACGGATAAGCCGC--------------CAG-----------TAGGAAACCAtgactctgtgggtctggggtgggccctagg----attctgtttttacccctcttcccaggtg s panTro4.chr19 59094161 298 + 63644993 CCCTGCTGCCCGTTCCCTTTTGCTCGTCC--------------CAGAAA----GTGGATGTGGCTGGTGTA--GCCTGTGGAACCCAGCCTGCTCCCCTCCACACA-------TCCTGCG-GCCTGAAACGCTCCTCCACGAACCCCTCTCTCATCCAACCTACTCCTGCC-ACCACTGAGCT--CCCACAGGGCACACTGAATGCTGGGAAGGC--CA--CTCCCTACCTAGCATGACTGCTGTGTTCACGGATAAGCCGC--------------CAG-----------TAGGAAACCAtgactctgtgggtctggggtgggccctggg----attctgttttcacccctcttcccaggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55971609 298 + 60714840 ccctgctgcccgttccctttTGCTCGTCC--------------CAGAAA----GCGTATGTGGCTGGTGCA--GCCTGTGGAACCCAGCCTGCTCCCCTCCACACA-------TCCTACA-GCCTGAAATGCTCCTCCACTAACCCCTCTCTCATCCAACCTACTCCTGCC-ACCGCTGAGCT--CCCACGGGGCACACTGAATGCTGGGGAGGC--CA--CTCCCTACCTAGCATGACTGCCGTGTTCACGGATAAGCTGC--------------CAG-----------TAGGAAACCGtgagtctgtgggtctggggtgggccctggg----attctgttttcacccatcttcccaggtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102741144 300 - 106955855 CCCTGCTGCCCATTCCCTTTTGCTCGTCC--------------CACAAA----GTAGATGTGGCTGGTGCA--GCCTGTGGAACCCAGCCTGCTCCCCTCCACACA-------TCCTACG-GCCTGAAATGCTCCTCCACTAACCCCTCTCTCATCCAACCCACTGCTGCC-ACCGCTGAGCT--CCCACGGGGCACATTGAATGCTGGGAAGGCCACA--CTCCCTACCTAGCATGAGTGCCGTGTTCGCGGATAAGCCGC--------------CAG-----------TAGGaaatcgtgactctgtgggtctggggtgagccctggg----attctgttttcacccaccttcccaggtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030905 303 + 64156825 ccctgctgcccattcccttttgctcttcc--------------cAGAAA----GCGGATGTGGCTGGTGCA--GCAGGT-GAACCCATCCTGCTCCCCTCCACACACGT-CATCCCTACG-GCCTGAAATGCTCCTCCTCTAACCCCTCTCTCATCCAACCTACTCCTGCC-ACTGCTGAGCT--CCCGCGGGGCACGCTGAAGGCTGTGGAGGC--CG--CTCCCTACCTAGCATGACCGCTGTGTTCACAGATAAGCCTC--------------CAG-----------TAGgaaactgtgactctgtgggtctggggtgggccctggg----agtctgttttcacccatcttcccaggtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55056477 303 + 59248254 CCCTGCTGCCCATTCCCTTTTGCTCTTCC--------------CAGAAA----GCGGATGTGGCTGGTGCA--GCAGGT-GAACCCATCCTGCTCCCCTCCACACACGT-CATCCCTACG-GCCTGAAATGCTCCTCCTCTAACCCCTCTCTCATCCAACCTACTCCTGCC-ACTGCTGAGCT--CCCGCGGGGCACGCTGAAGGCTGTGGAGGC--CG--CTCCCTACCTAGCATGACCGCTGTGTTCACAGATAAGCCTC--------------CAG-----------TAGGaaactgtgactctgtgggtctggggtgggccctggg----agtctgttttcacccatcttcccaggtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47158783 303 + 51301725 CCCTGCTGCCCATTCCCTTTTGCTCTTCC--------------CAGAAA----GCGCATGTGGCTGGTGCA--GCAGGT-GAACCCATCCTGCTCCCCTCCACACACGT-CATCCCTACG-GCCTGAAATGCTCCTCCTCTAACCCTTCTCTCATCCAACCTACTCCTGCC-ACTGCTGAGCT--CCCGTGGGGCACACTGAAGGCTGTGGAGGC--CG--CTCCCTACCTAGCATGACCGCTGTGTTCACAGATAAACCTC--------------CAG-----------TAGGAAACTGTGACTCTGTGGGTCTGGGGTGGGCCCTGGG----AGTCTGTTTTCACCCATCTTCCCAGGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46863017 303 + 50890351 CCCTGCTGCCCATTCCCTTTTGCTCTTCC--------------CAGAAA----GCGGATGTGGCTGGTGCA--GCAGGT-GAACCCATCCTGCTCCCCTCCACACACGT-CATCCCTATG-GCCTGAAATGCTCCTCCTCTAACCCCTCTCTCATCCAACCTACTCCTGCC-ACTGCTGAGCT--CCCGCGGGGCACGCTGAAGGCTGTGGAGGC--CG--CTCTCTACCTAGCATGACCGCTGTGTTCACAGATAAGCCTC--------------CAG-----------TAGGAAACTGtgactctgtgggtctggggtgggccctggg----agtctgttttcacccatcttcccgggtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45445596 299 + 49145316 TCCTGCTGCCGGTTCCCTTCTGCTCCTCC--------------TCGAAA----GCTGATGTGGCTGGTGCA--GTCTGCAGAACCCAGCCTGCTCCTCTCCACACA--T-GGTCCCTACG-GCCTGAAATGCTCCTCCTCTAACCC--CTCTCACCCAGCCCACTCCTGCC-ACTGCTAAGCT--CTTGCAGGGAACACTGAATGCTGGGGAGCC--CA--CTGCCTACCTAGCATGACCACTGGGTTCACTGATAAGCCGC--------------CAG-----------GAGGAAACCATGACTCTGTGGGTCT-TGGTGGGCCCTGGG----AGTCTGTATTCACTCGTTTTCCCAGGAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3690308 333 + 145441459 CCCTATGGCCTGGCTTCCGTTGCCCTTTCAACCACGTGTTATTCAGAAAGTGCGTGGACGTGGCAAGCATA--GTTTGCAATGCCCAGCCTGTTCCTATCTACATGTGTAGGTTCGTACACACCCAAAAGGCACTTCTTCCAA-----TGCACAGCTGACCAATCTCTGCCTAATGTTGTGTC--TGCCATAAGAACAAAGATGTCTGGAGAAAC--CA-GTTCTCCACCTGGCTGGAC-----TGTCCATGGCTACGTTGCTGGAGCCTAGAACATAG-----------CAAGAGCTCACGACTGTTGTAGTCTGGGCTAGGCACTGAGGACCACTCACTTCTTGCCC-TTTTCTTAGGTG i mm10.chr7 I 1564 I 219 s canFam3.chr1 19648249 313 - 122678785 --CTTGGGCCCATTCCCCTTCCTTCTCCCGA------------TGTACA----CTCGCTATGGCTGGCACACCGTTGATGCAACCCAGCCTGCTcccttccacaccc---tggtcctaca-tcctgaaaggctctccctccaa-----ctctttgctgaccaactcctgcc-tgtccttGCCTTGCCACCCGAGAACCTGGGACGCTGAGGACAC--TGGGTTCACAACCTTGTGTGACTTTCCTGTGCCCTGATATGTTGC--------------TGGAGCCTTGCACATGGGaaatcctgacttt-tcagtctggggtggggcctggg----aatctgctttcactcattctcccaggtg i canFam3.chr1 C 0 C 0 a score=2637026.000000 s hg38.chr19_GL949747v2_alt 161756 774 + 729520 atTAGGAGCCAGACCTGGA---TGCCctagtttt---gttccctt-caccaagtaccttctccccagagctggtttttctcctttgcaaaatagctggctac----agagattcaaggacagcatgttggtaaaccacccagctg----ggcctctggcacaccgcaagcacccaatGGCACCTACTGTTACC-TATGTGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTGCCCAAGGGCATGTGAATGGGGAATGCTGTGCCCAGGGCAGCAAGTGAGGTGACGTCCCAC-CCCCAGGGTGTGTTGGAGGTAAAATCCCG--------------------GGGAGCCACT---GAAGGGG-------------GAGGTAAAGT-GGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGTGGCAAGCCCCGAGTCTGACCTTCAGCGTCAGCAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGGAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAAGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGCGCACTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCATTCACTCCACGAGTCCAGCCACCAATCCTCCCCCAGCTCTCCCCATTCGTTTAGAGACAGAAACACAGAAGGGCAGAGAG----GACAGGAGGGTGGATGTAGGGACCGAATGAGTATGATTGAAACAGTGGGAGAAGAGGCTCAGCCACATAGAAACACACACCAACAG---AGAAT-------GA----GGTTAAGAGAAGCTTCAGG s panTro4.chr19 59094459 777 + 63644993 atTAGGAGCCAGACCTGGA---TGCCctagtttt---gtgccctt-caccaagtaccttctccccagagctggtttttctcctttgcaaaatagctggctac----agagattcaaggacagcatgttggtaaaccacccagctg----ggcctctggcacaccgcaagcacccaatGGCACCTACTGTTACCCTGTGTGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTGCCCAAAGGCATGTGAATGGGGAATGCTGTGCCCAGGGCAGCAAGTGAGGTGACGTCCCAC-CCCCAGGGTGTGTTGGAGGTAAAATCCCG--------------------GGGAGTCGCT---GAAGGGG-------------GAGGTAAAGT-GGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGTGGCAAGCCCCGAGTCTGACCTTCAGCGTCAGCAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGGAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAAGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGCGCGCTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCACTCACTCCACGAGTCCAGCCACCAATCCTCCCCCAGCTCTCCCCATTCGTTTAGAGACAGAAACACAGAAGGGCAGAGAG--AGGACAGGAGGGTGGATGTAGGGACGGAATGAGTATGATTGAAACAGTGGGAGAAGAGGCTCAGCCACATAGAAACACACACCAACAG---AGAAC-------GA----GGTTAAGAGAAGCTTCGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55971907 781 + 60714840 atTAGGAGCCAGACCTGGA---TGCCctagtttt---gtgccctt-caccaagtaccttctccccagagctggtttttctcctttgcaaaatagctggctgc----agagattcaaggacagcatgttggtaaaccacccggctg----ggcctctggcacaccgcaagcacccagtGGCACCTACTGTTACCCTATGTGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTGCCCAACGGCATGTGAATGGGGAATGCTGTTTCCAGGGCAGCAAGTGAGGTGACGTCCCAC-CCCCAGGGTGTGTTGGAGGTAAAATCCCA--------------------GGGAGCCGCT--GGAGGGGG-------------GAGGTAAAGT-GGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGCGGCAAGCCCCAAGTCTGACCTTCAGTGTCAGCAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGGAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAAGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGCACGCTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCGCTCACTCCACGAGTCCAGCCACCAATCCTCCCCCAACTCTCCCCATTCGTTTAGAGACAGAAACACAGAAGGGCAGAGAG--GGGACAGGAGGGTGGACGTAGGGACAGAATGGGTATGACTGAAACAGTGGGAGAAGAGGCTCAGCCACACAGAAACACACACCAACAGACAAGAAT-------GA----GGTTAAGAGAAGCTTCGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102741444 779 - 106955855 atTAGGACCTAGACCTGGA---T-CCctagtttt---gtgccctt-caccaagtaccttctccccagagctggtttttctcctttgcaaaatagctggctac----agagattcaaggacagcatgttggtaaaccacccagctg----ggcctctggcacaccgcaagcacccagtGGCACCTACTGTTACACTATGTGGGT-------------TATTTCCCCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTGCCCAAGGGCATGTGAATGGGGAATGCTGTGCCCAGGGCAGCAAGTGAGGTGACGCCCCAC-CCCCAGGGTGTGTAGGAGGTAAAATCCCG--------------------GGGAGCCGCT---GGAGGGG-------------GAGGTAAAGT-GGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGTGGCAAGCCCCGAGTCTGACCTTCAGCGTCAGCAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGGAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAGGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGCGCGCTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCACTCACTCCATCAGTCCAGCCACCAATCCTCCCCCAACTCTCCCCATTCGTTTAGAGACAGAAACACAGAAGGGCAGAGAG--AGGACAGGAGGGTGGATGTAGGGACGGAATGAGTATGATTGAAACAGTGGGAGAAGAGGCTCAGCCACATAAAAACACACACCAACAGAGAAGAAT-------GA----GGTAAAGAGAAGCTTTGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60031208 777 + 64156825 actAGGAGCCAGACCTGGA---TGCCctagtttt---gtgccctt-caacaagtaccttttccccagagctggtttttctcctttgcagaatagctagctac----agagattcaaggacagcatgttggtaaaccacccggctg----ggcctctggctcacagcaagcacccaatGGCACCTACTGTTACCCCACATGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTG-CCAAGAGCATGTGAATGGGGAACCCCATGCCCAGGGCAGC-AGTGTGGTGGCGGCCCAC-CCCCAGGGTGTGCAGGAGGTAAAATCC----------------------CGGAGCGGCT---GGAGGGG-------------GAGGTAAAGTGGGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGTGGCAAGCCCCGAGTCTGACCTTCAGTGTCAGTAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGCAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAAGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGTGCGTTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCACCCACTCCCCGAGTCCAGCCACCAATCCTCCCCCAACTCTCCCCATTCATTCAGAGACAGAAACACAGAAGGGCAGAGAGAGAGGACTGGAGGGTGGATGTAGGGACGGAATGAGTATGATTGAAATG--GGGAGAAGAGGCTCAGCCACACAGAAACACACAGCAACAGAGAAGAAC-------GA----GATTCAGAGAAGCTTCAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55056780 777 + 59248254 aCTAGGAGCCAGACCTGGA---TGCCCTAGTTTT---GTGCCCTT-CAACAAGTACCTTTTCCCCAGAGCTGGTTTTTCTCCTTTGCAGAATAGCTAGCTAC----AGAGATTCAAGGACAGCATGTTGGTAAATCACCCCGCTG----GGCCTCTGGCTCACAGCAAGCACCCAATGGCACCTACTGTTACCCCACATGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTG-CCAAGAGCATGTGAATGGGGAACCCCATGCCCAGGGCAGC-AGTGTGGTGGCGGCCCAC-CCCCAGGGTGTGCAGGAGGTAAAATCC----------------------CGGAGCGGCT---GGAGGGG-------------GAGGTAAAGTGGGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGTGGCAAGCCCCGAGTCTGACCTTCAGTGTCAGTAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGCAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAAGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGTGCGTTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCACCCACTCCCCGAGTCCAGCCACCAATCCTCCCCCAACTCTCCCCATTCATTCAGAGACAGAAACACAGAAGGGCAGAGAGAGAGGACTGGAGGGTGGATGTAGGGACGGAATGAGTATGATTGAAATG--GGGAGAAGAGGCTCAGCCACACAGAAACACACAGCAACAGAGAAGAAC-------GA----GATTCAGAGAAGCTTCAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47159086 777 + 51301725 ACTAGGAGCCAGACCTGGA---TGCCCTAGTTTT---GTGCCCTT-CAACAAGTACTTTTTCCCCAGAGCtgctttttctcctttgcaaAATAGCTAGCTAC----AGAGATTCAAGGACAGTATGTTGGTAAACCACCCAGCTG----GGCCTCTGGCTCACAGCAAGCACCCAATGGCACCTACTGTTAACCCACATGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTG-CCAAGAGCATGTGAATGGGGAACCCCATGCCCAGGGCAGC-AGTGTGGTGGCGGCCCAC-CCCCAGGGTGTGCAGGAGGTAAAATCC----------------------gggagcggct---ggagggg-------------gaggtaaagtggggag----gtgaaggggcccacagggaggctggagg-ggagTGGCAAGTCCCGAGTCTGACCTTCAGCGTCAGTAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGCAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAGGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GAG-CAAAAGCAGGAGGTGCGTTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCACCCACTCCCCGAGTCCAGCCACCAATCCTCCCCCAACTCTCCTCATTCATTCagagacagaaacacagaagggcagagagagaggacTGGAGGGTGGATGTAGGGACGGAATGAGTATGATTGAAATG--GGGAGAAGAGGCTCAgccacacagaaacacacagcaACAGAGAAGAAC-------GA----GGTTCAGAGAAGCTTCAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46863320 777 + 50890351 aCTAGGAGCCAGACCTGGA---TGCCCTAGTTTT---GTGCCCTT-CAACAAGTACCTTCTCCCCAGAACTGGTTTTTCTCCTTTGCAGAATAGCTAGCTAC----AGAGATTCAAGGACAGCATGTTGGTAAACCACCCAGCTG----GGCCTCTGGCTCACAGCAAGCACCCAATGGCACCTACTGTTACCCCACATGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTG-CCAAGAGCATGTGAATGGGGAACCCTATGCCCAGGGCAGC-AGTGTGGTGGCGGCCCAC-CCCCAGGGTGTGCAGGAGGTAAAATCC----------------------GGGAGCGGCT---GGAGGGG-------------GAGGTGAAGTGGGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGTGGCAAGCCCCGAGTCTGACCTTCAGCGTCAGTAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGCAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAGGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGTGCGTTGTGTTGGGCACAGAAGTCTCAGCCTTGGCCACCCACTCCCCGAGTCCAGCCACCAATCCTCCCGCAACTCTCCCCATTCATTCAGAGACAAAAACACAGAAGGGCAGAGAGAGAGGACTGGAGGGTGGATGTAGGGATGGAATGAGTATGACTGAAATG--GGGAGAAGAGGCTCAGCCACACAGAAACACACAGCAACAGAGAAGAAC-------GA----GGTTCAGAGAAGCTTCAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45445895 765 + 49145316 TGAAGGAGCCAGACCTGGG---TGTCCTAGTTTTTGAAGGTACTT-CACCAAGTACCTTCTCCCCAGAGCTGGTTTTTCTCCTTTGCAACACAGCTGGCTGC----AGAGATTCCAGGAGAGCACGTGAGTAAA-CACCCAGCTG----GGCCTCTGGCACACCACAAGCACTTAATGGCACTGACTGTTACCCTCCATGGGC-------------CATTTCTTCACCCCA-GGAGGGGCTGAGAGGTGAAGACCTGCCCAGGGGCATGTGAATGGGGAATCCTA--CCCAGGGCAGCAGGTGGGGTGATGTCCCAC-CCCCAGGGTGTGTGGGAGGTAAAATCCCC--------------------CGGAGCAGCT---GGAGGGGAGTAGTGAGCCCCGAGTCAGAGTAGTGAGCCCCGAGTCGGAG----TAGTGAGCCCCGAGTCGGAGTAGTGAGCCCCGAGTCTGACCTTCAGCGTGAGCAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTAGGCAGGCCCAGCAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAAGTCCAGGCCAGGGCCAGAGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGCGCGTCGTGGTGGGCACAGAGGTCTCGGCCTTGGCCTCCC-----------------------TGTCCCCCAGCTCTCCCCATTCGTTCAGAGACAGAA--ACAGACGGGCAGAGAG--AGGACTGGAGGGTGGATG--GAGATGGAATGAGTATGACTGAAAC---GGGAGAAGAGGCTCAGCCACACAGAAACACACAGCAACAGAGAAGAAT-------GA----GGTTCAGAGGAGCTTCGGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3690860 723 + 145441459 atgaaaaaCCAAACCTGCACTTTGTCCCAGCTTT---GAGCCCTTGGGCCGGATACCTTCTCTATAGAG-TAATTTTCCTCCTTGG-AGGACGGTTTGCTAC------AGACTCAAGAAGAGCATGTTAGCAAAACACACTGGGGAGGAAGATTCTAGGT--------GTGCCAAATGGC---TTGTGATAGAGCACTCAGGT-------------TATCTCCTTATCCTG-CAATGAGTGGAGAGGTGAAGACTTGCTCCAGAGGATGTGGGAGGTGAACTCTGTCCCCAG-------GGAGAAATGAAGTCCCAA-GCTTAGGGTTTGTGAAAGATAAAACTCCACAGCCCT--CCCCCTACTATGAGAAAGTCT---GGGAGGA-------------GA----AAGCAAGGAG----GCTCCCCAGCTCCCAGGGAGACTAAAA--GAAGTAGTGTTCGCCAAGTCTCACCTTCAGTGTCAACAGCAGCTGGACAGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGCAGGCTGAGGGCTCGGAAGAAGAGGAGATAGGAGAAGGTCCAGGCAAGAGCCAGGGCATGGCAGGAGCTAGGA-CAGAGGTGGGAAGT-CATAATGTTGGGTACAGGGACCTTAGCCTCTGTTTCCTTCTCCTGAGAT----------ACCCACCCCCGCCCCTGCCCA--CATTCAGACAGAGAA-----GAAGAGGTGAGAA----GACTGGTGAGT-----------------------------AACAGAGACAGAAGAGGCACAGCCAGAGATA-------------AGAAAAGAAT-------GACCGGCATTAAGAGAAGCTTCTGG i mm10.chr7 I 219 I 59 s canFam3.chr1 19648562 700 - 122678785 atAAAGAGCCAGACATCGG---TGTCCTGGTTCT---GTGCCCTT-AGAGAAGTGCTTTCTCTCCAAAGCTGTTTCTCCTACCTTGCTAAATGGTTTGCTACCAACACATGCTCCTGGAGAACACGTTGGTAAAGCACTTAGCT-----CACCTCTGGCAAATGGCAAACACC----------TACGGTTACATTACATAGATGGGGGTGTGGGTGTACTTCTCTACCCCAGGGAATAGCTGAGAGGTGAAGATCTGCCCCAGAGCATG------------------------------AAGGAGGTACCTTCCCACGTCCTGGGGTGCGGGGGAGGTAAGACCCCACTTCCCCTGCTCCCCAC---GGGAGTAGGTCGGGAAGGAG-------------GAGGTGAAAA-TGGGA----GTTCAAGGGTACAAAGAGGGGCTGGAGG-GG--------------CATCTGACCTTGAGTGTGAGCAGCAGCTGAACCGCATTGGTGAAGGGTGTGGGGGTGGGGAGGCCCAGCAGGCCGAGCGCACGGAAGAACAGCAGGTACGAGAAGGTCCAGGCCAGGGCGAGGGCGTGGCAGGAGCT-GGGACAGAGGAAGGCCGCAGGCTGTGTTTGGTGCAGGGCCCTT-GCCTCTGCCTCCC----CCAGAGTCTAGCTCCAGAACCTCCCCCACCACCACTCC-------------------------------------AAAAATGGGGGGTGGT--------------------------------AGAAGAAGGGGCGCAGCCCCACAGAAATGTGCCATGCCAGAGAAGAGCATGAGAAGG----GGTCAGGAGAAGCTTTAGG i canFam3.chr1 C 0 I 1 a score=402706.000000 s hg38.chr19_GL949747v2_alt 162530 126 + 729520 TGAAGACCCTGCAATCCTCCACTTTTTCTTTATTTCCGAGGTCCAGGGCTCAAGAAGAGAGAGGTGGATATGA-ATGAATATGAACGGTGGCCAGGCCAGCAGACACACTGTCCACCTCTCTCCATG---- s panTro4.chr19 59095236 126 + 63644993 TGAAGACCCTGCAATCCTCCACTTTTTCTTTATTTCCAAGGTCCAGGGCTCAAGAAGAGAGAGGTGGATATGA-ATGAATATGAACGGTGGCCAGGCCAGCAGACACACTGTCCACTTCTCTCCATG---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55972688 126 + 60714840 TGAAGACCCTGCAATCCTCCACTTTTTCTTTATTTCCAAGGTCCAGGGCTCAGGAAGAGAGAGGTGGATATGA-ATGAATATGAACGGTGGCCAGGCCAGCAGACACACTGTCCACCTCTCTCCATG---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742223 126 - 106955855 TGAAGACCCTGCAATCCTCCACTTTTTCTTTATTTCCAAGGTCCAGGGCTCAAGAAGAGAGAGGTGGATATGA-ATGAATATGAACGGTGGCTGGGCCAGCAGACACAACGTCCACCTCTCTCCATG---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60031985 126 + 64156825 TGAAGACCCTGCACTCCTCCACTTTTTCTTTATTTCCAAGGTCCAGGGCTCAAGAAGAGGGGGGTGGATATGA-ATGAATATGAACGGTGGCAGGGCCAGCAGACACACCATCCACCTCTCTCCATG---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057557 126 + 59248254 TGAAGACCCTGCACTCCTCCACTTTTTCTTTATTTCCAAGGTCCAGGGCTCAAGAAGAGGGGGGTGGATATGA-ATGAATATGAACGGTGGCAGGGCCAGCAGACACACCATCCACCTCTCTCCATG---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47159863 126 + 51301725 TGAAGACCCTGCACTCCTccgctttttctttatttccaaggTCCAGGGCTCAAGAAGAGGGGGGTGGATATGA-ATGAATATGAACGGTGGCAGGGCCAGCAGACACACCATCCACCTCTCTCCATG---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46864097 126 + 50890351 TGAAGACTCTGCACTCCTCCGCTTTTTCTTTATTTCCAAGGTCCAGGGCTCAAGAAGAGGGGGGTGGATATGA-ATGAATCGCAACGGTGGCAGGGCCAGCAGACACACCATCCACCTCTCTCCATG---- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45446660 122 + 49145316 TGAAGACCCTGCAATCCTTCACTTTTTCTTTATTTCCAAGGTCCAGGGCTCAAGAAGAGGGGGCTGGAT-----ATGAATATGAATGGTGGCGGGGCCAGCAGACACACTGTCCTTTTCTCTCCATG---- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19649263 125 - 122678785 TGAAAACCCACAGGGCCTCCATCTTTTCTG------CAGGAGGCGAGAAAAAAGGAGGGAGAAAGAGACATAATACAAACACGAATGGTGGCAGGGCCAGCACACAAACGCCCCTTCCTCCTGAATACAGG i canFam3.chr1 I 1 C 0 e mm10.chr7 3691583 59 + 145441459 I a score=125141.000000 s hg38.chr19_GL949747v2_alt 162656 35 + 729520 ACATGGATGTAGCGGACTGGGACAAACACACAGGG s panTro4.chr19 59095362 35 + 63644993 ACATGGATGTAGCGGACTGGGACAAACACACAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55972814 33 + 60714840 ACATGGATGTAGCGGACTGGGACAA--ACACAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742349 35 - 106955855 ACGTGGATGTAGCGGACTGGGACAAACACACAGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032111 35 + 64156825 ACATGGATGTAGCGGACTGGGACAAACACACAGGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057683 35 + 59248254 ACATGGATGTAGCGGACTGGGACAAACACACAGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47159989 35 + 51301725 ACATGGATGTAGCGGACTGGGACAAACACACAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46864223 35 + 50890351 ACATGGATGTAGCGGACTGGGACAAACACACAGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45446782 28 + 49145316 ACATAGATGTAGCAGACTGGGACAAACA------- i calJac3.chr22 C 0 C 0 s mm10.chr7 3691642 35 + 145441459 ACATGGATACTGAGGACTGGGGCAAAGACACAAGG i mm10.chr7 I 59 I 24 s canFam3.chr1 19649388 31 - 122678785 ATCTGGATGTTAAGGATCAGGTCAATCGCAC---- i canFam3.chr1 C 0 C 0 a score=230043.000000 s hg38.chr19_GL949747v2_alt 162691 91 + 729520 ACCAGACGCAGAAGGCAGGGGAGAAAGAAAAGCAGATGA--Aggccggatacggtggctcacgcctgtaatcccagcactttggaaggctgag s panTro4.chr19 59095397 91 + 63644993 ACCAGATGCAGAAGGCAGGGGAGGAAGAAAAGCAGATGA--Aggccggatgcggtggctcacgcctgtaatcccagcactttggaaggctgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55972847 91 + 60714840 ACCAGACACAGAAGGCACGGGAGGAAGAAAAGCAGATGA--Aggccgggcgcagtggctcaagcctgtaatcccagcactttgggaggctgag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742384 91 - 106955855 ACCAGACGCAGAAGGCAGGGGAGGAAGAAAAGCAGATGA--Aggccgggcgcggtggctcacgcctgtaatcccagcactttgggtggctgag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032146 93 + 64156825 ACCAGATGCAGAAGGCGGGGGAGGAAGAAAAGCAGATGAAGAggctgggtgtggtggctcacgcccgtaattccagcactttgggaggctgag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057718 93 + 59248254 ACCAGATGCAGAAGGCGGGGGAGGAAGAAAAGCAGATGAAGAggctgggtgtggtggctcacgcccgtaattccagcactttgggaggctgag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47160024 93 + 51301725 ACCAGATGCAGAAGGCGGGGGAGGAAGAAAAGCAGATGAagaggctgggtacggtggctcacgcccataattccagcactttgggaggctgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46864258 93 + 50890351 ACCAGATGCAGAAGGCGGGGGAGGAAGAAAAGCAGATGAAGAggctgggtatggtggctcatgcccgtaattccagcactttgggaggctgag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45446810 83 + 49145316 --------CAGAAGGCAACGGGGGAAGAGAAACAGATGA--Gggccaggccaagtggctcatgcctgtaatcccagcactttgggaggtgaag i calJac3.chr22 C 0 C 0 s canFam3.chr1 19649419 9 - 122678785 ------------------------------------------------------------------------------------AGGGATGAG i canFam3.chr1 C 0 C 0 e mm10.chr7 3691677 24 + 145441459 I a score=261103.000000 s hg38.chr19_GL949747v2_alt 162782 96 + 729520 gtgggcagatcac--aaggtcaggagttcgagatcagcctgaccaacatggagaaaccccgg----------------------------------------------------------------------------------------ctctattaaaaattcaagattagccaggcgtggtgg s panTro4.chr19 59095488 96 + 63644993 gcgggcagatcac--aaggtcaggagttcgagatcagcctgaccaacatggagaaaccccgg----------------------------------------------------------------------------------------ctctattaaaaattcaaaattagccaggcgtggtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55972938 96 + 60714840 gcgggcagatcac--aaggtcaggagttcgagatcagcctgaccaacacggagcaaccccgt----------------------------------------------------------------------------------------ctctactaaaaattcaaaattagccaggcgtggtgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742475 96 - 106955855 gcgggcagatcac--aaggtcacgagttcgagatcagcctgaccaacatggagaaaccccgt----------------------------------------------------------------------------------------ctctactaaaaattcaaaattagccaggcgtggtgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032239 96 + 64156825 gcaggcagatcac--aaggtcaggagttcgaaaccagcctgaccaacatggagaaaccccat----------------------------------------------------------------------------------------ctctactgaaaatacaaaattagccaggcatggtgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057811 96 + 59248254 gcaggcagatcac--aaggtcaggagttcgaaaccagcctgaccaacatggagaaaccccat----------------------------------------------------------------------------------------ctctactgaaaatacaaaattagccaggcatggtgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47160117 96 + 51301725 gcaggcagatcac--aaggtcaggagttcgaaaccagcctgaccaacatggagaaaccccat----------------------------------------------------------------------------------------ctctactaaaaatacaaaattagccaggcatggtgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46864351 96 + 50890351 gcaggcagatcac--aaggtcaggagttcgaaaccagcctgaccaacatggagaaaccccat----------------------------------------------------------------------------------------ctctactaaaaatacaaaattagccaggcatggtgg i chlSab2.chr6 C 0 I 1731 s calJac3.chr22 45446893 186 + 49145316 gcaggcggatcacctgaggtcaggggttcgagacacacctggccaacatggagaaacccagtctctttttttaaaattgtttttattttttaaaCTTTTTACCTGTAATTTACAACCATTTTCTTTTTCTTCTTATTTATTTGCTTCAGCctctactaaaaatataaaattagccaggcgtggtgg i calJac3.chr22 C 0 C 0 e mm10.chr7 3691677 24 + 145441459 I e canFam3.chr1 19649428 0 - 122678785 C a score=122931.000000 s hg38.chr19_GL949747v2_alt 162878 53 + 729520 agcatgcctgtagtcccagctacttgggaggctgaggcaagagaatcgcttga s panTro4.chr19 59095584 53 + 63644993 agcatgcctgtaatcccagctacttgggaggctgaggcaagagaatcgcttga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973034 53 + 60714840 cgcatgcctgtaatcccagctactcgggaggctggggcaagagaatcgcttga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742571 53 - 106955855 cgcatgctggtaatcccagctactcgggaggctggggcaagagaatcgcttga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032335 53 + 64156825 tgcatgcctgtaatcccagctacgcgagaggctggggcaagagaatcgcttga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057907 53 + 59248254 tgcatgcctgtaatcccagctactcgagaggctggggcaagagaatcgcttga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47160213 53 + 51301725 tgcatgcctgtaatcccagctactcgggaggctggggcaagagaatcgtttga i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45447079 53 + 49145316 cgcatgcctgtaatcccagttactcaggaggccgaggcaggagaatcacttaa i calJac3.chr22 C 0 C 0 e mm10.chr7 3691677 24 + 145441459 I e canFam3.chr1 19649428 0 - 122678785 C e chlSab2.chr6 46864447 1731 + 50890351 I a score=83384.000000 s hg38.chr19_GL949747v2_alt 162931 39 + 729520 accc-gggaggtggaggttgcagtgagccaagatcgtgcc s panTro4.chr19 59095637 39 + 63644993 accc-gggaggtggaggttgcagtgagccaagatcgtgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973087 39 + 60714840 accc-gggaggtggaggttgcagtgagccgagatggcgcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742624 39 - 106955855 accc-gggaggtggaggttgcagtgagccaagatcgcgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032388 39 + 64156825 acct-gggaggtggaggttgcagtgagctgagatcgcacc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057960 39 + 59248254 acct-gggaggtggaggttgcagtgagctgagatcgcacc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47160266 39 + 51301725 accc-gggaggtggaggttgcagtgagctgagatcgcacc i papAnu2.chr19 C 0 M 776 s calJac3.chr22 45447132 40 + 49145316 acccggggaggtggaggtggcagtgagctgagattgtacc i calJac3.chr22 C 0 C 0 s canFam3.chr1 19649428 9 - 122678785 ACCC-AGAAG------------------------------ i canFam3.chr1 C 0 C 0 e mm10.chr7 3691677 24 + 145441459 I e chlSab2.chr6 46864447 1731 + 50890351 I a score=121053.000000 s hg38.chr19_GL949747v2_alt 162970 105 + 729520 actgaactgcagcctgggcaacaggagcgaaactccatctc-aaaaagaaagaaagaaagaaaaacaaacaaACAAACAAACATGAAACAGAGAAATGAGCTGATC s panTro4.chr19 59095676 93 + 63644993 actgaactgcagcctgggcaacaggagcgaaactccatctc-aaaaagaaagaaagaaa------------aacaaacaaaCATGAAACAGAGAAATGAGCTGATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973126 104 + 60714840 actgaactgcagcctgggcgacaggagcgaaactccatctcaaaaaaaaaagaaagaaagaaaagaaaa--aaATAACAAACATGAAACAAAGAAATGAACTGATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742663 95 - 106955855 actgaactgcagcctgggcaacaggagcgaaactccatctc-aaaaagaatgaaagaaaga----------aacaaacaaaCACGAAACAGAGAAATGAGCTGATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032427 99 + 64156825 attgaactccagcctgggcaataagagcgaaactccatctcaaaaaagaaagacagaaagaaaa-------aaaaaaaAAACATGAAACAGAGAAGGGAGCTGATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057999 99 + 59248254 attgaactccagcctgggcaataagagcgacactccatctcaaaaaagaaagaaagaaagaaag-------aaaaaaaAAACATGAAACAGAGAAGGGAGCTGATC i macFas5.chr19 C 0 C 0 s calJac3.chr22 45447172 86 + 49145316 actgctctccagcctgggcaacaagagtgaatttccgtctcagaaaagaaaagaaga--------------aaCAG------ATGACACAAAGAAACAAACTGGTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19649437 54 - 122678785 ------------------------------------------AAAAGGCACGAGAGGAAGAGA--------AACAGACCAA-ACGACACAGTGAGTTCAGA-GATA i canFam3.chr1 C 0 C 0 e mm10.chr7 3691677 24 + 145441459 I e chlSab2.chr6 46864447 1731 + 50890351 I e papAnu2.chr19 47160305 776 + 51301725 M a score=176406.000000 s hg38.chr19_GL949747v2_alt 163075 91 + 729520 AACAAG--------AGACAGCTAGAGATGAGGCAGAAGCTGAAAAAGACTCAAAGAGGAAACAGGTTGCTTCCC----------cctctcccctcctctccctctcctc s panTro4.chr19 59095769 91 + 63644993 AACAAG--------AGACAGCTAGAGATGAGGCAGAAGCTGAAAAAGACTCAAAGAGGAAACAGGTTGCTTCCT----------CCTCTCCCCTCCTCTCCCTCTCCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973230 91 + 60714840 AACAAA--------AGACAGCCAAAGACGAGGCAGAAGCTGAGAAAGACTCAAAGAGGAAACAGGTTGCTTCCC----------CCTCTCCCCTCCTCTCCCTCTCCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742758 91 - 106955855 AACAAG--------AGACAGCCAGAGATGAGGCAGAAGCTGAGAAAGACTCAAAGAGGAAACAGGTTGCTTCCC----------cctctcccctcctctccctctcctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032526 99 + 64156825 AACAAGAGACAGCCAGACAGCCAGAGATGAGGCAGAAGCTGAAAAAGACCCAAAGAGGAAACAGGTTGCTTCCT----------CCTCTGCCCTCCTCTCCCTCTCCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55058098 99 + 59248254 AACAAGAGACAGCCAGACAGCCAGAGATGAGGCAGAAGCTGAAAAAGACCCAAAGAGGAAACAGGTTGCTTCCT----------CCTCTGCCCTCCTCTCCCTCTCCTC i macFas5.chr19 C 0 C 0 s calJac3.chr22 45447258 101 + 49145316 AACAAG--------AGACAGCCAGAGATGAGGCAGAAACTGAGAAAGACACAGAGAGGAAACAGGTTGCTTCCCTctttcccttcctctcccctcctctccctctcttc i calJac3.chr22 C 0 I 1268 s mm10.chr7 3691701 87 + 145441459 AGCGAC--------ACACAGTAAGAT-TAAAGGAGAAGAAATAGAAGACTCGAAGAGGAAACAGACTGCTGCTT-----------CTCTGCATCCTTCTTCCTTTCT-- i mm10.chr7 I 24 C 0 s canFam3.chr1 19649491 56 - 122678785 AGCAAG--------AGATGTCCAGAGA-----CAGAGGCAGAAAGGGAC----AGA---------------CCT----------CCTCCCCACTCCTC----------- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46864447 1731 + 50890351 I e papAnu2.chr19 47160305 776 + 51301725 M a score=411743.000000 s hg38.chr19_GL949747v2_alt 163166 128 + 729520 cctcCACCAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCGAGGATGGTGACCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAACAGGGTGAGCCCCAGGCCCACAGCGGCTGCTCC s panTro4.chr19 59095860 128 + 63644993 CCTCCACCAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCGAGGATGGTGACCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAACAGGGTGAGCCCCAGGCCCACAGCGGCTGCTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973321 128 + 60714840 CCTCCACCAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCGAGGATGGTGACCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAACAGGGTGAGCCCCAGGCCCACAGCGGCTGCCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742849 128 - 106955855 cctcCACCAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCGAGGATGGTGACCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAACAGGGTGAGCCCCAGGCCCACAGCGGCTGCCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032625 128 + 64156825 CCTCCACCAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCAAGGATGGTGATCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAACAGGGTGAGCCCCAGGCCCACAGCAGCTGCCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55058197 128 + 59248254 CCTCCACCAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCAAGGATGGTGATCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAACAGGGTGAGCCCCAGGCCCACAGCAGCTGCCCC i macFas5.chr19 C 0 C 0 s calJac3.chr22 45448627 128 + 49145316 cctccctcAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCGAGGATGGTGATCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAATAGGGTGAGCCCCAGGCCCACAGCAGCTGCCCC i calJac3.chr22 I 1268 C 0 s mm10.chr7 3691788 127 + 145441459 -CACCACCTAGTTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTTCCCAAGATGGTGATCAGAGAATGCAAACTGTGGGGGCCACAGGTGAATAAGGTGAGCCCCAGGCCCACAGCTGCTGCCCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19649547 128 - 122678785 CTCCCACCAAATCCTCACCAGGGCTGGGCCTGGATGAGGGCCCAGGTCCCAAGGATGGTGATCAGAGAATGCAAAGTGTGGGGGCCGCAGGTGAACAAGGTGAGCCCCAGGCCCACGGCTGCTGCCCC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46864447 1731 + 50890351 I e papAnu2.chr19 47160305 776 + 51301725 M a score=882135.000000 s hg38.chr19_GL949747v2_alt 163294 269 + 729520 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT---------------------CCCCCCCCTTTATTTTCCACTGGGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATACGTCCATTCTTCAGGCGACATGGTCTGGGGGAGGGGCAGAGATTCACAGTGAGAACCCAGGAATCCAGGCCCCCTGCCTCCTCCCTCTTCGAGGATCCAGGAACCCAG s panTro4.chr19 59095988 269 + 63644993 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT---------------------CCCCCCCCTTTATTTTCCACTGGGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATACGTCCATTCTTCAGGCGACATGGTCTGGGGGAGGGGCAGAGATTCACAGTGAGAACCCAGGAATCCAGGCCCCCTGCCTCCTCCCTCTTCGAGGATCCAGGAACCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973449 268 + 60714840 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT----------------------CCCCCCCTTTATTTTCCACTGGGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCAATGGGGATGGAGATAAGAAGAACCACTAGATATGTCCATTCTTCAGGCGACATGGTCTGGGGGAAGGGCAGAGATTCACAGTGAGAACCCAGGaatccaggccccctgcctcctccctctacgaggatccaggaatccag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742977 268 - 106955855 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT----------------------CCCCCCCTTTATTTTCCCCTGGGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATAGGTCCATTCTTCAGGCGACATGGTCTGGGGGAGGGGCAGAGATTCACAGTGAGAACCCAGGAATCCGGGCCCCCTGCCTCCTCCCTCTTCGAGGATCCAGGAACCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032753 268 + 64156825 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT----------------------CCCCCCCTTTATTTTCCACTGCGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATACGTCCATTCTTCTGGCGACATGGTCTGGGGGAGGGGCAGAGATTCACAGTGAGAACCCAGGAATCCAGGCCCCCTGCCTCCTCCCTCTTCCAGGATCCAGGAACCCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55058325 268 + 59248254 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT----------------------CCCCCCCTTTATTTTCCACTGCGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATACGTCCATTCTTCAGGCGACATGGTCTGGGGGAGGGGCAGAGATTCACAGTGAGAACCCAGGAATCCAGGCCCCCTGCCTCCTCCCTCTTCCAGGATCCAGGAACCCAG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46866178 268 + 50890351 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT----------------------CTCCCCCTTTATTTTCCACTGCGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATACGTCCATTCTTCAGGCGACATGGTCTGGGGGAGGGGCAGAGATTCACAGTGAGAACCCAGGAATCCAGGCCCCCTGCCTCCTCCCTCTTCGAGGATCCAGGAACCCAG i chlSab2.chr6 I 1731 C 0 s calJac3.chr22 45448755 229 + 49145316 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGAATAAGCCTGGAACCTTCCAGAGGGT----------------------CCCCCCC-TTATTTTCCACTGGGGAGGGAACCTGACTCACCAGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATACGTCCATTCTTCAGGAGACATGGTCTGGGGGAGGGGC--AGATTCACTGTGAGAACCCAGGAATCCAGG------------------------------------CAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3691915 233 + 145441459 CCATCTCTTCAGCCCAGGTCCTGAAAGGAAAAGGTAAAGTATAAGCCTAGAACCTTCGGGAGGGGTGATTCCCCACC---CCAGCTCCCTCACCCTAATTTTCCACTAGACAAGGAACCTGACTCACCAGCTTTCTTAAAGAGGAAGCCAACAGGGATGGAGATAAGAAGGACCATTAGATATGTCCATTCTTCGGGTGTCATGGTCTGGGGGAGG---AAGGACTCACAGTGAGAACC--------------------------------------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19649675 262 - 122678785 CCATCTCTTCAGCCCAGGTCCTGCAAAGAGAAGGGAGAGCATAAGCCTGGAACCTTCCAGGGAGC-----TCCTGCCGGGTTCCCCCCCCCTCCCCCAGTTTCCACTAGGGAGGGAACCTAACTCACCAGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATGAGAAGCACCACTAGATAAGTCCATTCTTCAGGCGACATGGTCTGGGGGAGGGGCAGAGGTTCCTAGTGAGGCCC-----------------------CTCCCCCCTGGAGGGTTCAGGAACCCAC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47160305 776 + 51301725 M a score=1690470.000000 s hg38.chr19_GL949747v2_alt 163563 542 + 729520 --CCTTCTAGACCCCAGTTTTTGAGGATGATGGAGTATGAGCCTCAGCTCCTCTCCTTTGAGAACCTAGCAACCCGGA-CTCCAGCCCCTTCCTCCTTGGAGGAGACAGGAATCCA-CCCCCAGCCC--CTCCTTT--GAGCGCACAGGCCTCCAGCTCTCCTGTCCTTGGAGAACCCAGGAAAGTGTGGGGATCTCCCAG--CACCCAAGCCCCTCCTTTGCGAACGCAGAAATCAAAGCTACTCCCCGCACCCATACTGGGGACCCAGATTTGAAGACGCCCCTCTTTTAAAAACCCAGAAACGGCACCCCTCCCGG-ACCCTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGAGCCCCCTCTTCCAG---CGAGGATCCAGGAACCCAGACCCCCTCTTTGGATCCCCCAT--CCCCCGGCCCTTGTGAAACCAGATATCCGGACC-CCCCAGCCCTTCT------TCGAGACCACCCAGAGGAGCCC-GGGTCTCCAACCT-GCACCTCCT----TCGGAGCTCCACACCCCTCTCCTACTGAGAACCCGGGGATCGAACACCC s panTro4.chr19 59096257 542 + 63644993 --CCTTCTAGACCCCAGTTTTTGA---TGATGGAGTCTGAGCCTCAGCTCCTCTCCTTTGAGAACCTAGCAACCCGGA-CTCCAGCCCCTTCCTCCTTGGAGGAGACAGGAATCCA-CCCCCAGCCC--CTCCTTT--GAGCGCACAGGCCTCCAGCTCTCCTGCCCTTGGAGAACCCAGGAAAGTGTGGGGATCTCCCAG--CACCCAAGCCCCTCCTTTGCGAACGCAGAAATCAAAGCTACTCCCCGCACCCATACTGGGGACCCAGATTTGAAGACGCCCCTCTTTTAAAAACCCAGAAACGGCACCCCTCCCGG-ACCGTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGAGCCCCCTCTTCCAG---CGAGGATCCAGGAACCCAGACCCCCTCTTTGGATCCCCCAT--CCCCCGGCCCTTGTGAAACCAGATATCCGGACC-ACCCAGCCCTTCT---CCTTCGAGACCACCCAGAGGAGCCC-GGGCCTCCAACCT-GCACCTCCT----TCGGAGCTCCAGACCCCTCTCCTACTGAGAACCCGGGGATCGAACACCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973717 545 + 60714840 --ccctctagaccccagtttttgaggatgatggagtccgagcctcagctcctctcctttgagaacctagcaacacaga-ctccagccccttcctccttggaggagacaggaatcca-cccccagccc--ctcctTT--GAGAGCACAGGCCTCCAGCTCTCCTCTCCTTGGAGAACCCAGGAAAGTGTGGGGATCTCCCAG--CACCCAGGCCCCTCCTTTGCGAACGCAGAAATCAAAGCTACTCCCCGCACGCATACTACGGACCCAGATTTGAAGACGCCTCTCTTTTAAAAACCCAGAAACAGCACCCCTCCCGG-ATCCTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGA-CCCCCTCTTCCAC---CGAGGATCCAGGAACCCAGACCACCTCTTTGGATCCCCCAT---CCCCGGCCCTTGTGAAACCAGATATCCGGACC--CCCAGCCCTTCTTCTCCTTCGAGACCACTCAGAGGATCCC-GGGCCTCCAGCCT-GCACCTCCT----TCGGAGCTCCAGACCCCTCTCCTACTGAGAACCCAGGGATCGAACACCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102743245 548 - 106955855 --CCCTCTAGACCCCAGTTTTTGAGGATGTTGAAGTCTGAGCCTCAGTTCCTCTCCTTTGAGAACCTAGCAACCCGGA-CTCCAGCCCCTTCCTCCTTGGAGGAGACAGGAATCCA-CCCCCAGCCCCTCTCCTTT--GAGCGCACAGGCCTCCAGCTCTCCTCTCCTTGGAGAACCCAGGAAAGTGTGGGGATCTCCCAG--CACCCAGGCCCCTCCTTTGCGAACGCAGAAATCAAAGCTACTCCCCGCACCCATACTGGGGACCCACATTTGAAGACGCCCCTCTTTTAAAAACCCAGAAACAGCACCCCTCCCGG-ACCCTTCCTCTTCGACAGCCCAGGAATCTAGACTTCCGAGCCCCCTCTTCCAG---AGAGGATCCAGGAACCCAGACCCCCTCTTTGGATCCCCCAT--TCCCCGGCCCTTGTGAAACCAGATATCCGGACCCCCCCAGCCTTTCT---CCTCCGAGACCACCCAGAGGAGCCT-GGGCCTCCAGCTT-GCGCCTCCT----TCGGAGCTCCAGACCCCTCTCCTACTGAGAACCCGGGGATCGAACACCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60033021 543 + 64156825 --CCCTCTAGACCCCAGTTTTTGAGGATGATGGagtccgagactcagctcctctcctttgagaacctaggaacccgga-ctccagccccttcctcctt---ggagacaggaatcca-cccccagcccctcTCCTAT--GAGCGCACAGGCCTCCAGCTCTCCTCTCCTTTGAGAACCCAGGAAAGCGTGGGGATCTCCCAG--CACCCAGGCGCCTCCTTTGCGAAGGCAGAAATCAAAGTTACTCCCTGCACCCATACTAGGGACCCAGATTTGAAGACGCCCCTCTTTTTAAAACCCAGAAACAGCACCCCTCCCAG-ACCCTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGAGACCCCTCTTCCAG---CGAGGATCCAGGAACCCAGACCCCCTCTTTGGATCCCCCAT--CCCCCAGCCCTTGTGAAACCAGATATCCGGACC-CCCCAGCCCTTGT---CCTTCGCGAGCACTCAGAGGAGCCC-GGGCCTCCAGCCT--CACCTCCT----TCGGAGCTCCAGACCCCTCTCCTACGGAGAACCCGGGGATCGGACACCC i rheMac3.chr19 C 0 M 287 s macFas5.chr19 55058593 543 + 59248254 --CCCTCTAGACCCCAGTTTTTGAGGATGATGGagtccgagactcagctcctctcctttgagaacctaggaacccgga-ctccagccccttcctcctt---ggagacaggaatcca-cccccagcccctcTCCTAT--GAGCGCACAGGCCTCCAGCTCTCCTCTCCTTTGAGAACCCAGGAAAGCGTGGGGATCTCCCAG--CACCCAGGCGCCTCCTTTGCGAAGGCAGAAATCAAAGTTACTCCCTGCACCCATACTAGGGACCCAGATTTGAAGACGCCCCTCTTTTTAAAATCCAGAAACAGCACCCCTCCCAG-ACCCTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGAGACCCCTCTTCCAG---CGAGGATCCAGGAACCCAGACCCCCTCTTTGGATCCCCCAT--CCCCCAGCCCTTGTGAAACCAGATATCCGGACC-CCCCAGCCCTTGT---CCTTCGCGAGCACTCAGAGGAGCCC-GGGCCTCCAGCCT--CACCTCCT----TCGGAGCTCCAGACCCCTCTCCTACGGAGAACCCGAGGATCGGACACCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47161081 543 + 51301725 --CCCTCTAGACCCCAGTTTCTGAGGATGATGGAGTCCGAGACTCAGCTCCTCTCCTTTGAGAACCTAGGAACCCGGA-CTCCAGCCCCTTCCTCCTT---GGAGACAAGaatcca-cccccagcccctctcctAT--GAGCGCACAGGCCTCCAGCTCTCCTCTCCTTTGAGAACCCAGGAAAGCGTGGGGATCTCCCAG--CACCCAGGCGCCTCCTTTGCGAAGGCAGAAATCAAAGTTACTCCCTGCACCCATACTAGGGACCCAGATTTGAAGACGCCCCTCTTTTTAAAACCCAGAAACAGCACCCCTCCCAG-ACCCTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGAGACCCCTCTTCCAG---CGAGGATCCAGGAAcccagaccccctctttggatcccccat--cccccagcccttgtgaaaccagatatccggacc-ccccagcccTTGT---CCTTCGCGAGCACTCAGAGGAGCCC-Gggcctccagcct--cacctcct----tcGGCGCTCCAGACCCCTCTCCTACAGAGAACCCGGGGATCGGACACCC i papAnu2.chr19 M 776 C 0 s chlSab2.chr6 46866446 529 + 50890351 --CCCTCTAGACCCCAGTTTTTGAGGATGATGGAGTCCGAGACTCAGCTCCTCTCCTTTGAGAACCTAG---------------GCCCCTTCTTCCTT---GGAGACAGGAATCCA-CCCCCAGCCCCTCTCCTAT--GAGCGCACAGGCCTCCAGCTCTCCTCTCCTTTGAGAACCCAGGAAAGCGTGGGGATCTCCCAG--CACCCAGGCGCCTCGTTTGCGAAGGCAGAAATCAAAGTTACTCGCTGCACCCATACTGGGGACCCAGATTTGAAGACGCCCCTCTTTTAAAAACCCAGAAACAGCACCCCTCCCAG-ACCCTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGAGACCCCTCTTCCAG---CGAGGATCCAGGAACCCAGACCCCCTCTTTGGATCCCCCAT--CCCCCGGCTCTTGTGAAACCAGGTATCCGGA-C-CCCCAGCCCTTCT---CCTTCGCGAGCACCCAGAGGAGCCCGGGGCCTCCAGCCT--CACCTCCT----TCGGAGCTCCAGACCCCTCTCCTACGGAGAACCCGGGGATCGGACACCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45448984 532 + 49145316 --CCCTCTGGACCCCAGTTTTTTAGGATTCCggagtccgagtctcag------------gagaacctaggaaccggga-ctccagctccttcctccttggaggagacaggaag--a-caggagactcctctcctttcagagtgcacagggctccAGCCCTCCT--CCTTTGAGAACGCAGGAAAGCGTGGGGCTCTCCCAG--CACCCAGGCCCCACCTTTTCAAATGCAGAAATCAAAGCTACTCCCTGCACCCATGCTGAAGACCCAGATTTGAAGACGCCCCTCCTTAAAAAACCCAGAAGCAGCACCCctcccgg-acccctcctctttgagagcccaggagtctagacgtccaagccccctcttccag---cgaggatccaggagcccagacccccTCTTTGCATCCCCCAT---CCCCGGCCCTTGTGAAACCAGATATTCGTAAC-CCCGAGCCCTTCT---CCTTCGAGAGCACCCAGAGGAGCCC-GGGGCTCCAGCCT-CCAACCTCT----TTGGCGCTCCAGACCCCTCTCCTATTGAGAATTCGGGGATCGGAGCCCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3692148 402 + 145441459 --------------------------------------------------------------------------AGTA-TTCCAGTCCCTTCCTCTTTTGAAGACAGTAGAAT----------------CCCCTTT--GAGAACCCAGGCCTCCAGCTCACTCCTCCTTCCAGGACCCAAGAA-------------TTAAG--CCCCCACCCCACCCCTTTGCCAATGTTGAAATCAAAAGTACTTC---TACTTCCATTTATGACCCACA-----------CCTTCC-------GGCCAGAAAAACAATCCTTCACAACACCCCTCTTCTCTGAGAGCCCAGGAATCTGTATCATCCTCACCCTCCT---------GAGTACATTGGAGCCC---------TTCTGGGTCCCCAATTTCCTCTGCGTCTTACAGGACCCAGTACTCCCACT-CCC--GCCCAGCT-----------------CGGAGAAGCCC--AGCATTTAGCATCCTGTTTTCTAAGCTCTGAGCTCTGGGCTCCTCTTTAACCCGTACCTCGGAGAGAAGGCAATG i mm10.chr7 C 0 C 0 s canFam3.chr1 19649937 470 - 122678785 TCCCCCGTAGTTCCCAGTTG-TGAGGGTCCTGGAGTCCTACCCTCAGCTCCTCTCCTCTGAGAACACGGAAATCTGTACCTCTAGAACCTTCCTCCTTCGAGGTTAAAGAAATCTACCCCCCAGCTCCGCTTTTCT--GAGAACCCGGGCCACCAGTCCTCTTCCCCTGTGAGAAC-CAGGAA-------------CCCAGACCTCTCAGGCCCTCTCTCTGCGATCCCAGAAATCAAAGCAACTCCCCCCGCCCCCACTGAGGTCCCAGGGATTGAGATATCGCTCT---GAGAACCCAGCAACAACCCTTGTCCCAG-GCCCTTCC-CTTGGAGAGCGCAGGATTCCAGATCTCCCGGCCTCCTCCTCCTCCTTCGAGGACCCAGCGACTCAACCCTCCC-------TCTCCGAT-----------------AACCCAGGT--------T-------------T-----------------------------CAGCCTCCAGCCT-CCACCTCCT----CCGGAGCTGCAGACCCTTCTCCCACCTGAAGCCCGGAGGACGGTCCACC i canFam3.chr1 C 0 C 0 a score=893877.000000 s hg38.chr19_GL949747v2_alt 164105 324 + 729520 TCCCCT-CCCCAGGCCCAGGC-CCAGGCCCAGCCCCAACCCGTCCCGCGCACCCCAGCGC------------ATCCCCGGCAGAGCCACAGGCGGTTGCGCCAGCCCCGAGTTCCAACGCGCCTCCGGGGCCG-C-CCCGCACCCGCCAGCCCGCAGAGACCCTGCCGCCGTGTAA-CCTCGCCTCGCCACTGGGCGCCGCCACCCTGGCCCACCTGA------------GCTGCTCGCCGGGCAGGAGGCGGCCGAGCAGTCCCAGCCCGCTTGCCGCCGCAGCTCCGGCCACGCCTCCCCCGCCCAGCGCGC----CCCCGCGCCGCCTGCTCCTTCTGGGCGC----CCGCCGGGCTG s panTro4.chr19 59096799 324 + 63644993 TCCCCT-ccccaggcccaggc-ccaggcccagccccaacccGTCCCGCGCACCCCAGCGC------------ATCCCCGGCAGAGCCACAGGCGGTTGCGCCAGCCCCGAGTTCCAACGCGCCTCCGGGGCCG-C-CCCGCACCCGCCAGCCCGCAGAGACCCTGCCGCCGTGTAA-CCTCGCCTCGCCACTGGGCGCCGCCACCCTGGCCCACCTGA------------GCTGCTCGCCGGGCAGGAGGCGGCCGAGCAGTCCCAGCCCGCTTGCCGCCGCAGCTCCGGCCACGCCTcccccgcccagcgcgc----ccccgcgccgccTGCTCCTTCTGGGCGC----CCGCCGGGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55974262 318 + 60714840 TCCCCT-------GCCCAGGC-CCAGGCCCAGCCCCAACCCGTCCCGCGCACCCCAGCGC------------ATCCCCGGCAGAGCCACAGGCGGTTGCGCCAGCCCCGAGTTCCAAAGCGCCTCCGGGGCCG-C-CCCGCACCCGCCAGCCCGCAGAGACCCTGCCGCCGTGTAA-CCTCGCCTCGCCACTGGGCGCCGCCACCCTGGCCCACCTGA------------GCTGCTCGCCGGGCAGGAGGCGGCCGAGCAGTCCCAGCCCGCTggccgccgcggctccggccacgcctcccccgcccagcgcgc----ccccgcgccgccTGCTCCTTCTGGGCGC----CCGCCGGGCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102743793 324 - 106955855 TCCCCT-CCCCAGGCCCAGGC-CCAGGCCCAGCCCCAACCCGTCCCGCGCACCCCAGCGC------------ATCCCCGGCAGAGCCACAGGCGGTTGCGCCAGCCCCGAGCTCCAACGCGCCGCCGGGCCCG-C-CCCGCACCCGCCAGCCCGCAGAGACCCTGCCGCCGTGTAA-CCTCGCCTCGCCACTGGGCGCCGCCACCCTGGCCCACCTGA------------GCTGCTCGCCGGGCAGTAGGCGGCCGAGCAGTCCCAGCCCGCTGGCCGCCGCGGCTCCGGCCACGCCTCCCCCGCCCAGCGCGC----CCCCGCGCCTCCTGCTCCTTCTGGACGC----CCGCCGGGCTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55059136 330 + 59248254 TTCCCT-------Ccccaggc-ccaggcccagccccaacccgtcccgcgcaccccagcGTGGGTCGGATCCAATCCCCGGCAGATCCACAGGCGGTTGCGCCAGCCCCGAGCTCTAACGCGCCTCCGGGGCCG-C-CCCGCACCCACCAGCCTGCAGAGACCCTGCAGCCGTGTAA-CCTCGCCTTGCCACTGGGCGCCGCCACCCCGGCCCACCTGA------------GCTGCTCGCCGGGCAGGAGGCGGCCGAGCAGTCCCAGCCCGCGGGCCGCTGCGGCTCCGGCCACGCCTCCCCCGCGCAGCGCGC----CCCCGCGCCGCCTGCTCCTTCTGGGCGC----CCGCTGGGCCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47161624 330 + 51301725 TTccct-------ccccaggc-ccaggcccagccccaACCCGTCCCGCGCACCCCAGCGTGGGTCGGATCCAATCCCCGGCAGATCCACAGGCGGTTGCGCCAGCCCCGAGCTCTAACGCGCCTCCGGGGCCG-C-CCCGCACCCACCAGCCTGCAGAGACCCTGCAGTCGTGTAA-CCTCGCCTTGCCACTGGGCGCCGCCACCCCGGCCCACCTGA------------GCTGCTCGCCGGGCAGGAGGCGGCCGAGCAGTcccagcccgcgggccgccgcggctccggccacgcctcccccgcccagcgcgc----ccccgcgccgcctgctccttctgggcgc----ccgctgggccg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46866975 330 + 50890351 TTCCCT-------Ccccaggc-ccaggcccagccccaacccgtcccgcgcaccccagcGTGGGTCGGATCCAATCCCCGGCAGATCCACAGGCGGTTGCGCCAGCCCCGAGCTCTAACGCGCCTCCGGGGCCG-C-CCCGCACCCACCAGCCTGCAGAGACCCTGCCGCCGTGTAA-CCTCGCCTTGCCACTGGGCGCCGCCACCCCGGCCCACCTGA------------GCTGCTCGCCGGGCAGGAGGCGGCCGAGCAGTCCCAGCCCGCGGGCCGCTGCGGCTCCGGCCACGCCTCCCACGCCCAGCGCGC----CCCCGCGCCGCCTGCTCCTTCTGGGCGC----CCGCTGGGCCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45449516 324 + 49145316 TCCTTT-------CCCCAGGC-CCAGGCCCAG------CATGTCCCGCGCACGCCAGCGTGGGTCGGATCCCACTCCCGACAGAGCTACAGGAGGTTGCGCCAGCCCCGAACTCCAGCGCGCC-CCGGAGCCG-C-CCCGCACCCGCCAGTCCGTAGCTACCCCGCCACCGCGTGACCCCCGCCTTGCCATTGGGGGCCGCCACCCCGGCCCACCTGA------------GCCGCCCGCCGGGAAGGAGGCGGCCGAGCAGTCCCAGCCCGCGAGCCGCCGCGGCTCCGGCCACGCCTCCCCCGCCCAGTGCGC----CCCCGCGCCGCCTGCTCCTTCGGGGCGC----CCGCCGAGCCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3692550 312 + 145441459 -ACCCTGTACGATCTGCAAGCACCTTTCGTAGCCCAGCCCCGCGCAGCGAAGGCCAGCGTGTATCCGATTC-TGCCTCGGCAGATCCACAGGCGGTTACGCCA---CCCAGCCCGGCCACGCTCTGGGCGCTGTC-CCCGC------------------ACCCCGCCACCCTACGATCTTCGTGACGCCGCCATGCAACCCAACCTGGGCCCACCTGA------------ACCGTCCGTGGGCCAGAAGACTGCGGAGC---TCCTTTTCG-AGGCCGCCTCGGCTCGCGCCACGCCTCCCCAGCTCAGCACGC----CCCCGCACTGCCCG-TTCTGGAGGGCGC----CGGCAGGGCTG i mm10.chr7 C 0 C 0 s canFam3.chr1 19650407 299 - 122678785 ----------------------------CCAGCGCC--CCAGTTCC-----CCCCGGCGCAAGTCAGA----CCTCCCGGCAGAGCCACAGGCGGTTAcgcca-ccccgcgctccgccgcgctctcggcgcca-cacccgcccgggccggcccgccgg---tccgcaagcgc-----ccccgcctcgcccccgaggcgccccgctccggcccacctgggcccggctccgcgctgcccGCCGGGCAGAAGGCGGCGGAGCAGTCCCGGCCCACCGG-CGCCCCGGATCCGGCCACGCCTCCCTcgcccggcgcgcgcggtcccgggccg------------gtgcgcggcTCCGTCAGGCTG i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60033564 287 + 64156825 M a score=1680104.000000 s hg38.chr19_GL949747v2_alt 164429 511 + 729520 CGCAGATCAGGCCGGGGAAGAAGCCACGGTCAGGGCCCCGGGCGGGCAGGGAAGAAGCCCCGGAGCAGAAGCCGA-GAGCGCGAGTCGGCAACGGGATTCGAGTCCAGGTCC----------ACACTGGGATCCGAGCTCCGAGTACGTGAAGGGGCGGGCCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTTGGACCCGAAGGGGAACAGACGGGCTCCGGAAAGGAGGCGGGGTCTGGAGCTCGCCGTGAGGAATGAGGCGGGGTCTCCC-TTCGGGTTCCTTCGGGCACAATCGGGAGCTTGAgtt-ctccggaagcggggccacaaacttcggctcacttcggcaatagtcga--------------gaacgga---------------gagctgaggccagtgtgggcggagccacatgtttcggctttcttcggaggtagtCGAGTCCTTAGGGTCACTGTTCCGATGTGGGCGGGGCCACAGACT-CGGCCGGATGTGGGTGGGGCCACAAGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA s panTro4.chr19 59097123 512 + 63644993 CGCAGATCAGGCCGGGGAAGAAGCCACGGTCAGGGCCCCGGGCGGGCAGGGAAGAAGCCCCGGAGCAGAAGCCGA-GAGCGCGAGTCGGCAACGGGATTCGAGTCCAGGTCC----------ACACTGGGATCCGAGCTCCGAGTACGTGAAGGGGCGGGCCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTTGGACCCGAAGGGGAACAGACGGGCTCCGGAAAGGAGGCGGGGTTTGGAGCTCGGCGTGAGGAATGAGGCGGGGTCTCCC-TTCGGGTTCCTTCGGGAACAATCGGGAGCTTGAGTTTCCCCGGAGGCGGGGCCACAAACTTCGGCTCACTTCGGCAATAGTCGA--------------GAACGGA---------------GAGCTGAGGCCACTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCGAGTCCTTAGGGTCACTGTTCCGATGTGGGCGGGGCCACAGACT-CGGCCGGATGTGGGTGGGGCCACAAGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55974580 511 + 60714840 CGCGGATCAGGCCGGCGAAGAGGCCACGGTCAGGGCCCCGGGCGGGCAGGGAAGAAGCCCCGGAGCAGGAGCCAA-GAGCGCGAGTCGGCAACGGGACTCGAGTCCAGGTCC----------ACACTGGGATCCGAGCTCCGAGTACGTGAAGGGGCAGGCCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTCGGACCCGAAGGGGAACAGACGGGATCCGGAAAGGAGGCGGGGTTTGGAGCTCGGCGGGAGGAATGAGGCGGAGTCTCCC-TTCGGGTTCCTTCTGGCACAATCGAGAGCTTGAATT-CACTGGAGGCGGGGCCACAAACTTCGGCTCACTTCGGAGATAGTCGA--------------GAACGGA---------------GAGCTGGGGCCAGTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCTAGTCCTTAGGGTCACTGTTCCGATGTGGGCGGGGCCACAGACT-CGGCCGGATGTGGGTGGGGCCACAAGCTTCGGTTTACTTCGTAGACAGTTGGGTACAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102744117 511 - 106955855 CGCGGATCAGGCCCGGGAAGAGGTCACGGTCAGGGTCCCGGGCGGGCAGGGAAGGAGCCCCGGAGCAGGCGCCGA-GAGCGCGAATCGGCAACGGGACTTGAGTCCAGGTCC----------ACACTGTGATCCGAGCTCCGAGTACGTGAAGGGGCGGGCCTTCGGGCTCGGAACAGGGAGGAGCCAAAAGCTTTGGACCCGAAGGGGAACAGACGGGATCCGGAAAGGAGGCGGGGTCTGGAGCTCGGCGTGAGGAATGAGGCGGGGTCTCCT-TTCGGGTTCCTTCGGGCACAATCGGGAGCTTGAGTT-CACTGGAGGCGGGGCCACAAACTTCGGCTCACTTCGGAGATAGTCGA--------------GAACGGA---------------AAGCTGGGGCCAGTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCGAGTCCTTAGGGTCACTGTTCCGATGTGGGCGGGGCCACAGACT-CGGCCGGATGTCGGTGGGGCCACAAGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60033851 511 + 64156825 CGCGGATCAGGGCGGGGATGAGGCCACGGTCAGGGTCCCGGGCGGGCAGGGAAGGAGCCCCAGAGCAGGCGACCG-GAGCGCGAGTCGACAACGGGACTCGAGTCCAGGTCC----------ACACCGGGCTCCGAGCCCCGAGAACGTGAAGGGGCAGGGCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTTGGACCCGAAGGGAGACAGACAGGATCCGGAAAGGAGGCGGGGTCTGGAGCTCGGCGTGAGGGATGAGGCGCGGTCTCCG-TTCGGGTTCCTTCGGGCACAATCGGGAGCTTGAGTT-CACGGGAGGCGGGGCCACAAACTTCGGCTCACTTCGGAGATAGTCGA--------------GAACGGA---------------GCGCTGGGGCTACTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCGAGTCCTTAGTGTCACTGTTCCGATGTGGGCGGGACCACAGACT-CGGCCGGATGTGGGTGGGGCCATATGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA i rheMac3.chr19 M 287 C 0 s macFas5.chr19 55059466 511 + 59248254 CGCGGATCGGGGCGGGGATGAGGCCACGGTCAGGGTCCCGGGCGGGCAGGGAAGGAGCCCCAGAGCAGGCGACTG-GAGCGCGAGTCGACAACGGGACTCGAGTCCAGGTCC----------ACACCGGGCTCCGAGCCCCGAGAACGTGAAGGGGCAGGGCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTTGGACCCGAAGGGAGACAGACGGGATCCGGAAAGGAGGCGGGGTCTGGAGCTCGGCGTGAGGGATGAGGCGCGGTCTCCG-TTCGGGTTCCTTCGGGCACAATCGGGAGCTTGAGTT-CACGGGAGGCGGGGCCACAAACTTCGGCTCACTTCGGAGATAGTCGA--------------GAACGGA---------------GCGCTGGGGCTACTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCGAGTCCTTAGTGTCACTGTTCCGATGTGGGCGGGACCACAGACT-CGGCCGGATGTGGGTGGGGCCATATGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47161954 511 + 51301725 cgcgGATCGGGGCGGGGATGAGGCCACGGTCAGGGTCCCGGGCGGGCAGGGAAGGAGCCCCAGAGCAGGCGACCG-GAGCGCGAGTCGACAACGGGACTCGAGTCCAGGTCC----------ACACCGGGCTCCGAGCCCAGAGAACGTGAAGGGGCGGGGCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTTGGACCCGAAGGGAGACAGACGGGATCCGGAAAGGAGGCGGGGTCTGGAGCTCGGCGTGAGGGATGAGGATCGGTCTCCG-TTCGGGTTCCTTCGGGCACAATCGGGAGCTTGAGTT-CACGGGAGGCGGGGCCACAAACTTCGGCTCACTTCGGAGATAGTCGA--------------GAACGGA---------------GCGCTGGAGCTACTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCGAGTCCTTAGTGTCACTGTTCCGATGTGGGCGGGACCACAGACT-CGGccggatgtgggtggggccataAGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46867305 511 + 50890351 CGCGGATCGGGGCGGGGATGAGGCCACGGTCAGGGTCCCGGGCGGGCAGGGAAGGAACCCCAGAACAGGCGACCG-GAGCGCGAGTCGACAACGGGACTCGAGTCCAGGTCC----------ACACCGGGCTCCGAGCCCCGAGTACGTGAAGGGGCGGGGCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTTGGACCCGAAGGGAAACAGACGGGATCCGGAAAGGAGGCGGGGTCTGGAGCTCGGCGTGAGGGATGAGGTGCGGTCTCCG-TTCGGGTTCCTTCGGGCACAATCGGGAGCTTGAGTT-CACGGGAGGCGGGGCCAGAAACTTCGGCTCACTTCGGAGATAGTCGA--------------GAACGGA---------------GCGCTGGGGCTACTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCGAGTCCTTAGTGTCACTGTTCCGATGTGGGCGGGAACACAGACT-CGGCCGGATGTGGGTGGGGCCATAAGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45449840 506 + 49145316 CGCGGATCGGGCCGGGGATGAGGCCACGGTCAGGGCCCCGGGCGGGCAGGGAAGAAGCCCGGGAGCGGGCGCCAG-GAGCGCGAGCCAGCAGCGGCACTCGAGTCCAGGTCT----------GCAATGGGCTCCGAGTTCCGAGTACGTGAAGGGGCGGGGCCTCGGGCTCGGAACAAGGAGGAGCCAAAAGCCTTGGGCCCGGGGAGGATAAGACAGGATCCGGAAAAGAGGCGGGGTCTGGAGCCTAGCGTGAGAGATGAGGCGGGGTCTCCG-TTCGGGTTCCTTCGGGCACAGTCGGGAGCTTGAGTT-CACTGGAGGTGGGGCCACAAACTTCCGCTCACTTCGGAGATAGTCGA--------------GAACCGA---------------GTGCTGGGGCCGGCGTGGGCGGGGCCACACGTTTCGGCTTTCTTCGGAGATAGTCGAGTC---AGGGTCGCTGTTCTGATGTGGGCGGGACCAC--ACT-CGGCCGGATGTGGGTGGGGCTACAAGTTTCGGTTTACTTCGTAGATAGTTGGGTATAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3692862 508 + 145441459 CGCGGTCCAGGCCCCGAGAGCCGCGGCTGTACGAGTTACAGCACCGCAAGAAAGGTACCC--------------A-GAACACCAGTCTGCCGCAAGATGCCTGTCGCGATCTTTCTAGGAGGTCCCCGGGCAAAGAGCTGCCAGTACGTGAAGGGGCGGGGTTTCGGG-TCAGA--GAGGCGGGGCCAAGATCTTCGAGTCC----------CGTTGAGACTTG---AGGAGGAGGGACCTGGAGCTCA-----------GAGACAGACTTTCAGCTTCGGATTCCTTCGGGCACACTCGGTCATTCAAGCC-CTCGGCATGGAGTGCCAC-AGCTTCGGCTTACTTCGGGGATAGCCGAATTCCAAAGTCACGGCTCGGAATTAGATGCGTTTACAAACTCGGCCGGATGTAGGCGGGACCACACACTTCGGCTTGATTCGGAAATAATCGGGTCCA-AAAGTCGTTGTGTAGTGTTAGGCGGGCTCAAGAACG-CAGAACGAAGTAGGCGGGACCGCATGCTTCGGCTTACTTCGGAGATAGTCGGAATCAG i mm10.chr7 C 0 I 244 s canFam3.chr1 19650706 293 - 122678785 -------------------------------------CGGGCCAGGCAGGGAAG-CGTCCTGCTCCGCGCGCCCGCGAGCACCCCTCGGCCGCTGCA-------CCTGGACC----------TCAC-GGCAGCCGAGCCCAGAGCACGTAAAGAGGCGAGGCCTCGG---------------------------------------------------------------------------------------AGGAAGGAGGCGGGGCCTCCGCTTCGGGTTCCCTCGGGCAGAATCGGCGGC---AGCT----TGGAGGCGGGGCCACAGGCTTCGGTGTACTTCG---------GA--------------------A---------------------------------------------------------------------------------GTCTCTGTTCGGATGTAGGCGGGGCCAAGAGCTGCGGGCGGACGTAGGCGGGGTCATA-GCGTCGGTTTTTTCCGGAGATGGTTGGGTACCA i canFam3.chr1 C 0 C 0 a score=608434.000000 s hg38.chr19_GL949747v2_alt 164940 200 + 729520 GTGACGC----TAGGATGATAGGCGGAGTCAACAGGTTCGCCAGATACCCATGAGTATTTACA------------AGGGGGCGGGGCGA--AAGCGACTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCGGCGTGCGCCTACGGGACCGGGCCAGGGTGACGATCCTCAAGTTCCCAAGTAGAGGAGAGGAAGCGGCAGAGGGAGGTGCGCTCAGTGG s panTro4.chr19 59097635 200 + 63644993 GTGTCGC----TAGGGTGATAGGCGGAGTCAACAGGTTCGCCAGATACCGATGAGTATTTACA------------AGGGGGCGGGGCGA--AAGCGACTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCTGCGTGAGCCTACGGGACCGGGCCAGGGTGAAGATCCTCAAGTTCCCAAGTAGAGGAGAGGAAGCGGCAGAGGGAGGTGCGCTCAGTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55975091 200 + 60714840 GTGACGC----TAGGATGATAGACGGAGTCAACAGGATCGCCAGATACCGATGAGTATTTACA------------AGGGGGCGGGGCGG--AAGCGACTTGCCCTCAAAGGGGGGGAACCCCGAGGGCCGGCGTGTGCCTACGGGATCGGGCCAGGGTGACGATCCTCAAGTTCCCAAGTTGAAGAGAGGAAGCGGCAGAGGGAGGTGCGCTCAGTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102744628 200 - 106955855 GCGACGC----TGGGGTGATAGGCGGAGTCAACAGGTTCGCCAGAGACCGATGAGTATTTACA------------AGGGGGCGGGGCGA--AAGCGACTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCGGCGTGCGTCTACGGGACCCGGCCAGGGTGAGGATCCTTAGGTTCCCAAGTTGAGGAGAGGAAGCGGCAGAGAGAGGTGCGCTTAGTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60034362 200 + 64156825 GGGACGC----TAGGATGATAGGCGGAGTCAACAGGTTCGCGAGATGCTGATAAGGATTTACA------------AGGGGGCGGGGCGA--AAGCGGCTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCGGCGTGCGCCTAGGGCACGGGGCCAGGGTGACGAGCCTCAAGTTCCCAAGCTGAGGAGAGGAAGCGGCAGAGGGAGGTGCGCTCGGTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55059977 200 + 59248254 GGGACGC----TAGGATGATAGGCGGAGTCAACAGGTTCGCGAGATGCTGATAAGGATTTACA------------AGGGGGCGGGGCGA--AAGCGGCTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCGGCGTGCGCCTAGGGCACGGGGCCAGGGTGACGAGCCTCAAGTTCCCAAGCTGAGGAGAGGAAGCGGCAGAGGGAGGTGCGCTCGGTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47162465 200 + 51301725 GGGACGC----TAGGATGATAGGCGGAGTCAACAGGTTCGCCAGATACCGATGAGGATTTACA------------AGGGGGCGGGGCGA--AAGCGGCTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCGGCGTGCGCCTAGGGGACGGGGCCAGGGTGACGAGCCTCAAGTTCCCAAGCTGAGGAGAGGAAGCGGCAGAGGGAGGTGCGCTCGGTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46867816 200 + 50890351 GGGACGC----TAGGATGATAGGCGGAGTCAACAGGTTCGCCAGATACCGATGAGGATTTACA------------AGGGGGCGGGGCGA--AAGCGGCTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCGGCGTGCGCCTAGGGGACGGGGCCAGGGTGACGAGCCTCAAGTTCCCAAGCTGAGGAGAGGAAGCGGCAGAGGGAGGTGCGCTCGGTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45450346 189 + 49145316 GTGACGC----TAGGATGATAGGCGGAGTCAACAGGTTCGGCAGATACGGAAGAATATTTACA------------AAGTGGAGGGGCGA--AAGCGACTTGCCCTCAAAGGGGCGGAACCCCGGAGATCGGCGTGCGCGTAGGGGGCGGGGTCAGGGAGACGATCCTCAAATTCCGGAGT-----------AGCGGCAGAGGGAGGTGCGCTCGATGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19650999 206 - 122678785 GTGGCTCAGATTAGGA-GATAGGCGGAGTCTGTTTTTTCCTGAG-----GAGGCGGGGCCACAGACAGGGCTCGGAGGGGGCGGGGCCAACAGGAGCCCAGCCC---GAGGGGCGG-CCCCCGTTGACC--CGTCAGCCGCGGGGGCGGGGCCAGGGTAATTAGCCTCCCACACGCGAGAGGCAGAACCGTAGAGGCGGAGGGAGGTTCGCTTCGCGG i canFam3.chr1 C 0 C 0 e mm10.chr7 3693370 244 + 145441459 I a score=1685709.000000 s hg38.chr19_GL949747v2_alt 165140 496 + 729520 -GGCGGAGCCAAGG---TGGCCCCCGCGG--------GAGGAGGGCGGGGCTTCGGTCCTGCGAGGGGCGGGACCTGAC-TTCCCGCGGCGCTGATGGGGCGGGATGACGAAGTTGACG-A-GGGTGTCGGCATGAGG------GGGTGGAGCAAGGAGCGCGTG--GCGCGGTGCGCAGTGGGTGGCTCCACCTCGACTGCGAATTACTGTT---TATGAGGTGACTCGCTGGTTCTATCGGTGGACAGTGGGACATTCTGAAGGGAGGCAAGGAGGCGGACTGAGCGCTCCCAATTGGGGTGAGCCCGCCCGAGCGGAGAGTGGACGGCGGGTGTCCAGGGGGCGGGGCTTTCGGCTGTGGGGTTCGGTCG-TAGGGCGGGAACTCCCCAACTGGGGTGCGCTGGCGCTCGGAGGGGGCGGGGCCACAGGCCGCGAGGCTGCCGG-GAGCCGATGACGCCCGAACGCCGAACCTATTGCGTCCGGGAGGAGGCGGGGCTACGGATTCGGCCGAGCCGAGAAC s panTro4.chr19 59097835 496 + 63644993 -GGCGGAGCCAAGG---TGGCCCCCGCGG--------GAGGAGGGCGGGGCTTCGGTCCTGCGAGGGGCGGGACCTGAC-TTCCCGCGGCGCTGATGGGGCGGGATGACGAAGTTGACG-A-GGGTGTCGGCATGAGG------GGGTGGAGCAAGGAGCGCGTG--GCGCGGTGCGTAGTGGGTGGCTCCACCTCGACTGCGAATTACTGTT---TATGAGGTGACTTGCTGGTTCTATCGGTGGACAGTGGGACATTCTGAAGGGAGGCAAGGAGGCGGACTGAGCGCTCCCAATTGGGGTGAGCCCGCCCGAGCGGAGAGTGGACGGCGGGTGCCCAGGGGGCGGGGCTTTCGGCTGTGGGGTTCGGTCG-TAGGGCGGGAACTCCCCAACTGGGGTGCGCTGGCGCTCGAAGGGGGCGGGGCCACAGGCTGCGAGGCTGCCGG-GAGCCGATGACGCCCGAACGCCGAACCTATGGCGTCCGGGAGGAGGCGGGGCTGCGGATTCGGCCGAGCCGAGAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55975291 497 + 60714840 -GGCGGGGCCAAGG---TGGCCCCCGCGG--------GAGGAGGGCGGGGCTTCGGTCCTGCGAGGGGCGGGACCTGAC-TTCCCGCGGCGCTGATGGGGCGGGATGACGAAGTTGACG-A-GGGTGTCAGCATGAGG------GGGTGGAGGAAGGAGCGCGTG--GCGCGGTGCGTAGTGGGTGGCTCCGCCTCGACTGCGAATTACTGTT---TATGAGGTGACTCGCTGGTTGTATCGGTGGACAGTGGGACTTTCTGTATGGAGGCAAGGAGGCGGACTGACCGCTCTCAATTGGGGTGAGCCCGCCCGATCTGATAGTGGACCGCGGGTGCCTAGGGGGCGGGGCTTTCGGCTGTGGGGTTCGGTCG-TCGGGCGGGAACTCCCCAACTGGGGTGCGCTGGCGCTCGGAGGGGGCGGGGCCACAGGCTGCGAGACTGCTGGTGAGCCGATGACGCCCGAACGCCGAACCTATTGCGTCCGGGAGGAGGCGGGGCTACGGACTCGGCCGAGCCGAGAAC i ponAbe2.chr19 C 0 M 678 s nomLeu3.chr10 102744828 492 - 106955855 -GGCGGGGCCAAGG---TGGCCCCCGCG-----------GGAGGGCGGGGCTTCGGTCCTGCGAGGGGCGGGACCTGAC-TTCCCGCGTCGCTGATGGGGCTGGATGACGAAGTTGACG-A-GGGTGTCGGCATGAGG------GGGTGGAGGAAGGAGCGCGTG--GTGCGGTGCATAGTGGGTGGCTCCGCCTCGACTGCGAATTACTGTT---TATGAGGTGACTCGCTGGTTCTATCGGTGGACAGTGGGACATTCTGAAGGAAGGCAAGGAGGCGGACTGAGCGCTCCCAATTGGGGTGAGCCCGCCGGGGCGGAGAGTGGACGGCGGGTGCCCAGGGGGTGGGGCTTTC-GCTGTGGGGTTCAGTCG-TCGGGCGGGAACTCCCCAACTGGGGTGCGCTGGCGCTCAGAGGGGGCGGGGCAACAGGCTGCGAGACTGCTGG-GAGCCGATGACGCCCGAACGCCGAACCTAGTGCGTCCGGGAGGAGGCGGGGCTACGGATTCGGCCGAGCCGAGAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60034562 496 + 64156825 -GGCGGGGCCAAGG---TGGTCACCGCGG--------GAGGAGGGCGGGGCTTCGAGCCTGCGAGGGGCGGGTCCTGAC-TCCCCCCGGCGCTGACGGGGCGGGATGACGAAGTTGACG-A-GAGGGTCGGCAAGAGC------GGGTGGAGGAAGGAGCGCGTG--GCGCGGTGCGTAGTGGGTGGCTCCGCCTCGACTGCGAGTTAGTGTT---TATGAGGTGACTCGCTGGTTCTGTCGGTGGACCGTGGGACATTCTGAAGGGAAGCAAGGAGGCGGACTGAGCGCTCCCAAGTGGGGTGAGCCCGCCCGAGCGGAGAGCGGACGGCGGGTGCCCAGGGGGCGGGGCTTTCGGCTATGGGGTTCGGTCG-TCGGGCGGGAACTCCCCATCGGGGGTGCGCTGGCGCTCGGAGGGGGCGGGGCCACAGCCTGCGGGACTGCCGG-GAGCCGATGACGCCCGAACGCCGAACCTCAGGCGTCCGGCAGGAGGCGGGGCTACGGATTCGGCCGAGCCGAGAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55060177 496 + 59248254 -GGCGGGGCCAAGG---TGGTCACCGCGG--------GAGGAGGGCGGGGCTTCGAGCCTGCGAGGGGCGGGTCCTGAC-TCCCCCCGGCGCTGACGGGGCGGGATGACGAAGTTGACG-A-GAGGGTCGGCAAGAGC------GGGTGGAGGAAGGAGCGCGTG--GCGCGGTGCGTAGTGGGTGGCTCCGCCTCGACTGCGAGTTAGTGTT---TATGAGGTGACTCGCTGGTTCTGTCGGTGGACCGTGGGACATTCTGAAGGGAAGCAAGGAGGCGGACTGAGCGCTCCCAAGTGGGGTGAGCCCGCCCGAGCGGAGAGCGGACGGCGGGTGCCCAGGGGGCGGGGCTTTCGGCTATGGGGTTCGGTCG-TCGGGCGGGAACTCCCCATCGGGGGTGCGCTGGCGCTCGGAGGGGGCGGGGCCACAGCCTGCGGGACTGCCGG-GAGCCGATGACGCCCGAACGCCGAACCTCAGGCGTCCGGCAGGAGGCGGGGCTACGGATTCGGCCGAGCCGAGAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47162665 496 + 51301725 -GGCGGGGCCAAGG---TGGTCACCGCGG--------GAGGAGGGCGGGGCTTCGAGCCCGCGAGGGGCGGGTCCTGAC-TCCCCCCGGCGCTGACGGGGCGGGATGACGAAGTTGACG-A-GAGGGTAGGCAAGAGC------GGGTGGAGGAAGGAGCGCGTG--GCGCGGTGCGTAGTGGGTGGCTCCGCCTCGACTGCGAGTTAGTGTT---TATGAGGTGACTCGCTGGTTCTGTCGGTGGACCGTGGGACATTCTGAAGGGAAGCAAGGAGGCGGACTGAGCGCTCCCAAGTGGGGTGAGCCCGCCCGAGCGGAGAGTGGACGGCGGGTGCCCAGGGGGCGGGGCTTTCGGCTATGGGGTTCGGTCG-TCAGGCGGGAACTCCCCATCGGGGGTGCGCTGGCGCTCGGAGGGGGCGGGGCCACAGCCTGCGGGGCTGCCGG-GAGCCGATGACGCCCGAACGCCGAACCTCAGGCGTCCGGCAGGAGGCGGGGCTACGGATTCGGCCGAGCCGAGAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46868016 496 + 50890351 -GGCGGGGCCAAGG---TGGTCACCGCGG--------GGGGAGGGCGGGGCTTCGAGCCTGCGAGGGGCGGGTCCTGAC-TTCCCCCGGCGCTGACGGGGCGGGGTGACGAAGTTGACG-C-GAGGGTCGGCCAGAGC------GGGTGGAGGAAGGAGCGCGTG--GCGCGGTGCGTAGTGGGTGGCTCCGCCTCGACTGCGAGTTAGTGTT---TATGAGGTGACTCGCTGGTTCTGTCGGTGGACCGTGGGACATTGTGAAGGGAAGCAAGGAGGCGGACTGAGCGCTCCCAAGTGGGGTGAGCCCGCCCGAGCGGAGAGTGGACGGCGGGTGCCCAAGGGGCGGGGCTTTCGGCTATGGGGTTCGGTCG-TCGGGCGGGAACTCCCCGTCGGGGGTGCGCTGGCGCTCGGAGGGGGCGGGGCCACAGCCTGCGGGACTGCTGG-GAGCCGATGACGCCCGAACGCCGAACCTCAGGCGTCCGGGAGGAGGCGGGGCTACGGATTCGGCCGAGCCGAGAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45450535 505 + 49145316 -GGGGGTGCCAAGG---TGGCCACCGCGG--------GAAGAAGGCGGGGCTCCAGGCCTGTGAGGGGAGGGTCCTGAC-TTCCCGCGGCGCCGAGGCGGCGGAATGACGAAATTGACG-CTGGGGGTCGACATGGGGAGGGGAGGGTGGAGGAAGCAGAGCGTGGCGCGCGGTGCGTAGTGGGTGGCTCCGCCTTGACTGCGAGTTGGTGGTA--TCTGAGGTGACTCGGTGATTCTATCCGTGGACCGTGGGACATTCTGAAGGGAAGCAAGGAAGCGGACTGAGCGCTCCTAAGTGGGGTGAGCCTGCCCGAGCGGAGAGTGGATGGCGGGTGGCCAGGGGGCGGGGCTTTCGGCTACGGGGTTCGGTCG-TGGGGCGGGAACTCCCCAACTGGGGTGCGCTGGCTCTTGGAGTGGGAGGGGCCACAGGCTGCGGGACTGCCAG-AAGCCGATGACG-CAGAACGCCGAACCTTGTGCGTCCGGGAGTGGGCGGGGCTACGTAGTCGGCCGAGCCGAGAAC i calJac3.chr22 C 0 C 0 s mm10.chr7 3693614 384 + 145441459 -GGCGAGGCCAGAGCAATGACCCTCAAGGTCCCATTTGTGCAGACCGGAGT-----GGCAGTGAGGGCT--TTCTTGGCTTTTCCGCTTTGCTGACCTGACGGGATGACG--------G-A-----------------------GG---------------------ACGCGCTACGTAG-GGCCAGCTCCGCCTTAGCCGAGAGTTGGTGTTGGCTAGGGGTTGACTTATTGCCTCTGCCTGAGGACAGTACGACAGATTGAAAGGGAGCCACGACGCACACTGCAC----------------------CTCGAGTG------------------------------------CGACTGT-GGATTCAATCG-T-AATTGTGAACTCCTTAAATTGGGTAGG----------AAGTGGGCGGGGCCACAG-CTGGAAGAACGATGG-GATCTGGCTAGGGTCGAATGCTGAACCTTTTGCAACTTAGAGGGGGTGG-----CTGATTCTACTGAGCCGAGATC i mm10.chr7 I 244 I 32 s canFam3.chr1 19651205 467 - 122678785 GGGCGGGGCCAGGT---TGTTCCCCTTCG--------CGGGAAGGCGGGGCTACGGTGCCGCTGGGGCGGATCCCAGAC-TTCCCGCTCGGCTGAGGTGGCGGCGTGACGAGATTGACGCA-GGGGGTCGGGATGGGGAG----GGGTGGAGGAAGCTGCGCGTG--GCGCGCTACGTAGGGGGCGGCTCCGCCGGGGCTGCGAGCGGGTGTT---TACGAGGCGACTAACTCGTTCTATCGGAGGACGGTACCGCATTCTGAGGGGAA------------------CGCTCACGAG-GAGGTGAGCCCGCCCGGGCAGCGAACGGACGGCGGGTGCCCCGGGGGAGGGACCTCCGGCTGC-GGGTTCGCTCACTAGGGCGGGGACTCTCCCGCCGGGA-GCGCCTGCGGCCGGAGCGGGCGGGGC--CCGGCTGCTGGTC-GACGG-GAGCCGAGGGAGCCCGAACGCCG--------GCCTTCGGGAGGGGGCGGGGCTGCGAGTTCGGCCGACCCGGGA-- i canFam3.chr1 C 0 C 0 a score=509117.000000 s hg38.chr19_GL949747v2_alt 165636 210 + 729520 ACCCGAACGTCAAATTGCTGGCGTTCGGGAAGGGGGCGGGGCTGCGGATTCGGTGGAGCCGAGGACGCCCGAACGCCGAACTTCCTGTGCTCGGGAGGGGGCAGGGTTTTGTACTGTGGGAGTCTGAGAGCGAGGAGGTCCGAAAGCCGAATCACAGTCGTTCGGAAAGAGGAGGAGCGAAGGCTCGAGCGTCCGGAAGAGGGTGTGGCC s panTro4.chr19 59098331 210 + 63644993 ACCCGAACGTCAAATTGCTGGCGTTCGAAAAGGGGGCGGGGCTGCGGATTCGGTGGAGCCGAGGACGCCCGAATGCCGAACTTCCTGTGCTCGGGAGGGGGCAGGGTTTTGTACTGTGGGAGTCTGAGAGCGAGGAGGTCCGAAAGCCGAATCACAGTCGTTCGGAAAGAGGAGGAGCGAAGGCCCGAGCGTCCGGAAGAGGGTGTGGCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102745320 210 - 106955855 TCCCGAATGTCAAATTGCTCACGTTCGAGAAGGGGGCGGGGCTGCGGATTCGGTGAAGCCGAGGACGCCCGAACGCCGAACTTCCTGTGCTCGGGAGGGGGCAGGGTTTTGTACTGTGGGAGTCTGAGAGCGAGTAGGCCCGAAAGCCGAATCACAGTCGTTCGGAAAGAGGAGGACCGAAGGCCCGAGCGTCCCGAAGAGGGTGTGGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60035058 210 + 64156825 ACCCGAACGCCAAATTGCTCGCGTTCGAGAAGGGGGCGGGGCTGCGGATTCGGTGAAGCCAAGGACGCCCGACCGCCGCAATTCTTGTGCTCTGAAGGGGGCAGGGTTTTGTACTGTTGGAGTCTGAGCGCTTGTAGACCCGAAAGCCGAATCACAGTGGTTCGGAAAGAGGAGGAGCCAAGGCCGGAGCGTCCCGAAGTGGGTGTGGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55060673 210 + 59248254 ACCCGAACGCCAAATTGCTCGCGTTCGAGAAGGGGGCGGGGCTGCGGATTCGGTGAAGCCAAGGACGCCCGACCGCCGCAATTCTTGTGCTCTGAAGGGGGCAGGGTTTTGTACTGTTGGAGTCTGAGCGCTTGTAGACCCGAAAGCCGAATCACAGTGGTTCGGAAAGAGGAGGAGCCAAGGCCGGAGCGTCCCGAAGTGGGTGTGGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47163161 209 + 51301725 ACCCGAACGCCAAATTGCTCGCGTTCGAGAAGGGGGCGGGGCTGCGGATTCGGTGAAGCCAAGGACGCCCGATCGCCGCACTTCTTGTTCGA-GAAGGGGGCAGGGTTTTGTGCTGTGGGAGTCTGAGAGCTTGTAGGCCCGAAAGCCGAATCACAGTGGTTCGGAAAGAGGAGGAGCCAAGGCCGGAGCGTCCCGAAGTGGGTGTGGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46868512 210 + 50890351 ACCCGAACGCCAAATTGCTCGCGTTCGAGAAGGGAGCGGGGCTGCGGATTCGGTGAAGCCAAGGACGCCCGACCGCCGCACTTCTTGTGCTCGGAAGGGGGCAGGGTTTTGTACTGTGGGGGTCTGAGAGCTTGTAGGCCGGAAAGCAGAATCACAGTGGTTCGGAAAGAGGAGGAGCCAAGGCCGGAGCGTCCCGAAGTGGGTGTGGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45451040 210 + 49145316 ACCCGAACGCCAAATGGCTCACGTTCGAGAAGGGGGCGGGGCGGTGTATTCGGTGGAGTCGAGGACTCCCGAACGCCGAACCTCCCGCTCCAAGGAGGGAGCAGGGTTTCGTACTGTGGGAGTCTGAGAGCGAGTAGGCCCGACAGCCGAATCACAGTGGTTCGGAAACAGGAGGAGCTAAGGCCGGAGCGTCCCGAAGAGGGTGTGGCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3694030 200 + 145441459 TTCCGAAGGCTGAAACGCTTGCGTTCGGGTAG---GCAGGACTCCCGATTGAGCCGAATTTAGGATGCTGGAACATCGAACAGCTGGCGC--AAGACAGGACTGGGTTT----CTTTTAAAGTCCGACTCAGAATAGGCGGGAAAGGCGAATCTGGGCACTTC-GAAAGGGGAGGGGCTGGGCTCCAAGTATTTAGAAGAGGGTGTGGCT i mm10.chr7 I 32 C 0 s canFam3.chr1 19651672 115 - 122678785 --------------------------------GGGGCGGGGCT------------------------------------------TGTGCT---------GTGGGGTCCCACCCCGCGAGAG------------GAGGGCCTGAGGCCGCGCCTCGTCGGTTCGGAAAGGGGAGGGGCCGAGTTCCGAGGCGCTGGAAGGGGGCGTGGCC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55975788 678 + 60714840 M a score=262305.000000 s hg38.chr19_GL949747v2_alt 165846 113 + 729520 TCGGCGG--TGCCTTAGCCTCCAGAGCTTCTGACCGCTGACGGGAACACCCGAAGGGGGACGCCCACTTTGC-AAGAGGGTGGTGCCAAAATGGACCTTTGTAAGGGGGCGTGTCG s panTro4.chr19 59098541 113 + 63644993 TCGGCGG--TGCCTTAGCCTCCAGAGCTTCTGACCGCTGACGGGAACACCCGAAGGGTGACGCCCACTTTGC-AAGAGGGTGGTGCCAAAATGGTCCTTTGTAAGGGGGCGTGTCG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102745530 113 - 106955855 TCGGCGG--TGCCTTAGCCTCGAGAGCTTCTGACCCCTGACGGGAACACCCGAAGGGGGACGCCCACTTTGC-AAGAGAGTGGTGCCAAAATGCACCTTTGTAAGGGGGCGTGTCG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60035268 113 + 64156825 TTGGCAG--TGCCTTAGCCTCGAGAGCTTCTGACCCCTGAGGGGGGCACCCGAAGGGGGACGCCCACTTTGC-AAGAGGGTGGTGCCAAAATGGACCTTTGTAAGGGGGCGTGTCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55060883 113 + 59248254 TTGGCAG--TGCCTTAGCCTCGAGAGCTTCTGACCCCTGAGGGGGGCACCCGAAGGGGGACGCCCACTTTGC-AAGAGGGTGGTGCCAAAATGGACCTTTGTAAGGGGGCGTGTCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47163370 113 + 51301725 TTGGCAG--TGCCTTAGCCTCGAGAGCTTCTGACCCCTGATGGAAGCACCCGAAGGGGGACGCCCACTTTGC-AAGAGGGTGGTGCCAAAATGGACCTTTGTAAGGGGGCGTGTCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46868722 113 + 50890351 TTGGCAG--TGCCTTAGCCTCGAGAGCTTCTGACCCCTGATGGAAGCACCCGAAGGGGGACGCCCACTTTGC-AAGAGGGTGGTGCCAAAATGGACTTTTGTAAGGGGGCGTGTCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45451250 99 + 49145316 TCGGCGG--TGCTTTAGCTTCGAGAGCTTTTGATCCCCGACGGGA--------------ACGCCCACTTTGC-AAGAGGGTGGAGCCAAAATGGACCTTTATAAGGGGGTGATTCG i calJac3.chr22 C 0 C 0 s mm10.chr7 3694230 100 + 145441459 TGAGCAAACCACCCTACATT---GAGGTTCTGAGATTTGACGGACGCATAAGAAG----ACACCCACTTTGCAAAAAGGGCGGTGC--------ACCACTATGGCGGGAGGTCTC- i mm10.chr7 C 0 C 0 e canFam3.chr1 19651787 0 - 122678785 C e ponAbe2.chr19 55975788 678 + 60714840 M a score=279580.000000 s hg38.chr19_GL949747v2_alt 165959 140 + 729520 CCGCGCTTGCGGAGGTTTGTTTTTCACGCTCCAAGGCGCAATGGTAGG-TACGGCAGTGCGGGCACAGAGCGGGTGCCGACCGCAGGGTCACAAGGGTAGAGCGGGACCCTGGGGGCTTGGCGAGGGGCGAGGGTCGGGGG s panTro4.chr19 59098654 140 + 63644993 CCGCGCTTGCGGAGGTTTGTTTTTCACACTCCAAGGCGCAATGGTAGG-TACGGCAGTGCGGGCACAGAGCGGGTGCCGACCGCAGGGTCACAAGGGTAGAGCGAGGTCCCGGGGGCTTGGCGAGGGGCGAGGGTCGGGGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102745643 139 - 106955855 CCGCGCTTGCGGAGGTTTGTTTTTCAGACTCCAAGGCGCAATGGTAGG--ACGGCAGTGTGGGCACAGAGCGGGTGCCGACCGCAGGGACACAAGGGTAGAGCGGGGCCCCGGGGACTTGGCAAGGGGCGAGGGCCGGGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60035381 133 + 64156825 CCGCGCTTGGGGAGGTTTGTTTTTGAGACTCCAAGGCGCAATGGTAGG-TACGGCAGTGTGGGCACAAAGCGGGTGCCGACTGCAGGGTCACAAGGGTAGAGCAGGGCCCCGGGGACGCGGCGAGGGGCGAGGG------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55060996 133 + 59248254 CCGCGCTTGGGGAGGTTTGTTTTTGAGACTCCAAGGCGCAATGGTAGG-TACGGCAGTGTGGGCACAAAGCGGGTGCCGACTGCAGGGTCACAAGGGTAGAGCAGGGCCccgggggcgcggcgaggggcgaggg------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47163483 131 + 51301725 CCGCGCTTGGGgaggtttgtttttgagactccAAGGCGCAATGGTAGG-TACGGCAGTGTGGGCACAAAGCGGGTGCCGACTGCAGGGTCACAAGGGTAGAGCAgggccccgggggcgcggcgaggggcgag--------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46868835 140 + 50890351 CCGCGCTTGGGGAGGTTTGTTTTTGAGACTCCAAGGCGCAATGGTAGG-TACGGCAGTGTGGGCACAAAGCGGGTGCCGACTGCAGGGTCACAAGGGTAGAGCAGAGCCCCGGGGGCGCGGCGAGGGGCGAGGGCCGCGGG i chlSab2.chr6 C 0 I 3 s calJac3.chr22 45451349 106 + 49145316 CCGCGCTTGT---GGTTTCTTTTTGAGACTTGAAGGCGCAATAGCAGG-TAGGGCAGTGTGGGCACAGAGCGGGTGCCGACGGCAGGGTCACAAGGGCTGAGCGGGGCTC------------------------------- i calJac3.chr22 C 0 C 0 s mm10.chr7 3694330 97 + 145441459 ---------------------TCTGAGGGGACGAGAGATGGTGGTACGCTTTGGCAGAGAAGATGGTCACCTGGAGCTGA---------------GGGGGAGCGGAACGGTGGGACCTGGGTGAGGGGCGTGG-------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19651787 86 - 122678785 CCGCGCTAGGGGA------------------------GCAGAGGACCG-----------------------GGACGCGGACTGCAGGGTCCGGAGGGCCGAGCTGGGCCCCAACGTCTCGGCGAGAGGCGGGG-------- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55975788 678 + 60714840 M a score=-13340.000000 s hg38.chr19_GL949747v2_alt 166099 17 + 729520 CTTGTCTCCGG-CGTCTC s panTro4.chr19 59098794 3 + 63644993 TTT--------------- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102745782 3 - 106955855 CTC--------------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60035514 10 + 64156825 ----CTGCCGGTCG---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55061129 10 + 59248254 ----ccgccggtcg---- i macFas5.chr19 C 0 C 0 s calJac3.chr22 45451455 1 + 49145316 ------------C----- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19651873 4 - 122678785 ----CCTC---------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3694427 0 + 145441459 C e ponAbe2.chr19 55975788 678 + 60714840 M e chlSab2.chr6 46868975 3 + 50890351 I e papAnu2.chr19 47163614 0 + 51301725 C a score=201140.000000 s hg38.chr19_GL949747v2_alt 166116 84 + 729520 GTCTCCGGCGGCCGCGAGGCCTGGTGGGATC---GCCCGGGGGCGGGGCCTGGCGCT-------CGGGCCC---------------------------------AGCAGGTGGTGAACGGCGGCTGA- s panTro4.chr19 59098797 84 + 63644993 GTCTCCGGCGGCCGCGAGGCCTGGTGGGATC---GCCCGGGGGCGGGGCCTGGCGCT-------CGGGCCC---------------------------------AGCAGGTGGTGAACGGCGGCTGA- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102745785 84 - 106955855 GTCTCCGGCGGCCGCGCGGCCTGGTGGGATC---GCCCGGGGGCGGGGCCTGGCGCT-------CGGGCCC---------------------------------AGCAGGTGGTGATTTGCGACTGA- i nomLeu3.chr10 C 0 M 100 s rheMac3.chr19 60035524 84 + 64156825 GTCTCCGGCGGCCGCGGGGCCTGGCGGGATC---GCCCTGGGGTGGGGCCTGGCGCT-------CCGGCCC---------------------------------AGCAGGTGGTGAACGGCGGCTGA- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55061139 84 + 59248254 gtctccggcggccgcggggcctggcggGATC---GCCCTGGGGTGGGGCCTGGCGCT-------CCGGCCC---------------------------------AGCAGGTGGTGAACGGCGGCTGA- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47163614 75 + 51301725 ---------ggccgcggggcctggcgggatc---gccctggggtggggcctggcgcT-------CCGGCCC---------------------------------AGCAGGTGGTGAACGGCGGCTGA- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46868978 84 + 50890351 GTCTCCAGCGGCCGCGGGGCCTGGCGGGATC---GCCCTGGGGTGGGGCCTGGCGCT-------CCGGCCC---------------------------------AGCAGGTGGTGAACGGCGGCTGA- i chlSab2.chr6 I 3 C 0 s calJac3.chr22 45451456 84 + 49145316 GTCTCCGGCGGCCGCGGAGCCTGGTGGGATC---GTCCGGGGGCGGGGCCTGGCACT-------TGGGCCC---------------------------------AGCAGGTGGTGAACAGCGGCCGA- i calJac3.chr22 C 0 C 0 s mm10.chr7 3694427 59 + 145441459 -TCTTAACTGGTC------CCTGGGTAGATCTTGGCTGGGGGGCGGGG---GGGG--------------------------------------------------GCAGGTGGCAACCC--------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19651877 123 - 122678785 GTCTC-GGCGGCACCGGGGCCTGGTGGCATC---GCCCGAgggcggggtccggggcccagggggcgggcccggcggcagggggcggggccTGGTGTGGAAAATTGGCAGGTGGCGAAC-GCGGCCCCG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55975788 678 + 60714840 M a score=38572.000000 s hg38.chr19_GL949747v2_alt 166200 13 + 729520 GCGAGGCCCCGCC s panTro4.chr19 59098881 13 + 63644993 GCGAGGCCCCGCC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60035608 13 + 64156825 GCGAGGCCCCGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55061223 13 + 59248254 GCGAGGCCCCGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47163689 13 + 51301725 GCGAGGCCCCGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46869062 13 + 50890351 GCGAGGCCCCGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45451540 13 + 49145316 GCGAGGCCCCGCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3694486 10 + 145441459 ---CAGCCCCGCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19652000 13 - 122678785 GCGAGGCTCCACC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55975788 678 + 60714840 M e nomLeu3.chr10 102745869 100 - 106955855 M a score=29580.000000 s hg38.chr19_GL949747v2_alt 166213 13 + 729520 CCCTGAGGCCTAG s panTro4.chr19 59098894 13 + 63644993 CCCTGAGGCCTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55976469 13 + 60714840 CCCTAAGGCCTAG i ponAbe2.chr19 M 678 C 0 s rheMac3.chr19 60035621 13 + 64156825 CCCTGAGGACTAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55061236 13 + 59248254 CCCTGAGGACTAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47163702 13 + 51301725 CCCTGAGACCTAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46869075 13 + 50890351 CCCTGAGAATTAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45451553 13 + 49145316 CTTTGTGGCCTGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3694496 13 + 145441459 CCTTGGGGGGTGA i mm10.chr7 C 0 I 1 s canFam3.chr1 19652013 12 - 122678785 -CCCCAGGCTCAG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102745869 100 - 106955855 M a score=1517394.000000 s hg38.chr19_GL949747v2_alt 166226 369 + 729520 GGGCGGGGCTT--CGCCGAGACCCCGG-AGGCTTTGGGTGCGCT-GCAGCGGT----------------CTGCGGCGCGCA-GCTGTTTCGGTAACTGCTTTGCCTCCC-GGCTCCCGCAGGAGGATGCTGGTGGTGGAGGTGGCGAACGGCCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTCAGCGCCCCGCGTCCAGACTCTCGGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACTC--------------------------------------- s panTro4.chr19 59098907 369 + 63644993 GGGCGGGGCTT--CGCCGAGACCCCGG-AGGCTTTGGGTGCTCT-GCAGCGGT----------------CCGCGGCGCGCA-GCTGTTTCGGTAACTGCTTTGCCTCCC-GGCTCCCGCAGGAGGATGCTGGTGGTGGAGGTGGCGAACGGCCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTCAGCGCCCCGCGTCCAGACTCTCGGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACTC--------------------------------------- i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 55976482 353 + 60714840 GGGCGGGGCTT--CGCCGAGACCCCGG------------------GCGGCGGT----------------CCGCGGCGCGCA-GCTGTTTCGGTAACTGCTTTGCCTCCT-GGCTCCCGCAGGAGGATGCTGGTGGTGGAGGTGGCGAACGGCCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTCAGCGCCCCGCGCCCAGACCCTCGGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGACTTGAACTC--------------------------------------- i ponAbe2.chr19 C 0 I 194 s nomLeu3.chr10 102745973 369 - 106955855 GGGCGGGGCTT--TGCCGAGACCCCGG-AGGCTTTGGGTGCGCT-GCGGCGGT----------------CCCCGGCGCGCA-GCTGTTTCGGTAACTGCTTTGCCTCCC-GGCTCCCGCAGGAGGATGCTGGTGGTGGAGGTGGCGAACGGCCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTCAGCGCCCCGCGCCCAGACCCTCGGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACTC--------------------------------------- i nomLeu3.chr10 M 100 I 194 s rheMac3.chr19 60035634 369 + 64156825 GGGCGGGTCTT--CGCCAAGACCCCGG-AGGCTTTGGTTGTGCT-CCGGTGGC----------------CCGCGGCGCGCA-GCCGTTTCGGTAACTGCTTTGCTTCCC-GGCTCCCGCAGGAGGATGCTAGTGGTGGAGGTGGCGAACGGTCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGGGATCGGCGCCGTGACTCTGGTTAGCGCCCCGCGCCCAGACCCTCAGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACGT--------------------------------------- i rheMac3.chr19 C 0 I 194 s macFas5.chr19 55061249 369 + 59248254 GGGCGGGTCTT--CGCCAAGACCCCGG-AGGCTTTGGTTGTGCT-CCGGTGGC----------------CCGCGGCGCGCA-GCCGTTTCGGTAACTGCTTTGCTTCCC-GGCTCCCGCAGGAGGATGCTAGTGGTGGAGGTGGCGAACGGTCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTTAGCGCCCCGCGCCCAGACCCTCAGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACGT--------------------------------------- i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47163715 369 + 51301725 GGGCGGGTCTT--CGCCAAGACCCCGG-GGGCTTTGCTTGTGCT-CCGGTGGC----------------CCGCGGCGCGCA-GCCGTTTCGGTAACTGCTTTGCTTCCC-GGCTCCCGCAGGAGGATGCTGGTGGTGGAGGTGGCGAACGGTCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTTAGCGCCCCGCGCCCAGACCCTCAGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCggggctcgaactc--------------------------------------- i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 46869088 369 + 50890351 GGGCGGGTCTT--CGCCAAGACCCCGG-AGGCTTTGGTTGTGCT-CCGGTGGC----------------CCGCTGCGCGCA-GCCGTTTCGGTAACTCCTTTGCTTCCC-GGCTCCCGCAGGAGGATGCTAGTGGTGGAGGTGGCGAACGGTCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTTAGCGCCCCGCGCCCAGACCCTCAGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACTC--------------------------------------- i chlSab2.chr6 C 0 I 194 s calJac3.chr22 45451566 366 + 49145316 GGGCGGGGTTT--TGCC-AGATCCC-G-AGGCGCCGAGTGCTCTCCCGGGGGC----------------CCGCG--GCGCA-GCTGTTTCGGTGACCGCTTTGTCTCCC-GGCTCCCGCAGGAGGATGCTGGTTGTGGAGGTGGCGAACGGCCGCTCCCTGGTGTGGGGGGCCGAGGCGGTTCAGGCCCTCCGGGAGCGCCTGGGAGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCACGCTTGGGCCTCCCGCTGCTGTTGATGCCCGAAGAGGCGCGGCTCCTGGCAGAGATCGGTGCTGTGACTCTGGTCAGCGCCCCGCGCCCAGACCCTCGGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACTC--------------------------------------- i calJac3.chr22 C 0 I 2 s mm10.chr7 3694510 373 + 145441459 GGGCGGGGTCTTGCGCTGAGGGCGTGGAAGACTTCAGTCGGG---TCGGTGG----------------------------G-GCTGTTTGGGTGACCGCGACGCACCCC-CACT-CCGCAGGAAGATGCTGGTGGTGGAGGTCGCAAATGGCCGCTCGCTGGTGTGGGGAGCCGAGGCCGTGCAGGCGCTGCGGGAGCGTCTGGGAGTCGGGGGACGCACGGTGGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTTCCGCTTCTGCTGCTGCCTGAAGAAGCCCGGCTCCTGGCCGAGATAGGCGCGGTGACCCTAGTCAGCGCCCCGCGCCCGGACCCCCGCAACCATGGCTTGGTAAGAAACGAA----------------------------------AGGC-------CCTGA----------TAGTGGGAAGGCCTGGGA------------------------------------------ i mm10.chr7 I 1 C 0 s canFam3.chr1 19652025 496 - 122678785 GGGCGGGGCGT--CGCTGAGGcacccc-accccccacccccacc-ccacccccacccccacccccacctccGCGGTGGGAGCACTCTGTCGGTGACCGCTGTGCCTCCCTGGCCCCCGCAGGAGGATGCTGGTGGTGGAGGTGGCGAACGGCCGCTCCCTGGTATGGGGGGCCGAGGCGGTGCAGGCACTGCGGGAGCGTCTGGGAGTAGGGGGCCGCACGGTGGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTTCTGGCCGAAATCGGCGCGGTGACCCTGGTCAGCGCCCCGCGCCCGGATCCGCGCCAACACAGCCTGGTAAGGGGCGGACGGGGTGGGGGCGGTGCAAACGCTCAGCACGTGGAGGCAGGACAGCCAGACTGCGGGTCTCTGCGGGAGGGGTCTGGGCGCCTTGGATTCTGGAGACTGGGATCCCCAGGTTCAGGCTTT i canFam3.chr1 C 0 C 0 a score=266952.000000 s hg38.chr19_GL949747v2_alt 166595 77 + 729520 GGGTTCGGTGGGAG--C---GGGACCTGGGAGTCAAGTTTCCTGGCTTCTGAAGGGACCATAAGCT-----TGGA------GGTTCCAGCGAA s panTro4.chr19 59099278 77 + 63644993 GGGTTCGGTGGGAG--C---GGGACCTGGGAGTCAAGTTTCCTGGCTTCCGAAGGGACCATAAGCT-----TGGA------GGTTCCAGCGAA i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 55977029 77 + 60714840 GGGGTCGGTGGGAG--C---GGGGCCTGGGAGTCAGGATTCTTGGCTTCCGAAGGGACCATAAGCT-----TGGA------GGTTCCAGTGAA i ponAbe2.chr19 I 194 C 0 s nomLeu3.chr10 102746536 77 - 106955855 GGGTTCGGTGGAAG--C---GGGGCCTGGGAGTCAGGATTCTTGGCTTCCGAAGGGACCATAAGCT-----TGGA------GGTTCCAGCGAA i nomLeu3.chr10 I 194 C 0 s rheMac3.chr19 60036197 77 + 64156825 GGGTTCGGTGGGAG--C---CGGGCCTGGGAGTCAGGATTCCTGGTTTCCGAAGGGACCGTAAGCT-----TGGA------GGTTCCAGCGAA i rheMac3.chr19 I 194 C 0 s macFas5.chr19 55061620 77 + 59248254 GGGTTCGGTGGGAG--C---GGGACTTGGGAGTCAGGATTCCTGGTTTCCGAAGGGACCGTAAGCT-----TGGA------GGTTCCAGCGAA i macFas5.chr19 I 2 I 192 s papAnu2.chr19 47164086 77 + 51301725 gggttcggTGGGAG--C---GGGACTTGGGAGTCAGGATTCCTGGTTTCCGAAGGGACCGTAAGCT-----TGGA------GGTTCCAGCGAC i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 46869651 77 + 50890351 GGGTTCGGTGGGAG--C---CGGACCTGGGAGTCAGGATTCCTGGCTTCCGAAGGGACCATAAGCT-----TGGA------GGTTCCAGCGAC i chlSab2.chr6 I 194 C 0 s calJac3.chr22 45451934 77 + 49145316 GGATCTGGTGGGAG--C---GGGGCCTGAGAGTCCGGATTACTGGCTTCCGAAGCGACCATAAGCT-----TGGA------GGTTCCAGCGAA i calJac3.chr22 I 2 C 0 s mm10.chr7 3694883 81 + 145441459 GGGCCTGTTGGAAGGTT---GTAAACTG---GTCAGAATTCCTGTCTTCCTAAGGGACTGCAGGATGTGTCTTGG------GGTTCCAGTTAA i mm10.chr7 C 0 C 0 s canFam3.chr1 19652521 85 - 122678785 GGGTTAGGGAGGAG--TCAGGGAGCCAGGGAGCCAAGGTTCCTGGCTTCCTAAGGCAGGGCAGACT-----TGGATCCTGGGATTCCCGCCG- i canFam3.chr1 C 0 C 0 a score=3160539.000000 s hg38.chr19_GL949747v2_alt 166672 753 + 729520 GTGTGCTTCTCAGGCCCTGACATCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCTAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCAGCTCAA----GCCAGGAGGCCGGCTCGAGCCAGGCTGCCAAAGAGGATGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCTGGTGAG--CATGGGAGGTGGAGTCCAGGGACCACGGGAAGGAGAG-GAGAGATCTTTTAGGAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGACTTTACCCCTTGAATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGCCCCTCGTCTTCCCAAGCAGGACCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCGGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCACGAGCTGCGCTACAGTATCTACAGAGACCTGTGGGAGCGAGGCTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTATGGGTTGGGGCCTCTGGTTGCTGTGCCTTTCCATACGATCCCAATGTATTCTGCGTTTTTCTTT---------Tttttttttttgtctt s panTro4.chr19 59099355 755 + 63644993 GTGTGCTTCTCAGGCCCTGACATCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCTAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCAGCTCGA----GCCAGGAGGCCGGCTCGAGCCAGGCTGCCAAAGAGGATGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--CATGGGAGGTGGAGTCCAGGGACCACGGGAAGGAGAG-GAGAGATCTTTTAGGAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGACTTTACCCCTTGAATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGCCCCTCGTCTTCCCAAGCAGGACCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCGGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCTGGCCGCCCTGCCCACGAGCTGCGCTACAGTATCTACAGAGACCTGTGGGAGCGAGGCTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTATGGGTTGGGGCCTCTGGTTGCTGTGCCTTTCCATACGATCCCAATGTATTCTGCGTTtttcttttc-------tttttttttttgtctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55977106 752 + 60714840 GTGTGCTTCTCAGGCTCTGACATCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCTAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCTGGCTCGA----GCCAGGAGGCCGGCTCGAGCCAGGCTGTCAAAGAGGATGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--CATGGGAGGTGGAGTCCAGGGACCACGGGAAGGAGAG-GAGAGATCTTTTAGGAATTTTAGCTGGGAGTCCAGTGACTGGGTCTCCCTGAGGA-TGAGAAAACTTTACCCCTTGAATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGCCCCTCCTCTTCCCAAGCAGGACCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGGCCGGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCACGAGTTGCGCTACAGCATCTACAGAGACCTGTGGGAGCGAGGCTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTATGGGTTGGGGCCTCTGGTTGCTATGCCTTTCTATATGATCCCAATGTATTCTGTGtttttttt----------ttcttttttttgtctt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102746613 744 - 106955855 GTGTGCTTCTCAGGCCCTGACATCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCTAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCA----------------------GCTCGAGCCAGGCTGCCAAAGAGGATGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--CATGGGAGGTGGAGTCCAGGGACCACGGGAAGGAGAG-GAGAGATCTTTTAGGAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGATTTTGCCCCTTGGATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGCCCCTCCTCTTCCCAAGCAGGACCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCGGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCTGGCCGCCCTGCCCACGAGCTGCGCTACAGCATCTACAGAGACCTGTGGGAGCGAGGCTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTATGGGTTGGAGCCTCTGGTCGCTGTGCCTTTTCATACGATCCCAATGTATTCTGCGTTTTTCTTTTCTAtcttttttttttttttgtctt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60036274 758 + 64156825 GTGTGCTTCTCAGGCCCTGACAGCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCCAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCAGCTGGA----GCCATGAGGCTGGCTCGAGCCAGGCTGCCAAAGAGAACGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--TATGGGAGGTGGAGTCCACGAACCACGGGAAGGAGAG-GAGAGATCTTTTGGAAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGACTTTGCCCCTTGGATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGTCCCTCCTCTTCCCAAGCAGAGCCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCTGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCATGAGCTGCGCTACAGCATTTACAGAGATCTGTGGGAGAGAGGGTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTTTGGGTTGGGGCCTCTGGTTGCTGTGCCTTTCCATACGATCCCAATGTATTCTGCGtttttttttctttc----tttttttttttgtctt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55061889 759 + 59248254 GTGTGCTTCTCAGGCCCTGACAGCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCCAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCAGCTCGA----GCCATGAGGCTGGCTCCAGCCAGGCTGCCAAAGAGAACGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--TATGGGAGGTGGAGTCCACGAACCACGGGAAGGAGAG-GAGAGATCTTTTGGAAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGACTTTGCCCCTTGGATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGTCCCTCCTCTTCCCAAGCAGAGCCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCTGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCATGAGCTGCGCTACAGCATTTACAGAGACCTGTGGGAGAGAGGGTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTTTGGGTTGGGGCCTCTGGTTGCTGTGCCTTTCCATACGATCCCAATGTATTCTGCGTTTTTTTTTCTttct---tttttttttttgtctt i macFas5.chr19 I 192 C 0 s papAnu2.chr19 47164163 756 + 51301725 GTGTGCTTCTCAGGCCCTGACAGCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCCAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCAGCTCGA----GCCAGGAGGCCGGCTCGAGCCAGGCTGCCAAAGAGAACGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--TATGGGAGGTGGAGTCCACGAACCacgggaaggagag-gagagatcTTTTGGAAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGACTTTGCCCCTTGGATTTACCAAACTCTTCTCTGTActccccacc--------aggtccctcctcttCCCAAGCAGAGCCTTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCTGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCATGAGCTGCGCTACAGCATTTACAGAGACCTGTGGGAGAGAGGCTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGATTTCCTGGTCTATCCTGGTGAGTTTGGGTTGGGGCCTCTGGTTGCTGTGCCTTTCCATACGATCCCAATGTATTctgcgttttttttttct------tttttttttttctctt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46869728 761 + 50890351 GTGTGCTTCTCAGGCCCTGACAGCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCCAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCAGCTCGA----GCCATGAGGCCGGCTCGAGCCAGGCTGCCAAAGAGAACGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCCGTGAG--TATGGGAGGTGGAGTCCACGAACCACGGGAAGGAGAG-GAGAGATCTTTTGGAAATTTTAGCAGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGACTTTGCCCCTTGGATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGTCCCTCCTCTTCCCAAGCAGAACCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCTGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCATGAGCTGCGCTACAGCATTTACAGAGACCTGTGGGAGAGAGGGTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTTTGGGTTGGGGCCTCTGGTTGCTGTGCCTTTCCATACGATCCCAATGTATTCTGCGTTTTTTTTTTTTCTTTC-Ttttttttttggtctt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45452011 749 + 49145316 GTGTGCTTCTCAGGCCCTGACATCCTTCAAGCGCCAACAAGAGCAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGGCAGGAGCTCCTAGAGAAGATTACGGAGGGCCAGGCTGCCAAGAAGCAGAAGCTGGAACAGGCTTCAGGGGCCAGCGCGA----GCCAGGAGGCCGGCAGGAGCCAGGCTGCCAAAGTGAACGAGACCAG---TGATCTCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--CGTGGGAGGTGGAGTCCAGGGACCATGGGAAGAAAAG-GAGAGATCTTTTGGGAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCTTGAGGG-TGCGAAGACTTTGCCCCTTGGATTTACCAAACTCTTCTCTGTACT-TCAACC--------AGGCCCCTCCTCTTCCCAAGCAGGACCCTCAAATGGAGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCAAGGCCTCGACCTGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCATGAGCTGCGCTACAGCATCTACAGAGACCTGTGGGAGCGGGGCTTCTTCCTCAGCGCGGCTGGGAAGTTTGGAGGTGACTTCCTGGTCTATCCGGGTGAGTTTGGGTTGGGGCCTCTGGTTGCTATGCTAGTCTTTACAATCTCAATGTATTCTGCGGttttc------------ttacctttcttctctt i calJac3.chr22 C 0 C 0 s mm10.chr7 3694964 741 + 145441459 GTTTACTTCTCAGGCCCTAGCATCGTTCAAACGCCAGCAAGAGCAGAGTTTCCAGGATCAGAACACTTTGGCAGCCGAGGCCCGGGAGACCCGGCGTCAGGAGCTTCTAGAGAAGATCGTAGAGGGCCAGGCTGCCAAGAAGCAGAAGCTGGAACAGGATTCAGGGGC-AGATGAAGGAGGCCAAGAAGCCGGTGGAAGTGAGGCTACCCAAGGGAGTGAGACCAGTGATGATGGCCAGCCTTCTGCGGAGCAGGAGGGAGCAGGTGAGATTTTAGGATTTAGAGTTAA--AATTTGGGGCAGGAGGG-AGGGAAACTTTGGAGAATTTTAG---------------TTGGATTTTTCTGGCGC-TAAGGAGACCTTG-----TGGACTCAGTAAATTCTTTT---TGCTCCCAGCCCCATCCCTAGATTCTTCATCTCCCCAACCAGGACCTTCAAATGGGGTGACTCCCTTGCCCAGATCAGCCCTGCTTATCCAGCTGGCCACTGCCAGGCCTCGGCCTGTAAAAGCTAAGCCTCTGGACTGGCGTGTGCAGTCCAAAGACTGGCCCCATGCTGGCCGTCCTGCCCACGAGCTGCGCTACAGCATCTACCGAGACCTGTGGGAGAGAGGTTTCTTCCTCAGCGCAGCAGGGAAGTTTGGTGGTGACTTCCTGGTCTATCCTGGTGAGTTTGG---GGGGACTCTGGTGGCTGTACCTTTTCTAATGGTCTTTATTTGTTGTGCATTTTCTTTT---------TTTTGTCCCATTTCTT i mm10.chr7 C 0 I 4761 s canFam3.chr1 19652606 691 - 122678785 CTTTACTTCTCAGGCTCTGGCATCCTTCAAACGCCAGCAAGAGCAGGGCTTCCAGGAGCAAAGCGCCCTGGCAGCGGAGGCCCGTGAGACTCGTCGTCAGGAACTCCTAGAGAAGATTGCAGAGGGCCAGGCTGCGAAGAAACAGAAGCTGGAGCAGGAATCGGTGGCCAGCGAGA----GCCAGGAGGCCAGTGCGAACCCGGCTGCCGCAGAGAGTGAGGCCGG---TGCGAGCCAGGCTCCTGGAGAGCCGGAGGAAGCAGGTGAG--GGTGGGA-GTGGAGTCCACGGACCAGGAGCAGGGGAGAGGGAGATCTTTTGGGAATCCTGGCTGGGAATCTAGGGCCTGGGGCTCATTGGGGGATGGGAAGACCTG--TCCTTGGATGCATCAGACTCTTGCATTCACCTCCCGC---------AGGTTCCTCCTCTCCTCAGCCAGGGCCGTCAAATGGAGTGGCCCCTTTGCCCAGGTCGGCTCTGCTGGTCCAGCTGGCCACTGCTAGGCCTCGACCTATCAAGGCTAGGCCCCTGGATTGGCGTGTCCAGTCCAAAGACTGGCCGCATGCTGGCCGTCCTGCCCATGAGCTTCGCTATAGCATCTACAGAGACCTGTGGGAACGAGGCTTCTTCCTCAGTGCAGCTGGCAAGTTCGGGGGTGACTTCCTGGTCTATCCTGGTGAGTTTTG-TTGGGACCTCTCCTTGT-------------------------------------------------------------------- i canFam3.chr1 C 0 C 0 a score=775530.000000 s hg38.chr19_GL949747v2_alt 167425 259 + 729520 aatagaggtggggtctc--ttgttgcttaggctggtccctattcctgggctcaagcaatccttccacctcggccccccaaagtgctggaattataggcCCAGCTGCA------TTTTTCTTTTTTGTCTCACTTTCTCTTAGCCTCTGAAATTCATAGACAGACAGGAAACATTTGGGAGCTCCTGAACTCATTGGGCAAGCAGTTTAACGACTTTTATTAAATGATTACTGTGATCCAGAAGATTCACTTAGAAGT-AGTTAGACAT s panTro4.chr19 59100110 261 + 63644993 aatagaggtggggtctctattgttgcttaggctggtcccgattcctgggctcaagcaatccttccacctcggccccccaaagtgctggaattataggcCCAGCTGCA------TTTTTCTTTTTTGTCTCACTTTCTCTTAGCCTCTGAAATTCATAGACAGACAGGAAACATTTGGGAGCTCCCGAACTCATTGGGCAAGCAGTTTAACGACTTTTATTAAATGATTACTGTGATCCAGAAGATTCACTTAGAAGT-AGTTAGACAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55977858 261 + 60714840 aatagaggtggggtctctattgttccttaggctggtcccaattcctgggctcaagcaatccttccacctcagccccccaaagtactgaaattataggcCCAGCTGCA------TTTTTCTTTTTTGTCTCATTTTCTCTTAGTCTCTGAAATTCATAGACAGACAGGAAACATTTGGGAGCTCCCGAACTCATTGGGCAAGCAGTTTAATGACTTTTATTAAATGATTACTGTGATCCAGAAGATTCACTTAGAAGT-AGTTAGACAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102747357 258 - 106955855 aatagaggtggggtctctattgttgctcaggctggtcccaattcctgcgcttaagcagtccttccacctcggcctcccaaagtgctggaattacaggcCCAGCTGCA------TTTTTCTTTTTTGTCTCACTTTCTTTTAGCCTCTGAAATTCAT----AGACAGGAAACATTTGGGAGCTCCCGAACTCATTGGGCAAGCAGTTTAGCGACTTTTATTAAATGATTACTGTGATCCAGAAGATTCATTTAGAAATAAGTTAGACAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60037032 265 + 64156825 aatagagatggggtctctattgttgctcaggctggtcccgtttcctgggctcaagcagtcctcccacttcggcctcccaaagtgctgggattacaggcCCAGCGGCA--TTTTTTTTTTTTTTTTGTCTCACTTTCTCTTAGCCTCTGAAATTCATAGATGGACAGGAAACATTTTGGAGCTCCTGAACTCATTGGGAAAGCAGTTTAGCAACTTTTATTAAATGTTTACTATGATCCAGAAGATTCGCTTAGAAGT-AGTTAGACAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55062648 263 + 59248254 aatagagatggggtctctattgttgctcaggctggtcccgtttcctgggctcaagcagtcctcccacttcggcctcccaaagtgctgggattacaggcccagctgca----ttttttttttttttgtCTCACTTTCTCTTAGCCTCTGAAATTCATAGATGGACAGGAAACATTTTGGAGCTCCTGAACTCATTGGGAAAGCAGTTTAGCAACTTTTATTAAATGTTTACTATGATCCAGAAGATTCGCTTAGAAGT-AGTTAGACAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47164919 267 + 51301725 aatggagatggggtctctgttgttgctcaggctggtcccgtttcctgggctcaagcagtcctcccacctcggcctcccaaagtgctgggattacaggcccagctgcattttttttttttttttttgtctcacttTCTCTTAGCCTCTGAAATTCATAGACGGACAGGAAACATTTTGGAGCTCCTGAACTCATTGGGAAAGCAGTTTAGCaacttttattaaatgtttactgtGATCCAGAAGATTCACTTAGAAGT-AGTTAGACAt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46870489 264 + 50890351 aatagagatggggtctctattgttgctcaggctggtcccgtttcctgggctcaagcagtcctcccacctcggcctcccgaagtgctgggattacaggcCCAGCTGCA---TTTTTTTTTTTTTTTGTCTCACTTTGTCTTAGCCTCTGAAATTCATAGACGGACAGGAAACATTTTGGAGCTCCTGAAATAATTGGGAAAGCAGTTTAGCAACTTTTATTAAATGTTTACTGTGATCCAGAAGATTCGCTTAGAAGT-AGTTAGACAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45452760 257 + 49145316 aacagagatggggtctgtgttgttgctcaggctggtcccaattcctgggctcaagcaatcttcgcacctcagcctcccaaagtgctgggattacaggcCCAGCTGCA------TTTTTCTTTTTTGTCTCACTTTCTGTTAGCTTCTTACATTCACAGATGGACAAGAAACATTTGAGAGCTCCCCAACTCACTGGGCAAGCAGTTTAGCGACTCTTATTAAATGCTTACTGTGATCCAGAAGATTAACTCAGAAGC-----AGACAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19653297 183 - 122678785 ------GAAAGAGACCTCCTTTTTCCTCAAAGCCCTCCCCTTTTTT-------CGCAAGCCTGCCACC---------------------------------------------TTTTTGTCTTT------------TCTCAGCCTCTGAAACCCATGGAAGGACAAG-AAcacttgggaac---------catttgaagggcagtatagtaaatc----taagcactttctttgatccagaagtttcactcagagac-tcttagatat i canFam3.chr1 C 0 I 3128 e mm10.chr7 3695705 4761 + 145441459 I a score=339242.000000 s hg38.chr19_GL949747v2_alt 167684 112 + 729520 CAggctgggcgcaatggctcacgcctgtaatcccaacactttgggaggccaagacaggtggatcacctgaggtcaggagtttgataccagtctggccaacatggtgaaaccc s panTro4.chr19 59100371 109 + 63644993 ---gctgtgcgcaatggctcacgcctgtaatcccaacactttgggaggccaagacaggtggatcacctgaggtcaggagtttgataccagtctggccaacatggtgaaaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55978119 112 + 60714840 CAggctgggcgcagtggctcatgcctgtaatcccagcactttgaaaggccaagacaggtggatcacctgaggtcaggagtttgagaccagtctggccaacatggtgaaaccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102747615 112 - 106955855 CAggctgggcgcaatggctcacacctgtaatcccaacactttgggaggccaagacaggtggatcatctgaggtcaggagtttgagaccagtctggccaacatggtgaaaccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60037297 112 + 64156825 CAggctgggcgccatggctcacgcctgtaatcccagcactttgggaggctgagacaggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55062911 112 + 59248254 CAggctgggcgccatggctcacgcctgtaatcccagcactttgggaggctgagacaggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47165186 112 + 51301725 caggctgggcgccatggctcacgcccgtaatcccagcactttgggaggctgagacaggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46870753 112 + 50890351 CAggctgggcgccatggctcacacccgtaatcccagcactttgggaggctgagacaggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45453017 111 + 49145316 CAggccg-gtgcgatggctcacgcctgtaatctcagcactttgggagactgaggcgggcagatcacctgaggtcaggagttcaagaccagcctggccaacgtgaagaaaccc i calJac3.chr22 C 0 C 0 e mm10.chr7 3695705 4761 + 145441459 I e canFam3.chr1 19653480 3128 - 122678785 I a score=394773.000000 s hg38.chr19_GL949747v2_alt 167796 167 + 729520 catctctactaaaaatactaaaactaactgggcgtggt-ggtgggtgcctgtatttccagctactcgggaggctgaagcaggagaatcatgtgaacccagggggcagaggttgtagtgagccaagatcgtgccattgcactccagcctgggggacaagagcgagactt s panTro4.chr19 59100480 167 + 63644993 catctctactaaaaatactaaaactaactgggtgtggt-ggtgggtgcctgtatttctagctactcgggaggctgaagcaggagaatcacgtgaacccacggggcagaggttgtagtgagccgagatcgtgccagtgcactccagcctgggggacaagagcgagactt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55978231 167 + 60714840 cgtctctactaaaaatactaaaactaactaggcatggt-ggtgggcgcctgtatttccagctactcgggaggctgaggcaagagaatcacatgaacccagggggcagaggttgtagtgagccgagatcgtgccattgcactccagcctgggggacaagagcaagactt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102747727 167 - 106955855 cgtctctactaaaaatactaaaactaactgggcgtggt-ggtgggtgcctgtatttccagctactcgggaggctgaggcaggagaatcacttgaacccagggggcagaggttgtagtaaaccaagattgtgccattgcactccagcctgggggacaagaatgagactt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60037409 168 + 64156825 cgtctctactaaaaatactaaaactagctgggtgtggtgggtaggcgcctgtatttccagctactcaggaggctgaggcaggagaatcacttgaacccagggggcagaggttgcagtgagctgagatggtgccattgtactccagcctggcgaacaagagcgagactt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55063023 168 + 59248254 cgtctctactaaaaatactaaaactagctgggtgtggtgggtaggcgcctgtatttccagctactcaggaggctgaggcaggagaatcacttgaacccagggggcagaggttgcagtgagctgagatggtgccactgcactccagcctggggaacaagagcgagactt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47165298 168 + 51301725 cgtctctactaaaaatactaaaactagctgggtgtggtgggtaggcgcctgtatttccagctactcgggagcctgaggcaggagaatcacttgaacccggggggcagaggttgcagtgagctgagatcgtgccattgcactccagcctggggaacaagagcgagactt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46870865 168 + 50890351 cgtctctactaaaaatactaaaactagctgggtgtggtgggtaggcacctgtatttccagctactcgggaggctgaggcaggagaatcacttgaacccagggggcagaggttgcagtgagctgagatcatgccattgtactccagcctggggaacaagagcgagactt i chlSab2.chr6 C 0 C 0 e mm10.chr7 3695705 4761 + 145441459 I e canFam3.chr1 19653480 3128 - 122678785 I e calJac3.chr22 45453128 0 + 49145316 C a score=13970.000000 s hg38.chr19_GL949747v2_alt 167963 15 + 729520 tgtctc----aaaaaaaaa s panTro4.chr19 59100647 19 + 63644993 tgtctcaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55978398 11 + 60714840 tgtctc--------aaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102747894 13 - 106955855 cgtctc------aaaaaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60037577 12 + 64156825 cgtctc-------aaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55063191 13 + 59248254 cgtctc------aaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47165466 11 + 51301725 cgtctc--------aaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46871033 16 + 50890351 cgtctc---aaaaaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45453128 8 + 49145316 tgtctt-----------ta i calJac3.chr22 C 0 C 0 e mm10.chr7 3695705 4761 + 145441459 I e canFam3.chr1 19653480 3128 - 122678785 I a score=234839.000000 s hg38.chr19_GL949747v2_alt 167978 78 + 729520 aaaaaaaaaaaGCCTAGAAGTGGAATAGTTGTGTCCAAG-AGCATCTGTTTTAGAGTATCTATAGTGATGGCTGAAATG s panTro4.chr19 59100666 78 + 63644993 aaaaaaaaaaaGCCTAGAAGTGGAATAGTTGTGTCCAAG-AGCATCTGTTTTAGAGTATCTATAGTGATGGCTGAAATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55978409 78 + 60714840 aaaaaaaaaaaGCCTAGAAGTGGAATAGCTGTGTCCGAG-AGCATCTGTTTTAGAGTATCCATAGTGATGGCTGAAATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102747907 78 - 106955855 aaaaaaaaaaaGCCTAGAATTGGAATAGTTGGGTCCAAG-AGCATCTGTTTTAGAGTATCCATAGTGATGGCTGAAATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60037589 77 + 64156825 aaaaaaaaaaaGTCTAG-AGCGGAATAGTTGGGTCCAAG-AGCATCTGTTTTAGAGTATCCATAGTGATTGCTGAAATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55063204 77 + 59248254 aaaaaaaaaaaGTCTAG-AGCGGAATAGTTGGGTCTAAG-AGCATCTGTTTTAGAGTATCCATAGTGATTGCTGAAATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47165477 77 + 51301725 aaaaaaaaaaagtctag-agcGGAATAGTTGGGTCCAAG-AGGATCTGTTTTAGAGCATCCATAGTGATCGCTGAAATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46871049 77 + 50890351 aaaaaaaaaaaGTCTAG-AGCGGAATAGTTGGGTCCAAG-AGCATCTGTTTTAGAGTATCCATAGTGATTGCTGAAATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45453136 78 + 49145316 aaagaaaaaaaatCTAGAAGTGTAGTAGTTG-GTCCAAGCATTATCTGGTTTAGACCATCCAGAGGAGTTGCTGAAATG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19656608 78 - 122678785 aagtaaaaaatgccaaaaagtggaactgctaggtacaag-aagagctatttggaaatattcatagtgattactaaaatg i canFam3.chr1 I 3128 C 0 e mm10.chr7 3695705 4761 + 145441459 I a score=2580084.000000 s hg38.chr19_GL949747v2_alt 168056 661 + 729520 ATCTCAGATCTCCTCCCAGTGGTCGTTCCCGTGGCGTCCAGCCGTCTGCCATTGGTCACTGCTTCAGTGCCTCTCTCCTTCCCCCAGGTGACCCCCTCCGCTTCCACGCCCATTATATCGCTCAGTGCTGGGCCCCCGAGGACACCATCCCACTCCAAGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAACTCCAGAGACCTA-GGGGATGTGGCTGTGTCGGCAGCAAGAGCCTTTCTGGATGTT--CCCCAGCTCTTCTCTG------GGAGTCTAGAACATCCTCCTACCTTTCTCCGCGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACATCTTTTTTATGT--------------TCTTCCTTGTTTCAAAGCACTTattggctgtg---t--ttttgtagttacctattttcacactgtgagcttcccgagaatggggcctg----ggtttgattca--tct--gttttctacagggtttaagtctcaggaggtctcaataaacttggtatataaat-----gttcatgatttgaatgtttgcgacagtcctggaaccc------gtggatggtctcatctgcatgtacaggtgagaaaaaggcctggagggg s panTro4.chr19 59100744 661 + 63644993 ATCTCAAATCTCCTCCCAGTGGTCGTTCCCGTGGCGTCTAGCCCTCTGCCATTGGTCACTGCTTCAGTGCCTCTCTCCCTCCCCCAGGTGACCCCCTCCGCTTCCACGCCCATTATATCGCTCAGTGCTGGGCCCCCGAGGACACCATCCCACTCCAAGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAACTCCAGAGACCTA-GGGGATGTGGCTGTGTCGGCAGCAAGAGCCTTTCTGGATGTT--CCCCAGCTCTTCTCTA------GGAGTCTAGAACATCCTCCTACCTTTCTCCGCGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACATCTTTTTTATGT--------------TCTTCCTTGTTTCAAAGCACTTattggctgtg---t--ttttgtagttacctattttcacactgtgagcttcccgagaatggggcctg----ggtttgattca--tct--gttttctacagggtttaagtctcaggaggtctcaataaacttgttacataaat-----gttcatgatttgaatgtttgcgacagtcctggaaccc------gtggatggtctcatctgcatgtacaggtgagaaaaaggcctggaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55978487 660 + 60714840 ATCTCAAATCTCCTCCCAGTGGTCATTCCCGTGGCGTCCAGCCCTCTGCCATTGGTCACTGCTTCAGTGCCTCTCTCCCTCCCCCAGGTGACCCCCTTCGCTTCCACGCTCATTACATCGCTCAGTGCTGGGCCCCCGAGGACCCTATCCCACTCCAAGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAACTCCAGAGACCTAGGGGGATGTGGC--TGTCTGCAGCAAGAGCCTTTCTGGATGTT--CCCCAGCTCTTCTCTG------GGAGTCTAGAACATCCTTCTACCTTTCTCCATGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACATCATTTTTATGT--------------TCTTCCTTGTTTCAAAGCACATattggctgtg---t--ttttgtagttacctattttcacactgtgagcttcccgagaatggggcctg----ggtttgattca--tct--gttttctacagggtttaagtctcaggaggtctcaataaacttgttatataaat-----gttcatgatttgaatgtttgcgacagtcctggaaccc------ctggatggtctcatctgcatgtacagatgagaaaaaggcctggaggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102747985 650 - 106955855 ATCTCAAAT---CTCCCAGTGGTCGTTCCTGTGGTGTCCAGCCCTCTGCCATTGGTCACTGCTTCAGTGCCTCTCTCCCTCCCCCAGGTGACCCCCTCCGCTTCCACGCCCATTACATCGCTCAGTGCTGGGCCCCCGAGGACCCCATCCCACTCCAAGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAGCTCCAGAGACCTAGGGGGATGTGGCTGTGTCTGCAGCAAGAGCCTTTCTGGAGGTT--CCCCAGCTTTTCTCTG------GGAGCCTAGAACATC---CTACCTTTCTCCGTGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACGTCCTTTTTATGT--------------TCTTCCTTGTTTCAAAGCACTTATTGGCTGTG---T--TTTTGTAGTTCCCTGTTTTCACACCGTGAGCTTCCCGAGAATG------G----GGTTTGATTCA--TCT--GTTTTCTACAGGGTTTAAATCTCAGGAGGTCTCAAtaaacttgttatataaat-----gttcatgatttgaatgtttacgacagtcctggtacct------gtggatggtctcatctgcatgtacagatgagaaaaaggcctggaggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60037666 661 + 64156825 ATCTCAAATCTCCTCCCAGTGGTCATTCCTGTGGCATCCAGCCCTCTGCCATTGGTCACTGCTTCAGCGCTTCTCTCCCTCCCCCAGGTGACCCCCTCCGCTTCCATGCCCACTACATTGCTCAGTGCTGGGCCCCGGAGGACCCCATCCCACTTCAGGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAACTCCA-AGACCTAGGGGGACATGGCTGTGTCTGCAGCAAGAGCCTTTCTAGATGTT--CCCCAGCTCTTCTCTG------GGAGTCTAGAACATCCTCCTACCTTTCTCTGCGGTTAGTTTTTGATTCCAGGTTTTCGAACACTAcatcctttttatgt--------------tcttccttgtttgaaagcacttattggctgtg---t--ttttgtagttacctgttttcacactgtgagcttcctgagaatggggcctg----ggtttgattca--tct--gttttctacagggtttaagtctcaggagatctcaataaacttgttatataaat-----gttcatgatttgaatgtttatgataaacctggaaccg------gtggatagtctcatctgcatatacagatgagaaaaaggcctggaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55063281 661 + 59248254 ATCTCAAATCTCCTCCCAGTGGTCATTCCTGTGGCATCCAGCCCTCTGCCATTGGTCACTGCTTCAGCGCTTCTCTCCCTCCCCCAGGTGACCCCCTCCGCTTCCATGCCCACTACATCGCTCAGTGCTGGGCCCCGGAGGACCCCATCCCACTCCAGGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAACTCCA-AGACCTAGGGGGACATGGCTGTGTCTGCAGCAAGAGCCTTTCTAGATGTT--CCCCAGCTCTTCTCTG------GGAGTCTAGAACATCCTCCTACCTTTCTCTGCGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACATCCTTTTTATGT--------------TCTTCCTTGTTTGAAAGCACTTATTGGCTGtg---t--ttttgtagttacctgttttcacactgtgagcttcctgagaatggggcctg----ggtttgattca--tct--gttttctacagggtttaagtctcagaagatctcaataaacttgttatataaat-----gttcatgatttgaatgtttatgacaaacctggaaccg------gtggatagtctcatctgcatatacagatgagaaaaaggcctggaggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47165554 661 + 51301725 ATCTCAAATCTCCTCCCAGTGGTCGTTCCTGTGGCATCCAGCCCTCTGCCATTGGTCACTGCTTCAgtgcttctctccctcccccaggtgACCCCCTCCGCTTCCATGCCCACTACATCGCTCAGTGCTGGGCCCCGGAGGACCCCATCCCACTCCAGGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAACTCCA-AGACCTAGGGGGACATGGCTGTGTCTGCAGCAAGAGCCTTTCTAGATGTT--CCCCGGCTCTTCTCTG------GGAGTCTAGAACATCCTCCTACCTTTCTCTGCGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACATCCTTTTTATGT--------------TCTTCCTTGTTTGAAAGCACTTATTGGCTGTG---T--TTTTGTAGTTACCTGTTTTCACACTGTGAGCTTCCTGAGAATGGGGCCTG----GGTTTGATTCA--TCT--GTTTTCTACAGGGtttaagtctcaggagatctcaATAAACTTGTTATATAAAT-----GTTCATGATTTGAATGTTTATGACAAACCTGGAACCG------GTGGATAGTCTCATCTGcatatacagatgagaaaaaggcctggaggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46871126 660 + 50890351 ATCTCAAATCTCCTCCCAGTGGTCGTTCCTGTGGCATCCAGCCCTCTGCCATTGGTCACTGCTTCAGTGC-TCTCTCCCTCCCCCAGGTGACCCCCTCCGCTTCCATGCCCACTACATCGCTCAGTGCTGGGCCCCGGAGGACCCCATCCCACTCCAGGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCCGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCTTGCAATGGGCCAGCCTGCAGTGAACTCCA-AGACCTAGGGGGACATGGCTGTGTCTGCAGCAAGAGCCTTTCTAGATGTT--CCCCAGCTCTTCTCTG------GGAGTCTAGAACATCCTCCTACCTTTCTCTGCGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACATCCTTTTTATGT--------------TCTTCCTTGTTTCAAAGCACTtattggctgtg---t--ttttgtagttacctgttttcccactgtgagcttcctgagaatggggcctg----ggtttgattca--tct--gttttctacagggtttaagtctcaggagatctcaataaacttgttatataaat-----gttcatgatttgaatgtttatgacaaacctggaaccg------gtggatagtctcatctgcatatatagatgagaaaaaggcctggaggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45453214 662 + 49145316 CTCTCGCATCTCCCACCAGCAGTCACTCCTGTGGCTTCTA-CCCCCTGCCATTGGCCACTGCTTCAGTGCCTCTGTCC--CCACCAGGTGACCCACTCCGCTTCCACGCCCACTACATCGCTCAGTGCTGGGCCCCCGAGGACCCCATCCCACTCCAGGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGCTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAGTGGGCCAGCCTGCAGTGAACTCCAGAGACCTAGGCGGATGTGGCTGTGTCGGCAGCAAGAGCCTTTCTGGATGTT--CCCAAGCTTTT-TCTG------GGAGTCTAGAACATCCTCCCACCTTTCTCTGCGCTTAGTTTTTGATTCCAGGTTTTCCAACGCTAAGTCCTTTTTATGT--------------TCTTCCTTGTCTCAAAGCACTTCCTGGCTGTG---TTGTTTTGCAGTTACCTGTTTTCACactgtgagcttcctgagaatgggaactg----ggtttgattcatctct--gttttctacaggggttaagtctcaggaggtctcaataaacttgttatctgaat-----gTTCATGAGttgaattcttatgacaatcctggaacct------gctggcggtcttatctgcatgtacagatgagaaaaaggcctggaggag i calJac3.chr22 C 0 C 0 s mm10.chr7 3700466 621 + 145441459 ATGTCAGATCTCATCCCAG-----------------------CCCCTGCGGAGGGGAACTGCT---ATGCATCTTTCTTTCCCCCAGGTGATCCACTGCGTTTCCATGCTCACTACATTGCTCAGTGCTGGTCTGCTGAGGACCCCATCCCACTTCAGGACCTGGTCTCTGCAGGCCGCCTGGGAACCAGTGTCAGGAAGACCCTGCTGCTCTGCTCCCCTCAGCCTGATGGGAAGGTGGTCTACACATCCCTGCAGTGGGCCAGCCTGCAGTGAGCT------------GGAGAC-------TGTGTGTGGCAAGAACCCTCTTCAATGGTCACCCCAGCTCATCTCTGCAC---GGAGGCTTG--CGCTCTCCTGC---TCTGCCTGGTTTG-TTCCGATTCCAGGGTTTTGAACACTACATCCTTTCTGTTTGTTTTTTGGTTTTGTTTTTCCTGTTTTAAGGCGATTACTACCTGTG---TTGTTCTTTATTT---TGTTTCCAAATTGT--GCTTGTTGAGCATGGAGACTGCTTTTGTTTGGCTTT--TGT--GTTTCTTGCGGGGCTTAGGTTCCTGCAGTTCT-AATAAATTTGTTGAATAAAT-----GTTTGTATTttgagtccttacaacaatccttgaaatg------tggggc--tctcattcctgtattcagatgagaaaa-------gggaat i mm10.chr7 I 4761 C 0 s canFam3.chr1 19656686 677 - 122678785 -ATTCCTGTCTCCTACCTGTAGACATTCCAGTGTCTTCTAGCCTTCTACCACTGGGAACTGCTACA---TGTCTCTCTTTTACCCAGGTGACCCACTTCGTTTCCACGCCCACTACATTGCTCAGTGCTGGGCTCCTGGGGACCCCATTCCACTCCAGGACCTGGTTTCTGCTGGCCGCCTGGGGACCAGCGTCAGAAAGACGCTGCTGCTCTGTTCCCCTCAGCCTGATGGTAAAGTGGTCTACACCTCCCTGCAGTGGGCCAGCCTACAGTGAACTCCAGAGACCCGTGGGGATGTGGCTGCATCTGTGGAAAGAGCCTTTCTAGATGGT--CCCAAGCTCATCTCTGCAAATGGGAGGCTGTTA-ACCCTCCTACCTCTTTCTGCGGTTAGATTTTGACTCCGGATTTATAAACACTACATCCTTCTTATTT--------------CCCTCCCTGTTTCAAAGCACTTATTGGCtgtgatat--ttttgtagttacctatttccaagctgtgagcttcttgagggtgaagactg----ggtttgattca--tctccagtttctacagggcttagggc-caagaggtctcagtaaacttgttgaataaacgCGGAGTCTGTGTTTTGAATTCTGATGGCAATGGGGGGAGGGGGCAGTGTGGGTTTTTGCATTTGCTTATACAGAGGAGGGAA-TGCCTGGAGGAG i canFam3.chr1 C 0 I 1091 a score=386208.000000 s hg38.chr19_GL949747v2_alt 168717 121 + 729520 ggggactgacttgcccaaagtcacacacttagtaaatagcaggcctggcctttcaaaattggtttttctgactcctaaatctgcactctttctacctcactaaactt-cctctTGAAAAGAT s panTro4.chr19 59101405 121 + 63644993 ggggactgacttgcccaaagtcacacacttagtaaatagcaggcctggcctttcaaaattggtttttctgactcctaaatctgcactctttctacctcactaaactt-ccttttgAAAAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979147 122 + 60714840 ggggaatgacttgcccaaagtcacacacttagtaaatagcaggcctggcctttcaaaattggtttttctgactcctaaatctgcactctttctaccgcactaaacttcccttttgAAAAGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102748635 120 - 106955855 ggggaatgatttgcccaaagtcacacgcttagtaaatagcaggcttggcctttcaaaattgg-ttttctgactcctaaatctgcactctttctaccgcactaaactt-ccttttgAAAAGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60038327 121 + 64156825 ggggaatgacttgcccaaagtcacacagttagtaaatagcaggcctggcctttcaaaattggttttcctcactcctaaatctgcactctttctaccgcactaaactt-ccttttgAAAAGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55063942 121 + 59248254 ggggaatgacttgcctaaagtcacacagttagtaaatagcaggcttggcctttcaaaattggttttcctcactcctaaatctgcactctttctaccgcactaaactt-cctttTGAAAAGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166215 121 + 51301725 ggggaatgacttgcccaaagtcacacagttagtaaatAGCAGGCCTGGCCTTTCAAAATTGGTTTTCCTCACTCCTAAATCTGCACTTTTTCTACCGCACTAAACTT-CCTTTTGAAAAGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46871786 121 + 50890351 ggggaatgacttgcccaaagtcacatagttagtaaatagcaggcctggcctttcaaaattggttttcctcactcctaaatctgcactctttctaccgcactaaactt-cctttTGAAAAGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45453876 118 + 49145316 ggg--atgacttgcc-aaggtcacacagctagtcaacagcaggcctggcctttaaaaatgtttttttctgactcctaaatctgcactctttctaccacactaaactt-ccttttgAAAAGAT i calJac3.chr22 C 0 C 0 s mm10.chr7 3701087 110 + 145441459 gggaaatgacttgaccagggtcacaaaact----------gggcctgggccattatacctggtctttgtgattcaggaatctgc-ctcttttcattgcactaAGGGT-TGCCTTGAAGATAT i mm10.chr7 C 0 I 2697 e canFam3.chr1 19657363 1091 - 122678785 I a score=518199.000000 s hg38.chr19_GL949747v2_alt 168838 210 + 729520 TTCTATGAAATTTCCCAGATGCATACAAACGTtataaataaaaatat---------aggctgggcacgatgacccacacctgtaatcccacagaacttttggaggccaaggcagggggatcgcttgagcccaggagtttgagaccagctctggc-aacattgtaatacccagtctctacaaaaaataatttaaaaaaaaattagccag----------ggatcccttgag s panTro4.chr19 59101526 210 + 63644993 TTCTATGAAATTTCCCAGATGCATACAAACGTTATAAATAAAAATAT---------Aggctgggcacgatgacccacacctgtaatcccacagaacttttggaggccaaggcaggaggatcgcttgagcccaggagtttgagaccagctctggc-aacattgtaatacccagtctctacaaaaaataattaaaaaaaaaattagccag----------ggatcccttgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979269 210 + 60714840 TTCTATGAAATTTTCCAGATGCATACAAAGGTTATAAATAAAAATAT---------Aggccgggcacgatggcccacacctgtaatcccacagaacttttggaggccaaggcaggaggatcgcttgagcccaggagtttgagaccagctctggc-aacattgtaatacccagtctctacaaaaaataatttaaaaaaaaattagccag----------ggatcccttgag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102748755 218 - 106955855 CTCTATGAAATTTCCCAGATGCATACAAAGGTTATAAATAAAAATATAGGCCTGGCAggccgggcgtggtggctcacgcctgtaatcc--cagcactttgggaggccgaggtgggcggatca--tgaggtcaggagatcaagac--atcctggctaacatggtgaaaccctgtctctactaaaaat------acaaaaaattagccgggcgtggtggcgggtgcctgtag i nomLeu3.chr10 C 0 I 9 s rheMac3.chr19 60038448 204 + 64156825 TTCTACAAAATTTCCCAGATGCATACAAAGGTTATAAATAAAAATAT---------Aggctgggcatgatggcccacacctgtaatcccacagaacttttggaggccaaggcaggaggatcgcttgagtctaggagtttgagaccagctctggc-aacactgtaataccca-tctctacaaaaaataattt-taaaaaaattag--------------GGATCCCTTGAG i rheMac3.chr19 C 0 I 58 s macFas5.chr19 55064063 204 + 59248254 TTCTACAAAATTTCCCAGATGCATACAAAGGTTATAAATAAAAATAT---------Aggctgggcatgatggcccacacctgtaatcccacagaacttttggaggccaaggcaggaggatcgcttgagtccaggagcttgagaccagctctggc-aacactgtaataccca-tctctacaaaaaataattt-taaaaaaattag--------------ggatcccatgag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166336 204 + 51301725 TTCTACAAAATTTCCCAGATGCATACAAaggttataaataaaaatat---------aggctgggcatgatggcccacacctgtaatcccacagaacttttggaggccaaggcaggaggatcgcttgagtccaggagtttgagaccagctctgGC-AACACTGTAataccca-tctctacaaaaaataattt-taaaaaaattag--------------ggatcccttgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46871907 204 + 50890351 TTCTATAAAATTTCCCAGATGCATACAAAGGTtataaataaaaatat---------aggccgggcatgatggcccacacctgtaatcccacagaacttttagaggccgaggcaggaggatcgcttgagtccaggagtttgagaccagctctggc-aacactgtaataccca-tctctacaaaaaataattt-aaaaaaaattag--------------ggatcccttgac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45453994 188 + 49145316 TTCTATGAAACTTCTCAGATGCATGC-------ATAAATAAAAATAT---------Aggctgggcgtgatggctcacacctgtaatcccacagcactttgggaggccatcgcaggaggattgcttg--------------agaccagctctggt-gacgctgtaataccccatctctacaaaaaaataatt-taaaaaaattagccag----------ggatcccttaag i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19657363 1091 - 122678785 I a score=38892.000000 s hg38.chr19_GL949747v2_alt 169048 16 + 729520 cctgggaagttgaggc s panTro4.chr19 59101736 16 + 63644993 cctgggaagttgaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979479 16 + 60714840 cctggaaagttgaggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102748982 16 - 106955855 ctcgggaggctgaggc i nomLeu3.chr10 I 9 I 485 s macFas5.chr19 55064267 16 + 59248254 cctgggaagttgaggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166540 16 + 51301725 cctgggaagttgaggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872111 16 + 50890351 cctgggaagttgaggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454182 16 + 49145316 cctgggaagttgaggc i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19657363 1091 - 122678785 I e rheMac3.chr19 60038652 58 + 64156825 I a score=70805.000000 s hg38.chr19_GL949747v2_alt 169064 27 + 729520 tgctgtgagctgtgattgcaccactgc s panTro4.chr19 59101752 27 + 63644993 tgctgtgagctgtgattgcaccactgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979495 27 + 60714840 tgctgtgagctgtgattgcaccactgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749483 27 - 106955855 tgctgtgagctgtgattgcaccactgc i nomLeu3.chr10 I 485 C 0 s macFas5.chr19 55064283 27 + 59248254 tgctgtgagctgtgattgcaccactgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166556 27 + 51301725 tgctgtgagctgtgattgcaccactgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872127 27 + 50890351 tgctgtgagctgtgattgcaccactgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454198 27 + 49145316 tgctgtgagctgtgatcgcaccactgc i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19657363 1091 - 122678785 I e rheMac3.chr19 60038652 58 + 64156825 I a score=130611.000000 s hg38.chr19_GL949747v2_alt 169091 68 + 729520 cctccagcctgggagacagagcaag--aacctgtctcaaaaa------atatatatatgtgtgtgtgtatatatgt s panTro4.chr19 59101779 68 + 63644993 cctccagcctgggagacagagcaag--aacctgtctcaaaaa------atatatatatgtgtgtgtgtatatatgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979522 66 + 60714840 actccagcctgggagacagagcaag--aacctgtctcaaaaa--------atatatacgtgtgtgtgtatatatgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749510 70 - 106955855 actccagcctgggagacagaacaag--accgtgtctcaaaaaa----tatatatatatgtgtgtgtgtatatatgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60038710 51 + 64156825 TATCCAGCCTGGGAGACAGAGCAAG-------------------------ACATGTATGTGTGTGTGTATATATAT i rheMac3.chr19 I 58 I 32 s macFas5.chr19 55064310 50 + 59248254 actccagcctgggagacagagcaag-------------------------acAtgtatgtgtgtgtgtatatatg- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166583 69 + 51301725 actccagcctgggagacagagcaag--atcctgtctcaaaaa-----tctacatgtatatatatgtgtgtatatat i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 46872154 69 + 50890351 actccagcctgggagacagcgcaag--atcctgtctcaaaaa-----tctatatgtatatatacgtgtgtatatat i chlSab2.chr6 C 0 I 2 s calJac3.chr22 45454225 76 + 49145316 actccaacataggagacagagcaagagaccttgtctcaaaaaaaaagtgtgtgtctgtgtgtgtgtgaatatatat i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19657363 1091 - 122678785 I a score=11518.000000 s hg38.chr19_GL949747v2_alt 169159 8 + 729520 aaatatac s panTro4.chr19 59101847 8 + 63644993 aaatatac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979588 8 + 60714840 aaatatac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749580 8 - 106955855 aaatacac i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47166654 8 + 51301725 aaatacac i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 46872225 8 + 50890351 aaatatac i chlSab2.chr6 I 2 C 0 s calJac3.chr22 45454301 8 + 49145316 acatatgt i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19657363 1091 - 122678785 I e macFas5.chr19 55064360 0 + 59248254 C e rheMac3.chr19 60038761 32 + 64156825 I a score=17468.000000 s hg38.chr19_GL949747v2_alt 169167 26 + 729520 acacatgtatgtatatatatgtgtgt s panTro4.chr19 59101855 26 + 63644993 acacatgtatgtatatatatgtgtgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979596 26 + 60714840 acacgtatgtgtatatatatatgtgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749588 11 - 106955855 atacacgtgtg--------------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60038793 20 + 64156825 ------AAatctatatgtatatatat i rheMac3.chr19 I 32 C 0 s macFas5.chr19 55064360 1 + 59248254 -------------------------t i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166662 26 + 51301725 acacgtacgtgtgtgtatagatatgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872233 26 + 50890351 acacacacgtatgtgtgtgtgtatgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454309 26 + 49145316 atatgtgtgtgtgtatatatgtatat i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19657363 1091 - 122678785 I a score=1007313.000000 s hg38.chr19_GL949747v2_alt 169193 331 + 729520 gtatatatatatatattatGAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCCTGGGGAG--AA----AGGAAGGACTCTGGAA-----GGCGTTCTGC--------TTTTTCATGGCCTGGGTAGTGGTGG-----------AGAATT-TTTTTGATACTGTATATTTATATTTTAGACTC-TTTTTTGGA--TGTGTTATATTCTGCAATTTTTATAAAAGCTAAAACACATGTATTTGTAAAAAATTTGCACTTATGAAATCATTTACCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTACCACTA-----TTCCAATAATTACACCTTTATCTTATCAATGTGCAGTTTTATTTTGTCA s panTro4.chr19 59101881 335 + 63644993 gtgtatatgtatatatTATGAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCCTGGGGAG--AACGTCAGGAAGGACTCTGGAA-----GGCGTTCTGC--------TTTTTCATGGCCTGGGTAGTGGTTG-----------AGAATT-TTTTTGATGCTGTATATTTATATTTTAGACTC-TTTTTTGGA--TGTGTTATATTCTGCAATTTTTATAAAAGCTAAAACACATGTATATGTAAAAAATTTGCACTTATGAAATCATTTACCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTACCACTA-----TTCCAATAATTACACCTTTATCTTATCAATGTGAAGTTTTATTTTGTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979622 329 + 60714840 g----tatatatatatCATAAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCATGGGGAG--AACGTCAGGAAGTACTCTGGAA-----GGCGTTCTGC--------TTTTTCATGGCCTGGGTAGTGGTTG-----------AGAATT-TTTTTGATACTGTACATTTATATTTTAGACTC---TTTTGGA--TGTGTTATATTCTGCAGTTTTTATAAAAGCTAAAACACATGTATATGTAAAAAACTTGCACTTACAAAATCATTTACCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTATGTTTA-----TTCCAATAATTACACCTTTATCTTATCAATGTGCAGTTTTATTTTGTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749599 328 - 106955855 -----tgtatatatatCATGAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCATGGGGAG--AATCTCAGGAAGGACTCTGGAA-----GGCGTTCTGC--------TTTTTCACGGCCTGGGTAGTGGTTG-----------AGAATT-TTTTTGATACTGTACATTTATATTTTAGACTC-TTTTTTGGA--TGTGTTATATTCTGCAATTTTTATAAAAGCTAAA--ACATGTATATGTATAAAATATGCACTTATGAAATCATTTACCCATGTTTTTGCTTAAGA--AAGTACTGGAACACTACCATTA-----TTTCAATAATTACACCTTTATCTTATCAATATGCAGTTTTATTTTGTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60038813 336 + 64156825 gtgtgtgtatatatatCATGAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCGTGGGGAG--AGTGTCAGGAATGACTCTGGAA-----GGCATTCTGC--------TTTTTCATGGCCTGGGTAGTGGTTG-----------AGAATT-TTTTTGATACTATACATTTATATTTTAGACTCTTTTTTTGGA--TTTGTTATATTCTGCAATTTTTATAAAAGCTAAAACACATGTATATGTATAAAATATGCACTTACGAAATCATTTATCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTACCACTA-----TTCCAATAATTTCACCTTTATCTTATCAATATGCAGTTTTATTTTGTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55064361 336 + 59248254 gtgtgtgtATATATATCATGAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCGTGGGGAG--AGTGTCAGGAATGACTCTGGAA-----GGCATTCTGC--------TTTTTCATGGCCTGGGTAGTGGTTG-----------AGAATT-TTTTTGATACTATACATTTATATTTTAGACTCTTTTTTTGGA--TTTGTTATATTCTGCAACTTTTATAAAAGCTAAAACACATGTATATGTATAAAATATGCACTTACGAAATCATTTATCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTACCACTA-----TTCCAATAATTTCACCTTTATCTTATCAATATGCAGTTTTATTTTGTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166688 336 + 51301725 gtgtgtgtatatatatcatgaAAGGAA-----ATGAG--TATTGTAATTTCAGGA-----GTTCAGAGCATGGGGAG--AGTGTCAGGAAGGACTCTGGAA-----GGCATTCTGC--------TTTTTCATGGCCTGGGTAGTGGTTG-----------AGAatt-tttttgatactatacatttatattttagattctttttttgga--tttGTTATATTCTGCAATTTTTATAAAAGCTaaaacacatgtatatgtataaaatatgcaCTTACGAAATCATTTATCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTACCACTA-----TTCCAATAATTACACCTTTATCTTATCAATATGCAGTTTTATTTTGTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872259 336 + 50890351 gtgtgtgtgtgtATATCATGAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCATGGGGAG--AGTGTCAGGAAAGACTCTGGAA-----ggcattctgc--------tttttcatggcctgggtagtggttg-----------agaatt-tttttgatactatacatttatattttagactctttttttgga--tttgttatattctgcaattTTTATAAAAGCTAAAACACATGTATATGTGTAAAATATGCACTTACGAAATCATTTATCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTACCACTA-----TTCCAATAATTTCACCTTTATCTTATCAATATGCAGTTTTATTTTGTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454335 331 + 49145316 gtacatacatatgAAAGAAAAAAGGAG-----ATGAGAATATTGTAATTTTAGGA-----GTTCAGAGCATGGGGAG--GATGTCAGGAAGGACTCTGGAA-----GGCGTTCTGC--------TTTTTCATGGCCTGGGTAGTAGTTG-----------AGAATT-TTTTTGCTGCTGTACATTGATATTTTAGACTC-GTTTTTTTA--TGTGTTATATTCTGCAACTTTTACAAAAGCTAAA--ACATGTATGTGTATAAAATACGCACTTTTGAAATCGTTTACCCACGGTTTTGCTTAGAACTCGGTACTGGAACACTGCCACAA-----ATCTAGT------ACCTTTATCCTACCAGTGTGCAGTTTTATTTTGTCA i calJac3.chr22 C 0 I 17 s canFam3.chr1 19658454 358 - 122678785 GCATAAATAAAAGTAACATGAAGAAAAGGCACATGAG--TGTTGCAGTTTCAGGACAGAGGTTCAG---GTggggaggtaatgtcaggagggacacttggggctgtggaatgctgctggtggtttttttcttggcctgggtggtgtttattcaggtgtgtagcattattttttataccatacgtttatgattcagatcatttttttatatgtgtgttctgttccacCCTTTCTTAAAAAGTGGAAACACATCCA----AAGAAAATACACATTTGTGAGAT---------GCCTTTCTGCTTGAAA--TATTGCTTGAACGTTATCAGTACTGACTTTCAATATTTACGTATATACTTTAAAAATGCATAG------TTTGTTA i canFam3.chr1 I 1091 C 0 e mm10.chr7 3701197 2697 + 145441459 I a score=67452.000000 s hg38.chr19_GL949747v2_alt 169524 26 + 729520 CGTTTATTTTGTCAGTGTAATACATT s panTro4.chr19 59102216 26 + 63644993 CGTTTATTTTGTCAGTGTAATACATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979951 26 + 60714840 CGTTTATTTTGTCAGTGTAATACATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749927 26 - 106955855 CATTTATTTTGTCGGTGTAATACATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039149 26 + 64156825 CGTTTATTTTGTCAGTGTAATACATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55064697 26 + 59248254 CGTTTATTTTGTCAGTGTAATACATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47167024 21 + 51301725 CG-----TTTGTCAGTGTAATACATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872595 26 + 50890351 CGTTTATTTTGTCAGTGTAATACATT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19658812 26 - 122678785 CATAGATTTTGTTACTGAAATACAGT i canFam3.chr1 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e calJac3.chr22 45454666 17 + 49145316 I a score=666814.000000 s hg38.chr19_GL949747v2_alt 169550 311 + 729520 CACATGGTGAGTctgggcgtggtggcttatgcttgtaatcccagcactttgggagaccaaggcgggcggatcatgaggtcaggagttccagagcatcctggccaacatgg------cccgcctctatgaaaaatacaaaaatt-agccgggcgtggtggcgggcgcctgtaatcctagctactccggaggctgaggcaggagaatcacttgaatctgggaggtggaggttgcagtgagccaaggtcacgccactgcactccagtctgggcgacagagctagacactgtctcaaaaaaacaaaaacaaacaaaa---aCTTC s panTro4.chr19 59102242 311 + 63644993 CACATCATGAggctgggcgtggtggcttatgcttgtaatcccagcactttgggagaccaaggcgggcggatcatgaggtcaggagttccagagcatcctggccaacatgg------cccacctctatgaaaaatacaaaaatt-agccgggcgtggtggcgggcgcctgtaatcctagctactccggaggctgaggcaggagaatcacttgaatctgggaggtggaggttgcagtgagccaaggtcacgccactgcactccagtctgggcgacagagctagacactgtctcaaaaaaacaaaaacaaacaaaa---aCTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979977 311 + 60714840 CACATGGTGAggctgggcgtggtggcttatgcttgtaatctcagcactttgggagacgaaggcgggcggatcacgagatcaggagttcgagaccatcctggccaacatgg------cccacctctacgaaaaatacaaaaatt-agctgggcgtggtggcaggcgcctgtaatccctgctactcgggaggctgaggcaggagaatcacttgaatctgggaggtggaggttgcagtgagccaaggtcgcgccactgcactccagtctgggtgacagagctagacactgtctcaaaaaaacaaaaacaaacaaaa---aCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749953 317 - 106955855 CACACGGTGAggccgggcatggtggctcatgcttgtaatcccagcactttgggaggccaaggcgggcggatcacaaggtcaggagttcgagaccatcctggccaacatggtgaaaccctgcctctacgaaaactacaaaaatt-agctgggcatggtggcgggcgcctgtaatcccagctactcgggtggctgaggcaggagactcacttgaatctgggaggcggaggttgcagtgagccaaggtcgcgccactgcactccagtctgggcaacagagctagacactgtctcaaaaaaacaaaaacaaacaaaa---aCTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039175 314 + 64156825 CACATGGTGAggccgggcgcaggggctta------caatcccagcactttgggaggctgaggcgggcagatcacgaggtcaggagttcgacaccatcctggccaacatgctgaaaccctgcctctactaaaaatgcaaaaattgagccaggc-tggtggcgggtgcctgtaatcctagctacttgggaggctgaggcaggagaattgcttgaactcgggaggcagaggttgcagtgagccgagatcgtgccactgcactccagtctgggcgacagagctagactctgtctcaataaaacaaaaacaaacaaaaaagaCATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55064723 315 + 59248254 CACATGGTGAggccgggcgcaggggctta------caatcccagcactttgggaggctgaggcgggcagatcacgagatcaggagttcgacaccatcctggccaacatgctgaaaccctgcctctactaaaaatgcaaaaattgagccgggcgtggtggcgggtgcctgtaatcctagctacttgggaggctgaggcaggagaattgcttgaactcgggaggcagaggttgcagtgagccgagatcgtgccactgcactccagtctgggcgacagagctagactctgtctcaataaaacaaaaacaaacaaaaaagaCATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47167045 313 + 51301725 CACATGGTGAGGCCGGGCGCA-Gggctta------caatcccagcactttgggaggccgaggcgggcagatcacggaGGTCGGAgttcgacaccatcctggccaacatggtgaaaccccgcctctactaaaaatgcaaaaatt-agccgggcgtggtggcgggtgcctgtaatcctagctactcggcaggctgaggcaggagaattgcttgaactcgggaggcagaggttgcagtgagccgagatcgtgctactgcactccagtctgggcgacagagctagactctgtctcaaaaaaacaaaaacaaacaaaaaagacatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872621 310 + 50890351 CACATGGTGAggccgggcgcaggggctta------caatcccagcactttgggaggctgaggcgggcagatcacgaggtcaggatttcgacaccatcctggccaacatgctgaaaccctgcctctactaaaaatgcaaaaatt-agccgggcgtggtggcgggtgcctgtaatcctagctacttgggaggctgaagcaggagaattgcttgaactcaggaggcagaggttgcagtgagccgagatcgtgccactgcactccagtctgggcgacagagctagactctgtctcaaaaaaacaa----aaacaaaaaagaCATT i chlSab2.chr6 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19658838 0 - 122678785 C e calJac3.chr22 45454666 17 + 49145316 I a score=23180.000000 s hg38.chr19_GL949747v2_alt 169861 7 + 729520 CACATGG s panTro4.chr19 59102553 7 + 63644993 CACATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980288 7 + 60714840 CACATGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750270 7 - 106955855 CATATGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039489 7 + 64156825 CACATGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55065038 7 + 59248254 CACATGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47167358 7 + 51301725 caCATGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872931 7 + 50890351 CACATGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19658838 7 - 122678785 CACATGG i canFam3.chr1 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e calJac3.chr22 45454666 17 + 49145316 I a score=185482.000000 s hg38.chr19_GL949747v2_alt 169868 59 + 729520 TAA-AATTCTGGGGCTGAAAGTCTCCACCTCTAGTTCTTCCATTTCTTCCCCCCATGTTT s panTro4.chr19 59102560 59 + 63644993 TAA-AATTCTGGGGCTGAAAGTCTCCACCTCTAGTTCTTCCATTTCTTCCCCCCATGTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980295 59 + 60714840 TAA-AATTCTGGGGCTGAAAGTCTCCACCTCTAGTTCTTCAATTTCTTCCCCCCACGTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750277 59 - 106955855 TAA-AATTCTGGGGCTGAAAGTCTCCACCTCTAGTTCTTCAATTTCTTCCCCCCATGTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039496 59 + 64156825 TAA-AGTTCTGGGGCTGAAAGTCTCCACTGCTAGTTCTTCAATTTCTTCCCCCCATGTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55065045 59 + 59248254 TAA-AGTTCTGGGGCTGAAAGTCTCCACCGCTAGTTCTTCAATTTCTTCCCCCCATGTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47167365 59 + 51301725 TAA-AGTTCTGGGGCTGAAAGTCTCCACTGCTAGTTCTTCAATTTCTTCCCCCCATGTTT i papAnu2.chr19 C 0 M 1926 s chlSab2.chr6 46872938 59 + 50890351 TAA-AGTTCTGGGGCTGAAAGTCTCCACCGCTAGTTGTTCAATTTCTTCCCCCCATGTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454683 58 + 49145316 TAG-AATTCTGGGGCTGAAAGTCTTTATTTCTAGTTCTT-AATTTCTTTTCCCTACATAt i calJac3.chr22 I 17 I 30 s canFam3.chr1 19658845 47 - 122678785 TAATGATTCTGGAGCTGAAAGTGTCTATCTCTAGTTTCCCAATGTCT------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I a score=335456.000000 s hg38.chr19_GL949747v2_alt 169927 141 + 729520 CATTCTTTCTCTTTTTTGTgtgaattgagcagcctctggaaccagaataggtttagagagactccCA---TCTCCCCTCTTTCTTGCCATTCCCAGTAAACAGACTTCATAGAATCTCA-ATTTCCTGTAAGTTTAGATTAATTT s panTro4.chr19 59102619 141 + 63644993 CATTCTTTCTCTTTTTTGTgtgaattgagcagcctctggaaccggaataggtttagagagactccCA---TCTCCCCTCTTTCTTGCCATTTCCAGTAAACAGACTTCATAGAATCTCA-ATTTCCTGTAAGTTTAGATTAATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980354 139 + 60714840 CATTCTTTCTCTTTTTTGTgtgaattgagcagcctc--gaaccggaataggtttagagagactccCG---TCTCCCCTCTTTCTTGCCATTCCCAGTAAACAGACTTCATAGAATCTCA-ATTTCCTGTAAGTTTAGATTAATTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750336 141 - 106955855 CATTCTTTCTCTTTTTTGcgtgaattgagcagcctctggaaccagaataggtttagagagactccCA---TCTCCCCTCTTTCTTGCCATTCCCAGTAAACAGACTTCATAGAATCTCA-ATTTCCTGTAAGTTTAGATTAATTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039555 140 + 64156825 CATTCTTTCTCTTTTTTGTgtgaattgagcagcctctagaaccagaataggtttagagagactccCA---TCTTCCCTCTTTCTTGCCATTCCCAGTAAACAGAC-TCATAGAATCTCA-ATTTCCTTTAAGTTTAGATTAATTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55065104 140 + 59248254 CATTCTTTCTCTCTTTTGTgtgaattgagcagcctctagaaccagaataggtttagagagactccCA---TCTTCCCTCTTTCTTGCCATTCCCAGTAAACAGAC-TCATAGAATCTCA-ATTTCCTTTAAGTTTAGATTAATTT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46872997 140 + 50890351 CATTCTTTCTCTTTTTTGTgtgaattgagcagcctctagaaccagaataggtttagagagactccCA---TCTCCCCTCTTTCTTGCCATTCCCAGTAAACCGAC-TCATAGAATCTCA-ATTTCCTTTAAGTTTAGATTAATTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454771 136 + 49145316 TTCTCTCTCTCTCTCTTCTgtgaattgagcggcctctggaatcagaataggttttgagagacttcCA---TCTCCCCACTTTCTTGACATTACCAGTAAACAGACTTCATAGAATCTCA-ATTTCCTAAAGGT-----TTAATTT i calJac3.chr22 I 30 C 0 s canFam3.chr1 19658892 87 - 122678785 ----------------------------------------------------------GGGCTGCCAATTTCTTCTTTCTTTTCTATACTTCTCAGTAAACAAATTTGCTAGAACCTCATATTTCCTGTAAGCTTAGATTAATTT i canFam3.chr1 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=228705.000000 s hg38.chr19_GL949747v2_alt 170068 99 + 729520 AAAATATGACACTGggccaggcgtggtggctcacacctgtaatcccagcactttgggaggctgaggtgggcagat-------------gagtttgagatcagcctggccaat s panTro4.chr19 59102760 99 + 63644993 AAAATACGACACTGggccaggcgtggtggctcacacctgtaatcccagcactttgggaggctgaggtgggcagat-------------gagtttgagatcagcctggccaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980493 99 + 60714840 AATATACGACATTGggctaggcgcggtggctcacacctgtaatcccagcactttgggaggctgaggtgggcagat-------------gagtttgagatcagcctggccaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750477 112 - 106955855 AAAATACGACACTGggccgggcatggtggctcacacctgtaatcccagcactttgggaggctgaggtgggcagatcacctgaggtcaggagtttgatatcagcctggccaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039695 112 + 64156825 AAAATATGATACTGggccaggcgtggtggctcacgcctgtaatcccagcactttgggaggctgtggtaggcagatcacctgaggtcaggaatttgagaccagcctggccaac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55065244 112 + 59248254 AAAATATGATACTGggccaggcgtggtggctcacgcctgtaatcccagcactttgggaggctgtggtaggcagatcacctgaggtcaggaatttgagaccagcctggccaac i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46873137 112 + 50890351 AAATTGTGATACTGggccaggcgtggtggctcatgcctgtaatcccagcactttgggaggctgtggtaggcagatcacctgaggtcaggaatttgagaccagcctggccaac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454907 112 + 49145316 AAAATACGACACTGggctgggtgtggtggctcccgcctgtaatcctagcactttgggagtctgaggtgggtggatcacctaaggtcaggagtttgacactagcctggccaat i calJac3.chr22 C 0 I 1042 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19658979 0 - 122678785 C e papAnu2.chr19 47167424 1926 + 51301725 M a score=445780.000000 s hg38.chr19_GL949747v2_alt 170167 210 + 729520 atggtgaaaccccatctctactaaaaatacaaaaaaaaaaattagccgggcgtggtggcatgcgcctgtactcctagctactcaggagcctaaggcaggagaatcacttgaatccaggaggcagaggttgcagtgagccaagatcgcactactacactccagcctgggcaacaagagctaaact-ccatctc-aaaaaaataaaaagaaaag s panTro4.chr19 59102859 209 + 63644993 atggtgaaaccccatctctactaaaaatac-aaaaaaaaaattagccgggcgtggtggcatgcacctgtactcctagctactcaggagcctaaggcaggagaatcacttgaatccaggaggcagaggttgcagtgagccaagatcgcactactacactccagcctgggcaacaagagctaaact-ccatctc-aaaaaaataaaaagaagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980592 209 + 60714840 atggtgaaaccccctctctactaaaaata--gaaaaaaaaattagccaggcgtggtggcacgcgcctgtactcctagctactcaggagcctaaggcaggagaatcacttgaacccaggaggcagaggttgcagtgagccaagattgcaccactacactccagcctgggcaacaagagctaaactcccatctc-aaaaaaataaaaagaaaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750589 207 - 106955855 atggtgaaaccccatctctactaaaaata--caaaaaaaaattagccgggtgtggtagcacgtgcctgtactcctagctactcaggaggctaaggcaggagaatcacttgaacccaggaggcagaggttgtactgagccaagatcacactactacactccagcctgggcaacaagagct-aact-ccgtctc-aaaaaaataaaaagaaaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039807 209 + 64156825 atggtaaaatcccatctctactaaaaata--caaaaaaaaattagctgggcgtggtggtgcacacctgtactcctagctactcaggagcctaaggcaggagaatcgcctgaacccaggaggcagaggttgcagtgagcccagatcgtgccactgtactccagcctgggcaacaagagctaaact-ccatctcaaaaaaaaaaaaaagacaag i rheMac3.chr19 C 0 I 23 s macFas5.chr19 55065356 207 + 59248254 atggtaaaatcccatgtctactaaaaata--caaaaaaaaattagctgggcgtggtggtgcacacctgtactcctagctactcaggagcctaaggcaggagaatcacctgaacccaggaggcagaggttgcagtgagccaagatcgtgccactgtactccagcctgggcaacaagagctaaact-ccatctc--aaaaaaaaaaaagacaag i macFas5.chr19 C 0 I 14 s chlSab2.chr6 46873249 205 + 50890351 atggtaaaatcccatctctactaaaaata--caaaaaaaaattagctgggcatggtggtgcacacctgtactcctagctactcaggagcctaaggccggagaatcacctgaacccaggaggcagaggttgcagtgagccaagattgtgccactgtactccagcctgggcaacaagagctaaact-ccatctc---aaaaaaaaaaagacaa- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45456061 205 + 49145316 atggtgaaaccccgtctctactaaaaata--c---aaaaaattagctgggcattgtggcgcgtgcctgtaatcccagctactcgggaggctgaggcaggagaattgcctgaacccaggaggcggaggttgtggtgagccgagattgcgccattgcactccagcctgggtaacaggagcgaaact-ccgtctc-aaaaaaaaaaaaggaaaag i calJac3.chr22 I 1042 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19658979 0 - 122678785 C e papAnu2.chr19 47167424 1926 + 51301725 M a score=704.000000 s hg38.chr19_GL949747v2_alt 170377 2 + 729520 aa s panTro4.chr19 59103068 2 + 63644993 aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980801 2 + 60714840 aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750796 1 - 106955855 -a i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55065577 2 + 59248254 AG i macFas5.chr19 I 14 C 0 s chlSab2.chr6 46873454 1 + 50890351 -g i chlSab2.chr6 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19658979 0 - 122678785 C e calJac3.chr22 45456266 0 + 49145316 C e papAnu2.chr19 47167424 1926 + 51301725 M e rheMac3.chr19 60040016 23 + 64156825 I a score=1426.000000 s hg38.chr19_GL949747v2_alt 170379 14 + 729520 aaaaaa-TGACGCTA s panTro4.chr19 59103070 14 + 63644993 aaaaaa-TGACGCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980803 14 + 60714840 aaaaaa-TGACGCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750797 14 - 106955855 aaaaaa-TGGCACTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55065579 7 + 59248254 AAAAAAG-------- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46873455 6 + 50890351 aCAGTA--------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45456266 6 + 49145316 ---------aCACTA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19658979 14 - 122678785 AAAACA-GGACACTA i canFam3.chr1 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e papAnu2.chr19 47167424 1926 + 51301725 M e rheMac3.chr19 60040016 23 + 64156825 I a score=398898.000000 s hg38.chr19_GL949747v2_alt 170393 152 + 729520 ACCCCTGTCTGGCCAATACTC---TCTTTGTGCCTGCTTCATAATTGGCTTTGTAAGTCTATTCTCCACCCTTTCTCCTCTCTACAACAAAGTACTTAGAAGTCTC-------ATTCCCTCTGTCATGAGTCTCTCCTCTGAAAAGTTCCTCATTTAAAACT s panTro4.chr19 59103084 155 + 63644993 ACCCCTGTCTGGCCAATACTCTCTTCTTTGTGCCTGCTTCATAATTGGCTTTGTAAGTCTATTCTCCACCCTTTCTCCTCTCTACAACAAAGTACTTAGAAGTCTC-------ATTACCTCTGTCATGAGTCTCTCCTCTGAAAAGTTCCTCATTTAAAACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980817 155 + 60714840 ACCCCTGTCTGGCCAATACTCTCTTCTTTATGCCTGCTTCATAAGTGGCTTTGTAAGTCTATTCTCCACCCTTTCTCCTCTCTACAACAAAATACTTAGAAGTCTC-------ATTATCTCTGTCATGAGTCTCCCCTCTGAAAAGTTCCTCATTTAAAATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750811 155 - 106955855 ACCCCTGTCTGGCCAATACTCTCTTCTTTGTGCCTCCTTCATAAGTGGCTTTGTAAGTCTATTCTCCACCCTTTCTCCTCTCTACAATAAAGTACTTAGAAGTCTC-------ATTACCTCTGTCATGAGTCTCCCCTCTGAAAAGTTCCTCATTTAAAACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60040039 152 + 64156825 ACCCCTGCCTGGCCAATACTC---TCTTTGTGCCTGCTTCATAAGTGGCTTTGTATGTCTATTCTCCACCCTTTCTCCTGTCTACAACAAAGTACTTAGAAGTCTC-------ATTACCTCTGTCAGGAGTCTCCGCTCTGAAATGTTCCTCATTTAAAACC i rheMac3.chr19 I 23 C 0 s macFas5.chr19 55065586 152 + 59248254 ACCCCTGCCTGGCCAATACTC---TCTTTGTGCCTGCTTCATAAGTGGCTTTGTATGTCTATTCTCCACCCTTTCTCCTGTCTACAACAAAGTACTTAGAAGTCTC-------ATTACCTCTGTCAGGAGTCTCCGCTCTGAAATGTTCCTCATTTAAAACC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46873461 155 + 50890351 ACCCCTGCCTGGACAATACTCTCTTCTTTGTGCCTGCTTCATAAGTGGCTTTGTATGTCTATTCTCCACCCTTTCTCCTATCTACAACAAAGTACTTAGAAGTCTC-------ATTACCTCTGTCACGAGTCTCCGCTCTGAAATGTTCCTCATTTAAAACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45456272 151 + 49145316 ACCTCTGTCTGGCCAAGACTA--ATCTTTGTGCCTGTTTGATAAGCGGC-TTGTAAGTCTATGCTCTACCCTTTCTCCTCTCTACAAC-AAGTAATTAGATGTCTC-------AGTACCTCTGTCATGAGCCTCTCCTCTGAAAAGTTTCTCATTCAAAACT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19658993 159 - 122678785 ATCCCTGCCTCATTAACACTCTGTTCTTTGTGCCTCTTTGATAACTGGC-TTGCAAATCTATTCTCCAGGCTCTCTCTTCTCTACAACAAAGTACTTAGTTGACTCAGTACTGAGTACCTCTGTCTTGAGTCTTCCCTC--AAAAATTCCTCATTAAAAACT i canFam3.chr1 C 0 I 64854 e mm10.chr7 3701197 2697 + 145441459 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=820469.000000 s hg38.chr19_GL949747v2_alt 170545 383 + 729520 CCTGTggccagatgtggtggctcagacctgtaatcctagcactttgggaggccaaggtgggaagatcagttgagccgctgagctcaggagtttgagaccagccttggctgaacatagtgagacctcatctcatctctattt-aaaacaaacaaacaaaAAAAAACTTTTGTGACTGGTGTccccccatgttgtcagtcaacaaattctataggtgccatgttcaaagcactgtggatcca-cagttaggcccc-accctccaccttcactgccagtatcttagaaaaaccaaaccatggctcatttgatattgatagcttcctaactcatcccctgccttccattcttgcccctctgttgtctgttttcaacagagcagccagaat s panTro4.chr19 59103239 379 + 63644993 CTTGTggccagatgtggtggctcagacctgtaatcctagcactttgggaggccaaggtgggaagatcagttgagccgctgagctcaggagttcgagaccagccttggctgaacatagtgagacctcatctcatctctattt-aaaacaaacaaac----aaaCACTTTTGTGACTGGTGTccccacatgttgtcagtcaacaaattctgtaggtgccgtgttcaaagcactgtggatcca-cagtttcgcccc-accctccaccttcactgccagtatcttacaaaaaccaaaccatggctcgtttgatattgatagctttctaactcatcccctgccttccattcttgcccctctattgtctgttttcaacagagcagccagaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980972 382 + 60714840 CTTGTggccagatgtggtggctcagacctgtaatcctagcactttgggaggccaaggtgggaagatcagttgagcagttgagctcaggagttcgagaccagccttggctgaacatagtgagacttcatctcatctctatttaaaaacaaaaaaac--aaAAAAACTTTTGTGACTGGTGTccccacatgttgtcagtcaacaaattctataggtgccatgttcaaagcactgtggatcca-cagtttggcccc-accctccaccttcactgccagtatcttagaaaaaccaaaccatggctcatttgatcttgatagcttcctaactgatcccctgccttctattcttgcccctctattgtctgttttcaacagagcagccagaat i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 102750966 381 - 106955855 CTTGTggccagatgtggtggctcagacctataatcctagcactttgggaggccaaggtgggaagatcagttgagcaggtgagctcaggagttagagaccagccttggctgaacatagtgagacctcatctcatctctattt-aaaaaaaaaaaaa--aaaAAAAAGTTTGTGACTGGTGaccccacatattgtcagtcaacaaattctataggtgccatgttcaaagcactgtggatcca-cagtttggcccc-accctccaccttcactgccagtatcttagaaaaaccaaaccatggctcatttggtcttgatagcttcctaactcatcccctgccttctattcttgcccctctattgtttgttttcaacagagcagccagaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60040191 366 + 64156825 CTTGTggctgggtgtggtggctcagacctataatcctagcagtttgggaggccaaggtgggaagatcagt--------tgagctcaggagtttgagaccagcctgggctgaacatagtgagacctcgtctcgtctctattt-aa-------aaac--aaaaaaaCTTTTGTGACTGGTGTccccacatgttgtcagtcaacaaattctataggtgccatgttcaaagcactgtggatcca-cagtttggcccc-accctccaccttcactaccagcatcttagaaaaaccgaaccatggctcatttgatcttgatagcttcctaactcatgccctgcctgctattcttgcccctctattgtctgttttcaacagagcagccagaat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55065738 366 + 59248254 CTTGTggctgggtgtggtggctcagacctataatcctagcagtttgggaggccaaggtgggaagatcagt--------tgagctcaggagtttgagaccagcctgggctgaacatagtgagacctcgtctcgtctctattt-aa-------aaac--aaaaaaaCTTTTGTGACTGGTGTccccacatgttgtcagtcaacaaattctataggtgccatgttcaaagcactgtggatcca-cagtttggcccc-accctccaccttcactaccagcatcttagaaaaaccgaaccatggctcatttgatcttgatagcttcctaactcatgccctgcctgctattcttgcccctctattgtctgttttcaacagagcagccagaat i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46873616 367 + 50890351 CTTGTggctgggtgtggtggctcagacctgtaatcctagcactttgggaggccgaggtgggaagatcagt--------tgagctcaggagtttgagaccaccctgggctgaacatagtgagacctcgtctcgtctctattt-aa-------aaac--aaaaaaGCTTTTGTGACTGGTGTccccacatgttgtcagtcaacaaattctataggtgccatgttcaaagcactgtggatccaccagtttggccct-accctccaccttcactgccagcatcttagaaaaaccgagccatagctcatttgatcttgatagcttcctaactcatgccctgcctgctattcttgcccctctattgtgtgttttcaacagagcagccagaat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45456423 347 + 49145316 TTTGTggctgggtgtggtggctcaggcctgtaatcctagcactttgggaggccagggtgggaagatcagt--------tgagctcaggagttcgacaccagcctgagctgaacatagtgagac-----ctcgcctctattt-aa----aaaaaaa--aagaaaACTTTTGTGACTGATGTTTc--catgtcatcagtcaacaaattctgtaggtgccatgttct-----------------aagtttggcccctgccctccaccttcactggcagcatcttagaaaaaccaaaccattgctcatttgatcctaatagtgtcctaactcatcccctgccttctagccttgcccctctgttgactgttttcaacagagcagccagaat i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=8022.000000 s hg38.chr19_GL949747v2_alt 170928 4 + 729520 catc s panTro4.chr19 59103618 4 + 63644993 catc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102751347 4 - 106955855 catc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60040557 4 + 64156825 catc i rheMac3.chr19 C 0 I 527 s macFas5.chr19 55066104 4 + 59248254 catc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46873983 4 + 50890351 catc i chlSab2.chr6 C 0 I 535 s calJac3.chr22 45456770 4 + 49145316 catc i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e ponAbe2.chr19 55981354 1 + 60714840 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=1508.000000 s hg38.chr19_GL949747v2_alt 170932 5 + 729520 gtttt s nomLeu3.chr10 102751351 5 - 106955855 atttt i nomLeu3.chr10 C 0 I 3534 s macFas5.chr19 55066108 5 + 59248254 atatt i macFas5.chr19 C 0 I 522 s calJac3.chr22 45456774 5 + 49145316 atatt i calJac3.chr22 C 0 I 1137 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e ponAbe2.chr19 55981354 1 + 60714840 I e chlSab2.chr6 46873987 535 + 50890351 I e papAnu2.chr19 47167424 1926 + 51301725 M e rheMac3.chr19 60040561 527 + 64156825 I e panTro4.chr19 59103622 0 + 63644993 C a score=28885.000000 s hg38.chr19_GL949747v2_alt 170937 319 + 729520 tttttttgtttttttttttttttttttttttgaggcggagtctcgctgtcgcccaggctggagtgcagtggcgcgatctctgctcactgcaagctccgcctcccggattcacgccattctcctgcctcagcctccctagtagccgggactacaggcgcccgccacctcacctggctaattttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgaccttgtgatccacccgcctcggcctcccaaagtgctggggttacaggcgtgagccaccgcgcccggccagaatcatc s panTro4.chr19 59103622 312 + 63644993 -------gtttttttttttttttttttttttgaggcggagtctcgctgtcgcccaggctggagtgcagtggcatgatctctgctcactgcaggctccgccccccgggttcacgccattctcctgcctcagcctccctagtagctgggactacaggcgcccgccacctcacctggctaattttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctggggttacaggcgtgagccaccgcgcccggccagaatcatc i panTro4.chr19 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e ponAbe2.chr19 55981354 1 + 60714840 I e calJac3.chr22 45456779 1137 + 49145316 I e nomLeu3.chr10 102751356 3534 - 106955855 I e chlSab2.chr6 46873987 535 + 50890351 I e papAnu2.chr19 47167424 1926 + 51301725 M e macFas5.chr19 55066113 522 + 59248254 I e rheMac3.chr19 60040561 527 + 64156825 I a score=175752.000000 s hg38.chr19_GL949747v2_alt 171256 664 + 729520 atattaaaagataagtcagaccatgtcacagctctgtctaaaactttcctggagttttccatctcagagtaaaactcaaaggtcctactttgcagcttcctcatgaactggccATGTGCATtctcttccttgcttattattattattattatttattttttttatttttgagacagagtcttgctctgttgcccaggctggagtgcagtggcacaatctcggcccactgcagcctctgcctcctgggttcaagtgggttcaagcgattctcccacctcagcctcccaagtacctgggattacaggcgcctgccaccacgtcaggctaattttttgtattttagtagagacagggtttcaccataattgcccaggctcgaactcctgagctcaggcaatccgcccacctcagcctcccaaagtgctaggattatagacatgagccaccgtgcccggccagctttgttcctctttactgctggatattccattgtatggacataaccccattttatttatccattcatcaggtgattggcatttgtttctagttaaggacAAGGTTTTGGTTTTGGTTTTTGttttatttacccttgttcatgcagtatccccaggtccaagaacagttcctggcacac----agcagtcaatacattgttgctaaataa s panTro4.chr19 59103934 665 + 63644993 atattaaaagataagtcagaccatgtcacagctctgtctaaaactttgctggagttttccatctcaaagtaaaactcaaaggttccactttgcagcttcctcatgaactggccATGTGCATTCTCTTCCTTGCttattattattattattat---tattttttatttttgagacagagtcttgctctgttgcccaggctggagtgcagtggcacaatctcggcccactgcagcctctgcctcctgggttcaagtgggttcaagcgattctcccacctcagcctcccaagtatctgggattacaggcgcctgccaccacgtcaggctaattttttgtattttagtagagacggggtttcgccataattgcccaggctcgaactcctgagctcaggcaatccgcccacctcagcctcccaaagtgctaggattatagacatgagccaccgtgcctggccAGctttgttcctctttactgctggatattccattgtatggacataaccccattttatttatccattcaccaggtgattggcatttgtttctagttaaggacAAGGTTTTGGTTTTTCTTTTTGttttatttacccctgttcatgcagtatccccaggtccaagaacagttcctggcacacagtaagcagtcaatacattgttgctaaataa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55981355 657 + 60714840 atattaaaagataagtcagaccatgtcacagctctgtctaaaactttcctggagttttccgtctc--agtaaaactc--aggtccCACTTTGCAGCTTCCTCATGAACTGGCCATGTGCATCCTCTTCCTTGCttattattattatttttat-------ttttatttttgagacagagtcttgctctgttgcccaggctggagtgcagtggcacaatctcagcccactgcagcctctgcctcctgggttcaagtggattcaagcgattctcccacctcagcctcccaagtacctgggattacaggcgcctgccaccacgtcaggctaattttttgtattttagtagagacagggtttcaccataattgcccaggctcgaactcctgagctcaggcaatccacccacctcagcctcccaaagtgctaggattataggcatgagccaccatgcccggccAGctttgttcctctttactgctgaatattccattgtatggacataaccccattttatttatccattcaccaggtgattggcatttgtttctagttaaggacAAGGTTTTGGTTTTGGTTTTGGttttatttacccttgttcatgcagtatccccaggtccaagaacagttcctggcacatagtaagcagtcaatacattattgctaaataa i ponAbe2.chr19 I 1 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e calJac3.chr22 45456779 1137 + 49145316 I e nomLeu3.chr10 102751356 3534 - 106955855 I e chlSab2.chr6 46873987 535 + 50890351 I e papAnu2.chr19 47167424 1926 + 51301725 M e macFas5.chr19 55066113 522 + 59248254 I e rheMac3.chr19 60040561 527 + 64156825 I a score=368666.000000 s hg38.chr19_GL949747v2_alt 171920 773 + 729520 atgagtGGCTTAAACTATAATTTTTAAATCAG----GGCTGAGACAATTTGGAAATTATAATTTCTCC---TACATGACTTTCTAAGCATATTTTAAATAAATATACATACGTTAAGGTCATTTTTATTAATGAAAATTGTAGCATACTATGCACACTTCTGCATCTTGCTTATTGGATATGCCCAGGCTTGTCTCATTTTTGCCAACAGCTACATGGTTTTGCGTCCTATGGATGGGGCATAATTAGATTTTATTACACTTGTACAAAAG----GAAAGGAATTCAGCTCCCCAAGCATGCCCAGCTGGTCCTTGGCAACCCATGATGGAAACCAAGGGTTCCTCTTATATTACCCGTGCTCCTTTCAGAGAGGAAGGGCTAGAGGGCTCCAGCCTGAGTGAGAGAGAGAGAGGAGGAAGCATGAGGGGTTTGTGGAAGAGGGCCTGGTGCCATATGACTGGACCATGCTTCTGAAGAGGATCAGGGTGAGGCCAGATCTCATcagttgacccttgagcaacatgggtctgaactgctcgggtccacttttatgcagattGAAAAAAGTAaaggttacacagagcatgcctgcctctcctgctttgccttttacctcctccacctctggcaccctgagacagcaagaccaaaccctcctcttctttctgcacctctgcctactcagaatgaagacaaggatgaagacctttatgatgatccacttccacttaatgaatagtaaatatatt--ttctcttttttagaattttcttaatattttctt s panTro4.chr19 59104599 772 + 63644993 atgagtGGCTTAAACTATAATTTTTAAATCAG----GGCTGAGACAATTTGGAAATTATAATTTCTCC---TACATGACTTTCTAAGCatattttaaataaatatatataCGTTAAGGTCATTTTTATTAATGAAAATTGTAGCATACTATGCACACTTCTGCATCTTGCTTATTGGATATGCCCAGGCTTGTCTCATTTTTGCCAACAGCTACATGGTTTTGCGTCCTATGGATGGGGCATAATTAGATTTTATTACACTTGTACAAAAG----GAAAGGAATTCAGCTCCCCAAGCATGCCCAGCTGGTCCTTGGCAACCCATGATGGAAACCAAGGGTTCCTCTTATATTACCCATGCTCCTTTCAGAGAGGAAGGGCTAGAGGGCTCCAGCCTGAGTGAGAGAGAGAGAGGAGGAAGCATGAGGGGTTTGTGGAAGAGGGCCCGGTGCCATATGACTGGAGCATGCTTCTGAAGAGGATCAGGGTGAGGCCAGATCTCATcagctgacccttgagcaacatgggtctgaactgctcaggtccacttttatgcagattGAAAGAAGTAaaggttacacagagcatgcctgcctctcctgctttgccttgtacctcctccacctctggcaccctgagacagcaagaccaaaccctcctcttccttctgcacctctgcctactcagaatgaagacaaggatgaagacctttatgatgatccacttccacttaatgaatagtaaatatatt--ttctcttttttagaattttcttaatattttc-t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55982012 773 + 60714840 atgagtGGCTTAAACTATAATTTTTAAATCAG----GGCTGAGACAATTTGGAAATTATAATTTCTCC---TACACGACTTTCTAAGCATATTTTAGATAAATATACATACGTTAAGGTCATTTTTATTAATGCAAATTGTAGCATACTATGCACACTTCTGCAGCTTGCTTATTGGATATGCCCAGGCTTGTCTCATTTTTGCCAACAGCTACATGGTTTTGCGTCCTATGGATGGGGCGTAATTAGATTTTATTACACTTGTACAAAAG----GAAAGGAATTCAGCTCCCCAAGCATGCCCAGCTGGTCCTTGGCAACCCATGATGGAAACCAAGGGTTCCTCTTATATTACCCGTGCTCCTTTCAGAGAGGAAGGGCTAGAGGGCTCCAGCCTGAGTGAGAGAGAGAGAGGAGGAAGCATGAGGGGTTTGTGGAAGAGGGCCCGGTGCCATATGACTGGACCATGCTTCTGAAGAGGATCAGGGTGAGGCCAGATCTTATcagctgacccttgagcaacatgggtctgaactgctcaggtccacttttatgcagattGAAAAAAGTAaaggttacacagagcatgcatacctctcctgctttgccttttacctgctccacctctggcaccctgagacagcaagatccaaccctcctcttccttctccacctctgcctactcagaatgaagacaagaatgaagacctttaggatgatccacttccacttaatgaatagtaaatatatt--ttctcttttttagaattttcttaatattttctt i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45457916 759 + 49145316 ATGAGTGGTTTAAACTATCATTTTTAAATCAAGGCTGGCTGAGACAACTTGGAAATTATAATTTCCCCTAATATACGACTTTCTAAGCATATTTTTAATATGCATTTATG----------ATTTTTATTAATGCAAATTGTAGCATACTATACACAC-TCAGCAGCTTGCTTTTTTGATATGCCCAGGCTTGCTTCATTTTTGCAAACAGCTACATGCTTTTGCGTCCTACAGATGGGGCATAATTAGATTGTATTACACTTGTACAAAAGAAAAGAAAGGAATTCAGCTCCCCAAGCATGCCCAACTGGTCCCTGGCAACCCATGATGGAAACCAAGGGTTCCTTTTATATTACCTGTGTGCCTTTCAGAGCAGAAGGGCCAGAGGGCTCCAGGCTGAGTGAAAG-------GGAGGAAGCATGAGGGGTTTGTGGAAGAGGGGCCAGTGCCCTGTGATTGGACCATGCTTCTGAAGAGGATCAAGGTGAGGCCCAGTCTCATcagctgacccttgagcaacatgagtctgaactgctcagctccacttac-tgcagatttAAAGAAGTAaaggtcacac--agcatgcctacctctcctgctttgccttttaccccctccacctctgccaccttgaggcagcaagaccaatccctcctcctcct------cctctgtctactcagcatgaggacaaggatgaagacctttataatgatctgcttcctcttaatgaatagtaaatggattcatgtcttttctcaaagttttcttaatattttatt i calJac3.chr22 I 1137 I 429 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e nomLeu3.chr10 102751356 3534 - 106955855 I e chlSab2.chr6 46873987 535 + 50890351 I e papAnu2.chr19 47167424 1926 + 51301725 M e macFas5.chr19 55066113 522 + 59248254 I e rheMac3.chr19 60040561 527 + 64156825 I a score=562914.000000 s hg38.chr19_GL949747v2_alt 172693 1483 + 729520 ttt----------tttttttttttgagacgaagtctcgctctgtcacccaagctggagtgcagtggcgcgatcttagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctccccggtagctgggactacaggtgcctgccaccacgcccggcaaattttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcct--gacctggtgatccgcccgccttagcctcccaaagtgctggggtaacaggcatgag--ccatcacgcccggccaatattttcttttctctagcttaattcatcataggaatacagaatataatacatatagcgtataaaatatgtgttaattgactatgttattggtaaggcttccagtcaactacgagtaatgttttttttaa------atcctgagacagtgtcttgctctgccagctgggctggggtgcaggggcatgatcttagttcgctgctgcctcaacctccttgactcaagcagtcctcccaccacagcctcccaagtagctggaactacgggcacacaccaccacacccagtta--------atttttctgttttctgtagagtctgggttttgc-cgtgttgcccaggctgg-------------------------------tcttgaactcctgggctcaagtgctctgcccacctcagcttcccaaatcccacctggggttacaggtgtgagccacggtgcctggcctagtagttaagttttggggaagtcaaaagttatatgcagattttctttcttgatttttttttttttttttttgaggcagtcttgctctgtcgcccaggatggagtgcagtggtgcgatctcggctcactgcaatctccacgtcctgggttcaagcgatgctcttgcctcaacctcctaagtagctgggattacaggcacctgccaccacgcct-gcctaatttttgtatttttagtagagaccaggttttgtcatgttggccaggctggtctcgaactcctgacctcagttgatccgccggccttggccttccacatagtgctgggattacaggcgtgaggcaccgcgcccagcctatatggaggttttcggctgagctgggggtcagtgcccctcgcccccagactgtaca-gagtcagctgTGTTAAGAtattaagcaccttcagtacacaagactctgtgctggttttcttttctttt-ttttttttttttactctaaatcatcaaaccctatgaggaaagtcctgttactttctcccatttagcactcttgaagaggctaatttgcctaagatcaagagctcgtcagtgactgctgaggttcaaacgcagatcttttttaagacttgagaaccTACAGGTTCAACCACCATTATAAAACCATCTCTGTAATCACGAGGCACCCGGAATTTGTGGAGCTTGGACTTCATCCTGAAGGGAGTGAAAACTTATGGA--AGTTTTTTCCTTCCACGTTTCCCCCTTCCAGAT s panTro4.chr19 59105371 1482 + 63644993 ttt----------tttttttttttgagacgaagtctcgctctgtcacccaagctggagtgcagtggcgcgatcttagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctccccagtagttgggactacaggcgcctgccaccacgcccggctaattttttgtatgtttagtagagatggggtttcaccatgttagccaggatggtctcgatctcct--gacctggtgatccgcccgccttagcctcccaaagtgctgggattacaggcatgag--ccatcacgcccggccaatattttcttttctctagcttaattcatcataggaatacagaatataatacatatagcgtataaaatatgtgttaattgactatgttattggtaaggcttccagtcaactacgagtaattttttttttaa------atcctgagacagtgtcttgctctgccagctgggctggggtgcaggggcatgatcttagttcactgctgcctcaacctccttgactcaagcagtcctcccaccacagcctcccaagtagctggaactacgggcacacgccaccacacccagtta--------atttttctgttttctgtagagtctgggttttgc-cgtgttgccctggctgg-------------------------------tcttgaactcctgggctcaagtgctctgcccatctcagcttcccaaatcccacctggggttacaggtgtgagccacggtgcctggcctagtagttaagttttggggaagtcaaaagttatatgcagattttctttctt--tctttctttctttttttttgaggcagtcttgctctgtcgcccaggatggagtgcagtggtgcgatctcggctcactgcaatctccacgtcctgggttcaagcgatgctcttgcctcaacctcctaagtagctgggattacaggcacctgccaccacgcct-gcctaatttttgtatttttagtagagaccaggttttgtcatgttggccaggctggtctcgaactcctgacctcagttgatccgccggcctcggccttccacatagtgctgggattacaggcgtgaggcaccgcgcccagcctatatggaggttttcggctgagctgggggtcagtgcccctcgcccccagactgtaca-gagtcagctgTGTTAAGAtattaagcaccttcagtacacaagactctgtgctggttttcttttcttttcttttttttttttactctaaatcatcaaaccctatgaggaaagtcctgttactttctcccatttagcactcttgaagaggctaatttgcctaagatcaagagctcgtcagtgactgctgaggttcaaacgcagatcttttttaagacttgagaacctacaggttcaaccaccattataAAACCATCTCTGTAATCACCAGGCACCCGGAATTTGTGGAGCTTGGACTTCATCCTGAAGGGAGTGAAAACTTATGGA--AGTTTTTTCCTTCCACGTTTCCCCCTTCCAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55982785 1476 + 60714840 tttgttttttttgtttttttttttgagacggagtctcgctctgtcacccaagctggagtgcagtggtgcaatctcagctcactgcaagctctgcctcctgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcgcctgccaccacgcccggctaattttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcagtctcct--gacctggtgatcagcccgccttagcctcccaaagtgctgggattacaggcatgag--ccactatgcccggccagtattttcttttctctagcttaattcatcataggaatacagaatataatatatacagcgtacaaaatgtgtgttaattgactatgttattggtaaggcttccagtcaactacgagtaatttttttttttattttttatcttgagacggtgtcttgctctgccagctgggctggggtgcaggggcattatcttagttcactgccgcctcaacctccttgactcaagcaatccttccaccacagcctcccaagtagctggaactacgggcacacgccaccacacccagcta--------atttttctgttttctgtagagtctgggtttcgc-catgttgcccaggctgg-------------------------------tcttgaactcctgggctcaagtgctct----------gcttcccaaatcccacctggggttacaggtgtgagccatggtgcctggcctagtagttaagttttggggaagtcaaaagttttatgcagattttctt------ttcttttttttttttttttgaggcagccttgctctgtcgcccaggatggagtgcagtggtacgatctcggctcactgcaacctccacgtcctgggttcaagcgatgctcttgcctcaacctcctgagtagctgggatttcaggtgcttgccaccatgcct-gcctaatttttgtatttttagtagagaccgggttttgccatgttggccaggctggtctcgaactcctgacctcagttgatctgccggccttggccgtccacaaagtgctgggattacaggcgtgaggcaccgcgcccagcctatatggaggttttcggctgagctgggggtcagtgcccctcgcccccagactgtaca-gagtcagctgTGTTAAGAtattaagcaccttcagtacacaaggctctgggctggttttttt--------tttttttttttacttctaaatcatcaaaccctatgaggaagctcctgttgctttctcccatttagcactcttgaagaggctaatctgcctaagatcaagagctcgtcagtgacagctgaggttaaaacgcagatcttttttaagacttgagaaccTACAGGTTCAATCACCATTATAAAACCATCTCTGTAATCACGAGGCACCCGGAATTTGTGGAGCTTGGACTTCATCCTGAAGGGAGTGAAAACTTACGGA--AGTTTTTTCCTTCCACGTTTCCCCCTTCCAGAT i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45459104 1346 + 49145316 ttt----------tttttctctctgagacagtgcctcgctctgccacctgggctggggtgcagtggcataatcttggttcactgcagcctcaacctctttggctcaagcagtcttcccacttcagcctcccaagtagctggaactatgggcgcatggcaccacatccagctaatttttc-tgttttctgtagagatgcggttttgccatgttgcccaggctggtctctaatttctaggttcaagtgatctacccacctcagcttcacaaagtgctgggatttcaggtgtgaaatccaccattcctggcc----------------------------------------------tagta---------------------gttaa--------gtt-ttggggaagtcaaaagttacatgcagattttcttttttgtcg------ttgttgaggaa--gtcttgctctgtcacccaggctggagtgcagtggcatgatcttggctcaccgcaacttctgcctcgcgggttcaactgattctcctgtctcagtctcctgagtagctgggattaccggcgcctgcctccatgcctggctaattcttgtattttttttcttttttttgagacggacttttgctcttattacccagactggagtgcaatggtgcgatctaggctcaccacaatctccgccttctgggttcaggcaattctcctgcctcagcctcccgagt---agctgggactacaggcacacaccaccatgcccagctaa---------------------------------------------------tttttatatttttagtagagacggggtttcaccatgttgaccaggatgg-------------------------------tcttgatctcttgacctc--gtgatctacccgcctcggcctcccaaagtgctgggattataggcgtgagccaccgcacccggcctgatttttgtatttttagtagagacggggtcttaccatgttggtcaggctgttctggaactcctgacctcatttgatttgcctgcctcggcctcctacaaagtgctgagattacaggtgtgagccacctcgcccggcctatatggaggttttcagctgagctggagatcaatgctcccagccccctcattggacaggagtcagctg--------GAGGAagcaccttcagtgtgcagggctctggtctgcttttcttttct----ttctttttttttactctaaatcatcaaaccctgtgaggaaagtcctgttacatgctcccacttagcactcttgaagaggctaatttgcctaagattaagagctggccagtgacagctgaggttcaaacaca----tttttt--gacttgagaacctacaggcttagccaccattataAAACCATCTC--TAATCATGAGGCACCTGGAATGTGTGGCGCTTGGACTTCATCCTGAAGGGAGTGAAAAGTTATGGAAGAGTTTTTTCCTCTCATGTTTTCCCCTTCCTGAT i calJac3.chr22 I 429 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e nomLeu3.chr10 102751356 3534 - 106955855 I e chlSab2.chr6 46873987 535 + 50890351 I e papAnu2.chr19 47167424 1926 + 51301725 M e macFas5.chr19 55066113 522 + 59248254 I e rheMac3.chr19 60040561 527 + 64156825 I a score=94504.000000 s hg38.chr19_GL949747v2_alt 174176 57 + 729520 GAATAATAT-ACGCGTGTTCAAGATACAAAAATGCATAAAATTTggccaggcatggtg s panTro4.chr19 59106853 57 + 63644993 GAATAATAT-ACGCGTGTTCAAGATACAAAAATGCATAAAATTTggccaggcatggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55984261 57 + 60714840 GAGTAATAT-ACGCGTGTTCAAGATATAAAAATGCATAAAATTTggccgggcatggtg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60041088 57 + 64156825 gaataatat-ACGCATGTTCAGGATACAAAAATATATAAAATTTggccgggcatggtg i rheMac3.chr19 I 527 C 0 s macFas5.chr19 55066635 57 + 59248254 gaataatat-ACGCATGTTCAGGATACAAAAATATATAAAATTTggccgggcatggtg i macFas5.chr19 I 522 C 0 s chlSab2.chr6 46874522 57 + 50890351 gaataatat-ACGCGTGTTCAAGATACaaaaatgcgtaaaatttggccgggcatggtg i chlSab2.chr6 I 535 C 0 s calJac3.chr22 45460450 58 + 49145316 GAAAAATGTAAAGCGTGTTCAAGATAAAAAAATGCATAAAATTTGGCCGGGCTCAGTG i calJac3.chr22 C 0 I 15 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e nomLeu3.chr10 102751356 3534 - 106955855 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=743525.000000 s hg38.chr19_GL949747v2_alt 174233 605 + 729520 gcttacacctgtaatcccagcacttggggaggctgaggcgagtggatcacttgagcccaggagttcaagaccagcctgggcaatatggcaaaaccccgtctcaaaacaacaaaacaaaCAAACAAAAAACCCATAAAACTGAACAAGGTAGTTTGTAAGATATGGAAGTACAATGCAGATGACAATAATGACGATGGTAGCTACCactaggcgctttatttatgc----cactctcctcaacactggatagactctcacttaatcctcac----aagcttatgaggtaggcgctaccatcattcgccgttttacagaggaggacgctgaggcacagagtgattgagaaacttgtcgaaggcactgcagctggcaagtggtgacgtggcatttgaatccaggcatccggATGGTGTGGATGCCGTGGAAGAGAAAGGGGCGGGTGGGACTGCTTCCTGAGGAGATAGTGACTGCCGAGGCAGCAGCGTAGGGAAGACAACTGAAGAACACGAGCT---GTGGAGACAGACCATCGCATTCGGAGTGgagagatgggtgtacagacagacaataaccagactatatataaaaagagaactctAggtcaggcgcggtgg s panTro4.chr19 59106910 609 + 63644993 gcttacacctgtaatcccagcacttggggaggctgaggcgagtggatcacttgagcccaggagttcaagaccagcctgggcaatatggcaaaaccccgtctcaaaacaacaaaacaaaCAAACAAAAAACCCATAAAACTGAACAAGGTAGTTTGTAAGATATGGAAGTACAATGCAGATGACAATAATGACGATGGTAGCTACCactaggcgctttatttatgccagacactctcctcaacactggatagactctcacttaatcctcac----aagcttatgaggtaggcactaccatcattcgccgttttacagaggaggacgctgaggcacagagtgattgagaaacttgtcgaaggcactgcagctggcaagtggtgacgtggcatttgaatccaggcatccggATGGTGTGGATGCCGTGGAAGAGAAAGGGGCGGGTGGGACTGCTTCCTGAGGAGATAGTGACTGCCGAGGCAGCAGCGTAGGGAAGACAACTGAAGAACACGAGCT---GTGGAGACAGACCATCGCATTCGGAGTGgagagatgggtgtacagacagacaataaccagactatatataaaaagagaactctAGGTCACgcgcggtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55984318 596 + 60714840 gctcacacctgtaatcccagcacttggggaggctgaggcgagtggatcacttgagcccaggagttcaagaccagcctgggcaatatggcaaaaccccgtctcaaaataaca----aaacaaaCAAAAAACCCTTAAAACTGAACAAGGTAGTTTGTAAGATATGGAAATACAATGCAGATGGCGATAATGACGatggtagctaacactaggccc----tttatgccagaca--ctcctaaacactggatagactctcacttaatcctcac----aagcttatgaggtgggcactaccatcattccccgttttacagaggaggacgctgaggcac--agtgattgagaaacttgtcgaaggcactgcagctggcaagtggtgacgtggcatttgaatccaggcatccggATGGTGTGGATGCCGTGGAAGAGAAAGGGACGGGTGGGACTGC-TCCTGAGGAGATACTGACTGCCGAGGCAGCAGCGTAGGGAAGACAACTGAAGAACACGAGCT---GTGGAGACAGACCATCGCATTCGGAGTGgagagatgggtgtacagacagacaataaccagactatatacaaaaagagaactctAggtcaggcgcggtgg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60041145 602 + 64156825 gctcacacctgtaatcccagcacttggggaggctgaggcgagtggatcacttgagtccaggagttcaagaccagcctgggcaacatggcaaaaccccatttcaaaac--------aaacaaaacaaaaCCCCATAAAACTGAACAAGGTAGTTTGTAAGATATGGAAGTACAATGCAGATGACAATAATGACGatgatagctaacactaggcgctttatttacgccagacactttcctaaacactggatagactctcacttaagcctcacaaataagcctctgaggtaggcactaccatccttccccgttttacagaggaggacgctgaggcacagattgattgagaaacttgtcgaaggcactgcaactagcaagtggtgacatggcgtttgaatccaggcaTCCGAATGGTGTGGATGCGGTGGAAGAGAAAGGGGTGGGTAGGACAGCTTCCTGAGGGGATACTGA-TGCCGAGGCAGCAGCGTAGGGAAGAGAACTGAAGAACAGGAGCT---GTGGAGACAGATCATCGCATCCGGTGTGGACAGAtgggtatgcaagcggacaataaccagactatatataaaaagagaa--ctAggtcaggcgcggtgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55066692 599 + 59248254 gctcacacctgtaatcccagcacttggggaggctgaggcgagtggatcacttgagtccaggagttcaagaccagcccgggcaacatggcaaaaccccgtctca------------aaataaaacaaaaCCCCATAAAACTGAACAAGGTAGTTTGTAAGATATGGAAGTACAATGCAGATGACAATAATGACGatgatagctaacactaggcgctttatttacgccagacactttcctaaacactggatagactctcacttaagcctcacaaataagcctctgaggtaggcactaccatccttccccgttttacagaggaggacgctgaggcacagattgattgagaaacttgtcgaaggcactgcaactagcaagtggtgacatggcgtttgaatccaggcaTCCGAATGGTGTGGATGCGGTGGAAGAGAAAGGGGTGGGTAGGACAGCTTCCTGAGGGGATACTGACTGCCGAGGCAGCAGCGTAGGGAAGAGAACTGAAGAACAGGAGCT---GTGGAGACAGATCATCGCATCCGGTGTGGACAGATGGGTATGCAAGCAGACAATAACCAGACTATATATAAAAAGAGAA--CTAggtcaggctcggtgg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46874579 602 + 50890351 gctcacacctgtaatcccagcacttggggaggctgaggcgagtggatcacttgagtccaggagttcaagaccagcctgggcaatatggcaaaaccccgtcttaaaac--------aaacaaaacaaaaCCCCATAAAACTGAACAAGGTAGTTTGTAAGATATGGAAGTACAATGCAGATGACAATAATGACGatgatagctaacactaggcgctttatttacactagacactttcctaaacactggacagactctc----aatcctcacaaataagcctatgaggtaggcactaccatcattccccgttttacagaggaggacgctgaggcacagattgattgagaaacttgtcgaaggcactgcaactagcaagtggtgacatggcgtttgaatccaggcaTCCGAATGGTGTGGATGCGGTGGAAGAGAAAGGGGTGGGTAGGACTGCTTCCTGAGGAGATACTGACTGCCGAGGCAGCAGCGTAGGGAAGAGAACTGAAGAACAGGAGCTATGGTGGAGACAGACCATTGCATCCGGTGTGGACAGAtgggtacacaaacggacaataaccagactatatataaaaagagaa--ctAggtcaggcgcggtgg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e calJac3.chr22 45460508 15 + 49145316 I e nomLeu3.chr10 102751356 3534 - 106955855 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=74016.000000 s hg38.chr19_GL949747v2_alt 174838 43 + 729520 ctcacacctgtaatcttagcactttgggaggctgaggcgggtg s panTro4.chr19 59107519 43 + 63644993 ctcacacctgtaatcctagcactttgggaggctgaggcgggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55984914 43 + 60714840 ctcacacctgtaatcctagcactttgggaggctgaggcgggtg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60041747 43 + 64156825 ttcacacctgtaatcccagcactttaggaggctgaggcgggtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55067291 43 + 59248254 ttcacacctgtaatcccagcactttaggaggctgaggcgggtg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46875181 43 + 50890351 ttcacacctgtaatcccagcactttaggaggctgaggtgggtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45460523 40 + 49145316 ctcacacctgtaatccctgcactttgggaggccgaggcgg--- i calJac3.chr22 I 15 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e nomLeu3.chr10 102751356 3534 - 106955855 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=474825.000000 s hg38.chr19_GL949747v2_alt 174881 227 + 729520 gatcacttgaggtcaggcgttggagaccaggagttcaaaaccccgtctctac-taaaaatttaaaaattagccgggcatggtggtgggcgcctgtagtcccagcttctcgggaggctgaggcacgagaatcgattgaacccgggaagcggaggttgcagtgagccgagatcgcac-cactgcactccagcctgggtgacgagagcgaaaaactccgtctcaaaaataaa s panTro4.chr19 59107562 227 + 63644993 gatcacttgaggtcaggcgttggagaccaggagttcaaaaccccgtctctac-taaaaatataaaaattagccgggcatggtggtgggcgcctgtagtcccagcttctcgggaggctgaggcacgagaatcgattgaacccgggaagcggaggttgcagtgagccgagatcgcac-cactgcactccagcctgggtgacaagagcgaaaaactccgtctcaaaaataaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55984957 219 + 60714840 gatcacttgaagtcaggcgtttgagaccaggagttcaaaaccccgtctct-------aatataaaaattagctgggcatggtggtgggcacctgtagtcccagcttctggggaggctgaggcacgagaatcgattcaacctgggaagccgaggttgcagtgagccgagatcgcac-cactgcactccagcctgggtgacaagagcg--aaactccgtctcaaaaataaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60041790 217 + 64156825 gatcacctgaagtcaggcgtttgagaccgggcgttcgaaaccccgtctctac-taaaaacataaaaattagccgggcatggtggtgggcgcctgtagtcccagctactcgg--------ggcacgagaaccgattgaaccggggaagcagaggttgcaatgagccgagatcgcgc-cactgcactccagcctgggtgacaagagcg--aaactccatctcaaaaataaa i rheMac3.chr19 C 0 I 5 s macFas5.chr19 55067334 217 + 59248254 gatcacctgaagtcaggcgtttgagaccgggcgttcgaaaccccgtctctac-taaaaacataaaaattagccgggcatggtggtgggcgcctgtagtcccagctactcgg--------ggcacgagaaccgattgaacccgggaagcagaggttgcaatgagccgagatcgcgc-cactgcactccagcctgggtgacaagagcg--aaactccatctcaaaaataaa i macFas5.chr19 C 0 I 5 s papAnu2.chr19 47169350 218 + 51301725 gatcacttgaagtcaggcgtttgagaccggGCGttcgaaaccccgtctctacttaaaaacataaaaattagccgggcatggtggtgggcgcctgtagtgccagctactcgg--------ggcacgagaatcgattgaacccgggaagcagagcttgcagtgagccgagatcgcgc-cactgcactccagcctgggtgacaagaggg--aaactccgtctcaaaaataaa i papAnu2.chr19 M 1926 I 5 s chlSab2.chr6 46875224 217 + 50890351 gatcacttgaagtcaggagtttgagaccgggcattcgaaaccctgtctctac-taaaaacataaaaattagccgggcatggtggtgggcacctgtagtcccagctactcgg--------ggcacgagaatctattgaacccgggaagcagaggttgcagtgaaccgagatcgcgc-cactgcactccagcctgggtgacaagagcg--aaactccgtctcaaaaataaa i chlSab2.chr6 C 0 T 10752 s calJac3.chr22 45460563 223 + 49145316 -atcacttgaggtctggagtttgagaccaggagttcgaaaccccgtttctac-taaaaatacaaaaattagcctggcatggtggtgggcgcccatagtcctagttactcgtgaggctgaggcatgaaagtcgattgaaccagggagtcgaaggctgcggtgagctgtgatctcgcgcactgtactccagcctgggtgac--gagtg--aaactccatttcaaaaataaa i calJac3.chr22 C 0 I 5 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e nomLeu3.chr10 102751356 3534 - 106955855 I a score=28651.000000 s hg38.chr19_GL949747v2_alt 175108 12 + 729520 ataaaTTACTGA s panTro4.chr19 59107789 12 + 63644993 ataaaTTACTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55985176 12 + 60714840 ataaaTTACTGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60042012 12 + 64156825 ataaaTTACTGA i rheMac3.chr19 I 5 C 0 s macFas5.chr19 55067556 12 + 59248254 ataaaTTACTGA i macFas5.chr19 I 5 C 0 s papAnu2.chr19 47169573 12 + 51301725 ataaattagtga i papAnu2.chr19 I 5 C 0 s chlSab2.chr6 46864689 12 + 50890351 aTAAATTACTGA i chlSab2.chr6 T 10752 C 0 s calJac3.chr22 45460791 12 + 49145316 gtaaaTTACTGA i calJac3.chr22 I 5 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e nomLeu3.chr10 102751356 3534 - 106955855 I a score=1504910.000000 s hg38.chr19_GL949747v2_alt 175120 560 + 729520 TAATAGTACTAATACCCCTTAAGTGGCTAT-TGATAATAATAGTACCAT---GGGTGGGGGGGCAACTTCTCTGAGAGTGCTCTG-----TAAGTAtgtattgaagattgagtaaatacatttaaaattcttagaacagtatgtggcacat----agcgttccagaatgccacattattgttAGTGACAGAAATAATCTCggctgggcgcggtggctcacgcctgtaatcccagcacttt--gggggggccacggcgggaggctctctcgaggccgggagttcaagaccagcctgggcaacatggcaagacgccgactgtt----a---aaaaaaaaaaaatgctacccgggcgtcg---tggcgtgtgcctgtaatcccagctactggggaggaggtgggaggatcgctcgagcccgagaggttggtcggggcctcagtgagccgaaatcacgccactgcactccagcctgggcgacggagcgagaccctg--tctcagaaagaaaaaga-aaaaCCACCGTCCAGGGGCGGAGAAGGAAGGTTCTCCCTACTTCTCAGGTTTCCACTCCCTGGCCGGAAAAAACCT s panTro4.chr19 59107801 565 + 63644993 TAATAATACTAATACCCCTTAAGTGGCTAT-TGATAATAATAGTACCAT--GGGGGGGGGGGGCAACTGCTCTGAGAGtgctctg-----taagtatgtattgaagattgagtaaatacatttaaaattcttagaacagtatgtggcacat----agcgttccagaatgccacattattgttAGTGACAGAAATAATCTCggctgggcgcggtggctcacgcctgtaatcccagcacttt--gggggggccacggcgggaggctctctcgaggccaggagttcaagaccagcctgggcaacatggcaagacgccgactgttaaaaa---aaaaaaaaaaaaagctacccgggcgtcg---tggcgtgtgcatgtaatcccagctactggggaggaggtgggaggatcgctcgagcccgagaggttggtcggggccgcagtgagccgaaatcacaccactgcactccagcctgggcgacagagcgagaccctg--tctcagaaagaaaaaga-aaaaCCACCGTCCAGGGGCGGAGAAGGAAGGTTCTCCCTACTTCTCAGGTTTCCACTCCCTGGCCGGAAAAAACCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55985188 559 + 60714840 TAATAGTATTAATACCCCTTAAGTGGGTAT-TG---GTAATAGTACCGT--GGGGCGGGGGGCCAACTTCTCTGAGAGtgctccg-----taagtatgtattgaagattgagtaaatacatttaaaattcttacaacagtaggtggcacatagaaagcgttccagaatgccacattattgttAGTGACAGAAATAATCTCggctgggcgcggtggctcacgtctgtaatcccagcacttt---ggggggccaaggcgggaggctctctcgaggccaggagttcaagaccagcctgggcaacatggcaagacgccgactgtt---------aaaaaaaaaaatgttacccgggcgtcg---tagcgtgtgcctgtaattccagctactggggaggaggtgggacgatcgctcgagcccgagaggttggtcggggctgcagtaagccgaaatcacgccactgcactccagcctgggcgacagagcgagaccctg--tctcagaaagaaagaga-aaaaCCACCGTCCAAGGGCGGAGAAGGAAGGTTCTCCCTGCTTCTCAGGTTTCCACTCCTTGGCCGGAAAAAGCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102754890 553 - 106955855 TAATAGTATTCATACCCTTTAAGTGGGTAT-TG---GTAATAGTACCAT-GGGGGGGGGGGGGCAACTTCTCTGAGAGtgctccg-----taagtatgtattgaagattgagtaaatacatttaaaattcttagaacagtatgtggcacatagaaagcgttccagaatgccacattattgttAGTGAC--AAATAATCTCggctgggcgcggtggctcatgcctgtaatcccagcacttt---ggggggccacggcgggaggctctctcgaggccaggagttcaaggacagcctgggaaacatggcaagacgccgactgtt-----------aaaaaaaaaagttacccgggcgtcg---tggcgtgtgcctgtaatcccagctactggggaggaggtgggaggatcgctcgagcccgagaggttggtcggggctgcagtgagccgaaatcacgccactgcactccagcctgggcgacagagcgagaccctg--tctcagaaagaaagaga-aaaaCCACCGTCCAGCGGCGGAGAAGGAAGGTTCTCCCTA---CTCAGGTTTCCACTCCCTGGCCGGAAAAAACCT i nomLeu3.chr10 I 3534 C 0 s rheMac3.chr19 60042024 561 + 64156825 TAATAGTATTAATACTCCTTAAGTGGGTAT-TG---ATAATAGTACCCT-----GGGGGAGGGCAACTTCTCCGAGAGtgctcca-----taagtatgtattgaagattgagtaaatacttttaaaattcttagaacagtatgtggcacatagaaagcgttccataatgccacattattgtCAGTGACAGAAATAACCTCggctgggcgcggtggctcacgcctgtaattccagcacttt---ggggggccaaggtgggaggctctcgcgaggccaggagttcaagaccagactgggcaacatggcaagacgccgattgtacca-----aaaaaaaaaaaaagttacccgggc-tcg---tggcgtgtgcttgtaatcccatctactggggaggaggtgggaggatcgctcaagcccgagaggttggtcggggcagcagtgaaccgagatcacaacactgcactccagcttgggctacagagcgagaccctgattctcagaaagaaagaga-aaTACCACCGTCCAGGGACGGAGAAGGATGATTCTCCCCGCTTCTCAGGTTTCTATTCCTTGCCCGGAAGAAACCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55067568 548 + 59248254 TAATAGTATTAATACTCCTTAAGTGGGTAT-TG---ATAATAGTACCAT-----GGGGGAGGGCAACTTCTCCGAGAGtgctcca-----taagtatgtattgaagattgagtaaatacttttaaaattcttagaacagtatgtggcacatagaaagcgttccataaTGCCACATTATTGTCAGTGACAGAAATAACCTCggctgggcgcggtggctcacgcctgtaattccagcacttt---ggggggccaaggtgggaggctctcgcgaggccaggagttcaagaccagactgggcaacatggcaagacgccgattgtacc------aaaaaaaaaaaaagttacccgggc-ttg---tggcgtgtgcttgtaatcccagctactggggaggaggtgggaggatcgctcaagcc------------cggggcagcagtgaaccgagatcacaacactgcactccagcttgggctacagagcgagaccctgattctcagaaagaaagaga-aaTACCACCGTCCAGGGACGGAGAAGGATGATTCTCCCCGCTTCTCAGGTTTCTACTCCTTGCCCGGAAGAAACCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47169585 552 + 51301725 taATAGTACTAATACTCCTTAAGTGGGTAT-TG---ATAATAGTACCAT-----GGGGGAGGGCAACTTCTCCGAGAGTGCTCCA-----TAAGTATGTATTGAAGATTGAGTAAGTACATTTAAAATTCTTAGAACAGTATGTGGCACATAGAAAGCGTTCCATAATGCCACATTATTGTCAGTGACAGAAATAacctcggctgggcgcggtggctcacgcctgtaatcccagcacttt---ggggggccaaggcaggaggctctcgcgaggccaggagttcaagaccagactgggcaacatggcaagacgcCGActgtaccaaaaagaaaaaaaaaaaaagttacccgGGC-TCG---TGGCgtgtacttgtaatcccagctactggggaggaggtgggaggatcgctcaagCCCGAGAGGTTGGTCGGGGcagcagtgaaccgagatcacaacactgcactccagcttgggctacagagcgagaccctg--tctcagaaagaaagaga-aataccaCCGTCCAGGGACGGAGAAGGATGATTCTCCCCGCTTC------------TCCTTGCACGGAAGAAACCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46864701 557 + 50890351 TAATAGTATTAATACTCCTTAAGTGGGTAT-TG---ATAATAGTACCAT-----GGGGGAGGGCAACTTCTCCGAGAGTGCTCCA---------TAtgtattgaagattgagtaaatacatttaaaattcttagaacagtatgtggcacatagaaagcgttccataatgccacattattgtCAGTGACAGAAATAATCTCggctgggcgcggtggctcacgcctgtaatcccagcacttt---ggggggccaaagcgggaggctctctcgaggccaggagttcaagaccagactgggcaacatggcaagacgctgactgtaccaaa---agaaaaaaaaaaagttacccgggc-tcg---tggcgtgtgcttgtaatcacagctactggggaggaggtgggaggatcgctcaagccggagaggttcgtcggggcagcagtgaaccgagatcacaacactgcactccagcttgggctacagagcgagaccctg--tctcagaaagaaagaga-aaTACCACCGTCCAGGGACGGAGAAGGATGATTCTCCCCGCTTCTCAGGTTTCCACTCCTTGCACAGAAGAAACCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45460803 564 + 49145316 TAATGCTATTAATATTTCTTAAGCGAGAATCTC---ATAATAGTACCCTTTGGTGAGGGGGGGCACCTTCTCTGAAAGTGCTCCGTAACATAAGTATATACTGAGGATTGAGTAAATCCATTTAAAATTCTT-----AGTATGTGTCACAC----AGCGTTCCAGAATGCCACATGATTGTTCGTGACAGAAATAATCTCggctgggcgcggtggcacacgcctgtgatctcagcactttggggggggaccaaggcggaaggacctctcgaggccaggagttcgagaccagcctggacaacgtagcaagacgccgactgt---------acaggaaaaaaaagttacccgcgc-gcgcgctggcgtgtacctttaatcccatctactccggaggaagtgggaggatcgctcgagcccgagaggttggtcggggctgcagtgagcagagatcatgcaactgcaccccggcttgggcgacagagggagaccttg--tctcaaaaagcaaaagaggaaaCCACAGTCCAGGGATGGAGAAGGAAGGTTCTCCGCACTTGTCAAGTTTCCACTCCTTAGCCGGAAGAAAGCT i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I a score=48771.000000 s hg38.chr19_GL949747v2_alt 175680 15 + 729520 AGTCCTCCCAGGTTA s panTro4.chr19 59108366 15 + 63644993 AGTCCTCCCAGGTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55985747 15 + 60714840 AGTCCTCCCAGGTTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102755443 15 - 106955855 AGTCCTCCCAGGTTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60042585 15 + 64156825 AGTCCTCCGAGGTTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55068116 15 + 59248254 AGTCCTCCCAGGTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47170137 15 + 51301725 AGTCCTCCCAGGTTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46865258 15 + 50890351 AGTCCTCCCAGGTTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45461367 15 + 49145316 AGTCATCCCAGTTCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3703894 15 + 145441459 AGTCGGCCCAGCGAA i mm10.chr7 I 2697 C 0 e canFam3.chr1 19659152 64854 - 122678785 I a score=645206.000000 s hg38.chr19_GL949747v2_alt 175695 192 + 729520 GCACGCCGCTCTAGCCCAGCCTCACGTCTCCACTGCTTCT--CAGCCAGCCAACGCCTCTTCTGATTGGCTCTGACGTGCGTGGTGCGTGAAAACGTCACGAGACGCCGGCGTTACTATAAGAGCGCAGCCGTGGCGCTTGCGCGCCTCTTTCTCAGTGACCGGGTGGTTTGCTTA-GGTGAGGTGCGGCGG-TGT s panTro4.chr19 59108381 192 + 63644993 GCACGCCGCTCTAGCCCAGCCTCACGTCTCCACTGCTTCT--CAGCCAGCCAACGCCTCTTCTGATTGGCTCTGACGTGCGTGGTGCGTGATAACGTCACGAGACGCCGGCGTTACTATAAGAGCGCAGCCGTGGCGCTTGCGCGCCTCTTTCTCAGTGACCGGCTGGTTTGCTCA-GGTGAGGTGCGGTGG-TGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55985762 192 + 60714840 GCACGCCGCTCTAGCCCAGCCTCACGTCTCCACTGCTTCT--CAGCCAGCCAACGCCTCTTCTGATTGGCTCTGACGTGCGTGGTGCGTGATAACGTCACGAGGCGCCGGCGTTACTATAAGAGCGCAGCCGTGTCACTTGCGCGCCTCTTTCTCAGGGACCGGGTTATGCGTTCA-GGTGAGGTGTAGTGG-TGT i ponAbe2.chr19 C 0 I 8 s nomLeu3.chr10 102755458 192 - 106955855 GCACGCCGCTCTAGCCCAGCCTCACGTCTCCACTGCTTCC--CAGCCAGCCAACGCCTCTTCTGATTGGCTCTGACGTGCATGGTGCGTGATAACGTCACGAGGCGCCAGCGTTACTATAAAAGCGCAGCCGTGCCGGTTACGCGCCTCTTTCTCAGCGACCGGGTCTTTCGCTCA-GGTGAGGTGCGGTGG-TGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60042600 192 + 64156825 GCACGCCGCTCTAGCCCAGCCTCACGTCTCTACTGCTGCT--CAGCCAGCCAACGCCTCTTCTGATTGGCTCAGACGTGCCTGGTGCGTGATGACGTCACGAGGCGCCGGCGTTACTATAAGAGCGTAGCCTTGTCGCCGGCGCGCCTCTTCGTCAGTGGCCGGCTCTTGCGCTCA-GGTGAGATGTGGTGA-TAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55068131 192 + 59248254 GCACGCCGCTCTAGCCCAGCCTCACGTCTCTACTGCTGCT--CAGCCAGCCAACGCCTCTTCTGATTGGCTCAGACGTGCCTGGTGCGTGATGACGTCACGAGGCGCCGGCGTTACTATAAGAGCGTAGCCTTGTCGGTGGCGCGCCTCTTCGTCAGTGGCCGGCTCTTGCGTTCA-GGTGAGGTGTGGTGA-TGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47170152 192 + 51301725 GCACGCCGCTCTAGCCCAGCCTCACGTCTCTACTGCTTCT--CAGCCAGCCAACGCCTCTTCTGATTGGCTCAGACGTGCCTGGTGCGTGATGACGTCACGACGCGCCGGCGTTACTATAAGAGCGTAGCCCGGTCGCTTGCGCGCCTCTTTGTCAGTGGCCGGGTCTTGCGCTTA-GGTAAGATGTGGTGA-TGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46865273 192 + 50890351 GTACGCCGCTCTAGCCCAGCCTCACGTCTCTACTGCTTCT--TAGCCAGTCAACGCCTCTTCTGATTGGCTCAGACGTGCCTGGTGCGTGATGACGTCACGAGGCGCCGGCGTTACTATAAGAGCGCAGCCTGGTCGCTTGCGCGCCTCTTTGTCAGTGGCCGGGTCTTTCGCTTA-GGTAAGTTGTGGTGA-TGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45461382 192 + 49145316 GCACGCCGCTCTAGCCCAGACTCACATCTCGACTGCTTCT--CCGCCAGCCAACGCCTCCTCTGATTGGCTCAGACGTGCGTTGTGCGTGATAAGGTCACGAGGCGCTGGCGTTACTATAAGAGCGCAGCTGTGTCGCGTGCGCGTCTTTTTCTCAGTGTCCGGGCCCCGTACTTA-GGTGAGGTGTGGTGA-TGT i calJac3.chr22 C 0 C 0 s mm10.chr7 3703909 172 + 145441459 G--CGCCGCTCTAGCCGGCCTGCTCGTCTCTATGGCTTTC--CTG-------------CTTCTGATTGGCGTAGTCGCGAGCGGTGCGTGATGACGTCACTACAAGGCGACGTTACTATAAGACCTCGGTCCAACCGCCT-TGTCTCTCTTTGTCTCGGGCCTGA----GTTCGTA-GGTGAG-TGTTCTGATTGT i mm10.chr7 C 0 I 3 s canFam3.chr1 102989285 186 + 122678785 GCTCGTCGCTCTGGCCCAACCTCTCGTCTCGAATGCTTTTTCCCGTCCGCCTACGCCTCTTCTGATTGGTGCAGATGTGCGGCGTGCGCGCTGACGTCACCAGGCCGCGGCGTTGCTATAAAAGCGTGCTCGGG--GGCCGCGTGCTTCTCTTTCTCCGGTCTGG----GAGCTCACGGTAAGGAGTAGTGT---- i canFam3.chr1 n 64854 C 0 a score=28137.000000 s hg38.chr19_GL949747v2_alt 175887 15 + 729520 GCTTTTTCTCTAGGG- s panTro4.chr19 59108573 15 + 63644993 GCTTTTTCTCTAGGG- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102755650 15 - 106955855 GCTTTTTCGCTAGGG- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60042792 15 + 64156825 ACTTTTTCGCTAGGG- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55068323 15 + 59248254 CCTTTTTCGCTAGGG- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47170344 15 + 51301725 CCTTTTTCGCTAGGG- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46865465 15 + 50890351 GCTTTTTCGTTAGGG- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45461574 15 + 49145316 GCTTTGTGGCTAGGG- i calJac3.chr22 C 0 C 0 s mm10.chr7 3704084 15 + 145441459 GTTCGCCTTTTAGGG- i mm10.chr7 I 3 I 1 s canFam3.chr1 102989471 15 + 122678785 -GTTGTGCCCGCGGGT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55985954 8 + 60714840 I a score=1386271.000000 s hg38.chr19_GL949747v2_alt 175902 423 + 729520 -----TTTGGGTTGGATGGTGGCCCGGGCCTTCCGAGTTTCCATGAGTAAGCTAAAGACGTTAGGAAACAGAGC-AGGGTGGTTGAACGGGAGTGCAGCACGGTTGTGGGGGCAGATACTGACTATGAGAGCGTTGGAGGTTATTCTCGCGAGATCGGATCTGGGCTCCGCGAGGTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGTTTGG--AGCC-CTTACGCTCACACTTCTCTCCCGCGCAGGCGCAGACGGGGAAGCGG----AGCCAACATGCCAGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTATGTGACCCCGCGGAGACCCTTCGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCCGGGAAGTGGTTCGGCTTCCG---GGAGGCGGTTAGCACGTGGATGA s panTro4.chr19 59108588 417 + 63644993 -----TTTGGGTTGGATGGTGGCCCGGGCCTTCCGAGTTTCCATGAGTAAGCTAAAGACGTTAGGAAACAGAGC-AGGGTGGTTGAACGGGAGTGCAGCACGGTTGTGGGGGCAGATACTGACTATGAGAGCGTTGGAGGTTATTCTCGCGAGATCGGATCTGGGCTCTGCGAGGTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGTCTGG--AGCC-CTTACG------CTTCTCTCCCGCGCAGGCGCAGACGGGGAAGCGG----AGCCAACATGCCAGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTATGTGACCCCGCGGAGACCCTTCGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCCGGGAAGTGGTTCGGCTTCCG---GGAGGCGGTTAGCACGTGGATGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55985962 423 + 60714840 -----TTTGGGTTGGATGGTGGCCTGGGCCTTCCGAGTTTCCATGAGTAACCTGAAGACGTTAGGGAACAGAGC-AGGGTGGTTGAACGGGAGTGCAGCACGGTTTTGGGGGCTGATACTGACTGTGAGAGCGTTGGAGGTTATTCTCGCGAGATCCGATCTGGGCGCCGCGAGTTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGCCTGG--AGCC-CTTACGCTTATGCTTCTCTCCCGCGCAGGCGCAGACGGGGAAGCGG----AGCCAACATGCCGGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTATGTGACCCCGCGGAGACCCTTCGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCCGGGAAGTGGTTCGGCTTCCG---GGAGGCGGTTAGCACGTGGATGA i ponAbe2.chr19 I 8 C 0 s nomLeu3.chr10 102755665 422 - 106955855 -----TTTGGGCCGGATGGTGGCCTGGGCCTTCCGAGGTTCCATGAGTAAGCTAAAGACGTTAGGGGTGAGAGC-AGGGTGGTTGAACGGGAGTGCGGCACGGTTGTGGGGGCGGATACTGACTATGAGACCATTGGAGGTTATTCTCGCGAGATTCTATCTGGACGCCGCGAGGTTTTGGCGTAGTTTTGGGACTGCGCAGGCGCTGCTTGG--GGCT-CTTA-ACTCACGCTTCTCTCCCGCGCAGGCGCAGACGGGGAAGCGG----AGCCAATATGCCAGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTATGTGACCCCGCGGAGACCCTTCGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCCGAGAAGTGGTTCGGCTTCCG---GGAGGCGGTTAGCACGTGAATGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60042807 426 + 64156825 -----TTTGGGTTGGATGGTCGCGCGGGCCTTCCGAGCTTCCATGAGTAAGCTAAAGGCGTTAGGGATTGGAGT-AGGGTGGTTGAACGGGAGTGCAGCACAGTAGTGGGGGCGGATACTGGCGATGAGAGCTTTGGAGGTTATTCTCGCGAGATCCAATCCGGGCGCCGCAAGGTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGCCCGG--AGCT-CTTAGGCTCACGCTTCCCTCCCGGGCAGGCGCAGACGGGTAAGCGG----AGCCAACATGCCGGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTACGTGACCCCGAGGAGACCCTTTGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCTGGGAAGTGGTGCGGCTTCCGGGAGGAGGCGGGTAGCACGTGGATGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55068338 426 + 59248254 -----TTTGGGTTGGATGGTCGCGCGGGCCTTCCGAGCTTCCATGAGTAAGCTAAAGGCGTTAGGGATTGGAGT-AGGGTGGTTGAACGGGAGTGCAGCACAGTAGTGGGGGCGGATACTGGCGATGAGAGCTTTGGAGGTTATTCTCGCGAGATCCAATCCGGGCGCCGCAAGGTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGTCCGG--AGCT-CTTAGGCTCACGCTTCCCTCCCGGGCAGGCGCAGACGGGTAAGCGG----AGCCAACATGCCGGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTACGTGACCCCGCGGAGACCCTTTGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTTTGGGAAGTGGTGCGGCTTCCGGGAGGAGGCGGGTAGCACGTGGATGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47170359 426 + 51301725 -----TTTGGGTTGGATGGTCACGCGGGCCTTCCAAGCTTCCATGAGTAAGCTAAAGGCGTTAGGGATTGGAGT-AGGGTGGTTGAACGGGAGTACAACACGGTAGTGGGGGAGGATACTGGCGGTGAGAGCTTTGGAGGTTATTCTCGCGAGATCCAGTCCGGGCGCCGCAAGGTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGCCCGG--AGCT-CTTAGGCTCACGCTTCCCTCCCGGGCAGGCGCAGACGGGTAAGCGG----AGCCAACATGCCGGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTACGTGACCCCGCGGAGGCCCTTTGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCTGGGAAGTGGTTCGGCTTCCGGGAGGAGGCGGGTAACACGTGAATGa i papAnu2.chr19 C 0 M 1331 s chlSab2.chr6 46865480 423 + 50890351 -----TTTGGGTTGGATGGTCGCGCGGGCCTTCCGAGCTTCCATGAGTAAGCTAAAGGCGTTAGGGATTGGAGT-AGGGTGGTTGAACGGGAGTGCAGCACGGTAGTGGGGGCGGATACTGGCGATGAGAGCTTTGGAGGTTATTCTCGCGAGATCCAATCCGGGCGCCGCAAGGTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGCCCGG--AGCT-CTTAGGCTCACGCTTCCCTCCCGGTCAGGCGCAGACGGGTAAGCGG----AGCCAACATGCCGGTGGCCCGGAGCTGGGTATGTCGCAAAACTTACGTGACCCCGCGGAGACCCTTTGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCTGGGAAGTGGTTCGGCTTCCG---GGAGGCGGGTAACACGTGGATGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45461589 409 + 49145316 -----TTTGGGCTGGATGTTCGCGCGGGCCTTCCGAGCTTCCATGAGCAAGCTAAAGACGTTAGGGATCAGAGC-AGGGAGGCTGAATGAGAAAGCAGCACGGTTTTTGGGGCGGATACTGATTATGAAAGCTTTTGAAGTGATTCTCGCGAGATCCAATCTGGGCGCCGCGAAGTTTTGGCGCAGTTGTGGGACTGCGCTGGCGCCACCTAG--AGCC-CTCATTTTCCAACTTTCCTTCCGCGCAGGCGCAGACGGGTAAGCGGAGCCAGCCAGCATGCCAGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTATGTGACCCCGCGGAGACCCTTCGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGCC----TTCCGAGAGGCG---------------------GGTTAGCACGTGGATGA i calJac3.chr22 C 0 C 0 s mm10.chr7 3704100 406 + 145441459 -----TTGATGGTGTAAGGTAACG-GAGCCATTCGAATCTTCATGAACATGCTGA----GTAAGAGGGTGGGGCGAAGGTGGCTGGAAG---TTACAACACGGTTGTGGAA--CAATCCCATTTTCAAGTTTTCTAAGGCGGATTTCTCTGAGAGCCGAGTTGGTGTCGCCGTGTCCCTAGCGGGGTTTTG---CTGCACATGCGCCACAAGATTATTT-TTTAAAACGACACTTTACT---GCGCAGGCGCAGCCGGCCTAGCGA----GGTCAACATGCCGGTCGCCAGAAGCTGGGTTTGTCGCAAAACCTATGTGACCCCACGGAGACCCTTCGAGAAGTCGCGTCTCGACCAGGAGCTAAAGTTGATTGGTGAGTGGCCAAAGTAGAATTTCGAATTGCGG------ATCCGGGAAGAGTTAGGTAGCC-----ATGA i mm10.chr7 I 1 I 4 s canFam3.chr1 102989486 286 + 122678785 CAGGGGGTGGGTTGCGAGGTCG-----------------------------------------------------GAGACGGTCAGATGAGACTGCAGCGCGGGAGTGTGGG---------------------------------TTCGCTAG-------------------------------------GGGGCCGCGTAGGCGCCGTCCAC--GCCCACACGGGCCCTTCTTGCCCTCCCGCGCAGGCGGACGC------GCGG----AGCCAACATGCCAGTGGCCCGGAGCTGGGTGTGTCGTAAGACTTATGTGACCCCTCGGAGGCCCTTCGAGAAGTCGCGCCTCGACCAGGAACTGAAACTGATCGGTGAGTAGCCTGGAC------CCG------GCTTCCGCTTCCG---GGTGAGGG-------GTGGGCGA i canFam3.chr1 C 0 C 0 a score=207965.000000 s hg38.chr19_GL949747v2_alt 176325 113 + 729520 AGGTGCCCA-TGTACTCTATCTAGTCCGTCCCCTAAATTTGGTACTAT----TCGTGGTTTAGGAAGGTTTTGTGATTCCAAAGCTGCCAGTCTAGTTGTTGTGCCAGTACGTGGGAC s panTro4.chr19 59109005 113 + 63644993 AGGCGCCCA-TGTACTCTATCTAGTCCGTCCCCTAAATTTGGTACTAT----TCGTGGTTTAGGAAGGTTTTGTGAATCCAAAGCTGCCAGTCTAGTTGTTGTGCCAGTACGTGGGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55986385 113 + 60714840 AGGCGCCCG-CGTGCTCGATCTAGTCCGCCTCCTAAATTTGGTACTAT----TCGTGGTTTAGGAAGGTTTTGTGTATCCAAAACTGCCAGCCTAGTTTTTGTGCCAGTACGTGGGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102756087 114 - 106955855 ACGCGCCCAGGGTGCTCGATCTAGTCCGCCCCCTAAATTTGGTACTAT----TGGTGGTTTAGGAAGGTTTTGTGTATCCAAAGCTGCCAGCCTGGTTTTTGTGCCGGTACGTGGGAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60043233 113 + 64156825 AGGCGCCCA-CGTGCTTGATCTAGTCGGCCCCCTAAATTTGGTACTCT----TCGTGGTTTGGGAAGGTTCTGTGTATCCAAAGCTGCCAGGGTAGTTTTTGTACCAGTACGTGGGAC i rheMac3.chr19 C 0 I 18 s macFas5.chr19 55068764 113 + 59248254 AGGCGCCCA-CGTGCTTGATCTAGTCGGCCCCCTAAATTTGGTACTCT----TCGTGGTTTGGGAAGGTTCTGTGTATCCAAAGCTGCCAGGGTAGTTTTTGTACCAGTACGTGGGAC i macFas5.chr19 C 0 I 18 s chlSab2.chr6 46865903 113 + 50890351 AGGCGCCCA-CGTGCTTGATCTAGTCTGCCCCCTAAATTTGGTACTCT----TCGTGGTTTAGGAAGGTTCTGTGTATCCAAAGCTGCCAGGGTAGTTTTTGTACCAGTACGTGGGAC i chlSab2.chr6 C 0 I 10741 s calJac3.chr22 45461998 113 + 49145316 GGGTGCCCA-CGTGCTCGATCCAGTCTGCCCTCTAAATTTGGCACTGT----TCGTGGTGTAGAAAGGTTTTGTTTGTCCAACGTTGCCGGCCTAGTTTTTGTACTAATCTCCGAGAC i calJac3.chr22 C 0 C 0 s mm10.chr7 3704510 93 + 145441459 TGTCTCCCA-CGTGCTCGTTCTGGAGCATCCT----GTGTGGCGCCAGAGGATTGCAGTTTA-----GTTTTGTGTTCTC-------------TAGTCGCCATGC--ACATGTAGTAA i mm10.chr7 I 4 I 5 s canFam3.chr1 102989772 37 + 122678785 -GGCCGCCG-CGTGCTGGCTCTGCGCCACCTGCCGGGCC------------------------------------------------------------------------------- i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47170785 1331 + 51301725 M a score=594972.000000 s hg38.chr19_GL949747v2_alt 176438 164 + 729520 TACACTTG-TCCACCCCCTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCCGCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGTGCGTATGGG s panTro4.chr19 59109118 164 + 63644993 TACACTTG-TCCACCCCCTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCCGCAAGGCCGCTCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGTGCGTATGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55986498 164 + 60714840 TACACTTG-TTCACCCCTTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCCGCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGTGCGTATGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102756201 164 - 106955855 CACACTTG-TCCACCCCCTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAATAAACGTGAGGTCTGGAGGGTCAAATTTACCTTGGCCAAGATCCGCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGTGTGTATGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60043364 164 + 64156825 TACACTTT-TCCACTCTCTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCCGCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGTACGTATGGG i rheMac3.chr19 I 18 C 0 s macFas5.chr19 55068895 164 + 59248254 TACACTTT-TCCACTCTCTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCCGCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGTACGTATGGG i macFas5.chr19 I 18 C 0 s chlSab2.chr6 46876757 164 + 50890351 TACACTTG-TCCACTCTCTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCCGCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGACTGTTCGAAGGTACGTGTGGG i chlSab2.chr6 I 10741 C 0 s calJac3.chr22 45462111 170 + 49145316 TAAACTTG-TCCATCTCCTTCTCCCCACCATATGCAGGCGAGTATGGGCTTCGGAACAAACGTGAGGTCTGGAGGGTCAAGTTTACCCTGGCCAAGATCCGCAAGGCCGCCCGAGAGCTGCTGACACTTGACGAGAAGGATCCACGGCGTCTTTTCGAAGGTGCGTATGGA i calJac3.chr22 C 0 C 0 s mm10.chr7 3704608 171 + 145441459 GGCTCTTGCCCCGCGGTCTCCTCCCAACCACGTGCAGGAGAGTATGGACTCCGGAACAAACGTGAGGTTTGGAGGGTCAAGTTTACCCTGGCCAAGATCCGTAAGGCGGCCCGGGAGCTGTTGACGCTAGACGAGAAGGATCCCCGGCGTCTGTTTGAAGGTGTGTATGAG i mm10.chr7 I 5 I 907 s canFam3.chr1 102989809 163 + 122678785 CCCAGCCA-GCCAGCGCCCTGTCTCCG-------CAGGCGAGTACGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAGTTTACCCTGGCCAAGATCCGCAAGGCCGCCCGGGAGCTGCTGACGCTGGACGAAAAGGACCCGCGGCGCCTGTTCGAAGGTGTGTGTGAG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47170785 1331 + 51301725 M a score=24664.000000 s hg38.chr19_GL949747v2_alt 176602 9 + 729520 AGTCCACAG s panTro4.chr19 59109282 9 + 63644993 AGTCCACAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55986662 9 + 60714840 AGTCCACAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102756365 9 - 106955855 AGTCCACAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60043528 9 + 64156825 AGTCCACAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55069059 9 + 59248254 AGTCCACAG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46876921 9 + 50890351 AATCCACAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45462281 9 + 49145316 AGCCCACAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 102989972 9 + 122678785 CGTGCACGG i canFam3.chr1 C 0 I 483 e mm10.chr7 3704779 907 + 145441459 I e papAnu2.chr19 47170785 1331 + 51301725 M a score=1072851.000000 s hg38.chr19_GL949747v2_alt 176611 528 + 729520 CAGAGGGATGGGGTGCAGGGCTTGTGAGGTTCATTCTCCCTTCTGTTGC-----CTCTGTTCCAGTGATGAGAGTTGTGTCATTGGATAAATGGAACCAGCCTTCTAAC------TTTTAGTGGCACTTGTGAAGTAGGAAAAGTGTATCTGGATC--AGTCTTTGCCCTGTTTCTTAGGTGTGTGGCTTTTTTGCCCAGTTATTGGACCTTCAGTTTAGTAATGACCAGAGCTAAAGATAGGCCTGGCACACCTGGGCACCCGTCTATATCTTTAT-----------------ATTCTGTTTATGTGGCCTGTTTGCTAGTGGATGAGAGTAGACTATGAAGTGGAATTTCTGGGCTAAGTGATGGTGATAACAGGGTTTGCACATTTGCTTGGTTTATTG--TTTTTTTAATTAAGTTTTCTCGttttatttagtcttttgagacggagtcttgctctgttgcccaggctggagtgccgtggcgccatttcggcttactgcaacccccgcctcctgggttcaaacaattctcctatcttagcctcccaagtagctggg s panTro4.chr19 59109291 544 + 63644993 CAGAGGGATGGGGTGCAGGGCTTGTGAGGTTCATTCTCCCTTCTGTTGC-----CTCTGTTCCAGTGATGAGAGTTGTGTCATTGGATAAATGGAGCCAGCCTTTTAAC------TTTTAGTGGCACTTGTGGAGTAGGAAAAGTGTATCTGGATC--AGTCTTTGCCCTGTTTCTTAGGTGTGTGGCTTTTTTGCCCAGTTACTGGACCTTCAGTTTAGTAATGACCAGAGATAAAGATAGGCCTGGCACACCTGGGCACCCGTCTATATCTTTATATGATGTCTC-AAAACAATTCTGTTTATGTGGCCTGTTTGCTAGTGGATGAGAGTAGACTATGAAGTGGAATTTCTGGGCTAAGTTATGGTGATAACAGGGTTTGCACATTTGCTTGGTTTGTTG--TTTTTTTAATTAAGTTTTCTCGttttatttagttttttgagacggagtcttgctctgtcgcccaggctggagtgccgtggcgcaatttcggcttactgcaacccccgcctcctgggttcaaacaattctcctatcttagcctcccaagtagctggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55986671 543 + 60714840 CAGAGGGATGGGGTGCAGGGCTTGTGAGGTTCATTCTCCCTTCTGGTGT-----CTCTGTTCCAGTGATGAGAGTTGTGTCATTGGATAAATGGAGCCAGCCTTTTAAC------TTTTAGTGGCACTTGTGGAGTAGGAAAAGTGGATCTGGATC--AGTCTTTGCCCTGTTTCTTAGGTGTGTGGCTTTTTTGCCCAGTTACTGGACCTTCAGTTTGGTAATGACCAGAGCTAAAGATAGGCCTGGCACACTTGGGCACTTGTCTGTGTCTTTATATGATGTCTC-AAAACAGTTCTGTTTATGTGGCCTGTTTGTTGGTGGATGAGAGTAGACTATGAAGTGGGATTTCTGGACTAAGTGATGGTGGTAACAGGGTTTGCACGTTTGCTTGGTTTATTG--TTTTTTTAATTAAATTTTCTCGTGttattta-ttttttgagacggagtcttgctctgtcgcccaggctggagtgccgtggcgcaatttcggcttactgcaacccccgcctcctgggttcaaacaattctcctatcttagcctcccaagtagctggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102756374 537 - 106955855 CAGAGGGATGGGGTGCAGGGCTTGTGAGGTTAATTCTGCCTTCTGCTGC-----CTCTGTTCCAGTGATGAGAG--GTGTCATTGGATAAATGGAGCCAGCCTTTTAAC------TTTTAGTGGCACTTGTGGAGGAGGAAAAGTGGATCTGGATC--AGTCTTTGCCCTGTTTCTTAGGTGTGTGGCTTTTTTGCCCAGTTACTGGACCTTCAGTTTAGTAACGACCAGAGCTAAAGATAGGCCTGGCACACTTGGGCACCTGTCTA------TATATGATGTCTC-AAAACAGTTCTGTTTCTGTGGCCTGTTTGCTGGAGG-TGAGAGTAGACTATGCAGTGGAATTTCTGGACTAAGAGATGGTGATAACAGGGTTTGCACATTTGCTTGGTTTATTGTTTTTTTTTAATTAAACTTTCTCGttttatttatttttttgagacggagtcttgctctgtcgcccaggctggagtgccgtggcgcaatttcagcttactgcaacccctgcttcctgggttcaaacaattctcctatctcagcctcccaagtagctggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60043537 543 + 64156825 CAGAGCGATGGGGCGCAGGGCTTGTGAGGGGCATTCTCCGTTCTGCCGC-----CTCTGTTCTAGTGAT--GAGTTGTGTCATTGGGCAAATGGAGCCAGCCTTTTAACTTAGTGTTTTAATGGCACTTGCGGAGTAGGAAATGTGGAACTGGATC--AGTCTTTGTCCTGTTTCTTAGGCGTGTGGCTTTTTTGCCCAGTTACTGGACCTTCAGTTTAGTAATGACCAGAGCTAAAGATAGGCCT-GCACATTTGGGCACTTGTCTATATCTTTATATGGTATCTC-AAAACAGTACTGCTTGTGTGGCCTGTTTGCTGGTGG-TGAGAGTAGACTAGGAAGTGGAATTTCTGGAATAAGTGATGGTGGTAACAGGGTTTGCACGTTTGCTTGCttta-----tttttttttttaattttttttgttttgtttatttttttgagacagagtcttgctctgtcgcccaggctggagtgcagtggctcaatttcggcttactgcaacccccgcctcctgggttcaaacaattctcctatttcagcctcctaagtagctggt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55069068 541 + 59248254 CAGAGCGATGGGGCGCAGGGCTTGTGA-GGGCATTCTCCGTTCTGCCGC-----CTCTGTTCTAGTGAT--GAGTTGTGTCATTGGACAAATGGAGCCAGCCTTTTAACTTAGTGTTTTAATGGCACTTGCGGAGTAGGAAAAGTGGAACTGGATC--AGTCTTTGTCCTGTTTCTTAGGCGTGTGGCTTTTTTGCCCAGTTACTGGACCTTCAGTTTAGTAATGACCAGAGCTAAAGATAGGTCT-GCACATTTGGGCACTTGTCTATATCTTTATATGGTATCTC-AAAACAGTACTGCTTGTGTGGCCTGTTTGCTGGTGG-TGAGAGTAGACTAGGAAGTGGAATTTCTGGAATAAGTGATGGTGATAACAGGGTTTGCACGTTTGCTTGCttta------tttttttttaaattttttttgttttgtttatttttttgagacagagtcttgctctgtcgcccaggctggagtgcagtggctcaatttcggcttactgcaacccccgcctcctgggttcaaacaattctcctatttcagcctcctaagtagctggt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46876930 539 + 50890351 CAGAGCGACGGGGCGCAGGGCTTGTGAGGGGCATACTCCGTTCTGCCGC-----CTCTGTTCTAGTGAT--GAGTTGTGTCATTGGACAAATGGAGCCAGCCTTTTAACTTAGTGTTTTAATGGCACTTGTGGAGTAGGAAAAGTGGAACTGGATCAGAGTCGTTGTCCTGTTTCTTAGGCGTGTGGCTTTTTTGCCCAGTTACTGGACCTTGAGTTTGGTAATGACCAGAGCTAAAGATAGGCCT-GCACATTTGGGCACTTGTCTATATCTTTATATGGTATCTC-AAAACAGTACTGCTTATGTGGTCGGTTTGCTGGTGG-CGAGAGTAGACTATGAAGTGGAATTTCTGGAATAAGTGATGGTGATAACAGGGTTTACACATTTGCTTGCTTTA-----TGTTTTTAAAAAATtttttttgt----tttatttttttgggac--agtcttgctctgttgcccaggctggagtgcagtggctcaatttcggcttactgcaacccctgcctcctgggttcaaacaattctcctatttcagcctcctaagtagctggt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45462290 522 + 49145316 CAGAGGGATGGACCGCAGGGCTTGGGAGGTTCATTGTCCCTTATTGTGAGGCTGCTCTGTTCCAATGATGGGAGTTGTGACCTTGGACAAACAGAGACAGCCTTTTAACTTGGTGTTTTAATGGGACTTGTGGAGTAGGAACAGTGGAGCTGGATC--AGTCTTTGCCCTGTTTCCTAGCTCTGTGGC-TTGTTACCCAGTTCCTGGACTTTGAGTTTAGTAATGACCAGAGCTAAAG--AGGCCTGGCACACTTGGGCACCTGACTATATCTTTATATGATGTCACAAAAACAATTCTGATCATGTGACCTCCTTGCTAGTGG-TGAGAGTAGACTGTGAAGTCGAATTTCTGGAATGAGTGATGGTGATAACAGGTTTT-CACATTTGCTTAT---------TTTTTTAAATTAAA--------------------ttttgagacagaatctcacttta--gcccaggttagagtgcaatggcaggatctcagctcactgcaacctgcacctcccgggttcaagcaatactcctgcctcagcctcccaagtagctggg i calJac3.chr22 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102989981 483 + 122678785 I e papAnu2.chr19 47170785 1331 + 51301725 M a score=273581.000000 s hg38.chr19_GL949747v2_alt 177139 164 + 729520 actacagacaggcgcacgccaccacacctggctaattttacttttgagacggagtctcgctccattgcccatgctggagtgtagttgtcgcaatcttggctcactgcaaactccgcctccagagttcaagcgattctcctgtcttagcctcctaagtagctgga s panTro4.chr19 59109835 164 + 63644993 actacagacaggcgcatgccaccacacctggctaattttacttttgagacggagtctcgctctattgcccatgctggagtgtagttgtcgcaatcttggctcactgcaaactccgcctccagagttcaagcgattctcctgtcttagcctcctaagtagctgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55987214 164 + 60714840 actacagacaggcgcacgccaccacgcctggctaattttacttttgagatggagtctcgctctattgcccgtgctgtagtgcagttgtcgcaatcttggctcactgcaaactccgcctccagagttcaaacgattctcctgtcttagcctcctaagtagctggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102756911 164 - 106955855 actacagacaggcacacgccaccacgcctggctaattttacttttgagacggagtctcgcgctgttgcccatgctggagtgcagttgtcgcaatcttggctccctgcaaactccgcctccagattgcaagcgattctcctgtcttagcctcctaagtagctggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60044080 164 + 64156825 actacagacagtcacacgccaccacgcccggctaattttacttttgattcggagtctcgctcagttgcccaggctggagtgcagttggtgcagtctccgctcactgcaaactctgcctcccgggttcaagcgattttgcagtctcagcctcccaagtagctggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55069609 164 + 59248254 actacagacaggcacacgccaccacgcccggctaattttacttttgatacggagtcttgctcagttgcccaggctggagtgcagttggtgcagtttccgctcactgcaaactctgcctcccgggttcaagcgattttccagtctcagcctcccaagtagctggg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46877469 164 + 50890351 actacagacaggcacacgccaccacatccggcTAAttttacttttgatacggagtctcgctcagttgcccaggctggagtgcagttggtgcagtctccactcactgcaaactctgcctccctggttcaagcgattttccagtctcagcctcccaagtagctggg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102989981 483 + 122678785 I e calJac3.chr22 45462812 0 + 49145316 C e papAnu2.chr19 47170785 1331 + 51301725 M a score=600142.000000 s hg38.chr19_GL949747v2_alt 177303 279 + 729520 atcacaggc-----atgggccaccaagcctggctaattttctattattagtggagatgggttttcaccatgttgtccaggctggtGCTTGTTTTTTtaagctggtcaaggacatttaggtggtatttagcaaaggcctgaacaggagagaacctgtaaaatgtctcagggaacagcatttcaggTGATGACTTTAGGAGGGCATGCAGATCACATAGACTTAGGCTTACtttactaattgtggtgaaatacacattaaattgaaaatgtaccatcttaaccatc s panTro4.chr19 59109999 279 + 63644993 atcacaggc-----atgggccaccaagcctggctaattttctattattagtggagatgggttttcaccatgttgtccaggctggtGCTTGttttattaagctggtcaaggacatttaggtggtatttagcaaaggcctgaacaggagagaatctgtaaaatgtctcagggaacagcatttcaggTGATGACTTTAGGAGGGCATGCAGATCACGTAGACTTAGGCTTACtttactaattgtggtgaaatatacattaacttgaaagtgtaccatcttaaccatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55987378 279 + 60714840 atcacaggc-----atgcgccaccaaacctggcTAAttttgtattatgagtggagacgggttttcaccatgttgcccaggctggtgcttgttttattaagctggtCAAGGACATTTaggtggtatttagcaaaggcctgaacaggagagaatctgtaaaatgtctcagggaacagcatttcaggTGATGACTTTAGGAGGGCATGCAGATCGCATAGACTTAGGCTTACTTTACTAATTGTGGTGAAATATATATTAACTTGAAAATGTGCCATCTTAACCATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102757075 276 - 106955855 atcacaggc-----atgcgccaccaagcctggcTAAttttgtattattagtggagacgggttttcaccatgttgcccaggctggtGCTTGTTTTATTAAGCTGGTCAAGGACATTTAGGTGGTATTTAGCAAAGGCCTGAA---GAGAGAATCTGTAAAATGTTTCAGGGAACAGCATTTCAGGTGATGGCTTTAGGAGGGCACGCAGATCGCATGGACTTAGGCTTACTTTACGAATTGCGGCGAAATATACATTAACTTGAAAATGTACCATCTTAATCGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60044244 284 + 64156825 atcacaggctaataatgcaccaccacgcccggctaattttgtattattagtagagacggggtttcaccatgttgcccaggctggtGCTTGCTTTATTAAGCTGGTTAAGGACATGTAGATGGCATTGAGCAAAGGCCTGAACAGGAGAGAATCTGTAAAATGTCTCAGGGAACAGCATTTCAGGTGATGACTTTAGAAGGGCATGCAGATCATATAGATTTAGGCTTGCTTTACTAATTGTGGTGGAACAGACATTAACATGAAAGTTGATCATGTTAACCATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55069773 284 + 59248254 atcacaggctaataatgcaccaccacgcccggctaattttgtattattagtagagacggggtttcaccatgttgcccaggctggtGCTTGCTTTATTAAGCTGGTTAAGGACATGTagatggcattgagcaaaggcctgaacaggagagaatctgtgaaatgtctcagggaacagcatttcaggTGATGACTTTAGAAGGGCATGCAGATCATATAGACTTAGGCTTGCTTTACTAATCGTGGTGGAACAGACATTAACATGAAAGTTGATCATGTTAACCATT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46877633 278 + 50890351 atcacaggc---taatgcaccaccacgcccagctaattttg---tattagtagagacggggtttcaccatgttgcccaggctggtGCTTGCTTTATTAAGCTGGTTAAGGACATGTAGATGGCATTGAGCAAAGGCCTGAACAGGAGAGAATATGTAAAATGTCTCAGGGAACAGCATTTCAGGTGATGACTTTAGAAGGGCATGCAGATCATATAGACTTAGGCTTACTTTACTAATTGTGGTGGAACAGACATTAACATGAAAGTTGATCATCTTAACCATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45462812 279 + 49145316 atcacagtc-----atgcgccaccatgcagggctaattttgtatttttagtagagaccaggtttccccatgtgggccaggctggtGCTTGCTTTATTAAGCTGGTCAAGGACGTTTAGGTAGCATTAAGCAAAGGCCTGAACAGGAGAGAATCTGTTAAATGTCTCAGGGGACAGCATTTCAGTTGATGACTTGGGAGGGGTATGCAGGTCATACAGACTTCGGCTTACTTTACTAACTGTGGTGAAATAGACGTTAAGATGAAAATCTGTCGTCTTAACCATT i calJac3.chr22 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102989981 483 + 122678785 I e papAnu2.chr19 47170785 1331 + 51301725 M a score=233549.000000 s hg38.chr19_GL949747v2_alt 177582 82 + 729520 ttG---TTTTAAAATCTACTCTGAGATGCGGTGTTATTGGAGTGCTTTCTACAGCAGATTGGCATGACCAAGATTGGCATTTGTA s panTro4.chr19 59110278 82 + 63644993 ttG---TTTTAAAATCTACTCTGAGATGCGGTGTTATTGGAGTGCTTTCTACAGCAGATTGGCATGACCAAGATTGGCATTAGTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55987657 82 + 60714840 TTG---TTTTAAAATCTGCTCTGAGATGCGGTGTTATTGGAGTGCTTTCTACAGCAGATTGGCATGACCAAGATTGGCATTAGTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102757351 80 - 106955855 TTG---TTTGAAAGTCTACTCTGAGATGC--TGTTATTGGAGTGCTTTCTACAGCAGATTGGCATGACCGAGATTGGCGTTAGTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60044528 82 + 64156825 TTG---TTTTAAAATTTACTCTGAGATGCGGTGTTATTGGAGTGCTTTCTACGGCAGATTGGCGTGACCAAGATTGGCATTAGTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55070057 82 + 59248254 TTG---TTTTAAAATTTACTCTGAGATGCGGTGTTATTGGAGTGCTTTCTACGGCAGATTGGCATGACCAAGATTGGCATTAGTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47172117 82 + 51301725 TTG---TTTTAAAATCTACTCTGAGATGCAGTGTTATTGGAGTGCTTTCTACAGCAGATTGGCATGACCAAGATTGGCATTAGTA i papAnu2.chr19 M 1331 C 0 s chlSab2.chr6 46877911 82 + 50890351 TTG---TTTTAAAATCTACTCTGAGATGCGGTGTTATTGGAGTGCTTTCTACAGCAGATTGGCATGACCAAGATTGGCATTAGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45463091 85 + 49145316 TAGGATCTTGAGCTTCTGCTCTGAGACGCGGTGTTGCTGGAGTGCTTTCTACAGCAGACTGGCACCCCTGAGACGGACATTAGTA i calJac3.chr22 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102989981 483 + 122678785 I a score=531398.000000 s hg38.chr19_GL949747v2_alt 177664 194 + 729520 TATCCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGATTTATGGTGAAAAGCAGTCTCTACACCTGAGCCCTGACTGTTA-GGCAT--GAGAGTGGTCATCCATGTTAGGCGTTGAGAAAGTCCTGGCGCATGTTTAGCTACAGATTATCACAGTTTGT-CCCAGGCTTGCAGATGTTAGAAGC------------------tt--tttcttt s panTro4.chr19 59110360 194 + 63644993 TATCCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGATTTATGGTGAAAAGCAGTCTCTACACCTGAGCCCTGACTGTTA-GGCAT--GAGAGTGGTCATCCATGTTAGGCGTTGAGAAAGTCCTGGAGCATGTTTAGCCACAGATTGTCACAGTTTGT-CCCAGGCTTGCAGATGTTAGAAGC------------------tt--tttcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55987739 195 + 60714840 TATTCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGATTTATGGTGAAAAGCAGTCTCTACGCCTGAGCCCTGACTGTTGTGGCAT--GAGAGTGGTCGTCCATATTAGGTGTTGAGAAAGTCCTGGAGCATGTTTAGCCACAGATTATCACAGTTTGT-CCCAGGCTTGCAGATGTTAGAAGC------------------tt--tttcttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102757431 194 - 106955855 TATCCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGACTTATGGTGAAAAGCAGTCTCTACACCTGAGCCCTGACTGTTA-AGCAT--GAGAGGGGTCATCCATATTAGGCATTGAGAAAGTCCTGGAGCATGTTTAGCCACAGATTATCACAGTTTGT-CCCAGGTTTGCAGATGTTAGAAGC------------------tt--tttttta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60044610 210 + 64156825 TTTCCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGATTTGTGGTGAAAAGCAGTCTCTGCACCTGAGCCCTGAC--TGA-GGCAT--GAGAGTGGTCATCCACGTTAGGCATTGAGAAGGTCCTGGAGCATGCTTAGCCACAGATTATCGCAGTTTGA-CCCGGGCTTGCAGATGTTAGAAGCtttttttttttttttttttt--ttttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55070139 206 + 59248254 TTTCCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGATTTGTGGTGAAAAGCAGTCTCTGCACCTGAGCCCTGAC--TGA-GGCAT--GAGAGTGGTCATCCACGTTAGGCATTGAGAAGGTCCTGGAGCATGCTTAGCCACAGATTATCGCAGTTTGA-CCCGGGCTTGCAGATGTTAGAAGC----TTTTTTTTTTTttttt--ttttttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47172199 198 + 51301725 TATTCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGATTTGTGGTGAAAATCAGTCTCTGCACCTGAGCCCTGACTGTGA-GGCAT--GAGAGTGGCCATCCATAGGAGGCATTGAGAAGGTCCTGGAGCATGCTTAGCCACAGATTATCGCAGTTTGACCCCGGGCTTGCAGATgttagaagc---------------ttttt--ttttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46877993 208 + 50890351 TATCCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCGTGATTTGTGGTGAAAAGCAGTCTCTGCACCTGAGCCCTGACTGTGA-GGCAT--GAGAGTGGTCATCCATATTAGGCATTGAGAAAGTCCCGGAGCATGCTTAGCCACAGATTATCGCAGTTTGA-CCTGGGCTTGCAGATGTTAGAAGC----CTTTTTTTTTTttttt--ttttttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45463176 193 + 49145316 TATCCTGAGACGCTGCATT-TGCCTGCGCTTGGGTAGTCATGATTTATGGTGAAGAGCAGAGTCTGCACCTGAGCCCTGACTGTTA-GGCGTCAGAGAGCGGTTGTCCATATTGGACAT------------GGAGCGTGCTTAGCCACAGATTATCACAG--TGC-CCCAGGCCTGCGGATGTTACAAGC-------TTTCTtttctttt--ctttttt i calJac3.chr22 C 0 C 0 s canFam3.chr1 102990464 121 + 122678785 TATCCT--GATGTTGCTTTGGGCCTGAGCTTAGGGAATCTTGGTTTATGGTGAAAGGCAG-----------GAG-------------GGGCT--GGGAATA-----------------------------------ATGCCTGGT---------------TTTTT-CCTGAGTTTTCAAA-GTTACTAGT------------------TTGATTTCTTT i canFam3.chr1 I 483 I 110 e mm10.chr7 3704779 907 + 145441459 I a score=374450.000000 s hg38.chr19_GL949747v2_alt 177858 147 + 729520 aaata--------ggcacaggatcttgcagtgttgacc-----aggatggtttccaactcctaacctcaagtgatccatccacctcagctttccaaagtgctggggttacaggtgtaagccaccgcacctgaccCTTTCATTCTTTTCGTCAATTTGTAG s panTro4.chr19 59110554 147 + 63644993 aaata--------ggcacaggatcttgcagtgttgccc-----aggatggtttccaactcctaacctcaagtgatccttccacctcagctttccatagtgctggggttacaggtgtaagccaccgcacctgaccCTTTCATTCTTTTCGTCAATTTGTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55987934 147 + 60714840 aaata--------ggcataggatcttgcagtgttgccc-----agggtggtttccaactactgacctcaagtgatccttccgcctcaggtttccatagtgctggggttacaggtgtaagccaccgcacctgaccCTTTCATTCTTTTCGTCGATTTGTAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102757625 134 - 106955855 aaata--------ggcacaggatcttgcagtgttgccc-----aggatggtttccaactcctgacctcaagtgatcc-------------ttccatagtgctggggttacaggtgtaagccactgcacctgaccCTTTCATTCTTTTCGTCAATTTGTAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60044820 147 + 64156825 aaata--------ggcacaggatcttgcattgttgccc-----aggatggtttccaactcctggcctcaagtgatccttccacctcagccttaaatagtgctggggttccaggtgtaagccactgcacctgaccCTTTCATTCTTTTTGTCAATTTGTAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55070345 147 + 59248254 aaata--------ggcacaggatcttgcattgttgccc-----aggatggtttccaactcctggcctcaagtgatccttccacctcaaccttaaatagtgctggggttccaggtgtaagccactgcacctgaccCTTTCATTCTTTTTGTCAATTTGTAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47172397 130 + 51301725 aaaaaaaaaaaaNGGCACAGGATCTTGcattgttgccc-----aggatggtttccaactcctggcctcaagtgatccttccgcctcagccttaAATAG-------------------------TGCACCTGaccctttcattctttttgtcaATTTGTAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46878201 147 + 50890351 aaata--------ggcacaggatcttgcattgttgccc-----aggatggtttccaactcctggcctcaagtgatccttccgcctcagccttaaatagtgctggggttccaggtgtaagccactgcacctgaccCTTTCATTCTTTTTGTCAATTTGTAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45463369 134 + 49145316 aaata--------gggacaggatcttgcaatgttgcccaggataggatggtttccaactcctggcctca------------------gccttgcaaagtgctggaattacaggtgtaagccactgcaccagaccCTTTCACTCTTTTTCTTAGATTGTAG i calJac3.chr22 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102990585 110 + 122678785 I a score=1285342.000000 s hg38.chr19_GL949747v2_alt 178005 445 + 729520 ACCCCGTTGATAATCTCATGAAAGTGCTGGAGATCCCTCCCCCATAGATACTGATGCT-GGGTGGGAATTCATCCCAGGGTTCTGTGGGGAGTGGGC--TATAGCTGGTTCTGGTTTTAGGGAGGACTTTCTGGACATAGATCCTAATTGCAATGAAACTTACAGTCATGTGAGAAAGCGGTGCAGGTGTCTGAGGGTTATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAAGGGGTACACAGTTGTTCAGGTGAGTACACTTTCTAGTAAATGAAGCCATCTAGCCTAGTCAGGGACAGGAA-GGAGGAG-CTTGGA-----TGTTTGCTCTTTGGTGTAATCCTGCCTTGAT------TCAGATCCAGCCTTTCCCACTAAGATGTGTGACT------AGCGAGATTCTGAGTCTC-GTCTGTT---AAGACTG--------AACAG-CCGCCAACATTTGGCTGGCAGTTAAT s panTro4.chr19 59110701 445 + 63644993 ACCCCGTTGGCAATCTCATGAAAGTGCTGGAGATCCCTCCCCCATAGATACTGATGCT-GGGTGGGAATTCATCCCAGGGTTCTGTGGGGAGTGGGC--TACAGCTGGTTCTGGTTTTAGGGAGGACTTTCTGGACATAGATCCTAATTGCAATGAAACTTACAGTCATGTGAGAAAGCGGTGCAGGTGTCTGAGGGTTATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAAGGGGTACACAGTTGTTCAGGTGAGTACGCTTTCTAGTAAATGAAGCCATCTAGCCTAGTCAGGGACAGGAA-GGAGGAG-CTTGGA-----TGTTTGCTCTTTGGTGTAATCCTGCCTTGAT------TCAGATCCAGCCTTTCCCACTAAGATGTGTGACT------AGCGAGATTCTGAGTCTC-GTCTGTT---AAGACTG--------AACAG-CCGCCAACATTTGGCTGGCAGTTAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55988081 446 + 60714840 ACCCCGTTGACAATCTCATGAAAGTGCTGGAGATCCCTCCCCCATAGATACTGATGCT-GGGTGGGAATTCATCCCAGGGTTCTGTGAGGAGTGGGC--TACAGCTGGTTCTGGTTTTAGGGAGGACTTTCTGAATATAGATCCTAATTGCAGTGAAACTTACAGTCATGTGAGAAAGCGGTGCAGGTGTCTGAGGGTTATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAAGGGGTACACAGCTGTTAAGGTGAGTACACTTTCTAGTAAATGAAGCCATTTAGCCTAGCCAGGGACAGGAA-GGAGGAG-CTTGGA-----TGTTTGCTctttggtgtaatcctgccttgat------tcagatccagcctttcccactaagctgtgtgact------ggcgagattctgagtctcagtctgtT---AAGACTG--------AACAG-CCGCCAACATTTGGCTGGCAGTTAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102757759 437 - 106955855 ACCCTGTTGACAATCTCATGAACGTGCTGGAGATCCCTCCCCCATGGATACCGATGCT-GGGTGGGAGTTCATCCCAGAGTTCTGTGGGGAGTGGGC--TACAGCTGGTTCTGGTTTTAGGGAGGAC-TTCTAGATATAGATCCTAATTGCAATGAAACTT--AGTCATGTGGGAAAGCGGTGCAGATGTCTGAGGGTTATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAAGGGGTACACAGCTGTTCAGGTGAGTACACTTTCTAGTAAATGAAGCCATCTAGCCTAGCCAGGGACAGGAA-GGAGGAG-CTTGGA-----TGTTTGCTCTTTGGTGTAATCCTGCCTTGAT------TCAGATCCAGCCTTTCCCACTAAGATGTGTGACT------GGCGAGAT--TGAGTCTT-GTCTGTT---AAGACTG--------AACAG-CCGCCAACATTTGGCTGGCAGT---T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60044967 441 + 64156825 ACCCCGTTGACAATCTCATGAAAGTGCTGGAGATCCCTCCCCCGTGGATACTGATACT-GGGTGGGAGTTTATCCCAGAGTCCTGTGGGGAGTGGGC--TACAGCTGGCTCTGGTTTTAGGGAGGACTTTCCGAATATAGAGCCTAATCGCAATGAAACTT--AGTCATGTGAGAAAGCGGTGCAGGTGTCTGAGGGATATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAGGGGGTAGACAGCTGTTCAGGTAAGTACACTTTCTAGTAAATGAAACCCTCTAGCCTAGCCAGGGACGGGAA-GGAGGAG-CTTGGA-----TGTTTGCTCTTTGGTGTAATCCTGCCTTGAT------TCAGATCCAGCCTTTCCCACTAA--CGTGTGACA------GGCGAGATTCTGAGTCTC-ATCTGGTA-AAAGACTG--------AACAGCCCGCTAACATTTGGCTGGCAGT---T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55070492 441 + 59248254 ACCCCGTTGACAATCTCATGAAAGTGCTGGAGATCCCTCCCCCGTGGATACTGATACT-GGGTGGGAGTTTATCCCAGAGTCCTGTGGGGAGTGGGC--TACAGCTGGCTCTGGTTTTAGGGAGGACTTTCCGAATATAGAGCCTAATCGCAATGAAACTT--AGTCATGTGAGAAAGCGGTGCAGGTGTCTGAGGGATATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAGGGGGTAGACAGCTGTTCAGGTAAGTACACTTTCTAGTAAATGAAACCCTCTAGCCTAGCCAGGGACGGGAA-GGAGGAG-CTTGGA-----TGTTTGCTCTTTGGTGTAATCCTGCCTTGAT------TCAGATCCAGCCTTTCCCACTAA--CGTGTGACA------GGCGAGATTCTGAGTCTC-ATCTGGTA-AAAGACTG--------AACAGCCCGCTAACATTTGGCTGGCAGT---T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47172527 440 + 51301725 ACCCCGTTGACAATCTCATGAAAGTGCTGGAGATCCCTCCCCCGTGGATACTGATACT-GGGTGGGAGTTTATCCCAGAGTCCTGTGGGGAGTGGGC--TACAGCTGGCTCTGGTTTTAGGGAGGACTTTCTGAATATAGAGCCTAATCGAAATGAAACTT--AGTCATGTGAGAGAGCGGTGCAGGTGTCAGAGGGATATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAGGGGGTAGACAGCTGTTCAGGTAAGTACACTTTCTAGTAAATGAAACCCTCTAGCCTAGCCAGGGACAGGAA-GGAGGAG-CTTGGA-----TGTTTGCTCTTTGGTGTAATCCTGCCTTGAT------TCAGATCCAGCCTTTCCCACTAA--CGTGTGACT------GGCGAGATTCGGAGTCTC-ATCTGTTA-AAAGACTG--------AACAG-CCGCAAACATTTGGCTGGCAGT---T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46878348 437 + 50890351 ACCCCGTTGACAATCTCATGAAAGTGCTGGAGATCCCTCCCCCGTGGATACTGATACT-GGGTGGGAGTTTATCCCAGAGTCCTGTGGGGAGTGGGC--TACAGCTGGCTCTGGTTTTAGGGAGGACTTTCTGAATATAGAGCCTAATCGCAATGAAACTT--AGTCACGTGAGAACGCGGTGCAGGTGTCTGAGGGATATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAGGGGGTAGACAGCTGTTCAGGTAAGTATACTTTCTAGTAAATGAAACCCTCTAGCCTAGCCAGGGACGGGAA-GGAGGAG-CTTGGA--------TTGCTCTTTGGTGTAATCCCGCCTTGAT------TCAGATCCAGCCTTTCCCACTAA--CGTGTGACT------GGCGAGATTCTGAGTCTC-ATCTGTTA-AAAGACTG--------AACAG-CCGCTAACATTTGGCTGGCAGT---T i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45463503 445 + 49145316 CCCCCTTTGACAATTTCATGAAAGTGCTGGAGTTGCC-AGCCCAAGGTTACTAATAATCGGATGGGAGTTTATCCCAGAGTCCTGTGGCAAGTGGGCTATACAGCTGGTTCTGGTTTTAGGGAGGACTTTGTTCATATAGAGCCTAATAGCAATGAAATTT--AGTCATGTGAGAA-GCGGTGTAGGTGTCTGAGGGTTATTTGTGGTTTTCCAAGGGAGAAGTGAA--AGATCCCAAGGGGCAGACAGCTCTTTAGGTTGGTACACTTTCTAGTAAGTGAAGCCATCTAGCCTAGCCAGGGGCAGGAAGGGAGGAG-CTTTGA-----TGTTTGCTCTTTGGTGTAGTCGTGCCTTGAT------TCAGATCCAGCATTTCCCACTAA--CGTGTGACT------AGCAAGAT-CTGAGTCTC-ATCTGTTAGAAAGATTG--------AACAG-CTGTTAACGTTTGGCTGACAGTTAAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102990695 419 + 122678785 ACCCAGTT---------CTGAAAATTCAGGAATCCCCTCCCCT----ATCCCACAGCT-AGTTGAAAGTGGA----GGAACTTTGTGAAGA--------TAGAGCTAGGTCAGGTCCTTGGTTGGA---------------------------TAAGCATT--CGTGTGGTGGGGTTGAGCAGCAGGTAACCCAGGAGTACTTGTGGTTCCCTGTGGCAGAAGAGGAGTGAGTTACAGGAGGTAGGCAGCACCACAGGTT-GTAGGCTTTCAAGTAAATAAGGCATTTAACTCCA---AGGGACAAGAA-GGAGGAACCCTGGAAGCTCTGCCAGTCTATTGGAGAGGTGTCTCACTCATAGAGCCTGGGGTCCAATCCATCCCACCGAGGCCTATGACTTTGGGCAGAAAACTTCTCTG-CTT-GCCTGTTCAAGAGACTGACTCTTAAACCAA-CAGCCAACATGTGGCAGAGGGTTCAT i canFam3.chr1 I 110 I 30 e mm10.chr7 3704779 907 + 145441459 I a score=485882.000000 s hg38.chr19_GL949747v2_alt 178450 190 + 729520 AATCAACAGATAGAggccaggcgtggtggctcatgcctgtaatcccagcactttgggagaccgaggtggtcggatcacttgaggtcaggagacctcaagtcagagaccagcctggccaacgtggtgaaattccatctctacgaaaaatacaaaaattagccgagcatggtggtgt--gcctataatcccagc s panTro4.chr19 59111146 182 + 63644993 AATCAACAGATAGAggccaggcgtggtggctcatgcctgtaatcccagcactttgggagaccgaggtggtcggatcacttgaggtcagg--------agttcgagaccagcctggccaatgtggtgaaattccatctctacgaaaaatacaaaaattagccgagcatggtggtgt--gcctataatcccagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55988527 182 + 60714840 AATCAACAGATAGAggccaggcgtggtggcttatgcctgtaaccccagcactttgggagaccgaggtggtcggatcacttgaggtcagg--------agtttgagaccagcctggccaacatggtgaaattcgatctctacgaaaaatacaaaaattagccgggcatggtggtgt--gcctgtaatcccagc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102758196 182 - 106955855 AATCAACAGATAGAggcccggcgtagtggctcatgcctgtaatcccagcactttgggagaccgaggtggtcggatcacttgaggtcagg--------agttcgagaccaccctggccgacatggtgaaattccatctccacgaaaaatacaaaaattagccgggcatggtggtgt--gcctataatcccagc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60045408 182 + 64156825 AACCAACAGATAGAggccaggcgcggtggctcatgcctgtaatcccagcactttgggagaccgaggtggtccgatctcttgaggtcagg--------agttggagactagcctggccaacatggtgaaattccatctctactaaaaatacaaaaattagccgggcctggtgttgg--tcctgtaatcccagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55070933 182 + 59248254 AACCAACAGATAGAggccaggcgcggtggctcatgcctgtaatcccagcactttgggagaccgaggtggtccgatcacttgaggtcagg--------agttggagactagcctggccaacatggtgaaattccatctctactaaaaatacaaaaattagccgggcctggtggtgg--tcctgtaatcccagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47172967 182 + 51301725 AACCAACAgatagaggccaggcgcggtggctcatgcctgtaatcccagcactttgggagaccgaggtggtcccatcacttgaggtcagg--------agttggagactagcctggccaacatggtgaaattccatctctactaaaaatacaaaaattagccgggcctggtggtgg--tcctgtaatcccagc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46878785 182 + 50890351 AACCAACAGATAGAggccaggcgcggtggctcatgcctgtaatcccagcactttgggagaccgaggtggtccgatcacttgaggtcagg--------agttggagactagcctggccaacatggtgaaattccatctctactaaaaatacaaaaattagctgggcctggtggtgg--tcctgtaatcccagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45463948 135 + 49145316 AACCAAC----Agaggccgggc--------------------------------gggaga-------------atcacctgaggttaag--------agttcaagaccagcctggccaacatggtgaaaccccatctttactaaaagtacaaaaattagctggatgtggtggggggcgcctgtatttccagc i calJac3.chr22 C 0 I 19 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102991114 30 + 122678785 I a score=209023.000000 s hg38.chr19_GL949747v2_alt 178640 132 + 729520 tactcgggaggctgaggcaggagaattgattgaacctgggagacagagactgcagtgagccgagatccgcggcactgcac-------tgggtgacagcgagac-----------AC-AAAACAACACGAACTCCCCCCCCACCCCCCAGCA s panTro4.chr19 59111328 129 + 63644993 tactcgggaggctgaggcaggagaattgattgaacttgggagacggagattgcagtgagccaagatccgcgacactgcac-------tgggtgacagcgagac-----------AC-AAAACAACACGAACTCCCCCC---CCCCCCAGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55988709 132 + 60714840 tactcgggaggctgaggcaggagaattgattgaacctgggagacagagattgcagtgagccgagatccgcggcactgcac-------tgtgtgacagcgagac------tcaaaac-aaaaaaacacaaaCTACCC-----ACCTCCAGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102758378 126 - 106955855 tactcaggaggcagaggcaggagaattgattgaacctgggagatggcgattgcagtgagccaagatccgcggcactgcac-------tgggtgacagcgagac-----------tcaaaaaaaaCACGAATTTC-------CCCCTCAGCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60045590 126 + 64156825 tactcgagaggctgaggcgggagaattgatcgaacctgggagacgga-----------------atccgcggcactgtgctccagcttgggtgacagcgagactccatctcaaaacaaaaaaaTCAGGAATT-C-------ACCCTCAGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55071115 126 + 59248254 tactcgagaggctgaggcgggagaattgatcgaacctgggagacgga-----------------atccgcggcactgtgctccagcttgggtgacagcgagactccatctcaaaacaaaaaaaTCAGGAATT-C-------ACCCTCAGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47173149 127 + 51301725 tactcgggaggctgagacaggagaattgatcgaacctgggagacgga-----------------atcCCCggcactgtgctccagcttgggtgacagcgagactccatctcaaaacaaaaaaatcaggaatTCC-------ACCCTCAGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46878967 127 + 50890351 tactcgggaggcggaggcgggagaattgatcgaacctgggagacgga-----------------atccgcagcactgcactccagcttgggtgacagcgagactccatctcaaaacaaaaaaaTCAGGAATTCC-------ACCCTCAGCA i chlSab2.chr6 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102991114 30 + 122678785 I e calJac3.chr22 45464083 19 + 49145316 I a score=74518.000000 s hg38.chr19_GL949747v2_alt 178772 30 + 729520 CAACTGTGAAGAAATGTAGGAGTCATGTCC s panTro4.chr19 59111457 30 + 63644993 CAACTGTGAAGAAATGTAGGAGTCATGTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55988841 30 + 60714840 CAACTGTGAAGAAATGTAGGAGTCATGTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102758504 30 - 106955855 CAACTGTGAAGAAATGTAGGAGTCATGTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60045716 30 + 64156825 CAACTGTGAATAAATGTGGGAATCATGTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55071241 30 + 59248254 CAACTGTGAATAAATGTGGGAATCATGTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47173276 30 + 51301725 CAACTGTGAATAAATGTAGAAATCATATCC i papAnu2.chr19 C 0 I 1499 s chlSab2.chr6 46879094 30 + 50890351 CAATTGTGAATAAATGTAGGAATCATGTCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102991144 28 + 122678785 cagccgtaaagaaact--ggtattgcatcc i canFam3.chr1 I 30 C 0 e mm10.chr7 3704779 907 + 145441459 I e calJac3.chr22 45464083 19 + 49145316 I a score=502350.000000 s hg38.chr19_GL949747v2_alt 178802 270 + 729520 ATTTTTCAGATCAGAAATGAAGGCATTGTAATACCTAACTGCCTTGTAT---GATGACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTAAAGCATTTTAAATTCTCTTGGTGCATTGGCCCAGTGGAGC-------------CTCAGCAGTAGGACATGCTTTTGTTGAAGGTGTAAGGTTTAT----TGTGCTGTTGAAAACTATT---GTCTTCATACTTA---AAGGTTTTGCCTGTGGCTGAC--TCTCCTGTTCTTTTTCAGGAGATAGATGGTTCAATA s panTro4.chr19 59111487 270 + 63644993 ATTTTTCAGATAAGAAATGAAGGCATTGTAATACCTGACTGCCTTGTAT---GATGACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTAAAGCATTTTAAATTCTCTTGGTGCATTGGCCCAGCGGAGC-------------CTCAGCAGTAGGACATGCTTTTGTTGAAGGTGTAAGGTTTAT----TGTGCTGTTGAAAACTATT---GTCTTCATACTTA---AAGGTTTTGCCTGTGGCTGAC--TCTCCTGTTCTTTTTCAGGAGATAGATGGTTTAATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55988871 270 + 60714840 ATTTTTCAGATCAGAAATGAAGGCATTGTAATACCTAACTGCCTTGTAT---GATGACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTAAAGCATTTTAAATTTTCTTGGTGCATTGGCCCAGCGGAGC-------------CTCAGCAGTAGGACATGCTTTTGTTGATGGTGTAAGGTTTAT----TGTGCTGTTGAAAACTATT---GTCTTCATACTTA---AAGGTTTTGCCTGTGGCTGAC--CCTCCTGTTCTTTTTCAGGAGATAGATGGTTTAATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102758534 270 - 106955855 ATTTTTCAGATCAGAAAGGAAGGCGTTGTAATACCTAATTGCTTTGTAT---GAGGACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTACAGTATTTTAAATTCTCCTGGCGCATTGGCCCAGTGGCGC-------------CTCAGCAGCAGGACATGCTTTTGTTGCAGGTGTAAGGTTTAT----TGTGCTGTTGAAAACTACT---GTCTTCATACTTA---AAGGTTTTGCCTGTGGCTGAC--CTTCGTGTTCTTTTTCAGGAGATAGATGGTTTAATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60045746 276 + 64156825 ATTTTTCAGATCAGAAATGAAGGCGTTGTAATACC----TGCCTTGTAT------GACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTAAAGCATTTTAAATTCTCTCGGTGCATTGGCCCAGCGGAGCCCGTGTAACAGTACTCAGTAGCAGGACATGGTTTTGTTGAAGGTGTAAGGTTTAT----TGTGCTGTTGAAAACTATT---GTCTTCATACTTC---AAGGTTTTGCCTGTGGTTGAC--TCTTCTGTTCTTTTTCAGGAGATAGATGGGTTAATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55071271 276 + 59248254 ATTTTTCAGATCAGAAATGAAGGCGTTGTAATACC----TGCCTTGTAT------GACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTAAAGCATTTTAAATTCTCTCGGTGCATTGGCCCAGCGGAGCCCGTGTAACAGTACTCAGTAGCAGGACATGGTTTTGTTGAAGGTGTAAGGTTTAT----TGTGCTGTTGAAAACTATT---GTCTTCATACTTC---AAGGTTTTGCCTGTGGTTGAC--TCTTCTGTTCTTTTTCAGGAGATAGATGGGTTAATA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46879124 272 + 50890351 ATTTTTCAGATCAGAAATGAAGGCGTTGTAATACC----TGCCTCGTAT------GACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTAAAGCATTTTAAATTCTCTTGGTGCATTGGCCCAGCGGAGCCCGTGTAACAGTACTCAGTAGCAGGACATGATTTTGTTGAAGGTGTAAGGTTTAT----GGTGCTGTTGAAAACTGTT---GTCTTCATACTTA---AAGGTTTTGCCTGTGGTTGAC--TCTTCTGTTCTTTTTCAG----TAGATGGGTTAATA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102991172 288 + 122678785 gtttttcagatcagaaactgaagtacTTGAGT-------TGCCTTGTGTCATGATGACAGGGAAAGACGTATGCGTCTGAGAATTGTCCTCATTGCTTTTACGTTTGTAAAATGTCCTGATTCTTGTT------TTGGCCAAACGGAGCCCACGTGATCT--TTCAGTGGTTGGACATACTCCTGTTGAAGATGCAAAGTTTATTCAGTGTGC-ATTGAAAATTATTTTAGTTCTTATATGTAGATAAGGCTGT-TCTGGTGTTGATGGGATGCTGGCTTTCCTCAGTGTGTAGGTGGTTTAATA i canFam3.chr1 C 0 I 1810 e mm10.chr7 3704779 907 + 145441459 I e calJac3.chr22 45464083 19 + 49145316 I e papAnu2.chr19 47173306 1499 + 51301725 I a score=1281984.000000 s hg38.chr19_GL949747v2_alt 179072 763 + 729520 AATGTGGGCctgagtgcagtggctcatgcctgtaatcccagcactttgggaggcagaggcaggcggatcacccgaggtcgggagtttgagactagcctgaccaaagtggagaaaccccttagtctctactgaaaa-aatacaaaattagcggggcgtggtggcgcatgcctgtaatcccaggctgaggcaggagaatcccaggaggcggagtttgcagtgagccgagatcacgccattgcactccagcctgggcaacgagagcgaaactctg---------------------------------tctcaaaaaTGATAATAAATGTGAAACAT--TTTTTTAAAATCATGCCTTTGTTTTGCCTAATGGTGACgatctca---ctttgtctcccgggctggagcacagtggcatggtcgtggctcactgcagcctggacctcctgtgcttaagtgatcctcctcagctctagtagctgggaccacaatccaccatgtaccaccatgcccagctaatttagttttac--ttttttgtttgttttggtacaaatgcggtctcactgtgttgccgaggctagtttcaaacttctggactcaactgatcctcctgcctcagcctcccaaaatattgggtttataggcCAGGCATAAGGGACTGTGCGTGGCttaagtttccattttctaatgtaaagacaaaaaggcgtgaagtgtccaaagaggtaaatgatcccaaactcattttcattgccttttggacatgtttttgtattttgatattcaggtgtttaaatatcctctgatg s panTro4.chr19 59111757 763 + 63644993 AATGTGGGCctgagtgcagtggctcatgcctgtaatcccagcactttgagaggccaaggcaggcggatcacctgaggtcgggagtttgagactagcctgaccaaagtggagaaaccccctagtctctactgaaaa-aatacaaaattagcggggcgtggtggtgcatacctgtaatcccaggctgaggcaggagaatcccgggaggcggagtttgcagtgagccgagatcacgccattgcactccagcctgggcaacaagagcgaaactctg---------------------------------tctcaaaaaTGATAATAAATGTGAAACAT--TTTTTTAAAATCATGCCTTTGTTTTGCCTAATGGTGACgatctca---ctttgtctcccgggctggagcacagtggcatggtcgtggctcactgcagcctggacctcctgtgcttaagtgatcctcctcagctctagtagctgggaccacaatccaccatgtaccaccatgcccggctaatttagttttac--ttttttgtttgttttggtacaaatgcggtctcactatgttgccgaggctagtttcaaacttctggactcaactgatcctcctgcctcagcctcccaaattattgggtttataggcCAGGCATAAGGGACTGTGCGTGGCTTAAGTTTCCATTTTCTAATGTAAAGACAAAAAGGCGTGAAGTGTCCAAAGAGGTAAATGATCCCAGACTCATTTTCATCACCTTTTGGACGTGTTTTTGTATTTTGATATTCAGGTGTTTAAATATCCTCTGAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55989141 754 + 60714840 AATGTGggccag-gtgcagtggctcatgcctgtaatcccagcactttgggaggcagaggcaggtggatcacctgaggtcgggagtttgagactagcctgaccaaagtggagaagcgccctagtctctactgaaaa-aatacaaaattagctgggcgtggtggcacatgcctgtaatcccaggctgaggcaggagaatcccgggaggcggagtttgcagtgagccgagatcacgccattgcactccagcctgggcaacaagagggaaa--ctg---------------------------------tctcaaaaatgataataaaTGTGAAACA---TTTTTTAAAATCATG-CTTTGTTTTGCCTAATGATGATgatctca---ctttgtctcccaggctggagcacagtggcatggtcgtgggtcactgcaacctgga----ctgtgcttaagtgatcctcctcagctctagtagctgggaccgcaatccaccatgtaccaccatgcctggctaatttagttttac--ttttttgtttgttttggtacaaatgcggtctcactatgttgccaaggctagtttcaaacttctggactcaactgatcctcctgcctcagcctcccaaaatactgggtttataggccaggcataagatactgtgcctggctGAAGTTTCTATTTTCTAATGTAAAGACAGAAAGGCGTGAAGTGTCCAAAGAGGTAAATGATCCCGAACTCATTTTCATCACCTTTTGGACATGTTTTTGTATTTTGATATTCAGGTGTTTAAATATCCTCTGATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102758804 760 - 106955855 AATGTGggccgg-gtgcagtggctcacgcctgtaatcccagcactttgggaggcagaggcaggcggatcacctgaggtc-ggagtttgagactagcctgaccaaagtggagaaaccccctag--tctactaaaaa-aatacaaaattagccgggcgtggtggcgcatgcctgtaatcccaggctaaggcaaggcaatcccgggaggcggagtttgcagtgagccgagatcacaccattgcactccagcctgggcagcaagagcgaagctctg---------------------------------tctcaaaaaTGATGATAAATGTGAAACAC-ATTTTTAAAAATCATGCCTTTGTTGTGCCTAATGGTGATgatctca---ctttgtctcccaggccagagcacagtggcgtggtcgtggctcactgcagcctggacctcctgtgcctaagtgatcctcctcagctctagtagctgggaccacaatccaccatgtatcaccatgcctggctaatttagttttac--ttttttgtttgttttcgtacaaatgcggtctcactatgttgccgaggctagtttcaaacttctggactcaactgatcctcctgcctcagcctcccaaaatactgggttgataggccaggcataaggtactgtgcctggcTGAAGTTTCTATTTTCTAATGTAAAGACAAAAAGGTGTGAAGTGTCCAAAGAGGTAAATGATCCCAAACTCATTTTCATTGCCTTTTCGACATGTTTTTGTATTTTGATATTCAGGTGTTTAAATATCCTCTGGTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60046022 793 + 64156825 AATGTGggtcgg-gcgcggtggctcacacctgtaattccagcactttgggaggcaaaggcaggcggatcacctgaggtcaggagttcaagcccagcctgaacgacgtggagaaaccccctagtctctactaaaaacaatacaaaattagccggccatggtggtgtgtgcctgtaatcctaggctgagtcaggagaatcccgggaagcagagtttgcagtgagccgagatca--ccattgtactccagcccgggcaac--gagggaaactccgtctgaaaaaTGATTGGCAACGAGGGAAACTCCATCTGAAAAATGATAATAAATGTGAAACACTTTCTTTTTAAATCATGGCTTTATTTTGCGTAATGGTGATgatctca---ctttgtctcccaggctggagcacagtggcatggttgtggctcactgcaacctggaccgcctgtgcttaagtgatcctcctcagctctagtagctgggactgcaatccaccatgtaccaccatgcctggctaatttagttttcc--tttttt-tttgttttggtacaaatggggtctcactatgttgcccaggctggtttcaaacttctggactcaatcgatgctcctgcctcagcctcccaaaatactgggtttatagggcaggcataaggtactgtgcctggcTGAAGTTTCTATTTTCTAATGTAAACACAAAAAGGCATGAAGTGTCCAAGGAGGTAAATGATCCCAAACTCGTTTTCATTGCCTTTTGGACATGTTTTTGTATTTTGATATTCAGGTGTTTAAAAATTCTCTGATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55071547 760 + 59248254 AATGTGggttgg-gcgcggtggctcacacctgtaattccagcactttgggaggcaaaggcaggcggatcacctgaggtcgggagttcaagaccagcctgaacaacgtggagaaaccccctagtctctactaaaaacaatacagaattagccggccatggtggtgtgtgcctgtaatcctaggctgagtcaggagaatcccgggaagcagagtttgcagtgagccgagatca--ccattgtactccagcccgggcaac--gagggaaactccg---------------------------------tctgaaaaaTGATAATAAATGTGAAACACTTTCTTTTTAAATCATGGCTTTATTTTGCGTAATGGTGATgatctca---ctttgtctcccaggctggagcacagtggcatggtcgtggctcactgcaacctggaccgcctgtgcttaagtgatcctcctcagctctagtagctgggactgcaatccaccatgtaccaccatgcctggctaatttagttttcc--tttttt-tttgttttggtacaaatggggtctcactatgttgcccaggctggtttcaaacttctggactcaatcgatgctcctgcctcagcctcccaaaatactgggtttatagggcaggcataaggtactgtgcctggcTGAAGTTTCTATTTTctaatgtaaacacaaaaaggcatgaagtgtccaaggaggtaaatgatcccaaactcgttttcattgccttttggacatgtttttgtattttgatattcaggtgtttaaaaattctctgatg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46879396 765 + 50890351 AATGTGggtcgg-gcgcggtggctcacacctgtaattccagcactttgggaggcaaaggcaggcggatcacctgaggtcgggagttcaagaccagcctgaacaacgtggagaaaccccctagtctctactaaaaaaagtacaaaattagccaggcatggtggtgtgtgcctgtaatcctaggctgagtcaggagaatcccgggaagcggaatttgcagtgagccgagatca--ccattgtactccagcctgggcaac--gagggaaaatccg---------------------------------tctgaaaaatgataataaaTGTGAAACACTTTCTTTTCAAATCATGGCTTTATTTTGCCTAATGGTGATGTCTCCAAcgctttgtctcctaggctggagcacagtggcatggtcgtggctcactgcaacctggaccgcctgtgcttaagtgatcctcctcagctctagtagctgggactgcaatccaccatgtaccaccatgactggctaatttagttttcccttttttt-tttgttttggtacaaatggggtctcactatgttgcccaggctggtttcaaacttctggatgcaatcgatgctcctgcctcagcctcccaaaatactgggtttatagggcaggcataaggtactgtgcctggcTGAAGTTTCTATTTTctaatgtaaacacaaaaaggcatgaagtgtccaaggaggtaaatgatcccaaactcgttttcattgccttttggacatgtttttgtattttgatattcaggtgtttaaaaatcctctgatg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102991460 1810 + 122678785 I e calJac3.chr22 45464083 19 + 49145316 I e papAnu2.chr19 47173306 1499 + 51301725 I a score=18134.000000 s hg38.chr19_GL949747v2_alt 179835 14 + 729520 ttga--gtta----aaaaag s panTro4.chr19 59112520 16 + 63644993 TTGAGTGTTA----AAAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55989895 16 + 60714840 TTGAGTGTTA----AAAAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102759564 16 - 106955855 TTGAGTGTTA----AAAAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60046815 18 + 64156825 TTGAGCATTAAA--AAAGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55072307 18 + 59248254 ttgagcattaaa--aaagag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47174805 13 + 51301725 -------ttaaaataaaaaa i papAnu2.chr19 I 1499 C 0 s chlSab2.chr6 46880161 18 + 50890351 ttgagcattaaa--aaagag i chlSab2.chr6 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102991460 1810 + 122678785 I e calJac3.chr22 45464083 19 + 49145316 I a score=1677080.000000 s hg38.chr19_GL949747v2_alt 179849 736 + 729520 aacaaaaattgaagccatagtatgacataggatgctggaaatgcacacagctggtgtt--tccattttgat----tctccctacctgtaactgctccctacTGGGAAAACTTT--GGGTCCTCACAAAGTGAGCTAGCTTTCTTTCAAACTTTGCTTGGAGGGT---AACAGTGCCAGGAATATCAGAAGTGCCTGATGCATGTAGATCTATTTATGAAAGCTTGCTTGAATGGTTTGCTGTAACTAGTAAGAGCCACTTTTTATAA--------AAGTGCAC---ATAAGGAAAAAAGGTTGAGGTGTTTACCCCA--GTCAAGGGGCAGTTGATTTGCTGAAGGCGTGTGGGATTATAGCAGTGAGCGGGAGCCTAGGGGATGGCGTTTGCCCCCAGGGCCCTGGGGCTGTGGGCAAGGGCAGT---CCAGAG-TATTAGCTAGAAGCCATGGCTTTGGACAGGGTAAGGAGCAAGCCGTCCTGAGCCTGGGGTTGGAAGAAAGGTGTAGTAG--GGCATCTGTTGGAT-ATTTTATGCAGTGC----ATTGTTAGGTTATATACATACTAGATCTATTTTTGGTGGAAAATTTTGTACAGAATAGTAAAATGAATGACATGTACTTAGC----TGGAAAAATTCTAGTGTTAGAAATTACTTTTCTCTC---CTTAAAAGATGTAGATACTGC--------TATTTATGGCAC--GGAATGTGATTCAATCTCACATCTGCTTAATCAGAA----GAGCTTTCTGGGCT-GAGGATATGAACTCTTCAGC s panTro4.chr19 59112536 738 + 63644993 AACAAAAATTGAAGCCATAGTATGACATAGGATGCTGGAAATGCACACAGCTGGTGTT--TCCATTTTGAT----TCCCTCTACCTGTAACTGCTCCCTACTGGGAAAACTTT--GGGTCCTCACAAAGTGAGCTAGCTTTCTTTCAAACTTTGCTTGGAGGGT---AACAGTGCCAGGAATATCAGAAGTGCCTGATGCATATGGATCTATTTATGAAAGCTTGCATGAATGGTTTGCTGTAACTAGTAAGAGCCACTTTTTATAA--------AAGTGCAC---ATAAGGAAAAAAGGTTGAGGTGTTTACCCCA--GTCAAGGGGCAGTTGATTTGCTGAACGCGTGTGGGATTATAGCAGTGAGCGGGAGCCTAGGGGATGGCGTTTGCCCCCAGGGCCCTGGGGCTGTGGGCAAGGGCAGT---CCAGAG-TATTAGCTAGAAGCCATGGCTTTAGACAGGGTAAGGAGCAAGCCATCCTGAGCCTGGGGTTGGAAGAAAGGTGTAGTAGCTGGCATCTGTTGGAT-ATTTTATGCAGTGC----ATTCTTAGGTTATATACATACTAGATATATTTTTGGTGGAAAATTTCGTACAGAATAGTAAAATGAATGACATGTACTTAGC----TGGAAAAACTCTAGTGTTAGAAATTACTTTTCTCTC---CTTAAAAGGTGTAGATACTGC--------TATTTATGGCAC--GGAATGTGATTCAGTCTCACATCTGGTTAATCAGAA----GAGCTTTCTGGGCT-GAGGATATGAACTCTTCAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55989911 742 + 60714840 AACAAAAATTGAAGCCATAGTATGACATAAGATGCTGGAAATGTACACAGCTGGTGTT--TCCATTTTGAT----TCTCCCTACCTGTAACTGCTCCTTACTGGGAAAACTTT--GGGTCCTCACAAAGTGAGCTAGCTTTCTTTCAAACTTTGCTTGGAGGGT---AACAGTGCCAGGAATATCAGAAGTGCCTGATGCATGTGGATCTATTTATGAAAACTTGCTTGAATGGTTTGCTATAACTAGTAAGAGCCACTTTTTATAA--------AAGTGCAC---ATAAGGAAAAAAGTTTGAGGTGTTTACCCCAGTGTCAAGGGGCAGTTGATTTGCCGAACGCGTATGGGATTATAGCAGTGAGCGGGAGCCTAGGGGAAGGCGTTTGCCCCCAGGGCCCTGTGGCTGTGGGCAAGGGCAGT---CCAGAGTTATTAGCTAGAAGCCATGGCTTTGGACAGGGTAAGTTGCAAGTCGTCCTGAGCCTGGGGTTGGAAGAAAGGTATAGTAGCTGACATCTGTTGCAT-ATTTTTTGCAGTGC----ATTGTTAGGTTATATACATACTAGATATATTTTTGGTGCAAAATTTCATACAGAATAGTAAAATGAATGACATGTACTTAGC----TGGAAAAATTCTAGTGTTAGAAATTACTTTTGTCTC---CTTAAAAGGTGTAGATACTGC--------TA-TTATGGCACAGGGAATGTGATTGAATCTCACATCTGGTTAATCAGAA----GAGCTTTCTGGACT-GAGGATATGAACTCTTAAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102759580 742 - 106955855 AACAAAAATTGAAGCCATAGTATGACATAGGTTGCTGGAAATGTACACGGCTGGTGTT--TCCATTTTGAT----TCTCCCTACCTGTAACTGCTCCCTACTGGGAAGAC--T--GGGTCCTCACAAAGTGAGCTAGCTTTCTTTCAAAC--TGCTTGGAGGGT---AACAGTGCCAGGAATATCAGAAGTGCCTGATGCATGTGGATCTATTTATGAAAGCTTGCTTGAATGGTTTGCTATAACTAGTAAGAGCCACTTTTTATAA--------AAGTGCAC---ATAAGGAAAAAAGTTTGAGGTGTTTACCCCAGTGTCAAGGGGCAGTTGATTTGCTGAACGCGTGTGGGATTATAGCAATGAGTGGGAGCCCAGGGGAAGGCGTTTGTCCCCGGGGCCCTGGGGCTGTGGGCAAGGGCAGT---CCAGAG-TATTAGCTAGAAGCCACGGCTTTGGACAGGGTAAGGAGCAAGCCGTCCTGAGCCT-GGGTTGGAAGAAAGGT---GTAGCTGACATATGTTGGAT-ATTTTATGCAGTGCATTGATTGTTACGTTATATACATACTATATATATTTTTGGTGGAAAATTTCATACAGAATAGTAAAATAAATGACATGTACTTAAC----TGGAAAAATTCTAGTGTTAGAAATTACTTTTCTCTT---CCTAAAAGGTGTAGATACTGC--------TATTTATGGCACAGGGAATGTGATTTAATCTCGCATCTGGTTAATCAGAAGAGCGAGCTTTCTGGACT-GAGGGGATGAACTCTTAAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60046833 729 + 64156825 AACAAAAATTGAAGCCATAGTATGACACAGGATGCTGGAAAGGTACACAGCTGGTGTT--TCCATTTTGATTCTATCTCCCTACCTGTAACTGCTCCCTATTGGGAAGACTTT--GGGTCCTCAC--AGTCAGCTAGCTTTCTTTCAAACTTCGCTTGGAGGGTAACAACAGTGCCAGGAATATCAG-AGTGCCTGATGAATGTGGGTCTGTTTATTAAAGCTTGCTTGAATTGTTTGCTATAACTAGTAAGAGGCACTTTTTATAA--------AAGTGCACATAATAAGGAAAAAAGTTTGAGGTGTTTACCCCAGTGTCAAGGGGCAGTTGATTTGCTGAACGCGTACGGGATTATAGCAGTGAGTGGGATCCTACAGGAAGACATTTGCCTTGAC--------GGAGGTGGGCAGGGGGAGT---CCAGAG-TATTAGCTAGAAGCCATGGCTTTGGACAGGGTAAGGAGCAAGTTGTCCTGAGCCTGG------------GGTGTAGTAGCTGACATCTGTTGGAT-ATTTTATGCAGTGT----GTTGTTAGGTTATATACATACTGTGTATATTTTTAGTGGAAAATTTCATACAGAATAGTAAAATGAATGACATGTACTTAGC----TGGAAAAATTCTAGTGTTAGAAATTTCTTTTCTCTC---CCTAAAAGGTATAGGTACTGA--------TATTTATGGCATAGGGAATGTGATTTAATCTCACATCTGGTTAATCAGAA----GAGCTTTCTGGACT-CAGGATATGAACTCTCAACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55072325 729 + 59248254 aacaaaaattgaagccatagtatgacacaggatgctggaaaggtacacagctggtgtt--tccattttgattctatctccctacctgtaactgctccctATTGGGAAGACTTT--GGGTCCTCAC--AGTCAGCTAGCTTTCTTTCAAACTTCGCTTGGAGGGTAACAACAGTGCCAGGAATATCAG-AGTGCCTGATGAATGTGGGTCTGTTTATTAAAGCTTGCTTGAATTGTTTGCTATAACTAGTAAGAGGCACTTTTTATAA--------AAGTGCACATAATAAGGAAAAAAGTTTGAGGTGTTTACCCCAGTGTCAAGGGGCAGTTGATTTGCTGAACGCGTACGGGATTATAGCAGTGAGTGGGATCCTACAGGAAGACATTTGCCTTGAC--------GGAGGTGGGCAGGGGGAGT---CCAGAG-TATTAGCTAGAAGCCATGGCTTTGGACAGGGTAAGGAGCAAGTTGTCCTGAGCCTGG------------GGTGTAGTAGCTGACATCTGTTGGAT-ATTTTATGCAGTGT----GTTGTTAGGTTATATACATACTGTGTATATTTTTAGTGGAAAATTTCATACAGAATAGTAAAATGAATGACATGTACTTAGC----TGGAAAAATTCTAGTGTTAGAAATTTCTTTTCTCTC---CCTAAAAGGTGTAGGTACTGA--------TATTTATGGCATAGGGAATGTGATTTAATCTCACATCTGGTTAATCAGAA----GAGCTTTCTGGACT-CAGGATATGAACTCTCAACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47174818 731 + 51301725 aaaaaaaattgaagccatAGTATGACACAGGATGCTGGAAAGGTACACAGCTGGTGTT--TCCATTTTGATTCTATCTCCCTACCTGTAACTGCTCCCTATTGGGAAGACTTT--GGGTCCTCACAAAGTCAGCTAGCTTTCTTTCAAACTTCGCTTGGAGGGTGACAACAGTGCCAGGAATATCAG-AGTGCCTGATGAATGTGGGTCTGTTGATTAAAGCTTGCTTGAATTGTTTGCTATAACTAGTAAGAGGCACTTTTTATAA--------AAGTGCACATAATAAGGAAAAAAGTTTGAGGTGTTTACCCCAGTGTCAAGGGGCAGTTGATTTGCTGAACGCGTGTGGGATTATAGCAGTGAGTGGGATCCTACAGGAAGGCATTTGCCTTGAG--------GGAAGTGGGCAAGGGGAGT---CCAGAG-TATTAGCTAGAAGCCATGGCTTTGGACAGGGTAAGGAGCAAGTCGTCCTGAGCCTGG------------GGTGTAGTAGCTGACATCTGTTGGAT-ATTTTATGCAGTGT----GTTGTTAGGTTATATacatattgtgtatatttttagtggaaaatTTCATACAGAATAGTAAAATGAATGACATGTGCTTAGC----TGGAAAAATTCTAGtgttagaaatttcttttctctc---cctaaaAGGTGTAGGTACTGA--------TATTTATGGCATAGGGAATGTGATTTAATCTCACATCTGGTTAATCAGAA----GAGCTTTCTGGACT-CAGGATATGAACTCTCAACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46880179 729 + 50890351 aacaaaaattgaagccatagtatgacacaggatgctggaaaggtatacagctggtgtt--tccattttga---aatctccctacctgtaactgctccctgTTGGGAAGACTTT--GGGTCCTCACAAAGTCAGCTAGCTTTCTTTCAAACTTTGCTTGGAGGGTAACAACAGTGCCAGGAATATCAGAAGTGCCTGATGAATGTGGGTCTATTTATTAAAGCTTGCTTGAATTGTTTGCTATAACTAGTAAGAGGCACTTTTTATAA--------AAGTGCACATAATAAGGAAAAAAGTTTGAGACACTTACCCCAGTGTCAAGGGGCAGTTGATTTGCTGAACGCGTGTGGGATTATAGCAGTGAGTGGGATCCTACAGGAAGGCATTTGCCTTGAG--------GGAGGTGGGCAAGGGGAGT---CCAGAG-TATTAGCTAGAAGCCATGGCTTTGGACAGGGTAAGGAGCAAGTCGTCCTGAGCCTGG------------GGTGTAGTAGCTGACATCTGTTGGAT-ATTTTATGCAGTGT----GTTGTTAGGTTATATACATACTGTGTATATTTTTAGTGGAAAATTTCATACAGAATAGTAAAATGAATGACATGTACTTGGC----TGAAAAAATTCTAGTGTTAGAAATTTCTTTTCTCTC---CCTAAAAGGTGTAGGTACTGA--------TATTTATGGCATAGGGAATGTGATTTAATCTCACATCTGGTTAATCAGAA----GAGCTTTCTGGACT-CAGGATATGAACTCTTAACC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102993270 643 + 122678785 AAAAAAAAT----GCCATGTTACAATTTGGGGTATTGGGAA-------AGATAGTGTTTCTCCATTTTGATCCTATCTCTTTTCCATTAAGTG--------TGCTAAGACTTTCAGTGTCTTCATAAAGTCCTGCAGCTTTCCTTG------CGGGCAAGAGGT---CACGATGCAGAGAATATTGGAAATGACCAAT-AATATGG-------------AGCTTGCTTGAATAG-----------AAATAATGGTTACTTCATAACATCCTCTTTAAGGGAAA---GCAGGGGGGAAAGGGTTGGGCCTTTACCCCA-TGACAAGGT---GTTGATTTGCT--ATGAGTCTGTGGTAATCCCAGTGAGTATGAGCTCTGGGCCAGG-GTTTGCCCCCAGGGTCCT------------AAGGGCAGTCCCCCATGG-AGCCATCT-GGAGCCAT-----------GGACACATAGCAGGGCCTCCTGTGCCTGG------------GG---------------CTGCTGGGTCACTTCTTGCCATGC----ATTGTTAA---AACCACATG----ATAATTTTTTAGTGGAAAACCACAGGTAAAATAGTAAATCGAGTAACAGATACTCAAACACGTGG-------CCAGTTTGGGA-------TTTTTCTCAGGCCTAGAAA--CTAGGTACTGACAGTCTAGTATTATTGGTAAGGAGGGTGGTGTTTAGCCTCAGATCTGACTAGT----A----GGGCTTTTTTGACTGCAGCGGGTTAGCCCTTGACC i canFam3.chr1 I 1810 C 0 e mm10.chr7 3704779 907 + 145441459 I e calJac3.chr22 45464083 19 + 49145316 I a score=241835.000000 s hg38.chr19_GL949747v2_alt 180585 83 + 729520 ACTGTGCTTTGTT-ACGGTG-GTAGTAGCTTAATAGCAGCTGCATTTGGTCTTTTGCAG-----ACTGAGTCCTTGTAAGGAGGTGATTT s panTro4.chr19 59113274 83 + 63644993 ACTGTGCTTTGTT-ACGGTG-GTAGTAGCTTAATAGTAGCTGCATTTGGTCTTTTGCAG-----ACTGAGTCCTTGTAAGGAGATGATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55990653 82 + 60714840 ACTGTGCTTTGTT-ACGGTG-GTAGTAGCTTAATAGTAGCTGCATTTGGTC-TTTGCAG-----ACTGAGTCCTTGTAAGGAGATGATTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102760322 83 - 106955855 ACTGTGCTTTGTT-GCGGTG-GTAGTGGCTTAATAGCAGCTGCACTTGGTCTTTTGCAG-----ACTGAGTCCCTGTAAGGAGATGATTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60047562 84 + 64156825 ACTGTGCTTTGTTAACGGTG-GTAGTAGCTTAATAGCAGCTGCACTTGGTCTTTTGCAG-----ACTGAGTCCTTGTAAGGAGATGATTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073054 84 + 59248254 ACTGTGCTTTGTTAACGGTG-GTAGTAGCTTAATAGCAGCTGCACTTGGTCTTTTGCAG-----ACTGAGTCCTTGTAAGGAGATGATTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47175549 84 + 51301725 ACTGTGCTTTGTTAACGGTG-GTAGTAGCTTAATAGCAGCTGCACTTGGACTTTTGCAG-----ACTGAGTCCTTGTAAGGAGATGATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46880908 82 + 50890351 AC--TGCTTTGTTAACAGTG-GTGGTAGCTTAATAGCAGCTGCACTTGGTCTTTTGCAG-----ACTGAGTCCTTGTAAGGAGATGATTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45464102 80 + 49145316 ACTGTGCTTTGTC-AGGGTG-GGAGGAGCTTAATCGCAGCTGCACTTGCTCTTTTGCAG-----ACTGAGTCGTTGTAAGGAAATCT--- i calJac3.chr22 I 19 C 0 s canFam3.chr1 102993913 82 + 122678785 ATTATG---TGTC-ACTGTGAGTAATGGTTTAGCAACAGCAGCA----GAGTTTTACAGGGGTTACTAAGTCCTTTTGCAGGGATTGTGT i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I a score=178787.000000 s hg38.chr19_GL949747v2_alt 180668 120 + 729520 CCTTTACTCTTGCTAAGAATGTGGAGCGAGGGATG-TATGCTC-----TCAGATGAGGAGGCAGGTGTATTTTGCCCTCCTGTCATCTG-CAGTTTACTATGAATGATGACCTGACAACCATAGGGT s panTro4.chr19 59113357 63 + 63644993 CCTTTACTCTTGCTAAGAATGTGGAGCGAGGGATGTTATGCTC-----TCAGA-----------------------------------------------------------TGACAGCCATAGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55990735 121 + 60714840 CCTTTAGTCTTTCTAAGAATGTGGAGCGAGGGATGTTACATTC-----TCAGATGGGGAGGCAGGTGTATTTTGCCCTCCTGTCAGCTG-CAGTTTACTATGGATGATGACCTGACAACCATAGGGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60047646 122 + 64156825 CCTTTACTGTTGTTAAGAATGTGGAGCGAGGGATGTGACACTC----TTCAGATGAGGAGGCAGGTATATTTTGCCCTCCTGTCACCTG-CACGTTACTATGGATGATGGCCTGACACCCATAGGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073138 122 + 59248254 CCTTTACTGTTGTTAAGAATGTGGAGCGAGGGATGTTACACTC----TTCAGATGAGGAGGCAGGTATATTTTGCCCTCCTGTCACCTG-CACGTTACTATGGATGATGGCCTGACACCCATAGGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47175633 122 + 51301725 CCTTTACTGTTGCTAAGAATGTGGAGCGAGGGATGTTACACTC----TTCAGATGAGGAGGCAGGTATATTTTGCCCTTCTATCACCTG-CAGGTTACTATGGATGATGGCCTGACACCCATAgggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46880990 122 + 50890351 CCTTTACTGTTGCTACGAATGTGGAGCGAGGGATGTTACACTC----TTCAGATGAGGAGGCAGGTATATTTTGCCCTCCTGTCACCTG-CAGGTTACTATGGATGATGGCCTGACACCCATAGGGT i chlSab2.chr6 C 0 I 38 s calJac3.chr22 45464182 99 + 49145316 CATTTACTCTTGCTAAGAATGTGGAGCAAAGGATGTTACATTT-----TCGGGTGTA-------------TTTGCCCTCCTGTCTCCTGCCAGGTTACTATGGA--------TGATAGCCATAGG-- i calJac3.chr22 C 0 C 0 s canFam3.chr1 102993995 106 + 122678785 -CATTTCTCTC-CTGACAATTC----CAGGGAAGGTTCTACTCCTTTTTCAGATGAGAGCAGAGGTGTGTGTGGTCACCTGCCCTCCTT----GGTAAGATGGGTA------TGATCATTAT----- i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e nomLeu3.chr10 102760405 0 - 106955855 C a score=-1423.000000 s hg38.chr19_GL949747v2_alt 180788 12 + 729520 AGTTTGG-ttttt s panTro4.chr19 59113420 12 + 63644993 AGTTTGG-ttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55990856 11 + 60714840 AGtttgt-tttt- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60047768 7 + 64156825 -----GG-Ttgtg i rheMac3.chr19 C 0 I 24 s macFas5.chr19 55073260 8 + 59248254 -----GGTTtgtg i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47175755 7 + 51301725 -----gg-ttttg i papAnu2.chr19 C 0 I 2 s calJac3.chr22 45464281 9 + 49145316 ---CTGG-ttttt i calJac3.chr22 C 0 C 0 s canFam3.chr1 102994101 10 + 122678785 GATTTGC-CTT-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e nomLeu3.chr10 102760405 0 - 106955855 C e chlSab2.chr6 46881112 38 + 50890351 I a score=1260.000000 s hg38.chr19_GL949747v2_alt 180800 15 + 729520 tgtattgttttgttt s panTro4.chr19 59113432 15 + 63644993 tgtattgtttcgttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55990867 11 + 60714840 ----ttgttttgttt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55073272 15 + 59248254 tgtgtgtgtgtgtgt i macFas5.chr19 I 4 I 7 s papAnu2.chr19 47175764 15 + 51301725 tgtgtgtgtgtgtgt i papAnu2.chr19 I 2 I 7 s calJac3.chr22 45464290 5 + 49145316 ----------tgtgt i calJac3.chr22 C 0 C 0 s canFam3.chr1 102994111 8 + 122678785 -----TGGATTGT-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e nomLeu3.chr10 102760405 0 - 106955855 C e chlSab2.chr6 46881112 38 + 50890351 I e rheMac3.chr19 60047775 24 + 64156825 I a score=9133.000000 s hg38.chr19_GL949747v2_alt 180815 5 + 729520 tgtga s panTro4.chr19 59113447 5 + 63644993 tgtga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55990878 5 + 60714840 tgtga i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60047799 5 + 64156825 tgaga i rheMac3.chr19 I 24 C 0 s macFas5.chr19 55073294 5 + 59248254 tgaga i macFas5.chr19 I 7 C 0 s papAnu2.chr19 47175786 5 + 51301725 tgtga i papAnu2.chr19 I 7 C 0 s calJac3.chr22 45464295 4 + 49145316 -gtga i calJac3.chr22 C 0 C 0 s canFam3.chr1 102994119 4 + 122678785 -GTGA i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e nomLeu3.chr10 102760405 0 - 106955855 C e chlSab2.chr6 46881112 38 + 50890351 I a score=393117.000000 s hg38.chr19_GL949747v2_alt 180820 193 + 729520 cagggcctcactc-tgtcgcccaggctggagtgcagtggccccatctcaggtcactgcaacctccgcctcctgggttcaagcagttttccttcctcagcctcctgaatagctgggattacaggcagtgcgccaacggcctggctaatttttcgtaatcttagtggagacgggctttcgccatgttggccgggct s panTro4.chr19 59113452 193 + 63644993 cagggcctcactc-tgtcgcccaggctggagtgcagtggccccatctcaggtcactgcaacctccgcctcctgggttcaagcagttttccttcctcagcctcctgaatagctgggattacaggcagtgcgccaacggcctggctaatttttcgtaatcttagtggagacgggctttcgccatgttggctgggct i panTro4.chr19 C 0 I 14 s ponAbe2.chr19 55990883 193 + 60714840 cagggtctcactc-tgttgcccaggctggagtgcagtggccccatctcaggtcactgcaacctccgcctcctggattcaagcagttttccttcctcagcctcctgaatagccgggattacaggcagtgcgccaacagcctggctaatttttcgtaatcttggtggagacggggtttcgccatgttggccaggcc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60047804 193 + 64156825 caggatctcactc-tgtttcccaggctggagtgcagtggtcccatctcaggtcactgcaacctccgcctccagggttcaagcaattttctttcctcagcctcctaaatagctgggattacaggcagtgtgccaacagcctggctaattttttgtatttttagtggagacagggtttcggcatgttggccaggtt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073299 193 + 59248254 caggatctcactc-tgtttcccaggctggagtgcagtggtcccatctcaggtcactgcaacctccgcctccagggttcaagcaattttctttcctcagcctcctaaatagctgggattacaggcagtgtgccaacagcctggctaattttttgtatttttagtggagacagggtttcggcatgttggccaggtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47175791 193 + 51301725 caggatctcactc-tgtttcccaggctggagtgcagtggtcccatctcaggtcactgcaacctccgcctccagggttcaagcaattttctttcctcagcctcctgaatagctgggattacgggcagtGTGCCaacagcctggctaattttttgtatttttagtggagacagggtttcggcatgttggccaggtt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46881150 193 + 50890351 caggatctcactc-tgtgtcccaggctggagagcagtggtcccatctcaggtcactgcaacctccgcctccagggttcaagcaattttctttcctcagcctcctgaatagctgggattacaggcagtgtgccaacagcctggctaattttttgtatttttagtggagacagggtttcggcatgttggccaggtt i chlSab2.chr6 I 38 C 0 s calJac3.chr22 45464299 187 + 49145316 caaggtttcactcttgtcatccaggctggagtgcagtggctccatctcaggtcacagcaacctctgcctgc-gggttaaagtgattttcctacctcagcctcctgaatagctgggattacaggca-tacaccaacagcctggctcattatttgtatttttagtagacctggggtttcgccatgttgccc----- i calJac3.chr22 C 0 C 0 s canFam3.chr1 102994123 52 + 122678785 ---------------------------GGACCGCAGAGGTTACAC------------------------------------------------------------AGTGGCTGC------------TATGTTAA----------AATCTTTTAT--------------CAGAATT------------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e nomLeu3.chr10 102760405 0 - 106955855 C a score=14689.000000 s hg38.chr19_GL949747v2_alt 181013 18 + 729520 ggtctctcaaactcctga s ponAbe2.chr19 55991076 18 + 60714840 ggtctctcaaactcctga i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60047997 16 + 64156825 gg--tctcaaactcccgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073492 16 + 59248254 gg--tctcaaactcccga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47175984 16 + 51301725 gg--tctcaaactcccaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46881343 16 + 50890351 gg--tctcaaactcctaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45464486 8 + 49145316 ----------actcctga i calJac3.chr22 C 0 C 0 s canFam3.chr1 102994175 9 + 122678785 ---------GGTTCTTAA i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e nomLeu3.chr10 102760405 0 - 106955855 C e panTro4.chr19 59113645 14 + 63644993 I a score=179010.000000 s hg38.chr19_GL949747v2_alt 181031 107 + 729520 cctcaagtgatccgtctcggactcccgaagtgctgggattacaggtgtgagccaccactcccagccCGTAGGGTGGTTTTGACAGTGACATGGGTCACGGTGA-TGGC s ponAbe2.chr19 55991094 108 + 60714840 cctcaagtgatctgtctcgggctcccaaagtgctgggattacaggtgtgagccaccgcgcccggccCGGAGGGTGGTTTTCACAGTGACATGGCTcacagtgactggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102760405 102 - 106955855 cctcacgtgatccgt------ctcccagagtgctgggattacaggtgtgagccaccacgcccagccCATAGGGTGGTTTTGACAGTGACATGGGTCACGGTGACTGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60048013 108 + 64156825 cctcaagtgatccatctcacactcccaaagtgctgggattacaggcgtgagccaccacgcccagccCATAGGATAGTTTTGACAGTGATATGGGTCACAGTGACTGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073508 108 + 59248254 cctcaagtgatccatctcagactcccaaagtgctgggattacaggcgtgagccaccacgcccagccCATAGGATAGTTTTGACAGTGATATGGGTCACAGTGACTGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47176000 108 + 51301725 cctcaagtgatccatctcagactcccaaagtgctgggattacaggcatgagccaccacgcccagcccatagGATAGTTTTGACAGTGATACGGGTCACAGTGACTGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46881359 108 + 50890351 cctcaagtgatccatctcagactcccaaagtgctgggattacaggcgtgagccaccacgcccagccCATAGGATAGTTTTGACAGTGATACGGGTCACAGTGACTGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45464494 60 + 49145316 ----------------------cctcaAAGTGTTGGGATTACAAGCATG--------------------------GTTTTGACGATGGCCTGGGTCACAGTGACTGGT i calJac3.chr22 C 0 I 27 s canFam3.chr1 102994184 33 + 122678785 ---------------------CTTC-----TGCTCGTATCACAG--------CTCCA----------------------TGATAATGGA------------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e panTro4.chr19 59113645 14 + 63644993 I a score=165718.000000 s hg38.chr19_GL949747v2_alt 181138 69 + 729520 GCT-GTACTACTTGTGCCTCACCGCCGCGGCATGGagctac-caagaggcggagccaggatttgaacccaa s panTro4.chr19 59113659 69 + 63644993 GCT-GTACTACTTGTGCCTCACCACCGCGGCATGGagctac-caagaggtggagccaggatttgaacccaa i panTro4.chr19 I 14 C 0 s ponAbe2.chr19 55991202 64 + 60714840 gct-gtactacttgtg-----ccaccgtgacgcggagctac-caagaggtggagccaggatttgaacccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102760507 69 - 106955855 GCT-GTACTACCTGTGCCTCACCACCACGACATGGAGCTAC-CAAGAGGTGGAACAAGGATTTGAAGCCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60048121 70 + 64156825 GCTAATACTACCTGTGCCTCACCACCGTGACATGGagctac-gaagaggtggagccaggatttgaacccaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073616 70 + 59248254 GCTAATACTACCTGTGCCTCACCACCGTGACATGGagctac-gaagaggtggagccaggatttgaacccaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47176108 69 + 51301725 GCTAATACTACCTGTGTCTCACCACCGTGACATGGAGCTAC-GAAGAGGTGGAGCCAGAA-TTGAACCCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46881467 70 + 50890351 GCTAATACTACCTGTGCCTCACCACCGTGACATGGGgctac-gaagaggtggagccaggatttgaacccaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45464581 66 + 49145316 ACTAATACTACC-GTGCCTCACCACCGCAA-ATGGAGC--C-taagaggacgagccaggatttgaacccaa i calJac3.chr22 I 27 C 0 s canFam3.chr1 102994217 28 + 122678785 ------------------------------------GCTCCTCAAGAGGT-------GGGTTTGAATCCAA i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I a score=2257962.000000 s hg38.chr19_GL949747v2_alt 181207 532 + 729520 gAAGCCTGAGGTCAGAAGGCGGAATCAGTGTTTCCTCCCACTCTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATAGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCACGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCGGATGGGCACCTGAATCTTCCTCCACCTGCCCCT-CTGATGGTTGCCCTCACTAAGCCTGCTGTCCCTATCTCCTATGCAGCCCTCGGAGGTGAT--GGGTGTGAACTCACCC-AGAGGGTACAGATTCAC-CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCTTGC----CCCAATAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA s panTro4.chr19 59113728 532 + 63644993 gaagcctgaggtcagaAGGCTGAATCAGTGTTTCCTCCCACTCTTCCCAGGCAATGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATAGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCACGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCGGATGGGCACCTGAATCTTCCTCCACCTGCCCCT-CTGATGGTTGCCCTCACTAAGCCTGCTGTCCCTATCTCCTATGCAGCCCTCGGAGGTGAT--GGGTGTGAATTCACCC-AGAGGGTACAGATTCAC-CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCATGC----CCCAATAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55991266 533 + 60714840 gaagcctgaggtcagaaggctgagtccgtgtgtccttccactCTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATAGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCACGCTCGCGTGCTGATCCGCCAGCGCCACATCAGGTACCACCTCTGATGGGCACCTGAATCTCCCTCCACCTGCCTCT-CTGATGGTTGCCCTCACTAAGCCTGCTGTCCCCATCTCCTATGCAGCCCTCGGAGGTGAT--GGGTGTGAACTCACCC-AGAGGGTACAGATTCAC-CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCGTGC----CCCAATAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCACGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGAGGGGAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102760576 532 - 106955855 GAAGCCTGAGGTCAGAAGGCTGAATCAGTGTTTCCTCCCACTCTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATAGAGGATTTCTTAGAGAGACGCCTACAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCACGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCTGATGGGCACCTGAATCTTCCTCCATCTGCCCCT-CTGATGGTTGCCCTCACTAAGCCTGCTGTCCCTATCTCCTATGCAGCCCTTGGAGGTGAT--GGGTGTGAACTCACCC-AGAGGGTACAGATTCAC-CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCCTGC----CCCAATAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60048191 530 + 64156825 gAAGCCGGAGGTCAGAAGGCTGAATCAGTGCTTCCTCCCACTGTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATCGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCATGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCTGATGGGCGCCCAAACCTTCCTCCGCCT-CCCCT-CTGGTGGCTGCCCTCACTAAGCCTGCTGT-CCTATCTCCTATGCAGCCCTCGGAAGTGAT--GGGTGTGAGCTCACCC-AGAGGGTACAGATTCAC-CCTTGCACACAGCTCACCAGGGAGTTGGGGCAGCCTCATGC----CCCACTAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073686 529 + 59248254 gAAGCCGGAGGTCAGAAGGCTGAATCAGTGCTTCCTCCCACTGTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATTCTGGGCCTGAAGATCGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCATGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCTGATGGGCGCCCGAACCTTCCTCCGCCT-CCCCT-CTGGTGGCTGCCCTCACTAAGCCTGCTGT-CCTATCTCCTATGCAGCCCTCGGAAGTGAT--GGGTGTGAGCTCACCC-AGAGGGTACAGATTCA--CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCATGC----CCCACTAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47176177 530 + 51301725 GAAGCCTGAGGTCAGAAGGCTGAATCAGTGCTTCCTCCCACTCTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATCGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCATGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCTGATGGGCGCCCGAAccttcctccacct-cccct-cTGGTGGCTGCCCTCACTAAGCCTGCTGT-CCTATCTCCTATGCAGCCCTCGGAAGTGAT--GGGTGTGAGCTCACCC-AGAGGGTACAGATTGAC-CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCATGC----CCCAATAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46881537 530 + 50890351 gaagcctgaggtcagaAGGCTGAATCAGTGCTTCCTCCCACTCTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATCGAGGATTTCTTAGAGAGGCGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCATGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCTGATGGGCGCCCGAACCTTCCTCCGCCT-CCCCT-CCGGTGGGTGCCCTCACTAAGCCTGCTGT-CCTATCTCCTATGCAGCCCTCGGAAGTGAT--GGGTGTGAGCTCACCC-AGAGGGTACAGATTCAC-CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCATGC----CCCAATAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45464647 529 + 49145316 gaagtctgaggtcagaa-gctgAATCCGGGCTTCCTTCTACTCTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATTGAGGATTTCTTAGAGAGACGTCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCACGCACGTGTACTGATCCGCCAGCGCCATATCAGGTATCACCTCTTGTGGGCGCCCAAAGCTTCCTCCACGCTGCTCT-CTGATGGTTGCCCTCACTAAGCCTGCTGTCCCTATCTCC--TGCAGCCCTTGGAGGCGAT--GGGTGTGAGCTCACCC-TGAGGGTACAGATTCAC-CCTTGCACACAGCTCACGCGGGAGCTGGGGCAGCCTCATGT----CCCAAAAGCCCAGCGCAAGGGTCACTGCGGCTCCAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGCC---TCCCCGGTGGA-GGGAGA i calJac3.chr22 C 0 C 0 s mm10.chr7 3705686 531 + 145441459 GAAGTCTGAGGTCGG---GCCTCATTGGCTGCTGCTCCCCCTG-TCACAGGCAATGCTCTCCTGCGGCGGCTTGTTCGCATTGGGGTGCTGGACGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATTGAGGATTTCTTGGAGAGGCGGCTGCAGACCCAGGTCTTTAAGCTGGGCCTGGCCAAATCTATTCACCATGCCCGTGTGCTCATCCGCCAACGTCACATTAGGTG-AGTTGCAGCTGGGCCTGTAAATCTTTATTTCCCTACTTGTGCCGTTGGTTTCGTTAGCTAAG-TTGCCAT-TCTATCTCCTGTGCAGCCTTTGGAGCTGAC--AGATGTGAGCTTACCCTTGAGGGTTCAGAATCGTGCCCTGCAAACAGCTTATGGGGGACTGGGGACAGCCTTGTTT----CCCCATAGCCCAGCGCAAGGGTCACTGCGGCTCAAGCCGTACACCTTGTGAAGGTGTCTGCCAGGCACTCAAGCAGCTGGACAGGTAACAGCTCTTGGTGCCACCCCCCCTGGA-GGGAGA i mm10.chr7 I 907 I 157 s canFam3.chr1 102994245 518 + 122678785 GATGTCTAAAGT----------GATCAGTGCTTCCTTCCCCTCCTATCAGGTAATGCCCTACTGCGCCGACTTGTACGCATCGGGGTGCTGGATGAGGGCAAAATGAAGTTGGATTACATTCTGGGCCTGAAGATCGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTTAAGCTGGGCTTGGCCAAGTCCATCCACCATGCCCGTGTGCTGATCCGCCAGCGCCATATCAGGTAACACATCTAGGGG---------TCTATCTTCTCCATCCTCC-TTGGTGGTTGCCCTCACTAAGCTTGCTGTCCTTATCCCCTATGCAGCCCTCGGAGGTGACAAAGGTGTGAACACACCT-TGAGGGTACAGATTGAC-ACCTGCAAAGTGCTCATGGGTTGCTGGGGAGAGCCTCATCCCCTGCCCCGTAGCCCAGCGCAAGGGTCACTGCGGCCTAAGCCGTACACCTTGCGAAGGCTTCTA-CAGGCATGCATGCAGCCAGACAGGTAACCGTTCCCGGTG---TGCCTGGTGAA-CAGAGA i canFam3.chr1 C 0 C 0 a score=556289.000000 s hg38.chr19_GL949747v2_alt 181739 195 + 729520 GAACCA----GCCTCACCTCGCTTGGGTG-----GTGGGTTCAGCTGTCTCCTGGCTCGCTTGTGAAGTTGATTCCAGACCCCGATCCATGACTGCGTTCTGGGTACTCAGTGTGCCCTTTCTGTAATGTGGCACCA---------TTGAGGGGGAGGAGCTGTACAGAAAGAGGGCAAGATGTTTGCGTTTAGAATCTTCGCCCCAGCCCTT s panTro4.chr19 59114260 195 + 63644993 GAACCA----GCCTCACCTCGCTTGGGTG-----GTGGGTTCAGCTGTCTCCTGGCTCGCTTGTGAAGTTGATTCCAGACCCCGATCCATGACTGCGTTCTGGGTACTCAGTGTGCCCTTTCTGTAATGTGGCACCA---------TTGAGGGGGAGGAGCTGTACAGAAAGAGGGCAAGATGTTTGCGTTTAGAATCTTCGCCCCAGCCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55991799 195 + 60714840 GAACCA----GCCTCACCTCGCTTGGGTG-----GTGGGTTCGGCTGTCTCCTGGCTTGCTTGTGAAGTCGATTCCAGACCCTGATCCATGACTGCGTTCTGGGTACTCAGTGTGCCATTTCTGTAACGTGGCACCA---------TTGAGGCGGAGGAGCTGTACAGAAAGAGCGCAAGATGTTTGCGTTTAGAATCTTCGCCCCAGCCCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102761108 195 - 106955855 GAACCA----GCCTCACCTCGCTTGGGTG-----GTGGGTTCAGCTGTCTCCTGGCTCTCTTGTGAAGTTGATTCCAGACCCTAATCCATGACTGCATTCTGGGTACTCAGTGTGCCCCTTCTGTAACGTGGCACCA---------TTGAGGGGGAGGAGCTGTACAGAAAGAGGGCAAGATGTTTGCGTTTAGAATCTTCGCCCCAGCCCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60048721 195 + 64156825 GAACCA----GCCTCTCCTCGCTTGGGTG-----GTGGGTTCAGCTGTCTCCTGACTCGTTTATGAAGTTGATTCCAGACCCTAATCCATGACTGCTTTCTGGGTACTCAGTGTGCCCTTCCTGTAACGTGGCACCA---------TTGACGGGGAGGAGCTGTACAGGAAGAGGGCAAGATGTTAGCGTTTAGAATCTCCGCCCCAGCCCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55074215 195 + 59248254 GAACCA----GCCTCTCCTCGCTTGGGTG-----GTGGGTTCAGCTGTCTCCTGACTCGTTTATGAAGTTGATTCCAGACCCTAATCCATGACTGCTTTCTGGGTACTCAGTGTGCCCTTCCTGTAACGTGGCACCA---------TTGACGGGGAGGAGCTGTACAGGAAGAGGGCAAGATGTTAGCGTTTAGAATCTCCGCCCCAGCCCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47176707 194 + 51301725 GAACCA----GCCTCTCCTCGCTCGGGTG-----GTGGGTTCAGCTGTCTCCTGACTCGTTTATGAAGCTGATTCCAGACCCTAATCCATGACTGCTTTCTGGGTACTCAGTGTGCTCTT-CTGTAACGTGGCACCA---------TTGACGGGGAGGAGCTATACAGGAAGAGGGCAAGATGTTAGCATTTAGAATCTCCTCCCCAGCCCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46882067 195 + 50890351 GAACCA----GCCTCTCCTCGCTTGGGTG-----GTGGTTTCAGCTGTCTCCTGACTCGTTTATGAAGTTGATTCCAGACCCTAATCCATGACTGCTTTCTGGGTACTCAGTGTGCCCTTTCTGTAACGTGGCACCA---------TTGACGGGGAGGAGCTACACAGGAAGAGGGCAAGATGTTAGCATTTAGAATCTCTGCCCCAGCCCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45465176 191 + 49145316 GAACCA----GCCT--CCTCACTTGGGTG-----GTGGGTTCAGCTGTCTCCTGGCTCTCTTGTTAAGTCAGTTCCAGACCGTAAGCTGTGAGTGCGTTCTGGGTACTCGG-GTGCCCTTTCTGTAACATGGCACCA---------TTGAGAGGGAGGAGCTGTGCAGG-AGAGGCCACGACGTTTACATGTAGAATATCCACCTCAGCCCTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102994763 168 + 122678785 -AGTCATTGGATCTCTACTGGTTTGGGTGGGTGTGTGGGTTCAGTTG------GGCCCACTTGTGGAATC-ATTCAGGAGCCTGGT-GGTTATCGTGTCCTG---ACACACTGT-CCGTGTTGGTGAGTTGACCACAGTCCATGGTCTGATGGTCAAGTGCTG----------GGGC---CTGTGGGAGTCTGG------------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3706217 157 + 145441459 I a score=704981.000000 s hg38.chr19_GL949747v2_alt 181934 326 + 729520 CACTAACCCTGTGAGCCGTAGGCAGA---GCCTTGTGTGT-CAATGCT----------TTCGTCGGA-GACG--TAGCCTCGGGTTGCTGTGTTATTGTGGGCATTGCTGCTGCACGT------GGTAATACAGCTCAGTGTCAGGTGTGGGGTTCACGATA--TTTCAGACTCGGAACTTGGGGGCTCTCACATGGCCATCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTTTCAGATT------TCTCCTATAAAATGGGGT---TGAGAAAGTCATC----TGAAGCATT--TTT--GGGGATTAAGGTGATACCCTAAAACCCCGG------AGGGCGCACGTAGGATCAGGTGCACCCTTCCTGCAGC s panTro4.chr19 59114455 328 + 63644993 CACTAACCCTGTGAGCCGTAGGCAGA---GCCTTGTGTGT-CAATGCT----------TTCGTCGGA-GACGCGTAACCTCGGGTTGCTGTGTTATTGTGGGCATTGCTGCCGCACGT------GGTAATACAGCTCAGTGTCAGGCGTGGGGTTAACAATA--TTTCAGACTCGGAACTTGGGGGCTCTTACACGGCCATCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTATCGGATT------TCTCCTATAAAATGGGGT---TGAGAAAGTCATC----TGAAGCATT--TTT--GGGGATTAAGGTGATACCCTAAAACCCCGA------AGGGTGCCCGTAGGATCAGGTGCACCCTTCCTGCAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55991994 326 + 60714840 CACTAACCCTGTGAGCCATAGGCAGA---GCCTTGTGTGT-CAGTGCT----------TTCGTCGGA-GACG--TAGCCTCGGGTTGCCGTGTTATTGTGGGCATTGCTGCCGCACGT------GGTAATACAGCTCAGTGTCAGGTGTGGGGTTCAGGATA--TTTCAGACTCGGAACTTGGGGGCTCTTACACGGCCATCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTTTCGGATT------TCTCCTATAAAATGGGGT---TGAGAAACTCATC----TGAAGTATT--TTG--GGGGATTAAGGTGATACCCTAAAACCCCGA------AGGGTGCCCATAGGATCAGGTGCACCCTTCCCGCAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102761303 326 - 106955855 CACGAACCCTGTGAGCCGTAGGCAGA---GCCTTGTGTGT-CAGTGCT----------TTCGTCGGA-GACG--TAGCCTCGGGTTGCTGCGTTATTGTGGGCATTGCTGCCGCGCGT------GGTAATACAGCTCAGTGTCAGGCGTGGGGTTCAGGATG--TTTCAGACTCGGAACTTGGGGGTTCTTACACGGCCACCTCATTTGCTTTGTAGTCTTAGGT------GGGAT-----------------------------GCTTTTGAATT------TCTCCTATAAAATGGGGT---TGAGAAACTCATC----TGAAGCATT--TTT--GGGGATTAAGGTGATACCCTAAAACCCCGA------AGGGTGCCCATAGGATCAGGTGCACCCTTCCCGCAGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60048916 315 + 64156825 CACTAAGCCTGTGAGCCGCAGGCAGA---GCCTCGTGTGT-CAGCG----------------------------TAGCCCCGGGTTGCTGTGCTGTTGTGGGCATTGCTGCCGCACGT------GGTAATGCAGCTCAGTGTCAGGCGTGGGGTTCAGGATG--TTTCAGACTCGGAACTT--GGGCTCTTATTCGGCCACCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTTTTGAGTT------TCTCCTAGAAAATGTGGT---TGAGAAACTCACC----TGAAGCGTT--TTT--GGGGGTTAAGGTGATACCCTCAAACCCTGGACTCACATGAGGCCCATAGGATCAGGAGCGCCCTTCCCACAGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55074410 315 + 59248254 CACTAAGCCTGTGAGCCGCAGGCAGA---GCCTCGTGTGT-CAGCG----------------------------TAGCCCCGGGTTGCTGTGCTGTTGTGGGCATTGCTGCCGCACGT------GGTAATGCAGCTCAGTGTCAGGCGTGGGGTTCAGGATG--TTTCAGACTCGGAACTT--GGGCTCTTATTCGGCCGCCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTTTTGAGTT------TCTCCTAGAAAATGTGGT---TGAGAAACTCACC----TGAAGCATT--TTT--GGGGGTTAAGGTGATACCCTCAAACCCTGGACTCACATGAGGCCCATAGGATCAGGAGCGCCCTTCCCACAGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47176901 315 + 51301725 CACTAAGCCTGTGAGCCGCAGGCAGA---GCGTCGTGTGT-CAGCG----------------------------TAGCCCCGGGTTGCTGTGCTGTTGTGGGCATTGCTGCCGCACGT------GGTAATGCAGCTCAGTGTCAGGCGTGGGGTTCAGGATG--CTTCAGACTCGGAACTT--GGGCTCTTCTTCGGCCACCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTTTTGAATT------TCTCCTAGAAAATGTGGT---TGAGAAACTCACC----TGAAGCATT--TTT--GGGGGTTAAGGTGATACCCTCAAACCCTGGACTCACATGAGGCCCATAGGATCAGGAGCGCCCTTCCCACAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46882262 314 + 50890351 CACTAAGCCTGTGAGCCGCAGGCAGA---GCCTCGTGTGT-CAGTG----------------------------TATCCCCGCGTTGCCGTGCTTTTGTGGGCATTGCTGCTGCACCT------GGTAATGCAGCTCAGTGTCAGG-ATGGGGTTCAGGATG--TTTCAGACTCGGAACTT--GGGCTCTTATTCAGCCACCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTTTTGAATT------TCTCCTAGAAAATGTGGT---TGAGAAACTCATC----TGAAGCATT--TTT--GGGGATTAAGGTGATACCCTCAAACCCTGGACTCACATGAGGCCCATAGGATCAGGAGCGCCCTTCCCACAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45465367 307 + 49145316 CACTAACCCTGTGAGCCGTGGGCAGA---GCCTTCTGTGTGTGACGCC----------TTCACTGTG-GACA--TAGCCTCAGGTTGCTGTGTTACAGTGGGCATTGCTGCCGTGTGT------GGTCA---AGCTCAGTGCCAGGTGTGGGGTTGAG--TG--TTTCACACTTCGGACTT--------TTAAT--GCCACCTCATTTGCGTTGTGGTCTTATGT------GGGAT-----------------------------ACTTTTGAATT------TCTCCT---AAATGTGGT---TGAGA--------------AAGCATT--TTTGGGGGGGTGAAGGTGATGCCCTAAGACCCTGGACTCACATGAGGCCCACAGGATCAGGAGCGCCCTTCCGGCAGT i calJac3.chr22 C 0 C 0 s mm10.chr7 3706374 194 + 145441459 CACCAATCATGACAGCTATACA-------------------GAGTG----------------------------AAGTCTCAGATTTCTTTCTCACCA--------GCTTTCGTTTAT------GG---------------------GCAGAGAT----------------------------GTACTCTT--------GTCTGAGGTGGTTTGAGACC--ACAT------GGCAT-----------------------------------------------------TACAATGTGGA---CAGGAAGCAAATC-----AAAGCATTAGTAT--GGGCACTCTTGTTTTCCTTCCAAGTTACTGAGTC------------TGAGGTCAGG--------------AGT i mm10.chr7 I 157 C 0 s canFam3.chr1 102994931 383 + 122678785 --CTGGCTCAAGAAGACA-GGGCAGATGGGTCTTTTATCT-GGGTGCTCAGTTTGACCTTTGTCAGATTTTG--TAGACTGGAGTCTCAG----GTGAAGGACAGTAAGGCTGCTCCTTAGATAGATAGTAAAGCCCAGTGTCTGGCAC--ACTTCACTTTGAAAATCAGACCCTGGAATTACTGGCTGCCACT-GGCTCCCCTCCTTCCTTTGTGGTCTTGAGTTCCTCCTGAATGCATCCACAATGCAAACCAGAAGCTCCACACGTTTGAGTTCAGTGATATTCTAAAACTTgggatccctgggtggcgcagcggtttggcgcctg--cct--ttggcccagggcgtgatcctgaagacccgggatc----gaatcccac---atcggg--ctccctgcatggagc i canFam3.chr1 C 0 I 159 a score=234579.000000 s hg38.chr19_GL949747v2_alt 182260 96 + 729520 GCCTTGGTGTCT------------GCAGCCGTGGCGGCCTCACGGGGTGGGTGGAGAGGAAAGAGTGGTGCGGTAGCTGGGGTTAGCGTCCGTTTCTCCTCCAGTCCA s panTro4.chr19 59114783 96 + 63644993 GCCTTGGTGTCT------------GCAGCCATGGCAGCCTCACGGGGTGGGTGGAGAGGAAAGAGTGGTGCCGTAGCTGGGGTTGGCGTCCGTTTCTCCTCCAGTCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55992320 96 + 60714840 GCCTTGGTGTCT------------GCGGCCATGGCAGCCTCACGGGGTGGGTGAAGAGGAAAGAGTGGTGGCTTAGCTGGGGTTAGCGTCCGCTTTTCCTCCAGTCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102761629 93 - 106955855 GCCTTGGTGTCT------------GCAGCCATGGCAGCCTCACAGCGTGGGTGAAGAGGAGAGAGTGGTGCCTTAGCTGGGGTTAGCGTCCGTTT---CTCCAGTCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60049231 96 + 64156825 GCCTCCGTGTCT------------GTGGCCATGGCAGCCTCATGGGGTGGGTGAAGAGGAGAGAGTGGTGCCTGAGCTGGGGTTAGCATCCGTTTCTCCTCCAGTCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55074725 96 + 59248254 GCCTTGGTGTCT------------GTGGCCATGGCAGCCTCATGGGGTGGGTGAAGAGGAGAGAGTGGTGCCTGAGCTGGGGTTAGCATCCGTTTCTCCTCCAGTCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47177216 96 + 51301725 GCCTCGGTGTCT------------GTGGCCATGGCAGCCTCACGGGGTGGGTGAAGAGGAGAGAGTGGTGCCTGAGCTGGGGTTAGCATCCGTTTCTCCTCCAGTCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46882576 96 + 50890351 GCCTCGGTGTCT------------GTGGCCATGGCAGCCTCACGGGGTGGGTGAAGACGAGAGAGTGGTGCCTGAGCTGGGGTTAGCGTCTGTTTCTCCTCCAGTCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45465674 99 + 49145316 GCCTGGGTGTCTGCAACCCTAGCAGCAGCCGTGGCCACCTCACGGGCTGAGTGAAGAGGAGA----GGCACCTC-GCTGGGCTT-GCTTCATTCT---CCCCGGTCCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3706568 59 + 145441459 GCCTGTGAGCCT------------GC----------------TTGAGTCAAAGGGCAGGACCAAATGGT-------------TCAGCCTCACTTT--------GTCCC i mm10.chr7 C 0 C 0 e canFam3.chr1 102995314 159 + 122678785 I a score=1212966.000000 s hg38.chr19_GL949747v2_alt 182356 293 + 729520 CCTCACCTTGTCG--CTTCTTCCAGGGTCCGCAAGCAGGTGGTGAACATCCCGTCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCTCTGCGCTCTCCCTACGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAATGCCAAGAAGGGCCAGGGTGGGGCTGGGGCTGGAGACGACGAGGAGGAGGATTAAGT-CCACCTGTC--CCTCCT-----GGGCTGCTG------GATTGTCTCGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------ATTGGTGTGTGGGGGTCT-CTC s panTro4.chr19 59114879 293 + 63644993 CTTCACCTTGTCA--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAACATCCCATCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCTCTGCGCTCTCCCTACGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAATGCCAAGAAGGGCCAGGGTGGGGCTGGGGCTGGAGACGACGAGGAGGAGGATTAAGT-CCACCTGTC--CCTCCT-----GGGTTGCTG------GATTGTCTCGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------ATTGGTGTGTGGGGGTCT-CTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55992416 293 + 60714840 CTTCACTTTGTCG--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAACATCCCGTCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCTCTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCTGGGGCTGGAGACGACGAGGAGGAGGATTAAGT-CCACCTGTC--CCTCCT-----GGGCTGCTG------GATTGTCTCGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------ATTGGTGTGTGGGGGTCT-CTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102761722 299 - 106955855 CTTCACTTTGTCA--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAACATCCCGTCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCTCTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGTGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCTGGGGCTGGAGACGACGAGGAGGAGGATTAAAC-CCACTTGTC--CCTCCT-----GGGCTGCTGGATTGTGATTGTCTTGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------ATTGGTGTGTGGGGGTCT-CTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60049327 293 + 64156825 CTTCACTTTGTCG--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAATATCCCGTCGTTCATTGTCCGCCTGGATTCCCAGAAGCACATTGACTTCTCCCTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCCGGGGCTGGAGACGACGAGGAGGAGGATTAAGC-CCAGCTTTC--CCTCCT-----GGGCTGCTG------GATTGTCTAGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------ATTGGTGTGTGTGGGTGT-CTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55074821 293 + 59248254 CTTCACTTTGTCG--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAATATCCCGTCGTTCATTGTCCGCCTGGATTCCCAGAAGCACATTGACTTCTCCCTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCCGGGGCTGGAGACGACGAGGAGGAGGATTAAGC-CCACCTTTC--CCTCCT-----GGGCTGCTG------GATTGTCTAGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------ACTGGTGTGTGTGGGTGT-CTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47177312 293 + 51301725 CTTCACTTTGTCG--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAATATCCCATCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCCCTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCCGGGGCTGGAGACGACGAGGAGGAGGATTAAGC-CCACCTTTC--CCTCCT-----GGGCTGCTG------GATTGTCTAGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------Gttggtgtgtgtgggtgt-ctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46882672 293 + 50890351 CTTCACTTTGTTG--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAATATCCCGTCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCCCTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCTGGGGCTGGAGACGACGAGGAGGAGGATTAAGC-CCACCTTTC--CCTCCT-----GGGCTGCTG------GATTGTGTAGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------GTTGGTGTGTGTGGTTGT-CTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45465773 297 + 49145316 CTTAACC-CGTCC--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAACATCCCGTCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCCCTCCGCTCTCCCTACGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAATGCCAAGAAGGGTCAGGGCGGGGCTGGGGCTGGGGATGACGAGGAGGAGGATTAAGC-CCACCTGTCCGCCTCTG-----GGGCTCGTG------GATTGCCGAGTTTTCCTGCT---GAATAAACAGGATCAGCGCTTTATATA-------CTTGGTGTGTTTGTGTCTCCTC i calJac3.chr22 C 0 C 0 s mm10.chr7 3706627 286 + 145441459 CTTATTCTGTTCT--TCCTGTCCAGGGTCCGCAAGCAGGTGGTGAACATCCCATCCTTCATTGTTCGCCTGGACTCTCAGAAGCACATCGACTTCTCCCTCCGTTCTCCTTATGGCGGCGGCCGTCCAGGCCGAGTGAAGAGGAAGAATGCCAAGAAAGGCCAGGGCGGGGCTGGAGCTGGTGATGATGAGGAAGAGGATTAATTAATACTTGGC-------T-----GAACTGGAG------GATTGTCTAGTTTTCCAGCTGAAAAATAAAAAAGA------ATT--GATA-------CTTGGTTTATTGGTGTGC-CTC i mm10.chr7 C 0 I 5733 s canFam3.chr1 102995473 303 + 122678785 CCTCACC-TGCCATCCCCCCTCCAGGGTCCGAAAGCAGGTAGTGAACATCCCGTCCTTCATTGTCCGCCTGGACTCCCAGAAGCACATCGACTTCTCCCTCCGTTCTCCGTATGGGGGTGGCCGCCCAGGCCGCGTGAAGAGGAAGAATGCCAAGAAGGGCCAGGGTGGGGCTGGAGCCGGTGATGACGAAGAGGAGGACTGAAC-CCACCCTTC--CATCCCTTTCAGGGCCCGTG------GATTATCTAGTTTTCTAGGC---CAATAATAA--AACAGTGTTT--TGGAATCGTTTATTGGTTTATTGGTGTGT-CT- i canFam3.chr1 I 159 C 0 a score=61115.000000 s hg38.chr19_GL949747v2_alt 182649 59 + 729520 ATCCTTGACTCTTTCCCCTGCTCTAAACATGCAGCCTTCCCTGGGA--------------GGCTCAC----------TCACTT---- s panTro4.chr19 59115172 58 + 63644993 CTCTTTGACTCTTTCCCC-GCTCTAAACATGCAGCCTTCCCTGGGA--------------GGCTCAC----------TCACTT---- i panTro4.chr19 C 0 I 13 s ponAbe2.chr19 55992709 59 + 60714840 CTCCTAGACTCTTTCCCCTGCTGTAAACATGCAGCCTTCCCTGGGA--------------GGCTCAC----------TCACTT---- i ponAbe2.chr19 C 0 I 733 s nomLeu3.chr10 102762021 29 - 106955855 CTC---GGCTCACTCTCT-------------------TCCGGGTGA--------------TACTT---------------------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60049620 48 + 64156825 CTT---GACTC--TCCCCTGCTCTGAACATGCAGCCTTCCCTGGGA--------------GGCTCAG-------------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55075114 48 + 59248254 CTT---GACTC--TCCCCTGCTCTGAACATGCAGCCTTCCCTGGGA--------------GGCTCAG-------------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47177605 48 + 51301725 CTT---GACTC--TCCCCTGCTCTGAACATGCAGCCTTCCCTGGGA--------------GGCTCAG-------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46882965 48 + 50890351 CTT---GCCTC--TCCCCTGCTCTGAACATGCAGCCTTCCCTGGGA--------------GGCTCAG-------------------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45466070 66 + 49145316 CTT---GACTCTTAACCCTGCTCTGACCTTGCCGCCTTTCCTAGGA--------------AGCTTGGGGCAGCTCACTCGCTT---- i calJac3.chr22 C 0 I 18 s canFam3.chr1 102995776 60 + 122678785 ---------------CCCTGTTCTGAACATACAGC--TCCCTGTGGTGGGAAAAAATGATGGCTGGG----------TCCTCCAACC i canFam3.chr1 C 0 C 0 e mm10.chr7 3706913 5733 + 145441459 I a score=33766.000000 s hg38.chr19_GL949747v2_alt 182708 13 + 729520 GGGAGTGCCTACC- s panTro4.chr19 59115243 13 + 63644993 GGGAGTGCCTACC- i panTro4.chr19 I 13 C 0 s ponAbe2.chr19 55993501 13 + 60714840 GGGAGTGCCTACC- i ponAbe2.chr19 I 733 C 0 s nomLeu3.chr10 102762050 13 - 106955855 GGGAGTGCCTACC- i nomLeu3.chr10 C 0 M 276 s rheMac3.chr19 60049668 13 + 64156825 GAGCGTGCCTACC- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55075162 13 + 59248254 GAGCGTGCCTACC- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47177653 13 + 51301725 GAGCGTGCCTACC- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46883013 13 + 50890351 GAGCGTGCCTGCC- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45466154 13 + 49145316 GGGAATGCCTACC- i calJac3.chr22 I 18 C 0 s canFam3.chr1 102995836 11 + 122678785 ---AGGACCCTCCC i canFam3.chr1 C 0 C 0 e mm10.chr7 3706913 5733 + 145441459 I a score=163226.000000 s hg38.chr19_GL949747v2_alt 182721 106 + 729520 AGCTAGTGGTCCCTGGCCT-------------CTCAGTACTA---TTCTACAGTAGTGAAC-ACACATCTTTACCAGAAACTTCTGTCATCAGGGGAGAGACGAGTGGTATTTTTGGAAAAAC s panTro4.chr19 59115256 106 + 63644993 AGCTAGTGGTCCCTGGCCT-------------CTCAGTACTA---TTCTACAGTAGTGAAC-ATACATCTTTACCAGAAACTTCTGTCATCAGGGGAGAGACGAATGGTATTTTTGGAAAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55993514 106 + 60714840 ACCTAGTGGTCCCTGGCCT-------------CTCCGTACTG---TTCTGCAGTAGTGAAC-ACACATCTTTACCAGAAACTTCTGTCATCACGGGAGAGACGAATGGTATTTTTGGAAAAAC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60049681 107 + 64156825 AGACAGTGGTCCCCGGCCT-------------CACAGTACTACTCTTCCACAGTGGTGAAC---ACATGTTTACCAGAAGCTTCTGTCATCAGGGGAGAGACCAATGGTCTTTTGGGAAAAAC i rheMac3.chr19 C 0 I 321 s macFas5.chr19 55075175 107 + 59248254 AGACAGTGGTCCCCGGCCT-------------CGCAGTACTACTCTTCCACAGTGGTGAAC---ACATGTTTACCAGAAGCTTCTGTCATCAGGGGAGAGACCAATGGTCTTTTGGGAAAAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47177666 107 + 51301725 AGACAGTGGTCCCCGGCCT-------------CTCAGTACTACTCTTCCACAGTACTGAAC---ACATGTTTACCAGAAGCTTCTGTCATCAGGGGAGAGACCAATGGTCTTTTGGGAAAAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46883026 107 + 50890351 AGACAGTGGTCCCCAGCCT-------------CTCAGTACTACTCTTCCACAGTCGTGAAC---ACATGTTTACCAGAAGCTTCTGTCATCAGGGGAGAGACCAATGGTCTTTTGGGAAAAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45466167 65 + 49145316 AGATGGTGGGCCCTGGCCT---------------CAGTAATG-----------------------------------------CTGTCATCAGCAGAGAGAC--ACGGTATCTTGGGAAAAAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 102995847 103 + 122678785 AGCAGGTGGTCCTTGTTCCTTGTTCCTTGGGGCATGGGTATAATCTGGTACACTCCTGAGCAACACAAACACACC---ACTTCCTTATTTCAGTGGGGATGCCAGC----------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3706913 5733 + 145441459 I e nomLeu3.chr10 102762063 276 - 106955855 M a score=849.000000 s hg38.chr19_GL949747v2_alt 182827 6 + 729520 TGTGTC s panTro4.chr19 59115362 6 + 63644993 TGTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55993620 6 + 60714840 TGAGTC i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55075282 4 + 59248254 --AGTC i macFas5.chr19 C 0 I 337 s papAnu2.chr19 47177773 4 + 51301725 --AGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46883133 4 + 50890351 --AGTC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102995950 4 + 122678785 TGTG-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3706913 5733 + 145441459 I e calJac3.chr22 45466232 0 + 49145316 C e nomLeu3.chr10 102762063 276 - 106955855 M e rheMac3.chr19 60049788 321 + 64156825 I a score=74474.000000 s hg38.chr19_GL949747v2_alt 182833 31 + 729520 AAAACCAGAAGGAAATTCCAAGTAAGCCGGT- s panTro4.chr19 59115368 31 + 63644993 AAAACCAGAAGGAAATTCCAAGTAAGCCGGC- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55993626 31 + 60714840 AAAACCAGAAGGAAATTCCAAGTAAGCCGGC- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60050109 31 + 64156825 aaaaCCAGATGGAAATTCCAAGTAAGCCGGC- i rheMac3.chr19 I 321 C 0 s macFas5.chr19 55075623 31 + 59248254 aaaaCCAGATGGAAATTCCAAGTAAGCCGGC- i macFas5.chr19 I 337 C 0 s papAnu2.chr19 47177777 31 + 51301725 AAAACCAGATGGAAATTCCAAGTAAGCCGGC- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46883137 31 + 50890351 AAAACCAGATGGAAATTCCAAGTAAGCCGGT- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45466232 29 + 49145316 --AGCCAGAAGGAAATTCCAAGTAAGCCAGC- i calJac3.chr22 C 0 C 0 s canFam3.chr1 102995954 25 + 122678785 ----CTAGGGGGAAGTTCT---CAAGCCACCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3706913 5733 + 145441459 I e nomLeu3.chr10 102762063 276 - 106955855 M a score=1673992.000000 s hg38.chr19_GL949747v2_alt 182864 680 + 729520 GTTTGCATATAGGGGTGGGAGGGAGCCGGTCATTGCTAGGCAGGGCAGGCGCCGAGTGGAGGTGGG--GGCCTTCCCTGCCTGCTGGCCCTGGGACCCTGACCCCGCCAGGCAAGAGACAGGT--GGGACGGGAGCTGAC--CAGAGGCTGA-CGGGTTGCTGGGGAAGG---TG-AACTGTTGGTGATTG----TTG---GGGAACACTTCACAGAATTTGCTTGCTAGTTTCAAAGC----TTGTGATGCGGTTGATGTTGGGCAAGTTCCCAGTTTTGTCTTCACATGTAGGGGAAGTGGGTTAGCGTAGGAGAAGGGGCGTTGAGGGAAGTCTGTTCCTCCTCTCCGCGTTCAGTGCTTCTGTGGACTCA--CGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCAGCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTTCTGAGGAAGTGAGAAACCTGAAATTGTGCAACCCCCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTATCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGGGCAGGGACAGTTCTGGAACACAGCTAAGTTACT--------GTAAACCACGTGGAGAAGT----CCATTGCGGCTTACTCAAGCTAGG---------------------------------------------------------------TGGTTGGCCCTT-CCTTCCCTCAGCGTTGCTACTTGGG--AAATGACGGTGGTCTTGT-----GTCCATGGGGCCAGCTGCTGCACCATCT s panTro4.chr19 59115399 680 + 63644993 GTTTGCATATAGGGGTGGGAGGGAGCCAGTCATTGCTAGGCAGGGCAGGTGCTGAGTGGAGGTGGG--GGCCTTCCCTGCCTGCTGGCCCTGGGACCCTGACCCCACCGGGCAAGAGACAGGT--GGGACGGGAGCTGAC--CAGAGGCTGA-CAGGTTGCTGGGGAAGG---TG-AACTGTTGGTGATTG----TTGTTGGGGAACACTTCACAGAATTTGCTTGCTAGTTTCAAAGC----TTGTGATGCGGTTGATGTTGGGCAAGTTCCCAGTTTTGTCTTCACATGTAGGGGAAGTGGGTTAGCGTAGGAGAAGGGGCGTTGAGGGAAGTCTGTTCCTC---TCCGTGTTTGGTGCTTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCGTTTTCTCAGCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTTCTGAGGAAGTGAGAAACCTGAAATTGTGCAACCCCCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTATCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGGGCAGGGACAGTTCTGGAACACAGCTAAGTTACT--------GTGAACCACGCGGAGAATC----CCATTGCGGCTTACTCGAGCTAGG---------------------------------------------------------------TGGTTGGCCCTT-CCTTCCCTCAGCGTTGCTACTTGGG--AAATGATGGTGGTCTTGT-----GTCCATGGGGCCAGCTGCTGCACCATCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55993657 681 + 60714840 GTTTGCATATAGGGGTGGGAGGGAGCCAGTCGTTGCTAGGCAGGGCAAGCGCCGAGTGGAGGTGGG--GGCCTGCCCTGCCTGCTGGCCCTGGGACCCTGACCCCGCCGGGCAAGAGACAGGT--GGGACGGGAGCTGAC--CTGAGGCTGA-CGGGTTGCTGGGGAAGG---TG-AACTGTTAGTGATTG----TTGTTGGGGAGCACTTCACAGAATTTGCTTGCTAGTTTTAAAGC----TTGTGATGCGGTTGATGTTGGGCAAGTTCCCAGTTTTGTCTTCACATGTAGGGGAAGTAGGTTAGCGTAGGGGAAGGGTCGTTAAGGGAACTCTGTTCCTCCTCTCCGCGTTTGGTGCTTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCGGTCTTGTTGATCATC--TGTT---------GGGGAGGGGTTTGGTTTCTGAGGAAGTGAGAAGCCTGAAATTGTGCAACCCTCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTATCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGTGCAGGGACAGTTCTGGAACACAGCTAAGTTACT--------GTAAACCACGTGGAGAAGT----CCATTGCGGCTTACTTGAGCTAGG---------------------------------------------------------------TGGTTGGCCCTT-CCTTCCCTCAGGGTTGCTACTTGGG--AAATGATGGTGGTCTTGT-----GTCCATGGGGCCAGCTGCTGCACCGTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102762339 677 - 106955855 GTTTGCATATAGGGGTGGGAGGGAGCCAGTGATTGCTAGGCAGGGCAGGTGCCACGTGGAGGTGGG--GGCCTGCCCTGCCTGCTGGCCCTGGGACCCTGACCCCACCCAGCAAGAGACAGGT--GGGACGGGAGCTGAC--CTGAGTCTGA-CGGGTTGTTGGGGAAGGTGATG-AACTATTAGTGATTG----TTG---GGGAGCACTTCACAGAATTTGCTTGTTAGTTTCAAAGC----TTGTGATGTGGTTGATGTTGGGCAAGTTCCCAGTTTTGTCTTCACATGTAGGGGAAGTGGGTTAGCGTAGGGGAAGGGGCGTTGAGGGAA--CTGTTCGTCCTATCCACGGTTGGTGCTTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCGGCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTTCTGAGGAAGTGAGAAACCTGAAATTGTGCAACTCCCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTATCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGTGCAGGGACAGTTCTGGAACACAGCTGAGTTACT--------GTAAACCACGTGGAGAAGT----CCATTGCGGCCGACTCGAGCTAGG---------------------------------------------------------------TGGTTGGC-----CCTTCCCTCAGGGTTGCTACTTGGA--AAATGATGGTGGTCTTGT-----GTCCATGGGGCCAGCTGCTGCACCGTCT i nomLeu3.chr10 M 276 C 0 s rheMac3.chr19 60050140 669 + 64156825 GTTTGCATGTAGGGGCGGGAGGGAGCCTGTTGATGCTGGGCAGGGGAGGCAGCAAGTGGAGGTGGG--GGCCCGTCCTGCCTG-TGGCCCTGGGACCCTGACCCCGCCCAGCAAGAGACAGGT--GGGGC-AGAGCTGGC--CTGAGACT-----GGTTGCTGGGGACGG---TG-AACTGTTAGTGACTG-TTTTTGTTGGGGAGCACTTCACCGAATTTGC----CGGTTTCAAAGCTTGTTTGTGTTGTGGTTGATGTTGGGCAAGTTCCCAGTTTTGTCTTCACACGTAGGGGAAGTGGGTTTGTGTAGGGGAAGGGGCATTGAGGGAA--CTCTTCCTCCTATCCGCATTTGGTGCCTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCGGCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTGCTGAGGAAGTGAGAACCTTGAACTTGGGCAAC-CCCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTGTCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGTGCGGGGATGGCTCTGGAACACAGCTGAGTTGCT--------GTAAACCACGT---GAAGT----CCACTGCCGCTTACTCGAGCTAGG---------------------------------------------------------------TGG-TGGC-----CCTTCCCTC--GGTTGCTACTTGGG--AAGTGA---TGGTCTTGTTGGATGTCCATGGGGCCAGCTGCTGCAGCGTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55075654 672 + 59248254 GTTTGCATGTAGGGGCGGGAGGGAGCCTGTCGATGCTGGGCAGGGGAGGCAGCAAGTGGAGGTGGG--GGCCCGTCCTGCCTG-TGGCCCTGGGACCCTGACCCCGCCCAGCAAGAGACAGGT--GGGGC-AGAGCTGGC--CTGAGACT-----GGTTGCTGGGGACGG---TG-AACTGTTAGTGACTG-TTTTTGTTGGGGAGCACTTCACCGAATTTGC----CGGTTTCAAAGCTTGTTTGTGTTGTGGTTGATGTTGGGCAAGTTCCCAGTTTTGTCTTCACACGTAGGGGAAGTGGGTTTGTGTAGGGGAAGGGGCATTGAGGGAA--CTCTTCCTCCTATCTGCATTTGGTGCTTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCGGCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTGCTGAGGAAGTGAGAAACTTGAACTTGTGCAAC-CCCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTGTCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGTGCAGGGATGGCTCTGGAACACAGCTGAGTTGCT--------GTAAACCACGT---GAAGT----CCACTGCCGCTTACTCGAGCTAGG---------------------------------------------------------------TGG-TGGC-----CCTTCCCTC--GGTTGCTACTTGGG--AAGTGATGGTGGTCTTGTTGGACGTCCATGGGGCCAGCTGCTGCAGCGTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47177808 675 + 51301725 GTTTGCATGTAGGGGCGGGAGGGAGCCTGTCGATGCCAGGCAGGGGAGGCAGCAAGTGGAGGTGGG--GGCCCGTCCTGCCTg-tggccctgggaccctgacCCTGCCCAGCAAGAGACAGGT--GGGGC-AGAGCTGGC--CTGAGACT-----GGTTGCTGGGGATGG---TG-AACTGTTAGTGACTG-TTTTTGTTGGGGAGCACTTCACTGAATTTGC----CAGTTTCAAAGCTTGTTTGTGTTGTGGTTGATGTTGGGCAAGTTTCCGGTTTTGTCTTCACATGTAGGGGAAGTGGGTTCATGTAGGGGAAGGGGCATTGAGGGAA--CTCTTCCTCCTATCCGCATTTGGTGCTTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCGGCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTGCTGAGGAAGTGAGAAACTTGAACTTGTGCAAC-CCCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTGTCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGTGCAGGGATGGCTCTGGAACACAGCTGAGTTGCT--------GTAAACCACGTGGAGAAGT----CCACTGCCGCTTACTCGAGCTAGG---------------------------------------------------------------TGG-TGGC-----CCTTCCCTC--GGTTGCTACTTGGG--AAGTGATGGTGGTCTTGTTCGACGTCCATGGGGCCAGCTGCTGCAGCGTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46883168 643 + 50890351 GTTTGCTTATAGGGGTGGGAGGGAGCCTGTCGATGCTGGGCAGGGGAGGCAGCAAGTGGAGGTGGG--GGCCTGTCCTGCCTG-TGGCCCTGGGACCCTGACCCCGCCCAGCAGGAGACAGGT--GGGGC-AGAGCTGGC--CTGAGACT-----GGTTGCTGGGGAAGG---TG-AACTGTTAGTGACTC-TTTTTGTTGGGGAGCACTTCACCGAATTTGC----CAGTTTCAAAGCTTGTTTGTGATGTGGTTGATGTTGGGCAAGTTCCCGGTTTTGTCTTCACATGTAGGGGAAGTGGGTTCGTGTAGGGGAAGGGGCGTTGAGGGAA--CTCTTCCTCCTATCCGCATTTGGTGCTTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCGCCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTGCTGAGGAAGTGAGAAACTTGAACTTGTGCAAC-CCCTCAGG--------------------CTGCAGGCTGTAGCTGATTGGGTCCTTGTCTG--------GAGGCCTTCAGGG------------TTGGAGGTCAGTGCAGGGATGGCTCTGGAACACAGCTGAGTTGCT--------GTAGACCACGCGGAGAAAT----CCACTGCCGCTTACTCGAGCTAGG---------------------------------------------------------------TGG-TGGC-----CCTTCCCTC--GGTTGCTA----------------------------------CATGGGGCCAGCTGCTGCACCGTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45466261 645 + 49145316 GTTTGCATATA-GGGTAGAAGGGAGTTGTTCATTTCCAGGCAGGGGATGCAGC--GTGCAGGT-GG--GGCCTGCCCTGGCTGTTGGCCCTTTGACCCTGACCCGG-------GGAGAGAAGT--GGGCTGGGAGCTGACCTCTGAGGCTGGCCTGGTTTTTGGGGAAGG---TG-GACTGTTGGTGGTGA--TTTCGCTGGGCAGCACTTCATAGAA-CTGCGGGCTCGTGTCGGAGC----TCGTGATGTGGGTGATGCTGGGCAAGTTCCCAGCTTTGTCTTCACTCCGAGGGGAAGTCGGTTGGTGT-GGGGGAGGGGTGTTGAGGGAA--CTCTTCCTCCTACCCACGCTTGGT--TTCTGTGGACTCA--TGGTCAGGAGGTT---AGGCTTCCGTTTTCTCTGCCTTGTTGATAAGCTGTGTC---------GGGATGGGG-TTGGTCTCTGAGGAAGTGAGAAACTTGAAACTGTGCAACCTTCT---------------------------CAGGCCCTAGTCGCTGGGGTTCTTGTCTA--------GAGGCCTTCAGTC------------TTTGAGGG---------------TCAGGGGCGCAGCTGAGTT-CT--------GTAAACCCTGCAGAGCAGTCAGCCCACTGCAGCTT----GAGCTAGG---------------------------------------------------------------TGGGCAGC-----CCTTCTCTCCGGGTTGCCACTTGGG--AAATGATGGTGGTCTTGTTGGACGTTCACGGGGCCAGCTGCTGCACCTTCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102995979 713 + 122678785 ATTTGCATGGTGGTGAGCGAGGGA---------------GCAGGGAAAGTG-TGGGTGGAGGTTGGTTGGCATGGTCAACC---CAGCCCT-----TCTAGCCTTGGCAAAAAGAAGTCGGGTTCAGGTTGGCAACTGAGCGCTGAACCT---TGGGTTACAAGTGAGAA---TGAAACAGTT--TAATTGGGTTTTGCTGGGGAGCATTGGACAGGAAGGACAGGCCAGTTTCAAAGC----TTATTTCG--------------------------------------------------------GTGTGGGGAAAATGGC--TGAGGCACCCTGCTCCATCCCCCCTGCATCTGGAG--TTTGTGAACCCAGTGAGTCAGGAAGAAGACTGGCTTCCATTTTCTCTGTCTTGCTGAGAAGTTGGATCAGGCAGAGGAGGAAGGGGCTTGGTCTCAGGAAACACAAAGCCCTTGGCATTGAGCAAC-CCCTCATGGGCTGTGGCACTGCTGAGCTCTGAGGTCAGTGATGGCCTGGGACGCTGCCAGGCTGCCATGGAGCCTGCAGGAGGTCCCCAGTCCTTCCAGCTTAGTGCTGG----GTTCCCCCACGCCACAAGGTTACCATGTGGTAATAAATGATGTTAGCATTT----CCTTGGCATCTTACAGAAACTAAGATGAGCTGTGTACTGATGGGAATTCTGGAAGCAATCGACTCTCGTAAGACCCCAGGAAGTTCCTGG-TGGTCCTTGTCCTGCCTCCAGGCTG--GCTGGGGTCAAGTGGTA-----CCTGC----------TGTGAGCAGCTCCTGTGCCTTCC i canFam3.chr1 C 0 C 0 e mm10.chr7 3706913 5733 + 145441459 I a score=631131.000000 s hg38.chr19_GL949747v2_alt 183544 225 + 729520 GGGCTCACTGT----GGTCTCCTT---CCTTGGAGCGTGGGGTCTGGG------------CTAGTGGATGGCCGGGGCAGCGTACTCACTGGGCTC--CTGGGAGCTCC----CC----TGGGAGGAAGAGACTGCAGTTGTCTCTGGTCTGAGAG---GT---GGTGGCTCACCTGGGTGTAGCTCACAA-TTGC-GGAGCTCCA----CGGCAGCCTGGAGGGAGGGGAGAGTGGGAGTTGAGGTATGCGGTT---CTGGGGAGAAG s panTro4.chr19 59116079 236 + 63644993 GGGCTCACTGT----GGTCTCCTT---CCTTGGAGCGTGGGGTCTGGGTCTTGT-CTGGGCTAGTGGATGGCCAGGGCAGCGTACTCACTGGGCTC--CTGGGAGCTCC----CC----TGGGAGGAAGAGACTGCAGTTGTCTCTGGTCTGAGAG---GT---GGTGGCTCACCTGGGTGTAGCTCACAA-TTGC-GGAGCTCCA----CGGCAGCCTGGAGGGAGGGGAGAGTGGGAGTTGAGGTATGCGGTT---CTGGGGAGAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994338 221 + 60714840 GGGCTCACTGT----GGT---CTT---CCTTGGAGTGTGGGGTCTGGGTCTTGT-CTGGACTAGTGGATGGCCAGGGCAGCCTACTCACTGGGCT------------------CC----TGGGAGGAAGAGACTGCAGTTGTCTCTGGTCTGAGAG---GT---GGCAGCTCACCTGGGTGTAGCTCGCAA-TTGT-GGAGCTCCA----CGGCAGCCTGGAGGGAGGGGAGAGTGGGAGTTGAGGTATGCGGTT---CTCGGGAGAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763016 235 - 106955855 GGGCTCACTGT----GGTCTCCTT---CCTTGGAGCATGGCGTCTGGGTCTTGT-CTGGGCTAGTGGATGGCCAGGGCAGCGTATTCACTGGGCTC--CTGGGGGCTCC----CC----TGGGAGGAAGAGA---CAGTTG--TCTGGTCT-AGAG---GT---GGTGGCTCACCTGGGTGTAGCTCACAATTTGT-GGAGTTCCAGATGCAGCAGCCTGGAGGGAGGGGAGAGTGGGAGTTGAGGTATGTGGTT---CTGGGGAGAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60050809 234 + 64156825 GGGCTCACTGT----GGT---CTT---CCTTGGAGCGTGGGGTCTGGGTCTTGT-GTGGGCTCGTGGATGGCCAGGGCAGCGTAGTCACTGGGCTCCTCTGGGAGCTCC----CC----TGGGAGGAAGAGGGTGCAGTTG--TCTGGTCT--GAG---GT---GGTGGCCCACCTGGGGGTAGCTCCCCC------AGAGCTCCAGATGCAGCCGCCTGGAGGGAGAGAGGAGTGGGAGGTGAGGCGTGCGGTTCTGCTGGGGAGAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076326 232 + 59248254 GGGCTCACTGT----GGT---CTT---GCTTGGACCGTGGGGTCTGGGTCTTGT-GTGGGCTCGTGGATGGCCAGGGCAGCGTAGTCACTGGGCTCCTCTGGGAGCTCC----CC----TGGGAGGAAGA--GTGCAGTTG--TCTGGTGT--GAG---GT---GGTGGCCCACCTGGGTGTAGCTCCCCC------AGAGCTCCAGATGCAGCCGCCTGGAGGGGGAGAGGAGTGGGAGGTGAGGCGTGCGGTTCTGCTGGGGAGAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178483 234 + 51301725 GGGCTCACTGT----GGT---CTT---GCTTGGAGCGTGGGGTCTGGGTCTTGT-GTGGGCTAGTGGATGGCCAGGGCAGCGTAGTCACTGGGCTCCTCTGGGAGCTCC----CC----TGGGAGGAAGAGAGTGCAGGTG--TCTGGTCT--GAG---GT---GGTGGCCCACCTGGGTGTAGCTCACCC------AGAGCTCCAGATGCAGCCgcctggagggagagaggagtaGGAGGTGAGGTATGCGGTTCTGCTGGGGAGAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46883811 234 + 50890351 GGGCTCACTGT----GGT---CTT---CCTTGGAGCGTGGGGTCTGGGTCTTGT-GTGGGCTAGTGGATGGCCAGGGCAGCGTAGTCATTGGGCTCCTCTGGGAGCTCC----CC----TGGGAGGAAGAGAGTGCAGTTG--TCTGGTCT--GAG---GT---GGTGGCTCACCTGGGCGTAGCTCACCC------AGAGCTCCAGATGCAGCAGCCTGGAGGGAGAGAGGAGTGGGAGGTGAGGTATGCGGTTCTGCTGGGGAGAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45466906 214 + 49145316 GGGGTCACCGT----GGT---CT------TTGGAGCGTGGGGTCTGGGTCTTGTCCTGGCCTAGTGGATGGCCAGAGCAGCGGATTCACTGGGCTC------------C----CT----TGGGAGGAAGAAAGTGCAGTTGCCTCTAGTCTGAGAT---CT---GGTGGCTCATCTGGGTGCAGCTCACATCTTATGGGAGTTCCAGATGCAGCAGCCTGGAGGGAGGG-------------GAGGGATGTGGTT---CTGTGGAGAAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3712646 232 + 145441459 GGGGTCATTGC----TCC---ATG---TCCTTGGGAACAGCCTCTGG--------ACGAGC-----AGCCGCCAGAGTAGCATATACACTGGGCTCCTCTGGGGCTTCCCCTGCC----TGGGAGAGAGGAGATGCAGCTGCCCCCTGTCT--GAGTGTCC---TGCTGCACAGCTGGGCATAGGTCACATCCTGG-GACTCCCCAGATTCGGCAGCCTGGAGTGGGAGAGG-GTGAGAGA-AAGGTATGTGATT-TGCTTGGG-GAAA i mm10.chr7 I 5733 C 0 s canFam3.chr1 102996692 243 + 122678785 GGGGTCCCTGTAGGGAGT---CTTAAGACCTCGAGTGTGGGGTCTGGGTCCT-T-CTGGGCTAGTAGAAGGCCAGAGCAGCATACACACTGGGCTCCTCTGGGGGCTCC----TCTGATTGGGAGGGAGAGGATGCACTTGTTTCCTGTCG--GAG---GGTCAGATGGTTCAGTTGGATATAGATCACATCTTGC-TGGTCCTCAGATATAGCCACCTGGAGCAGGGGGAGAGGA------AAGGCACGTGG-----CTGAGAAGAGG i canFam3.chr1 C 0 I 3199 a score=37203.000000 s hg38.chr19_GL949747v2_alt 183769 15 + 729520 CCTACGGGCTTGGAA s panTro4.chr19 59116315 15 + 63644993 CCTACGGGCTTGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994559 15 + 60714840 CCTACGGGCTTGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763251 15 - 106955855 CCTATGGGCCTGGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051043 14 + 64156825 CCTGCAGGCTTGGG- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076558 14 + 59248254 CCCACAGGCTGGGG- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178717 15 + 51301725 CCTACAGGCTTGGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884045 15 + 50890351 CCTACAGGCTTGGGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467120 15 + 49145316 CCTACCGGCTTGGGA i calJac3.chr22 C 0 I 203 s mm10.chr7 3712878 15 + 145441459 CCTGCAGGTCTGTGG i mm10.chr7 C 0 C 0 e canFam3.chr1 102996935 3199 + 122678785 I a score=20962.000000 s hg38.chr19_GL949747v2_alt 183784 8 + 729520 AGGAAAAG s panTro4.chr19 59116330 8 + 63644993 AGGAAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994574 8 + 60714840 AGGAAAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763266 8 - 106955855 AGGAAAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051057 8 + 64156825 AGGAAACG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076572 8 + 59248254 AGGAAACG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178732 8 + 51301725 AGGAAACG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884060 8 + 50890351 AGGAAACG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3712893 8 + 145441459 AGGACAGG i mm10.chr7 C 0 I 3546 e canFam3.chr1 102996935 3199 + 122678785 I e calJac3.chr22 45467135 203 + 49145316 I a score=120798.000000 s hg38.chr19_GL949747v2_alt 183792 65 + 729520 GG------TCTTCAGGGCTCTGTCTACAGAGGCAGCGAGCGGGGCAACAGAG---GGAGACTCCATCTCAAG--------------------------------------------------AA s panTro4.chr19 59116338 63 + 63644993 GG------TCTTCAGGGCTCTGT--ACAGAGGCAGCGAGCGGGGCAACAGAG---GGAGACTCCATCTCAAG--------------------------------------------------AA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994582 71 + 60714840 GGTCTTCATCTTCAGGGCTCTGTCTACAGAGGCAGCGAGCGGGGCAACGGAG---GGAGACTCCATCTCAAA--------------------------------------------------AA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763274 120 - 106955855 GGTCTTCATC-TCAGGGCTCTGTCTACAGAGGCAGCGAACGGGGCAACAGAG---GGAGACTCCAGCTCAGGGCTCTGTCTACAGAGGTGGCGAGCGGGGCAACAGAGAGAGACTCCAGCTCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051065 73 + 64156825 GGTCTTCATCTTCAGGGCTCTGTGAACAGAGGCAGCGAGT-GGGCAACAGAGGGAGGAGACTCCGTCTCGAA--------------------------------------------------AA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076580 73 + 59248254 GGTCTTCATCTGCAGGGCTCTGTGAACAGAGGCAGCGAGT-GGGCAACAGAGGGAGGAGACTCCGTCTCGAA--------------------------------------------------AA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178740 74 + 51301725 GGTCTTCATCTTCAGGGCTCTGCGTACAGAGGCAGCGAGTGGGGCAACAGAGggaggagactccatctcgaa--------------------------------------------------aa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884068 74 + 50890351 CGTCTTCATCTTCAGGGCTTTGCCTACAGAGGCAGCGAGTGGGGCAACAGAGGGAGGAGACTCCATCTCGAA--------------------------------------------------AA i chlSab2.chr6 C 0 C 0 e mm10.chr7 3712901 3546 + 145441459 I e canFam3.chr1 102996935 3199 + 122678785 I e calJac3.chr22 45467135 203 + 49145316 I a score=304076.000000 s hg38.chr19_GL949747v2_alt 183857 115 + 729520 tttgtagagatggagtctcaatgtgttgccccggctgatctaaaaccct----tggcctcaagcaatccactc------gcctcccaaagcgctaggatgacaggtgtgagccacagtgcctggc s panTro4.chr19 59116401 115 + 63644993 tttgtagagatggagtctcaatgtgttgccccggctgatctaaaaccct----tggcctcacgcaatccaccc------gcctcccaaagcactaggatgacaggtgtgggccacagtgcctggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994653 115 + 60714840 tttgtagagatggggtctcaatgtgttgccccggctgatctaaaactct----tggcctcaagcaatccactc------gcctcccaaagcgctaggatgacaggtgcgagccacagtgcctggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763394 115 - 106955855 tttgtagagatggggtctcactgtgttgccccggctgatctaaaactct----tggcctcaagcaatccaccc------gcctcccaaagcgctaggatgacaggtgtgagccacagtgcctggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051138 114 + 64156825 tttgtagagacga-gtctcactgtgttgccctggctgatctcaaactct----tggcctcaagcaatccaccc------acctcccaaagtgctaggatgacaggtgtgagccacagtgcccggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076653 114 + 59248254 tttgtagagacga-gtctcactgtgttgccctggctgatctcaaactct----tggcctcaagcaatccaccc------acctcccaaagtgctaggatgacaggtgtgagccacagtgcccggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178814 114 + 51301725 tttgtagagacgg-gtctcactatgttgccctggctgatctcaaactct----tggcctcaagcaatccaccc------acctcccaaagtgctaggatgacaggtgtgagccacaatgcccggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884142 118 + 50890351 tttgtagagacgg-gtctcaccatgttgccctggctgatctcaagcaatccacccacctcaagcaatccaccc------acctcccaaagtgctaggatgacaggtgtgagccgcagtgcccggt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467338 119 + 49145316 ttagtagagacggggtttcaccatgttgaccaggatggtctcgatctct----tgacctc--gtgatccacctgcctcggcctcccaaagtgctgggattataggcatgagccaccgtgcccggc i calJac3.chr22 I 203 C 0 e mm10.chr7 3712901 3546 + 145441459 I e canFam3.chr1 102996935 3199 + 122678785 I a score=4500.000000 s hg38.chr19_GL949747v2_alt 183972 1 + 729520 c s panTro4.chr19 59116516 1 + 63644993 c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994768 1 + 60714840 c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763509 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051252 1 + 64156825 c i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076767 1 + 59248254 c i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178928 1 + 51301725 c i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884260 1 + 50890351 c i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467457 1 + 49145316 c i calJac3.chr22 C 0 I 54 s canFam3.chr1 103000134 1 + 122678785 C i canFam3.chr1 I 3199 C 0 e mm10.chr7 3712901 3546 + 145441459 I a score=46133.000000 s hg38.chr19_GL949747v2_alt 183973 20 + 729520 TGCGTGGGTCTGTTTAATCT s panTro4.chr19 59116517 20 + 63644993 TGCGTGGGTCTGTTTAATCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994769 12 + 60714840 TGCGTGGGTCTG-------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763510 20 - 106955855 TGCATGGGTCTGTTTAATCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051253 20 + 64156825 TGCGTGGGTCTGTTTAATCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076768 20 + 59248254 TGCGTGGGTCTGTTTAATCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178929 20 + 51301725 tGCGTGGGTCTGTTTAATCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884261 20 + 50890351 TGCTTGGGTCTGTTTAATCT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103000135 20 + 122678785 TGAGTGGATGTCCTTCATCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3712901 3546 + 145441459 I e calJac3.chr22 45467458 54 + 49145316 I a score=11340.000000 s hg38.chr19_GL949747v2_alt 183993 6 + 729520 CCGGGC s panTro4.chr19 59116537 6 + 63644993 CCGGGC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102763530 6 - 106955855 CCGGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051273 6 + 64156825 GCGGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076788 6 + 59248254 GCGGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178949 6 + 51301725 CCGGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884281 6 + 50890351 CTGGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467512 6 + 49145316 CCTGGC i calJac3.chr22 I 54 C 0 s canFam3.chr1 103000155 6 + 122678785 CCATGA i canFam3.chr1 C 0 C 0 e mm10.chr7 3712901 3546 + 145441459 I e ponAbe2.chr19 55994781 0 + 60714840 C a score=108917.000000 s hg38.chr19_GL949747v2_alt 183999 38 + 729520 CT-CTTGCTCTCCCTTTCTTGG-TGAT-----CTCCTTGGACCAC s panTro4.chr19 59116543 38 + 63644993 CT-CTTGCTCTCCCTTTCTTGG-TGAT-----CTCCTTGGACCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994781 35 + 60714840 ----TTGCTCTCCCTTTCTTGG-TGAT-----CTCCTTGGATCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763536 38 - 106955855 CT-CTTGCTCTCCCTTTCTTGG-TGAT-----TTCCTTGGACCAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051279 38 + 64156825 CT-CTTGCTCCCCCTTTCTTGG-TGAT-----CTCCTTGGACCAC i rheMac3.chr19 C 0 I 43 s macFas5.chr19 55076794 38 + 59248254 CT-CTTGCTCCCCCTTTCTTGG-TGAT-----CTCCTTGGACCAC i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47178955 38 + 51301725 CT-CTTGCTCCCCCTTTCTTGG-TGAT-----CTCCTTGGACCAC i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46884287 38 + 50890351 CT-CTTGCTCCCCCTTCCTTGG-TGAT-----CTCCTTGGACCAC i chlSab2.chr6 C 0 I 46 s calJac3.chr22 45467518 39 + 49145316 CTGCTGGGTCTCCCTTTCCTGG-TGAG-----CTCCTTCGACCAC i calJac3.chr22 C 0 C 0 s mm10.chr7 3716447 38 + 145441459 CT-CCTGTTCTCATCTTCTT-G-TGATCAATCCTGCTTAGG---- i mm10.chr7 I 3546 C 0 s canFam3.chr1 103000161 39 + 122678785 CC-CTCACCGGCCATTTTTCAGCCCCT-----GTCCCTAGAACAT i canFam3.chr1 C 0 C 0 a score=24858.000000 s hg38.chr19_GL949747v2_alt 184037 23 + 729520 ATCCCTGTAT-CATTCT-----------------CTCTCTC- s panTro4.chr19 59116581 23 + 63644993 TTCCCCGTAT-CATTCT-----------------CTCCCTC- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994816 23 + 60714840 TGCCCCGTAT-CATTCT-----------------CTCTCTC- i ponAbe2.chr19 C 0 I 19 s nomLeu3.chr10 102763574 23 - 106955855 TTCCCTGTAT-CATTCA-----------------CTCCCTC- i nomLeu3.chr10 C 0 I 19 s macFas5.chr19 55076833 23 + 59248254 GCCCCCATCT-CATTTT-----------------CTCCCTC- i macFas5.chr19 I 1 I 19 s papAnu2.chr19 47178994 22 + 51301725 GCCCCCATC--CATTTT-----------------CTCCCTC- i papAnu2.chr19 I 1 I 19 s calJac3.chr22 45467557 23 + 49145316 TGCCCCATCT-CATTCC-----------------CTCCCTC- i calJac3.chr22 C 0 I 19 s mm10.chr7 3716485 41 + 145441459 ATTCCTGTATCCATCCTAGCCATAAGCTCCCCAGCCCTCTC- i mm10.chr7 C 0 C 0 s canFam3.chr1 103000200 24 + 122678785 GGCCCCATCT-CAGCCT-----------------GTGCTCCT i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46884325 46 + 50890351 I e rheMac3.chr19 60051317 43 + 64156825 I a score=267977.000000 s hg38.chr19_GL949747v2_alt 184060 95 + 729520 GACCCT-------GAGCCC-----A--------GGGT----------CCAGAG----CAGAGAACGGGATGGGGTCTGGGTA---GGGGCCCCTCACTTGCAACCAGGATGTTGGGTGGGGGCGACGGGGGA s panTro4.chr19 59116604 95 + 63644993 GACCCT-------GAGCCC-----G--------GGGT----------CCTGAG----CAGAGAACGGGATGGGGGCTGGGTA---GGGGCCCCTCACTTGCAACCAGGATGTTGGGTGGGGGCGACAGGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994858 95 + 60714840 GACCCT-------GAGCTC-----A--------GGGT----------CCTGAG----CAAAGAACGGGACGGGGGCTGGGTA---GGGGCCCCTCACTTGGAACCAGGATGTTGGGTGGGGGCGACAGGGGG i ponAbe2.chr19 I 19 C 0 s nomLeu3.chr10 102763616 95 - 106955855 GGCCCT-------GAGCCC-----A--------GGGT----------CCTGAG----CAGAGAACGGGATGAGGGCTGGGTA---GGGGCCCCTCACTTGCAACCAGGATGTTGGATGGGGGCGACGGGGGG i nomLeu3.chr10 I 19 I 112 s rheMac3.chr19 60051360 92 + 64156825 GACCCT-------GAGCCC-----A--------GGGT-----------CTGAG----CAGAGAGCGGGACGGGGGCTAGGCA---GGGGCCCCTCACCTGCAACCAGCATATTGGGTGGGGGTGACGGGG-- i rheMac3.chr19 I 43 C 0 s macFas5.chr19 55076875 92 + 59248254 GACCCT-------GAGCCC-----A--------GGGT-----------CTGAG----CAGAGAGCGGGACGGGGGCTAGGCA---GGGGCCCCTCACCTGCAACCAGCATATTGGGTGGGGGTGACGGGG-- i macFas5.chr19 I 19 C 0 s papAnu2.chr19 47179035 92 + 51301725 GACCCT-------GAGCCC-----A--------GGGT-----------CTGAG----CAGAGAGTGGGACGGGGGCTAGGCA---GGGGCCCCTCACCTGCAACCAGCATATTGGGTGGGGATGATGGGG-- i papAnu2.chr19 I 19 C 0 s chlSab2.chr6 46884371 92 + 50890351 GACCCT-------GAGCCC-----A--------GGGT-----------CTGAG----CAGAGAGCGGGACGGGGGCTGGGCA---GGGGCCCCTCACCTGCAACCAGCATATTGGGTGGGGGTGTTGGGG-- i chlSab2.chr6 I 46 C 0 s calJac3.chr22 45467599 94 + 49145316 GACCCT-------GAACCC-----A--------GGGT----------CCTGAG----CAGATAACAAGATGGGGGCTAGGCA---GGGGCTTCTCATCTGCAACCAGGATGTTGGGTGGGGGCCGCAGGGG- i calJac3.chr22 I 19 C 0 s mm10.chr7 3716526 100 + 145441459 CCCCCT-------TATCCCCCATGA--------GAGC-----------CTGAG----CAGAGGCTAGGTCCCTGACTGAGTCTGTTGAGTTCCTCACCTGTGATCAGGATGTCCA--GGGGCTCACTGGAGG i mm10.chr7 C 0 C 0 s canFam3.chr1 103000224 119 + 122678785 GACCCTCTCCCCGGACCCC-----ATCACCCAGGGGTGACAGTGGCCCCTGAGCCTTCAGCAGACAGGACATGGGGCAG------GGGGCTCCTCACCTGTGATCAGGATGTCCAGAGGGGCACTGGGTG-- i canFam3.chr1 C 0 C 0 a score=224229.000000 s hg38.chr19_GL949747v2_alt 184155 64 + 729520 CCGACCTTGGGCAGGAGGCATTGTGTCCACCGCAGCATCTGTGCTGGCCCCCAGGGGGGTGGCT s panTro4.chr19 59116699 64 + 63644993 CCGACCTTGGGCAGGAGGCATTGTGTCCACCGCAGCATCTGTGCTGGCCCCCAGGGGGGTGGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994953 64 + 60714840 CCAACCTTGGGCAGGAGGCATTGTGTCCACCGCAGCATCTGTGCTGTCCCCCATGGGGGTGGCT i ponAbe2.chr19 C 0 I 114 s nomLeu3.chr10 102763823 64 - 106955855 CCAACCTTGGGCAGGAGGCACTGTGTCCACCGCAGCATCTGTGCTGGCCCCCATGGGGGTGGCT i nomLeu3.chr10 I 112 C 0 s rheMac3.chr19 60051452 64 + 64156825 TCAGCCTCCGGCAGGAGGCATCGTGTCCTCCGCAGCATCCGTGCTGGCCCCCATGTGGGTGGCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076967 64 + 59248254 TCAGCCTCCGGCAGGAGGCATCGTGTCCTCCGCAGCATCCGTGCTGGCCCCCATGTGGGTGGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47179127 64 + 51301725 CCAACCTCGGGCAGGAGGCATCGTGTCCTCCGCAGCATCCGTGCTGGCCCCCATGGGGGTGGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884463 64 + 50890351 CCAACCTCTGGCAGGAGGCATCGTGTCCACCGCAGCATCCCTGCTGGTCCCCATGGGGGTGGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467693 59 + 49145316 CCTACCTTGGGCAGGA---AATGTGTCCGCCTCAGCATCTGTGCTGGCCCCC--GGGTGTGGCT i calJac3.chr22 C 0 C 0 s mm10.chr7 3716626 64 + 145441459 CTGACCACTCAGAGGAGAGGTTGTGTGCACCATAGCATCTGTATTGGCCTCCAGTGGAGCTACT i mm10.chr7 C 0 C 0 s canFam3.chr1 103000343 64 + 122678785 CTGACCACGTGGAGGAGAGATTGTGTCCACTGTAGCACCTGTACCGGCCCCCGTGGGTGCGGCT i canFam3.chr1 C 0 C 0 a score=571175.000000 s hg38.chr19_GL949747v2_alt 184219 211 + 729520 CGCATGGC-CCAGGGGGACGT------CCAGGAGGTGCTGCCCA-TCTAGGCGCTGGCGGGCTG---------GGAGCCCCTTGTCC-TGGTCAATGCAGAGCTGTCAAAACCGGCCTCTGAGTGATGCT-GAGGGGTCAGGCTGTCTCCAGAGAGCACCGGCGATCCCGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAC-GCCCCTGAGATGAGGCGACTGGTA--- s panTro4.chr19 59116763 211 + 63644993 CACATGGC-CCAGGGGGACGT------CCAGGAGGTGCTGCCCA-TCTAGGCGCTGGCGGGCTG---------GGAGCCCCTTGTCC-TGGTCAATGCAGAGCTGTCAAAACCGGCCTCTGAGTGATGCT-GAGGGGTCAGGCTGTCTGCAGAGAGCACCGGCGATCCCGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAC-GCCCCTGAGACGAGGCGACTGGTA--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55995131 211 + 60714840 CACAGGGC-CCAGGGGGACGT------CCGAGAGGTGCTGCCCA-TCTAGGCGCTGGGGGGTTG---------GGAGCCCCTCGTCC-TGGTCAATGCAGAGCTGTCAAAACTGGCCTCTGAGTGACGCT-GAGGGCCCAGGCCGTCTCCGGAAAGCACCAGTGATCCCGGCTGTGCTGAGAGGGGGGACTGAGGGCTGTCTGGAC-GCCCCTGAGATGAGGCAACTGGTA--- i ponAbe2.chr19 I 114 C 0 s nomLeu3.chr10 102763887 212 - 106955855 CACAGGGC-CCAGGGGGACTT------CCGGGAGGTGCCGCCCATTCTAGGTGCTGGGAGATTG---------GGAGCCCCTTGTCC-TGGTCAATGCAGAGCTGTCAAAACCAGCCTCTGAGTTACGCT-GAGGGCTTAGGCCGTCTCCAGAGAGCACCAGCGATCCTGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAT-GCCCCTGCGATGGGGCGGCTGGTA--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051516 187 + 64156825 CACAGGGC-CCAGGAGGAAGT------CAGGGAGG-----------------------GGGTTG---------GGAACCCCTTGTCC-TGGTCAATGCAGAGCTGTCAAAACTGGC--CTGAGTGACACT-GGGCGGTCAGGCCATCTCCAGAGAGCACCAGCGATCCCGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAC-GCCCCTGAGATAAGGCGACTGGTA--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55077031 187 + 59248254 CACAGGGC-CCAGGAGGAAGT------CAGGGAGG-----------------------GGGTTG---------GGAACCCCTTGTCC-TGGTCAATGCAGAGCTGTCAAAACTGGC--CTGAGTGACACT-GGGCGGTCAGGCCATCTCCAGAGAGCACCAGCGATCCCGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAC-GCCCCTGAGATAAGGCGACTGGTA--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47179191 184 + 51301725 CACAGGGC-CCAGGAGGAAGT------CCG---GG-----------------------GGGTTG---------GGAGCCCCTTGTCC-TGGTCAATGCAGAGCTGTCAAAACTGGC--CTGAGTGACACT-GGGCGGTCAGGCCATCTCCAGAGAGCACCAGCGATCCCGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAC-GCCCCGGAGATAAGGCGACTGGTA--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884527 188 + 50890351 CACAGGGCACCAGGAGGAAGT------CAGGGAGG-----------------------GGGTTG---------GGAGCCCCTTGTCC-CGGTCAATGCAGAGCTGTCAAAACCGGC--CTGAGTGACACT-GGGTGGTCAGGCCATCTCCAGAGAGCACCAGCGATCCCGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAC-GCCCCTGAGATAAGGCGACTGGTA--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467752 208 + 49145316 CACAGGGC-CCAGGAAGAAGT------CGGGTATGTGCTGCCCA-CATAGGCACTGGGGGGTTG---------GGAGCTCCTTGTCC-TGATCAATGCAGAGCTGTCAGATCTGGC--CTCAATGATGCTGGGGGGGTCAGGCTGTCTCCAGTGAGCTCCAGCGAGCCCAGCTGTGCT--GAGGGAGGGCTGTGGGCTGCCTGTGC-GCCCCTGAGAGGAGAGGATTGGTA--- i calJac3.chr22 C 0 C 0 s mm10.chr7 3716690 221 + 145441459 CACATAGC-CCAGTGTGAAGTTGGCCACAGAGAAGCCAGTGTCAGTCTGCTGGCTAGAGTGCTGCATGATGTCAGCTCCCCCCACCT-TGTGCAGAGCAAATCTGTCATAGTTGATGTCAGAGAAACACT-GCAGGGTGAGGGTCATTCCAGGGTCCA-----GGATATGGCCTTGGTGAGTCAGCAGA--GAGGGCTTCTTGGACAGCCCTAGAGGGAAGGTGACAGCTA--- i mm10.chr7 C 0 T 4822 s canFam3.chr1 103000407 208 + 122678785 CACAGGGT-CCAGGGGGAAGT------CGGGGCTGGGTTGACCA-TCCAGATGCTGGGCAGGTC---------TGAGCTCCTCATCCTTGGTCAGAGCGAATCTATCAAAGCCAGCTTCTGAGCGACACT-GCAGGGTCAGGTTTTCTCCAGAATGAACCAGTGAGCCCGGCTGGGCCATGAG-------TGAAGGCTCCCTGTAG-GCACCTGCATGGAAGGGCACAGTGACA i canFam3.chr1 C 0 C 0 a score=381315.000000 s hg38.chr19_GL949747v2_alt 184430 153 + 729520 TTTAGGGGATGCGTACTCTC-TGGGGCCCGCTGGGGCCTGCAGGGAGAGCTCTCACCGGTCTCAACTCCATGCCTTCTGCCTTGTGCTTCTGGCCCAAG-AGGTCGGGGTCACTGACCACCCCGTGTC-CACCTAAGGCTTCCCTGGACACACAGC s panTro4.chr19 59116974 153 + 63644993 TTTAGGGGATGCGTACTCTC-TGGGGCCCGCTGGGGCCTGCAGGGAGAGCTCTCACCGGTCTCAACTCCATGCCTTCTGCCTTGTGCTTCTGGCCCAAG-AGGTCGGGGTCACTGACCACCCCGTGTC-CACCTAAGGCTTCCCTGGACACACAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55995342 140 + 60714840 TTTAGGGAATGCGCACTCT-----------CTGGGGCCTGCAGGGAGAGCTCG---CGGTCTCAACTCCATGCCTTCTGCCTTGTGCTTCTGGCCCAAG-AGGTCGGGGTCACCGACCACCCCGTGTC-CACCTAAGGCTTCCCTGGACACACAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102764099 141 - 106955855 TTTAGGGGATGCGCACT-------------CTGGGGCCTGCAGGGAGAGCTCTCACTGGTCTCAACTCCATGCCTTCTGCCTTGTGCTTCCGGCCCAAG-AGGTCGGGGTCACCGACCACCCCGTGTC-CACCTAAGGCTTCCCTGGACACACAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051703 141 + 64156825 TTTAGGGGATGCACACTCT-----------CTGGGGCCTGCAGGGAGAGCGCCCA-CGGTCTCAACTCCATGCCTTCTGCCTTGGGCTTCTGGCCCATGAAGGTCGGGGTCACCGACCACCCCGTGTC-CGCCTAAGGCTTCCCTGG--ACACAGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55077218 141 + 59248254 TTTAGGGGATGCACACACT-----------CTGGGGCCTGCAGGGAGAGCGCCCA-CGGTCTCAACTCCATGCCTTCTGCCTTGGGCTTCTGGCCCATGAAGGTCGGGGTCACCGACCACCCCGTGTC-CGCCTAAGGCTTCCCTGG--ACACAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47179375 142 + 51301725 TTTAGGGGATGCACTCTCT-----------CTGGGGCCTGCAGGGAGAGCTCTCACCGGTCTCAACTCCATGCCTTCTGCCTTGGGCTTCTGGCCCATGAAGGTTGGGGTCACCGACCACCCCGTGTC-CGCCTAAGGCTTCCCTGG--ACACAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884715 144 + 50890351 TTTAGGGGATGCACTCTCT-----------CCGGGGCCTGCAGGGAGAGCTCTCACCGGTCTCAACTCCATGCCTTCTGCCTTGGGCTTCTGGCCCATGAACGTCGGGGTTACTGACCACCCTGTGTC-TGCCTAAGGCTTCCCTGGACACACAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467960 130 + 49145316 TTAAGGGGATATACTCTGT----------------------GGGGATAGTTCTCA-CAGTCTCAGCTCCATGTCTTCTGCC-TGTGGTTCTGGCCCAAG-AGGTCAGTGTCACCAACCACCCTGTGTC-CACCTGAGGCTTCCCTGGACACACAGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 103000615 146 + 122678785 CTGAGGGGACCCAGACCCACATTGGGC---CCAAGGCCTACATGA--AGCTACCGTGGGTCCC--TCCCAAAGCCTCCAACCTGTAGTTCTGGCCCTAGGAGGCCAGTGTCAT---CCAGCCTGCATCACTCCCAGGGCTCTATTGGGCATATGGC i canFam3.chr1 C 0 I 1210 e mm10.chr7 3716911 4822 + 145441459 T a score=10476.000000 s hg38.chr19_GL949747v2_alt 184583 3 + 729520 AGG s panTro4.chr19 59117127 3 + 63644993 AGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55995482 3 + 60714840 AGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102764240 3 - 106955855 AGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051844 3 + 64156825 AGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55077359 3 + 59248254 AGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47179517 3 + 51301725 AGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884859 3 + 50890351 AGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45468090 3 + 49145316 AGG i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103000761 1210 + 122678785 I a score=1216363.000000 s hg38.chr19_GL949747v2_alt 184586 442 + 729520 GAGATGGGCAATGAGGGTGGGGGTTGTGGCCCTGCCTGTCACGGTCCCCAGCAGTGCAGATGAATTAGACCATTGAG-CCACAGAGCCTGGAGGGCAGATGGGTGTGCT-GGTATAAGGAGCCCCGGGCTCTGTGTTACAGGTCATGTGT-TCTCACCAGTGGCCTTGCAGGAGGGGAACAGCCCCTTCCCCAGGGCCTCGCTCTGCTCCCCCTGAAGGATGGGGCTGAGGGGACAGCAGGCTCTGGGGGCCTTTCAGACCACATTTGAGTCAAAATTTGACTTCCCCATAC-----TCTGCCTGCTTCCACCTCACCCAACTCTCATCCA-GGGGTGACCCTTGTTCTAGCACATGAGGCTGAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCACTGTTCTAATTCT---------------AGAGGC---------------AAGCCCCTTCCATGTCCTGAG-CTCTGTAAT- s panTro4.chr19 59117130 441 + 63644993 GAGATGGGCAATGAGGGTGGGG-TTGTGGCCCTGCCTGTCACGGTCCCCAGCAGTGCAGATGAATTAGACCATTGAG-TCACAGAGCCTGGAGGGCAGATGGGTGTGCT-GGTATAAGGAGCCCCGGGCTCTGTGTTACAGGTCATGTGT-TCTCACCAGTGGCCTTGCAGGAGGGGAACAGCCCCTTCCCCAGGGCCTCGCTCTGCTCCCCCTGAAGGATGGGGCTGAGGGGACAGCAGGCTCTGGGGGCCTTTCAGACCACATTTGAGTCAAAATTTGACTTCCCCATAC-----TCTGCCTGCTTCCACCTCACCCAACTCTCATCCA-GGGGTGACCCTTGTTCTAGCACATGAGGCTGAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCACTGTTCTAATTCC---------------AGAGGC---------------AAGCCCCTTCCATGTCCTGAG-CTCTGTAAT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55995485 434 + 60714840 GAGATGGGCAATGAGGGTGGGGGTTGTGGCCCTGCCTGTTACGGTCCCCAGCAGTGCAGGTGAATTAGACCACTGAG-CCACAGAGCCTGGAGGGCAGATGGGCGTGCTGGGTATAAGGAGCCCCGGGCTCTGTGTTACAGGTCATGTGT-TCTCACCAGTGGCCTTGCAGGAGGGGAACAGCCCCTCCCCCAGGGCCTCGCTCTGCTGCCCCTGAAGGATGGGGCTGAGGGGACAGCAGGCTCTGGGGGCCTTTCAGACCGTATTTGAGTC-AAATTTGACTTCCCCATAC-----TCTGCCTGCTTCCACCTCACCCAACTCTTATCCA-GGGGTGACCCTTGTTCTAGCACA------TGAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCAC--TTCTAATTCT---------------AGAGGC---------------AGGTCCCTTCTGTGTCCTGAG-CTCTGTAAT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102764243 384 - 106955855 GAGATGGGCAATGAGGGTGGGGGTTGTGGCCCTGCCTGTCACCGTCCCCAGCAGTGCAGATGAATTAGACGACTGAG-CCACAGAGCCTGG-GGGCAGGT-GGCATGCTAGGCATAAGGAGCCCTGGGCTCTGTGTTGCAGGTCATGTGT-TCTCACCAGTGGCCTTGCAGGAGGGGAACAGCCCCTCCCCC-GGGCCTCGCTCTGCTCCCCCTGAAGGATGGGGCTGAGGGGACAGCAGGCTCTGGGGGCCTTTCAGA-------------------------------------------------CCACCTCACCCAACTCAAATCCA-GGGGTGACCCTTGTTCTAGCA--------CGAGGCTAGAG----AGGGCAGGGCCTTAGGACACAGCC----CACTGTTCTCATTCT---------------AGAGGC---------------AAGCCCCTTCCGTGTCCTGAG-CTCTGTAAC- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051847 423 + 64156825 GAGATGGGCAATGAGGGTGGAGGTTGTGGCCCTGCCTGTCATGGTCCCCAGCAGTGCAGATG-ATTAGACCACTGAA-CCACAGAGCGTGGGGGTCAGATGGGCGTGCTGGGTATTAGGAGCCCTGGGCTCTGTGTTACAGGTCATGTGT-TCTCATCAGTGGCCTTGCAGGAGGGGAACAGCCCCTCCCCCAGGGCCTTGCTCGGCTCCCCCTGAAGGATGGGGCTGTGGGGACAGTAGGCTCTGGGGGCCTTTTAGACCACATTTGACTC------------CCCCAAGC-----TCTGCCTGCCTCCACCTCACCCAACTCAAATCCA-GGGGTGACCCTTGTTCTAGCACA------TGAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCACTGTTCTAATTCT---------------AGAGGC---------------AGGTCCCTTG-GTGTCCTGAG-CTCTGGGAT- i rheMac3.chr19 C 0 I 292 s macFas5.chr19 55077362 423 + 59248254 GAGATGGGCAATGAGGGTGGAGGTTGTGGCCCTGCCTGTCATGGTCCCCAGCAGTGCAGATG-ATTAGACCACTGAA-CCACAGAGCATGGGGGGCAGATGGGCGTGCTGGGTATTAGGAGCCCTGGGCTCTGTGTTACAGGTCATGTGT-TCTCATCAGTGGCCTTGCAGGAAGGGAACAGCCCCTCCCCCAGGGCCTTGCCCGGCTCCCCCTGAAGGATGGGGCTGTGGGGACAGTAGGCTCTGGGGGCCTTTTAGACCACATTTGACTC------------CCCCAAGC-----TCTGCCTGCCTCCACCTCACCCAACTCAAATCCA-GGGGTGACCCTTGTTCTAGCACA------TAAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCACTGTTCTAATTCT---------------AGAGGC---------------AGGTCCCTTG-GTGTCCTGAG-CTCTGGGAT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47179520 421 + 51301725 GAGATGGGCAATGAGGGTGGAGGTTGTGGCCCTGCCTGTCATGGTCCCCAGCAGTGCAGATG-ATTAGACCACTGAG-CCACAGAGCATGGAGGGCAGATGGGCGTGCTGGGTATAAGGAGCCCTGGGCTC--TGTTACAGgtcatgtgt-tctcatcagtGGCCTTGCAGGAGGGGAACAGCCCCTCCCCCAGGGCCTTGCTCGGCTCCCCCTGAAGGATGGGGCTGTGGGGACAGTAGGCTCTGGGGGCCTTTTAGACCACCTTTGACTC------------CCCCAagc-----tctgcctgcctccacctcaccCAACTCAAATCCA-GGGGTGACCCTTGTTCTAGCACA------TGAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCACTGTTCTAACTCC---------------AGAGGC---------------AGGTCCCTTG-GTGTCCTGAG-CTCTGTAAT- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884862 413 + 50890351 GAGATGGGCAATGAGGGTGGAGGTTGTGACCCTGCCTGTCATGGTCCCCAGCAGTGC---------AGACCACTGAG-CCAC--AGCATGGAGGGCAGATGGGCGTGCTGGGTATAAGGAGCCCTGGGCTCTGTGTTACAGGTCATGTGT-TCTCATCCGTGGCCTTGCAGGAGGAGAACAGCCCCTCCCCCAGGGCCTTGCTCGGCTCCCCCTGAAGGATGGGGCTGTGGGGACAGTAGGCTCTGGGGGCCTTTTAGACCACATTTGACTC------------CCCCAAGC-----TCTGCCTGCCTCCACCTCACCCAACTCAAATCCA-GGGGTGACCCTTGTTCTAGCACA------TGAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCACTGTTCTAATTCT---------------AGAGGC---------------AGGTCGCTTC-GTGTCCTGAG-CTCTGTAAT- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45468093 419 + 49145316 GAGATGGACAATGA-AGTGGGGCTTGTGGCCCTGCCTGTCATGATCCCCAGCAGTGCAGATGAATTAGACCATTGAGCCCACAGAGCCTGGAGGGCAGATGGGTGCACTGGGTGCAAGGAGTCCCGGACTC--------------TGTGT-TCTCACCAGTGGCCTCGAAGGAGGGGAAAAGCCCCTACCCCAGGGCCTCGCTCTGCTTCCCCTGAAGGATGGGGCTGAGGGGACAGCAGGCTCT-GGGGCCTTTCAGACCACATTTGGGTC-ACGTTTGACT-CCCCATGC-----TCTGCCTGCCTCCACCGTGCCCAACCCAAATCCA--GGGTGACCCTTGTTCTAGCACA------CGAGGTCAGAG----AGGTCAGGGCCTCAGGACACAGCCCAGTCACGGTTCTAATTCT---------------AGAGGC---------------AAGTGCCTTCTGTGTCCCGAG-CTCTGCAAC- i calJac3.chr22 C 0 C 0 s canFam3.chr1 103001971 447 + 122678785 GAGAAGGACAGTGAGGTTCAGGGTGCTGGTGCTGCTTCCCATGGTCCCCAGAGGTGCAGACAGCTTATAAAGT-----CCTCAGAGCCTACAAGATGGACAGATACTCAGGGGGTGACAGGGCCCAGGCCCTGTGTTCCCCGTCACGGGTCTCTCATGAGCAGCCTCACAG-------------CCCTGCCTAGGGCCTTGCTTTGCTCTCCCTGAAGGGTGGCCCCACAG---CAGAAATCCCT-GGGACCTTGCAGACCAGATGTGAGTC-----------TCCCCAGACCCCATTCCCTCTACCTTTTCCTCACAGATCCCATGTCCAAAGAGTGGCCATCGTACCAGGTCT------CCAggctggggaggtagggcagggcct-gggagccagtccaatgtcagttccagttctgcccctgcctgtcacagaggctgtgtgacccgggctgagacacttccctttcctgagtttctgtAAAT i canFam3.chr1 I 1210 C 0 e mm10.chr7 3716911 4822 + 145441459 T a score=389133.000000 s hg38.chr19_GL949747v2_alt 185028 139 + 729520 GCA-------TCTTTTCTTTCATGAGCCTTGCGATCAGGCGATGTTTATTCAGTGGTTACCACATCCAGGCATGCTGCCAG-----GAGGAGGGGAGTCGTGGGTGAAGCTGATAGGATTCCT-GCTGGACTCACAGAGCCTGGGTTAAT---GA s panTro4.chr19 59117571 139 + 63644993 GTA-------TCTTTTCTTTCATGAGCCTTGCGATCAGGCGATGTTTATTCAGTGGTTACCACATCCAGGCATGCTGCCAG-----GAGGAGGGGAGTCGTGGGTGAAGCTGATAGGATTCCT-GCTGGACTCACGGAGCCTGGGTTAAT---GA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55995919 142 + 60714840 GCA-------TCTTTTCTTTCATGAGCCTCACGATCAGGCGatgtttattcagtggttaccacatccaggcatgctgccag-----gaggaggggagtcttgggtgaagctgataggattcct-gctggactcacagagctTGGGTTAATGAAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102764627 142 - 106955855 GCA-------TCTTTTCTTTCGTGAGCCTCGCGATCAGGCGatgtttattcagtggttaccacatccaggcatgctgccgg-----gaggaggggagtcatgggtgaagctgataggattcct-gctggactcacggagcttGGGTTTATGAAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60052562 140 + 64156825 GCA-------TCTTTTCTTTAATCAACCTCGCGATCAGGCG--GTGTATCGAGTGGTTACCACATCCAGGCATGCCGCCAG-----GAGGAGAGGACTTGTGGGTGAAGCTGATAGGATTCCT-GCTGGACTCACGGAGCTTGGGTTACTGAAGA i rheMac3.chr19 I 292 C 0 s macFas5.chr19 55077785 140 + 59248254 GCA-------TCTTTTCTTTAATCAACCTCGCGATCAGGCG--GTGTATCGAGTGGTTACCACATCCAGGCATGCCGCCAG-----GAGGAGAGGACTTGTGGGTGAAGCTGATAGGATTCCT-GCTGGACTCACGGAGCTTGGGTTACTGAAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47179941 140 + 51301725 GCA-------TCTTTTCTTTCATCAGCCTCGCGATCAGGCG--GTTTATCGAGTGGTTACCACATCCAGGCATGCCGCCAG-----GAGGAGAGGACTTGTGGGTGAAGCTGATAGGATTCCT-GCTGGACTCACGGAGCTTGGGTTACTGAAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46885275 140 + 50890351 GCA-------TCTTTTCTTTCATCAGCCTCGCAATCAGGCG--GTTTATGGAGTGGTTACCACATCCAGGCATGCCGCCAG-----GAGGAGGGGACTTGTGGGTGAAGCTGATAGGATTCCT-GCTGGACTCACAGAACTTGGGTTACTGAAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45468512 142 + 49145316 GCA-------TCTTTTCTCTCATCAGCCTCATGATCAGAAGAAGTTTATTGAGCAA--GCCACATCCAGGCTTGCTGCCGGAAGGAGGGGAGGGGAGGGGTGGGTGAGGCCGGTAGGATTCCT-GCTGGACTCATGGAGCTTGCGTTAATGA--- i calJac3.chr22 C 0 C 0 s canFam3.chr1 103002418 144 + 122678785 GCAAATTTTTTCCTTCCTTCTACGAGGCTGGCAATCAAGCA-TGTTTAGTGAGAAGTCATCATATCCAGTCATGGTCCCCA-----GCACTGGAGATTCATTGTTGAGG-TGACACACTCCTTCCCTGGACTCAT-GTGCTGTGATTAGTGA--- i canFam3.chr1 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T a score=1583869.000000 s hg38.chr19_GL949747v2_alt 185167 718 + 729520 ------CACATTACCCATGTTTA-GATAGGAGGTAATTCTGCTCCGGTTTCG----------ACAAGTTGTAGGAAAGG-------AGGAAAACATG----CTCATAGCAGGTGAGCAGCGTACACCT---GTCATGGGAGTGAGGGGTCCTTCTGGGGGATGGAGAGAC-CAAGACGTGAACAGTGAGTGTG-------GCACGC--AGAGTGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAGAGTGAGCCAAAGGAAGCTGGGACCTTGTCATTCAGGGGACTTGTGCACCGTGAAGATTTATTGGATGC--TATGTTTAAGAAAATGGAAAATCCggcccggcacggtggtttgcacctgtaatcccagcactttgggaggcggaggtgggtggattatgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctc--tactaaagacacaaaaaatcagccaggtgtggtggtggacgcct-gtaatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagccgagattgcgccacagcactccagc-ctaggtgacagagtgagactccatctcaaa-------------------------------aaaaaaaaaaaa-----------aaaaCCGGGGAATCTTTAGAAAGCACAGTGGAAACAGATGTCTGTTTTTACAAGCCCATCAC--TGCACAGAATGCAATATGGGAGGGTTTCACTAATGGTTAACCATAACCACACTCC s panTro4.chr19 59117710 723 + 63644993 ------CACATTACCCATGTTTA-GATAGGAGGTAATTCTGCTCCGGTTTCG----------ACAAGTTGTAGGAAAGG-------AGGAAAACATG----CTCATAGCAGGTGAGCAGCGTGCACCT---GTCACGGGAGTGAGGGGTCCTTCTGGGGGATGGAGAGAC-CAAGACGTGAACAGTGAGTGTG-------GCACGC--AGAGTGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAAAGTGAGCCAAAGGAAGCTGGGACCTCGTCATTCAGGGGACTTGTGCACCATGAAGATTTATTGGATGC----TGTTTAAGAAAATGGAAAATCCggctgggcacggtggttcacacctgtaatcccagcactttgggaggcggaggtgggtggattatgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctg--tactaaagacacaaaaaatcagccaggtgtggtggtggaagccgagtag--ccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagctgagatcgcgccacagcactccagc-ctaggtgacagagtgagactccatctcaaa-----------------------aaacaaacaaacaaaaaaaa-----------caaaaCGGGGAGTCTTTAGAAAGCACAGTAGAAACAGATGTCTGTTTTTACAAGCCCATCAC--TGCACAGAATGCAATATGGGAGGGTTTCACTAATGGTTAACCATAACCACACTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55996061 719 + 60714840 ------CACATTACCCATGTTTA-GATTGGAGGTAATTCTGCTCCGGTTTCG----------ACAAGTTGTAGGAAAGG-------AGGAAAACATG----CTCATAGCAGGTGAGCAGCGTGCACCT---GTCATGGGAGTGAGGGGTCCTTCTGGGGGATGGAGAGAC-CAAGACGTGAACAGTGAGGGTG-------GCACGC--AGAGTGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAGAGTGAGCCAAAGGAAGCTGGGACCTTGTCATTCAGGGGACTTGTGCACCATGAAGATTTATTGGATGC--TATGTTTAAGAAAATGGAAAATCTggccgggcgcggtggttcacacctgtaatcccagcactttgggaggtggaggtgggtggattacgaggtcaggagttcgagaccagcctggccaacatggtgaaactccatctc--tactaaagacacaaaaaatcagccaggcgtggtggtggacgtgt-gtaatcccagctactcgggaggctgaggcaggagaatcacttgaacccggaaggtggaggttgcagtgagccgagatcgcgccacagcactccagc-ctaggtgacagagtgagactccgtctcaa--------------------------------aaaaaaaaaaaa-----------aaaaagaGGGAATCTTTAGAAAGCACAGTAGAAACAGGTGTCTGTTTTTACAAGCCCATCACTGTGCACAGAAGGCAATATGGGAGGGTTTTACTAATGGTTAACCATAACCACACTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102764769 747 - 106955855 ------CACATTACCCATGTTTA-GATAAGAGGTAATTCTGCGCCGGTTTCA----------ACAAGTTGTAGGAAA-----------AAAAACATG----CTCAT---AGGTGAGCAGCGTGCACCT---GTCACGGGAGTGAGGGGTCCTTCTGGGGGATGGAGAGAC-CAAGATGTGAACAGCGAGTGTG-------GCGCGCGGAGGGCGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAGAGTGAGCCAAAGAAAGATGGGACCTTGTCATTCAGGGGACTTGTGCACCATGAGGATTTATTGGATGC--TATGTTTAAGAAAATGGAAAATCCAgccgggcgcggtggttcacacctgtaatcccagcactatgggaggtggaggcgggtggattacaaggtcaggagttcgagaccagcctggccagcatggtgaaaccccgtctctatactaaagacacaaaaaattagccaggcgtggtgatggatgcct-gtaatcccagctactcgggaggctgaggcaggagaatcacttgaaaccaggaggtggaggttgcagtgagccaagatcgcgccacagcactccagcactaggtgacagagtgagactccgtctcacaaaaaaaaacaaaaaaaaaaaacaaaacaaacaaacaaaaaaaa-----------aaaaaCAGGGAATCTTTAGAAAGCACAGTAGAAACAGGTGTCTGTTTTTACAAGCCCATCAC--TGCACAGAATGCAATATGGGAGGGTTTTACTAATGGTTAACCATAACCACACGCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60052702 716 + 64156825 ------CACATTACCCATGGTTA-GACAGGAGGTAATTCTGCTCCGGTTTCG----------ACAAGTTGTAGGAAAGG-------AGGAAAACATG----CCCATAGCGGGTGAGCAGCGTGCACCT--GGTCACGGGAGTGAGGGGTCCTTCTAGGGGATGGAGAGAC-CAAGACGTGAACAGCGAGTGTG-------GTGCGTGGAGGGCGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAGAGTGAGCCAAAGAAAGCTGGGACCTTGTCATTCAGGGGTCTTGTGCACCATGAAGATTTATTGGATGTTATACGTTTAAGAAAATGGGAGATCTggctgggcgcggtggttcacacctgtaatcctagcactttgggaggtggaggtgggcagattacgaggtcaggagttcgagaccagcctggccaacatagtgaaaccctgtctc--tactaaagatataaaaaattaaccaggcgtggtggtggacacct-ggaatcccagctgctttggaggctaaggcaagagaatcactggaacccaggaggcggagtttgcagtgagccgagattgtgccacagcgctctagc-ctgggcgacagagtgag-ctccgtctcaaa-------------------------------aaaaaaagaaaa----------------TGGGGAATCTTTAGAAAGCACAGTAGAAACAGACGTCTCTTTATACAAGCCCAACAC--TGCACAGAATGCAATAT-GGAGGGTTTTACTGACGGTTAACCATAACCACACTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55077925 717 + 59248254 ------CACATTACCCATGGTTA-GACAGGAGGTAATTCTGCTCCGGTTTCG----------ACAAGTTGTAGGAAAGG-------AGGAAAACATG----CCCATAGCGGGTGAGCAGCGTGCACCT--GGTCACGGGAGTGAGGGGTCCTTCTAGGGGATGGAGAGAC-CAAGACGTGAACAGCGAGTGTG-------GTGCGTGGAGGGCGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAGAGTGAGCCAAAGAAAGCTGGGACCTTGTCATTCAGGGGTCTTGTGCACCATGAAGATTTATTGGATGTTATACGTTTAAGAAAATGGGAGATCTggctgggcgcggtggttcacacctgtaatcctagcactttgggaggtggaggtgggcagattacgaggtcaggagttcgagaccagcctggccaacatagtgaaaccctgtctc--tactaaagatataaaaaattaaccaggcgtggtggtggacacct-ggaatcccagctgctttggaggctaaggcaagagaatcactggaacccaggaggcggagtttgcagtgagccgagattgtgccatagcgctctagc-ctgggcgacagagtgagactccgtctcaaa-------------------------------aaaaaaagaaaa----------------TGGGGAATCTTTAGAAAGCACAGTAGAAACAGACGTCTGTTTATACAAGCCCAACAC--TGCACAGAATGCAATAT-GGAGGGTTTTACTGACGGATAACCATAACCACACTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47180081 725 + 51301725 ------CACATTACCCATGGTTA-GACAGGAGGTAATTCTGCTCCGGTTTCG----------ACAAGTTGtaggaaagg-------aggaaaacatg----CCCATAGCAGGTGAGCAGCGTGCACCT--GGTCACGGGAGTGAGGGGTCCTTCTAGGGGATGGAGAGAC-CAAGACGTGAACAGCGAGTGTG-------GTGTGTGGAGGGCGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAGAGTGAGCCAAAGAAAGCTGGGACCTTGTCATTCAGGGGTCTTGTGCACCATGAAGATTTATTGGATATTATACGTTTAAGAAAATGGGagatctggctgggcgcagtggttcacacctgtaatcctagcactttgggaggcggaggcgggcagattacgaggtcaggagttcgagaccagcctggccaacatagtgaaaccctgtctc--tactaaagatataaacaattaaccaggcatggtggtggacacct-ggaatcccagctgctttggaggctgaggcaggagaatcactggaacccgggaggcggagtttgcagtgagctgagattgtgccacagcactctagc-ctgggcgacagagtgagactccctctcaaa-------------------------------aaaaaaaaaaaa--------aggaaaatgggggAATCTTTAGAAAGCACAGTAGAAACAGACGTCTCTTTATACAAGCCCAACAC--TGCACAGAATGCAATAT-GGAGGGTTTTACTGACAGTTAACCATAACCACACTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46885415 733 + 50890351 ------CACATTACCCATGGTTA-GACAGGAGGTAATTCTGCTCCAGTTTCA----------ACAAGTTGTAGGAAAGG-------AGGAAAACATG----CCCATAGCGGGTGAGCAGCGTGCACCT--GGTCATGGGAGTGAGGGGTCCTTCTAGGGGATGGAGAGAC-CAAGACGTGAACAGCGAGTGTG-------GTGCGTGGAGGGTGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGATCTGAGAGTGAGCCAAAGAAAGCTAGGACCTTGTCATTCAGGGGTCTTGTGCACCATGAAGATTTATTGGATGTTATATGTTTAAGAAAATGGGAGATCTggctgggcgcggtggttcacacctgtagtcctagcactttgggaggcggaggcgggcggattacgaggtcaggagttcgagaccagcctggccaacatagtgaaaccccctctc--tactaaagatacaaaaaattaaccaggcgtggtggtaggcgcct-ggaatcccagttgctttggaggctgaggcaggagaatcactggaacccgggaggcggagtttgcagtgagctgagatggtgccacagcgctctagc-ccgggcgacagagtgagactccgtctcaaa-------------------------------aaaaaaaaaaaagaaagaaaaaagaaaATGGGGAATCTTTAGAAAGCACAGTAGAAACAGACGTCTGTTTATACAAGCCCAACAC--TGCACAGAATGTAATAT-GGAGGGTTTTACTGACGGTTAACCATAACCACACTCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103002562 424 + 122678785 CCAACAGACAATACAAATATTTAGGGGAGAAAACAATTCTACTATGGTCTAATAAGAGTCTTCCAAGTTGGAAGAAAAAAGAAAACAGGGAACCATGAGATTCGGTAACATGTAGATGTCATACAACCTGGGTCCTGGTCATGAGAGGTCCTTCTAGGGGATGGAATGATGGAAGGCACAAGCCAGGGGTATGCAGAGACGAGAGTGGGGGACATCCTCAACCAGAAAGATCTTGAGCTGTTCTCAGAACCGAGAGTGATC---AGGAGGCCAggaccttgtcacgca-ggattttgagccccaag------------------------taagca-------------------------------------------------tttggga------------------------------------------------------------------tttc--tact---------------------------------------t------------------------taaggcaatgggaagattttaacc----------------------------------------------agc-------------------------------------------------------------------------a------------------gagagtc-----------------aaacaaatttctgtctggaaaagactaACAC--TGTAAGAAAT------------------ACTGACAATTA---GTAGTAAAATTCC i canFam3.chr1 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e calJac3.chr22 45468654 0 + 49145316 C a score=113253.000000 s hg38.chr19_GL949747v2_alt 185885 42 + 729520 AGCGTGAGCCCAGCCACTAGGCAATGTGCTGATAAGGATTCT s panTro4.chr19 59118433 42 + 63644993 AGCGTGAGCCCAGCCACTAGGCAATGTGCTGATAAGGATTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55996780 42 + 60714840 AGCGTGAGCCCAGCCGCTAGGCGATGTGCTGATAAGGATTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102765516 42 - 106955855 AGTGTGAGCCCAGCCGCTAGGCGATGTGCTGATAAGGATTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60053418 42 + 64156825 ATTGTGAGCCCCACCGCTAGGTGATGTGCTAATAAGGATTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55078642 42 + 59248254 ATTGTGAGCCCCACCGCTAGGTGATGTGCTAATAAGGATTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47180806 42 + 51301725 ATTGTGAGCCCCACCGCTAGGTGATGTGCTAATAAGGATTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46886148 42 + 50890351 ATTGTGAGCCCCACCGCTAGGTGACGTGCTAATAAGGAGTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45468654 42 + 49145316 AGTGTGAACCCAGTTGCTAGGTGATATGCTGATCAGGAttct i calJac3.chr22 C 0 I 1844 s canFam3.chr1 103002986 34 + 122678785 AGCATTCATGTGGTCTCTGGGT--TGTGCTGATCAG------ i canFam3.chr1 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T a score=1145860.000000 s hg38.chr19_GL949747v2_alt 185927 501 + 729520 AAGTGGTTTATGTGGACTCCTCATG-ACCTATGACAC-ACATACGTTTACAGTGGAGTGGAACGAGGCAGGAGGGCTTCTCTTTGTCATAGTCTAC----------CAGCTCTGCAGAGGTG-TCAGCTACATCCGGATTGGCTCAGGGAGCGG-CCGTCAGAAGACTT-ACACGTGTTTAATAACTGAGGTTGTGTGTGTGTGGCAGGGGG--TGGGTAACTGTGA---TGAGTTTGGTGTGGCAGAGGGGGAGCCATAGCCTGTGAAGCTGGAAAGTGTATCAGGTTTGGTCATCAACAGGCTTGAACATGAAGTACAGGAACGTGCATCTTATTTTTGGAAGATGGAGCCCCGTTGGGGGAATTTGAGCAGT-----GGAGGGTCACAGCCAGGTAAGATGGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGACTGGAGTAGGGATGGGAGCCAG--TAGGGGGCCAGGAGGGAGGTTGGT-GCAGTG-CACAGACAGGG-CGTCCTCGGTCCCCAGCTGAGCT s panTro4.chr19 59118475 495 + 63644993 AAGTGGTTTATGTGGACTCCTCATG-ACCTATGACAC-ACATACGTTTACAGTGGAGTGGAACGAGGCAGGAGGGCTTGTCTTTGTCATAGTCTAC----------GAGCTCTGCAGAGGTG-TCAGCTACATCCGGATTGGCTCAGGGAGCGG-CCGTCAGAAGACTT-ACATGTGTTTAATAACTGAGGTTGTGTGTATGTGGCAGGGGG--TGGGTAACTGTGA---TGAGTTTGGTGTGGCA------CAGCCATAGCCTGTGAAGCTGGAAAGTGTATCAGGTTTGGTCATCAACAGGCTTGAACATGAGGTACAGGAACGTGCATCTTATTTTTGGAAGATGGAGCCCCGTTGGAGGAATTTGAGCAGT-----GGAGGGTCACAGCCAGGTAAGATGGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGACTGGAGTAGGGATGGGAGCCAG--TAGGGGGCCAGGAGGGAGGTTGGT-GCAGTG-CACAGACAGGG-CGTCCTCGGTCCCCAGCTGAGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55996822 498 + 60714840 GAGTGGTTTACGTGGACTCCTCATG-ACCTGTGACAC-ACATACATTTACAGTGGAGTGGAACGAGGCAGGAGGGCTTGTCTTTGTCATAGTCTAC----------AAGCTCTGCAGAGGTG-TCGGCTACATCCAGATTGGCTCAGGGAGCGG-CTGTCAGAAGACTTAACACTTGTTTAATAACTGAGGTGGTGTGTGTCTGGCAGGGAG--CGGGTAAC--TGA---TGAGTTTGGTGTGGCAGAGGGGGAGCCATAGCCTGTGAAGCTGGAAA--GTATCAGGTTTGGTCATCAACAGGCTTGAACATGAGGTACAGGAACGTGGATCTTATTTTTGGAAGATGGAGCCCCATTGAAGGAATTTGAGCCGT-----GGAGGGTCACAGCCAGGTCAGATTGTCAGAAGAGGCCTT------GGAAGTGATGAGAGGGATGGGCTGGAGTAGGGATGGGAGCCAG--TA-GGGGCCAGGAGGGAGGCTGAT-GTAGTG-CACTGACAGGGCCGTCTTCGGTCTCCAGCTGAGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102765558 500 - 106955855 AAGTGGTTTACGTGGACTCCTCATG-ACCTGTGACAC-ACATACATTTACAGTGGAGTGGAACGAGGCAGGAGGGCTTGTCTTTGTCATCGTCTAC----------GAGCTCTGCAGACGCG-TCGGCTACATCCAGATCGGCTCAGGGAGCAG-CCATCAGAAGACTT-ACACGTGTTTAATAACTGAGGTTGTGTGTGTCTGGCAGGGGG--TGGGTAACTGTGA---TGAGTTTGGTGTGGCAGAGGGGGAGCCATAGCCTGTGAAGCTGGAAAGTGTATCAGGTTTGGTCATCAACAGGCTTGAACGTGAGGCACA-GAACGTGAATCTTATTTTTGGAAGATGGAGCCCCGTTGAAGGAATTTGAGCAGT-----GGAGGGTCACAGCCAGGTAAGATTGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGACTGGAGTAGGGATGGGAGCCAG--TAGGGGGCCAGGAGGGAGGTTGAT-GCAGTG-CACAGACGGGG-CGTCCTCCATCTCCAGCTGAGCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60053460 492 + 64156825 CAGTGGTTTGTGTGGACTCCTCATG-ACCTGTGACAC-AAATATGTTTGCAGTTGAGTGGAATGAGGCAGGAGGGCTTGTCTTTATCATTGTCTAC----------GAGCTCTGCAGAGGCGCCCGGCTACATCCAGATTGGCTCAGGAAGCAG-CCATCAGAAGACTT-ACCAGTGTTCAATAACGGAGGGTGTGTGTGTCTGGCAGAGGG--TGGGTGACTGTGA---TGAGTTTGCTGTGGCAGAGCGGGAGCCATAGCCCCTGAAGCTGGAAAGCGTATCGGGTTTGGTCATCAACAGGCTTGAACATGAGGTACAGGAACGTGGATCCTATTTCTGGAAGATGGAGCCCCGTCGAAGGAATTTGAGCAGT-----GGAGGGTCAGAGCCAGGTGAGATTGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGATGGGAGCCGGG---------AG--TAGGAGGCCAGGAGGGA-GCTGAC-GCAGTG-CACAGACAGGG-CGTCCTTGGTCTCCAGCTGAGCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55078684 492 + 59248254 CAGTGGTTTGTGTGGACTCCTCATG-ACCTGTGACAC-AAATATGTTTGCAGTTGAGTGGAATGAGGCAGGAGGGCTTGTCTTTATCATTGTCTAC----------GAGCTCTGCAGAGGCGCCCGGCTACATCCAGATTGGCTCAGGAAGCAG-CCATCAGAAGACTT-ACCAGTGTTCAATAACGGAGGGTGTGTGTGTCTGGCAGAGGG--TGGGTGACTGTGA---TGAGTTTGCTGTGGCAGAGCGGGAGCCATAGCCCGTGAAGCTGGAAAGCGTATCGGGTTTGGTCATCAACAGGCTTGAACATGAGGTACAGGAACGTGGATCTTATTTCTGGAAGATGGAGCCCCGTCGAAGGAATTTGAGCAGT-----GGAGGGTCAGAGCCAGGTGAGATTGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGATGGGAGCCGGG---------AG--TAGGAGGCCAGGAGGGA-GCTGAC-GCAGTG-CACAGACAGGG-CGTCCTTGGTCTCCAGCTGAGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47180848 502 + 51301725 AAGTGGTTTGCGTGGACTCCTCATG-ACCTGTGACAC-AAATATGTTTGCAGTTGAATGGAACGAGGCAGGAGGGCTTGTCTTTATCATCGTCTACGAGCTCTGCAGAGCTCTGCAGAGGCG-TCGGCTACATCCAGATTGGCTCAGGAAGCAG-TCATCAGAAGACTC-ACAAGTGTTCAATAAcggagggtgtgtgtgtctggcAGGGGG--TGGGTGACTGTGA---TGAGTTTGCTGTGGCAGAGCGGGAGCCATAGCCTGTGAAGCTGGAAAGCGTATCGGGTTTGGTCATCAACAGGCTTGAACATGAGGTACAGGAACGTGGATCTTATTTCTGGAAGATGGAGCCCCGTCGAAGGAATTTGAGCAGT-----GGAGGGTCAGAGCCAGGTGAGATTGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGATGGGAGCCGGG---------AG--TAGGGGGCCAGGAGGGA-GCTGACGGCAGTG-CACAGACAGGG-CGTCCTCGGTCTCCAGTTGAGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46886190 491 + 50890351 GAGTGGTTTGCGTGGTGTCCTCATG-ACCTGTGACAC-AAACATGTTTGCAGTTGAGTGGAACGAGGCTGGAGGGCTTGTCTTTATCATAGTCTAC----------GAGCTCTGCAGAGGCG-TCGGCTACATCCAGATTGGCTCAGGGAGCAG-TCATCAGAAGACTT-ACAAGTGTTCAATAACGGAGGGTGTGTGTGTCTGGCAGGGGG--TGGGTGACTGTGA---TGAGTTTGCTGTGGCAGAGCGGGAGCCATAGCCTGTGAAGCTGGAAAGCGTATCGGGTTTGGTCATCAACAGGCTTGAACATGAGGTACAGGAACGTGGATCTTATTTCTGGAAGATGGAGCCCCGTCGAAGGAATTTGAGCAGT-----GGAGGGTCAGAGCCAGGTGAGATTGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGATGGGAGGCGGG---------AG--TAGGGGACCACGAGGGG-GCTGAC-GCAGTG-CACAGACAGGG-CGTCCTCGGTCTCCAGCTGAGCT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103003020 463 + 122678785 --------TATTTAAGCCTCACATGAACCTATCATACAAAACACATGTACAGTTGAGCAGAACGAGCCAGGATGGCTTCTCC--------ATCTGG----------CAGGT-TGGGGAGGAG-TTGGCCAGGTTCAGATTGGCTAAGGAGACAGCCCGAGAAAAGGCGT-GGAATTGTTGAGTAGCTCAGTGTGTGT-TGCTTGGGAAGGTATTTGGGTGAGAGGGGAGTTGTGTTTGCTGGGGC-------------TAGTGGGTTTAGC-----------TCTGGCCTGATGGTC-ACAGCCTTAAAGATGAGATAGTGCAACTTATATC---TTTCTGAAGGAGAG-----TGTGGGAGGGTTTTGAGCATCCCACAGGATGAGCCCAGCCTGGTGA-----TTAGTAGGGTCTTCTAATCTAGAGGTGGTGAGAGGAATGCAATGGGGAGAGG---GGGGCCTGCTTGGAGGAGCAGTGGGGAGGCTGAT-CTGCTGACGCACACAGA--CTTCTTGAGTCTTGCGATGGGTT i canFam3.chr1 C 0 I 48 e mm10.chr7 3716911 4822 + 145441459 T e calJac3.chr22 45468696 1844 + 49145316 I a score=267639.000000 s hg38.chr19_GL949747v2_alt 186428 115 + 729520 TAGACTGTGGGGATGGACCAGC-GGACACGGGTGGAGCCGGGTGAGGAGGGATGTGGGCAGAGAGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAAGAGTGTGA-------GGAGCTTTTCC s panTro4.chr19 59118970 115 + 63644993 TAGACTGTAGGGATGGACCAGC-GGACACGGGTGGAGCCGGGTGAGGAGGGATGTGGGCAGAGAGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAAGAGTGTGA-------GGAGCTTTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55997320 112 + 60714840 TAGACTGTGGGGATGGACCAGCGGGACACGGGTGGAGCCGGGTGACGAGGGATGGGGAC----CGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAAGAGCGTGA-------GGAGCTTTTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102766058 114 - 106955855 TAGACTGTGGGGATGGACCAGC-GGACACGGGTGGAGCCGGGTGAGGAGGGATGGGGGCAGCGCGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAA-AGTGTGA-------GGAGTTTTCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60053952 115 + 64156825 TGGACTGTGGGGATGGACCAGG-GCACATGGGTGGAGCCAGGTGAGGAGCAATGGGGGCAGAGCGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAAGAGTGTGA-------GGAGCTTTTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55079176 110 + 59248254 TGGACTGTGGGGATGGACCAGG-GGACATGGGTGGAGCCAGGTGAG-----ATGGGAGCAGAGCGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAAGAGCGTGA-------GGAGCTTTTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47181350 115 + 51301725 TGGACTGTGGGGATGGACCAGG-GGACACGGGTGGAGCCAGGTGAGGAGCAACGGGGGCAGAGTGGTTTGAATTTGTTCAGTGTGTGTGAAGCAGAAGAGCGTGA-------GGAGCTTTTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46886681 115 + 50890351 TGGACTGTGGGGATGGACCAGG-GGACACGGGTGGAGCCAGGTGAGGAGCGACGGGGGCAGAGCGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAAGAGCGTGA-------GGAGCTTTTCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19724006 107 - 122678785 -TGACTGTGGTGATGG-------TCGCATTAATGGA-----ATGAG--GGCTCCCGGGCAGAACTGTGTGGAGTCG-TCATCGTGTGTCATGTAGAAGGGTGTGAAGCACGGAGAGCTCTCTC i canFam3.chr1 I 64854 T 23254 e mm10.chr7 3716911 4822 + 145441459 T e calJac3.chr22 45468696 1844 + 49145316 I a score=433570.000000 s hg38.chr19_GL949747v2_alt 186543 182 + 729520 ACTCTCTGCCTTGGTTGATGGGAGGAACCAGTGGGGCTGCCGCAGGACAGACGACCCGCGTGGGAGAAGGAGGCTCGGGGAGATGTTTCTAAGAC--TTAACTTGCTCACAGAGGGAAGCACAA-GCTTCCTTCGAGCCTGGG---------CTTTGTTTTCCCAAACAGGTCCCTTCACTGACtttc-tttttt s panTro4.chr19 59119085 182 + 63644993 ACTCTCTGCCTTGGTTGATGGGAGGAACCAGTGGGGCTGCCGCAGGACAGACGACCCGCGTGGGAGAAGGAGGCTTGGGGAGATGTTTCTAAGAC--TTAACTTGCTCACAGAGGGAAGCACAA-GCTTCCTTCGAGCCTGGG---------CTTTGTTTTCCCAAACAGGTCCCTTCACTGACtttc-tttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55997432 184 + 60714840 ACTCTCTGCCTTGGTCGATGGGAGGAGCCAGTGGGGCCGCCACAGGACAGACGACCTGCGTGGGAGAAGGAGGCTGGGGGAGATGTTTCTAAGACTGTTAACTTGCTCACAGAGGGAAGCACAA-GCTTCCTTCGAGCCTGGG---------TTTTGTTTTCCCAGACAGATCCCTTCACTGACtttc-tttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102766172 184 - 106955855 ACTCTCTGCCTTGGTTGATGGGAGGAGCCAGTGGGGCCGCCGCAGGACAGATGACCCGCGTGGGAGAAGGAGGCTGGGGGAGATGTTTCTAAGACTGTCAACTTGCTCACAGAGGGAAGCACGA-GCTTCCTTCGAGCCTGGG---------TTTTGTTTTCCCAAACAGGTCCCTTCACTGACtttc-tttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60054067 182 + 64156825 ACTCTCTGCGTTGGTTGATAGGAGGAGCCGGTGGGGCCGCCACAGGACAGACGGCCCGCATGGGAGAAGGAGGCCTGGGGAGGTATTTCTAAGACCGTT---TCGTTCACAGAGGGAAGCACAA-GCTTCCTTCAAGCCTGGG---------TTTTGTTTCCCCAAACAGGTGCCTTCCCTGACtttcttttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55079286 181 + 59248254 ACTCTCTGCGTTGGTTGATAGGAGGAGCCAGTGGGGCCGCCACAGGACAGACGGCCCACATGGGAGAAGGAGGCCTGGGGAGGTATTTCTAAGACCGTT---TCGTTCACAGAGGGAAGCACAA-GCTTCCTTCAAGCCTGGG---------TTTTGTTTTCCCAAACAGGTGCCTTCCCTGACTGAC-tttttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47181465 178 + 51301725 ACTCTCTGCTTTGGTTGATAGAAAGAGCCAGTGGGGCCGCCACAGGACAGACGACCCGCATGGGAGGAGGCGGCCTGGGGAGGTGTTTCTAAGACCGTT---TCGTTCACAGAGGGAAGCACAA-GCTTCCTTTGAGCCTGGG---------TTTTGTTTCCCCGAACAGGTGCCttccctgact----tttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46886796 179 + 50890351 ACTGTCTGCGTTGGTTGATAGGAGGAGCCGGTGGGGCCGCCACAGGACAGGCGACCCGCGTAGGGGGAGGAGGCCTGGGGAGGTGTTTCTAAGACCGTT---TCGCTCACAGA--GAAGCACAA-GCTTCCTTCGAGCCTGGG---------TTTTGTTTCCCTGAACAGGTGCCTTCCCTGACtttc-tttttt i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103003531 188 + 122678785 ACTCTCTGTCT--GGTGCCTGGAGGAGCCAGTGGGGCCATCCCAGGA-GGATGATCCA---GGAAAAGGCAGGGACTGGGAGGTGATTTGAAGACAGATCATCATTTCTCAGAAGGAAGCATGACCCTTCCTCCTACCCTGGGATTGTGGATTTTCTTTGTACCCCACACTTCCCTTCACTGACTTCC-TTATTT i canFam3.chr1 I 48 T 5795 e mm10.chr7 3716911 4822 + 145441459 T e calJac3.chr22 45468696 1844 + 49145316 I a score=89658.000000 s hg38.chr19_GL949747v2_alt 186725 37 + 729520 ------gagacggagtctcgctctgtcgcccaggctggagtgc s panTro4.chr19 59119267 37 + 63644993 ------gagacggagtctcgctccgtcgcccaggctggagtgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55997616 37 + 60714840 ------gagacggagtctcaatctgtcgcccaggctggagtgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102766356 37 - 106955855 ------gagacggagtctcgctctgttgcccaggctggagtgc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60054249 43 + 64156825 tttttagagacggattctcgctctgtcgcccaggctggagtgc i rheMac3.chr19 C 0 M 651 s macFas5.chr19 55079467 43 + 59248254 tttttagagacggattctcgctctgtcgcccaggctggagtgc i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47181643 43 + 51301725 ttttttgagacggagtctcgctctgtcacccaggctggagtgc i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46886975 43 + 50890351 ttttaagagacggagtctcgctctgtcccccaggctggagtgc i chlSab2.chr6 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e calJac3.chr22 45468696 1844 + 49145316 I a score=910.000000 s hg38.chr19_GL949747v2_alt 186762 1 + 729520 a s panTro4.chr19 59119304 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55997653 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102766393 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 46887018 1 + 50890351 a i chlSab2.chr6 C 0 I 10 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e calJac3.chr22 45468696 1844 + 49145316 I e papAnu2.chr19 47181686 1 + 51301725 I e macFas5.chr19 55079510 1 + 59248254 I e rheMac3.chr19 60054292 651 + 64156825 M a score=646446.000000 s hg38.chr19_GL949747v2_alt 186763 588 + 729520 gtggcgcgatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcccggctaatcttttgtatttttagtagagacggggtttcaccgtgctagccaggatggtctcgatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccatcgcgcccagccAACTTTCCTGTTAATGAGTAGCA--CTCTTTTtttctttcttttctttcccccttttttttttttttt-----agacatggtcttgctctgtttcccaggctggagtgcagtggcgtgaccccagctcactacaacctccacctcctgggttcaggtgattgtcctgcttcagcctcccaagtagct-ggattacaggcacgtgcaaccacgcctggctaatttttgtatttttagtagagacagagtttcaccatgttggccaggctattctcgaactcctgaccttaaatcatcctcttgccttggccccccaaagtgttaggattacaggcatgagccatcatgctcggc s panTro4.chr19 59119305 580 + 63644993 gtggcgcgatctcggctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcccggctaatcttttgtatttttagtagaggcggggtttcaccgtgttagccaggatggtctcaatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagccAACTTTCCTGTTAATGAGTAGCA--CTCTTTTtttctttcttttctttcc-----tttttttttcttt-----agacacggtcttgctctgtttcccaggctggagtgcagtggcgtga---cagctcactacaacctccacttcctgggttcaggtgattgtcctgcttcagcctcccaagtagct-ggattacaggcacgtgccaccatgcctggctaatttttgtatttttagtagagacagagtttcaccatgttggccaggctggtcttgaactcctgaccttaaatcatcctcttgccttggccccccaaagtgttaggattacaggcatgagccatcatgcttggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55997654 573 + 60714840 gtggcgcgatctcggctcactgcaagctccgcttccggggttcacgccattctcctgcctcagcctccggagtagctgggactacaggcacccgccaccacgcccggctaattttttgtatttttagtagagacagagtttcactgtgttagccaggaaggtctcaatctcctgacctcatgacctgcccgcctcggccttccaaagtgctgggattacaggcatgagccactgcgcccagccAGCTTTCCTGTTAATGAGTAGCACTCTCtttttttctttctcttctttcctttcttttttttttttttttaaaagacatggtcttgctctgtttcccaggctggagtgcagtggcgtgatctcagctcactacaacctccacctcctgggttcaggtgattgtcctgcctcagcctcccaagtagct-ggattacaggcacgtgccaccacgcctcactaatttttgtatttttagtagagacggagtttcaccatgttggccagcctgttcttaaac----------------------tgccttggcctcccaaagtgttaggattacaggcatgagccaccatgcttggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102766394 518 - 106955855 gtggcgcgatctcggctcactgcaagctccacctcccaggttcac-ccagtctcctgcctcagcctcccgagtagctgggactacaggtgcccaccaccacgcccggctaatgttttgtttcttcagtagagacagagtttcactgtgttagccaggatggtctcaatctcctgacctcgtgacccgcccgtctcggcctcctaaagtggt-ggattacaggcgtgaggcaccgcacccggccAACtttcct----------------------------------------------attttttttttta-----agacgcggtcttg--ctgtttcccagggtggatggcagtggcatgatctcagctcactaccacctccacctcctcggttcaggtgattgtcctgcctcagcctcccaagtagct-ggattacaggcacgtgccaccacgcctggctaatttttgtatttttagtagagatggagtttcaccatgttggccaggctgttctcaaac----------------------tgcgttggcctcccaaagtgttaggagtacaggcatgagccaccatgcttggc i nomLeu3.chr10 C 0 M 1151 s macFas5.chr19 55079511 568 + 59248254 gtggcgcgatctcggctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcg-ccgccaccatgcccggctaa-tttttgtatttttactagagacagggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgattcgcctgcctcggcctcccaaagtgctggggttacaggcgtgagccaccgcgcccggccAACTTTCCTGTTA--GAGTAGCA--Ctctctctt------ttttctt--------ttcttttttttca-----agacacggtcttgctctgtttcccatgctggagtgcagtggcatgatctcagctcactggaacctccacctcctgggttcaggtgattgtcctgcctcagcctcccaagtagct-ggattacaggtgtgtgccaccacacctggctaatttttgtatttttagtagagac--agtttcaccatgttggccaggctgttctcgaactcctgacttcaattaatcctcttgccttggcctcccaaagtgttaggattacaggcgtgagccaccatgcttggc i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47181687 578 + 51301725 gtggcacgatctcggctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggaccacaggcgcccgccaccacgcccggctaattttttgtatttttactagagacggggtttcaccgtgttatgcaggacggtctcgatctcctgacctcgtgattcgcccgcctcagcctcccaaagtgctggggttacaggcgtgagccaccgcgcccggccaactttccTGTTA--GAGTAgca--ctctctcttt-tttcttttctt--------ttcttttttttca-----agacacaatcttgctctgtttcccatgctggagtgcagtggcgtgatctcagctcactggaacctccacctcctgggttcaggtgattgtcctgcctcagcctcccaagtagctaagattacaggtgtgtgccaccacacctggctaatttttgtatttttagtagagacagagtttcaccatgttggccaggctgttctcaaactcctgacttcaattaatcctcttgccttggcctcccatagtgttaggattacaggcgtgagccaccatgtttggc i papAnu2.chr19 I 1 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e calJac3.chr22 45468696 1844 + 49145316 I e chlSab2.chr6 46887019 10 + 50890351 I e rheMac3.chr19 60054292 651 + 64156825 M a score=163217.000000 s hg38.chr19_GL949747v2_alt 187351 213 + 729520 cTCTTTTttctttttctttttttttttttttgtttttgagacagagtcttgctctgtcacccaggctggagtgcagtggcgtgatctcagctcactgcagcctccacctcccaggtgccagcgattctcctgcctcaatctcccagttagctgggattacagatgcgcgccaccatatccagctaaattttgtattttttagtaaagacagag s panTro4.chr19 59119885 211 + 63644993 cTCTTttttctttttc--tttctttttttttgtttttgagacagagtcttgctctgtcacccaggctggagtgcagtggcgtgatctcagctcactgcagcctccacctcccaggttccagcgattctcctgcctcaatctcccagttagctgggattacagacgtgcgccaccatatccagttaaattttgtattttttagtaaagacagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55998227 201 + 60714840 ctcttttttctttttc------------tttgtttttgagacagagtcttgctctgtcgcccaggctggagtgcagtggcgcgatctcagctcactgcagcctccacttcccaggttccagcgatgctcctgcctcaatctcccggttagctgggattacagatgcgcgccaccatgtctggctaaattttgaattttttagtagagatggag i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55080079 197 + 59248254 ctcttttttctttttc----------------tttttgagatagagtcttgctctgtcacccaggctggagtgcagtggtgccatctcagctcactgcagcctccacctcccaggttccagcaattctcctgcctcagcctccctggtagctgggattacagatgcgcgccaccatgtccggctaatttttgtattttttagtagagatggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47182265 197 + 51301725 ctcttttttctttttc----------------tttttgagatagagtcttgctctgtcacccaggttggagtgcagtggtgccatctcagctcactgcagcctccacctcccaggttccagcaattctcctgcctcagcctccctggtagctgggattacagatgcgtgccaccatgtccggctaatttttgtattttttagtagagatggag i papAnu2.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I e rheMac3.chr19 60054292 651 + 64156825 M a score=687469.000000 s hg38.chr19_GL949747v2_alt 187564 541 + 729520 ttttaccatgttggccaggctggtcttgaactcctgacctcaggtgatccgcccgcttcagcctcccaaagtgttgggattacgggcatgagccaccatgctcggcctcttttttctttgcttaaaagatgaggcctgttgcccaggctggagtgcagtggcactatcatagctcactgcagccttgacatcgtggctcaggtgatcctcccgcctcaggctcccgag------------tggctgggactacagacgtgcacctccacagccactacttatttttgtaGCGatgtctatcagctggtgaatagag----aaagtgtggtatatccttacaacaaaatattattcaaccgtagaaaggaatgaagtactcatacatgctacatgtgtgaaccttgataatatactagataaaagcagtcaggaaaaaaaggtcacatatgacgttatttcatttataagaagtatccagcctgggtgtggtggctcattgcctgtaatccagcactttgggaggccaaggcaggtggattgcctgagtttaggagtt s panTro4.chr19 59120096 540 + 63644993 ttttaccatgttggccaggctggtcttgaactcctgacctcaggtgatccgcccgcctcagcctcccaaagtgttgggattacgggcatgagccaccatgctcagcctcttttttctttgcttaaaagatgaggcctgttgcccaggctggagtgcagtggcactatcatagctcactgcagccttgacatcgtggctcaggtgatcctcccgcctcaggctcccgag------------tggctgggactacagacatgcacctccacagccactacttatttttgtaGCGatgtctatcagctggtgaatagag----aaagtgtggtatatccttacaacaaaatattattcaaccgtagaaaggaatgaagtactcatacatgctacatgtgtgaaccttgataatatactagataaaagcagtcaggaaaaaaaggtcacatatgacgttatttcatttataagaagtatccagcctgggtgtggtggctca-tgcctgtaatccagcactttgggaggccaaggcaggtggattgcctgagtttaggagtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55998428 544 + 60714840 tttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatctgcccacctcagcctcccaaagcgttgggattacgggcatgagccaccatgctcagcctcttttttctttgcttaaaagatgaggcctgttgcccaggctggagtgcagtggcactatcatagctcactgcagccttgacatcgtggctcaagtgatcctcctgcctcaggctcccgag------------tggctgggactacaaacatgcacctccacagccactacttatttttgtaGCaatgtctatcagttggtgaatagagaaacaaagtgtggtatatccttacaataaaatattattcaaccgtaaaaaggaatgaagtactcatacatgctacatgtgtgaaccttggtaatatactagataaaagcagtcaggaaaaaaaggtcacatacgacattatttcatatataagaagtatccaggctgggtgtggtggctca-cgcctgtaatccagcactttgggaggccgaggcaggtggattgcctgagcttaggagtt i ponAbe2.chr19 C 0 I 1191 s rheMac3.chr19 60054944 556 + 64156825 tttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatctgcccacctcggcctcccaaagcgttgggattatgggcatgagtcaccacacctggcctcttttttctttgctgaaaagaaaaggtttgttgcccaggctggagtgcagtggcactatcctagctcactgcagccttgacatcctgactcaagtgatcctcccgcctcaggctcccgagtggctgggactatggctgggactacagacatgcaccaccatagccacgacttatttttgtaGCaatgtctatcagctgatgagtagagaaacaacgtgtggtatatccttacaacaaaatcttattcaaccatacaaaggaatgacacactcacacatgctacacaggtgaaccttgataatatattagatgaaagcagtcaggaaaaaagggtcacatatgacgttatttcatttataagaaatatccaggctgggtgtggtggctca-cgcctgtaatcttgcactttgggaggccgaggcaggtgggttgcctgagtttaggagtt i rheMac3.chr19 M 651 C 0 s macFas5.chr19 55080276 544 + 59248254 tttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccgcctcggcctcccaaagcgttgggattatgggcatgagccaccacacctggcctcttttttctttgctgaaaagaaaaggtttgttgcccaggctggagtgcagtggctctatcctagctcactgcagccttgacatcctgactcaagtgatcctcccgcctcaggctcccgag------------tggctgggactacagacatgcaccaccatagccacgacttatttttgtaGCaatgtctatcagctgatgagtagagaaacaacgtgtggtatatccttacaacaaaatcttattcaaccacacaaaggaatgacacactcacacatgctacacaggtgaaccttgataatatattagatgaaagcagtcaggaaaaaaaggtcgcatatgacgttatttcatttataagaaatatccaggctgggtgtggtggctca-cgcctgtaatcttgcactttgggaggccgaggcaggtggattgcctgagcttaggagtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47182462 544 + 51301725 tttcaccatgttggccaggctggtcttgaactcctgacttcagatgatccgcccgcctcagcctcccaaagcgttgggattacaggcgtgagccaccacacctggcctcttttttctttgcttaaaagATAAggtctgctgcccaggctggagtgcagtggcactatcctagctcactgcagccttgacatcctggctcaagtgatcctcccgcctcaggctcccgag------------tggctggggctacagacatgcactaccatAGCCACTACTTATTTTTGTAGCAATGTCTATCAGCTGATGAGTAGAGAAACAACGTGTGGTATATCCTTACAACAAAATCTTATTCAACCATACAAAGGAATGACATACTCACACATGCTACACAGGTGAACCTTGATAATATATTAGATGAAAGCAGTCAGGAAAAAAGGGTCACATATGACgttatttcatttataagaaatatccaggctgggtgtggtggctca-cgcctgtaatcttgcactttgggaggccgaggcaggtggattgcctgagcttaggagtt i papAnu2.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I a score=508204.000000 s hg38.chr19_GL949747v2_alt 188105 587 + 729520 tgagaccagcctgggcaacatggtgaaataccatctctaccaaaaatacaaaaaattcacccggcatggtggcatgtgcctgtgatcccagctacttgggaggctcaggtggcaggatcgcttgagcctgggaggcagaggttacagtgagccgagatcacaccactgcactccaacctgggtgacagagtgagtccctgtctc------aaaaaaaaaaaaaaaaggtattcaaagaaggccaatcgatagaggcagaaagtaggttaattgttgcatgggattaggtgggagtgattgcttgatgtaaactcggtttccttctcggtatgataaaaatgtttcggaatgagatagaggtgatgcttacaccatattgtgaatttactaaatgccacaaaatAGAGTTGTATCTCAATAAAAATATATTTGTTGggccgggtgcggtggctcacgcctataatcccagcactttgggaggcaggcagatcaagaggtcaggagttcaagaccagcctggc---------aaaaccctgtctctactaaaaatataaaacttagccaggcgtggtggcatgtgtctgtaatcccagctactc s panTro4.chr19 59120636 602 + 63644993 tgagaccagcctgggcaacatggtgaaataccatctctaccaaaaatacaaaaaattcacccggcgtggtggtatgtgcctgtgatcccagctacttgggaggctcaggtggcaggatcgcttgagcctgggaggcagaggttacagtgagccgagatcacaccactgcactccaacctgggtgacagagtgagtccctgtctcaaaaaaaaaaaaaaaaaaaaaaggtattcaaagaaggccaatcgatagaggcagaaagtaggttaattgttgcatgggattaggtgggagtgattgcttaatgtaaactcggtttccttctcagtatgataaaaatgtttcggaatgagatagaggtgatgcttacaccatattgtgaatttactaaatgccacaaaatAGAGTTGTATCTCAATAAAAATATATTTGTTGggccgggtgcggtggctcacgcctgtaatcccagcactttgggaggcaggcggatgaagaggtcaggagttcaagaccagcctggccagcatggtgaaaccctgtctctactaaaaatacaaaacttagccaggcgtggtggcatgtgtctgtaatcccagctactc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60055500 591 + 64156825 agagaccagcctgggcaacatggtgaaataccacctctacc--aaacacaaaaaattcgccaggcatggtggcatgtgcctgtggtcccatctacttgggatgctcaggaggcatgatcacttgagcctgggaggcagaggttacagtgagcagagatcacgccactgtactccaacctgggtgacagagtgaggccctgtctc---------aaaaaaaaaaaaaggtattcaaagaaagccaatcgatagaggcagaaagtaggttaattgttgcatgggattaggtgggagtgattgctgaatgtaaactgggtttccttctcagtatgataaaaatgttttggaatgagatagaggtgatgcttacaacatattgtgaatttactaaatgccaccaaatagtGTTGTATCTCAATAAAAATATATTTGTTGggtcgggtgcggtggctcatgcctataatcccagtgctttgggaggcgggcggatcacgaggtcaggagttcgagaccagcctggccagcatggtgaaaccctgtctctactaaaaatacaaaaattagccaggtgtggtggcatgtgcctgtaatcccagctactc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55080820 592 + 59248254 cgagaccagcctgggcaacatggtgaaataccacctctacc--aaacacaaaaaattcgccaggcatggtggcatgtgcctgtggtcccagctacttgggaggctcaggaggcaggatcacttgagcctgggaggcagaggttacagtgagcagagatcacgccactgtactccaacctgggtgacagagtgagaccctgtctc--------aaaaaaaaaaaaaaggtattcaaagaaagccaatcgatagaggcagaaagtaggttaattgttgcatgggattaggtgggagtgattgctgaatgtaaactgggtttccttctcagtatgataaaaatgttttggaatgagatagaggtgatgcttacaacatattgtgaatttactaaatgccaccaaatagtGTTGTATCTCAATAAAAATATATTTGTTGggtcgggtgcggtggctcatgcctataatcccagtgctttgggaggcgggcggatcacgaggtcaggagttcgagaccagcctggccagcatggtgaaaccctgtctctactaaaaatacaaaaatcagccaggtgtggtggcatgtgcctgtaatcccagctactc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47183006 595 + 51301725 cgagaccagcctgggcaacatggtgaaataccaccTCTACC--AAAcacaaaaaattcgccaggcatggtggcatgtgcctgtggtcccagctacttgggaggctgaggaggcaggatcacttgagcctgggaggcagaggttacagtgagcagagatcacgccactgtactccaacctgagtgacagagtgagaccctgtctc-----aaaaaaaaaaaaaaaaaggtattcaaaGAAAGCCAATcgatagaggcagaaagtaggtTAATTGTTGCATGGGATTAGGTGGGAGTGATTGCTGAATGTAAACTGGGTTTCCTTCTCagtatgataaaaatgttttggaatgaGATAGAGGTGATGCTTACAACATACTGTGAATTTACTAAATGCCACCAAATAGtgttttatctcaataaaaatatatttgttgggtcgggtgcggtggctcatgcctataatcccagtgctttgggaggcgggcggatcacaaggtcaggagttcgagaccagcctggccagcatggtgaaaccctgtctctactaaaaatacaaaaattagccaactgtggtggcgtgtgcctgtaatcccagctactc i papAnu2.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I a score=8864.000000 s hg38.chr19_GL949747v2_alt 188692 17 + 729520 gggaggctgaggtagaA s panTro4.chr19 59121238 17 + 63644993 gggaggctgaggtagaa i panTro4.chr19 C 0 C 0 s macFas5.chr19 55081412 17 + 59248254 gggaggctgaggcagga i macFas5.chr19 C 0 I 10 s papAnu2.chr19 47183601 17 + 51301725 gggaggctgaggcagga i papAnu2.chr19 C 0 I 10 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I e rheMac3.chr19 60056091 0 + 64156825 C a score=7441.000000 s hg38.chr19_GL949747v2_alt 188709 87 + 729520 TGGAGCGAGACTCCGTCTCAAAAAAAAatatatatatatgtaaatatatatatgttgggcatagtggtgcacacatgtagtcccagc s panTro4.chr19 59121255 85 + 63644993 cggagcgagactccgtctc--aaaaaaatatatatatatgtaaatatatatatgttgggcatagtggtgcacacatgtagtcccagc i panTro4.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I e papAnu2.chr19 47183618 10 + 51301725 I e macFas5.chr19 55081429 10 + 59248254 I e rheMac3.chr19 60056091 0 + 64156825 C a score=1083.000000 s hg38.chr19_GL949747v2_alt 188796 5 + 729520 tactt s panTro4.chr19 59121340 5 + 63644993 tgctt i panTro4.chr19 C 0 C 0 s macFas5.chr19 55081439 5 + 59248254 aacct i macFas5.chr19 I 10 C 0 s papAnu2.chr19 47183628 5 + 51301725 aacct i papAnu2.chr19 I 10 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I e rheMac3.chr19 60056091 0 + 64156825 C a score=77281.000000 s hg38.chr19_GL949747v2_alt 188801 122 + 729520 gggaggctgaggcaggagaaccacttgaacctgggaagcggaggttgcagtgagccgagactgcaccattgcactcctgcctgggcaaaaagagtgaaactccatctcgaaaaaaaaaaaaa------------- s panTro4.chr19 59121345 121 + 63644993 gggaggctgaggcaggagaaccacttgaacctgggaagtggaggttgcagtgagccgagactgcaccattgcactcctgcctgggcaaaaagagtgaaactccatctcg-aaaaaaaaaaaa------------- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60056091 135 + 64156825 gggaggctgaggcaggagcaccacttgaacctgggaggtggagactgcagtgagccgagattgcaccattgcactcctgcctgggcaacaagagtgaaactccatctcaaaaaaaaaaaaaagaaaagaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55081444 103 + 59248254 --------------------------------gggaggtggagactgcagtgagccgagattgcaccattgcactcctgcctgggcaacaagagtgaaactccatctcaagaaaaaaaaaaagaaaagaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47183633 102 + 51301725 --------------------------------gggaggtggagactgcagtgagccgagattgcaccattgcactcctgcctgggcaacaagagtgaaactccatctcaag-aaaaaaaaaagaaaagaaaaaaa i papAnu2.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I a score=348529.000000 s hg38.chr19_GL949747v2_alt 188923 323 + 729520 CCACACACACACAC--GTAGATAAAATCAAAT---ATTctgtattccataaatatgtacaattattatttttcaattaaaaaCTCTTAAgctgggcacagtggctcatgcctgtaat------------------------------------------------------------cccaacactttgggaggcggagatgggaggctcttgagcccacaagtttgaggccagtttgggcaacatcgtgagatcccattgctacaaaaaaatttaaaaTATATTTTTAAAAAACTCTAATAcagtagtccccctttatctgtaattttctttctgtgttttcagttacctggtggtcaaccatggtccaaaaatattaaatagaaaa s panTro4.chr19 59121466 323 + 63644993 CCACACACACACAC--GTAGATAAAATCaaat---attctgtatgccataaatatgtacaattattatttgtcaattaaaaaCTCTTAAgctgggcacagtggctcatgcctgtaat------------------------------------------------------------cccaacactttgggaggcggagatgggaggctcttgagcccacaagtttgaggccagtttgggcaacatcgtgagaccccattgctacaaaaaaatttaaaaTATATTTTTAAAAAACTCTAATAcagtagtccccctttatctgtaattttccttctgtgttttcagttacctggtggtcaaccatggtccaaaaatattaaatagaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102768084 326 - 106955855 CCACACACACACACTAGTAGATAAAATCaaataccattctgtatgccataaatatgtacaattattatttgtcaattaaaaa--CTTAAgctgggcacaatggctcatgcctgtaat------------------------------------------------------------cccaacactttgggaggcagagatgggaggctcttgagtccagaagttcgaggccagtttgggcaacatagtgagaccccatctctacaaaaaaaTTTAAAATATATTTTTAAAAAACCCTAATAcagtagtccccctttatctgtaattttctttctgtgttttcggttacctggtggtcaaccatggtccaaaaacattaaatagaaaa i nomLeu3.chr10 M 1151 C 0 s rheMac3.chr19 60056226 312 + 64156825 CCACACATACACTA--GTAGATAAAGTCAAAT---ATTCtgtaccctataaatatgtacaattattatttgtcaattaaaaaCTCT------------------------------TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-----------------------------------------NNNNNNNTgaggccagtttgggcaacatagtgagaccccatctctacaaacaattttaaaatATATTTTTAAAAAACTCTAATAcagtagtccccctttatctgtaattttctttctatgttttcagtaacctggtggccaaccatggtccaaaaatattaaatagaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55081547 323 + 59248254 CCACACATACACTA--GTAGATAAAATCAAAT---ATTctgtaccctgtaaatatgtacaattattatttgtcaattaaaaaCTCTTAAgctgggcacagtggctcatgcctgtaat------------------------------------------------------------cccaacactttgggaggtggagatgggaggctcttgaacccaggagtttgaggccagtttgggcaacatagtgagaccccatctctacaaacaattttaaaatATATTTTTAAAAAACTCTAATAcagtagtccccctttatctgtaattttctttctatgttttcagtaacctggtggccaaccatggtccaaaaatattaaatagaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47183735 323 + 51301725 ccacacatacACTA--GTAGATAAAATCAAAT---ATtctgtaccctataaatatgtacaattattatttgtcaattaaaaactcttaagctgggcacagtggctcatgcctgtaat------------------------------------------------------------cccaacactttgggaggtggagatgggaggctcttgaacccagaagttcgaggccagtttgggcaacatagtgagaccccatctctacaaacaattttaaaatatatttttaaaaaactctaatacagtagtccccctttatctgtaattttctttctatgttttcaGTAACCTGGTGGCCAACCAtgatccaaaaatattaaatagaaaa i papAnu2.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e chlSab2.chr6 46887019 10 + 50890351 I a score=3437.000000 s hg38.chr19_GL949747v2_alt 189246 5 + 729520 gttaa s panTro4.chr19 59121789 5 + 63644993 gttaa i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60056538 5 + 64156825 gttca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55081870 5 + 59248254 gttca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47184058 5 + 51301725 gttCA i papAnu2.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102768410 0 - 106955855 C e chlSab2.chr6 46887019 10 + 50890351 I a score=8220.000000 s hg38.chr19_GL949747v2_alt 189251 16 + 729520 ggaatcataagttttt s rheMac3.chr19 60056543 16 + 64156825 ggaatcgtaagttttt i rheMac3.chr19 C 0 I 782 s macFas5.chr19 55081875 16 + 59248254 ggaatcgtaagttttt i macFas5.chr19 C 0 I 23 s papAnu2.chr19 47184063 16 + 51301725 GGAATTGTAAGTTTTT i papAnu2.chr19 C 0 I 21 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102768410 0 - 106955855 C e chlSab2.chr6 46887019 10 + 50890351 I e panTro4.chr19 59121794 0 + 63644993 C a score=3305.000000 s hg38.chr19_GL949747v2_alt 189267 13 + 729520 ttttttttttttt s macFas5.chr19 55081914 13 + 59248254 ttttttttttttt i macFas5.chr19 I 23 C 0 s papAnu2.chr19 47184100 13 + 51301725 tttcttttttttt i papAnu2.chr19 I 21 I 304 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102768410 0 - 106955855 C e chlSab2.chr6 46887019 10 + 50890351 I e rheMac3.chr19 60056559 782 + 64156825 I e panTro4.chr19 59121794 0 + 63644993 C a score=250.000000 s hg38.chr19_GL949747v2_alt 189280 5 + 729520 attga s macFas5.chr19 55081927 5 + 59248254 tttga i macFas5.chr19 C 0 I 289 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102768410 0 - 106955855 C e chlSab2.chr6 46887019 10 + 50890351 I e papAnu2.chr19 47184113 304 + 51301725 I e rheMac3.chr19 60056559 782 + 64156825 I e panTro4.chr19 59121794 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949747v2_alt 189285 654 + 729520 tcattcttgggtgtttctcgcagagggggatttggcagggtcataggacaacggtggagggaaggtcagcagataaacaagtgaacaaaggtctctggttttcctaggcagaggaccctgcagccttccgcagtgtttgtgtcactgggtacttgagattagggagtggtgatgactcttaacgagcatgctgccttcaagcatctgttcaacaaagcacatcttgcaccgcccttaatccatttaaccctgagtggacacagcacatgtttcagagagcacagggttgggggtaaggtcacagatcaacaggatcccaaggcagaagaatttttcttagtacagaacaaaatgaaaagtctcccatgtctacctctttctacacagacaccgcaaccatccgatttctcaatcttttccccacctttccccgctttctattccacaaaaccgccattgtcatcatggcccgttctcaatgagctgttgggtacacctcccagacggggtggcggccgggcagaggggctcctcacttcccagtaggggcggccgggcagaggcgcccctcacctcccggatggggcggctggcctggcggggggctgacccccccacctccctcccggacggggcggctggccgggcgagggg e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102768410 0 - 106955855 C e chlSab2.chr6 46887019 10 + 50890351 I e papAnu2.chr19 47184113 304 + 51301725 I e macFas5.chr19 55081932 289 + 59248254 I e rheMac3.chr19 60056559 782 + 64156825 I e panTro4.chr19 59121794 0 + 63644993 C a score=17980.000000 s hg38.chr19_GL949747v2_alt 189939 24 + 729520 GGAATCATAAGTTTTTAACAAATC s panTro4.chr19 59121794 24 + 63644993 ggaatcataagttttTgacaaatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000163 24 + 60714840 ggaatcgtaagtttttaaCAAATC i ponAbe2.chr19 I 1191 C 0 s nomLeu3.chr10 102768410 24 - 106955855 ggaatcataagtttttaaCAAATC i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45470540 22 + 49145316 GGAATCAT--GTTTTTAACAAAAC i calJac3.chr22 I 1844 I 2 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e chlSab2.chr6 46887019 10 + 50890351 I e papAnu2.chr19 47184113 304 + 51301725 I e macFas5.chr19 55081932 289 + 59248254 I e rheMac3.chr19 60056559 782 + 64156825 I a score=576319.000000 s hg38.chr19_GL949747v2_alt 189963 407 + 729520 AAAA-------TATTTCTAAAAA-CCTAGAGTAGGCAGGAAAGG---GGAAACAACACACAGCAGAGGAGA----CAAACAAAAAGGCACACCTGAACAcagtcatgcaccgcataacgatgtttcgctccactacacatttcatatgtgatggtatagcctatgtatgtagtaggttataccacgtaggtttg------tgtaagtagact----ctatgatgttcacacgacgg----tgaattttttttt-ttcttttt--tttgagatggag-tctcattc-tgtctcccaggctggagtgaaatggcacgattttggctcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcttcccaagtagctgggattacaggcatgcaccacgatgcccggctaatttttgtatttttagtagagaca s panTro4.chr19 59121818 413 + 63644993 aaaactaaaaatatttctaaaaaacctagaatacgcaggaaagg---ggaaacaacacacagcagaggaga----caaacaaaaaGGCACACCTGAACAcagtcatgcaccgcataacgatgtttcgctccactacacatttcatatgtgatggtatagcctatgtatgcagtaggttataccacgtaggtttg------tgtaagtagact----ctatgatgtttacacgacgg----tgaattttttttt---cttttt--tttgagatggag-tctcattc-tgtctcccaggctggagtgaaatggcacgattttggctcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcttcccaagtagctgggattacaggcatgcaccacgatgcccggctaatttttgtatttttagtagagaca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000187 411 + 60714840 AAAA--TAAAATATTTCTAAAAAACCTAGAGTAGGCAGGAAAGG---GGAAACAACACACAACAGAGGAG--------ACAAAAAGGCACACCTGAACAcagtcatgtgccacataatgatgtttcggtacactacacatttcatatgtgatggtatagcctatgtatgtagtaggttataccacgtaggtttg------tgtaagtacact----gtatgatgttcacacaatgg----tgagttgtttttt-ttttttttaatttgagatggag-tctcattc-tgtttcccaggctggagtgaaatggcatgattttggctcactgcaacctccacctcccaggttcaagcgattctcctgcctcagcttcccaagtagctgggactacaggcgcgtgccacgatggccggctaatttttgtatttttactagagaca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102768434 413 - 106955855 AAAA--CAAAATATTTCTAAAAACCCAAGAGTAGGCAGGAAAGGGGAGGAAACAACACACAACAGAGGAG--------ACAAAAAGGCACGCCTGAACAcagtcacgtaccgcataacggtgtttcggtccactacacactgcatatgtgatggtatagcctgtgcatgtagtaggttatagcacgtaggtttg------tgtaaatacact----ctgtgatgttcacacaatgg----tgaattttttttttttcttctt--tttgagatggag-tctcattc-tgtctcccaggctggagtgaaatggcacaattttggctcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcttcccaagtagctgggattacaggcatgcaccacgatgcccagctaatttttgtatttttagtagagaca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55082221 405 + 59248254 -------aaaatatttctaaaaaaccaagagtaggcagcaaagg---ggaaacaacaaaaaacagaggaga----cagacaaaaaGGCAAGCCTGAGCACAATCAGGTGCTGCAGAACGATGTTTCGATCCGCTACACATTGCGTATGTGATGGtacagcctatgtatgtagtaggttataccacgtaagtttgtgtaattgtaagtacact----ctatgatgttcacacaatag----tgaattttttttt-tttttttt--tttgagatggag-tctcactc-tgtctcccaggctggagtgaaatggcacgattttggctcactgcaacctccgcctcccagg---------ttctcctgcctcagcttcccaagtagctgggattacaggtgcgcaccacgatgcctggctaatttttgtatttttagtagagaca i macFas5.chr19 I 289 C 0 s papAnu2.chr19 47184417 403 + 51301725 -------aaaatatttctaaaaaaccaacagtaggcagcaaagg---ggaaacaacaaaaaacagaggaga----caaacaaaaaggcaaGCCTGAGCACAGTCAGGTGCTGCAGAACGATGTTTCGATCCGCTACACATTGCGTATGTGATGGTACAGCCTATGTATGTAGTAGGTTATACCAcataggtttgtgtaagtgtaagtacact----ctatgatgttcacacaatag----tgaa--ttttttt-tttttttt--tttgagatggag-tctcactc-tgtctcccaggctggagtgaaatggcacgattttggctcactgcaacctccgcctcccagg---------ttctcctgcctcagcttcccaagtagctgggattacaggtgcgcaccacgatgcctggctaatttttgtatttttagtagagaca i papAnu2.chr19 I 304 C 0 s calJac3.chr22 45470564 406 + 49145316 -------AAAACATTTCTAAAAAACTAAGAGTAAGCAGGAAGTG---GGAATCAGCAAACAACAGAGGAGAGAGGCAAACAAAAAGGCAAGCCTGA-TGCAGTCACGTGCTGCGTAACGGCCTTGCAGTCCGCTACACGTCGCG--TGTGATGACGTAG-CGATGCGCGGACtaggttatatcctgtaggttt-------tgcaagtacgctcgcactatgaggttcgcacagtggtttttgtttttgttttt-gtttttgt--tttgagacagagttttcgctcttgttgcctagac----atgcaatggcatgatctcggctcaatacaacctctacctcccgggttcaa-------tcctgcctccgcttcctgagtagttgggattacaggcatgtgccatgatgcccagctaatttttgtatttttaataaagaca i calJac3.chr22 I 2 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e chlSab2.chr6 46887019 10 + 50890351 I e rheMac3.chr19 60056559 782 + 64156825 I a score=139685.000000 s hg38.chr19_GL949747v2_alt 190370 58 + 729520 gggtttcaccatgttgagcaggctggtctcgaattcccgacctctggtgatccaccca s panTro4.chr19 59122231 58 + 63644993 gggtttcaccatgttgagcaggctggtctcgaattcccgacctctggtgatccaccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000598 58 + 60714840 gggtttcaccatgttgagcaggctggtatcgaattcccgacctctggtgatccaccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102768847 58 - 106955855 gggtttcaccatgttgagcaggctggtctcgaattcccaacctctggtgatccaccca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55082626 58 + 59248254 gggtttcaccatgttgagcaggctggtctcgacctcctgacctctggtgatccaccca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47184820 58 + 51301725 gggtttcaccatgttgagcaggctggtctcgaactcctgacctctggtgatccaccca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887029 58 + 50890351 gggtttcaccatgttgaacaggctggtctcgaactcctgacctctggtgatccaccca i chlSab2.chr6 I 10 C 0 s calJac3.chr22 45470970 58 + 49145316 gggtttcaccatgttggccaggctggtcctgaactcctgacctctggtgatttgcccg i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e rheMac3.chr19 60056559 782 + 64156825 I a score=447156.000000 s hg38.chr19_GL949747v2_alt 190428 173 + 729520 tcttggcctcccaaagttctgggattacaggcatgagccaccacgcct------ggccaaaattttttaatgatggctttctcagaacatatccctgtcattaagtgacatacggttgTAATGTCATCAGTGATTACATTAAATATAAGTGATCAAAAAGAGATTACAAGATTGGAAtt s panTro4.chr19 59122289 173 + 63644993 tcttggcctcctaaagttctgggattacaggcgtgagccaccacgcct------ggccgaaattttttaatgatggttttctcagaacatatccctgtcattaagtgacatacgattgTAATGTCATCAGTGATTACATTAAATATAAGTGATCAAAAAGAGATTACAAGATTGGAAtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000656 168 + 60714840 tcttggcctcccaaagttctggg-----aggcatgagccaccacgccc------ggccaaaattttttaatgatggatttctcagaacatatccctgtcattaagtgacatacaattgTAATGTCATCAGTGATTACATTAAATATAAGTGATCAAAAAGAGATTACAAGATTGGAttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102768905 173 - 106955855 tcttggcctcccaaagttctgggattacaggcatgagccaccacgccc------ggccaaaattttttaatgatggatttctcagaatatatccctgttattaagtgacatacaattgTAATGTCATCAGTGATTACATTAAATATAAGTGATCAAAAAGAGATTACAAGATTGGAttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60057341 169 + 64156825 Tcttggcctcccaaagttctgggattacaggagtgagccatcatgccc------agccaaaattttttaatgatgga-ttctcagaacatatccctgtcattcagtgacacatgattgTAATGCCATCAGTGATTACATTAAATATAAGTGATCTAAAAGAGATTACAAGATTGGA--- i rheMac3.chr19 I 782 C 0 s macFas5.chr19 55082684 169 + 59248254 tcttggcctcccaaagttctgggattacaggagtgagccatcatgccc------agccaaaattttttaatgatgga-ttctcagaacatatccctgtcattcagtgacacatgattgTAATGCCATCAGTGATTACATTAAATATAAGTGATCTAAAAGAGATTACAAGATTGGA--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47184878 169 + 51301725 tcttggcctcccaaagttctggaattacaggagtgagccatcataccc------agccaaaattttttaatgatgga-ttctcagaacatatccctgtcattCAGTGACACACAATTGTAATGCCATCAgtgattacattaaatataagtgATCTAAAAGAGATTACaagattgga--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887087 169 + 50890351 tcttggcctcccaaagttctgggattacaggagtgagccatcatgccc------agccaaaattttttaatgatgga-ttctcagaacatatccctgtcattcagtgacacatgattgTAATGCCATCAGTGATTACATTAAATATAAGTGACCTAAAAGAGATTACAAGATTGGA--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45471028 163 + 49145316 tctccgcctctcaaagtgctgggattaccggcgtgagccaccgcgcccggccatggccaacactttttaaagatggatttctcagaacatatgcccgtcattaagtgacatgaa----------cgtaagtgat----ctaaatac-agcaat-tgaaagagattacaagattggattt i calJac3.chr22 C 0 I 142 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T a score=76016.000000 s hg38.chr19_GL949747v2_alt 190601 38 + 729520 tttttttttt---gagacagagtcttgctc-tgttgcccagg s panTro4.chr19 59122462 40 + 63644993 tttttttttt-ttgagacagagtcttgctc-tgttgcccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000824 41 + 60714840 tttttttttttttgagacagagtcttgctc-tgttacccagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102769078 40 - 106955855 tttttttttt-ttgagacagagtcttgctc-tgttgcccaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60057510 39 + 64156825 --TTTTTTTT-TTGAGATGGAGTTTCGCTCTTGTTGCCCAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55082853 39 + 59248254 --tttttttt-ttgagatggagtttcgctcttgttgcccagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185047 39 + 51301725 --tttttttt-ttgagatggagttttgctcttgttgcccagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887256 38 + 50890351 ---ttttttt-ttgagatggagttttgctcttgttgcccagg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e calJac3.chr22 45471191 142 + 49145316 I a score=31453.000000 s hg38.chr19_GL949747v2_alt 190639 11 + 729520 ctgtagtgcag s panTro4.chr19 59122502 11 + 63644993 ctgtagtgtag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000865 11 + 60714840 ctgtagtgcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102769118 11 - 106955855 ctggagtgcag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60057549 11 + 64156825 CTGGAGTGCAG i rheMac3.chr19 C 0 I 2778 s macFas5.chr19 55082892 11 + 59248254 ctggagtgcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185086 11 + 51301725 ctggagtgcag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887294 11 + 50890351 ctggagtgcaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45471333 11 + 49145316 ctgcagtgcag i calJac3.chr22 I 142 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T a score=222255.000000 s hg38.chr19_GL949747v2_alt 190650 104 + 729520 tggtgtgatctcggttcactgcaaccactgcctcctgggttcaagcagttctctgcctcagcctccctagtagctgggattacaggtgcctgccaccacacctg s panTro4.chr19 59122513 104 + 63644993 tggtgtgatctcggttcactgcaacctctgcctcctgggttcaagcagttctctgcctcagcctccctagtagctgggattacaggtgcctgccaccacacctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000876 104 + 60714840 tggtgtgatcttggttcactgcaacccctgcctcccaggttcaagcaattctctgcctcagcctcccaagtagccgggattacaggcgcctgccaccacgccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102769129 104 - 106955855 tggtgtgatctcggctcactgcaacctctgcctcccgggttcaagcagttctctgcgtcagcctccctagtagctgggattacaggcgtctgccaccaggcctg i nomLeu3.chr10 C 0 I 1977 s macFas5.chr19 55082903 104 + 59248254 tggtgtgatcttggctcactacagcctctgcctcccgggttcaagcaattctctgcctcagcatcctgagtagctgggattacaggtgccggccaccacacccg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185097 104 + 51301725 tggtatgatcttggctcactacaacctctgcctcccgggttcaagcaattgtctgcctcagcatcccgagtagctgggattacaggcgcctgccaccacaccgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887305 104 + 50890351 tggtatgatcttggctcactacaacctctgcctcctgggttcaagcaattgtctgcctcagcatcccgagtagctgggattacaggcgcctgccaccacaccgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45471344 101 + 49145316 tggcgccatctcggctcaccgcaacctctgtctcc-ggggtcaagcaattctctgcctc--cctccccagtagctgggattatagacatctgccaccacacctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e rheMac3.chr19 60057560 2778 + 64156825 I a score=171433.000000 s hg38.chr19_GL949747v2_alt 190754 73 + 729520 gccagtttttgtatttttagtagagatggggtttcaccatcttggccaggctagtcttgaactcctgaccttg s panTro4.chr19 59122617 73 + 63644993 gccaatttttgtatttttagtagagacggggtttcaccatcttggccaggctagtcttgaactcctgaccttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000980 73 + 60714840 gccaatttttgtatttttagtagagatggggtttcaccatcttggccaggctagtcttgaactcctgaccttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771210 73 - 106955855 gccaatttttgtatttttagtagagacggggtttcagcattttggccaggctagtcttgaactccttgacttg i nomLeu3.chr10 I 1977 C 0 s macFas5.chr19 55083007 73 + 59248254 gctaatttttgtatttttagtagggacggggtttcaccatcttggccagactagtcttgaactcctgaccttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185201 73 + 51301725 gctaatttttgtatttttagtagagacggggtttcaccatcctggccagactagtcttgaactcctgaccttg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887409 73 + 50890351 gctaatttttgtatttttagtagagacggggtttcaccatcttggccagactagtcctgaactcctgaccttg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45471445 73 + 49145316 gctaatttctgtatttttagtagagacagggtttcaccatcttgggcaggctggtcttgcactcctgacctca i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e rheMac3.chr19 60057560 2778 + 64156825 I a score=847624.000000 s hg38.chr19_GL949747v2_alt 190827 292 + 729520 tgatccacccgccttggcctcccaaagtgctgggattacaggcatgaacccccgcgcctggccTGTTGTTTATATTTTATCACATTAAAAAAGCAGAAGGATGAAAAATGTATTATGCAAACACTAATCAACAGATAATTTCACTGGCTTGTTAGttgttttg------tttttttgagacagggtctc------gtccaggctgaagtgctgtggtgcgatctcggctcattgcagcctcgacctcctgtaccca-agtgatcctcccacctcagcctctc-aagta-gctgggactacaggtgtg s panTro4.chr19 59122690 292 + 63644993 tgatccacccgccttggcctcccaaagtgctgggattacaggcatgagcccccgcgcctggccTGTTGTTTATATTTTATCACATTAAAAAAGCAGAAGGATGAAAAATGTATTATGCAAACACTAATCAACAGATAATTTCACTGGCTTGTTAGttgttttg------ttgttttgagacagggtctc------atccaggctgaagtgctgtggtgcgatctcggctcattgcagcctcgacctcctgtaccca-agtgatcctcccacctcagcctctc-aagta-gctgggactacaggtgtg i panTro4.chr19 C 0 I 10 s ponAbe2.chr19 56001053 298 + 60714840 tgatccacccgcctcggcctcccaaagtgctgggattacaggcatgagtccccgtgcctggccTGTTGTTTATATTTTATCACATTAAAAAACCAGAAGGATGAAAAATGTATTATGCAAACACTAATCAACAGATAATTTCACTGGCTTGTTAGttgttttg------tttttttgagacagggtctcactgttgtccaggctgaagtgctgtggtgcggtcttggctcactgcagcctcgacctcctgtaccca-agtgatcctcccatctcagcctctc-aagta-gctgtgactacaggtgtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771283 298 - 106955855 tgatctacccgcctcagcctaccaaagtgctgggattacaggcatgagcccctgcgcctggccTGTTGTTTATATTTTATAACATTAAAAAAGCAGAAGGATGAAAAATGTATTATGCAAACACTAATCAACAGATAATTTCACTGTCTTGTTAGttgttttg------tttttttgagacagtgtctcactgttgtccaggctgaagtgctgtggtgtgatcttggctcaccgcagcctcaacctcctgtaccca-agtgatcctcccacctcagcctctc-aagta-gctgggactacaggtgtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060338 305 + 64156825 tgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcccggccTGTTGTTTATATTTTATCACATTAAAAAAGCAGACGGATGAAAAATGTATTATGCAAACACTAATCAACAGGTAATTTCACTGGCCttttaattgttttggtttattttttttgagacagggtctcactgttgctcaggctgaagtgctgaggtaccatcttggctcactgcagcctcgacctcctgtgcccaaagtgattctcccgcctcagcctctc-aagta-gctggcactacaggtgtg i rheMac3.chr19 I 2778 C 0 s macFas5.chr19 55083080 305 + 59248254 tgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggccTGTTGTTTATATTTTATCACATTAAAAAAGCAGACGGATGAAAAATGTATTATGCAAACACTAATCAACAGGTAATTTCACTGGCCttttaattgttttggtttattttttttgagacagggtctcactgttgctcaggctgaagtgctgaggtaccatcttggctcactgcagcctcgacctcctgtgcccaaagtgattctcccgcctcagcctctc-aagta-gctggcactacaggtgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185274 305 + 51301725 tgatccaccctcctcagcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggcctgttgtttatattttatcacattaAAAAAGCAGACGGATGAAAAATGTATTATGCAAACACTAATCAACAGGTAATTTCACTGGCCTTTTaattgttttggtttattttttttgagacagggtctcactgttgctcaggctgaagtgctgtggtaccatcttggctcactgcagcctcgacctcctgtgcccaaagtgattctcccgcctcagcctctc-aagta-gctggcactacaggtgtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887482 305 + 50890351 tgatccaccctcctcagcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggccTGTTGTTTATATTTTATCACATTAAAAAAGCAGACGGATGAAAAATGTATTATGCAAACACTAATCAACAGGTAATTTCACTGGCCttttaattgttttggtttattttttttgagacagggtctcactgttgctcaggctgaagtgctgtggtaccatcttggctcactgcagccttgacctcctgtgcccacagtgattctcccgcctcagcctctc-aagta-gctgggactacaggcgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45471518 297 + 49145316 tgatccgcctgccttggcctcccaaagtgctgggattgcaggtgtg-gccaccacccctggcattttatttata-tTTATCACATTAAAAAAACCGAAGGTTGAAAAATGTATTATGCAAACACGAATCAACAGATAATTTCACTGGAtttttagtt-ttctg------atttttttagacagggtctcactgttgcccaggctggagagctgtggtgtgatcttggctcactgcagcctcgacctcctgtgccca-agtgatcctcccacctcagcctccctaagtgcgctggggctacaggtgtg i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T a score=49923.000000 s hg38.chr19_GL949747v2_alt 191119 22 + 729520 tgccaccacgccggactggttt s ponAbe2.chr19 56001351 22 + 60714840 tgccaccgtgccagactggttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771581 22 - 106955855 tgccaccacgccggactggttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060643 22 + 64156825 tgccgccatgccggactagttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55083385 22 + 59248254 tgccgccatgccggactagttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185579 22 + 51301725 tgccgccatgccggactagttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887787 22 + 50890351 tgccgccatgccggactagttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45471815 22 + 49145316 tgccaccatgcctgactagctt i calJac3.chr22 C 0 I 39969 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e panTro4.chr19 59122982 10 + 63644993 I a score=125832.000000 s hg38.chr19_GL949747v2_alt 191141 66 + 729520 tattttttgtagagatggggcctcacaatgctgatctgactga-ctcgaactcctgagctcaagcta s ponAbe2.chr19 56001373 66 + 60714840 tattttttgtagagatggggtctcactattctgctccgactga-cttgaactcctgagctcaagcca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771603 66 - 106955855 tattttttgtagagatggggtctcactatgctgctccgactga-ctcgaactcctgagctcaagcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060665 66 + 64156825 tattttttgtagagatggggtctcactatgctgttcagactga-ctcgaactaccgagctcgagcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55083407 66 + 59248254 tattttttgtagagatggggtctcactatgctgttcagactga-ctcgaactcccgagctcgagcca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185601 65 + 51301725 ta-tttttgtagagatggggtctcactatgctgttcAGACTGA-CTTGAACTGCCGAGCGCGAGCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887809 66 + 50890351 tattttttgtggagatggggtctcactatgctgttcagactga-ctcgaactcccgagctcgagcca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45511806 65 + 49145316 tatttttagtagagacagggtttcaccatcttgggcaggctggtcttgcactcctgacctcatga-- i calJac3.chr22 I 39969 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e panTro4.chr19 59122982 10 + 63644993 I a score=164320.000000 s hg38.chr19_GL949747v2_alt 191207 59 + 729520 tcctccccacttgccctcccaaagtattgggattacaggtgtgagccactgcacctggT s panTro4.chr19 59122992 59 + 63644993 tcctccccacttgccctcccaaagtattgggattacaggtgtgagccactgcacctggT i panTro4.chr19 I 10 C 0 s ponAbe2.chr19 56001439 59 + 60714840 tcctccccacttgccctcccaaagtattgggattacaggcatgagccactgcacctggT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771669 59 - 106955855 tcctccccacttgccctcccaaagtactgggattacaggcgtgagccactgtacctggT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060731 59 + 64156825 tcctccccgcttgccctcccaaagtattgggattacagatgtgagccactgcacctggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55083473 59 + 59248254 tcctccccacttaccctcccaaagtactgggattacagacgtgagccactgcacctggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185666 59 + 51301725 CCCTCCCCACTGaccctcccaaagtattgggattacagacgtgagccactgcacctggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887875 59 + 50890351 ccctccccacttaccctcccaaagtattgggattacagacgtgagccactgcacctggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45511871 57 + 49145316 tccgcctgccttggcctcccaaagtgctgggattgcaggtgtg-gccaccacccctgg- i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T a score=7890.000000 s hg38.chr19_GL949747v2_alt 191266 9 + 729520 TATGCTTCT s panTro4.chr19 59123051 9 + 63644993 TATGCTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56001498 9 + 60714840 TATGCttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771728 9 - 106955855 TATGCTTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060790 9 + 64156825 TATGCTTCT i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45511928 5 + 49145316 ----cattt i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e chlSab2.chr6 46887934 0 + 50890351 C e papAnu2.chr19 47185725 0 + 51301725 C e macFas5.chr19 55083532 0 + 59248254 C a score=61277.000000 s hg38.chr19_GL949747v2_alt 191275 121 + 729520 --TTTTTAtt------------------------------------------------------------ttttttct---ttctttttttttt--tttttcgagacggaatctcactctgtcgcccaggctggagtgcagtggtgcgatctcagctcactgcaagctctgcctcccgggctcatgcc s panTro4.chr19 59123060 121 + 63644993 --TTTTTAtt------------------------------------------------------------atttttct---ttctttctttttt--ttttccgagacggaatctcactctgtcgcccaggctggagtgcagtggtgcgatctcagctcactgcaagctctgcctcccgggctcacacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56001507 112 + 60714840 --tttttatt-------------------------------------------------------------tttttct---ttctttttttt----------gagatggaatctcactctgttgcccaggccggagtccagtggtgcgatcttggctcactgcaagctccgcctcccgggttcacacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771737 128 - 106955855 --TTTTTATTTTTTtc-----------------------------------------------------tttctttct---ttctttttttttt--ttttttgagacagaatcacactctgccacccaggctggagtgcagtggcgtgatctcagctcactgcaagctctgcctcccgggctcacgcc i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45511933 186 + 49145316 tatttatatTTATCACATTAAAAAAACCGAAGGTTGAAAAATGTATTATGCAAACACGAATCAACAGATAATTTCACTGGAtttttagttttctgatttttttagacagggtctca--ctgttgcccaggctggagagctgtggtgtgatcttggctcactgcagcctcgacctcctgtgcccaagtg i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 5795 + 122678785 T e chlSab2.chr6 46887934 0 + 50890351 C e papAnu2.chr19 47185725 0 + 51301725 C e macFas5.chr19 55083532 0 + 59248254 C e rheMac3.chr19 60060799 0 + 64156825 C a score=150522.000000 s hg38.chr19_GL949747v2_alt 191396 200 + 729520 attctcctgcctcagcctcctgagtagctgggactataggcactcgccaccacgcccggctaatttttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcc-------------------------tgacctcatg--atccgcccgcat---cagcctcccaaagtgctgagattataggcgtgagccaccgcgcccggccTATT s panTro4.chr19 59123181 200 + 63644993 attctcctgcctcaacttcctgagtagctgggactataggcacccgccaccacgcccggctaatttttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcc-------------------------tgacctcgtg--atccgcccgcct---cggcctcccaaagtgctgagattataggcgtgagccaccgcgcccggccTATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56001619 200 + 60714840 attctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccgcgcctggctaatttttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtgtcgatctcc-------------------------cgacctcatg--atccgcccacct---cggcctcccaaagtgctgagattacaggcgtgagccaccgcgcccggccTGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771865 200 - 106955855 attctcctgcctcagcctcccgagtagctgggactataggtgcccgccaccacgcccagctaatttttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcc-------------------------tgacctcatg--atccgcccgcct---cggcctcccaaagtgctgagattataggcatgagccaccgcgcccggccTATT i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45512119 191 + 49145316 atcctcccacctcagcctcccaagtcgctggggctacaggtgtgtgccaccatgcctgactagctt-----tactttctggagaggttgggtctcacgatgctgctcaggctggctgcaa-ctcc-------------------------tgagctcaagccatcctccccact---tgccctcccgaagtgttgggattacaggcgtgagccactgtacctggT----- i calJac3.chr22 C 0 C 0 s mm10.chr7 3712089 210 + 145441459 atttgcctggctctacctccttagtt-ctgagatggaaggcatgcaattccaagcttggcCTATtgatt--catttttagaaagggtctagt------gtgtt--ccaggctggcctcttactcctaggctatgtagctgaaaatgaccttgacctcttg--accctccctcctttccactcctctaaaatgctgggatttcaggtgtgttctac----cCTGGCCT--- i mm10.chr7 T 4822 C 0 e canFam3.chr1 103003719 5795 + 122678785 T e chlSab2.chr6 46887934 0 + 50890351 C e papAnu2.chr19 47185725 0 + 51301725 C e macFas5.chr19 55083532 0 + 59248254 C e rheMac3.chr19 60060799 0 + 64156825 C a score=21980.000000 s hg38.chr19_GL949747v2_alt 191596 9 + 729520 TATGCTTCT s panTro4.chr19 59123381 9 + 63644993 TATGCTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56001819 9 + 60714840 TATGCTTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772065 9 - 106955855 TATGCTTCT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55083532 9 + 59248254 TATGCTTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185725 9 + 51301725 tatgcTTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887934 9 + 50890351 TATGCTTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45512310 9 + 49145316 TACGCCTCT i calJac3.chr22 C 0 C 0 e mm10.chr7 3712299 0 + 145441459 C e canFam3.chr1 103003719 5795 + 122678785 T e rheMac3.chr19 60060799 0 + 64156825 C a score=6552.000000 s hg38.chr19_GL949747v2_alt 191605 2 + 729520 TA s panTro4.chr19 59123390 2 + 63644993 TA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56001828 2 + 60714840 TA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772074 2 - 106955855 TA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060799 2 + 64156825 TA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55083541 2 + 59248254 TA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185734 2 + 51301725 TA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887943 2 + 50890351 TA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45512319 2 + 49145316 TA i calJac3.chr22 C 0 I 57 e mm10.chr7 3712299 0 + 145441459 C e canFam3.chr1 103003719 5795 + 122678785 T a score=128964.000000 s hg38.chr19_GL949747v2_alt 191607 57 + 729520 ATTTTCCCATGTCATAAGTTCGATGTATAATATTTACATTATCATTCAGTTTAAAAC s panTro4.chr19 59123392 57 + 63644993 ATTTTCCCATGTCGTAAGTTCGATGTATAATATTTACATTATCATTCAGTTTAAAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56001830 57 + 60714840 AGTTTCCcatttcataagtttgatgtgtaatatttacattatcattcaatttaaaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772076 57 - 106955855 ATTTTCCcatttcgtaagtttgatgtgtaatatttacattatcattcagtttaaaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060801 57 + 64156825 ATTTTCCCATTTCGTAAGTTCGATGTGTAATATTGACATTATCATTGAATTTAAAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55083543 57 + 59248254 ATTTTCCCATTTCGTAAGTTCGATGTGTAATATTGACATTATCATTGAATTTAAAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185736 57 + 51301725 ATTTTCCCATTTCATAAGTTCGATGTGTAATATTGACATTATCATTGAATTTAAAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887945 57 + 50890351 ATTTTCCCATTTCATAAGTTCGATGTGTAATATTGACATTATCATTGAATTTAAAAC i chlSab2.chr6 C 0 C 0 s mm10.chr7 3712299 21 + 145441459 -------------------TTGGTGGCTAAT-----------------GTTTAAAAc i mm10.chr7 C 0 C 0 e canFam3.chr1 103003719 5795 + 122678785 T e calJac3.chr22 45512321 57 + 49145316 I a score=401630.000000 s hg38.chr19_GL949747v2_alt 191664 158 + 729520 ATTCACT--------------Gttt-ttttttttagagacaaggtctcgctctgtcacacaggctggagtgcagtggcacagtcatagctcactgcagcctcagcagccttaacttcttgtgttcaaggaatcctccccactcagcctcctgagtaccacacccg-----------------gcctttac s panTro4.chr19 59123449 157 + 63644993 ATTCACt---------------ctt-ttttttttagagacaagttctcgctctgtcacacaggctggagtgcagtggcacagtcatagctcactgcagcctcagcagccttaacttcttatgttcaaggaatcctccccactcagcctcctgagtaCCACACCCG-----------------GCCTTTAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56001887 170 + 60714840 attCACTCACtcttttttttttttt-ttttttttagagacaaggtcttgctctgtcacacaggctggagtgcagtggcacagtc--agctcactgcagcctcagcagccttaacttcttgtgttcaaggaatcctccccactcagcctcccgagtaCCACACCCG-----------------GCCTTTAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772133 159 - 106955855 attCACT-------------CAtct-ttttttttagagacaaggtctcgctctgtcccataggctggagtgcagtggcacagtcatagctcactgcagcctcagcagccttaacttcttgtgctcaaggaatcctccctactcagcctcctgagtaCCACACCCG-----------------GCCTTTAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060858 151 + 64156825 ATTCACT-------------CACtc-tttttttt--------ggtctccctctgtcacacaggctggagtgcagtggcacagtcatagctcactgcagcctcggcagcctgaacctcttgtgttcaaggaaacctcccgactcggcctcccgagtaCCACACCTG-----------------GCCTTTAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55083600 151 + 59248254 ATTCACT-------------CACtc-tttttttt--------ggtctccctctgtcacacaggctggagtgcagtggcacagtcatagctcactgcagcctcggcagcctgaacctcttgtgttcaaggaatcctcccgactcagcttcccgagtaCCACACCTG-----------------GCCTTTAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185793 152 + 51301725 ATtcact-------------cactcttttttttt--------tgtctccctctgtcacacaggctggagtgcagtggcacagtcatagctcactgcagcctcggcagCCTGAACCTCTTgtgttcaaggaatcctcccgactcagcctcccgagtgccacacctg-----------------gcctttac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46888002 152 + 50890351 ATTCACT-------------CACtcttttttttt--------tgtctccctctgtcacacaggctggagtgcagtggcacagtcatagctcactgcagcctcggcagcctgaacctcttgtgttcaaggaatcctcccgactcagcctcccgagtGCCACACCTG-----------------GCCTTTAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45512378 156 + 49145316 ATTCACt----------------ct-tttttttaagagacaaggtctcgatctatcacacaggctggagtgcagcggcagagtcatggctcactgcagcctcagcatccttaacctcttgggttcaaggcattctcccgactcagcctcccaagtGCCACAACTG-----------------GCCTTTAT i calJac3.chr22 I 57 C 0 s mm10.chr7 3712320 118 + 145441459 ------------------------------------------------actctgtagcccaggttggcatgaaattcactag--atgactcaccatggccaca----------------------aaacaaattcccctcgtcagcctcctgtgggttggaattgtggggctgtgcaacagtgcctgTAA i mm10.chr7 C 0 C 0 e canFam3.chr1 103003719 5795 + 122678785 T a score=16127.000000 s hg38.chr19_GL949747v2_alt 191822 5 + 729520 gtctg s panTro4.chr19 59123606 5 + 63644993 GTCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002057 5 + 60714840 GTCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772292 5 - 106955855 GTCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60061009 5 + 64156825 GTCGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55083751 5 + 59248254 GTCGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185945 5 + 51301725 gtctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46888154 5 + 50890351 GTCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45512534 5 + 49145316 GTCTG i calJac3.chr22 C 0 T 35775 s mm10.chr7 3712438 5 + 145441459 ATTTT i mm10.chr7 C 0 I 56 s canFam3.chr1 19700859 5 - 122678785 gtctc i canFam3.chr1 T 23254 C 0 a score=192959.000000 s hg38.chr19_GL949747v2_alt 191827 75 + 729520 tttttgttttttgtTTTTTTGTTATT-AACTCA-TTGATTGTTGAGAAGTCTGTTGCTTT-ATTTCCAAAATGGGACG s panTro4.chr19 59123611 72 + 63644993 TTTTTTTTTTTT---TTTTTGTTATT-AACTCA-TTGATTGTTGAGAAGTCTGTTGCTTT-ATTTCCAAAATGGGACG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002062 73 + 60714840 TGTTTTTTTTTT--ttttttcttatt-aactca-ttgattattgagaagtctgttgcttt-atttccaaaatgcgacg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772297 73 - 106955855 TGTGTTTTTTTT--TTTTTTCTTATT-AACTCA-GTGATTATTGAGAAGTCTGTTGCTTT-ATTTCCAAAATGCGACG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60061014 68 + 64156825 -----TTTTTTT--ttttttcttatt-aactca-ttaattattgagaagtctgttgcttt-atttccaaaatgcgacg i rheMac3.chr19 C 0 I 308 s macFas5.chr19 55083756 69 + 59248254 ----TTTTTTTT--TTTTTTCTTATT-AACTCA-TTAATTATTGAGAAGTCTGTTGCTTT-ATTTCCAAAATGCGACG i macFas5.chr19 C 0 I 314 s papAnu2.chr19 47185950 73 + 51301725 tttttttttttt--ttttttcttatt-aactcA-TTGATTATTGAGAAGTCTGTTGCTTT-ATTTCCAAAATGCGACG i papAnu2.chr19 C 0 I 315 s chlSab2.chr6 46888159 68 + 50890351 -----TTTTTTT--ttttttcttatt-aactca-ttgattattgagaagtctgttgcttt-atttccaaaatgcgatg i chlSab2.chr6 C 0 C 0 s mm10.chr7 3712499 68 + 145441459 TTCCCTTCCATT--TCATTTCTCATT----TCACTTGATTATTGAGAAATCTCTAGCTTT-ATTTCCAAACTCTG--- i mm10.chr7 I 56 C 0 s canFam3.chr1 19700864 74 - 122678785 -atttccatttt--ggttttctcattaaattcc-tggattattgagaagtccactgctttaatttccatagtgtaggg i canFam3.chr1 C 0 C 0 e calJac3.chr22 45512539 35775 + 49145316 T a score=386682.000000 s hg38.chr19_GL949747v2_alt 191902 130 + 729520 ATATTAGTCATCTTTGAG-------TCAGGTGAGTCCCACAAGTTCCCAGCGTCTCCTCATGGTCTGTGTTAGGGGTCCAGGCTGACTGGGGTTCACTG----GTGTCCACTGGGGGCAGCTCCCGTGCCTTCAGCAGTCC s panTro4.chr19 59123683 130 + 63644993 ATATTAGTCATCTTTGAG-------TCAGGTGAGTCCCACAAGTTCCCAGCGTCTCCTCATGGTCTGTGTTAGGGGTCCAGGCTGGCTGGGGTTCACTG----GTGTCCACTGTGGGCAGCTCCCGTGCCTTCAGCAGTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002135 130 + 60714840 atattagtcatctttGAG-------TCAGGTGAGTCCCACAAGTTCCCATCGTCTCCTCGTGGTCTGTGTTAGGGGTCCAGGCTGACTGGGGTTCATTG----GTGTCCACTGGGGGCAGCTCCTGTGCCTTCAGCAGTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772370 128 - 106955855 ATATTAGTCATCTTTGAG-------TCAGGTGAGTCCCACAAGTTCCCAGCGTATCCTCGTGGTC--TGTTAGGGGTCCAGGCTGACTGGGGTTCATTG----GTGTCCACTGGGGGCAGTTCCCGTGCCTTCAGCAGTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60061390 130 + 64156825 atattagtcatctttGAG-------TCAGGTGAGTCCCACAAGTTCCCAGCGTCTCCTCGTGGTCTGTGTTAGGGGTCCAGGCTGACTGGGGTTCACTG----GTGTCCACTGGGGGCAGCTCTCGTGCCTTCAGCAGTCC i rheMac3.chr19 I 308 C 0 s macFas5.chr19 55084139 130 + 59248254 ATATTAGTCATCTTTGAG-------TCAGGTGAGTCCCACAAGTTCCCAGCGTCTCCTCGTGGTCTGTGTTAGGGGTCCAGGCCGACTGGGGTTCACTG----GTGTCCACTGGGGGCAGCTCCCGTGCCTTCAGCAGTCC i macFas5.chr19 I 314 C 0 s papAnu2.chr19 47186338 130 + 51301725 atattaGTCATCTTTGAG-------TCAGGTGAGTCCCACAAGTTCCCAGCGTCTCCTCGTGGTCTGTGTTAGGGGTCCAGGCTGACTGGGGTTCACTG----GTGTCCACTGGGGGCAGCTCCCGTGCCTTCAGCAGTCC i papAnu2.chr19 I 315 I 59691 s chlSab2.chr6 46888227 130 + 50890351 atattagtcatctttGAG-------TCAGGTGAGTCCCACAAGTTCCCAGTGTCTCCTCGTGGTCTGTGTTAGGGGTCCAGGCTGTCTGAGGTTCATTG----GTGTCCACTGGGGGCAGCTCCCGTGCCTTCAGCAGTCC i chlSab2.chr6 C 0 C 0 s mm10.chr7 3712567 126 + 145441459 ATGTTACTTAAAGTGCAG-------TCACGT---TTCCAAAAGTTCCCAGAGTCCCTTGGAGGTCTCTGCTAGGCATCCTGGCAGGCAGGGGGTCATTGCTCCATGTCC-TTGGGAACAGCCTCTGGAC---GAGCAGCC- i mm10.chr7 C 0 C 0 s canFam3.chr1 19700938 124 - 122678785 atattagctatctttGAGGGCAGAATTGGGTGACTTGCAAAGGGTCCCAGGAGTTACTAGTGGTCTGTGTGAGGAGTCCAGGCTGGCTGG-------TA----GCACCCACTATGGGCAGGTCCTGTGCCTTCCT------ i canFam3.chr1 C 0 C 0 e calJac3.chr22 45512539 35775 + 49145316 T a score=936995.000000 s hg38.chr19_GL949747v2_alt 192032 302 + 729520 TGAGTCTCCTTCTGCTGAGTGTGGGGTCTGCGTACCCCCC-GGGCTAGTGGATGGCCAGAGTGGCGTAGATGCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGATGGAGGAGGCTCAGTTGCCTTCCGTCTAAGGGTCAAGCTGTGCAGCTGGGCGTAGGTCACATCCTGGGAGGCTTCAGATGCAGCAGCCTGCAGCGGGGGAGAGTGAGAGGTAAGGAACGTGGTGGGGGTGGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACTCACCTCAGTGTCCATCTGCCTGTCCTCTTCCACCTG s panTro4.chr19 59123813 302 + 63644993 TGAGTCTCCTTCTGCTGAGTGTGGGGTCTGCGTGCCCCCC-GGGCTAGTGGATGGCCAGAGTGGCGTAGATGCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGATGGAGGAGGCTCAGTTGCCTTCTGTCTAAGGGTCAAGCTGTGCAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGATGCAGCAGCCTGCAGCGGGGGAGAGTGAGAGGGAAGGAACGTGGTGGGGGTCGGGGAGGCCTGGGGGTCTGGAGAGGAAAGGACTCACCTGAGTGTCCATCTGCCTGTCCTCTTCCGCCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002265 303 + 60714840 TGAGTCTCCTTCTGCTGAATGTAGGGTCTGTGTCCCCCCCTGGGCTAGTGGATGGCCAGGGTGGCGTAGACGCTGGCCTCAGCTGGAGGTTCCCGTTCCTGGGATGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTGTGCAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGATGCAGCAGCCTGCAGTGGGGGAGAGTGAGAGGGAAGGAACGTGGTGGGAGTCGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACCAGCCTAAGTGCCCATCTGCCTGTCCTCTTCTGCCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772498 302 - 106955855 TGAGTCTCCTTCTCCTGAGTGTGGGGTCTGGGTCCCCTCT-GGGCTAATGGATGGCCAGTGTGGCATAGATGCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGATGGAGGAGGCTCAGTTGCCGTCCGTCTGAGGGTCAAGCTGTGCAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGATGCAGCAGCCTGCAGTGGGGGAGAGTGAGAGGGAAGGAACGTGGTGGGGGTCGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACTCACCTCAGTGTCCATCTGCCTGTCCTCTTCTGCCTG i nomLeu3.chr10 C 0 M 1242 s rheMac3.chr19 60061520 299 + 64156825 CGAGTCTC---CTGCTGAGTGTGGGGTCTGGGTCCCCACC-GGGTTAGTGGATGGCCAGGGTGGCGTAGACGCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGTTGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTCTGCAGCTGGGCATAGGTCACATCCTGGGGGTCTTCAGATGCAGCAGCCTGCAGTGGGGGAGAGTGAGAGGGAAGGAACGTGGTGGGGGTGGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACTCACCTCAGTGTCCATCGGCCTGTCCTCTTCCGCCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55084269 299 + 59248254 CGAGTCTC---CTGCTGAGTGTGGGGTCTGGGTCCCCACC-GGGCTAGTGGATGGCCAGGGTGGCGTAGACGCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGGTGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTCTGCAGCTGGGCGTAGGTCACATCCTGGGGGTCTTCAGATGCAGCAGCCTGCAGTGGGGGAGAGTGAGAGGGAAGGAACATGGTGGGGGTGGGGGAGGGTTGGGGGCCTGGAGAGGAAAGGACCAGCCTCAGTGTCCCTCTGCCTGTCCTCTTCCGCCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47246159 302 + 51301725 TGAGTCTCCTTCTGTTGAGTGTGGGGTCTGGGTCCCCTCC-GGGTTAGTGGATGGCCAGGGTGGCGTAGACGCTGGGCTCAGCTGGAGGTTCCCTTTCCTGGGTTGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTCTGCAGCTGGGCGTAGGTCACATCCTGGGGGTCTTCAGATGCAGCAGCCTGCAgtgggggagagtgagagggaaggagcgtggtgggggtgggggaggcctgggggcctggagaggaaaggaCTCACCTCAGTGTCCATCTGCCTGTCCTCTTCCACCTG i papAnu2.chr19 I 59691 C 0 s chlSab2.chr6 46888357 301 + 50890351 TGAGTCTCCTTCTGCTGAGTGTGGGGTCTGGGTCCCCTCC-GGGTTAGTGGATGGCCAGGGTGGCGTAGACGCTGGGCTCAGCGGGAGGTTCCCCTTCCTGGGTTGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTCTGCAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGATGCAGCAGCCTGCAGTAGGGGAGAGTGAGAGGGAAGGAACGTGCT-GGGGTGGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACCAGCCTGAGTGTGCATCTGCCTGTCCTCTTCCGCCTG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3712693 247 + 145441459 ------------------------------------------------------GCCAGAGTAGCATATACACTGGGCTCCTCTGGGGCTTCCCCTGCCTGGGAGAGAGGAGATGCAGCTGCCCCCTGTCTGAGTGTCCTGCTGCACAGCTGGGCATAGGTCACATCCTGGGACTCCCCAGATTCGGCAGCCTGGAGTGGGAGAGGGTGAGAGA-AAGGTATGTGAT-TTGCTTGGGGAAACCTGCAGGTCTGTGGAGGACAGGACCCACCTGATTGTTTGCTCCTTGGCCCTCTTCTGCTTG i mm10.chr7 C 0 C 0 s canFam3.chr1 19701062 289 - 122678785 TGGGTC-------------CGTGGGGTCTGGGTCCTTCCT-GGGCTAGTGAATGGCCAGAGCAGCATACACGCTGGGCTCTGCTGGGGGCTCCCCTGACTGGGAGGGAGAGGATGCACTTGTCTTCTGTCTGAGGGTCAAGTGGTTCAGCTGAGCGTAGGTCACATCTGGGGGGGCGTCAGATGCAGCAGCCTGCAGCAGGGGAGAGTGAGAGGGGAGGTTGGTGTTGGGGTGGGGGGAAGCCAGGGTGATCAGAGAAGACAGGGCCCACCTGACTGTCCATCCACCTATCTTCCTCTGCTTG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45512539 35775 + 49145316 T a score=567557.000000 s hg38.chr19_GL949747v2_alt 192334 266 + 729520 TCTGTCCTTTGTGTCCAGGAATTCCCCAGACAGTGAGGAGGGAGGAGAGGCCATTTCTCTCCTAGGACTGGAGTGTT------TCACCGGGGCATACGTCACTGCCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAGAGACAGTGGTGGGG-------G-----GTGTCCTTGAGTCCCCCT---GACCTCCTGGAGTCAATTTTCCTCACTGTTCCCGGGGTGAT-----------------CCGATTACATCCCT---TTCCTGATGGAATCT-CAGGGACGCCCTAAGGCCGTGGAGggtct s panTro4.chr19 59124115 266 + 63644993 TGTGTCCTTTGTGTCCAGGAATTCCCCAGACAGTGGGGAGGGAGGAGAGGCCATTTCTCTCCTAGGTCTGGAGTGTT------TCACCGGGGCATACGTCACTGCCTGGGGGTCTTCATTGTGTGGGCTCTGCTGGAGAGAGACAGTGGTGGGG-------G-----GTGTCCTTGAATCCCCCT---GACCTCCTGGAGTCAATTTTCCCCACTGTTCCCCGGGTGAT-----------------CCGATTACATCCCT---TTCCTGATGGAATCT-CAGGGACGCCCTAAGGCCGTGGAGggtct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002568 266 + 60714840 TGTGTCCTTTGTGTCCAGGAATTCCTCAGACAGTGGGGAGGGAGGGGAGGCCATTTCTCTCCTAGGTCTGGAGTGTT------TCACTGGGGCATATGTCATTGCCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAGAGACAGTGGTGGGG-------G-----GTGTCCTTGAATCCCCCT---GACCTCCTGGAGTCAATTTTCCTCACTGTTCCCAGGGTGAT-----------------CTGATTACATCCCT---TTCCTGATGGAATCT-CAGGGACGCCCTAAGGCCGTGGAGggtct i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60061819 266 + 64156825 TGTGTCCTTTGTGTCCAGGAATTCCTCGGACAGTGGGGAGGGAGGGGAGGTCATTTCTCTCCTAGGTCCGGAGTGTT------TCACCCGGGCATACGTCACTGCCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAAAGACACTGGTGGGG-------G-----GTGTCCTTGAGTCCCCCT---GACCCCCTGGAGTCAATTTTCCTCACTGTTCCCAGGGTGAT-----------------CTGATTACATCCCT---TTCCTGATGGAATCT-CAGGGACGCCCTAAGGCCGTGGAGGGTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55084568 266 + 59248254 TGTGTCCTTTGTGTCCAGGAATTCCTCGGACAGTGGGGAGGGAGGGGAGGCCATTTCTCTCCTAGGTCCGGAGTGTT------TCACCCGGGCGTATGTCACTGCCTGGGGGTCTTCATCGTGTGGCCTCTGCTGGAGAAAGACACTGGTGGGG-------G-----GTGTCCTTGAGTCCCCCT---GACCCCCTGGAGTCAATTTTCTTCACTGTTCCCAGGATGAT-----------------TCGACTACATCCCT---TTCCTGATGGAATCT-CAGGGACGCCCGAAGGCCGTGGAGggtct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47246461 266 + 51301725 TGTGTCCTTTGTGTCCAGGAATTCCTCGGACAGTGCGGAGAGAGGAGAGGCCATTTCTCTCCTAGGTCCGGAGAGTT------TCACCTGGGCGTATGTCACTGTCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAAAGACACTGGTGGGG-------G-----GTGTCCTTGAGTCTCTCT---GACCCCCTGGAGTCAATTTTCTTCACTGTTCCCAGGATGAT-----------------TCGATTACATCCCT---TTCCTGATGGAATCT-CAGGGATGCCCTAAGGCCGTGGAGAGTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46888658 266 + 50890351 TGCGTCCTTTGTGTCCAGAAATTCCTCGGACAGTGGGGAGGGAGGAGAGGCCACTCCCCGCCTGAGTCTGGAGTGTT------TCACCTGGGCATGTGTCACTGCCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAGAGACACTGGTGGGG-------g-----gtgtccttgaatccccct---gaccccctggagtcaattttcttcactgttcccagggtgat-----------------ccgattaTATCTCT---TTCCTGATAGAATCT-CAGGGATGCCCTAAGGGCGTGGAGggtct i chlSab2.chr6 C 0 C 0 s mm10.chr7 3712940 250 + 145441459 TTCATATTCTGTGTTCAGTTGTTCCCTTGACATGACAGAAGGTGAGACATGTCCTGCCTTCCTGAGCCTGGAGGGTT------TCACCTGGGCATAAGTCTCTCCCTGGGGATCTTCCTCAGGTGGTGTCTGT---AGCAAGGAAGTAGTGAGGTACAGACA-----GTGTCTTCCTGTTCCCCTGGGGATCTTCTTTGGCCAGTTTCCATAGC-ATGGCTAGAGTGAC-----------------CTGTTTAGATTACTGCCTCTCTGATGGGAACT---------TCCT----------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19701351 293 - 122678785 TCTGTCCTCTGAGTCCTGTAATCCTCCTGAAAGGGAGGAAGGAGGAGTGGCCAGGACCTGCCTGGGACTTGATCATTAGTAGCTCACCTGGGCGTACATGTCTCCATGGGGTTCTTCATCCTGTGTGTTCTTCTGCAGACAGACAGTGAGGGGG-------AGGTTTgtctccttgaattcactc---catcactt-cagtcaatttgccacactgtggccagagtgatgctttcaaactttcaggcagattaggtcact---ttcctgctggactctgcagggacttcctga-gccttgaagcatgt i canFam3.chr1 C 0 C 0 e calJac3.chr22 45512539 35775 + 49145316 T e nomLeu3.chr10 102772800 1242 - 106955855 M a score=72692.000000 s hg38.chr19_GL949747v2_alt 192600 23 + 729520 ggccgctccctccctgtggttct s panTro4.chr19 59124381 23 + 63644993 ggccgctccctccctgtggttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002834 23 + 60714840 ggccgctccctccctgtggttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774042 23 - 106955855 GGCCGCTCCCTCCCTGTGGTtct i nomLeu3.chr10 M 1242 C 0 s rheMac3.chr19 60062085 23 + 64156825 GGCCGCTCCCTCCCTGTGGTTCT i rheMac3.chr19 C 0 I 43517 s macFas5.chr19 55084834 23 + 59248254 ggccgctccctccctgtggttct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47246727 23 + 51301725 GGCCGCTCCCTCCCTGTGGTTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46888924 23 + 50890351 ggccgctccctccctgcggttct i chlSab2.chr6 C 0 C 0 s mm10.chr7 3713190 21 + 145441459 GG--GTTTCCTTCTTACAGTTCA i mm10.chr7 C 0 C 0 s canFam3.chr1 19701644 22 - 122678785 -gatgttttctttctatggctct i canFam3.chr1 C 0 C 0 e calJac3.chr22 45512539 35775 + 49145316 T a score=118167.000000 s hg38.chr19_GL949747v2_alt 192623 50 + 729520 ggcctctgctcctcactctga-ccttgcccatttggctgcagcctcaca-gg s panTro4.chr19 59124404 50 + 63644993 ggcctctgctcctcactctga-ccttgcccatttggctgcagcctcacg-gg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002857 51 + 60714840 ggcccctcctcctcactctga-ccttgcccatttggctgcagcctcacgcgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774065 51 - 106955855 ggcctctcctcctcattctga-ccttgcccatttggctgcagcctcacgcgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60105625 50 + 64156825 ggcctctcctcctcactctga-ccttgcccatttggctgcagcctaatgcc- i rheMac3.chr19 I 43517 T 43560 s macFas5.chr19 55084857 50 + 59248254 ggcctctcctcctcactctga-ccttgcccatttggctgcagcctcacacg- i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47246750 50 + 51301725 GGCCTCTCCTCCTCACTCTGA-CCTTGCCCATTTGGCTGCAGCCTCACACG- i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46888947 50 + 50890351 ggcctctcctcctcactctga-ccttgcccatttggctgcagcctaatgcc- i chlSab2.chr6 C 0 I 2 s mm10.chr7 3713211 50 + 145441459 AGCTTAACCTGA-CATTCAGACCCTTGCTGTCTTGGCTCTAGCCACACAGT- i mm10.chr7 C 0 C 0 s canFam3.chr1 19701666 50 - 122678785 -ggttctattcctgacactgtttcttgcccatttgccaccagccatatgac- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45512539 35775 + 49145316 T a score=10513.000000 s hg38.chr19_GL949747v2_alt 192673 5 + 729520 ---ccttc s panTro4.chr19 59124454 5 + 63644993 ---ccttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002908 5 + 60714840 ---ccttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774116 5 - 106955855 ---ctttc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55084908 5 + 59248254 ---ccttc i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47246801 5 + 51301725 ---CCTTC i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46888999 5 + 50890351 ---ctttc i chlSab2.chr6 I 2 C 0 s mm10.chr7 3713261 5 + 145441459 ---CCATC i mm10.chr7 C 0 I 326 s canFam3.chr1 19701716 8 - 122678785 ccatgttc i canFam3.chr1 C 0 C 0 e calJac3.chr22 45512539 35775 + 49145316 T e rheMac3.chr19 60105675 43560 + 64156825 T a score=93719.000000 s hg38.chr19_GL949747v2_alt 192678 49 + 729520 ctgcaagagctcgctgctgcctgggggcctttgcacggctgtttcctct s panTro4.chr19 59124459 49 + 63644993 ctacaagagctcgctgctgcctcggggcctttgcacggctgtttcctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002913 49 + 60714840 ctgcaagagcttgctgctgcctcggggcctttgcacggctgtttcctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774121 36 - 106955855 -------------ctgctgcctcggggcctttgcacggctgtttcctct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55084913 49 + 59248254 ctgcaagagctcgctgctgcctcggggcctttgcacggctgtttcttct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47246806 49 + 51301725 CTGCAAGAGCTCGCtgctgcctcaggacctttgcacggctgtttcttct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46889004 49 + 50890351 ctgcaagagctcgctgctgcctcaggacctttgcacggctgttgcctct i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19701724 44 - 122678785 ctgaaaaaccatgttgttgcctcaggacctttgcac-----ttgctact i canFam3.chr1 C 0 C 0 e mm10.chr7 3713266 326 + 145441459 I e calJac3.chr22 45512539 35775 + 49145316 T e rheMac3.chr19 60105675 43560 + 64156825 T a score=217941.000000 s hg38.chr19_GL949747v2_alt 192727 122 + 729520 gcctgcaggggctcgtctatcagaggatcatgtgccccactctgtccaggcttctcagatgacagctgagcagacagccctccccttc-cattcagactggccccactgccccacactctctg s panTro4.chr19 59124508 122 + 63644993 gcctgcaggggctcgtccattagaggatggtgtggccccctccgtccaggcttctcagatgacagctgagcagacagccctccccttc-cattcagactggccccactgccccacactctctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002962 122 + 60714840 gcctgtagggtctcgtccattagaggatcgtgtggccccctccgtccaggcttctcagatgacagctgagcagacagccctccccttc-cattcagactggccccactgccccacactctctg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774157 122 - 106955855 gcctacaggggctcgtctattagaggatcgtgtgctcccctccgtccaggcttctcagatgacagctgagcacacagccctccccttc-cattcagactggccccactgccccacactctctg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55084962 120 + 59248254 gcctgcaggggctcgtccattagaggatcctgtggccccctccgtccaggcttctcagatgacagctgagcagacagccctcccctta-cattcagactggccccactgccccaca--ctctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47246855 123 + 51301725 gcctgcagGGGCTCGTCCATTAGAGGATCCTGTGGCCCCCTCTGTCCAGGCTTCTCAGATGACAGCTGAGCAGACAGCCCTCCCCTTACCATTCAGACTGGCCCCACTGCCCCACACTCTCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46889053 120 + 50890351 gcctgcaggggctcgtccattagaggatcctgtggccccctccgtccaagcttctcagatgacagctgagcagacagccctctcctta-cattcagactggccccactgccccaca--ctctg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3713266 326 + 145441459 I e canFam3.chr1 19701768 0 - 122678785 C e calJac3.chr22 45512539 35775 + 49145316 T e rheMac3.chr19 60105675 43560 + 64156825 T a score=499496.000000 s hg38.chr19_GL949747v2_alt 192849 271 + 729520 ccctttccctggtgtatgttcctta-cagcacgttgcactcctggacacgatgca-tttatttgcattttgtctccca-ccatgaggtgagctca-ggaggcgggggcggctttgctccctgctgtgtctgcagctcccatggggagccccatccacagtgagctccctgggaacactcgctggatgaatgaatGAAGAGGAGCCCAGGGGACGG-AGGTGGTTCATTTATTCGT-CATCCTCCTGAGGCCTGGGGA-GAGCTCTAACAACCAGACGG s panTro4.chr19 59124630 271 + 63644993 ccctttctctggtttatgttcctta-cagcacgttgcactcctggacatggtgca-tttatttgcattttgtctccca-ccatgaggtgagctca-ggaggcgggggcggctttgctccctgctgtgtctgcagctcccacagggagccccatccacagtgagctccctgggaacactcgctggatgaatgaatGAAGAGGAGCCCAGGAGACGA-AGGTGGTTCATTTATTCCT-CATCCTCCTGATGGCTGGGGA-GCGCTCTAACTACCACATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56003084 267 + 60714840 ccctttccctggtttatgttcctta-cagcacgttgcactcctggacacggcgca-tttatttgcattttgtctccca-ccacgaggtgagctca-ggaggcgggggcggctttgctccctgctgtgtctgcagctcccacggggagcccgatccacagtgagttccc-gggaacactcgctggatgaatgaatGAAGGGGAGCCTGGGGGACCA-GGGTGGTTCATTTATTCCT-CA---TCctgaggcctgcgga-gcgctctaacaaccagatga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774279 270 - 106955855 ccctttccctggtttatgttcctta-cagcacgttgcactgctggacacggtgca-tttatttgcattttgtctccca-gcacgaggtgagctca-ggaggcgggggcggctctgctccctgctgcgtctgcagctcccacggggagcccgatccacagtgagctccctgggaacactcgctggatgaatgaatGAAGGGGAGCCCAGGGGACT--GGGTGGTTCATCTATTCCT-CATCCTCctgaggcctgggga-gcgctctaacaaccagacgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55085082 268 + 59248254 ccctttccctggtttatgtttctta-cagcacgttgcactgctggacac--tgca-tttatttgcattttgtctccca-ccacgaggtgagctca-ggaggcgggggcggctctgctccctgctgtgtctgcagctcccacagggagcccgatccacagtgagctcct-gggaacactggctggatgaatgaatgaaGGGGAGCCCAGGGGACCG-GGGTGGTTCATCTATTCCT-CATCCTCctgaggcctgggga-gcgctctaacaaccagacgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47246978 267 + 51301725 CCCTTTCCCTGGTTTATGTTTCTTA-CAGCACGCTGCACTGCTGGACAC--tgca-tttatttgcattttgtttcCCA-CCATGAGGTGAGCTCC-AGAGGTAGGGGTGGCTCTGCTCCCTGCTGTGTCTGCAGCTCCCACAGGGAGCCTGATCCACAGTGAGCTCCT-GGGAACACtcgctggatgaatgaatgaa-gggagcCCAGGGGACCG-GGGTGGTTCATCTATTCCT-CATCCTCCTGAGGCCTGGGGG-GCGCTCTAACAACCAGACGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46889173 270 + 50890351 ccctttccctggtttatgtttctta-cagcacgttgcactcctgcacatggtgca-tttatttgcattttgtctccca-ccatgaggtgagctcc-ggaggcgggggtggctctgctccctgctgtgtctgcagctcccacggggagcccgatccacagtgagctcct-gggaacactcgctggatgaatgaatgaaGGGGAGCCCAGGGGAGCA-GGGTGGTTCATCTATTCCT-CATCCTCctgaggcctgggga-gcgctctaaccaccagacgg i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19701768 272 - 122678785 cccATATCTTGTTTTATATTTCTTAGCCTCACTTTGTGCTTGAGGATGC--TGCAGCTTCTTTGCATATTGTCTGACACCCACAAGGAGAGCTCACTGAGTATGGTTCAGTTTTGCTTACTGTTGAGCTTGCAAC-ACTAGGTGGGGCCTGGT-AATATTAGACTGCTCGTGCTCCTCTGCTGAGTGAATGAATGAA-GGAGGCCTAGAGACTTGTGGGTGATTCACTTCTTCATGCACCCTGTTGAGATCTGGGTATGCATCCCAACAACAAGAAG- i canFam3.chr1 C 0 C 0 e mm10.chr7 3713266 326 + 145441459 I e calJac3.chr22 45512539 35775 + 49145316 T e rheMac3.chr19 60105675 43560 + 64156825 T a score=416038.000000 s hg38.chr19_GL949747v2_alt 193120 208 + 729520 CCAAACAGAGGATGAGGAG-CAGGAAGGGGAC-----CCGGGAGGAGGCCCACGAGGTCCCAGGACAG-CAGAAGAGAGTGAGGTCACAGCAGGCGGGAGGCAGCATGCTGGACA------AGGAGG--GGTCCA-C-CGT-GACGATGCTGAGAGCCGGGGGAAG--GAGGACAGAGAAGTCC-TGCAGGATTAGATCTGGCACCAGGAGG--CCTTTGGTGCCTGGGAC s panTro4.chr19 59124901 208 + 63644993 CCAAACAGAGGCTGAGGAG-CAGGAAGGGGAC-----CCGGGAGGAGGCCCACGAGGTCCCAGGACAG-CAGGAGAGAGTGAGGTCGCAGCAGGCGGGAGGCAGCATGCTGGACA------AGGAGG--GGTCCA-C-CGT-GACGATGCTGAGAGCCGGGGGAAG--GAGGACAGAGAAGTCC-TGCAGGATTAGATCTGGCACCAGGAGG--CCTTTGGTGCCTGGGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56003351 208 + 60714840 ccaaacagaggatgaggag-caagaaggggac-----ctgggaggaggcccacgaggtcccaggacac-caggagagagtgacgtcacagcaggcgggaggcagcgtgctggaca------aggagg--ggtcca-c-cat-gacgatgctgagagccaggggagg--gaggacagagaagtcc-ttcaggattagatctgacactgggagg--cctttggtgcccgggac i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 102774549 208 - 106955855 ccaaacagaggacgaggag-caggaaggggac-----ccgggaggaggcccacgaggttccaggacag-caggagagagtgaggtcgcagcaggcgggaggcagcgtgttggaca------aggagg--ggccca-c-cgt-gacgatgctgagagccgggggaag--gaggacagagaagtcc-tgcaggattagatctggcaccaggagg--cctttggtgcccgggac i nomLeu3.chr10 C 0 I 1 s macFas5.chr19 55085350 207 + 59248254 ccaaacagaggaggaggag-caggaaggggac-----ccgggaggaggcccgcgaggtcccaggacag-caggagagagtgaggtcacagcaggcgggaggcagcgtgctggaca------aggagg--ggtcca-c-cgt-gatgatgctgagaaccgggggaa---gaggacagagaagtcc-tgcaggattagatctggcaccaggagg--cctttggtgcccgggac i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47247245 208 + 51301725 CCAAACAgaggaggaggag-cgagaaggggac-----ccaggaggaggcccgcgaggtcctgggacag-caggagagagTGAGGTCACAGCAGGCGGGAGGCAGCGTGCTGGACA------AGGAGG--GGTCCACC-CCT-GACGATGCTGAGAACCGGGGGAA---GAGGACAGAGAAGTCC-TGCAGGATTAGATCTGGCACCAGGAGG--CCTTTGGTGCCCGGGAC i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46889443 207 + 50890351 ccaaacagaggaggaggag-cgggaaggggac-----ccgggaggaggcccgcgaggtcccaggacag-caggagagagtgaggtcacagcaggcaggaggcagcgtgctggaca------aggagg--ggtcca-c-cgt-gatgatgctgagaaccgggaaag---gaggacagagaagtcc-tgcaggattagatctggcaccaggagg--cctttggtgcctgggat i chlSab2.chr6 C 0 I 1 s mm10.chr7 3713592 210 + 145441459 CCAGACACATGCTAAAGAGCCAGAAAGGGGACAGGAGCTGGAAGAA-----ACATGGTCCCAGGAAAACCAGGAGAGAGTGAGG-CATAGAACCCAGGAGGCAG-GTGCTGGGCATAGGGCGGGAGT--GGTCAG-C-TTTGGATATTGCTGAGGGCTGAGGGAGGCAGAAGAAAGAAGAGCCC-TGT---ACTAAGCTTGGCCCTAAGG------TTTAGCACTGTGGAT i mm10.chr7 I 326 I 1 s canFam3.chr1 19702040 180 - 122678785 TCAGACAGTGGATGGGTAG-CCAGACA----------TGGGGAGGAGGGCC------------------CAGGAG--------GTCACAGCGGG-ATGACCCAG-GTGCCCAAGA------AGGGAGAAGGTACA-CGTGG-GACAGAGCTGAGACAGGGTGGTGT--GAGGACAGAGAAGCATGTGTCAGATTAAGTTTGGCACCAAGAGGACCCTATGGTCCAGATG-- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45512539 35775 + 49145316 T e rheMac3.chr19 60105675 43560 + 64156825 T a score=547836.000000 s hg38.chr19_GL949747v2_alt 193328 213 + 729520 -GGGGCGGG-ATCTCACCTGACTGTCCAGCTCCACCCTGTCCTCAGACTGTGTGTCCTTCACGGCAGCATCTGCTGGGGCAGAGCAAGGGGTTCGTCTCCT-----GGTTCTCTGAGACCTCTCAGTCCTGCTGGCCCCCTGCCCTGCTCCCAGATGGGGCCACCGA-ATGCAGG------------------GAGGTCCCACAGTGTGG---GGCAAGACCATCTTCCACG--------GAGC----CCCAGA s panTro4.chr19 59125109 213 + 63644993 -GTGGCGGG-ATCTCACCTGACTGTCCAGCTCCACCTGGTCCTCAGACTGTGTGTCCTTCACGGCAGCATCTGCTGGGGCAGAGCAAGGGGTTCGTCTCTT-----GGTTCTCTGAGACCTCTCAGTCCTGCTGG-CCCCTGCCCTGCTCCCAGATGGGGCCACCAAGATGCAGG------------------GAGGTCCCACAGTGTGG---GGCGAGACCATCTTCCACG--------GAGC----CCCAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56003560 213 + 60714840 -ggggcagG-GTCTCACCTGAGTGTCCAGCTCCACTCCGTCCTCAGGCTGTGTGTCCTTCACAGCAGCATCTGCTGGGGCAGAGCAAGGGGTTTGTCTCCT-----GGTTCTCTGAGACCTCTCAGTCCTGCTGG-CCCCTGCCCTGCTCCCAGATGGGGCCACTGAGATCTAGG------------------GAGGTCCCACAGTGTGG---GGCGAGACCATCTTCCATG--------GAGC----CCTAGA i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 102774758 213 - 106955855 -agggcggG-GTCTCACCTGACTGTCCAGCTCCACCCCGTCCTCAGACTGTGTGTCCTTCATGGCAGCATCTGCTGGGGCAGAGCAAGGGGTTCGTCTCCT-----GGTTCTCTGAGACCTCTCAGTCTTGCTGG-CCCCTGCCCTGCTCCCAGATGGGGCCACTGAGATCCAGG------------------GACGTCCCACAGTGTGG---GGCAAGACCATCTTCCACG--------GAGC----CCCAGA i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 60062115 217 + 64156825 -GGGGCGGG-GTCTCACCTGACTGTCCAGCTCCACCCCGTCCTCAGGCTGTGTGTCCTTCATGGCAGCATCTGCTGGGGCAGAGCAAGGGGTTTGTCTCCTGGGAAGGATCCCTGAGAGCTCTCAGTCCTGCCGG-CCCCTGCCCAGCTCCCA-CTAGGGCCACTGAGATCCAGG------------------GAGGCCCCACAGTGGGG---GGCGAGACCATCTTCCACG--------GAGC----CCCAGA i rheMac3.chr19 T 43560 C 0 s macFas5.chr19 55085558 217 + 59248254 -ggggcggG-GTCTCACCTGACTGTCCAGCTCCACCCCGTCCTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCAGGGAAACAGCAAGGGCTTCGTCTCCTGGGAAGGATCCCTGAGAGCTCTCAGTCCTGCTGG-CCCCTGCCCAGCTCCCA-CTAGGGCCACTGAGATCCAGG------------------GAGGCCCCACAGTGGGG---GGCGAGACCATCTTCCACG--------GAGC----CCCAGA i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47247454 236 + 51301725 -GGGGCGGG-GTCTCACCTGACTGTCCAGCTCCACCCCGTCCTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCGGGGACAGAGCAAGGGGTTTGTCTCCTGGGAAGGTTCCCTGAGACCTCTGAGTCCTGCCGG-CCCCTGCCCAGCTCCCAGACAGGGCCACTGCGATGAGGGAGGGGCTGCGATGTTCCCGAGGTCCCACAGTGTGG---GGTGAGATCATCTCACCCT--------GAAC----CCCAGA i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46889651 217 + 50890351 -ggggcggG-GTCTCACCTGACTTTCCAGCTCCACCCCATCCTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCAGGGACAGAGCAAGGGGTTTGTCTCCTGGGAAGGATCCCTGAGACCTCTGAGTCCCGCTGG-CCCCTGCCCAGCTCCCA-CTAGGGCCACTGAGATCCAGG------------------GAGGTCCCACAGTGGGG---GGCGAGACCATCTTCCATG--------GAGC----CCCAGA i chlSab2.chr6 I 1 C 0 s mm10.chr7 3713803 210 + 145441459 -AGGACAGGTGCCTTACCCAGCTGTTCAGCTCCACTCCATCCTCAGTTTGCATGTCCTCCACTGAAGCATCTGTCATAGCAGAACACATAGGATGTCTCCTGACTAGAGTCTA-GGGCTGTCTCAGACCCCTAGT-TTCCTGCCTTGCTCCAGGTTGGG---ACAGAGAATCAGG------------------GAAAGCT---------G---GGACATCCCTGCTTCCATC--------AAGTGAAGTTCAGA i mm10.chr7 I 1 C 0 s canFam3.chr1 19702220 224 - 122678785 GGAGTGGGG-GTCTCACCCGATGGTCCAGCTCGACCCCTTCCTCAGGCCATGTGTCTTGCACAGCAGCATCTG-TGGAGTAGAAC--GGGGTGTGTGTCTTGGCG-GGTTCCCTGAGCTCTCTCAGGGGTGCAGA--CCCTGACCTGCTCCCAGATGAGGAGGCTGTGACCCAGG------------------G-GATCCAGGGGTGAGGTTAGGTGCTAAGATCATGCATGTGGGAATTGAGT----CCTTAC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45512539 35775 + 49145316 T a score=1035949.000000 s hg38.chr19_GL949747v2_alt 193541 358 + 729520 CCCTT--CCCA------GCCCCTCCCTGTTGCTACTGAAATTTTGGGACTCCTGTC-TCTC------------------------------------------------------------------------------------------CAGCACCCCCATTT------------------------------------GTCCCCTCT--------------------------CTTCCTCTTACAGAGGTTTTCTTCCTGGACGTCAGCAGCTGGGCTGGACCTGGAG-GAGGACATGGGAGTGT--GA-GGGGCAGTG-TATGGGCTGT-GGTGGGTGGGAGTCTG-TGGTCTTTGGGGCA-GAATTACCTCCTCAGCAGGCCCCTGTCCTTGGGCTCTGTCTCCGCAGCCCCTGCAGGACGCTGGAAATCAGTCTTTCTCTGGTCTGGGTGAAGATGGACAGAGTCTCAGCCCTGGGAACATTAGAACT-CCC-ATTCTACACATGCAACTTGAGGGAAA-GAAG s panTro4.chr19 59125322 357 + 63644993 CCCTT--CCCA------GCCCCTCCCTGTTGCTACTGAAATTTTGGGACTCCTGTC-TCTC------------------------------------------------------------------------------------------CAGCACCCCCATTT------------------------------------GTCCCCTCT--------------------------CTTCCTCTTACAGAGGTTTTCTTCCTGGACGTCAGCAGCTGGGCCGGACCTGGGG-GAGGACATGGGAGTGT--GA-GGGGCAGTG-TATGGGCTGC-AGTGGGTGGGAGTCTG-TGGTCTTT-GGGCA-GAATTACCTCCTCAGCAGGCCCCTGTCCTTGGGCTCTGTCTCCGCAGCCCCTGCAGGACGCTGGAAATCAGTCTTTCTCTGGTCTGGGTGAAGATGGACAGAGTCTCAGCCCTGGGAACATTAGAACC-CCC-ATTCTACACATGCAACTTGAGGGAGA-GAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56003773 357 + 60714840 CCCTT--CCCA------GCCCCTCCCTGTTGCTACTGAAATTTTGGGACTCCTGTC-TCTC------------------------------------------------------------------------------------------CAGCACCCCCAGTT------------------------------------GTCCCCTCT--------------------------CTTCCTCTTACAGAGCTTTTCTTCCTGGATGTCAGCAGCTGGGCTGGACCTGGAG-GAGGAAACGGGAGTGT--GA-GGGGCAGTG-TATGGGCTGC-GGTGGGTGGGAGTCTG-GGGTCTTT-GGGCA-GAATTACCTCCTCAGCAGGCCCCTGTCCTTGGGCTCTGGCTCCACAGCCGCTGCAGGACGCTGGAAATCAGTCTTTCTCTGGTCTGGGTGAAGATGGACAGAGTCTCAGCCCTGGGAACATTAGAACC-CCC-ATTCTACACATGCAACTTGAGGGAAA-GAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774971 357 - 106955855 CCCTT--CCCA------GCCCCTCCCTGTTGCTACTGAAATTTTGGGACTCCTGTC-TCTC------------------------------------------------------------------------------------------CAGCACCCCCATTT------------------------------------GTCCCCTCT--------------------------CTTCCTCTTACAGAGGTTTTCTTCCTGGACGTCAGCAGCTGGGCTGGACCTGGGG-GAGGACATGGGAGTGT--GA-GGGGCAGTG-TATGGGCTGC-GGTGGGTGGGAGTCTG-GGGTCTTT-GGGCA-GAATTACCTCCTCAGCAGGCTCCTGTCCTTGGGCTCTGGCTCTGCAGCCTCTGCAGGACGCTGGGAATCAGTCTTTCTCTGGTCTGGGTGAAGATGGACAGAGTCTCAGCCCTGGGAACATTAGAACC-CCC-ATTCTACACATGCAACTTGAGGGAAA-GAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062332 350 + 64156825 CCCTT--CCCA------GCCCCTCCCTGTTGCTACTGAAATTTTGGGTCTCCC--------------------------------------------------------------------------------------------------CAGCACCCCCATTT------------------------------------GTCCCTTCT--------------------------CTTTCTCTTACAGAGGTTTTCTTCCTGGATGTCAGCAGCTGCGCTGGACCTGGGG-GAGGACACAGGAGTGT--GA-GGGGCAGTC-TATGGGCTGT-GGCGGGTGGGAGTCTG-GGGTCTTC-AGGCA-GAATTACCTCCTCAGCAGGCCCCTGTCCTTGGGCTCTGGCTCTGCAGCCCCTGCAGGATGCTGGAAATCAGTCTTTCTCTGGTCTGGGTGAAGATGGACAGAGTCTGAGCCCTGGGAACATTAGAACC-CCC-ATTCTACACAGGCAACTTGAGGGGAA-GAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55085775 350 + 59248254 CCCTT--CCCA------GCCCCTCCCTGTTGCTACTGAAATTTTGGGTCTCCC--------------------------------------------------------------------------------------------------CAGCACCCCCATTT------------------------------------GTCCCTTCT--------------------------CTTTCTCTTACAGAGGTTTTCTTCCTGGACGTCAGCAGCTGCGCTGGACCTGGGT-GAGGACACGGGAGTGT--GA-GGGGCAGTA-TATGGGCTGT-TTCGGGTGGGAGTCTG-GGGTCTTC-AGGCA-GAATTACCTCCTCAGCAGGCCCCTGTCCTTGGGCTCTGGCTCCGCAGCCCCTGCAGGACGCTGGAAATCAGTCTTTCTCTGGTCTGGGTGAAGATGGACAGAGTCTCAGCCCTGGGAACATTAGAACC-CCC-ATTCTACACATGCAACTTGAGGGGAA-GAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47247690 412 + 51301725 CCCTT--TCCAGCCTGTGCCTTTCCCCATTGCTACAGAAACTTTGGGGCCCCCATc-tcct---------cctggctgg-----------------------------------------------------------------------tcgcctcccccatctcctcctggctggtcgcctcccccatcctcctggctggtcccctctt------------------------cctgTCACTCACAGAGGTTTTCTTCCTGGGTGTCGGCAGCTGGGCTGGACCTGGGG-GAGGA-AAGGGAGCTT--TA-GGGGCAGTG-TACggggggg-gCCCAGTGGGAGTCTG-GCGTCTTC-GGGCA-GAATTACCTCCTCTGAAGGCCTCTGTCTCTGGGCTCTGGCTCCACAGCCCCTGCAGGATGTTGGAAATCAGCCTTTCTCTGGGCTGGGGGAAGAAGGACAGAGCCTCAGCCCTGGGAACATCGGAGcc-ccctgccccccACACACAGCTGGAAGGTAAGGAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46889868 350 + 50890351 CCCTT--CCCA------GCCCCTCCCTGTTGCTACTGAAATTTTGGGTCTCCC--------------------------------------------------------------------------------------------------CAGCACCCCCATTT------------------------------------GTCCCTTGT--------------------------CTTTCTCTTACAGAGATTTTCTTCCTGGACGTCAGCAGCTGTGCTGGCCCTGGGG-AAGGACACGGGAGTGT--GA-GGGGCAGTA-TATGGGCTGT-GGTGGGTGGGAGTCTG-GGGTCTTC-AGGCA-GAATTACCTCCTCAGCAGGCCCCTGTCCTTGGACTCTGGCTCCGCAGCCCCTGCAGGACGCTGGAAATCAGTCTTCCTCTGGTCTGGGTGAAGATGGACAGAGTCTCAGCCCTGGGAACATTAGAACC-CCC-ATTCTACACATGCAACTTGAGGGGAA-AAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45476764 475 + 49145316 CCCTT--CCCA------GCCCCTCCCTCTTGCTAATGAAATGTTGGGActcctgtc-ttctctccagccccccatttggccctcccatccccccagccccccatttgtccctcccgtcccttcagcacccccatttgtccctcccgtcccccagcacccccattt------------------------------------gtccctcctttccccccagccccccatttgtccctcttcctctcACAGAGGTTTTCTTCCGGGACATCAGCAGCTGGGCTGGACCTGG---GAGGACACAGGAGTGTGAGA-GGGACAGGG-TACGGGTGGTGGGTAGGTGGGAGTCTG-GGGTCTTC-GGGCA-GAATTACCTCCTCTGCAGGCCCTTGTCCTTGGGCTCTGGCTCCACAGCCCCAGTAGGATGGTGGAAATCAGCCTCTCTCTGGTCTGGATGAAGACAGACAGAGTCTCAGCCCTGGGAACATTAGAACCACCC-ATCCTGCACATGCAACTTGAGGGAAA-GCAG i calJac3.chr22 T 35775 C 0 s mm10.chr7 3714013 340 + 145441459 TCCGT--ACAA---TGAAACCCTCTCCAACACCCCGGTAATTCTGAAGCCCCAGCCATCTC------------------------------------------------------------------------------------------C--CCCCCCCAGGA------------------------------------CTCC-------------------------------CTTTCTCTCACATAGGCTTTCTTCCTGGGTGGCAGCAGCTGGGTTGGGCCTGGAG---GGACAAGGAGACGT--CACTTAGCAGTGAGATGTGTCAT--ACGGGCAGGGGTCTA--GGTCTCT-GT----GATTTACCTCTTCTGGAGTTCTCCTTTCCTGGTTATGGGCTCTTCAGCTCCTGAAGAAAGTTGCAAGTCTTTCTCTTTCTGGACTG--CAAGGGAGG--GGAGTCTCAG--CTAGGAGGATGGGAAGC-CCCTCCCCTGGGCATG----TTCAGGGAAG-GAAG i mm10.chr7 C 0 C 0 s canFam3.chr1 19702444 290 - 122678785 CCCTTACCCCA------AACCTTC-------------------------------------------------------------------------------------------------------------------------------CAGCCCACCCCCAA------------------------------------GGCAGCCC---------------------------CTTCCTCTCACAGAGGGTTTCCTCCTGGGTGGTAGCAGCTGGGCTGGAGCTGGGGAGGAGACATGG---TGT--CA-GAGGGCATG-CAGGGGGTG--GGTGGGTGGGAGTCTGGGGGTCTGT-GGGCAGGAGTTACCTGTCCTGCAGGCCTCTGTCCTTGGGCTCTGGGTCTGCATCCCCTGCAGGACATTAGGAATCAGCATCCCTCTGGAATGGG-----------------------------AGGTTACAACC-TCC-TGCCTCCATGTGATACC--AGGGAAA-GGAG i canFam3.chr1 C 0 I 125 a score=11595.000000 s hg38.chr19_GL949747v2_alt 193899 4 + 729520 GAAA-------- s panTro4.chr19 59125679 4 + 63644993 GAAA-------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004130 4 + 60714840 GAAA-------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102775328 4 - 106955855 GAAA-------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062682 4 + 64156825 GAAA-------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55086125 4 + 59248254 GAAA-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47248102 4 + 51301725 GAAA-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46890218 4 + 50890351 GAAA-------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45477239 4 + 49145316 GAAA-------- i calJac3.chr22 C 0 C 0 s mm10.chr7 3714353 4 + 145441459 GAAG-------- i mm10.chr7 C 0 I 21 s canFam3.chr1 102997924 11 + 122678785 -AAAGGGTTCTA i canFam3.chr1 T 5795 C 0 a score=101030.000000 s hg38.chr19_GL949747v2_alt 193903 41 + 729520 ACTAAAAATATTCCTGCATGGATGTTCCAAATATTTTATGA s panTro4.chr19 59125683 39 + 63644993 ACTAAAAATATTCCTGCATGGATGTTCCAAATATTTCAT-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004134 39 + 60714840 ACTAAAAATATTCCTGCATGGATGTTCCAAATATCTCAT-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102775332 41 - 106955855 ACTAAAAATATTCCTGCCTAGATGTTCCAAATATTTCATGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062686 41 + 64156825 ACTAAAAATATTCCTGCATAGATGTTTCAAATATTTTATGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55086129 41 + 59248254 ACTAAAAATATTCCTGCATAGATGTTTCAAATATTTTATGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47248106 41 + 51301725 CCGGAAAACACTCCTGCCTCCGTGTTCCAAATGCCCCATGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46890222 41 + 50890351 ACCAAAAATATTCCTGCATCGATGTTTCAAATATTTTATGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45477243 41 + 49145316 GCTTAAAATATTCCTGCAGGGATGTCCCAGATATTTCATGA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102997935 39 + 122678785 AATAAACA-AAGCTTGTATGTGTGTT-CAAACATTTCATAA i canFam3.chr1 C 0 C 0 e mm10.chr7 3714357 21 + 145441459 I a score=42894.000000 s hg38.chr19_GL949747v2_alt 193944 33 + 729520 ---------GATAGAAAAAAACTCCCATGAATAC-TGAAGTTT-------- s panTro4.chr19 59125722 33 + 63644993 ---------GATAGAAAAAAAACTCCATGAATAC-TGACGTTT-------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004173 32 + 60714840 ---------GATAGAAGAAAA-CTCCACGAATAC-TGACGTTT-------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102775373 32 - 106955855 ---------CATAGAAAAAAA-CTGCATGAATAC-TGGAGTTT-------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062727 31 + 64156825 ---------GATAG-AAAAAA-CTCCATGAATAC-TGAAGTTT-------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55086170 31 + 59248254 ---------GATAG-AAAAAA-CTCCATGAATAC-TGAAGTTT-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47248147 32 + 51301725 ---------GATGG-ACAGAG-CCCGAAGGACACTTTACATTT-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46890263 32 + 50890351 ---------TATAGAAAAAAA-CTCCATGAATAC-TGAAGTTT-------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45477284 33 + 49145316 ---------GATAGAAAACAACTTCCATGAATAC-GGAGGTTT-------- i calJac3.chr22 C 0 I 322 s mm10.chr7 3714378 32 + 145441459 ---------GAGTGAGGAAAT-GTCCCAGAACAT-GGTAATGT-------- i mm10.chr7 I 21 I 9 s canFam3.chr1 102997974 49 + 122678785 GCTTGAAAAGGCAAAAGAAAT-ATTCACAAGTAT-ATTCACATGGACCCCT i canFam3.chr1 C 0 C 0 a score=42553.000000 s hg38.chr19_GL949747v2_alt 193977 28 + 729520 GTAAATGCGTATTGA------AATTACG-----TGCCC-------------------C s panTro4.chr19 59125755 28 + 63644993 GTAAATGCGTGCTGA------CATTACA-----TGCCC-------------------C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004205 28 + 60714840 GTAAATGTGTGCCGA------CATTACG-----TGGCC-------------------C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102775405 28 - 106955855 GTAAATGCGTGCTGA------CATTACG-----TGCCC-------------------C i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062758 28 + 64156825 GTAAATGTGTGCTGA------CATTACG-----TTTCC-------------------C i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55086201 28 + 59248254 GTAAATGTGTGCTGA------CATTACG-----TTTCC-------------------C i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47248179 51 + 51301725 GTAGATG-GGACTGA------CATTAAGTGCTTTTTCCATTTGCCTGGTGAGAAATGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46890295 28 + 50890351 GTAAATGCGTGCTGA------CATTACG-----TTTCC-------------------C i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45477639 28 + 49145316 GTAAATGTGTGCTGA------CATTAGA-----CGCCT-------------------C i calJac3.chr22 I 322 C 0 s mm10.chr7 3714419 34 + 145441459 TTGCATAGATTCTGA------GACCAAT-----TGCCT-----TCTGAT--------C i mm10.chr7 I 9 C 0 s canFam3.chr1 102998023 27 + 122678785 -------CTTTCTGGGTTTCTCATTGGG-----AGATC-------------------C i canFam3.chr1 C 0 n 0 a score=66149.000000 s hg38.chr19_GL949747v2_alt 194005 26 + 729520 TGGAACCGGT---TTTCTAAACTGACACC- s panTro4.chr19 59125783 26 + 63644993 TGGAACCGGT---TTTCTAAACTGACACC- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004233 26 + 60714840 TGGAACCGGT---TTTCTAAACTGACACC- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102775433 26 - 106955855 TGGAACCAGT---TTTCTAAACTGACACC- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062786 26 + 64156825 TGGAACCGGT---TTTCTAAACTGACACC- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55086229 26 + 59248254 TGGAACTGGT---TTTCTAAACTGACACC- i macFas5.chr19 C 0 I 48449 s papAnu2.chr19 47248230 25 + 51301725 TGGAACAGTT---CCTCAAAGCTG-CATT- i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 46890323 26 + 50890351 TGGAACTGGT---TTTCTAAACTGACATC- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45477667 26 + 49145316 TGGAACCGGT---TTTCTAAGCTGACTTC- i calJac3.chr22 C 0 C 0 s mm10.chr7 3714453 29 + 145441459 TGTGATCTGCACGTTTCTAAGCTACCCTG- i mm10.chr7 C 0 I 1 s canFam3.chr1 19702859 24 - 122678785 TGGAA---GT---GTCCTACATCGGCCTTT i canFam3.chr1 I 125 C 0 a score=1111797.000000 s hg38.chr19_GL949747v2_alt 194031 386 + 729520 CCTGTGTGTTTGGG--TTCCCTCTGGCTGGTGCCCTGAGCCCACCCTCGG-------------------TCGACCCA-----------------TGGGTCCC------CCGCTTCCCTACTCACCAGATGTCCTGTGTTTGCTGTGACGCTGACGTCggaggag------gaggaa---gaggaggaggaagagcagcaggacgaAGGCCACCGAGACCCCAATCAAAACCTCCAGGTATCTTCCCAGACCTTGA-CATGA-GGACGTCAGGAGTGGG--AA-TGAtgtcattgatgtgagcacctactgtgtg-caggcgcgagccaggtcttt-ccttcgtgacctccaaccctcacaagcagtcgtgcaacatggaattgccacccgtacaacccatttcacagatgcacaaactgaggctcagagcagggagtcgcctgccc s panTro4.chr19 59125809 386 + 63644993 CCTGTGTGTTTGGG--TTCCCTCTGGCTGGTGCCCTGAGCCCACCCTTGG-------------------TCGGCCCA-----------------TGGGTCCC------CCGCTTCCCTACTCACCAGATGTCCTGTGTTTGCTGTGACGCTGACGTCggaggag------gaggaa---gaggaggaggaagagcagcaggaCGAAGGCCACCGAGACCCCAATCAAAACCTCCAGGTATCTTCCCAGACCTTGA-CATGA-GGACGTCAGGAGTGGG--AA-TGACGTcattgatgtgagcacctactgtgtg-caggcgcgagccgggtcttt-ccttcgtgacctccaaccctcacaagcagtcgtgcaacatggaattgccacccgtacaacccatttcacagatgcacaaactgaggctcagagaggggaatcgcctgccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004259 381 + 60714840 CTTGTATGTTTGGG--TTCCCTCTGGCTGGCGCCCTGAGCCCACCCTTGG-----------------------CCCA-----------------TGGGTCCC------CTGCTTCGCTACTCACCCGATGTCCTGCGTTTGCTCTGACGCTGACGTCggaggag------gaggaa---gaggaggaggaggagcagcaggaCGAAGGCCACCGATACCCCAATCAAAATCTCCAGGTATCTTCCCAGACCTTGA-CATGA-TGACGTCAGGAGTGGG--AA-TGACGTcattgatgtgagcacctactgtgtg-caggcgcgtgctgggtcttt-ccttcatgagctccaaccctcacaagcagtcgtgcaacatggaattgccgccc-cacaacccatttcacagatgcacaaactgaggctcagagcgggtagtcgcctgccc i ponAbe2.chr19 C 0 I 323 s nomLeu3.chr10 102775459 381 - 106955855 --TGTGTGTTTCGG--TTCCCTCTGGCTGGTGCTCTGAGCCCACCCTCGG-------------------TCGGCCCA-----------------TGGGTCCC------CCGCTTCCCTACTCACCAGATGTCCTGTGTTTGCTCTGACGCGGACGTCggaggag------gaggaa---gaggaggaggaagagcagcaggacgaAGGCCACCGAGACCCCAATCAAAACCTCCAGGTATCTTCCCAGACCTTGA-CAT----GACGTCAGGAGTGGG--AA-TGACGTcattgatgtgagcacctactgtgtg-caggcgcgagccaggtcttt-ccttcatgacctccagccctcacaagcagtcgtgcaacatggaattgccgcccccacaacccatttcacagatgcacaaactgaggctcagagcggggaatcgcctgccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062812 375 + 64156825 CCGGTGAGTTTGGG--TTCCCTCTGGCTGGTG---------CACCCTCCG-------------------TCGGCCCA-----------------TGGGTCCC------ACAATTCCCTACTCACCCGATATCTTGTGTTTGCTCTGACGCTGACGTCggaggac------gaggaa---gaggaggaggaagagcagcaggaCGAAGGCCACCGAGACCCCAATCAAAGCCTCCAGGTATCTTCCCAGACCTTGAGCATGA-TAA---CAGGAGTGGG--AA-TGACGTCACTGATGtgagcacctactgtgtg-caggtgcgtgccaggtcttt-ccttcaagacctacaacccttacaagcagttgtgcaacatggaattgccgcccccacaacccatttcacagatgcacaaactgaggctcagagaagtgaaccgcctgtca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55134704 381 + 59248254 CCTGTGTGTTTGGG--TTCCCTTTGGCTGGTGCCCTGAGCCCACCCTCGG-------------------TCAGCCCA-----------------CGGGTCAC------CCCATTCCCTACTCACCCGATGTCCTGTGTTTGCTCTGATGCCGATGTCggaggag------gaggaa---gaggaggaggaagagcagcaggatgaAGGCCACTGAGACCCCAGTCACAACCCCCAGGTGCCTTCCCAGACCTTGTGCGTGA-TGACGTCAGGAATGGG--TA-TGACGTcattgatgtgagcacctactgtgtg-caggcgcgagctaggtcttt-ccttcatgaactccaaccctcac-agcagtcgtgcaacatgggattgccaaccc-----cccaattcacagaggagcaaaccgaggctcagagaggggaatcgcctgccc i macFas5.chr19 I 48449 C 0 s papAnu2.chr19 47248258 377 + 51301725 CCAGTG-GTTTGGA--TTCCCTTTGGCT-GCACCCTGAGCCCACCCTCAG-------------------TCAGCCCA-----------------CAGGGTCT------CCCCTTCCCTACTCACCCGATGTCCAACGTTTGCCCTGACGTCGATGTCggaggacaaggaagaggag---gaggaggaggaagagcagcaggacgaaggCCACCAAGACGCCGGTCACAACCCCCAGGTGCCTTCCCAGACCTTGAGCATGA-TGACATCAGAAATGGG--GG-TGATGTCATTGAAATGAGCTCCTACTGTG----------GTGCTGGACCTTC-TGTTCACCACCTCCAACCCCTAC-AACAGTCGTACAGCACGGAATGGAAACACCCA---CCCACCTTACAgatgga-aaactgaggctcagagaggggaaccGCCTGTCC i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 46890349 375 + 50890351 CCTGTGTGTTTGGG--TTCCCTCTGGCTGGTA---------CACCCTCCG-------------------TCGGCCCA-----------------TGGGGTCC------CCACTTCCCTGCTCACCCGATATCTTGTGTTTGCTCTGACGTTGACGTCggaggac------gaggaa---gaggaggaggaagagcagcaggatgaAGGCCACCGAGACCCCAATCAAAGCCTCCAGGTATCTCCCCAGACCTTGAGCATGA-TAA---CAGGAGTGGG--AA-TGACGTcattgatgtgagcacctactgtgtg-caggcgcgtgccaggtcttt-ccttcaagacctccaacccttacaagcagttgtgcaacatggaattgccgcccccacaacccatttcatagatgcacaaactgaggctcagagaggggaatcgcctgccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45477693 383 + 49145316 CCTGTGTGTTCTGG--CTCCCTCTGGCTGGTGCCCTGAGCCCACCCTTGG-------------------CCAGCCCA-----------------TGGGTACC------CCCCTTCCCTACTCACCCAAGGTTCTGTGTTTCTTCTGACGCCGGTGTCggaggag------gaggaagaggaggaggaggaggagcagcaggaTGAAGCCCATGGAGACCCCAGTCAACACCTCCAGGTACCTTCCCAGACCTTGAGTGTGA-TGACGTCAGGAATGAG--GA-TGAtgtcattgatgtgagcacctactgtgcg-caggcgtgtgccaagtc-----attcatgagctctaaccctcac-agcactcatgcaacatgggattgctgcccccacaacccatttcacagatacataaactgaggctcagag--ggcaatcgcctgccc i calJac3.chr22 C 0 C 0 s mm10.chr7 3714483 379 + 145441459 CCCA---GGTTGAGCTTTCCCTATGGCTGGTG-TCTGAGCGCCTGCTTCGATGTTCACAGGGAGACACACCACCTCC-----------------TGAGACCCAAGTTACACATACCCTCCTCACCATCTTTCCTGAATTTTCCCCGATGTCTTCGTCGAAGAAG------AATGAA---GATGAAGATGAAGAGGAACAGGATGAAGGCCACAGACACTCCAATGAGAGCCTTCAGGTACATATGCAGTCCTGAGGCACAAGTGACATCATTAGTGGA--GACCTTTGCTGCTTACctgagcacctactgtgtgacaggctcatgctgggtctctgcacacaTCATCCCCCATCTTTAC----AATCATGTACCATGGAATTGTGTCTTTTcctgtccagccagt-------------------------------tcacctgact i mm10.chr7 I 1 C 0 s canFam3.chr1 19702883 405 - 122678785 CCCACCTCTCTGGG--TTCCCTCTGGCTGCTGCCCTGAGCCCACCCTGGG-------------------TCAGCCCACAGAGCACCACCACCCCTGGGGTGC------CTCAGCCCCTTCTTACTTGACTTCCTGCATTTGCCCCGACGTTGCTGTCGGACCAG------GAAGAG---GATGAGGAGGCAGAGCATCAGGATGAAGGCCACCGAGGACCCGATGAGGACGTACAGGTACCAGCTAGGACCTTGGGCAGGAGCTATACCATGAATGAGCCAG-TGATTCCATtttactgagcacctactgtgtgccaggcacctgctgggctctg-tgcttgc-acctgtgactctgac-aatgatcatgcagcaggggattgctgtccctcccacctgctccacagac-tgtaaactgaggcacagaggggtcaatcacgtgtcc i canFam3.chr1 C 0 C 0 a score=5177.000000 s hg38.chr19_GL949747v2_alt 194417 2 + 729520 ca s panTro4.chr19 59126195 2 + 63644993 cg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102775840 2 - 106955855 cg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063187 2 + 64156825 ca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55135085 2 + 59248254 ca i macFas5.chr19 C 0 I 501 s papAnu2.chr19 47248635 2 + 51301725 CA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46890724 2 + 50890351 ca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478076 2 + 49145316 ca i calJac3.chr22 C 0 C 0 s canFam3.chr1 19703288 2 - 122678785 ca i canFam3.chr1 C 0 C 0 e mm10.chr7 3714862 0 + 145441459 C e ponAbe2.chr19 56004640 323 + 60714840 I a score=6152.000000 s hg38.chr19_GL949747v2_alt 194419 2 + 729520 gg s panTro4.chr19 59126197 2 + 63644993 gg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102775842 2 - 106955855 gg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063189 2 + 64156825 ga i rheMac3.chr19 C 0 I 41 s macFas5.chr19 55135588 2 + 59248254 gg i macFas5.chr19 I 501 C 0 s papAnu2.chr19 47248637 2 + 51301725 GG i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46890726 2 + 50890351 gg i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45478078 2 + 49145316 gg i calJac3.chr22 C 0 C 0 s canFam3.chr1 19703290 2 - 122678785 gg i canFam3.chr1 C 0 C 0 e mm10.chr7 3714862 0 + 145441459 C e ponAbe2.chr19 56004640 323 + 60714840 I a score=51085.000000 s hg38.chr19_GL949747v2_alt 194421 30 + 729520 -cctccagcgaggaagcggcagagctgggaa s panTro4.chr19 59126199 30 + 63644993 -cccccagcaaggaagcagcagagctgggaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102775844 30 - 106955855 -cccccagccaggaagcggcagagctgggaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55135590 30 + 59248254 -ccccacggtgggatgcagccgagccgggaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47248640 30 + 51301725 -CCCCCAGCCGGGAAGCGGCAGAGCTGGGAA i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46890729 30 + 50890351 -cccccagccaggaagtggcagagctgggaa i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45478080 30 + 49145316 -tccccagccaggtggtggcagagctgggga i calJac3.chr22 C 0 C 0 s mm10.chr7 3714862 15 + 145441459 -----------ggaagtggcagagtt----- i mm10.chr7 C 0 C 0 s canFam3.chr1 19703292 31 - 122678785 tcgtccagtgtggaggtggcagggctgggac i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56004640 323 + 60714840 I e rheMac3.chr19 60063191 41 + 64156825 I a score=289560.000000 s hg38.chr19_GL949747v2_alt 194451 136 + 729520 gggagcccgggag---------------tctgacc-tgcagcccttgt----t-cctgcaccaGAG--CCGAGACCCG-GAGCTGCAGGGAAAGAGCCTGACC----------GTCCTGAACCA---------------------------------CGGCCCTGCTCCCCTCCCCTGCCCC----AGGTCACCGTCACTGCTGCAG s panTro4.chr19 59126229 136 + 63644993 gggagctcgggag---------------tctgacc-tgcagcccttgt----t-cctgcaccaGAG--CCAAGACCCG-GAGCTGCAGGGAAAGAGCCTGACC----------ATCCTGAACCA---------------------------------CAGCCCTGCTCCCCTCCCCTGCCCC----AGGTCACCGTCACTGCTGCAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102775874 136 - 106955855 gggagcccgggag---------------tctgacc-tgcagcccttgt----t-ccttcACCAGAG--CTGAGCCCCG-GAGCTGCAGGGAAAGAGCCTGACC----------TTACTGAATCA---------------------------------CTGCCCTGCTCCCCTCCCCTGCCCC----AGGTCACCGTCTCTGCTGCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063232 137 + 64156825 gagaaccgggaag---------------tctgacc-cgcagcccttgt----tccctgcaccgGAG--CTGAGCCCCA-GAGATGCAGGGAAAGAACCTGACC----------GTCCTGAACCA---------------------------------CAGCCCTGCTCCCCTCCCCTGCCCC----AGGTCACCGTCACCGCTGCAG i rheMac3.chr19 I 41 C 0 s macFas5.chr19 55135620 137 + 59248254 gggaacccaggag---------------tctgacc-tgcagcccttgt----tcccagcaccaGAG--CCGAGCCCCG-GAGATGCCGGGAAAGAGCCTGAAT----------GCCCCAAACCA---------------------------------TGGCCCTGCTCCCCTCCTCCACTCC----AGGTCTCCGTCACTGCTGCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47248670 137 + 51301725 GGGAACCCGGGAG---------------TCTGACC-CGCAGCCCCTGT----TCCCTGCACCAGAG--CTGAGCCCTG-GAGCTGCAGGGAAAGAGCCTGACC----------ATCCTGAACCA---------------------------------Cagccctgctcccctcccctgcccc----aggtCACCGTCACTGCTGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46890759 127 + 50890351 gggaacctgggag---------------tctgacc-cgcagcccttgt----tcccagcaccaGAG--CTGAGCCCT-----------GGAAAGAGCCTGACC----------GTCCTGAACCA---------------------------------CGGCGCTGCTCCCCTCCCCTGCCCC----AGGTCACCGTCACTGCTGCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478110 135 + 49145316 gggaacccaggag---------------tctgacc-tgcagcccttgt----tccctgtact-gAG--CTGAGCCCCG-GAGCTGCAGGGAAAGAGCCTGACC-----------TCCTGAACCA---------------------------------CGGCCCTGCTCCCCTCCCCTGCCCC----AGGTCAGCGTCACTGCTGCAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3714877 122 + 145441459 --gaacccagaat--------------ctctgact-tccagccc-tgc----tctctgcaccaGAG--CTGAGAGCAATGAGTTG---GAGAGGAGTGTGAAT----------GTCGTG--CTA---------------------------------TGGCTGTGTATCCCACCCTTACTC-----------ATGTCGCTACAGC-- i mm10.chr7 C 0 C 0 s canFam3.chr1 19703323 203 - 122678785 aggaagttgggatgaaggttccctgtgctctACTCATGCCTCCCCTGTGAGGTCACCACTCCGAGGCTCTGGGCTCCT-CATTTG---GGGCAGGATCTGTCCCAGCATCTTCATCCTGAGCTGAGGGTCCTTCCAGACCTCAACACCCCCAGCCATCAACTTCCCTCTCCTCCCCTCCTCCTACAATATCACTGTCATTGCTGCAG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56004640 323 + 60714840 I a score=250664.000000 s hg38.chr19_GL949747v2_alt 194587 107 + 729520 GTGGGACGGGACAGGCCCCTGT---GGAATCG-GGTCTGGGAGG-TTCCCTGGGAGGCCTCCTCTCCCAG--GAGGTCACAGCTGGGGgtcagagctgaaaggaactttcccac s panTro4.chr19 59126365 107 + 63644993 GTGGGACAGGACAGGCACCTGC---GGAATCG-GGTCTGGGAGG-TTCCCTGGGAGGCCTCCTCTCCCAG--GAGGGCACAGCTGGGGgtcagacctgaaaggaactttcccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004963 105 + 60714840 GTGGGACAGGACAGGC-CCTGC---AGAATCA-GGTTTGGGAGG-TTCCCT-GGAAGCCTCCTCTCCCAG--GAGGTCACAGCTGGGAgtcagagctgaaaggagctttcccac i ponAbe2.chr19 I 323 C 0 s nomLeu3.chr10 102776010 107 - 106955855 GTGGGACAGGACAGGCCCCTGC---GGAGTCA-GGTCTGGGAGG-TTCCCTGGGAGGCCTCCTCTCCCAG--GAGGTCACAGCTGGGAgtcagaactgaaaggaactttcccac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063369 107 + 64156825 GTGGGACAGGACAGGCCCCTGT---GGAATCG-ACTCTGGGAGCCTTCCCT-GGAGGCCTCCTCTCCCAG--GAGGTCACAGCTGGGAgtcagagctgaaaggaacgttcccac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55135757 32 + 59248254 GTGGGACAggacaggcccctga---agaa-------------------------------------------------------------------------------tcccac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47248807 108 + 51301725 GTGGGACAGGACAGGCCCCTGC---GGAATCG-GGTCTGGGAGGCTTCCCTGGGAGTTCTCCTATCCCAG--GAGGCCACAGCTGGGAGTCAGAGCTGAAAGGAACGTTCCCAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46890886 108 + 50890351 GTGGGACAGGACAGGCCCCTGC---GGAATCG-GGTCTGGGAGGCTTCCCTGGGAGGCCTCCTCTCCCAG--GAGGTCACAGCTGGGAgtcagagctgaaaggaacgttcccac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478245 107 + 49145316 GTGGGACAGGATAGGCCCCTGT---GGAATCG-GGTCTGGAGGC-TTCCCTGGGAGGCCTCCTCCCCCAG--GAGGTCACAGCTGGGAgtcagagctgaaaggaactttcccac i calJac3.chr22 C 0 C 0 s mm10.chr7 3714999 91 + 145441459 GTGGCTCTGGGC-----CCTGC---AGAATCA-GA----------TTCT---GGAGGCCTTTTCTGTCAGGAGAGGTCACCACCAAG-GCCAGCACAGaaacaaacaaacaaac i mm10.chr7 C 0 I 106 s canFam3.chr1 19703526 103 - 122678785 ------AGGGACAGACACCTTCCCTAGAATCATGATTTGGGTAACTTCCCCATGAGCCCTCCTCTCCCag--gaggtcagagccatg-gtcagaacc--aaggacaaatctaat i canFam3.chr1 C 0 C 0 a score=767036.000000 s hg38.chr19_GL949747v2_alt 194694 276 + 729520 c---------------------cacaggcctctctcctttacacttggagaaactgaggcccaggcaggggaggggcctgtccacatcaccacctccagaggagcctgaacctaggacagaacccacccctgcctcccCTGGACCCCGCCCATCTCCCACT--CAGAGCCCCTCACTCACGATTCT--GAGGGCCTGACCCTGGGGGGTTAAGGGGCTGGTCCTCAGGACCTCCT-GGGTCAGGACAGGG--AGGTGAAGGCTGGGGCTGTCTTGCCCCCCACATCAGCCCGGCTCCTCCTCCT-- s panTro4.chr19 59126472 276 + 63644993 c---------------------cgcaggcctctctcctttacacttggagaaactgagtcccatgcaggggaggggcctgtccacatcgccacctccagaggagcctgaacctaggacagaacccacccctgcctcccCTGGACCCCGCCCACCTCCCACT--CAGAGCCCCTCACTCGCCACTCT--GGGGGCCTGACCCTGGGGGGTTGAGGGGCTGGTCCTCAGGACCTCCT-GGGTCAGGACAGGG--AGATGAGGGCTGGGGCTGTCTTGCCCCCCACATCAGCCCGGCTCCTCCTCCC-- i panTro4.chr19 C 0 I 3 s ponAbe2.chr19 56005068 273 + 60714840 c---------------------cgcaggcctctctcctttacacttggagaaactgaggcccaggcagggga-gggcccgtccacatcgccacctccagaggagcctgaacctaggacagaacccactcctacctcccCTGGACCCCGCCCACCTCCCACT--CAGAGCCCC-CACTCACCACTCT--GAGGGCCTGACCCTGCGGGGTTGAGGGGCTGGTCCTCAGGGCCTCCT-GGGTCAGGACAGGT--AGGTGAGGGCTGGGGCTGCCTTGCCCCCCACATCAGCCTGGCTCC-CCTCCC-- i ponAbe2.chr19 C 0 I 3 s nomLeu3.chr10 102776117 275 - 106955855 c---------------------cgcaggcctctctcctttacacttggagaaactgaggcccaggcaggggaggggcctgtccaCATCGCCACCTCCAGAGGAGCCGGAACCTAGGACAGAACTGACCCCCGCCTCCCCAGGACCCCGCCCACCTCCCACT--CAGAGCCCC-CACTCACCACTCT--GGGGGCCTGACCCTGAGGGGCTGAGGGGCTGGTCCTCAGGGCCTCCT-GGGTCAGGATGGGG--AGGTGAGGGCTGGGGCTGCCTTGCCCTCCACGTTAGCCGGGCTCCTCCTCCC-- i nomLeu3.chr10 C 0 I 10613 s rheMac3.chr19 60063476 275 + 64156825 c---------------------cgcaggcttctttcctttacacctggagaaactgaggcccaggcagcggaggggcctgtccacgtcaccatctccagaggggcctgaacctaggacagaagccacctctgcctcccCAGGACCCCGCCCACCTTCCTCT--CAGAGCCCC-CACTCACCACTCT--GGGGGTCCGACCCCGTGGGGGTGAGGGGCTGGTCCTCAGGGCCTGCT-GGGTCAGGATGGGA--AGGTGAGGGCTGCGGCTGCCCTGCTCCCCACGTCAGCCCGGCTGCTCCTCCC-- i rheMac3.chr19 C 0 I 3 s macFas5.chr19 55135789 278 + 59248254 ct-------------------gtgcaggcctctctcctttacacttggagaaactgaggcccaggcaggggaagggcttgtgcacgtcaccatctccggaggagcctgaacctaggacagaacccagccctggctcctccggaccccgtccacctcccact--cagagcccctcactcaccactct--gGGGGTCTGACCCTGTGGGGGTGAGGGGCTGGTCCTCAGGGCCTGCT-GGGTCAGGATGAGG--AGGTGAGGGCTGGGGTGGCCCTGCCCCCCACGTCAGCCCGGCTGCTCCTCCC-- i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47248915 274 + 51301725 C---------------------TGCAGGCCTCTCTCCTTTACacctggagaaactgaggcccaggcaggggaggggcctgTCCACGTCACCATCTTCAGAGGAGGCTGAACCTAGGACAGAATCCACCCCTGCCTCCCC-GGACCCCGCCCACCTTCCTCT--CAGAGCCAC-CACTCACCACTCT--GGGGATCCGACCCCGTGGGGTTGAGGGACTGGTCCTCAGGGCCTGCT-GGGTCAGGATGGGA--AGGTGAGGGCTGGGGCTGCCCTGCCCCCCATGTCAGCCCGGCTGCTCCTCCC-- i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 46890994 275 + 50890351 c---------------------cgcaggcttctttcctttacacctggagaaactgaggcccaggcaggggaggggcctgtccacgtcaccatctccagaggggcctgaacctaggacagaagccacccctgcctcccCGGGACCCCGCCCACCTTCCTCT--CAGAGCCCC-CACTCACCACTCT--GGAGGCCTGACCCTGAGGAGTTGAGGGGCTGGTCCTCAAGGCCTTCT-GGGTCAGGACAGAG--AGGTGAGGGCTGGGGCTGCCCTGCCCCCCATATCAGCCTGGCTCCTCCTTCC-- i chlSab2.chr6 C 0 I 4 s calJac3.chr22 45478352 266 + 49145316 ta-------------------gtgcag------tttctctctccttggagaaactgaggcccaggtgggagaggggcctgtccctgtcaccatctccagaggaacctgaacctaggacagaacccacccctgcctttcctgga-cctgcccacct---gct--cagacaccctCACTCACTACTCT--GGGGGCCTGACCT--GAGGGGTGAGGGGCTGGTCCTCAGGGCCTCCT-GGGTCAGCACAGGG--AGCTGAGGGCTGGGGCTGCCTTGTCCCCCACATCAGCCCAGCTGCTCCCCCA-- i calJac3.chr22 C 0 C 0 s mm10.chr7 3715196 278 + 145441459 -CCAAATAAGTTAAGACATGAGGGCAGGTTTCT---CTTTATACTCAGAGGAACAGCAGCCTA-GCAAGAGAAGGACTTGACCAAGTCAAGCTATCTAGAGGCAGCTGTATC-AAGACTCTAACTAGCTATTGTTCATCTGA-----GCACATATTTTAAC--AAA-----C-TGTTTATTAGTCTTCTGAGGCCTGACTCCATGCAGGTGACAGG--GGCCATGCCGAGCTTTA-GGGGTAAGATAGGG--AACTGAGTGTTTGTGTT-CCCTGCTTTCAACTTCC-CACAACTGCCCCACCC-- i mm10.chr7 I 106 I 3 s canFam3.chr1 19703629 236 - 122678785 ------------------ctgggccatgactctctcttttacacttggggaaactgaggcccacacatgggaggggcatgtccaagacagggaatgtagagggtcatgaagtgagggtgtaaatcagccctgatccccaTGA--CCCACCCACCACCTCCTGACAGAGACCCTCACTTAC-----------------------------------------CCTCAGAGACTCCTGGGGTCAGTAGAGGGTCAGGGGAGGGCCTGTGTG-------CTTCCACTGCA--CCTGCTGCCCCTCCCCC i canFam3.chr1 C 0 C 0 a score=202934.000000 s hg38.chr19_GL949747v2_alt 194970 71 + 729520 GGCTGGGCCCCAACATCTCCCTCTGCCTCGACCCCCC---ACTCTTCACCAGCCCAGCCTCAGAGCCCC------------------TGGGA s panTro4.chr19 59126751 71 + 63644993 GGCTGGGCCCCAACATTTCCCTCTGCCTCAACCCCCC---GCCCCTCACCAGCCCAGCCTCAGAGCCCC------------------TGGGA i panTro4.chr19 I 3 C 0 s ponAbe2.chr19 56005344 71 + 60714840 GGCTGGGCCCCAACATCTCCCTCTGCCTCGAACCCCC---GCCCCTCACCAGCCCAGCCTCAGAGCCCC------------------TGGGA i ponAbe2.chr19 I 3 C 0 s nomLeu3.chr10 102787005 72 - 106955855 GGCTGGGCCCCAACATCTCTCTCTGCCTTGACCCCCC--TACTCTTCACCAGCCCAGTCTCAGAGCCCC------------------TGGGA i nomLeu3.chr10 I 10613 C 0 s rheMac3.chr19 60063754 72 + 64156825 GGCTGGGCCCCAACACCTCCCTCTGCCTCGCGCCCCC--CGCCCCTCACCGGCCCAGCCTCGGAGCCCC------------------TGGGA i rheMac3.chr19 I 3 I 81543 s macFas5.chr19 55136070 72 + 59248254 GGCTGGGCCCCAACACCTCCCTCTGCCTCGCGCCCCC--CGCCCCTCACCGGCCCAGCCTCGGAGCCCC------------------TGGGA i macFas5.chr19 I 3 I 39 s papAnu2.chr19 47249192 61 + 51301725 GGCTGGGCCCCAACACGTCCCTCTGCCT-----------CGACCCTCACCGGCCCAGCCT--GAGCCCC------------------TGGGA i papAnu2.chr19 I 3 I 39 s chlSab2.chr6 46891273 72 + 50890351 AGCTGGGCCCCAACACCTCCCTCTGCCTTGAACCCCC--CACTCCTCAGCAGCCCAGCCTCAGAGTCCC------------------TGGGA i chlSab2.chr6 I 4 C 0 s calJac3.chr22 45478618 71 + 49145316 TGCTGGGCCCCAATATCTGCCTTTGCCTTGACCCCCC---ACCCCTTACCAGCCCAGCCTCAGAGCCCC------------------TGGGA i calJac3.chr22 C 0 C 0 s mm10.chr7 3715477 81 + 145441459 TGATGAGCCTAAATACTTCTCTCTGAATC-----------TCCCTGCTGTAGCCCAACCTCTGAGCCCCAGCTTCAGTGGTCTCTGGTGAGA i mm10.chr7 I 3 I 21 s canFam3.chr1 19703865 67 - 122678785 AGATGGGTCCCCACCCCTCCCTATCCCATGAACACCCAGCCTCCTCCACCAGCCGAG-------ACCCC------------------TGGTG i canFam3.chr1 C 0 C 0 a score=28879.000000 s hg38.chr19_GL949747v2_alt 195041 20 + 729520 --CACAAGCCCGTCCTTGAGGG s panTro4.chr19 59126822 20 + 63644993 --CACAAGCCCGTCCTTGAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005415 20 + 60714840 --CACAAGCCCGTCCTTGAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102787077 20 - 106955855 --CACAAGCCCGTCCTTGAGGG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55136181 20 + 59248254 --GGGAAGCTCGTGCTTGAGTC i macFas5.chr19 I 39 I 3 s papAnu2.chr19 47249292 20 + 51301725 --TGGAAGCCCGAGCTTGAGTC i papAnu2.chr19 I 39 I 3 s chlSab2.chr6 46891345 20 + 50890351 --CACAAGCCTGTCCTAGAGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478689 20 + 49145316 --CACAAGCCCATCCTTGAGGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3715579 13 + 145441459 --TACAAGC-------TGAAGT i mm10.chr7 I 21 I 2 s canFam3.chr1 19703932 18 - 122678785 CCCATCGGCCCCCTTTCA---- i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60063826 81543 + 64156825 I a score=103390.000000 s hg38.chr19_GL949747v2_alt 195061 47 + 729520 GAGGGGAGTGGGATCCTTTGGGAGACTCA-GACTG----C-------CCTGGGGGAGGC s panTro4.chr19 59126842 47 + 63644993 GAGGGGAGTGGGATCCTTAGGGAGACTCA-GACTG----C-------CCTGGGGGAGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005435 47 + 60714840 GAGGGGAATGGGATCCTTAGGGAGACTCA-GACTG----C-------CCTGGGGGAGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102787097 47 - 106955855 GAGGGGAGTGGGATCCTTTGGGAGACTCA-GACTG----C-------CCCGGGGGAGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145369 48 + 64156825 GAGGGGAATGGGATCCTCTGGGAGACTCAGGACTG----C-------CCTGCGGGAGGC i rheMac3.chr19 I 81543 I 19 s macFas5.chr19 55136204 48 + 59248254 GAGGGGAATGGGATCCTCCAGGAGACTCAGGGCTG----C-------CCTGGGGGAGGC i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47249315 35 + 51301725 GAGGGGAATGGGA--CTCTGGGAAATG----------------------TGTGGGAGGC i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 46891365 47 + 50890351 GAGGGGAATGGGGTCCTTCGGGAGACTCA-GACTG----C-------CCTGGGGGAGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478709 48 + 49145316 GAGGGGAATGGGATCTTTTGGGAGACTCAGGACTG----C-------CCTGGGGGAGGC i calJac3.chr22 C 0 C 0 s mm10.chr7 3715594 54 + 145441459 GATAGAAATGAGG-ACTGTGGTGGGCCAAGAGCTG----CCAGGCAGCCTGGGGTGGGA i mm10.chr7 I 2 I 1 s canFam3.chr1 19703950 33 - 122678785 --------------TCTCTGAGAGACTGG-AACCAAAGCC-------CCTGGACG---- i canFam3.chr1 C 0 C 0 a score=21014.000000 s hg38.chr19_GL949747v2_alt 195108 12 + 729520 GGCGCTCCCCAC s panTro4.chr19 59126889 12 + 63644993 CGCGCTCCCCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005482 12 + 60714840 CGCGCTCCCCAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102787144 12 - 106955855 TGCGCTTCCCAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55136252 12 + 59248254 CGTGCTCCCTCT i macFas5.chr19 C 0 I 5 s papAnu2.chr19 47249350 12 + 51301725 CGTGCTCCCTCT i papAnu2.chr19 C 0 I 7 s chlSab2.chr6 46891412 12 + 50890351 TGCGCTCCCCAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478757 12 + 49145316 CGTGCTCCCCAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3715649 12 + 145441459 AATACTCCCTGC i mm10.chr7 I 1 I 2 e canFam3.chr1 19703983 0 - 122678785 C e rheMac3.chr19 60145417 19 + 64156825 I a score=160674.000000 s hg38.chr19_GL949747v2_alt 195120 54 + 729520 GAGGCCTCAGTGACTCACCAGGTGTGGAGGGCGGCCCTGTGGGTGGGAGGCTGG s panTro4.chr19 59126901 54 + 63644993 GAGGCCTCAGTGACTCACCAGGTGTGGAGGGCGGCCCTGTGGGTGGGAGCCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005494 54 + 60714840 GAGGCCTCAGTGACTCACCAGATGTGGAGGGCGGCCCTGTGGGTTGGGGGCTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102787156 54 - 106955855 GAGGCCTCAGAGACTCACCAGGTGTGGAGGGCGGCCCTGTGGGTGGGGGGCTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145436 54 + 64156825 GAGGCCTCAATGACTCACCCGGTGTGGAGGAGGAGCCTGTGGGTTGGGGGCTGG i rheMac3.chr19 I 19 I 168 s macFas5.chr19 55136269 54 + 59248254 CAGATCTCAACGACTCACCAGGTGTGGGGGTGGAGCCTGTGGGTGGGGGGCTGG i macFas5.chr19 I 5 C 0 s papAnu2.chr19 47249369 54 + 51301725 GAGGCCTGAGAGACTCACCAGGTGTGGGGGTGGGACCAGTGAGTGGGGGGCTGG i papAnu2.chr19 I 7 C 0 s chlSab2.chr6 46891424 54 + 50890351 GAGGCCTCAGTGACTCACCAGGTGTGGAGCGTGGCCCTGTGGGTGGGGGGCTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478769 51 + 49145316 GAGGCCTCCATGACTCACCAGGTGTGG---TTGGCCCTGCGGGTGGTGGGCTGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3715663 54 + 145441459 AGAGTACCTGATACTTACCACCTAGTGGCATGGACATTGTGGGTGGCGGGGTAG i mm10.chr7 I 2 C 0 s canFam3.chr1 19703983 54 - 122678785 GACGCCCCTGTAACTCACCAGCTGTTGGGCTGGATATTGTGGGTGGGGGACCAT i canFam3.chr1 C 0 C 0 a score=227169.000000 s hg38.chr19_GL949747v2_alt 195174 178 + 729520 AGCCTCCAGAGTGTCCTGGA-AGGAGCACGGGAGGCGGGTGAGGGGCGGGGGCCGTCCATGGAGTGCACCCTTCCACTCCCA---CTCTCCTGCTTCCGCCCAGTGGATTCCCTGGAACCATCTCTCTGCCCACCTGGTGCCTTCTGCATGCCAG----GCAGGGGAGAA-CGGGTGGCCACGCCTA s panTro4.chr19 59126955 178 + 63644993 AGCCTCCAGAGGGTCCTGGA-AGGAGCACGGGAGGCGGGTGAGGGGCGGGGGCCGTCCATGGAGTGTACCCTTCCACTCCCA---CTCTCCTGCTTCCGCCCAGTGGATTCCCTGGAACCATTTCTCTGCCCACCTGGTGCCTTCTGCATGCCAG----GCAGGGGAGAA-CGGGTGGCCATGCCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005548 178 + 60714840 AGCCTCCAGAGGGTCCTGGA-AGGAGCACAGGAGGCGGGTGAGGGGCTGGGGCTGTCCATGGAGGGCACCCTTCCACTCCCA---CTCTCCTGCGTCTGCCCAGTGGATTCCCTGGAACCATTTCTCTGCCCACCTGGTACCTTCTGCATGCCAG----GCAGGGCAGAA-CAGGTGGCCATGCCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102787210 178 - 106955855 AGCCTCCAGATGGTCCTAGA-AAGAGCACAGGAGGCGGGTGAGGGGCTGGGGCTGTCCATGGGGTGCACCCTTCCACTCCCA---CTCTCCTGCATCCGCCCAGGGGATTCCCTGGAACCATTTCTCTGCCGACCTGGTACCTTCTGCATGCCAG----GCAGGGGAGAA-CGGGTGGCCATGCCTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55136323 177 + 59248254 GGTCCCCAGAGGGTCCTGGGAATAAGCACAGGCAGGGAGTGAGGAGCTTTGGT--GC--TGGAGTCCCCTCCTCCACTGAGA-CCCCTCCCTCCACCTGCTCTGTGGCTTCTCCGGAAC-TTCCTTCTGCTTACCTTTCACCTTTTGTGTCCCAG----GAGATGGGGCCAAGGGTGGGCGTGCCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47249423 177 + 51301725 GACTCCCAGAGGGTCCTGGGTTAAAGAATGAGAGGAAGCTGAGGAGCGGGGCT--TCCTTGCAGTCCCCGCCTCAAACCAAA---TTTCTCTACACGGGCCATGTGGCCTCCTCAGGCCACTCCCTCCACCCACCTCTC-CTCTTCATGATGCTG----GCGATGCCGCTGAGGGTGAGCATGCCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46891478 176 + 50890351 AGCCTCCAGAGGGTCCTGCG-AGGAGCAC-GGAGGCGGGTGAGGGACTGGGGCCGTCCATGGAGTGCACCCTTCCACTCCCA---CTCTCCTGCATCTGCCCAGTGGATCCCCAGGAACCATTTCTCTGCCCACCTGGTACCTTCTGCATGCCAG----GCAAGGAGAAC--GGGTGGCCATGCCTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478820 174 + 49145316 AGCCTGCAGAGGGTCCTGGA-AGGAGTACAGGAGGTGGGTGAGG-GCCCGGGCTGTCTGTGGAGCACACACTTC-ACTCCAG---CTTCCCTGCGTCCACACAGTGCATTCCCTGGAAACATTTCTCTGCCCACCTGGTACCTTCTGCATGCCA-----GCAAGGCATAC--GGGTGGCCATGCCTA i calJac3.chr22 C 0 C 0 s mm10.chr7 3715717 169 + 145441459 AGGTTTCGATGGGTCCTAGGAAAGAGAACAAGAAGAGGACGAGGATTAGATGCAAGCCCAGGA-TCCTCACTTG---GTTCA---CTGTCCTCTATCTGCCCTGTAAACTCTGCAAGA---------TACTGA--TAGTCGCTACTCCAAACCTAGATTGCAGTAGAGGACTGAGTGGACATTACTC i mm10.chr7 C 0 I 3 s canFam3.chr1 19704037 169 - 122678785 GGTGTCCAGAGGATCCTGTGCAAAAAGACAGGAG------CGGGGGCAGGAGCTTCCCTTAGAGACCCTGTCTATGCTCACACCCCTCCTCTTCATTTACCCTGAGG--TCCCCAGGTACTCCTCCTCCTCCACGTGGAAAATTCTG-GTGACGG----GGGCGAGGGAA-GGGGCAGGAGTG---- i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60145490 168 + 64156825 I a score=5650.000000 s hg38.chr19_GL949747v2_alt 195352 7 + 729520 GGAGAAC s panTro4.chr19 59127133 7 + 63644993 GGAGAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005726 6 + 60714840 GGAGAA- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102787388 7 - 106955855 TGAGAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145658 7 + 64156825 GGAGAAC i rheMac3.chr19 I 168 T 80755 s macFas5.chr19 55136500 6 + 59248254 -GGGTGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47249600 6 + 51301725 GGAGGG- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46891654 7 + 50890351 GGAGAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478994 7 + 49145316 CGAGAAC i calJac3.chr22 C 0 C 0 s mm10.chr7 3715889 4 + 145441459 GGAG--- i mm10.chr7 I 3 C 0 s canFam3.chr1 19704206 6 - 122678785 GGAGGG- i canFam3.chr1 C 0 C 0 a score=63780.000000 s hg38.chr19_GL949747v2_alt 195359 57 + 729520 CCCTGTTGGCCTCCTCCCCTCTG-AGGGCTGGGT-GCCCTCTGGCTAAGCC----TCCCTC----AC s panTro4.chr19 59127140 57 + 63644993 CCCTGTTGGCCTCCTCCCCTCTG-AGGGCTGGGT-GCCCTCTGGCTAAGCC----TCTCTC----AC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005732 56 + 60714840 CCCTGTTGGCC-CCTCCCCTCTG-AGGGGTGGGT-CCCATCTGGCTAAGCC----TCCCTC----AC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102787395 57 - 106955855 CCCTGTTGGCCTCCTCCCCTCTG-CGGGCTGGGT-CCCCTCTGGCTAAGCC----TCCCTC----AC i nomLeu3.chr10 C 0 I 761 s macFas5.chr19 55136506 60 + 59248254 CCCCACTGTCCTCCTCCCCTCTG-AGGTGTGAGTCCCCCTCTGGCTGAGCC----TCCCATCACG-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47249606 56 + 51301725 CCCTGTTGTCCTCCTCCCCTCTG-AG--GTGAGTGCCCTTCTGGCTAAGCC----CCGCTT--AG-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46891661 54 + 50890351 CCCTGTTGGCCT-CTCCCCTCTG-AGGGCTGCGT-CCCCTCTGGCTAAGCC----TCCCTC------ i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45479001 56 + 49145316 CCCTGCTGGCTTCCT-CCTGCTG-AGGACTGAGG-CCCTTCGGGCTAAACC----TCCCTC----AT i calJac3.chr22 C 0 C 0 s mm10.chr7 3715893 60 + 145441459 CACTGCTAGCATTAATTCCTCTGCCAGGGAAACT-GTCTTCTGACAAAGCCATCTTCCTTT------ i mm10.chr7 C 0 C 0 s canFam3.chr1 19704212 25 - 122678785 ----------------CAGTGTG-AAGGGTGGAC-TCCCTCAG------------------------ i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60145665 80755 + 64156825 T a score=-8230.000000 s hg38.chr19_GL949747v2_alt 195416 12 + 729520 AGCCTC-----CCTCGG s macFas5.chr19 55136566 16 + 59248254 -ACCCCCCCAACCCCGA i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47249662 11 + 51301725 -ATCCC-----TGCTCA i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46891715 1 + 50890351 ----------------A i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45479057 12 + 49145316 AACCTC-----CCTCCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3715953 10 + 145441459 --TGTC-----TCCTTA i mm10.chr7 C 0 I 2 s canFam3.chr1 19704237 11 - 122678785 AGCCCC-----TCTCT- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56005788 0 + 60714840 C e nomLeu3.chr10 102787452 761 - 106955855 I e rheMac3.chr19 60145665 80755 + 64156825 T e panTro4.chr19 59127197 0 + 63644993 C a score=37884.000000 s hg38.chr19_GL949747v2_alt 195428 30 + 729520 TCCATCCCAGCCGAGAGCTCTCCTGGGGGC s panTro4.chr19 59127197 27 + 63644993 TCCATCCCAGCTGAGA--TCTCCT-GGGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005788 30 + 60714840 TCCATCCCAGCCGAGAGCTCTGCTCGGGGC i ponAbe2.chr19 C 0 I 4269 s nomLeu3.chr10 102788213 27 - 106955855 TCCGTCTCAGCTGAGA--TCTCCT-GGGGC i nomLeu3.chr10 I 761 C 0 s macFas5.chr19 55136583 30 + 59248254 TCCATCCTAGCCCAGAGCTCTCCTAGGGGC i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47249674 29 + 51301725 TCCATCCCAGCCCAGAGCTCTCCT-GGGGC i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46891717 27 + 50890351 TCCCTCCCAGCTGAGATCTCTG---GGGGC i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45479069 18 + 49145316 TCCATCCT---------CCCTCCTCAG--- i calJac3.chr22 C 0 C 0 s mm10.chr7 3715965 29 + 145441459 CCCAACCCAGTAAACAGCTCTGCT-ACAGT i mm10.chr7 I 2 C 0 s canFam3.chr1 19704248 30 - 122678785 TCCATCCCAGCCCCGTGCTCTTGTGGGCAC i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60145665 80755 + 64156825 T a score=42523.000000 s hg38.chr19_GL949747v2_alt 195458 23 + 729520 CTGGGCCTGAGCTGA-----GCCTTTGA s panTro4.chr19 59127224 23 + 63644993 CTGGGCTTGAGCTGA-----GCCTTTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56010087 23 + 60714840 CAGGGCCTGAGCTGA-----GCCTTTGA i ponAbe2.chr19 I 4269 C 0 s nomLeu3.chr10 102788240 23 - 106955855 CTGGGCCTGAGCTGA-----GCCTTTGA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55136613 22 + 59248254 -AGGGTCCGAGCTGA-----GCCTTTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47249703 22 + 51301725 -AGGACCTGAGCTGA-----GCCTTTGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46891744 22 + 50890351 -CGGGCCGGAGCTGA-----GCCTTTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45479087 23 + 49145316 CAGGGCCTGAGCTGA-----GCCTTTGT i calJac3.chr22 C 0 C 0 s mm10.chr7 3715994 15 + 145441459 -----ATGGAAGTGA--------TTCAT i mm10.chr7 C 0 C 0 s canFam3.chr1 19704278 28 - 122678785 AGGGCCCTGAGGACAATGTGGCATATGA i canFam3.chr1 C 0 I 10229 e rheMac3.chr19 60145665 80755 + 64156825 T a score=434851.000000 s hg38.chr19_GL949747v2_alt 195481 151 + 729520 GCTCAGAGAGGACGGGGTCAGCGCC--CTCACCTGAGACCACGAGCTCCAGGGGCTCACTGGGGTGAGACAGCAGGTGGGGGTTGGAGCTGTATGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACTCATGGGGAATTC s panTro4.chr19 59127247 151 + 63644993 GCTCAGAGAGGACCGGGTCAGGGCA--GTCACCTGAGACCATGAGTTCCAGGGGGTCACTGGGGAAAGACAGCAGGTAGGGGTCGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCGTGTGGGCTGAGATCACAGGACTCACGGGGAATTC i panTro4.chr19 C 0 I 81433 s ponAbe2.chr19 56010110 151 + 60714840 GCTCAGAGAGGACAGGGTCAAGGCC--CCCACCTGAGACCACGAGCTCCAGGGGGTCACTGGGGTGAGTCAGCAGGTAGGGGTTGGAGCTGAGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACCCATGGGGAATTC i ponAbe2.chr19 C 0 I 21383 s nomLeu3.chr10 102788263 151 - 106955855 GCTCAGAGAGGACAGGGTCGGGGCT--GTCACCTGAGACCACGAGCTCCAGGGGGTCACTGGGGAGAGACAGCAGGTGGGGGTTGGAGCGGAGTGAGCTGTAGCACCTGTACGTCCCTGTGTGAGCTGAGGTTACAGGACTCATGTGGAATTC i nomLeu3.chr10 C 0 I 37927 s macFas5.chr19 55136635 151 + 59248254 GCTCGGACAGAACAGGGTCAGGGTC--CTCACCTGAGACCACGAGCTCCAGGGGGTAACTAGGGCTTGACAGCAGGTAGGGGTAGGACCTGATTGCGCTGTAGCATCGGTAGGTTCCACCCTGGGCTGAGGTCACAGGACTCATGGAGAATTC i macFas5.chr19 C 0 I 44127 s papAnu2.chr19 47249725 151 + 51301725 GTTCAGAGAGGACAGGGTCAGGGCC--CTCACCTGAGACCACGAGCTCCAGGGGCTCACTGGGGTGAGTCAGGAGGTAGGGGTTGGAGCTGAATGAGCCATAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACCCATGGGAAATTC i papAnu2.chr19 C 0 I 38303 s chlSab2.chr6 46891766 151 + 50890351 GCTCAGAGGGGACAGGATCAGGGCC--CTCACCTGAGACCATGAGCTCCAGGGGGTCACTGGGGAGAGACAGCAGGTGGGGGCTGTAGCTGTGTGAGCCGTAGCACCTGTAGGTCCCTGTGTGGACTGAGGTCACAGGACCCATGGGGAATTC i chlSab2.chr6 C 0 I 89416 s calJac3.chr22 45479110 151 + 49145316 GCTTAGAGAGAACAGGGTCAGGGCC--CTCACCTGAGACCACCAGCTCCAGGGGGTCACTGGGGAGGGACAGCAGGTAGGCGTTGGATCTGTGTGAGCTGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTTACAGGACTCATGGGGAATTC i calJac3.chr22 C 0 I 29820 s mm10.chr7 3716009 145 + 145441459 GCT--GAGAAGTCAGGATCA----C--CTCACCTGAGACTGTGAGCTCCACAGGGGCACTGGCAGATGACAAGAGGTAGAAAGATGAGTCTTGAGCTCCATAGCACCTGTAGGTGCCTGAGAGATGGGAGGTCACAGCACTCATGGAGAATTC i mm10.chr7 C 0 N 0 s canFam3.chr1 102784531 153 + 122678785 ACATGGAGGGGACAGGGGCAAGGGCTACTCACCTGAGACCAGGATCTCCACGGGGACACTGGGGTATGACAACAGGTAGGGAGAGGTTTTGATAGAGCCGTAGCACCTGTAGGTCCCCCCATGGGCTGGGGTCACAGGACTCATGGAGAATTC i canFam3.chr1 n 10229 T 11972 e rheMac3.chr19 60145665 80755 + 64156825 T a score=0.000000 s hg38.chr19_GL949747v2_alt 195632 61000 + 729520 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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e canFam3.chr1 102784684 11972 + 122678785 T e ponAbe2.chr19 56010261 21383 + 60714840 I e calJac3.chr22 45479261 29820 + 49145316 I e nomLeu3.chr10 102788414 37927 - 106955855 I e chlSab2.chr6 46891917 89416 + 50890351 I e papAnu2.chr19 47249876 38303 + 51301725 I e macFas5.chr19 55136786 44127 + 59248254 I e rheMac3.chr19 60145665 80755 + 64156825 T e panTro4.chr19 59127398 81433 + 63644993 I a score=338.000000 s hg38.chr19_GL949747v2_alt 256632 2 + 729520 ga s macFas5.chr19 55180913 2 + 59248254 gg i macFas5.chr19 I 44127 C 0 s papAnu2.chr19 47288179 2 + 51301725 GG i papAnu2.chr19 I 38303 C 0 e canFam3.chr1 102784684 11972 + 122678785 T e ponAbe2.chr19 56010261 21383 + 60714840 I e calJac3.chr22 45479261 29820 + 49145316 I e nomLeu3.chr10 102788414 37927 - 106955855 I e chlSab2.chr6 46891917 89416 + 50890351 I e rheMac3.chr19 60145665 80755 + 64156825 T e panTro4.chr19 59127398 81433 + 63644993 I a score=5688.000000 s hg38.chr19_GL949747v2_alt 256634 8 + 729520 attccaag s panTro4.chr19 59208831 8 + 63644993 attccaaa i panTro4.chr19 I 81433 C 0 s ponAbe2.chr19 56031644 8 + 60714840 attccaaa i ponAbe2.chr19 I 21383 C 0 s macFas5.chr19 55180915 8 + 59248254 attccata i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47288181 8 + 51301725 ATTCCAta i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102784684 11972 + 122678785 T e calJac3.chr22 45479261 29820 + 49145316 I e nomLeu3.chr10 102788414 37927 - 106955855 I e chlSab2.chr6 46891917 89416 + 50890351 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=1586306.000000 s hg38.chr19_GL949747v2_alt 256642 1298 + 729520 gaaagaagcactaaacaccagggtgttcatagagcatttattagggggacctctgcacagtgggGCATCCTTGTCTTCTTGCCCAGTGTCTCCTTGTGGATCTCAAGGATGTGCTTCCACATAGCAGCATGTTCTTCAGATGGACAAGGAGACACTGGGTATTCTATCCAAAGCTTTAACCTAAAATAAAAACAAAACCAAAAATAAACCCCTAGAAAATATGATCTCTCAGTAcagttgtttcttgggatacacaggcaattcgtttcagtaccccctacatgtaccaacacttgctcgtactccagccctgacgttgtctctgctgggtctgcatataggaaaagtctgccgttcatatacgcaagtcttgtttctcacaaatgctatagttttgatccccgtttgtttggaaaaagtgtgcatataagagacccctggaattcaaggctgcattgctccagggttgcctgGATTTtgagtttatttgggagtgagaagcaaggattacaatatggagtgcatggcatggcaagccacagtgtgtccagagagggaagtgtgatgttgtgatatatgctggttttcacccgcagttcctggcttgtaactcccatagcccttgttatagtcttttgttataacattggctgtgctgggcctcaggggaggcctctgacctcctcctgcccttccttcacctaacccaaagtaagactcgaatgttccctgcctttctgatagtggatcttaagaccctcccagaagacagtctcaccctgttccttgtgggaggaaatgctgATGTCatgaagctttcataaaagccccagaggactgggtttcatgagtttctgggtggctgagcatgctaaggctcctggagggcgacgcccagggagggtatggaagccccgggcctcttcccccatgcctcctcctatgagtttcttcatctgtgtcctctgcagtgtgctttgtattcaaccaggaaatgtcagtgtttcc-tgagttctgtgagctgctacagcaaattaatcaaacccaaagagtggggcatgggatccccaacttgaagccagtcagtcagaagttctggaggtctggacttgggaatggtgttgggggcagttttggggaatgggccttcaatctgtgggatccgggactgtctctgggtagacagcaccagagctgacttagaggacacccagctgctgttcgctactgcgtct-gggg--aaaaaaaccccatacatctggtcctagaagtctttttctgtgttgatgattcctgtgac s panTro4.chr19 59208839 1294 + 63644993 gaaagaagcactaaacaccagggtgttcatagagcatttattagggggacctctgcacagtgggGCGTCCTTGTCTTCTTGCCCAGTGTCTCCTTGTGGATCTCAAGGATGTGCTTCCACATAGCAGCATGTTTTTCAGATGGACAAGGAGACACTGGGTATTCTATCCAAAGCTTTAACCTAAAATAAAAACAAAACCAAAAATAAACCCCTAGAGAATATGATCTCTCAGTAcagttgtttcttgggatacacaggcaattcatttcagtaccccctacatgtaccaacacttgcttgtactccagccctgacattgtctctgctgggcctgcatataggaaaagtctgccgttcatattcacaagtcttgcttctcacaaatgcaatagttttgatccccgtttgtttggaaaaagtgtgcatataagagacccctggaattcaaggctgcattgctccagggttgcctgGATTTtgagtttatttgggagtgagaagcaaggattacaatatggagtgcatggca-----agccacagtgtgtccagagagggaagtgtgatgttgtgatatatgctggttttcacctgcggttcctggctcgtaactcccatagcccttgttacagtcttttgttataacattggctgtgctgggcctcaggggaggcctctgacctcctcctgcccttacttcacctgacccaaagtaagactcgaatgttccctgcctttctgatagtggatcttaagaccctcccagaagacagtctcaccctgttccttgtgggaggaaatgctgATGTCatgaagctttcataaaagccccagaggactgggtttcatgagtttctggatggctgagcatgcgaaggctcctggagggcgatgcccagggagggtgtggaagccccgtgcctcttcccccatgcctcctcctatgagtttcttcatctgtgtcctctgcagtgtgctttgtattcaaccaggaaatgtcagtgtttccctgagttctgtgagctgctacagcaaattaatcaaacccaaagagtggggcatgggatccccaacttgaagccagtcagtcagaagttctggaggtctggacttgggaatggtgtggggggcagtcttggggaatgggcctttaatatgtgggatccgggactgtctctgggtagacagtgccagagctgacttagaggacacccagctgctgttcgctactgcgtct-gggg--aaaaaaaccccatacatctggtcctagaagtctttttctgtgttgatgattcctgtgat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56031652 1293 + 60714840 gaaagaagcactaaacaccagggtgtgcatagagcatttattagggggacttccacagagtgggGCGCCCTCGTCTCCTTGCCGAGTGTCTGTTTGTGGATCTCAAGGATGTGCTTCCTCATAGCAGCATGTTTTTCAGATGGACAAGGAGACACTTGGTGTTCTACCCAAAGCTTTAACCTAAAATAAAAACAAaaacaaaaataaacccctagagaatatgatctctcagtacagttgtttcttgggatacacaggcaattcgtttcagtaccccctacatgtaccaacacctgctcgtcctccagccctgacattgtctctgctgggcctgcatataggaaaagtctgccgttcatatacgcaaatcttgcatcccacaaatgcaatagttttgatccccgtttggttgaaaaaagtgtgcacataagagaccccaggaattcaaggctgcgttgctccaaggttgcctggatttcgagtgtatttgggagtgagaagcaaggattacaatctggagtgcatggcatggcaagccacagtgtgtccgaagagggaagtgtga---tgtgatacacactggttttcacccttggttcctggctcacaact-ccatagcccttgttatagtcttttgttataacattggctgtgctgggcctcaggggaggcctctgacctcctcctgcccttccttcacctg-cccaaggcaagactcgaatg-tccctgcctttctgatggtggctcttaagaccctcccagaacacggtctcagcctgttccttgtgggaggaaatgctgacatcatgaagc-ttcataaaaacccaagaggactgggtttcatgggtttctggatggctgagcatgcggaggctcctggagggcgacgcccagggaaggtatggaagccccgcgccccttcccccatgcctccttctatgagtctcttcttctgtgtcctctgcagtgtgctttgtattcaaccaggaaatgtcagtgtttccctgagttctgtgagctgctacagcaaattaatcaaacccaaagagtggggcatgggatccccaacttgaagccggtcagtcagaagttctggaggtctggacttgggaatggtgtggggggcaatcttagggaatgaaccttcaatctatgggatccgggactgtgtctgggtagacagcgtcagagctgacttagaggacacccagctgctgttcgctactgggtctggggg--aaaaaaaccccacatatctggtcctagaagtattcttctgtgttgatgattcctgtgat i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55180923 1294 + 59248254 gaaagaagcactaaacaccagggtgttcatagagcatttattagggggacttccatagagtgggGCGTCCTTGTCTCCTTGCCCAGTGTCTCCTTGTGGATCTCAAGGATGTGCTTCCACATAGCAGCATGTTCTTCAGATGGACAAGGAGACACTGGATGTTCTATCCAAAGCTTTAACCTAAAATAAAAATAAAAACAAAAATAAACCCCTAGAGAATATGATCTCTCAGTACAGTTGTTTCTTGGGATACACAGGCAATTCATTTCAGTACCCGCTACGTGTAACAAAACTCACTGGTACTCCAGCCCTGACATTGTCTCTGCTGGACCTGCATATAGGAAAAGCCCGCTGTTCATATACGCAAGTCTTGCTTCTCACAAATGCAATAGTTCTGATCCCCATTTGTTTGAAAACAGTGTGCACATAAGAGACCCCAGGAATTCAAGGTTGCCTTGCTCCAAGGTTGCCTGGAGTTtgagtgtatttgggagtgagaagtaaggattacaatctggagtgcatggcatggcaagccacagtgcatccggggaggaaagtgtgatgttggcatatatgctggttttcacccgcggttcctggttcataactcccatagcgcttgttacagtctttcgttagaatgttggctgttttgggcct-a-ggggggcctctga---cctcctgcccttccttcacctg-cccaaggcaagacttgaatgttccctgcctttctgatggtagctcttgagacccctctagaagatggtctcaccctgttccttgtgggaggaaatgctgACATCatgaagcttccataaaagcccaagaggactgggtttcatgagtttctggatggctgagc-tgtggaagctcctggagggtggcgtccagggagggcatggaagccccgcgccccttcccccgtgcctcctgctatgtgtctcttcatctgtgtcctctgcagtgtgctttgtattcaaccaggaaatgtcagtctttccctgagttctgtgagctgctacagcaaattattcaagcccaaagagggggtcatgggatccccaacttgaagccagtcgatcagaagttctggaggtctgcacttgggaatggtgtgggggacagtcttggggacttagcctttaatctgtgagatgtgggactgtctctgggtagacagcgtcagagttgacttagaggacacccagctacagttcgctactgggtct-gggggaaaaaaaatcccacacatctggtcctagacgtcttcttctgtgttgatgattcctgtgat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47288189 1297 + 51301725 gaaagaagcactaaacaccAGGGTGTTCACAGAGCATTTATTAGGGGGACTTCCATAGAGTGGGGCATCCTTGTCTCCTTGCCCAGTGTCTCCTTGAGGATCTCAAGGATGTGCTTCCACATAGCAGCATGTTCTTCAGATGGACAAGGAGACACTGGCTGTTCTATCCAAAGctttaacctaaaataaaaataaacacaaaaataaacccCTAGAGAATATGATCTCTCAGTACAGTTGTTTCTTGGGATACACAGGCAACTCATTTCAGTACCCCCTACACTTAACAAAACTCGCTGGTACTCCAGCCCTGACATTGTCTCTGCTGGACCTGCATATAGGAAAAGCCTGCTGTTCATATACACAAGTTTTGCTTCTCACAAATGCTATAGTTTTGATCCCCGTTGGTTTGAAAAAAGTGTGCACATAAGAGACCCCATGAATTCAAGGTTGCATTGCTCCAGGGGTGCCTGGATTTTAAGTGTATTTGAGAATGAGAAGCAGGGATTATAATCTGGAGTGCATGGCATGGCAAGCCACAGTGCATCCAGGGAGGGAAGTGTGATGTTGGGATATATGCTGGTTTTCACCCGCAGTTCCTGGTTCATAACTCCCACAGTGcttgttacagtcttttgttaGAATGTTCACTGTGTTGGGCCT-AgggggggCCTCTGAcctcctcctgcccttccttCACCTG-CTCAAGGCAAGACTGGAATGTTCCCTGCCTTTCTGATGGTGGCTCTTAAGACCCATCTAGAAGATGGTCTCACCCTGTTCCTTGTGGGAGGAAATGCTGAcatcatgaagcttccataaaagcCCAAGAGGATTGGGTTTCATGAGTTTCTGGATGGCTGAGCATGTGGAAGCTCCTGGAGGGTGGCgtccagggagggcatggaagcccCGTGCCCCTTCCCCCATGCCTCCTGCTATGTGTCTCTTCATCTGTGTCCTCTGCAGTGTGCTTTGTATTCAACCAGGAAATGTCAGtgttt--ctgagttctgtgagctgctacAGCAAATTTatcaaacccaaagagggggtcatgggatccccaacttgaagccagtcGATCAGAAGTTCTGGAGGTCTGCACTTGGGAATGGTGTGGGGGACAGTCTTGGGGACTTAGCCTTTAATCTGTGGGATGTGGGACTGTCTCTGGGTAGACAGCGTCAGAGCTGActtagaggacacccagctgcTGTTCGCTACTgggtct-ggggaaaaaaaaatcccacacatCTGGTCCTAGAAGTCttcttctgtgttgatgattCCTGTGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46981333 1297 + 50890351 gaaagaagcactaaacaccagggtgtccatagagaatttattaggggaacttccatagagtgggGCATCCTTGTCTCCTTGCCCAGTGTCTCCTTGTGGATCTCAAGGATGTGCTTCCACATAGCAGCATGTTCTTCAGATGGACAAGGAGACACTGGGTGTTCTATCCAAAGCTTTAACCTAAAATAAAAATAAACACAATAATAAACCCCTAGAGAATATGATCTCTCAGTCCAGTTGTTTCTTGGGATACACAGGCAACTCATTTCAGTACCCCCTACACATAACAAAACTTGCTGGTACTCCAGCCCTGACATTGTCTCTGCTGGACCTGCATATAGGAAAAGCCCGCTGTTCATATACGCAAGTCTTACTTCTCACAAATGCAATAGTTCTGATCCCCATTTGTTTGAAAACAGTGTGCACATAAGAGACCCCAAGAATTCAAGGTTGCATTGCTCCAGGGCTGCCTGGATTTtgagtgtatttgggagtgagaagcaaggattacaatctggagtgcatggcatggcaagccacagtgcatgcggggagggaagtgtgatgttgggatatatgctggttttcacccgcggttcctggttcataactcccatagcgcttgttacagtatttcgttagaatgttggctgtgttgggcct-aggggaggcctctgacctcctcctgcccatccttcacctg-cccaaggcaagacttgaatgttccctgcctttctgatggtggctcttgagacccatctagaagatggtctcaccctgttccttgtgggaggaaatgctgACATCatgaaacttccataaaagcgcaagaggactgggtttcatgagtttctggatggctgagcatgtggaagcgcctggagggtggcgcccagggagggcatggaagccccgcgccccttcccccatgcctcctcctctgtgtctctttatctgtgtcctctgcagtgtgctttgtattcaaccgggaaatgtccatgttt--ctgagttctgtgagctgctacaggaaattaatcaaacccaaagagggggtcatgggatccccaacttgaagccagtcgatcagaagttctggaggtctgcacgtgggaaagatgtgggggacagtcttggggacttaacctttaatctgtgggatgtgggactgtgtctgggtagacagcgtcagagttgacttagaggacacccagctgctgttcgctactgggtct-ggggaaaaaaaaatcccacacatctggtcctagaagtcttcttctgtgttgatgattcctgtgat i chlSab2.chr6 I 89416 C 0 e canFam3.chr1 102784684 11972 + 122678785 T e calJac3.chr22 45479261 29820 + 49145316 I e nomLeu3.chr10 102788414 37927 - 106955855 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=26727.000000 s hg38.chr19_GL949747v2_alt 257940 14 + 729520 gtgagagtagagga s panTro4.chr19 59210133 14 + 63644993 gtgagagtagagga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56032945 14 + 60714840 gtgagagtagagga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102826341 14 - 106955855 GTGAGAGTAGAGGA i nomLeu3.chr10 I 37927 C 0 s macFas5.chr19 55182217 14 + 59248254 gtgagagtagagga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47289486 14 + 51301725 GTGACAGTAGAGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46982630 14 + 50890351 gtgagagtagagga i chlSab2.chr6 C 0 I 33 e canFam3.chr1 102784684 11972 + 122678785 T e calJac3.chr22 45479261 29820 + 49145316 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=347900.000000 s hg38.chr19_GL949747v2_alt 257954 292 + 729520 aaagcaccgtagagagagctctctgtacatagagaggtaaaggaagttcttatcagcaacaagggagagcctgacagagctgcctggaaacagagttccctggttccacaggttcaaagccagagttgctgtcagtccattggaggagatgctgttgctggtcaatggttctcttgagagcatcttatctgaattcctgacgtcctaaagaaCATCTAGTGATAAACCTTGTCAAAGCAGAA-GGGGCTGAAGGACATGGAAGAGtttcttatgggttttt-----taaaagtcctta s panTro4.chr19 59210147 292 + 63644993 aaagcaccgtagagagCGCTCtctgtacatagagaggtaaaggaagttcttatcagcaacaagggagagcctgacagagctgcctggaaacagagttccctggttccacaggttcaaagtgagagttgctgtcagtccattgaaggagatgctgttgctggtcaatggttctcttgagagcatcttatctgaattcctgacgtcctaaagaatatctagtgataaaccttgtcaaagcagga-ggggctgaaggacatggaagagtttcttatgggttttt-----taaaagtcctta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56032959 292 + 60714840 aaagcaccgtagagagagctctctgtacatagagaggtaaaggaagttcttatcagcaacaagggagaggctgacaaacctgcttagaaacagagttccctggttccacaggttcaaagccagaggtgctgtcagtccattggaggagatgccattgctgggcaagtgttctctcgagagcatcttattggaattcctgacatcctaaagaatatctagtgataaaccttgtcaaagcagaa-gggggtgaaggacatggaagagtttcttgtaggttttt-----taaaagtcctta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102826355 288 - 106955855 AAAGCACCATAGAGAGAGCTCTCTGTACATAGAGAggtaaaggaagt-----tcagcaacaagggagaagctgacagagctgcccggaaacagagttccctggttccagaggttcaaagtcagagttgctgtcagtccattggaggagaagccgttgctgggcaagtgttctctcaagagtgtcttatctgaattcctgacgtcctaaagaaTATCTAGTGATAAACCTTGTCAAAACAGGAGGGGGGTGAAGGACATGGGAGAGtttcttatgggttttt-----taaaagtcctta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55182231 293 + 59248254 aaagcactgtagagagagctctctgtacatagagaggtaaaggaagttcttatcagcaacaagggagaggctgacag--ctgcctagaaacagagttctctggttccagaggttcaaagccagagttgctgtcagtccattggaggagatgccattgctgggcaagtgttctctcgagagcatcttacctgaattcctgacatcctaaagaaTAGCTAGTGATAAACCTTGTCAAAGCAGGAGAGGGGTGAAGGACATGGAAGTGTTTCTTGTGGGTTTTTTT---TTTAAGTCCTTA i macFas5.chr19 C 0 I 267 s papAnu2.chr19 47289500 296 + 51301725 AAAGCACTGTAGAGAGAGCTCTCTGTACGTAGAGAGGTAAAGGAAGTTCTTATCAGCAACAAGGGAGAGGGTGACAG--CTGCCTAGAAACAGAGTTCCCTGGTTCCAGGGGTTCAAAGCCAGAGTTGCTGTCAGTCCATTGGAGGAGATGCTATTGCTGGGCAAGTGTTCTCTCAAGAGCATCTTATCTGAATTCCTGACGTCCGAAAGAATAGCTAGTGATAAACCTTGTCAAAGCAGGAGAGGGGTGAAGGACATGGAAGTGTttcttgtggggttttttttatttACGTCCTTA i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102784684 11972 + 122678785 T e calJac3.chr22 45479261 29820 + 49145316 I e chlSab2.chr6 46982644 33 + 50890351 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=429970.000000 s hg38.chr19_GL949747v2_alt 258246 339 + 729520 gaaacagttcttatctgagacgtggaagcatgggcctcctctccttcaggccttcctggccctgtggggtctgagtttgaccaaagtcatctcatccttgcacctgtaactttTCTATTGGGAgtctgcagtgaagggatggggttacgaagtttaacctgagagtttcaggaatttggttcaggggagggcttgtttctacacttttagcaaaagggttaatttttcagtgttttctagaaacaacctaaagtgctttatcagtacttggggatgctcaagacctcagcttgggttccagcctgcaggtggaaacatgcatctg-tccaacccacagaa s panTro4.chr19 59210439 339 + 63644993 gaaacagttcttatctgagacgtggaagcatgggcctcctctccttcaggccttcctggccctgtggggtctgagtttgaccaaagtcatctcatccttgcacctgtaactttcCTCTTGGGAgtctgcagtgaagggatggggttacgaagtttaacctgagagtttcaggaatttggttcaggggagggcttgtttctacacttttagcaaaagggttaatttttcagtgttttctagaaacaacctaaagtgctttatcagtacttggggatgctgaagacctcagcttgggttccagcctgcaggtggaaacatgcatctg-tccaacccacagaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56033251 338 + 60714840 gaaacagttcttatctgagagctggaagcat-ggcctcgtctccttcaggccttcttggccctgtgtggtctgagtttgaccaaagtcatctcatccttgcacctgtgactttcCTATTGGGAgtctgcagtgaagggattgggttatgaagtttaacctgagaatttcaggaatttggttcaggggagggattgtttctacacttttagcaaaacggttaatttttcagtgttttctagaaacaacctaaagtgctttatcagtacttggggatgctcaagacctcagcttgggttccagcctgcaggtgaaaacatgcatctg-tccagcccacagag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102826643 340 - 106955855 gaaacagttcttatctgagatgtggaagcatgggcctcctctccttcaggcctttctggccctgtggggtctgagtttgaccaaagtcatctcatccttgcacctgtgactttcCTATTGGGAgtctgcagtgaagggatggggttacgaagtttaacctgacagtttcaggaatttggttcaggggagggcttgtttccacacttttagcaaaagggttaatttttcagtgttttctagaaacaacctaaagtgctttatcagtacttggggatgctcaagacctcagcttgggttccagcctgcaggtggaaacatgcatctgttccaacccacagaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55182791 339 + 59248254 gaaacagttcttatctgagacctggaagcatgagcgtcttctccttcaggcctttctggccctgtggggtgtgagtttgaccaaagtcatctcatccttgcacctgtgactttcCTATTGGGtgtctgcagtgaaggcactgggttacgaagtttaacctgagagtttcaggaatttggttgaggggagggctcgtttctatatttttagcaaaagggttaatttttcagtgttttctagaaacaacctaaagtgctttatgagtacttggggatgctcaagacctccgcttgggttccagcctgcaggtggaaacaggcatctg-tccaacccacagag i macFas5.chr19 I 267 C 0 s papAnu2.chr19 47289796 338 + 51301725 GAATCAGTTCTTATCTGAGACCTGGAAGCATGAGCCCCCTCTCCTTCAGGCCTTTCTGGCCCTATAGGGTCTGAGTTTGACCAAAGTCATC-CATCCTTGCTCCTGTGACTTTCCTATTGGATGTCTGCAGTGAAGGCACTGGGTTACGAAGTTTAACCTGAGAGTTTCAGGAATTTGGTTGAGGGTAGTgcttgtttctatatttttagcaAAAGGGTTAATTTTTCAGCGTTTTCTAGAAACAACCTAAAGTGTTTTATCAGTATTTGGGGATGCTCAAGACCTCCGCTTGGGTTCCAGCCTGCAGGTGGAAACAGGCATCTG-TCCAACCCACAGAG i papAnu2.chr19 C 0 I 326 e canFam3.chr1 102784684 11972 + 122678785 T e calJac3.chr22 45479261 29820 + 49145316 I e chlSab2.chr6 46982644 33 + 50890351 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=544961.000000 s hg38.chr19_GL949747v2_alt 258585 443 + 729520 cagtcatggccctttgtctcactctcagaacaaggaaaaaagtggaggaaactgtgggaccttaGAGACTGTGACTCCCCCTCTTCTGTGTTTGTGGACAGACCCTGGGATGACTCAGTGACCCGGGCTACACTCAGCACTGAGCCAC---CTTCCCGGGTGTGCATGACACAGATGCGCTTTATCATTGTTGGACCGGGCATCTCTGACCCTGGAGTGTGAGGCTCACATGGACCCCGCCATGCCGGGCATAACACAGAGGTGATTCTAAGCTTGGGAGCATGGACACCGCAGGGCAGGAGCGGCTACAGCAATGCCCTCATCAGCTTTCCTTCCTGAGTCAGCCTGGGGAGAAACCCTATATGGAAGATCAGGTGTG-TGGGAGAAAAACCCACCCCAGAGGAATAAAAATCAaagagtccgttagag-aaaaaacaggcaattgt s panTro4.chr19 59210778 443 + 63644993 cagtcatggccctttgtctcactctcagaacaaggaaaaaagtggaggaaactgtgggaccttaGAGACTGTGACTCCCCCTCTTCTGTGTTTGTGGACAGACCCTGGGATGACTCAGTGACCCCGGCCACACTTAGCACTGAGCCAC---CTTCCCGGGTGTGCATGACACAGATGCGCTTTATCATTGTTGGACCGGGCATCTCTGACCCTTGAGTGTGAGGCTCGCATGGACCCCGCCATGCTGGGCATAACACAGAGGTGATTCTAAGCTTGGGAGCATGGACACCGCAGGGCAGGAGCGGCTACAGCAATGCCCTCATCAGCTTTCCTTCCTGAGTCAGCCCTGGGAGAAACCCTATATGGAAGATCAGGTGTG-TGGGAGAAAAACCCACCCCAGAGGAATGAAAATCAaagagtccattagag-aaaaaacaggcaattgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56033589 446 + 60714840 cagtcatgcccctttgtctctctctcagaacaaggaaaaaagtggaggaaattgtgggaccctaGAGACTGTGACTCCCCCACTTCTGTGTTTGTGGACAGACCCTGGGATGACTCAGTGACCCTGGCCACACTCAGCACTGAGCCACTTTCTTCCTGGGTGTGCATGACACAGATGCGCTTTATCACTGCTGGACCGGGCATATCTGATCCTTGAGTGTGAGGCTCACATGGACCCCACCATGCTGGGCATAACACAGAGGTGATTCTAAGCTTGGGAGCATGGGCACCGCAGGGCAGGAGCGGCTACAGCAATGCCCTCATCAGCTTTCCTTCCTGAGTCAGCCCTGGGAGAAACCCTGTATGGAAGATCAGGTGTG-TGGGAGAAAATCTCACCCCAGAGGAATAAAAATCAAAGAGTCCGTTAGAG-aaaaaacaggcaattgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102826983 444 - 106955855 cagtcatggccctttgtctttctctcagaacgaggaaaaaagtggaggaaactgtgggaccttaGAGACTGTGACTCCCCCTCTTCTGTGTTTGTAGACAGACCCTGGGATGACTCAGTGACCCTGGCCACACTCAGCACTGAACCAC---CTTCCTGGGTGTTCATGACACAGATGCGCTTTATCATTGTTGGACCGGGCATATCTGACCCTTGAGTGTGAGGCTCACATGGACCCCGCCATGCCAGGCATAACACAGAGGTGATTCTAAGCTTGGGAGCGTGGACGCCGCAGGGCAGGAGCAGCTACAGCAATGCCCTCATCAGCTTTCCTTCTTGAATCAGCCCTGGGAGAAACCCTGCATGGAAGATCAGGTGTG-TGGGAGACAAACCCACCCCAGAGGAATAAAAATCAAAGAGTCCGTTAGagaaaaaaacaggcaattgt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55183130 444 + 59248254 cagtcgtggcactttctctctctctcagaacaaggaaaaaagtggaggaaactgtgggaccttaGAGACTGTGGCTCTCCGTCTTTTGTGTTTGTGGACAGACCCTGGGATAACTCAGTGACCCAGGCCACACTCAACACTGAGCCAC---CTTCCTGGGTGCACACGACACAGACTTGCTTTATCATTGTTGGACTGGGCGTATCTGGCACTTGAGTGTGAAGGTCACATGGACCTCGCCATGCTGGGCATAACAAGGAACTGATTCAAAACTTGGGAGTGTGGACACTGCAGGGCAGGAGTGGCTACAGGAATGCCCTCATCAGTTTTCATTCCTGAGTCAGTCCTGGGAGAAACCCTGTATGGAAGATCATGTGTGTTGGGAGAAAAACCCACCCCCGAGGAataaaaatcaaacagtccattagag-aaaaaacaggcaactat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47290460 443 + 51301725 cagtcatggcactttctctctctctcagaacaAGGAAAAAAGTGGAGGAAACTGTGGGACCCTAGAGACTGTGGCTCTCCGTCTTTTGTGTTTGTGGACAGACCCTGGGATAACTCAGTGACCCAGGCCACACTCAACACTGAGCCAC---CTTCCCGGGTGCACACGACACAGACTTGCTTTATCATTGTTGGACCAGGTGTATCTGGCACTTGAGTGTGAAGGTCACACAGACCCCGCCATGCTGGGCATAACACGGAGCTGATTCTAAACTTGGGAGCGTGGACACCGCAGGGCAGGAGTGGCTACAGGAATGCCCTTATCAGTTTTCATTCCTGAGTCAGCCCTGGGAGAAACCCTGTATGGAAGATCATGTATG-TGGGAGAAAAACCCACCCCAGAGGAATAAAAATCAAACCGTCCATTAGAG-AAAAAACAGGCAATTAT i papAnu2.chr19 I 326 C 0 e canFam3.chr1 102784684 11972 + 122678785 T e calJac3.chr22 45479261 29820 + 49145316 I e chlSab2.chr6 46982644 33 + 50890351 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=596467.000000 s hg38.chr19_GL949747v2_alt 259028 337 + 729520 agaaatgaattaggaagctattgtgatgtg-aaaatagtaaattatattaacacatttagaaataatttcatccagaacaagacacagctgaaatgataaacattgtattggtgtagaatatttactaaaatttttcattagtcatcagagaaaaactagaaatgaaaaaaatagaaaagataattaatgcacacaagaaatggaatgaaaagaggaaacagatatctctctttggatcacactttcagaatgaaggaaataaggagtatgttattcagtaaatacttgcaaagaaaatggttgacatttttatagaaatgaagaaagaacatgagtt s panTro4.chr19 59211221 336 + 63644993 agaaatgaattaggaagctattgtgatgtg-aaaatagtaaattatattaacacatttagaaataatttcatccagaacaagacacagctgaaatgataaacattgtattggtgtagaatatttatt-aaatttttcattagtcatcggagaaaaactagaaatgaaaaaaatagaaaagataattaatgcacacaagaaatggaatgagaagaggaaacagatatctctctttggatcacaccttcagaatgaaggaaataaggagtatgttattcagtaaatacttgcaaagaaaatggttgacatttttatagaaatgaagaaagaacatgagtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56034035 337 + 60714840 agaaatgaattaggaagctattgtgatgtg-aaaatagtaaattatattaacacatttagaaataatttcatccagaacgagacacagctgaaatgataaatattgtattggtgtagaatatttattaaaattttccattagtcatcagagaaaaactagaaatgaaaaaaatagaaaagataattaatgcacacaagaaatggaatgagaagaggaaacagatatctctctttggatcacactttcagaatgaaggaaataaggagtatgttattcagtaaatacttgcaaagaaaatggttgacatttttatagaaatgaagaaagaACATGAGTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102827427 337 - 106955855 agaaatgaattaggaagctattgtgatgtg-aaaatagtaaattatattaacacatttagaaataatttcatccagaatgagacacagctgaaatgataaacattgtattggtgtagaatatttattaaaatttttcattagtcatcagagaaaaactagaaatgaaaaaaatagaaaagataattaatgcacacaagaaatggaatgagaagaggaaacagatatctctctttggatcacactttcagaatgaaggaaataaggagtatgttattcagtaaatacttgcaaagaaaatggttgacatttttatagaaatgaagaaagaacatgagtT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55183574 333 + 59248254 agaaatgaattaggaagctattgtgatgtgaaaaatagtaaattatattaacacagttagaaataatttcatcaagaatgagacacagctgaaacaataaacattgtattggtgtagaatatttattaaaatttttcattagtcatcagagaaaaactagaaat-aaaaaaatagaaaagataattaatgcacacaagaaatggaatgagaagaggaaacagatatctctctatagatcacactttcagaatgagggaaataaggagtatgtt----agtaaatacttgcaaagaaataagttgacatttttacagaaatgaagaaagaacatgagtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47290903 334 + 51301725 AGAAATGAATTAGGAAGCTATTGTGATGTGAAAAATAGTAAATTATGTTAACACAGTTAGAAACAATTTCATCAAGAATGAGACACGGCTGAAACAATAAACATTGTATTGGTgtagaatatttattaaaatttttcactagtcatcagagaaaaactagaaatgaaaaaaatagaaacaataattaATGCACACAAGAAATGGaatgagaagaggaaacagaTATCTCTCTATAGATCACACTTTCAGAATGAGGGAAATAAGGAGTATGTT----AGTAAATACTTGCAAAGAAATAAGTTGACATttttacagaaatgaagaaagaacatgAGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46982677 337 + 50890351 agaaatgaattaggaagctattgtgatgtgaaaaattataaattatattaacacagttagaaataatttcatcaagaatgagacacagctgaaacaataaatatcgtattggtgtagaatatttattaaaatttttcatcagtcatcagagaaaaactagaaat-gaaaaaatagaaaagataattaatgcacacaagaaatggaatgagaagaggaagcagatatctctctatagatcacactttcagaatgagggaaataaggagtatgttagtgagtaaatacttgcagagaaataagttgacatttttacagaaatgaagaaagaacatgagtt i chlSab2.chr6 I 33 C 0 e canFam3.chr1 102784684 11972 + 122678785 T e calJac3.chr22 45479261 29820 + 49145316 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=209935.000000 s hg38.chr19_GL949747v2_alt 259365 163 + 729520 taacgtgaacaaattcataaataacatcaatgtcttaactatgatagagtaaaagatacctagaatagatacaaagtaattttaaaactactggagaaaatgaaaATTATTGTCCAATGAAAGACAAGCACATTGGGACTGGATTTCCCAAGAGTAAAAAGTG s panTro4.chr19 59211557 163 + 63644993 taacgttcacaaattcataaataacatcaatgtcttaactatgatagagtaaaagatacctagaatagatacaaagtaattttaaaactactggagaaaatgaaaattattctcaaatgaaagacaagcacattgggaccggatttcccaagcgtaaaaaGTG i panTro4.chr19 C 0 I 1 s ponAbe2.chr19 56034372 163 + 60714840 TAACGTGCACAAATTCATAAATAACATTAATGTCTTAACTATGATAGAGCAAATGATACCTAGAATAGATACAAAGTAATTTTAAAACTACTGGAGAAAATGAAAATTATTCTCAAATGAAAGACAAGCACATTGGGACCGGATTTCCCAAGAGTAAAAAGTG i ponAbe2.chr19 C 0 I 5693 s macFas5.chr19 55183907 163 + 59248254 taatgtgcataaactcataaataacattaatgtcttaactatgatagagcaaacaatacctagaatagatacaaagtaattttaaaattactggagaaaatgaaaattattctcaaatgaaagacaagcacgttgggactggatttcccaagagtaaaaaGTG i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47291237 163 + 51301725 TAATGTGCATAAACTCATAAATGACATTAATGTCTTAACTATGATAGAGCAAACAATACCTAGAATAGatacaaagtaattttaaaattactggagaaaatgaaaattattctcAAATGAAAGACAAACACATTGGGACTGGATTTCCCAAGAGTAAAAAGTG i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46983014 163 + 50890351 taatgtgcataaactcataaataacattaatgtcttaactatgatagagcgaacaatacctagaatagatacaaagtaattttaaaattactggagaaaatgaaaattattctcaaatgaaagacaagcacgttgggactggatttcccaagagtaaaaaGTG i chlSab2.chr6 C 0 I 1 e canFam3.chr1 102784684 11972 + 122678785 T e calJac3.chr22 45479261 29820 + 49145316 I e nomLeu3.chr10 102827764 0 - 106955855 C e rheMac3.chr19 60145665 80755 + 64156825 T a score=162386.000000 s hg38.chr19_GL949747v2_alt 259528 189 + 729520 CAAGAAAATGACTGGGGGCTGAggttcaagttggctgaatggaaagggctggagtctgcctactcactaagaggacccaaaatagcgagtaaataccaacaggtcaagtggatcttccaagaggatgctggggttcacctgagaaacatgaggacatggagagaagagaagagaaaaggtgggagccag s panTro4.chr19 59211721 189 + 63644993 CAAGAAAATGACTGGGGGTTGAggttgaagttggctgagtggaaagagctggagtctgcctactcactaagaggacccaaaatagtgagtaaataccaacaggtcaagtggatcttccaagaggatgctggggctcacctgagaagcaggaagacatggagagaagagaagagaaaaggtgggagccag i panTro4.chr19 I 1 C 0 s macFas5.chr19 55184071 189 + 59248254 CAAGAAAATGACTGGGGGTTGAAgttccagttggctgaatggaaagggctggagtctgcctgctcaccaagaggacccaaaatggcaagtaaataacaacaggtcaagtggatcttccaagaggatgctggggttcacctgagaaccatgaggacacgtagagaagagaagagaaaaggtgggagccag i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47291401 189 + 51301725 CAAGAAAATGACTGGGGGTTGAAGTTCCAGTTGGCTGAATGGAAAGGGCTGGAGTCTGCCTACTCACCAAGAGGACCCAAAATGGCGAGTAAATACCAACAGGTCAAGTGGATCTTCCAAGAGGACGCTGGGGTTCACCTGAGAACCATGAGGACacggagagaagagaagagaaaaggtggGAGCCAG i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46983178 189 + 50890351 CAAGAAAATGACTGGGGGTTGAAGTTCCATTtggctaaatggaaagggctggagtctgcctactcacaaagaggacccaaaatggcgagtaaataccaacaggtcaagtggatcttccaagaggacgctggggttcacctgagcaccatgaggacacagagagaagagaagagaaaaggagggagccag i chlSab2.chr6 I 1 C 0 e canFam3.chr1 102784684 11972 + 122678785 T e ponAbe2.chr19 56034535 5693 + 60714840 I e calJac3.chr22 45479261 29820 + 49145316 I e nomLeu3.chr10 102827764 0 - 106955855 C e rheMac3.chr19 60145665 80755 + 64156825 T a score=174425.000000 s hg38.chr19_GL949747v2_alt 259717 217 + 729520 gagaggctcc-taacacggggaaggggtgagtgagtgagagattcaccaacacggggaaggggtgagtgagtgagagattccccaacacggggaaggggtgagtgagtgagagGATCCCTAACACGGGGAAGGTGTGAGTGAGTgagaggatccctaacacggggaaggggtgaatgagtgagagc--------------------------------ctccctaacacagggaaggggtgagtgagtga s panTro4.chr19 59211910 215 + 63644993 gagaggctcc-taacacggggaaggggtgagtgagtgagaggctc-TTAACACAGGGAAGGGGTGAGTGAGTgagagattccctaacacggggaaggggtgagtgagtgagaggct-ccTAACACGGGGAAGGGGTGAGTGAGTgagagattccctaacacggggaaggggtgagtgagtgagaga--------------------------------ttccctaacacggggaaggggtgagtgagtga i panTro4.chr19 C 0 I 2356 s ponAbe2.chr19 56040228 217 + 60714840 gagaggctccttaacagagggaaggggtgagtgagtgagagattccctaacacggggaaggggtgagtgagtgagaggct-ccTAACACGAGGAAGGGGTGAGTGAGTgagagattccctaacagggggaaggggtgagtgagtgagaggccccCTAACACGGGGAAGGGGTGAGTAAATgagagc--------------------------------atccctaacacggggaaggggtgagtgagtga i ponAbe2.chr19 I 5693 C 0 s macFas5.chr19 55184260 177 + 59248254 gagaggctcc-taacatggggaaggggtgagagagtgagagattccctaacacggggaaagggtgagtgagtgagagattctctagcatggggaaggggtgagtgagtgagaggccTCCTAACAAGGGGAAGGG----------------------------------------GTGAGTgagagg--------------------------------ctccttaacaaagggaaagggtgagtgggtat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47291590 140 + 51301725 GAGAGGCTGC-TAACACGGGGAAGGGGTGAGTGA-TGAGAGATTCCCTAACACAGGGAAGAGGTGAGT------------------------------------GAGTGAGAGGCCCCCTAACAAGGGTAAGGG----------------------------------------GTGAGTGAGAGG--------------------------------CTCCTTAACAAAGGGAAAGGGTGAGTGGGTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46983367 248 + 50890351 gagaggctcc-taacacggggaaggggtgagtga-tgagagattccctaacatggggaagcgatgagtgagtgagagATTCCCTAACACGGGGAAGGGGTGAGAGAGTgagagattccctaacacggggaaggggtgagcaagtgagagattctctagcatggggaaggggtgagtgagtgagaggccccCTCACAAGGGGAAGGGGTGAGTgagaggctccttaacaaagcgaaagggtgagtgggtat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102784684 11972 + 122678785 T e calJac3.chr22 45479261 29820 + 49145316 I e nomLeu3.chr10 102827764 0 - 106955855 C e rheMac3.chr19 60145665 80755 + 64156825 T a score=264095.000000 s hg38.chr19_GL949747v2_alt 259934 329 + 729520 ggggtccctggcatctacacctctgctgtgggcccttaggatcctgcccacaggagagcgcctgtcccctctgggcctccagaggcccacagtttgctcctggagactgtaccaaggccccactggagcccacgtggaatcccacaggcttctgatccctgagcagcctgggtccagctgccactgccttagcagggagggaggaggccaggcacctctgtgggccccagaataagtatgacagctggggcacaggagcagccaagctgagcaccacacagctgcccacctctgttgcttcctgcgaaatggggcttccttcctgctaa s ponAbe2.chr19 56040445 329 + 60714840 gaggtccctggcatctacacctctgccgtgggctcttaggatcctgcccacaggagagcgcctgtcccctctgggcctccagaagcccacagtttgctcctggagactatatcaaggccccgctggagcccacgtggaatcccacaggcttctgatccctgagcagcctgggtccagctgccactgccttagcagggagggagggggccaggcacctctgtgggccccagaataaatatgacagctggggcacaggagcagccaagctgagcaccacacagctgtccacctcTGTTGCTTCCTGCTAAATGGGGCTTCCTTCCTGCTAA i ponAbe2.chr19 C 0 I 21 s macFas5.chr19 55184437 329 + 59248254 gaggcccctgggatccacacccctgccttggccctttacaattctggtcacaggagagcccctgaccccccttggcctgcagaggcacacagggagttcctggagatggtgcagaggcacctctggagcccacgtggagtcccacaggcttctgatccctgagcagcctgggtccagctgccactgccttagcaaggagggaggaggccaggcacctctgtgggccccagaatCAATATGACAGCTGGGGCACAGGAACAGCGAAGCTGAGCACCACACAGCTCCCCACCTCTGTTGTGTCCTGCTAAATTGGGCTTCCTTCCTGTTAA i macFas5.chr19 C 0 I 189 s papAnu2.chr19 47291730 328 + 51301725 GAGGCCCCTGGGATCCACACCCCTGCCTTGGCCCTTTACAATTCTGGTCACAGGAGAGCCCCTGACCCCGCTTGGCCTGCAGAGGCACACAGGGAGTTCCTGGAGATGGTGCAGAGGCGCCTCTGGAGCCCACGTGGAGTCCCACAGGCTTCTGATCCCTGAGCAGCCTGGGTCCAGCTGCCATTGCCttagcagggagggaggaggccagGCACCTCTGTGGGCTGCAGAATCAATATGACAGCTGGGGCACAGAAACAGCCAAGCTGAGCACCACACAGCTCCCCACCTCTGTTGTGtcctgct-aatggggcttccttcctgctaa i papAnu2.chr19 C 0 I 124 s chlSab2.chr6 46983615 329 + 50890351 gaggcccctgggatccacacccctgccttggccctttacaattctggtcacaggagagcccctgaccccccttggcctgcagaggcacacagggagttcctggagatggtgcagaggcgcctctggagcccacgtggagtcccacaggcttctgatccccgagcagcctgggttcagctgccattgccttagcagagagggaggaggccaggcacctctgtgggccccagaatcaatatgacagctggggcacaggaacagccaagctgagcaccacacagctccccacctctgttgcttcctgctaagtggggcttccttcctgttaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102784684 11972 + 122678785 T e calJac3.chr22 45479261 29820 + 49145316 I e nomLeu3.chr10 102827764 0 - 106955855 C e rheMac3.chr19 60145665 80755 + 64156825 T e panTro4.chr19 59212125 2356 + 63644993 I a score=366145.000000 s hg38.chr19_GL949747v2_alt 260263 419 + 729520 tggggcttgccagctgcagggccccagt-cacccgtcctgcccccacccgaacaccgtggccctggctcggtgccctctgaaagcccaatgctcagaggcccctgacaagccctttgcagtcactgccacctctgcctctgcccct--gctgccccaggcccagggagggtgtggggaggcctggcactttcacgtgtccccag-agcaaaaccgagtgacacttcttcaggagggaagtgtgagcgggccctgtgcctcacagctgccagtctccagtgccccagccgaggggcgctgccctccctagtgacaggcccacagcacagccaccctgcccccacctggacatttcagCTGCAGCCCCCAGCCCTTCTGAGAGCCCAGTCCCCACAGGCCTGTGATCTGCC-GCAGGCTCTACCAC s ponAbe2.chr19 56040795 418 + 60714840 TGgggcttgccagctgcagggccccagtgcacccatcctgcccccacctgaacaccgtg-ccctggctcggtgccctctgaaagcccaatgctcagaggcccctgacaagccctttgcagtcactgccacctctgcctctgcccct--gctgccccaggcctagggagggcgtggggaggcctggcactttcgtgtgtccccaacagcaaaaccgagtgacgcttcttcaggagggaagtgtgagcaggccctgtgccccacagctgccagtctccagtgccccagcagaggggccctgccctctctagtgacaggcccacagcacagccgccctgcccccacctggacatttcagCTGCAGCCCC-AGCCCTTCTGAGAGCCCAGTCCCCACGGGCCTGTGATCTGCC--CAGGCTCTACCAC i ponAbe2.chr19 I 21 M 3000 s macFas5.chr19 55184955 424 + 59248254 TCgggcttgccagctgcagggccccagtgcacccgtcctacccccacctgaataccatggccccggcttggtgccctctgaaagcccaatgctcagagacccctgacaagccctttgcagtcactgccacctctgcctctgcccctaggctgccccaggctcagggagggtgtggggaggcctggcacttttgcatgtccccaacaGCAAAACCGAGTGCCACTTTTTCAGGTGGGCAGTGTGAGCGGGCCCTGTGCCCCACAGCTGCCAGTCTCCAGTGCCCCAGCCAAGGGGCCCTGCCCTCCCTAGTGACAGGCCCACAGCACAGCCACCCTGCCCCCACCTGGACATTTCAGCTGCAGCCTCCAGCCCTTCTGAGAGCCCAGTCCCCACAGGCCTGTGATCTGCCCACGGGCTCTACCAC i macFas5.chr19 I 189 C 0 s papAnu2.chr19 47292182 424 + 51301725 TGGGGCTTGCCAGCTGCAGGGCCCCAGTGCACCCGTCCTGCCCCCACCTGAACACCGTGGCCCTGGCTTGGTGCCCTCTGAAAGCCCAATGCTCAGAGGCCCCTGACAAGCCCTTTGCagtcactgccacctctgcctctgcccctaGGCTGCCCCAGGCTCAGGGAAGGTGTGGAGAGGCCTGACACTTTCGCGTGTCCCCAACAGCAAAACCGAGTGCCACTTCTTCAGGAGGGAAGTGTGAGCAGACCCTGTGCCCCACAGCTGCCAGTCTCCAGTGCCCCAGCGGAGGGGCCCTGCCCTCCCTAGTGACAGGCCCACAGCACGGccgccctgcccccacctggccATTTTGGCTGCAGCCCTCAGCCCTTCTGAGAGCCCAGTCCCCACAGGCCTGTGATCTGCCCACGGGCTCTACCAC i papAnu2.chr19 I 124 C 0 s chlSab2.chr6 46983944 424 + 50890351 tggggcttgccagctgcagggccccagtgcacccgtcctacccccacctgaacaccgtggccctggcttggtgccctctgaaagcccaatgctcagaggcccctgacaagccctttgcagtcactgccacctctgcctctgcccctaggctgccccaggcgtagggagggTGTGGGGAGGCCTGGCACTTTTGCGTGTCCCCAACAGCAAAACCGAGTGCCACTTCTTCAGGAGGGCAGTGTGAGCAGACCCTGTGCCCCACAGCTGCCAGTCTCCAGTGCCCCAGCCAAGGGGCCCTGCCCTCCCTAGTGACAGGCCCACAGCACAGCCGCCCTGCCCCCACCTGGACATTTCAGCTGCAGCCCCCAGCCCTTCTGAGAGCCCAGTCCCCACAGGCCTGTGATCTGCCCACGGGCTCTACCAC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102784684 11972 + 122678785 T e calJac3.chr22 45479261 29820 + 49145316 I e nomLeu3.chr10 102827764 0 - 106955855 C e rheMac3.chr19 60145665 80755 + 64156825 T e panTro4.chr19 59212125 2356 + 63644993 I a score=27588.000000 s hg38.chr19_GL949747v2_alt 260682 53 + 729520 CTGAGCCTTCTGCCTGccccgcctgaaggttctgccggtgacctggggaccag s macFas5.chr19 55185379 53 + 59248254 CTGAGCcttctgcctgtcccgcctgagaattctgcctgtgacctggggaccag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47292606 53 + 51301725 CTGAGCCTTCTGCCTGTCCTGCCTGAGAATTCTGCCTGTGACCTGGGGACCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46984368 53 + 50890351 CTGAGCCTTCTGCCTGccccgcctgataattctgcctgtgacctggggaccag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102784684 11972 + 122678785 T e ponAbe2.chr19 56041213 3000 + 60714840 M e calJac3.chr22 45479261 29820 + 49145316 I e nomLeu3.chr10 102827764 0 - 106955855 C e rheMac3.chr19 60145665 80755 + 64156825 T e panTro4.chr19 59212125 2356 + 63644993 I a score=298584.000000 s hg38.chr19_GL949747v2_alt 260735 350 + 729520 cccatccctccccatcacagccagcatctgaaccccggagcagccgaaacccagtccagccccttcaggactcacacacgctgtccagccggccacctaggggcctgtgatccgggaactacctgccctttcctacc-tgctggcacctgaccactcaccccagggcctgaggtcgggcccacccagccagcaacaccaccacaactgacgtccactcTCCCATCCAGAGAGGCAGAA-GCcccacatcccacctacatgaagcagctaccgcgtcagacaacagacagccgctcagggtctgcactgggctgagggaggaggctctgccttggaaccacgcctgcagagag s panTro4.chr19 59214481 349 + 63644993 cccatccctccccatcacagccagcatctgaaccccggagcagccgaaacccagtccagccccttcaggactcacacacgctgtccagccggccacctaagggcctgcgatctgggaactacctgccctttcctaccctgctggcacctgaccactcaccccagggcctgaggtcgggcccacccagccagcaacaccaccacaactgacgtccactcTCCCATCCAGAGAGGCAGAA-GCCCCACATCCCACCTACATGAAGCAGCTACCACGTcagacaa--gacagctgctcagggtctccactgggctgagggaggaggctctgccttggaaccacgcctgcagagag i panTro4.chr19 I 2356 C 0 s macFas5.chr19 55185432 352 + 59248254 cccagccctccccatcacagccagcacctgaagcctggaacagccgaaacccagtcaagctcctacaggactcgcacacactgtccagccggccacctaggggcctgcaatccgggaactgcctgccctttcctactctgctggcacctgaccagtcaccccagggcctgaggtcgggcccacccagccggtaacaccaccacaactgacgtccactcTCCCATCCAGAGACgcagaaccccccacatcccacctacatgaagcagctgccacgtcggacaacagacagccgctcagggtctgcactgggctgagggaggaggctctgccttggaaccatgactgcagagag i macFas5.chr19 C 0 I 109 s papAnu2.chr19 47292659 352 + 51301725 CCCAGCCCTCCCCATCACAGCCGGCACCTGAACCCTGGAAGAGCCGAAACCCAGTCAAGCCCCTACAGGACTTGCACACACTGCCCAGCCGGCCACCTAGGGGCCTGCGATCCAGGAACTGCCTGCCCTTTCCTACTCTGCTGGCACCTGACCAATCACCCCAGGGCCTGAGGTCAGGCCCACCCAGCTGGTAACACCACCACAACTGACGTCCACTCTCCCATCCAGAGACGCAGAACCCCCCACATCCCACCTATATGAAGCAGCTGCCACGTCGGACAACGGAAGGCCACTCAGGGTCTGCACTGGGCTGAGGGAAGAGGCTCTGCCTTGGAACCATGCCTGCAGAGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46984421 352 + 50890351 cccagccctccccatcacagccggcacctgaaccctggaagagccgaaacccagtcaagcccctacaggactcacacacactgtccagccggccacctaggggcctgcaatccgggaactgcctgccctttcctaccctgctggcacctgaccagtcaccccagggcctgaggtcgggcccacccagccggtaacaccaccacaactgacgtccactcTCCCATCCAGAGACGCAGAACCCCCCACATCCCACCTACCTGAAGCAGCTGCCATGTcagacaacagacagccgctcagggtctgcactgggctgagggaggaggctctgccttggaaccatgtctgcagagag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102784684 11972 + 122678785 T e ponAbe2.chr19 56041213 3000 + 60714840 M e calJac3.chr22 45479261 29820 + 49145316 I e nomLeu3.chr10 102827764 0 - 106955855 C e rheMac3.chr19 60145665 80755 + 64156825 T a score=692079.000000 s hg38.chr19_GL949747v2_alt 261085 858 + 729520 tggcaaggcaggtgtttcccactgccctcagccacactgtggcctggggagagacaagagtgtgtgtctgaactgagactcatgagccctggagcacgggtgtgatagggagacagacaacgttcctccctatgggactggaaacgg-tgtagctccttcactccccgcagagacctcagggcatttcactaggagctgctccagccatgtccatcaggactagtgcctgcactcatcactggga---tatctgtgggcaagccgggggttccagctctgcccaggggtgttccctcgcccctgtggaacaggaagctcagggcacctgacactccacggtccagcccttcccctgaaacaagagtcagcacctcacaggaaacacaccaggtccacatccacctgcttgtgccgagcgtggctcttacccttaagcaccagctcctggcctgcaatctgagctgcacagcccaatgcaaaccctgctgcagaagctcccaaagccat--gggaaaagccaaaagacccttcccaacatgctctacagtcaccctccctgcgggg-ctgggggaaaatgtgcaaaagaaatcccatccaaacgaaaataaattcgaagagagtaagtggaggcctctccagatgagaaggaatcagtgtaaggattctgacgccgtgaaaaatctgaatattgtggcaccaccaaaggatcgcactggctcgctagtgatggatgctgaaaacaatggaaactctgaaaggacagataaagaatgagactgacacaaaaacattacaaagaatcaatgaaagaaaacgttggttttttgaaagtataaataaaattgagagatggctgactacac s panTro4.chr19 59214830 857 + 63644993 tggcaaggcaggtgtttcccatggccctcagccacactgtggcctggggagagacaacagtgtgtgtctgaactgagactcatgagccctggagcacgggtgtgatagggagacagacaacgttcctccctatgggactggaaacgg-tgtagctccttcaccccccgcagagacctcagggcatttcactaggagctgctccagccctgtccatcaggactagtgcctgcactcatcactggga---tatctgtgggcaagccggggattccagctctgcccaggggtgttccctcgcccctgtggaacaggaagctcagggcacctgacactccacggtccagcctttcccctgaaacaacagtcagcacctcacaggaaacacaccaggtccatatccacctgcttgtgctgagggtggctcttactcttaagcaccagctcctggcc-gcaatttgagctacacagcctgacacaaaccctgctgcagaagcacccaaagctat--gggaaaagccaaaagacccttcccaacatgctctacagtcaccctccctgcgggg-ctgggggaaaatgcgcaaaacatatcccatgcaaacgaaaataaattcgaagagagtaagtggaggcctctccagatgagaaggaatcagtgtaaggattctgacgccgtgaaaaatctgaatattgtgacaccaccaaaggatcgcactagctcgctagcaatggacgctgaaaacaatggaaactgagaaaagacagataaagaatgagactgacacaaaaacattacaaagaatcaatgaaagaaaacgttgattttttgaaagtataaataaaattgagagatggctgactacac i panTro4.chr19 C 0 C 0 s macFas5.chr19 55185893 860 + 59248254 tggcaaggcaggtgtttcccacggctcccagccacaccgtggcctggggagagacaacagtgtgagtctgaactgagactcacgagccctggagcaggggtgtgatagggaaacagacaatgttcctccttatgggactggaagcggatgtagctccttcatcccctgcagagacctcagggcattttaccaggcgctgccccagccatgtccatcaggactggtgcctgcactcatcattagga---tattcgtgggcaagccaggggttccagctctgccccgctgtgttccctcaccccgttagaacaggaagctccgggctccagacactccacggtccagcccttccgctgaaacgacagacagcacctcacaggaaacacgccaggtccatatgcacctgcttgtgctgagggtggctcttacccttaagcaccagctcccggcctgcgatttgaactgaacagcccaacacaaaccgtgctgcagaagcgcccaaggctatggggaaaaagccaaaagacccttcccagcatgctctgcagtcacgctccccgcggggccggggggaaaatgcgcaaaagaaatcccatccagatgaaaataaattcaaagagagtaagtggcagcctctccagatgagaaggaatccgtgcaaggatcctgacgccgtgaaaaatctgaatattgtggcaccaccaaaggatcgcactagctctctagcgatggacgctgaaaacaacggaaactcagaaaggacagataaagaatgagacagagaaaaaaacattacaaagaatcagtgaaagaac--gttggttttttaaaagcataaataaaattgagagatggctgactacac i macFas5.chr19 I 109 C 0 s papAnu2.chr19 47293011 855 + 51301725 TGGCAAGGTGGGTGTTTCCCACGGCTCCCAGCCACACCGTGGCCTGGGGAGAGACAACAGTGTGAGTCTGAACTGAGACTCAGGAGCCCTGGAGCAGGGGTGTGACAGGGAAACAGACAATGT---CCCCTACGAAACTGGAAGCGGATGTAGCTCTTTCATCCCCAGCAGAGACCTCAGAGCATTTCACCAGGTGCTGCCCCAGCCACGTCCATCAGGACTGATGCCTGCACTCATCATTAGGA---TATTCGTGGGCAAGCCAGGGGTTCCAGCTCTGCCCCGCTGTGTTCCCTCACCCCGATGGAACAGGAAGCTCAGGGCTCCAGACACTCCACGGTCCAGTCCTTCCCCTGAAACGACAGACAGCACCTCACAGGAAACACGCCAGGTCCATATGCACCTGCTTGTGCTGAGGGTGGCTCTTACCCTTAAGCACCAGCTCCCGGCCTGTGATTTGAACTGAACAGCCCAACACAAACCGTGCTGCAGAAGCGCCCAAGGCTAT-GGGAAAAAGCCAAAAGACCCTTCCCAACATGCTCTGCAGTCACATTCCCTGCGGGG-CGGAGGGAAAATGCCCAAAAGAAATCCcatccaaatgaaaataaattcaaagagaGTAAGTGGCAGCCTCTCCAGATGGGAAGGAATCCGTGCAAGGATTCTGACGCTGTGAAAAATCTGAATATTGTGGCACCACCAAAGGATCGCACTAGCTCTCTAGCGATGGACGCTGAAAACAACGGAAACTCAGACAGGACAGGTAAAGAATGCGATGGAGACAAAAACATTACAAAGAATCAGTGAAAGaat--gttggttttttaaaagcataaataaaattgagagatGGCTGACTACAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46984773 862 + 50890351 tggcaaggcaggcgtttcccacgactcccagccacactgtggcctggggagagacaacagtgtgagtctgaactgagactcacgagccctggagcaggggtgtgagagggaaacagacaatgttcctccctatgggactggaagcggatgtagctccttcattccccgcagagacctcagggcatttcaccaggcgctgccccagccatgtccatcaggactggtgcctgcactcatcattaggatattattcgtgggcaagccaggggttccagctctgcccagctgtgttccctcaccccagtggaacaggaagctcagggctccagacactccacggtccagtccttcccctgaaacgacagacagcacctcacaggaaacacgccaggtccatatgcacctgcttgtgctgagggtggctcttacccttaagcaccagctcccagcctaccatttgaactgaacagcccaacacaaaccatgctgcagaagcgcccaaggctat-gggaaaaagccaaaagacccttcccaacgtgctctgcagtcacgctccccgcggggccggagggaaaatgcccaaaagaaatcccatccaaatgaaaataaattcaaagagagtaagtggcagcctctccagacgagaaggaatccgtgcagggatcctgacgccgtg-aaaatctgaatattgtggtgccaccaaaggatcgcactagctctctagcgatggacgctgaaaacaacggaaactcagaaaggacaggtaaagaatgagacggagacaaaaacattacaaagaatcagtgaaagaacgtgttggtgtttt-gaagcataaataaaattgagagatggctgactacac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102784684 11972 + 122678785 T e ponAbe2.chr19 56041213 3000 + 60714840 M e calJac3.chr22 45479261 29820 + 49145316 I e nomLeu3.chr10 102827764 0 - 106955855 C e rheMac3.chr19 60145665 80755 + 64156825 T a score=1000921.000000 s hg38.chr19_GL949747v2_alt 261943 816 + 729520 taacc-aaaaaaaggagatttaaataagcacaatcagaaatgataaagttgacattacaaccaacaccacagagatacaaaagatcatcagagactactatgaacacctttatgcacataaactagaaaacctggagaaaatagatgaattcctagacacacacaacttcccaagattgcacaggcaaaaaatagaaactctaaacagaccgataacaaccaatgaaaaaggatcagtactaaaaa-tcttccagcaaaaaagtccaggaacagatggattcgcagttgaacttagctgtatgtacgaaggagggctggtaccaatcatactgaaagtattcca-aaaatcaaggaagtgggattctttgccagctcattttacaaaatcagtatcatcctgatagcaaaatcagacaaggatccaacagaaaaataaaactacaggccaagaaatctgaggaacacagatgcaaaaatcctcaagaaaatactagcaaacggaatctaacagtgtatcaaaaacataattcatcatgatcaagttggcttgattccagggaagaaaggatggttcaatatatgc-aagtcaataaaagtgactcatgacatgaactaagaacaaaaagcatatgatcatctctatagatgcagataaagctttcaagaaagtccaacatcgcttcgtgataaaatccctcaacaggctaggcatgaaagaaacataccgcaaaataccaacaccccctgcgtgacaaacccacagccaacatcaaattgaatggggagaagtgaaaacattttccCAGGAAAATGAGAA s panTro4.chr19 59215687 815 + 63644993 taacc-aaaaaaaggagatttaaataagcacaatcagaaatgataaagttgacattacaaccaacaccacagagatacaaacgatcatcagagactactatgaacacctttatgcacataaactagaaaacctggagaaaatagatgaattcctagacacacacaacttcccaagattgcacaggcaaaaaatagaaaccctaaacagaccgataacaaccaatgaaaaaggatcagta-taaaaa-tcttccagcaaaaaagtccaggaacagatggattcgcagttgaacttagctgtatgtacgaagaagggctggtaccaatcatactgaaactattcca-aaaatcaaggaagtgggattctttgctagctcattctacaaaatcagtatcatcctgatagcaaaatcagacaaggatccaacagaaaaataaaactacaggccaagaaatctgaggaacacagatgcaaaaatcctcaagaaaatactagcaaacggaatctagcagtgtatcaaaaacataattcatcatgatcaagttggcttgattctagggaagaaaggatggttcaatatatgc-aagtcaataaaagtgactcatgacataaactaagaacaaaaagcatatgatcatctcaatagatgcagataaagcattcaagaaagtccaacatcgcttcgtgataaaatccctcaacaggctaggcatgaaagaaacatatcacaaaataccaacaccccctgcgtgacaaacccacagccaacatcaaattgaatggggagaagtgaaaacattttcccaggaaaatgAGAA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102827764 815 - 106955855 TAACC-aaaaaaaggagatttaaataagcacaatcagaaatgataaagttgacattacaaccaacaccacagaaatacaaaagatcatcagagactactatgaacacctttatgcacataaactagagaacctagagaaaatagatgaattcctagatacatgcaacttcccaagattgcacaggcaaaaaatagaaaccgtaaacagatcaataacaaccaatgaaaaaggatcagtactaaaaagtcttccagcaaaaaagcccaggaacagatggattcacagttgagcttagccatatgtatgaagaagggctggtgccaatcatactgaaagtattcca-aaaatcaaggaagtgggattctttgctagctcagtctacaaaatcagtatcatcctgatagcaaaatcagacaaggatccaacagaaaaataaaactacaggccaagaaatctgaggaacataggtgcaaaaatcctcaagaaaatactagcaaacagaatctaac--tgtatcaaaaacataattcatcatgatcaagttggcttgattccagggaagaaaggatggttcaatacatgcaaagtcaataaaagtgactcatgacataaact-agaacaaaaagcatatgatcatctcaatagatgcagataaagcattcaagaaagtccaacatcccttcatgataaaatccctcaacaggctaggcatgaaagaaacataccccaaaataccaacagcccctgcgtgacaaacccacagccaacatcaaattgaatggggagaagtgaaagcattttcccaggaaaatgggaA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55186753 817 + 59248254 taatc-acaaaaaggaaatttaagtaagtacaatcagaaatgatcaagttgacagtacaactaacaccacagaaatacaaacgatcatcagagactactaggaacagctttatgcacataaactagaaaacctagag-aaatggacgaattcctagacacatatagcttcccaagatctcacaggcaaaaaatagaaaccctaaacagaccaataacgaccaatgaaaaaggatcagtactaaaaagtcttccagcaaaaaggcccaggaacagatggattcacggctgaactttgccatatgtacgaagaagagctggtgccaatcataccgaaagtatttcagaaaatcaagcttgtggaattctttgctagttcattctacaaaatcagtatcatgtggatagcaaaatcacacaaggatccaacagaaaaataaaactacaggccaagaaacctgaggaacacagatgcaaaaatcctcaagaaaatactagcaaacggaatctaactgtgtatcaaaaacataattcatcatgctcaagttggcttgattccagggatggaaggatggctcaatatatgc-aagtcaataaagatgactcatgaaataaactaagaacagaaagcatatgatcatctcaatagatgcagataaagcattcaagaaagtccaacatcccttcatgataaaatccctcaacagacgaggcgtgaaagaaacatacctcaaaataataagagccccggcatgacaaacccacagtcaatatcaaattgaatagggagaaatgaaaactttttcccaggaaaatgggaA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47293866 818 + 51301725 TAACC-aaaaaaaGGAGATTTAAAtaagtacaatcagaaatgatcAAGTTGACAGTACAActaacaccacagaaatacaaaagatcatcagagactactatgaacagctttatgcacataaactaggaaacctagag-aaatggatgaattcctagacacatatagCTTCCCAAGATCGCACaggcaaaaaatagaaaacctaaacagaccaataacgacCAATGAAAAAGGATCAGTACTAAAAAGTCTTCCAGCAAAAAGGcccaggaacagatggattcacgGTTGAACTTTGCCATATGTACGAAGAAGAGCTGGTGCCAATCATactgaaagtatttcaaaaaatcaagCTTGTGGAATTCTTTGCTAGTTCATTCTACAAAATCAGTATCATCCGGATAGCAAAATCACACAAGGatccaacagaaaaataaaactacaggccaagAAACCTGaggaacacagatgcaaaaatcctcaagaaaatactagcaaacagaatctaACAGTGTATCAAAAACGTAATTCATCATGCCCAAGTTGGCTTGATTCCAGGGGTGAAAGGATGGCTCAATATATGCAAAGTCAATAAAGATGACTCAGGACATAAACTAAGAACAGAAagcatatgatcatctcaatagatgcagataaaGCATTCAAGAAAGTCCAACATCCCTTCACGATAAAATCCCTCAACAGACGAGGCAtgaaagaaacatacctcaaaataataagagccccGGCATGACAAACCTACAGTCAATATCAAATTGAATAGTGAGAAATGAAAACCTTTTCCCAGGAAAACGGGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46985635 819 + 50890351 gaaccaaaaaaaaggagatttaagtaagtacaatcagaaatgatcaagttgacagtacaaccaacaccacagagatacaaacgatcatcagagactactttgaacagctttatgcacataaactaggaaacctagag-gaatggatgaattcctagacacatatagcttcccaagatcgcacaggcaaaaaatagaaaccctaaacagaccaataacgaccaatgaaaaaggatcggtactaaaaagtcttccagcaaaaaggcccaggaacagatggattcacggttgaactttgccatatgtacgaagaagggctggtgccaatcatactgaaagtatttcaaaaaatcaagcttgtggaattctttgctagttcattctacaaaatcagtatcatctggatagcaaaatcacacaaggatccaacagaaaaataaaactacaggccaagaaacctgaggaacacagacgcaaaaatcctcaagaaaatacaagccaacggaatctaacagtgtatcaaaaacgtaattcatcatgctcaagttggcttgattccagggatgaaaggatggctcaatatatgcaaagtcaataaagatgactcatgacacaaactaagaacagaaagcatatgatcatctcaatagatgcagataaagtattcaagaaagtccaacatcccttcacgataaaatccctcaacagacgaggcatgaaagaaacataccccaaaataataagagcaccggcatgacaaacccacaatcaacatcaaattgaatagtgagaaatgaaaaccttttccCAGGAAGATGGGAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102784684 11972 + 122678785 T e ponAbe2.chr19 56041213 3000 + 60714840 M e calJac3.chr22 45479261 29820 + 49145316 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=189271.000000 s hg38.chr19_GL949747v2_alt 262759 140 + 729520 TGGGATCCTCCCTAG-CCCCTGGGGTCTCCTACTGGACCAGGGCCTATCTGTGGGGCAGGGTCCCTCTCATGCTAGAATCTCCCGTTCCCCTCGTCAAATCTCAGTGAAGTGGACCATGGCCATGGGAGTGACAGTCATGG s panTro4.chr19 59216502 140 + 63644993 TGGTATCCTCCCTAG-CCCCTGGGGTCTCCTACTGGACCAGGGCCTATCTGTGGGGCAGCGTCCCTCTCATGCTAGAATCTCCCGTTCCCCTCGTCAAATCTCAGTGAAGTGGACCATGACCATGGGAGTGACAGTCATGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102828579 140 - 106955855 TGGGATCCTCCCTAG-CCCCTGGGGTCTCCTACTGGACCAGGGCCTATCTGTGGGGCAGGGTCCCTCTCGTTCTATCATCTCCCGTTCCCCTCGTCAAATCTCAGTGAAGTGGACCATGGCCATGGGCGTGACAGTCATGG i nomLeu3.chr10 C 0 I 115 s macFas5.chr19 55187570 134 + 59248254 TGGGATCCTCCGTAATTCCCTGGGGTCTCCTACT-------GGCCTACCTGTGGGGCAAGGTCCCTCTCATACTGGAATCTCCCATTCCCCTCGTCAAATCTCAGTGAAGTGAACCATGGCCATGGGCGTGAGAGTCATGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47294684 141 + 51301725 TGGGATCCTCCATAATTCCCTGGGGTCTCCTACCGGACCAGGGCCTACCTGTGGGGCAAGGTCCCTCTCATGCTAGAACCTCCCATTCCCCTTGTCAAATCTCAATGAAGTGAACCATGGCCTTGGGCATGAGAGTCATGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46986454 141 + 50890351 TGGGATCCTCCGTAATTCCCTGGGGTCTCCTACTGGACCAGGGCCTACCTGTGGGGCAGGGTCCCCCTCATACTGGAATCTCCCATTCCCCTCGTCAAATCTCAGTGAAGTGAACCATGGCTGTGGGCATGAGAGTCATGG i chlSab2.chr6 C 0 I 96 s canFam3.chr1 102772712 135 + 122678785 TGTGAGCCTCCTGAG---CCTGCAATATCTGAC-AGACCAGGGCCTGGCTGTGGGGT-TGGTCCCTCCCAGACTAGGGTGTCCC-TTCCTCTCCTCAGATCTCACCTAGACAGAGCAAGGCCATGAGGGTGGGGGTCTTGG i canFam3.chr1 T 11972 C 0 e ponAbe2.chr19 56041213 3000 + 60714840 M e calJac3.chr22 45479261 29820 + 49145316 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=1000.000000 s hg38.chr19_GL949747v2_alt 262899 1 + 729520 C s panTro4.chr19 59216642 1 + 63644993 C i panTro4.chr19 C 0 I 78 s macFas5.chr19 55187704 1 + 59248254 C i macFas5.chr19 C 0 I 94 s papAnu2.chr19 47294825 1 + 51301725 C i papAnu2.chr19 C 0 I 94 s canFam3.chr1 102772847 1 + 122678785 C i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56041213 3000 + 60714840 M e calJac3.chr22 45479261 29820 + 49145316 I e nomLeu3.chr10 102828719 115 - 106955855 I e chlSab2.chr6 46986595 96 + 50890351 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=273.000000 s hg38.chr19_GL949747v2_alt 262900 1 + 729520 A s panTro4.chr19 59216721 1 + 63644993 A i panTro4.chr19 I 78 C 0 s canFam3.chr1 102772848 1 + 122678785 A i canFam3.chr1 C 0 I 168 e ponAbe2.chr19 56041213 3000 + 60714840 M e calJac3.chr22 45479261 29820 + 49145316 I e nomLeu3.chr10 102828719 115 - 106955855 I e chlSab2.chr6 46986595 96 + 50890351 I e papAnu2.chr19 47294826 94 + 51301725 I e macFas5.chr19 55187705 94 + 59248254 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=46184.000000 s hg38.chr19_GL949747v2_alt 262901 509 + 729520 CAGAGAGGCAGGGCTCTCCtgtagcaggacgagccgcagacaaaactcctcagacaccggattaaagaaggaagaggtttttattcagctgggagcgtgggcagactcgcgtcttaagagccgaactccccgaaaaagaaattcttggcctttttaaaggcttataactttaaggggtccacgtgaaagggtcgtgatacatcaagcaagcgtgggaaacatgactgtggggggctatatgcatcagctaacagaacaaaaagttttacagtgcttttttcatgcagtgtctggaatttacagataacaccagtagtttaggtcaggggttgatgttattattattactttttttaactcctacggccgggtggtggtgccaaggttgtctggctatttatcttacttttgtatttttccaacttttggctttttctctcttcctgttttgtgaactaggcaaggtggggggaggagggcagcaggagtagtagtggtctccttcctta s panTro4.chr19 59216722 506 + 63644993 CAGAGAGGCAGGGCTGTCCtgtagcaggacgagccgcagacaaaactcctcagacaccggattaaagaaggaagaggtttttattcagctgggagcgtgggcagactcgcgtcttaagagccgaactccctgagaaagaaattcttggcctttttaaaggcttataactttaaggggtccgcgtgaaagggtcgtgatacatcaagcaagcgtgggaaacgtgactg---ggggctacatgcatcagctaacagaacagaaagttttacagtgcttttttcatgcagtgtctggaatttacagataacaccagtagtttaggtcagaggttgatgttattattattactttttttaactcctacggccgggtggtggtgccaaggttgtctggctatttatcttacttttgtatttttccaactttttgctttttctctcttcctgttttgtgaactaggcaaggtggggggaggagggcagcaggaatagtagtggtctccttcctta i panTro4.chr19 C 0 C 0 e canFam3.chr1 102772849 168 + 122678785 I e ponAbe2.chr19 56041213 3000 + 60714840 M e calJac3.chr22 45479261 29820 + 49145316 I e nomLeu3.chr10 102828719 115 - 106955855 I e chlSab2.chr6 46986595 96 + 50890351 I e papAnu2.chr19 47294826 94 + 51301725 I e macFas5.chr19 55187705 94 + 59248254 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=39211.000000 s hg38.chr19_GL949747v2_alt 263410 43 + 729520 CTCCCACTTACAGGATTTTCCCACCAGCATCTCCATGGGTGGT s panTro4.chr19 59217228 43 + 63644993 CTCCCACTTACAGGATTTTCCCACCAGCATCTCCATGGGTGGT i panTro4.chr19 C 0 C 0 s macFas5.chr19 55187799 43 + 59248254 CTCCCACTTACTGGATTTTCCCACCAGCATCTCCACGGGTGGT i macFas5.chr19 I 94 C 0 s papAnu2.chr19 47294920 43 + 51301725 CTCCCACTTACTGGATTTTCCCACCAGCATCTCCACGGGTGGT i papAnu2.chr19 I 94 C 0 s chlSab2.chr6 46986691 43 + 50890351 CTCCCACTTACAGGATTTTCCCACCAGCATCTCCACGGGTGGT i chlSab2.chr6 I 96 C 0 e canFam3.chr1 102772849 168 + 122678785 I e ponAbe2.chr19 56041213 3000 + 60714840 M e calJac3.chr22 45479261 29820 + 49145316 I e nomLeu3.chr10 102828719 115 - 106955855 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=170609.000000 s hg38.chr19_GL949747v2_alt 263453 157 + 729520 GAGCTGTCCCGGACCCCG--------CTGGCTCATGTTTTCCCAGGACttggcctttctcgaatgctttatctgcatcggttgagatgatcacatgctttttgttcttagtttatgtcgtgagtcacctttattgacttgcatatattgaaccatccttTGAGAC s panTro4.chr19 59217271 156 + 63644993 GAGCTGTCCTGGACCCCG--------CTGGCTCATGTTTTCCTAGGACTTG-CCtttctcgaatgctttatctgcatcggttgagatgatcacatgctttttgttcttagtttatgtcgtgagtcatctttattgacttgcatatattgaaccatccttTGAGAC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102828834 157 - 106955855 GAACTGTCCCGGACCCCG--------CTGGCTCATGTTTTCCCAGGGCttggcctttcttgaatgctttatctgcatctgttgagatgatcacatgctttttgttcttagtttatgtcgtgagtcacctttattgacttgcatatattgaaccatccttTGAGAC i nomLeu3.chr10 I 115 C 0 s macFas5.chr19 55187842 151 + 59248254 GAACTGTCCCGGACCCCACCACGAGCCTGGCTCTTGTTTTCCCAGGGCttggactttcttgaaggctttatctgcctctattgagatgatcatatggtttctgttcttagtttatgtcgtgagtca--------------cgtatattgaACCATCCTTTGAGAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47294963 151 + 51301725 GAACTGTCCCGGACCCCGCCACGAGCCCGGCTCTTGTTTTCCCAGGGCTTGGACTTTCTTGAAGGCTTtatctgcctctattgagatgatcatatggttttcgTTCTTAGTTTATGTCGTGAGTCA--------------CGTATCTTGAACCATCCTTTGAGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46986734 151 + 50890351 GAACTGTCCCGGACCCCACCACGAGCCTGGCTCTTGTTTTCCCAGGGCttggactttcttgaaggctttatctgcctctattgagatgatcgtatggtttttgttcttagtttatgtcgtgagtca--------------cgtatattgaACCATCCTTTGAGAC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102772849 168 + 122678785 I e ponAbe2.chr19 56041213 3000 + 60714840 M e calJac3.chr22 45479261 29820 + 49145316 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=133475.000000 s hg38.chr19_GL949747v2_alt 263610 95 + 729520 AGGCACCAGGCTTTCTGCTGATATTTCAGACACGCATGGCATCTCTCCTGATCTCCTTTCACTGTCTGCCTGACATGTCCTCGTCTCATTGAGGG s panTro4.chr19 59217427 95 + 63644993 AGGCACCAGGCTTTCTGCTGATATTTCAGACACACATGGCATCTCTCCTGATCTCCTTTCACTGTCTGCCTGACATGTCGTCGTCTCATTGAGGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102828991 94 - 106955855 AGGCACCAGGCTTTCTGCTG-TATTTCAGACACACATGGCATCTCTCCTGATCTCCTTTCACTGTCTGCCTGGCCTGTCGTCATCTCATTAAGGG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55187993 95 + 59248254 AGGCACCGGGCTTTCTGCTAATATTTCAGCCACACAAGGCATCTCTCCTGATCTCCTTTCGCTGTCTGCCCGACCGGTCCTCATCTCATTGAGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47295114 95 + 51301725 AGGCACCGGGCTTTCTGCTGATATTTCAGACACACAAGGCATCTCTCCTGATCTCCTTTCGCTGTCTGCCCGACCGGTCCTCATCTCACTGAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46986885 92 + 50890351 AGGCGCCAGGCTTTCTGCTGATATTTCAGACACACAAGGCATCTCTCCTGA---CCATTCGCTGTCTGCCCGACTGGTCCTCATCTCACTGAGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45509081 94 + 49145316 AGCCACCAGGCTCTTTTCATACAATTCAGACAGAAATGGTGTCTC-CCTGATTTTTTTCTGCTGTTTGCTTCATCTGTTCCCATCTCATAAAGGG i calJac3.chr22 I 29820 C 0 e canFam3.chr1 102772849 168 + 122678785 I e ponAbe2.chr19 56041213 3000 + 60714840 M e rheMac3.chr19 60145665 80755 + 64156825 T a score=761771.000000 s hg38.chr19_GL949747v2_alt 263705 530 + 729520 CCGGGACGTAGCTGCAAATGGACGTGGTGCCTTCCTGAGTTGGTCCCTTCCAGGTGAAGGCAACGGAGGGTTCTTCCTTCCTCT-CAGAGACT-CCTCATGGGGTTTCACTCTCTCCTTCAGCTCACCCATAAACACACCCTTGTGGGGAACCTACCATGGCCAGTCTTCTCACCAGTCCTGGGGAAGCTTCAGGGAAGATGCAAATTCAGGCTGCGGGGCAGA-CTCACATCAGCAGAGACTC--GTCTCA-CATCTTGCTGTGCAGTTCCAGTTGAGCTTTATTGTGGCGATGAACAGAAAGGGGAAATACAGGGAGACAAGGGAAGGAATCATGTCTCTT-TTCCCAGAACTGGAGTGTGGGTTTTCTTTATGCAAAAACGTTCCCTTCACGAACTTCTCATTCACTCATCG-----CAACAG-CGTCCG--CCCCCGTCTCCCTGGAAA-CAACAT--TGACCTGACTCTGCCTTCTTGGTG-CCCCCGTCTTCTTTCAAACACTCCTGTTCCC---------ATCCTGTG-----CT----CCTGAGTTCAAGGTTCTGGGA s panTro4.chr19 59217522 530 + 63644993 TCGGGACGTAGCTGCAAATGGACGTGGTGACTTCCTGAGTTGGTCCCTTCCAGGTGAAGGCAACAGAGGGTTCTTCCTTCCTCT-CAGAGCCT-CCTCATGGGGTCTCACTCTCTCCTTCAGGTCATGCATAAACACACCCTTTTGGGGAACCTACCATGGCCAGTCTTCTCACCAGTCCTGGGGAAGCTTCAGGGAAGATGCAAATTCAGGCTGCAGGGCAGA-CTCACATCAGCAGAGACTC--ATCTCT-CATCTTGTTGTGCAGTTCCAGTTGAGCTTTATTGTGGCGATGAACAGAAAGGGGAAATAGACGGAGACAAGGGAAGGAATCATGACTCTT-TTCCCAAAACTGGAGTGTGGGTTTTCTTTATGCAAAAACGTTCCCTTCACGAACTTCTCATTCACTCATCG-----CAACAG-CATCCG--CCCCCGTCTCCCTGGAAA-CAACAT--TGACCCGACTCTGCCTTCTTGGTG-CCCCCGTCTTCTTTCAAACACTCCTGTTCCC---------ATCCTGTG-----CT----CCTGAGTTCAAGGTTCTGGGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102829085 530 - 106955855 CCGGGACATGGCTGCAAAAGGACGTGATGCCTTCCTGAGTTGGTCCCTTCCAGGTGAAGGCGACGGAGGGTTCTTCCTTCCTCT-CAGAGCCT-CCTCATGGGGTCTCACTCTCTCCTTCAGCTCACCCACAAACACACCCTTGTCGGGAACCTACCACGGCCAGTCTTCTCATCAGTCCTGGGGAAGCTTCAGGGAAGATGCAAATTCAGGCTGCAGGGCAGA-CTCACATCAGCAGAGACTC--ATCTCA-CATCTGGCTGTGCAGTTCCAGTTGAGCTTTATTGTGGCGGTGAACAGAAAGGGGAAATATACAGACACAAGGGAAGGAATCATGACCCTT-TTCCCAGAACTGGAGTGTGGGTTTTCTTTATGCAAAAACGTTCCCTTCACGAACTTCTCATTCACTCGTCA-----CAACGG-CATCCA--CCCCCATCTCCCTGGAAA-CAAAAT--TGACCTGACTCTGCCTTCTTGGTG-CCCCCGTCTTCTTTCAGGCACTCCTGTTCCC---------ATCCTGCG-----CT----CCTGCGTTCAAGGTTTTGGGA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55188088 528 + 59248254 CCAGGATGTAGCTGCAAATGGACATGGTGCCTTCCTGAGTTGGTCCCTTCGAGGTGAAGGCAACGGAGGGTTCTTCCTTCCTCT-CAGAGCCT-CTCCGTGGGGTCCCACTCTCTCCTTCAGGTCACCCGTAAACACACCCTTGTGGGGAACTTACCGCGGCCAGTCTTCTCACCAGTCCTGGGGAAGCTTCAGGGAAGATGCAAATTCAGGCTGCAGGGCAGA-CTCAGATCAGCAGAGACTC--CTCTCA-CGTCTGGCTGTGCAGTTCCAGTTGAGTTTCACTGTGGCAATGAGCAGAAAGCGGAAATACAGGGACACAAGGGAAGGAATCGTGACCCTT-TTCCCAGAACTGGAGTGTGGGTTTTCTCTATGCAAAAAAGTTCCCTTCACGAACTTCTCATTTACTCATCG-----CAACGGTCATCCG--CCCCCGTCTCCCTGGA----AACAT--TGGCCTGACTCTGCCTTCTTGGTG-CCCCCCCTTTCTTTCAAACACTCCTGTTCCC---------ATCCTGCG-----CT----CCTGCGTTCAAGGTTGTGGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47295209 534 + 51301725 CCAGGATGTAGCTGCAAATGGACGTGGTGCCTTCCTGAGTTGGTCCCTTCGAGGTGAAGGCAACAGAGGGTTCTTCCTTCCTCT-CAGAGCCT-CTCCGTGGGGTCCCGCTCTCTCCTTCGGCTCACCCGTAAACACACCCTTGTGGGGAACCTACCACGGCCAGTCTTCTCACCAGTGCTGGGGAAGCTTCAGGGAAGATGCAAATTCAGGCTGCAGGGCAGA-CTCAGATCAGCAGAGACTC--CTCTCA-CGTCTGGCTGTGCAGTTCCAGTTGAGTTTCACTGTGGCAATGAGCAGAAAGCGGAAATACAGGGACGCAAGGGAAAGAATCGTGACCCTT-TTCCCAGAACTGGAGTGTGAGTTTTCTTTATGCAAAAAAGTTCCCTTCACGAACTTCTCATTTACTCATCG-----CAACGGTCACCCAcccccccGTCTCCCTGGAAA-CAACAT--TGACCTGACTCTGCCTTCTTGGTGccccccccTTTCTTTCAAACACTCCTGTTCCC---------ATCCTGCG-----CT----CCTGCGTTCAAGGTTGTGGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46986977 531 + 50890351 CCAGGATGTAGCTGCAAATGGACATGGTGCCTTCCTGGGTTGGTCCCTTCGAGGTGAAGGCAACGGAGGGTTCTTCCTTCCTCT-CAGAGCCT-CTCCGTGGGGTGCCACTCTCTCCTTCGGCTCACCCGTAAACACACCCTTGTGGGGAACCTACCACGGCCAGTCTTCTCACCAGTCCTGGGGAAGCTTCAGGGAAGATGCAAATTCAGGCTGCAGGGCAGA-CGCAGATCAGCAGAGACTC--CTCTCA-CGTCTGGCTGTGCAGTTCCAGTTGGGTTTCACTGTGGCAATGAGCAGAAAGCAGAAATACAGGGACACAAGGGAAGGAATCGTGACCCTT-TTCCCAGAACTGGAGTGTGGGTTTTCTTTATGCAAAAAAGTTCCCTTCACGAACTTCTCATTTACTCATCG-----AAACGGTCATCCA--CCCCCGTGTCCCTGGAAA-CAACAT--TGGCCTGACTCTGCCTTCTTGGTG-CCCCCCATTTCTTTCAAACACTCCTGTTCCC---------ATCCTGCG-----CT----CCTGCGTTCAAGGTTTTgggg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45509175 522 + 49145316 TCAAGACACAGGAGCCAATAGACCCAGCACCTTTCTGAATTTGTCCTGTCTAAGTGAGGGTTACTAGGTGCTCG---TTCTTCT-CAGAACCT-CCCCATGGGTTC---CTCTCTCCTTTAGGCTGTCCATCAAAGCAGCATTGCAGGATCCTTACCAAGG-CAGTCATCTCTCCAGCCCTGGAGATGCTTCTGGGAAGTTGCAGATCCATGCTGCAGGGCAGA-GTTGGATAAGCAGAGACACGTATCTCA-CATCTGGCTGTGAAATTCAAGTTGGGCTGCA-GGTGGCAATGAGAAAAAAGGAGAAATA--------------AAGAAATGCTCACTCTTCTTTTTATCTTTGGAGCATGGGTTTTGTTTCTTTCA----GTTTCCTTTTTTTATACTTCCCTCCTCCGCCATTTTTTAATAG-CGTTCA--CCTCCACCTCCCTTAAAAGTAACCTC-TGAATCATTCCTGCCTTATCAGTG-TCCGCCCTATCCCT--AACA---CTGTTTCCTTGGGCATTCTCCTGCA-----TCTCAGTCTGGATTAAAGGGTTTGGGA i calJac3.chr22 C 0 I 77 s canFam3.chr1 102773017 495 + 122678785 CCAAGGCAATGCAGCAAATGGACCCTAAGGC-TACTGAGAT-GTCATGTCCAGGTCA-GACACC--AGGACATGTCCTTCCTTTCCAGAGCCTCCCCCATGGGGTC---------TCTTCAGTC------TCAGCACATCCCTG--GGGTCCTCACCATGGATGAGGTTCCCAGGACCC----AGATGCTGAAGGGAA--CTCAGGTTCTTGCTATTCTGTGGAGCTCATGTCAGCACAGACAG--ACCTTGTCATCT--CTGCTTAGCTCAGGTCGAGGT-CACTGTGGCAATAAGCCCAGAGGAGAAATACAGGCAAATAAGGAAGGAAA---CAACCCGT-CTCCTGGCCTTGCAGTGTGGGCTTTCTTTCTATCAGAG-----CCTCTATGGACTTCTCTATTTTCCTTTG-------ATGT-TATTTA--CTCAC-CCTTCTTGGGAA-CACTCCTGTGAGTCCTTCCTGGGTCATCAGTG-CCCCCTTGTTCCTAT-GGCGGAGCTGAAC-----------ATCCTACAGAGGCAT----CCTGACTCCAA-ATTGTAGGA i canFam3.chr1 I 168 C 0 e ponAbe2.chr19 56041213 3000 + 60714840 M e rheMac3.chr19 60145665 80755 + 64156825 T a score=88949.000000 s hg38.chr19_GL949747v2_alt 264235 68 + 729520 --CAATACGTGGGGTTagcactctgctttgaggga-aaatcttgtctttatttaaatattcatgtgtcacc s panTro4.chr19 59218052 68 + 63644993 --CAATACGTGGGGTTAGCACTCTGCTTTGAGGGG-AAATCTTGTCTTTATTTAAATATTCATGtgtcacc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102829615 68 - 106955855 --CAATACGTGGGGTTAGCACTCTGATTTGTAGGG-AAATCTCATCTTTATTTAAATATTCATGtgtcacc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55188616 68 + 59248254 --CAATACATAGGGTTAGCACTCTGATTTGAGGGG-ATATCTCGTCTTTATTTAATTATTCGTGTGTtacc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47295743 68 + 51301725 --CAATACATAGGGTTAGCACTCTGATTTGAGGGG-AAATCTcgtctttatttaaatattcatgtgTTACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46987508 68 + 50890351 --caatatgtagggttagcactctgatttgagggg-aaatctcgtctttatttaattattcatgtgttacc i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102773512 70 + 122678785 GATCATATGT-GGGTGAGTGCTCTGATTTGAGGAACAAAGCTGATGTTCAGGTCGATCCTCCTCCAGCATC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56041213 3000 + 60714840 M e calJac3.chr22 45509697 77 + 49145316 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=283681.000000 s hg38.chr19_GL949747v2_alt 264303 190 + 729520 ccctgcctgtgtgaccttgggcagtaacctcccatttctgagcctcggtttcctcatttgGAGCC---TGTGATGAACCCCATTTATCACAGGGGAGCT----GGGTCATTGGAGCCTGGGGACTGCAGGGGGCTCAGCCATGGGTAATTTCCAGAGCAGGTGAAGACAGGAGGGGTGGGGGCATGAGGGG-----ATGCTG s panTro4.chr19 59218120 190 + 63644993 ccctgcctgtgtgaccttgggcagtaacctcccatttctgagcctcggtttcctcatttgGAGCC---TGTCATGAACCCCATTTATCACAGGGGAGCT----GGGTCATTGGAGCCTGGGGGCTGCAGGGGGCTCAGCCATGGGTAATTTCCAGAGCAGGTGAAGACAGGAGGGGTGGGGGCATGAGGGG-----ATGCTG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102829683 190 - 106955855 gcctgcctgtgtgaccttgggcagtaacctctcatctctgagcctaagtttcctcatttgGAGCC---TGTCATGAGCCCCATTTATCACAGGGGAGCT----GGGTCATTGGAGCCTGGGGGCTGCAGGGGGCTCAGCCATGGGTAATTTCCAGAGCAGGTGAAGACAGGAGGGGAGGGGACATGAGGGG-----ATGCTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55188684 189 + 59248254 ccttgcctgtgtgaccttgggcagtaacttcccatctctgagcctcagtttcctcatttggagcc---tgtcatgaactccattcctcacagggtggct----gGGTCATTGGTGCCTGGGGGCTGCAGGGGGCTCAGCCATGGGTAATTTCCAGAG-AGGTGAAGACAGGAGAGGTGGGGGCGTGAGGGG-----ATGCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47295811 190 + 51301725 CCttgcctgtgtgaccttgggcagtaacttcccatctctgagcctcagtttcctcatttggagCC---TGTCATGAACTCCATTCCTCACAGGGGAGCT----GGGTCATTGGTGCCTGGGAGCTGCACGGGGCTCAGCCATGGGTAATTTCCAGAGCAGGTGAAGACAGGAGAGGTGGGGGCGTGAGGGG-----ATGCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46987576 190 + 50890351 ccttgcctgtgtgaccttgggcagtaacttcccatctctgagcctcagtttcctcatttgGAGCC---TGTCATGAACTCCATTCCTCACAGTGGGGCT----AGGTCATTGGTGCCTGGGGGCTGCACGGGGCTCAGCCATGGGTAATTTCCAGAGCAGGTGAAGACAGGAGAGGTGGGGCCGTGAGGGG-----ATGCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45509774 191 + 49145316 ccctgcctgcatgaccttgggcagtaa-gtcccaactctgagcttcagtttcctcatttgCGGCCTGTTGTCATAAACCCCCTC-----CTGAGTGGTTTTGGGGGCCAGTTGTGCCTGGGTCATGGGAGGACCTCAGTTGTGGTACTTTTCCAGACCAGGTTAAGACCTGAGGGGTTGAAACATGAGTTG-----ATCCTG i calJac3.chr22 I 77 I 8941 s canFam3.chr1 102773582 175 + 122678785 CACTGCCC-CAAGACTTTTAGCAG--------------AGTGATCTGGTGTAGTACTGTGTTGTC--------TGAACCCCACTCCT--CAGGGTGGTTCTGTGGGGGGCTGGGACCTGGACCATG-AGTGGGATCAATCAT-GTTAGTTTCCTAACCTGATTGAAATTATTGTGTTCAGGACACAAGAAGTATAAGTGTCA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56041213 3000 + 60714840 M e rheMac3.chr19 60145665 80755 + 64156825 T a score=22539.000000 s hg38.chr19_GL949747v2_alt 264493 15 + 729520 GCGCCCACCATCAAG s panTro4.chr19 59218310 15 + 63644993 GCGCCCACCATCAAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102829873 15 - 106955855 GCGCCCACCATCAAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55188873 15 + 59248254 GCGCCCACCATCAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47296001 15 + 51301725 GCGCCCACCATCAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46987766 15 + 50890351 GCGCCCACCATCAAG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102773757 15 + 122678785 GACCCCACAGTGAGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56041213 3000 + 60714840 M e calJac3.chr22 45509965 8941 + 49145316 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=361092.000000 s hg38.chr19_GL949747v2_alt 264508 214 + 729520 GCCTGAGATTGATGTTTCCACTAAGGAGAGCCCCTTTGTTCCTGCCCTTGAGAGATGCTTCTCATAATATTTCATCAACACCCCGGTTATCACAGTCATGTCCAGAAAATGAGAAATGAAAGCTTGTCAGAAGGAGAAGCGCCTGCATTAAAGAGAAAATTAAAACTGACAGAGCATTTGTGTCTGGTGCCATT-GGGGTCTTCAGGGAGGAAGT s panTro4.chr19 59218325 214 + 63644993 GCCTGAGATTGATGTTTCCACTAAGGAGAGCACCTTTGTTCCTGCCCTTGAGAGATGCTTCTCATAATATTTCATCAACACCCCGGTTATCACACTCATGTCCAGAAAATGAGAAATGAAAGCTTGTCAGAAGGAGAAGCGCCTGCATTAAAGAGAAAATTAAAACTGACAGAGCATTTGTGTCTGGTGCCATT-GGGGTCATCAGGGAGGAAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56044296 214 + 60714840 GCCTGAGATTGATGTTTCCACTAAGGAGAGCCCCTTTGTTCCTGCCCTTGAGAGA-ACTTCTCGTAATATTTCATCAGCACCCCGGTTATCACAGACATGTCCAGAAAATGGGAAATGAAAGCGTGTCAGAAGGAAAAGCACGTGCATTAAAGAGAAAATTAAAACTGACAGAGCATTTGTGTCTGGTACCATTAGGGGTCATCAGGGACGAAGC i ponAbe2.chr19 M 3000 C 0 s nomLeu3.chr10 102829888 212 - 106955855 GCCTGAGATTGATGTTTCCACTAAGGAGAGCCCCTTTGTTCCTGCCCTTGAGAGATGCTTCTCATAATATTTCTTCAGCACCCCAGTTATCACAGTCATGTGCAGAAAATGGGAAATGAGAGCTTGTCAGAAG---AAGCACCTGCATTAAAGAGAAAATTAAAACCGACAGAGCATTTATGTCTGGTGCCATTAGGGGTCATCAGGGAGGAAGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55188888 214 + 59248254 GCCTGTGATTGAGGTTTGCACTCAGGAGTGCCCGTTTGTTCCTGCCCTTGAGAGATGCTTCTCATAATATTTCATCAACACCCCAATTATCACAGTCATGTGCAGAAAATGGGAAATGAAAGCTGGTCAGAAGGAGAAG-ACCTACGTTAAAGAGAAAATTAAAACTGACAGAGCATTTGTGTCTGGTGCCATTAGGGGTCATTAGGGAGGAAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47296016 215 + 51301725 GCCTGTGATTGAGGTTTGCACTCAGGAGTACCCGTTTGTTCCTGTCCTTGAGAGATGCTTCTCATAATATTTCATCAACACCCCGATTATCACAGTCATGTGCAGAAAATGGGAAATGAAAGCTGGTCAGAAGGAGAAGCACCtacattaaagagaaaattaaaactgacagAGCATTTGTGTCTGGTGCCATTAGGGGTCATTAGGGAGGAAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46987781 214 + 50890351 GCCTGTGATTGAGGTTTGCACCCAGGAGTGCCCGTTTGTTCCTGCCCTTGATAGATGCTTCTCACAATGTTTCATCAACACCCCGGTTATCACAGTCAT-TGCAGAAAATGGGAAATGAAAGCTGGTCAGAAGGAGAAGCACCTACGTTAAAGAGAAAATTAAAACTGACAGAGCATTTGTGTCTGGTGCCATTAGGGGTCATTAGGGAGGAAGC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102773772 204 + 122678785 GAGGGTCAGTGATGCACACTCTTGAATGACCCCATGTGCCCCTAAAGCTGAGAAATACTATTTATACTGATTCTGAAA----TTGTTTGCAAAAGCCAA-TGGAGGAAA-GGGAATTGAAATTCTCTGGAACTGAGAGGAACCACAACAGAAACACAGGTCAAAGCTGAGTGAACATCAGTGCCTGGGGT-----GTGGCCTGGAGTGGTGAAAT i canFam3.chr1 C 0 I 797 e calJac3.chr22 45509965 8941 + 49145316 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=580277.000000 s hg38.chr19_GL949747v2_alt 264722 346 + 729520 AATTAAGTCACTAGTGTGCATACATTTAAGCATGAAATGCAAATCttttttttttttttttt-----cgagacagagtctcactctgtcgcccaggctggagtgcagtggcacaatctcagctcaccgcaacctccacctcccgggttcaaacgattctcctgtctcagcctcccgagtagctggcactacaagcacgcaccaccacacccggctaatttttgtatttttagtaaagatggggcttcaccatgttggccaggctggtctcaaactcctgccctcacctgatccgcctgcctccgcctcccaaagtgctgggattacaggggtgggccaccgcgcctggccA s panTro4.chr19 59218539 351 + 63644993 AATTAAGTCACTAGTGTGCATACATTTAAGCATGAAATGCAAAtctttttttttttttttttttttccgagacagagtctcactctgtcacccaggctggagtgcagtggcacaatctcagctcaccgcaacctccccctcccgggttcaaatgattctcctgcctcagcctcccgagtagctggcactacaagcatgcaccaccacacccagctaatttttgtatttttagtaaagatggggcttcaccatgttggccaggctggtctcaaactcctgacctcacctgatctgcctgcctccgcctcccaaagtgctgggattacaggggtgggccaccgcgcctggccA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56044510 337 + 60714840 AATTAAGTCACTAGTGTGCATACATTTAAGCATGAAATGCAAAtctttttttt--------------tgagacagagtctcactctgtcgcccaggctggagtgcagtggcacaatctcagctcaccgcaacctccgcctcccgggttcaaatgattctcctgcctcagcctcccgagtagctggcgctacaagcacgcaccaccacacccagctaatttttgcgtttttagtagagacggggtttcaccatgttggtcaagctggtctcaaactcctgacctcacatgagccgcctgcctcggcctcccaaagtgctgggattacgggggtgggccaccgcgcctggccA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102830100 344 - 106955855 AATTAAGTCACTAGTGTGCATACATTTAAGCATGAAATGCAAATCttttttttttttttt-------tgagacagagtctcactctgtcgcccaggctggagtgcagtggcacaatctcagctcaccgcaacctccgcttcccgggttcaaatgattcccctgcctcagcctcctgagtagctggcactacaagcacgcaccaccacacccggctaatttttgtatttttagtaaagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcacatgatccgcctgcctcagcctcccaaagtgctgggattacaggggtgggccaccctgcctggccA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55189102 333 + 59248254 AATTAAGTCACCAGGGTGCATGCATTTAAGCATGAAATGCAAATCAtttc-----------------tgagatggagtctcattctgtcccccaggctggagtgcagtggcgcagtcttggctgatcgcaacctgcgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaagcacgcaccaccacacctggctaatttttgta-ttatagtagagacggggtttcgccatgttggccaggctggtcttgaactcctgacctcaggtgatccacctgcctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47296231 334 + 51301725 AATTAAGTCACCAGGGTGCATGCATTTAAGCATGAAATGCAAATcatttc-----------------tgagacggagtctcactctgtcccccaggctggagtgcagtggcgcaatctcggctgatcgcaacctgcgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctggcactacaagcacgcaccaccacacccggctaatttttgtatttgtagtagagacggggttttgccatgttggccaggctggtcttgaactcctgacctcaggtgatccacctgcttcagcctcccaaagtgctgggattacaggcgtgagccaccgtgcctggcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46987995 334 + 50890351 AATTAAGTCACCAGGGTGCATGCATTTAAGCATGAAATGCAAATCAtttc-----------------tgagacggagtctcactctgtcccccaggctggagtgcagtggcgcaatctcggctgatcgcaacctccacctcccgggttcaagcgattctcctgcctcagcctcccgagtagctggcactacaagcacgcaccaccacacccggctaatttttgtatttgtagtagagacggggtttcgccacgttggccaggctggtcttgaactcctgacctcaggtgatccacctgcttcagcctcccaaagtgctgggattacaggcgtgagccaccgtgcccggccA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102773976 797 + 122678785 I e calJac3.chr22 45509965 8941 + 49145316 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=138216.000000 s hg38.chr19_GL949747v2_alt 265068 59 + 729520 AAATGCAAATCTTGACCTCTCATGATAAACTGAAAAATAGGAGTAAATTAAAAAATACA s panTro4.chr19 59218890 59 + 63644993 AAATGCAAATCTTGACCTCTCATGATAAACTGAAAAATAGGAGTAAATTAAAAAATACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56044847 59 + 60714840 AAATGCAAATCTTGACCTCTCATGATAAACTGAAAAATAGGAGTAAATTAAAAAATACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102830444 59 - 106955855 AAATGCAAATCTTGACCTATCATGATAAACTGAAAAATAGGAGTAAATTAAAAAATACA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55189435 59 + 59248254 AAATGCAAATCTTGACCTATCATGAGAAACTGAAAAATAGGAGTAAATTAAAAAATATA i macFas5.chr19 C 0 T 30396 s papAnu2.chr19 47296565 59 + 51301725 aaatgcaAATCTTGACCTATCATGAGAAACTGAAAAATAggagtaaattaaaaaataca i papAnu2.chr19 C 0 T 54055 s chlSab2.chr6 46988329 59 + 50890351 AAATGCAAATCTTGACCTATCATGAGAAACTGAAAAATAGGAGTAAATTAAAAAATACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45518906 59 + 49145316 AAATGCAAATCTTGACCTACCAAAATAAATTCAAAAATAGGAGGAAATTAACAAATACA i calJac3.chr22 I 8941 C 0 e canFam3.chr1 102773976 797 + 122678785 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=284189.000000 s hg38.chr19_GL949747v2_alt 265127 372 + 729520 TATGCTAGACTGAATTATGTAATTTAAAATGCATTTTTGTGTTTTGTGATTTTCAACTCAACATGTCAATAGCATTGCTTCTCAGTGGGACTGGACTTCCCGATAGTAAAAAGATAAGGGAAGGAGATGCTAAGAGAGTACTCTCAGGGGACTAACTGCAAGTGAGGAATTCTATACTTACTCAGGTTAATACCTGAAAGGTAAAGGGGTCAGCAGGGGACCAATTCCTAAACAGAAGAAGGCTCAGGGCAAGACGGACCTGTGAAG-CTG-TCTGGTTGGGCTTCCCCTTCGTGAGGGCTGAGGAGGGATTGGAGGGTGGATCTCTCAAATCATCAGATGTGCTTTCTCTTCCAGGTGTTATA-CTTACCCTTT s panTro4.chr19 59218949 371 + 63644993 TATCCTAGACTGAATTATGTAATTTAAAATGCATTTTTGTGTTTTGTGATTTTCAACTCAACATGTCAATAGCATTGCTTCTCAGTGGGACTGGACTTCCCAATAGTAAAAAGA-AAGGGCAGGAGATGCTAAAAGAGTATTCTCAGGGGACTAACTGCAAGTGAGGAATTCTATACTTACTCAGGTTAATACCTGAAAGGTAAAGGGGTCAGCAGGGGACCAGTTCCTAAACAGAAGAAGGCTCAGGGCAAGACGGACCCGTGAAG-CTG-TCTGGTGGGGCTTCCCCTTCGTGAGGGCTGAGGAGGGATTGGAGGGTGGATCTCTCAAATCATCAGAGGTGCTTTCTCTTCCAGGTGTTATA-CTTACCCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56044906 371 + 60714840 TATGCTAGACTGAATTATATAATTTAAAATGCATTTTTGTGTTTCGTGATTTTCAACTCAACATATCAATAGCATTGCTTCTCAGTGGGACTGGACTTCCCGATAGTAAAAAGA-AAGGGCAGGAGATGCTAAAAGAGTACTCTCAAGGGACCAACTGCAAGTAAGGGATTCTGTGCTTACTCAGGTTAATACCTTAAAGGTAAAGGGGTCAGCAGGGGACCAATTCCTAAGCAGAAGAAGGCTCAGGGCAAGACGGACCCGTGAAG-CCA-TCTGGTTGGGCTTCCTCTGCGTGAGGGCTGAGGAGGGATTGGAGGGTGGATCCCTCAAATCATCAGATGTGCTTTCTCTTCCAGGTGTTACA-CTTACCCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102830503 372 - 106955855 TATGCTAGACTGAATTAAATAATTTAAAATGCATTTTTGTGTTTTGTGATTTTCAACTCAACATGTCAATAGCATTGCTTCTCAGTGGGACTGGACTTCCTGATAGTAAAAAGA-AAGGGCAGGAGATGCTAAAAGAGTACTCTCAAGGGATTAACTGCAAGTGAGGAATTCTATGCTTACTCAGGTTAATACCTGAAAGGTAAAGGGGTCAGCAGGGGACCAATTCCTAAGCAGAAGAAGGCTGAGGGCAAGACGGACCTGTGAAGCCCC-TCAGGTTGGGCGTCCCCTGCGTGAGGGCTGAGGAGGGATTGGAGGGTGGATGCCTC-AATCATCAGATGTACTttctctcccaggtgttatatcttacccttt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45518965 369 + 49145316 TATGCTAGACTGAATTATCTAATTTAAAATGCATTTTTGTGTTTTGTGATTTTCAACTCAACATGTCAAAAGAATTGCTTCTCATTGGGATGGGACTTCC-AACAGAAAAAACA-AAGGCCAGGAGATGTTGAGGAAGTATCTTCAAGGAATGAATTGAAAGTGAGGAATTGGATGCTCAGCCAAGTTAATATCTGAAAGGTAAAAGGGTTAGCAGGGGACCAATTCCTAAGCAGAAGCA-GCTCAGGGTAAGATGGACCTGTGAAG-CTGATCAGGTCAGGCTTCCCCTGTGTGAGGGCTGAGGAGGGATTGGAGGGTGGATCCCTC-AATCATCAGATGTGCTTTTTCTT-CAGGTGTTCTATCCTATCTTTT i calJac3.chr22 C 0 C 0 e canFam3.chr1 102773976 797 + 122678785 I e chlSab2.chr6 46988388 0 + 50890351 C e papAnu2.chr19 47296624 54055 + 51301725 T e macFas5.chr19 55189494 30396 + 59248254 T e rheMac3.chr19 60145665 80755 + 64156825 T a score=8545.000000 s hg38.chr19_GL949747v2_alt 265499 9 + 729520 AACTAATAC s panTro4.chr19 59219320 9 + 63644993 AACTAATAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56045277 9 + 60714840 AACTAATAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102830875 9 - 106955855 aactaatat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55159098 9 + 59248254 aataaataa i macFas5.chr19 T 30396 C 0 s calJac3.chr22 45519334 9 + 49145316 AATTAATAC i calJac3.chr22 C 0 C 0 e canFam3.chr1 102773976 797 + 122678785 I e chlSab2.chr6 46988388 0 + 50890351 C e papAnu2.chr19 47296624 54055 + 51301725 T e rheMac3.chr19 60145665 80755 + 64156825 T a score=183029.000000 s hg38.chr19_GL949747v2_alt 265508 133 + 729520 AGAAATGTTTTCATCTATTTTGATAGAGAGAGTGGGAGGAAAAAGAAGGCATTTTCTGAGCTGCAAGTTACTAGATATTACTGTTTTCATGCTCAGTGAAGGCAATTTTAAATGATATCATCCAGTTGGAAGA s panTro4.chr19 59219329 133 + 63644993 AGAAATGTTTTCATCTATTTTGATAGAGAGAGTGGGAGGAAAAAGAAGGCATTTTCTGAGCTGCAAGTTACTAGATATTACTGTTTTCATGCTCAGTGAAAGCAATTTTAAATGATATCATCCAGTTGGAAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56045286 133 + 60714840 AGAAATGTTTTCATCTATTTTGATAGAGAGAGTGGGAGGAAAAAGAAGGCATTTTCTGAGCTGCAGGTTACTAGATATTACTGTTTTCATGCTCAGTGAAAGCAATTTTAAATGATGTCATCCAGTTGGAAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102830884 130 - 106955855 agaaatgttttcatctattttgatagagaaagtgggaggaaaaagaagGCATTTTCTGAGCTGCAAGTTACTAGATATTATTGTTTTCATGCTCAGCGAAAGCAATTTCAAATG---TCATCCAGTTGGAAGA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55159107 131 + 59248254 aTAAAAAATTTCACAAATCTTGATAGAG--AGTGAAAGGGAAAGGAAGGTATTTCCAGAGCTACATTTAAAATTTTTTTACTGTTTTCACACTCAGTGAAAGCAATTCTAAATGATGAAACTTAGTTGGAAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47242569 131 + 51301725 aaaaaaaatttcacaaatctTGATAGAG--agtgaaagggaaaggaaggtaTTTCCAGagctacatttaaaatttttttactgttttcacaCTCAGTGAAAGCAATTCTAAATGATGAAACTTAGTTGGAAGA i papAnu2.chr19 T 54055 C 0 s calJac3.chr22 45519343 133 + 49145316 GGAAATGTTTTCATCTACTTTGATAGAGAGAGTGTGAGGAAGAAGAAGGCATTTTCTGAGCTGCAGGTTACTAGATATTACTGTTTTTATGCTCAGTGAAAGTGATTTTAAATGATGTAATCCAGTTAGAAGA i calJac3.chr22 C 0 I 1 e canFam3.chr1 102773976 797 + 122678785 I e chlSab2.chr6 46988388 0 + 50890351 C e rheMac3.chr19 60145665 80755 + 64156825 T a score=4230.000000 s hg38.chr19_GL949747v2_alt 265641 3 + 729520 TCA s panTro4.chr19 59219462 3 + 63644993 TCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56045419 3 + 60714840 TCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102831014 3 - 106955855 TCA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55159238 3 + 59248254 TCA i macFas5.chr19 C 0 I 30253 s papAnu2.chr19 47242700 3 + 51301725 TCA i papAnu2.chr19 C 0 I 53921 e canFam3.chr1 102773976 797 + 122678785 I e calJac3.chr22 45519476 1 + 49145316 I e chlSab2.chr6 46988388 0 + 50890351 C e rheMac3.chr19 60145665 80755 + 64156825 T a score=2907.000000 s hg38.chr19_GL949747v2_alt 265644 8 + 729520 ATGAATCC s panTro4.chr19 59219465 8 + 63644993 ATGAATCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56045422 8 + 60714840 ACGCATCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102831017 8 - 106955855 ATGAATCC i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102773976 797 + 122678785 I e calJac3.chr22 45519476 1 + 49145316 I e chlSab2.chr6 46988388 0 + 50890351 C e papAnu2.chr19 47242703 53921 + 51301725 I e macFas5.chr19 55159241 30253 + 59248254 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=494277.000000 s hg38.chr19_GL949747v2_alt 265652 310 + 729520 ggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggagggcggatcac-----gaggtcaggagatcgagaccatcctggctaacacggtgaaacccccgtctctactaaaaatacaaaaaaattagctgggcgtggtggtgggcgcctatagtcccagctactcgggaggctgaggcaggagaatggtgtgaacctgggaggcggagcttgcagtgagcgcagattgtgccactgcactccagcctgggcgacagagcaagactccgtctcaaaaaaaaaaaaaaaaa------agaaTCAATG s panTro4.chr19 59219473 308 + 63644993 ggccaggctcggtggctcacgcctgtaatcccagcactttgggaggccgaggagggcggatcac-----gaggtcaggagatcgagaccatcctggctaacacggtgaaacccccgtctctactaaaaatacaaaaaaaatagctgggcgtggtggcgggcgcctatagtcccagctactcgggaggctgaggcaggagaatgttgtgaacctgggaggcggagcttgcagtgagcgcagattgtgccactgcactccagcctgggcgacagagcaagactccgtctcaaaaaaaaaaaagaaa--------gaaTCAATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56045430 314 + 60714840 ggccgggcccagtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcggatcac-----aaggtcaggagatcgagaccatcctggctaacacggtgaaa-ccccgtctctactaaaaatac-aaaaaattagccgggcatggtggcaggtgcctgtagtcccagctactcgggaggccgaggcaagagaacggcgtgaacctgggaggcggagcttgcagtgagcccagattgtaccactgcactccagcctgggcgacagagtgaaactccatctcaaaaaaaaaaaagaaaaaaaaagaagaTCAATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102831025 308 - 106955855 Agccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggatcac-----gaggtcaggagatcgagaccatcctggctaacacagtgaaa-ctccgtctctactaaaaatacaaaaagattagccgggcgtggtggcgggcgcctgtagtctcagctactcgggaggctgaggcaggagaatggcgtgaacctgggaggcggagcttgcagtgagcccagattgtgccactgcactccagcctgggcgacagagcgagacttcgtctcaaaaaaagaaaaaaaa-------aaGATCAATG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55189494 307 + 59248254 ggccgggctcagtggctcacgcctgtaatcctagcactttgggaggccaaggcaggtggatcacaaggtaaggtcaggagatggagaccatcctggctaacacggtgaaa-ccccgtctctactaaaaatag-aaaaaattagctgggcgtggtggcgggcgcctatagtcccagctactc-ggaggctgaggcaggagaacggtgtgaacccgggaggaggagcttgcagtgagccgagatcgcgccgct-cactccagcctgggcgacagagcgagactccgtctc----aaaaaaaaaaaaa------aaGGTCAATG i macFas5.chr19 I 30253 C 0 s papAnu2.chr19 47296624 307 + 51301725 ggccgggctcggtggctcatgcctgtaatcccagcactttgggaggccaaggcgggtggatcac-----aaggttaggagatggagaccatcctggctaacacggtgaaa-ctccgtctctactaaaaatag-aaaaaattagccgggcgtggtggt-ggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgggaatccgggaggcggaacttgcagtgagccgagatcgcgccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaaaaaaaaaaaa------aagatcaatg i papAnu2.chr19 I 53921 C 0 s chlSab2.chr6 46988388 297 + 50890351 ggccgggctcagtagctcacgcctgcaatcccagcactttgggaggccaaggcaggtggatcac-----aaggtcaggagatggagaccatcctggctaacacggtgaaa-ccgcgtctctactaaaaatag-aaaaaatg----gggcgtagtggt-ggtgcctgtagtcccagctacttgggaagctgaggcaggagaatggcgtgaacccgggaggaggagcttgcagtgagccgagatggcgccactgccctccagcctgggcgacagagtgagactccgtctc------aaaaaaaaaaa------aaGATCAATG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102773976 797 + 122678785 I e calJac3.chr22 45519476 1 + 49145316 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=1364153.000000 s hg38.chr19_GL949747v2_alt 265962 657 + 729520 AATCCAAAATGTAGAATATGAGATGCCACAGTGATG-TAAGTGAGAAACAGGCAAGTATTTGAAAAT----------------CACACACAGA--CATGCCCACATGAATGCAACCACACACGGGCACACATGTATGAGTCAGTGTGCATGTACACATGTGAGTACTCAGAGTTCAGCTACAGTGGAATTAGAACGTGTCTTCTCTAAAGGCAAGGATAAATGAATCCTCATTCGAAAATATATAATTGAGTGAATACTTAACTAAATAGGTGAAGTTATTCCAAATTTTTCT---TTTTTTTTAATCCTGTATGTAAAAGAGTAATTCATCCACTGAAGGATAAGTT-AAATAGCCCAGTA-CCCCAATCACACCTAGGCATGAAACACAATAGTACCATCTAAAATGAAATGATAATTTACAATCAGTAAGTGAAGAAAGGTATACTAGTAAAATATCTATTGGAAATATTAATATTCAACAAAATGTAACATAATCCAAAAAGTTTTAGAAATAAAAACTAAAATTTTGTGTTTTAATG-AAGTTGTAAGGGCTGGGCATGAAGGG-ATTTGCaggctgagcggggaggatcacttgagcccaggagttcaagaccagccagggcaa-atagtgagactcatctttaTTT--ATTTTTTTAAAAAAAGAAGG--TATTAAAGATG s panTro4.chr19 59219781 657 + 63644993 AATCCAAAACGTAGAATATGAGATGCCACAGCGATG-TAAGTGAGAAACAGGCAAGTATTTGAAAAT----------------CACACACAGA--CATGCACACATGAATGCAACCACACACGGGCACACATGTATGAGTCAGTGTGCATGTACACATATGAGTACTCAGAGTTCAGCTACAGTGGAATTAGAACGTGTCTTCTCTAAAGGCAAGGACAAATGAATCCTCATTCGAAAATATATAATTGAATGAATACTTAACTAAATAGGTGAAGTTATTCCAAATTTTTCG---TTTTTTTTAATCCTGTATGTAAAACAGTAATTCACCCACTGAAGGATAAGTT-AAATAGCCCAGTA-CCCCAATCACACCTAGGCACAAAACACAATAGTACCATCTAAAATGAAATGATAATTTACAATCAGTAAGTGAAGAAAGGTATGCTAGTAAAATATCTATTGGAAATATTAATATTCAACAAAATGTAACATAATCCAAAAAGTTTTAGAAATAAAAACTAAAATTTTGTGTTTTAATG-AAGTTGTAAGGGCTGGGCATGAAGGG-ATTTGCaggctgagcggggaggatcacttgagcccaggagttcaagaccagccagggcaa-atagtgagactcatctttaTTT--ATTTTTTTTAAAAAAGAAGG--TATTAAAGATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56045744 665 + 60714840 AATCCAAAGCGTAGAATATGAGATGCCACAGCGATG-TAAGTGAGAAACAGGCAAGTAATTGAAAAT----------------cacacacacacgcatccacacacgaatgcaaccacacacgggcacacacGTATGAGTCAGTGTGCATGTACACATACGAGTACTCAGAGTTCAGCTACAGTGGAGTTAGAACCTGTCTTCTCTAAAGGCAAGGATAAATGAATCCTCATTCGAAAATATATAATTGAATGAATACTTAACTAAATAGGTGAAGTTATTCCAAATTTTTTGGTTTTTTTTTTTACCCTGTATGTAAAAGAGTCATTCACCCACTGAAGGATGAGTT-AAATAGCCCAGTA-CCCCAATCACACCTAGGCATGAAACACAATAGTACCATCTAAAATAAAATGATAATTTACAATCAGTAAGTGAAGAAAGGTATGCTAGTAAAATATCTATTGGAAATATTAATATTCAACAAAATGTAACACAATACAAAAACTTTTAGAAATAAAAACTAAAATGTTGTGTTTTAATG-AAGTTGTAAGGGCTGGGCATGAAGGG-ATTTGCACgctgaggtgggaggatcacttgagcccaggagttcaagaccagccagggcaacacagtgagactcatctttaTTTTATTTTTTTTTTAAAAAGAAGG--TATTAAAGATG i ponAbe2.chr19 C 0 I 1254 s nomLeu3.chr10 102831333 653 - 106955855 AATCCAAAACGTAGAATATGAGACGCCACAGTGATG-TAAGTGAGAAACAGGCAAGTATTTGAAAAT----------------CACACACACA--CATGCACACGTGAATGCATCCACACACGGGCACACACATATGAGTCAGTGTGCATGTACACATATGAGTACTCAGAGTTCAGCTGCAGTGAAA-TAGAACCTGTCTTCTCTAAAGGCAAGGATAAATGAATCCTCATTCGAAAATATATAATTGAATGAATACTTAACTAAATAGGTGAAGTCATTCTAAATTTTTTT---TTTTTTTTAATCCTGTATGTAAAAGAGTAATTCACCCACTGAAGGATGAGTT-AAATAGCCCAGTA-CCCCAATCACACCTAGGCATGAAACACAATAGTACCATCTAAAATAAAATGATAATTTACAATCAGTAAGTGAAGAAAGGTATGCCAGCAAAATATCTATTGGAAATATTAATATTCAACAAAATGTAACGTAATACAAAAACTTTTAGAAATAAAAACTAAAATTTTGTGTTTTAATG-AAGTTGTAAAGGCTGGGCATGAAGGG-ATTTGCaggttgaggcggaaggatcacttgagcccagaagttcaagaccagccagggcaacatagtgagactcatctttaTTT------TTTTTAAAAAAGAAGA--TATTAAAGATG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55189801 660 + 59248254 ACTCCAAAACGTAGAATATGAGATGCCGCAGTGATG-AAAGTGGGAAACAGTCTAGTATTTGAAAAT----------cacacacacacacaca--catgcacacacGAATGCAACCACACGGGAGCACACACATATGAGTACATGTGCATGTACACATATCAGTACTCAGAGTTCGGCTACGGGGGAATTAGAACCTGTCTTCTCTAAAGGCGAGGATAAATGAATCTTCATTCGAAAATATATAATTGAATGAATACTTAACTAAATAGGCGAAGTTATTCCAAACTATTCA---TTTTTTT--ACCCTGTACGTAAAAGAGTAATTCACCCACTGAAGGATGAGTT-AAATAGCTCAGTAGCCCCAATAACACCTAGGCATGAAACACAACAGTACCATCCAAAATAAAATGATAATTTACAATCGGTAAGTGAAGAAAGGTATGCTATTAAAATATCTATTGGAAATATTAATACCCAATAAAATGTAACATGATACAAAAACTTTCAGAAATAAAAACTAAAATTTTGTGTTTTAATG-AAGATGTAAGAGCTGGGCATGAAGGGTttttgcaggttgaggtgggaggatcacttgagcccaggagttcaagaccggccagggcaacatagtgagactcATCTTCATTT--ATTTTTTT----AAAGAAGG--TATTAAAGATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47296931 657 + 51301725 acTCCAAAACGTAGAATATGAGATGCTGCAGTGATG-AAAGTGGGAAACAgtctaatatttgaaaat------------cacacacacacaca--catgcacacacgaatgcaaccacacgggggcacacacaTATGAGTACGTGTGCATGTACACATATCAGTACTCAGAGTTCAGCTACGGGGAAATTAGAACCTGTCTTCTCTAAAGGCGAGGATAAATGAATCTTCATTCGAAAATATGTAATTGAATGAATACTTAACTAAATAGGGGAAGTTATtccaaattattc----ctttttt--accCTGTACGTAAAAGAGtaattcacccactgaaggatgAGTT-AAATAGCTCAGTACCCCCAGTGACACCTAGGCATGAAACACAATAGtaccatctaaaataaaatgataatttagaATCAGTAAGTGAAGAAAGGTATGCTATTAAAATATCTATTGGaaatattaatatccaataaaatataacatgatacaaaaacttttagaaataaaaactaaaattttgtgttttaatg-aaGTTGTAAGAGCTGGGCATGAAGGGTTtttgcaggctgaggtgggaggatcacttgagcccaggagttcaagaccggccaggacaacatagtgagactcatcttcattt--attttttt----aaagaagg--tatTAAAGATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46988685 671 + 50890351 ACTCCAAAACGTAGAATATGAGATGCCGCAGCGATG-AAAGTGGGAAACAGTCTAGTATTTGAAAATcacacacacacacacacacacacgca--catgcacacacGAATGCAACCACACGGGGGCACACACATATGAGTACGTGTGCGTGTACACATATCAGTACTCAGAGTTCAGCTACAGGGGAATTAGAACCTGTCTTCTCTAAAGGCGAGGATAAATGAATCTTCATTCGAAAATATGTAATTGAATGAATACTTAACTAAATAGGTGAAGTTATTCCAAACTCTTCA---TTTTTTC--ACCCTGTACATAAAAGAGTAATTCACCCACTGAAGGATGAGTTAAAATAGCTCAGTACCCCCAATGACACCTAGGCATGAAACACAATAGTACCATCCAAAATAAAATGATAATTTGCAATCGGTAAGTGAAGAAAGGTATGCTATTAAAATATCTATTGGAAATATTAATGTCCAATAAAATGTAACATGATACAAAAACTTTCAGAAATAAAAACTAAAATTTTGTGTTTTAATG-AAGTTGTAAGAGCTGGGCGTGAAGGGTttttgcaggctgaggtgggaggatcacttgagcccaggagttcaagaccggccagggcaacatagtgagactcATCTTCATTT--ATTTTTTT----AAAGAAGG--TATTAAAGATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45519477 642 + 49145316 AATCTAAAATGTAGAATGTGAGATGCCACAGTGATGAAAAGTGGGAAACAGGCAAGTATTTGAAAAT----------------cacacacaca--cacacacacacacacacacacacacacGAGTACTCATATATG------TACATGCGTACATATATGAGTACTCAGAGTTCAGCTACAATGGAATTAGAACCTGTCTTCTCTAAAGGCAAGGATAAATGAATCCTCATTCAGAAATATATAATTGAATGAA----TAACTAAATAGGTGAAAT--TTCCAAATTATTCA---TTTTTT---ACCCTGTCTGTAAAAGAGTAATTCACCTACTGAAGGATGAGTC-AAAGAGCTCAATACCCACAATAACACCCATGCATGAAACACAGCAGTACCATCTAAAATAAA---ATAATTTCCAATCAGTAAGGGAAGAAGGGTATGCTATTAAAATACCTCTTGGAAATATTGATATCCAACAAAATGAAACATAATAC-AAAACATTTAGAAATTAAAACTAAAAGTTTGTGTTTTAATGTAGGTAGTAAGGGCTGGGCACAAAAGGTATTTGCaggctgaggc-caaggatcacttgagcccagaagttcgagaccagccagggcaacgtagtaagactgatctctatta--aa--ataaaaaaaaggaaGGTATATGAAAGGTG i calJac3.chr22 I 1 I 934 e canFam3.chr1 102773976 797 + 122678785 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=2548.000000 s hg38.chr19_GL949747v2_alt 266619 1 + 729520 A s panTro4.chr19 59220438 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56047663 1 + 60714840 A i ponAbe2.chr19 I 1254 C 0 s nomLeu3.chr10 102831986 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55190461 1 + 59248254 A i macFas5.chr19 C 0 I 1288 s papAnu2.chr19 47297588 1 + 51301725 A i papAnu2.chr19 C 0 I 1291 s chlSab2.chr6 46989356 1 + 50890351 A i chlSab2.chr6 C 0 I 1337 s calJac3.chr22 45521053 1 + 49145316 A i calJac3.chr22 I 934 C 0 e canFam3.chr1 102773976 797 + 122678785 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=2800.000000 s hg38.chr19_GL949747v2_alt 266620 1 + 729520 C s panTro4.chr19 59220439 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56047664 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102831987 1 - 106955855 C i nomLeu3.chr10 C 0 I 1255 s macFas5.chr19 55191750 1 + 59248254 C i macFas5.chr19 I 1288 C 0 s papAnu2.chr19 47298880 1 + 51301725 C i papAnu2.chr19 I 1291 C 0 s chlSab2.chr6 46990694 1 + 50890351 C i chlSab2.chr6 I 1337 C 0 s calJac3.chr22 45521054 1 + 49145316 C i calJac3.chr22 C 0 C 0 e canFam3.chr1 102773976 797 + 122678785 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=191852.000000 s hg38.chr19_GL949747v2_alt 266621 87 + 729520 TGGGAAAAATCACTGTATGAAAAACCGAGGAAGAAGGAATTAGGGCTCCCGAATGGGGTGAAGACCCACATGCAGAATGTCTCTGAG s panTro4.chr19 59220440 87 + 63644993 TGGGAAAAATCACTGTATGAAAAACCGAGGAAGAAGGAATTAGAGCTCCCGAATGGGGTGAAGACCCACATGCAGAATGTCTCCGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56047665 87 + 60714840 TGGGAAAAAGCACGGTATGAAATACCAAGGAAGAAGGAATTAGGGCTCCCGGATGGGGTGAAGACCCACATGCAGAGCGTCTCCAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102833243 87 - 106955855 TGGGAAAAATCACTGTATGAAAAACCGAGGAAGAAGGAATGAGGGCTCCCGGATGGGGTGAAGACCCACATGCAGAGTGTCTCCGAG i nomLeu3.chr10 I 1255 C 0 s macFas5.chr19 55191751 87 + 59248254 TGGGAAAAATTACTGTGTGAAAAACTGAGGAAGAAGGAATTAGGGCTCCTGGATGGGGTGAAGACCCATATACAGAGTATCTCCGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47298881 87 + 51301725 TGGGAAAAATTACTGTATGAAAAACTGAGGAAGAAGGAATTAGGGCTCCTGGATGGGGGGAAGACCCACATACAGAGTATCTCCGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46990695 87 + 50890351 TGGGAAAAATTACTGTGTGAAAAACTGAGGAAGAAGGAATTAGGGCTCCTGGATGGGGTGAAGACCCACATACAGAGTATCTCTGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45521055 87 + 49145316 TGGGAAAACCCATTGCATGAAACACGGAGGAAGAAGGAATTAGGGCGCCCCGGTGGGGTGAAGACCCAAGTGCAGAGTGTCTCCAAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 102773976 797 + 122678785 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=878537.000000 s hg38.chr19_GL949747v2_alt 266708 380 + 729520 CCCTGAGAGTGGAGCAGTGTGTTCAGGATCCTGAG-------CCTGTGGAACCAACATTCTCTGAGATGTGAGTCTATGGAATGTGTGTTATAAGACCTGCCTTTTGTTAGTATAATCCAGCAAAAGCCCATGGGCGAGGA-CCCAGTTTTATTTTAGGGAATGTGGGGACAGTATATTTTCTATTTGTGTTTATGCAAATTTCATATTGCTGATCAGTCATGCAGAAGGCGGAGGTCAGTGTGTTCACAGGATTCGTACCCGAGAGTCTGGAGACACATGTGGGGGTCCATGGGAAAGGCTGGTGGCCGGGTATGGTGGGAAGGTAATCAGCGACAGATGCCAGAGTCTCCTGCTT-GATCTTGCCGAAATCTGGCTCAAATGTTTGG s panTro4.chr19 59220527 380 + 63644993 CCCTGAGAGTGGAGCAGTGTGTTCAGGATCCTGAG-------CCTGTGGAACCAACATTCTCTGAGATATGAGTCTATGGAATGTGTGTTATAAGACCTGCCTTTTGTTAGTATAATCCAGCAAAAGCCCATGGGTGAGGA-CCCAGTTTTATTTTAGGGAATGTGGGGACAGTATATTTTCTATTTGTGTTTATGCAAATTTCATATTGCTGATCAGTCATGTAGAAGGCAGAGGTCAGTGTGTTCACAGGATTCGTACCCGAGAGTCTGGAGACACATGTGGGGGTCCATGGGAAAGGCTGGTGGCCGGGTATGGTGGGAAGGTAATCAGCGACAGATGCCAGAGTCTCCTGCTT-GATCTTGCTGAAATCTGGCTCAAATGTTTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56047752 376 + 60714840 CCCTGAGAGTGGAGCAGTGTGTTCAGGACCCTGAG-------TCTGCGGAAGGAATCTTCTCTGAGATGTGAGTCTATGGAATGTGTGTTGTAAGACCTGCCTTTTGTTAGTATAATCCAGCAAAAGCCCATGGATGAGGA-CTCAGTTTTATTTTAGGGGATGTGGGGACAGTATATTTTCTATTCATATTTATGCAAATTTCATAGTGCTGGTCAGTCATGTAGAAGGCAGAGGTCAGTGGGTTCACATGATTCGTACCCGAGAGTCTGGAGACACACGT-GGGGTCTATGGGAAAGGCTGGTGGCCGGGTATGGCGGGAAGGTAATCAGCGACAGATGCCAGAGTCTC---CTT-GATCTTGCCGAAATCTGGCTCAAATGTTTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102833330 380 - 106955855 CCCCGAGAGTGGAGCAGTGTGTTCAGGCCTCTGAG-------CCTGTGGAATGAATCTTCTCTGAGATGTGAGTCTATGGAACGTGTGTTGTAAGACCTGCCTTTTCTCAGTATAATCCAGCAAAAGCCCATGGGCGAGGA-CCCAGTTTTATTTTAGGGAATGTGGGGACAGTATATTTTCTATTCGTATTTATGCAAATTTCATAGTGCTGGTCAGTCATGTAGAAGGCAGAGGTCAGTGTGTTCGCAGGATTCGTACCCAAGAGTCAGGAGAAACACGTGGGGGTCCATGGGAAAGGCTGGTGGCCGGGTATGGCGGGAAGGTAATCAGCGACAGATGCCAGAATATCCTGCTT-GATCTTGCCGAAATCTGGCTCAAATATTTAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55191838 380 + 59248254 CCCTGAGAGTAGAGCAGTGTGTTCAGGGCCCTGAG-------CCTGTGGAAGGAATCTTCTCTGAGATGTGAGTCTGTGGAATGTGTGTTGTAAGACCTGCCTTTTACTAGTATAATCCAGCAAAAGCCCTTGGGTGAGGA-CCCAGTTTTATTTTAGGGAATGTGGGGACAGTATATTTCTTATTCATATTTGTGCAGATTTCATAGTGCTGGTCAGTCATGTAGAAGGCGGAGGTCAGTGTGTTCACAGGATTCGCACCCGAGAGTCAGGAGGCACACGTGGGGGTCCGTGGAAAAGGCTGGCGGCCTGGTATGGCGGGAAGGTCATCAGCGATAGACGCTAGAGTCTCTTGCTT-GATCTTGCTGAAATCTGGCTCAAATGTTTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47298968 380 + 51301725 CCCTGGGAGTAGAGCAGTGTGTTCAGGGCCCTGAG-------CCTGTGGAAGGAATCTTCTCTGAGATGTGAGTCTGTGGAATGTGTGTTGTAAGACCTGCCTTTTACTAGTATAATCCAGCAAAAGCCCTTGGGTGAGGA-CCcagttttattttaaggaatgtgGGGACAGTAtatttcttattcatctttgtgcaGATTTCATAGTGCTGATCAGTCATGTAGAAGGCGGAGGTCAGTGTGTTCACAGGATTCGTACCTGAGAGTCAGGAGGCACACGCAGGGGTCCGTGAAAAAGGCTGGCAGCCTGGTATGGCGGGAAGGTCATCAGCGACAGACACTAGAGTCTCCTGCTC-GATCTTGCCGAAATCTGGCTCAAATGTTTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46990782 380 + 50890351 CCCTGAGAGTAGAGCAGTGTGTTCAGGGCCCTGAG-------CCTGTGGAAGGAATCTTCTCTGAGATGTGAGTCTGTGGAATGTGTGTTGTAAGACCTGCCTTTTACTAGTATAATCCAGCAAAAGCCCATGGGCGAGGA-CCCAGTTTTATTTTAGGGAATGTGGGGACAGTATATTTCTTATTCATATTTGTGCAGATTTCATAGTGCTGGTCAGTCATGTAAAAGGTGGAGGTCGGTGTGTTCACGGGATTTGTACCCGAGAGTCAGGAGGCACACGCGGGGGTCCATGGAAAAGGCTGGCGGCCTGGTATGGTGGGAAGGTCATCAGCGATAGACGCTAGAGTCTCTTGCTT-GATCTTGCTGAAATCTGGCTCAAATGTTTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45521142 384 + 49145316 CCCCAAGGGTAGAGCAATGTGTTAAGGGCCCTGAGAATCTTCTCTGTGGGAGGAATCGTCTCTGAGATGTGAGTCTATGGAA--TATGCTGTAAGATATGCCTTTTATTAATATAATCCAGCAAAAGCCCAAGGACGAGGA-CCCAGTTTTATTTTAGGGAATGTGGGGACAGTATGTTTTCTTTTTATATTTATGCCAATTTCATAGTGCTGGTCAGTCACGTAGAAGGCAGAGGTCAGCATGTTCACAGCATTTGTACCCGAGAGTCACGAGACACACGT-GGGATCCATGGGAAAGGCTGGTGGCCAGGTATGGCTGAAAGGTAATCAGTGACAGATGCCAGAGTCTCCCGCTT-GATATCGCTGAAATCTAGCTCAAATTTTTGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19714535 341 - 122678785 CTCTGGGGACAGTGCAGTGTATGT------------------TGTGTGG-----ATCTGCTCTGCTATATAGATCTTAGGC---TATTTTGTAGGTTAGGGTTTATGTTAGTGTTTTCAGACAAGAGCCCCTGAGTGAACACCCCAGTTTGTTTTTAAGTGATATGGAGATAACATACT--CTGCTCATCGTTGTGTAATTTGAACAGTGCTGGTCC-CAGGGTAGAAAGGAGAAGTCCCTCTCTACATAGGATCCACATCT-AGAATGAGAATACATGTCTGG-------TGAGGAGAGTT----------TTCTTAAGGATGATAACCAACCCCAGAGGTTTTAACTTTCTGCTTCTGTGCTGCTGAAA-CTGGCCCTCCTATTTGG i canFam3.chr1 I 10229 T 10570 e rheMac3.chr19 60145665 80755 + 64156825 T a score=151455.000000 s hg38.chr19_GL949747v2_alt 267088 69 + 729520 CCTGGCACAACCAAACTAGAACTTGGAAGACGCTGTATAGGTAAAACATAATATTGTAATCATTCATAT s panTro4.chr19 59220907 69 + 63644993 CCTGGCACAACCAAACTAGAACTTGGAAGACGCTGTATAGGTAAAACATAATATTGTAATCATTCATAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048128 69 + 60714840 CCTGGCAGAATCAAACTAGAACTTGGAAGATGCTGTATAGGTAAAACATAATATTGTAATCATTCATAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102833710 69 - 106955855 CCTGGTACAACCAAACTAGAACATGGAAGACGCTGTATAGGTAAAACATAGTATTGAAATAATTCACAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55192218 69 + 59248254 CCTGGCACAACCAAACTAGAACTTGGAAGATGCTGTATAGATAAAACCTAATATTGTAACCATTCATAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47299348 69 + 51301725 CCTGGCACAACCAAACTGGAACTTGGAAGATGCTGTATAGATAAAACCTAATATTGTAACCATTCATAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46991162 69 + 50890351 CCTGGCACAACCAGACTAGAACTTGGAAGATGCTGTATAGATAAAACCTAATATTGTAACCATTCATAT i chlSab2.chr6 C 0 I 222 s calJac3.chr22 45521526 69 + 49145316 CTTGCCACGATCAAACTAGAATGTGGAAGATGCTGTATAGGCAAAGTATAATATTTTAATCATTCATAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19714876 10570 - 122678785 T e rheMac3.chr19 60145665 80755 + 64156825 T a score=36759.000000 s hg38.chr19_GL949747v2_alt 267157 27 + 729520 TCTGTTAAGG------------CTTTGAAAATGTCCTTA s panTro4.chr19 59220976 27 + 63644993 TCTGTTAAGG------------CTTTGAAAATGTCCTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048197 27 + 60714840 TCTGTTAAGG------------ATTCGAAAATGTCCTTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102833779 27 - 106955855 TCTGTTAAGG------------CTTTGAAAATGTCCTTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55192287 37 + 59248254 --TGTTATGGATATGAACATAACGTTGAAAATGTCCTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47299417 37 + 51301725 --TGTTATGGATATGAACATAACTTTGAAAATGTCCTTA i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45521595 27 + 49145316 TCTGGTAAGG------------CTTTGAAAATGTCCCTA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19714876 10570 - 122678785 T e chlSab2.chr6 46991231 222 + 50890351 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=1239.000000 s hg38.chr19_GL949747v2_alt 267184 2 + 729520 -AT s panTro4.chr19 59221003 2 + 63644993 -AT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048224 2 + 60714840 -AT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102833806 2 - 106955855 -AT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55192324 2 + 59248254 -AT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47299454 2 + 51301725 -AT i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46991453 2 + 50890351 -AT i chlSab2.chr6 I 222 C 0 s calJac3.chr22 45521622 2 + 49145316 AA- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19714876 10570 - 122678785 T e rheMac3.chr19 60145665 80755 + 64156825 T a score=1911.000000 s hg38.chr19_GL949747v2_alt 267186 1 + 729520 A s panTro4.chr19 59221005 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048226 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102833808 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55192326 1 + 59248254 A i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46991455 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45521624 1 + 49145316 A i calJac3.chr22 C 0 C 0 e canFam3.chr1 19714876 10570 - 122678785 T e papAnu2.chr19 47299456 1 + 51301725 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=115320.000000 s hg38.chr19_GL949747v2_alt 267187 73 + 729520 AGATTTCTTTATCCTGGAAGGTAGATGGCAAATGATAACATTTCTTTATTCTAGAGGGTAGATGGCAAACGAT s panTro4.chr19 59221006 73 + 63644993 AGATTTCTTTATCCTGGAAGGTAGATGGCAAATGATAACATTTCTTTATTCTAGAGGGTAGATGGCAAACGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048227 36 + 60714840 AG-------------------------------------ATTTCTTTATTCTAGAGGGTAGATGGTGAATGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102833809 73 - 106955855 AGATTTCTTTTTTCTAGAGGGTAGATGGTGAGTGATAAGATTTCTTTATTCTAGAGGATAGATGGTGAATGAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55192327 73 + 59248254 AGATTTCTTTATTCTAGAAGGTAGATGGTGAATGATGAGATTTCTTTGTTCTAGAGGGTAGATGGCGAATGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47299457 73 + 51301725 AGATTTCTTTATTCTAGAGGGTAGATGGTGAATGATAAGATTTCTTTACTCTAGAAGGTAGATGGCAAATGAT i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46991456 73 + 50890351 AGATTTCTTTACTCTAGAAGGTAGATGGCAAATGATAACATTTATTTACTCTAGAGGGTAGATGGTGAATGAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45521625 70 + 49145316 ACATTTCTTTATCGTACAGTGAAAACGGTGA---ATAAGATTTCTTAATTCTAGGGGGTGGATGGAGAATGAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19714876 10570 - 122678785 T e rheMac3.chr19 60145665 80755 + 64156825 T a score=143715.000000 s hg38.chr19_GL949747v2_alt 267260 87 + 729520 AAGATTTCTTTATTCTAGAGGTTAGATGGTGAATGATATGATTTCTTTATTCTAGAGGGTAGATGGTGAATGATAACATTTCTCTAT s panTro4.chr19 59221079 87 + 63644993 AAGATTTCCTTATTCTAGAGGTTAGATGGTGAATGATATGATTTCTTTATTCTAGAGGGTAGATGGTGAATGATAACATTTCTCTAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048263 87 + 60714840 AAGATGTCTGTATTCTAGAGGGTAGATGATGAATGATAAGATTTCTTTATTCTAGAAGGTAGATGGCAAACGATAAGATTTCTTTAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102833882 87 - 106955855 AAGATTTCTTTATTCTAGAGGGTAGATGGTGAATGATAAGATTTCTTTTTTCTAGAGGGTAGATGGTGAGTGATAAGATTTCTTTAT i nomLeu3.chr10 C 0 I 370 s macFas5.chr19 55192400 87 + 59248254 AAGATTTCTTTATTCTAGAGGGTAGATGGCAAATGATAAGATTTCTTTATTCTAGAGGGTAGATGGCAAATGATAAGATTTCTTTAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47299530 87 + 51301725 AACATTTATTTACTCTAGAGGGTAGATGGTGAATGATGAGATTTCTTTATTCTAGAGGGTAGATGGTGAATGATAAGATTTCTTTAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46991529 87 + 50890351 GAGATTTCTTTATTCTAGAGGGTAGATGGCAAATAATAAGATTTCTTTATTCTAGAGGATAGATGGTGAATGATAAGATTTCTTTAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19714876 10570 - 122678785 T e calJac3.chr22 45521695 0 + 49145316 C e rheMac3.chr19 60145665 80755 + 64156825 T a score=148787.000000 s hg38.chr19_GL949747v2_alt 267347 100 + 729520 TCTAGAGGGTAGATGGTGAATGATAAGATGTCTTTATTCTAGAGGGTAGCTGGCGAACGATAAGATTTCTTTACTCTAGAGGGTAGACGGCAAATGATAA s panTro4.chr19 59221166 100 + 63644993 TCTAGAGGGTAGATGGTGAATGATAAGATGTCTTTATTCTAGAGGGTAGCTGGCGAACGATAAGATTTCTTTACTCTAGAGGGTAGACGGCAAATGATAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048350 69 + 60714840 TCTAGAGGGTAGATGGTGAATGATAAGATGTCTTTATTCTAGAGGGTAGATAGCGAATGATAAGATTTC------------------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102834339 100 - 106955855 TCTAGAGGGTAGATGGTGAATGATAAGATGTCTTTATTCTAGAGGGTAGATGGCAAATGGTAAGATTTCTTTACTCTAGAGGGTAGATGGCAAATGATAA i nomLeu3.chr10 I 370 C 0 s macFas5.chr19 55192487 100 + 59248254 TCTAGAAGGTAGATGGCAAATGATAACATTTATTTACTCTAGAGGGTAGATGGTGAATGATGAGATTTCTTTATTCTAGAGGGTAGATGGCAAATGATAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47299617 100 + 51301725 TCTAGAGGGTAGATGGTGAATGATAAGATTTCTTTATTCTAGAGGGTAGATGGTGAATgataatatttctttattctagAGGGTAGATGGTGAATGATAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46991616 100 + 50890351 TCTAGAGGGTAGATAGTGAATGATGAGATTTCTTTATTCTAGAGGGTAGATGGTGAATGATAAGATTTCTTTATTCTAGAGGGTAGATAGTGAATGATAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19714876 10570 - 122678785 T e calJac3.chr22 45521695 0 + 49145316 C e rheMac3.chr19 60145665 80755 + 64156825 T a score=47952.000000 s hg38.chr19_GL949747v2_alt 267447 24 + 729520 GATTTGTTTACTCTAGAGGGTAGA s panTro4.chr19 59221266 24 + 63644993 GATTTGTTTACTCTAGAGGGTAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048419 18 + 60714840 ------TTTATTCTAGAGGGTAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102834439 24 - 106955855 GATTTGTTTACTCTAGAGGGTAGA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55192587 24 + 59248254 GATTTCTTTATTCTAGAGGATAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47299717 24 + 51301725 CATTTGTTCATTCTAGAGGGTAGA i papAnu2.chr19 C 0 I 181 s chlSab2.chr6 46991716 24 + 50890351 GATTTCTTTATTCTAGAGGGTAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45521695 24 + 49145316 GATTTCTTTACTCTCGAGGGTAGG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19714876 10570 - 122678785 T e rheMac3.chr19 60145665 80755 + 64156825 T a score=57958.000000 s hg38.chr19_GL949747v2_alt 267471 31 + 729520 TGGTGAATGATAACATTTCTTTATTCTAGAG s panTro4.chr19 59221290 31 + 63644993 TGGTGAATGATAAGATTTCTTTATTCTAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048437 31 + 60714840 TGGTGAATGATAACATTTCTTTATTCTAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102834463 31 - 106955855 TGGTGAACGATAAGATTTCTTTACTCTAGAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55192611 31 + 59248254 TGGTGAATGATAAGATTTCTTTATTCTAGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47299922 31 + 51301725 TGGCGAATGATAAGATTTCTTTATTCTAGAG i papAnu2.chr19 I 181 C 0 s chlSab2.chr6 46991740 31 + 50890351 TGGTGAATGATAACATTTGTTTATTCTAGAG i chlSab2.chr6 C 0 I 107 s calJac3.chr22 45521719 27 + 49145316 ---TGGATGGCTGC-TCCCTTTGTCCTAGAA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19714876 10570 - 122678785 T e rheMac3.chr19 60145665 80755 + 64156825 T a score=11140.000000 s hg38.chr19_GL949747v2_alt 267502 10 + 729520 AGTAGATTGT s panTro4.chr19 59221321 10 + 63644993 AGTAGATTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048468 10 + 60714840 GGTAGATGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102834494 10 - 106955855 GATAGATGGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55192642 10 + 59248254 GGTAGATGGT i macFas5.chr19 C 0 I 329 s papAnu2.chr19 47299953 10 + 51301725 GGTAGATGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46991878 10 + 50890351 GGTAGATGGT i chlSab2.chr6 I 107 C 0 s calJac3.chr22 45521746 6 + 49145316 ---AGTTCA- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19714876 10570 - 122678785 T e rheMac3.chr19 60145665 80755 + 64156825 T a score=7301.000000 s hg38.chr19_GL949747v2_alt 267512 4 + 729520 GAAT s panTro4.chr19 59221331 4 + 63644993 GAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048478 4 + 60714840 GACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102834504 4 - 106955855 GAAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55192981 4 + 59248254 GAAT i macFas5.chr19 I 329 C 0 s papAnu2.chr19 47299963 4 + 51301725 GAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46991888 4 + 50890351 GAAT i chlSab2.chr6 C 0 I 126 s calJac3.chr22 45521752 4 + 49145316 GGAC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19714876 10570 - 122678785 T e rheMac3.chr19 60145665 80755 + 64156825 T a score=28537.000000 s hg38.chr19_GL949747v2_alt 267516 19 + 729520 ATTTGGTCCTTCATGTTTT s panTro4.chr19 59221335 18 + 63644993 ATTTGGTCCTTCATGTTT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048482 18 + 60714840 ATTTGGTCCCTCATGTTT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102834508 18 - 106955855 ATTTGGTCCTTCATGTTT- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55192985 18 + 59248254 ATTCGGTCCCTCATGTTT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47299967 18 + 51301725 ATTCGGTCCCTCATGTTT- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45521756 18 + 49145316 ATTGGATCCCTCATGTTT- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19714876 10570 - 122678785 T e chlSab2.chr6 46991892 126 + 50890351 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=1258155.000000 s hg38.chr19_GL949747v2_alt 267535 573 + 729520 CTCAGGATCCTCCCTCCAAACATTCTATCCTATACAGCAAAGCTTTACATCCTTCAAACACAACAGTCGTCTTGGACCTAGATATGTTGAACTCTTTAATGCTAGGACTCAAGTCCTCTTGCTGT--TTGGGACAATTCAGAAAAGAATCAGCCCCAGTCA-TTTTGCATACTTCTGTCTGACTGTCATAGGTGAGTAGAAAGAAACAGCTCAACTGCTTGACAAGATTCATCGACCTGAGGTCTTGTCTGCAGCTGGATTTCTATCCTACTTCCGTGATTTTCCTTTCGTGGATCACCAACACACTGCAAATGCCTATCATTGCTTTTGACGTggtgtactttggttctgcctggaaaggcaggaagtctcgaagtgaggagctcacaggtcaaagg-agattgaaatgttttcagacagaataggcaaatccgtagagacagaaagcacacttgtggttagcaggtgctggagggaagagggaatggggagtggctgctgaatgggtgtaggatgatgacaatg-tgtggaacaggatggcagtgatggttacacaGTGATCTGAGGAGAAGATAC s panTro4.chr19 59221353 573 + 63644993 CTCAGGATCCTCCCTCCAAACATTCTATCCTATACAGCAAAGCTTTACATCCTTCAAACACAACAGTGGTCTTGGACCTAGACATGTTGAACTCTTTAATGCTAGGACTCAAGTCCTCTTGCTGT--TTGGGACAATTCAGAAAAGAATCAGCCCCAGTCA-TTTTGCATACTTCTGTCTGACTGTCATAGGTGAGTAGAAAGAAACAGCTCAACTGCTTGACAAGATTCATCGACCTGAGGTCTTGTCTGCAGCTGGATTTCTATCCTACTTCCGTGATTTTCCTTTCGTGGATCACCAACACACTGCAAATGCCTATCATTGCTTTTGACGTggtgtactttggttctgcctggaaaggcaggaagtctcgaagtgaggagctcacaggtcaaagg-agattgaaatgttttcagacagaataggcaaatccgtagagacagaaagcacactcgtggttagcaggtgctggagggaagagggaatggggagtggctgctgaatgggtgtagggtgatgacaatg-tgtggaataggatggcagtgatggttacacaGTGATCTGAGGAGAAGATAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048500 570 + 60714840 CTCAGGATCCTCCCTCCAAACATTCTATCCTATGCAGCAAAGTTTTACATCCTTCAAACACAACAGTGGTGTTTGACCTAGACATGTTGAACTCTTTAATGGTAGGACTCAAGTCCTCTTGCTGT--TTGGGAGAATTCAGAAAAGAATCAGCCCCAGTCA-TTTTGCATACTTCTGTCTGACTGTCATAGGTCAGTAGAAAGAAACAGCTCAACTGCTTGACAAGATTCATCAACCTGAGGTCTTGTCTTCACCTGGATGTCTATCCTGCTTCTGTGATTTTCCTTTTGTGGATCACCAACACACTGCAAATGCCTATCATTGCTTTTGACATggtgtactttggttctgcctggaaaggcagggcatcttaaaatgaggagctcacaggtcataggtggattaaaagatttTtagccagaataggcaaatccgtagagacagaaagcatactcgtgg-tagcaggtgctggagggaagagggaatggggagtggctgctgaatgggtgtagggtgatgataatg-tgtggaacgggatggcagtgatgtttacacaaTGATCT---GAGAAGCTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102834526 571 - 106955855 CTCAGGATCCTCCCTCCAAACCTTCTATCCTATGCAGCAGGGTTTTACATCCTTCAAACACAACAGCGGTCTTGGACCTAGACATGTTGAACTCTTTAATGCTAGGACTCAAGTCCTCTTGCTGT--TTGGGACAATTCAGAAAAGAATCAGCCCCAGTCA-TTTTGCATAGCTCTATCTGACTGTCATAGGTGAGCAGAAAGAAACAGCTCAACTGCTTGACAAGATTCATCAACCTGAGGTCTTGTCTGCAGCTGGATTTCTATCCTCCTTCTGTGATTTTCCTTTCATGGATCGCCAACACACTGCAAATGCCTATCATTGCTTTTGACATggtgtactttggttctgcctggaaaggcagggcatcttaaaatgaggagctcataggtcataggtggattaaaagattttcAGccagaacaggcaaatccatagacatagaaagcacactcgtggttagcaggtgctggagggaagagggaatggggagtggctgctgaatgggtgtagggtgatgacaatg-tgtggaacaggatggcagtgatggttacacaaTGATCT---GAGAAGCTGC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55193003 575 + 59248254 CTCACGTTCCTCCCTCCAAACATTCTATTCTATGCAGCAGGGTTTTACATCCTTCAAACACAACAGTGGTCTTTGACCTAGACATGTTGAACTCTTTAGTGCTAGGACTCAAGTTCTCTTGCTGT-TTTGGGACAATTCAGAAAAGAATCAGCCCCAGTCC-TTTTGCATACTTCTGTCTGACTGTCCTAGGTGAGTAGAAAGAAACAGTTCAACTGCTTGACAAGATTCATTGACCTGAGGTCTTGTCTGCAGCTGGATTTCTATTCTACTTCTGTGATTTTCCTTTCGTGGATCACCAACGCACTGCAAACGCCTATCATTGCTTTTGACATGGGGtactttggttcttcctggaaaggcagggagtctcagagtgaggagctcacagatcataggcagattgaaatgttttcAGCAagaataggcaaacccatagagacagaaagcacactcgtggttagcaggtgctggagggaggaaggaatggggggtggctgctgactcggtgtagggtgatgacaatg-tgtggaacaggatggcagtgatggttacacaaTGATCTGAGGAGAAGCTGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47299985 574 + 51301725 CTCACATTCCTCCCTCCAAACATTCTATTCTATGCAGCAGGGTTTTACATCCTTCAAACACAACAGTGGTCTTTGACCTAGACATGTTGAACTCTTTAGTGCTAGGACTCAAGTCCTCTTGCTGT-TTTGGGACAATTCAGAAAAGAATCAG-CCCAGTCA-TTTTGCATACTTCTGTCTGACTGTCCTAGGTGAGTAGAAAGAAACAGTTCAACTGCTTGACAAGATTCATTGACCTGAGGTCTTGCCTGCAGCTGGATTTCTATCCCACTTCTGTGATTTTCCTTTCGTGGATCACCAACGCACTGCAAACTCCTATCATTGCTTTTGACATGGTGTACTTTGGTTCTGCCTGGAAAGGCAGGGAGTCTCGGAGTGAGGGGCTCACAGATCATAGGCAGATTGAAATGTTTTCAGCAAGAATAGGCAaacccatagagacagaaagcacacTCATGGTTAGCAGGTGCTGGAGGGAAGAAGGAATGGGGAGTGGCTGCTGACTGGGTGTAGGGTGATGACAATG-TGTGGAACAGGATGGCAGTGATGGTGACACAATGATCTGAGGAGAAGCTAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46992018 575 + 50890351 CTCAGGATCCTCCCTCCAAACATTCTATCCTGTGCAGCAGGGTTTTACATCCTTCCAACACAACAGTGGTCTTTGACCCAGACATGTTGAACTCTTTAGTGCTAGGACTCAAGTCCTCTTGCTGT-GTTGGGACAATTCAGAAAAGAATCAGCCCCAGTCA-TTTTGCATACTTCTGTCTGACTGTCCTAGGTGAGTAGAAAGAAACAGTTCAACTGCTTGACAAGATTCATTGACCTGAGGTCTTGTCTGCAGCTGGATTTCTATCCTACTTCTGTGATTTTCCTTTCATGGATCACCTACACACTGCAAACGCCTATCATTGCTTTTGACATGGGGtactttggttctgcctggaaaggcagggagtcttggagtgaggagctcacagatcataggcagattgaaatgttttcAGCAagaataggcaaagccatagagacagaaagcacactcgtggttagcaggtgctggagggaggaaggaatggggagtggctgctgactgggtgtagggtgatgacaatg-tgtggaacaggatggcagtgatggtgacacaaTGATCTGAGGAGAAGCTGC i chlSab2.chr6 I 126 C 0 s calJac3.chr22 45521774 569 + 49145316 CTCAGGATCCTTCC-CCAAACATTCCATCCTGTGAGGCA--GTTTCACATCCTTCAAACAGAACAATGGT-TTTGACCCAGGAATGTTTAACACTTTAATGCTGGGACTCAAGGCCTCCTGTTGTGTTTGGGAGAAGTCGGAGAAGAATCAGCCCCAGTCATTTTTGCATGTTTCTATCTGACTGTCACAAGTGGGTAGGAAGAAACAGCTCAACTCCTTGACAAGATTCATTGGCCTGAGGTCTTGTCT-CGGCTGGAT-TCTCTCCGACTTCCGTGATTTTCCTTTCGTGGATCAGCAACACACTGTCAATGCCTGTCATTG-TTTTCACATggtgtactttggttctgcctggaaaggcgggacgtcttgaagtgaggagctcacaggtcataggcggattgaaatgttttcAAccagaatatgcaaatccgtagagacagaaagcacactcgtggttaccaggtgctggaggga-gaggaaat-gggagtgacggctgagagggtgtcgggggatgacgatgctgtggaacaggatggcagtgacggtcacacaaTGATCTGAGGAGAACTTAC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19714876 10570 - 122678785 T e rheMac3.chr19 60145665 80755 + 64156825 T a score=3276.000000 s hg38.chr19_GL949747v2_alt 268108 1 + 729520 A s panTro4.chr19 59221926 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56049070 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102835097 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55193578 1 + 59248254 A i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47300559 1 + 51301725 A i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46992593 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45522343 1 + 49145316 A i calJac3.chr22 C 0 C 0 s canFam3.chr1 102774773 1 + 122678785 A i canFam3.chr1 I 797 T 10123 e rheMac3.chr19 60145665 80755 + 64156825 T a score=628125.000000 s hg38.chr19_GL949747v2_alt 268109 270 + 729520 CAGGTAGCATCTGAGAAGGAGGGAAGGGCTTGTAGGGTTTGGAGAGGGTGTCAGGGCATCAGGGTGGATTTATCTTTTCCTGGTTGAAATCTGATA-CTCTCCCATTGATTTAGTTACTGAAGCACGTTTGGAACTCTGAACTGAAGAGATGGAGGCTCAATAAAGCACACCAGGGAGTATGGCAATGAGGAATAAAGAAGACTGTGTTA-CACACCATGGACCAGAGCACACAGATGTGCAGAGGTGTGGATCCAGCCCTGCCATGTGGGA s panTro4.chr19 59221927 271 + 63644993 CAGGTAGCATCTGAGAAGGAGGGAAGGGCTTGTAGGGTTCGGAGAGGGTGTCAGGGCATCAGGGTGGATTTATCTTTTCCTGGTTGAAATCCGATA-CTCTCCCATTGATTTAGTTACTGAAGCGTGTTTGGAACTCTGAACTGAAGAGATGGAGGCTCAATAAAGCACACCAGGGAGTGTGGCAATGAGGAATAAAGAAGACTGTGTTAACACGCCACAGACCAGGCCACACAGATGTGCAGAGGTGTGGACCCAACGCTGCCATGTGGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56049071 271 + 60714840 CAGGTAGCATCTGAGAAGGAGGGAAGGGCTTGTAGGGGTCAGAGAGGGTGTGAGGGCATCAGGGTGGATTTATCTTTTTCTGGTTGAAATCTGACA-CTCCCCCATTGATTTAGTTACTGAAGCACGTTTGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACCAGGGAGTGTGGCAATGAGGAATAAGGAAGACTGTGTTAACACGCCACGGACCAGAGCACACAGGTGTGCAGAGGTGTGGACCCAACGCTGCCATGTGGGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102835098 270 - 106955855 CAGGTAGCATCTGAGAAGGAGGGAAGGGCTTGTAGGGTTCAGAGAGGGTGTCAGGGCATCAGGGTGGATTTATCTTTTCCTGGTTGAAATCCGATA-CTCTCCCATTGATTTAGTTACTGAAGCATGTTTGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACCAGGGAGTGTGGCAATGAGGAATAAGGAAGACTGTGTTA-CACGCCATGGACCAGAGCACACAGGTGTGCAGAGGTGTGGACCCAACGCTGCCATGTGAGA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55193579 271 + 59248254 CAGGTAGCATCTGAGAAGGAGTGAAGGGCTCACAGGGTTCAGAGAGGGTGTCAGAGCATCAGGGTGGATTTATCTTTTCCTGGTGGAAATCCGATATTTTCCCCATTGATTTAGTTACTGAAGCGTGTTTGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACCAGGGAGTGTGGCAATGAGGAATAAAGAAGACTGTGTTA-CGCGCCATGGACCAGAGCACGCAGGTGTGCAGAGCTGTGGAGCCAACGCTGCCGTGTGGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47300560 270 + 51301725 CAGGTAGCATCTGAGAAGGAGGGAAGGGCTCACAGGGTTCAGAGAGGGTGTCAGGGCATCAGGGTGGATTTATCTTTTCCCGGTGGAAATCCGATA-CTTCCCCATTGATTTAGTTACTGAAGCGTGTTTGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACCAGGGAGTGTGGCAATGAGGAATAAAGAAGACTGTGTTA-CATGCCATGGACCAGAGCACGCAGGTGTGCAGAACTGTGGACCCAACGCTGCCGTGTGGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46992594 270 + 50890351 CAGGTAGCATCTGAGAAGGAGGGAAGGGCTCACAGAGTTCAGAGAGGGTATCAGGGCATCAGGGTGGATTTATCTTTTCCTGGTGGAAATCCGATA-CTGCCCCATTGATTTAGTTACTGAAGCGTGTTTGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACCAGGGAGTGTGGCAATGAGGAATATAGAAGACTGTGTTA-CACGCCATGGACCAGAGCACACAGGTGTGCAGAGCTGTGGACCCAACGCTGCCATGTGGGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45522344 270 + 49145316 CAGATAGCATCTGAGAAAGAGGGAAGGGCTCCTAGGGTTTGGAGAGGGTGTTAGGGAGTCAGGGTGGATTCATCTTTTCCTGGTTGAAATTCAATA-CTCTCCCATTGACTTATTTACTGAAGCACGTTTGGAACTCTGAACTGAGGAGATGGAGGCTCAGTAAAGCTCACCAGGTAGTGTGATGATGAGCAGTGAAGAAGACTGTGTTA-CACGCCATGGACCAGAGCACGCAGGTGAGCAGAGGTGCGGACCCGACGCTGCCATGCGGGA i calJac3.chr22 C 0 C 0 e canFam3.chr1 102774774 10123 + 122678785 T e rheMac3.chr19 60145665 80755 + 64156825 T a score=881239.000000 s hg38.chr19_GL949747v2_alt 268379 535 + 729520 TGTAGCCTCATGTCTA----GGGGTGGGAAAAGAAGGGGATCCAACCAAGGGAAGTCAACATTAATAGAGAGGAAAGGTATCACATGTTAATGGTCCTCCATGGATCACCCTGCAAAATATCTCTGCAATCCAACACTGATTCCTCCTTCTAGAAATTATCAGCAGACAGTCCAGATAGCATTGGCCCTAAATTGTCTCCCGGAACCTCCTGGGATCACCATATCTATTCCCAAGGTTCCACCACTCTGAGAGATGCATTGTCCTCTCTGCTGTTCACCTCCTAGCTGCATCTTAGGGGCTTCTCTGGCTGTGCTGAGCCTCAAATAACAGAATCCTGAGGACCACCAGGATCAAGCCAGCCTTGCCCATGTGGATGAGATTCTCCACTGTGTAATCCTGGGGGTGTGAGGTTGGGGATGGTGGGCAAAGAGACCACAGAGGTCAGGGCAGATCAACATCACCCAGGACCTCTGGATGTCCACCCAGGGCACCCACCTCCCCTTCACAGGACCTGACCCTCTGTGCCAGCCCCATAACT s panTro4.chr19 59222198 539 + 63644993 TGTAGCCTCATGTCTATCTGGGGGTGGGGAAAGAAGAGGATCCAACCAAGGGAAGTCAACATTAATAGAGAGGAAAGGTATCACATGTTAATGGTCCTCCATGGATCACCCTGGAAAATATCTCTGCAATCCAACACTGATTCCTCCTTCTAGAAATTATCGGCAGACAGTCCAGATAGCATTGGCCCTAAATTGTCTCCCGGAACCTCCTGGGATCACCATATCTATTCCCAAGGTTCCACCACTCTGAGAGATGCATTGTCCTCTCTGCTGTTCACCTCCTGGCTGCATCTTAGGGGCTTCTCTGGCTGTGCTGAGCCTCAAATAACAGAATCCTGAGGACCACCAGGATCAAGCCAGCCTTGCCCATTTGGATGAGATTCTCCACTGTGTAATCCTGGGGGTGTGAGGTTGGGGATGGTGGGCAAAGAGACCACAGAGGTCAGGGCAGATCAACATCACCCAGGACCTCTGGATGTCCACCCAGGGCACCCACCTCCCTTTCACAGGACCTGACCCTCTGTGCCAGCCCCATAACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56049342 528 + 60714840 TGTAGCCTCAGGTCTG----GGGGTGGGAAAAGAAGGGGATCCAACCAAGGGAAGTCAATATTAATAGAGAGGAAAGGTATCACATGTTAA-------CCTTGGATCACTCCAGAAAATATCTCTGCAATCCAACACTGATTCCGCCTTCTAGAAATGATCGGCAGACAGTCCAGATAGCATTGGCCCTAAATTGTCTCCCAGAACCTCCTGGGATCACCATATCTGTTCCCAAGTCTCCACCACTCTGAGAGGTGCATTGTCCTCTCTGCTATTCACCTCCTGGCTGCATCTTAGGGGCTTCTCTGGCTGTGCTGAGCCTCAAATAACAGAATCCTGAGGACCACAAGGATCAAGCCAGCCATGCCCATGCGGATGAGATTCTCCACTGTGTAATATTGGGGGTgtgaggctggggatggtgggcaaagaggtcacagaggtcagggcagatcaacatcacctaggacctCTGGATGCCCACCCAGAGCACCCACCTCCCCTTCACAGGACCTGACTCTCTGCGCCAACCCCATAACT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55193850 533 + 59248254 TGTAGCCTCATGTCTG----GGGGTGGGAAAAGAAGGGGATTCAACCAAGGGAAGTCAACATTAATAGAGAGGAAAGGTATCACATGTTAATGGTCCTCCATGGATCACCCCGGAAAATGTCTCTGCAATCCAACACTGATTCCTCCTTCTGGAAATGATCGGCAGACAGTCCAGATAGCATTGGCCCTAAATTGTCTCCCGGAACCTCCTGGGATCACCAGATCTATTCCCAAGGCTC--CCACTCTGAGGGGTGCATTGTCCTCTCTGCTGTTCACCTCCCGGCTGCATTTTAGGGGCTTCTCTGGCTGTGCTGAGCCTCAAATAACAGAATCCCGAGGACCACCAGGATCAAGCCAGCCATGCCCATGTGGATGAGATTCTCCAGTGTGTAATCCTGGGGGAATGAGGTGGGAGATGGTGGACAAAGAGGCCGCAGAGGTCAGGGCAGATCAGCAACGCCCAGTACCTCTGGATGTCCACCCAGGGCACCCACCTCCCCTTCACAGGACCTGACCCTCTGTGCCAGCCCCATAACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47300830 527 + 51301725 TGTAGCCTCATGTCTG----GGGGTGGGAAAAGAAGGGGATCCAACCAAGGGAAGTCAACATTAATAGAGAGGAAAGGTATCACATGTTAATGGTCCTCCATGGATCACCCTGGAAAATGTCTCTGCAATCCA------ATTCCTCCTTCTGGAAATGATCGGCAGACAGTCCAGATAGCATTGGCCCTAAATTGTCTCCCAGAACCTCCTGGGATCACCAGATCTATTCCCAAGGCTC--CCACTCTGAGGGTTGCATTGTCCTTTCTGCTGTTCACCTCCCGGCTGCATTTTAGGGGCTTCTCTGGCTGTGCTGAGCCTCAAATAACAGAATCCCGAGGACCACCAGGATTAAGCCAGCCATGCGCATGCAGATGAGATTCTCCACTGTGTAATCCTGGGGGAATGTGGTGGGGGATGGTGGACAAAGAGGCCGCAGAGGTCAGGGCAGATCAGCAACGCCCAGTACCTCTGGATGTCCACCCAGGGCACCCACCTCCCCTTCACAGGACCTGACCCTCTGTGCCAGCCCCATAACT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46992864 517 + 50890351 TGTAACCTCATGTCTG----GGGGTGGGAAAAGAAGGGGATCCAACCAAGGGAAGTCAACATTAATAGAGAGGAAAGGTATCACATGTTAG----------------ATGCTGGAAAATGTCTCTGCAATCCAACACTGATTCCTCCTTCTGGAAATGATCGGCAGACAGTCCAGATAGCATTGGCCCTAAATTGTCTCCCAGAACCTCCTGGGATCACCAGATCTATTCCCAAGGCTC--ACACTCTGAGGGGTGCATTGTCCTTTCTGCTGTTCACCTCCCGGCTGCATTTTAGGGGCTTCTCTGGCTGTGCTGAGCCTCAAATAACAGAATCCTGAGGACCACCAGGATCAAGCCAGCCATGCCCATGCGGATGAGATTCTCCAGTGTGTAATCTTGGGGGAATGAGGTGGGGGATGGTGGACAAAGAGGCCACAGAGGTCAGGGCAGATCAGCATCACCCAGTACCTCTGGATGTCCACCCAGGGCACCCACCTCCCCTTCACAGGACCCGACCCTCTGTGCCATCCCCATAACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45522614 522 + 49145316 TGGAGCCTCATGTCTC----GGGGAGGGACAAGAATCGGACCCAACCAGCGGAAGTCAACATTCATAGAGAGGAAC-GTGTCACATGTGCATGGTCCTCCATGGATCACCCCAGAAATGGTCTCTGT------------ACTTGTCCCTCTAGAAATGATTAACAGACAGTCCAGAAAATGTAGCCCCTAAATTGTCTCCCAAAACATCCTGAGATCATTAGATCTGTTCTCAGGTTTCCAGCACTCTGAAGGCTGCACTGTCCTCTCTGCTGTTCACCTCCTGGCTGCATCCTGGGGGCTTCTCTGGCTGTGCTGAGCCTCAAAGAGCAGAACGCCGAGGACCACCAGGACCAAGCCGGCCACGCCCATGCGGATGAGATTCCCCACTGTGTAATCCTGGGGCTgtgaggctggggatggtgggcaaagaggtcacagaggtcagggaggatcagcatcacccaggacctCTGGATGTCCACCCAGGGCACCCACCTCCCCTTGACAGGACCTGACCCTCTGTGCCAGCCCCATGACC i calJac3.chr22 C 0 I 35729 e canFam3.chr1 102774774 10123 + 122678785 T e nomLeu3.chr10 102835368 0 - 106955855 C e rheMac3.chr19 60145665 80755 + 64156825 T a score=1017393.000000 s hg38.chr19_GL949747v2_alt 268914 707 + 729520 GAAAGCATCTCCTCACGCACCAGTCTTGGGGTCTGAATTGTTTTGTGATGGGCTGAGGGTATCAGCTGCTCCTGAGAATCAAAG--CAAAG--------GAGAAGTACCCTGAGCCAGCCTCTCCCATGGGCTCGGCATTCTTATCTTCCCCTGTCTCC--TGACATGAGTTCTAAGGAGTTCCTTAGTAAACTCTTCCTCTG---TAGCAGTGTTCGTTCCGTTCTTCTTAATGAATTATTTCAGCTTTCCTGCTTTCTACAAATCCAAATGTTGCTCTTGAGTCATTTGGGGGAGAGTTTTCCTTCACCCTGAGGGCTCAGGATCTGCAAGGAAAGTGGTCCCCAGTACAGAGGTCACTGAGC-CCTGTGTGCTGTC-----TGTGCAGCCTGGGAC-ACGGGAGCACATGAGCCAATTCCCCCGGAGATGAGAGTTTCACGGATCCACCAGCTGAGGACCCAGGCTCCCTGGATGAGGGGTTGGTCCTCAGGGGCTCCCGAATGTCAGAAGCACAAAGCGGTGAAAGTCTGGGGCTGCCTCCC-------------------CTTCACCTGGGTTTTCATTGTCCAATTAAT--CTAATTAACTAATTCTTCATATAATCAGGAAA-ACCTAGAATGATGTGATACCTTCCCCCCGGCCCCCATCCAAAAA--TATCT-GTCTGCTAAATAGTGGTGCTATTAGAGGTTCATAAATCAGTATTTCTGCTTTTACAAAGTGTGAATCTAGGT s panTro4.chr19 59222737 708 + 63644993 GAAAGCATCTCCTCACGCACCAGTCTTGGGGTCTGAATTGTTTTGTGATGGGCTGAGGGTATCAGCTGCTCCTGAGAATCAAAG--CAAAG--------GAGAAGTACCCTGAGCCAGCCTCTCCCCTGGGCTCGGCATTCTTATCTTCCCCTGTCTCC--TGACATGAGTTCTAAGGAGTTCCTCAATAAACCCTTCCTCTG---TAGCAGTGTTCGTTCCGTTCTTCTTAATGAATTATTTCAGCTTTCCTGCTTTCTACAAATCCAAATGTTGCTCTTGAGTCATTTGGGGGAGAGTTTTCCTGTAACCCGAGGGCTCAGGATCTGCAGGGAAAGTGGCCCCTGGTACAGAGGTCACTGAGC-CCTGTGTGCTGTC-----TGTGCAGCCTGGGAC-ACAGGAGCACATGAGCCAATTCCCCCGGAGATGAGAGTTTCACGGATCCACCAGCTGAGGACCCAGCCTCCCTGGATGAGGGGTTGGTCCTCAGGGGCTCCCGAATGTCAGAAGCACAAAGCGGTGAAAGTCTGGGGCTGCCTCCC-------------------CTTCACCTGGGTTTTCATTGTCCAATTAAT--CTAATTAACTAATTCTTCATATAATCAGGAAA-ACCTAGAATGATGTGATACCTTCCCCCCGGCCCCCACACAAAAA--TATCTTGTCTGCTAAATAGTGGTGCTATTAGAGGTTCATAAATCAGTATTTCTGCTTTTACAAAGTGTGAATCTAGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56049870 724 + 60714840 GAAAGAATCTGTTCACTCACCAGTCTTGGGGTCTGAATTGTTTTGTGATGGGCTGAGGGTCTCAGCTGCTCCTGAGAATCAAAG--CAAAG--------GAGAAGTACCCTGAGCCAGCCTCTCCCCTGGGCTCAGCATTCTTATCTTCTCCTGTCTCC--TGACATGAGTTCTAAGGAGTTCCTCAATAAACCCTTCCTCTG---TAGCAGTGTTCGCTCCGTTCTTCTTAATGAATTATTTCAGCTTTCCTGTGTTCTACAAATCCAAATGTTGCTCTTGAGTCATTTGGGGGAGAGTTTCCCTGTACCCCGAGGGCTCAGGATCTGCAAGGAAAGTGGTCCCCAGTACAGAGGTCACTGAGC-CCTGTGTGCTCTC-----TGTGCAGCCTGGGAC-ACAGGAGCACATGAGCCAATTCCCCCGGAGATGAGAGTTTCACGGATCCACCAGCTGAGGACCCAGGCTCCACGGATGAGAGGTTAGTCATCAGGGGCTCCTGAATGTCAGAAGCACAAAGCGGTGAAAGTCTGGGGCTGCCTCCCCTTCATGC--CCTGAGCCACTTCACCTGGGTTTTCATTGTCCAATTAAT--CTAATTAACTAATTATTCACATAATCAGGAAA-ACCTAGAATGATGTGATACCTTCCCCCCTGCCCCCACACACAAA--TATCT-GTCTGCTAAATAGTGGTGCTATTAGAGGTTCATAAATCAGTATTTCTGCTTTTACAAAGTGTGAAGCTAGGT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55194383 717 + 59248254 GAAAGCATCTCCTCACTCACCAGTCTTGGGGTCTGAATTGTTTTGTGATGGGCTGAGGGTCTCAGCTGCTCCTGAGGATCAAAA--CAAAG--------GAGAAGTACCCTGAGCCAGCCTCTCTCCTAGGCTCTGCATTCTTATCTTCCCCTGTCTTC--TGACACGAGTTCTAGTGAGTTCCTCAGTAAACCCTTCCTCTG---TAGCAGGGTTTCCTCCAGTCTCCTCATGGAACTATTTCAGCTTTCCTGTGTTCTACAAATCCAAACATTGCTCTTGAGTCATTTGG--GAGAGTTTTCCTGTACCCCAAGGGCTCAGGATCTGCAAGGAAAGT-GTCCCCAGTATAGAAATCACTGAAC-CCTGTGTACTGTC-----AGTGCAGCCTGGGAC-ACAGGAGCACATGAACCAATTCCCCTGGAGATGAGAGTTTCACAGATCCACCAGCTGAGGACCCAGGCTCCGTGCATGAGGGGTTGGTCCTCAGGGGCGCCTCAATGTCAGAAGCAGAAAGGGGTGAAAGTCTGGGGCTGCCTTCCCTTCATGC--CCTCAGCCACTTCACCTGGGTTTTCAATGTCCAATTAAT------CTAACTAATTCTTCATATAGTCAGGAAA-ACCTAGAATGATGTGATACCTTCCCCTCCATCCCCACTCACAAA--CATCT-GTCTGCTAAATAGTGGTGCTATTAGAGGTTCATAAATCAGTATTTCTGCTTTTACAAAGTGCGAATCTAGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47301357 723 + 51301725 GAAAGCATCTCCTCACTCACCAGTCTTGGGGTCTGAATTGTTTTGTGATGGGCTGAGGGTCTCAGCTGCTCCTGAGAATCAAAA--CAAAG--------GAGAAGTACCCTGAGCCAGCCTCTCTCCTAGGCTCTGCATTCTTATCTTCCCCTGTCTTC--TGACATGAGTTCTAGTGAGTTCCTCAGTAAACCCTTCCTCTG---TAGTAGGGTTCCCTCCAGTCTCCTCATGGAACTATTTCAGCTTTCCTGTGTTCTACAAATCCAAACGTTGCTCTTGAGTCATTTGGGAGAGAGTTTTCCTGTACCTCAAGGGCTCAGGATCTGCAAGGAAAGT-GTCCCCAGTACAGAAATCACTGAGC-CCTGTGTGCTGTC-----AGTGCAGCCTGGGAC-ACAGGagcacatgagccaattcccccGGAGATGAGAGTTTCACGGATCCACCAGCTGAGGACCCAGGCTCCGTGCATGAGGGGTTGGTCCTCAGGGGTGCCTCAATGTCAGAAGCAGAAAGGGGTGAAAGTCTGGGGCTGCCTTCCCTTCATGC--CCTTAGCCACTTCACCTGGGTTTTCAATGTCCAATTAAT--CTAACTAACTAATTCTTCATATAGTCAGGAAA-ACCTAGAATGATGTGATACCTTCCTCTCCATCCCCACTCACAAA--CATCT-GTCTGCTAAATAGTGGTGCTATTAGAGGTTCATAAATTAGTATTTCTGCTTTTACAAAGTGCGAATCTAGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46993381 719 + 50890351 GAAAGCATCTCCTCACTCACCAGTCTTGGGGTCTGAGTTGTTTTGTGATGGGCTGAGGGTCTCAGCTGCTCCTGAGGATCAAAA--CAAAG--------GAGAAGTACCCTGAGTCAGCCTCTCTCCTAGGCTGTGCGTTCTTATCTTCCCCTGTCTTC--TGACACGAGTTCTAGTGAGTTCCTCAGGAAACCCTTCCTCTG---TAGCAGGGTTCCCTCCAGTCTCCTCATGGAACTATTTCAGCTTTCCTGTGTTCTACAAATCCAAATGTTGCTCTTGAGTCATTTGGGAGAGAGTTTTCCTGTACCCCAAGGGCTCAGGATCTGCAAGGAAAGT-GCCCCCAGTACAGAAATCACTGAGC-CCTGTGTGCTGTC-----GGTGCAGCCTGGGAC-ACAGGAGCACATGAGCCAATTCCCCCGGAGATGAGAGTTTCACGGATCCACCAGCTGAGGACCCAGGCTCCATGCATGAGGGGTTGGTCCTCAGGGGCGCCTCAATGTCAGAAGCAGAAAGTGGTGAAAGTCTGGGGCTGCCTCCCCTTCATGC--CCTCAGCCACTTCACCTGGGTTTTCAATGTCCAATTAAT------CTAACTAATTCTTCATATAATCAGGAAA-ACCTAGAATGATGTGATACCTTCCCCTCCATCCTCACTCACAAA--CATCT-GTCTGCTAAATAGTGGTGCTATTAGAGGTTCATAAATCAGTATTTCTGCTTTTACAAAGTGCGAATCTAGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45558865 718 + 49145316 GAAAGCATCTCCTCACTCACCAGTCTTGGAATCTGACTTTTTTTGTGGTGGGTTGAGGGTCTCAGCTGCTCCTAAGAATCAAAGAACAAGGATGTTGGTGAGAAG----CTGAAG-AGCCTCTCCCCTGGGTTCTGCATTCTTACATTCCTCTGTCTCTTGTGTCGTGACTT-TATGTAGATCCTTAGTGAACACAATCTCTGCTCTAGCAGGCCTTCCCTCGTAC--CTCATTGGGTT-CTTCAGCCTCTCTGTGCTCTGGGAATTCAGATCTTGTGTCTGAGTCACTTTGGAATAAAGTTTACTTGAGCCCAAGAGCTCAAGATTAGTGAGAAGAATGATCTCCCAACTAGAAAGAATTGAGCTCTTAAGTGCTGTCTTAGATGTGTAATCTTGTGCAACAGGAACAC---AACAAATTCCCCCAGAGATAGAAGTTTCCATTTTTCAGTGGATGAGGACCCAGGCTCCGTGGACAAGGAGCTGGTCCTCAGCTGCTCTTGAAAGTCAGGAGCAGGAG--GGCTGAGGGCTGCCACTGCCTCTGCTTCGTGCTGCCTCAGCCAGCTCCCCTGGGGTTTCCTTAACCATTTAATGTCTCGTTAACTGACTCTTCATATAGTTAAGAACTATCTACA---ATGTGATATA--------------AATACAAAAATGTATTT-TTTTTCTAAATGATAATG----GGTGGGATAGAAAAACATCATTTCTGCTTTTTTGAAGTATGAACCTAGAT i calJac3.chr22 I 35729 T 748 e canFam3.chr1 102774774 10123 + 122678785 T e nomLeu3.chr10 102835368 0 - 106955855 C e rheMac3.chr19 60145665 80755 + 64156825 T a score=265440.000000 s hg38.chr19_GL949747v2_alt 269621 242 + 729520 GAATCTAGACCAGTAACAAACATGTAAACTCCTACCACATCAAATGTCttatttatttatttattatttttattatttatttatttatttattgaggcagagtcttgctctgttgctcaggctggagtgcagtggtgtgatctcggctcactgcaagctccgtctcctgggttcaagcaattctcctg-ccccagcatcccgagtagctgggattacaggtgcacgccaccacgcccagctac s panTro4.chr19 59223445 234 + 63644993 GAATCTAGACCAGTAACAAACATGTAAACTCCTACCACATCAAATGTCttatttatttatttattatttttattatttatttatt--------gaggcagagtcttgctctgttgctcaggctggagtgcagtggtgtgatctcagctcactgcaaccttcgcctcccgggttcaagcaattctcctg-ccccagcatcccgagtagctgggattacaggtgcacgccaccacgcccggctac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56050594 222 + 60714840 GAATCTAGACCAGTAACAAACATGTAAACTCCTACCACATCAAATGTCttatttatttat------------ttatttatttatt--------gaggcggagtcttgctctgttgctcaggctggagtgcagtggtgtgatcttagctcactgcaacctttgcctcccgggttcaaacaattcttctg-ccccagcatcccgagtagctgggattacaggtgcacaccaccacgcccggctaa i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55195100 226 + 59248254 GAATCTAGACCAGTAACAAACATGTAAACTCCCACCACACAAAATATCtt-tttatttatttat--------ttacttatttatt--------gagatggagtctctctctgtttcccaggctggagtgcagtggcatgatctcagctcactgcaacctccgcctcccaggttcaagcaattctcctgcccccagcgtcccaagtagctgggatgacaggtgcgtgccaccacccccagctaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47302080 226 + 51301725 GAATCTAGACCAGTAACAAACATGTAAACGCCCACCacacaaaatatctt-tttatttatttat--------ttacttatttatt--------gagatggagtctcgctctgtttcccaggctggagtgcagtggcatgatctcagctcactgcaacctccgcctcccaggttcaagcaattctcctgcccccagcgtcccaagtagctgggatgacaggtgcgtgccaccacccccagctaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46994100 226 + 50890351 GAATCTAGACCAGTAACAAACATGTAAACTCCCACCACACAAAATATCtt-tttatttatttat--------ttacttatttatt--------gagatggagtctcgctctgtttcccaggctggagtgcagtggcatgatctcagctcactgcaacctccgcctcccaggttcaagcaattctcctgcccccagcgtcccaagtagctgggatgacaggtgcgtgccaccacccccagctaa i chlSab2.chr6 C 0 I 2399 e canFam3.chr1 102774774 10123 + 122678785 T e calJac3.chr22 45559583 748 + 49145316 T e nomLeu3.chr10 102835368 0 - 106955855 C e rheMac3.chr19 60145665 80755 + 64156825 T a score=273.000000 s hg38.chr19_GL949747v2_alt 269863 1 + 729520 t s panTro4.chr19 59223679 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56050816 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102774774 10123 + 122678785 T e calJac3.chr22 45559583 748 + 49145316 T e nomLeu3.chr10 102835368 0 - 106955855 C e chlSab2.chr6 46994326 2399 + 50890351 I e papAnu2.chr19 47302306 0 + 51301725 C e macFas5.chr19 55195326 0 + 59248254 C e rheMac3.chr19 60145665 80755 + 64156825 T a score=358705.000000 s hg38.chr19_GL949747v2_alt 269864 306 + 729520 ttttttgtatctttagtagagat-ggcggtttcaccatgttggccaggctggtgtcgaactcctgacctcatgatcctcccacctcggcctcccaaagtgctgagattgtaggcatgagccactgtgcccggccTAtttttatttttattgagatggagtctcactctgtcgcacaggttggagtgcagtggcactatctcggttcattgcaacctctgccgcccgggttc---aagtgattcttgtgcttcagcctccctagtatctgggactacagggccgcaccaccatgcctggctaatttt-----tttt s panTro4.chr19 59223680 306 + 63644993 ttttttgtatctttagtagagat-gggggtttcaccatgttggccaggctggtctcgaactcctgacctcatggtcctcccacctcggcctcccaaagtgctgagattgtaggcatgagccactgtgcccggccTAtttttatttttattgagatggagtctcactctctcgcacaggttggagtgcagtggcactatctcggttcattgcaacctctgccgcccgggttc---aagtgattctcgtgcttcagcctccctagtatctgggactacagggccgcgccaccatgcctggctaatttt-----tttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56050817 307 + 60714840 ttttttgtatctttagtagagatggggggtttcaccatgttggccaggctggtctcgaactcctgacctcatgatcctcccacctcggcctcccaaagtgctgagattgtaggcatgagccaccgtgcccagccTAtttttatttttattgagatggagtctcactctgtcgcacaggttggagtgcagtagcgttatctcggttcattgcaacctctgccgccagggttc---aagtgattctcatgcttcagcctccctagtagctgggactacaggggtgcgccagcatgtctggctaatttt-----tttt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55195326 307 + 59248254 ttttttgtatctttagtagagat--ggggtttcaccatgttggccaggctggcctcgaactctctacctcatgatccttctgcctcagcctcccaaagtgctgggattacaggcatgagctaccgcaccaggccTAtttttatttttattgagatggaatctcactcagtcgcataggctggagtgcagtggcgctctcttggctcattgcaacctctgccgcctgggttcatgaggtgattctcatggttcagcctcctgagtagctggcactacaagggtgtgccaccatgcccagctattttt-----ttt- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47302306 312 + 51301725 ttttttgtatctttagtagagat--ggggtttcaccatgttggccaggctggcctcgaactcttgacctcatgatccttctgcctcagcctcccaaagtgctgggattataggtgtgagccaccgcaccaggcctatttttatttttattgagatggaatctcactcagtcgcacaggctggagtgcagtggcgctctctttgctcattgcaacctctgccgcctgggttcatgAGGTGATTCTCATggttcagcttcctgagtagctggcactacaggggtgtgccaccatgcccagctatttttttttgttt- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46996725 307 + 50890351 ttttttgtatctttagtagagat--ggggtttcaccatgttggccaggctggcctcgaactcttgacctcatgatccttctgcctcagcctcccaaagtgctgggattataggtgtgagccaccgcaccaggccTAtttttatttttattgagatggaatctcactcagtcgcacaggctggagtgcagtggcgctctctttgctcattgcaacctctgctgcctgggttcatgaggtgattctcatggttcagcctcctgagtagctggcactacaggggtgtgccaccatgcccagctattttt-----ttt- i chlSab2.chr6 I 2399 C 0 e canFam3.chr1 102774774 10123 + 122678785 T e calJac3.chr22 45559583 748 + 49145316 T e nomLeu3.chr10 102835368 0 - 106955855 C e rheMac3.chr19 60145665 80755 + 64156825 T a score=657768.000000 s hg38.chr19_GL949747v2_alt 270170 383 + 729520 tgtatttttagtagagatgggcttttaccatgttggccaggctggtatcaaactcctgacctcaggtgatctgcccgccttggcctcccaaagtgctgggattacaggcatgagtcactgcgcctggccATCAAATATATTAAGAATATGGAT--ATATTTATCAAGTGAACTTGGAAATACTTACACACATATTCAAATGTAACTTATATAACCACACAT-AAATATGTATAGATGTAAAACTTTAGATATTTA----AGATGTAGTTACATACATATTGATATTTGAAGTGAGAA-TATTGGCAAGCAATATAGAAAT----AAGTAAAATCTCCATTGTCTCATGGTTTGTATACATTTCATCAGGAAATTAGAGGAGATCCATAGAAAAGC s panTro4.chr19 59223986 388 + 63644993 tgtatttttagtagagatgggcttttaccatgttggccaggctcgtatcaaactcctgacctcaggtgatctgcccgccttggctccccaaagtgctgggattacaggcatgagtcaccacgcctggccATCAAATATATTAAGAATATGGAT--ATATTTATCAAATGAACTTGGAAATACTTACACACATATTCAAATGTAACTTATATAACCACACAT-AAATATGTATAGATGTAAAACTTTAGATATTTATTTAAGATGTAGTTACATACATATTGATATTTGAAGTGAGAAATATTGGCAAGCAATATAGAAAT----AAGTAAAATCTCCATTGTCTCATGGTTTGCATACATTTTATCAGGAAATTAGAGGAGATCCATAGAAAAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56051124 388 + 60714840 tgtatttttagtagagatgggcttttaccatgttggccaggctggtatcaaactcctgacctcaggtgatctgcctgctttggcctcccaaagtgctgggattacaggcgtgaatcaccgcgcccggccATCAAATATATTAAGAatatggat--atatatatcaaatgaacttggatatacctacacacatattcaaatgtaacttatataaccacacat-aaatatgtatagatataaaactttagatatttatttaagatgtagttacatacatattgatatTTGAAGTGAGAAATATTGGCAAGCAATATAGAAAT----AAGTAAAATTTCCTTTGTCTCATGGTTTGTATACATTTTATCAGGAAATTAGAGGAGATCCATAGAAAAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102835368 386 - 106955855 tgtatttttagtagagacggatttttaccatgttggccaggctggtatcaaactcctgacctcaggtgatctgcccgccttggcctcccaaagtgctgggattacaggcgttagtcaccaggcccgaccATCAG--ATATTAAGAATATGGAT--ATATATATCAAATGAACTTGGATATACCTACACACATATTCAAATGTAACTTACATAACCACACAT-AAATATGTATAGATATAAAACTTTAGATATTTATTGAAGATGTAGTTACATACATATTGATATTTGAAGTGAGAAATATTGGCAAGCAATATAGAAAT----AAGTAAAATTTCCATTGTCGCATGGTTTGTATACATTTTATCAGGAAATTAGAGGAGATCCATAGAAAAGC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55195633 384 + 59248254 tgtatttttagtagagacgagctttta---------ccaggctggtatcaaactcctgacctcaggtgatctgcccgccttggcctcccaaagtgctgggattacaggcgtgagtcaccgtgcccggccATCAAATATATTAAGAATATGGATGAATACATATCAGATGAACTTGGATATGCCTACACACATACTCAAATGTAACTTATATAACCACACAT-AAATATGTATAGATATAAAGCTTTAGATATTTATTTAAGATGTA-TTACATACATATTGGTATTTGAAGTGAGAAATATTGGCAAGCAATATAGAAGTAAAGAAGTAAAATTTCCGTTGTCTCATGGTTTGTATAAATTTTATCAGGAAATTAGAGGAGATCCATAGAAAAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47302618 385 + 51301725 tgtatttttagtagagacaagctttta---------ccaggctggtatcaaactcctgacctcaggtcatctgcccgccttggcctcccaaagtgctgggattacaggcgtgagtcaccatgcctggccatcaaATATATTAAGAATATGGATGAATATATATCAGATGAACTTGGATATGCCTACACACATACTCAAATGTAACTTATataaccacacataaaatatgtatagatATAAAGCTTTAGATATTTATTTAAGATGTA-TTACATACATATTGGTATTTGAAGTGAGAAATATTGGCAAGCAATATAGAAGTAAAGAAGTAAAATTTCCGTTGTCTCATGGTTTGTATAAATTTTATCAGGAAATTAGAGGAGATCCCTAGAAAAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46997032 384 + 50890351 tgtatttttagtagagatgagctttta---------ccaggctggtatcaaactcctgacctcaggtgatctgcccgccttggcctcccaaagtgatgggattacaggcgtgagtcaccatgcctggccATCAAATATATTAAGAATATGGATGAATATATATCAGATGAACTTGGATATGCCTACACACATACTCAAAAGTAACTTATATAACCACACAT-AAATACGTATAGATATAAAGCTTTAGATATTTATTTAAGATGTA-TTACATACATATTGGTATTTGAAGTGAGAAACATTGGCAAGCAATATAGAAGTAAAGAAGTAAAATTTCCGTTGTCTCATGGTTTGTATAAATTTTATCAGGAAATTCGAGGAGATCCATAGAAAAGC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102774774 10123 + 122678785 T e calJac3.chr22 45559583 748 + 49145316 T e rheMac3.chr19 60145665 80755 + 64156825 T a score=454162.000000 s hg38.chr19_GL949747v2_alt 270553 216 + 729520 AATTAGAATGGGGTAATTTGGTAGTGAGTTAGCATGAAATACAATGAATATACTCAAACGAGTAGCTTTCTCATGGATAATTATCTTTTATTTTTAAAATATGAAAGAATAAAGTACTTCACATATACATTGTTAAAGGTGTTGAATAATTCTTCAAGTTGGAATGAATATAATTCTTCAAATGTCCACCCAGGACACCCAGCTCCTCTTGACAGG s panTro4.chr19 59224374 216 + 63644993 AATTAGAATGGGGTAATTTGGTAGTGAGTTAGCATGAAATACAATGAATATACTCAAACGAGTAGCTTTCTCATGGATAATTATCTTTTATTTTTTAAATGTGAAAGAATAAAGTACTTCACATATACATTGTTAAAGATGTTGAATAATTCTTTAAGTTGGAATGAATATAATTCTTCAAATGTCCACCCAGGACACCCAGCTCCTCTTGACAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56051512 216 + 60714840 AATTAGAATGGGGTAATTTGGTAGGGAGTTAGCATGAAATACAATGAATATACTCAAACCAGTAGCTTTCTCAGGGATAATTATCTTTTATTTTTAAAATATGAAAGAATAAAGTACTTCACATATACATTGTTAAAGGTGTTGAATAATTCTTTAAGTTGGAATGAACATAATTCTTCAAATGTCCACCCAGGACACCCAGCTCCCCTTGACAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102835754 209 - 106955855 AATTAGAAGGGGGTAATT-------GAGTTAGCATGAAATACAATGAATATACTCAAACCAGTAGCTTTCTCATGGATAATTATCTTTGATTTTTAAAATATGAAAGAATAAAGTACTTCACACATACATTGTTAAAGGTGTTGAATAATTCTTTAAGTTGGAATGAACGTAATTCTTCAAATGTCCACCCAGGACACCCAGCTCCCCTTGACAGG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55196017 214 + 59248254 AGTGAGAATGGGGTCATTTGGTAGTGAGTTAGCACGAAACACAATGAATATACTCAAACT--CAGCTTTCTCATGGATAATTACCTTTTATTTTTAAAATATGAAAGAATAAAGTACTTCACTTATAAATTGTTAAAGGTGTTGAATAATTCTTTAAGTTGGAATGAACATAATTCTTCAAATGTCCGCCCAGGACACCCAGCTCCCCTTGACAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47303003 214 + 51301725 AGTGAGAATGGGGTTATTTGGTAGTGAGTTAGCATGAAACACAATGAATATACTCAAACT--CAGCTTTCTCATGGAtaattaccttttatttttaaaatatgaaagaataaagTACTTCACTTATAAATTGTTAAAGGTGTTGAATAATTCTTTAAGTTGGAATGAATATAATTCTTCAAATGTCCGCCCAGGACACCCAGCTCCCCTTGACAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46997416 213 + 50890351 AGTGAGAATGGGGTCATTTGGTAGTGAGTTAGCACGAAACACAATGAATATACTCAAACT--CAGCTTTCTTATGGATAATTACCTTTTATTTTTAAAATATAAAAGAATAAAGTACTTCACTTATAAGTTGTTAAAGGTGTTGAATAATTCTTTAAGTTGAAATGAATATAATTCTTCAAATGTCCACCCAGGACGCCCAGCT-CCATTGACAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3621803 216 - 49145316 AATTAGAAGGGGACAATTTGGTAGTGAGTTAATAAGAAATACAATTAATATACCCAGACCAGTAGCTTTCTCATGGACACTTATCTCTTGTTTAAAAAATACAAAGGAATCAAATATTTCCCTTAAAAATTGTTAAAGGTGTTGATTGATTCTTTTGATTACAATGAACATAAGTTTTTAAATGTCTACCCAGGACACCCACCTGTTGTTGACAGG i calJac3.chr22 n 748 T 39011 e canFam3.chr1 102774774 10123 + 122678785 T e rheMac3.chr19 60145665 80755 + 64156825 T a score=66649.000000 s hg38.chr19_GL949747v2_alt 270769 30 + 729520 ACCTGACCCTCTGTGCCCAGCGTCATCACG s panTro4.chr19 59224590 30 + 63644993 ACCTGACCCTCTGTGCTCAGCGTCATCACG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56051728 30 + 60714840 ACCTGACCCTCTGTGCCCAGCGTCATCACG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102835963 30 - 106955855 ACCTGACCCTCTGTGCCCAGCGTCATCACC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55196231 30 + 59248254 ACCTGACCCTCTGCGCCCAGCGTCTTCACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47303217 30 + 51301725 ACCTGACCCTCTGCGCCCAGCGTCTTCACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46997629 30 + 50890351 ACCTGACCCACTGCGCCCAGCGTCATCACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45558835 30 + 49145316 ACCTGACCCTCTGTGCCCAGCCCCATAACT i calJac3.chr22 T 748 T 35729 e canFam3.chr1 102774774 10123 + 122678785 T e rheMac3.chr19 60145665 80755 + 64156825 T a score=274413.000000 s hg38.chr19_GL949747v2_alt 270799 124 + 729520 GCAAGCATCTCCTCACTCACCAGCCTTGGAGTCGGACTTGTTTTGTGGTGGGCTGAGGGTCTCAGCTGCTCCTGAGAATCAAAACAGAGGAGAAGAGACATATTCAGAGGTAACTCATATGACA------------ s panTro4.chr19 59224620 124 + 63644993 GCGAGCATCTCCTCACTCACCAGCCTTGGAGTCGGACTTGTTTTATGGTGGGCTGAGGGTCTCAGCTGCTCCTGAGAATCAAAACAGAGGAGAAGAGGCATATTCAGAGGTAACTTATATGACA------------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56051758 124 + 60714840 GCGAGCATCTCCTCACTCACCAGCCTTGGAGTCGGACTTGTTTAGTGGTGGGCCGAGGGTCTCAGCTGCTCCTGAGAATCAAAACAGAGGAGAAGAGACATATTCAGAAGTAACTTATATAACA------------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102835993 121 - 106955855 GCAAGCATCTCCTCACTCACCAGCCTTGGAGTCGGACTTGTTTTGTGGTGGGCTGAGGGTCTCAGCTGCTCCTGAGAATCAAAACA---GAGAAGAGACATATTCAGAGGTAACTTATATAACA------------ i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55196261 122 + 59248254 GCGAGCGTCTCCTCACTCGCCGGCCTTGGAGTCGGACTTGGTTTGTGGTGGGCTGAAGGTCTCAGCTGCTCCTGAGAATCAAAACAGAGGAGAAGAGAC--ATTCAGATGTAACTTATATAACA------------ i macFas5.chr19 C 0 I 102 s papAnu2.chr19 47303247 122 + 51301725 ACGAGCGTCTCCTCACTCGCCGGCCTTGGAGTTGGACTTGGTTTGTGGTGGGCTGAAGGTCTCAGCTGCTCCTGAGAATCAAAACAGAGGAGAAGAGAC--GTTCAGATGTAACTTATATAACA------------ i papAnu2.chr19 C 0 I 102 s chlSab2.chr6 46997659 122 + 50890351 GCGAGCATCTCCTCACTCGCCGGCCTTGGAGTCGGACTTGGTTTGTGGTGGGCTGAAGGTCTCAGCTGCTCCTGAGAATCAAAACAGAGGAGAAGAGAC--ATTCAGATGTAACTTATATAACA------------ i chlSab2.chr6 C 0 I 102 s calJac3.chr22 45523136 136 + 49145316 GCGAGCATCTCCTCACTCACCATCCTGGGAGTGGGACTTGTTTTGTGATGGGCTGAGGGTCTCAGCTGCTCCTGAGAATCAAAATCAGGGAGAAGAGACATATTTAAATGTAACTTATATAACAGGCTGtatataa i calJac3.chr22 T 35729 C 0 e canFam3.chr1 102774774 10123 + 122678785 T e rheMac3.chr19 60145665 80755 + 64156825 T a score=758745.000000 s hg38.chr19_GL949747v2_alt 270923 372 + 729520 AATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCAACACCTTTGACAACTTATAAGTGAAGTATTTGATTCCTTTATATTTTTTAAACAAAAGATAAGTACCCATGAGAAAGCTACTGGTTTGGGTATATTCATTGTATTTCATATTAACTTATTACCAAATTGCCCTCTTCTGATTTAAATTTAAATTAACAATTTTAAAGCATCTCTTTTTCCTATAAAAGAGGTTTAGTTAGATGTTAGAATTATCCAGTGATTGGACAACATTGGACATGAAC-CC-CCC-AGGCCCAGAGCTGGGCTGCACTGTAGCCCCCGCTGACCTCCCCCGGGTTTCCCATGCCACAGGGAGCCGCCCAGTCAGTTTCCCT-CAGGCCACTGTGCTTTAAAACATCCAAACAC s panTro4.chr19 59224744 463 + 63644993 AATTCTATATAAGGCTATATAACCTCCCTG----------------------------------------------------------------------TCAAGGAGAGGTGGGGGTCTTGGGGAGACATTTACAAAA--------------------------------TTATGTTCATC-TAATTTAAAGAATTACTCAACACCTTTGACAACTTATAAGTGAAGTATTTGATTCCTTTATATTTTTTAAACAAGAGATAAGTACCCATGAGAAAGCTACTGGTTTGAGTATATTCATTGTATTTCATATTAACTTATTACCAAATTGCCCTCTTCTGATTTAAATTTAAATTAACAATTTTAAAGCATCTCTTTTTCCTATAAAAGAGGTTTAGTTAGATGTTAGAATTATCCAGTGATTGAACAACATTGGACATGAAC-CCACCC-AGGCCCAGGGCTGAGCTGCACTGTAGCTCCCGCTGACCTCCCCCGGGTTTCTCATGCCACAGAGAGCCCCCCGGTCAGTTTCCCT-CGGGCCATTGTGCTTTAAAACATCCAAACAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56051882 463 + 60714840 AATTCTATATAAGGCTATATAACCTCCCTG-----------------------------------TCAAGGAGAGGTGGGGGTCTTGGGTAGACATTTAA-----------------------------------AGAA--------------------------------TTATGTTCATC-TAATTTAAAGAATTATTCAACACCTTCGACAACTTATAAGTGAAGTATTTGATTCCTTTATATTTTTTAAACAAGAGATAAGTACCCATGAGAAAGCTACTGGTTTGGGTATATTCATTGCATTTCATATTAACTCATTACCAAATTGCCCTCTTCtaatttaaatttaaattaacaattttaaaGCATCTCTTTTTCCTATAAAAGAGGTTTAGTTCGATGTTAGAATCATCCAGTGATTGGACAAGATTGGACATGAAC-CCACCC-CGGCCCAGGGCTGAGCTGCACTGTAGCCCCCGCTGACCTCCCCCGGGTTTCACATGCCACAGGGAGCCGCCCGGTCAGTTTCCCT-CGGGCCATTGTGCTTTAAAACATCCAAACAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102836114 464 - 106955855 AATTCTATATAAGGCTATATAACCTCCCTGTCAAGGAGAGGTGGGGGTCTTGGGTAGACATTTAA----------------------------------------------------------------------AAAA--------------------------------TTATGTTCATC-TAATTTAAAGAATTATTCAACACCTTTGACAACTTATAAGTGAAGTATTTGATTCCTTTATATTTTTTGAACAAGAGATAAGTACCCATGAGAAAGCTACTGGTTTGGGTATATTCATTGTATTTCACGTTAACTCACTACCAAATTGCCCTCTTCTAATTTAAATTTAAATTAACAATTTTAAAGCATCTCTTTTTCCTATAAAAGGGGCTTATTTAGATGTTAGAATCATCCAGTGATTGGACAAGATAGGACATGAACGCCCCCC-AGGCCCAGGGCTGAACTGCACTGTAGCCCCCGCTGACCTCCCCCGGGTTTCACATGCCACAGGGAGCCGCCCGGTCAGTTTCCCT-CGGGCCACTGTGCTTTAAAACATCCAAACAC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55196485 373 + 59248254 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTATTCAACACCTTTGACAATTTATAAGTGAAGTATTTGATTCTTTCATATTTTTTAAACAAGAGGTAAGTACCCATGAGAAAGCTACTGGTTTGGGTATATTCATTGTATTTCGTATTAACTCACTACCAAATTGCCCTCTTCTAATTTAAATTTAAATGATCAAATTTAAAGCACCTCCTTTTCCTATAAAAGAGGTTTATTTAGATGTTAGAATCATGCAGTGATTGGACAAGATTGGACATGAAC-CCACCC-GGGCCCAGGGTTGAGCTGCACTGCAGCCCCCGCTGACCTCCCGCGGGTTTCACGAGCCACACGGAGCCCCCCGGTCAGTTTCCCT-GGGGCCACTGTGCTTTGAAACATCCAAACAC i macFas5.chr19 I 102 I 810 s papAnu2.chr19 47303471 365 + 51301725 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aattatTCAACACCTTTGACAATTTATAAGTAAAGTATTtgattctttcatattttttaaacaagaggTAAGTACCCATGAGAAAGCTACTGGTTTGGGTATATTCATTGTATTTCATAGTAACTCACTACCACATTGCCCTcttctaatttaaatttaaattatcaaatttaAAGCACCTCCTTTTCctataaaagaggtttatttagatGTTAGAATCATGCAGTGATTGGACAAGATTGGACATGGAC-CCACCC-AGGCCCAGGGCTGAGCTGCACTGCAGCCCCCGCTGACCTCCCGTGGGTTTCACGAGCCACACGGAGCCCC--------TTTCCCT-GGGGCCACTGTGCTTTGAAACATCCAAACAC i papAnu2.chr19 I 102 I 809 s chlSab2.chr6 46997883 373 + 50890351 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTATTCAACACCTTTGACAATTTATAAGTGAAGTATTTGATTCTTTCATATTTTTTAAACAAGACGTAAGTGCCCATGAGAAAGCTACTGGTTTGGGTATATTCATTGTATTTCATATTAACTCACTACCAAATTGCCCTCTTCTAATTTAAATTTAAATTATCAAATTTAAAGCACCTCCTTTTCCTATAAAAGAGGTTTATTTAGATGTTAGAATCATGCAGTGATTGGACAAGATTGGACATGAAC-CCACCC-GGGCCCAGGGTTGAGCTGCACTGCAGCCCCCGCTGACCTCCCGTGGGTTTCATGAGCCACATGGAGCCCCCCGGTCAGTTTCCCT-TGGGCCACTGTGCTTTGAAACATCCAAACAC i chlSab2.chr6 I 102 I 816 s calJac3.chr22 45523272 461 + 49145316 aattatatat-agattatataaCCTCCCTGTCA------------------------------------------------------------------------------------------------------ACAACAGGTGGGTGTCCTGGGTAGACATTTAAAAACTTATGTTCATTGTAATCAAAAGAATCAATCAACACCTTTAACAATTTTTAAGGGAAATATTTGATTCCTTTGTATTTTTTAAACAAGAGATAAGTGTCCATGAGAAAGCTACTGGTCTGGGTATATTAATTGTATTTCTTATTAACTCACTACCAAATTGTCCCCTTCTAATTTAAATTTAAATCAACAATTTTAAAGCACTT--TTTTCATATACAAGAGGTTTAGTTGGATGTTAGAGTCATCCAGTGATTGGACAAGATTGGACAGGAAC-CCCCCCAAGGCCCAGGGCTGAGCTGCACTGCAGCCCCTGCTGACA-CCCGAAGGTTTCACATGCAACAGAG-GCCGCTTGGTCAGTTTGCTTATTGGCCATTGTGCTTTGACACATCCAAACAC i calJac3.chr22 C 0 I 783 e canFam3.chr1 102774774 10123 + 122678785 T e rheMac3.chr19 60145665 80755 + 64156825 T a score=149722.000000 s hg38.chr19_GL949747v2_alt 271295 290 + 729520 Agccgggcgcggtggctcacgcctataatctcagcactttgggaggctgaggcgggcacatcacaaggtcaggagatcgagaccatcatggttaacacagtgaaaccctgtctctactaaaaatataaaaaattagctgggcgtggtggtgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacctgggagacggaggttgcagtgagccgagatcgtgccactgcactccagcctgggagacagagcgagactccgtctcaaaaaaaaa s panTro4.chr19 59225207 290 + 63644993 Agccgggcgcggtggctcacgcctgtaatctcagcactttgggaggccgaggcgggcacatcacaaggtcaggagatcgagaccatcgtggttaacacagtgaaaccctgtctctactaaaaatataaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggagacggagcttgcagtgagccgagaacgcgccactgcactccagcctgggtgacagagcgagactccatctcaaaaaaaaa i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 56052345 290 + 60714840 agccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcagatcacaaggtcaggagatcgagaccatcatggttaacacggtgaaaccctgtctctactaaaaatataaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctacgcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtaagccgagatcgcaccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaaaa i ponAbe2.chr19 C 0 I 814 s nomLeu3.chr10 102836578 289 - 106955855 Agccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcagatca-aaggtcaggagatcgagaccatcatgtttaacacagtgaaaccccgtctctactaaaaatataaaaaattagcagggcgtggtggcgggcatctgtagtcccagctactcaggaggctgaggcaggagaatggagtgaacccgggaggtgaagcttgcagtgagctgggatcccaccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaca i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102774774 10123 + 122678785 T e calJac3.chr22 45523733 783 + 49145316 I e chlSab2.chr6 46998256 816 + 50890351 I e papAnu2.chr19 47303836 809 + 51301725 I e macFas5.chr19 55196858 810 + 59248254 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=-584.000000 s hg38.chr19_GL949747v2_alt 271585 8 + 729520 caaa--aaaa--- s panTro4.chr19 59225499 10 + 63644993 caaacaaaaa--- i panTro4.chr19 I 2 C 0 s nomLeu3.chr10 102836867 8 - 106955855 -----aaaaacaa i nomLeu3.chr10 C 0 I 805 e canFam3.chr1 102774774 10123 + 122678785 T e ponAbe2.chr19 56052635 814 + 60714840 I e calJac3.chr22 45523733 783 + 49145316 I e chlSab2.chr6 46998256 816 + 50890351 I e papAnu2.chr19 47303836 809 + 51301725 I e macFas5.chr19 55196858 810 + 59248254 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=1092.000000 s hg38.chr19_GL949747v2_alt 271593 2 + 729520 aa s panTro4.chr19 59225509 2 + 63644993 aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56053449 2 + 60714840 AA i ponAbe2.chr19 I 814 C 0 s nomLeu3.chr10 102837680 2 - 106955855 AA i nomLeu3.chr10 I 805 C 0 e canFam3.chr1 102774774 10123 + 122678785 T e calJac3.chr22 45523733 783 + 49145316 I e chlSab2.chr6 46998256 816 + 50890351 I e papAnu2.chr19 47303836 809 + 51301725 I e macFas5.chr19 55196858 810 + 59248254 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=9466.000000 s hg38.chr19_GL949747v2_alt 271595 10 + 729520 gaaaGACAGC s panTro4.chr19 59225511 10 + 63644993 gaaaGACAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56053451 10 + 60714840 GAAAGACAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102837682 10 - 106955855 GAAAGACAGG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55197668 10 + 59248254 GAGAGAGGGG i macFas5.chr19 I 810 C 0 s papAnu2.chr19 47304645 10 + 51301725 GAGAGAGGGG i papAnu2.chr19 I 809 C 0 e canFam3.chr1 102774774 10123 + 122678785 T e calJac3.chr22 45523733 783 + 49145316 I e chlSab2.chr6 46998256 816 + 50890351 I e rheMac3.chr19 60145665 80755 + 64156825 T a score=2253300.000000 s hg38.chr19_GL949747v2_alt 271605 1063 + 729520 AGATTCTAAAACAGTGGGGCTTTGTAAACCTTTGTTG-TTTCAAAATACTGTGGCTTTGTCTTACTAAGCTGAGGTTCCAGGAGGGATGAGTGAAACTGCATGCACCCGCTCCCATCTCTGTTGGCTTTTTAACCCTTACAAGTCTCAGTTATTTGGAGAATCAGGA--CAGGGCCAGAGATGGCTGGAGATGAGAGCAGGTCTAGGATTGAGCCACATCCCAGATGCCCCAGAAGGTCAGAAATGAAGGGGCTTTGGGGCGGTCACATCCAGGCAGCTCCCCCTTATTCAGATGGGGAGTCCAGGGTGCAAGGGGAACGGTCTCTTTCAGAAGTTCCACCTCCCAAGGAGAGGCTGAACCACCACAGACCCAGCCCCACCTCCCCGGGCTCCTCCCACCTGACTCCTAGACCAAGTACCTGACT-GTGATCTCCCCTGACCCTGGCTCTCCAATGAGAGGTGACGGCTCCTGGGAATCCTGCTGAGGGAGGGGGAAAGACCCCGCTGCTCCACTCATCAATGCTGAATCTTAGACACCTCCCTCCCCTCTGAACACTACGGAGGGAACACCTGCCCCATCCCTGGAGCCCCAGGGAGCCACGCAGACCACACCCTTACTGTCCACCCTCCCCTCTGCTTCCCTGGAAATCAGACCCTGAATATTGGAGGTAGCATTGAGATGAGTCTAGAAAATTCTCTTGAGCTGGGAGTGGCTGTTTTTTTTTGTGACCCATGGGGTCAGGACTTAGAGGTTGGGA--CCCAGAGGCTCAGATTCTGAGGTGGAGACATCAGGAGGGGAGCGGGTGGGGCCTCCGTCTTCCACTCTCAGTCTAATCTCCTCTCCTCTGAGGTTCACC---CCCCGGCCCCGCCATCTCCTCCCAGCCCTCCCTGCTCTTTACTCTACTGGGACTTCAGGGGTGGGAGCCAGGGGTGAGAGGTCCC-TGTCGATTTCCACCCTCTCATGGTCTGGACCCTCCCCTGCAGACCCT-CCCCCTTCACTCCCCTCATTCATTATTGTCCCAGAGCTCTGCTGGGGGCAGGGCCTGAGCTGAGCCTTTGAGCTCAG s panTro4.chr19 59225521 1047 + 63644993 AGATTCTAAAACAGTGGGGCTTTGTAAACCTTTGTTG-TTTCAAAATATTGTGGCTTTGTCTTACTAAGCTGAGGTTCCAGGAGGGATGAGTGAAACTGCATGCACCGGCTCCCATCTCTGTTGGCTTTTTAACCCTTACAAGTCTCAGTTATTTGGAGAATCAGGA--CAGGGCCAGAGATGGCTGGAGATGGGAGCAGGTCTAGGATTGAGCCACATCCCAGATGCCCCAGAAGGTCAGAAATGAAGGGGCTTTGGGGCGGTCACATCCAGGCAGCTCCCCCTTATTCAGATGGGGAGTCCAGG-TGCAAGGGGAACGGTCTTTTTCAGGAGTTCCACCTCCCAAGGAGAGGCTGAGCCATCACAGACCCAGCCCCACCTCCCCAGGCTCCTCCCACCTGACTCCTAGACCAAGCACCTGACT-G--ATCTCCTCTGACCCTGGCTCTCCCATGAGAGGTGACGGCTCCTGGGAATCCTGCTGAGGGAGGGGGAAAGATCCTGCTGCTCCACTCATCCATGCTGAACCTCAGACACCTCCCTCCCCTCTGAACACCACGGAGGGAACACCTGCCCCATCCCTGGAGCACCAGGAAGCCACGCAGACCACACCCT-------------CCCCTCTGCTTCCCTGGAAATCAGACCCTGAATATTGGAGGTAGCATTGAGATGAGTCTAGAAAATTCTCTTGAGCTGGGAGTCGTTGTTTTTTTTTGTCACCCATGGGGTCAGGACTTAGAGGTTGCGA--CCCAGAGGCTCCGATTCTGAGGTGGAGACATCAGGAGGGGAGCGGGTGGGGCCTCCGTCTTCCACTCTCAGTCTAATCTCATCTCCTCTGAGGTTCACC--TCCCCCTCCCCGCCGTCTCCTCCCAGCCCTCCCTGCTCTTTACTCTACTGGGACTTC-GGGGTGGGAGCCCAGGGAGGGAGATCCC-CATCTATTTCCACCCTCTCATGGTCTGGACCGTCCCCTGCAGACCCT-CCCCCTTCACTCCCCTCATTCATTCTTGTCCCAGAGCTCTGCTGGGGGCAGGGCCTGAGCTGAGCCTTTGAGCTCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56053461 1065 + 60714840 AGATTCTAAAACAGTGGGGCTTTGTAAACCTTTGTTG-TTTCAAAATATTGTGGCTTTGTCTTACTAAGCTGAGATTCCAGGAGGGATGAGTGAAACTGCATGCACCTGCCCCCATCTCTGTTGGCTTTTTAACGCTTACAAGTCTCAGTTATTTGAAGAATCAGGA--CAGGGCCAGAGATGGCTGGAGATGGGAGCAGGTCTAGGA-TGAGCCACATCCCAGATGCCCCAGAAGGTCAGAAATGAAGGGGCTTTGGGACAGTCACATCAAGGCAGCTCCCCGTTATTCAGATGGGGAGTCCAGGGTGCAAGGGGAACGGTCTTTTTCAGAAGTTCCACCTCCCAAGGAGAGGCTGAGCCATCACAGACCCAGCCCCACCTCCCCGGGCTCCTCCCACCTGACTCTTAGACCAAGCACCTGCCT-GTGATGTCCCCTGTCCCTGGCTCCCCCATGAGAGGTGACGGCTCCTGGGAATCCTGCTCAGGGAGGGGGAAAGACCCTGCTGCTCCACTCAACAATGCTGAACCTCAGACACGTCCCTCCCCTCTGAACACCACGGAGGGAACAGCTGCCCCACCCCTGGAGCACCAGGAAGCCACGCAGACCACACCCTTACTGTCCACCCTCCCCTCTGCTGCCCTGGAAATCAGACTCTGAATATTGGAGGTAGCATTGAGATGAGTCTAGAAAATTCTCTTGAGCTGGGAGTGGCTGGTTTTTTTTGTCACCCATGGGGTCAGGACTTAGGGGTTGGGA--CCCAGAGGCTCCGATTCTGAGGTGGAGACATCAGGAGGGGAGCGGGTGGGGCCTCCGTCTTCCACCCTCAGTCCAGTCTCGTCTCCTTTGAGGTTCACCCCTCCTCCGCCCCGCCGTCTCCTCCCTGACCTCCCTGCTCTTTACTCTACTGGGACTTCAGGGGTGGAAGCCAGGGGTGGGAGATCTC-CATCTATTTCTACCCTCTCATGGGCTGGACCCTCCCCTGCAGACCCT-CCCCCTTCACTCCCCTCATTCATTATTGTCCCAGAGTTCTGCTGGGGGTAGGGCCTGAGCTGAGCCTTTGAGCTCGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102837692 1058 - 106955855 AGATTCTAAAACAGTGAGGCTTTGTAAACCTTTGTTG-TTTCAAAATATTGTGGCTTTGTCTTACTAAGCTGAGATTCCAGGAGGGATGAGTGAAACTGCATGCACCTGCCCCCATCTCTGTTGGCTTTTTAACCCTTACAAGTCTCAGTTATCGGGAGAATCAGGACCCCTGTCCAGAGATGGCTGGAGACGGGAGCAGGTCTAGGA-TGAGTCACATCCCAGATGCCCTAGAAGGTCAGAAATGAAGGGGCTTTGGAGCGGTCACATCCAGGCAGCTCCCCCTTATTCAGATGGGGAGTCCAGGGTGCAAGGGGAACGGTCTTTTTCAGGAGTTCCACCTCCCAAGGAGAGGTTGAGCCATCACAGACCCAGCCCCACCTCCCCAGGCTCCTCCCACCTGACTCCTAGACCAAGCACCTGCCT-GTGATCTCCCCTGACCCTGGCTC-CCCATGAGAGGTGACGGCTCCTGGGACTCCTGCTCGGGGAGGGGGAAAGACCCTGCTGCTCCACTCATCAATGCTGAACCTCAGACACCTCCCTCCCCTCTGAACACCATGGAACGAACACCTGCCCCATCCCTGGAGCACCAGGAAGCCACGCAGACCACACCCTTACTGTCCACCCTCCCCTCTGCTGCCCTGGAAGTCAGACCCTGAATATTGGAGGTAGCATTGAGAAGAGTCTAGAAACTTCTCTTGAGCTGGGAGTGGCTGTTTTT-----TCACCCATGGGGTCAGGACTTAGGGGTTGGGA--CCCAGAGGCTCTGATTCTGAGGTGGAGACATCAGGAGGGGAGCGGGTGGGGCCTCCGTCTCCCACCCTCAGTCTAATCTCGTCTCCTCTGAGGTTCACC---CCCCACCCCCGCCATCTCTTCCCAGCCCTCCCTGCTCTTTACTCTACTGAGACTTCAGGGGTGGGAGCCCAGGGTGGGAGATCCC-CGTCTATTTCTACCCTCTCATGGGCTGGACCCTCCCCTGCAGACCCTCCCCCCTTCACTCCCCTCATTTATTATTGTCCCAGAGCTCTCCT-GGGGCAGGGCCTGAGCTGAGCCTTTGAGTTCAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55197678 1049 + 59248254 AGATTCTAAAACAGTGGGACTTTGTAAATCTTTGTTG-TTTCAAAATAGTGTGGCTTTGTCTTACTAAGCTGAGATTCCAGGAGGGATGAGTAAAACTGCATGCACCTGCCCCCATCTCCGTTGGCTTTTTAACCCTTACAAGCCTCCGTTATTGGGAGAATTAGGA--CAAGGCCAGAGAGGGCTGGAGATGGGAGCAGGTCTAGGA-GGAGCCACATCCCAGATGCCCCAGAAGGTCAGAAATGAAGGGGCTTTGGGGTGGTCACATCCAGGCAGCTCCCCGTTATTCAGATGGGGAGTCCAGGGTGCGAGGGGAACCAACTTTTTCAGAAGTTCCACCTCCCAAGGAGAGGCTGAGCCATCACAGTCCCAGCCCCACCTCCCCGGGCTCCTCCCACCTGACTCCTAGAGCAAGCACCTGCCT-ATGATCGCCCCTGGCCCTGGCTC-CCCATGAGAGGTGATGGCTCCTGGGAATCCTGCTCAGGGAGGGGGAAAGTCCCCGCTGCTCCACTCATCAATGCCGAACCTCAGACACCTCCCTCCCCTCTGACCACCACGGAGGGAGCACCTGCCCCAACCCTGGAGCACCAGGAAGCCACGCGGACCACACCCTTACTGTCCACCCTGCCCTCTGCTGCCCTG--AATCAGATCCCGAATATTGGAGGTAGCATTGAGATGAGTCTAGAAACTTCTCTTGACTTGGGAGTGGCTGGTTTTTTTTGTTACCCAT-GAGTCAGGACTTAGAGGTTGGGACCCCCAGAGGCTCTGATTCTGAGGTGGAGACATCAGGAGGGGTGCGGGTGGGGCCTCCGTCTTCCACAGTCATTCTAATCTCATCTCCTCTGAGGTTCACC---C----------CCGTCTCCTCCCAGCCCTCCCGACTCTTCACTCCACTGAGACTTCAGGGGTGGGAGCCAGGGGTGGGAGGTCGC--ATCTATTTCCACCCTCTCATGGGCTGGATCCTCCCCTGCGGACCCT-GCCCCTTCACTCCCCTCCTTCATTATTGTTCCAGAGCTCTGCTGGGAGCAGGGCCTGAGCTGAGCCTTTGAGTTCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47304655 1042 + 51301725 AGATTCTAAAACAGTGGGGCTTTGTAAACCTTTGTTG-TTTCAAAATAGTGTGGCTTTGTCTTACTAAGCTGAGATTCCAGGGGGGATGAGTAAAACTGCATGCACCTG-CCCCATCTCCGTTGGCTTTTTAACCCTTACAAGCCTCCGTTATTGGGAGAATTAGGA--CAAGGCCAGAGAAGGCTGGAGATGGGAGCAGGTCTAGGA-GGAGCCACATCCCAGATGCCCCAGAAGGTCAGAAATGAAGGGGCTTTGGGGTGGTCACATCCAGGCAGCTCCCCGTTATTCAGATGGGGAGTCCAGGGTGCGAGGAGAACCAGCTTTTTCAGAAGTTCCACCTCCCAAGGAGAGGCTGAGCCATCACAGACccagctccacctccccaggctccTCCCACCTGACTCCTAGAGCAAGCACCTGCCT-GTGATCGCCCCTGGCCCTGGCTC-CCCATGAGAGGTGATGGCTCTTGGGAATCCTGCTCGGGGAAGGGGAAAGTCCCCGCTGCTCCACTCATCAATGCCGAACCTCAGacacctccctcccctctgaCCACCACGGAGGGAGCACCTGCCCC-ATCCTGGAGCACCAGGAAGCCACGCGGACCACACCCTTACCGTCCACCCTGCCCTCTGCTGCCCTG--AATCAGACCCTGAATATTGGAGGTAGCATTGAGATGAGTCTAGAAACTTCTCTTGAGCTGGGAATGGCTG--TTTCTTTGTCACCCAT-GAGTCAGGACTTAGAGGTTGGGACCCCCAGAGGCTCTGAATCTGAGGTGGAGACACCAGGAGGGGAGTGTGTGGGGCCTCCATCTTCCACCCTCAGTCTAATCTCAT---CTCTGAGGTTCACC---C----------CCATCTCCTCCCAGCCCTCCCTGCTCTTTACCCTACTGAGACTTCAGGGATGGGAGCCAGGGGTGGGAGGTCCC--GTCTATTTCCACCCTCTCATGGGCTGGACCCTCCGCTGCGGACCCT-CCCCCTTCACTCCCCTCTTTCATTATTGTCCCAGAGCTCTGCCGGGGGCAGGGCCTGAGCTGAGCCTTTGAGTTCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46999072 1047 + 50890351 AGATTCTAAAACAGTGGGGCTTTGTAAACCTTTGTTG-TTTCAAAATAGTGTGGCTTTGTCTTACTAAGCTGAGATTCCAGGAGGGATGAGTAAAACTGCATGCACCTGCCCCCATCTCTGTTGGTTTTTTAACCCTTACAAGCCTCCGTTATTGGGAGAATTAGGA--CAAGGCCAGAGAGGGCTGGAGATGGGAGCAGGTCTAGGA-GGAGCCACATCCCAGATGCCCCAGAAGGTCAGAAACGAAGGGGCTTTGGGGTGGTCACATCCAGGCAGCTCCCCGTTATTCAGATGGGGAGTCCAGGGTGCGAGGAGAACCAGCTTTTTCAGACGTTTCACCTCCCAAGGAGAGGCTGAGCCATCACAGACCCAGCCCCACCTCCCCGGGCTCCTCCCACCTGACTCCTACAGCAAGCACCTGCCT-GTGATCTCCGCTGGCCCTGGCTC-CCCATGAGAGGTGATGGCTCCTGGGAATCCTGCGCGGGGAGGGGGAAAGTCCCCGCTGCTCCACTCATCAATGCCGAACCTCAGACACCTCCCTCCCCTCTGACCACCACGGAGGGAGCACCTGCCCCAACCCTGGAGCACCGGGAAGCCACGCAGACCACACCCTTACTGTCCACCCTGCCCTCTGCTGCCCTGGAAATCAGACCCTGCTTATTGGAGGTAGCATTGAGATGAGTCTAGAAACTTCTCTTGACTTGGAAGTGGCTG--TTTTTTTGTCACCCATGGGGTCAGGACTTAGGGGTTGGGACCCCCAGAGGCTCTGATTCTGAGGTGGA-ACATCAGGAGGGGAGCGGGTGGGGCCTCTGTCTTCCACAGTCATTCTAATCTCATCTCCTCTGAGGTTCA-----C----------CCATCTCCTTCCAGCCCTCCCGGCTCTTCACTCCACTGAGACTTCAGGGGTGGGAGCCAGGGGTGGGAGGTCCC--ATCTATTTCCACCCTCTCATGGGCTGGATCCTCCCCTGCGGACCCT-GCCCCTTCACTCCCCTCCTTCATTATTGTCCCAGAGCTCTGCTGGGGGCAGGGCCTGAGCTGAGCCTTTGAGTTCAG i chlSab2.chr6 I 816 C 0 s calJac3.chr22 45524516 1011 + 49145316 AGATTCTAAAACAGTGGGGCTTTGTAAAC--TTGTTACTTTCAAAATACTGTGGCTTTGTCTTACTAAGCTGAGATCCCAGGAGTGATGAGTGAAACCGCGGGCACCTG-CTCCATCTCCGTTGGCTTTTCAACCCTTACAAGCCTCAGTTATTGGGGGAATCAGGA--CAAGGCCAGAGAGGGTTGCATATGAGAGCAAGTCTAGGT-TAAGCCACATCTCAGATGCCCCAAAAAGTCAGAAATGAGGAGGCTTTGGGGGAGTCACCTCCAGGCAGCTCCCCCTTATTCAGATGGGGAGTCCAGGGTGTGAGGGGAAC-----TTCTTAGAAGTTCCACCTCCAAAGGGGAGGCTGAGCCATCACAGACACA-CACCCCCTGCCAGGGTCCCTCCTACCGGATTCCTAGACCAAGCACCTGCCTCGTTATCTCCCCTGGCCCTGGCCCCCATATGAGAGGTGACAGCTCCTGGGAATCATGCTCAGGAAGGGGGAAAGACCCCACTGCTCCACTCATCAATACTGAACCTCAGACACTTTCCTTTCCTCTGA---------------CATCTGCCCCATCCCTGGAGCCCCAGGAAGCCACGAGGACCACACTCTTACTGTCCCCCTTCTCCTCTGTTCCCCTGAAAATCAGACCGTGAATATTGAAGGTAGGATTAAGATGAGTCTAGAAACTCCTCTTGAGCTGGAAGTGACTG--TGTTTTTATCACCAATGGGGTCAGAACTTAGAGGTTGGGACACCCCGAGGTTCTGAA-CTGAGGTGGAGACATCAGGAGGGGAGTGGGTGGGGCCTGTGTCTTCCAATCTCAGTGTAATCTCATC-CCTCTGAGGTTCACC---C----------CCATCTTCTCCCAGCCATCCCTGCTCTTTATGCT------ACTTCAGGGGTGGGAGCCAGGGGTGGGAGGTTCCCCATCTATTTTCACC----------CTGGAACCTCCCCTGGGGACTCT-CCTCCTTCACTCCCCTCATTCCTTAGTGTCCC-GAGCTCTCCTGGGGGCAGGGCCTGGGCTGAG-CTTTGAGCTCAG i calJac3.chr22 I 783 C 0 e canFam3.chr1 102774774 10123 + 122678785 T e rheMac3.chr19 60145665 80755 + 64156825 T a score=1220684.000000 s hg38.chr19_GL949747v2_alt 272668 476 + 729520 AGAGGACGGGGTCA-GGGCCCTCACCTGAGACCACGAGCTCCAGGGGGTCACTGGGGTGAGTCAGCAGGTAGGGGTTGGAGCTGAGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCCGAGGTCACAGGACTCATGGGGAATTCAGCCTGGTACTTATGAGATTGGCGCTTTGATTTTAGACGCAGCGGGGAATCAGCTGCCCCCTCCTTGGTCAAAAGGAAAGTGTGCATCCCTCCCTGTGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACTGTGGGGCCCGGCCGCACGGAGAGGAAGGGTCTGGCACGGATCTGTCCTGGAGAGAAGAAGGATGGGTGAGGGGCTGCCCCACCTT-GCTCTGAGCTGAGACCTCCCCAGGCCTCTCCCTGGGACCCTCAGTCTCT--CTGTCTCTGTTTTCTCTGAGTCTCCCC-TCCCCGCCCA-CC-CCTGTCACTGTCTGTCTCTCCC s panTro4.chr19 59226568 475 + 63644993 AGAGGACAGGGTCA-GGGCCCTCACCTGAGACCACGAGCTCCAGGGGGTCACTGGGGTGAGTCAGCAGGTAGGGGTTGGAGCTGAGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCCGAGGTCACAGGACTCATGGGGAATTCAGCCTGGTACTTATGAGATTGGCGCTTTGATTTTAGACGCAGCGGGGAGTCAGCTGCCCCCTCCTTGGTCAGAAGGAAAGTGTTCATCCCTCCCTGTGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACTGTGGGGCCCGGCCGCACGGAGAGGAAGGGTCTGGCACGGATCTGTCCTGGAGAGAAGAAGGATGGGTGAGGGGCTGCCCCACCTT-GTTCTGAGCTGAGACCTTCCCAGGCCTCTCTCTGGGACCCTCAGTCTCTGGTTGCCTCTGTTTTCCCTGAGTCTCCCCCTCCCCACCCA-CC-CCTGTC----TCTGTCTCTCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56054526 471 + 60714840 AGAGGACAGGGTCA-GGGCCCTCACCTGAGACCATGAGCTCCAGGGGGCCACTGGGGTGAGTCAGCAGGTAGGGGTTGGAGCTGATTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCCGAGGTCACAGGACTTATGGGGAATTCAGCCTGGTACTTATGAGATTGGCACTTTGATTTTAGACGCAGCGGAGGATCAGCTGTCCCTTCCTTGGTCAGAAGGAAAGTGTGCATCCATCCCTGTGACTGACACAGCAGGGTCACATTCTCTCCTGAGGTCACTGTGGGGCCCGGCCTCACAGAGAGGGA-GGTCTGGCACGGATCTGTCCTAGAGAGAAGAAGGATGGGTGAGGGGCTGCCCCACCTT-GTTCTGAGCTGAGACCTCCCCAGGCCTCTCCCTGGGACCCTCAGTCTCT--CTGTCTCTGTGTTCTCTGAGTCTCCCC-TCCCCGCCCA-CC-CCTGTC----TCTGTCTCTCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102838750 478 - 106955855 AGAGGACAGGGTCG-GTGCCCTCACCTGAGACCACGATCTCCAGGGGGTCACTGGGGTGAGTCAGCAGGTAGGGGTTGGAGCTGAGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACCCATGGGGAATTCAGCCTGGTACTTATGAGATTGGCGCTTTGATCTCAGACGCAGCAGGGGATCAGCTGTCCCCTCCTTGGTCAGAAGGAAAGTGTGCATCCGTCCCTGTGACTGACACAGCAGGGTCACATTCTCTCCTGAGGCCACTGTGGGGCCCGGCTGCACCAGGAGGAAGGGTCTGGCACGGATCTGTCCTGGAGAGAAGAAGGATGGATGAGGAGCTGCCCCACCTT-GTTCTGAGCTGAGACCTCCCCAGGCCTCTCTCTGGGACCCTCAGTCTCT--CGGTATCGGTTTTTTTGGAGTCTCCCCCGCCCCGCCCATCC-CCTGTCTCTGTCTGTCTCTCCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55198727 475 + 59248254 AGAGGACAGGGTCA-GGGCCCTCACCTGAGACCACGAGCTCCAGGGGGTCACTGGGGTGAGTCAGCAGGTAGGGGTTAGAGCTGAGTGAGCCGTAGCACCTGTAGGTCCCCGCATGGGCTGAGGTCACAGGACTTATGGGGAATTCAGTCTGGTACTTATGAGATTGGCGCTTTGATTTTAGACGCAGGGGGGGATCAGCTGCTCCCTCCTTGGTCAGAAGGAAAGTGTGCATCCATCCCTGTGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACCGTGGAGCCCGGCTGCACTGAGAGGAAGGGTCTGGCACGGATCTGTCCTGGAGAGGGGAAGGATGGATGAGGGGCTGCCCCACCTT-GTTCTGAGCTGATACCT-CCCAGGCCTCTCTCTGGAACCCTTAGtctct--ctg--tctgttttctctgagtctccccctctctgccca-tcgcctgtctctgtctgtctctctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47305697 472 + 51301725 AGGGGACAGGGTCA-GGGCCCTCACCTGAGACCACGAGCTCCAGGGGGTCACTGGGGTGAGTCAGCAGGTAGGGGTTGGAGCTGAGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACTCATGGGAAATTCAGCCTGGTACTTATGAGACCGGCGCTTTGATTTCAGACGCAGGGGGGCATCAGCTGCTCCCTCCTTGGTCAGAAGGAAAGTGTGCATCCATCCCTGTGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACCGTGGAGCCCGGCTGCACTGAGAGGAAGGGTCTGGCACGAATCTGTCCTGGAGA---GAAGGATGGATGAGGAGCTGCCCCGCCTT-GTTCTCAGCTGACACCT-CCCAGGCctctctctggaaccctcagtctct--ctg--tctgttttctctgagtctccccctctctgccca-tcgcctgtctctctctgtctctctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47000119 474 + 50890351 AGAGGACAGGGTCA-GGGCCCTCACCTGAGACCATGAGCTCCAGGGGGTCACTGGGGTGAGTCAGCAGGTAGGGGTTGGAGCTGAGGGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACTCATGGGAAATTCAGCCTGGTACTTATGAGATTGGCGTTTTGATTTTAGACGCAGGGGGGGATCGGCTGCTCCCTCCTTGGTCAGAAGGAAAGTGTGCATCCACCCCTGTGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACCGTGGAGCCCGGCTGCACTGAGAGGAAGGGTCTGGCGTGGATCTGTCCTGGAGAGAAGAAGGATTGATGAGGGGCTGCCCTACTTT-GTTCTGAGCCGATACCT-CCCAGGCCTCTCTCTGGAACCCTTAGtctct--ctg--tctgttttctctgagtctccccctctctgccca-tc-cctgtctctaactgtctctctc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45525527 462 + 49145316 AGAGGACATGGTCA-GGGCCCTCACCTGAGATCACGAGCTCCAGGGGGTCACTGGGGTGAGACAGCAGGTAGGGGTCGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCACATGGACTGAGGTCACCGCACTTAAGGGGAATTGAGCCTGGTACTTATGAGATTCATTCCTTGATCTTACACGCACGGGGGCATCAGCTGCTCCCGCCTTGGTCAGAAGGAAAGTGTCCATTGGGCTCTGTGACTGACACAGCAGGGTCAGGTTCTCTCCAGAGGCCACAGTGAGGCCTGGCTGCACTGAGAGGGAGGGTGTGTCAGGGATCTGTCCTGGAGAGAAG-AGGATGGGTGAGGGGCT-CCCCGCCTT-GTTCTGAGCTGAGACCTCCCCAGGCCTGTCTCTGGGACCCTCAGTCTCT------------TTTCTCTAAGTCTCCCCCTCTCTGCACA-TCTCCTGTC----TCTGTATCTCCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19704306 436 - 122678785 AGGAGACAGGGTCAGGGGCCCTCACCTGAGACCAGGATCTTCACGGGGACACTTGGGTGTGATAACAGGTAGGGGGAGGTGTTGAATGAGCCATAGCACCTGTAGGTGCCCCTGTGGGCTGAGGTCACAGGACTCATGGAAAATTCCGCCTGGTACAGCCCAGAAGAGTATTTTGATCTAAGACGCAGTGGGGGATTGGCTGCCCCCTCCTTGGACAGAAGGAAAATATCCACAGAGCTCAGTGACTGACACAGCAGGGTCACATTCTCTCCTGGGGCCACAGTGGGTCCTGGCTGCACCTGGAGGGAGGGCGTGTAGGGGAACTGTCCTAGAGAGAGGAAGGGTGGGTGAGGGGCTGTCCAGCCCTAGTTCTGA-------------------------------CCTGAATCTCT--CTG------TGTCCTCTGAGTCTCTCCCATCCT---CA-TCCCGTATT----TCTGTCTCTTCC i canFam3.chr1 T 10570 C 0 e rheMac3.chr19 60145665 80755 + 64156825 T a score=170846.000000 s hg38.chr19_GL949747v2_alt 273144 52 + 729520 -TCCCTTAGGACCCCCACCCCTCATCCCGGCCATCACCACCTGGGCTCCCCCA s panTro4.chr19 59227043 52 + 63644993 -TCCCTTGGGACCCCCACCCCTCATCCCGGCCATCACCACCTGGGCTCCCCCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56054997 52 + 60714840 -TCCCTTAGGACCCCCACCCCTCATCCCGGCCATCACCACCTGGGCTACCCCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102839228 51 - 106955855 -TCCCTTGGGA-CCCCACCCCTCATCCCGGCCATCACTACCTGGGCTCCACCG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60064910 52 + 64156825 -TCCCTTGGGACCCCCGCCCCTCATCCCAGCCATCACCACCTGGGCTCCCCCA i rheMac3.chr19 T 80755 I 121 s macFas5.chr19 55199202 52 + 59248254 -tccctTGGGACCCCCACACCTCGTCCCAGCCATCACCATCTTGGCTCCCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47306169 52 + 51301725 -tcccttgggACCCCCACACCTCATCCCAGCCATCACCATCTTGGCTCCCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47000593 52 + 50890351 -tccctTGGGACCCCCACACCTCGTCCCAGCCATCACCATCTTGGCTCCCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45525989 52 + 49145316 -TCCCTTGGGACTCCCACCCCTCATCCCAGCCATCACCACCTGGGCTCCCCCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19704742 52 - 122678785 CTCCCTGGAGA-CCCCACCTCCCAGGTTGGCCACCATCAGCTGGGCTTCCCTC i canFam3.chr1 C 0 C 0 a score=1116703.000000 s hg38.chr19_GL949747v2_alt 273196 307 + 729520 GCAGGG-CCTTTGCGGAGCCTGGGTCCCTGACTGAACCCGCTG-GGCTCCTCACCTGTGATCAGGATGTCCAGGGGGTCGCTGGGGGCCGACCACTCGGAGGAGAGGTTGTATGCACCGGAGCATGTGTACTGGCCCCCGTAGGAGCGGCTCACAGGGCCCAGGGTGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGAGGAAGTCACGTCCCCACTCCTTGTACAGAACAAATCTGTCGTAGCCGGCATCAGAGCCACACTGGAAGGTCAGCTTCTCCCCAGGGGCCACGA s panTro4.chr19 59227095 307 + 63644993 GCAGGG-CCTGTGCAGAGCCTGGGTCCCTGACTGAACCCGCTG-GGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTTGCTGGGGGCCGACCACTCGGAGGAGAGGTTGTGTGCACCGGAGCATCTGTACTGGCCCCCGTAGGAGCGGCTCACAGGGCCCAGGGTGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGAGGAAGTCACGTCCCCACTCCTTGAACAGAACAAATCTGTCGTAGCCGACATCAGAGCCACACTGGAGGGTCAGCTTCTCCCCAGGGGCCACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56055049 307 + 60714840 GCAGGT-CCTGTGCAGAGCCTGGGTCCCTGACTGAACCCGCTG-GGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCACTGGGGGCCGACCACTCAGAGGAGAGGTTGTGTGCGCCGGAGCATCTGTACTGGCCCCCGTAGGAGCGGCTGACAGGGCCCAGGGTGAAGTTGGCCTGGGAGATCCCAGCCTGGGGCTGCCAGCCAGGGCGCTGGAGGAAGTCACGCCCCCACTCCTTGTACAGAGCGAATCTGTCATAGCCGGCATCAGAGCCACACTGGAGGGTCAGCTTCTCCCCAGGGGCCACGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102839279 307 - 106955855 GCAGGG-CCTGTGCAGAGCCTGGGTCCCTGACTGAACCTGCTG-GGCTCCTCACCTGTGATCAGGATGTCCAGGGGGTCACTGGGGGCCGACCACTCAGAGGAGAGGTTGTGTGCGCCAGAGCATCTGTACTGGCCCCCATAAGAGCGGCTCACAGGGCCCAGGGTGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGAGGAAGTCACGTCCCCACTCCTTGTACAGAGTGAATCTGTCGTAGCCGACATCAGAGCCACACTGGAGGGTCAGCTTCTCCCCAGGGGCCACGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60065083 307 + 64156825 GCAGGG-CCTGTGCAGAGCCTGGGTCCCTGACTGAACCCGCTG-GGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCACTGGGGGCCGACCACTCGGAGGAGAGGTTGTGTGCACCGTAGCATCTGTACTGGCCCCCGTGGGACACCCTCACAGGGCCCAGGGTAAAGTTGGCCTGGGAGAGCCCAGCCTGGGGCTGCTGGCCAGAGCCCTGGAGGAGGTCACGTTCCCCCTCCTTGTACAGAGCAAATCTGTCGTAGCCGACATCAGAGCCACACTGGAGGATCAAGTGCTCTCCAGGGACCACGA i rheMac3.chr19 I 121 I 476 s macFas5.chr19 55199254 307 + 59248254 GCAGGG-CCTGTGCAGAGCGTGGGTCCCTGACTGAACCCACTG-GGCTCCTCACCTGAGATCAGGATGTCCAGGGGATCACTGGGGGCCGACCACTCGGAGGAGAGGTTGTGTGCACCGGAGCATCTGTACTGGCCCCCGTAGGAGCGGCTCACAGGGCCCAGGGGGAAGTTGGCCTGAGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGAGGAAGTCACGTCCCCACTCCTTGTACAGAGCAAATCTGTTGTAGCCGGCATCAGAGCCACACTGGAGGGTCAGCTTCTCCCCAGGGGCCACGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47306221 307 + 51301725 GCAGGG-CCTGTGCAGAGCGTGGGTCCCTGACTGAACCCGCTG-GGTTCCTCACCTGAGATCAGGATGTCCAGGGGGTCACTGGGGGCCGACCACTCGGAGGAGAGGTTGTGTGCACCGGAGCATCTGTACTGGCCCCCGTAGGAGCGGCTCACAGGGCCCAGGGGGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGAGGAAGTCACGTCCCCACTCCTTGTACAGAGCGAATCTGTTGTAGCCGGCATCAGAGCCACACTGGAGGGTCAGCTTCTCCCCAGGGGCCACGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47000645 307 + 50890351 GCAGGG-CCTGTGCAGAGCCTGGGTCCCTGACTGAACCTGCTG-GGTTCCTCACCTGAGATCAGGATGTCCAGGGGGTCGCTGGGGGCCGACCACTCAGAGGAGAGGTTGTGTGCACCGGAGCATCTGTACTGGCCCCCGTAGGAGCGGCTCACAGGGCCCAGGGGGAAGTTGGCCTGGGAAAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGAGGAAGTCACGTCCCCACTCCTTGTACAGAGCAAATCTGTTGTAGCCGGCATCAGAGCCACACTGGAGGATTAGCTTCTCCCCAGGGGCCACAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45526041 307 + 49145316 GCAGGA-CCTGTGCAGAGCCTGGGTCTCTGACTGAACCCGCTG-GGCTCCTCACCTGAGATCAGGACGTCCAGGGGATCACTGGGGGCCGACTGCTCGGAGGAGACGTTGTAGGCACCCGAGCATCTGTACTGGCCCCTGTGGGAGACCCTCACAGGGCTCAGGGTGAAGTTGGCCTGGGAGAGCCCAGCCTGGGTCTGCCGGCCAGGGTGCTGGAGGAGGTCAGGTCCCCAGTCCTTGTACAGAGTGAACCTATCATAGCTGACATCAGAGCCACACTGGAGGGTCAGCCTCTCCTCAGGGGCCACGA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19704794 305 - 122678785 ACAGGGACCTGTGTAGAGTCTGGGGCTTTCCCTG----CACTGTGGCCCCTCACCTGCGACCAGGATGTCCAGGGGGCCACTGGAGGCTGACCACTGGGAGGAGAGGTTGTGTCCACCGTAGCATGTGTACCGGCCCCTGTGGAAGGGTCCCACTGGGCCCAGGGGGAAGTCTGCCCCAGAGAGCCCAGCCTGGGACTGCCAGCCATGACGATGAAGAAGGTCACGTGCCCCCTCCTTGGACAGAACGAATCTGTCATAGCTGACATCAGAGAGACACTGGAGGGTCAGATTCTGTCCAGAGGTCACAA i canFam3.chr1 C 0 C 0 a score=281092.000000 s hg38.chr19_GL949747v2_alt 273503 117 + 729520 CAGGACCCGGCTGCACTGAGAGTGATGGCTTCTTAGAAACACCTGGGAAAAGGTGCTCATGGTTTCCAGGAGCCGACCCTCAGGCTTCCCCACAAACTTTCCCTCTCC---------CCCGGGGCC s panTro4.chr19 59227402 117 + 63644993 CAGGACCCGGCTGCACTGAGAGTGATGGCTTCTTAGAAACACCTGGGAAAAGGTGCTCATGGTTTCCAGGAGCCGACCCTCAGGCTTCCCCACAAACCTTCCCTCTCC---------CCCAGGGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56055356 109 + 60714840 CAGGACCCGGCTGCACTGAGAGTGATGGCTTCTTGGAAACACCTGGGAAAAGGTGGTCATGGTTTCCAGGAGCCGACCCTCAGGCTTCCTCACAAATCCTCCGT-----------------GGGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102839586 117 - 106955855 CAGGACCCGGCTGCACTGAGAGTGATGGCTTCTTAGAAACGCCTGGGAAAAGGTGGTCATGGTTTCCAGGAGCCGACCCTCAGGCTTCCCCACAAACCCTCCCTCTCC---------CCCGGGGCC i nomLeu3.chr10 C 0 I 290 s macFas5.chr19 55199561 116 + 59248254 CAGGACCCGGCTGCACTGACAGTGACGGCTTCTTAGAAACACCTGGGAAAAGGTGGTCACGGTTTCCAGGAG-CGACCCTCAGGCTTCCCCACAAACCCTCCCTCTCC---------CCCTGGGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47306528 116 + 51301725 CAGGACCCGGCTGCACTGACAGTGACGGCTTCTTAGAAACACCTGGGAAAAGGTGGTCACGGTTTCCAGGAG-CGACCCTCAGGCTTCCCCACaaaccctccctctcc---------ccctgggCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47000952 116 + 50890351 CAGGACCCGGCTGCACTGAGAGTGACGGCTTCTTAGAAACACCTGGGAAAAGGTGGTCACGGTTTCCAGGAG-CGACCCTCAGGCTTCCCCACAAACCCTCCCTCTCC---------CCCTGGGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45526348 113 + 49145316 CAGGCCCCGGCTGCACTGAGAGTGATGGCTTCTCAGAAACACCTGGG-AAAGGTGGTCATGGTCTCCAGGAGCCGACCCTCAGGC-TCCTCACAAATCCTCCCTCTCC---------CCC--GGCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19705099 116 - 122678785 CAGGGCTCTGCTGGATCCGGAGGGAGGGCTTCCCCAACACACCTGGGAAAGACCAGCCGTGGATTGTAGGGGCTGA----------TTACCTCAAACCTCCCTTCTCCTGTCCTAATCCCCAGGTC i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60065390 476 + 64156825 I a score=128591.000000 s hg38.chr19_GL949747v2_alt 273620 50 + 729520 ---------TCACCACTGCTGATCTTCCTGTGTCTCTGGCCCCAGGAGCCCTGAGCCCT s panTro4.chr19 59227519 50 + 63644993 ---------TCACCACTGCTGATCTTCCTGTGTCTCTGGCCCCAGGAGCCCTGAGCCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56055465 50 + 60714840 ---------TCATCACTGCTGATCTTCCTGTGTCTCTGGCCCCAGGAGCCCTGAGCCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102839993 50 - 106955855 ---------TCACCACTGCTGATCTTCCTGTGTCTCTGGCCCCAGGAGCCCTGAGCCCT i nomLeu3.chr10 I 290 C 0 s macFas5.chr19 55199677 50 + 59248254 ---------TCACCACTGCTGATCTTCCTGTGTCTCTGGCCCCAGGAGCCCTGAGCCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47306644 50 + 51301725 ---------TCACCACTGCTGATCTTCCTGTGTCTCTGGCCCCAGGAGCCCTGAGCCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47001068 50 + 50890351 ---------TCACCACTGCTGATCTTCCTGTGTCTCTGACCCCAGGAGCCCTGAGTCCT i chlSab2.chr6 C 0 T 20298 s calJac3.chr22 45526461 49 + 49145316 ---------TCACCACTGCTGATCTTCCTATGTCTCTGG-CCCAGGAGTCCTGAGCCCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19705215 47 - 122678785 TTATGTCCCTCACCCTTG-----------GAGTCTCTGA-CCTGTGACCCCTGTGGTCC i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60065390 476 + 64156825 I a score=630658.000000 s hg38.chr19_GL949747v2_alt 273670 337 + 729520 CTCGCCCCAACATCATCCCACCTGGAGCTGCCCTGAGACGCGGCTCCTCCCCACCTGCCTGGAGACTCAGGGAGACTCAGG-------------GAACCCCAGGCAATGCTGTGAATTTCTCACCTGGGACCAGGAGCCCCAGGAGATCACTGGGTAGAGACCACACATAGGGAGCGCGCGAGTCATAACCATAGCACCTGTACGACCACCTGCGACTTGGGCTCACGGGGCCCACGGAGAAGATGGCCCGGGATGACCCACGGGCATGGGAATGGGAGTTCAGGCATTGTGGGTGTTCATCTTCTCCTTCCTTACACAGAATGAAGCCATCAAATGCCACCTGTGAGTC s panTro4.chr19 59227569 337 + 63644993 CTCGCCCCAACATCATCCCACCTGGAGCTGCCCTGAGACGTGGCTCCTCCCCACCTGCCTGGAGACTCAGGGAGACTCAGG-------------GAATTCCAGGCAATGCTGTGAATTTCTCACCTGGGACCAGGAGCTCCAGGAGATCACTGGGTAGAGACCACACATAGGGAGCATGCGAGTCATAACCATAGCACCTGTACGACCACCTGCGACTCGGGCTCACGGGGCCCACGGAGAAGATGGCCCGGGATGACCCACGGGCATGGGAATGGGAGTTCAGGCATTGTGGGTGTTCATATTCTCCTTCCTTACACAGAATGAAGCCATCAAATGCCACCTGTGAGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56055515 337 + 60714840 CTCGCCCCAACATCATCCCACCTGGAGCTGCCCTGAGACGCGGCTCCTCCCCACCTGCCTGGAGACTCAGGGAAACTCAGG-------------GAACTCCAGACAATGCTGTGAATTTCTCACCTGGGACCAGGAGCTCCAGGAGATCACTGGGTAAAGACCACACATAGGGAGAGTGCGAGTCATAACCATAGCACCTGTACGACCATCTGCGACTCGGGCTCACGGGGCCCACGGAGAAGATGGCCCAGGACGACCCATGGTTACGGGGCTGAGAGTTCAGGCATTGTGGGTGTTCATCTTCTCCTTCCTTACACAGAATGAAGCCGTCAAATGCCAGCTGTGAGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102840043 327 - 106955855 CTCGCCCCAACATCATCCCCCCTGGAGCTGCCCTGAGAGGCGGCTCCTCCCCACCTGCCTGGAG----------ACTCAGG-------------GAACTCCAGGCAATGCTGTGAATGTCTCACCTGGGACCAGGAGCTCCAGGAGATCACTGGGTGAAGACCACACATAGGGAGAGCGCGAGTCATAAGCATAGCACCTGTACGACCACCTGCGACTCGGGCTCACGGGGCCCACGGAGAAGACGGCCCAGGACCACCCACGGGTACGGGGCTGGGAGTTCAGGCATTGTGGGTGTTCATCTTCTCCTTCCTTACACAGAATGAAGCCGTCAAATGCCAGCTGTGAGCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55199727 327 + 59248254 CTCGTCCCAACATCATCCCACCTGGCGCTGCCCTGAGACGCGGCTCCTCCCCACCTGCCTGGAG----------ACTCAGG-------------GAACTCCAGGCAATGCTGTGAATTTCTCACCTGGGACCAGGAGCTCCAGGAGATCACTGGGTAAAGACCACACATAGGGAGAGCGTGAGTCATAACCATAGCACCGGTACGACCACCTGCGACTCGGGCTCACGGGGCCCACGGAGAAGACGGCCCGGGATGACCCACGGGTACGGGGCTGGGAGTTCAGGCATTGTGGGTGCTCATCTTCTCCTTCCTTACACAGAATGAAGCCGTCAAATGCCACCCGTGAGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47306694 327 + 51301725 CTCATCCCAACATCATCCCACCTGGCGCTGCCCTGAGACGCGGCTCCTCCCCACCTGCCCGGAG----------ACTCAGG-------------GAACTCCAGACAATGATGTGAATTTCTCACCTGGGACCAGGAGCTCCAGGAGATCACTGGGTAAAGACCACACATAGGGAGAGCGTGAGTCATAACCATAGCACCGGTACAACCACCTGCGACTTGGGCTCACGGGGCCCACGGAGAAGACAGCCCGGGATGACCCACGGGTACGGGGCTGGGAGATCAGGCATTGTGGGTGTTCATCTTCTCCTTCCTTACACAGAATGAAGCCGTCAAATGCCACCCGTGAGTC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45526510 324 + 49145316 CTTACCCCAACATCGTCCCACCTGGAGCTGCCCTGAGACTCGGCTCCTCCCCACCTGCCCGGAG----------ACTCAGG-------------GATCTCCAGACAATGCTGTGAATTTCTTACCTGGGACCCGGAGCTCCAGGAGATCACTGGGTGAAGACCACACATAGGGAGAGTGAGAGTCATAACCATAGCACCTGTACGTCCACCTGCGACTTGGGCTCACGGGGCCCACGGAGAAGACAGCCCAGGACGACCCACGGGTACGGGCCTGGGATCT---GCATGGTGGGTGTTCATCTTCTCCTTCCTTACACAAAATGAAGCCATGAAATGCCACCTGTGAGCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19705262 326 - 122678785 CCTGACCCACCCTCA---CATCTGGGGCTTCCCTGGTAGGTTGGCCCCTGAAACTTGTCTGGTG----------CCTCAAACCATGGATGGGATGAAAACCAGGC-----------TTTCTCACCTGAGATCAACAGCTCCAAGGGGTCACTGGGGAGTGACCACTCCTGGGGGGTGTTGCTGTAATAACCATAGCATCTGAATGTCCACATGAGGCTGGGGATCACAGGCCCCACAGGGAACAGGGCCCAGAACCTCATACTAGGTGCTTGCTGGGAGTTCCGGGTCCAGAACAGCTGGCGTTGTCCTTCTTTCATCAGGACGAACCTGTGGAATCCTGTCCATGATAC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47001118 20298 + 50890351 T e rheMac3.chr19 60065390 476 + 64156825 I a score=709779.000000 s hg38.chr19_GL949747v2_alt 274007 253 + 729520 ACACTGGATGGTCACATTCCCTCCTGAGGTCACCACAGGGCTGGGCAGAGCTGAGAGGGTGGGTTTGCTGTAGGCTCCTAGGAGAGAAGGAGGCACCGTGTTAAATGGGGCTCAGA-CCTCCCGCGTCAT-CCCCAGGGCTGGGCTGTGAGAG-GGAGAAGCCCCTGAGAGCTGACCCCCTTCCTGAGGGCGGAGCCTGGGGCTGGGATCCCTGAGTGTCAGCTCACCTGTCACCACCAGCTCCAGGGGGTCACTG s panTro4.chr19 59227906 253 + 63644993 ACACTGGAGGGTCACATTCCCTCCTGAGGTCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTTGCTGTAGGCTCCTAGGAGAGAAGGAGGCACCGTGTTGAATGGGGCTCAGA-CCTCCCGCGTCAT-CCCCAGGGCTGGGCTGTGAAAG-GGAGACACCCCTGAGAGCCGACCCCCTTCCTGAGGGCAGAGCCTGGGGCTGGGATCCCTGAGTGTCAGCTCACCTGTCACCACCAGCTCCAGGGGGTCACTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56055852 253 + 60714840 ACACTGGAGGGTCACATTCCCTCCTGAGGTCACCACAGGGCTGGGCAGAGCTGAGAGGGTGGGTTTGCTGTAGAATCCTAGGAGAGAAGGAGGCACCGTGTTAAATGGGGCTCAGA-CCTCTCGCGTCAT-CCCCAGGGCTGGGTTGTGAGAG-GGAGATGCCCCTGAGAGCCGACCCCCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTTTCACTTGTCACCACCAGCTTCAGGGGGTCACTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102840370 253 - 106955855 ACACTGCAGGGTCACATTCTCTCCTGAGGTCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTTGCTGTGGGCTCCTAGGAGAGAAGGAGGCACCGTGTTAAATGGGGCTCCCA-CCTCCCACATCAT-CCCCAGGGCTGGGCTGTGAGAG-GCAGACGCCCCTGAGAGCCGATCCCCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCACTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60065866 255 + 64156825 ACACTGGATGGTCACGTTCTCTCCTGAGGTCACCACAGGGCTCGGCAAGGCTGAGAGGGTGGGTTCTCTGTAGGCTCCTAGGAAAGAAGGAGACACTGTCTTAAATGGGACTCATG-CCTCCCACATCATCCCCCAGGGCTGAGTTATTAGAACGAAGATGCCCCTGAGAGCTGACCTCCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTTACCTGTCACCACCAGTTCCAGCGGGTCACTG i rheMac3.chr19 I 476 I 147 s macFas5.chr19 55200054 253 + 59248254 ACACTGGAGGGTCACGTTCCCTCCTGAGGCCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTTTCTGTAGGCTCCTAGGAGAGAAGGAGGCACCGTGTTAAATGGGACTCACA-CCTCCCGCATCAT-CCCCAGGGCTGGGCTGTGAGAG-GGAGACGCCCCTGAGAGCCGACCCCCTTCCTGAGGACAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCACTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47307021 252 + 51301725 ACACTGGAGGGTCACGTTCCCTCCTGAGGCCAccacagggctgggcagggctgagaGGGTGGGTTTTCTGTAGGCTCCTAGGAGAGAAGGAGGCACCGTGTTAAATGGG-CTCCCA-CCTCCCGCATCAT-CCCCAGGGCTGGGCTGTGAGAG-GGAGACACCCCTGAGAGCCGACCCCCTTCCTGAGGACAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCACTG i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45526834 252 + 49145316 ACACTGGAGGGTCACGCTTCCTCCTGGGGTCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTTCCTGTAGACTCCTAGGAGAGAAGGAGGCCCCGTGATAAGTGGGGCTCACA-CCTCCCACATCAT-CCCCAGGGCTGGGCTGTGAGAG-GGAGATGCCCCTGAGTGCAGAGCCCCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTC-TCTCACCTGTCACCACCAGCTCCAGGGGATCACTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19705588 250 - 122678785 ACACTGGAGGGTCACATTCCCTCCTGAGGGCACGATAGAGCTGGGCAGGACTGAGAGGCTGGGTTTGCTGTGCATCCCTAGGAGAG-GGGAGGGGCTGTGTTACATGGGGCTCAGATCCCCCCACATGAT-CCCCAGGGATGGGCTGTGAGAG-GGCGACA-TCCTGAGAGCAGACCCTCTTCCTGAGGGCATAGCCTGGGCTGGAGA--CCTGAGTGGGCTCACACCTGTCACCACCAGCTCCAGGGGGTCACTG i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47001118 20298 + 50890351 T a score=248164.000000 s hg38.chr19_GL949747v2_alt 274260 150 + 729520 CTCTCTGAGAGGCCTGCAGTGTGGCTGCCATAGATACAGCAATACCGCCCTGCATGTTCCCAGGTGATGGATAGGATGGGGAACTGGCCCTTCTTCACAAGCTCCTGTGGGATCCGTGTAATCCAGAGTGCTGTTTTCTTTTCTCTATAT s panTro4.chr19 59228159 150 + 63644993 CTCTCTGAGCGGCCTGCAGTGTGGCTGCCATAGATACAGCAATACCGCCCTGCATGTTCCCAGGTGATGGATGGGATGGGGAACTGGCCCTTCTTCACAAGCTCCTGTGGGATCCGTGTAATCCAGAGTGCTGTTTTCTTTTCTCTATAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56056105 148 + 60714840 CTCTCTGACCGGCCTGCAGTGTGGCTACCATAGATACAGCGATAATGCCCTGCATGTTCCAAGTTGATGGACGGGATGGGGG--CTGCCTTTCTTCACAAGACCCTGTGGGATCCGTGTAATCCAGGGTGCTGTTTTCTTTTCTCTATAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102840623 150 - 106955855 AGCTCTGACCAGCCTGCAGTGTGGCTACCGTAGAAACAGCGATACCGCCCTGCGTGTTCCCAGGTGACGGATGGGATGGGGAACTGGCCCTTCTTCACAAGCTCTTGTGGCATCTGTGTAATCCAGGGTGCTGTTTTTTTCTCTATATAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55200307 150 + 59248254 GGCTCTGACCAGCCTGCTGTGTGGTTACCATAGATACAGCGATACCGCCCTGCGTGCTCCCAGGTGGTGGATGGGATGGGAAACTGGCCCTTCTTCACAAGCTCCTGTGGGATCCGTGTAATCCAGGGTGCTGTTTTTTCTTCTCTATAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47307273 150 + 51301725 CGCTCTGACCAGCCTGCCATGTGGCTACCATAGATACAGCGATACCGCCCTGCGTGCTCCCAGGTGGTGGATGGGATGGGGAACTGGCCCTTCTTCACAAGCTCCTGTGGGATCCGTGTAATCCAGGGTgctgttttttcttctctatat i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45527086 147 + 49145316 GGCTCTGACAAGC---CAGTGTCGCTATAATACTGACAGTGATACTGCCCTGCGTGTTGCCAGGCGATGGACTCGATGGGGAACTGGCCCTTCTTCACAAGCTCCTGTGGGATCTGCTTAATCCAGGATGCTGATGCTTTTTTTATATAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19705838 147 - 122678785 GGATTAGACCAG---GCAGTGGTGATTCTATAGTAACAGTGATATTGTCCTGCATGTACATCTGTCATGTGTGTGATGGAGAACTTGGCCTTGTCCTTGAACTCCAGTTCAGGCTGTCTGTTCCAGGTCCCTGAGTATCTTTCTTTATAC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47001118 20298 + 50890351 T e rheMac3.chr19 60066121 147 + 64156825 I a score=332808.000000 s hg38.chr19_GL949747v2_alt 274410 116 + 729520 AGATGGTACTCCTGCGTCTCCAGGCTCCCCTGACACCTGAGGGTCACAGGACTCCCTTGGGTGATCACAGAGCCTGGCTCAGCCCAGAGGGTGGGCTTGGGGAGGGGCCCTGGAAG s panTro4.chr19 59228309 116 + 63644993 AGATGGTACTCCTGCGTCTCCAGGCTCCCCTGACACCTGAGGGTCACGGGACTCCCCTGGGTGATCACAGAGCCTGGCTCAGCCCAGAGGGTGGGCTTGGGGAGGGGCCCTGGAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56056253 116 + 60714840 AGACAGTACTCCTGGACCTCCAGGCTCCCCTGACACCTGAGGGTCATGGGACTCCCCTGGGTGATCACAGAGCCTGGCTCAGCCCAGAGGGTGGGCTTGGGGAGGATCCCTGGAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102840773 116 - 106955855 AGACGGTACTCCTGGGTCTCCAGGCTCCCCTGACACCTGAGGGTCACGGGACTCCCCTGGGTGATCACAGAGCCTGGCTCAGCCCAGAGGGTGGGCTTGGGGAGGAGCCCTGGAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60066268 116 + 64156825 AGATGGTAACCCTGGGTATCCAGGGTCCCCTGGCACCAGAGGGTCACGGAGCTCCCCCAGCTGATCACAGAGCCTGGCTCAGCCCAGAGGCTGGGTTTGGGGAGGATCCCTGGAAG i rheMac3.chr19 I 147 I 358 s macFas5.chr19 55200457 116 + 59248254 AGACGGTACTCCTGGGTCTCCAGGCTCCCCTGACACCTGAGGGTCATGGGACTCCCCTGGGTGATCACAGAGTCTGGCTCAGCCCAGAGGGTGGGTTTGGGGAGGGTGCCTGGAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47307423 116 + 51301725 agACGGTACTCCTGGGTCTCCAGGGTCCCCTGACACCTGAGGGTCACGGGACTCCCCTGGGTGATCACAGAGTCTGGCTCAGCCCAGAGGGTGGGTTTGGGGAGGGTGCCTGGAAG i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45527233 116 + 49145316 AGATGATACTCCTGGGCTTCCAGGTTCCCCTGACACCTGAGGGTCACAGGACTCCCCTGGGGGATCACAGAGCCTGGCTCAGCCCAGAGGGTGGGCTTGGGGAAGGTCCCTGGCAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19705985 116 - 122678785 AGGAGGTACTCTTGGGCCTTCAGGCTCCCCTGACACCAGATGGTCACAGGTGCCTCCCAGGGGACCACAGAGCCTGGCTCAGCCCAGATGGTGGGTTTGGGGAGGGTCCCTGGAAG i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47001118 20298 + 50890351 T a score=651782.000000 s hg38.chr19_GL949747v2_alt 274526 339 + 729520 GAAATCAGAGTTCAGATTCTAAGTCATTTCCC-----ACCCAACAGATCTCAGCTCTCAGCTGCAGGACCCTCCAGACACCCCCATCAGTCAGCCCAGAACTGCTATTCCCCATCCCCAGCTGCACAGGGGTGGCCCCTTGTCCCCGGTGAGGAGGAGGGACTTGGGACAGCTAGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGTCCAGGCTCAGCCCTGGAAGAGAGTTCCCTATGAGGAATTTGCCCCTGAAGCCTGAGCAGGTCCTCCCCTCCCTGGGATCTTTGTGAGCCCCTGGGGTCTCCTTAGGGACAAGAGTTTGGCTGTGGGGTGAGGT s panTro4.chr19 59228425 339 + 63644993 GAAATCAGAGTTCAGATTCTAAGTCATTTCCC-----ACCCAACAGATCTTAGCTCTCAGCTGCAGGACCCTCCAGACACCCCCATCAGTCAGCCCAGAACTGCTATTCCCCATCCCCAGCTGCACAGGGGTGGCCCCTTGTCCCCGGTGAGGAGGAGGGACTTGGGACAGCTAGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGTCCAGGCTCAGCCCTGGAAGAGAGTTCCCTATGAGGAATTTGCCCCTGAAGCCTGGGCAGGTCCTCCCCTCCCTGGGATCTTTGTGAGCCCCTGGGGTCTCCTTAGGGACCAGAGTTTGGCTGTGGGGTGAGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56056369 339 + 60714840 GAAATCAGAGTTCAGATTCTAAGTCATTTCCC-----ACCCAACAGAGCTCAGCTCTCAGCCTCAGGACCCTGCAGACACCCCCATCAGTCAGCCCTGAACTGCTATTCCCCGTCCCCAGCTGCACAGGGGTGGCTCCTTGTCCCCAGTGAGGAGGAGGGACCTGGGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGTCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGGGATTTGCCCCTAAAGTCTGAGCAGATCCTCCCCTCCTTGGGATCTTTGTGAGCCCCTGGGGTCTCCTTAGGGACAAGAGTTTGGCTGTGGGGTGAGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102840889 342 - 106955855 GAAATCAGAGTTCAGATTCTAAGTCATTTCCCACCCAACCCAACAGATTCCAGCTCTCAGCC-CAGGACCCTCCAGACGCCCCAGTCAGTCAGCCCAGAACCGCTATTCCCCATCCCTAGCTGCACGGAGGTGGCCCCTTGTCCCCAGTGAGGAGGAGGGACCTGGGAGAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGCGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGGGATTCGCCCCTGAAGCCTGGGCAGGCCCTCCCCTCCCTGGGATCTTTGTGAGCCCCTGGGGT-TCCTTAGGGATCAGAGTTTGGCTGTGGGGTGAGGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55200573 343 + 59248254 GAAATCAGAGTTCAGATTCTAAGTCATTTCCTACCCAACCCAACAGATTCCAGCTCCCAGTC-CAGGACCCTCCAGATGCCCCCATCAGTCAGGCCAGATCTGCTATTCCCCGTCCCCAGCTGCACGGGGGTGGCCCCTTGTCCCCAGTGAGGAGAAGGGACCTGGGACATCTGGGGACAGACTCACCTGCCTGCACACAGGTCCTCCGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCCCTGAAACCTGAGCAGGTCCTCCCCTCCCTGGGATCTTTGTGAGCCCCTGGGGTCTCCTTATGCACCAGAGTTTGGCTGTGCGGTGAGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47307539 343 + 51301725 GAAATCAGAGTTCAGATTCTAAGTCATTTCCTACCCAACCCAACAGATTCCAGCTCCCAGTC-CAGGACCCTCCAGATGCCCCCATCAGTCAGCCCAGATCTGCTATTCCCTGTCCCCAGCTGCACGGGGGTGGCCCCTTGTCCCCAGTGAGGAGAAGGGACCTGGGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGAGGTCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCCCTGAAGCCTGAGCAGGTCCTCCCCTCCCTGGGATCTTTGTGAGCCCCTGGGGTCTCCTTATGCACTAGAGTTTGGCTGTGAGGTGAGGC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45527349 335 + 49145316 GAAATCAGAGGTCAGATTCTAAGTCATTTCCA-CCCAACCCAACAGATTCCAGCTCTCAGACACAAAACCCTCCAGA--CCCCCATCAGTCAGCCCAGAACTGCTGTTCCCC-TCCCCAGCTGCATGGGGGTGG-GCCTTATCCCCAGTGAGGA----GGACCTGGGCCAGCTGGGGACAGACTCACCTGCCTGCATGTGTGTCCTGGGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCCCTGAGAGATTTGCCCCTGAAGCCTGAGCAGGTCCTCCCCTCCCTGGGGTCTTTGTGAGCCCCTGGGGTCTCCTCATGGTCCAGAGTTTGGCTCTGGGGTGAGGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19706101 315 - 122678785 -GAAACAGAGGCTGCGTCACAAGACCCTTCCC-----ACCCCCAATATCCAAACCCCCAGAG-GGGGACCCTCTC--------------TCAGCCCAGAGCTGCTGATCTCC-TTCCTCCCTGCCTGGTGGGTGTTCTCTGTCCCCAGTGAGGAGGTGGGA-GTGGGATCCCTGGGGACAGACTCACCTGCCTGCACTTGGGTCCTGGAGCCCACACTCAGCCCTGGAAGAGAG-TCCCTGTGAGAGGTTTGCCCC-AAATCCTGAACAGAACCCCTCCTCTCCATGAGCCCCCTGAG--CCTGGGATCT-CTGACAGGCCAGGGCCTGGCTGTGGGGC-AGGT i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47001118 20298 + 50890351 T e rheMac3.chr19 60066384 358 + 64156825 I a score=640843.000000 s hg38.chr19_GL949747v2_alt 274865 239 + 729520 CCCTCCTAG-GTTAGAAGCT-CCCTCCCTCTTCAAATCTCACCGAGACAGATCAGGACCGTGAGGATGGGGGTCATGG-CGTCTCCTCCCACT-GCACTGCTCTGTGGATGGATGAGCCCTCGGTGCTGGCAGGACAGAG-GACACACAGGGTGTGGACACTTGGAGGCTCGGTCCTTCTTCTCATGGGGTTTTGTCATCTGCAGCCACACAGGAAGTGGAACTGCCC-T-CCCAGGAGCCTGGCT s panTro4.chr19 59228764 239 + 63644993 CCCTCCTAG-GTTAGAAGCT-CCCTCCCTCTTCAAATCTCACCGAGACAGATCAGGACCGTGAGGATGGGGGTCATGG-CGTCTCCTCCCACT-GCACTGCTCTGTGGATGGATGAGCCCTCGGTGCTGGCAGGACAGAG-GACACACAGGGTGTGGACACTTGGAGGCTGGGTCCTTCTTCTCATGGGGTTTTGTCATCTGCAGCCACACAGGAAGTGGAACTGCCC-T-CCCAGGACCCTGGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56056708 241 + 60714840 CCCTTCTAG-GTTAGAAGCTCCCCTCCCTCTTCAAATCTCACCGAGACAGATCAGGACCACGAGGATGGGTGTCATGG-CGTCTCCTCCCACT-GCCCTGCTCTGCAGATGGATGAGCCCTCGGTGTTGGCAGGACAGAGAGACACACAGGGTGTGGACACTCAGAGGCTGGGTCCTTCTTCTCATGGGGTTTTGTCATCTGCAGCCACACAGGAAGTGGAACTGCCC-T-CCCAGGAGCCTGGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102841231 241 - 106955855 CCCTCCTAG-GTTAGAAGCT-CCCTCCCTCTTCAAATCTCACCGAGACAGATCAGGACCGTGAGGATGGGGGTCATGG-CGTCTCCTCCCACT-GCCCTGCTCTGCAGATGGATGAGCCGTCGGTGCTGGTGGGACAGAGAGACACACAGGGTGTGGACACTCGGAGGCTGGGTCCTTCTTGTAATGGGGTTTTGTCATCTGCAGCCACACAGGAAGTGGAACTGCCC-TCCCCAGGAGCCTGGCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60066742 240 + 64156825 CCCTCCTAG-GTTAGAATCTCCCCTCCCTCTTCAAATCTCACCGAGACAGATCAGGACCGTGAGGATGGGGGTCATGG-CATCTCCTCCCACT-GCCCTGCTCTGTAGATGGATGAGCCCTCGGTGCTGGCAGGACAGAG--ACACACAGGGTGTGGACACTCAGAGGCTGGGCCCTTCTTGTCAAGGGATTTTGTCATCTGCAGCCACACAGGAAGCGGAACTGCCC-TCCCCAGGAACCTGGCT i rheMac3.chr19 I 358 C 0 s macFas5.chr19 55200916 235 + 59248254 CCCTCCTAG-GTTAGAATCTCCCCTCCCTCTTCAAATCTCACCGAGACAGATCAGGAGCGTGAGGATGGGGGTCATGG-CGTCTCGTCCCACT-GCCCTGCTCTGCAGATGGATGAGCCCTCGGTGCTGGCAGGACAGAG----ACATGGGGTGTGGCCACTCGGAGGCTGGGTCCTTCTTAT---GGGGTTTTGTCATCTGCAGCCACACAGGAAGTGGAACTGCCC-TCCCCTGGAACCTGGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47307882 235 + 51301725 CCCTCCTAG-GTTAGAATCTCCCCTCCCTCTTCAAATCTCACCGAGACAGATCAGGACCGTGAGGATGGGGGTCATGG-CGTCTCCTCCCACT-GCCCTGCTCTGCAGATGGATGAGCCCTCGGTGCTGGCAGGACAGAG----ACACAGGGTGTGGCCACTCGGAGGCTGGGTCCTTCTTAT---GGGGTTTTGTCATCTGCAGCCACACAGGAAGTGGAACTGCCC-TCCCCAGGAACCTGGCT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45527684 240 + 49145316 CCCTCCTAG-GTTAGAATTTCCCCTCCCTCTTCAAATCTCACCGAGACAGATCAGGACCATGAGGATGGGGGTCATGG-CGTCTCCTCCCACT-GCCCTGCTCTGCGGATGGATGAGCCCTCGGTGCTGGCAGGACAGAG--AGACACAGGGTGTGGACACTCAGAGGCTGGGTCCTTCTTTTCATGGGGTTATGTCATCTGTAGCCACACAGGAAGCAGAACTGCCC-TCCCCAGGAGCCTGGCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19706416 244 - 122678785 CCCTCCCAGAGTAAGGCATTCCCTCCCCTCCTTGGCTCTCACCTAGACAGAGCAGAACCGTGAGGGCGGGGGTCATGGCCGTCTCCTCTCTCTGGCCCAGCTCTAAAGATGGA-GGGACCTCGGTGCCTGCAGGACAGATAGACACACAGGGTGTGGCCACTCAGA-GCCCAGTCCTCACTGTCACGGGGTTATCACATCATCAGCCCCACAGGAAGGGGAACAGCCAGTCCCCAGAGGCCTAGCC i canFam3.chr1 C 0 I 42 e chlSab2.chr6 47001118 20298 + 50890351 T a score=327150.000000 s hg38.chr19_GL949747v2_alt 275104 153 + 729520 GTCTTTCCTGTAGGGCTGAGGTGGGGGTGGGC-CCAACTCCTCTATAGACATTTCAGACAGAAATGGGGTCTTTCCTGACCCCCAGCCACTGTCTGTCTGCCTTGTCTTCATCTCACTAAGACCTGGGATGCAGCAGGAAAAAGAACCAATGCT s panTro4.chr19 59229003 152 + 63644993 GTCTTTCCTGTAGGGCTGAGGTGGGGGTGGGC-CCAACTCCTCTACAGACATTTCAGACAGAAATGGGGTCTTTCCTGA-CCCCAGCCACTGTCTGTCTGCCTTGCCTTCATCTCACTAAGACCTGGGATGCAGCAGGAAAAAGAACCAATGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56056949 153 + 60714840 CTCTTTCCTTTAGGGTTGAGGTGGGGGAGGGC-CCAACCCCTCTATAGACATTTCAGACAGAAATGGGGTCTTTCCCGACCCCCAGCCACTGTGTGTCTGGCTTGCCTTCATCCCACTAAGACCTGGGATGTAGCAGAAAAAAGAACCAGTGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102841472 153 - 106955855 CTCTTTCCTTTAGGGCTGAGGTGGGGGCGGGC-CCAACCCTTCTATAGACATTTCAGACAGAAATGGGGTCTTTCCTGACCCGCAGCCACTGTCTGTCTGGCTTGCCTTCATCTCACTAAGACCTGGGATGTGGCAGGAAAAAGACCTGGTGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60066982 154 + 64156825 GTCATTCCTTTAGGTCTGAGGTTGGGGCAGGCACCAGGCCCTCTGCAGACATTTCAGACAGAAATGGGGTCTTTCCTGACCCCCAGCCACCGTCTGTCTGGCTTGCCTTCATCTCGCTAAGACCTGGGATGTAGCAGGAGAAAGAACTGATGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55201151 153 + 59248254 GTCATTTCTTTAGGTCTGAGGTAGGGGCAGGC-CCAACCCCTTTGTAGACATTTCAGACAGAAATGGGGTCTTTCCTGACCCTCAGCCACCATCTGTCTGGCTTGCCTTCATCTCGCTAAGACCTGGGATGTAGCAGGAGAAAGAACTGATGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47308117 153 + 51301725 GTCATTCCTTTAGGTCTGAGGTAGGGGCAGGC-CCAACCCCTTTGTAGACATTTCAGACAGAAATGGGGTCTTTCCTGACCCCCAGCCACCGTCTGTCTGGCTTGCCTTCATCTCGCTAAGACCTGGGATGTAGCAGGAGAAAGAACTGGTGCC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45527924 153 + 49145316 CTCATTTCTTTAGGGCTGAGGTGGGGGTGGGT-CCAACCCCTCTGCAGACATTTCAGACTGTAATGGCATCTTTCCTGACCCCCAGCCACTGTCTGTCTGCTTTGTCCTCATCTCACTGAGAGCCGGGATATAGCAGCAAATAGAACTGGTGCC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19706660 42 - 122678785 I e chlSab2.chr6 47001118 20298 + 50890351 T a score=619233.000000 s hg38.chr19_GL949747v2_alt 275257 267 + 729520 TTCCTGAGTCA-CCCCTTTCAGGTGAGGGCGA----------CCTCCTCCCTCTCACAGCCTCCCT-CAAGGTCTCCCTCCCTCCTTCAGCCCATCCATCAGTTCAGCGTTGTGGGGTCCTTACCATGGCAGTCGTCCCTCCAGCCCTGGAGATCCTTCAGGGAAGATGCAGGTCCATGCTGCAGGGTGGA-CTCAGATCAGCAGAGACGCACCTGACACCTGGCTGTGCAGCCCAGGCTGAGCTGTGTGTGGCAGTGAGAACAGAGGAGAAATGCAGGG s panTro4.chr19 59229155 268 + 63644993 TTCCTGAGTCAGCCCCTTTCCGGTGAGGGCGA----------CCTCCTCCCTCTCACAGCCTCCCT-CAAGGTCTCCCTCCCTCCCTCAGCCCATCCATCAGCTCAGCATTGTGGGGTCCTTACCATGGCAGTCGTCCCTCCAGCCCCGGAGATCCTTCAGGGAAGATGCAGGTCCATGCTGCAGGGTAGA-CTCAGATCAGCAGAGACGCACCTGACACCTGGCTGTGCAGCCCAGGCTGAGCTGCGTGTGGCAGTGAGAACAGAGGAGAAATGCAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56057102 268 + 60714840 TTCCTGAGTCATCCCCTTTCAGGTGAGGGTGA----------CCTCCTCCCTCTCACAGCCTCCCC-CAAGGTCTCCCTCCCTCCTTCAGCCTGTCCATCAGCTCAGCGTTGTGGGATCCTTACCATGGCAGTCGTCCCTCCAGCCCTGGAGATCCTTCAGGGAAGATGCAGGTCCACGCTGCAGGGTAGA-CTCAGATCAGCAGAGACGCACCTGACACCTGGCTGTGCAGCCCAGGCTGAGCTGCATGTGGCAGTGAGAACAGAGGAGAAATGCAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102841625 268 - 106955855 TTCCTGAGTCAGCCGCTTCCAGGTGAGGGCGA----------CCTCCTCCCTCTCACAGCCTCCCC-CAAGGTCTCCCTCCTTCCTTCAGCCTGTCCATCAGCTCAGCGTTGTGGGCTCCTTACCATGGCAGTCGTCCCTCCAGCCCTGGAGATCCTCCAGGGAAGATGCAGGTCCATGCTGCAGGGTAGA-CTCAGATCAGCAGAGACGCACCTGACACCTGGCTGTGCAGCCCGGGCTGAGCTGCGTGTGGCAGTGAGAACAGAGGAGAAATGCAGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60067136 277 + 64156825 TTCTTGAGTCAGCCCCTTTCAGGCGAGGGCGA-CCGTGGGCTCCTCTTCCCTCTCAGAGCCTCCCCATGGGGTCTCCCTCCCTCCTCCAGCCCGTCCATCGGCTCAGCGTCGTGGGGTCCTTACCATGGCAGTCGTCTCTCCGGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGCTGCA-GGCAGA-CCCAGGTCAGCAGAGACGCACCTGACACCGGGCTGTGCAGCCCAGGCTGAGCTGCGTGTGGCAGTGAGCACAGAGGAGAAATGCAGGG i rheMac3.chr19 C 0 I 522 s macFas5.chr19 55201304 277 + 59248254 TTCTTGAGTCAGCCCCTTTCAGGCGAGGGCGA-CCGTGGGCTCCTCTTCCCTCTCAGAGCCTCCCCATGGGGTCTCCCTCCCTCCTTCAGCCTGTCCATCAGCTAAGCGTCGCGGGGTCCTTACCATGGCAGTCGTCTCTCCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCACGCTGCA-GGCAGA-CCCAGGTCAGCAGAGACGCACCTGACACCGGGCTGTGCAGCCCAGGCTGAGCTGCGTGTGGCAGTGAGAACACAGGAGAAACGCAGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47308270 277 + 51301725 TTCTTGAGTCAGCCCCTTTCAGGCGAGGGCGA-CCGTGGGCTCCTCTTCCCTCTCAGAGCCTCCCCATGggatctccctccctccttcagccCGTCCATCGGCTCAGCGTCGCGGGGTTCTTACCATGGCAGTCGTCTCTCCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGCTGCA-GGCAGA-CCCAGGTCAGCAGAAACGCACCTGACACCTGGCTGTGCAGCTCAGGCTGAGCTGCGTGTGGCAGTGAGCACAGAGAAGAAATGCAGGG i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45528077 276 + 49145316 TTCCTGTATCTGCC-CTTCCAGATGAGGGTAAGCTAAGGATTCCCGTTCCTTCTCACAGCCTCCCA-TGAGGTCTCCCTCCCTCCTTCAGCCTGTCCATCAGCACAGCAGTGTGGGGTTCTTACTTAGGCAGTTGTCTCTTCAGCCCTGGACATGCTTCAGGGAAGATGCAGGTCCATGCTCCA-GGCAGG-CTCAGATCAGCAGAGACGCATCTCACATCTGTCTGTGTAGTCCAGGCAGAGCTGTGTGTGGCTGTGGGCACAGAACAGAAATGCAGGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19706702 255 - 122678785 TTCCTGAGATG-TCCTGTCCTGGTGAGGA-GA-TCAGGGCATGTCCTTCCCTCCCAGAGCCTCCCC-CATGGGGTCTCCTCCATTTTCAGCACATCCCT--------------GGGGTCCTCACCATGGACGGGGTC-CTGAGGCC---GAGGTGCTGCTGGGGACATG--GGTTCCTGCTGTGCTGTGGAGCTCATGTCAGCACAGACAGATGTGTGACATCTCTGCGTAAGTCAGG-TGAGGTCACCGAGACAATGAGCCCTGAGGAGAAATACAGGC i canFam3.chr1 I 42 C 0 e chlSab2.chr6 47001118 20298 + 50890351 T a score=98984.000000 s hg38.chr19_GL949747v2_alt 275524 81 + 729520 -AATAAAGAGAGGAAGTCA---TGACCCTCTTTGTGGCCCTGGACTATAGGTTTTCTTTCTAATCAATAGT---------AATCCCCCCC------TTTT s panTro4.chr19 59229423 81 + 63644993 -AATAAAGAGAGGAAGTCA---TGACCCTCTTTGTGGCCCTGGACTATAGGTTTTCTTTCTAATCAACAGT---------AATCCCCCCC------TTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56057370 86 + 60714840 -ACTAAAGAGAGGAAGTCA---TGACCCTCTTTGTGGCCCTGGACTATAGGTTTTCTTTCTAATCAATAGT---------AATCCCCTCCCC-ttttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102841893 87 - 106955855 -AATAAAGAGAGGAAGTCA---TGACCCTCTTTGTGGCCCTGGACTATAGGTTTTCTTTCTAATCAATAGT---------AATCCCCCCCCCGttttttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55201581 79 + 59248254 -AATAAAGAGAGGAAGTCG---TGACCCTCTTTGTGGCCTTGGACTATAGATTTTCTTTCTAATCAATAGT---------AAT-CCCCCC-------TTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47308547 80 + 51301725 -AATAAAGAGAGGAAGTCG---TGACCCTCTTTGTGGCCCTGGACTATAGATTTTCTTTCTAATCAATAGT---------AATccccccc-------TTT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45528353 90 + 49145316 ----AAACAGGGGAAGGAAAGTTGGCTTCTTTCTTGGAACCGGATTTTGGGTTTCCTTTCAACCAAATAGTTCCCATCTCAACTTCCCCT------TTTT i calJac3.chr22 C 0 I 16257 s canFam3.chr1 19706957 67 - 122678785 AAATAAGGAAGGAAATACA-----ACACCTCTCCTGTCCTCCGAGCATGGTATTTCTTTCT-----CTCAC---------AGCTTC-------------- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47001118 20298 + 50890351 T e rheMac3.chr19 60067413 522 + 64156825 I a score=364012.000000 s hg38.chr19_GL949747v2_alt 275605 284 + 729520 TTTTTACTTCCC----------CCCCCTTTTTTT---------TTGGCTACAGCGTCCACCCCTGACGTCCCTGGGAACAAACCTC-TGAGTCTTTCCTGCCTCCTCGGTGCCCATTGCATCCTTG-------GCCGTCCCTCTGCACCTTAATCCCTGTTCAACGT-----TTTGGGAACAATGACTTATATTTGAGCTTTGATTTGGGGAGTGGGGGAGGAAGCTGATATTTAttcagagactggt-tatcattcactgcctacgtgacctcgggcggtaatgaaccatctctgagcctcagtttcttcctttgc s panTro4.chr19 59229504 284 + 63644993 TTTTAAATTCCC----------CCCCCTTTTTTT---------TTGGCTACAGCGTCCACCCCTGACGTCCCTGGGAACAAACCTC-TGAGTCTTTCCTGCCTCCTCGGTGCCCGTTGCATCCTTG-------GCCATCCCTCTGCACCTCAATCCCTGTTCAACGT-----TTTGGGAACAATGACTTATATTTGAGCTTTGATTTGGGGAGTGGGGGAGGAAGCTGATATTTAttcaaagactggt-tatcattcactgcctacgtgacctcgggcggtaatgaaccatctctgagcctcagtttcttcctttgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56057456 294 + 60714840 ttttaacttccctttttttttttttttttttttt---------ttGGCTACAGCGTCCGCCCCTGACATCCCTGGGAACAAACCTC-TGAGTCTTTCCTGCCTCCTCGGTGCCCGTTGTGTCCTTG-------GCCATCCCTCTGCACCTCAATCCCTGTTCAACGT-----TTCGGGAACAATGACTTATGTTTGAGCTTTGATTTGgggagtgggggaaggagctgatatttattcaaagactggt-tatcgtccactgcctacgtgacctcgggcggtaatgaaccatctctgagcctcagtttcttcctttgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102841980 292 - 106955855 tttttacttccc----------tttttttttttttGCTACAGCTTCCCTACAGCTTCCACCCCTGACGTCCCTGGGAACAAAGCTCTTGAGTCTTTCCTGCCTCCTCTGTGCCCGTTGCGTCCTTG-------GCAGTCCCTCTGCACCTCAATACCTGTTCAACGT-----TTTGGGAACAATGAC--ATGTTTGAGCTTTGATTTGGggagtgggggagggagctgatatttattcaaagactggt-tatcatccactgcctacgtgacctcgggcggtaatgaacaatttctgagcctcagcttcttcctttgc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55201660 281 + 59248254 TGTTAACTTCCT----------CCCTTTTTGTTT---------T---CTACAACGTCCACCCCTGACCTCCCTGGGAACAAACCTC-TGAGTCTTTCCGGCCTCCTCGGTGCCCCTGGCGTCCTTG-------GCTCTCCCTCTGCACCTCAATCCCTGTTCAACGT-----TTTGGGAACAATGACTTATGTTTGAGCTTTGATTTGGGGAGTGGGGGAGGGAGCTGATATTTATTCAATGACCGGT-tatcatccactgcctacgtgacctcgggcggtaatgaaccatctctgagcctcagtttcttcctttgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47308627 281 + 51301725 TGTTAACTTCcc----------ccctttttgttt---------t---ctacaacGTCCACCCCTGACCTCCCTGGGAACAAACCTC-TGAGTCTTTCCGGCCTCCTTGGTGCCCCTTTCGTCCTTG-------GCTGTCCCTCTGCACCTCAATCCCTGTTCAACGT-----TTTGGGAACAATGACTTATGTTTGAGCTTTGatttggggagtgggggagggagctGACATTTATTCAATGACCGGT-TATCATCCACTGCCTACGTGACCTCGGGCGGTAGTGAaccatctctgagcctcagtttcttcctttgc i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19707024 273 - 122678785 CATGGACTTCTC----------AATTTTCCTGTG---------------ACATCCTCCACATCC--CCTTCCTCGGAACACACCTC-CAAGTCTATCCAG-CTCATTAATACCCCTTGT-TCCTGGGGACAGAGCCATCC--TTGCATAGGGGGTCCTGT---ATGTAGGAGTTAGGGGACATTTATTTGggttatggctctgatt------atgaaggaagatg--gaccttctttgaaacaattctgcatcatccactgcctgcatgactttgggcagtaatatccttgctctgagcctcag-ttccccatctgt i canFam3.chr1 C 0 C 0 e calJac3.chr22 45528443 16257 + 49145316 I e chlSab2.chr6 47001118 20298 + 50890351 T e rheMac3.chr19 60067413 522 + 64156825 I a score=61328.000000 s hg38.chr19_GL949747v2_alt 275889 50 + 729520 aGCTTGTTGTCACAAATCCCACTGGTCACAGTGGTTGTGG------GGTCAGTGGT s panTro4.chr19 59229788 50 + 63644993 aGCTTGTTGTCACAAATCCCACTGGTTACAGTGGTTGTGG------GGTCAGTGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56057750 35 + 60714840 aGCTTGTTGTCACAAATCCCACTCATCA---------------------CAGTGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102842272 50 - 106955855 agcttgttgtcacaaatcccactcatcacagtggttgtgg------ggTCAGTGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60067935 50 + 64156825 AGCCTGTTGTCATGAACCCCACTCATCACAGTGGCTGTGG------GGTCAGTGGT i rheMac3.chr19 I 522 I 90710 s macFas5.chr19 55201941 50 + 59248254 aGCTTGTTGTCGCAAATCCCACTCGTCACCATGGTTGTGG------GGTCAGTGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47308908 37 + 51301725 aGCTTGTTG-------------TCGTCACCGTGGTTGTGG------GGTCAGTGGT i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19707297 55 - 122678785 gggatgTTGTCCTGAACTGCA-GCTCCAGTGTGGTTGTGGCAATTTGGTGTCAGGT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45528443 16257 + 49145316 I e chlSab2.chr6 47001118 20298 + 50890351 T a score=487426.000000 s hg38.chr19_GL949747v2_alt 275939 310 + 729520 TCCTGACACA-TGGGAGAGGCTCATCTGTGCTTCATTTCCAGACCAGGTCAGCA---CATGAAGT-GTTTGGGATA---TGATAGGATCATAG----------------CGTTG------------------GATGATTGATGTGTTCTCTCAAGATCTCATAT-CTGGGATCCCTAATGGAGAAATGTACGTGAAGTATTTCTGAAATATGCAGAACATCAATATCATGA-GCAGAAAAA--------------------GAGGCGTGGAAGTCTCCAAGTGTAGATGGATCCACATTAAATAACAGAGGCCAGAGGTGAGTCGCCACAGGTGCCTGGGACCATCAAGGGGTCATTAGGGTGGAGGTTTCCAC s panTro4.chr19 59229838 310 + 63644993 TCCTGACACA-TGGGAGAGGCTCATCTGTGCTTCATTTCCAGACCAGGTCAGCA---CATGAAGT-GTTCGGGATA---TGATAGGATCATAG----------------CGTTG------------------GATGATTGATGTGTTCTCTCAAGATCTCACAT-CTGAGATCCCTAATGGAGAAATGGACATGCAGTATTTCCGAAATATGCAGAACATCAATGTCATGA-GCAGAAAAA--------------------GAGGCGTGGAAGTCCCCAAGTGTAAATGGATCCACATTAAATAACAGAGGCCAGAGGTGAGTCGCCACAGGTGCCTGGGACCGTCAAGGGGTCATTAGGGTGGAGGTTTCCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56057785 310 + 60714840 TCCTGGCACA-TGGGAGAGGCTCATCTGTGCTTCATTTCCAGACCAGGTTAGTA---CATGAAGT-GTTTGGGATA---TGATAGGATCATAG----------------CGTTG------------------GATGATTGACGTGTTCACTCAAGATCTCACAT-CTGAGATCCCCAATGGAGAAATGTACATGCAGTATTTCTGAAATATGCAGAATATCAATGTCATGA-GCAGAAAAA--------------------GAGGCGTGGAAGTCCCCAAGTGTAGATGGATCCGCATTAAATAACAGAGGCCAGAGGTGAGTCGCCACACATGCCTGGGACCATCAAGGGGTCATTAGGGTGGAGGTTTCCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102842322 310 - 106955855 TCCTGGCACA-TGGGAGAGGCTCATTTGTGCTTCATTTCCAGACCAGGTTAGTA---CATGAGGT-GTTTGGGATA---TGATAGGATCATAG----------------CGTTG------------------GATGACTGATGTGTTCACTCAAGATCTCACAT-CTGAGATCCCTAATGGAGAAATGTACATGCAGTATTTCTGAAATATGCAGAACATCAATGTCATAA-GCAGAAAAA--------------------GAGGTGTGGAAGTCCCCAAGTGTAGATGGATCCACATTAAATAACAGAGGCCAGAGGTGAGTCGCCACAGGTGCCTGGGACCATTAAGGGGTCTTTAGGGTGGAGGTTTCCAC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55201991 331 + 59248254 TCCTGGGACA-TGGGAGAGGCTCCTTGGTGCTTCATTTCCAGACCAGGTGAGGA---CATGAGGT-GTTTGGGATA---TGATAGGATCAGAG----------------CGTTG------------------GATGATTGATGTGTTCACTCGAGATCTCACAT-CTGAGATCCCTAATGGAGAAATCTACAGGCAGCATTTCTGAAATACGCAGAACATAACTGTCAAGAGGCATGGAAGCCCCCAAGTGTAGATGTCATGAGGCATGGAAGTCCCCAAGTGTAGATGGATCCACATTAAATAACGGAGGTCAGAGGTGGGTCGCCACAGGTGCCCAGGACCCTCACGAGGTCATTAAGGTGGAGGTTTCCAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47308945 331 + 51301725 TCCTGGGACA-TGGGAGAGGCTCCTTGGTGCTTCATTTCCAGACCAGGTGAGGA---CATGAGGT-GTTTGGGATA---TGATAGGATCAGAG----------------CGTTG------------------GATGATTGATGTGTTCACTCGAGATCTCACAT-CTGAGATCCCTAATGGAGAAATCTACAGGCAGCATTTCTGAAATACGCAGAACATCAGTGTCATGAGGCATGGAAGCCCCCAAGTGTAGATGTTATGAGGCATGGAAGTCCCCAAGTGTAGATGGATCCACATTAAATAACGGAGGTCAGAGGTGGGTCGCCACAGGTGCCCAGGACCCTCACGAGGTCATTAAGGTGGAGGTTTCCAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46980820 325 + 50890351 GCCTGGGACATTGGGAGGGGCTCATTTGTGCCTGATTTCCAGAGCAGGGTAAGA---CCTGAGGT-GCTTGGGACA---TGAGAGGATCTTAG----------------TGTTGGACTCCACAGTCTACGTAGATGATTGATGTTTCCACTTAAGATGTCACAT-CTGA---CCCTAATGGAGAAATGTGCATCAGGTGTTTCTGAAATACCCAGAGCATCAAGGTCATGA-GCACAAAAA--------------------GACATGTGGAAG-CCCTGAGTGTAGAAGGAGCCACAAGAAAGAACAGAGGCCAGAGGTGAGATGCCACAGGGTCCTGGCACCATCAAGGGCTCATTAGGGTGGAGGTTTCCGC i chlSab2.chr6 T 20298 C 0 s canFam3.chr1 19707352 315 - 122678785 ----------CCCAGAAGGGATGGGTTGCAGTGAGTTTCCAGATCAGGTAAGAACAGCATGGGCTGGTTCCTGATATGCTGATGGGATCCCATGGCAGACTCTGCAGTCCGGTG------------------GCTGTTTCGTGTGCCCACTGGAGACCTTGTCTGCTTAGAATCCCA----GGACTGCCACTTACAGTATGTGTGGAGTATGCAG----TCACAGACACAT-GCAGAGAAG--------------------CAGGAAATGAAATTTGCAGATAGAGGTGGAACC-CAGCAGGAAATAGGGAACTCAGCTGAGTCCTCATTGGTTTCTGGGACCTTGGAGGAGTTG-AAGGGAGGGTGTTTCTAC i canFam3.chr1 C 0 I 37863 e calJac3.chr22 45528443 16257 + 49145316 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=4011.000000 s hg38.chr19_GL949747v2_alt 276249 2 + 729520 Ca s panTro4.chr19 59230148 2 + 63644993 Ca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56058095 2 + 60714840 Ca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102842632 2 - 106955855 Ca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55202322 2 + 59248254 Ca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47309276 2 + 51301725 CA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46981145 2 + 50890351 CA i chlSab2.chr6 C 0 I 27447 e canFam3.chr1 19707667 37863 - 122678785 I e calJac3.chr22 45528443 16257 + 49145316 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=289007.000000 s hg38.chr19_GL949747v2_alt 276251 179 + 729520 aaggtggcccaaagtgattagactcaacatgccagacctgccttgg----tttactacggagaaagagattcaaatgtttaggaaggttaaaatgttagagaggagttgtcattcaagacggcctcatctaaattggaagagtctagaagatctatctttcttttctt-----------ttttttt---tttttttt s panTro4.chr19 59230150 187 + 63644993 aaggtggcccaaagtgattagactcaacatgccagatctgccttgg----tttactacagagaaagagattcaaatgtttaggaaggttaaaatgttagagaggagttgtcattcaagacgggctcatctaaattggaagagtctagaagatctatctttcttttctt---ttcttttcttttctt---tttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56058097 177 + 60714840 aaggtggcccaaagtgattagactcaaaatgccagacctgccttgg----tttactacagagaaagagattcaaatgtttaggaagattaaaatgttagagaggagttgtcattcaagg-gggctcatctaaattggaagagtctagaagatctatctttctatttt------------tttttta---tttttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102842634 190 - 106955855 aaggtggcccaaagtgattagactcaaaatgccagacctgccttgg----tttactacagagaaagagattcaaaggtttaggaagattaaaatgttagagaggagttgtcattcaagatgggctcatctaaataggaagagtctagaagatctatctttctttcttttcttttcttttttttttt---tttttttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55202324 185 + 59248254 aaggtggcccaaagtgattagactcaaaatgccagacctgccttggtttatttactatagagaaacggattcaaatgtttaggaagattgaaatgttagagaggagttgtcattcaaaa-ctcctcatctaaattggaagagtctagaagatgtatctttcttttttt-----------ctttttcttttttttttt i macFas5.chr19 C 0 I 8 s papAnu2.chr19 47309278 182 + 51301725 AAGGTGGCACAAAGTGATTAGACTCAAAATGCCAGACCTGCCTTGGTTTATTTACTATAGAGAAACGGATTCAAATGTTTAGGAAGATTGAAATGTTAGACAGGAGTTGTCATTCAAAA-CTCCTCATCTAAATTGGAAGAGTCTAGAAgatgtatctttctttttta-----------ctttttc---tttttttt i papAnu2.chr19 C 0 I 8 s chlSab2.chr6 47008594 178 + 50890351 aaggtggcccaaaatgattagactcaaaatgccagacctgccttgg----tttactatagagaaagggattcaaatgtttaggaagattgaaatgttagagaggagttgtcattcaaaa-ctcctcatctaaattggaagagtctagaagatgtatctttctttttta-----------ctttttc---tttttttt i chlSab2.chr6 I 27447 T 13296 e canFam3.chr1 19707667 37863 - 122678785 I e calJac3.chr22 45528443 16257 + 49145316 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=76948.000000 s hg38.chr19_GL949747v2_alt 276430 42 + 729520 gagatgcagtctcactctgttgcccaggctggagtgcagtgg s panTro4.chr19 59230337 42 + 63644993 gagatgcagtctcactctgttgcccaggctggagtgcagtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56058274 42 + 60714840 gagatgcagtctcactctgttgcccaggctggagtgcagtgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102842824 42 - 106955855 gagatgaagtctcactctgttgcccaggctggagtgcagtgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55202517 42 + 59248254 gagacggagtctcactctgttgcccaggctggagcgcagtgg i macFas5.chr19 I 8 I 54552 s papAnu2.chr19 47309468 42 + 51301725 gagacagagtctcactctgttgcccaggctgaagcgcagtgg i papAnu2.chr19 I 8 T 14809 s chlSab2.chr6 46995476 42 + 50890351 gagacggagtctcactctgttgcccaggctgaagcgcagtgg i chlSab2.chr6 T 13296 I 21211 e canFam3.chr1 19707667 37863 - 122678785 I e calJac3.chr22 45528443 16257 + 49145316 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=1146.000000 s hg38.chr19_GL949747v2_alt 276472 2 + 729520 ca s panTro4.chr19 59230379 2 + 63644993 ca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56058316 2 + 60714840 ca i ponAbe2.chr19 C 0 I 4147 s nomLeu3.chr10 102842866 2 - 106955855 ca i nomLeu3.chr10 C 0 I 1742 e canFam3.chr1 19707667 37863 - 122678785 I e calJac3.chr22 45528443 16257 + 49145316 I e chlSab2.chr6 46995518 21211 + 50890351 I e papAnu2.chr19 47309510 14809 + 51301725 T e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=128628.000000 s hg38.chr19_GL949747v2_alt 276474 1449 + 729520 c---cctcctcctcctcctcctcctccacaccctcctcctcctccttcttctccttctccttctccctctccctctccctctccctctccttcaccttctccttctccttcttcttcttctattttttttttttttttttttttgagacggagtctcgctc-tgtcgcccaggctggagtgcaatggcgtgatctcggttcactgcaacctccgcctccctggttcaagcaattctcctatctcagcctcccaagtagctgggattacaggcacccaccatcatgccaggctaatttttgtatttttagtagaggtggggtttcatcatgttgaccaggctggtctcgaactcctaacctcaagtgatcctcctgccttggcctcccaaagtgctgggattacatgcgtgagccaccatgcTttcttatccagcactgctaataaagaccaccagaaaccattttccttgagcaggcacagccagcaatatacattcactgtcctacctcaggcacataccaactgtttagttctatcccatagtttagttctcaccataatcatcattatcatctcctttcataaaatgttagactgaatcattacattgataaaattatgctggttggaatgcccatcaatgacagactggataaagatactgtggtacatatacaccatggaatactatgcagccataaaaaggaatgagatcatgtcctttgcagggacatggatggagctggaagccattatcctcagcaaacaaacacaggaaccaaaaaccaaacactgcatgttctcattcataagtgggagctgaacaatgagaacacatggacacaggaatggaaacaacacacacttgggcctgttggggggaa-aagggaggaagagcctcaggataaataactaatgggtgccgggtttaatacctaggtgatgggctgatgggtgcaacaaaccaccacagcacacgtttgtttacttatgtaacaaacctgcaggtcctgcacatgtatcccagaacataaaattaaattaaaTTAGATATCAaaaataaaaataaaataaagttaaaaaaagaaattatgctatttggaccaggaaagcaagaagtagcacctattccaaatttattagtaacacatttgcatgacagagggtgagaaataaattccacaaaaatattggagccttccgcctcaacacaatttctgagtccactgatatggaaaatgttgagatgtaacttctaaagcaaaaggtaagttgttgcatctggcccttcctacaaccaaaagaaccatggtacctagtaagcctcttgggttttttttttttttttcctgagacagaattttgctttttttgcccaggctggagtgcagtggcacaatctgggctcactgcaaccgatttcaagcgattctcctgcctcagcctctctag s panTro4.chr19 59230381 1433 + 63644993 ccctcctcctcctcctcctcctcctccacactctcctcctccttctccttctccctctccttctccctctccctctccctctccttctccctctccttctccttctccttcttgttcttcta----------------ttttttgagacagagtttcattcttgttgcccaggctggagtgcaatggcgtgatctcggttcactgcaacctccgcctccctggttcaagcaattctcctatctcagcctcccaagtagctgggattacaggcacccgccatcatgccaggctaatttttgtatttttagtagaggtggggtttcatcatgttgaccaggctggtctcgaactcctaacctcaagtgatcctcctgccttggcctcccaaagtgctgggattacatgcgtgagccaccatgcTttcttatccagcactgctaataaagaccaccagaaaccattttccttgagcaggcacagccagcaatatacattcactgtcctacctcaggcacataccaactgtttagttctatcccatagtttagttctcaccataatcatcattatcatctcctttcataaaatgttagactgaatcattacattgataaaattatgctggttggaatgcccatcaatgacagactggataaagatactgtggtacatatacaccatggaatactatgcagccataaaaaggaatgagatcatgtcctttgcagggacatggatggagctggaagccattatcctcagcaaacaaacacaggaaccgaaaaccaaacactgcatgttctcattcataagtgggagctgaacaatgagaacacatggacacaggaatggaaacaacacacacttgggcctactggggggaagaagggaggaagagcctcaggataaataactaatgggtgcggggtttaatacctaggtgatgggctgatgggtgcaacaaaccaccacagcacacgtttgtttacttctgtaacaaacctgcaggtcctgcacatatatcccagaacataaaataaaattaa-----atatcaaaaataaaaataaaataaagttaaaaaaagaaattatgctatttggaccaggaaagcaagaagtagcacctagtccaaatttattagtaacacatttgcatgacagagggtgagaaataaattccacaaaaatattggagccttctgcctcaacacaatttctgagtccactgatatggaaaatgttgagatataacttctaaagcaaaaggtaagttgttgcatctggcccttcctacaaccaaaagaaccatgatacctagtaagcctcttgggtttttttttttttttttctgagacagaattttgctttttttgcccaggctggagtgcagtggcacaatctgggctcactgcaaccgatttcaagcgattctcctgcctcaccctccctag i panTro4.chr19 C 0 I 756 e canFam3.chr1 19707667 37863 - 122678785 I e ponAbe2.chr19 56058318 4147 + 60714840 I e calJac3.chr22 45528443 16257 + 49145316 I e nomLeu3.chr10 102842868 1742 - 106955855 I e chlSab2.chr6 46995518 21211 + 50890351 I e papAnu2.chr19 47309510 14809 + 51301725 T e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=0.000000 s hg38.chr19_GL949747v2_alt 277923 290 + 729520 tagctgggattacaggtgcccgccctcacgcccagctaatttttgtatttttagtagagacaaggtttcaccatgttggtcaggctggtctcgaactcctgactgcatgatccgcccacctcggcctcccaaagtgctaggattacaggcgtgagccaccgtgcctggccctacctcttggattttgaaagcaacatatttctcatgtgggtgtgctccattagcccatttactaagtgactcaaaaggaggccgggtgcagtggctcatgcctgtaatcccagcacttt e canFam3.chr1 19707667 37863 - 122678785 I e ponAbe2.chr19 56058318 4147 + 60714840 I e calJac3.chr22 45528443 16257 + 49145316 I e nomLeu3.chr10 102842868 1742 - 106955855 I e chlSab2.chr6 46995518 21211 + 50890351 I e papAnu2.chr19 47309510 14809 + 51301725 T e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I e panTro4.chr19 59231814 756 + 63644993 I a score=76654.000000 s hg38.chr19_GL949747v2_alt 278213 833 + 729520 gggaggccgaggtgggcggatcatgaggtcaggagtttgagaccagtctgaccaacatggcaaaactccgtctctactaaaaatacaaaaaattagccaggcatggtagcgggcgcctgtaatcccagctactcaggaggctgaggcaggagaactgcttgaacctgggaggcagaggttgcagtgaaccgagattgtcccattgcattccagcctggacaacactgtgagactccatctcaaaaaaaaaaaaaaagttttgagtggggtgtggaataggggaaggctctgcaacagatccaggtcctgcacaagctcttctgccacctgggccatatgatccagtggaacagatggtgcttgaagtgtcagtggcagatcgagatgctgtttggaggttttgacaagctccttcctataggtgaattggggcttagacacttaggattgtggagcaaaatcctatcatcattcacagatagctagtctccttttgaaaaacaTATATTTTTTTTTgccgggcacagtggctcatgcctgtaatcccagcactttgggagaccaaggtgggcagatcacctgaggtcaggagttcgagaccagcccggccaacatggtgaaaccc-tgtctccactaaaaataaaaaaattagccgggcatggtggcacctgcctgtaatcccagctacttgggaggctgaggcaggagagtcgcttgaacccaggagacggagattgcagtgagccgagatcatgccactgcactctagcctgtgcaagaagggtgagactccatctcaaaaaaaaaaaaaaaggaaaaTATTATATTTTTTT s panTro4.chr19 59232570 833 + 63644993 ggggggcagaggtggggggttcatgaggtcaggagttcgaggccagtctgaccaacatggcaaaactccgtctctactaaaaatacaaaaaattagccaggcatggtagcgggcgcctgtaatcccagctactcaggaggctgaggcaggagaactgcttgaacctgggaggcagaggttgcagtgagccgagattgtcccattgcattccagcctgggcaacactgcgagactccatctcaaaaaaaaaaaaaaagttttgagtggggtgtggaataggggaaggctctgcaacagatccaggtcctgcacaagctcttctgccacctgggccatatgatccagtggaacagatggtgcttgaagtgtcagtggcagatcgagatgctgtttggaggttttgacaagctccttcctataggtgaattggggcttagacacttaggattgtggagcaaaatcctatcatcattcacagatagctagtctccttttgaaaaacaTATATTTTTTTTTgccgggcacagtggctcatgcctgtaatcccagcactttgggagaccaaggtgggcagatcacctgaggtcaggagttcgagaccagcccggccaacatggtgaaacccctgtctccactaaaaataaaaaaattagccgggcatggtggcacctgcctgtaatcccagctacttgggaggctgaggcaggagagtcacttgaacccaggaggcggagattgcagtgagccgagatcatgccactgcactctagcctgtgcaagaagggtgagactccatctcaaaaaaaaaaaaaa-ggaaaataaTATATTTTTTT i panTro4.chr19 I 756 C 0 e canFam3.chr1 19707667 37863 - 122678785 I e ponAbe2.chr19 56058318 4147 + 60714840 I e calJac3.chr22 45528443 16257 + 49145316 I e nomLeu3.chr10 102842868 1742 - 106955855 I e chlSab2.chr6 46995518 21211 + 50890351 I e papAnu2.chr19 47309510 14809 + 51301725 T e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=44200.000000 s hg38.chr19_GL949747v2_alt 279046 164 + 729520 CCATTATTGAGCCTTAGGAGAGACTGGATGCTTGGGCACAGGTCACCAAGGTACCATGAAATGTGAAGTGTGTGTTAGCCGatgcaagctgtataataagatcatgtccactcaggccctgaaagtgtgagcaatttacacaaagcagggggccaaatgcccat s panTro4.chr19 59233403 164 + 63644993 CCATTATTGAGCCTTAGGAGAGACTGGATGCTTGGGCACAGGTCACCAAGGTACCATAAAATGTGAAGTGTGTGTTAGCCGatgcaagctgtataataagatcatgtccactcaggccctgagagtgtgagcaatttacacaaagcagggggccaaatgcccat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56062465 164 + 60714840 CCATTATTGAGCCTTAGGAGAGACTGGATGCTCGGGCATAGGTCACCAAGGCACCGTGAAATGTGCAGTGTGTGTTAGCTGatgcaagctgtataataagatcatgtccactcaggccctgaaagcgtgagtaatttacacaaagcagggggccaaatgcccat i ponAbe2.chr19 I 4147 C 0 e canFam3.chr1 19707667 37863 - 122678785 I e calJac3.chr22 45528443 16257 + 49145316 I e nomLeu3.chr10 102842868 1742 - 106955855 I e chlSab2.chr6 46995518 21211 + 50890351 I e papAnu2.chr19 47309510 14809 + 51301725 T e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=113208.000000 s hg38.chr19_GL949747v2_alt 279210 216 + 729520 ggttcctgtccctgctacacaaccttctgccttccagcctgcacctataatctcatggggatttctctatgctccgttgacagagaaagtgaagactcaagcctggtttgcagatggttctgcacgatatgcagacgccacccagaggttgagagcttcagcacttctgcccctttatgggacatccctaaaagacagtAAAGTCAGGGCGCAAGT s panTro4.chr19 59233567 216 + 63644993 ggttcctgtccctgctacacaaccttctgccttccagcctgcacctataatctcatggggatttctctatgctccgttgacagagaaagtgaagactcaagcctggtttgcagaaggttctgcacaatatgcaggcgccacccagaggttgagagcttcagcgcttctgcccctttatgggacatccctaaaagacagtAAAGTCAGGGCGCAAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56062629 216 + 60714840 ggttcctgcccctgctacacaaccttctgccttccagcctgcatctataatctcatggggatttctctaccatcagttgacagagaaagtgaagactcaatcctggtttgcagatggttctgcacgatctgcaggcgccacccagaggctgagagcttcagcacttctgcccctttatgggacatccctaaaagacagtAAAGTCAGGGCGCAAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102844610 212 - 106955855 ggttCCTGTCcctgctacacaaccttctgccttccagcctgcacctataatctcatagggatttctctacgctcagttgac----aaagtgaagactcaagtctggtttgcagatggttctgcacgatatgcaggcgccacccagaggttgagagcttcagcacttctgcccctttatgggacatccctaaaagacagtAAAGTCAGGGTGCAAGT i nomLeu3.chr10 I 1742 C 0 e canFam3.chr1 19707667 37863 - 122678785 I e calJac3.chr22 45528443 16257 + 49145316 I e chlSab2.chr6 46995518 21211 + 50890351 I e papAnu2.chr19 47309510 14809 + 51301725 T e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=113512.000000 s hg38.chr19_GL949747v2_alt 279426 77 + 729520 GACCCCCTTCCTGAGGACAGAGCCTGCGGCTGGGCGCCTTGAGTGTCCTCTC-ACCTGTCACCACCAGCACCAGGGGG s panTro4.chr19 59233783 77 + 63644993 GACCCCCTTCCTGAGGACAGAGCCTGCGGCTGGACCCCTTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56062845 76 + 60714840 GACCCCCTTCCTGAGGGCAGAGCCTGTGGCTGGGCCCCTTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCA-GGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102844822 76 - 106955855 GACTCCCTTCCTGAGGACAGAGCGTGTGGCTGGGCCCCTTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCA-GGGG i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47016729 77 + 50890351 GACCCCCTTCCTGAGGGCAGAGCCGGGGGCTGGGACCCCTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGGGGG i chlSab2.chr6 I 21211 I 121 s calJac3.chr22 45544700 76 + 49145316 GAGCCCCTTCCTGAGGGCAGATCCTGGGGCTGGGACCCCTGAGTG-ACTCTC-ACCTGTCACCACCAGCTCCAGGGGA i calJac3.chr22 I 16257 C 0 s canFam3.chr1 19745530 76 - 122678785 GACCCCCTTCCTGAGGGCAGCACCTGGGGCTGGG--CCCTGAATGGGCTCGCAACATGTCACCAGCAGCTCCAGGGAG i canFam3.chr1 I 37863 C 0 e papAnu2.chr19 47309510 14809 + 51301725 T e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=89528.000000 s hg38.chr19_GL949747v2_alt 279503 123 + 729520 GTCACTGTGCCCTGACCGGCCTGTGGCACTTTGATAATAACAGTGACAGTTCTCTGCATTGTGCTCTGGCTTGTGTGAGATATGGGTCCTGGTCTTGTTCCCAGGCCCCAGTGGTTTCCTTAA s panTro4.chr19 59233860 123 + 63644993 GTCACTGTGCCCTGACCGACCTGTGGCACTTTGATAATAACAGTGACAGTTCTCTGCATTGTGCTCTGGCTTGTGTGAGATATGAGTCCCGGTCTTGTTCCCAGGCCCCAGTGGTTTCCCGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56062921 123 + 60714840 GTCGCTGTGCCCTGACCGGCCTGTGGCACTTTGATAATAACAGTGATATTTCTCTGCATTGTGCTCTGGCTTGTGTGAGTTATAGGTTCTGGTCTTGTTCCCAGGCCCCAGTGGTTTCCTTAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102844898 123 - 106955855 GTCGCTGTGCCCTGACCGGCCTGTGGCACTTTGATAATAACAGTGATATTTCTCTGCATTGTGCTCTGGCTTGTGTGAGATATGGGTCCTGGTCTTGTTCACAGGCCCCAGTGGTTTCCTTAA i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45544776 119 + 49145316 -TCACTGGGCTTGGACCAGCCAGAGTGGCTGTAATACTGACAGCGATACTGCCCTGCGTGTTGCCAGGCGATGGACTGGATGGGGAACTGGCCCTTCTTCACAAGCTCCCGTGGGATCCA--- i calJac3.chr22 C 0 I 2 s canFam3.chr1 19745606 121 - 122678785 -TCACTGGGCTCTGGCCACTCAGTGGTGCTTCCATAGTAACAGTAATATTGTCCTGCATATACACCTGTCATGTGTGTGATGGAGAACTTAGCCTTGTCCTTGGGCTCTAGTGACTCCTGTC- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47016806 121 + 50890351 I e papAnu2.chr19 47309510 14809 + 51301725 T e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=110464.000000 s hg38.chr19_GL949747v2_alt 279626 94 + 729520 TGTTCTGTGACACTGAGCTT------------------------------CCCTCTTTATCCAGCTGGTGCTCTTGGGGCTCCAGGGTACCCTGACACCAGGTGGTCACAGGCCTCCTCCCAGG s panTro4.chr19 59233983 94 + 63644993 TGTTCTGTGACACTGAGCTT------------------------------CCCTCTTTATCCAGCTGGTGCTCTTGGGGCTCCAGGGTACCCTGACACCAGGTGGTCACAGGCCTCCTCCCAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56063044 124 + 60714840 TGTTCCATGACACTGAGCTTCCCTCTTTATCCAGCTGGTACTCTTGGGCCCCCTCTTTATCCAGCTGGTACTCTTGGGCCTCCAGGATACCCTGACACCAGGTGGTCACAGGCCTCCTCCCGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102845021 94 - 106955855 TGTTCCATGACACTGAGCTT------------------------------CCCTCTTTATGCAGCTGGTACTCTTGGGCCTCCAGGATACCCTGACACCAGGTGGTCACAGGCCTCCTCCCGGT i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47016927 94 + 50890351 TGTTCCAGGGCTCTGGGATT------------------------------CCCTCTTTATCCAGACGGTACTCCTGGGCCTCCAGGGTCCCCCGACACCAGATGGTCACGGGGCTCCCCCGGAT i chlSab2.chr6 I 121 C 0 s calJac3.chr22 45544897 94 + 49145316 TAATCCAGGATGCTGATGCT------------------------------TTTTCTTTATATAGATGATACTCCTGGGCTTCCTGGTCCCCCTGACACCTGAGGGTCACAGGACTCCCCTGGGT i calJac3.chr22 I 2 I 20062 s canFam3.chr1 19745727 94 - 122678785 TGTCCCAAGTCACCGATTGT------------------------------CTCTCTCTATGCAGGCGATATACCTTGGCCTCCAGGCTTCCCTGACACCAGAGGGTCACTGGTGTCCTCCAGGG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47309510 14809 + 51301725 T e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=440062.000000 s hg38.chr19_GL949747v2_alt 279720 340 + 729520 GATCACACAGTCTGGCTCAGTCCAGGTGGTGGGTTTAGTGAGGAGCCTTGAAATGAAATCACAGGTTGGGTCCCAAGATACTAATGCATTCCTCAAATCCCAGCTGTCAGTCCCAAGACCCGCCCAGATGTCCCCA-TCAGTCAGCTCAGAGATGCTGTTCTCCATCCCCAGGTGGCTGG-GGGTGGCCCGTTGTCCCCAGTGAGCAGGAGCGACCTGGGACTGCTGGGGACAGACTCACCTGCCTGCACATGGGTCCTGAAGCTCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCCCTGAAGCCTGAGCAGGTCCTCCCCTGCCTGGGAG s panTro4.chr19 59234077 340 + 63644993 GATCACACAGTCTGGCTCAGTCCAGGTGGTGGGTTTAGTGAGGAGCCTTGAAATGAAATCACAGGTTGGGTCCCAAGATACTAATGCATCCCTCAAATCCCAGCTGTCAGTCCCAAGACCCGCCCAGATGTCCCCA-TCAGTCAGCTCAGAGATGCTGTTCTCCCTCCCCAGGTGGCGGG-GGGTGGCCTGTTGTCCCCAGTGAGCAGGAGCGACCTGGGACTGCTGGGGACAGACTCACCTGCCTGCACATGGGTCCTGAAGCTCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCCCTGAAGCCTGAGCAGGTCCTCCCCTGCCTGGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56063168 340 + 60714840 GATCACACAGTCTGGCTCAGCCTAGGTGGTGGGTTTAGGGAGGAGCCTTGAAATGAAATCACAGGTTGGGTCCCAAGATACTAATGCATCCCTCAAATCCCAGCTGTCAGTCCCAAGACCCGCCCAGACATCCCCA-TCAGTCAGCTCAGAGATGCTGTTCTCCATCCCCAGGTGCCTGG-GGGTGGCCCCTTGTCCCCAGTGAGCAGGAGCAACCTGGGACTGCTGGGGACAGACTCACCTGCCTGCACATGGGTCCTGAGGCTCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAAATTTGCCCCTGAAGCCTGAGCAGTTTCTCCCCCACCTGTGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102845115 340 - 106955855 GATCACACAGTCTGGCTCAGCCCAGGTGGTGGGTTTAGGGAGGGGCCTTGAAATGAAATCACAGGTTGGGTCCCAAGATACTAATGCATCCCTCAAATCCCAGCTGTCAGTCCCAAGACCCGCCCAGAAGTCCCCA-TCAGTCAGCTCAGAGATGCTGTTCTCCATCCCCAGGTGCCTGG-GGGTGGCCCGTTGTCCCCAGTGAGCAGGAGTGACCTGGGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGAGGCTCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCCCTGAAGCCTGAGCAGATCCTCCCCTGCCTGTGAG i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47017021 333 + 50890351 GATCACAGAGCCTGGCTCAGCCCAGAGGGCGGGTTTGTGGAGGGGCCCTGGAAGGAAATCAGAGGCTGGATCCCAAGATGTCCCCACA---CTCAGATCCCAGCTCCCAGCCCCAGGACCC-TTCAGATGTCACCA-TCAGTCA-CCCAGAACTGCTG-TCTCCTCTCCCAGCTGCCCAT-GGGTGGCCCTTTGTCCCCAGTGAGGAGGAGGGACCTAGGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGCCCAGACTCAGACCTGGAAGAGAGTTCCCTATGAGGGATTTGCCCCT-AAACCTGAGCAGACCCTCCCCGCCCTGGGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45565053 324 + 49145316 GATCACGGGACCCGGCTGGGCCCACAAGATGGGTTGGAGTAGTTTCTCTGGGAGGAAATCACAGGTTAGGCCCCAAGATGTC--CCCACCCCTCAGATCCCAGCTCTCAGCCCCA-GACCCCTCCAGACATCCTCA-TCAGTCA----------GCTTTTCTCCATCCCCAGCTGCCCAG-GGGTGACCCCTTGTCCCCAG---ATAGGAGGGACCTGGGACAGCTGGGGACAGACTGACCTGCCTGCACATGGGTCCTGGGGCCCAAACTCAGCCCTGGAAGAGAGTTCCCAGTGAGAGATTTGTCCCCAAAGCCGGAGCAGGTCTTCTTCTTTCCTTGAG i calJac3.chr22 I 20062 T 32917 s canFam3.chr1 19745821 328 - 122678785 GATCACAGAACCAGGCTCAGCCCAGATGGTGGGTTTGGGGAGGGTCCCTGGAAGGAAA-CAGAGGCTGGGTCACAAGACCCT-CTGCA-CCCCCGGTTCCCAGCT--CAGCCCCA--ACCC-CCCAGGTATCCCCACTCTGTCTGCCCAGAGCTGCTGATCACCAGCCCC---TGCCTGGTGGGTGGTCC-CTGTTCTCAGTGAGGAGGTGGGACTGGGACCCCCTGGGGACAGACTCACCTGCCTGCACTCGCGTCCTGGAGCTCATACTCAGCCCTGGAAGAGAG-TCCCTGTGAGAGGTTTGCCTCA-AATCCTGAGCTGAACCCCTCCTCTCCATGAG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47309510 14809 + 51301725 T e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=3205.000000 s hg38.chr19_GL949747v2_alt 280060 3 + 729520 CAT s panTro4.chr19 59234417 3 + 63644993 CAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56063508 3 + 60714840 CAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102845455 3 - 106955855 CAT i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47017354 3 + 50890351 CAT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19746149 3 - 122678785 CCT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45565377 32917 + 49145316 T e papAnu2.chr19 47309510 14809 + 51301725 T e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=5641.000000 s hg38.chr19_GL949747v2_alt 280063 6 + 729520 CCTGAC s panTro4.chr19 59234420 6 + 63644993 CCTGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56063511 6 + 60714840 CCTGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102845458 6 - 106955855 CCTGAC i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47017357 6 + 50890351 GCTAAC i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45532460 6 + 49145316 CCTAGC i calJac3.chr22 T 32917 C 0 s canFam3.chr1 19746152 5 - 122678785 CCTGA- i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47309510 14809 + 51301725 T e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=818714.000000 s hg38.chr19_GL949747v2_alt 280069 654 + 729520 CCCTGAGATTTCCTGATAGACCAGGGCTTGGCTCTGGAGTTAAGTCCCTTCAAGACTAGGGTGCCCC-TTCTCCTCTTGAAATCTCACCAAGTCAGAGTAGGGTTGTGAGGGTGGGAGTCACGGCATCTCCTCCCACTGGCCCCAGCTGTACAGATGGATGAAACCATGGTGTCCAGGAGGACAGACAGACACA-------------CTCAAAGGCTGGGTTCTCCCTGTCATGGGGTTGTCCCATCAGCAG-----CCCCACAGGAAGGGGAACTG-----------------CAGAAGCCTGGCTCTCATTTCCCCAGGGC---------------------------------TGAGGTG----------------------------------------------------------GGAGTGAGCACCAGGTTTCCTGAAGACATTTCAGACAGAAATGGGCTCCCCCTG----ATCCTTGGCTACTGGCTGCAGGATCTTTCCTCATCTTATTGAGGGCTAGGATGTAGTAGAAAAATGGGCCCAG-GGCCTCCCTGAGTGAGCCTCTTC---------------CAGGTGAGGGTAACTGAGGGCTTCTCTTCCCC-TCTCAGAGCCT-CCACATGGGGTCTCCTTTACTCCTTCATCCTGTCTATCAGCACGGGGTTGTGGGGTCCTTACCATGGCCAGTCATCTCATCCGTCGTGGAGATGCTTCAGGGAAAATGCAGGTCCATGGTGCAGGGCAGA-CTCAGGTCAGCAGAGACGCATCTGACATCAGGCTGTG s panTro4.chr19 59234426 654 + 63644993 CCCTGAGATTTCCTGATAGACCAGGGCTTGGCTGTGGAGTGAAGTCCCTTCAAGACTAGGGTGCCCC-TTCTCCTCTTGAAATCTCACCAAGTCAGAGTAGGGTTGTGAGGGTGGGAGTCACGGCATCTCCTCCCACTGGCCCCAGCTGTACAGATGGATGAAACCATGGTGTCCAGGAGGACAGACAGACACA-------------CTCAAAGGCTGGGTTCTCCCTGTCATGGGGTTGTCCCATCAGCAG-----CCCCACAGGAAGGGAAACTG-----------------CAGAAGCCTGGCTCTCATTTCCCCAGGGC---------------------------------TGAGGTG----------------------------------------------------------GGAGTGAGCACCAGGTTCCATGAAGACATTTCAGACAGAAATGGGCTCCCCCTG----ATCCTTGGCTACTGGCTGCAGGATCTTTCCTCATCTTATTGAGGGCTAGGATGTAGTAGAAAAATGGGCCCAG-GGCCTCCCTGAGTGAGCCTCTTC---------------CAGGTGAGGGTAACTGAGGGCTTCTCCTCCCT-TCTCAGAGCCT-CCACATGGGGTCTCCTTTACTCCTTCATCCTGTCTATCAGCACGGGGTTGTGGGGTCCTTACCATGGCCAGTCATCTCATCCGTCATGGAGATGCTTCAGGGAAAATGCAGGTCCATGGTGCAGGGCAGA-CTCAGGTCAGCAGAGACGCATCTGACATCGGGCTGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56063517 643 + 60714840 CCCTGAAATTTCCTGATAGACCAGGGCTTGGCTGTGGAGAGAAGTCCCTTCAAGACTAGAGTG-CCC-TTCTCCTCTTGAAATCTCACCAAGTCAGAGTAGGGCTGTGAGGGTGGGAGTCACGGCATCTCCTCCCACTGGCCCCAGCTGTGCAGATGGATGAAACCATGGTGTCCAGGAGGACAGACAGACACA-------------CTCAAAGGCTGGGTTCTCCCTGTCATGGGGTTGTCCCATCAGCAG-----CCCCACAGGAAGGAGAACTG-----------------CAGAAGCCTGGCTTTCATTTCCCCAGGGC---------------------------------TGAGGTG----------------------------------------------------------GGAGTGAGTATCAGGTTCCCTGAAGACATTTCAGACAGAAATGGGCTCCCCCTA----ATCCTTAGCTACTGGCTGCAGGATCTTTCCTCATCTTATTGAGGGCTAAGATGTAGTAGAAAAATGGGCCCAG-GGCCTTCCTGAGTGAGCCTCTTC---------------CAGGTGAGGGTAACTGAGGGCT-----------TCTCAGAGCCT-CCACATGGGGTCTCCTTTACTCCTTCATCCTGTCTATCAGCACGGGGTTGTTGGGTCCTTACCATGGCCAGTCATCTCATCCGTCGTGGAGATGCTTCAGGGAAAATGCAGGTCCATGCTGCAGGGCAGA-CTCAGGTCAGCAGAGACGCATCTGACACCTGGCTGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102845464 649 - 106955855 CCCTGAGATTTCCTGATAGACT-TGGCTTGGCTGTG-----AAGTCCCTTCAAGACTAGGGTGTCCC-TTCTCCTCTTGAAATCTCACCAAGTCAGAGTAGGGCTGTGAGGGTGGGGGTCATGGCATCTCCTCCCACTGGCCCCGGCTGTGCAGATAGATGAAACCACAGTGTCCAGGAGGACAGACAGACACA-------------CTCAAAGACTGGGTTCTCCCTATCATGGGGTTGTCCCATCAGCAG-----CCCCACAGGAAGGGGAACTG-----------------CAGAAGCCTGGCTCTCATTTCCCCAGGGC---------------------------------CGAGGTG----------------------------------------------------------GGAGTGAGCACCAGGTTCCCTGAAGACATTTCAGATAGAAATGGGCTCCCCCCG----ATCCTTGGCTACTGGCTGCAGGATCTTTCCTCATCTTATTGAGGGCTAGGATGTAGTAGAAAAATGGGCCCAG-GGCCTCCCTGAGTGAGCCTCTTC---------------CAGGTGAGGGTAACTGAGGGCTTCTCTTCCCCATCTCAGAGCCT-CCACATGGGGTCTCCTTTACTCCTTCATCCTGTCTATCAGCATGGGGTTGTGGGGTCCTTACCATGGCCAGTCATCTTATCCGTCGTGGAGATGCTTCAGGGAAAATGCAGGACCATGCCGCAGGGCAGA-CTGAGGTCAGCAGAGACGCATCTGACATCTGGCTGTG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47294701 767 + 51301725 CCCTGGGGTCTCCTACCGGACCAGGGCCTACCTGTGGGGCAAGGTCCCTCTCATGCTAGAACCTCCCATTCCCCTTGTCAAATCTCAATGAAGTGAACCATGGCCTTGGGCATGAGAGTCATGGCGTCTCCTCCTACTGGCCCCGGCCGTGCGGGTGGATAAGACCACGGTG-CCCAcaggacag--agacacacagggccTGGGCACATAGAAGCAATGTTCTCCCACTTACTGGATTTTCCCACCAGCAT-----CTCC-ACGGGTGGTGAACTGTCCC----GGACCCCGCCACGAGCCCGGCTCTTGTTTTCCCAGGGCTTGGACTTTCTTGAAGGCTTtatctgcctctattgagatgatcatatggttttcgTTCTTAGTTTATGTCGTGAGTCACGTATCTTGAACCATCCTTTGAGACAGGCACCGGGCTTTCTGCTGATATTTCAGACACACAAGGCATCTCTCCTGATCTCCTT---TCGCTGTCTGCCCGACCGGTCCTCATCTCACTGAGGGCCAGGATGTAGCTG-CAAATGGACGTGG-TGCCTTCCTGAGTTGGTCCCTTC---------------GAGGTGAAGGCAACAGAGGGTTCTTCCTTCC--TCTCAGAGCCT-CTCCGTGGGGTCCCGCTCTCTCCTTCGGCTCACCCGTAAACACACCCTTGTGGGGAACCTACCACGGCCAGTCTTCTCACCAGTGCTGGGGAAGCTTCAGGGAAGATGCAAATTCAGGCTGCAGGGCAGA-CTCAGATCAGCAGAGACTCCTCTCACGTCTGGCTGTG i papAnu2.chr19 T 14809 C 0 s chlSab2.chr6 47017364 670 + 50890351 CCCTGGAGCTTCCTGATAGACAAGGCCCTGGTTATGGAGTGGGGTCCCTCCCAGACTAGGGTGCCCC-TTCCCTGCTTCCAATCTCACCGAGGCAGAGCAGAGCCACGAGGGCAGGGGTCACAGCGTCTCCTCCCACTGGCTGCAGCTGTGCAGATGGATGAACCCTCGGTG-CTGGCAGGACAGACACACACACAGGGTGTGGCTGCTCGGAGGCTGGGTCCTTCTTGTCATGGGATTGTCTCATCCTCAG-----CCCA-CAGGAAGGGGAACTGCCC--------TCCCCCCGGGAGCCTGGCTCTCATTTCCCCAGGGC---------------------------------TGAGGTG----------------------------------------------------------GGGGCGGGCACCAGGCTCTCTGCAGACATTTCAGAGAGAAATGGGGTCTCCCCG----TCCCTGGGCCACTGTCTGCCTGATTTATCTTTATCTCACTGAGGGCCGGGACACAGCAG-CAAATAGACCCAG-TGACTTCCTCAGTCAGCCCCTTT---------------CAGGCGAGGACGACCATGGGCTCCTCTTCCC--TCTCAGAGCCT-CCCCATGGGGTCTCCCTCCCTCTTTCAGCCCGTCCATCGGCTCAGCGTCGCGGGGTCCTTACCATGG-CAGTCGTCTCTCCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGCTGCA-GGCAGA-CCCAGGTCAGCAGAAACGCACCTGACACCGGGCTGTG i chlSab2.chr6 I 1 I 40010 s calJac3.chr22 45532466 689 + 49145316 CCCTGGGGTCTCCTACTGGACCAGGGCCTACCTGCAGGGCAGAGTCCCTCTCATGTTAGAATCTCCCGTTCCCCTCGTCAGATCTCAGTGAAGTGGGCCATGGACATGGGTGTGAGAGTCATGGTGTCTCCTGCTACTGGCCCTGGATGTGCAGATGGAGGAGACCATGGTGTCCG------CAGA---ACACACAGGGTGTGGGCACACAGAGGCCATGTTCCCCTGCTTACAGGATTTTCCCATCAGCAT-----CTCC-ATGGGTAGCGAACCGTCCCCCCGACAACCACAAGCAAGCCTGGCTCTTGTTTTCCCAGGGC---------------------------------TTGGGCT----------------------------------------------------------GAGACAGGCACCAGGTTTTCTGCTGATATTTCAGACGACCATGGGATCTCCCCG----ATCTCCTTTCACTGTCTGCCGGACCTGTCCTCATCTCATTTATGGCCAGTAGGTAGCCG-CAAATGGACGTGGTTGCCTTCCTGAGTCGGTCCCTTCCAGAGTCGGTCCCTTCAGGTGAAGGCAATGGAGGACTCTTCCTTCC--TCTCAGCGCCT-TCCCGTGGGGTCTCACTTTCTCCTTCAGCTCATCCATAAGCATATCCTTGTGGGGTTCCTGCCACAGCCAGTCCTCTCAGCAGCCCTGGGGGGGCTTCAGGGAAGATGCAAATTCAGGCTGCAGGGCAGA-CTCAGATCAGCAGAGACTCACCTCACATCTGTCTGTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19746157 541 - 122678785 GCCTGAGATCT-TTGGCAGACCAGGACCTGGCTGTGGGAT-GGGTCCCTCCCAGACTAGGGTGTCCC-CTCCCCTCCTCAGATCTCACTTAAACAGAGCAGGGCCATGAGGGTGGGGGTCATGGTGTCTCCTGTCTTTGGCCCTGGCCCTGCAGAT-GATAGGACCATGAGG-CCCAGAGGATAGGCAGACGCACAAGGTGTGGGTACTTGGAGGCCA-GTCTTACCCATAATGGGGTTGTCACATTAGCAGGATGTGACTACAGGAAGGGGAAC------------------------ACCCGG--------TCCCCAGGTC---------------------------------------------------------------------------------------------------------------------------------------------------CCCTA----GC---------CTGGCT---------------------CTGAGGTCTATGATGGTGCAG-CCAGTGATTCCTG-AGACTTTCTCAGAT-GTCCTGTC---------------CAGGTGAGGAGACC--AGGGCATGTACTTCCC-TCCCAGAGCCTCCCCCATGGGGT---------TCTTTAACCTT-------AGCACATCCCTG--GGGTTCTGATCATGG---ATGGGGTCCCCAGGCCCAGAAATGCTTAAGGGGACATG--GGTTCCTGCTGTGCTGTGGAGCTCATGTCAGCACAGATAGACGTACAATATCTCTGCT i canFam3.chr1 C 0 C 0 e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=146337.000000 s hg38.chr19_GL949747v2_alt 280723 171 + 729520 TAGTTCAAGTTGAGCTGCACTGTGGCAATGAGCGCAATGGAGAAACACAGGAA-ATATGGGTAGAGAACACGACCTGTATCC---AAC-----ACTGCCAGTTTGCTCTAT--CAACCCGTGCCCTCCATGGACTTTCCCTTT-CTCTTAGCAGCAG-TATCCA--CCTTCGTCTCCTTGGAAACA s panTro4.chr19 59235080 171 + 63644993 TAGTTCAAGTTGAGCTGCACTGTGGCAATGAGCGCAATGGAGAAACACAGGAA-ATATGGGTAGAGAACACGACCTGTATCC---AAC-----ACTGCCAGTTTGCTCTAT--CAACCCGTGCCCTCCATGGACTTTCCCTTT-GTCTTAGCAGCAG-CATCCA--CCTTCGTCTCCTTGGAAACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56064160 171 + 60714840 TAGTTCAAGTGGAGCTGCATTGTGGCAATGAGCGCAATGGAGAAACACAGGAA-ATATGGGTAGAGGACATGACCTGTATCC---AAC-----ACTGCCAGTTTGCTCTAT--CAACCGGTGCCCTCCATGGACTTTCCCTTT-CTCTTAGCAGCAG-CATCCA--CCTTCGTCTCCTTGGAAACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102846113 171 - 106955855 TAGTTCAAGTTGAGCTGCATTGTGGCAATGAGCGCAATGGAGAAACACAGGAA-ATATGGGTAGAGGACATGACCTGTATCC---AAC-----GCTGCCAGTTTGCTCTAT--CAACCAGTGCCCTCCATGGACTTTCCCTTT-CTCTGAGCAGCAG-CATCCA--CCTTTGTCTCCTTGGAAACA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47295468 184 + 51301725 CAGTTCCAGTTGAGTTTCACTGTGGCAATGAGCAGAAAGCGGAAATACAGGGACGCAAGGGAAAGAATCGTGACCCTTTTCCCAGAAC--TGGAGTGTGAGTTTTCTTTATGCAAAAAAGTTCCCTTCACGAACTTCTCATTTACTCATCGCAACGGTCACCCAcccccccGTCTCCCTGGAAACA i papAnu2.chr19 C 0 T 56508 s calJac3.chr22 45533155 176 + 49145316 CAGTTTCATTTGTGCTTCATTGCTGCAATGAGCA-AAAGAGGAAATATAGGGA-A-ATAGGGAAGAATCATGACTCTTTTCCCAGAAC--TGGAATGTGGGTTTTCTTTATGCAAAAATGTTCCCTTCACGAACTTCTCCTTA-GTCGTCACCACAG-CCTCCA--CCTCCATCTCCCTGGAAAC- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19746698 168 - 122678785 CACCTCAGATCTAGGT-CACCACGACAATGAACCCAA---AGAAATGTAGGCA-AATAGGGAAAGAAACACAGCCCCTCTCCT--GACCCCAGAGCCTGGGCTTTCTTTCT--AACACAG---CCTCCATGGACTTCTCTTTT-TTCCT-GTGCCAT-TGTCCA--TATCC-CCTTTATGGGAACA i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47018034 40010 + 50890351 I e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=18943.000000 s hg38.chr19_GL949747v2_alt 280894 84 + 729520 GACTTGTGATCCACTCCTGAGTCTTCAGTGTCCTT--------------------------------TGTTTCCCTG----------AGGGGAA-----CTCACCTGT--------------------------------------------------------------TGGGATGGGGAGCTGATTTTTAC- s panTro4.chr19 59235251 84 + 63644993 GACTGGTGATCCACTCCTGAGTCTTCAGTGTCCTT--------------------------------TGTTTCCCTG----------AGGGGAA-----CTCACCTGT--------------------------------------------------------------TGGGATGGGGAGCTGATTTTTAC- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56064331 84 + 60714840 GACTTGTGATCCACTCCTGAGTCTTCAGTGTCCTT--------------------------------TGTTTCCCTG----------AGGGGAA-----CTCACCTGT--------------------------------------------------------------TGGGTTGGGGAGCTCATTTTTAC- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102846284 84 - 106955855 GACTTGTGACCCACTCCTGGGTCTTCAGTGTCCTT--------------------------------TGTTTCCcgg----------agaggaa-----ctcacccat--------------------------------------------------------------tgggatggggagctgatttttac- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47239144 156 + 51301725 AACCTCTGAGTCATTCCTGCCTCCTCGGtgtccct-----------------cccaccccca-accccgcTTCCTTG-------------GGCA-----TTCCCCTGCATCTCAGT-CTGCCTTCAAGGGTTTGGAAACAAGTACTTAGTCTTGAGTTCTGATTTCGGGGTGGGATAGGGAGTTAATTTTTTC- i papAnu2.chr19 T 56508 T 36770 s calJac3.chr22 45533331 135 + 49145316 ----TTTGACCTGATTCTGCCTTCTTGGTGCCCCCGTTTACTTTCAAACACTCCTATTCTCATATTTTGCTCCTGTGTTCTGGTTTTGGGACAA-----TACATGGGTTTAGCACT-CTGAT------------------------------------------------TTGAAGGGAAGTCTCATCTTCAT- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19746866 148 - 122678785 CAGCCTTGAGTCCCTCCCAGCACATCATTGCCCCT--------------------------------TGTTCCTGGG--------GCAGAGCCATCCTCTCCATCCATCCTGGGGTCCTGTCTGTAAGCTGTATGGAGCACATATTTGGTTTAGAGCTCTGATT------TTGAAGAAAAACTTATCCTTTATC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47018034 40010 + 50890351 I e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=47985.000000 s hg38.chr19_GL949747v2_alt 280978 66 + 729520 TTAATGATTgctcat----tatctgct---gcccatgtgaccttgagccttcacaaccccttctctgagcctc s panTro4.chr19 59235335 66 + 63644993 TTAATGATTGCTCAT----TATCTGCT---GCccatgtgaccttgagccttcacacccccttctctgagcctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56064415 66 + 60714840 TTAATGATTgctcat----tatctgct---gcccatgtgaccttgagccttcacacccccttctctgagcctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102846368 66 - 106955855 ttaatgattgctcat----tatctgct---gcccatgtgagcttgagccttcacacccccttctctgagcctc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47202530 65 + 51301725 ttattaattcctgat----tatCGTCCAGGGtttatgtgaccttggacattAATGTTAC---CTCTGAGCCT- i papAnu2.chr19 T 36770 C 0 s calJac3.chr22 45533466 65 + 49145316 ---TTAAATATTCATGTCAcacctcct---gcccgtgtgaccgtg-gccgtaac-ctttcatttctgagcctg i calJac3.chr22 C 0 C 0 s canFam3.chr1 19747014 66 - 122678785 TAAATATTCATCTAT----TATCCATT--TGTCTATGTGACCCAGGGTGATAATATCCT-GTCTACAAGTCTT i canFam3.chr1 C 0 T 27468 e chlSab2.chr6 47018034 40010 + 50890351 I e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=168026.000000 s hg38.chr19_GL949747v2_alt 281044 230 + 729520 agtttccttgtgtgGAGCAAGTTGTTACACACCCCACTCATCAGAGGGGTCGTGGGGGTCGGCGGTGACTGGGACTTCGAAGGAGCTCAATGATGGTTAATTCCCAGGACAGAGTAAGACA--T--AGGGT--------------------------------------------TGTAAATTTGAGAAAATCAGGGTGTT------------------GGACAATTGACGCTCCCACCCAAGAATCCTCATCTACCCTGAGCACTAAGAAATTGTACATATAATATTGCTTAAAT s panTro4.chr19 59235401 229 + 63644993 agtttccttgtgtgGAGCAAGTTGTTACACACCCCACTCATCAGAGGGGTCGTGGGGGTCGGTGGTGACTGGGACTTCGAAGGAGCTCAATGATGGTTAATTCCCAGGACAGAGTAAGACA--T--AGGGT--------------------------------------------TGT-AATTTGAGAAAATCAGGGTGTT------------------GGACAATTGACGCTCCCAGTCAAGAATCCTCATCTACCCTGAGCACTAAGAAATTGTACATATAATATTGCTTAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56064481 229 + 60714840 agtttccttgtgtggagcaagttgttacacaccccactcatcagaggggtcgtgggggtcaGTGGTGACCGGGACTTCAAAGGAGCTCAGTGATGGTTAATTCCAAGGACAGAGTAAGACA--T--AGGGT--------------------------------------------TGT-AATTTGAGAAAATCAGGGTGTT------------------GGACAATTGACACTTCCACTCAAGGATCCTCATCTACCCTGAGCACTAAGAAATGGTACATATAATATTGCTTAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102846434 229 - 106955855 agtttccttgtgtgGAGCAAGTTGTTACACACCCCACTCATCAGAGGAGTCGTGGGGGTCGGTGGTGACCGGGACTTCAAAGGAGCTCAATGATGGTTAATTCCCAGGACAGAGTAAGACA--T--AGGGT--------------------------------------------TGT-AATTTGAGAAAATCAGGGTATC------------------GGACAATTGACGCTCCCACTCAAGGATCCTCATTTACCCTGAGCACTAAGAAATGGTACATATAATATTGCTTAAAT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47202595 268 + 51301725 --------------------GTTGTCATGAACCCCACTCATCACAGTggctgt-ggggtcagtggtgccCAGGACACGGGAG--GCTCAGCCGTGGTGAATTTCCAGACCAGTTCAGACCG--G--AGGGTGGGACGGGAGAGGATCCTGGTCCAGACCAGTTCAGACCGGAGGGTGG-GACGGGAGAGGATCCTGGTGTGGAGTTCCACAGTCCAGCAGGATGATTGACGCTCCCACTCAAGAGCCGACATCGGCTCCAAATACCAAGAAGTGCTGCTTGTGATACGTCTGAAAT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45533531 238 + 49145316 agtttcctcatttgAAGC---CTGTCATGAACTCCATTCATCACAGGGGAGCT--GGGTCATTGGTGTCTGGGAGCTGCATGGGGCTCAGCCATGGGTGATTTCCAGAGCAGGTGAAGACA--TGAGGGGC--------------------------------------------GGG-GACATGAAGGGATGCTGGAGTC------CATGCTCAAGGCCTGTGACTGATGTTTCCACTCAGGATCCCCTCTTCGTTCCTACCCTTGAGAGATGTTCCTTACCATATTTCATCAAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 102764651 213 + 122678785 AGTGATCTGGTCTGTAGTGTGCT-TTCTGTATCCCACTCCTCGGGGGGG-----GGGGTAGAACATGAGTGTAA------------TTAAGCATTGTTAGTCTCCTGACCTGATTAAGAGGGTT--GTGGT--------------------------------------------TGG-GACAAGAGAGGTCCCTGGGTCT------------------GATCCAGTGATGCACCCCCTTGAGAGACCCCATGTGCCCCTAAAGGTGAAAAATGCTATTTATACTATTTCTGAAAT i canFam3.chr1 T 10123 I 7246 e chlSab2.chr6 47018034 40010 + 50890351 I e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=23385.000000 s hg38.chr19_GL949747v2_alt 281274 25 + 729520 ACACAGATTATCACAGTCATGAGTA s panTro4.chr19 59235630 25 + 63644993 ACACAGATTATCACAGTCATGAGTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56064710 25 + 60714840 ACACAGATTATCACAGTCATGAGTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102846663 25 - 106955855 ACACAGATTATCACAGTCATGAGTA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47202863 25 + 51301725 ATGCAGATCACCACAGCcacaggca i papAnu2.chr19 C 0 N 0 s calJac3.chr22 45533769 25 + 49145316 ACCCCAGTTGTCATGGTCATGTGCA i calJac3.chr22 C 0 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e chlSab2.chr6 47018034 40010 + 50890351 I e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=3730.000000 s hg38.chr19_GL949747v2_alt 281299 4 + 729520 GAAA s panTro4.chr19 59235655 4 + 63644993 GAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56064735 4 + 60714840 GAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102846688 4 - 106955855 GAAA i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45533794 4 + 49145316 GAAA i calJac3.chr22 C 0 I 33934 e canFam3.chr1 102764864 7246 + 122678785 I e chlSab2.chr6 47018034 40010 + 50890351 I e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=77022.000000 s hg38.chr19_GL949747v2_alt 281303 243 + 729520 tccttccttccttcttcctt-cttccttccttccttccttccttccttccttccttccttccttccttccttccttcctccctccctccctccctccctcactcccccccC----------------------------------------------------------------ctttctttctttctttctttctttcttctttcCtttt--------------------------------ttttttttttttgacagagtctcactctgttgcccaggctggagtgcagtggcacaatcttggctcactgcaaccaccatctcctgggttcaagtg s panTro4.chr19 59235659 188 + 63644993 ---------------------------------------------------tccttccttctttccttccttccttccttcctccctccctccctccctCACTCCCCCCC---------------------------------------------------------------------ctttctttctttctttctttcttctttctttcc--------------------------------ttttttttttttgacagagtctcactctgttgcccaggctggagtgcagtggcacaatcttggctcactgcaaccaccatctcctgggttcaagtg i panTro4.chr19 C 0 I 735 s ponAbe2.chr19 56064739 190 + 60714840 ---------------------------------------------------tccttccttccttccttccttccttcctccctccctctctcccttctctccctccctcc---------------------------------------------------------------------ctctctctctTTCTTTCtttcttctttctttcc------------------------------ttttttttttttttgacagagtctcactctgttacccaggctggagtgcagtggcacaatcttggctcactgcaaccaccatctcctgggttcaagtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102846692 333 - 106955855 -------tccttttttccttcctccctccctccctccctcccttccttccttccttccttccttccttccttccttccttcctctctctctcttcttttcctttcctttcctttctttctcctttctttctttctttctttctttctttctttctttctttctttcttctttcttctttctttctttctttctttctttcttctttctttctctttcttttttctttctttcttctcttctttcctttttttttttgacagagtctcgctcggttgcccaggctggagtgcagtggcacaatcttggctcactgcaaccaccatctcctgggttcaagtg i nomLeu3.chr10 C 0 I 722 e canFam3.chr1 102764864 7246 + 122678785 I e calJac3.chr22 45533798 33934 + 49145316 I e chlSab2.chr6 47018034 40010 + 50890351 I e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=8622.000000 s hg38.chr19_GL949747v2_alt 281546 15 + 729520 attctcctgcctcag s panTro4.chr19 59236582 15 + 63644993 attctcctgcctcag i panTro4.chr19 I 735 C 0 s ponAbe2.chr19 56064929 15 + 60714840 attctcctgcctcag i ponAbe2.chr19 C 0 I 727 s nomLeu3.chr10 102847747 15 - 106955855 attctcctgcctcag i nomLeu3.chr10 I 722 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e calJac3.chr22 45533798 33934 + 49145316 I e chlSab2.chr6 47018034 40010 + 50890351 I e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=458459.000000 s hg38.chr19_GL949747v2_alt 281561 937 + 729520 cttcctgagtagctgggactacaggggcatgccaccgcacctggctaatttcttttgtattttagtagagatggggtttctccatgttgcccaggttggtcttgaactcctgagctcaggcaatccgcccgcctcgccctcccaaagtgctaggattacaggcgtgagcaaccacgcccagtcgaaggactagtttttaattccggttctggctgtctggttggttttggttttcctcatgtatgtttgctgagaggatctatgtagttgcctgtgatgcccgttaatccaaaattgccacctcactttcatcagtaggtggtatcttaggccATCGTTATATAAGAGTAACTTTTTTTTCACTTTTTGGAAAATATTTTATTTGCCAAAATACATTTGAGAAAAATAATGTTGATTATACAAGCGGATAAAGCAATTGTCatatatatatacacacatacacacacacatatatacatctatacatatacacatatatatacatatacacacatatatacgcatatatacat--atatacacacacatatatacatatatatatgtatacacgcacacacacaAAtatatatacactgtggaatactactcagccataagagggaacaaaataatggcattcatagtgacctggatgaaattggagactattattctaagtgaagaaattcaggaatgaaaaaccaaatattttatgttctcattcctaagtgggagctaagctatgaggatgcaaaggcataagaatgctacaatggactttggggactcgggggaaagggagggaggaggtgagggataaaagactataaatcgggtttaatgtatactactagggtgatgggtgcacaaaaatctcagaaatcatcactaaagaacttctgcaagtaaccaaacaccacgttccccaaaaaccta s panTro4.chr19 59236597 935 + 63644993 cttcctgagtagctgggactacaggggcatgcctccgcacccggctaatttcttttgtattttagtagagatggggtttcaccatgttgcccagtttggtcttgaactcctgagctcaggcaatccgcccgcctcgccctcccaaagtgctaggattacaggcgtgagcaaccgtgcccagtcgaaggactagtttttaattccggttctggctgtctggttggttttggttttcctcatgtatgtttgctgagaggatctatgtagttgcctgtgatgcccgttaatccaaaattgccacctcactttcatcagtaggtggtatcttaggccATCGTTATATAAGAGTAACTTTTTTTTCACTTTTTGGAAAATATTTTATTTGCCAAAATACATTTGAGAAAAATAATGTTGATTATACAAGTGGATAAAGCAATTGTcatatatatatacacacacacacacacacatata--catctatacatatacacatatatatacatatacacacatatatacacatatatacatgtatatacacacacatatatacatatatatatgtatgcac--acacacacatatacatatacactgtggaatactactcagccataagagggaacaaaataatggcattcacagtgacctggatgaaattggagactattattctaagtgaagaaattcaggaatgaaaaaccaaatgttttatgttctcattcctaagtgggagctaagctatgaggatgcaaaggcataagaatgctacaatggactttggggactcgggggaaagggagggaggaggtgagggataaaagactataaatcgggtttaatgtatactactagggtgatgggtgcacaaaaatctcagaaatcatcactaaagaatttctgaaagtaaccaaacaccacgttccccaaaaaccta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56065671 894 + 60714840 cctcctgagtagctgggactacaggggcatgccaccgcacctggctaatttcttttgtattttagtagagatggggtttcaccatgttgcccaggttggtcttgaactcctgagctcagacaatccgcccgactcgccctcccaaagtgctaggattacaggcgcgagcaaccgcgcccggtcgaaggactagtttttaattccagttctggctgtctggttggttctggttttcctcatgtatgtttgctgagaggatctatgtagttgcctgtgatgcccgttaatccaaaattgccacctcactttcatcagtaggtggtatcttaggccATCTTTATATAAGAGTAACTTTTTTTTCACTTTTTGGAAAATATTTTATTTACCAAAATACATTTGAGAAAAATAATGTTGATTATACAAGCGGATAAAGCAATTGTCatatatatatatatacacacacacacacatata------tatacatatatacatata------------------------catatatacat--atatataaatatatatatacatatttatacatatatac--acacacac-----------cactgtggaatactactcagccataagaaggaacaaaataatggcattcatagtgacctggatgaaattggagactattattctaagtgaagtaattcaggaatgaaaaaccaaatgttttatgttctcactcttaagtgggagctaagctatgaggatgcaaaagcataagaatgttacaatggactttggggactcgggggaaagggagggaggaggtgagggataaaagactataaattgggttcagtatgtactactagggtgatgggtgcaccaaaatctcagaaattatcactaaagaacttctgcaagtaacctaacaccatgttccccaaaaaccta i ponAbe2.chr19 I 727 C 0 s nomLeu3.chr10 102847762 877 - 106955855 cttcctgagtagctgggactactggtgcatgccactgcacccggctaatttcttttgtattttagtagagatggggtttcaccatgttgcccaggctggtcttgaactcctgagctcaggcaatccgcccgcctcgccctcccaaagtgctaggattacaggcgtgagcaaccgcgcccagtcaaaggactagtttttaattccagttctggctgtctggttggttttggttttcctcatgtatgtttgctgagaggatctatgtagttgcctgtgatgcccattaatccaaaattgccacctcgctttcatcagtaggtggtatcttaggccATCGTTATATAAGAGTAACTTTTTTTTCACTTTTTGGAAAATATTTTATTTACCAAAATACATTTGAGAAAAATAATGTTGATTATACAAGCAGATAAAGCAATTGTcatatatatatatatacacacacacacatatata------tatacatatatacatata------------------------cacatatatat--------------------acacatatataaataCACAC--ACacacac----------acactgtggaatactactcagccataagaaggaacaaaataatggcattcacagtgacctggatgaaattggagactattattctaagtgaagtaattcaggaatgaaaaaccaaatattttatgttctcactcttgagtgggagctaagctatgaggatgcgaaagcataagaatgttacaatggactttggggactcgggggaaagggagggaggaggtgagggataaaagactataaattgggttcagtgtgtactactagggtgatgggtgcacgaaaatctcagaaatcatcactaaagaacttctgcaagtaatcaatcaccatattccccaaaaaccta i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e calJac3.chr22 45533798 33934 + 49145316 I e chlSab2.chr6 47018034 40010 + 50890351 I e macFas5.chr19 55202559 54552 + 59248254 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=153793.000000 s hg38.chr19_GL949747v2_alt 282498 147 + 729520 tggaaataagaaaG---------AAAATAA----AAGAAAAATGATGTTGGTTATAAGTTGTGCAAACCTGTGTCTTAACTTGTTCAttccaccagcat--aaaatgcagcaacacatgtgcagtgttggccccaggcaaatctgcttgagactcaatgttc s panTro4.chr19 59237532 147 + 63644993 tggaaataagaaaG---------AAAATAA----AAGAAAAATGATGTTGGTTATAAGTTGTGCAAACCTGTGTCTTAACTTGTTCAttccaccagcat--aaaatgcagcaacacatgtgcagtgttggccccaggcaaatctgcttgagactcaatgttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56066565 146 + 60714840 tggaaataagaaaG---------AAAATAA----AAGAAAAATGATGTTGGTTATAAGTTGTGCAAACCTGTGTCTTAACTTGttcattccaccagcat---aaatgcagcaacacatgtgtagtgttggccccaggcaaatctgcttgagactcaatgttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102848639 146 - 106955855 tggaaataag-aag---------aAAATAA----AAGAAAAATGATGTTGGTTATAAGTTGTGCAAACCCGTGTCTTAACTTGTTCAttccaccagcat--aaaatgcagcaacacatgtgtagtgttggccccaggcaaatctgcttgagactcaatgttc i nomLeu3.chr10 C 0 I 312 s macFas5.chr19 55257111 162 + 59248254 tgaaaaaAAAAAAAAACTTTACCAAAATAAATTTAAGATCAAGAATGCTAGTCGTAAGCTGTGAAAATCTGTGTCTTGTCTTAATCATTCCATCAGCATAAaaaatgtagcaacacatgtgaagtgttggttccaggcaaaccggcttaagactcaatgttc i macFas5.chr19 I 54552 C 0 s papAnu2.chr19 47348260 160 + 51301725 tggaaaaaaaaaaaaactttaccaaaataaatttaagatcAAGAATGCTAGTCGTAAACTGTGAAAATCTGTGTCTTGTCTTAATCATTCCATCAGCATAAAAAATGTAGCAACAC--GTGAAGTGTTGGTTCCAGGCAAACCCGCTTAAGACTCAATGTTC i papAnu2.chr19 N 0 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e calJac3.chr22 45533798 33934 + 49145316 I e chlSab2.chr6 47018034 40010 + 50890351 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=466464.000000 s hg38.chr19_GL949747v2_alt 282645 467 + 729520 aagattgttattaggtgggg-accacataggcataatgagcagctacagagaaaccagaggaaaccgggtgttcgcca----------------------------------------tgaattacactgtttacagaaacagcctagtgaagacataacagcagaattcagtgccgcaggcacacaacctcacgttgtctcttagtaacacaggggacatgctagaa-gcaagttc-----ctagatgccaaccaagaatcaagctcacaaacaagtccttctaaagttagcatcctcatcactgttaggttaacttcttcttgcataTCCTTCACCTAAAAGAAATAGTAGTCATCTTCAATCCTTCAGCACAGCGTTCACACAGCACGTGCCTCCAGCTCTCCCAGATTCTTCTAGGGCCAGCACAGCTTTTCTGATGCAGATTTTTCAAAGTTCTCCAAACTG--AAGAGTCAATCCAAAATCATCTTGACTTTCCATGTTGGCGGCCTTTG s panTro4.chr19 59237679 467 + 63644993 aagattgttattaggtgggg-accacataggcataatgagcagctacagagaaaccagaggaaaccgggtgttcacca----------------------------------------cgaattacactgtttacagaaacagcctagtgaagacataacagcagaattcagtgctgcaggcacacaacctcacgttgtctcttagtaacacaggggacatgctagaa-gcaagttc-----ctagatgccaaccaagaaccaagctcacaagcaagttcttctaaagttagcatcctcatcaatgttaggttaacttcttcttgcataCCCTTCACCTAAAAGAAATAGTAGTCATCTTCAATCCTTCAGCACAGCGTTCACACAGAACGTGCCTCCAGCTCTCCCAGATTCTTCTAGGGCCAGCACAGCTTTTCTGATGAAGATGTTTCAAAGTTCTCCAAACTG--AAGAGTCAATCCAAAATCATCTTGACTTTCCATGTTGGCGGCCTTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56066711 465 + 60714840 aagattgttattagatgggg-accacataggcataatgagcagctacagagaaaccagaggaaaccgggtgttcacca----------------------------------------tgaattacactgtttacagaaacagcctagtgaagacgtaacagcagaattcagt---gcaggcacacaacctcacgttgtctcttagtaacacaggggatatgctagaaggcaagttc-----ctagatgccaaccaagaaccaagctcacaagcaagtccttctaaagtgagcatcctcatcgctgttaggttaacttcttcttgcataCACTGCACCTAAAAGAAATAGTAGTCATCTTCAATCCTTCAGCACAGCGTTCACACAGAACATGCCTCCAGCTCTCCCAGATTCTTCTAGGGCCAGCACAGCTTTTCTGATGAAGATTTTTCAAAGTTCTTCAAACTG--AAGAGTAAATCCAAAACCATCTTGACTTGCCATGTTGGCAGCCTTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102849097 468 - 106955855 aagattgttattaggtgggg-accacataggcataatgagcagctacagagaaaccagaggaaactgggtgttcacca----------------------------------------cgaattacactgtttacagaaacagcctagtgaagacataacagcagaattcagtgctgcaggcacacaacctcacattgtctcttagtaacacagggaacatgctagaaggcaagttc-----ctagatgccaaccaagaaccaagctcacaagcgagtccttctaaagttagcatcctcatcgctgttaggttagcttcttcttgcataCCCTGCACCTAAAAGAAATAGTAGTCACCTTCAGTCCTTCGGCATAGCGTTCACACAGAACGTGCCTCCAGTTCTCCCAGATTCTTCTAGGGCCAGCACAGCTTTTCCGATGCAGATTTTTCAAAGTTCTCCAAACTG--AAGAGTCAATCCAAAATCATCTTGTCTTTCCATGTTGGCAGCCTTTG i nomLeu3.chr10 I 312 C 0 s macFas5.chr19 55257273 508 + 59248254 aaggttgttattaggtgggg-accacataggcataaGGGTCAGTCACAGGGAAACCAGGGAAAAGCTGGTGTTCACCAGCtttttttttttttttttt---AACTAGCTCATCAACAGTGAGCTACACTATTTGCAGAAACAGCCTAGTCAAGAC---ACAGCAGAATTCAATGCTGCAGTCACACAACCCCAGTttatctcttaggaacgtagggaacattccaggagccatgtttaggaactagacgccagctcaggaccacctttacaagcaaaccctcccaacgttatcccccttgcaactgtgagattaactccttcttgcacaACCTGCACCTGAAAAAAATAACAGTCCTCTTGAATGCAGCAGCACGCTGTTCACCCAGAACATGCCTCCAGCTCCTCCAGATTCTTCTGGCCCTATCTCAG-TTTTTTTCTGCAGATTCTCCAAGGTTCTGCAAACTGTAAGTAGTAAATCCATACTCATCTTGAGTTTTCATGAGGGAAGCCATCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47348420 513 + 51301725 AAGGTTGTTATTAGGTGGGGCACCACGTAGGCATAAGGGTCAGTCACAGGGAAACCAGGGAAAAGCTGGTGtttgccagcttttttttttttttttttttaaactagcttATCAACAGTGAGCTACACTGTTTGCAGAAACAGCCTAGTCAAGAC---ACAGCAGAATTCAGTGCTGCAGTCACACAACCCCAGTTTATCTCTTAGGAACATAGGGAACATTCCAGGAGCCATGTTTAGGAACTAGATGCCAGCTCAGGACCACCTTTACAAGCAAACCCTCCCAACGTTATCCCCCTTGCAGCTGTGAGATTAACTCCTTCTTGCACAACCTGCACCTGaaaaaaaTAACAGTCGTCTTGAATGCAGCAGCACGCTGTTCACCCAGAACATGCCTCCAGCTCCTCCAGACTCTTCCGGCCctatctcagttttttttttgccGATTCTCCAAGGTTCTGCAAACTGTAAGTAGTAAATCCATACTCATCTTGAGTTTTCATGAGGGAAGTCATCT i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e calJac3.chr22 45533798 33934 + 49145316 I e chlSab2.chr6 47018034 40010 + 50890351 I e rheMac3.chr19 60067985 90710 + 64156825 I a score=570263.000000 s hg38.chr19_GL949747v2_alt 283112 268 + 729520 GGGGCCTTCTCTGGCTGTGCTGAGCCTGAAAGATCATCCCCTAGAGACCGCCAGGATCAAGCCAGCATGGTCATTGGAATGAGATTCTCCATTGCATAGTCTGAAGGGGCATGGTCAGTAGACAGAACAGGGCATTCACTGGGGGC-TAGACAGGCTGCACCCACATTGGGAG-CCTGGATGGGTGTTTACACATTCACACTCCTGAAAGAGAAGTCGT---AGTTACTCCTGACTTTGAAACTATACTTGGTGGATGCTGGTTGAGAGGATC s panTro4.chr19 59238146 268 + 63644993 GGGGCCTTCTCTGGCTGTGCTGAGCCTGAAAGATCATCCCCTAGAGACCGCCAGGATCAAGCCAGCATGGTCATTGGAATGAGATTCTCCATTGCATAGTCTGAAGGGGCATGGTCAGTAGACAGAACAGGGCATTCACTGGGGGC-CAGACAGGCTGCACTCACATTGGGAG-CCTGGATGGGTGTTTACACATTCACACTCCTGAAAGGGAAGTCGT---AGTTACTCCTGACTTTGAAACTATACTTGGTGGATGCTGGTTGAGAGGATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56067176 271 + 60714840 GGGGCCTTCTCTGGCTGTGCTGAGCCTGAAAGATCATCCCCTGGAGACTACCAGGATCAAGCCAGCATGGTGGTTGGAATGAGATTCTCCATTGCATAGTCTGAAGGGGCATGGTCAGTAGACAGAACAGGGCGTTCACGGGGGGC-CAGACAGGCTGCACTCACGTTGGGAG-CCTGGATGGGTGTTTACACCTTGACACTCCTGAAAGGGAAGTCCTGAAAGGGAAGCCTGACTCTGAAACTATACTTGGTGGATGCTGGTTGAGAGGATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102849565 268 - 106955855 GGGGCCTTCTCTGGCTGTGCTGAGCCTGAAAGATTATCCCCTAGAGACCAGCAGGATCAAGCCAGCATGGTCATTGGAATGAGATTCTCCATTGCACAGTCTGGAGGGGCATGGTCGGTAGACAGAACAGGGCTTTCACTGGGGAC-CAGACAGGCTGCACTCACATTGGGAG-CCTGGATGGGTGTTTACACATTCACACTCCTGAAAGGAAAGTCAT---AGTTACTCCTGACTCTGAAACTATACTTGGTGGATGCTGGTTGAGAGGATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60158695 270 + 64156825 GGGGCCTTCTCTGGCTGTACTGAGCCTGAAGGAGCATCCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGTCTAGAGGGGCGTGGTCAGTAGACAGAATGGAGCACTTGGTGAGGGCTTAGACAGATCACACTTACCTTGGAAGCCCTGGATGGGTGTTTACACATCTACACTCTGGAAAGGGGAGTTCC---AGTTATTCCTCACTGTGGGTCTATACTTGGTGGAGGATGGTTGAGAGGATC i rheMac3.chr19 I 90710 T 71803 s macFas5.chr19 55257781 270 + 59248254 GGGGCCTTCCCTGGCTGTACTGAGCCTGAAGGAGCATCCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGTCTAGAGGGGCGTGGTCAGTAGACAGAATGGAGCATTTGGTGAGGGCTTAGACAGATCACACTTACCTTGGAAGCCCTGGATGGGTGTTTACACATCTACACTCTGGAAAGGGGAGTTCC---AGTTATTCCTCACTGTGGGTCTATACTTGGTGGAGGATGGTTGAGAGGATC i macFas5.chr19 C 0 T 53931 s papAnu2.chr19 47348933 270 + 51301725 GGGGCCTTCTCTGGCTGTACTGAGCCTGAAGGAGCATCCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGTCTAGAGGGGCATGGTCAGTAGACAGAATGGAGCATTTGGTGAGGGCTTAGACAGATCACACTCACCTTGGAAGCCCTGGATGGGTGTTTACACATCTACACTCTGGAAAGGGGAGTTCT---AGTTATTCCTCACTGTGGGTCTATACTTGGTGGAGGATGGTTGAGAGGATC i papAnu2.chr19 C 0 T 37983 s chlSab2.chr6 47058044 270 + 50890351 GGGGCCTTCTCTGGCTGTACTGAGCCTGAAGGAGCATCCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGTCTAGAGGGGCGTGGTCAGTAGACAGAATAGAATATTTGCTGAGGACTTAGACAGGCCACACTCACCTTGGAAGCCCTGGATGGGTGTTTACACATCTACACTCTAGAAAGGGGAGTTCC---AGTTATTCCTCACTGTGGGTCTATACTTGGTGGAGGATGGTTGAGAGGATC i chlSab2.chr6 I 40010 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e calJac3.chr22 45533798 33934 + 49145316 I a score=1820.000000 s hg38.chr19_GL949747v2_alt 283380 2 + 729520 AA s panTro4.chr19 59238414 2 + 63644993 AA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56067447 2 + 60714840 AA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102849833 2 - 106955855 AA i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47058314 2 + 50890351 AA i chlSab2.chr6 C 0 T 57092 e canFam3.chr1 102764864 7246 + 122678785 I e calJac3.chr22 45533798 33934 + 49145316 I e papAnu2.chr19 47349203 37983 + 51301725 T e macFas5.chr19 55258051 53931 + 59248254 T e rheMac3.chr19 60158965 71803 + 64156825 T a score=56677.000000 s hg38.chr19_GL949747v2_alt 283382 111 + 729520 GGACTCCTACGAATAAGAGCATGGGAGGATTAGAGCAGCTGGGGCCATTCTACTCCTGCTCCCCTGTCTTGGCTCCTTCATAACAACTCTCTTCCCTCttttttttttttt s panTro4.chr19 59238416 109 + 63644993 GGACTCCTACGAATAAGAGCATGGGAGGATTAGAGCAGCTGGGGCCATTCTACTCCTGCTCCCCTGTCTTGGCTCCTTCATAACAACTCTCTTCC--Cttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56067449 109 + 60714840 GGACTCCTAGGAATAAGAGCATGGAAGGATTAGAGCAGCCGGGGCCATTCTACTCCTGCTCGCATGTCTTGGTTCCTTCATAACAACTCTCTTCC--Cttctttttttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102849835 109 - 106955855 GGACTCCTAGGAATAAGAGCATGGGAGGATTAGAGCAGCTGGGGCCATTCTACTCCTGCTCCCATGTCTTGGTTCCTTCATAACAACTCTCTTCC--Cttctttttttttt i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e calJac3.chr22 45533798 33934 + 49145316 I e chlSab2.chr6 47058316 57092 + 50890351 T e papAnu2.chr19 47349203 37983 + 51301725 T e macFas5.chr19 55258051 53931 + 59248254 T e rheMac3.chr19 60158965 71803 + 64156825 T a score=5821.000000 s hg38.chr19_GL949747v2_alt 283493 17 + 729520 tttttttttttttttga s panTro4.chr19 59238525 17 + 63644993 ttttttttgttttttga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56067558 8 + 60714840 ---------ttttttga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102849944 9 - 106955855 t--------tttttcga i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47311220 17 + 51301725 ttcttcttcttttttga i papAnu2.chr19 T 37983 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e calJac3.chr22 45533798 33934 + 49145316 I e chlSab2.chr6 47058316 57092 + 50890351 T e macFas5.chr19 55258051 53931 + 59248254 T e rheMac3.chr19 60158965 71803 + 64156825 T a score=86629.000000 s hg38.chr19_GL949747v2_alt 283510 68 + 729520 gatggagtcttgctccattgcccaggctggagtgcagtggtgcaatctcagctcactgcaacatctgc s panTro4.chr19 59238542 68 + 63644993 gatggagtcttgctccattgcccaggctggagtgcagtggtgcaatctaagctcactgcagcatctgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56067566 68 + 60714840 gatggagtcttgctccattgcccaggctggagtgcagtggcgcaatctcggctcactgcaacttctgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102849953 68 - 106955855 gatggagtcttgctccattgcccaggctggagtgcagtggtgccatctcagctcactgcaacctctgc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47311237 68 + 51301725 gatggagtcttgctctgtcgcccaggctggagtgcagtggcacaatcttggctcactgcaacctctgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47001224 68 + 50890351 gatggagtcttgctctgtcgcccaggctggagtgcagtggcacaatctcagctcactgcaacctctgc i chlSab2.chr6 T 57092 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e calJac3.chr22 45533798 33934 + 49145316 I e macFas5.chr19 55258051 53931 + 59248254 T e rheMac3.chr19 60158965 71803 + 64156825 T a score=3103858.000000 s hg38.chr19_GL949747v2_alt 283578 1810 + 729520 ctcccaggttcaagcaattcttctgtctcagcctccagagtagttgggactacaggggcctgccaccatgcctggctaatttttgtatttttagtagagacagtgtttcaccttgttggtcaagctggtctcgaactcctgacctcagatgatccacctgccttggactcccaaagtgctggggccaccgcgcctggACCTCTCTTCCCTTCTCATGGGAGAATTGTGTAACCATCCTTGCTAACCTCAACTCCCACCTCAGATGGAGCACTGTATGATTTCCTTCCTCAAATTTGTTCAAGTTCTTGGGCCTCATTGAGGTCACCACCAACCTCTCGG-TTTGGGGGATATTAAGAGTTTAGTTTTGC-AACCACAACTCAGTGACAG-AAAAAAGGAATTCAAAGATACAGGAATA-------------------------------CTTAACTGTGCTCCTTTCTCATCTTCAATTTGTTCCCATATTAGGTAAACCCGTGCTTAACCCCTTAAGGTAAATACCTCTAGTAACTCTTCATCTGTCAATACAGAATTCAGAGATGCGTATGTGGGACTCTAGATTGTACCAGAGTCCAGGGTACAACAGAGCTAAAGGCTGTCACTGCCTTTTCTATTGTTCTGCCTCATCTAATTATCTCTGTGGTCCAGTGTAGCTTAA---TACTACTACTATTAAAAGTAATAATCACTGCCTCACTTTTAATGATTGGGTCCACTCATCTGTCCTGTTTTGCGATGAATGAGAGAATGATTTTAGAATCCAAGCCttttt-----------tttttttttgagacagagttttgctcttgttgtccaggctggagtgcaatggtgcaatctcggctcaccgcaacctctgcctcc--gattcaagcgattctcctccctcagcctcctgagtagctgggattacaggcatgcacaactacacctggctaatactgtatttttagtagagacagtgtttctctatgttggtcaggctggtctcgaactcttgacctcaggtgatccacccacctcggcctcccaaagtgctaggattacaggtgtgagccaccatgccgggccGCATCCAAGCCTCTTTTCCAGGAGCAAGAAATACTACAGTGAAAAAAATCTCCCATTGTTAATTCAATGTAGAAACTCATGAGAAAAAAGCAAAAAATTTT-AAGGAGATAAATTAG---------AAAACAACATGTGCAGATGGATACATGGACAAAAAAATTAAGCTACCTAGAGATCTCGAATGTGTGTCAACCTAATACAAGGACTATTAGAGAATACAGGTGGGCAAGAATCACTTAACCCACTTTGTCATGGAAAATGTCTTTGAGGATGTGACAGGTTTGG-AAAAATGAAAAAATGACAAAGTGGTCATTATATGAAGATCCAGAAAAATAATATTATTCAATATAGGATCAGCTGATTGAAGTAT----TCAACAAATATGCAGAAAGTTTCCTAGTGTGGACAAGACTTATTTGATTATGAGGAAATTTAATAAGTGCTGTGAAGTAACATAGATCTGTATTCACAGATGTGCAATAAA---TTAAGTAAAAATCAATAAAGACATAAAATGAGAAAAAAACCTATCTACAATAAAACCATCAATCTCAAATCATTGGATGGAGAGAAATATACATATACAGAATACTCTCTGAGAATAACTAGAATAAGGAGATATGTggccgggtgcagtggctcacacctgtaatcccagcactttgggaggtcgaggtgggtggatcacttgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccccgtctctact-aaaaatacaaaattagccggaaatggtgg s panTro4.chr19 59238610 1810 + 63644993 ctcccaggttcaagcaattcttctgtctcagcctccagagtagttgggactacaggggcctgccaccacgcctggctaatttttgtatttttagtagagagagtgtttcaccttgttggtcaagctggtctcgaactcctgacctcagatgatccacctgccttggactcccaaagtgctggggccaccgcgcccggACCTCTCTTCCCTTCTCATGGGAGAATTGTGTAACCATCCTTGCTAACCTCAACTTCCACCTCAGATGGAGCACTGTATGATTTCCTTCCTCAAATTTGTTCAAGTTCTTGGGCCTCATTGAGATCACCACCAACTTCTCGG-TTTGGGGGATATTAAGAGTTTAGTTTTGCAAACCACAACTCAGTGACAG-AAAAAAGGAATTCAAAGATACAGGAATA-------------------------------CTTAACTGTGCTCCTTTCTCATCTTCGATTTGTTCCCATATTAGCTAAACCCATGCTTAACCCCTTAAGGTAAATACCTCTAGTAACTCTTCATCTGTCAATACAGAATTCAGAGATGCGTATGTGGGACTCTAGATTGTACCAGAGTCCAGGGTACAACAGAGCTAAAGGCTGTCACTGCCTTTTCTATTGTTCTGCCTCATCTAATTGTCTCTGTGGTCCAGTGTAGCTTAA---TACTACTATTATTAAAAGTAATAATCACTGCCTCACTTTTAATGATTGGGTCCACTCATCTGTCCTGTTTTGTGATGAATGAGAGAATGATTTTAGAATCCAAGCC--ttt-----------ttttttttgaagacagagttttgctcttgttgtccaggctggagtgcaacggtacaatctcagctcaccgcaacctctgcctcc--gattcaagcgattctgctccctcagcctcctgagtagctgggattacaggcatgcacaactacacctggctaattttgtatttttagtagagacagtgtttctccatgttggtcaggctggtctcgaactcttgacctcaggtgatccgcccacctcggcctcccaaagtgctaggattacaggtgtgagccaccatgccgggccGCATCCAAGCCTCTTTTCCAGGAGCAAGAAATACTACAGTGAACAAAATCTCCCATTGTTAATTCAGTGTAGAAACTCATGAGAAAAAAGCAAAAAATTTT-AAGGAGATAAATTAG---------AAAACAACATGTGCATATGGATACGTGGACAAAAAAATTAAACTACCTAGAGATCTCGAATGTGTGTTAACCTAATACAAGGACTATTATAGAATACATGTGGGCAAGAATCACTCAACCCACTTTGTCATGGAAAATGTCTTTGAGGATGTGACAGGTTTGGTAAGAACAAAAAAATGAGAAAGTGGTCATTATATGAAGATGCAGAAAAATAATATTATTCAATATAGGATCAGCTGATTGAAGTAT----TCAACAAATATGCAGAAAGTTTCCTAGTGTGGACAACACTTATTTGATTATGAGGACATTTAATAAGTGCTGTGAAGTAACATAGATCTGTATTCACAGATGTGCAATAAA---TTAAGTAAAAATCAATAAAGACATAAAATGAGAAAAAAACCTATCTACAATAAAACCATGAATCTCAAATCATTGGATGGAGAGAAATATACATACACAGAATACTCTCTGAGAATAACTAGAATAAGGAGATATGTggccaggtgcagtggctcacacctgtaatcccagcactttgggaggtcgaggtgggaggatcacttgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccccgtctctact-aaaaatacaaaattagccggaaatggtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56067634 1826 + 60714840 ctcccaggttcaagcaattcttctgtctcagcctccagagtagttgggactacaggggcctgccaccacgcctggctaatttttgtatttttagtagagacagtgcttcaccttgttggtcaggctggtcttgaactcctgacctcagatgatccacccgccttggactcccaaagtgctgggGCCACCATGCCCAGACCTCTCTTCCCTTCTCATGGGAGAATTGTGTAACCATCCTTGCTAACCTCAACTTCCACCTCAGATGGAGCACTGTATAATTTCCTTCCTCAAATTTGTTCAAGTTCTTGGGCCTCATTGAGGTCACCACCAACCTCTCGGTTTTGGGGGATATTAAGAGTTTAGTTTTGC-AACCACAACTCAGTGACAGAAAAAAAGGAATGCAAAGACACAGGAATG-------------------------------CTTAACTGTGCTCCTTTCTCATCTCAAATTTGTTCCCAAATTAGCTAAACCCATGCTTAACCCCTTAAGGTAAACACCTCTAGTAACTCTTCATCTGTCAATACAGAATTCAGAGATGCACATGTGGGACTCTAGGTTGTACCAGAGTCCAGGATACAACAGAGCTAAAGGCTGTCACTGCCTTTTCTATTGTTCTGCCTCATCCAATTATCTCTGTGCTCCAGTGCAGCTTAA---TACTACTGCTAATAAAAGTAATAATCACTGTCTCACTTTTAATGGATGGGCCCACCCATCTGTCCTGTTTCGCGATGAATGAGAGAATGATTATAGCATCCAAGCCTttttgttttgttttgtttttttttgagacagagttttgctcttgttgcccaggctggagtgcaatggtgcgatctcagctcactgcaacctctgcctcccagattcaagcgattctcctccccgagcatcct--gtagctgggattacaggcatgcacaactacgcctggctaattttgtatttttagtagagacagggtttctccatgtt-gtcaggctggtctcgaactcctgacctcaggtgatctgcccaccttggtctcccaaagtgctaggattacaggtgtgagccaccatgccgggccGTATCCAAGCCTCTTTTCCAGGAACAAGAAATACTACAGTGAAAAAAATCTCCCATTGTTAATTCAATGTAGAAACTCATGAGAAAAAAGCAAAAATTTTT-AAGGAGATAAATTAG---------AAAACAACATGTGCAGATGGATACATGGA-AAAAAAATTAAGCTACCTAGAGATCTCGAATATGTGTTAACCTAATACAAGGACTATTAGAGAATACAGGTGAGCAAGAATCACTTAACCCACTTTGTCGTGGAAAATGTCTTTGAGGATGTGACAGGTTTGGTAAGAACCAAACAATGAGAAGGTGGTCAGTATATGAATATCCAGAAAAATAATATTATTCAATATAGGATCAGCTGATTGAAGTATTTTGTCAACAAATATGCAGAAAGTTTCCTAGTGTGGACAACACTTATTTGGTTATGAGGAAATTTAGTAAGTGCTGTGAAGTAACATAGATCTGTATTTACAGATGTGCAATAAA---TTAAGTAAAAATCAATAAAGACATAAAATGAGAAAAAAACCTATCTACAATAAAACCATGAATCTCAAATCATTGGATGGGGAGAAATATACATACACAGAATACTCTCTGAGAATAACTAGAATAAGGAGTTATGTggccgggtgcagtggctcacacctgtaatcccagcactttgggaggtcgaggtgggtggatcacttgaggtcaggagttcaagaccagcctgaccaacatggtgaaacgctgtatctact-aaaaatacaaaattagctggaaatggtgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102850021 1823 - 106955855 ctcccaggttcaagcaattcttttgtctcagcctccagagtagttgggactacaggggcctgccaccacgcctggctaatttttgtatttttagtaaagacagtggttcaccttgttggtcaggctggtctcgaactcctgacctcagatgatccacccgccttggactcccaaagtgctggggccaccgcgcctggACCTCTCTTCCCTTTTCATGGGAGAATTGTGTAACCGTCCTTGCTAACCTCAACTTCCACCTCAGATAGGGCACTGTATGATTTCCTTCCTCAAATTTGTTCAAGTTCTTGGGCCTCATTGAGGTCACCACCAACCTCTCGG-TTTGGGGGATATTAAGAGTTTAGTTTTGC-AACCACAACTCAGTGACAG-AAAAAAGGAATTCAAAGACACAGGAGTG-------------------------------CTTAAGTGTGCTCCTTTCTCATCTCAGATTTGTTCCCAAATTAGCTAAACCAATGCTTAACCCCTTAAGGTAAACACCTCTAGTAACTCTTCATCTGTCAATACAGAATTCAGAGATGCGTATGTGGGACTCTAGGTTGTACCAGCGTCCAGGATACAACAGAGCTAAAGGCTGTCACTGCCTTTTCTATTGTTCTGCCTCATCCAATTGTCTCTGTGGTCCAGTGCAGCTTAA---TACTACTACTAATAGAAGTAACAAGCACTGCCTCACTTTTAATGATTGGGTCCACTCATCTGCACTGTTTTGTGATGAATGGGAGAATGATTATAGCTTCCAAGACttttt--------tttttcttttttgagacagagttttgctcttgttgcccaggctggagtgcaatggtgcgatcttggctcactgcaacctctgcctcccagattcaagtgattctcctccctcagccccctgagtagctgggattacaggcatgcacaactacacctggctaattttgtatttttagtagagacagggtttcttcatgttggtcagtctggtctcgaactcctgacctcaggtgatccgcccacctctgcctcccaaagcactgggattacaggtgtgagccaccatgccgggcTGCATCCTAGCCTCTTTTCCAGGAGCAAGAAATACTACAGTGAACAAAATCTCCTATTGTTAATTCAATGTAGAAACTCATGAGAAAAAAACAAAAATTTTT-AAGGAGCTAAATTAG---------AAAAAAACATGTGCAGATGGATACATGGACAAAAAAATTAAGCTACCTAGAGATCTCGAATGTGTGTTAACCTAATACAAGGACTATTAGATAATGCAGGTGAGCAAGAATCACTTAAACCACTTTGTCATGGAAAATGTCTTTGAGGATGTGACAGGTTTGGTAAGAACAGAACAATGAGAAGGTGGTCATTATATGAAGATCCAGAAAAATAATGTTATTCAATATAGGATCAGCTGATTGGAGTATTTTGTCAACAAACATGCAGAAAGTTTCCTAGTGTGGATAACGCTTATTTGATTATGAGGAAATTTAATAAATGCTGTGAAGTAACATAGATCTGTATTTACAGATGTGCAATAAATTGTTAAGTAAAAATCAGTAAAGACACAAAATGAGAAAAAAACCTATCTACAATAAAACCATGAATCTCAAATCATTGGATGGAGAGAAATATACATACACAGAATACTCTCTGAGAATAACTAGAATAAGGAGATATGTggctgggtgcagtggctcacacctgtaatcccagcactttgggaggtcgaggtgggtggatcacttgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccccatctctact-aaaaatacaaaattagccggaaatgatgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55204120 1820 + 59248254 ctcccaggttcaagcaattctcctgtctcagcctccagagtagctgggactataggcacgtgccaccatgaccgactaatttttgcatttttagtagagacggggcttcaccttgttggtcaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcccaaagtgctgggGCC-CCACACCTGGACCTCTCTTGCCTTCTCATGGAAGAATTGTGTAACAGTCCTTGCTAACCTCAACTTCCACCTCAGACGGAGCACTGTATGATTTCCTTCCTCAAATTTGTTCCAGTTCTTGGGCCTCATTGAGGTCACCACCAACCTCTCGG-TTTGGGGGATAGTAAGAGTTTAGTTTTGC-AACCACAACTCAGTGACAG-AAAAAAGGATTTCAAAGACACAGCAGTG-------------------------------CTTAACTATGCTCCTTTCTCATCTCAAATTTCTTCCCAAATTAGCTAAACCCATGCTTAACCCCTTAAGGTAAATACCTCTCGTAACTCTTCACCTGTCCATACAGAATTCA------TGTGTGTGTGACTCTAGGTTGTACCAGAGCCCAGCATACAACAGAGCCAAAGGCTGTCACTGCCTTTTCTATTGTTCTGCCTCATCCAATTATCTCTGTGGTCCAGTGCAGCTTAA---TACTACTACTACTAAAAGTAATAATCACTGACTCACTTTTAATGATTGGGTCCACCCATCTGTCCTGTTCTGCAAT--------GAATGACTATAGCATCCAAACCttttt-tttttttttttttttttttgaggcagagttttgctcttgttgcccaggctggagtgcaatggtgagatcttggctcacggcaacctctgcctcccagattcaaccgattcgcctccctcagtctcctgagtagctgggattacagacatgcgcaactatgcctgtctaattttgtatttttaatagagacagggtttctccatgttggtcaggctggtcccgaactcctgacctcagatgatctgcccaccttggcctcccaaagtgctgggattacaggtgtgagccaccatgccaggccGCATCCAAGCCTCTTTTTCAGGAACAAGAAACACTACAGTGAACAAAATCTCCCATTGTTAATTCAATGTATAAACTCATGAGAAAAAAGCAAAAAATTTTTAAGGAGATAAATTAG---AAAAAAAAAAAACCATGTGCAGACGGATACATGGA-CAAAAAATTAAGCTACCTAGAGATCTCAAATATGTGTTAACCTAATACAAGGACTATTAGAGAATATAGGTGAGCAAGAATCACTTAACCTACTTTGTCATGGAAAATGTCTTTGCGGATGTGACAGGTTTGGTAAGAACCAAACAATGAGAAGGTGGTCACTATATAAAGATCCAGAAAAATAATATTATTCAATATAAGATCAGCTGATTGAAGTATTTTGTGAACCAATATGCAGAAAGTTTCCTAGTGTGGACAATACTTATTTAATTATGAGCAAATTTAATAAGTGATGTGAAGTAACATAGATCTGTATTTACAGATGTGCAATAAATTGTTAAGTAAAAATCAATGAAGAAATAAAATGAG-AAAAAACCTATCTACAATAAAACCATGAATCTCAAATCATTGGATGGAGAGAAATATACATATGCAGAATACTCTCTGAGAAGAACTAGAATAAGGAGATATGTggccgggtgcagtggctcacacctgtaatcccagcacttcatgaggtcgaggtgggtggatcacttgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctctacc-aaaaatacaaaattagccggaaatggtgg i macFas5.chr19 T 53931 C 0 s papAnu2.chr19 47311305 1821 + 51301725 ctcccaggttcaagcaattctcctgtctcagcctccagagtagctgggactacaggcacgtgccaccatgcccggctaatttttgcatttttagtagagac--ggcttcaccttgttggtcaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcccaaagtgctggggcc-gCACACCTGGACCTCTCTTGCCTTCTCATGGGAGAATTGTGTAACAGTCCTTGCTAACCTCAACTTCCACCTCAGACGGAGCACTGTATGATTTCCTTCCTCAAATTTGTTCCAGTTCTTGGGCCTCATTGAGGTCACCACCAACCTCTCGG-TTTGGGGGATAGTAAGAGTTTAGTTTTGC-AACCACAACTCAGTGACAG-AAAAAAGGATTTCAAAGACACAGCAGTG-------------------------------CTTAACTATGCTCCTTCCTCATCTCAAATTTCTTCCCAAATTAGCTAAACCCATGCTTAACCCCTTAAGGTAAATACCTCTCGTAACTCTTCACCTGTCCATACAGAATTCA------TGTGTGTGTGACTCTAGGTTGTACCAGAGCCCAGCATACAACAGAGCCAAAGGCTGTCACTGCCTTTTCTATTGTTCTGCCTCATCCAATTATCTCTGTGGTCCA-TGCAGcttaa---tactactactactaaaagTAATAATCACTGACTCATTTTTAATGATTGGGTCCACCCATCTGTCCTGTTTTGCAAT--------GAATGACTATAGcatccaaatcttttt-tttttttttttttttttttgaggcagagttttgctcttgttgcccaggctggagtgcaatggtgagatcttggctcaccgcaacctctgcctcccagattcaagcgattctcctccctcagtctcctgagtagctgggattacagacatgtgcaactatgcctgtctaattttgtatttttaatagagacagggtttctccatgttggtcaggctggtcccgaactcctgacctcagatgatctgtccaccttggcctcccaaagtactgggattacaggtgtgagccaccatgccaggccgcATCCAAGCCTCTTTTTCAGGAGGAAGAAATACTACAGTGAACAAAATCTCCCGTTGTTAATTCAATGTATAAACTcatgagaaaaaagcaaaaatttttaaaggagataaattagaaaaaaaaaaaaaaaacatgtgcaGACGGCTACATGGA-CAAAAAAGTAAGCTACCTAGAGATCTCAAATGTGTGTTAACCTAATACAAGGACTATTAGAGAATATAGGTGAGCAAGAACCACTTAACCCACTTTGTCATGGAAAATGTCTTTGCGGATGTGACAGGTTCGGTAAGAACCAAACATTGAGAAGGTGGTCATTATATGAAGAtccagaaaaatattattattcaataTAAGATCAGCTGATTGAAGTATTTTGTGAACCAATATGCAGAAAGTTTTCTAGTGTGGATAACAGTTATTTAATTATGAGGAAATTTAATAAGTGCTGTGAAGTAACATAGATCTGTATTTACAGATGTGCAATAAATTGTTAAGTAaaagtcaataaagaaacaaaatgag-aaaaaacctATCTACAATAAAACCATGAATCTCAAGTCATTGGATGGAGAGAAATATACATACGCAGAATTCTCTCTGAGAAGAACTAGAATAAGGAGATacgtggccgggcgcagtggctcacacctgtaatcccagcacttcctgaggtcgaggtgggtggatcacttgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctctactaaaaaatacaaaattagccagaaatggtGG i papAnu2.chr19 C 0 I 40238 s chlSab2.chr6 47001292 1836 + 50890351 ctcccaggttcaagcaattctcctgtctcagcctccagagtagctgggactataggcacgtgccaccatgaccaactaatttttgcatttttagtagagatggggcttcaccatgttggtcaggctggtcttgaactcctgacctcaagtgatccacccaccttggcctcccaaagtgctgggGCC-CCACACCTGGACCTCTCTTGCCTTCTCATGGGAGAATTGTGTAACAGTCCTTGCTAACCTCAACTTCCACCTCAGACGGAGCACTGTATGATTTCCTTCCTCAAATTTGTTCCAGTTCTTGGGCCTCGTTGAGGTCACCACCAACCTCTCGG-TTTGGGGGATAGTAAGAGTTTAGTTTTGC-AACCACAACTCAGTGACAG-AAAAAAGGATTTCAAAGACACAGCAGTGCTTAATTATGCTCCTTTCTCATCTCAAATTTCTTAACTATGCTCCTTTCTCATCTCAAATTTCTTCCCAAATTAGCTAAACCCATGCTTAACCCCTTAAGGTAAATACCTCTCATAACTCTTCACCTGTCCATACAGAATTCAGAGATGGGTATGTGGGACTCTAGCTTGTAC-----------------CAGAGCTAAAGGCTGTCACTGCCTTTTCTACTGTTCTGCCTCATCCAATTATCTCTGTGGTCCAGTGCAGCTtaatactactactactactaAAAGTAATAATCACTGACTCACTTTTAATGATTGGGTCCACCCATCTGTCCTGTTCTGCAAT--------GAATGACTATAGCATCCAAACC-----------ttttttttttttttgaaacagagttttgctcttgttgcccaggctggagtgcaatggtgagatcttggctcactgcaacctctgcctcccagattcaagcgattctcctccctcagtctcctgagtagctgggattacagccatgcgcaactatgcctgtctaattttgtatttttaatagagacagggtttctccatgttggtcaggctggtcccgaactcctgacctcagatgatctgcccaccttggcctcccaaagtgctgggattacaggtgtgagccaccatgccaggccGCATCCAAGCCTCTTTTTCAGGAGGAAGAACTACTACAGTAAACAAAATCTCCCATTGTTAATTCAATGTATAAACTCATGAGAAAAGAGCAACAATTTTTTAAGGAGATAAATTAGAAAAAAAAAAAAAAAACATGTGCAGACGGATACATGGA-CAAAAAATTAAGCTACCTAGAGATCTCAAATGTATGTTAACCTAATACAAGGACTATTAGAGAATATAGGTGAGCAAGAATCACTTAACCTACTTTGTCATGGAAAATGTCTTTGCGGATGTGACAGGTTTGGTAAGAACCAAACAATGAGAAGGTGGTCACTATATAAAGATCCAGAAAAATAATATTATTCAATATAAGATCAGCTGATTGAAGTATTTTGTGAACCAATATGCAGAAAGTTTCCTAGTGTGGACAATAATTATTTAATTATGAGGAAATTTAATAAGTGATGTGAAGTAACATAGATCTGTATTTACAGATGTGCAATAAATTGTTAAGTAAAAATCAATAAAGAAATAAAATGAG-AAAAAATCTATCTACAATAAAACCATGAATCTCAAATCATTGGATGGAGAGAAATATATATATGCAGAATACTCTCTGAGAAGAACTAGAATAAGGAGATATGTggccgggtgcagtggctcacacctgtaatcccagcacttcatgaggtcgaggtgggtggatcacttgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctctact-aaaaatacaaaattagccggaaatggtgg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e calJac3.chr22 45533798 33934 + 49145316 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=114222.000000 s hg38.chr19_GL949747v2_alt 285388 95 + 729520 tgcatgcctgt-aatcccagctactcaagaggctgaggcaggagaatcgcttgagcctgggaggcggaggttgcagtgagcagagatcacgccact s panTro4.chr19 59240420 96 + 63644993 tgcatgcctgtaaatcccagctactcaagaggctgaggcaggagaatcacttgagcctgggaggcagaggttgcagtgagcagagatcacgccact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56069460 96 + 60714840 tgcatgcctgtaaatcccagctactcaagaggctgaggcaggagaatcgcttgagcctgggaggcagaggttacagtgagcagagatcacgccact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102851844 95 - 106955855 tgcatgcctgt-aatcccagatactcaagaggctgaggcaggagaatcgcttgagcccggaaggtggaggttgcagtgagcagagatcacgccact i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55205940 95 + 59248254 tgcacgtctgt-agtcccagctgctcgagaggcttaggcaggagaatcacttgagcccagaaggtagaggttgcagtgagccaagatcgtgccatt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47003128 95 + 50890351 tgcacacctgt-agtcccagctactcgagaggcttaggcaggagaatcgcttgagcccggaaggtagaggttgcagtgagccgagatcgcgccatt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e calJac3.chr22 45533798 33934 + 49145316 I e papAnu2.chr19 47313126 40238 + 51301725 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=3279.000000 s hg38.chr19_GL949747v2_alt 285483 2 + 729520 gt s panTro4.chr19 59240516 2 + 63644993 gt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56069556 2 + 60714840 gt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102851939 2 - 106955855 gt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55206035 2 + 59248254 gt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47003223 2 + 50890351 gt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45567732 2 + 49145316 GC i calJac3.chr22 I 33934 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e papAnu2.chr19 47313126 40238 + 51301725 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=280393.000000 s hg38.chr19_GL949747v2_alt 285485 154 + 729520 acAGGAAGTTTCAAACCCAGGAGAGGTTATCTTTCAAGTACTCAGTGTTGTGGTTTCTCCTGCCAGGGTGACAACCTGATGATTATGGAAATCTAATCAGAAAACTGCTATCTTGCTTTTATTCCTACCTCCACAGGATGAAAACAGTTAATGG s panTro4.chr19 59240518 154 + 63644993 acAGGAAGTTTCAAACCCAGGAGAGATTATCTTTCAAGTACTCAGTGTTGTGGTTTCTCCTGCCAGGGTGACAGCCTGATGATTATGGAAATCTAATCAGAAAACTGCTATCTTGTTTTTATTCCTATCTCCACAGGATGAAAACAGTTAATGG i panTro4.chr19 C 0 I 1627 s ponAbe2.chr19 56069558 154 + 60714840 acAGGAAGTTTCAAACGCAGGAGAGATTATCTTTCAAGTCCTCGGTGTTGTGGTTTCCTCTGCCAGGGTGACAACCTGATGATTATGGAAATCTAATCAGAAAACTGCTATCTTGCTTTTATTCCTACCTCCACAGGATGAAAACAGTTAATGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102851941 154 - 106955855 acAGGAAGTTTCAAACCCAGGAGAGATTATCTTTCAAGTTCTCAGTGTTGTGGTTTCCCCTGCCAGGGTGACAACCTGATGATTATGGAAATCTAATCAGAAAACTGCTATCTTGCTTTTATTCCTACCTCCACAGGATGAAAACAGCTAATGG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55206037 154 + 59248254 acAGGAAGTTTCAAACCCAGGAGAGATTATCTTTCAAGTACTCAGTGTTGTGGTTTCCCCTGCCAGGGTGACAACCTGATGATTATGGAAATCTAATCAGAAAACTGCTATCTTGCTTTTGTTCCTGCCTCCACACGATGAAAACAGTTACTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47353364 142 + 51301725 ACAGTGGGTGTCATACCCAGGGGAGATTAACTTTCAGTTCC-------TGCAGTTGCCCCTACC-GGCCGACAATCTGGTGCTCATAGAAACCTGCTCAGAGAA----TCTCTTGCTTTTGTTCCTTCCTCAACACAATGGCCACGGTTACCGG i papAnu2.chr19 I 40238 C 0 s chlSab2.chr6 47003225 154 + 50890351 acAGGAAGTTTCAAACCCAGGAAAGATTATCTTTCAAGCACTCAGTGTTGTGGTTTTCCCTGCCAGGGTGACAACCTGATGATTATGGAAATCTAATCAGAAAACTGCTATCTTGCTTTTGTTCCTACCTCCACACAATGAAAACAGTTACTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45567734 139 + 49145316 ACAGTGGGTGTCATATGCAGGGGAGAGTCACTTTCAAGTCC-------TGTGGTTGC--------AGGTGACAGCCTGGTGCTCATAGGAATCTGCTCAGAAAATCTCTATCTTGTTTCTGTTCCTTCCTCAACACAATGGCCATGGTTACCGG i calJac3.chr22 C 0 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=250217.000000 s hg38.chr19_GL949747v2_alt 285639 121 + 729520 TAGAGACAAAATATGTCCAGAGTAGACAGGAGTCACAGAAAAAGTGAATTCTGATACGTTCTTTCCCAGGAAGTTACTGGTACAGAAGTTTAGAACTGAGATACCTTTTGGAAACAAGGAT s panTro4.chr19 59242299 121 + 63644993 TGGAGACAAAATATGTCCAGAGTAGACAGGAGTCACAGAAAAAGTGAATTCTGATACGTTCTTTCCCAGGAAGTTACTGGTACAGAAGTTTAGAACTGAGATACCTTTTGGAAACAAGGAT i panTro4.chr19 I 1627 C 0 s ponAbe2.chr19 56069712 121 + 60714840 TGGAGACAAAATATGTCCAGAGTAGACAGGAGTCACAGAAAAAGTGAATTCTGATGCATTCTTTCCCAGGAAGTTACTGGTACAGAAGTTTAGAACTGAGATACCTTTTGGAAACAAGGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102852095 121 - 106955855 TGGAGACAAAATATGCCCAGAGTAGACAGGAGTCACAGAAAAAGTGAATTCTGATACGTTCTTTCCCAGGAAGTTACTGGTACAGAAGTTTAGAACTGAGATACCTTTTGGAAACAAGGAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55206191 121 + 59248254 TGGAGACAAAATATGTCCAGAGTAGACAGAGGTCACAGAAAAAGTGAATTCTGACACGTTCTTTCCCAGGAAGTTACTGGTACAGAAGTTTAGAGCTGAGAGACCTTTTGGAAATAAGGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47353506 121 + 51301725 TGGAGACAAAATATGTCCGGAGTGGACTAGAGTCCaaaaaaaaGGTACATCTGGCATTTCCTTGCCTAGGAAGTCGCTGGCACAGAAGTTCAGAAATGAGTGAGCTTTTGAAAACAAGAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47003379 121 + 50890351 TGGAGACAAAATATGTCCAGAGTAGACAGAGGTCACAGAAAAAGTGAATTCTGACATGTTCTTTCCCAGGAAGTTACTGGTACAGAAGTTTAGAACTGAGAGACCTTTTGGAAATAAGGAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45567873 120 + 49145316 TGGAGACAAAATACGTCCAGAGTGGACTGGAGTCCAAGAAAAGATGTA-TCTGGCATCGCCTTTCCTAGAAAGTCACTGGGACAGAAGTTCAGAAATGAATGAGCTTTTGAAAACAAGAAT i calJac3.chr22 C 0 I 320 e canFam3.chr1 102764864 7246 + 122678785 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=5600.000000 s hg38.chr19_GL949747v2_alt 285760 2 + 729520 GG s panTro4.chr19 59242420 2 + 63644993 GG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56069833 2 + 60714840 GG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102852216 2 - 106955855 GG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55206312 2 + 59248254 GG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47353627 2 + 51301725 GG i papAnu2.chr19 C 0 T 40453 s chlSab2.chr6 47003500 2 + 50890351 GG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45568313 2 + 49145316 GG i calJac3.chr22 I 320 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=185777.000000 s hg38.chr19_GL949747v2_alt 285762 142 + 729520 CATTCTGCCTTTGATGGATGGAAGAGTACTATCCCAGATTTAGATAGAGTTTGCTAAAGGCGTCTATCTT-AGAGTGGCTGAGCCATCTCCACTTCAAGCTATGACTTTCTGTGAATTACCCACCCACTTGTCCTTCACAATA s panTro4.chr19 59242422 142 + 63644993 CATTCTGCCTTTGATGGATGGAAGAGTACTATCCCAGATTTAGATAGAGTTTGCTAAAGGCGTCTGTCTT-AGAGTGGCTGAGCCATCTCCACTTCAAGCTATGACTTTCTGTGAATTACCCACCCACTTGTCCTTCACAATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56069835 115 + 60714840 CATTCTGCCTTTGATGGATGGAAGAGTACCATCCCAGATTTAGATAGAGTTTGCTAAAGGCGTCTATCTT-AGAGTGGCTGAGCCTTCTCCACTTCAAGCTATGACTTTCTGTGAA--------------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102852218 136 - 106955855 CATTCTGCCTTTGATGGATGGAAGAGTACCATCCC------AGATAGAGTTTGCTAAAGGTGTCTATCTT-AGAGTGGCTGAGCCATCTCCACTTCAAGCTATGACTTTCTGTGAATTACCCACCCACTTGTCCTTCACAATA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55206314 118 + 59248254 CATTCTGCCTTTGATGGATGGAAGAGTACCATCCCAGATTTAGATAGAGTTTGCTAAAGGCATCTATCTT-AGAGTGGCTGAGCCATCTCCACTTCAAGCTATCACTCTCTGTGAATTA------------------------ i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47003502 142 + 50890351 CATTCTGCCTTTGATGTATGGAAGAGTACCATCCCCGATTTAGATAGAGTTTGCTAAAGGCATCTATCTT-AGAGTGGCTGAGCCATCTCCACTTCAAGCTATCACTCTCTGTGAATTACCCACCCACTTGCCCTTCAGAATA i chlSab2.chr6 C 0 I 32 s calJac3.chr22 45568315 128 + 49145316 CATTCTGCCTTTCATAAATGGGAGAATAACATCCCAGATTTATTTAGAGTTTAATAAAGGTGTTCATCTTCAGAGCAGCTGAGCAAACTCAACCTTGAACTTCCACTCTCCATGAGTTCCCTGACCAC--------------- i calJac3.chr22 C 0 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e papAnu2.chr19 47353629 40453 + 51301725 T e rheMac3.chr19 60158965 71803 + 64156825 T a score=346095.000000 s hg38.chr19_GL949747v2_alt 285904 174 + 729520 AGAGCTTACCCACCCACTTGTCCTACAGAATAAGAGGGACCTTTTAGTCTGCTCTTCTGATTGCGGACCTGATTCCACAGGTGCCTGGGGCATCTTTGCAATCCC------------TAGGAATCAGCACCATGGACAGGGGCAAGGAATAGGGTCCACTCCTCTCTCCACTTCAGCTGGACCTCT s panTro4.chr19 59242564 174 + 63644993 AGAGCTTACCCACCCACTTGTCCTGCAGAATAAGAGGGACCTTTTAGTCTGCTCTTCTGATTGCGGACCTGATTCCACAGGTGCCTGGGGCACCTTTGCAATCCC------------TAGGAGTCAGCACCATGGACAGGGGCAAGGAATAGGGTCCACTCCTCTCTCCACTTCAGCTGGACCTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56069950 169 + 60714840 -----TTACCCACCCACTTGTCCTACAGAATAAGAGGGACCTTTTAGTCTGCTCTTCTGATTGCGGACCTGATTCCACAGGTGCCTGGGGCATCTTTGCAATCCC------------TAGGAATCAGCACCATGGACAGGGGCAAGGAATAGGGTCCACTCCTTTCTTCACTTCAGCTGGACCTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102852354 174 - 106955855 AGAGCTTACCCACCCACTTGTCCTACAGAATAAGAGGGACCTTTTAGTCTGCTCTTCTGATTGCAGACCTGATTCCACAGGTGCCTGGGGCATCTTTGCAATCCC------------TAGGAATCAGCACCATGGATAGGAGTAAGGAATAGGGTCCACTCCTTTCTCTACTTCAGCTGGACCTCT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55206432 166 + 59248254 --------CCCACCCACTTGTCCTACAGAATATGAGGGACCTTTTAGTCTGCTCTTCCGGTTGCAGACCTGATTCCACAGGTGCCTGGGGCATCTTTGCCATCCC------------TAGGAATCAGCACCATGGACAGGGACAAGGACTCGTGTCCACTCCTCTCTCCACTTCAGCTGGACCTCt i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47313176 174 + 51301725 aGAGCTTACCCACCCACTTGCCCTTCAGAATAAGAAGGACCTTTTAGTCTGCTCTTCCGATTACGGACCTGATTCCACAGGTGCCTGGGACATCGTTGCCATCCC------------TAGGAATCAGCACCATGGACAGGGACAAGGACTAGGGtccactcccctctccacttcagctggacctct i papAnu2.chr19 T 40453 I 2 s chlSab2.chr6 47003676 174 + 50890351 ATAGCTTACCCACCCAGTTGCCCTTCAGAATAAGAGGGACCTTTTAGTCTGCTCTTCCGATTGCGGACCTGATTCCACAGGTGCCTGGGGCATCTTTGCCATCCC------------TAGGAATCAGCACCATGGACAGGGACAAGGACTAGGGTCCACTCCTCTCTCCACTTCAGCTGGAcctct i chlSab2.chr6 I 32 I 33663 s calJac3.chr22 45568443 166 + 49145316 ----------------CCTGTCCCTTAGAATAGAAGACTCCTTTAATTCTGGTCTTCAAATTG-GGGCCTGATTCCACTGGT--TTTGGAGATGTCTGTAATCCCAAAAAAGCAAAAAAAAAATCAGCACTGTGGACAAGAGCAAGGGATGCGGTCTG-TTCTCTTCCCACTTCAGGTGGGCCTCT i calJac3.chr22 C 0 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=1911.000000 s hg38.chr19_GL949747v2_alt 286078 1 + 729520 T s panTro4.chr19 59242738 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56070119 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102852528 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55206600 1 + 59248254 t i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47313352 1 + 51301725 t i papAnu2.chr19 I 2 C 0 s calJac3.chr22 45568609 1 + 49145316 T i calJac3.chr22 C 0 I 3 e canFam3.chr1 102764864 7246 + 122678785 I e chlSab2.chr6 47003850 33663 + 50890351 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=61120.000000 s hg38.chr19_GL949747v2_alt 286079 113 + 729520 GTTCGTtttctttctttctttctttc--tttctttctttcttt---ctttctttctttctttc--------------------tttctttctttctttcttt------------------ctttcttttctctctttct-----------------------------------ctc-------------------------------------tttttctttctttt------------- s panTro4.chr19 59242739 114 + 63644993 Gttcgttttttctttttctttcttttcttttctttctttcttt---ctttctttctttctttc--------------------tttctttctttctttcttt------------------ctttcttt-ctctctttct-----------------------------------ttt-------------------------------------tctttctttctttt------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56070120 135 + 60714840 GTTCGctttctttctttctttctttc--tttctttctttcttt---ctttctttctttctttc--------------------tttctttctttctttcttt------------------ctttcttttctttctttct-----------------------------------ttct------ttctttctgtctgtctgtc---------tgtctttctttctttt------------- i ponAbe2.chr19 C 0 I 19 s nomLeu3.chr10 102852529 133 - 106955855 Gttctttctttcttttcttttctttc--ttttttcctttcctttccttttctttctttctttc--------------------tttctttctttctttcttt------------------ctttcctt-ctttctttct-----------------------------------ttcc------tcttttctctctctctc-------------cccttctttccttc------------- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55206601 216 + 59248254 tccttccttccttccttccttccttc--cttccttccttcctt---ccttccttccttccttc--------------------cttccttctttccttccttccttctttctctctctctccttccttccttcctttttcttcctctttcattatttctctctttttctctttctccccttccttccttcttttccttccttccttccttagtttctttctttctttctctttctttcttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47313353 181 + 51301725 tcctccctccctccctccctccctcc--ctcctttccttcctt---ccttccttctttctttctttttcttcctcttgcgttacttctctcttttcctctctccccttccttctttc---ccttccttcctttctttct-----------------------------------ttcccttccttcctttctttctc---------------tttctttctttctcttttgttctttc--t i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e calJac3.chr22 45568610 3 + 49145316 I e chlSab2.chr6 47003850 33663 + 50890351 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=3101.000000 s hg38.chr19_GL949747v2_alt 286192 12 + 729520 --ctctctctcctc s panTro4.chr19 59242853 12 + 63644993 --ctctctctcccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102852662 12 - 106955855 --cttccttccttc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55206817 12 + 59248254 ctttttctttct-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47313534 12 + 51301725 ctctttctttct-- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e ponAbe2.chr19 56070255 19 + 60714840 I e calJac3.chr22 45568610 3 + 49145316 I e chlSab2.chr6 47003850 33663 + 50890351 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=8088.000000 s hg38.chr19_GL949747v2_alt 286204 25 + 729520 ttcttttctt-----tctttctttctttct s panTro4.chr19 59242865 2 + 63644993 tt---------------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56070274 30 + 60714840 ttctttccttctttctctttctttctttct i ponAbe2.chr19 I 19 C 0 s nomLeu3.chr10 102852674 25 - 106955855 tttcttcctt-----cctttctttctttct i nomLeu3.chr10 C 0 I 143 s macFas5.chr19 55206829 25 + 59248254 ttcttttctt-----tctttcttttcctct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47313546 24 + 51301725 tt-ttttctt-----tctttctttttcttt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e calJac3.chr22 45568610 3 + 49145316 I e chlSab2.chr6 47003850 33663 + 50890351 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=261596.000000 s hg38.chr19_GL949747v2_alt 286229 252 + 729520 -----ctttctttct-------------ctccttcttcccttctttctttctttctttctttctttct-------Cttccttccttccaacttttatttcagacacagggagtacaagtacaaatttcttacatgggaatattgcttgatgctgaggtttggagtacggatcacatcccccaactagtgagcataatacccaataagtag-tttttaaccctcttccaccctctagtaatccacagtgtctatttttcctatccttatgctcatCTTT s panTro4.chr19 59242867 213 + 63644993 ---------------------------------------------------------tctttctttct-------Cttccttccttccaacttttatttcagatacaggaagtacaagtacaaatttcttacatgggaatattgcttgatgctgaggtttggagtacggatcacatcccccaactagtgagcataatacccaataagtag-tttttaaccctcttccaccctctagtaatccacagtgtcttttgttcctatccttatgctcatCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56070304 264 + 60714840 -----ctttctttcttttctctctctccccccttctttccttccttcctttctttcttctttctttTC-------Cttccttccttccaacttttatttcagatacagggagtacaagtacaaatttcttacatgggaatactgcttgatgctgaggtttggagtatggatcacatcccccaactagtgagcataatacccaataattag--ttttaaccctcctccaccctctagtaatccacagtgtctattgttcctatccttctgctcatCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102852842 250 - 106955855 -----ctttctttctt------------tcctttctttctttctttctttctttctttctttcttttt------ccttccttccttcc-----ttccttcagacacagggggtacaagtacaaatttcttacatgggaatattgcttgatgctgaggtttggagtacggatcacatcacccaactagtgaacataatacccaataagtagttttctaaccctcctccaccctctagtaatccacagtgtctattgttcctatccttatgctcatCCTT i nomLeu3.chr10 I 143 C 0 s macFas5.chr19 55206854 278 + 59248254 ctttcttcccttccttccttccttctttccctttctttctctctctttctctctctttccttccttcctaccttccttccttcctgccaacttttatttcagatacagggggtacaagtacaaatttcttacatgggaatattgcttgatgctgaggtttagagtatggatcacatcacccagttagtgagcatagtgcccaataagtagttttctaaccctcctacaccctctagtagtccacagtgtctattgttcctatccttatgctcatcttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47313570 276 + 51301725 ctccccttccttccttctttccctttctttctttctttctctctc--tctctctctctccttccttcctaccttccttccttcctgccaacttttatttcagatacAGGGGATACACGTACAAATTTCTTACATGGGAATATTGCTTGATGCTGAGATTTGGAGTACAGATCACATCACCCAgttagtgagcatagtacccaagaAGTAGTTTTCTAACCCTCCTACaccctctagtagtccacagtgtctattgttcctattCTTATGctcatcttt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102764864 7246 + 122678785 I e calJac3.chr22 45568610 3 + 49145316 I e chlSab2.chr6 47003850 33663 + 50890351 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=3090.000000 s hg38.chr19_GL949747v2_alt 286481 2 + 729520 TT s panTro4.chr19 59243080 2 + 63644993 TT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56070568 2 + 60714840 TT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102853092 2 - 106955855 TT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55207132 2 + 59248254 tt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47313846 2 + 51301725 tt i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19719612 2 - 122678785 TC i canFam3.chr1 T 27468 C 0 e calJac3.chr22 45568610 3 + 49145316 I e chlSab2.chr6 47003850 33663 + 50890351 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=36331.000000 s hg38.chr19_GL949747v2_alt 286483 22 + 729520 CTTTACACATTTCACCTCATAC s panTro4.chr19 59243082 22 + 63644993 CTTTACACATTTCACCTCATAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56070570 22 + 60714840 CTTTACACATTTCACCTCATAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102853094 22 - 106955855 CTTTACACATTTCGCCTCATAC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55207134 22 + 59248254 ctttACATATTTCATCTCATGc i macFas5.chr19 C 0 I 4326 s papAnu2.chr19 47313848 22 + 51301725 ctttacatatttcatctcatgc i papAnu2.chr19 C 0 T 64249 s calJac3.chr22 45568613 22 + 49145316 CTTCACGTGTTTCCTTCCACAA i calJac3.chr22 I 3 C 0 s canFam3.chr1 19719614 22 - 122678785 CTTCGTGCTTTTCCTCTCCCAC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47003850 33663 + 50890351 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=53981.000000 s hg38.chr19_GL949747v2_alt 286505 74 + 729520 TGACCACCCAGCAGGAACAAAATACCTCAATGCTGCTTGGAAAATAAGGCTCCCTCCCTTCATCTCTACCTTTC s panTro4.chr19 59243104 74 + 63644993 TGACCACCCAGCAGGAACAAAAGACCTCAATGCTGCTTGGAAAATAAGGCTCCCTCCCTTCATCTCTACCTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56070592 74 + 60714840 TGACCACCCAGCAAGAACAAAAGACCTCAATGCTGCTTGGAAAATAAGGCTCCCTCCCTTCATCTCTACCTTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102853116 74 - 106955855 TGACCACCCAGCGGGAACCAAAGACCTCAATGCTGTTTGGAAAACAAGGctcccttccttcatctctaccttcc i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45568635 73 + 49145316 TGACCACCCAAGAGCTACCAACGACCCCAGCACTGCTGGAAAAATAAAGCCTTCTCTTTTCATCTCTGCTTTT- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19719636 72 - 122678785 TGACTACCAGTGGATCCCCCATGAGCTCAGTGCTGCTGCAGATGTGATGCCCCACCCTTCAAGCGCCCTCTC-- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47003850 33663 + 50890351 I e papAnu2.chr19 47313870 64249 + 51301725 T e macFas5.chr19 55207156 4326 + 59248254 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=426381.000000 s hg38.chr19_GL949747v2_alt 286579 375 + 729520 ---TTCCCAGGCTCTCTGGAAACAACCTCTTCTGTAAAGACTTCAAGGGCAGAAGAATAAGCTGAGAAACTCAGCCCAGAGCTGCCGGAGACTGTGACTCCTGTAGTCTGTGAGGACCTTGTTGCTCAGCCAACATGAAGTGAGTCCATGAGGGTGAGGAGCTGCAGATCCCACAGACTGTTTGGGGCAGGGACAGAAGGAGTAGGTGGGGTTGTGGTGCCTCTTGCTCTGTTCCTCAGCTTCATCTCTTTTGCTCAAAGGTTGGCCCCCTACCTTTTCAAATCTTCTCATTCCACTCACCCAGCACCTTCTGTGACCCCCGAGTA-GGGTAAGGCATGGAG----AGTGAGAATGACCCCCACTTTCATGAATTTCTTCATC s panTro4.chr19 59243178 379 + 63644993 ---TTCCCAGGCTCTCTGGAAACAACCTCTTCTGTAAAGACTTCAAGGGCAGAAGAATAAGCTGAGAAACTCAGCCCAGAGCTGCAGGAGACTGTGACTCCTGTAGTCTGTGAGGACCTTGTTGCTCAGCCAACATGAAGTGAGTCCATGAGGGTGAGGAGCTGCAGATCCCACAGACTGTTTGGGGCAGGGACAGAAGGAGTAGGTGGGGTTGTGGTGCCTCTTGCTCTGTTCCTCAGCTTCATCTCTTTTGCTCAAAGGTTGGCCCCCTACATTTTCAAATCTTCTCATTCCACTCACCCAGCACCTTCTGTGACCCCTGAGTA-GGGTAAGGCATGGAGTGAGAGTGAGAATCACCCCCACTTTCATGACTTTCTTCATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56070666 379 + 60714840 ---TTCCCAGGCTCTCTGGAAACAACCTCTTCTGTAAAGACTTCAAGGGCAGAAGAATAAGCTGAGAAACTCAGCCCAGAGCTGCAGGAGACTGTGACTCCTGTAGTCTGTGAGGACCTTGTTGCTCAGCCAACATGAAGTGAGTCCATGAGGGTGAGGAGCTGCAGATCCCACTGACTGTTTGGGGCAGGGACAGAAGGAGTAGATGGGGTTGTGGTGCCTCTTGCTCTGTTCCTCAGCTTCATCTCTTTTGCTCAAAGGCCAACCCCCTACATTTTCAAATCTTCTCATTCCACTCACCCAGCACCTTCTGTGACCCCCGAGTA-GGGTAAGGCATGGAGTGAGAGTGAGAATCATCCCCACTTTCTTGACATTTTTCATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102853190 379 - 106955855 ---ttccCAGGCTTTCTGGAAACAACCTCTTCTGTAAAGACTTCAAGGGCAGAAGACTAAGCTGAGAAACTCAGCCCAGAGCTGCAGGAGACTGTGACTCCTGTAGTCTGTGGGGACCTTGTTGCTCAGCCAACATGAAGTGAGTCCATGAGGGTAAGGAGTTGCAGATGCCACGGACTGTTTGGGGCAGGGACAGAAGGAGTAGCTGGGGTTGTGGTGCCTCTTGCTCTGTTCCTCAGCTTCATCTCTTTTGCTCAAAGGCCAACCCCCTACATTTTCAAATCTTCTCATTCCACTTACCCAGCACCTTCTGTGACCCCCGAGTA-GGGTAAGGCATGGAGTGAGAGTGAGAATCACCCCCACTTTCATGACTTTTTTCATC i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47037513 378 + 50890351 ---TTCCCAGCCCCTCTGGAAACAACTTCTTCTGTAAAGACTTCAAGGGCAGAAGAATAAGATGAGAAACTCAGCCCAGGGCTGCCGGGGACTGTGACTCCTGTAGTCTGTGAGGACCTTGTTGCTCAGCCAACATGAAGTGAGTCCATGTGGGTGAGGAGCTGCAGACCCCACTGTCTGTTTGGGGCAGAGACAGCAGGAGTAGGTGGGGCTGTGGTGCCTCTTGCTGTGTTCCTCAGCTTCATCTCTTTTGCTCAAAGGTCAACCCCCTACATTTTCAAATCTTCTCATTCCACTCACCCAGCACCTTCTGTGACCTCCAAGTA-GGGTAAGGCATGGAGTTACAGTGAGAATCACCCCCACTTTCATTACTTT-TTCATC i chlSab2.chr6 I 33663 C 0 s calJac3.chr22 45568708 327 + 49145316 ---TCCCTACCCCTTCTGGAAGCAACCTCTTCTGTAAAGGTTTCATGTGCAGGA---TACACTGAGAAACTCAGCTCAGGACTTGGAGAGATTGTGACTCCTCTA--------GGACCCTCTTACTCAGCAGATGGGAAGTGCATTCATGAGAGTGAAGGGCTGCGGAACCCACATGCTGCTCGGGACAT-GACAGGAGGAACATGTAAGGCTCTGGT-------------TCCCTCACCTCCATCTCCTTTTCTAAAAGGTAAACCTCCAACATTGTTAA----TCTTCCTTCACTCA----------TCTGTGACCCCCAAGTG-AGGTAAGGCATGGGGTGAGAGTGAGAATAACTGTCTCTTTTAC------------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19719708 346 - 122678785 CTGGCCCCAGGTCCTGTGGAACCA--CTGCACTGTAAACATTTAAAGTGCAGAG----AATCAGCAAAGTTCAGCCTAGGCCTG-GGAAGGCTGTGTTTCCTGCAGGCTAAGAAGACTCTAAT--CCAGCAGACATGAAGCTTGTCCATG-GGGTGAGGGCCTGCAGTCTCCAAATGCTGCTTAGAACA-----AGAAGCAGGCTGTGGGGCTGTGGTGGCTCCCTCTGTTCTCCTCA-CCCCACCGTACCTCCTCACAGTT----CCTTTATAGTCTTCAGTCTCCTC--CCCACTCGCCTGGCTCTGCCTCTTTTCCTCTGGTGTAGGTAAGACATGAACATGGCATGGA------CTCTGTTTTTTTTATT--------- i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47313870 64249 + 51301725 T e macFas5.chr19 55207156 4326 + 59248254 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=47826.000000 s hg38.chr19_GL949747v2_alt 286954 41 + 729520 CCTTTCTGAGATGGGATTGCCCTATGACTGGTCCCTGCTGT s panTro4.chr19 59243557 41 + 63644993 CCTTTCTGAGATGGGATTGCTCTATGACTGGTCCCTGCTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56071045 41 + 60714840 CCTATCTGAGATGGGATTGCTCTATGACTGGTCCCTGCTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102853569 41 - 106955855 CCTTTCTGAGATGGGATTGCTCTTTGACTGGTCCCTGCTGT i nomLeu3.chr10 C 0 T 29063 s papAnu2.chr19 47249621 40 + 51301725 CCCCTCTGAGGTGAGTGC-CCTTCTGGCTAAGCCCCGCTTA i papAnu2.chr19 T 64249 C 0 s chlSab2.chr6 47037891 41 + 50890351 CCTTTCTGAGATGGGTTTGCCCTATGACTGGTCCCTGCTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45569035 41 + 49145316 CCTCTCTGGGCTGGGACTGCCCTGTGTCTAACCCTCTCTTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19720054 35 - 122678785 -CCTGATAAGA-GGGATCATCCAATGGTTGGGCTCCT---- i canFam3.chr1 C 0 C 0 e macFas5.chr19 55207156 4326 + 59248254 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=3414.000000 s hg38.chr19_GL949747v2_alt 286995 7 + 729520 -TTTTCCT s panTro4.chr19 59243598 7 + 63644993 -TTTTCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56071086 7 + 60714840 -TTTTCCT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47249661 7 + 51301725 -GATCCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47037932 7 + 50890351 -TTTTTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45569076 7 + 49145316 -TACTCCT i calJac3.chr22 C 0 T 25918 s canFam3.chr1 19720089 7 - 122678785 TAATTCC- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102853610 29063 - 106955855 T e macFas5.chr19 55207156 4326 + 59248254 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=37466.000000 s hg38.chr19_GL949747v2_alt 287002 36 + 729520 TCC--TTCTATCCCAGGCCGGGGCTCTCCT-AGCACAGG s panTro4.chr19 59243605 36 + 63644993 TCC--TTCTAACCCAGGCCAGGGCTCTCCT-AGCACAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56071093 37 + 60714840 TCCT-TTCTATCCCAGGCCAGGGCTCTCCT-AGCACAGG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47249668 38 + 51301725 GCTCACTCCATCCCAGCCCAGAGCTCTCCT-GGGGCAGG i papAnu2.chr19 C 0 I 177 s chlSab2.chr6 47037939 38 + 50890351 TCCTTTTCTATACCAGGCCAGGGCTCTCCT-AGCACAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543165 36 + 49145316 TCC--CTCCATCCCAGCCCAGAGCTCTCCTGGGGGCAG- i calJac3.chr22 T 25918 C 0 s canFam3.chr1 19720096 36 - 122678785 CTC--TTCCATTCCAGCCCAGATCTCTGCA-AGGACAGG i canFam3.chr1 C 0 I 2 e nomLeu3.chr10 102853610 29063 - 106955855 T e macFas5.chr19 55207156 4326 + 59248254 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=24114.000000 s hg38.chr19_GL949747v2_alt 287038 53 + 729520 GATGCATGCTAAGG-TTTAGAATCTTAACGGATGTGGTGCTTGGAGCTCCTGTA s panTro4.chr19 59243641 54 + 63644993 GATGCATGCTAAGGGTTTAGAATCTTAACGGATGTGGTGCTTGGAGCTCCTATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56071130 54 + 60714840 GATGCATGCTGAGGGTTTAGAATCTTAATGGATGTGGTGCTTGGAGCTCCTATA i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47037977 54 + 50890351 GATGCATGCTGAGGGTTTAGAATCTTAATGGATGTGGTGCTTGGAGCTCCTATA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543201 50 + 49145316 GGCCTGAGCTGAGCCTTTGAGCTCAGAGAGGACATGG---TCAGGGCCCTCAC- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19720134 50 - 122678785 --AATGACCCGAGCATCTTGGCCATCAAAGGACA-AATGAGTGGACCTCTCAC- i canFam3.chr1 I 2 C 0 e nomLeu3.chr10 102853610 29063 - 106955855 T e papAnu2.chr19 47249706 177 + 51301725 I e macFas5.chr19 55207156 4326 + 59248254 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=152793.000000 s hg38.chr19_GL949747v2_alt 287091 126 + 729520 CTGAGACCAAAATCTTTA-GGGGTCACTGGGGTGTGACAATAGGGGTAAGGAGGAACTATGTGGACCACAGCACTAGTAGGTCCCCCTGTGGGCTGAAGTCAGAGGGCTTGGAGTAAACTTGGCCTG s panTro4.chr19 59243695 126 + 63644993 CTGAGACCAAAATCTTTA-GGGGTCACTGGGGTGTGACAACAGGTGTAAGGAGGAACTATGTGGACCACAGCACTAGTAGGTCCCCCTGTGGGCTGAAGTCAAAGGGCTTGGTGTAAACTTGGCCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56071184 126 + 60714840 CTGAGACCAAAATCTTTA-GGGGTCACTGCGGTGTGACAACAGGTGTAAGGAGGAGCTATGTGGACCACAGCACTAGTAGGTCCCCCTGTGGGCTGAAGTCAAAGGACTTAGTGTAAACTTGGCCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102824547 127 - 106955855 CTGAGACCACGAGCTCCAGGGGGTCACTGGGGTGAGTCAGCAGGTAGGGGTTGGAGTTGAGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACTCATGAGGAATTCAGCCTG i nomLeu3.chr10 T 29063 C 0 s chlSab2.chr6 47038031 114 + 50890351 CTGAGACCAAAATCTTTAGGGGGTCACTG-------------GGCATAAGGAGGAGCTATGTGGACCACAGCATTAGTAGGTCCCCCTGTGGGCTAAAGTCAAAGGACTTAGTGTAAACTTGGCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543251 127 + 49145316 CTGAGACCACGAGCTCCAGGGGGTCACTGGGGTGAGACAGCAGGTAGGGGTTGGAGCTGCGTGAGCCATAGCACCTGTAGGTTCCTGCGTGGGCTGAGGTCACAGGACTCATGGGGAATTCAGCCTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19720184 127 - 122678785 CTGAGACAAGGAGCTCCAGGGAGTCACTGGGACTTGACAACAGGTAGGGGGAGGAGTTGTGTGAGCTGTAGCACCTGTAGGTCCCCTGGTGGTCTGAGGTCACAGGATTCAGGGTGAAGTTGACCTC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47249706 177 + 51301725 I e macFas5.chr19 55207156 4326 + 59248254 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=-143.000000 s hg38.chr19_GL949747v2_alt 287217 1 + 729520 A s panTro4.chr19 59243821 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56071310 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102824674 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47249883 1 + 51301725 T i papAnu2.chr19 I 177 C 0 s chlSab2.chr6 47038145 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543378 1 + 49145316 G i calJac3.chr22 C 0 I 54 s canFam3.chr1 19720311 1 - 122678785 A i canFam3.chr1 C 0 C 0 e macFas5.chr19 55207156 4326 + 59248254 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=25947.000000 s hg38.chr19_GL949747v2_alt 287218 54 + 729520 GAGAGTAAGGCCATGTCTTTCAATCGATGGTTTTGGGGAGGCACAAGTGACCGG s panTro4.chr19 59243822 54 + 63644993 GAGAGTAAGGCCATGTCTTTCAACCGATGGTTTTGGGGAGGCACAAGTGACCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56071311 54 + 60714840 GAGAGTAAAGCCATGTCTTTCAATCAATGGTTTTGGGGAGGCACAAGTGACCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102824675 54 - 106955855 TGCTGCTGAGCTTGGTGCTCTGATCTCAGACGCAGCGGGTGATGGGCTGCCCCA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47249884 53 + 51301725 ATATGTGAGACCAGCGCTTTGATTTCA-GACGCAGGGGGGCATCAGCTTCTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47038146 54 + 50890351 GAGAGTAAGGTCATGTCTTTCAATCGATGGTTTTGGGGAGGCGCAAGTGACCTG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19720312 54 - 122678785 TACGGTATAGCTGTATCCTGCAGATGAAGGTGCTGGGGAGGAGCAAGGGACCCC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45543379 54 + 49145316 I e macFas5.chr19 55207156 4326 + 59248254 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=146301.000000 s hg38.chr19_GL949747v2_alt 287272 86 + 729520 TCCTTGGACAGACAGAAGGTACCCAACCAGATCTCTGAGTAGCACTGCAAGGTCAAGTTCTCTCCCGAGGACACTAAGGGCCCTGG s panTro4.chr19 59243876 86 + 63644993 TCCTTGGACAGACAGAAGGTACCCAACCAGATCTCTGAGTAGCACTGCAAGGTCAAGTTCTCTCCCAAGGACACTAAGGGCCCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56071365 86 + 60714840 TCCTTGGACAGACAGAAGGTACCCAACCAGATCTCTGAGTAGCACTGCAAGGTCAAGTTCTCTCCCGAGGACACTAAGGGCCCTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102824729 86 - 106955855 TCCTTGGTCAGAAGGAAAGTGTCCATCCATCCCTGTGACTGACACAGCAGGGTCACATTCTCTCCTGAGGCCACCATGGGGCCCCG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47249937 86 + 51301725 TCCTTGGTCAGAAAGAAAGTGTCCGTCCATCCCTGTGACTGACACAGCAGGGTCACTTTCTCTCCtgaggccaccgtggggcccgg i papAnu2.chr19 C 0 I 69006 s chlSab2.chr6 47038200 86 + 50890351 TCCTTGGACAGACAGAAGGTACCCAACCAGATCTCTGAGTAGCACTGCAAGGTCAAATTCTCTCCCGAGAACACTAAGGGTCCTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543433 86 + 49145316 TCCTTGGTCAGAAGGAAAGTGTCCATCGGACTCTGTGACTGACACAGCAGGGTCACGTCCTCTCCTGAAGCCACCCTGGGGCCTGG i calJac3.chr22 I 54 C 0 s canFam3.chr1 19720366 86 - 122678785 TCCTTGGACAGGTGGAAGGTATTGAACCAGATCTCAGAGCGACACTGCAGGGTCACATTCTCTCCCCAGGATACTGAAGGCCCAGG i canFam3.chr1 C 0 C 0 e macFas5.chr19 55207156 4326 + 59248254 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=4011.000000 s hg38.chr19_GL949747v2_alt 287358 2 + 729520 CT s panTro4.chr19 59243962 2 + 63644993 CT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56071451 2 + 60714840 CT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102824815 2 - 106955855 CT i nomLeu3.chr10 C 0 I 30087 s chlSab2.chr6 47038286 2 + 50890351 CT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543519 2 + 49145316 CT i calJac3.chr22 C 0 T 20835 s canFam3.chr1 19720452 2 - 122678785 CT i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47250023 69006 + 51301725 I e macFas5.chr19 55207156 4326 + 59248254 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=210574.000000 s hg38.chr19_GL949747v2_alt 287360 338 + 729520 CAGAC--AAATGGAGGGTTTCTTGTACATTTCTAGGAAATATGAAGGTTGCAGTGTGTACAAAGCAGCCCCTTCCCACATGTCCTGGACCCCGAACTGAGGGACTGGCCTCCTCT-------------------------CTCTCAGCTCCTGTTAGACTCTTGGTGTGGGTCTTTGTAATCTCCAGGCCTCTCACTCTCCTTTTCTAAGTTGCTCTCCTTGGACCACTGCCTCATCGCATCCTCTACTCTAggaccctctccctggaccctcaac--ccagggatgaccctggtcccaggaccctgAGCATATAATCAAGACAGGGGGCTAggccaggcgcagtggctcacccctgtaatcccagc s panTro4.chr19 59243964 338 + 63644993 CAGAC--AAATGGGGGGTTTCTTGTACATTTCTAGGAAATATGAAGGTTGCAGTGTGTACAAAGCAGCCCCTTCCCACATGTCCTGGACCCCGAACTGAGGGACTGGCCTCCTCT-------------------------CTCTCAGCTCCTGTTAGACTCTTGGTGTGGGTCTTTATAATCTCCAGGCCTCTCACTCTCCTTTTCTAAGTTGCTCTCCTTGGACCACTGCCTCATCGTATCCTCTACTCTAGGACCCTCTCCCTGGACCCTCATC--CCAGGGATGACCCTGGTCCCAGGACCCTGAGCATATAATCAAGACAGGGGGCTAggccaggcgcagtggctcacccctgtaatcccagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56071453 338 + 60714840 CAGAC--AAAGGGAGGGTTTCTTGTACATTTCTAGGAAATATGAAGGTTGCAGTGTGTACAAAGCAGCCCCTTCCCACATGTCGTGGACCCTGAACTTAGGGACTGGCCTCCTCT-------------------------CTCTCAGCTCCTGTTAGACTCTTGGTGTGGGTCTATATAATCTCCAGGCCTCTCACTCTCCTTTTCTAAGTTACTCTCCTTGGACCACTGCCTCATCGCATCCTCTACTCTAGGACCCTCTCCCTGGACCCTCATCA-CCAGGGATGACCCTGGTCCCAGGACCCTGAGCATATAATCAAGACA-GGGGCTAggccaggtgtggtggctcacccctgtaatcccagc i ponAbe2.chr19 C 0 I 22840 s chlSab2.chr6 47038288 339 + 50890351 CAGAC--AAAGGGAGGGTTTCTTGAACATTTCTAGGAAATACCAAGGTTGTAGTGTGTACAAAGCAGCCCCTTCCCACAAGTCCTGGACCCTGAACTGGGAGACTGGCCTCCTCT-------------------------CTCTCAGCTCCTGTTAGACTCTTGGTGTGGGTCTGTATAATCTCCAGGCCTCTCACTCTCCTTTTCTAAGTTGCTCTCCTTGGATCACTGCCTCATTTTCTCCTCTACTCTAGGACCCTCTCCCTGGACCCTCATCA-CCAGGGATGACCCTGGTCCCAGGGCCCTGAGCATATAATCAAGACAGGGGGCTAggccgggcacagtagctcacccctgtaatcccagc i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19720454 342 - 122678785 -GGGCTGAGAGGGATGGTTTTGGGTATATTCCTGGGGAAAAGGAAGGTCGTGATGTGTAGAGGCCTGCCTCTCCACATATGCCCTTGACCC--AGCTGGGGGACCACCTTCGTCTCTCCAGAGACTCTGTGTGGGACCCCCTCTCAGCTCCTCTT-GTCTCTCTGAGTGGATGTCCTTCATCTCCATGACCCTCACCGGCCATTTTTCAGCCCCTGTCCCTAGAACATGGCCCCATCTCAGCCTGTGCTCC-TGACCCTCTCCCCGGACCC-CATCACCCAGGGGTGACAGTGGCCCCTGAGCCTTCAGCAGA----CAGGACATGGGGCAGGG---GGC-------TTCTCACCTGTGATC----- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45543521 20835 + 49145316 T e nomLeu3.chr10 102824817 30087 - 106955855 I e papAnu2.chr19 47250023 69006 + 51301725 I e macFas5.chr19 55207156 4326 + 59248254 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=32286.000000 s hg38.chr19_GL949747v2_alt 287698 57 + 729520 actttgggaggccgaggtgggca---------gatcacgaggtcaggagatcgagactatcctggc s panTro4.chr19 59244302 57 + 63644993 actttgggaggccgaggtgggca---------gatcacgaggtcaggagatcgagactatcctggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56094631 57 + 60714840 actttgggaggccaaggtgggca---------gatcacgaggtcaggagatcgagactatcctggc i ponAbe2.chr19 I 22840 C 0 s chlSab2.chr6 47038627 57 + 50890351 actttgggaggccaaggtgggta---------gatcacaaggtcaggagactgagactatcttgcc i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19720796 61 - 122678785 -----AGGATGTCCAGAGGGGCACTGGGTGCTGACCACGTGGAGGAGAGGTTGTGTCCACTGTAGC i canFam3.chr1 C 0 I 5885 e calJac3.chr22 45543521 20835 + 49145316 T e nomLeu3.chr10 102824817 30087 - 106955855 I e papAnu2.chr19 47250023 69006 + 51301725 I e macFas5.chr19 55207156 4326 + 59248254 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=8382.000000 s hg38.chr19_GL949747v2_alt 287755 16 + 729520 caacatggtgaaaccc s panTro4.chr19 59244359 16 + 63644993 caacatggtgaaaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56094688 16 + 60714840 caacatgatgaaaccc i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47038684 16 + 50890351 taacatggtgaaaccc i chlSab2.chr6 C 0 T 27705 e canFam3.chr1 19720857 5885 - 122678785 I e calJac3.chr22 45543521 20835 + 49145316 T e nomLeu3.chr10 102824817 30087 - 106955855 I e papAnu2.chr19 47250023 69006 + 51301725 I e macFas5.chr19 55207156 4326 + 59248254 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=2003.000000 s hg38.chr19_GL949747v2_alt 287771 8 + 729520 agtcacta s panTro4.chr19 59244375 8 + 63644993 agtcacta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56094704 8 + 60714840 aatcacta i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19720857 5885 - 122678785 I e calJac3.chr22 45543521 20835 + 49145316 T e nomLeu3.chr10 102824817 30087 - 106955855 I e chlSab2.chr6 47038700 27705 + 50890351 T e papAnu2.chr19 47250023 69006 + 51301725 I e macFas5.chr19 55207156 4326 + 59248254 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=387.000000 s hg38.chr19_GL949747v2_alt 287779 2 + 729520 cA s panTro4.chr19 59244383 2 + 63644993 cA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56094712 2 + 60714840 TA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55211482 2 + 59248254 cG i macFas5.chr19 I 4326 C 0 e canFam3.chr1 19720857 5885 - 122678785 I e calJac3.chr22 45543521 20835 + 49145316 T e nomLeu3.chr10 102824817 30087 - 106955855 I e chlSab2.chr6 47038700 27705 + 50890351 T e papAnu2.chr19 47250023 69006 + 51301725 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=8030.000000 s hg38.chr19_GL949747v2_alt 287781 11 + 729520 ggccaggtgcg s panTro4.chr19 59244385 11 + 63644993 ggccgggtgca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56094714 11 + 60714840 Tgccgggcgcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102854904 11 - 106955855 ggccgggcgca i nomLeu3.chr10 I 30087 C 0 s macFas5.chr19 55211484 11 + 59248254 ggccgggcgcg i macFas5.chr19 C 0 C 0 e canFam3.chr1 19720857 5885 - 122678785 I e calJac3.chr22 45543521 20835 + 49145316 T e chlSab2.chr6 47038700 27705 + 50890351 T e papAnu2.chr19 47250023 69006 + 51301725 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=472211.000000 s hg38.chr19_GL949747v2_alt 287792 394 + 729520 gtggctcacacctttaatcccagcactttgggaggctgtggcgggcagatcacgaggtcaggagatcgagactatcctggccaacatggtgaaaccctgtcactactaaaaatacaaaaattagcttggcatggtggcatgcgcctgtagtcccagctacttgggaggctgaggaagaagaattgcttgaactcgggaggtggaggttgcagtgagccgacatagtgccactacactccagcctgggtgacaaagcgagactccgtctc------aaaaaaaaaaa----aaGAGCGAATGGGGCTTGAAGGCTACAGACAAGAGGTTAGGACGCCATTTTGGATTTATCTTTTCCTGGAGGGCATCTGATCTTCTCCCATGGATTTAGTTACTGGTTCAGGTG s panTro4.chr19 59244396 392 + 63644993 gtggctcacgcctgtaatcccagcactttgggaggctgtggcaggcagatcacgaggtcaggagatcgagactatcctggccaacgtggtgaaaccctgtcactactaaaaatacaaaaattagcttggcatggtggcgtgcgcctgtagtcccagctacttaggaggctgaggaaggagaattgcttgaactcgggaggtggaggttgcagtgagccgagatagtgccactacactccagcctgggtgacaaagcgagactccgtctc------aaaaaaaaaaa------GAGTGAGTGGGGCTTGAAGGCTACAGACAGGAGGTTAGGACGCCATTTTGGATTTATCTTTTCCTGGAGGGGATCTGATCTTCTCCCATGGATTTAGTTACTGGTTCAGGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56094725 398 + 60714840 gtggctcacgcctgtaatcccagcactttgggaggctgtggcgggcagatcatgaggtcatgagatcgagactatcctggccaacatggtgaaaccctgtcactactaaaaatacaaacattagcttggcatggtggcgtgcacctgtagtcccagctacttgggaggctgaggcaggagagtcacttgaactcgggaggtggaggttgcagtgagccgagatcgtgccactacactccagcctgggtgacaaagcgagactccatctc------aaaaaaaaaaaaaaaaaGAGTGAATGGGGCTTGAAGGCTGCAGACAGGAGGTTAGGATGCCATTTTGGATTTATCTTTTCCTGGAGGGGATGTGATCTTCTCCCATGGATTTAGTTACTGGTTCAGGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102854915 393 - 106955855 gtggctcacacctgtaatcccagcactttgggaggtcgaggtgggcagatcacgaggtcaagagatcgagactatcctggccaatatggtgaaactctgtcactactaaaaatacaaaaattagcttggcatggtggcatgtgcctgtagtcccagctacttgggaggctgaggaaggagaattgcttgaactcgggaggtggaggttgcagtgagccgagatcgtgccactacattccagcctgggtgacaaagtgagactctgtctc------aaaaaaaaaaa-----aGAGTGAATGAGGCTTGAAGGCTACAGACAGGAGGTTAGGACGCCATTTTGGATTTATCTTTTCCTGGAGGGGATCTGATCTTCTCCCATGGATTTAGTTACTGGTTCAGCTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55211495 396 + 59248254 gtggctcaagcctgtaatcccagcactttgggaggccgaggtgggcagatcacaaggtcaggagatcgagaccatcctggccaacatggtgaaaccctgtcactactaaaaatacaaaaattagccaggcgtggtggcgggggcctgtagtcccagctacttgggaggctgaggcaggagaatcacttgaacccgggaggcggagcttgcagtgagctgaattggcaccacctcactccagcctgggtgacagagcgaggctccgtctc------aaaaaaaaaaa-aaaaaGAGTGAA-GAGGCTTGAAGGCTACAGACAGGAGGTTAGGATGCCCTTCTGGATTTATCTTTTCCTGGTGGGGATCTGACCTTCTCCCATGGATTTAGTTACTGGGTCAGGTG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47010995 402 + 50890351 gtggctcatgcctgtaatcccagcactttgggaggccgagaggggcggatcacgaggtcaggagatcgagaccatcctggccaacatggtgaaaccctgtcactactaaaaatacaaaaattagccgggcatggtggcaggcgcctgtagctccagctacccggaaggctaagccaggagaatggcgtgaatccggaaggcagagcttgcagtgagccaaattggtaccacctcactccagcctgggcgacagagcaaggctccatctcaaaaaaaaaaaaaaaaa-aaaaaGAGTGAA-GAGGCTTGAAGGCTACAGACAGGAGGTTAGGATGCCCTTCTGGATTTATCTTTCCCTGGTGGGGATCTGACCTTCTCCCATGGATTTAGTTACTGGGTCAGGTG i chlSab2.chr6 T 27705 C 0 e canFam3.chr1 19720857 5885 - 122678785 I e calJac3.chr22 45543521 20835 + 49145316 T e papAnu2.chr19 47250023 69006 + 51301725 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=382254.000000 s hg38.chr19_GL949747v2_alt 288186 218 + 729520 TGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACA-GGGAGTGTGATAATGAGAATTGAAGTGGACTGTGTGACACGCCAAGGACCAGAGCATGCAGGTGTGCAGAGATGTGGACCCAACGCTGCCTGCCATGTGGGATGTAGCCTCATGTCTCGGGCTGGGAAGAGAAGGGAATCCAACCAAGGGAAGTCAACATTAATAGAAAGGAAAG s panTro4.chr19 59244788 218 + 63644993 TGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACG-GGGAGTGTGATAATGAGAAGTGAAGTGGACTGTGTGACACGCCAAGGACCAGAGCACGCAGATGTGCAGAGATGTGGACCCAACGCTGCCTGCCATGTGGGATGTAGCCTCATGTCTCGGGCTGGGAAGAGAAGGGAATTCAACCAAGGGAAGTCAACATTAATAGAAAGGAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56095123 218 + 60714840 TGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACA-GGGAGTGTGATAATGAGAAGTGAAGTGGACTGTGTGACACGCCAAGGACCAGAGCATGCAGGTGTGCGGAGATGTGGACCCAGTGCTGCCTGCCATGTGGGATGTAGCCTCATGTTTCGGGCTGGGAAGAGAAGGGAACCCAACAAAGGGAAGTCAACATTAATAGAAAGGAAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102855308 218 - 106955855 TGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACTCA-GGGAGTGTGATAATGAGAAATGAAGTGGATTGTGTGACACGCCAAGGACCAGAGCACGCAGGTGTGCGGAGACGTGGACCCAGCGCTGCCTGCCATGTGGGATGTAGCCTTTTGTCTCGGGCTGGGAAGAGAAGGGAATCCAACCAAGGGAAGTCAATATTAATAGAAAGGAAAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55211891 214 + 59248254 TGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACA-GGGAGTGTGGTAATGAGAAATGAAGAGGACTGGCTGACACGCCATGGACCACAGTACACAGGCGTGCGGAGATGTGGACCCAACG----CTGCCATGTGGGATGTAGCCTCATGTCTCGGGCTGGGAAGAGAAGGGAATCCAACCAAGGGAAGTCAACATTAATAGAAAGGAAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47319029 215 + 51301725 TGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACATTGGAGTGTGGTAATGAGAAATGAAGAGGACTGTCTGACATGCCGTGGACCACAGTACACAGGCGTGCGGAGATGTGGACCCAACG----CTGCCATGTGGGATGTAGCCTCATGTCTCGggctgggaagagaagggaatcCAACCAAGGGAAGTCAACATTAATAGAAAGGAAAG i papAnu2.chr19 I 69006 C 0 s chlSab2.chr6 47011397 214 + 50890351 TGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACA-GGGAGTGTGGTAATGAGAAATGAAGAGGACTGGCTGACATGCCGTGGACCACAGTACACAGGCGTGCGGAGATGTGGACCCAACG----CTGCCATGTGGGATGTAGCCTCATGTCTCGGGCTGGGAAGAGAGGGGAATCCAACCAAGGGAAGTCAACATTAATAGAAAGGAAAG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19720857 5885 - 122678785 I e calJac3.chr22 45543521 20835 + 49145316 T e rheMac3.chr19 60158965 71803 + 64156825 T a score=151500.000000 s hg38.chr19_GL949747v2_alt 288404 75 + 729520 GTGTCACATTTTAATGGTCCTCCATGGATCACCCCAGACCAGTGTCTCTGCACTCAAACACCCATTCCTCCCTCT s panTro4.chr19 59245006 75 + 63644993 GTGTCACATTTTAATGGTCCTCCATGGATCACCCCAGACCAGTGTCCCTGCACTCAAACACCCATTCCTCCCTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56095341 75 + 60714840 GTGTCATATTTTAATGGTCCTCCATGGATCACCCCAGACCAGTGTCCCCGCACTCAAACACCCATTCCTCCCTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102855526 75 - 106955855 GTGTCACATTTTAATGGTCCTCCATGGATCACCCCAGACCAGTGTCCCTGCACTCAAACACTCATTCCTCCCTGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55212105 75 + 59248254 GTATCATATTTTTATGGTCCTCTACAGATCACCCCAGACCAGTGTCCCTGCACTCAAACATCCATTCCTCCCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47319244 75 + 51301725 GTATCATATTTTTATGGTCCTCTACAGATCACCCCAGACCAGTGTCCCTGCACTCAAACATCCATTCCTCCCTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47011611 75 + 50890351 GTATCATACTTTTATGGTCCTCTACAGATCACCCCAGACCAGTGTCCCTGCACTCAAACATCCATTCCTCCCTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45522686 62 + 49145316 GTGTCACATGTGCATGGTCCTCCATGGATCACCCCAGA-AATGGTCTCTGTACTTG------------TCCCTCT i calJac3.chr22 T 20835 C 0 e canFam3.chr1 19720857 5885 - 122678785 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=228258.000000 s hg38.chr19_GL949747v2_alt 288479 164 + 729520 AGAAATTGCCAgaggctgaggcaggagaatcacttgaacccgagaggcggaggttgcagtgagcccagattgcgccactgcattccagcctggtgacagagcaagactccatctcaaaaaaaa---aaaaaaaaaaaaaaaagaaagaaaagaaaagaaaga---aaaaa s panTro4.chr19 59245081 149 + 63644993 AGAAATTGCCAgaggctgaggcaggagaatcacttgaacctgagaggcggaggttgcagtgagcccagattgcgccactgcattccagcctggtgacagagcaagactccgtctcgaaaaaaa---aaaaaaaaaa---------------gaaaagaaaga---aAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56095416 130 + 60714840 AGAAATTGCCAgaggctgaggcaggagaatcacttgaacccgagaggcggaggttgcactgagcccagattgcgccactgcattccagcctggcgacagagcaagactccgtctcaaaaa-------------------------------------aaaga---aagaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102855601 143 - 106955855 AGAAATTGCCAgaggctgaggcaggagaatcacttgaacccgagaggcggaggttgcagtgagcgcagattgcgccactgcattccagcctggcaacagagcgagactccgtctcaaaaaaaa---aaaaagaaag---------------------aagga---aaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55212180 170 + 59248254 AGAAATTGCCAgaggctgaggcaggagaatcacttgaacacaagaggcggaggttgcagtgagcccagattccaccactgcattccagcctggcaacagagcgagactccgtctcaaaaaaaaaaaaaaaaaaaagaaagaaagaaaaaagaaaaacaaacaaacaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47319319 148 + 51301725 AGAAAttgccagaggctgaggcaggagaatcacttgaacccgagaggcagaggttgcagtgagcccagattgtaccactgcattccagcctggcaacagagcgagactccgtctcaaaaaaaa---------------------aaaaaagaaaaacaaacaaa-aaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47011686 163 + 50890351 AGAAATTGCCAgaggctgaggcaggagaatcacttgaacccgagaggcggaggttgcagtgagcccagattgcaccactgtactccagcctggcgacagagcgagactccgtctcaaaaaaaa---aaaaaaaagaaaagaaaagaaaAAGAAAAACAAAC----AAAAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19720857 5885 - 122678785 I e calJac3.chr22 45522748 0 + 49145316 C e rheMac3.chr19 60158965 71803 + 64156825 T a score=6398.000000 s hg38.chr19_GL949747v2_alt 288643 3 + 729520 aga s panTro4.chr19 59245230 3 + 63644993 AGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56095546 3 + 60714840 aga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102855744 3 - 106955855 aGA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55212350 3 + 59248254 aga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47319467 3 + 51301725 aga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47011849 3 + 50890351 ATA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45522748 3 + 49145316 AGA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19720857 5885 - 122678785 I e rheMac3.chr19 60158965 71803 + 64156825 T a score=66861.000000 s hg38.chr19_GL949747v2_alt 288646 28 + 729520 aaTTGCCAGCAGACAGTCCAGATGGCAT s panTro4.chr19 59245233 28 + 63644993 AATTGCCAGCAGACAGTCCAGATGGCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56095549 28 + 60714840 aaTTGCCGGCAGACAGTCCAGATGGCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102855747 28 - 106955855 AATTGCCAGCAGACGGTCCAGATGGCAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55212353 28 + 59248254 aaTTGCTAGAAGACAGTCCAGATAGCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47319470 28 + 51301725 aattgccagcAGACAGTCCAGATAGCAT i papAnu2.chr19 C 0 I 590 s chlSab2.chr6 47011852 28 + 50890351 AATTGCCAGCAGACAGTCCAGACAGCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45522751 28 + 49145316 AATGATTAACAGACAGTCCAGAAAATGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19726742 28 - 122678785 AATGACCTGCTGACAGTTTACACAGCAC i canFam3.chr1 I 5885 C 0 e rheMac3.chr19 60158965 71803 + 64156825 T a score=5164.000000 s hg38.chr19_GL949747v2_alt 288674 2 + 729520 AG s panTro4.chr19 59245261 2 + 63644993 AG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56095577 2 + 60714840 AG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102855775 2 - 106955855 AG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55212381 2 + 59248254 AG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47320088 2 + 51301725 AG i papAnu2.chr19 I 590 C 0 s chlSab2.chr6 47011880 2 + 50890351 AG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45522779 2 + 49145316 AG i calJac3.chr22 C 0 I 35732 s canFam3.chr1 19726770 2 - 122678785 AT i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60158965 71803 + 64156825 T a score=139918.000000 s hg38.chr19_GL949747v2_alt 288676 66 + 729520 GCCTCAGATGGTCTTCCCGAACCTCCTAGGACCATCAGATTCGCTTCCAAGGCTCCAGCATTCAAT-- s panTro4.chr19 59245263 66 + 63644993 GCCTCAGATGGTCTTCCCGAACCTCCTAGGACCATCAGATTCACTTCCAAGGCTCCAGCATTCAAT-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56095579 66 + 60714840 GCCTCAGATGGTCTTCCCGAACCTCCTAGGACCATCAGATTCACTTCCAAGGCTCCAGCATTCAAT-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102855777 66 - 106955855 GCCTCAGATGGTCTTCCCGAACCTCCCAGGACTAGCAGATTCACTTCCAAGGCTCCAGCATTCGAT-- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55212383 66 + 59248254 GCCTCAGATTGTCTTCCAGAACCTCCTGGGACTTTCAGATTCTCTTCCAAGGCTCCAGCACCCAAT-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47320090 66 + 51301725 GCCTCCGATTGTCTTCCAGAACCTCCTGGAACTTTCAGATTCCCTTCCGAGGCTCCAGCACCCAAT-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47011882 66 + 50890351 GCCTCAGATTGTCTTCCAGAACCTCCTGGGACTTTCAGATTCTCTTCCGAGGCTCCAGCACCCAAT-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45558513 62 + 49145316 GCCCCAGA----CTTCCAGAACCTCCTGGGATCATCAGATCTGTTCCCGAGGCTCTGCCACTCTGA-- i calJac3.chr22 I 35732 I 2 s canFam3.chr1 19726772 68 - 122678785 GCCCTACATGCTCCTCTAGAACCTTCTGGGCACAGGAGATGTATTTCCCAGGCTCTGCGATTTTGATT i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60158965 71803 + 64156825 T a score=1244399.000000 s hg38.chr19_GL949747v2_alt 288742 374 + 729520 GGTGCATTGTTCTCTCTTCTGTTCACCTTCCAGCTGCAGCTTGGGGGCTTCTCTGGCTGTGCCAATCCTGAAATATCAGAATCCCAAGGACCACCAGGATCAAGCCGGCCATGCCCATGCGGATGAGATTCTCTACTGCGTAATCCTGAAGGTGTGAGGCTGGGGATGGTGGACAAAGAGGTCACAGAGGTCAGGGCAGATCAGTATCACCCAGGACCCCTGGATGTCTCCCCAGGGCACCCATATCATC-----TTGACAGGACCTGACCCTCTGTG-CCAGTTCCATAACTGAGAGCATCTCCT--CACTCACCAGTCCCAGAGTCAGACTTGTTTTGTGACGGACTGAGGTTATCAGCTGCTCCTGAAAATCAAAACAG s panTro4.chr19 59245329 374 + 63644993 GGTGCATTGTCCTCTCTTCTGTTCACCTCCCAGCTGCAGCTTGGGGGCTTCTCTGGCTGTGCCAATCCTGAAATATCAGAATCCCAAGGACCACCAGGATCAAGCCGGCCATGCCCATGCGGATGAGATTCTCTACTGTGTAATCCTGAAGGTGTGAGGCTGGGGATGGTGGACAAAGAGGTCACAGAGGTCAGGGCAGATCAGTATCACCCAGGACCCCTGGATGTCTCCCCAGGGCACCCACATCATC-----TTGACAGGACCTGACCCTCTGTG-CCAGTTCCATAACTGAGAGCATCTCCT--CACTCACCAGTCCCAGAGTCAGACTTGTTTTGTGACGGACTGAGGTTATCAGCTGCTCCTGAAAATCAAAACAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56095645 374 + 60714840 GGTGCATTGTCCTTTCTTCTGTTCACCTCCCAGCTGCAGCTTGGGGGCTTCTCTGGCTGTACCAATCCTGAAATATCAGAATCCCAAGGACCACCAGGATCAAGCCGGCCACGCCCATGCGGATGAGATTCTCTACTGTGTAATCCCGGGGGTGTGAGGCTGGGGATGGTGGACAAAGAGGTCGCAGAGGTCAGGGTGGATCAATATCACCCAGGACCCCTAGATGTCCCCCCAGGGCACCCGCATCATC-----TTGACAGGACCTGACCCTCTGTG-CCAGTTCCATAACTGAGAGCATCTCCT--CACTCACCAGTCCCAGAGTCAGACTTGTTTTGTGACGGGCTGAGGTTATCAGCTGCTCCTGAAAATCAAAACAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102855843 374 - 106955855 GGTGCATTGTCGTCTCTTCTGTTCACCTCCCAGTTGCAGCTTGGGGGCTTCTCTGGCTGTGCCAATCCTGAAATATCAGAATCCCAAGGACCACCAGGATCAAGCCGGCCATGCCCATGCGGATGAGATTCTCTACTGTGTAATCCTGAAGGTGTGAGGCTGGGGGTGGTGGACAAAGAGGTCACAGAGGTCAGGGCAAATCAGTATCACCCAGGACCCCTAGATGTCCCCCCAGGGCACCCACGTCATC-----TTGACAGGACCTGACCCTCAGTG-CCAGCCCCATAACTGAGAGCATCTCCT--CACTCACTGGTCCCAGAGTCAGACTTGTTTTGTGATGGACTGAGGTTATCAGCTGCTCCTGAAAATCGAAACAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60087162 379 + 64156825 GGTGCACTGTCCTCTCTGCTGTTCACCTCCCGGCTGCCTCTTGGGGGCTTCTCCGGCTGCGCAGAGCCTCAAATAACAGAATCCCGAGGACCACCAGGATCAAGCCAGCCATGCCCATGCGGATGAGATTCTCCACTGTGTAATCCTGGGGATGTGAGGCTGGGGATCATGGACAAAGAGGCGACAAAGGTCAGGGCAGATCAGCATCACCCAGGACCCCTGGATGCCCACCCAGCGCACGCCCCCCATCTCCTGTTGACAGACCCTGACCCTCTGTG-CCAGTCCCATAACTGAGAGCATCTCCT--CACTCATCAGTCTTGGGGTCTGACTTGTTTTGTGATGGGCTGAGGGTCTCAGCTCCTCCTGAGAATGAAAACAG i rheMac3.chr19 T 71803 I 17 s macFas5.chr19 55212449 373 + 59248254 GGTGCATTGTCCTCTCTTCTGTTCACCTCCCAGCTGCATCCTGGGGGCTTCTCTGGCTGTGCCAATCCTGAAATATCAGAATCCCAAGGACCACCAGGATCAAGCCGGCCACGCCCATGCGGATGAGATTCTCCACAGTGTAATCCTGGGGGTGTGAGGCTGGGGATGGTGGAAAAAGAGGTCACAGAGGTCAGGGCAGATCAGTATCACCCAGGACCCCTAGATGACC-CCCAGGGCACCCACATCATC-----TTAACAGGACCTGACCCTCTGTG-CCAGTTCCATAACCGAGAGCATCTCCT--CACTCACCAGTCCCAGAGTCAGACTTGTTTTGTGACGGACTGAGGTTATCAGCTGCTCCTGAAAATCAAAACAG i macFas5.chr19 C 0 I 6 s papAnu2.chr19 47320156 373 + 51301725 GGTGCATTGTCCTCTCTTCTGTTCACCTCCCAGCTGCATCCTGGGGGCTTCTCTGGCTGTGCCAATCCTGAAATATCAGAATCCCGAGGACCACCAGGATCAAGCCGGCCACACCCATGCGGATGAGATTCTCCACAGTGTAATCCTGGGGGTGTGAGGCTGGGGATGGTGGACAAAGAGGTCACAGAGGTCAGGGCAGATCAGTATCACCCAGGACCCCTAGATGACC-CCCAGGGCACCCACATCATC-----TTAACAGGACCTGACCCTCTGTG-CCAGTTCCATAACTGAGAGCATCTCCT--CACTCACCAGTCCCAGAgtcagacttgttttgtgacgGACTGAGGTTATCAGCTGCTCCTGAAAATCAAaacag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47011948 373 + 50890351 GGTGCATTGTCCTCTCTTCTGTTCATCTCCCAGCTGCATCCTGGGGGCTTCTCTGGCTGTGCCAATCCTGAAATATCAGAATCCCAAGGACCACCAGGATCAAGCCGGCCACGCCCATGCGGATGAGATTCTCCACAGTGTAATCCTGGGGGTGTGAGGCTGGGGATGGTGGACAAAGACGTCACAGAGGTCAGGGCAGATCAGTATCACCCAGGACCCCTAGATGACC-CCCAGGGCACCCACATCATC-----TTAACAGGACCTGACCCTCTGTG-CCAGTTCCATAACTGAGAGCATCTCCT--CACTCACCAGTCCCAGAGTCAGACTTGTTTTGTGACGGACTGAGGTTATCAGCTGCTCCTGAAAATCAAAACAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45558577 375 + 49145316 CGTGCACTG---TCTCTGCTGTTCACCTCCTGGCTGCATCTTGGGGGTTTCTCTGCCTGTGCTGAGCCTCAAATAGCAGAATCCCGAGGACCACAAGGATGAAGCCAGCCACGCCTATGCGGATGAGATTCTCCACTGTGTAATCCTGGAGGTGTGAGGCTGGGGATGGTAGACAAAGAGGCCACAGAGGTCAGGGCAGATCACAATTACCTAGGACCCCTGGATGTCCACCCAGGGCACCCACCACCTCCCC--TTGACAGGACCTGACCCTCTGTGCCCAGCCCCATAACTGAAAGCATCTCCT--CACTCACCAGTCTTGGAATCTGACTTTTTTTGTGGTGGGTTGAGGGTCTCAGCTGCTCCTAAGAATCAAAGAAC i calJac3.chr22 I 2 C 0 s canFam3.chr1 19726840 369 - 122678785 GTTGCGTTGTTCACTCTTGTGTTTACCTGCTGGCTGCATCTTGGGTTCTTCTCTGACTGTACCAGGACTCAAAGAGGAGAATCCCGAGGACCACCAGCATCACAGTAGCCATGCCCATTCGGATGAGATTCTCCACTGTGTAATCCTTGGGGTCAGAGGCTAAGGATGA-GGACAGAAAGATCACAGAAGTCAGGGCAGACTCAAATCATTTGGGA-TCTTGGATGTCCACCCAGGGTACCTGCCTCCCC-----TTGACAGGACTTCACCCTCCACA-CCAGCCCTAAAACTGAG----TTTTCTGCTAGTTACCACTGCTGGGATCTGACTTCGTTTGTGATGAGTTGATGTTGTCAGATGCTTCTGAGAATCATAAAA- i canFam3.chr1 C 0 C 0 a score=60418.000000 s hg38.chr19_GL949747v2_alt 289116 37 + 729520 GGGAAGGGGAAGGAGAAGTTCTTGAAGCAATCTGAGC s panTro4.chr19 59245703 37 + 63644993 GGGAAGGGGAAGGAGAAGTTCTTGAAGCAATCTGAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56096019 37 + 60714840 GGGAATGGGAAGGAGAAGTTCTTGAAGAGATCTGGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102856217 37 - 106955855 GGGAAGGGGAAGGAGAAGTTCTTGAAGAGATCTGGGC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55212828 37 + 59248254 GGGAAGGGGAAGGAGAAGTTCTTGAAGAGATCTCAGC i macFas5.chr19 I 6 C 0 s papAnu2.chr19 47320529 37 + 51301725 gggaaggggaagaagaagttCTTGAAGAGATCTCAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47012321 37 + 50890351 GGGAAGGGGAAGGAGAAGTTCTTGAAGAGACCTGAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45558952 24 + 49145316 AAGGATGTTGGTGAGAAG---CTGAAG---------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19727209 31 - 122678785 -CCATGAGGAAAAATGAGGTCCTGATGAGACT----- i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60087541 17 + 64156825 I a score=894015.000000 s hg38.chr19_GL949747v2_alt 289153 365 + 729520 CCAGCCTCTCCCCTGAGCTCTGCATTCTCCTAGTTCCCTGTGCCTCTCA--ACATGACTTTTATGGAGTTCCTCCATAAACCCTCCCTCTGCTGGAGCAGGGTTCCCTCCAGTCTCCTCACTGAATTATTTCAGCTTTCCTTTGTTCTTTGAATTTAAACTTTGCTCCTGAGTCATTTGGGAAAGAGCTTTCCTGCACCGTGAAAGCTCAGGATCTGCAAGGAAAGTGGCCCCC------AGAAGTCACTGAGCCCTT-TGTGCT-CTC-----TGTGCAGCCTGGGAC-ACAGGAGCACATAAGCCAATTCCCCCAGAGATGAGAGTTTCACGGATCCACCAGCTGAGGACCCAGGCTCCATGGATGACGGGTTGGTCCT s panTro4.chr19 59245740 365 + 63644993 CCAGCCTCTCCCCTGCGCTCTGCATTCTCCTAGTTCCCTGTGCCTCTCA--ACATGACTTTTATGGAGTTTCTCCATAAACCCTCCCTCTGCTGGAGCAGGGTTCCCTCCAGTCTCCTCACTGAATTATTTCAGCTTTCCTTTGTTCTTTGAATTTAAACTTTGCTCCTGAGTCATTTGGGAAAGAGCTTTCCTGCACCGTGAAAGCTCAGGATCTGCAAGGAAAGTGGCCCCC------AGAAGTCACTGAGCCCTT-TGTGCT-CTC-----TGTGCAGCCTGGGAC-ACAGGAGCACATAAGCCAATTCCGCCAGAGATGAGAGTTTCACGGATCCACCAGCTGAGGACCCAGGCTCCATGGATGATGGGTTGGTCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56096056 366 + 60714840 CCAGCCTCTCCCCTGCGCTCTGCATTCTCCTAGTTCCCTATGCCTCTCA--ACGTGACTTTTATGGAGTTCCTCCATAAACCATCCCTCTGCTGGAGCAGGGTTCCCTCCAGTCTCCTCACTGAATTATTTCAGCTTTCCTTTGTTCTTTGAATTTAAACTTTGCTCCTGAGTCATTTGGGAAAGAGCTTTCCTGCACCATGAAAGCTCAGGATCTGCAAGGAAAGTGGCCCCC------AGAAGTTACTGAGCGCTT-TGTGCTCCTA-----CATGCAGCCTGGGAC-ACAGGAGCACATAAGCCAATTCCCCCAGAGACGAGAGTTTCACGGATCCACCAGCTGAGGACCCAGGCTCCATGGAGGAGGGGTTGGTCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102856254 366 - 106955855 CCAGCCTCTCCCCTGCGCTCTGCATTCTCCTAGTTCCCTATGCCTCTCA--GCATGACTTTTACGGAATTCCTCCATAAACCCTCTCTCTGCTGGAGCACGGTTCCCTCCAGTCTCCTCACTGAGTTATTTCAGCTTTCCTTTGTTCTTTGAATTTAAACTTTGCTCTTGAGTCATTTGGAAAAGAGCTTTCCTGCACCGTGAAAGCTCAGGATCTGCAAGGAAAGTGGCCCCC------AGAAGTCACTGAGCCCTG-TGTGCTCTTA-----TGTGCAGCCTGGGAC-ACAGGAGCACATAAGCCAATTCCCCCAGAGATGAGAGTTTCACCGATCCACCAGCTGAGGACCCAGGCTCCGTGGATGATGGCTTGGTCCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60087558 367 + 64156825 CCAGCCTCTCCCCTGGGCTCTGTGTTCT--TATTTTTCCAGGCCTCATG--ACGTGGCTTTTACAGAGTTCCTCAATAAATCCTCCCTCTCCTGGAGCAGGGTTCCCTCCAGTCTCCTCATGGAACTAGTTCAGTTTTCCTGTGTTCTATGAATTTAAACATTGCTCCTGAGTCATCTGGGGGAGAGTTTTCTTACATCTCAGGGGCTCAGGATTTGCAACGAAAGTGGTCCCC-AGTATAG-GGTCACTGAGCCCTG-TGTGCT-ATC-----TGTGCAGCCTGGGAC-ACAGGAGCACGTAAGCCGATTCCCCCTGAGATGAGAGTTTCACAGATCCACCAGTGGAGGACCCAGGCTGCGTGGATGAAGGGTTGGTCAT i rheMac3.chr19 I 17 C 0 s macFas5.chr19 55212865 345 + 59248254 CCAGCCTCTCACCTGGGCTCTGCATTCTCCTAGTTCCCTATGCCTCTCG--ACATGACTTCTATGGAGTTCCTCGATAAGCCCTCCCTCTGCTGGAGCAGGGTTCCCTCCAGTCTCCTCACTGAATTATTTCACCTTTCCTTTGTTT--------------TTGCTCCTGAGTCATTTGGGAAAGAGTTTTCCTGCACCGTGAAAGACCAGGATC-----------TGGTCCCC-GGTACAGAGGTCACTGAGCCCTG-GGTGCT-GTC-----TGTGTAGCCTGGGAC-ACGGGAGCACATGAGCCAATTCTCCCGGAGATGAGAGTTTCATGGATCCACCAGCTGAGGACTCAGGCTCCGTGCATGAGGGGTGGGTCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47320566 356 + 51301725 CCAGCCTCTCCCCTGGGCTCTGCATTCTCCTAGTTCCCTATGCCTCTCG--ACATGACTTCTATGGAGTTCCTCGATAAGCCCTCCCGCTGCTGGAGCAGGGTTCCCTCCAGTCTCCTCACTGAATTATTTcacctttcctttgttt--------------ttgctCCTGAGTCATTTGGGAAAGAGTTTTCCTGCACCGTGAAAGACCAGGATCTGCAAGGAAAGTGGTCCCC-AGTACAGAGGTCACTGAGCCCTG-GGTGCT-GTC-----GGTGCAGCCTGGGAC-ACGGGAGCACAGGAGCCAATTCCCCCGGAGATGAGAGTTTCACGGATCCACCAGCTGAGGACCCAGGCTCCGTGCATGAGGGGTGGGTCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47012358 356 + 50890351 CCAGCCTCTCCCCTGGGCTCTGCATTCTCCTAGTTCCCTATGCCTCTCA--ATATGACTTTTATGGAGTTCCTCGATAAGCCCTCCCTCTGCTGCAACAGGGTTCCCTCCAGTCTCCTCACTGAATTATTTCACCTTTCCTTTGTTT--------------TTGCTCCTGAGTCATTTGGGAAAGAGTTTTCCGGCACCGTGAAAGATCAGGATCTGCAAGGAAAGTGGTCCCC-GGTACAGAGGTCACTGAGCCCTG-GGTGCT-GTC-----GGTGCAGCCTGGGAC-ACGGGAGCACATGAGCCAATTCCCCCGGAGATGAGAGTTTCACGGATCCACCAGCTGAGGACTCAGGCTCCGTGCATGAGGGGTGGGTCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45558976 368 + 49145316 --AGCCTCTCCCCTGGGTTCTGCATTCTTACATTCCTCTGTCTCTTGTG--TCGTGACTT-TATGTAGATCCTTAGTGAACACAATCTCTGCTCTAGCAGGCCTTCCCTCG--TACCTCATTGGGTT-CTTCAGCCTCTCTGTGCTCTGGGAATTCAGATCTTGTGTCTGAGTCACTTTGGAATAAAGTTTACTTGAGCCCAAGAGCTCAAGATTAGTGAGAAGAATGATCTCC-CAACTAGAAAGAATTGAGCTCTTAAGTGCT-GTCTTAGATGTGTAATCTTGTGCAACAGGAACAC---AACAAATTCCCCCAGAGATAGAAGTTTCCATTTTTCAGTGGATGAGGACCCAGGCTCCGTGGACAAGGAGCTGGTCCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19727240 351 - 122678785 CAAATTTGTCCCCTG-ATTGAGTGTTCTTGTACCTTCCTGCATTTCTCATGATATAACTT-TATAGA---CTGTAATGAACCCTTTCTCTGCTATAGAAATATGCCTC----TGTTCTCATTGGATTCTTTCAGTCTCCCAGTGTTTTGTGAATTCAGACTTTGCTTCTGAGTCCCTTTG----GACTCTTCCTGCATCCCT-TAGCTCAGAATTTAGTGGTACAATCATCTCTCAGTACAGAAGTATTTGGGCTCTTCTATTCT-CTG-----TGTTCATTCT----------GAGCATGAAAGCTACTTCCTTTTGATAGGAGACCTTGTATTTTTCAACACTTTAGGATCCAGTGTCCATGGATAAGGGGTTGGTCTT i canFam3.chr1 C 0 I 2281 a score=73637.000000 s hg38.chr19_GL949747v2_alt 289518 29 + 729520 CAGGGGCTCCTGAAAGTCAGAATCACAAA------------ s panTro4.chr19 59246105 29 + 63644993 CAGGGGCTCCTGAATGTCAGAATCACAAA------------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56096422 29 + 60714840 CAGGGGCTCCTGAATGTCAGAAGCACAAA------------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102856620 29 - 106955855 CAGGGGCTCCTGAATGTCAGAATCACAAA------------ i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60087925 29 + 64156825 CAGGAGCTCCTGAATGTCAGGAGCACAAA------------ i rheMac3.chr19 C 0 I 48240 s macFas5.chr19 55213210 29 + 59248254 CAGGGGCTCCTGAATGTCAGAAACACAAA------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47320922 29 + 51301725 CAGGGGCTCCTGAATGTCAGAAACACAAA------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47012714 29 + 50890351 CAGGGGCTTCTGAATGTCAGAAACACAAA------------ i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45559344 41 + 49145316 CAGCTGCTCTTGAAAGTCAGGAGCAGGAGGGCTGAGGGCTG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19727591 2281 - 122678785 I a score=247149.000000 s hg38.chr19_GL949747v2_alt 289547 173 + 729520 CAGCTGCCTCCCCTTGACGCCACCTCAACCACCTCACCTGGTGTTTCATCATACAATAAGTCTCTAGTCAGCTAACTATTCATATAGTCAGTCA-TATATATATACGTATGTATATAAA---------------tgtgtgtgtgtgtgtgtgtgtgtatatatatgtatatataaatatatatatatat s panTro4.chr19 59246134 137 + 63644993 CAGCTGCCTCCCCTTCACGCCACCTCAACCACCTCACCAAGTGTTTCATCATACAATAAGTCTCTAGTCAGCTAACTATTCATATAGTCAGTCa-tatatatatatgtatgtatataaa---------------tgtgtgtgtgtgtgtgtgt------------------------------------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56096451 135 + 60714840 CAGCTGCCTCCCCTTCATGCCACCTCAACCACCTCACCTGGTGTTTCATCATACAGTAAGTCTCTAGTCAGCTAATTATTCATATAGTCAGTCA-TATAGATAT--GTATGTATATAAg---------------tgtgtgtgtgtgtgtgtgt------------------------------------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102856649 135 - 106955855 CAGCTGcctccccttcacgccacctcaaccacctcacctGGTGTTTCATCATACAATAAGTCTCTAGTTAGCCAATTATTCATATAGTCAGTCA-TATAGATAT--GTATGTATATAAA---------------tgtgtgtgtgtgtgtgtgt------------------------------------ i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55213239 150 + 59248254 CAGCTGcctccccttcacgccacctcaaccacctcacctGGTGTTTCATCATACAATAAGTATCTAGTTAGCTGATTATTCATGTAGTCAGTCa-tatatatat--gtatgtatataaatgtgtgtggggtgtgtgtgtgtgtgtgtgtgtgt------------------------------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47320951 133 + 51301725 CAGCTGCCTCCCCTTCACGCCACCTCAACCACCTCACCTGGTGTTTCATCGTACAATAAGTCTCTAGTTAGCTGATTATTCATGTAGTcagtca-tatatatat--gtatgtatataaa-----------------tgtgtgtgtgtgtgtgt------------------------------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47012743 135 + 50890351 CAGCTGcctccccttcacgccacctcaaccacctcacctGGTGTTTCATCGTACAATAAGTCTCTAGTTAGCTGATTATTCATGTAGTCAGTCa-tatatatat--gtatgtatataaa---------------tgtgtgtgggtgtatgtgt------------------------------------ i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45559385 128 + 49145316 CCACTGCCTCTGCTTCGTGCTGCCTCAGCCAGCTCCCCTGGGGTTTCCTTAACCATTTAATGTCTCGTTAACTGACTCTTCATATAGTTAAGAACTATCTACA---ATGTG-ATATAAA---------------TACAAAAATGTAT------------------------------------------ i calJac3.chr22 C 0 I 31 e canFam3.chr1 19727591 2281 - 122678785 I e rheMac3.chr19 60087954 48240 + 64156825 I a score=32808.000000 s hg38.chr19_GL949747v2_alt 289720 52 + 729520 atatatatatatatatatatatatatatatatatGGTGTTA-CAGAGGCTCAT s panTro4.chr19 59246271 36 + 63644993 ----------------atatatatatatatatatGGTGTTA-CAGAGGCTCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56096586 26 + 60714840 --------------------------gtgtgtatgGTGTTA-CAGAGGCTCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102856784 51 - 106955855 --gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtATGGTGTTATCAGAGGCTCAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55213389 36 + 59248254 ----------------gtgtgtatatatatatatGACGTTATCAGAGGC-CAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47321084 36 + 51301725 ----------------gtgtgtgtgtgtatatatgacgTTATCAGAGGC-CAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47012878 36 + 50890351 ----------------gtgtgtgtgtgtATATATGATGTTATCAGAGGC-CAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19727591 2281 - 122678785 I e calJac3.chr22 45559513 31 + 49145316 I e rheMac3.chr19 60087954 48240 + 64156825 I a score=901291.000000 s hg38.chr19_GL949747v2_alt 289772 466 + 729520 AAAACA--ATTTCTGCTTTT------------------------------------------------------AGggccaggcgtggtggctcatgcctgtaatcccagcactttgggaggccaaggcgggcagatcac--gaggttaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaata-aaaaaatgagccgggcatggtggcacctgcctgtaatcccagctacttgggaggctgagacaggagaatcacttgaacctgggaggcagaggttgcagtgagcccaggtcatgccattgcactccagcttgggcaac-agggcaagagactccatctcaaac----------------aaacaaacaaaaaTTTCTGCTTTTATAAAGTGTGAGTCTAGGTGAGAAGACCAATAACAAACATGTAAAAGCCCTCCATGTCAAATACATTAAGCATGTAGATATACGTATAAAAAATATATGCAGATATACCTACACTT-ATATTCAGATG------------------TAACTTATA s panTro4.chr19 59246307 482 + 63644993 AAAACA--ATTTCTGCTTTT------------------------------------------------------AGggccaggcgtgatggctcatgcctgtaatcccagcactttgggaggccaaggcgggcagatcac--gaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaata-aaaaaatgagccgggcatggtggcacctgcctgtaatcccagctacttgggaggctgagacaggagaatcacttgaacctgggaggcagaggttgcagtgagcccaggtcgtgccattgcactccagcttgggcgac-agggcaagagactccatctcaaactaacaaacaaacaaaccaacaaacaaaAATTTCTGCTTTTATAAGGTGTGAATCTAGGTGAGAAGACCAATAACAAACATGTAAAAGCCCTCCATGTCAAATACATTAAGCatgtagatatacatataaaaaatatatgcagatatacctacactt-atattcagatg------------------taacttata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56096612 476 + 60714840 AAAACA--ATTTCTGCTTTT------------------------------------------------------AGggccaggcgtggtggctcatgcctgtaatcccagcactttgggaggccaaggcaggcagatcac--gaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaata-aaaaaatgagctgggcatggtggcacctgcctgtaatcccagctacttgggaggctgagacaggagaatcgcttgaacctaggaggcagaggttgcagtgagcccaggtaatgacattgcactccagcttgggcaac-agggcaagagactccatctcaaac----aaacaaacaaacaaacaaacaaaAATTTCTGCTTTTATAAAGTGTGAATCTAGGTGAGAAGACCAATAACAAACATGTAAAAGCCCTCCATGTCAAatatattaagcatgtagatatacatataaaaaatatatgcagatatacctacagtt-atattcagacg------------------taac--ata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102856835 474 - 106955855 AAAACA--ATTTCTGCTTTT------------------------------------------------------AGggccaggcgtggtggctcatgcctgtaatcccagcactttgggaggccaaggcgggcagatcac--gaggtcaggagttcgagaccagcctggccaacgtggtgaaaccccgtctctactaaaaata-aaaaaatgagccaggcatggtggtgcctgcctgtaatcccagctacttgggaggctgagacaggagaatcgcttgaacctgggaggcagaggttgtagtgagcccaggtcgtgccattgcactccagcttgggcgac-agggtgagagactccatctcaaac--------aaacaaacaaacaaacaaaaaTTTCTGCTTTAATAAAGTGTGAATCTAGGTGAGAAGACCAATAACAAACACGTAAAAGCCCGCCATGTCAAATACATTAAGCATGTAGATATACATGTAAAAAATATATGCAGATATCCCTACACTT-ATATTCAGATG------------------TAACTTATA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55213425 463 + 59248254 AAAACA--ATTTCTGCTTTT------------------------------------------------------AGggctaggcacggtggctcatgcctgtaattccagcactttggg------aggagggcagatcac--gaggtcaggagttcgagaccagcctggccaacgtggtgaaaccctgtctctactaaagataaaaaaaattagttgggcgtggtggtacatgcttataatcccagctactcgggcgtctgaaacaggagaatcgcttgaaactgggaggcggaggttgcagtgagcccaggtcgtgccactgcactccagcttgggcgac-agggca--agattccgtctcaaac------------aaacaaacaaaaaacaaTTTCTGATTTTATAAAGTGCAAATCTAAGTGAGAAGACCAATAACAAACGTGTAAAAGCCCGTGATGTGAAATACATTAAGCATGTAGATATACATATAAAAAACATATGCAGATATACCTACACTT-ATATTCAGATG------------------TAACTTATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47321120 463 + 51301725 AAAACA--ATTTCTGCTTTt------------------------------------------------------agggctaggcacggtggctcatgcctgtaattccagcactttggg------aggagggcagatcac--gaggtcaggagttcgagaccagcctgaccaatgtggtgaaaccctgtctctactaaagacacaaaaaattagttgggcgtggtggtacatgcttataatcccagctactcgggcgtctgaaacaggagaatcgcttgaaactgggaggcagaggttgcagtgagcccaggtcgtgccgctgcactccagcttgggcgac-agggca--agattccgtctcaaac------------aaacaaacaaaaaacaatttctgattttataaagTGCAAATCTAAGTGAGAAGACCAATAACAAATGTGTAAAAGCCCGTGATGTGAAATACATTAAGCATgtagatatacatataaaaaatatatgcagaTATACCTACACTT-ATATTCAGATG------------------TAACTTATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47012914 463 + 50890351 AAAACA--ATTTCTGCTTTT------------------------------------------------------AGggctaggcatggtggctcatgcctgtaattccagcactttggg------aggagggcagatcac--gaggtcaggagttcgagaccagcctggccaacgtggtgaaaccctgtctctactaaagatacaaaaaattagttgggcgtggtggtacatgcttataatcccagctactcgggcgtctgaaacaggagaatcgcttgaaactgggaggcggaggttgcagtgagccgaggtcgtgccactgcactccagcttgggcgac-agggca--agattccgtctcaaac------------aaacaaacaaaaaacaaTTTCTGCTTTTATAAAGTGCAAATCTGCGTGAGGAGACCAATAACAAACATGTAAAAGCCCGCGATGTGAAATACATTAAGCatgtagatatacatataaaaaatatatgcagatatacctacactt-atattcagatg------------------taacttata i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45559544 515 + 49145316 AAAACATCATTTCTGCTTTTTTGAAGTATGAACCTAGATTGGAAGGTGAAAAGCAAATATTTAAAAACATACCCAAggctgggtgtggtggctcacacctgtcatcctagtactttgggcagctgaggcaagcagattacctgaggtcaggaactcaagaccagccttacc-atatggagaaaccccatctctactaaaaat--acaaaattaacc-ggcatgatggagcatgcctgtaatcccagctacttgggaggctgagtcaggagaatcacttgaatctgggaggtggaggtttcggtgagccaagatcgtaccactgcactccagcctgggcaacaagagtg--aaacccca--tcaaaa------------aaacaaacaaaaaCCCATACCCGAACTTAAA----GTAAA--------ATAAAAACAATATCAAAA----AAACATACCCGATG-AAAAAATATTAAGCATAGGAATGAATG------AAATAT---TAAGTATTCCTATGCTTAATACTTATGTGTGTGTCTGTGTAGGTTCATAACACATA i calJac3.chr22 I 31 C 0 e canFam3.chr1 19727591 2281 - 122678785 I e rheMac3.chr19 60087954 48240 + 64156825 I a score=44641.000000 s hg38.chr19_GL949747v2_alt 290238 19 + 729520 TAACCATACATAAATATGT s panTro4.chr19 59246789 19 + 63644993 taaccatacataaatatgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56097088 19 + 60714840 taaccatacataaatatgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102857309 19 - 106955855 TAACCATACATAAATATGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55213888 19 + 59248254 TAACCATACATAAGTATGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47321583 19 + 51301725 TAACCATAcataagtatgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47013377 19 + 50890351 taaccatacataaatatgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45560059 18 + 49145316 TATTCATATA-AAATATGT i calJac3.chr22 C 0 I 1449 s canFam3.chr1 19729872 19 - 122678785 TAACTTAAAATAATTAAGT i canFam3.chr1 I 2281 C 0 e rheMac3.chr19 60087954 48240 + 64156825 I a score=438734.000000 s hg38.chr19_GL949747v2_alt 290257 221 + 729520 -ATATATGTAAAACTTTAGATATTTATTTAAGAT-GCAGTTACATGCATATTAATA-----------------------CTTGAAGTGACAAAAATTGATATGCGGTTTAGAAATAAAAAATAAAATTTCAATTTTCTTATAGTTAATATAAATTTTATCAGTAAATTTGGGGAGATCAGTTGAAAGATAATTGAAAGGGAAAAATGTTATAGCAAGCTAAAATGAAATTAAATGAATATACTCAA s panTro4.chr19 59246808 221 + 63644993 -atatatgtaaaactttagatatttatttaAGAT-GCAGTTACATGCATATTAATA-----------------------CTTGAAGTGACAAAAATTGATATGCGGTTTAGaaataaaaaataaaatttcaattttcttatagttaatataaaCTTTATCAGTAAATTTGGGGAGATCAGTTGAAAGATAATTGAAAGGGAAAAATGTTATAGCAAGCTAAAATGAAATTAAATGAATATACTCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56097107 221 + 60714840 -atatatgtaaaactttagatatttatttaAGAT-GCAGTTACATGCATATTAATA-----------------------CTTGAAGTGACAAAAATTGATATGCAGTTTAGaaataaaaaataaaatttcaattttcttatagttaatataaattttatCAGTAAATTTGGGGAGATCAGTTGAAAGATAATTGAAAGGGAAAAATGTTATAGCAAGCTAAAATGAAATTAAATGAATATACTCAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102857328 221 - 106955855 -ATATATGTAAAACTTTAGATATTTATTTAAGAT-GCAGTTACATGCATATTAATA-----------------------CTTGAAGTCACAAAAATTGATATGCAGTTTAGAAATAAAAAATAAAATTTCAGTTTTCTTATAGTTAATATAAATTTTATCAGTAAATTTGGGGAGATCAATGGAAAGATAATTGAAAAGGAAAAATGTTATAGCAAGCTAAACAGAAATTAAATGAATATACTCAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55213907 221 + 59248254 -ATATATGTTAAACTTTAGATATTTATTTAAGAT-GCAATTACATGCATATTAATA-----------------------CTTGAAGTGACAAAAATTGATATGCAGTTTAGAAATAAAAAATAAATTTTCAATTTTCTTATAGTTAATATACATTTTATCAGTAAATTTGGGGAGATCAGTTGAAAGATAATGGAAAGGGAAAAATGTCATAGCAAGCTAATATGAAATTAAATGAATATACTCAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47321602 221 + 51301725 -atatatgttaaacTTTAGATACTTATTTAAGAT-GCAATTACATGCATATTAATA-----------------------CTTGAAGTGACAAAAATTGATATGcagtttagaaataaaaaataaattttcaattttcttatagttaatataaattttatcagTAAATTTGGGGAGATCAGTTGAAAGATAATGGAAAGGGAAAAATGTCATAGCAAGCTAAtatgaaattaaatgaatataCTCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47013396 217 + 50890351 -atatatgttaaactttagatatttatttaAGAT-GCAATTACATGCATATTAATA-----------------------CTTGAAGGGACAAAAATTGATATGCAGTTTAGAAATAAAAAATAAATTTTCAATTTTCTTATAGTTAATATAAATTTTATCAGTAAATTTGGGGAGATCAGTTGAAAGATAATGGAAAGGGAAAA----TATAGCAAGCTAATATGAAATTAAATGAATATACTCAA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19729891 244 - 122678785 AATTTGGGTATCACTTTAGATGTTTTCTTAAAACAACACTTAGCTTTGTGTTAACATCTTGTCATTATTATATATATTTTTTGCCTTAAATAAGACTAGTGCATAATCTAGAAATAAACAGGTAAGTTTCAATGTTTTTGCAGTTGATATAATGATTATCAGTAAATTAAAGGAGATCAGTTGCAAAGCAATGGGAAGGTGGAGAATCAAAACTAAGTTAATA--GAATAAAATGAATATAACTGg i canFam3.chr1 C 0 I 577 e calJac3.chr22 45560077 1449 + 49145316 I e rheMac3.chr19 60087954 48240 + 64156825 I a score=315727.000000 s hg38.chr19_GL949747v2_alt 290478 180 + 729520 ACTAAAAGCTTTCTCATGTGTATATCTTACTTAGAAATATAAATGAATCAggctgggcatggtggctcacgcctgtaatcccagcactttgggaggcctaggtgggtggatcacgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatacaaaa s panTro4.chr19 59247029 180 + 63644993 ACTAAAAGCTTTCTCATGTGTATATCTTACTTAGAAATATAAATGAATCAggctgggcacggtggctcacgcctgtaatcccagcactttgggaggcctaggtgggtggatcacgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatacaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56097328 180 + 60714840 ACTAAAAGCTTTCTCATGTGTATATCTTACTTAGAAATATAAATGAATCAggctgggcacagtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtggatcacgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatacaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102857549 179 - 106955855 ACTAAAAGCTTTCTCACGTGTATATCTTACTTAGAAATATAAATGAATCAggctggg-acggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtggatcacgaggtcaggagatcgagaccatcctggctaacacagtgaaaccctgtctctactaaaaatacaaga i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55214128 174 + 59248254 ACTAAAAGCTTTCTCATGTGTATATCTTACTTAGAAATATAAATTAATCAggctgggcacggtggctcacacctgtaatcccagcactttgggaggctgaggcgggtggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccctgtctctactgaaaat------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47321823 174 + 51301725 ACTAAAAGCTTTCTCATGTGTATATCTtacttagaaatataaattaatcaggctgggcatggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggtggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccctgtctctacttaaaat------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47013613 178 + 50890351 ACTAAAAGCTTTCTCATGTGTATATCTCACTTAGAAATATAAATGAATC-ggccgggcgcggtggctcaagcctgtaatcccagcactttgggaggccgagatgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccatctctactaaaaacacaa-a i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19730135 577 - 122678785 I e calJac3.chr22 45560077 1449 + 49145316 I e rheMac3.chr19 60087954 48240 + 64156825 I a score=566316.000000 s hg38.chr19_GL949747v2_alt 290658 321 + 729520 aaattagcccggcatggtggtgggtgcctgtagtcccagctactcgggaggctgaggcaggacaatggcgtgaacccaggaggcggagcttgcagtgagccgagatcgcgccactgcactccaggctgggcgacagagcaagactccatctcaaaaacaaaaacaaacaaacaaac-aaaaGAAATATACATGAATCAAATACTTCACTTAAGAATAA----AGTAGTTGAAGAATTTTTTAAATTAGACTAAATGTACACATTCTTATGAACGGAACTTGAAAACACTTATTAACTTCATTAATAAACTTCAATTTTATATATTA s panTro4.chr19 59247209 323 + 63644993 aaattagccgggcatggtggtgggtgcctgtagtcccagctactcgg-aggctgaggcaggagaatggcgtgaacccaggaggcggagcttgcagtgagccgagatcacgccactgcactccaggctgggcgacagagcaagactccatctcaaaaacaaaaacaaacaaataaac-aaaaGAAATATACATGAATCAAATACTTCACTTAAGAATAATTAAAGTAGTTGAATAATTTTTTAAATTAGACTAAATGTACACATTCTTGTGAACGGAACTTGAAAACACttattaa-ttcattaataaacttcaattttatatatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56097508 325 + 60714840 aaattagccgggcatggtggcgggcgcctgtagtcccagctattcgggaggctgaggcaggacaatggcgtgaacccaggaggcggagcttgcagtgagccgagatcgcgccactgcactccaggctgggcgacagagcaagactccatctcaaaaacaaaaacaaacaaacaaaa-aaaaGAAATATACATGAATCAAATACTTCACTTAAAAATAATTAAAGTAATTGAAGAATTATTTAAATTAGACTAAATGTACACATTCTTATGAACGGAACTTGAAAACACTTATTAACTTCATTAATAAACTTCAATTTTATATATTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102857728 326 - 106955855 aaattagccaggcatggtggtgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaacccaggaggcggagcttgcagtgagccgagatcgcaccactgcactccaggctgggcgacagagcaagactccatctcaaaaataaaaacaaacaaacaaacaaaaaGAAATATAAATGAATCAAATACTTCACTTAAAAATAATTAAAGTAGTTGAAGAATTATTTAAATTAGACTAAATGTACACATTCTTATGAACGGAACTTGAAAACACTTATTAACTTCATTAATAAACTTCAATTTTATATATTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55214302 304 + 59248254 --actagccaggcatggtggcgggcacctgtagtcccagctacttgggaggctgaggcaggagaatggggtgaacccgggaagcagagcttgcaatgagctgagactgcaccactgcactccagcctgggtgacagagcaagactccatctc-----aaaaaaaaaa----------aaaagaaatataaaTGAATCAAATATTTCACTTAAAAATAATTAAAGTAGTTGAAGAATTCT-----TTAGACTAAATGTACACATTCTTATGAACAGAACTTCAAAACACTTATTAACTTCATTCATAAACTTCAATTTTATATATTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47321997 309 + 51301725 --actagccaggcatggtggcgggcacctgtagtcccagctacttgggaggctgaggcaggagaatggggtgaacccaggaagcagagcttgcaatgagctgagactgcaccactgcactccagcctgggtgacagagcaagactccatctcaaaaaaaaaaaaaaa----------aaaagaaatataaatgaatcaaatatttcacttaaaaataattaaagtagtTGAAGAATTCT-----TTAGACTAAATGTACCCATTCTTATGAACAGAACTTCAAAACACTTATTAACTTCATTCATAAActtcaattttatatatta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47013791 311 + 50890351 aaactagccgggcgaagtggcgggcgcctgtagtcccagctacttgggaggctgaggtaggagaatggggtgaacccaggaggcagaacttgcaatgagctgagattgcaccacggcactccagcctgggtgacagagcaagactccatctcaaaaaaaaaaaaaga----------aaaagaaaTATAAATGAATCAAATATTTCACTTAAAAATAATTAAAGTAGTTGAAGAATTCT-----TTAGACTAAATGTACACATTCTTATGAACAGAACTTCAAAACACTTATTAACTTCATTCATAAACTTCAATTTTATATATTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45561526 223 + 49145316 AAATTAgccagatgtggtggtgcacacctgcaattccagctactagggaaactgaggcaggaggattgcttgagcccaggagttttaggttgcagtgagctatgatcctgctactgtggttcagcctgggcaacagagtgagaccccatctctaaaaataaaataaa---------------------------aTCAAG---ttaaattataaa-----------------------------ttaaaataaaaataGAAGTGCT---------------AAAGGATTTA-----------------------------ATGTTA i calJac3.chr22 I 1449 C 0 e canFam3.chr1 19730135 577 - 122678785 I e rheMac3.chr19 60087954 48240 + 64156825 I a score=132091.000000 s hg38.chr19_GL949747v2_alt 290979 81 + 729520 ATAATAGAAAT-ACTTG-CTATTAACAACTAATTTTATACAGCAAATGTAAATATTGAATTATG-CCCCCAGGACAATGGGAGT s panTro4.chr19 59247532 83 + 63644993 ataatagaaat-atttGGCTATTAACAACTAATTTTATACAGCAAATGTAAATATTTAATTATGGCCCCCAGGACAATGGGAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56097833 81 + 60714840 ATAATAGAAAT-ACTTG-CTATTAACAACTAATTTTATACAGCAAATGTAAATATTGAATTATG-ACCCCAGGACAATGGGAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102858054 81 - 106955855 ATAATAGAAAT-ACTTG-CTATTAACAACTAATTTTATACAGCAAATGTAAATATTGAATTATG-CCCCCAGGACAATGGGAGT i nomLeu3.chr10 C 0 I 481 s macFas5.chr19 55214606 80 + 59248254 ATAATAGAAAT-ACTTG-TCGTTAACAACTAATTTTATAAAGCAAATGTAAATATTGAATTACA--CCCCACAACAATGGGAGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47322306 80 + 51301725 ataatagaaat-acTTG-TCGTTAGCAACTAATTTTATAAAGCAAATGTAAATATTGAATTACA--CCCCACGACAATGGGAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47014102 80 + 50890351 ATAATAGAAAT-ACTTG-CCGTTAACAACTAATTTTATAAAGCAAATGTAAATATTGAATGACA--CCCCACGACAATGGGAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45561749 63 + 49145316 ATA--AGAAGTGACTTT-CTATTTA---------------AATGAATGCATACATTTAAT-GTA-TCTCAATAAAAATTGGAG- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19730712 79 - 122678785 gccAGAAAAAC-ACTTT-ATAATCACAAATTATTCTCTATAAAGGATATATGCATTTCAT-ATA-AACCCAATGAAATTGGAG- i canFam3.chr1 I 577 C 0 e rheMac3.chr19 60087954 48240 + 64156825 I a score=299488.000000 s hg38.chr19_GL949747v2_alt 291060 143 + 729520 GGAATTACTTGTTTTTAAA-TCATAAATCCATATATCTTAAAGAGACAAATTTAAATA-TTCAAATATTGTTTTAAAAGAT-TCAGAAGAAGAGAGA------AAAAATAAACAAGTATGCCCAGAAAATGCAGAGCAGCAATGAACAGCAG s panTro4.chr19 59247615 144 + 63644993 GGAATTACTTGTTTTTAAAATCATAAATCCATATATCTTAAAGAGACAAATTTAAATA-TTCAAATATTGTTTTAAAAGAT-TCAGAAGAAGAGAGA------AAAAATAGACAAGTATGCCCAGAAAATGCAGAGCAGCAATGAACAGCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56097914 143 + 60714840 GGAATTACTCATTTTTAAA-TCATAAATCCATATATCTTAAAGAGACAAATTTAAATA-TTCAAATATTGTTTTAAAAGAT-TCAGAAGAACAGAGA------AAAAATAGACAAGTATGCCCAGAAAATGCAGAGTAGCAATGAACAGCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102858616 143 - 106955855 GGAATTACTTGTTTTTAAA-TCATAAATCCATATATCTTAAAGAGACAAATTTAAATA-TTCAAATATTGTTTTAAAAGAT-TCAGAAGAAGAGAGA------AAAAATAGACAAGTATGCCCAGAAAATGCAGAGCAGCAATGACCAGCAG i nomLeu3.chr10 I 481 C 0 s macFas5.chr19 55214686 143 + 59248254 GGAATTACTGGTTTTTAAA-TCATAAATCCACATATCTTAAAGAGACAAATTTAAATA-TTCAAATATTGTTTTAAAAGAT-TCAGAGGAAGAGAGA------GAAAATAGACAAGCATGCCCAGCAAATGCAGAGTAGCAATGAACAGCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47322386 143 + 51301725 GGAATTACTGGTTTTTAAA-TCATAAATCCACATATCTTAAAGAGACAAATTTAAATA-ctcaaatattgttttaaaagat-tcagaagaagagaga------gaaaatagacaaGCATGCCCAGCAAATGCAGAGTAGCAATGAACAGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47014182 143 + 50890351 GGAATTACTGGTTTTTAAA-TCATAAATCCACATATCTTAAAGAGACAAATTTAAATA-TTCAAATATTGCTTTAAAAGAT-TCAGAAGAAGAGAGA------GAAAATAGACAAGCATGCCCAGCAAATGCAGAGTAGCAGTGAACCGCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45561812 137 + 49145316 --AATTCCTTATTTTAAAC-TCATATATCCATTTATCTGAAAT---TAAATTGATACACCTTAAGTATGGCTTTTAAAGTT-TCAG--GAAAAGAAT------AGCAATAGACAAATGTGTGCAGAAAACACAGAATAGAAATGAATGACAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19730791 139 - 122678785 ----------ATTTTAAAG-TCCTAAATCCTCATAATGTAAATTTGT-ATTTTGCATC-TGCAAGGCTCACCTCGAACGTTCTGAGAAGCAGTCAGGGTGGTTGACACTGGACAAGTTTCCACACACAATGCAGCGCAGACACGAATTGCAC i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60087954 48240 + 64156825 I a score=1213848.000000 s hg38.chr19_GL949747v2_alt 291203 420 + 729520 ACAAGACGTGCTGTGAATAAGTTCCTAACTTCCTCCAGGGAGC---AGGTGCGCGGCCCCTCCTTTG-TCTCAGGGGTGCCCTGA---GCACAGAGGCCTCCAGGTGAGCACAGGAGGGGCGGTGTGAGTGGTACCCACA-GCTGGGGCGCTTCTCTCTAAAGGAGCAGGTCTGGCGTGGACTCCAGCCTCATCACCGTCAGATCCCACCGAGGCCTGAGCAGCCTCC-TCCCCTGTCCTGAGTGGGCTCAGGGACC-CCGCAGGTGTGGGTGAGGGGCTCCATCCTCAGGGGCTCTTGGAAATGAGAAGTGAGAGCTGCCAAGGGAGCGTC----CGTCTGTCCTCTCTCCAACTCGCCTGCCTCTCTTCCTCCTCCATCAGCCCCAGCATCTTCCCCATGTTCCAAGTCAGGCCTGGACCCCAAATCCTGCT s panTro4.chr19 59247759 420 + 63644993 ACAAGACGTGCTGTGAATAAGTTCCTAACTTCCTCCAGGGAGC---AGGTGCGTGGCCCCTCCTTTG-TCTCAGGGGTGCCCTGA---GCACAGAGGCCTCCAGGTGAGCACAGGAGGGGCCGTGTGAGTGGTACCCACA-GCTGGGGCACTTCTCTCTAAAGGAGCAGGTCTGGCGTGGACTCCAGCTTCATCACAGTCAGATCCCACAGAGGCCTGAGCAGCCTCC-TCCCCTGTCCTGAGTGGGCTCAGGGACC-CCGCAGGTGTGGGTGAAGGGCTCCATCCTCAGGGGCTCTTGGAAATGAGAAGTGAGAGCTGCCAAGGGAGCGTC----CGTCTGTCCTCTCTCCAACTCGCCTGCCTCTCTTCCTCCTCCATCAGCCCCAGCATCTTCCCCATGTTCCAAGTCAGGCCTGGACCCCACATCCTGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56098057 420 + 60714840 ACAAGATGTGCTGTGAATAAGTTCCTAACTTCCTCCAGGGAGC---AGGTGCGCGGCCCCTCCTTTG-TCTCAGGGGTGTCCTGA---GCACAGAGGCCTCCAGGTGAGCACAAGAGGGGCCTTGTGAGTGGCACCCACA-GCAGGGGTGCTTCTCTCTAAAGGAGCAGGTCTGGCGTGGACTCCAGCCTCATCACAGTCAGATCCCACTGAGGCCTGAGCGGCCTCC-TCCCCTGTCCTGAGTGGGCTCAGGGACC-CCGCAGGTGTGGGTGAGGGGCTCCATCCTCAGGTTCTCATGGAAATGAGAAGTGAGAGCTGCCAAGGGAGCGTC----CGTCTGTCCTCTGTCCAACTCGCCTGCCTCTCTTCCTCCTCCATCAGCCCCAGCATCTTCCCCATGTTCCAAGTCAGGCCTGGACCCCAAATCCTGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102858759 416 - 106955855 ACAAGATGTGCTGTGAATAAGTTCCTAATTTCCTCCAGGGAGC---AGGTGCACGGCCCCTCCTCTG-TCTCAGGGGTGCCCTGA---GCAAAGAGGCCTCCAGTTGAGGACAGGAGGGGCCGTGTGAGTGGCACCCACG-GCTGGGGTGCTTCTCTCTAAAGGAGCAGGTCTGGCGTGGACTCCAGCCTCATCA--GTCATATCCCACTGAGGCCTGAGCAGTGTCC-TCCCCTGTCCTGAGTGGGCTCAGGGACC-CCGCAGGTGTGGGTGAGGGGCTCCATCCTCGGG--CTCTTGGAAATGAGAAGTGAGAGTTGCCAAGGGAGCATC----TGTCTGTCCTCTCTCCAACTCGCCTGCCTCTATTCCTCCTCCATCAGCCCCAGCATCTTCCCCATGTTCCAAGTCAGGCCTGGACCCCAAATCCTGCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60136194 414 + 64156825 ACAAGCCGTGCTGTGACTAATTTCCTAACTCA-TCCAGGGAGC---AGGTGCACAGCCCCTCCTTAG-TCTCAGGAGTTCCCTGA---GCACAGAGGCCTCCAGGTGAGCACAGGAGGGACCGTGTGAGCGGCACCCACA-GCTGGGGTGCTTCTCTCTAAAGGAGCAGATCTTTGGTGGACTCCAGCCTCATCACAGTCAGATCCCACCGAGGCCTGAGCAGCCTCC-TTTCCTGTCCTCAGAGGACTCAGGGACC-CTGCAGGTGTGGTTGAGGGG-TTCACCCTCAGGAGCTCTTGGAAATGAGAAATAAGAGCTGCCAAGGGAGCGTC----CGTCTTTC--CTCTCCAACTTGCCTGCCTCTCTTCCTCCTCCATCAGCCCCAGCATCTTCCCCGTG-TCCAAGTCAGG-CTGGACCCCAACTCCTCCT i rheMac3.chr19 I 48240 C 0 s macFas5.chr19 55214829 420 + 59248254 ACAAGATGTGCCGTGAATAAGTTCCTAAGTTACTGCTGGGAGC---AGGTGCACGGCCCCTCCTTCG-TCTCAGGGGTGCCCTGA---GCAAAGAGGCCTCCGGTTGAAGACAGGAGGGGCCATGAGAGTGGCACCCACA-GCTGGGGTGCTTCTCTTTAAAGGAGCAGGTCTGGGGTGGGTTCCACCCTCATCACAGTCAGATCCCACCGAGGCCGGAGCAGCGTCC-TCCCCTGTCCTGAGTGGGCCCAGGGACC-CTGCAGGTGTGGGTGAGGGGCTCCATCTTCAGGATCTCATGGAAACAAGAAGTGAGAGCTGCCAAGGGAGGGTC----CATCTGTCCTCTCTCCAACTTGCCTGCCTCTCTTCCTCCTCCACCAGCCCCAGCATCTTCCCCATGTTCCAAGTCAGGCCTGGACCCCAAATCCTGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47322529 420 + 51301725 ACAAGATGTGCCGTGAATAAGTTCCTAACTTACTGCTGGGAGC---AGGTGCACGGCCCCTCCTTAG-TCTCAGGGGTGCCCTGA---GCAAAGAGGCCTCCGCTTGAAGACAGGAGGGGCCATGAGAGTGGCACCCACA-GCTGGGGTGCCTCTCTTTAAAggagcaggtctggggtgggttCCACCCTCATCACAGTCAGATCCCACCGAGGCCGGAGCAGCGTCC-TCCCCTGTCCTGAGTGGGCCCAGGGACC-CTGCAGGTGTGGGTGAGGGGCTCCATCTTCAGGATCTCATGGAAACAAGAAGTGAGAGCTGCCAAGGGAGCGTC----CATCTGTCCTCTCTCCAACTTgcctgcctctcttcctcctccatcagCCCCAGCATCTTCCCCATGTTCCAAGTCAGGCCTGGACCCCAAATCCTGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47014325 419 + 50890351 ACAAGATGTGCCGTGAATAAGCTCCTAACTTACTGCTGGGAGC---AGGTGCACGGCCCCTCCTTCG-TCTCAGGGGTGCCCTGA---GCAAAGAGGCCTCCGGTTGAAGACAGGAGGGGCCATGAGAGCGGCACCCACA-GCTGGGGTGCTTCTCTCTAAAGGAGCAGGCCTGGGGTGGGTTCCA--CTCATCACAGTCAGACCCCACTGAGGCCGGAGCAGCGTCCTTCCCCTTTCCTGAGTGGGCCCAGGGACC-CCGCAGGTGTGGGTGAGGGGCTCCATCCTCAGGATCTCATGGAAACGACAAGTGAGAGCTGCCAAGGGAGCGTC----CATCTGTCCTCTCTCCAACTTGCCTGCCTCTCTTCCTCCTCCACCAGCCCCAGCATCTTCCCCATATTCCAAGTCAGGCCTGGACCCCAAATCCTGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45561949 401 + 49145316 ACAAGACCTGCTGTGAGCAATTCCCTAACTTA-TCCAAGGAGC---AGGTGCACAGCCCCTCCTTAG-TTTCAGGGGTGCCCTGA---GTCTAGAGGCCATC-------------AGGGGCC---CAAGCAGTACTCAGA-GCTGGGGCGCTCCTCTCTAAAGGAGCACATCTGGAGTGGACTCCACCCTCACCACAGTGAGATCCGACGGAGGCCTGAGCAGCCTCC-CCACCTGTCCTGAGAGGGCCTAGGAACC-CCACAAGTGTGGGTTAGGGGATCCATCCCCAGGGGCTCTTGGAAATTAAAAATGAGAGCTTCCAAGGGAGCATG----CATCTGTCCTCCGTCCAACTTGCCCACATCTCTTCTTCCTCCATCAGCCCCAGCATCTTCCCCTTG-TCCAAGTCAGGCCTGGACCCCAAA-CCTGCT i calJac3.chr22 C 0 T 37928 s canFam3.chr1 19730930 397 - 122678785 AC-AGACACACTGC--ACAGCATCCAAGGGGACTCCTGTGTGCTCTGTCTGTGTGAACCTACCTTTGATGTCAGGTGGGCACTGAGGGGCATGGAGGCCCCGAGGGGAGCACAG--GGGGCTGTG-GAGCGGTGCTCATAGGCAGGGAGGCATCTCTCT--AGGAATGTGTCTGGTAAGGGCTCCACCTGCGCTCTCAGCAAACCCCACCTTGGTCTCAGCAGC-TCC-AGGCCTGATGTGAGAGGGCTCAGAGACCTCCTCAGGTGTGAGTGAGGGGCTCCATACTCAGGGTCT-TTGGAAATTGGGAGGGAATGT-------GGACCATCATTACAACTGTC--------------CCAGACTC---TCCTCCTCCATCATCCC--ATATCCTGCCTGTGCTCTGAGTCAGGCCTGGACACCAAGTGCTGCA i canFam3.chr1 C 0 C 0 a score=606749.000000 s hg38.chr19_GL949747v2_alt 291623 261 + 729520 GACCAGGTCTGTTCTCCTTCCTCTACTCA---TCACTCATCCCGCAGGA--TAGGGTAGGGGCCTGGGAGTCTTGTAAAGCT-------GCA--TGGTTTTTAGTAGAAAATCTG-AAACGCTTCGTGTGACATGTGAGAGA-GAGGAGATTCTAAA-CAGTGGGG-TTTTTACACATCTTTGCTTTCT-CATAATATTGTGGCTTCGTCTCACGAACCTCAGACCCCAGCACTGATGGATATGATTACATGTACCTGCAGCTGCCCCTCTTGGCTTTCT s panTro4.chr19 59248179 261 + 63644993 GACCAGGTCTGTTCTCCTTCCTCTACTCA---TCACTCATCCCGCAGGA--TAGGGTAGGGGCCTGGGAGTCTTGTAAAGCT-------GCA--TGGTTTTTAGTAGAAAATCTG-AAACGCTTCGTGTGATGTGTGAGAGA-GAGGAGATTCTAAA-CAGCGGGG-TTTTTACACATCTTTGCTTTCT-CACAATATTGTGGCTTCGTCTCACGAATCTCAGACCCCAGCACTGATGGATATGATTACATGTACCTGCAGCTGCCCCTCTTGGCTTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56098477 261 + 60714840 GACCAGGTCTGTTCTCCTTCCTCTACTCA---TCACTCATCCCACAGGA--CAGGGTAGGGGCCTGGGAGTCTTGTAAAGCT-------GCA--TGGTTTTTAGTAGAAAATCTG-AAACACTCCGTGTGATGTGTGAGAGA-GGGGAGATTCTAAA-CAGTGGGG-TTTTTACACGTCTTTGCTTTCT-CATAATATTGTGACTTCATCTCACGAATCTCAGACCCCAGCACTGATGGATACGATTACATGTACCTGCAGCTGCCCCTCTTGGCTTTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102859175 259 - 106955855 GACCAGCTCTGTTCTCCTTCTTCTACTCA---TCACTCATCCCGCAGGA--TAGGGTAGGGGCCTGGGAGTCTTGTAGAGCT-------GCA--TGGTTTTTAGTAGAAAATCTG-AAACACTTTGTGTGA--TGTGAGAGA-GGGGAGATTCTAAA-CAGTGGGG-TTTTTACACATCTTTGCTTTCT-CATAATATTGTGGCTTCATCTCACGAATCTCAGACCCCAGCACTGATGGATATGATTCCACGTACCTGCAGCAGCCCCTCTTGGCTTTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60136608 269 + 64156825 GACCCAGCCTGTGCTCCTTCCTCTACTCA---TCACCCATCTTGCAGGA--CAGGGTCGGGGCCTGGGAGTCATGCATAGCTGTGCTGGGTG--TTGCTTTTAGTAGAAAATCTG-AACCACTTTGTGTGATACATGAGAGA-GGGAAGATTCTAAACCAGTGGGG-TTTTTACAAATCTTTGCTTTCT-CCTAATATTGTGGCTTCATCTCACGAATCTCAGACCCCAGCACTGATGGATACAATTACACGTACCTGCGGCTGCCTCTCCTGGCTTTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55215249 262 + 59248254 CACCAGGTCTGTTCTCCTTCCTCTACTCA---TCGCTCATCCTGCAGGA--TAGGGTGGGGGCCTGGGAGTCTTGTAGAGCT-------GCA--TGGTTTTTAGTAGAAAATCTGAAACAACTTCGTGTGATGTGTGAGAGA-GGGGAGATTCTTAA-CAGTGGGGTTTTTTGTAAATCTTT-CTTTCT-CGTAATTTTGTGGCTTCATCTCACAAATCTCAGACCCCAGGATGGATAGATACGATTACATGTACCTGCAGCTGCCCCTCTTGGCTTTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47322949 242 + 51301725 CACCAGGTCTGTTCTCCTTCCTCTACTCA---TCGCTCATCCTGCAGGA--TAGGGTAGGGGCCTGGGAGTCTTGTAGAGCT-------GCA--TGGTTTTTAGTagaaaatctg-aaacactttgTGTGATGTGTGAGAGA-GGGGAGATTCTAAA-cagtggggttttttgt---------------------ttttgtggcttCATCTCACGAATCTCAGACCCCAGGACGGATGGATACGATTACATGTACCTGCAGCTGCCCCTCTTGGCTTTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47014744 261 + 50890351 CACCAGGTCTGTTCTCCTTCCTCTACTCA---TCACTCATCCTGCAGGA--TAGCGTGGGGGCCTGGGAGTCTTGTAGAGCT-------GCA--CGGTTTTTAGTAGAAAATCTG-AAACACTTTGTGTGATGTGTGAGAGA-GGGGAGATTCTAAA-CAGTGGGGTTTTTTGTAAATCTTT-CTTTCT-CATAATTTTGTGGCTTCATCTCACGAATCTCAGACCCCAGGACGGATGGATACGATTACACGTACCTGCAGCTGCCCCTCTTGGCTTTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45524422 222 + 49145316 GACCCAAGCTATTCTCCTTTCTCTTCCCA---TCACACATCCCACAGGA--CCAGGT------CTAGAAG-ATTGGAGAGCT-----------------TTTGTT------TCTG-ACG-----------------GAGAGAGGGGGAGATTCTAAAACAGTGGGG--CTTTGTAAACTTGT-TACTTT-CAAAATACTGTGGCTTTGTCTTACTAAGCTGAGATCCCAGGAGTGATGAGTGAAACCGCGGGCACCTGC-TCCATCTCCGTTGGCTTTTC i calJac3.chr22 T 37928 C 0 s canFam3.chr1 19731327 253 - 122678785 -----AAACTGCCCCTCTTCATC--CTCAATCGCACACGTTCTCCAAAACCTCGCCTAGGAGTTGAGGTGTGCTGACAAGGG-------GCAGGTGGCTTTTAG----AAAATTG-CACGGTTTTGTACGGGATGAGGAGGA-GCTGAGATGATCAATCAGTGGG--CATTTCCTAATCTGTGCTGTCTCCATGCTACTGAGAATACTTCTTGTTCTGCTAAGACCCCCGC-CTGAGGGACCAAATCATATGCATCTGC----GTTTCCCTGGGCTTCtt i canFam3.chr1 C 0 I 1650 a score=99214.000000 s hg38.chr19_GL949747v2_alt 291884 40 + 729520 AACCCTTGCGAGGCATAGCTATTGGCAAGAGCAGACCAGG s panTro4.chr19 59248440 40 + 63644993 AACCCTTGCGAGGCATAGCTATTGGCAAGAGCAGACCAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56098738 40 + 60714840 AGACCTTGCGAGGCATAGCTATTGGCAAGAGCAGACCAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102859434 40 - 106955855 AACCCTTGCGAGGCATAGCTATTGGCAAGAGCGGACCAGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60136877 40 + 64156825 AACCCTTGCAACACATAGTTATTGGTAGAAGCCGACCAGG i rheMac3.chr19 C 0 T 27251 s macFas5.chr19 55215511 40 + 59248254 AACCCTTACGAGGTGTCGCTATTGGCAAGAGCAGACCAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47323191 40 + 51301725 AACCCTTACGAGGTGTCGCTATTGGCAAGAGCAGACCAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47015005 40 + 50890351 AACCCTTGCGAGGTGTCGCTATTGGCAAGAGCAGACCAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45524644 40 + 49145316 AACCCTTACAAGCCTCAGTTATTGGGGGAATCAGGACAAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19731580 1650 - 122678785 I a score=179447.000000 s hg38.chr19_GL949747v2_alt 291924 87 + 729520 ---TCTTAGGGTGAGTGATGGGAGCTGCTTTTCTAGGTCTAGGATGAGCCACATCTCAGATGCCCCACAAGGTCAGAAATGAGGGGGC--TT s panTro4.chr19 59248480 87 + 63644993 ---TCTTAGGGTGAGTGATGGGAGCTGCTTTTCTAGGTCTAGGATGAGCCACATCTCAGATGCCCCACAAGGTCAGAAATGAGGGGGG--TT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56098778 87 + 60714840 ---TCTTAGGGTTAGTGATGGGAGCTGCTTTTCTAGGTCTAGGATGAGCCACATCTCAGATGCCCCACAAGGTCAGAAATCAGGGGGA--TT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102859474 89 - 106955855 ---TCTTAGGGTTAGTGATGGGAGCTGCTTTTCTAGGTCTAGGATGAGTCACATCTCAGATGCCCCAGAAGGTCAGAAATGAGGGGGGGCTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55215551 87 + 59248254 ---TCTTAGGGTGACTGATAAGAGCTGCTTTTCTAGGTCTGGGATGAGCCACATCTCAGATGCCCCAGAAGGTCAGAAATGAGGGGGT--TT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47323231 87 + 51301725 ---TCTTAGGGTGACTGATAGGAGCTGCTTTTCTAGGTCTGGGATGAGCCACATCTCAGATGCCCCAGAAGGTCAGAAATGAGGGGGT--TT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47015045 87 + 50890351 ---TCTTAGAGTTACTGATAGGAGCTGCTTTTCTAGGTCTGGGATGAGCCACATCTCAGATGCCCCAGAAGGTCAGAAATGAGGGGGT--TT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45524684 81 + 49145316 GCCAGAGAGGGTTGCATATGAGAGC---------AAGTCTAGGTTAAGCCACATCTCAGATGCCCCAAAAAGTCAGAAATGAGGAGGC--TT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19731580 1650 - 122678785 I e rheMac3.chr19 60136917 27251 + 64156825 T a score=38094.000000 s hg38.chr19_GL949747v2_alt 292011 16 + 729520 TGGGG--GTCACTTCCAA s panTro4.chr19 59248567 16 + 63644993 TGGGG--GTCACTTCCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56098865 16 + 60714840 TGGGG--GTCACTTCCAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102859563 16 - 106955855 TGGGG--GTCACTTCCAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55215638 16 + 59248254 TGGGG--GTCACTTCCAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47323318 16 + 51301725 TGGGG--GTCACTTCCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47015132 16 + 50890351 TGGGG--GTCACTTCCAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45524765 18 + 49145316 TGGGGGAGTCACCTCCAG i calJac3.chr22 C 0 I 19113 s canFam3.chr1 102772110 16 + 122678785 TGGAG--GGTGTCACAGG i canFam3.chr1 I 7246 C 0 e rheMac3.chr19 60136917 27251 + 64156825 T a score=613173.000000 s hg38.chr19_GL949747v2_alt 292027 194 + 729520 GCTCAGGGGGAAGTCAGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAG-----TGGAGGAGGTCACGTCTGTCCTCCTTGTAGAGAGCAAACCTGTCATAGCCAACATCAGAGTGATACTGGAGGGTCAGGTTCTCTCCAGGGACCACAACAGGGCCCTGCGGGGTCAGGAGGGAGGGCTTTCTAGACACACCTGGA s panTro4.chr19 59248583 193 + 63644993 GCTCAGGGGGAAGTCAGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAG-----TGGAGGAGGTCATGTCCGTCCTCCTTGTAGAGAGCAAACCTGTCATAGCCAACATCAGAGTGACACTGGAGGGTCAGGTTCTCTCC-GGGACCACAACAGGGCCCTGCGGGGTCAGAAGGGAGGGCTTTCTAGACACACCTGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56098881 194 + 60714840 GCTCAGGGGGAAGTCAGCCTGGAAGAGCCCAGCCTGGGGCTGCCAGCCAG-----TGGAGGAGGTCATGTCTGTCCTCTTTGTATAGAGCAAACCTGTCATAGCCAACATCAGAGTGACACTGGAGGGTCAGGTTCTCTCCAGGTACCACAACAGGGCCCTGTGGGGTCAGGAGGGAGGGCTTTCTAGACACACCTGGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102859579 194 - 106955855 GCCCAAGGGGAAGTCAGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAG-----TGGAGGAGGTCATGTCTGTCCTCCTTGCACAGAGCGAACCTGTCATAGCTGACATCAGAGTGACACTGGAGGGTCAGGTTCTCTCCAGGGACCACAACAGGGCCCTGCGGGGTCAGGAGGGAGGGCTCTCTAGACACGCCTGGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60109666 199 + 64156825 GCTCAGGGTGAAGCTGGCCTGGGAGAGCCCAGCCTGGGGTTGCTGACCAGGGCGCTGGAGGAGGACATGTCCCCCCTCCTGGTACAGAGCGAATCTGTCGTAGCCGACATCAGAGCGACACTGCAGGGTCAGGCTGCCTCCACGGGCCACCACAGGGCCCTGCGGGGCCAGGAGGGAGGGCTTCCTAGACACGCCTGGA i rheMac3.chr19 T 27251 I 664 s macFas5.chr19 55215654 197 + 59248254 GCCCAGGGGGAAGTCATCCTGGGAGAGCCCAGCCCGGGGCTGCTGGCCAGGGTGCTGGAGGAGGTCATGTCTGTTCTCC--GTGTATAGTGAACCTGTCATAGCCAACATCAGAGTGACACTGGAGGGTCAGGTTCTCTCCAGGGACCACAACAGGGCCCTGTGGGGTCAGGAGGAAGGGCATTCTAGACACACCTGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47323334 197 + 51301725 GCCCAGGGGGAAGTCATCCTGGGAGAGCCCAGCCTGGGGCTGCTGGCCAGGGTGCTGGAGGAGGTCATGTCTGTCCTCC--GTGCATAGTGAACCTGTCATAGCCAACATCAGAGTGACACTGGAGGGTCAGGTTCTCTCCAGGGACCACAACAGGGCCCTGTGGGGTCAGGAGGAAGGGCTTTCTAGACACACCTGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47015148 197 + 50890351 GCCCAGGGGGAAGTCATCCTGGGAGAGCCCAGCCCGGGGCTGCTGGTCAGGGTGCTGGAGGAGGTCATGTCTGTCCTCC--GTGTATAGTGAACCTGTCATAGCCAACATCAGAGTGACACTGGAGGGTCAGGTTCTCTCCAGGGACCACAACAGGGCCCTACGGGGTCCGGAGGGAGGGTTTTCTAGACACACCTGCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543896 199 + 49145316 GCTCAGGGTGAAGTTGGCCTGGGAGAGCCCAGCCTGGGTCTGCCGGCCAGGGCGCTGGAGGAGGTCAGGTCCCCAGTCCTTGTACAGAGTGAACCTGTCGTAGCCGACATCAGAGCCACACTGGAGGGTCAGCCTCTCCCCAGGGGCCACGACAGGACCCGGCTGCACTGAGAGTGATGGCTTCTCAGAAACACCTGGG i calJac3.chr22 I 19113 C 0 s canFam3.chr1 102772126 199 + 122678785 GCCCGGGGGGATATCTGCCCTAGAAAGCCCAGCCTGTGGCTGTCAGCCATGACACTGGAGAAGGTTCTGTGCCCCTCTCTTGGACAGAGTGAATCTGTCATAGCTGACATCGGAGAGACACTGGAGAGTCAGGTTCTGTCCAGAGGTCACAATAGGGCCCTGCTGGGTCAGCAGGTAGGGCTTTCGTGCTAAACCTGGG i canFam3.chr1 C 0 C 0 a score=1365.000000 s hg38.chr19_GL949747v2_alt 292221 1 + 729520 A s panTro4.chr19 59248776 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099075 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102859773 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45544095 1 + 49145316 A i calJac3.chr22 C 0 T 64121 s canFam3.chr1 102772325 1 + 122678785 A i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47015345 0 + 50890351 C e papAnu2.chr19 47323531 0 + 51301725 C e macFas5.chr19 55215851 0 + 59248254 C e rheMac3.chr19 60109865 664 + 64156825 I a score=104728.000000 s hg38.chr19_GL949747v2_alt 292222 52 + 729520 GGATAAAGGAGCCGGGACTGCAGGGGCTGGTTCCTCCTATAAACC-TCCTTCT s panTro4.chr19 59248777 52 + 63644993 GGAAAAAGGAGCCAGGACTGCAGGGGCTGGTTCCTCCTGTAAACC-TCCTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099076 52 + 60714840 GGAAAAAGGAGCCGGGACTGCAGGGGCTGGTTCCTCCTATAAACC-TCCTTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102859774 52 - 106955855 GGAAAAAGGAGCTGAGACTGCAGGGGCCAGTTTCTCCTGTAAACC-CCCTTCT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55215851 52 + 59248254 GGGGAAAGGAGCCGGGAGTGCAGGGGCTGGTTCCTTCTGTAAACC-TCCGTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47323531 52 + 51301725 GGGGAAAGGAACCAGGAGTGCAGGGGCTGGTTCCTTCTGTAAACC-TCTATCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47015345 52 + 50890351 GGGGAAAGGAGCCGGGAGTGCAGGGGCTGGTTCCTTCTGTAAACC-TCCGTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45479975 53 + 49145316 GGAAAGGGGAGCGGGGACTCGGATGGCTGGTTCCTCCCATGCCCCTTCCTTCT i calJac3.chr22 T 64121 I 83762 s canFam3.chr1 102772326 46 + 122678785 --GAAGACCAGCCCAGATTCCAAGGGCTGATTCTCCCC--AAACT-TCCCT-- i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60109865 664 + 64156825 I a score=34847.000000 s hg38.chr19_GL949747v2_alt 292274 15 + 729520 GGAGTCTCCCTTGCT s panTro4.chr19 59248829 15 + 63644993 GGAGTCTCCCTTGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099128 15 + 60714840 GGAGTCTCCGTTGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102859826 15 - 106955855 GGAGTCTCCCTTGCT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55215903 15 + 59248254 GGAGTCTTCCTTGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47323583 15 + 51301725 GGAGTCTTCtttgct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47015397 15 + 50890351 AGAGTCTTCCTTGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45563790 15 + 49145316 GTAGTCTTCCTCACT i calJac3.chr22 I 83762 I 20 s canFam3.chr1 102772372 11 + 122678785 ----TCTCCCATTCT i canFam3.chr1 C 0 I 1004 e rheMac3.chr19 60109865 664 + 64156825 I a score=22752.000000 s hg38.chr19_GL949747v2_alt 292289 15 + 729520 CTGtttttctttttc s panTro4.chr19 59248844 15 + 63644993 CTGtttttctttttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099143 15 + 60714840 CTGTTTttctttgtc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102859841 15 - 106955855 TTGGGTTTCTTTCTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55215918 15 + 59248254 CTGtttttctttttc i macFas5.chr19 C 0 I 307 s papAnu2.chr19 47323598 15 + 51301725 ctgtttttctttttc i papAnu2.chr19 C 0 I 319 s chlSab2.chr6 47015412 15 + 50890351 CTAtttttctttttc i chlSab2.chr6 C 0 I 453 e canFam3.chr1 102772383 1004 + 122678785 I e calJac3.chr22 45563805 20 + 49145316 I e rheMac3.chr19 60109865 664 + 64156825 I a score=65076.000000 s hg38.chr19_GL949747v2_alt 292304 44 + 729520 ttttt------------------ttttttttttgagacagagtctcgctctgtcacccaggc s panTro4.chr19 59248859 62 + 63644993 tttttctttttcttttttcttttttttttttttgagacagagtctcgctctgtcacccaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099158 50 + 60714840 tttgtcttttt------------ttttttttttgagacagagtctctctctgtcacccaggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102859856 55 - 106955855 TTTCTTttcttttttt-------ttttttttttgagacagagtctctctctgtcacccaggc i nomLeu3.chr10 C 0 M 957 s macFas5.chr19 55216240 44 + 59248254 ttttt------------------ttttttttgtgagatggaatctcgctctgtcacccaggt i macFas5.chr19 I 307 C 0 s papAnu2.chr19 47323932 44 + 51301725 ttttt------------------ttttttttttgagatggaatctcgctctgtcacccaggt i papAnu2.chr19 I 319 C 0 s chlSab2.chr6 47015880 44 + 50890351 ttttt------------------ttttttttttgagatggaatctcgctctgttacccgggt i chlSab2.chr6 I 453 C 0 e canFam3.chr1 102772383 1004 + 122678785 I e calJac3.chr22 45563805 20 + 49145316 I e rheMac3.chr19 60109865 664 + 64156825 I a score=129001.000000 s hg38.chr19_GL949747v2_alt 292348 99 + 729520 tggagtgcaatgacacagtctcggctcactgcaacctccgcctcccgggttcgagcgattctcctgcctcagcctcccaagtagctgggattacaggtg s panTro4.chr19 59248921 99 + 63644993 tggagtgcaatgacacagtctcggctcactgcaacctccgcctcccgggttcgagcgattctcctgcctcagcctcccaagtagctgggattacaggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099208 99 + 60714840 cagagtgcaatgacacaatcttggctcactgcaacctccgcctcccgggtttgagcgattctcctgcctcagcctcccaagtagctgggattacaggtg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55216284 99 + 59248254 tggagtgcaatgacacaatcttggctgactgcaacctctgcctcccagattcaagcgattctcctgcctcagcctcccaaatagctgggattacaggtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47323976 99 + 51301725 tggagtgcaatgacacaatcttggctgactgcaacctctgcctcccagattcaagcgattctcctgcctcagcctcccaaatagctgggattacaggtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47015924 99 + 50890351 tggagtgcaatgacacaatcttgactgactgcaacctctgcctcccagattcaagcaattctcctgcctcagccccccaaatagctgggattacaggtg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102772383 1004 + 122678785 I e calJac3.chr22 45563805 20 + 49145316 I e nomLeu3.chr10 102859911 957 - 106955855 M e rheMac3.chr19 60109865 664 + 64156825 I a score=278887.000000 s hg38.chr19_GL949747v2_alt 292447 163 + 729520 tgtgccgccacgcccagctaatttttgtatttttagtagaaatggggtttcaccatgttggccaggctggtcttgaactcctgacatcaggtgatccacctgcctcggcctcccaaagtgctgagattacacgtgtgagccactgtgcccagccCTTGCTTTG s panTro4.chr19 59249020 163 + 63644993 tgtgccgccacgcccagctaatttttgtatttttagtagaaatggggtttcaccatgttggccaggctggtcttgaactcctgacatcaggtgatccacccgcctcggcctcccaaagtgctgagattacaggtgtgagccactgtgcccagccCTTGCTTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099307 163 + 60714840 tgtgccaccacgcccagctaatttttgtatttttagtagaaatggggtttcaccatgttggccaggctggtcttgaactcctgacatcaggtgatccacctgcctcggcctcccaaagtgctgagattacaggcgtgagccactgcgcctggccCTTGCTCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102860870 163 - 106955855 TgcgccaccgtgcctggctaatttttgtatttttagtagaaatggggtttcgccatgttggccagcctggtcttgaactcctgacatcaggtgatccacccgcctcagcctccctaagtgctgagattacaggcgtgagccaccgcgcctggccCTTGCTCTG i nomLeu3.chr10 M 957 C 0 s macFas5.chr19 55216383 162 + 59248254 tgtaccaccacacccagct-atttttatatttttagtagagatggggtttcactgtgttggtcaggctgttcttgaactcttgacatcaggtgatccacccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatgcccggccTTTGCTCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47324075 162 + 51301725 tgtaccaccacacccagct-atttttatatttttagtagagatggggtttcactgtgttggtcaggctgttcttgaactcctgacatcaggtgatccacccgcctcagccttccaaagtgctgggattacaggtgtgagccaccgcgcccggcctttgctCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47016023 162 + 50890351 tgtaccaccacacccagct-atttttatatttttagtagagatagggtttcgccgtgttggccaggcagttcttgaactcctgacatcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagccTTTGCTCTG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102772383 1004 + 122678785 I e calJac3.chr22 45563805 20 + 49145316 I e rheMac3.chr19 60109865 664 + 64156825 I a score=191595.000000 s hg38.chr19_GL949747v2_alt 292610 97 + 729520 TTTTCCTCACCCTGAATTTGTGTCCCTAGGATTTCTGTGTTCTCCTTCCCCTTTTTGTCTTTCTTAGCAGGGGCTGCCCTGCCTGTAAAGCTCTCCA s panTro4.chr19 59249183 97 + 63644993 TTTTTCTTACCCTGAATTTGCATCCCTAGGATTTCTGTGTTCTCCTTCCCCTTTTTGTCTTTCTTAGCAGGGGCTGCCCTGCCTGTAAAGCTCTCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099470 97 + 60714840 TTTTTCTCAACCTGAATTTGTGTCCCTAGGATTTCTGTGTTCTCCTTCCCCTTTTTTTCTTTCTTAGCAGGGGCTGCCCTGCAGGTAAGGCTCTCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102861033 97 - 106955855 TTTTTCTCACCCTGAATTTGTGTCCCTAGGATTTCTGTGTTCTCCTTCCCCTTTTTTTCTTTCTTAGCAGGGGCTGCCCTGCAGGTAAGGCTCTCCA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55216545 97 + 59248254 TTTTTCTCACTCTGAACTTGTATCCCTAGGATTTCTGTATTCTCCTTCCCCTTTTTTTCTTTCTTAGCAGGGGCTGCCCTGCAGGTAAGAGTCTCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47324237 97 + 51301725 TTTTTCTCACTCTGAACTTGTATCCCTAGGATTTCTGtgttctccttcccctttttttctttcttagcgGGGGCTGCCCTGCAGGTAAGACTCTCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47016185 97 + 50890351 TTTTTCTCACTCTGAATTTGTATCCCTAGGATTTCTGTGTTCTCCTTCCCCTTTTTTTCTTTCTTAGCAGGGGCTGCCCTGCAGGTAAGACTCTCTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45563825 91 + 49145316 TTTTCCTCACTCTATATCTGTGTCCCCAGGGGCCCG------TTTTTCCCTTATCTTTTCTTCTCTAGTGGGTCTAGCCTGAGGGCAAGGCTGCCAA i calJac3.chr22 I 20 T 83559 e canFam3.chr1 102772383 1004 + 122678785 I e rheMac3.chr19 60109865 664 + 64156825 I a score=58128.000000 s hg38.chr19_GL949747v2_alt 292707 27 + 729520 CAACCTGTCTGGCTTCCCTGAATTGTA s panTro4.chr19 59249280 27 + 63644993 CAACCTGTCTGGCTTCCCTGAATTGTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099567 27 + 60714840 CAACCTGTCTGGCTTCCCTAAATTGTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102861130 27 - 106955855 CAACCTGTCTGGCTTTCCTAAATTGTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55216642 27 + 59248254 CAACCTGCCTGGCTCCCCTAAATTGTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47324334 27 + 51301725 CAACCTGTCTGGCTCCCCTAAATTGTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47016282 27 + 50890351 CAACCTGTCTGGCTCCCCTAAATTGTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45480357 27 + 49145316 CAGCCTGTCTGCTGCCCCAAAAGTGTG i calJac3.chr22 T 83559 I 63902 e canFam3.chr1 102772383 1004 + 122678785 I e rheMac3.chr19 60109865 664 + 64156825 I a score=5675.000000 s hg38.chr19_GL949747v2_alt 292734 3 + 729520 CTA s panTro4.chr19 59249307 3 + 63644993 CTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099594 3 + 60714840 CTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102861157 3 - 106955855 CTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55216669 3 + 59248254 CAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47324361 3 + 51301725 CTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47016309 3 + 50890351 CTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544286 3 + 49145316 CCA i calJac3.chr22 I 63902 C 0 e canFam3.chr1 102772383 1004 + 122678785 I e rheMac3.chr19 60109865 664 + 64156825 I a score=617646.000000 s hg38.chr19_GL949747v2_alt 292737 247 + 729520 GAGAAGACTGTGGCTTCCTCACCTGAGACCGGAATCTCCAGGAGGTCACTGGGTTCTGACCATACCTGCAGGATATGCCTGCG--AGAGCCATAGCATCTGAGCATCCACCTGTGGCTGGGGGTCACAGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTGGGGGTCAGCTGTGAGTCCAAGGTCCAGGAGAGCTTGTGGTCTCCTTCCTCAGTCAGAATGAACCTGTCGAATCTCAGCCGTGAGC s panTro4.chr19 59249310 247 + 63644993 GAGAAGGCTGTGGCTTCCTCACCTGAGACCGGAATCTCCAGGAGGTCACTGGGTTCTGACCATACCTGCAGGATATGCCTGCG--AGAGCCATAGCATCTGAGCATCCACCTGTGGCTGGGGGTCACAGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTGGGGGTCAGCTGTGAGTCCAAGGTCCAGGAGAGCTTGTGGTCTCCTTCCTCAGTCAGAATGAACCTGTTGAATCTCAGCCATGAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099597 247 + 60714840 GAGAAGGCTGTGGCTTCCTCACCTGACACCAGAATCTCCAGGAGGTCACTGGGTTCTGACCACACCTGCAGGATATGCCTGCG--AGAGCCATAGCATCTGAGCATCCACCTGTGGCTGGGGGTGACGGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTGGGGGTCAGCTGTGAGTCCAGGGTCCAGGAGAGCTTGTGGTCTCCTTCCTCAGTCAGAATGAACCTGTCGAATCTCAGCCGTGAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102861160 247 - 106955855 GAGAAGGCTGTGGCTTCCTCACCTGAGATCAGAATCTCCAGGAGGTCACTGGGTTCTGACCACACCTGCAGGATATGCCTGCG--AGAGCCATAGCATCTGAGCATCCACCTGCGGCTGGGGGTCACGGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTGGGGGTCAGCTGTGAGTCCAAGGTCCAGGAGAGCTTGTGGTTTCCTTCCTCAGTCAGAATGAACCTGTCGAATCTCAGCCGTGAGC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55216672 247 + 59248254 GAGAAGGCTGTGGCTTCCTCACCTGAGACCGGAATCTCCAGGAGGTCACTGGGTTCTGACCACACCTGTAGGATATGCCTGCG--AGAGCCATAGCATCTGAACGTCCACCTGTGGCTGGGGGTCACGGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTAAGAGACAGCTGTGAGTTCGAGGTCCAGGAGAGATTGTGGTCTCCTTCCTCAGTCAGAATGAACCTGTCGAATCTTAGCCGTGAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47324364 247 + 51301725 GAGAAGGCTGTGGCTTCCTCACCTGAGACCGGAATCTCCAGGAGGTCACTGGGTTCTGACCACACCTGTAGGATATGCCTGCG--AGAGCCATAGCATCTGAGCATCCACCTGTGGCTGGGGGTCACGGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTAAGAGACAGCTGTGAGTTCGAGGTCCAGGAGAGACTGTGGTCTCCTTCCTCAGTCAGAATGAACCTGTCGAATCTTAGCTGTGAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47016312 247 + 50890351 GAGAAGGCTGTGGCTTCCTCACCTGAGACCGGAATCTGCAGGAGGTCACTGGGTTCTGACCACACCTGCAGGATATGCCTGCG--AGAGCCATAGTATCTGAGCATCCACCTGTGGCTGGGGGTCACGGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTAGGAGACAGCTGTGAGTTCGAGGTCCAGGAGAGATTGTGATCTCCTTCCTCAGTCAGAATGAACCTGTCGAATCTCAGCCGTGAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544289 241 + 49145316 GACAATACTATGAATTTCTCACCTGGGACCAGGAGCTCCAGGAGATCACTGGGTGAAGACCACACAT--AGGGAAAGCTTGAGTCATAACCATAGCACCTGTACGTCCACCTGCGACTCGGGCTCACGGGGCCCACGGAGAAGATGGCCCGGGATGACCCAGGGGTACGGGGCTGGGAGC------TGCATGGTGGGTGTTCATCTTCTTCCTTACACAGAATGAAGCCATGAAATGGCAACTCTGAGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19733230 245 - 122678785 GAGAGGGTTG-GGCTT-CTCACCTGAGTCCAACAGCTCCAGGGGGTCACTGGAGAATGACCACACTTGGAGGGTGTTGCTGTA--ATAACCATAGCATCTGAATGACCACTTGAGGCTGGGGTCCACGGGGCCCACAGGGAACAGGCCCTGGAACACCTCACTGGGGGCTCGCTGGGAGTCCTGAGTCCAGGACGGTTGGCCTTCTCCTTCCTTCATCAGGACAAACCTGTGGAATCCTGTCTGTAAAC i canFam3.chr1 I 1650 C 0 e rheMac3.chr19 60109865 664 + 64156825 I a score=2446185.000000 s hg38.chr19_GL949747v2_alt 292984 763 + 729520 CACACTGGAGGGTCACGTTCTCTCCTGAGGTCACCACAGGACTGGGCAGGGCTGAGAGGGTGGGTTTGTTGTAGAATCCTAGGAGAGAAGGAGGCACCGTGTTAAATGGGGCTCCCA-CCTCCCACATCAT-CCCCAGGGCTGGGCTGTGAAAGGGAGACACCCCTGAGAGCCGACCCCCTTCCTGAGGGCAGAGCCTGGAGCTGGGACCCCAGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTGTAGTAGTAACAGCGGTATCTCCCTGCATGGTGCTCTGTCATGGATGGGATGGAGAATCTGGCCTTGTTCTTGGGCTCCAGTGGGTTCTGTGTGTCCCAGGGTTCTGGGCTTCCCTCTTTAACCAGACGGTATTCCTGGGCCTCCAGGGTCCCCTGACACCGGATGGTCACAGAGTTCCCCCGGCTGATCACAGAGCCTGGCTCAGCCCAGAGGGTGGCTTTGGAGAGGTTCCCTGGAAGGAAATCAGAGTCTGGGCTCCAAGACCT-----CCCCACCCCTCAGATCCCAGCTCTCAGCCCCAGGACCCTCCAGACGT-CCCCATCAATCA-CCCAGAACTGCGGTCTTCACCCCCAGCTGCCC-ATGGGTGGCCCTTTGTCCCCATTGAGGAGGAGGGACCTGGGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCC s panTro4.chr19 59249557 763 + 63644993 CACACTGGAGGGTCATGTTCTCTCCTGAGGTCACCACAGGGCTGGGCAGGGTTGAGAGGGTGGGTTTGTTGTAGAATCCTAGGAGAGAAGGAGGCACCGTGTTAAATGGGGCTCACA-CCTCCCGCGTCAT-CCCCAGGGCTGGGCTGTGAAAGGGAGACACCCCTGAGAGCCGACCCCCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCAGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTGCGATAGTAACAGCGGTATCTCCCTGCATGGTGCTCTGTCATGGATGGGATGGAGAATCTGGCCTTGTTCTTGGGCTCCAGTGGGTTCTGTGTGTCCCAGGGTTCTGGGCTTCCCTCTTTATCTAGACGGTATTCCTGGGCCTCCAGGGTCCCCTGACACCGGATGGTCACAGGGTTCCCCCGGCTGATCACAGAGCCTGGCTCAGCCCAGAGGGTGGGTTTGGAGAGGTTCCCTGGAAGGAAATCAGAGTCTGGGCTCCAAGACCT-----CCCCACCCCTCAGATCCCAGCTCTCAGCCCCAGGACCCTCCAGATGT-CCCCATCAATCA-CCCAGAACTGCAATCTCCACCCCCAGCTGTCC-ATGGGTGGCCCTTTGTTCCCATTGAGGAGGAGGGACCTGGGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099844 763 + 60714840 CACACTGGAGGGTCACATTCTCTCCTGAGGTCACCACAGGGCTGGGCACGGCTGAGAGGGTGGGTTTGTTGTAGAATCCTAGGAGAGAAGGATGCACCGTGTTAAATGGGGCTCACA-CCTCCCACATCAT-CCCCACGGCTGGGCTGTGAGAGGGAGACGCCCCTGAGAGCCGACCCCCTTCCCGAGGGCAGAGCCTGGGGCTGGGACCCTGGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTGACATAGTAACAGCGGTATCTCCCTGCATGGTGCTCTGTCATGGATGGGATGGAGAATCTGGCCTTGTTCTTGGGCTCCAGTGGGTTCTGTGTGTCCCAGGGTTCTGGGCTTCCCTCTTTATCCAGATGGTATTCCTGGGCCTCCAGGGTCCCCTGACACCAGATGGTCACAGAGTTCCCCCGGCTGATCACAGAGCCTGGCTCAGCCCAGAGGATGGGTTTGGAGAGGTTCCCTGGATGGAAATCAGAGTCTGGGCTCTAAGACCT-----CCCCACCCCTCAGATCCCAGCTCTCAGCCCCAGGACCCTCCAGACAT-CCCCATCAGTCA-CCCAGAACTGCGGTCTCCACTCCCAGCTGCCC-ATGGGTGGCCCTTTGTCCCCAGTGAGGAGGAGGGACCTGGGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGGGATTTGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102861407 763 - 106955855 CACACTGGAGGGTCACGTTCTCTCCTGAGGTGACCACAGGGCTGGGCACGGCTGAGAGGGTGGGTTTGCTGTAGAATCCTAGGAGAGAAGGAGGCACCATGTTAAATGGGGCTCCCA-CCTCCCACATCAT-CCCCAGGGCTGGGCTGTGAGAGGGAGACGCCCCTGAGAGCCGACCCCCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCTGGAGTGTCCTCTCACCTGTCACCACGAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTGTGATAGTAACAGCGGTATCTCCCTGCCTGGTGCTCTGTCATGGATGGGATGGACAAGTTGGCCCTGTTCCTGGGTTCCAGTGGGTTCTGTGTGTCCCAGGATGCTGGGCTTCCCTCTTTATACAGACGGTACTCCTGGGCCTCCAGGGTCCCCTGACACCAGATGGTCACAGGGTTCCCCCGGCTGATCACAGAGCCTGGCTCAGCCCAGAGGGTGGGTTTGGAGAGATTTCCTGGAAGGAAATCAGAGGCTGGGCTCCAAGACCT-----CCCCACCCCTCAGATCCCAGCTCTCAGCCCCAGGGCCCTCCAGACGT-CCCCATCAGTCA-CCCAGAACTGCGGTCTCCACCCCTAGCTGCTC-ATGGGTTGCCCTTTGTCCCCAGTGAGGAGGAGGGACCTGGGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGGGATTTGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60110529 763 + 64156825 CACACTGGAGGGTCACGTTCCCTCCTGAGGCCACCACAGGGCTGGGCAGGGCTAAGAGAGTGGGCTCTGCATAGAATCCTAGGAGAGAAGGAGGCACCGTGTTAAATGGGACTCACA-ACTCCCGCATCAT-CCCCAGGGATGGGCTGTGAGAGGGAGACGCCCCTGAGAGCCGACCCCCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCACTGGGCTCTGACCAGCCTGCAGGGGTCTCAAAGTAGCAGCGGTATCGCCCTGCAGTGCTGTACACCGCGGAGCGAATGTGGAACTTGGCCTTGGCTCCAGGCTCCAGTGGGTTCTGTCTCCCCCAGGTCCACGGGAGTCCCTCCTGATCCAGACGGTACTCCTGAGTCTCCAGGGGCCCCTGACACCAGAGGGTCACGGGGCTCCCCCTTATGATCACAGAGCCTGGCTCAGCCCAGAGGGTGGGTTTGGGGGGGGTGCCTAGAATGGAATCAGAGGCTGGATCCCAAGACAT-----CCTCATCCCTCAGATACTAGCTCCCAGCCCCAGGACCCTCCAGATGT-CCCCATCAGTCA-CCCAGAACAGCGATCTCCGCCCCCAGCTGCCC-GGGGTTGGGTCTTTGTCCCCAGTGAGAAGGAGGGACCTGGGAGAGCTGGGGACAGACTCACCCGCCTGCACGTGGGTCCTGGGGCCCAGACTCAACCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCC i rheMac3.chr19 I 664 I 24405 s macFas5.chr19 55216919 764 + 59248254 CACACAGGAGGGTCACGTTCCCTCCTGAGGCCACCACAGGGCTGGGCAGGACTGAGAGGGTGGGTTTGCTGTAGAATCCTAGGAGAGAAGGAGGCACCGTGTTTAATGGG-CTCCCA-CCTCCCACATCATCCCCCAGGGCTGGGCTGTGAGAGGGAGACGCCCCTGAGAGCCGACCCCCTTCCTGAGGACAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCACTGGGCTCTGACCAGCCTTCAGGGCTGAGATAGTAACAGCGAAATCTCCCTGCATGGTGCTCTGTCATGGATGGGATGGAGAATCTGGCCTTGTTCCTGGGCTCCAGTGGGTTCTGTGTGTTCCAGGGCGCTGTGCTTCCCTCTTTATCCAGACGGTACTCCTGGGCCTCCAGGGTCCCCTGACACCAGATGGTCACGGGGTTCCCCCGGATGATCACAGAGCCTGGCTCAACCCAGAGGGCGGGTTTGGGGAGGGGCCCTGGAAGGAAATCAGAGGCTGCATCCCAAGACGTC----CCTCAGCCCTCAGATCCCAGCTCCCAGTCCCAGGACCCTTCAGATGT-CGCCATCAGTCA-CCCAGAACTGCTGTCTCCTCCCCCAGCTGCCC-ATGGGTGGCCCTTTGTCCCCAGTGAGGAGGAGGGACCTGGGACAGCTGGGGACAGACTCACCTGCCTGCACACAGGTCCTGGGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTATGAGGGATTTGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47324611 763 + 51301725 CACACAGGAGGGTCACGTTCCCTCCTGAGGCCACCACAGGGCTGGGCAGGACTGAGAGCGTGGGTTTGTTGTAGAATCCTAGGAGAGAAGGAGGCACCGTGTTTAATGGG-CTCCCA-CCTCCCACATCAT-CCCCAGGGCTGGGCTGTGAGAGGGAGACGCCCCTGAGAGCCGACCCCCTTCCTGAGGACAGAGCCTGCGGCTGGGACCCCTGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTTCAGGGCTGAGATAGTAACAGCGAAATCTCCCTGCATGGTGCTCTGTCATGGATGGGATGGAGAATCTGGCCTtgttcctgggctccagtgggTTCTGTGTGTTCCAGGGCGCTGGGCTTCCCTCTTTATGCAGACGGtactcctgggcctccagggtCCCCTGACACCAGATGGTCACGGGGTTCCCCCGGATGATCACAGAGCCAGGCTCAGCCCAGAGGGTGGGTTTGGGGAGGGGCCCTGGAAGGAAATCAGAGGCTGCATCCCAAGACGTC----CCTCAGCCCTCAGATCCCAGCTCCCAGTCCCAGGACCCTTCAGATGT-CGCCATCAGTCA-CCCAGAACTGCTGTCTCCTCTCCCAGCTGCCC-ATGGGTGGCCTTTTGTCCCCACTGAGGAGGAGGGACCTAGGACAGCTGGGGACAGACTCACCTGCCTGCACACAGGTCCTGGGGCCCAGACTCAGCCCTGGAAGAGAATTCCCTGTGAGGGATTTGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47016559 761 + 50890351 CACACAGGAGAGTCACGTTCCCTCCTGAGGCCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTTGCTGTAGGCTCCTAGGAGAGAAGGAGGCACCGTGTTTAATGGG-CTCCCA-CCTCCCGCATCAT-CCCCAGGGCTGGGCTGTGAGAGGGAGACGCCCCTGAGAGCCGACCCCCTTCCTGAGGGCAGAGCCGGGGGCTGGGACCCCTGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCACTGTGCTCTGACCAGCCTGCAGGGCTGAGATAGTAACAGCGAAATCTCCCTGCATGGTGCTCTGTCATGAATGGGATGGAGAATCTGGCCTTGTTCCTGGGCTCCAGTGGGTTCTGTGTGTTCCAGGGCTCTGGGATTCCCTCTTTATCCAGACGGTACTCCTGGGCCTCCAGGGTCCCCCGACACCAGATGGTCACGGGGCTCCCCCGGATGATCACAGAGCCTGGCTCAGCCCAGAGGGCGGGTTTGTGGAGGGGCCCTGGAAGGAAATCAGAGGCTGGATCCCAAGATGT-----CCCCA-CACTCAGATCCCAGCTCCCAGCCCCAGGACCCTTCAGATGT-CACCATCAGTCA-CCCAGAACTGCTGTCTCCTCTCCCAGCTGCCC-ATGGGTGGCCCTTTGTCCCCAGTGAGGAGGAGGGACCTAGGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGCCCAGACTCAGACCTGGAAGAGAGTTCCCTATGAGGGATTTGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544530 761 + 49145316 CACACTGGAGGGTCACGCTTCTTCCTGGGGTCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTTCCTGTAGACTCCTAGGAGAAAAGGAGGCCCCGTGTTAAGTGGGGCTCACA-CCTCCCACATCAT--CCCAGGGCTGGGCTGTGAGAGGGAGATGCCCCTGAGTGCAGAGCCCCTTCCTGAGGGCAGATCCTGGGGCTGGGACCCCTGAGTG-ACTCTCACCTGTCACCACCAGCTCCAGGGGATCACTGGGCTTGGACCAGCCAGAGTGGCTGTAATACTGACAGCGATACTGCCCTGCGTGTTGCCAGGCGATGGACTGGATGGGGAACTGGCCCTTCTTCACAAGCTCCCGTGGGATCCATGTAATCCAGGATGCTGATGCTTTTTCTTTATATAGATGATACTCCTGGGCTTCCTGGTCCCCCTGACACCTGAGGGTCACAGGACTCCCCTGGGTGACCACAGAGCTTGGCTCAGCCCAGAGGGTGGGTGTGGGGAGGGTCCCTGGCAGGAAATCAGAGGTCAGATTCTAAGTCATTTACACCCAACCCAACAGATTCCAGCTCTCAGT-CAAGGACCCTCCAGAC---CCCCATCAGTCAGCCCAGAACTGCTGTTCCCCTCCCCAGCTGCAC-GGGGTGGGCC--TTGTCCCCAGTGAGGAGGA-AGACCTGGGCCAGCTGGGGACGGACTCACCTGCCTGCATGTGGGTCCTGGGGCCCAGACTTAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19733475 731 - 122678785 CACACTGGAGGGTCACATTCCCTCCTGAGGGCACGACAGGGCTGGGTAGGGCTGAGAGGTTGGGTTTGCCATGGAATCCTAGGAGAG-GGGAGGGGCTGTGTTAAATGGGGCTCAGATCCCCCCACATGAT-CCCCAGGACTCGGCTGTGAGACGGCAACA-CTCTAAGAGCAGATCTTCTTCCTGAGG------------TCTGGGACCC-TAAGTGGACTCTCACCTGTCACCACCAGCTCTAAGGGGTCACTGTAATGTGACTGGTCAGTGGCCCTTCTATAGTAGCAGCAATATCGTCCTGCATATTGCT--GTCATGTACATGATGGAGAACTTGGCCTTGTCCTTGGGTTCCAGTGCAGGCTGTCTCTCCCAAGGCCATAACTTTCCCTCTTTATGCAGGAGGTACTCCTGGGCCTTCAGGCTCCCCTGACACCAGATGGTCACAGGTGTCCCCCAGGGGATCACAGAACCTGGCTCAGTCCAGATGGTGGGTTTGGGGAGGATCCCTGGAAGGAAACAAGAGACTGGGTCACAAGATCC-----TCCCCACACCCAATTCCCAACT--CAGCCCCA--AACCCCCAGGTATCCCCCCTCTGTCAGCCCAGAGATGCTGATCTCCATGCCTCCTGCCTGGTTGGTGGTTC-CTGTTCCCAGTGAGGAGGTGGGA-ATGGGACCCCTGGGGACAGACTCACCTGCTTGTACTCGGGTCCTGGAGCTCACACTCAGCCCTGGAAGAGA-------------GGTTTGCC i canFam3.chr1 C 0 C 0 a score=1293329.000000 s hg38.chr19_GL949747v2_alt 293747 601 + 729520 TCTGAAGCCTGAGCAGGTCCTCCCCTGCCTGGGAACCTCCTAAAACCCTGGAGTTTCCTGATAGACAAGGGCCTCGTTATGGGGTGGGGTCCCTCCCAGACTAGGGTGCCCCTTCCCTGAGGCTTCCAATCTCACCGAGGCAGAGCAGAACCATGAGGGCAGGGCTCACGGCGTCTCCTCCCACTGGCTGCAGCTGTGCAGATGGATGAGACCATGGTGCCTGGCAGGACAGAGAGACACACAGGGTGTGGCAGCTCGGAGGCTGGGTCCTTCTTGTCATAGGATTTTCTCATTCTCAGCC-CACAGAAAGGGGAACTGCTC-TCCCCA--GGAGCCTGGCTCTCATTTCCCCAGGGCTGAAGTGAAGTAGTTGAGACTACAGGCACCAGGCTCTCTGCAGACATTTCAGACAGAAGTGGGGTC-TCCCTT-CCCCGGGCCACTGTCTGCCTGATTTATCTTTATCTCACTGAGAGCCGGGACACAG-CAGCAAATAGACCCGGTGCCTTCCTGAGTCAGCCCCTTTCAGGCGAGGGTGA----------CCTCCTCCCTCTCAGAGCCTCC-CCATGGGGTCTCCCTCCCTCCTTCAGCCCGTCCATGAGCTCAGCGT s panTro4.chr19 59250320 601 + 63644993 TCTGAAGCCTGAGCAGGTCCTCTCTTGCCTGGGAACCTCCTAAAACCCTGGAGTTTCCTGATAGACAAGGGCCTCGTTATGGGGTGGGGTCCCTCCCAGACTAGGGTGCCCCTTCCCTGAGGCTTCCAATCTCACCGAGGCAGAGCAGAGCCATGAGGGCAGGGCTCACGGCGTCTCCTCCCACTGGCTGCAGCTGTGCAGATGGATGAGACCATGGTGCCTGGCAGGACAGAGAGACACACAGGGTGTGGCAGCTCGGAGGCTGGGTCCTTCTTGTCATAGGATTTTCTCATTCTCAGCC-CACAGAAAGGGGAACTGCTC-TCCCCA--GGAGCCTGGCTCTCATTTCCCCAGGGCTGAAGTGAAGTAGTTGAGACTACAGGCACCAGGCTCTCTGCAGACATTTCAGACAGAAGTGGGGTC-TCCCTT-CCCCGGGCCACTGTCTGCTTGATTTATCTTTATCTCACTGAGAGCCGGGACACAG-CAGCAAATAGACCCGGTGCCTTCCTGAGTCAGCCCCTTTCAGGTGAGGGTGA----------CCTCCTCCCTCTCAGAGCCTCC-CCATGGGGTCCCCCTCCCTCCTTCAGCCCGTCCATGAGCTCAGCGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56100607 601 + 60714840 TCTGAAGCCTGGGCAGGCCTTCCCCTGCCTGGGAACCTCCTAACACCCTGGAGTTTCCTGATAGATGAGGGCCTGGTTATGGGGTGGGGTCCCTCCCAGACTAGGGTGCCCCTTCCCTGAGGCTTCCAATCTCACCGAGGCAGAGCAGCGCCATGAGGGCAGGGCTCACGGCATCTCCTCCCACTGGCTGCAGCTGTGCAGATGGATGAGACCATGGTGCCTGGCAGGACAGAGAGACACAGAGAGTGTGGCCGCTCGGAGGCTGGGTTCTTCTTGTCATAGGATTTTCTCATTCTCAGCC-CACAGAAAGGGGAACGGCCC-TCCCCA--GGAGCCTGGCTCTCATTTCCTCAGGGCTGAAGTGAAGTAGCTGGGACTACAGGCACCAGGCTCTCTGCAGACATTTCAGACAGAAATGGGGTC-TCCCTTCCCCCGGGCCACTGTC-GCCTGATTTATCTTTATCTCACTGAGAGCCGGGACACAG-CAGCAAATAGACCCGGTGCCTTCCTGAGTCAGCCCCTTTCAGGCGAGGGTGA----------CCTCCTCCCTCTCAGAGCCTCC-CCATGGGGTCTCCCTCCCTCCTTCAGCCCGTCCATGAGCTCAGCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102862170 603 - 106955855 CCTGAAGCCTGAGCAGGCCCTCCCCTGCCTGGGAACCTCCTAACACCCTGGGGTTTCCTGATAGACAAGGGCCTGGTTACGGGGTGGGGTCCCTCCCAGACTAGGGTGCCCCTTCCCTAAGGCTTCCAATCTCACCCAGGCAGAGCAGAACCATGAGGGCAGGGCTCACGGCATCTCCTCCCACTGGCTGCAGCTGTGCAGATGGATGAGACCATGGGGCCTGGCAGGTCAGAGAGACACACAGGGTGTGGCCGCTTGGAGGCTGGGTCCTTCTTGTCATGGGGTTGTCTCATTCTCAGCC-CACAGGAAGGGGAGCTGCCC-TCCCCG--GGAGCCTGACTCTCATTTCCCTAGGGCTGAAGTGAAGTAGCTGGGACTACAGGCACCACGCTTTCTGCAGACATTTCAGACAGAAATGGAGTC-TCCCTTCCCCTGGGCCACTGTCTGCCTGATTTATCGTTATCTCACTGAGAGCCGGGACACAGTTTTCAAATAGACCTGGTGCCTTCCTGAGTCAGCTCCTTTCAGGCAAGGGTGA----------CCTCCTCCCTCTCAGAGCCTCC-CCATGGGGTCTCCCTCCCCCCTTCAGCCCGTCCATCAGCTCAACAT i nomLeu3.chr10 C 0 T 65487 s macFas5.chr19 55217683 592 + 59248254 CCTGAAGCCTGAGCAGACCCTCCCCGCCCTGGGAACCTGCTAACACCCTGGAGTTTCCTGATAGACAAGGCCCTGGTTATGGAGTGGGGTCCCTCCCAGACTAGGGTGCCCCTTCCCT---GCTTCCAATCTCACCGAGGCAGAGCAGAGCCACGAGGGCAGGGGTCACAGCATCTCCTCCCACTGGCTGCAGCTGTGCAGATGGATGAGACCATGGTGCCTGGCAGGACAGAGACACACACAGGGTGTGGCCGCTCGGAGGCTGGGTCCTTCTTGTCATAGGGTTGTCTCATCCTCAGCC-CACAGGAAGGGGAACCGCCC-TCCCCC--CGAGCCTGGCTCTCATTTCCCCAGGGCTGAGGTGGGG-----------GCGGGCATCAAGCTCTCTGCAGACATTTCAGAGAGAAATGGGGTC-TCCCCGTCCCCGGGCCACTGTCTGCCTGATTTATCTTTATCTCACTGAGGGCCGGGACACAG-CAGCAAATAGACCCGGTGCCTTCCTGAGTCAGCCCCTT-----AGAGGGAGA-CCGTGGGCTCCTCTTCCCTCTCAGAGCCTCC-CCATGGGGTCTCCCTCCCTCCTTCAGCCCGTCCATCGGCTCAGCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47325374 597 + 51301725 CCTGAAGCCTGAGCAGACCCTCCCCGCCCTGGGAACCTGCTAACACCCTGGAGTTTCCTGATAGACAAGGCCCTGGTTATGGAGTGGGGTCCCTCCCAGACTAGGGTGCCCCTTCCCT---GCTTCCAATCTCACCGAGGCAGAGCAGAGCCACGAGGGCAGGGGTCACAGCGTCTCCTCCCACTGGCTGCAGCTGTGCAGATGGATGATACCATGGTGCCTGGCAGGACAGAGACATACACAGGGTGTGGCTGCTCGGAGCCTGGGTCCTTCTTGTCATAGGGTTGTCTCATCCTCAGCC-CACAGGAAGGGGAACCGCCC-TCGCCT--GGAGCCTGGCTCTCATTTCCccagggctgaggtgggg-----------gcggGCATCAGGCTCTCTGCAGACATTTCAGAGAGATATGGGGTC-TCCCCGTCCCCGGGCCACTGTCTGCCTGATTTATCTTTATCTCACTGAGGGCCGGGACACAG-CAGCAAATAGACCCGGTGACTTCCTCAGTCAGCCCCTTTCAGGCGAGGACGA-CCGTGGGCTCCTCTTCCCTCTCAGAGCCTCC-CCATGgggtctccctccctccttcagccCGTCCATCGGCTCAGCGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47017320 597 + 50890351 -CCTAAACCTGAGCAGACCCTCCCCGCCCTGGGAACATGCTAACACCCTGGAGCTTCCTGATAGACAAGGCCCTGGTTATGGAGTGGGGTCCCTCCCAGACTAGGGTGCCCCTTCCCT---GCTTCCAATCTCACCGAGGCAGAGCAGAGCCACGAGGGCAGGGGTCACAGCGTCTCCTCCCACTGGCTGCAGCTGTGCAGATGGATGAACCCTCGGTG-CTGGCAGGACAGACACACACACAGGGTGTGGCTGCTCGGAGGCTGGGTCCTTCTTGTCATGGGATTGTCTCATCCTCAGCC-CACAGGAAGGGGAACTGCCC-TCCCCCCGGGAGCCTGGCTCTCATTTCCCCAGGGCTGAGGTGGGG-----------GCGGGCACCAGGCTCTCTGCAGACATTTCAGAGAGAAATGGGGTC-TCCCCGTCCCTGGGCCACTGTCTGCCTGATTTATCTTTATCTCACTGAGGGCCGGGACACAG-CAGCAAATAGACCCAGTGACTTCCTCAGTCAGCCCCTTTCAGGCGAGGACGA-CCATGGGCTCCTCTTCCCTCTCAGAGCCTCC-CCATGGGGTCTCCCTCCCTCTTTCAGCCCGTCCATCGGCTCAGCGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45545291 595 + 49145316 CCTGAAGCCTGAGCAGCTCCTTCCCTCCCTGGGGTCTTTGTGAGCCCCTGGGGTCTCCTTATGGACCAG--TTTGGCTGTGGGGTGAGGTCCCTCCTAGGTTAGAATCTCCCCTCCCT----CTTCAAATCTCACCGAGACAGATCAGGACCATGAGGATGGGGGTCATGGCGTCTCCTCCCACTGCC--CTGCTCTGCGGATGGATGAGCCCTCGGTG-CTGGCAGGACAGAGAGACAC--AGGGTGTGGACACTTGGTGCCTTGGTTGTTCTTGTCATGGGGTTGTGTCATCTGCAGCCACACAGGAAGCAGAACTGCCC-TCCACA--GGAGCCTGGCTCTCATTCCTTTAGGTTTGAGGTAGGG--GTGGGG---GTGGGT-CCAACCCCTCTGCAGACATTTCAGACTGTAATGGGGTCTTTCCTGACCCCCAGCCACTGTCTGTCTGCTTTGTCCTCATCTCACTGAGAGCCGGGATATAG-CAGCAAATAGAACTGGTGCCTTCCTGTATCTGC-CCTTCCAGATGAGGGTAAGCTAAGGATTCCTGTTCCTTCTCACAGCCT-C-CCATGAGGTCTCCCTCCCTCCTTCAGCCTGTCCATCAGCACAGCAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19734206 453 - 122678785 -CTGAGTTCTGAGCAGAA---TCCCTTCTCATAAGCCTCCTGAG--CCTGGGATCT-TTGACAGACAAGGACCTGGCTGTGGGGTG-GGTCCCTCCCAGACTAGGGGGTTCCCTCCTC---TCCTCAGATCTCACCTAGACAGAGCATGGCCATCATGGTTAGGGTCATGGTGTCTTCTCTCTCTGGTT-CAGCTGTGCAGATGGAGGA-ACCTCAGTG-CCCACAGGACAGACAGACACACAGGGTGTGTCCCCTTGGGGACC-AGTCTTCCTCATCATGGGGTTGTCACGTCAGCAACCATACAAGAAGGAAAACACCTTGTTCTCC--GGGGCCTAGCCT----------------------------------------------------------------------------GGGTC----------------------------------------------TGAGGTCCATGATGGTG-CAGCAAGTGGACTCTGACATGTCCTG-----------TCCATGTGAGGA-GA-CCTGCATATGTTCTTTCCTCCCAGAATCTCCTCCATAGGGTATCCTTCAACC--TCAGCATATCCCT----------- i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60111292 24405 + 64156825 I a score=384550.000000 s hg38.chr19_GL949747v2_alt 294348 167 + 729520 TGCGGGGTCCTTACCATGGTCAGTGAT-TTTTCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGC--CACAGGCAGACTCAGATCAGCAGAGACACATCTGACACCTGGCTGTGTAGCCCAGGCTGAGCTGCATGTGGCAATGAGCACAGAGGAGAAAT-GCAGG s panTro4.chr19 59250921 167 + 63644993 TGCGGGGTCCTTACCATGGTCAGTGAT-TTTTCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGC--CGCAGGCAGACTCAGATCAGCAGAGACACGCCTGACACCTGGCTGTGTAGCCCAGGCTGAGCTGCATGTGGCAACGAGCACACAGGAGAAAT-GCAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101208 167 + 60714840 TGCGGGGTCCTTACCATGGTCAGTGAT-TCTTCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGC--TGCAGGCAGACTCAGATCAGCAGAGACGCACCTGACACCTGGCTGTGTAGCCCAGGCTGAGCTGCGTGTGGCAATGAGCACAGAGGAGTGAT-GCAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102797286 167 - 106955855 TGTGGGGTCCTTACCATGG-CAGTCATCTCTCCAGCCCTGGAGATGCTTCAGGGAAGACAGAGGTCCATGC--TGCAGGGAGACTCAGATCAGCAGAGACGCACCTGACACCTGGCTGTGCAGCCCGGGCTGAGCTGCGTGTGGCAGTGAGCACAGAGGAGAAAT-GCAGG i nomLeu3.chr10 T 65487 I 18069 s macFas5.chr19 55218275 167 + 59248254 CGCGGGGTCCTTACCATGG-CAGTCGTCTCTCCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGC--TGCAGGCAGACCCAGGTCAGCAGAGACGCACCTGACACCGGGCTGTGCAGCCCAGGCTGAGCTGTGAGTGGCAGTGAGAACACAGGAGAAAT-GCAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47325971 167 + 51301725 CGCGGGGTCCTTACCATGG-CAGTCGTCTCTCCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGC--TGCAGGCAGACTCAGGTCAGCAGAGACGCACCTGACACCGCGCTGTGCAGCCCAGGCTGAGCTGTGAGTGGCAATGAGCACAGAAGAGAAAT-GCACG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47017917 168 + 50890351 CGCGGGGTCCTTACCATGG-CAGTCGTCTCTCCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGC--TGCAGGCAGACCCAGGTCAGCAGAAACGCACCTGACACCGGGCTGTGCAGCCCAGGCTGAGCTGTGAGTGGCAATGAGCACAGAAGAGAAATGGCAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45545886 167 + 49145316 TGTGGGGTTCTTACTTAGG-CAGTTGTCTCTTCAGCCCTGGACATGCTTCAGGGAAGATGCAGGTCCATGC--TCCAGGCAGGCTCAGATCAGCAGAGACGCATCTCACATCTGTCTGTGTAGTCCAGGCAGAGCTGTGTGTGGCCGTGGGCACAGAACAGAAAT-GCAGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19734659 156 - 122678785 ---GGGGTCCTCACCATGGACGGGG---TCCCCTGCCCCAGAGATGCTGCA--GAAGACATGGGTTCCTGCTGTGCTGTGGCGCTCATGTCAGCACAGACACATTTGTGACATCTCTGCTT-GTTCAGGTCAAGGTCACTGTGGCAAAAAGCCTAGAAGAGAAAT------ i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60111292 24405 + 64156825 I a score=80545.000000 s hg38.chr19_GL949747v2_alt 294515 42 + 729520 GAAATAGGGGAGGAAATCATGAC-CCTT-TAGTGGCCCTGGAGT s panTro4.chr19 59251088 42 + 63644993 GAGATAGGGGAGGAAATCATGAC-CCTT-TAGTGGCCCTGGAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101375 42 + 60714840 GAAATAGGGGAGGAAATCATGAC-CCTT-TAGTGGCCCTGGAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102815522 39 - 106955855 GAAATA----AAGAAATGCTGAC-TGTTCTTTTGTCTTTGGAGT i nomLeu3.chr10 I 18069 I 3 s macFas5.chr19 55218442 42 + 59248254 GAAATAGGGGAAGAAATCATGAC-CCTT-TAGTGGCCCTGGAGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326138 42 + 51301725 GAAATAGGGGAAGAAATCATGAC-CCTT-TAGTGGCCCTGGAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018085 42 + 50890351 GAAATAGGGGAAGAAATCATGAC-CCTT-TAGTGGCCCTGGAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45546053 43 + 49145316 GAAACAGGGGAAGGAAAGTTGACTTCTT-TCTTGGCACTGGATT i calJac3.chr22 C 0 I 4778 s canFam3.chr1 19734815 39 - 122678785 ---ATAGGAAAGGAAACACATCC-TCTC-TCCTGGCCCCAGAGC i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60111292 24405 + 64156825 I a score=51917.000000 s hg38.chr19_GL949747v2_alt 294557 53 + 729520 ---GT-TTTCTTTCTAAC-CA------ATAGTACTCT---CTTTCTTGTACTTCCCTTAAttttttt s panTro4.chr19 59251130 51 + 63644993 ---GT-TTTCTTTCTAAC-CA------ATAGTACTCT---CTTTCTTGTACTTCCCTTAA--ttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101417 47 + 60714840 ---GT-TTTCTTTCTAAC-CA------ATAGTACTCT---CTTTCTTGTACTTCCCttaa------t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102815564 40 - 106955855 ---GT-TTTATTTCTTCC--------------AGTTT---CCTTCTTAGACTTCCCTTCT------T i nomLeu3.chr10 I 3 C 0 s macFas5.chr19 55218484 47 + 59248254 ---GT-TTCTTTTCTAAC-CA------ATAGTACTCt---ttttcttttacttctcttaa------t i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326180 47 + 51301725 ---GT-TTCTTCTCTAAC-CA------ATAgtactct---ttttcttttacttctcttaa------t i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018127 47 + 50890351 ---GT-TTCTTTTCTAAC-CA------ATAGTACTCt---ttttcttttacttctcttaa------t i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45550874 43 + 49145316 ---GT-TTTCTTTATG---CA------AAAATGTTC----CCTTCACGAACTTCTCCTTA------- i calJac3.chr22 I 4778 C 0 s canFam3.chr1 19734854 57 - 122678785 ATGGTATTTCTTTCTATCACAGCTTGCATGGACTTCTTTATTTTCCTGGACTTTTCT---------- i canFam3.chr1 C 0 I 12007 e rheMac3.chr19 60111292 24405 + 64156825 I a score=40182.000000 s hg38.chr19_GL949747v2_alt 294610 40 + 729520 tttttttttt--tttttttGCAACAGCGTCCACCTCCACCCC s panTro4.chr19 59251181 40 + 63644993 tttttttttt--tttttttGCAACAGCGTCCACCTCCATCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101464 40 + 60714840 tttttttttt--tttttttGCAACAGTGTCCACCTCCACTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102815604 35 - 106955855 TTTTTTCTTC--GTATTTTTTAATAGTGTTCA-----GGTCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55218531 41 + 59248254 tttttttttgt-tttttttGCAACAGAGTCTACTTCCACCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326227 42 + 51301725 tttttttttttgtttttttgcaacagagtctACTTCCACCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018174 40 + 50890351 tttttttttg--ttttcttGCAACAGAGTCTACTTCCACCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45550917 29 + 49145316 ------------GT-CGTCACCACAGCCTCCACCTCCATCTC i calJac3.chr22 C 0 T 41291 s canFam3.chr1 102773387 21 + 122678785 -------------------TTGATGTTATTTACT--CACCCT i canFam3.chr1 I 1004 C 0 e rheMac3.chr19 60111292 24405 + 64156825 I a score=82731.000000 s hg38.chr19_GL949747v2_alt 294650 57 + 729520 ACCTCCAGTAACA--AACCTCTGAATCTTTTCTGCCTCCACTGTGCC--------------TTCTGTTTCTTT- s panTro4.chr19 59251221 57 + 63644993 ACCTCCAGTAACA--AACCTCTGAATCGTTTCTGCCTCCACTGTGCC--------------TTCTGTTTCTTT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101504 57 + 60714840 ACCTCCAGTAACA--AACCTCTGAATCGTTTCTGCCTCCACTGTGCC--------------TTCTGTTTCTTT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102815639 73 - 106955855 CCCTCCCTTAAAAGTAACCTCTGGGTCATTCCTGCCTCCTCGGCTTCCCTCCGACCCCCAGCCCCGCTTCCTG- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55218572 56 + 59248254 ACCTCC-GGAACA--AACCTCTGAATCATTTCTGCCTCCACTGTGCC--------------TTTTGTTTCTTT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326269 57 + 51301725 ACCTCCAGGAACA--AACCTCTGAATCATTTCTGCCTCCACtgtgcc--------------ttttgtttcttt- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018214 57 + 50890351 ACCTCCAGGAACA--AACCTCTGAATCATTTCTGCCTCCACTGTGCC--------------TTTTGTTTCTTT- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102773408 56 + 122678785 --TCTTGGGAACA--CTCCTGTGAGTCCTTCCTGGGTCATCAGTGCC--------------CCCTTGTTCCTAT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45550946 41291 + 49145316 T e rheMac3.chr19 60111292 24405 + 64156825 I a score=7200.000000 s hg38.chr19_GL949747v2_alt 294707 2 + 729520 GG s panTro4.chr19 59251278 2 + 63644993 GG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101561 2 + 60714840 GG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102815712 2 - 106955855 GG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55218628 2 + 59248254 GG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326326 2 + 51301725 gg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018271 2 + 50890351 GG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45509655 2 + 49145316 GG i calJac3.chr22 T 41291 C 0 s canFam3.chr1 102773464 2 + 122678785 GG i canFam3.chr1 C 0 T 11772 e rheMac3.chr19 60111292 24405 + 64156825 I a score=3608.000000 s hg38.chr19_GL949747v2_alt 294709 2 + 729520 GC s panTro4.chr19 59251280 2 + 63644993 GC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101563 2 + 60714840 GC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102815714 2 - 106955855 GC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55218630 2 + 59248254 GT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326328 2 + 51301725 gT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018273 2 + 50890351 GT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45509657 2 + 49145316 GC i calJac3.chr22 C 0 C 0 e canFam3.chr1 102773466 11772 + 122678785 T e rheMac3.chr19 60111292 24405 + 64156825 I a score=84380.000000 s hg38.chr19_GL949747v2_alt 294711 48 + 729520 TTCCCTCTATACCTCAATCCATGTTC--------AACATTTTCGGAGTAATTACTT s panTro4.chr19 59251282 48 + 63644993 TTCCCTCTATACCTCAATCCATGTTC--------AACATTTTCGGAGTAATTACTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101565 48 + 60714840 TTCCCTCTACACCTCAATCCGTGTTC--------AACATTTTCAGAGTAATTACTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102815716 48 - 106955855 ATTCCCCTGCATCTCAGTCTGCCTTC--------AAGGTTTTGGGAACAAGTACTT i nomLeu3.chr10 C 0 I 48280 s macFas5.chr19 55218632 48 + 59248254 TTCCCTCCACACCTCAATCCAAGTTC--------AACATTTTCAGAGTAATTACTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326330 48 + 51301725 TTCCCTCTACACCTCAATCCAAGTTC--------AACATTTTCAGAGTAATTACTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018275 48 + 50890351 TTCCCTCTACACCTCAATCCAAGTTC--------AACATTTTCAGAGTAATTACTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45509659 48 + 49145316 ATTCTCCTGCATCTCAGTCTGGATTA--------AAGGGTTTGGGAACAGGTACTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19746918 55 - 122678785 CATCCTCTCCATC-CATCCTGGGGTCCTGTCTGTAAGCTGTATGGAGCACATATTT i canFam3.chr1 I 12007 C 0 e rheMac3.chr19 60111292 24405 + 64156825 I a score=8512.000000 s hg38.chr19_GL949747v2_alt 294759 6 + 729520 AGGCTT------- s panTro4.chr19 59251330 6 + 63644993 AGGCTT------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101613 6 + 60714840 AGGCTT------- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55218680 6 + 59248254 AGGCTT------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326378 6 + 51301725 AGgctt------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018323 6 + 50890351 AGGCTT------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45509707 6 + 49145316 AGTCTT------- i calJac3.chr22 C 0 I 41390 s canFam3.chr1 19746973 12 - 122678785 -GGTTTAGAGCTC i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102815764 48280 - 106955855 I e rheMac3.chr19 60111292 24405 + 64156825 I a score=52341.000000 s hg38.chr19_GL949747v2_alt 294765 41 + 729520 TGTTTT----AAAATTTTCATTC-TTATGTATCTATTTATTTTTTA s panTro4.chr19 59251336 41 + 63644993 TGTTTT----AAAATTTTCATTC-TTATGTATCTATTTATTTTTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101619 41 + 60714840 TGTTTT----AAAATTTTCATTC-TTATGTATCTATTTATTTTTTA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55218686 41 + 59248254 TGTTTT----GAAatttttattc-ttatgtatctatttatttttta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326384 37 + 51301725 tgtttt----gaaatgtttattc-ttatgtatc----tatttttta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018329 41 + 50890351 TGTTTT----GAAatttttattc-ttatgtatctatttatttttta i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19746985 46 - 122678785 TGATTTTGAAGAAAAACTTATCCTTTATCTAAATATTCATCTATTA i canFam3.chr1 C 0 T 16301 e calJac3.chr22 45509713 41390 + 49145316 I e nomLeu3.chr10 102815764 48280 - 106955855 I e rheMac3.chr19 60111292 24405 + 64156825 I a score=64654.000000 s hg38.chr19_GL949747v2_alt 294806 51 + 729520 ATTTTTGTGGGTACATTACTTAGGTTTGGGCTCTGGTTTGCTGAGTGGGGA s panTro4.chr19 59251377 51 + 63644993 ATTTTTGTGGGTACATTACTTACGTTTGGGCTCTGGTTTGCTGAGTAGGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101660 51 + 60714840 ATTTTTGTGGGTACATTACTTAGGTTTGGGCTCTGGTTTGCTGAGTGGGGA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55218727 51 + 59248254 attttTGTGGGTACATTACTTAGATTTGGGCTCTGGTTTGCGGAGAGGGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326421 51 + 51301725 atttttgtgggtacattaCTTAGGTTTGGGCTCTGGTTTGCGGAGAGGCGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018370 51 + 50890351 attttTGTGGGTACATTACTTAGGTTTGGGCTCTGGTTTGCGGAGAGGTGA i chlSab2.chr6 C 0 I 15 e canFam3.chr1 19747031 16301 - 122678785 T e calJac3.chr22 45509713 41390 + 49145316 I e nomLeu3.chr10 102815764 48280 - 106955855 I e rheMac3.chr19 60111292 24405 + 64156825 I a score=2619.000000 s hg38.chr19_GL949747v2_alt 294857 13 + 729520 GTTGATTTCTTTC- s panTro4.chr19 59251428 13 + 63644993 GTTGAtttctttc- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101711 13 + 60714840 GTTGATTTCTTCC- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55218778 11 + 59248254 ---CAACTCTCTCA i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47326472 11 + 51301725 ---CAACTCTCtca i papAnu2.chr19 C 0 I 4 e canFam3.chr1 19747031 16301 - 122678785 T e calJac3.chr22 45509713 41390 + 49145316 I e nomLeu3.chr10 102815764 48280 - 106955855 I e chlSab2.chr6 47018421 15 + 50890351 I e rheMac3.chr19 60111292 24405 + 64156825 I a score=47664.000000 s hg38.chr19_GL949747v2_alt 294870 55 + 729520 Tttctttctttc---tttccttttttttttttttgagaccgagtctcgctctgtcgcc s panTro4.chr19 59251441 53 + 63644993 tttctttctttc---tttc--tttttgtttttttgagaccgagtctcgctctgtcgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101724 49 + 60714840 tttttttttttt---------tttttttttttttgagacagagtctcactctgttgcc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55218793 53 + 59248254 tttctttctttc---tttt--tttttttttttctgagatggaatcttgacctgtcacc i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47326487 51 + 51301725 tttctttctttc-----tt--tttttttttttctgagatggaatcttgacctgtcacc i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 47018436 56 + 50890351 TTTCtttctttcttttttt--tttttttttttctgagatggaatcttgacctatcacc i chlSab2.chr6 I 15 C 0 e canFam3.chr1 19747031 16301 - 122678785 T e calJac3.chr22 45509713 41390 + 49145316 I e nomLeu3.chr10 102815764 48280 - 106955855 I e rheMac3.chr19 60111292 24405 + 64156825 I a score=506983.000000 s hg38.chr19_GL949747v2_alt 294925 290 + 729520 caggctggagtgcaatggcgctatctcggctcactgcaagctccacctcccgggttcataccattctcctgcctcagcctcccgagtagctgggactacaggcgtccgccaccacgcccggctaatttttttgtatttttattagagacagggtttcaccatgttagccaggatggtctcgatctcctgacctcatgatccgcctacctcggcctcccaaagtgctgggattacaggcgtgagccactgcg-cccggcTGGTggggagttgatttctatgtaattcccgat s panTro4.chr19 59251494 291 + 63644993 caggctggagtgcaatggcgctatctcggctcactgcaagctccgcctcccgggttcataccattctcctgcctcagcctcccgagtagctgggactacaggcgtccgccaccacgcccggctaatttttttgtatttttattagagacagggtttcaccatgttagccaggatggtctcgatctcctgacctcatgatccgcctatctcggcctcccaaagtgctgggattacaggcgtgagccactgcgccccggccAGTGGGGAGTTGATTTCTATGTAATTCCTGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101773 290 + 60714840 caggctggagtgcagtggcgcaatcttggctcactgcaagctctgcctcccaggttcatgccattctcctgcctcagcctcccgagtagctgggactacaggcatccgccaccatgcctggctaatttttttgtatttttattagagacagggtttcaccatgttagccaggatggtctcgatctcctgacctcatgatccacccgcgtcagcctcccaaagtgctgggattacaggcgtgagccaccgca-cccggccAGTGGGGAGGTGATTTCTATGTCATtcctgat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102864044 289 - 106955855 caggctggagtgcagtggcgcaatctcggctcactgcaagctccgcctcccaggttcacgccattctcctg-ctcagcctcccgagcagctgggactacaggcatccgccaccacgcccggctattttttttgtacttttattagagacagggtttcaccatgttagccaggatggtcttgatctcttgaccttatgatacactcgcctcagcctcccaaagtgctgggattacaggcgtgagccactgcg-cccggccAGTGGGGAGTTGATTTCTATGTAATtcctgat i nomLeu3.chr10 I 48280 C 0 s macFas5.chr19 55218846 290 + 59248254 caggctagagtgcagtggcacaatcttggcacactgcaagctccacctcccgggttcacgccattctcctacctcagcttcccgagcagctgggactacaggtgcccaccaccacgcccggctactttttttgtatttttattagagacggggtttcaccgtgttagctaggatggtcttgatctcctgacctcatgatccgtccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccaca-cccagccAGTggggaattgatttctatgtaattcctgat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326538 290 + 51301725 caggctagagtgcagtggcacaatcttggcacactgcaagctccacctcccgggttcacgccattctcctgcctcagcttcccgagcagctgggactacaggtgcccaccaccacgcctggctaatatttttgtatttttattagagacagggtttcaccgtgttagctaggatggtcttgatctcctgacctcatgatccgtccgcctcggcctcccaaagtgctgggattacaggggtgagccaccaca-cccagccagtggGGAATTGATTTCTATGTAATTCCTGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018492 289 + 50890351 caggctggagtgcagtggcgcaatcttggcacactgcaagctccacctcccgggttcacgccattctcctgcctcagcttcccgagcagctgggactacaggca-ccaccaccacgcctggctaaattttttgtatttttattagagacggggtttcaccgtgttagccaggatggtcttgatctcctgaccttgtgatccgccctcctcagcctcccaaagtgctaggattacaggcatgagccactgca-cccagccAGTggggaattgatttctatgtaattcctgat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19747031 16301 - 122678785 T e calJac3.chr22 45509713 41390 + 49145316 I e rheMac3.chr19 60111292 24405 + 64156825 I a score=402554.000000 s hg38.chr19_GL949747v2_alt 295215 204 + 729520 tattatctacggcttgtgtgatcttgggcagtactgtctcatctctgagcctcagtttccctgtgtgGAGCCTGTTGTCATGAACCTCACTCATCACAGCGGATGTGGGGGTCAGCCGTGCTTGGGTCATGGGAGAGGCTCAATCACGGTTAATGTCT-------------------------------------------------AGACTAGATTAAGACATGAGGGGTTGGGACATGAGAGGATTCTGGT s panTro4.chr19 59251785 204 + 63644993 TATTATCTATGGCTtgtgtgatcttgggcagtactgtctcatctctgagcctcagtttccctgtgtgGAGCCTGTTGTCATGAACCTCACTCATCACAGCGGATGTGAGGGTCAGCCGTGCTTGGGTCATGGGAGAGGCTCAATCATGGTTAATGTCT-------------------------------------------------AGACTAGATTAAGACATGAGGGGTTGGGACATGAGAGGATTCTGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56102063 253 + 60714840 tattatctacggcttgtgtgatcttgggcagtactgtctcatctctgagcctcagtttccctgtgtggagcctgttgtcatgaacctctctcatcacagcggttgtgaggGCCAGCCATGCTTGGGTCATGGGACAGGCTCAGTCACGGTTCATGTCTAGACTAGATTAAGACATGAGGGGTTGGGACATGAGAGGATTCTGGTTTCAGACTAGATTAAGACATGAGGGGTTGGGACATGAGAGGATTCTGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102864333 203 - 106955855 tattatctatggattgtgtgatcttgggcagtactgtctcatctctgagcctcagtttccctgtgtggagcctgttgtcatgaacctcact-atcacagcggatgtgagggtcaTCCGTGCTTGGGTCATGGGAGAGGCTAAATCACGGTTAATTTCT-------------------------------------------------AGACTAGATTAAGACATGAGGGGTTGGGACATGAGAGGATTCTGGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55219136 204 + 59248254 tattatctatggcctgcgtgatcttgggcagtactacctcgtctctgagcctcagtttccctgtgtgGAGCCTGCTGTCATGAACCTCACTCATCACAGCGGATGTGAGGGCCAGCGGCACTTGGCTCATGGCAGAGACTCAATCACAGTTAATTTCT-------------------------------------------------AGACTAGATTAAGACATGAGGGGTGGGGACATGAGAGGACTCCGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326828 204 + 51301725 TATTATCTATGGCCTGCGTGATCTTGGGCAGTACTActtcatctctgagcctcagtttccctgtgtgGAGCCTGCTGTCATGAACCTCACTCATCACAGCGGATGTGAGGGCCAGCGGCGCTTGGCTCATGGCAGAGACTCAATCACAGTTAATTTCT-------------------------------------------------AGACTAGATTAAGACATGAGGGGTGGGGACATGAGAGGACTCCGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018781 204 + 50890351 tattatctatggcctgcgtgatcttgggcagtactacctcgtctctgagcctcagtttccctgtgtgGAGCCTGTTGTCATGAACCTCACTCATCACAGCAGATGTGAGAGCCAGCGGCGCTTGGCTCATGGCAGAGACTCAATCACAGTTAATTTCT-------------------------------------------------AGACTAGATTAAGACATGAGGGGTGGGGACATGAGAGGACTCTGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45551103 198 + 49145316 TAAcacctcctgcccgtgtgacctt-ggctgtgacctcccatttctgagcctgagtttcctcatttgAAGCC---TGTCATGAACTCCATTCATCACAGCGGAGCT--GGGTCATTGGAGTCTGGGAGCTGCACGGGGCTCAGCCACGGGTGATTTCC-------------------------------------------------AGAGCAGGTGAAGACATGAGGGGCGGGGACATGAAGGGATGCTGGT i calJac3.chr22 I 41390 I 10372 e canFam3.chr1 19747031 16301 - 122678785 T e rheMac3.chr19 60111292 24405 + 64156825 I a score=482755.000000 s hg38.chr19_GL949747v2_alt 295419 281 + 729520 TTCAGTCTCtatgattatgtcacagaggtgcagaaaaagcatttgataaaatcctgcatcccttcatgataaaaattcccaacaaacaaggtacagagggacatacctcaaaatactaaaggcgataggtgacgaaatcccagccaatatcgcaaacagggaaaaatagaaagcattccccctaagaactggagcatgacaaagatgtgcactgtcaccactc---ttcaacgtagtactggaggtccttg-ccagagcaatcaggcaagacaaagaaataaaac s panTro4.chr19 59251989 281 + 63644993 TTCAGTCTCtatgattatgtcacagaggtgcagaaaaagcatttgataaaatcctgcatcccttcatgataaaaattctcaacaaacaaggtacagagggacatacctcaaaatactaaaggcgataggtgacgaaatcccagccaatatagcaagcagggaaaagtagaaaacattccccctaagaactggagcatgacaaagatgtgcactgtcaccactc---ttcaacgtagtactggaggtcctcg-ccagagcaatcaggcaagacaaagaaataaaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56102316 282 + 60714840 TTCAGTCTCtatgattatgtcatagaggtgcagaaaaagcatttgataaaatcctgcatcccttcatgataaaaattctcaacaaacaaggcacagagggacatacctcaaactactaaaggccaaaggtgatgaaatcccagccaatatagcaaacagggaaaagtagaaagcattccccctaagaactggagcacgacgaagatgtgcatcatcaccactc---ttcagcgtagtactggaggtcctcgcccagagcaatcaggcgagacaaagaaataaaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102864536 281 - 106955855 TTCAGTCTCtatgattatgtcatagaggtgcagaaaaagcatttgataaaatcctgccttccttcgtgataaaaattctcaacaaacaaggcacagagggacatacctcaaaatactaaaggccataggtgacgaaatcccagccaatacagcaaacagggaaaagtagaaagcactccccctaagaactggggcacgacgaggatgtccactgtcaccactc---ttcagcgtagtactggaggtccttg-ccagagcaatcaggcaagacaaaggaataaaac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55219340 284 + 59248254 TTCAGTCTCtatgattatgtcatagagatgcagaaaaagcatttggtaaaatcctgcatcccttcaggataaaaattctcaacaaacaaggcatagaaggacatacctcaaaatactaaagaccataggcgacgaaatcacagccaatagagcaaacagggaaaagcagaaagctttccccctaagaactggagtaagacaaagatgtccgctctcaccactcggattcgacgtagtgctggaggtcctcg-ccggagcaatcaggcaagacaaagaaataacac i macFas5.chr19 C 0 I 2987 s papAnu2.chr19 47327032 284 + 51301725 TTCAGTCTCTATGATTATGTCATAGAGATGCggaaaaagcatttggtaaaatcCTGCATCTCTTCaggataaaaattctcaacaaacaaGGCATAGAAGGACATACCTCAAAATACTAAAGACCATAGGCGACGAAATCACAGCCAATATAGCAAACAGGGAAAAGCAGAAAGCTTTCCCCCTAAGAACTGGAGTAAGACAAAGATGTCCGCTCTCACCACTCGGCTTCAACGTAGTGCTGGAGGTCCTCG-Ccggagcaatcaggcaagacaaagaaataacac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018985 283 + 50890351 TTCAGTCTCtatgattatgtcatagagatgca-aaaaagcatttggtaaaatcctgcatctcttcaggataaaaattctcaacaaacaaggcatagaaggacatacctcaaaatactaaagaccataggcgacgaaatcacagccaatatagcaaacagggaaaagcagaaagcattccccctaagaactggagtaagacaaagatgtccgctctcaccactctgactcaacatagtgctggaggtcctcg-ccggagcaatcaggcaagacaaagaaataaaac i chlSab2.chr6 C 0 I 8495 e canFam3.chr1 19747031 16301 - 122678785 T e calJac3.chr22 45551301 10372 + 49145316 I e rheMac3.chr19 60111292 24405 + 64156825 I a score=3350.000000 s hg38.chr19_GL949747v2_alt 295700 5 + 729520 acatc s panTro4.chr19 59252270 5 + 63644993 acatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56102598 5 + 60714840 acatc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102864817 5 - 106955855 acatc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47327316 5 + 51301725 ttatc i papAnu2.chr19 C 0 I 2977 e canFam3.chr1 19747031 16301 - 122678785 T e calJac3.chr22 45551301 10372 + 49145316 I e chlSab2.chr6 47019268 8495 + 50890351 I e macFas5.chr19 55219624 2987 + 59248254 I e rheMac3.chr19 60111292 24405 + 64156825 I a score=389147.000000 s hg38.chr19_GL949747v2_alt 295705 773 + 729520 taaattgg---aaaaaaaaaaagtgaaattatttctgttcgctgatgatattatcttatacctcaaaaaccctaaagactcagccaaaacactcttagatttgataaagaaatgcagtaaagtttcaggatatagaatcaaagtacagaaatcagtagcatttctgtactccaataatgacgaagctgagaaccaagtcaaggaggcaatcccatggacagtgggtgcacaaaaataaaacacctgggaatatatttaaccaaggaggtgaaagatttctacaaggaaaacttcaaaccagtgatgaaagaaattgtagaagacacaaacagatggaaaaacatcccattctcataaatcagaataattactatgattaaaatgaccacattgcccaaagcaatctacagatttaatgcagtccttacaaaaataccttcatttttcacagacttagaaaaagaaaccttaaaagttatattgagcc-aaaaaaagagcccaaacagccatagcaatcctaagcaaaaagagcaaagctagagacatcacattaactgactcaaagtttacaaggctatagtaaccaaaagagcatgacactggtataaaaatagacatataggccagttgcagtggctcacgcctctaatcccagcactttgggaggctgaggcaggtggattacgag--gtcaggagttcaagaccagcttggccaacatggtgaaaccccgtctctgctaaaaatacaaaagaattagccaggtgtggtgATGGGT s panTro4.chr19 59252275 773 + 63644993 taaattgg---aaaaaaaaaaagtgaaattatttctgttcgctgatgatattatcttatacctcagaaaccctaaagactcagccaaaacactcttagatttgataaagaaatccagtaaagtttcaggatatagaatcaaagtacagaaatcagtagcatttctgtactccaataatgacgaagctgagaaccaagtcaaggaggcaatcccgtggacagtgggtgcacaaaaataaaacacctgggaatatatttaaccaaggaggtgaaagatttctacaaggaaaacttcaaaccagtgatgaaagaaattgtagatgacacaaacagatggaaaaacatcccattctcataaatcagaataattactatgattaaaatgaccacactgccccaagcaatctacagatttaatgcagtccttacaaaaataccttcatttttcacagacttagaaaaagaaaccttaaaagttatattgagcc-aaaaaaagagcccaaacagccatagcaatcctaagcaaaaagagcaaagctagagacatcacattaactgactcaaagtttacaaggctatagtaaccaaaagagcatgacactggtataaaaatagacatataggccagttgcagtggctcacgcctctaatcccagcactttgggaggctgaggcaggtggattacgag--gtcaggagttcaagaccagcttggccaacatggtgaaaccccgtctctgctaaaaatacaaaagaattagccaggtgtggtgATGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56102603 772 + 60714840 taaattgg-----aaaaaaaaagtgaaattatttctgttcg-tgatgatattatcttatacctcaaaaaccataaagactcagccaaaacactcttagatttgataaagaaatccagtaaagtttcaggatataaaatcaatgtacagaaatcagtagcatttctgtacaccaataatgacgaagctgagaaccaagtcaagaaggcaatcccattgacagtgggtgcacaaaaataaaatacctgggaatatatttaaccaaggaggtgaaagatttctacaaggaaaacttcaaaccagtgatgaaagaaattgtagatgacacaaacagatggaaaaatatcccattctcataaatcagaataattactatgattaaaatgagcacactgcccaaagcaatctacagatttaatgcaatccttacaaaaataccttcatttttcacagacttagaaaaagaaaccttaaaagttacattgagcc-aaaaaaagagcccaaacagccatagcaatcctaagcaaaaagagcaaagctagagacatcacattaactcactcaaagtttacaaggctatactaaccaaaaaagcatgacactggtataaaaatacacatacaggctgggtgcagtggctcatgcctctaatcccagcactttgggaggctgaggcaggtggattatgaggtgtcaggagttcaagaccagcttggccaacatggtgaaaccccgtctctgctaaaaaaacaaaaaaattagccaggcatggtgatgggt i ponAbe2.chr19 C 0 I 2730 s nomLeu3.chr10 102864822 773 - 106955855 taaattggaaaaaaaaaaaaaagtgaaattatttctgtttgctgatgatgttatcttatacctcaaaaaccctaaagactcagccaaaacactcttagatttgataaagaaatccagtaaagtttcaggatataaaatcaatgtacagaaatcagtagcatttctgtacgataat--tgatgaagctgagaacccagtcaag-aggcaatcccattgactgtgggtacacagaaataaaatacctgggaatgtatttaaccaaggatgtgaaagatttctacaaggaaaacttcaaaccagtgatgaaagaagttgtagatgacacaaacagatggaaaagcgtcgcgttctcat-agtcataataattactgtgattacagagaccacactgcccaaagcaatccacagatttaatgttgtccttacacaaataccatcatctttcccagacttagagagagaaacctgaaaagttatattgagtcaaaaaaaagagcccaaacagccatagcaatcctaagcaaaaagagcaaagctagagacatcacattaattgactcaaagtttacaagcctatactaaccaaaagagcatgacactggtataaaaatagacatataggccgggtgcagtggctcacgcctctaatcccagcactctgggaggccgaggcaggtggattacgag--gtcaggagttcaagaccagcttggccaacatggtgaaaccctgtctctgctaaaaatacaaaaaaagtagacaggcgtggtgatgggt i nomLeu3.chr10 C 0 I 3017 e canFam3.chr1 19747031 16301 - 122678785 T e calJac3.chr22 45551301 10372 + 49145316 I e chlSab2.chr6 47019268 8495 + 50890351 I e papAnu2.chr19 47327321 2977 + 51301725 I e macFas5.chr19 55219624 2987 + 59248254 I e rheMac3.chr19 60111292 24405 + 64156825 I a score=164273.000000 s hg38.chr19_GL949747v2_alt 296478 317 + 729520 gatctcaaattaacaacctaacatcacaactaaaagaactagagaaTAATCCgcccggcgcggtggctcacgcctgtaattccagcactttgggaggctgaggcgggtggatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaaccctgtctctactgaaaacacaaaaaattagccaggcgtggtggcgggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggtggagcttgcagtgagccgagatcacgccactgcactccagcctgggagacagC s panTro4.chr19 59253048 317 + 63644993 gatctcaaattaacaacctaacatcacaactaaaagaactacagaagAATCAgcccggtgcggtggctcacgcctgtaattccagcactttgggaggctgaggcgggtggatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaaccccgtttctactgaaaacacaaaaaattagccaggcgtggtggcgggcacctgtagtcccagctactcgggaggctgaggcaggagaacggcgtgaacccgggagggggagcttgcaatgagccgagatcacgccactgcactccaggctgggagacagC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56106105 317 + 60714840 gatctcaaattaacaacctaacatcacaactaaaagaactagggaagAATCagcctggtgtggtggctcacacgtgtaattccagcactttgggaggctgaggcgggtggatcacaaggtcaggagatcgagaccatcttggctaacatggtgaaaccctgtctctactgaaaacacaaaaaattagccgggcatgttggcgggcgcctgtagtcccagctactcgagaggctgaggcaggagaatggcgtgaacctgggaggcggagcttgcagtgagctgagatcacaccactgcactccagcctgggagacagC i ponAbe2.chr19 I 2730 C 0 s nomLeu3.chr10 102868612 314 - 106955855 gatctcaaattaacaacctaacatcacaactaaaagagctagagaagAATCAgcctggtgcagtggctcacgcctgtaattccagcactttgggaggc---ggcaggtggatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaatcctgtctctactgaaaacacaaaaaattagccgggcgtgttggcgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacctgggaggcggagcttgcagtgagccgagattgccccactgcactccagcctgggcgacagC i nomLeu3.chr10 I 3017 C 0 e canFam3.chr1 19747031 16301 - 122678785 T e calJac3.chr22 45551301 10372 + 49145316 I e chlSab2.chr6 47019268 8495 + 50890351 I e papAnu2.chr19 47327321 2977 + 51301725 I e macFas5.chr19 55219624 2987 + 59248254 I e rheMac3.chr19 60111292 24405 + 64156825 I a score=910.000000 s hg38.chr19_GL949747v2_alt 296795 1 + 729520 A s panTro4.chr19 59253365 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56106422 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102868926 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47330298 1 + 51301725 A i papAnu2.chr19 I 2977 C 0 e canFam3.chr1 19747031 16301 - 122678785 T e calJac3.chr22 45551301 10372 + 49145316 I e chlSab2.chr6 47019268 8495 + 50890351 I e macFas5.chr19 55219624 2987 + 59248254 I e rheMac3.chr19 60111292 24405 + 64156825 I a score=5749.000000 s hg38.chr19_GL949747v2_alt 296796 6 + 729520 ATTGGA s panTro4.chr19 59253366 6 + 63644993 ATTGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56106423 6 + 60714840 ATTGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102868927 6 - 106955855 ATTGGC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55222611 6 + 59248254 ATTGCC i macFas5.chr19 I 2987 C 0 s papAnu2.chr19 47330299 6 + 51301725 ATTGGC i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19747031 16301 - 122678785 T e calJac3.chr22 45551301 10372 + 49145316 I e chlSab2.chr6 47019268 8495 + 50890351 I e rheMac3.chr19 60111292 24405 + 64156825 I a score=613536.000000 s hg38.chr19_GL949747v2_alt 296802 254 + 729520 ATGCAATTTAGAAATAAAGTGAAATTTCAACTTTTGTGTGAGTTATGTACATTTTATTAGTAAATTAGAGGGGATCAATTGAAAATAATTGGAATTAAGAAATTCTGTAGTAAGTTGGTATAAAATAAAGTAAATGAACTCAAACCAATTACTGTATCATGTATACCTAGCTTTTATTTATAAGGAATCAAAGACCTCATTTACAGATTATTCAAGTGATTGAATAATTGTTTAAATTGAAATAAATATATAAA s panTro4.chr19 59253372 254 + 63644993 ATGCAATTTAGAAATAAAGTGAAATTTCAACTTTTGTGTGAGTTATGTACATtttattagtaaattagaggggatcaattgaaaataattggaattaagaaattctgtagtaagttggtataaaataaaataaatgaactcaaaccaattactgtatcatgtatacctagcttttatttataaggaataaaagacctcatttacagattattcaagtgattgaataattgtttaaattgaaataaatatataaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56106429 253 + 60714840 ATGCAATTTAGAAATACAGTGAAATTTCAACTTTCTTGTGAGTTATGTACATTTTATTAGTAAATTAGA-GGGATCAATTGAAAATAATTGGAATTAAGAAATTCTGTAGTAAGTTGGTATAAAATAAAATAAATGTACTCAAACCAATTACTGTATCATGTATACCTAGCTTTTATTTATAAGGAATCAAAGGCCTCATTTACAGATTATTCAAGTGATTGAATAATTGTTTAAACTGaaataaatatataaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102868933 254 - 106955855 ATGCAATTTAGAAATAAAGTGAAATTTCAACTTTCTTGTGAGTTATGTACATTTTATTAGTAAATTAGAGGGGATCAATTGAAAATAATTGGAATTAAGAAATTCTGTAGGAAGTTGGTATAAAATAAAATAAATGTACTCGAACCAATTACTCTATCATGTATACCTAGCTTTTATTTACAAGGAATCAAAGGCCTCATTTACAGATTATTCAAGTGATTGAATAATTGTTTAACTTGAAATAAATATATAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60135697 253 + 64156825 ATGCAATTTAGAAATAAAGTGAAATTTCAACTTTCTTGTGAGTTATATATATTTTATTAGTAAATTAGAGGGGATCAATTGAAAATAATTGGAATTAAGAAATTCTGTAGTAAG-TGGTATAAAATAAAATAAATGTACTCAAACCATTTACTGTATCATGTGTACCTAGCTTTTATTTATAAGGAATCAAAGGCCTCATTTACAGATTATTAAAGTGATTGAATAATTGCTTACATTGAAATAAATATATAAA i rheMac3.chr19 I 24405 C 0 s macFas5.chr19 55222617 253 + 59248254 ATGCAATTTAGAAATAAAGTGAAATTTCAACTTTCTTGTGAGTTATATATATTTTATTAGTAAATTAGAGGGGATCAATTGAAAATAATTGGAATTAAGAAATTCTGTAGTAAG-TGGTATAAAATAAAATAAATGTACTCAAACCATTTACTGTATCATGTGTACCTAGCTTTTATTTATAAGGAATCAAAGGCCTCATTTACAGATTATTAAAGTGATTGAATAATTGCTTACATTGAAATAAATATATAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47330305 254 + 51301725 ATGCAATttagaaataaagtgaaatttcAACTTTCTTGtgagttatatatattttattagtaaatTAGAGGGGATCAATTGAAAATAATTGGAATTAAGAAATTCTGTAGTAAGttggtataaaataaaataaatgtactcAAACCAATTACTGTATCATGTATACCTAGCTTTTATTTATAAGGAATCAAAGACCTCATTTACAGATTATTAAAGTGATTGAATAATTGTttacattgaaataaatatataaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47027763 254 + 50890351 ATGCAATTTAGAAATAAAGTGAAATTTCAATTTTCTTGTGAGTTATGTATATTTTATTGGTAAATTAGAGGGGATCAATTGAAAATAATTGGAATTAAGAAATTCTGTAGTAAGTTGGTATAAAATAAAATAAATGTACTCAAACCATTTACTGTATCATGTGTACCTAGCTTTTATTTATAAGGAATCAAAGGCCTCATTTACAGATTATTAAAGTGATTGAATAATTGTTTACATTGAAATAAATATATAAA i chlSab2.chr6 I 8495 C 0 e canFam3.chr1 19747031 16301 - 122678785 T e calJac3.chr22 45551301 10372 + 49145316 I a score=39012.000000 s hg38.chr19_GL949747v2_alt 297056 19 + 729520 ATTCTTATAAATAAAATTT s panTro4.chr19 59253626 19 + 63644993 attcttataaataaaattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56106682 19 + 60714840 attcttataaataaaattt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102869187 19 - 106955855 ATTCTTATAAATAAAATTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60135950 17 + 64156825 AGTC--ATAAATAAAATTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55222870 17 + 59248254 AGTC--ATAAATAAAATTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47330559 19 + 51301725 agtcgtataaataaaattt i papAnu2.chr19 C 0 I 321 s chlSab2.chr6 47028017 19 + 50890351 ATTCTTATAAATAAAATTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45561673 17 + 49145316 atctctaaaaataaaat-- i calJac3.chr22 I 10372 C 0 e canFam3.chr1 19747031 16301 - 122678785 T a score=151688.000000 s hg38.chr19_GL949747v2_alt 297075 67 + 729520 CAAGACACTTCTTAAGTTCATCAATAAACCTCAATTTTAAAAGTTTAGGATAGGAAAACTTAACATA s panTro4.chr19 59253645 67 + 63644993 caagacacttcttaagttcatcaataaacctcaattttgaaagtttaggataggaaaacttaacata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56106701 61 + 60714840 CAAGACACTTCTTAGGTTCATCAATAAACCTCAATTTTAAAATT------TAGGAAAACTTAACATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102869206 67 - 106955855 CAAGACACTTCTTAAGTTCATCAATAAACCTCAATTTTAAAAGTTTAGGATAGGAAAACTTAACATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60135967 67 + 64156825 CAAGACACTTCTTAAGTTCATCAATAAACCTCAATTTTAAAAGTTTAGGATAGGAAAACTTAACGTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55222887 67 + 59248254 CAAGACACTTCTTAAGTTCATCAATAAACCTCAATTTTAAAAGTTTAGGATAGGAAAACTTAACGTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47330899 67 + 51301725 caagacacTTCTTAAGTTCATCAATAaacctcaatttaaaaagtttaggATAGGAAAACTTCACGTA i papAnu2.chr19 I 321 C 0 s chlSab2.chr6 47028036 65 + 50890351 CAAGACACTTCTTAAGTTCATCAATAAACCTCAACTTTAAAAGTTTAGGATAGGAAAAC--AATGTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45561690 58 + 49145316 -aaaa------TCAAGttaaattataaa--ttaaaataaaaataGAAGTGCTAAAGGATTTAATGTT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19747031 16301 - 122678785 T a score=144661.000000 s hg38.chr19_GL949747v2_alt 297142 50 + 729520 AATAAGAAACTATTTTCTA---AAGCAAATATATA----------------AATGAAATC----------ATGTCCCAA s panTro4.chr19 59253712 50 + 63644993 aataagaaactattttcta---aagcaaatatata----------------aatgaaatc----------aagtcccaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56106762 50 + 60714840 AATAAGAAACTATTTCCTA---AAGCAAATATATA----------------AATGAAATC----------AAGTCCCAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102869273 50 - 106955855 AATAAGAAACTATTTTCTA---AAGCAAATATATA----------------AATGAAATC----------AAGTCCCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60136034 50 + 64156825 AATAAGAAACTATTTTCTA---AAGCAAATATATA----------------AATGAAATC----------AAGTCCCAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55222954 50 + 59248254 AATAAGAAACTATTTTCTA---AAGCAAATATATA----------------AATGAAATC----------AAGTCCCAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47330966 50 + 51301725 AATaagaaactattttcta---aagcaaatatata----------------aatgaaatc----------aagtcccaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47028101 50 + 50890351 AATAAGAAACTATTTTCTA---AAGCAAATATATA----------------AATGAAATC----------AAGTTCCAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45561748 52 + 49145316 AATAAGAAGTGACTTTCTATTTAAATGAATGCATA----------------CATTTAAT-----------GTATCTCAA i calJac3.chr22 C 0 T 37905 s canFam3.chr1 19730730 76 - 122678785 AATCACAAATTATTCTCTA---TAAAGGATATATGCATTTCATATAAACCCAATGAAATTGGAGATTTTAAAGTCCTAA i canFam3.chr1 T 16301 C 0 a score=2496324.000000 s hg38.chr19_GL949747v2_alt 297192 902 + 729520 ---ATTAAAATGATAAGTTTATATATT-------CATGTATTGCTTTAAATGTTTCAGAAGAACAGAGAG------TAACAATAGACAAGTGTGCACAGAAAAGGCAGGGTAGAAATGAATGACACACAAGCCGCGCTGTGAATAACTCCCTAACTCA-TCCAGGGAG-----CAGGTGCGTGGCCCCT----------CCTTACTCTCAGGGGTTCCCTGA---GCACAGAGGCCTTCAGGTGAGCACAGGAGGGGCGGTGTGAGGTGCACCCACA-AGTGGGGTGCTTCTCTCTAAAGGAGCAGGTCTGGGGCGGACCCCAGCCTCATCCCAGTCAGATCCCACCGAGGCCCGAGCAGCCTCCTGTCCTGTCATAAGAGGACCCAGGGACC-CCGCATGTGTGGGTGAGGGGCTTCATCCTCAGGGGCTCTTGGAAATGAGAAATAAGAGCTCCCAAGGGAGCGT---CCATCTGTCCTCTCTCCAACT-TGCTTGCCTCTCTTCCTCCTCCATCAGCCCCAGCGTCTTCCCCATG-TCTGAGTCTGG-CTGGACCCCAAATCCTCCTGATCCAGCCTGCTCTCCTTCCTCTGCTCATCACATATCCTGCAGGACAGGGTAGGGGCCTGGGAGTCATGCACAGCTGTGCTGG--------GTGTTGCTTTTAGTAGAAAATCTGAAACAG--TGTGTGATGTGTGAGAGA-GGGGAGATTCTAAA-CAGTGGGGTTTTTACAAATCTTTGCTTTCTCC-TAATACTGTGGCTTCATCTCACGAATCTCAGACCCCAACATTGATGGATACAATTACAATTACATGTACCTGCAGCTGCCTCTCCTGGC-TTTCTAACCCTTGCAACACACAGTTATTGGTAGGAGCTGACCAGGCCAAGGGAGGGCTGGGGG---ACGGCAGCAGGTCTAGGATGAGCCGCAACCCAGATGCCCCAGAAG s panTro4.chr19 59253762 902 + 63644993 ---attaaaatgataagtttatatatt-------catgtattgctttaaatgtttcagaagaacagagag------taacaatagacaagtgtgcacagaaaaggcagggtagaaatgaatGACACACAAGCCGCGCTGTGAATAATTCCCTAACTCA-TCCAGGGAG-----CAGGTGCAGGGTCCCT----------CCTTACTCTCAGGGGTTCCCTGA---GCACAGAGGCCTTCAGGTGAGCACAGGAGGGGCGGTGTGAGGAGCACCCACA-AGTGGGGTGCTTCTCTCTAAAGGAGCACGTCTTGGGTGGACACCAGCCTCATCCCAGTCAGATCCCACCAAGGCCCGAGCAGTCTCCTCTCCTGTCCTAAGAGGACCCAGGGACC-CCGCATGTGTGGGTGAGGGGCTTCATCCTCAGGGGCTCTTGGAAATGAGAAATAAGAGCTCCCAAGGGAGCAT---CCATCTGTCCTCTCTCCAACT-TGCTTGCCTCTCTTCCTCCTCCATCAGCCCCAGCATCTTCCCCATG-TGTGAGTCTGG-CTGGACCCCAAATCCTCCTGATCCAGCCTGCTCTCCTTCCTCTACTCATCATACATCCTGCAGGACAGGGTAGGGGCCTGGGAGTCATGCACAGCTGTGCTGG--------GTGTTGCTTTTAGCGGAAAATCTGAAACAG--TGTGTGATGTGTGAGAGA-GGGGAGATTCTAAA-CAGTGGGGTTTTTACAAATCTTTGCTTTCTCC-TAATACTGTGGCTTCATCTCACGAATCTCAGACCCCAACATTGATGGATACAATTACAATTACATGTACCTGCAGCTGCCTCTCCTGGC-TTTCTAACCCTTGCAACACACAGTTATTGGTAGGAGCTGACCAGGCCAAGGGAGGGCTGGGGG---ACGGGAGCAGGTCTAGGATGAGCCACAACCCAGATGCCCCAGAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56106812 897 + 60714840 ---ATTAAAACGATAAGTTTATGTATT-------TATGTATTGCTTTAAATGTTTCAGAAGAACAGAGAG------TAACAATAGACAGGTGTGCACAGAAAAGGCAGGGTAGAAATGAATGACACACAAGCCGCACTGTGAATAATTCCCTAACTCA-TCCAAGGAG-----CAGGTGCGCGGCCCCT----------CCTTACTCTCAGGGGTTCCCTGA---GCACAGAGGCCTCCAGGTGAGCACAGGAGGAGCTGTGTGAGTGGCACCCACA-GCTGGGATGCTTCTCTCTAAAGGAGCACGTCTGGGGTGGACTCCAGCCTCATCACAGTCAGATCCCACTGAGGCTGGAGCAGCCTGCTCTCTTGTCTTGAGATGGCCCAGGGACC-CCGCAGGTGTGGGTGAGGGGC-TCATACTCAGGGGCTCTTGGAAATGAGAAATGAGAGCTGCCAATAGACTGC---CCATCTGTCCTCTCTCCAACT-TGCCTGCCTCTCTTCCTCCTCCATCAGTCCCAGCATCTTCCCCACG-TCCAAGTCAGG-CTGGACCCCAAAGCCTCCTGATCCAGCCTGTTCTCCTTCCTCTACTCATCACACATCCTGCAGGACAGGGTAGGGGTCTGGGAGTCAAGCATAGCTGTGCTGG--------GTGTTGCTTTTAGTAGAAAATCTGCAACAC--TGTGTGATGTGTGAGAGA-GGGGAGATTCTAAA-CAGTGGGGTTTTTACAAATCTTTGATTTCTCA-TAATACTGTGGCTTCATCTCACGAATCTCAGACCCCAACATTGATGGATACAATTACAATTACACGTACCTGCAGCTGCCTCTCCTGGC-TTTCTAACCCTTGCA--ACACAGTTATTGGTAGGAGCCGACCAGGCCAAGGGAGGGCTGGAGA-----TGGAACAGGTCTAGGATGAGCCACAACCCAGATGCCCCagaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102869323 901 - 106955855 ---ATTAAAATGATAAGTTTACATATT-------CATGTATTGCTTTAAATGTTTCAGAAGAACAGAGAG------TAACAATAGGCAAGTGTGCACAGAAAAGGCAGGGTAGAAATGAATGACACACAAGCTGCACTGTGAATAATTCCCTAACTCA-TCCAGAGAG-----CAGGTGCACGGCCCCT----------CCTTACTCTCAGAGGTTCCCTGA---GCACAGAGGCCTTCAGGCGAGCACAGGAGGGGTGGTGTGAGGGGTACCCACA-GCTGGGGTGCTTCTCTCTAAAGGAGCAGGTCTGGGGTGGACTCCAGCCTCATCATAGTCAGATCCCATCGAGGCCGGAACAGCCTCCTCTCCTGTCCTAAGAGGACCCAGGGACC-CCGCATGTGTGGGTGAGGGGC-TCATCCTCAGGGGCTCTTGGAAATGAGAAATAAGAGCTCCCAAGAGAGTGT---CCGTCTGTCCTCTCTCCATCT-CGCCTGCCTCTTTTCCTCCTCCATCAGCCCCAGCATCTTCCCTGTG-TCCAAGTCAGG-CTGGACCCCAAATCCTCCTGATCCAGCCTGTTCTCCTTCCTCTACTCATCACACATCCTGCAGGACAGGGTAGGGGCCTGGGAGTCATGCATATCTGTGCTGG--------GTGTTGCTTTTAGCAGAAAATCTGAAACAC--TGTGTAATGTGTGAGAGA-GGGGAGATTCTAAA-CAGTGGGGTTTTTACAAATCTTTGCTTTCTTA-TAACACTATGGCTTCATCTCACGAGTCTCAGACCCCAACATTGATGGAAACAATTACAATTCCACGTACCTGCAGCTGCCTCTCCTGGCTTTTCCAACCCTTGCAACACACAGTTATTGGTAGGAGCCCACCAGGCCAAGGGAGGGCTGGAGA----CGGGAGCAGTTCTAGGATGAGCCACAACCCAGATGCCCCAGAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60136084 895 + 64156825 ---ATTAAAATGATAAGTTTATATATT-------CATGTATTGCTTTAAATGTTTCAGAAGAACAGAGAG------GAACAATAGACAAGTGTGCACGGAAAAGGAAGGGTAGAAATGAATGACACACAAGCCGTGCTGTGACTAATTTCCTAACTCA-TCCAGGGAG-----CAGGTGCACAGCCCCT----------CCTTAGTCTCAGGAGTTCCCTGA---GCACAGAGGCCTCCAGGTGAGCACAGGAGGGACCGTGTGAGCGGCACCCACA-GCTGGGGTGCTTCTCTCTAAAGGAGCAGATCTTTGGTGGACTCCAGCCTCATCACAGTCAGATCCCACCGAGGCCTGAGCAGCCTCCTTTCCTGTCCTCAGAGGACTCAGGGACC-CTGCAGGTGTGGTTGAGGGGT-TCACCCTCAGGAGCTCTTGGAAATGAGAAATAAGAGCTGCCAAGGGAGCGT---CCGTCTTTC--CTCTCCAACT-TGCCTGCCTCTCTTCCTCCTCCATCAGCCCCAGCATCTTCCCCGTG-TCCAAGTCAGG-CTGGACCCCAACTCCTCCTGACCCAGCCTGTGCTCCTTCCTCTACTCATCACCCATCTTGCAGGACAGGGTCGGGGCCTGGGAGTCATGCATAGCTGTGCTGG--------GTGTTGCTTTTAGTAGAAAATCTGAACCACTTTGTGTGATACATGAGAGA-GGGAAGATTCTAAACCAGTGGGGTTTTTACAAATCTTTGCTTTCTCC-TAATATTGTGGCTTCATCTCACGAATCTCAGACCCCAGCACTGATGGA------TACAATTACACGTACCTGCGGCTGCCTCTCCTGGC-TTTGTAACCCTTGCAACACATAGTTATTGGTAGAAGCCGACCAGGCCCAGGGAGGGTTGGAGA----CTGGGGCAGGTCTAGGATGAGCCACAACCCAGATGCCGCaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55223004 895 + 59248254 ---ATTAAAATGATAAGTTTATATATT-------CATGTATTGCTTTAAATGTTTCAGAAGAACAGAGAG------GAACAATAGACAAGTGTGCACGGAAAAGGCAGGGTAGAAATGAATGACACACAAGCCGTGCTGTGACTAATTCCCTAACTCA-TCCAGGGAG-----CAGGTGCACGGCCCCT----------CCTTAGTCTCAGGAGTTCCCTGA---GCACAGAGGCCTCCAGGTGAGCACAGGAGGGACCGTGTGAGCGGCACCCACA-GCTGGGGTGCTTCTCTCTAAAGGAGCAGGTCTTTGGTGGACTCCAGCCTCATCACAGTCAGATCCCACCGAGGCCTGAGCAGCCTCCTTTCCTGTCCTCAGAGGACTCAGGGACC-CTGCAGGTGTGGGTGAGGGGT-TCACCCTCAGGAGCTCTTGGAAATGAGAAATAAGAGCTGCCAAGGGAGCGT---CCGTCTTTC--CTCTCCAACT-TGCCTGCCTCTCTTCCTCCTCCATCAGCCCCAGCATCTTCCCCGTG-TCCAAGTCAGG-CTGGACCCCAACTCCTCCTGACCCAGCCTGTGCTCCTTCCTCTACTCATCACCCATCTTGCAGGACAGGGTCGGGGCCTGGGAGTCATGCATAGCTGTGCTGG--------GTGTTGCTTTTAGTAGAAAATCTGAACCACTTTGTGTGATACATGAGAGA-GGGGAGATTCTAAACCAGTGGGGTTTTTACAAATCTTTGCTTTCTCC-TAATATTGTGGCTTCATCTCACGAATCTCAGACCCCAGCACTGATGGA------TACAATTACACGTACCTGCGGCTGCCTCTCCTGGC-TTTGTAACCCTTGCAACACATAGTTATTGGTAGGAGCCGACCAGGCCCAGGGAGGGTTGGAGA----CTGGGGCAGGTCTAGGATGAGCCACAACCCAGATGCCGCAGGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47331016 897 + 51301725 ---attaaaatgataagtttatatatt-------catgtattgCTTTAAATGTTTCAGAAGGACAGAGAG------GAACAATAGACAAGTGTGCACGGAAAAGGCAGGGTAGAAATGAATGACACACAAGCCGTGCTGTGACTAATTCCCTAACTCA-TCCAGGGAG-----CAGGTGCACGGCCCCT----------CCTTACTCTCAGGAGTTCCCTGA---GCACAGAGGCCTCCAGGTGAGCACAGGAGGGACCGTGTGAGCGGCACCCACA-GCTGGGGTGCTTCTCTCTAAAGGAGCAGGTCTTTGGTGGACTCCAGCCTCATCAGAGTCAGATCCCACCGAGGCCTGAGCAGCCTCCTTTCCTGTCCTCAGAGGACCCAGGGACC-CTGCAGGTGTGGGTGAGGGGT-TTATCCTCAGGAGCTCTTGGAAATGAGAAATAAGAGCTGCCAAGGGAGCGG---CCGTCTTTCCTCTCTCCAACT-TgcctgcctctcttcctcctccatcagCCCCAGCATCTTCCCTGTG-TCCAAGTCAGG-CTGGACCCCAACTCCTCCTGACCCAGCCTGTGCTCCTTCCTCTACTCATCACCCATCCTGCAGGACAGGGTCGGGGCCTGGGAGTCATGCATAGCTGTGCTGG--------GTGTTGCTTTTAGTAGAAAATCTGAACCACTTTGTGTGATACATGAGAGA-GGGGAGATTCTAAACCAGTGGGGTTTTTACAAATCTTTGCTTTCTCC-TAATATTGTGGCTTCATCTCACGAATCTCAGACCCCAGCACTGATGGA------TACAATTACACGTACCTGCAGCTGCCTCTCCTGGC-TTGGTAACCCTTGCAACACATAGTTATTGGTAGGAGCCGACCAGGCCCAAGGAGGGTTGGAGA----CTGGGGCAGGTCTAGGATGAGCCACAACCCAGATGCCCCAGGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47028151 878 + 50890351 ---ATTAAAATGATAAGTTTATATATT-------CATGTATTGCTTTAAATGTTTCAGAAGAACAGAGAG------GAACAATAGACAAGTGTGCACGGAAAAGGCAGGGTAGAAATGAATGACACGCAAGCCGTGCTGTGACTAATTCCCTAACTCA-TCCAGGGAG-----CAGGTGCACGGCTCCT----------CCTTACTCTCAGGAGTTCCCTGA---GCACAGAGGCCTCCAGGTGAGCACAGTAGGGACCGTATGAGCGGCACCCACA-GCTG----------CTCTAAAGGAGCAGGTCTTTGGTGGACTCCAGCCTCATCAGAGTCAGATCCCACCGAGGCCTGAGCAGCCTCCTTTCCTGTCCT---------CAGGGACC-CTGCAGGTGTGGGTGAGGGGT-TCATCCTCAGGAGCTCTTGGAAATGAGAAATAAGAGCTGCCAAGGGAGCGG---CCTTCTTTCCTCTCTCCAACT-TGCCTGCCTCTCTTCCTCCTCCATCAGCCCCAGCATCTTTACCGTG-TCCAAGTCAGG-CTGGACCCCAGCTCCTCCTGACCCAGCCTGTGCTCCTTCCTCTACTCATCACACATCCTGCAGGACAGGGTCGGGGCCTGGGATTCGTGCATAGCTGTGCTGG--------GTGTTGCTTTTAGTAGAAAATCTGAACCACTTTGTGTGAGACATGAGAGA-GGGGAGATTCTAAACCAGTGGGGTTTTTACAAATTTTTGCTTTCTTC-TAATATTGTGGCTTCATCTCACCAATCTCAGACCCCAGCACTGATGGA------TACAATTACACGTACCTGCGGCTGCGTCTCCTGGC-TTTGTAACCCTTGCAACACATAGTTATTTGTAGGAGCCGACCAGGCCCAGGGAGGGTTGGAGA----CTGGGGCACGTCTAGGATGAGCCACAACCCAGATGCCCCAGGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45523895 851 + 49145316 ---ATAAAAATTGTAAATTTATATATT-------CAAGTATTGCTTTAATAGTTTTGGAAAAGAGGAGAG------TAACGACGGACAAGTACACACAGAAAACACAGAGTAGAAGTGAGTGACACACAAGACGGGCTGTGGCTGATTCCCTAACTCACTCCAGGGAG-----CAGGTACATGGCCTCT----------CCTTAGTCTCAGGGGTGTCCTGA---GCACAGAGGCCACCAGGTGAGTACAGGAGGGGCCATGTGAGTGGTACCCACA-GCTGGGGTGCTTCTCTCTAAAGCAGCAGGTCT-AGGTGAACTCCAGCCTCATCCCAGTCAGATCCCACTGAAGCCTGAGCAGCTTCCCCTCCTGTCCTGAGAGGGCTGTGGGATA-CTGCATGTGTGGGTGAGGGGCTCCATCCTCAGGGGCTCTTGGAAATGAGAAATCAGAGCTGCAAAGGGAGTGA---CTATCTGTCCTCTCTCCAGCT-TGCCTGCCTCTCTTCCTCCTTCATCAGTCCCAGCATCTTCCCTGTG-TCCAAGTCAGG-CTGAACCCCAAATCCTGCTGACCCAAGCTATTCTCCTTTCTCTTCCCATCACACATCCCACAGGACCAGGTC----------------------------------------------------TAGAAGATTGGAGAGCTTTTGTTTCTGACG-GAGAGAGGGGGAGATTCTAAAACAGTGGGGCTTTGTAAACTTGTTACTTTC--A-AAATACTGTGGCTTTGTCTTACTAAGCTGAGATCCCAGGAGTGATGAG------TGAAACCGCGGGCACCTGC-TCCATCTCCGTTGGC-TTTTCAACCCTTACAAGCCTCAGTTATTGGGGGAATCAGGACAAGGCCAGAGAGGGTTGCATA----TGAGAGCAAGTCTAGGTTAAGCCACATCTCAGATGCCCCAAAAA i calJac3.chr22 T 37905 C 0 s canFam3.chr1 19730806 880 - 122678785 ATCCTCATAATG-TAAATTTGTATTTTGCATCTGCAAGGCTCACCTCGAACG-TTCTGAGAAGCAGTCAGGGTGGTTGACACTGGACAAGTTTCCACACACAATGCAGCGCAGACACGAATTGCACAC-AGACACACTG------------CACAGCA-TCCAAGGGGACTCCTGTGTGCTCTGTCTGTGTGAACCTACCTTTGATGTCAGGTGGGCACTGAGGGGCATGGAGGCCCCGAGGGGAGCACAG--GGGGCTGTG-GAGCGGTGCTCATAGGCAGGGAGGCATCTCTCT--AGGAATGTGTCTGGTAAGGGCTCCACCTGCGCTCTCAGCAAACCCCACCTTGGTCTCAGCAG-CTCCAGGCCTGATGTGAGAGGGCTCAGAGACCTCCTCAGGTGTGAGTGAGGGGCTCCATACTCAGGGTCTTTGGAAATTGGG---------------AGGGAATGTGGACCATCATTA-------CAACTGTCCCAGACTC---TCCTCCTCCATCATCCC--ATATCCTGCCTGTGCTCTGAGTCAGGCCTGGACACCAAGTGCTGCAAAACTGCCC--CTCTTCATCCTCAATC--GCACACGTTCTCCAAAACCTCG------CCTAGGAGTTG-----AGGTGTGCTGACAAGGGGCAGGTGGCTTTTAG----AAAATTGCACGGTTTTGTACGGGATGAGGAGGA-GCTGAGATGATCAATCAGT-GGGCATTTCCTAATCTGTGCTGTCTCCATGCTACTGAGAATACTTCTTGTTCTGCTAAGACCCCCGC-CTGAGGGA------CCAAATCATATGCATCTGC----GTTTCCCTGGGC-TTCtttttttttttaatttttatttatttatgatagtcacagagagagagagagagagagagagaggcagagacacaggcagagggagaagcaggctccatgcaccgggag i canFam3.chr1 C 0 I 720 a score=293726.000000 s hg38.chr19_GL949747v2_alt 298094 100 + 729520 GTCAGAAATGAAAGGGCTTTGGGG--GTCACTTCCAGGCAGCTCCTTCTTATTCGGATGGGAAAGGCCAGGGCGGAAGGGGAAAAGGCTTTCTCAGAAGTTC s panTro4.chr19 59254664 100 + 63644993 GTCAGAAATGAAAGGGCTTTGGGG--GTCACTTCCAGGCAGCTCCTTCTTATTGGGATGGGAAAGGCCAGGGCGGAAGGGGAAAAGCCTTTCTCAGAAGTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56107709 100 + 60714840 gtcagaaatgaaagggctttgggg--gtcacttccaggcagctccttcttattcagatgggaaagcccagggtggaaggggaaaaggctttctcaGAAGTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102870224 100 - 106955855 GTCAGAAATGAAAGGGCTTTGGGG--GTCACTTCCAGGCAGCTCCTTCTTATTCGGATAGGAAAGCCCAGGGTGGAAGGGGAAAAGGCTTTCTCAGAAGTTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60136979 100 + 64156825 gtcagaaatgaaagggctttgggg--gtcacttccaggcagctccttcttattcggatgggaaaacccagggtgggaggggaaaaagctttctcaGAAGTTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55223899 100 + 59248254 GTCGGAAATGAAAGGGCTTTGGGG--GTCACTTCCAGGCAGCTCCTTCTTATTCGGATGGGAAAACCCAGGGTGGGAGGGGAAAAAGCTTTCTCAGAAGTTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47331913 100 + 51301725 GTCAGAAATGAAAGGGCTTTGGGG--GCCACTTCCAGGCAGCTCCTTCTTATTCGGATGGGAAAACCCAGGGTGGGAAGGGAAAAGGCTTTCTCAGAAGTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47029029 100 + 50890351 GTCAGAAATGAAAGGGCTTTGGGG--GCCACTTCCAGGCAGCTCCTTCTTATTCGGACGGGAAAACCCAGGGTGGGAAGGGAAAAGGCTTTCTCAGAAGTTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45524746 96 + 49145316 GTCAGAAATGAGGAGGCTTTGGGGGAGTCACCTCCAGGCAGCTCCCCCTTATTCAGATGGG-GAGTCCAGGGTGTGAGGGGAA-----CTTCTTAGAAGTTC i calJac3.chr22 C 0 I 38011 e canFam3.chr1 19731686 720 - 122678785 I a score=645059.000000 s hg38.chr19_GL949747v2_alt 298194 286 + 729520 tgaggtaggatgtgggactttggaggcggggactcagacaccacaccagattgagaactagctaaaacagggcaga-------gggtggaagcagctcttcttaagacacgcccaccagtgtggcatcccggtttaccgttgccatggcaacccccggaaggtaccgcccttttccacggcaaagacccactgaccggaagttaccgccctttttctaggaatttctgcatacctgacctttaatttgcatataattaaaagcaggtacaagagtggctgcaggtgtgtttct s panTro4.chr19 59254764 286 + 63644993 tgaggtaggatgtgggactttggaggcggggactcaggcaccacaccagattgagaactagctaaaacagggcgga-------gggtggaagcagctcttcttaagacacgcccaccaatgtggcatctcggtttaccattgccatggcaacccccggaagttaccgcccttttccacggcaaagacccactgaccggaagttaccgccctttttctaggaatttctgcatacctgacctttaatttgcatataattaaaagcaggtacaagtgtggctgcaggtgtgtttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56107809 286 + 60714840 tgaggtaggatgtgggactttggaggcggggactcagacaccacaccagattgaaaactagctaaaacagggcggg-------gggtggaagcagctcttcttaagacacccccaccagtgtggcatcccagtttacctttgccatggtaacccctggaaggtaccgcccttttccacagcaatgacccactgactcgaagttaccgccctttttctaggaatttctgcatacctgacctttaatttgcatataattagaagcaggtacaagtgtggctgcagctgtgtttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102870324 286 - 106955855 Ggaggcaggatgtgggactttggaggtgggaatgcagacaccacaccagattgagaactagctaaaacagggcggg-------gggtggaagcagctcttcttaagacacgcccaccagcgtggcatctcagtttaccattgccatggcaacccccggaagttaccgcccttttccatggcaaggacccactgactggaagttaccgccctttctctaagaatttctgcatacctgacctttaatttgcatataattaaaagcaggtacaagtgtggctgcagctgtgtttct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60137079 290 + 64156825 tgaggtaggatgtgggactttggaggcggggactcagacgccaccccagattgacacctagttaatatagggcggg--aggaggggtagaagccgctgttcttaagacacgcccaccagcgtggcatctcagtttaccattgccatggcaacgcccggaagttaccgccctttcccaaggcgaagacccactgaccggaagttaccaccctttc-ctaggaatttctgcatacgtgccctttaattagcctataattaaaagcaggtacaagagtgactgcagctgtgtttct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55223999 290 + 59248254 tgaggtaggatgtgggactttggaggcggggactcagacgccaccccagattgacacctagttaatatagggcggg--aggaggggtagaagccgctgttcttaagacacgcccaccagcgtggcatctcagtttaccattgccatggcaacgcccggaagttaccgcccttttccaaggcgaagacccactgaccggaagttaccaccctttc-ctaggaatttctgcatacgtgccctttaatttgcctataattaaaagcaggtacaagagtgactgcagctgtgtttct i macFas5.chr19 C 0 T 16998 s papAnu2.chr19 47332013 290 + 51301725 TGAGGTAGGATGTGGGACTTTGGAGGCGGGGACTCAGACGCCACCCCAGATTGACACCTAGTTAATATAGGGCGGG--AGGAGGGGTATAAGCCGCTGTTCTTAAGACACGCCCACCAGCGTGGCAtctcagtttaccattgccatggcaacgcCCGGAAGTTACTGCCCTTTTCCAAGGCGAAGACCCACTGACCGGAAGTTACCACCCTTTC-CTAGGAATTTCTGCATAGGTGCCCTTTAATTTGCCTATAATTAAAAGCAGGTACAAGAATGACTGCAGCTGTGTTTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47029129 292 + 50890351 tgaggtaggatgtgggactttggaggcggggactcagacaccaccgcagactgagaactagctaatacagggcggggtggggagggtggaagctgctgttcttaagacacgcccaccagcgtggcatctcagtttaccattgccatggcaacgcccggaagtcaccgcccttttccaaggcgaagacccactgaccggaagttaccaccctttt-ctaggaatttctgcatacgtgtcctttaatttgcctataattaaaagcaggtacaagagtgactgcagctgtgtttct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I a score=236437.000000 s hg38.chr19_GL949747v2_alt 298480 142 + 729520 gagctgctattctgggcacaccgcctgtggggcagccctgccaccctaggagcagtacct---------ctgctgctgctgtgctcggccacttgactagaggttgccgtaacccttaaggggttgtgtaacaccagctcacccttaaatt s panTro4.chr19 59255050 142 + 63644993 gagctgctattctgggcacactgcctgtggggcagccctgctaccctaggagcagtacct---------ctgctgctgctgtgctcggccacttgactagaggttggcgtaacccttaaggggttgtgtaacaggagctcacccttaaatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56108095 140 + 60714840 gagctgctattctgggtacactgcctgtggggcagccctgctaccctaggagcagtacct---------ctgctgctgctgtgcacggccatttgactagaggttggcataacccttaaggggttatgtaacaccagctcaccctt--act i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102870610 142 - 106955855 gagctgctatcctgggcacactgcctgtggggcagccctgctaccctaggagcagtacct---------ctgctgctgctttgcaaggccacttgactagaggttggcgtaacccttaaggggttatgtaacaccagctcacccttaaatt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60137369 151 + 64156825 aggctgctgttctgggcaccctgcctgcggggcagccctgctACCTGACCCGGAGTACCTctgctgctgctgctgctgctgTGCATGGCCGCTTGACGAGAGGTTGGCGTAACCCTTAAGGGGTTAGGTAACACTAGCTCACCCTTAAATT i rheMac3.chr19 C 0 I 5568 s papAnu2.chr19 47332303 142 + 51301725 GAGCTGCTgttctgggcacactgcctgcGGGGCAGCCCTGCTACCTGAGGCGGagtacct---------ctgctgctgctgtgcatGGCCGCTTGACGAGAGGTTGGCATAACCCTTAAGGGGTTAGGTAACACTAGCTCAcccttaaatt i papAnu2.chr19 C 0 I 18 s chlSab2.chr6 47029421 142 + 50890351 gagctgctgttctgggcacactgcctgcggggcagccctgctacctgaggcggagtacct---------ctgctgctgctgtgcatggccgcttgacgagaggttggcgtaacccttaaggggttaggtaacactagctcacccttaaatt i chlSab2.chr6 C 0 I 21 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e macFas5.chr19 55224289 16998 + 59248254 T a score=1308456.000000 s hg38.chr19_GL949747v2_alt 298622 1099 + 729520 ccttttttttttgttttt-gagatagagttttactctgtcacccaggttgaagtgcaatggcgccatctcggctcgctgcaatctctgcctccggagttcaagcgattctcctgcctcggttccgaagtagctggaattacaggcaccagccaccacaccctgctaatttttgtag-tctttagtagagacggggtttcaccgtgttggccaggttggtctcagac-tcctgacctcaaatgatctgcccgcctcagccttccaaggtgctgggatgacaggtgtggaccaccgcgaccggcctaaattctttcttaggcaaagccaagaactcttctgggctatgccccgatttgggagctccccttccccgcatcatctagttaccaggaagggatgacggagacagcgagtgagaggcagagagactttccgcagaggcagggacaattaggagagaggcgagatggctagacagcagagatggtga----cagtgatcagcggaggggtggcaatgggtgaaagacacggagaggtggcactgggctagacagcgagaggttgctgagacagtcggagagacagcg-gggcggggcagtctgtgatcagggctccaagagcggtcacac--aggctgtaacagtaaacagctgctaatactgcagagctgtcacactaaccaaaggctttgcttttggcgccttcatctttccttggatagtggtggagctcagcgatgggcaagcaggtgagacccccgctccaaccgacaggcccatgggttaccagtccccgcaccggacccctgggtgacagctgagcccacccaagctgggggatcctgcagaga-ccttcacctgggccccatgtggaagatttttgatgttatttaggcttttggggatgggggagtgtcccctctgcctcccccgtaatatctggtgagcCGTAtgggtaatgcgagcactagacacctaaaccccaccagaacgcaatgcatccatgtaaggaacctgcgcgtgtagcgcctgaatctaaaaaa--aTAGAGTAACATTAAA------------AACAACAACAACA-----ATAAAgccgtgtgaggtggctcacgcctgtaatc s panTro4.chr19 59255192 1103 + 63644993 tttttttttttttttttt-gagacggagtttta--ctgtcacccaggctgaagtgcaatggcgccatttcggctcgctgcaatctctgcctccggagttcaagcgattctcctgcctcagctcttaagtagctggcattacaggcacccgccaccacaccctgctaatttttgtag-tctttagtagagacggtgtttcaccatgttggccaggttggtctcagac-tcctgacctcaaatgatctgcccgcctcagccttccaaggtgctgggatgacaggtgtgaaccaccgcgaccggcctaaattctttcttaggcaaagccgggaactcttctgggctatgccccgatttgggagttcaccttccccgcattatctagttatcaggaagagatgacggggatagcgagtgagaggcagagagactttcagcagaggcagggacaattaggagagaggcgagatggctagacagcagagatggtgacagtcagtgatcagcggaggggtggcaatgggtgaaagacacggagaggtggcactgggctagacagccagaggttgctgagacagtcggagagacagcg-gggcggggcagtctgtgatcagggctccaggagcggtcacactgaggctgtaacaataaacagctgctaatactgcagagctgtcacactaaccaaaggctttgcttttggcgccttcatctttccttggatagtggtggagctcagcgatgggcaagcaggtgagacccccgctccaaccgacaggcccatgggttaccagtccccgcaccggacccctgggtgacagctgagcccacccaagctgggggatcctgcagaga-ccttcacctgggccccatgtggaagattttcgatgttatttaggcttttggggatgggggagtgtcccctctgcctcccccgtaatatctggtgagcCGTAtgggtaatgcgagcactagacacctaaaccccaccagaacgcaatgcatccatgtaaggaacctgcgcgtgtagcgcctgaatctaaaaaa--aTAGAGTAACATTAAA------------AACAACAACAACA-----ATAAAgccgggtgagttggctcacgcctgtaatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56108235 1116 + 60714840 tttttttttttttttttt-gagacggagtttcactctgtcacccaggctgaagtgcaatggcgccatctcggcttgctgcaatctccgcctccggggttcaagcgattctcctgcctcagctcctaaggagctgggattacaggcacccaccaccacgccctgctaatttttgtag-tctttagtagagacggggtttcaccgtgttggccaggttggtctcggac-tcctgacctcaagtgatctgcccgcctcagcctcccaaagtgctgggatgacaggtgtgaaccactgcgaccggcctaaattctttcttaggcaaagccaagaactcttctgggctatgccccgatttgggagctcaccatccccgcatcatctagttaccaggaaggggtgatgaggacagcgagtgagaggcagcgagactttccgcagaggcagggacaattagcagagaggcgagatagctagacagcagagatggtgacagtcagtgatcagtggaggggtggcaaagagtgaaagacatggagaggtggCACTGGGCTAGACAGCAAGAGGTTGCTGAGATAGTTGGAGAGACAGCA-GGGCGGGGCAGTCTGTGATCAGGGCTCAAagagtggtcacactgaggctgtaataataaacagctgctaatactgcagagctgtcatactaacaaaaggctttgcttttggcaccttcatctttccttggatagtggtggagctcagcgatgggcaaggaggtgagacccccgctccaaccgacaggcccatgggttaccagtccctgcactggacccctgggtgacagctgagcccacccaagctgggggatcctgcagaga-ccttcacctgggccccaggt-gaagattttcaatgttatttaggcttttggggatgggggagtgtcccctctgcctcccccataatatccgatgaGTTGTAtgggtaatgcgagcactagacacctaaacctcaccagaacgcaatgcatccatgtaaggaacctgcgcatgtagcacctgaatctaaaaaa--aTAGAGTAACATTAAAaacagcaacaacaacaacaacaaca-----aAAAagccgagtgaggtggctcacgcctgtaatc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102870752 1113 - 106955855 cctttttttttttttttt-gagacggagttttgctctgtcacccaggctggagtgcaatggcgccatctcagctcgctgcaatctccgcctccggggttcaagtgattctcctgcctcagctcctaagtagctgggattacaggcacccgccaccacgccctgctaatttttgtag-tctttagtagaaacgaggtttcactttgttggccaggttggtctcgaac-tcctgacctcaagtgatctgcctgcctcagccttccaaagtgct-ggatgacaggtgtgaaccaccgcgaccggcctaaattctttcttaggcaaagccaagagctcttctgggctatgccccgatttgggagctcaccttccctgcatcatctagttaccaggaagggatgatgaggacagcgagtgagaggcagagagactttcagcagaggcagggacaattagcagagaggcgagatggctagacagcagaggtggtgacagtcagtgatcagcggaggggtggcaatgggtgaaagacacggagaggtggcactgggctagacagcgagaggttgctgagacagttggagagacagca-gggcggggcagtctgtgatcagggctccaagagcggtcacactgaggctgtaacaataaacagctgctaatactgcagagctgtcctactaaccaaaggctttgcttttggcgccttcatctttccttggatagtggtggagctcagtgatgggcaagcaggtgagacccccgctccaaccgacaggcccatgggttaccagtccccgcactggacccctgggtgacagctgagcccacccaagctaggggatcctgcagagacccttcacctgggccccatgtggaagattttcgatgttatttaggcttttggggatgggggagtgtcccctctgcctcccccataatatctggtgaGctatatgggtaacgcaagcactagacacctaaacctcaccagaatgcgatgcatccatgtaaggaacttgtacgtgtagcacctgaatctaaaaaaaCATACAGTaacattaaa------agcaacaacaacgacaaca-----aaaaAgccgggtgaggtggctcacgcctgtaatc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47332463 1081 + 51301725 ttatttatttattttttt-gagacgtagtttcgctgtgttgcccaggctgaagtgcaatggcgccatctcggctcactgcaacctccgcctcaag------------------------gCTCctaagtgactgggattacaggcgcccgccaccacgccctgctaatttttgtagttttttagtagagagggggttttaccgtgttggccaggctggtctcggac-tcctgacctcaggtgatccacccacctcagcctcccacagtgctgggatgacaggtgtgagccaccgcgcccggcctaaattctTTCTTAGGCAAAGCCAAGAACTGTCCTGGGCTATGCCCCAATCTGGGAGCTCACCTTCCCCGCATCATCGAGTGACCAGGAAAGGATGATGAGGACAGCGAATGAGAGGTAGAGAGACTTTCAGCCGAGGCAGGGACAATTAGCGGAGAGGCGAGATGGCTGGACAGCAGAGATGGTGACAGTCAGCGATCCAAGGAGGGGTGGCAATGGGTGAGAGACACGGAGAGGTGGCACTGGGCAAGACAGCGAGAGGTTGCTGAGACAGGTGGAGAGACAGCGAGGACAGGGCAGTCTGTGATCAGGGCTCCAAGAGCGGTCACACTGAGGCCATAACGATAAACAGCTGCTAATGCTGCAGAGCTATCATACTAACCAAAGCCTTTGCTCTTGGCGCCTTCATCTTTCCCTGGCTGGTGGTGGAGCTCAGCGACGGGCAAGCAGGTGAGACCCCCGCTCCAACCGGCAGGCCCATGGGTTACCAGTCCCCGCACTGGACCCCTGGGTGACAGCTGAGCCCACTCAAGCGGGGGGATCCTGCAGAGA-CCTTCACCTGGGCCCCATGTGGAA--------ATGTTATTTAGGCTCTTGGCGATGGGGAAGTGTCCGCTTTGCCT-CCCCATAATATCTGGTGAGCTATATGGGTAATGCGTGCCCTAGACACCTAAACCTCACCAGAACACAATGCATCCATGAAAGGAACCTGCGTGTGTAGCACCTGAATCTaaaaaa--aTAGAGtaacattaaa----------acaacaacaacaacagcatccaaaagccgggtgaagtggctcacgcctgtaatc i papAnu2.chr19 I 18 C 0 s chlSab2.chr6 47029584 1095 + 50890351 ttatttatttatttttttggagacggagtttcgctgcgttgcccaggctgaagtgccatggcgccatctcggctcactgcaacctccgcctcaagggttcaagcgattcttctgcttcagctcctaggtgactgggattacaggcgcccgccaccacgccctgctaatttttgtag-tttttagtagagagggtgttttactgtggtggccaggctggtcttgaactttctgacctcaagtgatccacccacctcagtctcccacagtgctgggatgacaggtgtgagccaccgc-----gcctaaattctttcttaggcaaagccaagaactgacctgggctatgccccaatctgggagctcaccttccccgcatcGTCTAGTGACCAGGAAAGGATGATGAGGACCGCGAGTGAGAGGC--AGAGACTTTCAGCCGAGGCAGGGACAATTAGCAGAGAGGCCAGATGGCTGGACAGCAGAGATGGTGACAGTCAGCGATCCGCAGAggggtagcaatgggtgagagacacggagaggtggcactgggcaagacagcgagaggttgctgacacaggtggagagacatcgaggacagggcagtctgtgatcagggctccaagagccatcacacagaggccgtaacgataaacagctgctaatactgcagagc--tcatactaaccagaggctttgctcttggtgccttcatctttccctggctggtggtggagctcagcgacgggcaagcaggtgagacccccactccaaccagcaggtccatgggttaccagtcccggcactggacctctgggtgacagctgagcccacccaagcggggggatcctgcagaga-ccttcacctgggccccatatggaa--------atgttatttaggctcttggggatggggaggtgtccgctttgcctcccccataatatctggtgaGctatatgggtaatgcgtgccccagacacctaaacctcaccagaacacaatgcatccatgtaaggaacctgcgtgtgtagcacctgaatctaaaaaa--aTAGAGTAACATTAA-------------AACAACAACAACAGCATCAAAAAgccgggtgaggtggctcatgcctgtaatc i chlSab2.chr6 I 21 I 23417 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=4628.000000 s hg38.chr19_GL949747v2_alt 299721 6 + 729520 tcagaa s panTro4.chr19 59256295 6 + 63644993 tcagaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56109351 6 + 60714840 tcagaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102871865 6 - 106955855 tcagaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47333544 6 + 51301725 ctagaa i papAnu2.chr19 C 0 T 19545 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e chlSab2.chr6 47030679 23417 + 50890351 I e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=668515.000000 s hg38.chr19_GL949747v2_alt 299727 1281 + 729520 ctttgggaggccgaagcgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaacaccgtctctactgaaaatacaaaaacttagctgggcatggtggtgggtgcctgtaatcccagctactcATGAATTATCATGAAGAGAAAATGggccaggtgcggtgactcacgcctgtaatcctagcactttgtgaggccaaggcggacagatcacctgcggtcaggagttcgagacaagcctggccaacatggtgaaaccccatctctattaaaaat-taaaaattagccgggcatgatggtgggcacctgtaatcccagctactggggagtctgaggcaggagaatcacttgaacccaggaggtgaaggttgcagtgagccgagatggtgccactgcattccagcctaggcgacagagagaagcttcgtctc---aaaaaaaaaaaaaagagaaaaaaTGGTCCACAATAAAATAACAGGCGGTTATTGTACCTGAATTTATCAGTAAAAAATTGAATTTTTTCTTTTATTGCCTAGAGTCCACCTTCTATCAATGTCACAAGCATGACACTCAGAACAGAGAGGAAAAGATTATATTTGAAGTCCTAATATAAATTTAATTTACCATATTGAAGTATAAGTATTTTAGAGTTGCTTCATGAA-TTTTTTGCTAAAATCTAAAAAGAAAACCCAC-AAAAAACCCTAAATGTAATGACGTTAATGCAGTTCCTGACAGTGACTTTTAGCCCTTCTGCAAACTTTTGTTTCGTTGCCTTCCTGACCGTATGACGCAATGAAATTTCGATTTGCTTTAATTTCTGCTTCCTCTTTCCCTATGTTTCAGTTCTGAAGGTATGAGCTTCTCTCATCt--------------------------------------ttttcttttcttttactttgagatggagtctcgctctgtcacccaggctggagtgcaacagcctgacctcagctcactgcaacctctgctacccatgttcaagtgattctcctgtctcagtctcccaagtagct-ggatgacaggcatgagccaccacgcccagttaatttttgtatttttagtagagacaggatttcaccctgttggtcaggctggtctcgaattcctcacctcaggtgatccacctgctttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccggccAGGATATTTTTTTCTTTAGAGCACTTACTTCACTTTCTTTGAGTGAAGTTGGATGGGTTACAGCCGTTGTGGTGTTACAAAGAATAATTCTGAGAGAAAT s panTro4.chr19 59256301 1297 + 63644993 ctttgggaggccgaagcgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctactgaaaatacaaaaacttagctgggcatggtggtgggtgcctgtaatcccagctactcATGAATTATCATGAAGAGAAAATGggccaggtgcggtgactcacgcctgtaatcctagcactttgggaggccaaggcgtacagatcacctgcggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatataaaaattagccgggcatggtggtgggcacctgtaatcccagctactggggagtctgaggcaggagaatcacttgaaccctggaggtgaaggttgcagtgagccgagatggtgccactgcattccagcctaggcgacagagagaagcttcgtctcaaaaaaaaaaaaaaaaagagaaaaaaTGGTCCACAATAAAATAACAAGTGGTTATTTTACCTGAATTTATCAGTAAAAAATTGAATTTTTTCTTTTACTGCCTAGAGTCCACCTTCTATCAATGTCACAAGCATGACACTCAGAACAGAGAGGAAAAGATTATATTTGAAGTCCTAATATAAATTTAATTTACCATATTGAAGTATAAGTATTTTAGAGTTGCTTCATGAATTTTTTTGCTAAAATCTAAAAAGAAAACCCAC-AAAAAACCCTAAATGTAATGACGCTAATGCAGTTCCTGACAGTCACTTTTAGCCCTTCTGCAAACTTTTGTTTCGTTGCCTTCCTGATCGTATGACGCAATGAAATTTGAATTTGCTTTAATTTCTGCTTCCTCTTTCCCTATGTTTCAGTTCTGAAGGTATGAGCTTCTCTCATCt----------------------------ttttattttattttcttttattttactttgagatggagtctcgctctgtcacccaggctggagtgcaacagcctgacctcagctcactgcaacctctgcctcccatgttcaagtgattctcctgtctcagtctcccgagtagctgggatgacaggcatgagccaccacacccagttaatttttgtatttttagtagagacaggatttcaccctgttggtcaggctggtctcgaattcctcacctcaggtgatccacctgctttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcctggccAGGATATTTTTTTCTTTAGAGCACTTACTTCACTTTCTTTGAGTGAAGTTGGATGGGTTACAGCCGTTGTGGTGTTACAAAGAATAATTCTGAGAGAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56109357 1294 + 60714840 ctttgggaggccgaagcggatggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaataccatctctactgaaaatacaaaaacttagctgggcatggtggtgggtgcctgtaatcccagctactcATGAATTATCATGAAGAGAAAATGggccaggtgtggtgactcgcacctgtaatcctagcactttgggaggccaaggcgggcagatcacctgcggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatataaaaatcagccgggcatggtggtgagcacctgtaatcccagctactggggagtctgaggcaggagaatcacttgaacccaggaggtgaaggttgcagtgagccaagatggtgccactgcattccagcctaggcgacagagagaaacttcgtctc---aaaaaaaaaaagaagagaaaaaaTGGTCCACAATAAAATAACAAGTGGTTATTGTACCTGAATTTATCAGTAAAAAATTGAATTTTTTCTTTTATTGCCTAGAGTCCACCTTCTATCAATGTCACAAGCATGACACTCAGAACAGAGAGGAAAAGATTATATTTGAAGTCCTAATATAAATTTAATTTACCATATTGATGTATAAGTATTTTAGAGTTGCTTCATGAA-TTTTTTGCTAAAATCTAAAAAGAAAACCCACAAAAAAACCCTAAATGTAATGACGTTAATGCAGTTCCTGACATTGACTTTTAGCCCTTCTGCAAACTTTTGTTTCGTTGCTTTCCTGACCATATGACGCAATGAAATTTGAATTTGCTTCAATTTCTGCTTCCTCTTTCCCTATGTTTCAGTTCTGAAGGTATGAGCTTCTCTCATCt----------------------------ttttattttattttcttttcttttactttgagacggagtcttgctctgtcacccaggctggagtgcaacgacctgacctcagctcactgcaacctctgcctcccatgttcaagtgagtctactgtctcagcctcccgagtagctgggatgacaggcatgagccaccacgcccagttaatttttgtatttttagtagagacaggatttcaccatgttgatcaggctggtctcgaattcctcacctcaggtgatccacctgctttggcctcccaaagtgctgggattacaggtgtgagccactgtgcctggccAGGATATTTTTTTCTTTAGAGCACTTACTTCACTTTCTTTGAGTGAAGTTAGATGGGTTACAGCCATTGTGGTGTTACAAAGAATAATTCTGAGAGAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102871871 1308 - 106955855 ctttgggaggccgaagcggatggatcacctgaggtcaggagtttgagatcagcctggccaacatggtgaaacaccatctctactgaaaatacaaaaacttagctgggcttggtggtgggtgcctgtaatcccagctactcATGAATTATCATGAAGAGAAAATGggccaggtgcggtgactcacacctgtaatcctagcactttgggaggccaaggcgggcagatcacctgctgtcaggagttcgagagaagcctggccaacatggtgaaaccccatctctactaaaaatataaaaattagccggacatggtggtgggcacctgtaatcccagctactggggagtctgaggcagaagaatcacttcaacccaggaggtgaaggttgcagtgagccaagatggtgccacttcattccagcctaggcgacagagagaaacttcgtctc----------aaaaaaagagaaaaaaTGGTCCACAGTAAAATAACAAGTGGTTATTGTACCTGAATTTATCAGTAAAAAATTGAA-TTTTCCTTTTATTGCCTAGAGTCCACCTTCTATCAATGTCACAAGCATGACACTCAGAACAGAGAGGAAAAGATTATATCTGAAGTCCTAATATA-----AATTTACCATATTGATATATAAATATTTTAGAGTTGCTTCATGAA-TTTTTTGCTAAAATCTAAAAAGAAAACCCACAAAAAAACCCTAAATGTAATGACATTAATACGGTTCCTGACATTGACTTTTAGCCCTTCTG-AAACTTTTGTTTCATTGCCTTCCTGACCATATGACGCAATTAAACTTGAATTTGCTTTAATTTCTGCTTCCTCTTTCCCTATGTTTCAGTTCTGAAGGTAAGCACTTCTCTCATCTTTttttaatttaatttaatttaatttaattttattttattttattttattttactttgagacagagtctcgctctgtgacccaggctggagtgcaacggcctgacctccgctcactgcaacctctgcctcccatgttcaagtgattctcctgtctcagcctcccgagcagctgggatgacaggcatgagccaccacacccagttaatttttgtatttttagtagagacaggatttcaccatgttggtcaggctggtcttgaattcctcacatcaggtgatccacctgctttggcctcccaaagtgctgagattacaggtgtgagccaccgtgcccggccAGGATATTTTTTTCTTTAGAGCACTTACTTCATTTTCTTTGAGTGACGTTGGAGGGGTTATAGCCATTGTGGTGTTACAAAGAATAATTCTGAGAGAAAT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e chlSab2.chr6 47030679 23417 + 50890351 I e papAnu2.chr19 47333550 19545 + 51301725 T e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=374307.000000 s hg38.chr19_GL949747v2_alt 301008 444 + 729520 ATTGTTATTTGTTGGTAAAATAAAAGTGTCTTAAGTTAAAAGTTTCCTTTGAGACCCAATAAAGAAATTAGTATTACTACATAATGCATTTATTTACAAGTCTTTTTTTGCATGTCCATTGTAAATTTAATATTTTAATTTACAATGAGTTTACAAATAATTTTTACAAATAAATGTTACAAATAAAAATAATTTACAATGAGTAAATGAGTTGGAATTTATTTACATGCTTATGGCTGCCTTTGATTAAACTTCTTCCAAAAATAAACTCTGTCCAGATGTTGGGTTTTATTATACTTAATTTCATTTTAATGTTATTTCATGTGAGATTACTTGAATACAAGCTGTTGCATAATTGCTCCCAAGTGGAGTCTTTGCTGTGCACTTGCATACCCCAGAGTGGGAGGTTTGGGGATTCTGAATGGCCAGGGCAGCGTGTGGGTG s panTro4.chr19 59257598 444 + 63644993 ATTGTTATTTGTTGGTAAAATAAAAGTGTCTTAAGTTAAAAGTTTCCTTTGACACCCAATAAAGAAATTAGTATTACTACATAATGCATTTATTTACAAGTCTTTTCTTGCATGTCCATTGTACatttaatattttaatttacaatgagtttacaaataatttttacaaataaatgttacaaataaaaataatttaCAATGAGTAAATGAGTTGGAATTTATTTACATGCTTATGGCTGCCTTTGATTAAACTTCTTCCAAAAATAAACTCTGTCCAGATGTTGGGTTTTATTATACTTAATTTCATTTTAATGTTATTTCATGTGAGATTACTTGAATACAAGCTGTTGCAAAATTGCTGCCAAGTGGAGTCTTTGCTGTGCATTTGCAAACCCCAGAGTGGGAGGTTTGGGGATTCTGAATGGCCAGGGCAGCGTGTGGGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56110651 439 + 60714840 ATCGTTATTTGTTGGTAAAATAAAAGTGTCTTAAGTTAAAAGTTTCCTTTGACACCCAATAAAGAAATTAGTATTACTACATAATGCATTTATTTACAAGTCTTTTTTTGCATGTCCATTGtaaatttaatattttaatttaCAATGAGTTTACAAATAATTTTTACAAATAAATGTTACAAATAAAGACAATTTACAATGAGTAAATGAGTTGGAATTAATTTACATGCTTATGGCTGCCTTTGATTAAACTTCTTCCAA----AAACTCTGTCCAGATGTT-GGTTTTATTATACTTAATTTGATTTTAATTTTATTTCATGTGAGATTACTTGAATACAAGTTGTTGCATAATTGCTACCAAGTGGAGTCTTTGCTGTGCATTTGGATACCCCAGAGTGGGAGGTTTGGGGATTCTGAATAGCCAGGGCAGCGTGTGGGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102873179 442 - 106955855 ATCGTTATGTGTTGGTAAAATAAAAGTGTCTTAAGTTAAAAGTTTCCTTTGACACCCAATAAAGAAATTAGTATTACCACATAATGCATTTATTCACAAGTCTTTTTTTGCATGTCCACTGTAAATTTAATATTTTAATTTACAATGAGTTTACAAATAATTTTTACAAATAAATGTTACAAATAAAAATAATTTACAATGAGTAAATGAGTTGGAATTTATTTACACGCTTATGGCTGCCTTTGATTAAACTTCTTCCAAAAATAAACTCTGTCCAGATGTT-GGTTTTATTATGCTTCATTTCATTTTAATTTTATTTCATGTGAGATTACTTGAATACAAGTTGTTGCGTAATTGTTATCAAGTGGAGT-TTTGCTGTGCATTTGCATACCCCAGAGTGGGAGGTTTGGGGATTCTGAATGGCCGGGGCAGCGTGTGGGTG i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47054096 441 + 50890351 ATTGTTATTTGTTGGTAAAATAAAAGTGTCTTAAGTTACAAGTTTCCTTTGACACCCAATAAAGAAATTAATATTACTTCATAATGCATTTATTTACAAG--TTTTTTTGCATGTCCACTGTAAATTTAATATTTTAATTTACAATGAGTTTACAAATAATTTTTACAAATAAATGTTACAAATAAAAATAATTTACAATTAGTAAATGAGTTGGAATTTATTTACATGCTTATGACTGCCTTTGCTTAAATTTCTTCCAAAAATAAACTCTGTCCAGATGtt-agttttattatacttaatttaattttaattttatttcatGTGAGATTATCTGAATACAAGTTGTTGCATAATTGCTACCAAATGGAGTCTTTGCTGTGCATTTGCATGCCCTAGAGTGGGAGGTTTGGAAATTCTGAATGGCCAGGGCACCATGTGGGTG i chlSab2.chr6 I 23417 T 19868 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e papAnu2.chr19 47333550 19545 + 51301725 T e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=576843.000000 s hg38.chr19_GL949747v2_alt 301452 1132 + 729520 TACCTTCACAGGCCTGATGTGTGAGCCTTCAAACACCGGGGTGGAGGAAGTGATTAAATAGAGGATGCAATGGTCTGGAGGCAATTTATAGCCCAGAGACCATACCTGGGGCATTTCTCTTCCTTATCTAGCACACAAAGTAGAACCGTGACACTCGGGCGTCACTGACAATGAACACAAAGGGGCTGAATGTCGGGAATCCTGCAGACGCCAGGAAAGAGGTACTTCTCAGCCATTGGCTTGGATTCTGAATCTGGGTTACGCACAATGACAAAATATCAGCTAGAGCATGAGAGGAGACAAACATGCTCACCAGGATGAGGATGGTGTGTGTGGTTGTGGTTTCATGAGATGTTCTGCGGGAGAGGTTGCGGCTGCGAACATGTTGGACTCTCTGCTTGTATCTATGCAGGACGAGGACCATGGAGCTGCTGGTGCAGATCATGAGGGAGACACATATACGGGAGACACATATACCATCTGTGCAGCAGTAAATGACTGCAACTATTACATACAGCGATCTTCCTGGATAGGGTGAGGAGCAGTATCTATACATTTTTTCCATACTCATGTTTTTGCTCTTTATTGGGTCAGTTATTTACTTTGCAGTATAAATATTTACAACAAGATTCAAGATCCAACAGAGGAAACAGCAGAAAACTATAAACTTTGGGGATCTAATTCAGAGTTCCATCTTCCCAGAGATACTGGGGTGAAGCTTCATGGCCTGGAAGCCACTGAAGAGGCAGGTGGTGCTGAGGGAAACCCCTCTGGCCACTCTGTGTAGGTAGAAGACAAGTTTACATCCAGCCTCATCCAGGAAAGGTTTCAATCCAAAAGCCGCCACTGTCTGAGGGATCCCTTTAGAGAAAAGAACCGGGTTGTTGGCTAAGACCAGCTGGCTGAGAATCAGGTCTCTGGGTCTCACTATTTGTGTGGGGACAAAAGTAAAGCTATAAAAGTAAAGGAGTAGAGAATTTCCAAGGATTCCAGCAGCGGTCTGAATGAGAAAGGTAATACTCCAATTTAAGTTAACAGAAACCA---TCTCCATTTAGAGGAGATGTTGGAGTTTGATTCTATTTTCATCAGAGGAATCTGTAGACTGAAAAATACAATTGAGTGTTTTCACTGT s panTro4.chr19 59258042 1132 + 63644993 CACCTTCACAGGCCTGATGTGTGAGCCTTCAAACACCGGAGTGGGGGAAGTGATTGAATAGAGGATGCAATGGTCTGGAGGCAATTTATAGCCCAAAGACCATACCTGGGGCATTTCTCTTCCTTATCTAGCACACAAAGTAGAACCGTGACACTCGGACATCACTGACAATGAACACAAAGGGGCTGAATGTCGGGAATCCTGCAGAAGCCAGGAAAGAGGTACTTCTCAGCCATTGGCTTGGATTCTGAATCTGGGTTACGCACAATGATAAAATATCAGCTAGAGCATGAGAGGAGACAAACATGCTCACCAGGATGAGGATGGTGTGTGTGGTTGTGGTTTCATGAGATGTTCTGCGGGAGAGGTTGCGGCTGTGAACATGTTGGACTCTCTGCTTGTATCTATGCAGGACGAGGACCATGGAGCTGCTGGTGCAGATCGTGAGGGAGACACATATACGGGAGACACATATACCATCTGTGCAGCAGTAAATGACTGCAACTATTACATACAGCGATCTTCCTGGATAGGGTGAGGAGCAGTATCTATACATTTTTTCCATACTCATGTTTTTGCTCTTTATTGGGTCAGTTATATACTTTGCGGTATAAATATTTACAACAAGATTCAAGATCCAACAGAGGAAACAGCAGAAAACTATAAACTTTGGGGATCTAATTCAGAGTTCCATCTTCCCAGAGATACTGGGGTGAAGCTTCATGGCCTGGAAGCCACTGAAGAGGCAGGTGGTGCTGAGGGAAACCCCTCTGGCCACTCTGTGTAGGTAGAAGACAAGTTTACATCCAGCCTCATCCAGAAAAGGTTTCAATCCAAAAGCCGCCATTGTCTGAGGGATCCCTTTAGAGAAAAGAACCGGGTTGTTGGCTAAGACCAGCTGGCTGAGAAACAGGTCTCTGGGTCTAACTATTTGTGTGGGGACAAAAGTAAAGCTATAAAAGTAAAGGAGTAGAGAATTTCCAAGGATTCCAGCAGCAGTCTGAATGAGAAAGGTAATACTCCAATTTAAGTTAACAGAAACCA---TCTCCATTTAGAGGAGATGTTGGAGTTTGATTCTATTTTAATCAGAGGAATCTGTAGACTGAAAAATACAATTGAGTGTTTTCACTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56111090 1115 + 60714840 GACCTTCACAGGCCCAATATGTGAGCCTTCAAACACTGGAGTGGGGTTATTAATTAAATAAAGGATGCAATGGTCTGGAGGCAATTTATAGCCCAGAGACCATACTTGGAGCATTTCTCTTCCTTATCTAGCACACAAAGTAGAACCGTGACACTCGGGCGTCACTGACAATGAACACAGAGGGGCTGAATGTCGGGAATCCTGCAGACGCCAGGAAAGAGGTACTTCTCAGCCATTGGCTTGGGTTCTGAATCTGGGTTACACACAATGATAAAATATCAGCTAGAGCATGAGAGGAGACAAACATGCTCACCAGGACGAGGATAGTGTGTGTGGCTCTGGTTTCATGAGACGTTCTGTGGGAGAGGTTGCAGCTGTGAATGTGTTGGACTCTC----TGTGCCTATGAAGGATGAGGACCATGGAGCTGCTGGTGCAGATCATGA---------------GGCAGACACATATACCATCTGTGCAGCAGTAAATGACTGCAACTATTACATACAGCAATCTTCCTGGATAGGGTGAGGAGCAGTATCTATACATTTTTTCCACACGCATGTTTCTGCTCTTTATTGGGTCAGTTATATACTTTGCGGTATAAATATTTACAACAAGATTCAAGATCCACCAGAGGAAACAGCAGAAAACTATACACTTTGGGGATCTAATTCGGAGTTCCATCTTCCGAGAGATACTGGGGTGAAGCTTCATGGCTTGGAAGCCACTGAGGAGGCAGGTGGTGCTGAGGGAAACCCCTCTGGCCACTCTGTGTAGGTAGAAGACAAGTTTACATCCAGCCTCATCCAGGAAAGGTTTCAATCCAAAAGCCGCCATTGTCTGAGGGATCCCTTTAGAGAAAAGAACCAGGTTGTTGGCTAAGACCAGCTGGCTGAGAATCAGGTCTCTGGGTCTCACTATTTGTGTGGGGACAAAAGTAAAGCTAT-AAAGTAAAGAAGTAGACAATTTCCAAGGATTCCAGCAGCAGTCTGAATGAGAAAGGTAATACCGCAATTTAAGTTAACAGAAAACAGTCCATCCATTTAGAGGAGATGTTGGAGTTTGATTCTATTTTCATCAGAGGAATCTGTAGACTGAAAAATACAATTGAGTGTTTTCACTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102873621 1119 - 106955855 TACCTTCACAGGCCCGATATGTGAGCCTTCAAACACCGGAGTGGGGGAAGTAATTAAATAAAGGATGCGATGGTCTGGAGGCAATTTATAGCCCAGAGACCATACTTGGAGCATTTTTCTTCCTTATCTAGCACACAAAGTAGAACCGTGACACTCAGGCGCCATTGACAATGAACACAAAGGGGCCGAATGTCGGGAATCCTGCAGACGCCAGGAAAGGGGTACTTCTCAGCCATTGGCCTGGGTTCTGAACCTGGGTTACGCACAGTGACAAAATACCAGCCAGAGCATGAGAGGAGACAAACATGCTCGCCAGGACGAGGATGGTGTGTGTGGCTCTGGTTTCATGAGATGTTCTGCGGGAGAGGTTGCAGCTGTGAACGTGTTGGACTCTCTGCTTGTGCCTATGAAGGATGAGGACCATGGAGCTGCTGGTGCAGATCATGA---------------GGGGGATGCATATACCATCTGTGCAGCAGTAAATGACTGCAACTATTGCATACAGCAATCTTCCCGGACAGGGTGAGGAGCAGTATCTATACATTTTTTCCATACTCATGTTTTTGCTC-TTATTGGGTCAGTTACATACTTTGCGGTATAAATATTTACAACAAGATTCAAGATCCAGCAGAGGAAACAGCAGAAAACGATAAACTTTGGGGATCTAATTCAGAGTTCCATCTTCCCAGAGATACTGGGGTGAAGCTTAATGGCCTGGAAGCCACTGAGCAGGTAGGTGGTGCTGAGGGAAACCCCTCTGGCCACTCTGTGTAGATAGTAGACAAGTTTACATCCAGCCTCATTCAGGAAGGGTTTCAATCCAAAAGCCGCCATTGTCTGAGGGATGCCTTTAGAGAAAAGAACCAGGTTATTGGCTAAGACCAGCTGGCTGAGAATCAGGTCTCTGGGTCTCACTATTTGTGTGGTGACAAAAGTAAAGCTAAAAAAGTAAAGGAGTAGAGAATTTCGGAGGATTCCAGCAGCAGTCTGAATGAGAAAGGTAATACCCTAATTTAAGTTAACAGAAACCAGACCATCCATTTAGAGGAGATGTTGGAGTTTAATTCTATTTCCATCAGAGGAATCTGTTGACTGAAAAATACAATTGAGTGTTTTCACTGT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47333550 19545 + 51301725 T e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=100968.000000 s hg38.chr19_GL949747v2_alt 302584 407 + 729520 ACCCGGTTtcatgcgcttccgtgtgaagagaccactaaacaggctttgtgtgagcagtaaagcttttaatcacctgggtgcaggtgggctgagtccaaaaagagagtcatcgaagggagataggggtggggccattttataggatttgggtaggtaaaggaaaaagaggggttgttctctggtgggcaggtgtgggggtcacaaggtgctccgtagaggagcttttgagccaggatgagccaggagaaggaatttcacaagataatgtcatcagttaaggcaggaacaagccattttcacttcttttgtggtggaatgtcatcagttaaggcag-------------------gaaccagccatctggatgtgtacgtgcaggtcacaggggatatgatggcttagcttgggctcagaggcctgac s panTro4.chr19 59259174 396 + 63644993 ACCCGGTTtcatgcgtgtccgtgtgaagagaccactaaacaggctttgtgtgagcaataaagcttttaatcacctgggtgcaggtgggctgagtcc-aaaatagagtcatcgaagggagataggggtggggccattttataggatttgggtaggtaaaggaaaaagaggggttgttctctggtgggcaggtgtgagggtcacaaggtgctccttaggggagcttt----------tgagccaggagaaggaatttcacaagataatgtcatcagttaaggcaggaataagccattttcacttcttttgtggtggaatgtcatcagttaaggcag-------------------gaaccagccatctggatgtgtacgtgcaggtcacaagggatatgatggcttagcttgggctcagaggcctgac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56112205 423 + 60714840 ACCCAGTTtcatgcgcgtccatgtgaagagaccactaaacaggctttgtgtgagcaataaagcttttaatcacctgggtgcaggcgggctgagtcc--aaaaagagtcagcgaagggagataggggtggggccgttttacaggatttgggtaggtaaaggaaaaaggggggttgttctctggcaggcaga-gtgggggtcacaaggtgctcagtgggggagcttttgagccaggatgagccaggagaagggatttcacaagacaatgtcatcagttaaggcaggaacaggccattttcacttcttttgtggtggaatgtcatcagttaaggcaggaactggccatctggatgtgaactggccatctggatgtgtacgtgcaggtcacaggggatatgatggcttagcttgggctcagaggcctgac i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e nomLeu3.chr10 102874740 0 - 106955855 C e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47333550 19545 + 51301725 T e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=73449.000000 s hg38.chr19_GL949747v2_alt 302991 142 + 729520 aCCCAGAAAATGCCTTTTTCTCACGAAACTCATTATTCCAGGTGAATACAAACATTAAGAACAAACTTGTACAATTacaaagctatttattccaaaattatgatttgtaaaactacaatgacttgaacccacttaatttcaa s panTro4.chr19 59259570 142 + 63644993 aCCCAGAAAATGCCTTTTTCTCACAAAACTCATTATTCCAGGTGAATACAAACATTAAGAACAAACTTGTACTATTacaaagctatttattccaaaattatgatttgtaaaaccacaatgacttgaacccacttaatttcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56112628 142 + 60714840 aCCCAGAAAATGCCTTTTTCTCACAAAACTCATTATTCCAGGTGAATACAaacattaagaacaaacttgtacaattacaaagctatttattccaaaattatgatttgtaaaaccacgatgacttgaacctacttaatttcaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102874740 140 - 106955855 ACCCAGAAAATGACTTTTTCTCACAAAACTCATTATTCCAGGTGAATACAAACATTAAGAACAAACTTGTACAATTACAAAGCTGGTTATTCCAAAATTATGATTTGTAAAACCACAATGACTTGAACCCAC--AATTACAA i nomLeu3.chr10 C 0 I 1162 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47333550 19545 + 51301725 T e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=153953.000000 s hg38.chr19_GL949747v2_alt 303133 594 + 729520 tcaaagaaagactcaataaattcctgggcctccccacagtggagtcctgggcagctgtgggtgagatgaatgagTTATCTTGAAGGCTGACCTTCCAAGACGTGTAGTTGTGTAGTTGGGGTGGCAGGGAGAAAAGAAAAAGAAAGATTCAGGACGTTATCAACAGTTAACTTTATTTTACTCAGAACCAGAGAAAAATGGTATAGTGTTATGTCATTGtgtgtgtattttgtaatctattttttaaaatgaaagattaatcaatacctttaaaagtgggtagttgagagagagagagaaaacagtgcagaggagacagaataaagctagactgacatcattgtgtcttgtttcttgttttggtatagaaatataaacatACctttgggaggctgaggtgggcgaatcgcaagatcaggagttcaagaccagcctggccaacatggtgaaaccccacctctactgaaaataaaaagattagctgggcatggtggcacactcctgtcatcccagctactcgggaggctctgacaggagaattgcttgaacctgggaggtggagattgcagtgagctgagactgtgccactgcatt s panTro4.chr19 59259712 594 + 63644993 tcaaagaaagactcaataaattcctgtgcctccccacagtggagccctgggcagctgtgtgtgagatgaatgagTTATCTTGAAGGCTGACCTTCCAAGACGTGTAGTTTTATGGTTGGGGTGGCAGGGAGAAAAGAAAAAGAAAGATTCAGGACGTTATCAACAGTTAACTTTATTTTACTCAGAACCAGAGAAAAATGGTATCGTGTTATGTCATTGtgtgtgtattttgtaatctattttttaaaatgaaagattaatcaaaacctttaaaagtgggtagttgagagagagagaggaaacagtgcagaggagacagaataaagctagactgacatcattgtgtcttgtttcttgttttggtatagaaatataaacatACctttgggaggctgaagtgggcgaatcgcaagatcaggagttcaagaccagcctggccaacatggtgaaaccccacctctactgaaaataaaaaaattagctgggcatggtggcacactcatgtaatcccagctactcgggaggctctgacaggacaattgcttgaactcgggaggtggagattgcagtgagctgagactgcaccactgcatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56112770 589 + 60714840 tcaaagaaagactcaataaattcctgtgcctctccacagtggagccctgggcagctgtgggtgagatgaatgagTTATCTTGAAGGCTGACCTTCCAAGACACGTAGTTGTGTGGTTGGGGTGGCAGGGAGAAAAGAAAAAGAAAGATTCAGGACATCATCAACAG-----TTTATTTTACTCAGAACCAGAGAAAAATGGTATAGTGTTATGTCATTGTGTGTGTATTTTTTAATCTACTTTTAAAAATGAAAGATTAATCAAAACCTTTAAAAGTGGGTAGTTGAGAGAGAGAGAAAAAACAGTTCAGAGGAGACAGAATAAAGCTAGACTGACATCATTGCGTCTTGTTTCTTGTTTTGGTATAGAAATATAAACATATctttgggaggctgaagtgggcggatcacgagacaaggagttcaagaccagcctggccaacatggtgaaaccccacctctactaaaaataaaaaaattagctgggcatggtggcacactcctgtaatcccagctacttgggaggctgaggcaggagaactgcttgaacccgggaggtggaggttgcagtgagctgagactgcaccactgcatt i ponAbe2.chr19 C 0 I 51 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e nomLeu3.chr10 102874880 1162 - 106955855 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47333550 19545 + 51301725 T e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=85623.000000 s hg38.chr19_GL949747v2_alt 303727 1001 + 729520 tgtagggaccagccccacagggtcggtgggtctctccctgtgtgtggtgacgatagagtgtagaaataaagacacaagacaaagagataaaagaaaaggcagctgcgcccgggggaccactaccaccaatgcgcggagaccggtagtggccccgaatgttgggctgcgctgttatttattggatacaaggcagaaggggcagggtaaagagtgtgagtcacctccaatgataggtaaggtcacgtgggtcacgtgtccactggacagggggcccttccctgcctggcagccgaggcagagagggagaggagacagagagaaagacagcttacgccattatttctgcatatcagggactattagtactttcactaatttactactgctatctagaaggcagagccaggtgtacaggatggaacatgaaggcggactaggagcgtgaccaccgaagcacagcatcacagggagacggttaggcctccggataactgcgggcgagcctgactgatgtcaggccctccacaagaggtggaggagcagagtcttctctaaactcccccggggaaagggagactcccttccccagtctgctaagtagcgggtgttgttccttgccacttacgctaccgctagaccacggtccgcttggcaacggacgtcttcccagacgctggcgtcaccgctagaccaaggagccctctggtggccctgtccgggcatgacagagggctcgcactcttgtcttctggtcacttctcactgtgtcccctcagctcctatctctgtatggcctggcttttcctaggttatgattacagagggaggattattataatattgggataaagggtaactgctacaaacaaatgattaatgatattcatatataatcataactaagatctatatctggtataactattcttgttttatattttattatactggaacagctcgtgtcctctgtctcttgcctcggcacctgggtggcttgccac s panTro4.chr19 59260306 980 + 63644993 tgtagggaccagccccacagggtcggtgggtctctccctgtgtgtggtgacgagagagtgtagaaataaagacacaagacaaagagataaaagaaaaggcagctgggcccgggggaccactaccaccaatgcgtggagaccggtagtggccccgaatgtcgggctgcgctgttatttattggatacaaggcagaaggggcagggtaaagcgtgtgagtcatctccaatgataggtaaggtcacgtgggtcacgagtccactggacagggggcccttccctgcctggcagccgaggcagagagagagaggagacagagagaaagacagcttacaccattatttctgcatatcagggactattagtactttcactaatttaccactgctatctagaaggcagagccaggtgtacaggatggaatatgaaggcggactaggagcgtgaccactgaagcacagcatcacagggagacggttaggcctccggataactgtgggcgagcctgactgatgtcaggccctccacaagaggtggaggagcagagtcttctctaacctcccccagggaaagggagactccctttcccggtctgctaagtagcgggtgttgttccttgccacttacgctaccgctagaccacg------------------gtcttcccaaatactggcgtcaccgctagaccaaggagccctctggtggccctctctgggcataacagaaggctctcactcttgtcttctggtcacacctcac--tgtcccctcagctcctatctctgtatggcctggtttttcctaggctatgattatagagtgaggattattataatattggaataaaaagt-attgctacaaactaatgattaatgatattcatatataatcatatctaagatctgtatctggtataactattcttgttttatattttcttatactggaacagcttgtgtcctctgtctcttgcctcggcacctgggtggcttgccgc i panTro4.chr19 C 0 C 0 e canFam3.chr1 19731686 720 - 122678785 I e ponAbe2.chr19 56113359 51 + 60714840 I e calJac3.chr22 45524842 38011 + 49145316 I e nomLeu3.chr10 102874880 1162 - 106955855 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47333550 19545 + 51301725 T e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=13130.000000 s hg38.chr19_GL949747v2_alt 304728 68 + 729520 ccacagcattctagcctgggcgac-gagcaagactccgtttaaa-------aatatatatatatacatatataaac s panTro4.chr19 59261286 65 + 63644993 ccacagcattctagcctgggcgac-gagcaagactccatttaaa----------aTATATATATATATATAAAAAC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102876042 76 - 106955855 ccactgcattccagcctgggtgacagagcaaggctccattaaaaaaaaaaaaaaatatatatatatatatagaaac i nomLeu3.chr10 I 1162 C 0 e canFam3.chr1 19731686 720 - 122678785 I e ponAbe2.chr19 56113359 51 + 60714840 I e calJac3.chr22 45524842 38011 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47333550 19545 + 51301725 T e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=154862.000000 s hg38.chr19_GL949747v2_alt 304796 304 + 729520 --atattcctgaatgtctatactataaaatatttttaaatataacttataaatctaaagataataCCTTAAAAAAGGAAATAGAATTGAGTTCCTATCAAATTAGGGCATTACTAAACAAGGAAGAATTATTTGTACTAGAATGTAAGCAAAATTACTTGACCatatattttataatgcatatattatttatcatattatataataaatgtatacttttaaatcaaattatatattatgtagtgacatatagttaatattattatataattttgactatatataGTAAAACATAAGTGAATACACC s panTro4.chr19 59261351 301 + 63644993 --ATATTCTTGAATGTCTATACtataaaatatttttaaatataacttataaatCTAAAGATAATACCTTAAAAAGGGAAATAGAATTGAGTTCCTATCAAATTAGGGCATTACTAAACAAGGAAGAATTATTTGTACTAGAATGTAAGCAAAATTATTTGACCatatattttataatgcatatattatttatcatattatataataaatgtatacttttaaatcaaattatatattatGTAGTGACATATAGTTAA---TATTATATAATTTTGACTATATATAGTAAAACATAAGTGAATACACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56113410 301 + 60714840 --ATATTCTTGAATGTCTATACtataaaatatttttaaatataaCTTACAAATCTAAAGATAACACCTTAAAAAAGGAAATAGAATTCAGTTCCTATCAAATTAGGGCATTACTAAACAAGGAGGAGTTATTTGTACTAGAATGTAAGCAAAATTATTTGACCatatattttataatgaatatattatttatcaaattatataataaatgtatactttttaatcaaattatatattatGTAGTGACATATAGTTAA---TATTATATAATTTTGACTATATATAGTAAAACATAAATGAATACACC i ponAbe2.chr19 I 51 C 0 s nomLeu3.chr10 102876118 302 - 106955855 atatattcttgaatgtctacactataaaatattttaaaatataacttataaatctaaAGATAATACCTTAGAAAAGGAAATAGAATTGAGTTCCTATCAAATTAGGGCATTACTAAACAAGGAGGAATTATTTGTACTAGAATGTAAGCAAAATTATTTGACCatatattttataatgcatata----ttatcatattatataataaatgcatactttttaatcaaattatatattatgtagtgacatatagttaatattattatataATTTTGACTACATATAGTAAAACATAAGTGAATACACC i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47333550 19545 + 51301725 T e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=668528.000000 s hg38.chr19_GL949747v2_alt 305100 728 + 729520 CTC-AAAAATGTTTAATTCTTA-AAATATGTATGGTCAAAAATTCTAAA--TTTCATcctagagaaatagctgactccacattcggagagaaaatacaggagatgaagtcagaacttcttatcatgcaagaaagcaaagacatcaccacataccatcagattcatgttacctgaacataaagtctatc--atgaaaagttcccaatggcaaaatgtggaatatttatagaatcaaataatataggtagtgtattaaaactaatgaatatgttcaaagcctatcagtttaCTACTGTTAAAAACAAAATTAAAAAACAAAAAACCCCTCAAATATGAGGAATGGGAAAAGAACAAAATCTCCACATCAAAAACGTGGAAATGAAGGCAAGAAGCAAGATCTCTTTTGTTTATCTGAAGTGTTACACAGGAAACATTC---TTTTCTGTAGAATGTTTCTACATAATAATAAGTATAGTAATAGCTATAGTAATGTTTTTGCCTAAGAATAGCTGTAGAGTTTTTGCATAATAATAGTTAACCCTGCAAAGCTTGGATAACCTGTGCGTTGAGTATACaagcaataaacatcaatggctgccaaaacccttaggctgaaggttgatagtgaatataataacgagtggatcctgctgatagtacAGCCATCAGTACAGAATTGCAAGGTGGAGAATGCAAGACACAAGCAAATGAGCCATTGTGTCTCACTTCTGACATT s panTro4.chr19 59261652 728 + 63644993 CTC-AAAAATGTTTAATTCTTA-AAATATGTATGGTCAAAAATTCTAAA--TTTCATcctagagaaatagctgactccacattcggagagaaaatacaggagatgaagtcagaacttcttatcatgcaagaaagcaaagacatcaccacataccatcagattcatgttacctgaacataaagtctatc--atgaaaagttcccaatggcaaaatgtggaatatttatagaatcaaataatataggtagtgtattaaaactaatgaatatgttcaaagcctatcagtttactactgttaaaaacaaAATTAAAAAACAAAAAACCCCTCAAATATGAGGAATGGGAAAAGAACAAAATCTCCACATCAAAAACGTGGAAATGAAGGCAAGAAGCAAGATCTCTTTTGTTTATCTGAAGTGTTACACAGGAAACATTC---TTTTCTGTAGAATGTTTCTACACAATAATAAGTACAGTAATAGCTATAGTAATGTTTTTGCCTAAGAATAGCTGTAGAGTTTTTGCATAATAATAGTCAACCCTGCAAAGCTTGGATAACCTATGCATTGAGTATACaagcaataaacatcaatggctgccaaaacccttaggctgaaggttgatagtgaatataataatgagtggatcctgctgatactacAGCCATCAGTACAGAATTGCAATGTGGAGAATGCAAGACACAAGCAAATGAGCCATTGTGTCTCACTTCTGACATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56113711 728 + 60714840 CTCAAAAAATGTTTAATTCTTA-AAATATGTACGGTCAAAAATTCTAAA--TTTCATcctagagaaacagctgactccacatttagacagaaaatataggagatgaagtcggaacttcttatcatacaagaaagcaaagaCATCACCTCATACCATCAGATTcatgttacctgaacataaagtctatc--atgaaaagttcccaagggcgaaatgtggaatatttatagaatcaaataatataggtagtgtattaaaactaatgaatacgttcaaagcctatctgtttacaactgttaaaaacaaaattaaaaaacaaaaaaCCCCTCAAATATGAGGAATGGT-AAAGAACCAAATCCCCACATCAAAAACGTAGAAATGAAGGCAAGAAGCAAGATCTCTTTTGTTTATCTGAAGTGTTACACAGGAAACATTC---TTTTCTGTAGAATGTTTCTACATAATAATAAGTATAGTAATAGCTATAGTAATGTTTTTGCCTAAGAATAGCTGTAGAGTTTTTGCATAATAATAGTTAACCCTGCAAAGCTTGGATAACCTGTGCATTGAGTATACAAGAAATAAACATCAATGGCTACCAAAACCCTTAGGCAGAAGGTTGATAGTGAATATAATAATGAGTGGATCCTGCTGATGGTACAGCCATCGGTACAGAGTGGCAATCTGGAGAATGCAAGACACAAGCAAATGAGCCATTGTCTCTCACTTCTGACATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102876420 728 - 106955855 CTCAAAAAAAGTTTAATTCTTA-AAATATGTATGGTCAAAAATTCTAAA--TTTCAtcctagagaaatagctgactccacattcggacagaaaatacaggagatgaagtcagaacttcttatcacacaagaaagcaaagacatcaccacataccatcagattcatgttacctgaacataaagtctatc--atgaaaagttcccaatggcaaaatgtggaatatttatagaatcaaataatataggtagtgtattaaaactaatgaaTATGTTCAAAGCCTATCTGTTTACTACTGTTAAAAACAAAATTAAAAAACAAAAAACCCCTCAAATATGAGGAATGGT-AAAGAACCAAATTCCCACATCAAAAATGTGGAAATAAAGGCAAGAAGCAAGATCTCTTTTGTTTATCTGAAGTGTTACACAGGAAACACTC---TTTTCTGTAGAATGTTTCTACATAATAATAAGTATAGTAACAGCTATAGTAATGTTTTTGCCTAAGAATAACTGTAGAGTTTTTGCATAATAATAGTTAACCCTGCAAAGCTTGGATAACCTGTGCATTGAGTATACaagcaataaacatcaatggctgccaaaacccttaggctgaaggttgatagtgaatataataatgagtggatcctgctgaTGGTACAGCCATCGGTACAGAATTGCAATGTGGAGAATGCAAGACACAAGCAAATGCACCATTGTGTCTCACTTCTGACATT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55207291 664 + 59248254 ccC-AAAAATATTTAACATTGATAAATATATGTTGTCAGGATTTTAACTTTTTTTttcctgaagaaatggttgaagctaccttaggacagaaactataggagatgaactcagaaccccttattgttcaaaagagcaaaggagtcaccaagtaccctcagactcatgtgaccagaagaaaaagggttcccaatggaggattcttattggcaaagtgtgggacatttatagcatcaaataatatttgtaatggataaaa---aatgaatagatacaaactctatgtgtttaataccgctataaacaaaat---acaacatacaacacttcacatttgggatatggt-aaagaaccaaatcactacattgcaaagttgcaaatggaggcaagacccaagtgctctcttttctctatgaagtacttcacaggaaacattctttttctctgtagaat-tttccacctaataa------------------------------tgtcaaagagtggacata----------------------------------cttgggtaatctgtgtattgcgtgtataggcaataaagaccaatggctgccccaaccctgaggttacaggtcaatgctaaatataaaaatgggtggatccagttgaagatacAGCCATAGGGGCAGAATTGCAAAATGGAGAATGCAAGACACAAGCAAATGAGTTACTGTGTCTCAGTTCTGACATT i macFas5.chr19 T 16998 I 21040 s papAnu2.chr19 47314005 663 + 51301725 ccc-aaaaatatttaacattgataaatatatgttgtcaggattttaacattttttttcccgGAGAAATGGTTGAAGCTACCTTAGGACAGAAACTATAGGAGATGAACTCAGAACCCCTTATTGTTCAAAAGAGCAAAGGAGTCACCAAGTACCCTCAGACTCATGTGACCAGAAGAAAAAGGGTTCCCAATGGAGGATTCTTATTGGCAAAGTGTGGGACATTTATAGCatcaaataatatttgtaatgGATAAAA---AATGAATAGATACAAACTCTATGTGTTTAATACCGctataaacaaaat---acaacataCAACACTTCACATTTGGGATATGGT-AAAGAACCAAATCACTACATTGCAAAGCTGCAAATGGAGGCAAGACCCAAGTGCTCTCTTTTCTCTAAGAAGTACTTCACAGGAAACATTC-TTTTCTCTGTAGAAT-TTTCCACCTAATAA------------------------------TGTCAAAGAGTGGACATA----------------------------------CTTGGGTAATCTGTGTATTGCGTGTATAGGCAATAAAGACCAATGGCTGCCCCAACCCTGAGGTTGCAGGTCAATGCTAAATATAAAAATGGGTGGATCCAGTTGAAGATACAGCCATAGAGGCAGAATTGCAAAATGGAGAATGCAAGACACAAGCAAATGAGTTACTGTGTCTCAGTTctgacatt i papAnu2.chr19 T 19545 I 21315 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=21260.000000 s hg38.chr19_GL949747v2_alt 305828 41 + 729520 TTCTAAGCATCTTTTTCACCATACCCTCAAATCTAGACCGT s panTro4.chr19 59262380 41 + 63644993 TTCTAAGCATCTTTTTTACCATACTCTCAAATCTAGACCGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56114439 41 + 60714840 TTCTAAGCATCTTTGTTACCATACCCTCAAATCTAGACCGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102877148 41 - 106955855 TTCTAAGCATCTTTGTTACCACACCCTCAAATCTAGACCGT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47314668 21315 + 51301725 I e macFas5.chr19 55207955 21040 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I a score=1206645.000000 s hg38.chr19_GL949747v2_alt 305869 989 + 729520 tatctggctgggcgtctctatgtttcttggatttgtgtgtcaaactctctagcgagtttaggaaaatattcatggactatatcctcaaatatattttccaagttgcttattctctcttcccctttcaggaatgctgacaagtcatacatttggtgtctttagataatatcatatttctcagagattttgttcacttttaaaaatattttttccttatatttgactgatttgattcaaacaagtcttcaagctttgaaattcttttcctcagcttggtctattctgctgttaatgcttctcatcgtattatgaaattcgtgtcatgaatttttcagctcgagaagttcagtttgggtgtttcttaaaatttaatcgttcatgtcattaatcattttactggattgcttggcttccttggattgaatttcaactttgctcttgatttgaatgaccttccttgccatccagattccaaattctacgtttgtcatttcagacaattcatactgattaagaacaatttctggggagctcg-----tggactggtttggagataataggagttatttccctgattttttttctcatctgggagggttgctattcctttcattgcaagggtataaattgagtatagtctgttggctttatttctggaagttttcaggggactaaggctctgtacagggtctttgc---tgaattcttgctcttggtt--ttccaggcggtagaatttagtaaagtgatttttggtgttgtagtgtggctgtaatccagtagatggcgcttgagagcaataggcaatagacaggctcttactccactgcgtggtgcctttgtTTATCTTTGTTCTTGACCTTGATACTTTTGAAAAGGTCAGAGCAG-tttttttgtttttgttttttgagacagggtctcactttgtcacccagggtggagtgcagtggcacgatcttggatcactgcagcctcaaccttcccaggctcaggTAGGT s panTro4.chr19 59262421 994 + 63644993 tatctggctgggcgtctctatgtttcttggatttgtgtgtcaaactctctagcgagtttaggaaaatattcatggactatgtcctcaaatatattttccaagttgcttattctctcttcccctttcaggaatgctgacaagtcatacatttggtgtctttagataatatcatatttctcagagattttgttcacttttaaaaatattttttccttatatttgacggatttgattcaaacaagtcttcaagctttgaaattcttttcctcagcttggtctgttctgctgttaatgcttctcatcgtattatgaaattcgtgtcatgaatttttcagctcgagaagttcagtttgggtgtttcttaaaatttaatcgttcatgtcattaatcattttactggattgcttggcttccttggattgaatttcaactttgctcttgatttgaatgaccttccttgccatccagattccaaattctacgtttctcatttcagacaattcatactgattaagaacaatttctggggagctcgtggactggactggtttggagataataggagttatttccctgattttttttctcatctgggaggtttgctattcctttcattgcaagggtataaattgagtatagtctgttggctttatttctggaagttttcaggggactaaggctctgtacagggtctttgc---tgaattcttgctcttggtt--ttccaggcgatagaatttagtaaagtgatttttggtgttgtagtgtggctgcgatccagtagatggcgcttgagagcaataggcaatagacaggctcttactccgctgcgtcgtgcctttgCTTATCTTTGTTCTTGACCTTGATACTTTTGAAAAGGTCAGAGCAG-tttttttgtttttgttttttgagacagggtctcactttgtcacccagggtggagtgcagtggcacgatcttggatcactgcagcctcaaccttcccaggctcaggTAGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56114480 988 + 60714840 tacctggctgggtgtctctgtgtttcttgtatttgtgagtcaaactctctagcgagtttaggaaaatattcatggactatatcctcaaatatattttccaagttgcttattctctcttcccctttcaggaatgctgacaagtcatacatttggtgtctttagataatatcatatttctcagagattttgttcacttttaaaaatattttttccttatatttgactgatttgattcgaacaagtcttcaagctttgaaattcttttccccagtttggtctattctgctgttattgcttcgcatcgtattatgaaattcgtgtcatgaattttgcagctcaagaagttcagtttgggtctttcttaaagtttaatcgttcatgtcattaatcattttattggattgcttggcttccttggattgagtttcgactttgctcttgatttgaatgacctttcttgccatccagattccaaattctatgtttgtcatttcagacaattcatgccgattaagaaaaacttttggggagctcg-----tgggctggtttggagataataggagttatttccctga-ttttttcctcatctgggagggttgctattcctctcattgcaagagtagaaactgagtatagtctgttggctttgtttctggaagttttcagatgactaaggctctgtacagggtctttgttgatgaattcttgctcttggtt--ttccaggcgatagaatttagt--agtgatttttggtgttgtagtgtggctgcga-ccagtagatggcgcttgagagcaacaggcaatagacaggctcctactccactgcgtggtgcctttgCTTATCTTTGTTCTTGACCTTGATACTTTTGAAAAGGTCAGAGCAG-tttttttgtttttgttttttgagacagggtctcactttgtcacccagggtggagtgcagtggcacgatcttggatcactgcagcctcaaccttcccaggctcaggtaggt i ponAbe2.chr19 C 0 I 1183 s nomLeu3.chr10 102877189 990 - 106955855 TATCTGGTTCAGCAtcactatgtttcttggatttgtgtgtcaaactctctagcgagtttaggaaaatattcatggaccatatcctc-aatatactttccaagttccttattctctcttcccctttcaggaatgctgacaagtcatacatttggtgtctttagataatgtcatatttctcagagattttgttcacttgtaaaaatattttttccttatatttgactgatttgattcaaacaagtcttcaagctttgaaattcttttcctcagcttgatctattctgctgttaatgcttctcatcgtattatgaaatttgtgtcatgaatttttcagctcaagtagttcagtttgggtctttcttaaaattgaatcgttcatgtcattaatcattttactggattgcttggcttccttggattgagtttcaactttgctcttgatttgaatgaccttcctttccatccagattccagattctacgtttgtcatttcagacaattcatactgattaagaacaatttctggggagctcg-----cgggctgatttggagataataggagttatttccctga-tttttttctcatctgggagggttgctattccttcgattgcaagggtataaattgagtatagtctgttggctttatttctggaagttttcagaggactaaggctctgtacagggtctttgttgatgaattcttgctgttggtt--ttccaggcggtagaatttgataaagtgatttttggtgttgtagtgtggctgcgatccagtagatggcgcttgagagcaataggcaatagacaggctcttactccactgcgtggtgcctttgCTTATCTTTGTTCTTGACCTTGATACTTTTGAAAAGGTCAGAGCAG-tttttttgttcttgttttttgagacagggtctcactctgtcacccagggtggagtgcagtggcacgctcttggatcactgcagcctcaaccttcccaggctcaggtaggt i nomLeu3.chr10 C 0 I 1169 s macFas5.chr19 55228995 970 + 59248254 tatctggctggacgtctctgtgtttcttggatttgtgtgtcaaa--ctctagcgagtttaggaaaatattcatggactatatcctcaaatatattttccaagttgcttattctctc-tcctctttcaggaatgctgacaagtcatatatttggtctctttagataatg---tatttctcagagattttgttcatttttaaaagtattttttctttatatttgactgatttgattcaaacaagtcttcaagctttgacattcttttcctcagcttggtctattctgctgttaatgcttctccacgtattatgaaattcgcgtcgtgaatttttcaactcaagtagttcagtttgggtctttcttaaaatttaatcgttcatgtcattaatcacgttactggattgcttgggttccttggattgagtttcaactttgttcttgatttgaatgaccttccttgcgatccagattccaaattctacgtttgtcatttgagacaattcatactgattaaggacaatttctggggagttcg-----tgggctggtttggagatactaggagtcatttccctga-tttttttctcatctgggagggttgctattcctttcattgcaagggtataagttgagtatagtctgttggctttatttctggaagttttcagacaactaaggcattga----------------tgaattcttgctcttggtttcttccaggcggtagaattgagt--agtgattcttggtgttgtcgtttggctgcgatccagtagacggcgcttgagagcaacaggcaacagacaggctcgcactccactacgtggtgcctttgCTGACCTTTGTTCTCGACCTTGATACTTTTGAAAAGGTCAGAGCCGttttttttgtttttgttttctgagacagggtctcactttgtcccccaggctgcagtgcagtggcacgatcttggatcactgcagcctcaaccttcccaggctcaggtgggt i macFas5.chr19 I 21040 C 0 s papAnu2.chr19 47335983 970 + 51301725 TATCTGGCTGGACGCCTCTGTGTTTCTTGGATTTGTGTGTCAAA--CTCGAGCGAGTTTAGGAAAATATTCATGGACTgtatcctcaaatatattttccaagttgcttattctctc-tcctctttcaggAATGCTGACAAGACATATATTTGGTCTCtttagataata---tatttctcagagattttgttcatttttaaaagtattttttctttatatttgactGCTTTGATTCAAACAAGTCTTCAAGCTTtgacattcttttcctcagcttggtctattctgctgttaatgctTCTCCACGTATGATGAAATTCGCGTCGTGAATTTTTCAACTCAAGTAGTTCAGTTTGGgtctttcttaaaatttaatcGTTCATGTCATTAATCACGTTACTGGATTGCTTGGGTTCCTTGGATTGAGTTTCAACTTTGTTCTTGATTTGAATGACCTTCCTTGCGATCCAGATTCCAAATTCTACGTTTGTCATTTGAGACAATTCATATTGATTAAGGACAATTTCTGGGGAGTTCG-----TGGGCTGGTTTGGAGATACTAGGAGTTatttccctga-tttttttctCACCTGGGAGGGTTGCTATTCCTTTCATTGCAAGGGTATAAGTTGAGTATAGTctgctggctttatttctggaagttTTCAGACAACAAAGGCATTGA----------------TGAATTCGTGCTCTTGGTTTCTTCCAGGCGGTAGAATTCAGT--AGTGGTTTTCGGTGTTGTCGTTTGGCTGCGATCCAGTAGATGGCGCCCGAGAGCAACAGGCAACAGATAGGCTCGCACTCCACTACGTGGTGCCTTTGCTGACCTTTGTTCTCGACCTTGATACTTTTGAAAAGGTCAGagccgttttttttgtttttgttttctgagacagggtctcactttgtcccccaggctgcagtgcagtggcacgatctcggatcactgcagcctcaaccttcccaggctcaggtgggt i papAnu2.chr19 I 21315 C 0 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=2865.000000 s hg38.chr19_GL949747v2_alt 306858 2 + 729520 GA s panTro4.chr19 59263415 2 + 63644993 GA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56116651 2 + 60714840 gA i ponAbe2.chr19 I 1183 C 0 s nomLeu3.chr10 102879348 2 - 106955855 GA i nomLeu3.chr10 I 1169 C 0 s macFas5.chr19 55229965 2 + 59248254 ga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47336953 2 + 51301725 ga i papAnu2.chr19 C 0 I 630 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=1000.000000 s hg38.chr19_GL949747v2_alt 306860 1 + 729520 C s panTro4.chr19 59263417 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56116653 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102879350 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55229967 1 + 59248254 c i macFas5.chr19 C 0 I 629 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e rheMac3.chr19 60137520 5568 + 64156825 I a score=541982.000000 s hg38.chr19_GL949747v2_alt 306861 1023 + 729520 AGAGCAGGCAAGTTAACTTAAGGCCTCCTCCTTGGCAATCTGGTCTCAAGTAGGGGACAGGTCCCCACAGACAGAACTGAGGGGCAAGTGTGGCATGGGCTCCAGACCCCGAGCACTGGAATTAGACACCTCTCCTTTGCAGAAAGGTTTAGCCTTTCCTCAAGCGGTTCTGCAAAGGAGAGGTGTAGCTGGGGTGGCGTGGGCAATGGTGGTGGCAGAGTTTGTGTGAAACTTGTCTCTTCCCCAATCACTGTcacttgtttcaggagacgttgtaatgtgctgtatggtttgacctccaggccagtaggtggcaattgctggtgagagccagttgtagcgctggcagtgggctttatgcttgacctttgttaaccagaagcattcaggtatcctaagtgatgggttgggttgtggaaaactcagtggtcttgatcagtactctgcctccaacgcagggaaatgaaggtaagtgtggctggtccaggcaagcctgtactcaggcccaatgctaggcacaggctccGTCCCCACAGAGGCTACATGTGTGGTTCTCAGGTCCCTGGAGAGACACTCAAGCACTGAGTAGGGCAATGACTATTATGCCAAAGTTACAGCAGAGTTCCCCAGAGGGGCACGTTGGGTTCCAAGCCTAGAAAATGACAGTGGGACTCACTTTAATCTAATGCTCCCAACCCAGCAGAGCTCCTCCCTGTGGCCCAATGCTGGAAGCAATTTCAGACCGTCAAATCACATGCGGTTTGATGTCAGACCACTCAACTACCCCAGGCCACAGATCTTGCCTCCTGGGTAAAATCCATGCCTCTCAGGCTACAACTTTTCCCCCTCGGTTCTGTCAAAGAGAGGTGTCCAACGCCAGTGCTTGGTGTCTGGAGCCCATGCCACAATTGCCTCTCAGTTCTGTCCATGGGGACCTGTCTTCTACTTGAGCCCAGATTGTCAATCTCTGGCCCAAGACTCTCCGAAGTAGTGACCCTCACCCATGTTTGATGTCAAGttc--------tt s panTro4.chr19 59263418 1031 + 63644993 AGAGCAGGCAAGTGAACTTAAGGCCTCCTCCTTGGCAATCTGGTCTCAAGTAGGGGACAGGTCCCCACAGACAGAACTGAGGGGCAAGTGTGGCATGGGCTCCAGACACCGAGCACTGGAATTAGACACCTCTCCTTTGCAGAAAGGTTTAGCCTTTCCTCAAGCGGTTCTGCAAAGGAGAGGTgtagctggggtggcgtgggcaatggtggtggcagagtttgtgtgaagcttgtctcttccccactcaccgtcacttgtttcaggagacgttgtaatgtgctgtatggtttgacctccaggccagtaggtggcacttgctggtgagagccagttgtagcgctggcagtgggctttatgcttgacctttgttaaccggaagtattcaggtatcctaagtgatgggttgggttgtggaaaactcagtggtcttgatcagtactctgcctccagcgcagggaaatgaaggtaagtgtggctggtccaggcaagccagtactcaggcccaatgctaggcacaggctccgtccccacagaggctccatgtgtggttctcaggtccctggagaggcactgaagcactgagGAGAGCAATGACTATTATGCCAAAGTTACAGCAGAGTTCCCCAGAGGGGCACGTTGGGTTCCAAGCCTAGAAAATGGCAGTGGGACTCACTTTAATCTAATGCTCCCAACCCAGCAGAGCTCCTCCCTGTGGCCCAATGCTGGAAGCAATTTCAGACCATCAAATCACATGCGGTTTGACGTCAGACCACTCAACTACCCCAGGCCACAGATCTTGCCTCCTGGGTAAAATCCATGCCTCTCAGGCTAAAACTTTTCCCACGCGGTTCTGCAAAAGAGAGTTGTCCAACGCCAGTGCTTGGTGTCTGGAGCCCATGCCACACTTGCCTCTCAGTTCTGTCCATGGGGACCTGTCTTCTACTTGAGCCCAGATTGTCAATCTCTGGCCCAAGACTCTCCAAAGTAGTGACCCTCACCCATGTTTGATGTCAAGttctttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56116654 1020 + 60714840 AGAGCAGGCAAGTGAACTTAAGGCCTCCTCCTTGGCAATCTGGTCGCAAGTAGGGGACAGGTCCCCACAGACAGAACTGAGAGGCAAGTGTGGCATGGGTTCCAGACACCAAACACTGGAGTTAGACACCTCTCCTTTGCAGAAAAGTTTAGCCTTTCCTCAAGCAGTTCTGC-AAGGAGAGGTGTAGCTGGGGTCACGTGGGCAATGGTGGTGGCAGAGTTTGTGTgaagcttgtctcttccccaatcactgtcacttgtttcaggagacgttgtaatgtgctatatggtttgacctccaggccagtaggtggcacttgctggtgagagccagttgtagtgctggcagtgggctttatgtttgacctttgttaaccggaagtattcaggtatcctaagtaatgggttgggttgtggaaacctcagtggtcttgattagtgctctacctccaaggcagggaaatgaaggtaggtgtggctggtccaggcaagcctgtactcaggcccaatggtaggcaccagcTCTGTCCCCACAGGGGCTCCGTGTGCAGTTCTCAGTTCCCTGGAGAGACAATCAAGCACTGAGTAGAGCAATGACTATTATGCCAAAGTTACAGCAGAGTTCCCCAGAGGGGCACATTGGGTTCCAAGCCTAGAAAATGGCAGTGGGACTCACTTTAATCTAATGCTCCCAACCCAGCAGAGCTCCTCCCTGTGGCCCAATGCTGGAAGCAATTTCAGACAGTCAAATCACATGCGGTTTGACGTCAGACCACTCAACTACCCCAGGCCACAGATCTTACCTCCTGGGTAAAATCCATGCCTCTCAGGCTAAAACTTTTCCCATGCGGTTCTGCAAAAGAGAGGTGTCCAACTCCAGTGCTTGGTGTCTGGAGCCCATGCCACACTTGCCTCTCAGTTCTGTCCATGGGGACCTGTCTTCTACTTGAGCCCAGATTGTCAATCTCTGGCCCAAGACTCTCCAAAGTAGTGACCCTCACCCATGCTTGATGTCAAGttc---------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102879351 1023 - 106955855 AGAGCAGGCAAGTGAACTTAAGTCCTCCTCCTTGGCAATCTGGTCTCAAGTAGGGGACAGATCCCCACAGACAGAACTGAGAGGCAAGTGTGGCATGGGCTCCAGACACCAAGCACTGGAGTTAGACACCTCTCCTTTGCAGAAAGGTTTAGCCTTTCCTCAAGCAGTTCTGCAAAGGAGAGGTgtagctggggtggcgtgggcaatggtggtggctgagtttgtgtgaagcttgtctctttcccaatcactgtcacttgtttcaggagacgttgtaatgtgctgtatggtttgacctccaggccagtaggtggcacttgctggtgagagccagctgtagcgctggcagtgggctttatgcttgacctttgttaaccggaagtattcaggtatcctaagtgatgggttgggttgtggaaacctcagtggtcttgatcagtgctctgcctccaaggcagggaaatgaaagtaggtgtggctggtccaggcaagcctgtactcaggcccaatggtaggcacaagctctgtccccacaggggttccgtgtggggttctcaggtccctggagagacactccggCACAGAGTAGAGCAATGACTATTATGCCAAAGTTACAGCAGAGTTCCCCAGAGGGGCATGTTGGGTTCCAAGCCTAGAAAATGGCAGTGGGACTCACTTTAATCTAATGCTCCCAACTCAGCAGAGCTCCTCCCTGTGGCCCAATGCTGGAAGCAATTTCAGACAGTCAAATCACATGCAGTTTGACGTCAGACCACTCAACTACCCCAGGCCACAGATCTTGCCTCCTGGGTAAAATCCATGCCTTTCAGGCTAAAACTTTTCCCACGCAGTTCTACCAAAGAGAGGTGTCCAACTCCAGTGCTTGGTGTCTGGAGCCCATGCCACACTTGCCTCTCAGTTCTGTCCATGGGGACCTGTCTTCTACTTGAGCCCAGATTGCCAATCTCTGGCCCAAGACTCTCCAAAGTAGTGACCCTCACCCATGCTTGATGTCAAGTTC--------TT i nomLeu3.chr10 C 0 I 1060 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I a score=56791.000000 s hg38.chr19_GL949747v2_alt 307884 215 + 729520 ttttttttttttgagacggagtctcgctctgtcgcccaggctggagtgcagtggcgtgatctcagctcactgcaagcttcgcctcccaggttcgtgccattctcctgcctcagcctcccgagtagctgggactacaggcacccaccaccgtgcccggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctt s panTro4.chr19 59264449 215 + 63644993 ttttttttttttgagatggagtctcgctctgtcgcccaggctggagtgcagtggcgtgatctcagctcactgcaagcttcgcctcccaggttcgtgccattctcctgcctcagcctcccaagtagctgggactacaggcacccgccaccgtgcccagctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56117674 212 + 60714840 ---tttttttttgagacggagtctcgctctgtcacccaggctggagtgcagtggtgcaatctcggctcactgcaagctccgcctcctgggttcgtgccattctcctgcctcagcctctcgagtagctgggactacaggcacctgccactgcgcccggctaattttttgtatttttagtagaaacggggtttcaccgtgttagccaggatggtctt i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e nomLeu3.chr10 102880374 1060 - 106955855 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I a score=11653.000000 s hg38.chr19_GL949747v2_alt 308099 134 + 729520 gaactcctgacctcgtgatccgcctgcctcggcctcccaaagtgctgggattacaagcatgagccaccacgcccagctaattttttgtatttttagtagagacggggtttcaccgtgttagtcaggatggtctc s panTro4.chr19 59264664 134 + 63644993 gaactcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggctaattttttgtatttttagtagagacggggtttcaccgttttacccaggatggtctc i panTro4.chr19 C 0 C 0 e canFam3.chr1 19731686 720 - 122678785 I e ponAbe2.chr19 56117886 0 + 60714840 C e calJac3.chr22 45524842 38011 + 49145316 I e nomLeu3.chr10 102880374 1060 - 106955855 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I a score=3928.000000 s hg38.chr19_GL949747v2_alt 308233 15 + 729520 gatctcctgacctcg s panTro4.chr19 59264798 15 + 63644993 gatctccggacctcg i panTro4.chr19 C 0 T 15490 s ponAbe2.chr19 56117886 15 + 60714840 gatctcctgacctcg i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e nomLeu3.chr10 102880374 1060 - 106955855 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I a score=71101.000000 s hg38.chr19_GL949747v2_alt 308248 817 + 729520 tgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgccgggccGATGTCAAGTTCTTGCACTGCCCACTAAGGGTTAGgatcaggaatggcctctttctatcagcatccaggtctgggagcacacatggagcacttccctgggcccttccttttcacagtcctcccgctgttccctaagtcagatccagggcttaggtcggtcaaagagctccccagtggcctggattgcctggctccccactgagaatgggtatcatgtggtctcataacttccctctcaggcactggaagttcactcatggttttctgccaggtcttgctgcatgagctgctgcctgccttctttttagcagtatctgagatttccttcactttcatattcaactcctgtattagtccattttcaggctgctgataaagacatacccgagaccaggtaatttataagaaaaagagatttaattgactcacagttccacatggctgcagaggcctcacaatcatggtggaaggtgaaagcaacatctcacgtggtggcaggtacagaggaaatgagag--ccaagcaaaaggggaaaccccttataaaatcatcagctcttctgagacttattcacgaccacaagaacagaatgggagaaactgcctccatgattcagttatctcccaccggctcccacagcacgtgggaattatgggagctacaattcaagatgagatttgggtggggacacagccaaaccatatcacctcccatgttctttcttggatacaagaatgcagaatgaatctctacaca s ponAbe2.chr19 56117901 817 + 60714840 tgatccacccgcctcggcctcccaaattgctgggattacaggcgtgagccaccatgcctggccAGTGTCAAGTTCTTGCACTCTCCACTAAGGGTTAGgatcaggaatggcctctttctatcagcatccaggtctgggagcacgcatggagcacttccctgggcccttccttttcacagtcctcccactgttccctaagtcagatccagcacttaggtcggtcaaagagctccccagtggcctggattgcctggctccccactgagaatgggtatcatgtggtctcataatttccctctcaggcgctggaagttcactcatggttttctgccaggccttgctgcatgagctgctgcctgccttctttttagca-tatctgagatttccttcactttcatattgaactcctgtattagtccgttttcaggctactgataaagacatacccgagactgggtaatttataagaaaaagaggtttaattgactcacagttccacatggctgcagaggcctcacaatcatggtggaaggtgaaagcaacatctcacatggtggcaggtaaagaggaaatgagagagccaagcaaaaggggaaactccttataaaatcatcagatcttgtgagacttattcacgaccacaagaacagtatgggagaaactgcctccatgattcagttatctcccaccggctcccacagcacatgggaattatgggagctacaattgaagatgagatttggatgaggacacagccaa-ccatatcacctcccacgttctttcttggatgcaagaatgcagaatgaatctctacaca i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e nomLeu3.chr10 102880374 1060 - 106955855 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15490 + 63644993 T a score=131616.000000 s hg38.chr19_GL949747v2_alt 309065 519 + 729520 ccattttggtattttcaCCATCTCGGAAGACataacagtgtattatatccttaaaaatcactataaaagtagattttaagggttcttaccacacaaaaattagaaatatggaaagtaatgtatatgttaattagattgatttgcccaacagacaag--tatatatatttcaaaactacatactttacacaataagtatatacaatttAGGAAtttttcttttttctttttttttttgatggagtctcactctgtcaccaagctggagtgcactggtgcgatctcggctcactgcaatctccgcctcctgggttcaagcgattcccctgcctcagcctcccgagtagctgggactacaggcgtgcaccaccacgcccggctaattttttgtattttagtagagatggggtttcaccatgttggccaggatggtctcgatctcctgaccttgtgatccAAAGCTGTGTTATGAACATGAAGTTCTAAACACATTTTCTCATATGTTCACACATGTCTCATTCC s ponAbe2.chr19 56118718 513 + 60714840 ccattttggtattttcaCCACCTCGGAAAACataacaatgtattatatccttaaaaatcgttataaaagtagattttaagggttcttaccacacaaaaattagaagtatgtaaagtaatgtatatgttaattagattgatttgcccaacagacaag--tatatatatttcaaaactacatactttacacaataagtatatacaatttAGGAAtttttctttttt----ttttttttgatggagtctcactctgtcgccaagctggagtgcactggtgcgatcttggctcactgcaatctcttcctcccgggttcaagcgattcccctgccttagcctcccaagtagctgggactacaggcacgcaccaccacgcctggctaattttttgtattttagtagagatggggtttcaccatgttggccaggatggtctcgatctcctgaccttgtgatccAAAGCTGTGTTGCGAACATGAAGTTCTAAACACATTTTCTTGTATGTTCACACAT--CTCATTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102881434 513 - 106955855 cCATTTTGGTATTTTCACCATCTCGGAGGACataacagtgtattatatccttaaaaatcactataaaagtagattttaagggttcttaccacacaaaaattggaagtatgtaaagtaatgtatatgttaattagattgatttgcccaacagacaagtatatatatatttcaaaactacatacttcacacaataagtataaataatttAGGAAtttttctt--------ttttttttgatggagtctcactctgtcaccaagctggaatgcactggtgcaatctcggctcactgcagtctccgcctcccaggttcaagcgattcccctgcctcagcctcctgagtagctgggactacaggcgcccatcaccacgcccggctaattttttgtattttagtagagacggggtttcaccatgttggccaggatggtctcgatctcctgaccttgcgatccgAAGCTGTGTTGTGAACATGAAGTTCTAAACACATTTTCTCATATGTTCACACATGTCTCATTCC i nomLeu3.chr10 I 1060 C 0 e canFam3.chr1 19731686 720 - 122678785 I e calJac3.chr22 45524842 38011 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15490 + 63644993 T a score=11613.000000 s hg38.chr19_GL949747v2_alt 309584 35 + 729520 AGCCTCAGTGCTC--ATGGGGTAGGATC----TCCTTACCT s ponAbe2.chr19 56119231 35 + 60714840 AGCCTCAATGCTC--ATGGGGTAGGATC----TCCTTACCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102881947 35 - 106955855 AGCCTCAGTGCCC--ACGGGGTAGGATC----TTCTTACCT i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45562853 41 + 49145316 AGCCTTTGAGCTCAGAGAGGACAGGATCAGGGCCCTCACCT i calJac3.chr22 I 38011 C 0 e canFam3.chr1 19731686 720 - 122678785 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15490 + 63644993 T a score=217286.000000 s hg38.chr19_GL949747v2_alt 309619 437 + 729520 GAGACCACAAAC-CCTGGGGGTCCCTGGGGTGTGAAAACAGGTAGGGGGAGGTACTCTATAAGACATAGCACCTGTAGGTCCTCCCA---------------GCATTCATGG------AGAATTCAGCC-TGTACTGCTGAGCTTGGTACTTTGATATTAGACACAAAGGTA--GGGATCTGCTG-CTCCCTTCTTGGAAATAAGAAAAGT--------------GTCACTGATGTAGCAGGACCATGTTCTTTCCTGAGGCCACCATGGAGCCCGGCTGCACCAACAGGGAATATCCCTCAGGCACCTGTCCTAGAGAGAGGCAGGATGGGTGAGGGGCTGCCCCCACCTTGTTCTGAGCAGAGACCTTCCCAGGGCTTCTCTCTAGGACCCTCAGTCTCTCTGTCATTCACTGTTTCCTCTGAGTctcttcctctccctcccatccaccttgcccctctgtctctttccctctcT s ponAbe2.chr19 56119266 436 + 60714840 GAGACCACAAAC-CCTGGGAGTCCCTGGGGTGTGAAAACAGGTAGGGGGAGGTGCTCCATAAGACATAGCACCTGTAGGTCCTCCCA---------------GAATTCATGG------AGAATTCCACC-TGTACTGCTGAGCTTGGTACTTTGATATTAGACACAAAGGTA--GGGATCTGCTG-CTCCCTTCTTGGAAATAAGAAAAGT--------------GTCACTGATGTAGCAGGACCGTGTTCTTTCCTGAGGCCACCATGGAGCCCGGCTGTACCAACAGGGAATATCCCTCAGGCAGCTGTCCTAGAGAGAGGCAGGATGGGTGAGGGGCTGCCCCCACCTTGTTCTCAGCAGAGACCTTTCCAGGGCCTCTCTCTAGGACCCTCAGTCTCTCTGTCATTCACGGTTTCCTCTGAGTctcttcctctccctcccatcccccttgcccc-ctgcctctttccctctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102881982 439 - 106955855 GAGACCACAAAC-CCTGGGGGTCCCTGGGGTGTGAAAACAGGTAGGGGGAGGTGTTCCATAAGACATAGCACCTGTAGGTCCTCCCA---------------GAATTCATGG------AGAATTCCACC-TGTACTGCTGAGCTTGGCACTTTGATATTAGACACAAAGGTAGGGGGATCTGCTG-CTCCCTTCTCGGAAATAAGAAAAGT--------------GTCACTGATGTAGCAAGACCATGTTCTTTCCTGAGGCCACCATGGAGCCCGGCTGCACCAACAGGGAATATCCCTCAGGCAGCTGTCCTAGAGAGAGGCAGGATGGGTGAGGGGCTGCCCCCACCTTGTTCTGAGCAGAGACCTTCCCAGGGCCTCTCTGTAGGACCCTCAGTGTCTCTGTCATTCACTGTTTCCTCTGAGTctcttcctctccctcccatcccccttgcccctctgcctctttccctctcT i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45562894 441 + 49145316 GAGACCACAAGCTCCAGGGGGTCACTGGGGTGAGACAGCAGGTAGGGGCTGGAGCTGTATGAGCCATAGCACCTGTAGGTCCCTGCATGGG---------CTGAGGTTACAGGAATTTGGAATTCAGCCAAGTACTGTTGAGCTCTGTAAGTGAATCTTAGACGCAGCAG----GGGATGGGCTA-CCCCCTCTTTGGTCAGAAGGAAACTGAACATTGGGCTCCGTGACTGACACAGCAGGGTCACATTCTCTCCTGAGGCCACTGTGGGGCCCAGCTGCACTGAGAGGGAGGGTCTCTCAGGGATCTGTCCTGGAGAGAAGAAGGAT-GGTGAGGGGATG-CCCCACCTTGTTCTGAGCTGAGACCTCCCCA-GGCCTCTCTCTGGGACCCTCAGTCTCT------------GTCTTCT----GTCTCCCCCTC-CCCGCCCATCCCC--TGTCTCTGTCTCTCCCTCCCTCCCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102761694 392 + 122678785 GGGACCAGGAACTTCACAGGGACACTGGGCTATGACAACAGGTACAGGGAGGTGTTGAGTGAGCCATAGCACCTGTAGGTCCCCCCATGGGATGAGGTCACAGGACTCAAGG------AGAATTCAGCC--ATACAGCCCAGCTCGGTACTTTGATCTAAGATGCAGAGG----GGGATCAGCTGCCCCCCTCCTTGGACAGTAGGAAAGTGTCCACAGAG----CTCAGTGACAAA--AGGGTCACATTCTCTCCTGGGGCCACCATAGGTCCTGGCTGCACCCAGAGGGAGGGTGTGTAGGGGAGCTGTCCTAGAGAGAGGAAGGGC-------------------CCTTGTTCTGATCTGAG----------------------------TCTGTCT--------------GTGTCCTCTGAGTCTTTCC----CATCCCCATCCCC--TGtctctctctctctctctgtctct i canFam3.chr1 T 11772 I 147 e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15490 + 63644993 T a score=2721.000000 s hg38.chr19_GL949747v2_alt 310056 9 + 729520 AAAGAACCT s ponAbe2.chr19 56119702 9 + 60714840 AAAGAACCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102882421 9 - 106955855 AAAGAACCT i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45563335 9 + 49145316 TGGGACCCC i calJac3.chr22 C 0 C 0 e canFam3.chr1 102762086 147 + 122678785 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15490 + 63644993 T a score=93190.000000 s hg38.chr19_GL949747v2_alt 310065 364 + 729520 TATCCATtgacgtggtttgattgtgtccccacccaaatctcatcttgaattgtagctcccataattcccacgtgttgtgggaggaacctggtgggagataattgaatcgtggag-gcggtgggtggtttcccccatactgttctcctggtagtaagtctcacgagatctgatggttttataaggggaaacccctttcacttggctctcatttc-tttcttgtctgccacc-------atgtgcctttcaccttccaccatgcttatgaggtctccccagccacatggaactgtgagtccattaaacctctttttctttataaatcacccagtcttggggatgtctttatcagcagcaagaaaacagactaata s ponAbe2.chr19 56119711 370 + 60714840 TATCCATtgacatggtttggctgtgtccccacccaaatctcatcttgaattgtagctcccataattcccacatgttgtgggaggaacctggtgggagataattgaatcatggagaggggtgggtggtttcccccatactgttctcctggtagtaagtctcacgagatctgatggttttataaggggaaacctctttcacttggctctcatttc---tcttgtctgccaccatgtaagatgtgccttttgccttccgccatgattgtgaggcctccccagccacatggaactgtgagtccattaaacctctttttctttataaatcacccagccttggggatgtctttatcagcagcatgaaaacagactacta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102882430 373 - 106955855 TATCCATtgacatggtttggctgtgtccccacccaaatctcatcttgaattgtagctcccataattcccacatgttttgggaggaacctggtgggagataattgaatcatggaggggggtgggtggtttcccccatcctgttctcctggtagtaagtctcatgagatctgatggttttaaaaggggaaacccctttcacttggctctcattttccctctcgtctgccaccatgtaagatgtgccttttgccttccaccatgattgcgaggcctccccagccacgtggaactgtgagtccattaaacctctttttctttataaatcacccagccttggggatgtctttatcagcagcatgaaaacagactaata i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102762086 147 + 122678785 I e calJac3.chr22 45563344 0 + 49145316 C e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15490 + 63644993 T a score=64020.000000 s hg38.chr19_GL949747v2_alt 310429 149 + 729520 caCTCATCATGCTGGTCATCACCGCCTGCAGATCCCCAGCAGGCCCTGTGCAGAATCTGGGTCCCTGAGTGAACCTGCTGGACCCCTCACCTGCAAT-AGCATATCCAGGGGATT-CAGGGGACCAAACAATCAGAAAAGACATTGTGggc s ponAbe2.chr19 56120081 149 + 60714840 taCTCATCATGCTGGTCATCACCACCTGCAGATCCCCAGCAGGCCCTGTGTAGAATCTGGGTCCCTGAGTGAACCTGCTGGACCCCTCACCTGCAAT-AGCATATCCAGGGGATC-CAGGGGACCAAACAATCAGAAAAGACATTGTGggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102882803 150 - 106955855 caCTCATCATGCTGGTCATCACCACCTGCAGATCCCCAGCAGGCCCTGTGCAGAATCTGGGTCCCTGAGTGAGCCTGCTGGACCCCTCACCTGCAGTCAGCATATCCAGGGGATC-CAGGGGACCAAACAGTCAGAAAAGACATTGTGggc i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45563344 151 + 49145316 CACCCCTCATCCCAGCCATCACCATCTGGGCTCCCCCAGCAGGGCCTGTACAGAGCCTGGGTCCCTGACTGAACCTGCTGGGCTCCTCACCTGAGATCAGGACGTCCAGGGGGTCACTGGGGGCTGACCACTCGGAGGAGACGTTGTGGGC i calJac3.chr22 C 0 C 0 e canFam3.chr1 102762086 147 + 122678785 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15490 + 63644993 T a score=74028.000000 s hg38.chr19_GL949747v2_alt 310578 328 + 729520 tcggtgcggtgactcacgcctgtaatcccagcactttgggaggccgaggtgggtggatcacctgaggtcaagagttcaacaccaggctggccaacatggcaaaacccagtctctactaaaaatac-aaaaaaaaaaaaaaaaatttagccaggcatggtagtgtatgcctgtaatcccaggtacttgagaggctgaggcaggagaattacttgaacccaggaggtgaaggttgcagtgagctgagatcgtaccacgcactccagcctgggcaacaagagcgaaactccatctcaaaaaaacaaaaacaaaacaaaacaa---gaaaAGAAAA s ponAbe2.chr19 56120230 324 + 60714840 tgggcgcagtgactcatgcctgtaatcccagcactttgggaggccgagg-gggtggatcacctgaggtcaggagttcaagaccaggctggctaacatggcaaaacccagtctctactaaaaatactaaaaaaaaaaaaaaaaaattagccaggcatggtagtgtatgcctgtaatcccaggtacttgggaggctgaggcaggagaattacttgaatccgggaggtggaggttgcagtgagctgagat-------cacactccagcctgggcaacaagagcgaaactccatctcaaaaaaaaaaaaaaaaaaagaaagaaaagaaaaagaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102882953 323 - 106955855 cgggcgcggtggctcacgcctgtaatcgcagcactttggaaggctgaggtgggtggatcacttgaggtcaggagttcaagaccaggctggccaacatggtgaaacccagtctctactaaaaatac-aaaaaaaaaaaaaaaa------ttaggcatggtagtgtacgcctgtaatcccaggtacttgggaggctgaggcaggagaattacttgagcccgggaggtggaggttgcagtgagctgagatcgcgccatgcactccagcctgggcaacaagagcgaaactctgtctcaaaaaaaaaaaaaagaaagaaaaagga--aaagaaaaaa i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102762086 147 + 122678785 I e calJac3.chr22 45563495 0 + 49145316 C e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15490 + 63644993 T a score=6484.000000 s hg38.chr19_GL949747v2_alt 310906 17 + 729520 GAAAAGACGTTGCGTTT s ponAbe2.chr19 56120554 17 + 60714840 aaaaaGACGTTGCGTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102883276 17 - 106955855 gaaaagaTGTTGCGTTT i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 102762233 17 + 122678785 GAGGAGAGGTTGTGTCC i canFam3.chr1 I 147 C 0 e calJac3.chr22 45563495 0 + 49145316 C e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15490 + 63644993 T a score=130492.000000 s hg38.chr19_GL949747v2_alt 310923 268 + 729520 AGCACAGCATCTGTCCTGGCTCCCATGGGAGCCACTC--------CAAGGAAACGTCAGCCTGACGGAGCCCAGCCTGGGGCTGCCAGCCATGGTGCCAGGGT-GGTCATGTCGCCTCTCCTCAGACAGGAAAAGTCCTTGGTGGCCAACATCAGAGCAACACTGGAAGGTCAGACTCTCTCCAGAGATTAGGAGGGGCCCCTGTTTGGTCCCG-TGCAGGGAGTCCTAGACACACCTAGAGGGAAAGACAAGTCA-GGACTTTGGGGGCTGACTCCCC s ponAbe2.chr19 56120571 268 + 60714840 AGCACAGCATTTGTCCTGGCTCCCATAGGAGCCACTC--------CAAGGAAACGTCAGCCTGACAGAGCCCAGCCTGGGGCTGCCAGCCATGGTGCTGGGGT-GGTCATGTCCCCTCTCCGCAGACAGGAAAAGTCTCTGGTAGCCAACATCAGAGCAACACTGGAAGGTCAGACTCTCTCCAGAGATTAGGAGGGGCCCCTGTTTGGTCCCG-TGCAGGGAGTCCTAGACACACCTAGAGGGAAAAACAAGTCA-GGACTTTGGGGGCTGGTTCCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102883293 256 - 106955855 AGCACGGCATCTGTCCTGGCTCCCATGGGAGCCACTC--------CAGGGAAACGTCAGCCTGACAGAACCCAGCTTGGGGCTGCCAGCCATGGTGCTGGGGT-GGTCATGTCCCCTCTCCACGGACAGGAAAAGTCCCTGGTAGCCAATATCAGAGCAACCCTGGAAGGTCAGACTCTCTCCAGAGATTAGGAGGGGCCCCTGTT-------------GGGAGTCCTAGATGCACCTAGAGGGAAAGACATGTCA-GGACTTTGGGGGCTGGTTCCCC i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45563495 278 + 49145316 ACCGTAGCATCTGTACTGGCCCTCGTGGGAGACCCTCACAGGGCTCAGGGTGAAGTTGGCCTGAGAGAGCCCAGCCTGGGACTGCTCTCTAGGGCGCTGGGGGAGGACATCACCCCCCTCCTTGTACAGAGCATAGCTGACGTACCCGACATCAGAGCCACATTGGAGGGTCAGGTTCTCTCCGGGGGCCACAATGGGGCTCTGCAGGGTCAAGAGGGAGGGTTTCCTAGACACACCTGGAGGGAAAGAGGAGCCA-GGACTCAGATGGCCGATTGCCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 102762250 276 + 122678785 ACCTTAGCATGTGTACCGGCCCCCATGGAAGGATCTCACTGGGCCCAGAGGGACATCTGCCCCAGATATCCCAGCCTGAAGCTGCCGGCCATGATGCTGAAGAAGGTCACGTGCCCT-TCCTTGGATAGAGCAAATCTGTCATACTGGACATCAGAAAGACACTGGAGGGTCAATCTCTGTCCAGAGGTCACAAAAGGGCCCTCCTGGGTCAGGAGCAAGGGCTTCCATGACACACT--GGGGAGAAGATCAGCCATGGGTTGTAGGGGCTGATTCTTC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15490 + 63644993 T a score=380098.000000 s hg38.chr19_GL949747v2_alt 311191 245 + 729520 TCAAATACATCCCTT---------GTCCTC--C---TGGCTCTGCAGATCTCACCATCACTTATACTCTGTGTCTCT--GGCCCCAGAAGCCCTCGT--TCCCCTCATTCCACCCTCACGCTTGGGACTTGCCTGGGAGC-AAGATCCACAGCAACCTGTCTGATGCTTCAAAGAATGTTTGGGGTAAAGATGGGACTTCCTCACCTGAGAACAGGAGCTTCAGGGAGTTGCTGAGGTCC--------------------------------------------------------------------GACCACACCTGAAGGGTGTTCTGA s ponAbe2.chr19 56120839 315 + 60714840 TCAAATACAACCCTT---------GCCCTCCTC---TGGCTCTGCAGATCTCACTGTCACTTACACTCTATGTCTCT--GGCCCCAGAAGCCCTCGT--TCCCCTCATTCCACCCTCACACTTGGGATTTGCCTGGGAGC-AAGATCCACAGCAACCTGTCTGATGCTTCAAATAATGTTTGGGGTAAAGATGGGACTTCCTCACCTAAGAACAGGAGCTTCAGGGAGTCGCTGAGGTCCGACCACACCTGAAGGGTGTTGCGACTTCCTCACCTGAGAACAGGAGCTTCAGGGAGTCGCTGAGTTCTGACCACACCTGAAGGGTGTTCCGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102883549 188 - 106955855 TCAAATACATCCCTT---------GCCCTCCTC---TGGCTCTGCAGATCTCACTGTCACTTATACTCTATGTCTCT--GGCCCCAGAAGCCCTCGT--TCCCCTCATTCCACCCTCACACTTGGGGCTTGCCTGGGAGC-AAGATCCACAGCAACCTGTCTGATGCTTCAAAGAATGTTTGGGGTAAAGATGGGACCTCCTCAC------------------------------------------------------------------------------------------------------------------------------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60143088 247 + 64156825 TCAAATACATCCCTT---------GTCCTCCTC---TGGCTCTGCAGATCTCACCGTCACTTACACTCTACGTCTCT--GGCCCCAGAAGCCCTTGT--TCCCCTCATTCCACCCTCACACTTGGGGCTTGCCTGGGAGT-GAGATGCACAGCAACCTGTCTGATGCCTCAAAGAACGTTTGGGGTTAAGACGGGACTTCCTCACCTAAGAACAGGAGCCTCAGGGAGTCCCTGGGTTCT--------------------------------------------------------------------GACCACACCTGAAGGGTGTTCCGA i rheMac3.chr19 I 5568 C 0 s macFas5.chr19 55230597 247 + 59248254 TCAAATACATCCCTT---------GTCCTCCTC---TGGCTCTGCAGATCTCACCGTCACTTACACTCTACGTCTCT--GGCCCCAGAAGCCCTTGT--TCCCCTCATTCCACCCTCACACTTGGGGCTTGCCTGGGAGT-GAGATGCACAGCAACCTGTCTGATGCCTCAAAGAACGTTTGGGGTTAAGACAGGACTTCCTCACCTAAGAACAGGAGCCTCAGGGAGTCCCTGGGTTCT--------------------------------------------------------------------GATCACACCTGAAGGGTGTTCCGA i macFas5.chr19 I 629 C 0 s papAnu2.chr19 47337585 247 + 51301725 TCAAATACATCCCTT---------GTCCTCCTC---TGGCTCTGCAGATCTCACCGTCACTTACACTCTATGTCTCT--GGCCCCAGAAGCCCTTGT--TCCCCTCATTCCACCCTCACACTTGGGGCTTGCCTGGGAGT-GAGATCCACAGCAACCTGTCTGATGCCTCAAAGAACGTTTGGGGTTAAGACGGGACTTCCTCACCTAAGAACAGGAGCCCCAGGGAGTCCCTGGGTTCT--------------------------------------------------------------------GATCACACCTGAAGGGTGTTCCAA i papAnu2.chr19 I 630 C 0 s chlSab2.chr6 47034669 247 + 50890351 TCAAATACATCCCTT---------GTCCTCCTC---TGGCTCTGCAGATCTCACCGTCACTTACACTCTACGTCTCT--GGCCCCAGAAGCCCTTGT--TCCCCTCCTTCCACCCTCAGAGTTGGGGCTTGCCTGGGTGT-GAGATCCACAGCAACCTGTCTGATGCCTCAAAGAACGTTTGGGGTTAAGACGGGACTTCCTCACCTAAGAACAGGAGCCCCAGGGAGTCCCTGGGTTCT--------------------------------------------------------------------GATCACACCTGAAGGGTGTTCCGA i chlSab2.chr6 T 19868 C 0 s calJac3.chr22 45563773 185 + 49145316 ----CTATGCCCCTTCCTTCCGTAGTCTTCCTCACTAGGGTCTCCAGTGTCCTCGTTTTTCCTCACTCTATATCTGT--GTCCCCAGGGGCCCGTTT--TTCCCTTATCTTTTCTTCTCTAGTGGGTCTAGCCTGAGGGC-AAGGCTGCCAACAGCTCCCCTGTACCCT--GACGTTGTATAAGGAAAGGCTGTGG---------------------------------------------------------------------------------------------------------------------------------------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 102762526 177 + 122678785 CCAA--ACTTCCATT---------TGCCTGTCC---TGACCC--CAGGTCTCACTCTCTCTCACTCTCTCTGACCCTGGGGACCTGTGAGTCCTGGTGGTCCCCTCTCCCAACCCTCTCATCTGATGATCCCCTAGGAGCAGAGATCCCT--TTACCTGTCTTTTGCTTCAAACTATGGATGGTAAAAAATCAGA----------------------------------------------------------------------------------------------------------------------------------------- i canFam3.chr1 C 0 C 0 e panTro4.chr19 59264813 15490 + 63644993 T a score=450041.000000 s hg38.chr19_GL949747v2_alt 311436 158 + 729520 CTTCCTCACCTGAGAACAGGAGCTTCAGGGAGTCGCTGAGTTCCGACCACACCTGAAGGGTGTTCCTGTTATTGCCATGACATCTGAACATCCATCTGTGGCTGAGGGTCTTGGGGCCCACAGGAAACAGAGCTTGGGACTGTCCACTAGGGTGTTGC- s panTro4.chr19 59249323 158 + 63644993 CTTCCTCACCTGAGACCGGAATCTCCAGGAGGTCACTGGGTTCTGACCATACCTGCAGGATATGCCTGCGAGAGCCATAGCATCTGAGCATCCACCTGTGGCTGGGGGTCACAGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTGGGGGTCAGC- i panTro4.chr19 T 15490 T 99399 s ponAbe2.chr19 56121154 156 + 60714840 CTTCCTCACCTGAGAACAGGAGCTTCAGGGAGTCGCTGAGTTCCGACCACACCTGAAGGGTGTTCCTGTTATTGCCATGACATCTGAACATCCACCTGTGGCTGAGGGTCATGGGGCCCACAGGGAACA--GCTTGGGACTCTCCACTAGGGTGTTGC- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102883737 147 - 106955855 ---------CTGAGAACAGGAGCTTCAGGGAGTCACTGGGTTCCGACCACACCTGAAGGGTGTTCCTGTTGTTGCCATGACATCTGAACATCCACCTGTGGCTGAGGGTCATGGGGCCCACAGGAAACA--GCTTGGGACTGTCCACTAGGGTGTTGC- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60143335 158 + 64156825 CTCCCTCACCTGAGAACAGGAGCCCCAGGGAGTCGCCGGGGTCTGACCGCACCTGAAGGGTGTTCCTGTTACTGCCATAGCATCTGAACACCCACCTGCGGCTGAGGGTCATGGGGCCCACAGGGAACAGGGCTTGGGACTGTCCACTAGGGTGTTGC- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55230844 157 + 59248254 CTTCCTCACCTGAGAACAGGAGCCCCAGGGAGTTGCTGGGGTCCGACTGCACCTGAAGGGTGTTCCTG-TACTGCCATAGCATCTGAACACCCACCTGCGGCTGAGGGTCATGGGGCCCACAGGGAACAGGGCTTGGGACTGTCCACTAGGGTGTTGC- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47337832 158 + 51301725 CTTCCTCACCTGAGAACAGGAGCCCCAGGGAGTTGCCGGGGTCTGACCGCACCTGAAGGGTGTTCCTGTTACTGCCATAGCATCCGAACACCCACCTGTGGCTGAGGGTCATGGGGCCCACAGGGAACAGGGCTTGGGACTGTCTACTAGGGTGTTGC- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47034916 158 + 50890351 CTTCCTCACCTGAGAACAGGAGCCTCAGGGAGTCGCTGGGGTCCGACCGCACCTGAAGGGTGTTCCTGTTCTTGCCATAGCATCTGAACACCCACCTGTGGCTGAGGGTCATGGGGCCCACAGGGAACAGGGCTTGGGACTGTCCATTAGGGTGTTGC- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45563958 158 + 49145316 CGTGCTCACCTGACACCAGGAGCTGCAGGGGGTCACTGGGTTCTGACCACACGTAGGGGGTATTGTTTCGATAGCCGTAGCATCTGAATGTACCCCTGTGGCTGAAGATCAGGGGGCCCATGGGGAACAGGGCCTGGAACTTTCCATGGTTGTGTTGG- i calJac3.chr22 C 0 C 0 s canFam3.chr1 102762703 159 + 122678785 CTTTCTCACCTGAGACAAGCAGCTCCAGGGGGCCACTGGAGACTGACCACACGTGGGGTGTGTGGCTGTAATAACCATAGCATCTGAACTTCCAGGTGAGGCTGGGGGCTACCTGAACCACAGGTAATAGGGCCTGGACCCCCCCCAATGGGGGCTCCC i canFam3.chr1 C 0 C 0 a score=275418.000000 s hg38.chr19_GL949747v2_alt 311594 118 + 729520 TGAGAGTCTAGGGTGCAGGAGAGACTGAGTTCTCCTTCCTCGGTCAGAATGAATCTGTCCAGTTGCAGCCATGAGCCACGCTGGAGAGTC-----CTCTCCTAAAGTTGCAACAGGCTCAGGG-- s ponAbe2.chr19 56121310 116 + 60714840 TGAGAGTCTAGGGTGCAGGAGAGAC--AGTTCTCCTTCTTCAGTCAGAATGAATCTGTCCAATTGCAGCCGTGAGCCACACTGGAGGGTC-----CTCTCCTAAAGTCACAACAGGCTCAGGG-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102883884 118 - 106955855 TGAGAGTCTAGGGTGCAGGAGAGACTGAGTTCTCCTTCCTCAGCCAGAATGAATCTGTCCAATTGCAGCCATGTGCCACACTGGAGGGTC-----CTCTCCTGAAGTCGCAACAGGCTCAGCG-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60143493 117 + 64156825 TGAGAGTCTAGGGTGCAGGGGAGGCTGAGTTCTCCTTCCTCAGTCAGAATGAATCTGTCCAGTTGCAGCCGTGAGCCACACTGGAGGGTC-----CTCTCTTAAAGTCACAACAGGCTC-GGG-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231001 117 + 59248254 TGAGAGTCTAGGGTGCAGGGGAGGCTGAGTTCTCCTTCCTCAGTCAGAATGAATCTGTCCAGTTGCAGCCGTGAGCCACACTGGAGGGTC-----CTCTCTTAAAGTCACAACAGGCTC-GGG-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47337990 118 + 51301725 TGAGAGTCTAGGGTGCAGGAGAGACtgagttctccttcctcagtcagAATGAATCTGTCCAGTTGCAGCCGTGAGCCACACTGGAGGGTC-----CTCTCTTAAAGTCACAACAGGCTCAGGG-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47035074 116 + 50890351 TGAGAGTCTAGGGTGCAGGGGAGACTGAGTTCTCCTTCCTCAGTCAGAATGAATCTGTCCAGTTGCAGCCGTGAGCCACACTGGAGGGTC-----CTCTCTTAAACTCACAACAGGCTC--AG-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45564116 123 + 49145316 TGTGAGTCCAGGGTCCAGGAGAGCCTGTGGATTCCTTCCTCAATCAGAGTGAACCTGTCCAGTCCCAGCCGAGAGGCACATCGGAGGGTCACGTTCACTCCTGAGGTCACCACGGGGCTTGGC-- i calJac3.chr22 C 0 I 1 s canFam3.chr1 102762862 123 + 122678785 TGGGAGTCTAGGGTCCAGGAGGGCTGGCCTTCTACTTCCTTTATCAGGATGAACCTGTGGAATCCTGTCCATTA-CCACACTGGAGAGTCATGTCCCCTCCTGAGGGCACGACAGGGCT-GGGCA i canFam3.chr1 C 0 C 0 e panTro4.chr19 59249481 99399 + 63644993 T a score=648067.000000 s hg38.chr19_GL949747v2_alt 311712 203 + 729520 GGGCTGAGAAGGTAGATTTTCTGTAGAATCCTAGGAGAGAAGGAGGTAGTG----TGATCCTTGAGGCTCAAGCCTC-CC------ACCTTATCCCTTAGGGCTGGGCTGTGAGGGAGAGACACCCCTGAGAGCAGACCCCTTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCAAGGTGTCCTCCCACCTATCACCACCAGCTCCAGGGAGTC s panTro4.chr19 59150082 202 + 63644993 GGGCTGAGAGGGTGGGTGTGCTGTAGAATCCTAGGAGAGAAGGAGGCACCG----TGTTAAATGGGGCTCCCACCTC-CC------ACATCATCCCC-AGGGCTGGGCTGTGAGAGGGAGACACCCCTGAGAGCCGACCCCCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCAGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTC i panTro4.chr19 T 99399 N 0 s ponAbe2.chr19 56121426 203 + 60714840 GGGCTGAGAAGGTAGATTTGCTGTAGAATCCTAGGAGAGAAGGAGGCAGTG----TGATCACTGAGGCTCAAACCTC-CC------ACCTTATCCCTTAGGGCTGGGCTGTGAGGGAGAGACACCTCTGAGAGCAGACCCCTTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCAAGGTGTCCTCCCACCTGTCACCACCAGCTCCAGGGAGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884002 203 - 106955855 GGGCTGAGAAGGTAGATTTTCTGTAGAATCCTAGGAGAGAAAGAGGCAGTG----TGATCATTGAGGCTCAAGCCTC-CC------ACCTTATCCCTTAGGGCTGGGCTGTGAGGGAGAGACACCCCTGAAAGCAGACCCCTTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCAAGGTGTCCTCCTACCTGTCACCACTGACTCCAGGGAGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60143610 203 + 64156825 GGGCTGAGAAGGTAGATTGGCTGTAGAATCCTAGGAGAGAAGGAGGCAGTG----TGATCTCTGAGGCTCAAGCCTC-CC------ACCTTATCCCTTAGGGCTGGGCTGTGAGAGAGAGACGCCCCTGAGAGCAGACCCCTTTCCTGAGGGCAGAGCCTGGGGCCGGGACCCCAAGGTGTCCTCCCACCTGTCACCACCAGCTCCAGGGGGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231118 203 + 59248254 GGGCTGAGAAGGTAGATTGGCTGTAGAATCCTAGGAGAGAAGGAGGCAGTG----TGATCTCTGAGGCTCAAGCCTC-CC------ACCTTATCCCTTAGGGCTGGGCTGTGAGAGAGAGACGCCCCTGAGAGCAGACCCCTTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCAAGGTGTCCTCCCACCTGTCACCACCAGCTCCAGGGGGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338108 203 + 51301725 GGGCTGAGAAGGTAGATTGGCTGTAGAATCCTAGGAGAGAAGGAGGCCGTG----TCATCTCTGAGGCTCAAGCCTC-CC------ACCTTATCCCTTAGGGCTGGGCTGTGAGGGAGAGACACCCCTGAGAGCAGACCCCTTTCCTGAGGGCAGAGCCTGCGGCTGGGACCCCAAGGTGTCCTCCCACCTGTCACCACCAGCTCCAGGGGGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47035190 203 + 50890351 GGGCTGAGAAGGTAGATTGGCTGTAGAATCCTAGGAGAGAAGGAGGTGGTG----TGATCTCTGAGGCTCAAGCCTC-CC------ACCTTATCCCTTAGGGCTGGGCTGTGAGGGAGGGACACCCCTGAGAGCAGACGCCTTTCCTGAGGGCAGAGCCTTGGGCTGGGACCCCAAGGTGTCCTCGCACCTGTCACCACCAGCTCCAGGGGGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45564240 197 + 49145316 GGGCTGAAAGGGTGGGTCTGCTGTAG---CCTTTAGGAGAAAAAAACAGCAGCCTTGTTAAATGGGGCTCACACCTC-CCCATTTAACCCTCTCCCTCAGGGCTGGGCTGTGAGAGGG-------------AGCTGACCCCCTTCCCGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTC i calJac3.chr22 I 1 C 0 s canFam3.chr1 102762985 198 + 122678785 GGGCTGAGAGGCTGGGTTTGCCATGCAATCCTAGATGAGGGGGAGGGGCTG----TGTTAAATGGGATTCAGATTGCTCC------ACATGATCCCC-AGAACTGGGCTGTGAGGGAGACA---CCCGGGAACCAGACCCTCTTCCTGAGGGCAGAGCCTGGGGCTGGG--CCCTGTGTGGGCTCGCACCTGTCACCACCAGCTCCAGGGGGTC i canFam3.chr1 C 0 C 0 a score=283946.000000 s hg38.chr19_GL949747v2_alt 311915 120 + 729520 AGTGAGCTC-----------TGGGGCTGAAATAGTGACAGTAATATCATCCTACATATTCATTTGTCATGGATATGATGGGGGAACTCGGCCTTGTCTCCAGGCTGCAGTGGGCTCTGTCTGTCCCAGGAC s ponAbe2.chr19 56121629 131 + 60714840 AGTGAGCTCTGACAAGCCATTGGGGCTGAAATAGTGACAGTAATGTCATCCTACATATTCATTTGTCATGGATGTGATGGGGGAACTCAGCCTTGTCTCCAGGCTGCAGTGGGCTCTGTCTGTCCCAGGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884205 131 - 106955855 AGTGCGCTCTGACAAGCCATTGGGGCTGAAATTGTGACAGTAATGTCATCCTACATATTCATTTGTCATGGATATGGTGGGGGAACTCGGCCTTGTCTCCAGGCTGCAGTGGGCTCTGTTGGTCCCAGGAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60143813 130 + 64156825 AGTGAGCTCTGACAAGTCACTGGGGCTGAAATAGTGACAGTAATGTCATCCTACATATTCATTTGTTATGGACGTGATAGGAGAACTCAGCC-TGTCTCCAGGCTGCACTGGGCTCTGTCTGTCCCAGGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231321 130 + 59248254 AGTGAGCTCTGACAAGTCACTGGGGCTGAAATAGTGACAGTAATGTCATCCTACATATTCATTTGTTATGGACGTGATAGGAGAACTCAGCC-TGTCTCCAGGCTGCACTGGGCTCTGTCTGTCCCAGGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338311 130 + 51301725 AGTGAGCTCTGACAAGTCACTGGGGCTGAAATAGTGACAGTAATGTCATCCTACATATTCATTTGTTATGGACGTGATAGGAGAACTCAGCC-TGTCTCCAGGCTGCACTGGGCTCTGTCTGTCCCAGGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47035393 130 + 50890351 AGTGAGCTCTGACAAGTCACTGGGGCTGAAATAGTGACAGTAATGTCATCCTACATATTCATTTGTTATGGATGTGTTAGGAGAACTCAGCC-TGTCTCCAGGCTGCACTGGGCTCTGTCTGTCCCAGGGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45564437 130 + 49145316 GCTGGGCTCCGACCAGCCTGCAGGGCTCTGGTAGTAACAGTGATATCGCCCTGCGTGTTTCCACTGCATGGCTGGGAT-GGAGAATTTGACCTTGTTTTCAGAATCCAGTGTTTTTAATATAGTCCTTGAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 102763183 130 + 122678785 ACTGGGCTCTGACCAGTCAGTGGTGCTTTCATAGTAACAGTGATACCGTCCTGCATATACACCTGTAATGTGTGTGAT-GGAGAACTTGTCCTTGTCCTTGGACTCCAGTGCCTTCTGTCTGTCCCAGGTT i canFam3.chr1 C 0 C 0 a score=10587.000000 s hg38.chr19_GL949747v2_alt 312035 5 + 729520 ACTGA s ponAbe2.chr19 56121760 5 + 60714840 ACTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884336 5 - 106955855 ACTGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60143943 5 + 64156825 ACTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231451 5 + 59248254 ACTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338441 5 + 51301725 ACTGg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47035523 5 + 50890351 ACTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45564567 5 + 49145316 ATTGA i calJac3.chr22 C 0 C 0 e canFam3.chr1 102763313 0 + 122678785 C a score=8022.000000 s hg38.chr19_GL949747v2_alt 312040 4 + 729520 GCTT s ponAbe2.chr19 56121765 4 + 60714840 GCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884341 4 - 106955855 GCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60143948 4 + 64156825 GCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231456 4 + 59248254 GCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338446 4 + 51301725 gctt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47035528 4 + 50890351 GCTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102763313 0 + 122678785 C e calJac3.chr22 45564572 0 + 49145316 C a score=9128.000000 s hg38.chr19_GL949747v2_alt 312044 7 + 729520 CCCTCtt s ponAbe2.chr19 56121769 7 + 60714840 CCCTCtt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60143952 7 + 64156825 CCCTCtt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231460 7 + 59248254 CCCtctt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338450 7 + 51301725 ccctcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47035532 7 + 50890351 CCCTCCt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102763313 0 + 122678785 C e calJac3.chr22 45564572 0 + 49145316 C e nomLeu3.chr10 102884345 0 - 106955855 C a score=16878.000000 s hg38.chr19_GL949747v2_alt 312051 26 + 729520 ttttttttttttttcttttttttttt s rheMac3.chr19 60143959 26 + 64156825 tttttttttttaattttatgttttgt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231467 26 + 59248254 tttttttttttaattttatgttttgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338457 26 + 51301725 tttttttttttttttttttttttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47035539 26 + 50890351 tttttttttttttttttttttttttt i chlSab2.chr6 C 0 I 20546 e canFam3.chr1 102763313 0 + 122678785 C e ponAbe2.chr19 56121776 0 + 60714840 C e calJac3.chr22 45564572 0 + 49145316 C e nomLeu3.chr10 102884345 0 - 106955855 C a score=-1780.000000 s hg38.chr19_GL949747v2_alt 312077 1 + 729520 --g s papAnu2.chr19 47338483 1 + 51301725 -a- i papAnu2.chr19 C 0 I 7 s chlSab2.chr6 47056111 1 + 50890351 t-- i chlSab2.chr6 I 20546 C 0 e canFam3.chr1 102763313 0 + 122678785 C e ponAbe2.chr19 56121776 0 + 60714840 C e calJac3.chr22 45564572 0 + 49145316 C e nomLeu3.chr10 102884345 0 - 106955855 C e macFas5.chr19 55231493 0 + 59248254 C e rheMac3.chr19 60143985 0 + 64156825 C a score=846.000000 s hg38.chr19_GL949747v2_alt 312078 3 + 729520 aga s rheMac3.chr19 60143985 3 + 64156825 aga i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47056112 3 + 50890351 aga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102763313 0 + 122678785 C e ponAbe2.chr19 56121776 0 + 60714840 C e calJac3.chr22 45564572 0 + 49145316 C e nomLeu3.chr10 102884345 0 - 106955855 C e papAnu2.chr19 47338484 7 + 51301725 I e macFas5.chr19 55231493 0 + 59248254 C a score=6694.000000 s hg38.chr19_GL949747v2_alt 312081 108 + 729520 cggagtcttgctctgtcacccaggctgcagtgcagcggcgtgatctgggctcactgcaagctccgcctcccgggttcacgccattctcctgccacagcctcccgagta s chlSab2.chr6 47056115 107 + 50890351 cgaagtcttgctctgtta-ccaggctggagtgcagtgtctcaatctcggctcagtgaaacttccgcctcccaggttcaagcgattctcctgcctcagcctcccaagta i chlSab2.chr6 C 0 T 10034 e canFam3.chr1 102763313 0 + 122678785 C e ponAbe2.chr19 56121776 0 + 60714840 C e calJac3.chr22 45564572 0 + 49145316 C e nomLeu3.chr10 102884345 0 - 106955855 C e papAnu2.chr19 47338484 7 + 51301725 I e macFas5.chr19 55231493 0 + 59248254 C e rheMac3.chr19 60143988 0 + 64156825 C a score=0.000000 s hg38.chr19_GL949747v2_alt 312189 169 + 729520 gctgggactacaggcgcccaccaccacacccacctaattttttgtatttttagtagagacagggtttcaccatgttagccaggatggtctcgatctcctgacctcatgatccgcccgtctcagcctcccaaagtgctgggattacaggcatgagccaccacgcccagcc e canFam3.chr1 102763313 0 + 122678785 C e ponAbe2.chr19 56121776 0 + 60714840 C e calJac3.chr22 45564572 0 + 49145316 C e nomLeu3.chr10 102884345 0 - 106955855 C e chlSab2.chr6 47056222 10034 + 50890351 T e papAnu2.chr19 47338484 7 + 51301725 I e macFas5.chr19 55231493 0 + 59248254 C e rheMac3.chr19 60143988 0 + 64156825 C a score=491.000000 s hg38.chr19_GL949747v2_alt 312358 5 + 729520 CCCTC s nomLeu3.chr10 102884345 5 - 106955855 CCCTC i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102763313 0 + 122678785 C e ponAbe2.chr19 56121776 0 + 60714840 C e calJac3.chr22 45564572 0 + 49145316 C e chlSab2.chr6 47056222 10034 + 50890351 T e papAnu2.chr19 47338484 7 + 51301725 I e macFas5.chr19 55231493 0 + 59248254 C e rheMac3.chr19 60143988 0 + 64156825 C a score=2047.000000 s hg38.chr19_GL949747v2_alt 312363 9 + 729520 ttttttttt s ponAbe2.chr19 56121776 9 + 60714840 ttttttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884350 9 - 106955855 ttttttttg i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102763313 0 + 122678785 C e calJac3.chr22 45564572 0 + 49145316 C e chlSab2.chr6 47056222 10034 + 50890351 T e papAnu2.chr19 47338484 7 + 51301725 I e macFas5.chr19 55231493 0 + 59248254 C e rheMac3.chr19 60143988 0 + 64156825 C a score=546.000000 s hg38.chr19_GL949747v2_alt 312372 1 + 729520 t s ponAbe2.chr19 56121785 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884359 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47338491 1 + 51301725 t i papAnu2.chr19 I 7 C 0 e canFam3.chr1 102763313 0 + 122678785 C e calJac3.chr22 45564572 0 + 49145316 C e chlSab2.chr6 47056222 10034 + 50890351 T e macFas5.chr19 55231493 0 + 59248254 C e rheMac3.chr19 60143988 0 + 64156825 C a score=1964.000000 s hg38.chr19_GL949747v2_alt 312373 3 + 729520 agt s ponAbe2.chr19 56121786 3 + 60714840 aga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884360 3 - 106955855 aga i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55231493 3 + 59248254 aga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338492 3 + 51301725 aga i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102763313 0 + 122678785 C e calJac3.chr22 45564572 0 + 49145316 C e chlSab2.chr6 47056222 10034 + 50890351 T e rheMac3.chr19 60143988 0 + 64156825 C a score=228187.000000 s hg38.chr19_GL949747v2_alt 312376 181 + 729520 tggagtcttgctctgtcaccaggctggagtgtagtggcacagtctcagctcactgcaagctccgcctcccgggttcaagtgattctcccacctcagcctcccaagtagctgggactacaggtgcacaccaccacgcccagctaatttttgtatttttagtagagacggggtttcaccatgt s ponAbe2.chr19 56121789 181 + 60714840 tggagtcttcctctgtcaccaggctggagtgcactggcacaatctcagctcattgcaacttccgcctcccgggttcaagtgattctcccgcctcagcctcccaagtagctgggactacaggtgcacaccaccacacccagctattttttgtatttttagtagagatggggtttcaccatgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884363 181 - 106955855 tggagtctcactctgtcaccaagctggagtgtagtggcacaatctcggctcactgcaagctccgcctcccggattcaagtgattctcctgcctcagcctcccaagtagctgggattacaggtgcctgccaccacgcccagctaatttttgtatttttagtagagacggggtttcaccatgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60143988 181 + 64156825 tggagtcttgctctgtcagtaggctagagtgcagtggcacaatctcggcccagtgaaacttccgcctcccaggttcaagcgattctcctgcctcagcctcccaagtagttgggactacaggcacccgccaccacgcccagctaatttttgtatttttagtagagacggggtttcaccatgt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231496 181 + 59248254 tggagtcttgctctgtcaccaggctagagtgcagtggcacaatctcggctcagtgaaacttccgcctcccaggttcaagcgattctcctgcctcagcctcccaagtagttgggactacaggtgcccgccaccacgcccagctaatttttgtatttttagtagagacggggtttcaccatgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338495 181 + 51301725 tggagtcttgctctgttaccaggctggagtgcagtggcacaatctcggctcagtgaaacttccacctcccaggttcaagcgattctcctgcctcagcctcccaagtagttgggactacaggtgcccgccaccacacccagctaatttttgtatttttagtagagacggggtttcaccatgt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102763313 0 + 122678785 C e calJac3.chr22 45564572 0 + 49145316 C e chlSab2.chr6 47056222 10034 + 50890351 T a score=55586.000000 s hg38.chr19_GL949747v2_alt 312557 31 + 729520 tggccaggatggtctcgatctcttgacctca s ponAbe2.chr19 56121970 31 + 60714840 tggccaggatggtctcgatctcttgacctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884544 31 - 106955855 tggccaggatgttctccatctcttgacctca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144169 31 + 64156825 tggccaggctgctctcgatctcttgacctca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231677 31 + 59248254 tggccaggctggtctcgatctcttgacctca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338676 31 + 51301725 tggccaggctggtctcgatctcttgacctca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47046188 31 + 50890351 tggccaggctggtcttgatctcttgacctca i chlSab2.chr6 T 10034 C 0 e canFam3.chr1 102763313 0 + 122678785 C e calJac3.chr22 45564572 0 + 49145316 C a score=146700.000000 s hg38.chr19_GL949747v2_alt 312588 62 + 729520 tgatctgcctgccttggcctctcaaagtgctgggattacaggcatgagccaccgcgaccggc s panTro4.chr19 59264813 62 + 63644993 tgatctgcctgccttggcctctcaaagtgctgggattacaggcgtgaaccaccgcgaccggc i panTro4.chr19 N 0 C 0 s ponAbe2.chr19 56122001 62 + 60714840 tgatccgcccgccttggcctctcaaagtgctgggattacaggtgtgagccaccgcgcccagc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884575 62 - 106955855 tgatccacccgccttggcctcccaaagtgctgggattacaggggtgagccaccgcgcccggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144200 62 + 64156825 tgatccgcccgctttggcctctcaaagtgctgggattacaggcgtgagccaccgcacccggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231708 62 + 59248254 tgatccgcccgctttggcctctcaaagtgctgggattacaggcgtgagccaccgcacccggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338707 62 + 51301725 tgatccgcctgccttagcctctcaaagtgctgggattacaggtgtgagccaccgcacccggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47046219 62 + 50890351 tgatccgcccaccttggcctctcaaagtgctgggattacaggcgtgagccactgcacctggc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102763313 0 + 122678785 C e calJac3.chr22 45564572 0 + 49145316 C a score=16628.000000 s hg38.chr19_GL949747v2_alt 312650 5 + 729520 cCTGG s panTro4.chr19 59264875 5 + 63644993 cCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122063 5 + 60714840 cCTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884637 5 - 106955855 cCTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144262 5 + 64156825 cCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231770 5 + 59248254 cCTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338769 5 + 51301725 cctGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47046281 5 + 50890351 cCTGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102763313 5 + 122678785 CCTGA i canFam3.chr1 C 0 C 0 e calJac3.chr22 45564572 0 + 49145316 C a score=527548.000000 s hg38.chr19_GL949747v2_alt 312655 170 + 729520 GCTTCCCTCTTTATCCAATCGGTACTCCTGGGCCTCCAGGTTCCCCTGACACCAGAGGGTCACAGGCCTCTCCCAGGTGATCACAGAGCCTGTCTCAGCCCATGGGGAGGGTTTGGGGAAGGG-----CCCTGAAATGGAACCAGAGGCTGGGTCCCAAGATCTCTTTCACTCCT s panTro4.chr19 59264880 170 + 63644993 GCTTCCCTCTTTATCCAATCAGTACTCCTGGGCCTCCAGGTTCCCCTGACACCAGAGGGTCACAGGCCTCTCCCAGGTGATCACAGAGCCTGTCTCAGCCCATGGGGAGGGTTTGGGGAAGGG-----CCCTGAAATGGAACCAGAGGCTGGGTCCCAAGATCTCTTTCACTCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122068 168 + 60714840 GCTTCCCTC--TATCCAGTCGGTATTCCTGGGTCTCCAGGTTCCCCTGACACCAGAGGGTCACAGGCCTCTCCTAGGTGATCACAGAGCCTGTCTCAACCCGTGGGGAGGGTTTGGGAAAGGG-----CCCTGAAATGGAACCAGAAGGTGGGTCCCAAGATCTCTTTCACTCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884642 169 - 106955855 GCTTCCTTT-TTATCCAGTTGGTACTCCTGGGCTTCCAGGTACCCCTGACACCAGAGGGTCACAGGCCTCTCCCGGGTGATCACAGAGCCTGTCTCAGCCCATGGGGAGGGTTTGGGGAAGGG-----CCCTGAAATGGAACCAGAGGCTGGGTCCCAAGATCTCTTTCACTCCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144267 173 + 64156825 GCTTCCCTCTTTATCCAGTCGGTACTCCTGGGCCTCCAGGTTCCCCTGACACCAGACA--CACAGGCCTCTCCCAGGTGATCACAGAGCCTGTCTCAGCCCATGGGGAGGGTTTGGGGAAGGAATGGTTCCTGAAATGGAACCAGAGACTGGATCCCAAGATCTCTTTCACTCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231775 173 + 59248254 GCTTCCCTCTTTATCCAGTCGGTACTCCTGGGCCTCCAGGTTCCCCTGACACCAGACA--CACAGGCCTCTCCCAGGTGATCACAGAGCCTGTCTCAGCCCATGGGGAGGGTTTGGGGAAGGAATGGTTCCTGAAATGGAACCAGAGACTGGATCCCAAGATCTCTTTCACTCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338774 173 + 51301725 GCTTCCCTCTTTATCCAGTCGGTACTCCTGGGCCTCCAGGTTCCCCTGACACCAGACA--CACAGGCCTCTCCCAGGTGATCACAGAGCCTGTCTCAGCCCATGGGGAGGGTTTGGGGAAGGAATGGTTCCTGAAATGGAACCAGAGACTGGATCCCAAGATCTCTTTCACTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47046286 173 + 50890351 GCTTCCCTCTTTATCCAGTCGGTACTCCTGGGCCTCCAGGTTCCCCTCACACCAGACA--CACAGGCCTCTCCCAGGTGATCACAGAGCCTGTCTCAGCCCATGGGGAGGGTTTGGGGAAGGAATGGTTCCTGAAACGGAACCAGAGACTGGATCCCAAGATCTCTTTCACTCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45564572 169 + 49145316 ACCTCCATCTTTAGCCAGACGGTACTCCTGGGCCTCCTGGGTGCCCTGACACCAGAGGGTCACAGGCTTATTCCAGGTGCTCACGGGACCTGGCTCAGCCCACAAGATGGGTTGGAGTAGGTT-----CTCTGGGAGGAAACCACAGGTTAGGCCCCAAGATGTC-CCCACCCCT i calJac3.chr22 C 0 T 19652 s canFam3.chr1 102763318 167 + 122678785 GTGTCCCTCTTTATGGAGGTGGCACTCCTGGGCCTTCAGGCTCCCCTTACAACAGATGGTTGCAGGTGTCTTCAAGGGGATCACAGAGCCTGGCTTAGTCCAGATGGTGGGTGTGGGGAGGGT-----CCCTGGAAGGAAAC---AGGCTGGGTCACAAGACCCTCCCCACCTTC i canFam3.chr1 C 0 C 0 a score=169201.000000 s hg38.chr19_GL949747v2_alt 312825 60 + 729520 GGTTCTCTAGTTTAGTCCAAAACCCCTCTCTGTTTTATCACCCTCAGCCCAGAACAACTG s panTro4.chr19 59265050 60 + 63644993 GGTTCTCTAGTTTAGTCCAAAACCCCTCTCTGTTTTATCACCCTCAGCCCAGAACAACTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122236 60 + 60714840 GGTTCTCCAGCTTAGTCCAAAATCCCTCTCTGTTTTGTCACCCTCAGCCCAGAATGACTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884811 60 - 106955855 GGTTCTCCAGCTTAGTCCAAAACTCCTCTCTGTTTTATCACCCTCAGCCCAGAACGACTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144440 60 + 64156825 GGTCCTCCAGCTTAGTCCAAAACCCCTCTCTGTTTTATCACCCTCAGCCCAGAACGACTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231948 60 + 59248254 GGTCCTCCAGCTTAGTCCAAAACCCCTCTCTGTTTTATCACCCTCAGCCCAGAACGACTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338947 60 + 51301725 GGTTCTCCAGCTTAGTCCAAAACCCATCTCTGTTTTATCACCCTCAGCCCAGAACGACTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47046459 60 + 50890351 GGTCCTCCAGCTTAGTCCAAAACCCCTCTCTGTTTTATCACCCTCAGGCCAGAAAGACTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45545089 58 + 49145316 GATTCCAGCTCTCAGTCAAGGACCCTCCAGACCCCCATCA--GTCAGCCCAGAACTGCTG i calJac3.chr22 T 19652 C 0 s canFam3.chr1 102763485 59 + 122678785 AGTTC-CCAGCTCAGCCCCAAACCCCCAGGTGCCCCGCCTCTGTCAGCCCAGAGCTGTTG i canFam3.chr1 C 0 I 11036 a score=16948.000000 s hg38.chr19_GL949747v2_alt 312885 8 + 729520 TG-CCCCCC s panTro4.chr19 59265110 8 + 63644993 TG-CCCCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122296 8 + 60714840 TG-CCTCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884871 8 - 106955855 TG-CCCCCG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144500 8 + 64156825 TG-CCCCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55232008 9 + 59248254 TGCCCCCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47339007 9 + 51301725 TGccccccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47046519 8 + 50890351 TG-CCCCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45545147 8 + 49145316 TT-CCCCTC i calJac3.chr22 C 0 T 2854 e canFam3.chr1 102763544 11036 + 122678785 I a score=516959.000000 s hg38.chr19_GL949747v2_alt 312893 211 + 729520 AA-CCTGAGAGCCCAGGGGCTGGAGTAAGAGGGAGGCTCGTGGAGAACCTGGTAGCCCCTTCTCCCTCCATCACTGACTGAGGCAGAGAAGCACGAACACCGTGATGCCTGCTCTGGGGGCTCCAGCTGTGGGAGAGGAGACCACAGGGCCCTCCAGGACAGACAGACACACGGATGTGGTCACTCAGAGCCTGCTGCTGCCCGTCCAGGTA s panTro4.chr19 59265118 211 + 63644993 AA-CCTGAGAGCCCAGGGGCTGGAGTAAGAGGGAGGCTCGTGGAGAACCTGGTAGCGCCTTCTCCCTCCATCACTGACTGAGGCAGAGAAGCACGAACACCGTGATGCCTGCTCTGGGGGCTCCAGCTGTGGGAGAGGAGACCACAGGGCCCTCCAGGACAGACAGACACACGGATGTGGTCACTCAGAGCCTGCTGCTGCCCGTCCAGGTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122304 212 + 60714840 AACCCTGAGATCCCAGGGGCTGGAGTAAGAGGGAGGCTCGTGGGGAACCTGGTAGCCCCTTCTCCCTCCATCACTGACTGAGGCAGAGAAGCACAAACATCGTGTTGCCTGCTCTAGGGGCTCCAGCTGTGGGAGAGGAGACCACAGGGCCCTCCAGGACAGAGAGACACACAGATGTGGTCACTCAGAGCCTGCTGCTACCCGTCCAGGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884879 212 - 106955855 AACCCCGAGAGCCCAGGGGCTGGAGTAAGAGGGAGGCTCGTGGGGAACGTGGTAGCCCCTTCTTCCTCCAACACTGACTGAGGCAGAGAAGTACTAACATCGTGTTGCCTGCTGTAGCGTCTCCAGCTGTCGGAGAGGAGACCACAGGGCCCTCCAGGACAGAGAGACACATGGATGTGGTCACTCAGAGCCTGCTGCTGCCCGTCCAGGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144508 212 + 64156825 AACCCCGAGAGCCCAGGGGCTGGAGTAAGAGAGAGGCTCGTGGAGAACCTGGTAGCCCCTTCTCCCTCCATCACTGACTGAGGCAGAGAAGCACGAACATCGTGATGCCTGCTCTGGGGGCTCCAGCTGTGGGAGAGGAGACCACAGGGCCCTCCAAGACAGAGAGATACACGGATGTGGTCACTCAGAGCCTGCTGCTGCCCATCCAGGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55232017 212 + 59248254 AACCCTGAGAGCCCAGGGGCTGGAGTAAGAGAGAGGCTCGTGGAGAACCTGGTAGCCCCTTCTCCCCCCATCACTGACTGAGGCAGAGAAGCACGAACATCGTGATGCCTGCTCTGGGGGCTCCAGCTGTGGGAGAGGAGACCACAGGGCCCTCCAAGACAGAGAGATACACGGATGTGGTCACTCAGAGCCTGCTGCTGCCCGTCCAGGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47339016 211 + 51301725 AACCCTGAGAGCCCAGGGGCTGGAGTAAGAGGGAGGCTCGTGGAGAACCTCGTAGCCCCTTCTCCCTCCATCACTGACTGAGGCAGAGAAGCACAAACAT-GTGATGCCTGCTCTGGGGGCTCCAGCTGTGGGAGAGGAGACCATAGGGCCCTCCAAGACAGAGAGATACACGGATGTCGTCACTCAGAGCCTGCTGCTGCCCGTCCAGGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47046527 212 + 50890351 AACCCCGAGAGCCCAGGGGCTGGAGTAAGAGGGAGGCTCGTGGAGAACCTGGTAGCCCCTTCTCCCTCCATCACTGACTGAGGCAGAGAAGCACGAACATCGTGATGCCTGCTCTGGGGGCTCCAGCTGTGGGAGAGGAGACCACAGGGCCCTCCAAGACAGAGAGATACATGGATGTGGTCACTCAGAGCCTGCTGCTGCCCGTCCAGGTC i chlSab2.chr6 C 0 T 24924 e canFam3.chr1 102763544 11036 + 122678785 I e calJac3.chr22 45545155 2854 + 49145316 T a score=263319.000000 s hg38.chr19_GL949747v2_alt 313104 110 + 729520 CCCACAGCTGTGGACCCACAGGAAGGGAAACTGCTTTTCCCTGGGCCTGGCTCTGGTTTTCCCTGGGTGGGGG-------AGCTCAGGAGGACCCCAGACTCTCTGGACACATGAGC s panTro4.chr19 59265329 110 + 63644993 CCCACAGCTGTGGACCCACAGGAAGGGAAACTGCTTTTCCCTGGACCTGGCTCTGGTTTTCCCTGGGTGGGGG-------AGCTCAGGAGGACCCCAGACTCTCTGGACACATGAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122516 110 + 60714840 CCCACAGCTGTGGACCCACAGGAAGGGAAACTGCTTTTCCCTGGGCCTGGCTCTGGTTTTCCCTGGGTGTAGG-------GGCTCAGGAGGACCCCAGGCTCTCTGGACACATGAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102885091 109 - 106955855 CCCACAGCTGTGGACCCACAGG-AGGGAAACTGCTTTTCCCTGGGTCTGGCTCTGGTTCTCCCTGGGTGGGGG-------GGTTCAGGAGGACCCCAGACTCTCTGGACACATGAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144720 117 + 64156825 CCCACAGCTGTGGACCCACAGGAAGGGAAACTGCTTTTCTCTGGGTTTGGCTCTGGTTTTCCCTGGGTGGGGAGGGGGATGGCTTGGGAGGACCCCAGACCCTCTGGACACATGAGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55232229 117 + 59248254 CCCACAGCTGTGGACCCACAGGAAGGGAAACTGCTTTTCTCTGGGTTTGGCTCTGGTTTTCCCTGGGTGGGGAGGGGGATGGCTTGGGAGGACCCCAGACCCTCTGGACACATGAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47339227 117 + 51301725 CCCACAGCTGTGGACCCACAGGAAGGGAAACTGCTTTTCCCTGGGCCTGGCTCTGGTTTtccctgggtggggaggggggtggcTTGGGAGGACCCCAGACCCTCTGGACACATGAgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47021815 117 + 50890351 cccACAGCTGTGGACCCACAGGAAGGGAAACTGCTTTTCCCTGGGCTTGGCTCTGTTTTTCCCTGGGTGGGGGGTGGGGGGGCTCGGGAGGACCCCAGACCCTCTGGACACATGAAC i chlSab2.chr6 T 24924 C 0 e canFam3.chr1 102763544 11036 + 122678785 I e calJac3.chr22 45545155 2854 + 49145316 T a score=976181.000000 s hg38.chr19_GL949747v2_alt 313214 356 + 729520 CTCTGCTCCCCTCCCCTGCCCCAGGTCACC------GTCTCTGCTGCAGGTGGGACAGGACAGGCCCCTGTGGAATCGGGT-CTGGGAGT-TTCCCTGGGAGGCCTCCTCTCCCAGGAGGTCACAGCTGGGAgtcagagctgaaaggaactttcccaccc-gcaggcctctctcctttacacttggagaaactgaggcccaggcagaggaggggcctgtccacatcaccacctccagaggagcctcaaaccgatgacagaactcagcccttccTCCCCTGGACCCCGCCCATCTCCCACTCAAAGCCCCTCACTTAGCACTGTGGGGGCCTGACGTTGTGGGGGTGAGGGGCTGGTCCTCAGGGC s panTro4.chr19 59265439 356 + 63644993 CTCTGCTCCCCTCCCCTGCCCCAGGTCACT------GTCTCTGCTGCAGGTGGGACAGGACAGGCCCCTGTGGAATCGGGT-CTGGGAGG-TTCCCTGGGAGGCCTCCTCTCCCAGGACGTCACAGCTGGGAgtcagagctgaaaggaactttcccaccc-gcaggcctctctcctttacacttggagaaactgaggcccaggcaggggaggggcctgtccaCATCACCATCACCAGAGGAGCCTCAAACCGATGACAGAACTCAGCCCTTCCTCCCCTGGACCCCGCCCACCTCCCACTCAAAGCCCCTCACTCAGCACTGTGGGGGCCTGACGTTGTGGGGGTGAGGGGCTGGTCCTCAGGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122626 357 + 60714840 CTCTGCTCCCCTCCCCTGCTCCAGGTCACT------GTCTCTGCTGCAGGTGGGACAGGACAGGCCCCTATGGAATCGGGT-CTGGGAGGCTTCCCTGGGAGGTCTCCTCTCCTAGGAGGTCACAGCTGGGAgtcagagctgaaaggaactttcccaccc-ggaggcctctcacctttacacttggagaaactgaggcccaggcaggggaggggcctctccacgtcaccatcaccagaggagcctcaaaccggtgacagaactcagcccttcctcccctggactccgtccacctcccactcaaagcccctcACTCAGCACTCTGGGGGCCTGATGCTGTGGGGTTGAGGAGCTGGTCCTCAGGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102885200 355 - 106955855 CTCTGCTCCCCTCCCCTGCCCCAGGTCACC------GTCTCTGCTGCAGGTGGGACAAGACAGGCCCCTATGGAATCGGGT-CTGGGAGG-CTCCCTGGGAGGTCTCCTCTCCCAGGAGGTCACATCTGGGAgtcagagctgaaaggaactttcccaccc-agaggcctctcgcctttacacttggagaaacggaggcccaggcaggggaggggcctgtccacatcaccatcaccagaggagcctcaaactgatgacagaactcagcccttcctcccCTGGACCCCGCCCACCTCCCACTTAAAGCCCCTCACTCAGCACTGTGGGGGCCTGATGCTGTGGGG-TGAGGGGCTGGTCCTCAGGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144837 341 + 64156825 CTCTGCTCCCCTCCCCTGCCCCAGGTCACC------GTCACTGCTGCAGGTGGGAAAGGACAGGCCCCTATGGAATCGGGTCCTGGGAGGCTTCCCTGGGAGGTCTCCTTTCCCAGGAGGTCCCAGCTGGGAgtcagagctgaaaggaactttcccaccc-gcaggcctctttcctttacacctggagaaactgaggcccaggcaggggaggggcctgtccatgtcaccatcaccagaggagcctcaaactgatgacggaactcagcccttcctcccCTGGACCTCGCCCACCTCCCACTCAAAGCCCTGCA-----------------CTGACCCCATGGGGGTGAGGGGCTGGTCCTCATGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55232346 341 + 59248254 CTCTGCTCCCCTCCCCTGCCCCAGGTCACC------GTCACTGCTGCAGGTGGGAAAGGACAGGCCCCTATGGAATCGGGTCCTGGGAGGCTTCCCTGGGAGGTCTCCTTTCCCAGGAGGTCCCAGCTGGGAgtcagagctgaaaggaacgttcccaccc-gcaggcctcttgcctttacacctggagaaactgaggcccaggcaggggaggggcctgtccatgtcaccgtcaccagaggagcctcaaactgatgacggaactcagcccttccTCCCCTGGACCTCGCCCACCTCCCACTCAAAGCCCTGCA-----------------CTGACCCCATGGGGGTGAGGGGCTGGTCCTCATGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47339344 358 + 51301725 ctctgctcccctcccctgccccaggtCACC------GTCACTGCTGCAGGTGGGAAAGGACAGGCCCCTATGGAATCGGGTCCTGGGAGGCTTCCCTGGGAGGTGTCCTCTCCCAGGAGGTCCCAGCTGGGAGTCAGAGCTGAAAGGAACTTTCCCACCC-GGAGGCCGCTCGTCTTTACacttggagaaactgaggcccaggcaggggagGGGCCTATCCATGTCACCATCACCAGAGGAGCCTCAAACTGATGACGGAACTCAGCCCTTCCTCCCCTGGACCCCACTCACCTCCCACTCAAAGCCCTGCACTCACCCCTGTAGAGGCCTGACCCCATGGGGGTGAGGGGCTGGTCCTCATGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47021932 357 + 50890351 CTCTGCTCCCCTCCCCTGCCCCAGATCACT------GTCACTGCTGCAGGAGGGAAAGGACAGGCCCCTATGGAATCGGGTCCTGGGAGGCTTCCCTGGGAGGTCTCCTTTCCCAGGAGGTCCCAGCTGGGAgtcagagctgaaaggaactttcccaccc-gcaggcctcttgcctttacacttggagaaactgaggcccaggcaggggaggggcctatccatgtcaccatcaccagaggagcctcaaactgatgacagaactcagcccttcctcccctggaccctgcccacct-ccactcaAAGGCCCTCACTCACCACTCTGGGGGCCTGACCCCATGGGGGTGAGGGGCTGGTCCTCATGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542301 323 + 49145316 CCCTGCTCCCCTCCTCTGCCCCAGGTCACCGTCACTGTCACTGCTGCAGTTGGGACAGGACAGGCTCCTGAGGAATCAGGC-CTGGGAGGCTTCCCTAGGTGGCCTCCTCTCTCAGGAGGTCACAGCTGGGAgtcagagctaaaaggaactttcccaccctgcaggcctctctcctttacacttggagaaactgaggcctaggcaggggaggggcct-----------------------------------------GAACTGAGCCCTGCCTCCCCTGGACCCCACCCACCTCCCGCTCAGAGACCCCGACTAACCACTGTGGGGATCTGGCTCCATGGGAGTGAAAAGCTGGTCCTCAGGGA i calJac3.chr22 T 2854 T 56022 e canFam3.chr1 102763544 11036 + 122678785 I a score=26313.000000 s hg38.chr19_GL949747v2_alt 313570 10 + 729520 CTGCTGGGTC s panTro4.chr19 59265795 9 + 63644993 -TGCTGGGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122983 10 + 60714840 CTGCTGGGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102885555 10 - 106955855 CTGCTGGGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145178 10 + 64156825 CTGTTAGGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55232687 10 + 59248254 CTGTTAGGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47339702 10 + 51301725 CTGTTAGGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022289 10 + 50890351 CCGTTGGGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45486602 10 + 49145316 CTGCTGGGTC i calJac3.chr22 T 56022 C 0 e canFam3.chr1 102763544 11036 + 122678785 I a score=674067.000000 s hg38.chr19_GL949747v2_alt 313580 250 + 729520 AGGATGGGGAGGTGAGGGCTGGGGCTGCCCTGCTCCCCACGTCAGCCCGGCTGCTCCT-CCCCAGGCTGGGCCCCAACATCTCCCTCTGCCTCGACCCCC-ACCCCTCACCAGCCCAGCCTCAGAGCCCCGGGGAGCCTGTGGCCCCTCCTCTGGCTCTGCCTCAGCTCCCTGGAGGGAAGCTCGTGCTTGAGTCCTTGAGGGGAATGGGATCATC-TGGGAGACTCAGGACTGCCCTGGGGGAGGCCACCCT s panTro4.chr19 59265804 251 + 63644993 AGGATGGGGAGGTGAGGGCTGGGGCTGCCCTGCTCCCCACGTCAGCCTGGCTGCTCCT-CCCCAGGCTGGGCCCCAACATCTCTCTCTGCCTCGACCCCCTGCCCCTCACCAGCCCAGCCTCAGAGCCCCGGGGAGCCTGTGGCCCCTCCTCTGGCTCTGCCTCAGCTCCCTGGAGGGAAGCTCGTGCTTGAATCCTTGAGGGGAATGGGATCATC-TGGGAGACTCAGGACTGCCCTGGGGGAGGCCGCCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122993 251 + 60714840 AGGATGGGGAGGTGAGGGCTGGGGCTGCCCTGCTCCCCACGTCAGCCCAGTTGCTCCTCCCCCAGGCTGGGCCCCAACATCTCTCTCTGCCTCGACCCCCCGCCCCTCACCAGCCCAGCCTCAGAGCCCCGGGGAGCCTGTGGCCCCTCCTCTGGCTCTGCCTCAGCTCCCTGGAGGGAAACTCGTGCTTG-GTCCTTGAGGGGAATGGGATCATC-TGGGAGACTCAGGACTGCCCTGGGGGAGGCTGCCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102885565 251 - 106955855 AGGACGGGGAGGGGAGGGCTGGGGCTGCCCTGCTCCCCATGTCAGCCTGGCTGCTCCTCCCCCAGGCTGGGCCCCAACATCTCTCTCTGCCTCGACCGCCCGCCCCTCACCAGCCCAGCCTCAGAGCCCCGGGGAGCCTGTGGCCCCTCCTCTGGCTCTGCC-CAGCTCCCTGGAGGGAAGCTCGTGCTCGAGTCCTTGAGGGGAATGGGATCACC-TGGGAGACTCAGGACTGCCCTGCGGGAGGCCGCTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145188 235 + 64156825 AGGACAGGCAGGGGAGGGCTGGGACTGCCCTGCTCCCCACGTCAGCCAGGCTGCTCCTTCCCCAGGCTGGGCCCCAACATCTTGCTCTGCCTCGACCCC--GCCCCTCACCAGCCCAGCCT--GAGCCCCTGGGAGCCTGTGGCCCCTCCTCTGGCT-------------CTGGAGGGAAGCCGGTACTTGAGTCCTTGAGGGGAATGGGATCCTC-TGGGAGACTCAGGACTGCCCTGCGGGAGGCCGCCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55232697 235 + 59248254 AGGACAGGCAGGGGAGGGCTGGGACTGCCCTGCTCCCCACGTCAGTCAGGCTGCTCCTTCCCCAGGCTGGGCCCCAACATCTCCCTCTGCCTCGACCCC--GCCCCTCACCAGCCCAGCCT--GAGCCCCTGGGAGCCTGTGGCCCCTCCTCTGGCT-------------CTGGAGGGAAGCCGGTACTTGAGTCCTTGAGGGGAATGGGATCCTC-TGGGAGACTCAGGACTGCCCTGCGGGAGGCCGCCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47339712 227 + 51301725 AGGACAGGCAGGGGAGGGCTGGGACTGCCCTGCTCCCCACGTCAGCCTGGCTGCTCCTTCCCCAGGCT-GGCCCCAGCATCTCCCTCTG-------CCC--GCCCCTCACCAGCCCAGCCT--GAGCCCCTGGGAGCCTGTGGCCCCTCCTCTAGCT-------------CTGGAGGGAAGCACGTGCTTGAGTCCTTCAGGGGAATGGGATCCTC-TGGGAGACTCAGGACTGCCCTGCGGGAGGCCGCCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022299 235 + 50890351 AGGACGGGGAGGTGAGGGCTGGGACTGCCCTGCTCCCCACATCATCCAGGCTGCTCCTTCCCCAGGCTGGGCCCCAGCATCTCCCTCTGCCTAGACCCC--GCCCCTCACCAGCCTAGCCT--GAGCCCCTGGGGGCCTGTGGCCCCTCCTCTGGCT-------------CTGGAGGGAAGCCCGTGCTTGAGTCCTTGAGGGGAACGGGATCCTC-TGGGAGACTCAGGACTGCCCTGCGGGAGGTTGCCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45486612 246 + 49145316 ACGATGGGGAGCTGAGGGCTGGGGCTGTCCTGCTCCCCACGTCACCC---CAGCTCCTCCCCCAGGCTGGGCCCCAACATCTCCCTCTGCCCCGACACTCCACCCCTCATCAGCCCAGCCTCAGAGCCCCTGGGAGCCTGTGGCCCCCGCTCTGTCTCTGCC-CAACTCTCTGGA-GGAGGCGTGTGCT-GAGTCCGTGAGGGGGACAGGATCCTC-TGGGAGACTCGGCCCTGCCCTGGGGGAGGCCACGCT i calJac3.chr22 C 0 I 70660 s canFam3.chr1 19732406 189 - 122678785 AGGACAGGGAGGTGAGGAGGTAGGCTCCTGAGCTCCCCACTTCAGCCTGGCTGCTCTTCCCCCAGCTGGGGCCCCAGTCTATCCCTCTGCC----------ATCCTCCTCCG--CCGGCCTCAGAGCTCCTGGAGCCCTGTGG---------TGGCC-------------------TGCCATCCCTGCCTGACTCCC---------AGCCATCCTCTTGAGAGA------------CTGGGAGAAATGAT--- i canFam3.chr1 I 720 C 0 a score=698083.000000 s hg38.chr19_GL949747v2_alt 313830 223 + 729520 CCCTCTGAGCCCAGAGGCCTCAATGACTCACCAGGTATGGAGAAGGAGCCTATG------GGTGGAGGGCTGGGGCCCCTGGAGGGTCCTGGGAAGGAGCACAGAAAGGGAGTGAGGAATTGGAGC-TATCCTGGAGTCCCCACCTCCACTCAAAGCTCTCCTCTCCATCTGCCCAGTGGCCTCTCCAAGACCCTCCCTCTTCCCACCTAGCACC-TTCTGGACTCCAGGT s panTro4.chr19 59266055 223 + 63644993 CCCTCTGAGCCCAGAGGCCTCAATGACTCACCAGGTACGGAGAAAGAGCCTATG------GGTGGGGGGCTGGGGCCCCTGGAGGGTCCTGGGAAGGAGCACAGAAAGGGAGTGAGGAATTGGAGC-TATCCTGGAGTCCCCACCTCCACTCAAAGCTCTCCTTTCCATCTGCCCAGTGGCCTCTCCAAGACCCTCCCTCTTCCCACCTAGCACC-TTCTGGACTCCAGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123244 223 + 60714840 CCCTCCTAGCCCAGAGGCCTCAATGACTCACCAGGTGTGGAGGAGGAGCCTGTG------GGTGGGGGGCTGGGGCCCCTGGAGGGTCCTGGGAATGAGCACAGAAAGGGAGTGAGGAATTGGAGC-TATCCTGGAGTCCCCACCTCCACTCAAAGCTCTCCTCTCCATCTGCCCGGTGGCCTCTCCGAGACCATCCCTCTTCCCACCTAGCACC-TTCTGGACTCCAGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102885816 223 - 106955855 CCCTCCGAGCCCAGAGGCCTCAATGACTCACCAGGTGTGGAGGAGGAGCCTGTG------GGTGGGGGGCTGGGGTCCCTGGAGGGTCCTGGGAATGAGCACAGAAAGGGAGTGAGGAATTGGAGC-TATCCTGGAGTCCCCACCTCCACTCAAAGCTCTCCTCTCCATCTGCCCGGTGGCCTCTCCAAGACCCTCCCTCTTCCCACCTGGCACC-TTCTGGACTCCAGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145423 223 + 64156825 CTCTCCGAGCCCAGAGGCCTCAATGACTCACCCGGTGTGGAGGAGGAGCCTGTG------GGTTGGGGGCTGGGATCCCTGGAGGGTCCTGGGAATGGGCACAGAAAGGGACTGAGGAATTGGAGC-TATCCTGCAGTCCCCACCTCCACTCAAAGCTCTCCCCTCCGTCTGCCCGGTGGCCTCTCCAAGACCCTCCCTCTCCCCACCTAGCACC-TTCTGGACTCCAGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55232932 223 + 59248254 CTCTCCGAGCCCAGAGGCCTCAATGACTCACCCGGTGTGGAGGAGGAGCCTGTG------GGTTGGGGGCTGGGATCCCTGGAGGGTCCTGGGAATGGGCACAGAAAGGGACTGAGGAATTGGAGC-TATCCTGCAGTCCCCACCTCCACTCAAAGCTCTCCCCTCCGTCTGCCCGGTGGCCTCTCCAAGACCCTCCCTCTTCCCACCTAGGACC-TTCTGGACTCCGGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47339939 222 + 51301725 CTCTCCGAGCCCAGAGGCCTCAGTGACTCACCAAGTGTGGAGGAGGAGCCTGTG------GATTGGGGGCTGGGATCCCTGGA-GGTCCTGGGAATGGGCACAGAAAGGGACTGAGGAATTGGAGC-TATCctgcaggccccacctccactcAAAGGTCTCCCCTCCATCTGCCCGGTGGCCTCTCCAAGaccctccctcttcccacctaGCACC-TGCTGGACTCCAGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022534 222 + 50890351 CTCTCTAAACCTAGAGGCCTCAATGACTCACCAGGTGTGGAGGAGGAGCCTGTG------GGTTGGGGGCTGGGATCCCTGGA-GGTCCTGGGAATGAGCACAGAAAGGGACTGAGGAATTGGAGC-TATCCTGCAGTCCCCACCTCCACTCAAAGCTCTCCCCTCCATCTGCCCGGTGGCCTCTCCAAGACCCTCCCTCTTCCCACCTAGCACC-TTCTGGACTCCAGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45557518 221 + 49145316 CCGTCTGAGCCTAGAGGCCTCAGT--CTCACCAGGTGTTGCGGTGGGACCAGTG------GGTGGGGGACTGGGACCCCCAGG-GGTCCTGGGAATTAGCACAGAAAGGGAGTGAGGAACTGGAAC-TATCCTGGAGTCCCCACCTCCACTTAAAGATCTCGCTTCCATCTACCTGGTGGCCTTTCCAAGTCCCTCCCTCTTCCCACCTAGCACCAATCTGGATTCCAGGT i calJac3.chr22 I 70660 T 70664 s canFam3.chr1 19732595 212 - 122678785 AACTCCCAGAACAGAAGCCCCTGTAACTCACCAGCTGGTGAGCTGGGTCCCGGGGAGTGTGGATGGGGGCTGAG-TCTCTAGAGAATCCTGGGGTAAAGGACAGTACTGG--TGGGGGGCTGGAGCTTCTCCTAGAGACCCTGTCTCTGCTCACACTCTTCTCCTTCATCTGCCC--TGGCCCAGCCTAGAGC-------------CCTGGAGAC-ATGTGGACCCTAGGT i canFam3.chr1 C 0 C 0 a score=4500.000000 s hg38.chr19_GL949747v2_alt 314053 1 + 729520 G s panTro4.chr19 59266278 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123467 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886039 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145646 1 + 64156825 G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233155 1 + 59248254 G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47340161 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022756 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45487075 1 + 49145316 G i calJac3.chr22 T 70664 C 0 s canFam3.chr1 19732807 1 - 122678785 G i canFam3.chr1 C 0 I 275 a score=12040.000000 s hg38.chr19_GL949747v2_alt 314054 4 + 729520 AAGG s panTro4.chr19 59266279 4 + 63644993 AAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123468 4 + 60714840 AAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886040 4 - 106955855 AAGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145647 4 + 64156825 AAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233156 4 + 59248254 AAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47340162 4 + 51301725 AAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022757 4 + 50890351 AAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45487076 4 + 49145316 ATGG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19732808 275 - 122678785 I a score=468730.000000 s hg38.chr19_GL949747v2_alt 314058 158 + 729520 AGAAGAGGGAGAACT--------------CCTGTTGGCTTCTTCTCCTCTGAGGG-GTGAATTCCTCTGTGGCTGAGCCTCCCTCAGAGCCCCCTTCACTCCATCTCTGCCCAGAGCTCTCCTGGGGGCAGGGC-CTGAGCTGAGTCTTTGAACTTAGAGAGGACAGGGTCAGG s panTro4.chr19 59266283 158 + 63644993 AGAAGAGGGAGAACT--------------CCTGTTGGCTTCTTCTCCTCTGAGGG-GTAAATTCCTCTGTGGCTGAGCATCCCTCAGAGCCCCCTTCACTCCATCTCTGCCCAGAGCTCTCCTGGGGGCAGGGC-CTGAGCTGAGTCTTTGAGCTTAGAGAGGACAGGGTCAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123472 155 + 60714840 AGAAGAGGGAGAACT--------------CCTGTTGG---CTTCTCCTCTGAGGG-GTGAATTCCTCTGTGGCTGAGCCTCCCTCAGAGCCCCCTTCACTCCATCTCTGCCCAGAGCTCTCCTGGGGGCAGGGC-CTGAGCTGAGTCTTTGAGCTTAGAGAGGACAGGCTCAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886044 156 - 106955855 AGAAGAGGGAGAA-----------------CTGTTGGCTTCTTCTCCTCTGGGGGCGTGAATTCCTCTGTGGCTGAGCCTCCCTCACAGTCCCCTTCACTCCATCTCTGCCCAGAGCTCTCCTAGGGGCAGAGC-CTGAGCTGAGTCTTTGAGCTTAGAGAGGACAGGGTCAGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145651 158 + 64156825 AGACGAGGGAGAACC--------------GCTGTTGGCCTCCTCTCCTCTGAGGG-GCGAATTCCTCTGTGGCCGAGCCTCCCTCAGAGCCCCCTTCACTCCATCTCTGCCCAGAGCGCTCCTGGGGGCAGGGC-CTGAGCCGAACCTTCGAACTTAGAGAGGGCAGGGTCAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233160 158 + 59248254 AGAAGAGGGAGAACC--------------GCTGTTGGCCTCCTCTCCTCTGAGGG-GCGAATTCCTCTGTGGCCGAGCCTCCCTCAGAGCCCCCTTCACTCCATCTCTGCCCAGAGCGCTCCTGGGGGCAGGGC-CTGAGCCGAACCTTCGAACTTAGAGAGGGCAGGGTCAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47340166 158 + 51301725 AGAAGAGGGAGCACC--------------CCTGTTGGCCTCCTCTCCTCTGAGGG-GCGAATTCCTCTGTGGCCGAGCCTCCCTCAGAGCCCCCTTCACTCCATCTCTGCCCAGAGCGCTCCTGGGGGCAGGGC-CTGAGCCGAACCTTCCAACTTAGAGAGGGCAGGGTCAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022761 158 + 50890351 AGAAGAGGGAGAACC--------------CCTGTTGGCCTCTTCTCCTCTGAGGG-GCGAATTCCTCTGTAGCTGAGCCTCCCTCAGAGCCCCCTTCACTCCATCTCTGCCCAGAGCGCTCCTGGGGGCAGGGC-CTGAGCCGAACCTTTGAACTTAGACAGAACAGGGTCAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45487080 171 + 49145316 GGCCAAGGGTGGGCCTGCCTGGGAGGTGGCCCATTGTCCTCCTCCCCTCTGAGGG-GTGAGTCCTGCTCTGGCTGGGCC-CCCTAACAACCCCCTACACTCCATCCCAGCCCAGAGCTCTCCTGGGGACAGACC-CTGAGCTGAACCTTTGAGCTCAGAGAGGACAGGGTCAGG i calJac3.chr22 C 0 I 75633 s canFam3.chr1 19733083 158 - 122678785 AGGGGTGCGAGGGCC--------------CCTGTTGGCTTCTTTTGAGTTGAGGG-ATAGATCTCCCTTTGAATGACCTTCCTTCAGAGCCCCCTTTTTCCCAACCCAGCCCAGGTAACCATTGAGGAAAGACCTCTGAATAGATCAACAGGACATAGAGGGGAGAGGGTTGG- i canFam3.chr1 I 275 C 0 a score=133795.000000 s hg38.chr19_GL949747v2_alt 314216 52 + 729520 GCCTTTC-----------ACCCAAGACCACCAGCTCC---------------------------------------------------GACTGCGGTGTGATAGCAGGTAGGGG s panTro4.chr19 59266441 52 + 63644993 GCCTTTC-----------ACCCAGGACCACCAGCTCC---------------------------------------------------GACTGCGGTGTGATAGCAGGTAGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123627 52 + 60714840 GCCTTTC-----------ACCCAAGACCACCAGCTCC---------------------------------------------------AACTAGGGTGTGACAGCAGGTTGGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886200 52 - 106955855 GCCTTTC-----------ACCCAAGACCACCAGCTCC---------------------------------------------------GACTGGGGTGTGACAGCAGGTAGGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145809 114 + 64156825 ACCTTTCACCCAAGACCAACCCAAGACCACCAGCTCCGCAGGGTCAGGACCTTTCACCCAAGACCGTCAACCCAAGACCACCAGCTCTGACTGGGGTGTGACAGCAGGTCGGGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233318 63 + 59248254 ACCTTTCACCCAAGACCAACCCAAGACCACCAGCTCC---------------------------------------------------GACTGGGGTGTGACAGCAGGTCGGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47340324 63 + 51301725 ACCTTTCACCCAAGACCAACCCAAGACCACCAGCTCC---------------------------------------------------GACTGGGGTGTGACAGCAGGTCGGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022919 52 + 50890351 ACCTTTC-----------ACCCAAGACCACCAGCTCC---------------------------------------------------GACTGGCGTGTGACAGCAGGTCAGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45562884 58 + 49145316 -GCCCTC-----------ACCTGAGACCACAAGCTCCAGGGGGT--------------------------------------------CACTGGGGTGAGACAGCAGGTAGGGG i calJac3.chr22 I 75633 T 4986 s canFam3.chr1 19733241 59 - 122678785 GCTTCTC-----------ACCTGAGTCCAACAGCTCCAGGGGGT--------------------------------------------CACTGGAGAATGACCACACTTGGAGG i canFam3.chr1 C 0 C 0 a score=2490.000000 s hg38.chr19_GL949747v2_alt 314268 2 + 729520 GA s panTro4.chr19 59266493 2 + 63644993 GA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123679 2 + 60714840 GA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886252 2 - 106955855 GA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145923 2 + 64156825 AA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233381 2 + 59248254 AA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47340387 2 + 51301725 AA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022971 2 + 50890351 AA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19733300 2 - 122678785 GT i canFam3.chr1 C 0 I 5191 e calJac3.chr22 45562942 4986 + 49145316 T a score=108834.000000 s hg38.chr19_GL949747v2_alt 314270 40 + 729520 GGTGCAGTCATGTGAGAATCTTGAAGGTGCCCATGAAGGG s panTro4.chr19 59266495 40 + 63644993 GGTGCAgtcatgtgagaatcttgaaggtgcccatgaaggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123681 40 + 60714840 GGTGCAGCCATGGGAGAATCTTGAAGCTGCCCATGAAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886254 40 - 106955855 GGTGCAGCCATGGGAGAATcttgaagctgcccatgaaggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145925 40 + 64156825 GGTGCAgtcatgtgagaatcttgaagctgcccatgaaggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233383 40 + 59248254 GGTGCAGTCATGTGAGAATCTTGAAGCTGCCCATGAAGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47340389 40 + 51301725 GGTGCAGTCATGTGAGAATCTTGAAGCTGCCCATGAAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022973 40 + 50890351 GGTGCAGTCATGTGAGAATCTTGAAGCTGCCCATGAAGGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102774580 39 + 122678785 ggtgcactcacatgacta-cttgatgttggacatgataga i canFam3.chr1 I 11036 C 0 e calJac3.chr22 45562942 4986 + 49145316 T a score=389244.000000 s hg38.chr19_GL949747v2_alt 314310 130 + 729520 AGTGTTTATACCACAGTCATCAACAAATTCCACAA---ATAAATGCTTTTTAGAAAACTTTTTTGTTGTTGTTCAGGAAGCCAGTCTATGCGCACAACAGCAGGCTTTTCCATCAAACACTTCTCTTTTGATT s panTro4.chr19 59266535 130 + 63644993 agtgtttataccacagtcatcaacaaattccacaa---ataaatgctttttAGAAAACTTTTTTGTTGTTGTTCAGGAAGCCAGTCTATGCGCACAACAGCAGACTTTTCCATCAAACACTTCTCTTTTGATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123721 127 + 60714840 AGTGTTTATACCACAGTCATCAACAAATTCCACAA---ATAAATGCTTTTTAGAAAACTTTT---TTGTGGTTCACGAAGCCAATCTATGGGCACAACAGCAGGCTTTCCCATCAAACACTTCTCTTTTGATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886294 130 - 106955855 agtgtttatgccacagtcatcaacaaattccacaa---ataaatgctttttAGAAAACTTTTTTGTTGTTGTTCAGGAAGCCAGTCTGTGGGCACAACAGCAGGCTTTTCCATCAAACACTTCTCTTTTGATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145965 130 + 64156825 agtgtttataccacagtcatcaacaaattccacaa---ataaatgctttttAGAAAACGTTTTTGTTGTCGTTCAGGAAGCCAGTCTATGGGCACAACAGCAGGCTTTTCCATCAGACACCTCTCTTTTGATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233423 130 + 59248254 AGTGTTTATACCACAGTCATCAACAAATTCCACAA---ATAAATGCTTTTTAGAAAACGTTTTTGTTGTCGTTCAGGAAGCCAGTCTATGGGCACAACAGCAGGCTTTTCCATCAGACACCTCTCTTTTGATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47340429 130 + 51301725 AGCGTTTATACCACAGTCATCAACAAATTCcacaa---ataaatgctttttagAAAACGTTTTTGTCATCGTTCAGGAAGCCAGTCTATGGGCACAACAGCAGGCTTTTCCATCAGACACCTCTCTTTTGATT i papAnu2.chr19 C 0 I 307 s chlSab2.chr6 47023013 130 + 50890351 AGCGTTTATACCACAGTCATTAACAAACTCCACAA---ATAGATGCTTTTTAGAAAACGTTTTTGTCGTTGTTCAGGAAGCCAGTCTATGGGCACAACAGCAGGCTTTTCCATCAGACACCTCTCTTTTGATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45557956 132 + 49145316 agtgcttagattacagtcatgagccactgtgccAAAGCATAAATGCTTTTTAGAAAACCTTTTTTTTGTTGTTCAGGAAGCCAGTTTA-GGGCACAACTGCAGGCTTTTCCATCAAACACCTCTGTTTTGATT i calJac3.chr22 T 4986 C 0 s canFam3.chr1 102774619 121 + 122678785 agtgtttataccaaagaaatgggctaatgtcatga---atGACAGTTGTTTAAAAACAATTA--------ATTCTTAGAGCCTGTGTAGCAGCTCACAACCAGGCTGTCACTTCAAACACCTCTGAGTCACT- i canFam3.chr1 C 0 C 0 a score=491252.000000 s hg38.chr19_GL949747v2_alt 314440 170 + 729520 CCTAGTGACTGTATCTCTGGAGA------AACTACAGAT-----------------GAAGAGTGAC----------------------AGGTGGTACAGCATCACTTTGAACTTAGATTTTCCAAACACGAATCTGATTTTTGCCC-ATGGATTTAATTA-TC-AAAAGCAAATTCCATGTTATGAGCTGAAGAGATAGTCCC--AGTAATACACATTAG s panTro4.chr19 59266665 170 + 63644993 CCTAGTGACTGTATTTCTGGAGA------AACTACAGAT-----------------GAAGAGTGAC----------------------AGGTGGTACAGCATCACTTTGAAATTAAATTTTCCAAACACGAATCTGATTTTTGCCC-ATGGATTTAATTA-TC-AAAAGCAAATTCCATGTTATGAGCTGAAGAGATAGTCCC--AGTAATACACATTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123848 170 + 60714840 CCTAGTGACCGTATTTCTGAAGA------AACTACAGAT-----------------GAAGAGTGGC----------------------AGGTGATAAGGCATCACTTTGAACTTAAATTTTCCAAACACGAATCTGATTTTTGCCC-GTGGATTTAATTC-TC-AAAAGCAAATTCCATGTTATGAGCTGAAGAGATAGACCC--AGTAATACACATTAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886424 170 - 106955855 CCTAGTGACCGTATTTCTGGAGA------AACTACAGAT-----------------GAAGAGTGAC----------------------AGTTGGTACAGTATCACTTTGAACTTAAATTTTCCAAACACGAATCTGATTTTTGCCC-ACGGATTTAATTA-TC-AAAAGCAAATTCCATGTTATGAGCTGAAGAGATAGTCCC--AGTAATACACATCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60146095 170 + 64156825 CCTAGTGACTGTATTTCTAGAGA------AACAACAGAT-----------------GGAGAGTGAC----------------------AGGTGGTAGGGCATCACTTTGAACTTAAATTTTGCAAATGCAAATCTGATTTTTGCAC-ATGGATTTAATTA-TC-AAAAGCAAATTCCATGTTATGAGCTGAAAAGATAGTCCC--AGTAATACACATCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233553 170 + 59248254 CCTAGTGACTGTATTTCTAGAGA------AACAACAGAT-----------------GGAGAGTGAC----------------------AGGTGGTAGGGCATCACTTTGAACTTAAATTTTGCAAATGCAAATCTGATTTTTGCAC-ATGGATTTAATTA-TC-AAAAGCAAATTCCATGTTATGAGCAGAAAAGATAGTCCC--AGTAATACACATCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47340866 170 + 51301725 cctagtgacTGTATTTCTAGAGA------AACAAAAGAT-----------------GGAGAGTGAC----------------------AGGTGGTAGGGCATCACTTTGAACTTAAATTTTGCAAATGCAaatctgatttttgcac-atggatttaATTA-TC-AAAAGCAAATTCCATGTTATGAGCTGAAAAGATAGTCCC--AGTAATACACATCAG i papAnu2.chr19 I 307 C 0 s chlSab2.chr6 47023143 170 + 50890351 CCTAGTGACTGTATTTCTAGGGA------AACTACAGAT-----------------GAAGAGTGAC----------------------AGGTGGTAGGGCATCACTTTGAACTTAAATTTTGCAAATGCAAATCTGATTTTTGTAC-ATGGATTTCATTA-TC-AAAAGCAAATTCCATGTTATGAGCTGAAGAGATAGTCCC--AGTAATACACATCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45558088 171 + 49145316 CCTAGTGACCATATTTCTGGAGA------AACTACAGAG-----------------GAAAAGTGAC----------------------AAGTGGTAGGGCATCATTTTGGACTTAAATTTTCCAAACATGAATCTGATTTTTGCCC-ATGCATTTAATTA-TCAAAAAGCAAATGTCATGT--TGAGCTGAAAAGATAGTCCCAAAGTAATACACATCAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 102774740 195 + 122678785 CAAACTGAAAGTATTTCTCAAAAACTCTTAAAAACAGGTTCCTTTGGATGAGTAGAGAAGAGCAATATGAGTTTAGAAAGGGCTTAGGAGATGGTATTCCATCACCT----------GTTTCCAG--GTAGACCCTATTTTCATCCGATCCATTTAGTTATTC-AAAAACAGATTCTGTGTTCCTAGTAAAA----------T--AGAAGTATACTTCCA i canFam3.chr1 C 0 n 0 a score=2841355.000000 s hg38.chr19_GL949747v2_alt 314610 866 + 729520 AAAATGCAGTAGTTAGAAATAAAGAAAGGTGTATTACCTGAAAGTGGAGCAGAGCATGAGGTCACAG--AGGGGCGGACCCAAACCCACCATAGGGGTGAAGCCTTACATCATAGGG-AAGAAAAACGAAGGAAGGGGCAGTCAAGGAGAGTCGACAATG--AGGAGGAA-AGCACCACAGTTTAATGGAGGAAGCATCTTCTACAGACA----CCCAGACATCTTCCTGCACCTGACCCATGCTTCTTCCCCTTGATATTCTCAGCAGACA-CTTCCCCAACTGCTGCCCCAG----TCTTCCAGAACCTCCTCAGATCATCAGATCTGTTCCCAAGGCTCCACCACTCTGAAGGGTGCATTGTCCTTTCTGCTGTTTGCCTCCTGGCTGCACCTTGGGGGGCTTCTCTGGCTGTGCTGAGCCTCAAATAACAGAATCCCGAGGAACAGCAGGACCAAGCCAGCCACACCCATGCGGATGAGATTCTCCACTG----TGTAATCCTGGAGGTGTGGGGCTAGGGATGGTGGACAAAGAGGTCACAGAGGTCAGGGCAGATCACAATTACCAAAGACCCCTGGATGTCCACCCAGGGTAC---CCACCTCCCCTTGAC----AGGACCTGACCCTCTGTGCCCAGCCCCATAACTGGGAGAATCTCCTCACTCACCAGTCTTGGAATCTGACTTCTTTTGTGCTGGATTGAGGGTCTCAGTTGCTCCTAAG----AATCAAAGAATAAGGATGTTGGTGAGAAGCTGAAGAGCC--------TCTCCCCTGGGCAATGCATTCTTATATTCCTCCACCTCTCATGGTGTGACT-TTATGTAGATCCTTAGTGAACACATTCTCTGCTCTCACAGGCCTCCCCTGGTAC-GTCATTGGGT-TTTTCAA s panTro4.chr19 59266835 866 + 63644993 AAAATGCAGTAGTTAGAAATAAAGAAAGATGTATTACCTGAAAGTGGAGCAGAGCATGAGGTCACAG--AGGGGCAGACCCAAACCCACCATAGGGGTGAAGCCTTACATCATAGGG-AAGAAAAACGAAGGAAGGGGCAGTCAAGGAGAGTCGACAATG--AGGAGGAA-AGCACCACAGTTTAATGGAGGAAGCATCTTCTACAGACA----CCCAGACATATTCCTGCACCTGACCCATGCTTCTTCCCCTTGATATTCTCAGCAGACA-CTTCCCCAACTGCTGCCCCAG----TCTTCCAGAACCTTCTGAGATCATCAGATCTGTTCCCAAGGCTCCACCACTCTGAAGGGTGCATTGTCCTTTCTGCTGTTTGCCTCCTGGCTGCACCTTGGGGGGCTTCTATGGCTGTGCTGAGCCTCAAATAACAGAATCCCGAGGAACAGCAGGACCAAGCCAGCCACACCCATGCGGATGAGATTCTCCACTG----TGTAATCCTGGAGGTGTGGGGCTAGGGATGGTGGACAAAGAGGTCACAGAGGTCAGGGCAGATCACAATTACCAAAGACCCCTGGATGTCCACCCAGGGTAC---CCACCTCCCCTTGAC----AGGACCTGACCCTCTGTGCCCAGCCCCATAACTGGGAGCATCTCCTCACTCACCAGTCTTGGAATCTGACTTCTTTTGTGCTGGATTGAGGGTCTCAGTTGCTCCTAAG----AATCAAAGAATAAGGATGTTGGTGAGAAGCTGAAGAGCC--------TCTCCCCTGGGCAATGCATTCTTATATTCCTCCACCTCTCATGGCATGACT-TTATGTAGATCCTTAGTGAACACATTCTCTGCTCTCACAGGCCTCCCCTGGTAC-GTCATTGGGT-TTTTCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56124018 866 + 60714840 AAAATGCAGTAGTTAGAAATAAAGAAAGATGTATTACCTGAAAGTGGAGCAGAGCATGAGGTCACAG--AGGGGCGGACCCAAACCCACCATAGGGGTGAAGCCTTACTTCATAGGG-AAGAAAAACGAAGGGAGGGGCAGTCAAGGAGAGTTGACAATG--AGGAGGAA-AGCACCACAGTTTAAGGGAGGAAGCATCTTCTACAGACA----CCCAGACATCTTCCTGCACCTGACCCATGCTTCTTCCCCTTGATAATCTCAGCAGACA-CTTCCCCAACTGCTGCCCCAG----TCTTCCAGAACTTTCTGAGATCATCAGATCTGTTCCCAGGGCTCCACCACTCTGAAGGGTGCATTGTCCTCTCTGCTGTTTGCCTCCTGGCTGCACCTTGGGGGGCTTCTCTGGCTGTGATGAGCCTCAAATAACAGAATCCCAAGGAACACCAGGACCAAGCCAGCCAAGCCCATGCGGATGAGATTCTCCACTG----TGTAATCTTGGGGGTGTGAGGCTGGGGATGGTGTACAAAGAGGTCACAGAGGTCAGGGCAGATCACAATTACCCAGGACCCCTGGATGTCCACCCAGGGTAC---CCACCTCCCCTTGAC----AGGACCTGACCCTCTGTGCCCAGCCCCACAAGTGGGAGCATCTCCTCACGCACCAGTCTTGGAATCTGACTTCTTTTGTGCTGGATTGAGGGTCTCAGTTGCTCCTAAG----AATCAAAGAATAAGGATGTTGGTGAGAAGCTGAAGAGCC--------TCTCCCCTGGGCAATGCATTCTTATATTCTTCCATCTCTCATGGAGTGACT-TTATGTAGATCCTTAGTGAACACATTCTCTGCTCTTGCAGGCCTCCCCTGGTAT-GTCATTGGGT-TTTTCAA i ponAbe2.chr19 C 0 I 117 s nomLeu3.chr10 102886594 866 - 106955855 AAAATGCAGTAGTTAGAAATAAAGAAAGATGTATTACCTGAAAGTGGAGCAGAGCAGGAGGTCACAG--AGGGGTGGACCCAAACCCACCATAGGGGTGAAGCCTTACATCATAGGG-AAGAAAAATGAAGGGAGGGGCAGTCAAGGAGAGTCAACAATG--AGGAGGAA-AGCACCACAGTTTAATGGAGGAGGCATCTTCTACAGACA----CCCGGACATCTTCCTGCACCTGACCCATGCTTCTTCCCCTTGATATTCTCAGCAGACA-CTTCCCCAACTGCCGCCCCAG----TCTTCCAGGACTTTCTGAGATCATTAGATCTGTTCCCAGGGCTCCACCACTCTGAAGGGTGCATTGTCCTCTCTGCTGTTTGCCTCCTGGCTGCACCTTGGGGGCCTTCTCTGGCTGTGCTGAGCCTCAAATAACAGAATCCCGAGGAACACCAGGACCAAGCCAGCCAAGCCCATGCGGATGAGATTCTCCACTG----TGTAATCCTGGAGGTGTGGGGCTAGGGATGGTGAACAAAGAGGTCACAGAGGTCAGGGCAGATCACAATTACTCAGGACCCCTGGATGTCCACCCAGGGCAC---CCTCCTCCCCTTGAC----AGGACCTGACCTTCTGTGCCAAGCCCCATAACTGGGAGCATCTCCTCACTCACCAGTCTTGGAATCTGACTTCTTTTGTGCTGGATTGAGGGTCTCAGTGGCTCCTAAG----GATCAAAGAACAAGGATGTTGGTGAGAAGCTGAAGAGCC--------CGTCCCCTGGGCTCTGCATTCTTATATTCCTCCATCTCTCATGGCGTGACT-TTATGTAGATCCTTAGTGAACACATTCTCTGCTCTCACAGGCCTCCCCTGGTAC-ATCATGGGGT-TTTTCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60146265 866 + 64156825 AAAATGCACTAGCTAGAAATAAAGAAAGATGTATTACCTGAAAGTGGAGCAGAGCATGAGGTCACAG--AGGAGTGGACCCAAACTCACCATAGGGGCAAAGCCTTACATCATAGGG-AAGAAAAAGGAAGGGAGGGGCAGTCAAGGAGAGTCAACAATG--AGGAGGAA-AGCACCACAGTTTAATGGAGGAAGCATCTTCTACAGACA----CCCAGACACCTTCCTGCACCTGACCCATGCTGCTTCCCCTTGATATTCTCAGCAGACA-CTTCCCCAACTGCTGCCCCAG----TCTTGCAGAACCTCCTGGGATCATCAGATCTGTTCCCAGGGCTCCACCACTCTGAAGGGTGCATTGTCTTCTCTGCTGTTCACCTCCTGGCTGCACCTTGTGGGGCTTCTCTGGCTCTGCTGAGCCTCAAATAACAGAATCCCAAGGAACACCAGGACCAAGCCAGCTATACCCATGCGGATGAGATTCTCCACTG----TGTAATCCTGGAGGTGTGGGGCTAGGGATGGTGGACAAAGAGGTCACAGAGGTCAGGGCAGATCATGATTACCCAGGACCCCTGGATGTCCACCCAGGGTAC---CCACCTCCCCTTGAC----AGGACCTGACCCTCTGTGCCCAGTCCCATAACTGGGAGCATCTCCTCACTCACCAGTCTTGGAATCTGACTTATTTTGTGCTGGATTGAGGGTCTCAGTTGCTTCTAAA----AATCAAAGAACAAGGATGTTGGCAAGAGGCTGAAGAGCC--------TCTCCCCTGGGCTCTGCTTTCTTATATTCCTCCATCTCTCATGGTGTGGCT-TTATGTAGATCCTTAGTGAACACATTCTCTGCTCTAGCAGGCCTCCCCTGGTAT-GTCATTGGGG-TTTTCAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233723 866 + 59248254 AAAATGCACTAGCTAGAAATAAAGAAAGATGTATTACCTGAAAGTGGAGCAGAGTATGAGGTCACAG--TGGGGCGGACCCAAACTCACCATAGGGGCAAAGCCTTCCATCATAGGG-AAGAAAAAGGAAGGGAGGGGCAGTCAAAGAGAGTCAACAATG--AGGAGGAA-AGCACCACAGTTTAATGGAGGAAGCATCTTCTACAGACA----CCCAGACACCTTCCTGCACCTGACCCATGCTGCTTCCCCTTGATATTCTCAGCAGACA-CTTCCCCAACTGCTGCCCCAG----TCTTTCAGAACCTCCTGGGATCATCAGATCTGTTCCCAGGGCTCCACCACTCTGAAGGGTGCATTGTCTTCTCTGCTGTTCACCTCCTGGCTGCACCTTGTGGGGCTTCTCTGGCTCTGCTGAGCCTCAAATAACAGAATCCCAAGGAACACCAGGACCAAGCCAGCTATACCCATGCGGATGAGATTCTCCACTG----TGTAATCCTGGAGGTGTGGGGCTAGGGATGGTGGACAAAGAGGTCACAGAGGTCAGGGCAGATCATGATTACCCAGGACCCCTGGATGTCCACCCAGGGTAC---CCACCTCCCCTTGAC----AGGACCTGACCCTCTGTGCCCAGCCCCATAACTGGGAGCATCTCCTCACTCACCAGTCTTGGAATCTGACTTATTTTGTGCTGGATTGAGGGTCTCAGTTGCTTCTAAA----AATCAAAGAACAAGGATGTTGGCGAGAAGCTGAAGAGCC--------TCTCCCCCAGGCTCTGCTTTCTTATATTCCTCCATCTCTCATGGTGTGGCT-TTATGTAGATCCTTAGTGAACACATTCTCTGCTCTAGCAGGCCTCCCCTGTTAT-GTCATTGGGG-TTTTCAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47341036 865 + 51301725 AAAATGCACTAGCTAGAAATAAAGAAAGATGTATTACCTGAAAGTGGAGCAGAGTATGAGGTCACAG--TGGGGCAGACCCAAACTCACCACAGGGGCAAAGCCTTACATcataggg-aagaaaaaggaagggaggggcagTCAAGGAGAGTCAACAATG--AGGAGGAA-AGCACCACAGTTTAATGGAGGAAGCATCTTCTACAGACA----CCCAGACACCTTCCTGCACCTGACCCATGCTTCTTCCCCTTGATATTCTCAGCAGACA-CTTCCCCAACTGCTGCCCCAG----TCTTGCAGAACCTCCTGGGATCATCAGATCTGTTCCCAGGGCTCCACCACTCTGAAGGGTGCATTGTCTTCTCTGCTGTTCACCTCCTGGCTGCACCTTGTGGGGCTTCTCTGACTCTGCTGAGCCTC-AATAACAGAATCCCAAGGAATACCAGGACCAAGCCAGCCACGCCCATGCGGATGAGATTCTCCACGG----TGTAATCCTGGGGGTGTGAGGCTGGGGATGGTGGACAAAGAAGTCACAGAGGTCAGGGCAGATCATGATTACCCAGGACCCCTGAATGTCCACCCAGGGTAC---CCACCTCCCCTTCAC----AGGACCTGAccctctgtgcccagccccataACTGGGAGCATCTCCTCACTCACCAGTCTTGGAATCTGACTTATTTTGTGCTGGATTGAGGGTCTCAGTTGCTCCTAAA----AATCAAAGAACAAGGATGTTGGTGAGAAGCTGAAGAGCT--------TGTCCCCTGGGCTCTGCTTTCTTATATTCCTCCATCTCTCATGGTGTGGCT-TTATGTAGATCCTTAGTGAACACATTCTCTGCTCTAGCAGGCCTCCCCTGGTAT-GTCATTGGGT-TTTTCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47023313 861 + 50890351 AAAATGCACTAGCTAGAAATACAGAAAGATGTATTACCTGAAAGTGGAGCAGAGCATGAGGTCACAG--TGGGGCGGACCCAAACTCACCATAGGGGCAAAGTCTTCCATCATAAGG-AAGAAAAAGGAAGGGAGGGGCAGTCAAGGAGAGTCAACAATG--AGGAGGAA-AGCATCACAGTTTAATGGAGGAAGCATCTTCTACAGACA----CCCAGACACCTTCCTGCACCTGACCCATGCTTCTTCCCCTTGATATTCTCAGCAGACA-CTTCCCCAACTGCTGCCCCAG----TCTTGCAGAACCTCCTGGGATCATCAGATCTGTTCCCAGGGCTCCACCACTCTGAAGGGTGCATTGTCTTCTCCGCTGTCCACCTCCTGGCTGCACCTTGTGGGGCTTCTCTGGCTCTGCTGAGCCTCAAATAACAGAATCCCAAGGAACACCAGGACCAAGCCAGCTATACCCATGCGGATGAGATTCTCCACTG----TGTAATCCTGGAGGTGTGGGGCTAGGGATGGTGGACAAAGAGGTCACAGAGGTCAGGGCAGATCACAATTACCCAGGACCCCTGGATGTCCACCCAGGGTAC---CCACCTCCCCTTGAC----AG-----GACCCTCTGTGCCCAGCCCCATAACTGGGGGCATCTCCTCACTCACCAGTCTTAGAATCTGACTTATTTTGTGCTGGACTGAGGGTCTCAGTTGCTCCTAAA----AATCAAAGAACAAGGATGTTGGTGAGAAGCTGAAGAGCC--------TCTCCCCTGGGCTCTGCTTTCTTATATTCCTCCATCTCTCGTGGTGTGGCT-TTATGTAGCTCCTTAGTGAACACATTCTCTGCTCTAGCAGGCCTCCCCTGGTAT-GTCATTGGGT-TTTTCAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45558259 843 + 49145316 AAAACGTAGTAGTTAGAAATAATGAAAGATGTATTACCTGAAAGTGGAGCA-------------------------GATCCAAACCTACCATATGGGTGAAGCCTCACATCATAGGGAAAAAAAAAGGAAGGGAGGGGAAGTCAAGGAGAGTTGACAATG--AGGAGGAA-AACACCACAGTTTAGTGGAGGAAGCATCTTCTACAGACA----CTCAGACATCATCCTGCACCTGACCCATGCTTCTTCCCCTCGACATTCTCAGCAGACA-CTTCCTCAGCTGCTGCCCCAG----ACTTCCAGAACCTCCTGGGATCATCAGATCTGTTCCCGAGGCTCTGCCACTCTGAAGCGTGCACTGTC---TCTGCTGTTCACCTCCTGGCTGCATCTTG-GGGGTTTCTCTGCCTGTGCTGAGCCTCAAATAGCAGAATCCCGAGGACCACAAGGATGAAGCCAGCCACGCCTATGCGGATGAGATTCTCCACTG----TGTAATCCTGGAGGTGTGAGGCTGGGGATGGTAGACAAAGAGGCCACAGAGGTCAGGGCAGATCACAATTACCTAGGACCCCTGGATGTCCACCCAGGGCACCCACCACCTCCCCTTGAC----AGGACCTGACCCTCTGTGCCCAGCCCCATAACTGAAAGCATCTCCTCACTCACCAGTCTTGGAATCTGACTTTTTTTGTGGTGGGTTGAGGGTCTCAGCTGCTCCTAAG----AATCAAAGAACAAGGATGTTGGTGAGAAGCTGAAGAGCC--------TCTCCCCTGGGTTCTGCATTCTTACATTCCTCTGTCTCTTGTGTCGTGACT-TTATGTAGATCCTTAGTGAACACAATCTCTGCTCTAGCAGGCCTTCCCTCGTAC-CTCATTGGGT-TCTTCAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19738493 871 - 122678785 AAAGCTCAGCAGGTAGAAA---------ATGTATGCCACGAATA-GGACCAGAAGCTGCTGCTATAGGAAGGTATAAACCCAAACCTGCTGTGTGGGCCATACCCT-CATGAAACAG-GCGTGAGGGAAGATGAGGGACAGTCAAGGACATCCAACAATGGCAGGAGGGACAGCATCACACGTCA-TGGAGGATGAGTTCTGGACAGGGAACAGCCCAGATACTTCCTGGCCCCTAAACCATGTTTC--CCTCTCTGTGTTCTCAGCAGACAGCTCAGCTAACAGGAGCTCCATGCTCTCTTCCAGATCCCCCTAGGCACATTACTTTCATGTCCAAAGCTCTGCCACAGGGAAGGGTGGGTT-TGCTCCCTG-TGTTTACCTCCTGGCTGCACC-TGGGGTCCTTCTCTGGCTGTGCTGAGCCTCTAGGAGCAGAATGCCCAGAAGCACCAGGACGAAGGTAGCCATGCCCAAGCGGATGAGATTCTCCACTGTGCATGTAATCCTTGAGGTCAGAGGTTAGGATTAG--GACAGAGAGGTCCCAGAGGTCAGGGTGGGCCCAAATCACCCGGGATCC--AGATGTCCTCCCAGGATAT---CCACCTCTCCCCGACAAGAAGGACTTCACCCTCCACACC-AGCCCGAGAACTGAGACTTTCTCCT-ACTCACCAGTGCTGGGGTCTGACATATTTTGGGGTGGGCTCACAGTGTCAGCTACTCCTGAGGGGAAATGGAAGCACA-------TGGTGAGGAACTGGAGACCCCCATCCAGCCTGCCTTCTTCTCTGTGTTC-TATATCCCTCCACTTGTCATCATCTCGTTCCTCTACAGTTCCTAAACTAGC-CCTTCACTGCACTAGAGGGGTTCGTCTGCTCTCCCCAGTGGATGCCCTCAG i canFam3.chr1 I 5191 C 0 a score=1063174.000000 s hg38.chr19_GL949747v2_alt 315476 350 + 729520 CCTCTCTGTGCTCTGGGAATTCAGATCTTGTGCCTGAGTCACTTTGAAACAAAGTTTACTTGAGCC-CAGGAGCTCAGGATTAGTAAGAAGAATGATCCCCCAACTAGAAAGAATTGAGCTCTTGTGTGCTGTCTTGGATGTGCAATCTTGTGCAACAAGAACACAACAACTAATTCCCCCAGAGACAGAAAT-TTCCATTTTTCAGTGGATGAGGACCCAGTCTCTGTGGATGAGGAGTTGGTCCTCAGTCACTCTTGGAAGTCAGGAGCACAAGCAAGG--GCTGGAGGCTGCAACGGCCCCCACTG-TGTGC-GCCTCAGACAGCTCC---CCTGTGGTTTCATCATCCATTTAAT s panTro4.chr19 59267701 351 + 63644993 CCTCTCTGTGCTCTGGGAATTCAGATCTTGTGCCTGAGTCACTTTGAAACAAAGTTTACTTGAGCC-CAGGAGCTCAGGATTAGTAAGAAGAATGATCCCCCAACTAGAAAGAATTGAGCTCTTGTGTGCTGTCTTGGATGTGCAATCTTGTGCAACAAGAACACAACAACTAATTCCCCCAGAGACAGAAAT-TTCCATTTTTCAGTGGATGAGGACCCAGTCTCTGTGGATGAGGAGTTGGTCCTCAGCCACTCTTAGAAGTCAGGAGCACAAGCAAGG--GCTGGAGGCTGCAACGGCCCCCACTG-TGTGCTGCCTCAGACAGCTCC---CCTGTGGTTTCATCATCCATTTAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56125001 346 + 60714840 CCTCTCTGTGCTCTGGGAATTCAGATCTTGTGTCTGAGTCACTTTAGAACAAAGTTTACTTGAGCC-CAAGAGCTCAGGATT-GTGAGAAGAATGATCTCCCAACTAGAAAGAATTGAGCTCTTGTGTGCTGTCTTGGATGCGCAATCTTGTGCAACAAGAACACAACAACTAATTCCCCCAGAGATAGAAAT-TTCCATTTTTCAGTGGATGAGGACCCAGTGTCTGTGGATGAGGAGTTGGTCCTCAGCCACTCTTGGAAGTCAGGAGCA----CAAGG--GCTGGAGGCTGCAATGGCCCCCCCTG-TGTGCTGCCTCAGACAGCTCC---CCTGCAGTTTCATCATCCATTTAAT i ponAbe2.chr19 I 117 C 0 s nomLeu3.chr10 102887460 346 - 106955855 CCTCTCTGTGCTCTGAGAATTCAGATCTTGTGCCTGAGTCACTTTGGAACAAAGTTTACTTGTGCC-CAAGAGCTCAGGATTAGTGAGAAGAATGACCTCCCAACTAGAAAGAATTGGGCTCTTGTGTGCTGTCTTGGATGTGCAATCTCGTGCAACAAGAACACAACAGCTAATTCCCCCAGAGATAGAAAT-GTCCATTTTTCAGTGGACGAGGACCCAGTCTCTGTGGATGAGGAGTTGGTCCTCAGCCACTCTT-GAAGTCAGGAGCA----CAAGG--GCTGGAGGCTGCAATGGCCCCCGCTG-TGTGCTGCTTCAGACAGCTCC---CCTGCGGTTTCATCATCCGTTTAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60147131 347 + 64156825 CCTCTCTCTGCTCTGGGAATTCAGATCTTGTGTCTGAGTCACTTTGGAACAACGTTTCCTTGAGCC-CAAGAGCTCAGGACTAGTGAGAAGAATGATCTCCCAACTAGAAAGAATTGAGCTCTTGTGTGCTGTCTTGGATGTGCAATCTTGTGCAACAAGAACATAAAAACTAATTCCCCCAGAGACAGAAAT-TTCCATTTTTCAGTGGATGAGGACCCAGTCTCTGTGGATGAGGAGTTGGTCCTCGGTAGCTCTTGAAAGTCAGGAGTA----CAAGG--ACTGAAGGCTGTGATGGCCCCCGCTG-CGTGCTGCCTCAGCCAGCTCC---CCTGCGGTTTCATCATTCGTTTACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55234589 347 + 59248254 CCTCTCTCTGCTCTGGGAATTCAGATCTTGTGTCTGAGTCACTTTGGAACAACGTTTCCTTGAGCC-CAAGAGCTCAGGACTAGTGAGAAGAATGATCTCCCAACTAGAAAGAATTGAACTCTTGTGTGCTGTCTTGGATGTGCAATCTTGTGCAACAAGAACATAAAAACTAATTCCCCCAGAGACAGAAAT-TTCCATTTTTCAGTGGATGAGGACCCAGTCTCTGTAGATGAGGAGTTGGTCCTCGGTAGCTCTTGAAAGTCAGGAGTA----CAAGG--ACTGAAGGCTGCGATGGCCCCCGCTG-CGTGCTGCCTCAGCCAGCTCC---CCTGCGGTTTCATCATTCGTTTACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47341901 347 + 51301725 CCTCTCTCTGCTCTGGGAATTCAGATCTTGTGTCTGAGTCACTTTGGAACAACGtttccttgagcc-caagagctcagGACTAGTGAGAAGAATGATCTCCCAACTAGAAAGAATTGAGCTCTTGTGTGCTGTCTTGGATGTGCAATCTTGtgcaacaaaaacacaaaaactaattCCCCCAGAGatagaaat-ttccatttttcagtGGATGAGGACCCAGTCTCTGTGGATGAGGAGTTGGTCCTCAGTGGCTCTTGAAAGTCCGGAGTA----CAAGG--ACTGAAGGCTGCGATGGCCCCCGCTG-CGTGCTGCCTCAGCCAGCTCC---CCTGCAGTTTCATCATTCATTTACT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47024174 347 + 50890351 CCTCTCTGTGCTCTGGGAATTCAGATCTTGTGTCTGAGTCACTTTGGAACAACGTTTACTTGAGCC-CAAGAGCTCAGGACTAGTGAGAAGAATGATCTCCCAACTAGAAAGAATTGAGCTCTTGTGTGCTGTCTTGGATGTGCAATCTTGTGCAACAAGAACACAAAAACTAATTCCCCCAGAGACAGAAAT-TTCCATTTTTCAGTGGATGAGGACCCAGTCTCTGTGGATGAGGAGTTGGTCCTCAGTGGCTCTTGAAAGTCAGGAGTA----CAAGG--ACTGAAGGCTGCGATGGCCCCCGCTG-CGTGCTGCCTCAGCCAGCTCC---CCCGCTTTTTCATCATTCGTTTACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45559102 344 + 49145316 CCTCTCTGTGCTCTGGGAATTCAGATCTTGTGTCTGAGTCACTTTGGAATAAAGTTTACTTGAGCC-CAAGAGCTCAAGATTAGTGAGAAGAATGATCTCCCAACTAGAAAGAATTGAGCTCTTAAGTGCTGTCTTAGATGTGTAATCTTGTGCAACAGGAACACAACA---AATTCCCCCAGAGATAGAAGT-TTCCATTTTTCAGTGGATGAGGACCCAGGCTCCGTGGACAAGGAGCTGGTCCTCAGCTGCTCTTGAAAGTCAGGAGCA----GGAGG--GCTGAGGGCTGCCACTGCCTCTGCTT-CGTGCTGCCTCAGCCAGCTCC---CCTGGGGTTTCCTTAACCATTTAAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19739364 337 - 122678785 TCTCCTTCTTTTCCTTGATTTCAGACTTGGCTTCTGAGTCAGTCTGG-ATAGATTCTGGCTGTGCCTCAGGTGCTCAGGGTTGCAGAGAACTATAGCCTCCCAAC--ACAGAAATCATGTCCTTGTATGTTTAC-----TGTTCAGTCTGGGACA--TAAGACCTCCTAGCTCACAACCCTGCAGATGAGAGTGCTCAATGATTCAGTAGCCAAGAATCCAGCATCCAAGGAAGAGGCATTGGT-GTCAGGGGCTCCT----GTCAGGAGGA----CAGAGGTGCCAATGTGTGGAGTAGAGTCCCATGTCGTTCCATGTCAACCAGCTCCCTTCCTTTGGGTTCTGCAT---TTTAAT i canFam3.chr1 C 0 I 4108 a score=530971.000000 s hg38.chr19_GL949747v2_alt 315826 185 + 729520 GTCTTGTTAACTAATTCTTCATATAGTTAGGAA--ACCTACAATGTGATATGCTTAAATATGAAAATGTA-TTCTTTTCTAAATGATAATGACTAAGTGGGACAGAAAAACATCATTTCTGCTTTTTTGAAGTATGAACCTAGATTGGAAGGTGAAAAGCAAATATTTAAAAACATACCCGAACTtaa s panTro4.chr19 59268052 186 + 63644993 GTCTTGTTAACAAATTCTTCGTATAGTTAGGAAC-ACCTACAATGTGATATACTTAAATATGAAAATGTA-TTCTTTTCTAAATGATAATGACTAAGTGGGACAGAAAAACATCATTTCTGCTTTTTTGAAGTATGAACCTAGATTGGAAGGTGAAAAGCAAATATTTAAAAACATACCCGAACTTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56125347 186 + 60714840 GTCTTGTTAACTAATTCTTCATATAGGTAGGAAC-ACCTACAATGTGATATACTTAAACATGAAAATGTA-TTTTTTTCTAAATGATAATGACTGAGTGGGACAGGAAAACATCATTTCTGCTTTTTTGAAGTATGAACCTAGATTGGAAGGTGAAAAGCGAATATTTAAAAACATACCTGAACTTaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102887806 186 - 106955855 GTCTTGTTAACTAATTCGTCATATAGTTAGGAAC-GCCTACAATGTGATATACTTAAATATGAAAATGTA-TTTTTTTCTAAATGATAATTACTGAGTGGGACAGAAAAACATCATTTCTGCTTTTTTGAAGTATGAACCTAGATTGGAAGGTGAAAAGCAAATATTTAAAAACATACCCGAACTTAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60147478 185 + 64156825 GTCTTGTTAACTAATTCTTCATACAGTTAGGAAC-ACCAACAATGTGATATACTTAAATATGAAAATGTA-TTGTTTTCTAAATGATAATGACTGAGCGGGACAGAAAAACATCATTTCTGCTTTTTTGAAGTATGAACCTAGATTGGAAGGTG-AAAGCAAATATTTAAAAACATACCCaaacttaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55234936 185 + 59248254 GTCTTGTTAACTAATTCTTCATACAGTTAGGAAC-ACCAACAATGTGATATACTTAAATATGAAAATGTA-TTGTTTTCTAAATGATAATGACTGAGCGGGACAGAAAAACATCATTTCTGCGTTTTTGAAGTATGAACCTAGATTGGAAGGTG-AAAGCAAATATGTAAAAACATACCCAAACTTAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47342248 183 + 51301725 GTCTTGTTAACTAATTCTTCGTATAGTTAGGAAC-ACCAACAATGTGATAtacttaaatatgaaaa--ta-tttttttctaaatgataaTGACTGAGCGGGACAGAAAAACatcatttctgcttttttgaaGTATGAACCTAGATTGGAAGgtg-aaagcaaatatttaaaaacatacccaaacttaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47024521 185 + 50890351 GTCTTGTTAACTAATTCTTCATATAGTTAGGAAC-ACCAACAATGTGATATACTTAAATATGAAAATGTA-TTGTTTTCTAAATGATAATGACTGAGCGGGACAGAAAAACATCATTTCTGCTTTTTTGAAGTATGAACCTAGATTGGAAGGTG-AAAGCAAATATTTAAAAACATACCCGAACTTAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45559446 172 + 49145316 GTCTCGTTAACTGACTCTTCATATAGTTAAGAACTATCTACAATGTGATA----TAAATACAAAAATGTATTTTTTTTCTAAATGATAATG----GGTGGGATAGAAAAACATCATTTCTGCTTTTTTGAAGTATGAACCTAGATTGGAAGGTGAAAAGCAAATATTTAAAAACATACCC-------- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19739701 4108 - 122678785 I a score=6960.000000 s hg38.chr19_GL949747v2_alt 316011 5 + 729520 agtaa s panTro4.chr19 59268238 5 + 63644993 AGTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56125533 5 + 60714840 agtaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102887992 5 - 106955855 AGTAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60147663 5 + 64156825 agtaa i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47024706 5 + 50890351 AGTAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19739701 4108 - 122678785 I e calJac3.chr22 45559618 0 + 49145316 C e papAnu2.chr19 47342431 0 + 51301725 C e macFas5.chr19 55235121 0 + 59248254 C a score=11090.000000 s hg38.chr19_GL949747v2_alt 316016 13 + 729520 aataaaaaataaa s panTro4.chr19 59268243 13 + 63644993 AATAAAAAATAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56125538 13 + 60714840 aataaaaaataaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102887997 13 - 106955855 AATAAAAAATAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60147668 13 + 64156825 aataaaaaataaa i rheMac3.chr19 C 0 I 665 s calJac3.chr22 45559618 2 + 49145316 -----------AA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19739701 4108 - 122678785 I e chlSab2.chr6 47024711 0 + 50890351 C e papAnu2.chr19 47342431 0 + 51301725 C e macFas5.chr19 55235121 0 + 59248254 C a score=203953.000000 s hg38.chr19_GL949747v2_alt 316029 292 + 729520 ggccaggcgcggtggttcacgcctgtaatcccagcactttgggaggctgaggc-gggcggatcac--aaggtcaggagactgagaccatcctggctaacacggtgaaaccccatctctactaaaaatac----aaaaaaaaaaaaaaaaattagcctggcatggtggtgggctcctgtagtcccagctacttgagaggatgaggcaggagaatggcgtgaaccccagaggcggagcttgcagtgagccgagatcgcaccactgcactccagcctgggcgac-agagtgagactccgtctc s panTro4.chr19 59268256 295 + 63644993 ggccaggtgcggtggttcacgcctgtaatcccagcactttgggaggctgaggc-gggcggatcac--aaggtcaggagactgagaccatcctggctaacatggtgaaaccccatctctactaaaaatac-aaaaaaaaaaaaaaaaaaaattagcctggcatggtggtgggctcctgtagtcccagctacttgagaggatgaggcaggagaatggcgtgaaccccggaggtggagcttgcagtgagccgagatcgcaccactgcgctccagcctgggcgac-agagtgagactccgtctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56125551 293 + 60714840 ggccaggcgcagtggctcacgcctgtaatcccagcactttgggaggctgaggcggggcggatcat--gagatcaggagattgagaccatcctggctaacacagtgaaaccccatctctactaaaaatac----aaaaaaaaaaaaaaaaattagcctggcatggtggtgggctcctgtagtcccagctacttgggaggctgaggcaagagaacggcgtgaacccaggaggcggagcttgcagtgagctgagatcgcaccactgcactacagcctgggcgac-agagcgagactccatctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102888010 297 - 106955855 ggccaggcgtggtggctcacgcctgtaatttcagcactttgggaggccgaagcggggcggatcac--gaggtcaggggactgagaccattctggctaacacagtgaaaccccatctttactaaaaatacaaaaaaaaaaaaaaaaaaaaattagcctggcgtggtggtgggctcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggtggagcttgcagcgagctgagatcacaccactgtactccagcctgggtgat-tgacagatacaccatctc i nomLeu3.chr10 C 0 I 108 s calJac3.chr22 45559620 280 + 49145316 ggctgggtgtggtggctcacacctgtcatcctagtactttgggcagctgaggc-aagcagattacctgaggtcaggaactcaagaccagccttacc-atatggagaaaccccatctctactaaaaatac-----------------aaaattaacc-ggcatgatggagcatgcctgtaatcccagctacttgggaggctgagtcaggagaatcacttgaatctgggaggtggaggtttcggtgagccaagatcgtaccactgcactccagcctgggcaacaagagtgaaaccccatcaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 19739701 4108 - 122678785 I e chlSab2.chr6 47024711 0 + 50890351 C e papAnu2.chr19 47342431 0 + 51301725 C e macFas5.chr19 55235121 0 + 59248254 C e rheMac3.chr19 60147681 665 + 64156825 I a score=514.000000 s hg38.chr19_GL949747v2_alt 316321 27 + 729520 -aaaaaaaataa-aat--------------aa-------aataaaataat s panTro4.chr19 59268551 35 + 63644993 -aaaaataataataat--------------aataataataataaaataat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56125844 25 + 60714840 -aaaaaaaataaaaat-----------------------aattaaa-aaa i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45559900 40 + 49145316 aaaaacaaacaaaaaCCCATACCCGAACTTAA-------AGTAAAAT--- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19739701 4108 - 122678785 I e nomLeu3.chr10 102888307 108 - 106955855 I e chlSab2.chr6 47024711 0 + 50890351 C e papAnu2.chr19 47342431 0 + 51301725 C e macFas5.chr19 55235121 0 + 59248254 C e rheMac3.chr19 60147681 665 + 64156825 I a score=36065.000000 s hg38.chr19_GL949747v2_alt 316348 36 + 729520 aataaaaaataaaaacaaataaatatttaaaaatCT s panTro4.chr19 59268586 36 + 63644993 aataataaataaaaacaaataaaTATTTAAAAATCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56125869 36 + 60714840 aataaaaaataaaaacaaataaatatttaaaaatct i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55235121 35 + 59248254 AATAAAAAATAAAAACAAATAAATATTTAAAAAAT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47342431 35 + 51301725 aataaaaaataaaaacaaataaatatttaaaaaat- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47024711 33 + 50890351 AATAAAAAATAAAAACAAATAAATA--TAAAAAAA- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45559940 26 + 49145316 ----AAAAACAATATCAAAAAAACATACCC------ i calJac3.chr22 C 0 C 0 e canFam3.chr1 19739701 4108 - 122678785 I e nomLeu3.chr10 102888307 108 - 106955855 I e rheMac3.chr19 60147681 665 + 64156825 I a score=946442.000000 s hg38.chr19_GL949747v2_alt 316384 455 + 729520 GATG-AAAAATATTAAGCACAGGATTGA--------------------ATACTTGA-ATATATGTTTGTGTCtatatatgtacatagcacatatattcatataaaatatatGTGATTAACATGGTTTATAAAATATATGTGATtaacatgctttgcatttgtgtctctctcaaatctcatgttgaattgtaatccccaatgttggaggagaggcccagtgggaggtgattgg--------------cttccccctggctgctctcatgatagtgagttgtcacgagatcttgttatttaaaagtgggtagcacctcccccttctctgtcttcctcctattccagccatagaagaagttcctgctttccctccgccttctgccatgattgtaagtttcccgaggcctccccagccaggcttcctgtatggcctgtggaaccgtgagttaattaaacctctttcctttataaattacccagtctcaggtaggt s panTro4.chr19 59268622 452 + 63644993 GATG-AAAAATATTAAGCATAGGATTGA--------------------ATACTTGA-atatacgtttgtgtctatatatgtacatagcacatatattcatataaaatatatgtgattaacatggcttataaaatatatgtgattaacatgctttgcatttgtgtctctctcaaatctcatgttgaattgtaatccccagtgttggaggagaggcccagtgggaggtgattgg--------------cttccccctggctgctctcatgatagtgagttgtcacgagatcttgttatttaaaagtgggtagcacctcccccttctctgtcttcctcctattccagccat---agaagttcctgctttccctccgccttctgccatgattgtaagtttcccgaggcctccccagccaggcttcctgtatggcctgtggaaccgtgagttaattaaacctctttcctttataaattacccagtctcaggtaggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56125905 441 + 60714840 gaag-aaaaataTTAAGCATAGGAGTGA--------------------ATACTTGA-atgtatgtttgtgtctatatatgtacatagcacatgtattcg---------------------------tgtaaaatatatgtgattagcatgctttgcatttgtgtctctctcaaatctcctgttggattgtaatccccaatgttggaggagaggcccagtgggaggtgattggcttgtaggagccgacttccccctggctgctctcatgatagtgagttgtcacgagatcttgttatttaaaagtgggtagcacctcccccttctctctcttcctcctattccagccatagaagaagttcctgctttccctccgccttctgtcatgattgtaagtttcccgaggcctccccagccatgcttcccgtatggcctgcggaactgtgagccaattaaacctctttcctttctaaattatccagtctcaggtagg- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102888415 439 - 106955855 GATG-AAAAATATTAAGCATAGGAATGA--------------------ATACTTGA-atatatgtttgtgtctatatatgtacatagcacatgtattca---------------------------tataaaatatatgtgattaacatggtttgcatttgtgtctctctcaaatctcatgttgaattgtaatccccattgttggaggagaggcccagtgggaggtgattggcttgtggggccg--acttcccctggctgctcttgtaatagtgagttgtcatgagatcttgttatttaaaagtgggtagcacctcccccttctctctcttcctcctattccagccatagaagaagttcctgctttccctccgccttctgtcatgatcgtaagtttcccgaggcctccccagccatgcttcctgtatggcctgcggaactgtgagccaattaaacctctttctcttataaattatccagtctcaggtagg- i nomLeu3.chr10 I 108 C 0 s macFas5.chr19 55235156 467 + 59248254 GATG-GAAAATATTAAGCATAGGAATGA--------------------ATACTTGA-ATGTATGTTTGTGTCtatatatgtacatagtacatatattcatataaaatatatgtgattaacatggcttataaaatatatgtgattaacatggtttgcatttgtgtccctttgaaatctcacgttgaattttaatccccagtgtcggaggagaggcccagtgggaggtaactggttcgtgggagccgacttcccccttgctgctctcatgatagtgagttgtcatgagatcttgttatttaaaagtgggcaacacctccccgttctctctcttcctcctattccagcctcagaagacgttcctgctttccctccaccttccgccatgattgt--gtttcctgaggcctccccagccatgcttcctgtatggcctgtggaaccgtgagtcagttaaacctctttcctttataaattacccaatctcaggtaggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47342466 467 + 51301725 gatg-gaaaatatTAAGCATAGGAATGA--------------------ATACTTGA-ATATATGTTTGTGTCTACATATGTACATagtacatatattcatataaaatatatgtgattaaCATGGCTTATGAAATATATGTGATTAACATGGTTTGCATTTGTGTCCCTttgaaatctcatgttgaatcttaatccccagtgttggaggagaggcccagtgggaggtaactggtTCGTGGGAGCCgacttcccccttgctgctctcgtgatagtgagttgtcatgagatcttgttatttaaaagtgggcaacacctccctgttctctctcttcctcctattCCAGCCATAGAAGACGTGCCTGCTTTCCCtccaccttccgccatgattgt--gtttcctgaggcctccccagccatgcttcctgtatggcctgtggaaccatgagtcagttaaacctctttcctttataaattacccaatctcaggtaggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47024744 465 + 50890351 GATG-AAAAATATTAAGCATAGGAATGA--------------------ATACTTGA-ATGTATGTTTGTGTCTATATATGTACATAGTGCATATATTCATATAAAATATATGTGATTAACATGGCTTATAAAATATATGTGATtaacatggtttgcatttgtgtccctttgaaatctcatgttgaattttaatccccagtgttggaggagaggcccagtgggaggtaactggttcgtgggagccgacttcccccttgctgctctcgtgatagtgagttgtcatgagatcttgttatttaaaagtgggcaacacctccctgttctctct----ctcctattccagccatagaagacgttcctgctttccctccaccttccgccatgattgtaagtttcctgaggcctccccagccatgcttcctgtatggcctgtggaaccgtgagtcagttaaacttctttcctttataaattacccaatctcaggtaggT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45559966 455 + 49145316 GATGAAAAAATATTAAGCATAGGAATGAATGAAATATTAAGTATTCCTATGCTTAATACTTATGTGTGTGTCTGTGTAGGTTCATAACACATATATTCA---------------------------TATAAA--ATATGTGATtaacatggtttgcatttgtgtccctcccaaatctcatgttgacttgtaatccccat------aggaggggcccaatgggaggtgattggatcatgggagcggacttcccccttgctgctctcctgatagtgatccgtcacgagatcttgttattt-aaagtgggtagcacctcccccttctctctcttcctcctattccagccatataagatgtgtctgcttcccctccaccttctgtcatgatggaaagcttcccgaggcctccccagccatgcttcctgtatggcctgcagaatcgtgagtcagtgaatcctcattgctttataaattacccagtctcaggtagtt i calJac3.chr22 C 0 C 0 e canFam3.chr1 19739701 4108 - 122678785 I e rheMac3.chr19 60147681 665 + 64156825 I a score=477736.000000 s hg38.chr19_GL949747v2_alt 316839 317 + 729520 t----tttgtttgtttgtttgtttgtttttgagacggagtcttgctctgtcccccaggctggagtgcagtggtgcgatctcagctcactgcagcctctgcctct-gggttccagcgattctcctgcctcagcctccaaggcagttgggatt-caggtacccgccaccatgcccagctaattttt--gtatttttagtagagatagggtttcgccatgttggccaggctggtctttcattcctgacctcaggtgatcggcccacctcggcctcccaaagtgctgggattacaggcgtgagccatcgtgcccggcc--tcaggtagttc s panTro4.chr19 59269074 317 + 63644993 t----tttgtttgtttgtttgtttgtttttgagacggagtgttgctctgtcccccaggctggagtgcagtggtgcgatctcagctcactgcagcctctgcctcc-gggttccagcgattctcctgcctcagcctccaaggcagttgggatt-caggtacccgccaccacgcccagctaattttt--gtatttttagtagagacggggtttcgccatcttggccaggctggtctttcactcctgacctcaggtgatcggcccacctcggcctcccaaagtgctgggattacaggcgtgagccattgtgcccggcc--tcaggtagttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56126346 308 + 60714840 ---------------tgtttgtttgtttttgggacagagtcttgctctgtcccccaggctggagtgcagtggtgcgatctcagctcgctgcagcctctgcctcctgggttccagtgattctcctgcctcagcctccggggtagttgggattacaggcgctcgccaccacacccagctaattttt--gtatttttagtagagacggggtttcgccatgttggccaggctggtctttaactcctgacctcaggtgatccgctcacctcagcctcccaaagtgcggggattacaggcgtgagccatcatgcccggcc--tcaggtagttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102888854 312 - 106955855 -----------tgtgtgtttgtttgtttttgagacagaatcttgctctgtcccccaggctggagtgcagtggtgtgatctcagctcactgcagcctctgcctcccgggttccagtgattctcctgcctcagcctccggggtagttgggattacaggcacccgccgccacgctcagctaattttt--gtatttttagtagagacggggtttcgccatgttggccaggctggtctttcactcctgacctcaggtgatcagcccacctcggcctcccaaagtgctcggattacaggcgtgagccatcgtgcccggcc--tcaggtagttc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55235623 315 + 59248254 t--------tttgtttgtttgtttgtttttgagacagagtctttgtctgtcccccgggctggagagcaatggtgcgatctcagctcgctgcagcctctgcctcccaggttccagagattctcctgcctcagcctcctgggtagttgggattacaggcacctgccaccacgaccagctaattttt--gtatttttagtagagacagggttttgccatgttggccaggctggtctttaactcctgacctcaggtgatccgcctgccttggcctcccaaagtgctgggattacaggtgtgagccatcgtgcccagcc--TCAGGTAGttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47342933 324 + 51301725 ttctgtttgtttgtttgtttgtttgtttttgagactctgcctcactctgtcgcccaggctggagtgcagtggcgcgatctcaggtcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccaagtagctgggactacaggcgcc-accaccacgccgggctaattttttcgtatgtttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctca--tgagccacccgcctcggcctcctaaagtgctgggattacagatgtgagccaccgcgtctggcctatcaggtagttc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47025209 325 + 50890351 Ttttgtttgtttgtttgtttgtttgtttttgagactccgcctcgctctgtcacccaggctggagtgcggtggcgcgatctcaggtcactgcaagctctgcctcccaggttcacaccattctgctgcctcagcctcccaagtagctgggactgcaggcacccgccaccacacccggctaattttttcgtatgtttagtagagacggggttttaccatgttagccaggatggtctcgatctcctgacctca--tgagccacccgcctcggcctcctaaagtgctgggattacaggcgtgagccaccgcgtctggcctatcaggtagttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19739701 4108 - 122678785 I e calJac3.chr22 45560421 0 + 49145316 C e rheMac3.chr19 60147681 665 + 64156825 I a score=7644.000000 s hg38.chr19_GL949747v2_alt 317156 3 + 729520 ttt s panTro4.chr19 59269391 3 + 63644993 ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56126654 3 + 60714840 ttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889166 3 - 106955855 ttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55235938 3 + 59248254 ttt i macFas5.chr19 C 0 I 779 s papAnu2.chr19 47343257 3 + 51301725 ttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47025534 3 + 50890351 ttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45560421 3 + 49145316 ttt i calJac3.chr22 C 0 C 0 e canFam3.chr1 19739701 4108 - 122678785 I e rheMac3.chr19 60147681 665 + 64156825 I a score=55953.000000 s hg38.chr19_GL949747v2_alt 317159 32 + 729520 acagcagtgtgagaacagatgaatacaATGAT s panTro4.chr19 59269394 32 + 63644993 atagcagtgtgagaacagatgaatacaatgat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56126657 32 + 60714840 atagcagtgtgagaacagatgaatacaatgat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889169 32 - 106955855 atagcagtgtgagaacagatgaatacaatgat i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47343260 32 + 51301725 atagcagtgtgagaacagatgaatacaATGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47025537 32 + 50890351 atagcagtgtgagaacagatgaatacaATGAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45560424 32 + 49145316 ctatcagtgtgagaacagactcatataATGAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19739701 4108 - 122678785 I e macFas5.chr19 55235941 779 + 59248254 I e rheMac3.chr19 60147681 665 + 64156825 I a score=81095.000000 s hg38.chr19_GL949747v2_alt 317191 50 + 729520 TATAGATACATATGTATACGTGGCTTTAGATATTTGTTTTTAAAGTATAT s panTro4.chr19 59269426 50 + 63644993 tatagatacatatgtatatgtggctttagatatttgttttaaaaatatat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56126689 50 + 60714840 tatagatacatatgtatatgtggctttagatatttgttttaaaaatatat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889201 50 - 106955855 tatagatacatatgtatatgtggctttagatatttgttttaaaaatatat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55236720 23 + 59248254 --tatatatatatatatatat-------------------------atat i macFas5.chr19 I 779 I 1 s papAnu2.chr19 47343292 49 + 51301725 Tgtagatacatatgtatatgtggctttagatatttgttttaaaaa-atat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47025569 49 + 50890351 TGTAGATACGTATGTATTTGTGGCTTTAGATATTTGTTTTAAAAA-ATAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45560456 50 + 49145316 TATAGATGCATATGGATATGGGGCTTTAGAGATTTGtttttaaaaaatat i calJac3.chr22 C 0 C 0 e canFam3.chr1 19739701 4108 - 122678785 I e rheMac3.chr19 60147681 665 + 64156825 I a score=253798.000000 s hg38.chr19_GL949747v2_alt 317241 94 + 729520 ATGTAAC--TACGTATATATTCATATTTGAGATGAGAAAGATGGGCTTACAATTTGGAAATATAAACGTGAAATTTCCAATTTTTTATGGCTGATA s panTro4.chr19 59269476 77 + 63644993 atgtaac--tacatatatattcatatTTGAGGTGAGAAAGATGGGC-----------------AAATGTGAAATTTCCAATTTTTTATGGCTGATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56126739 93 + 60714840 atgtaac--tatatatatattcatatTTGAGGTGAGAAAGATGGGCTTACAATTTGGAAATATAAACATGAAA-TTCCAATTTTTTATGGCTGATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889251 94 - 106955855 atgtaac--tacgtatatattcatatCTGAGGTGAGAAAGATGGGCTTATAATTTGGAAATACAAATGTGAAATTTCCAATTTTTTATGGCTGATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60148346 94 + 64156825 atgtaac--tacatatatattcataGTTGAGGTGAGAAAGAGGGGCTTACAATTTGGAAATATAAAAGTGAAATTTCCAGTTTTTTATGGTTGATA i rheMac3.chr19 I 665 C 0 s macFas5.chr19 55236744 94 + 59248254 ATGTAAC--TACATATATATTCATAGTTGAGGTGAGAAAGAGGGGCTTACAATTTGGAAATATAAAAGTGAAATTTCCAGTTTTTTATGGTTGATA i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47343341 94 + 51301725 atgtaac--tacatatatattcatagttGAGGTGAGAAAGAGGGGCTTACAATTTggaaatataaaagtgaaatttcCAGTTTTTTATGGTTGATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47025618 94 + 50890351 ATGTAAC--TACATATATATTCATAGTTAAGGTGAGAAAGAGGGGCTTACAATTTGGAAATATAAAAGTGAAATTTCCAGTTTTTTATGGTTGATA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45560506 96 + 49145316 atgtaactatatatatatattCATATTTGAGATGAAAAAGATGGGCTTACAATTTCGAAACATAAAAGCGAAATTTCTAATTTTTTATGGCTGACA i calJac3.chr22 C 0 I 1693 e canFam3.chr1 19739701 4108 - 122678785 I a score=10192.000000 s hg38.chr19_GL949747v2_alt 317335 4 + 729520 TAAA s panTro4.chr19 59269553 4 + 63644993 TAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56126832 4 + 60714840 TAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889345 4 - 106955855 TAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60148440 4 + 64156825 TAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55236838 4 + 59248254 TAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47343435 4 + 51301725 TAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47025712 4 + 50890351 TAAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19739701 4108 - 122678785 I e calJac3.chr22 45560602 1693 + 49145316 I a score=1025011.000000 s hg38.chr19_GL949747v2_alt 317339 378 + 729520 CATCAGCCCCAGCATCTTCCCCTTGTCCATGTCAGGCCTGGACCCCCGGACCCCAAATCCCGCTCAGGTAGGGGAGGACAGACCTGACTCCTCCACCTATCATTGCTG---------CTCCCTTCTTCCTGCCTGGTTCTAGGACACCTCCCTCCCCTCTGACCACCACAGAGGGAACACCTGCTCCATCCTCAGAGCCCCAGGAAGCCACGTGGACCACGCCCTTATTGTCCACTCTCCCCTCTGTTCCTCTGAGGAACAGACCCCTTTCCTGAATATTGGAGATAAGGTTGAGATGAGTCTAGAATATTATACTGGGTCAGAGTAACTGCGCTTTCATCTCCCACGGGGTCAGGACTTAGAGGCTGGGGACACCCAGATGTTGAT s panTro4.chr19 59269557 378 + 63644993 CATCAGCCCCAGCATCTTCCCCTTGTCCACGTCAGGCCTGGACCCCCGGACCCCAAATCCTGCTCAGGTAGGGGAGGACAGACCTGACTCCTCCACCTATCATTGCTG---------CTCCCTTCTTCCTGCCTGGTTCTAGGACACCTCCCTCCCCTCTGACCACCACAGAGGGAACACCTGCTCCATCCTCAGAGCCCCAGGAAGCCACGTGGACCACGCCCTTATTGTCCACTCTCCCCTCTGTTCCTCTGAGGAACAGACCCCTTTCCTGAATATTGGAGATAAGGTTGAGATGAGTCTAGAATATTATACTGGGTCAGAGTAACTGCGCTTTCATCTCCCACGGGGTCAGGACTTAGAGGTTGGGGACACCCAGACGTTGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56126836 387 + 60714840 CATCAGCCCCAGCATCTTCCCCTTGTCCACGTCCGGCCTGGACCCCCGGACCCCAAATCCTGCTCAGGTAGGGGAGGACAGACCTGGCTCCTCCACCCGTCATCGCTGCTCCCTCCTCTCCCTCCTTCCTGCCTGGTCCTAGGACACCTCCCTCCCCTCTGACCACCACAGAGGGGACACCTGCTCCATCCTTGGAGCCCCAGGAAGCCACGTGGACCACGCCCTTATTGTCCACTCTCCCCTCTGCTCCTCTGGGGAACAGACCCCTTTCCTGAATATTGGAGATAAGGTTGAGACGAGTCTAGAATATTATACTGGGTCAGAGTAACTGCGCTTTCATCTCCCATGGGGTCAGGACTTAGAGGTTGGGGACACCTAGACGTTGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889349 378 - 106955855 CATCAGCCCCAGCATCTTCCCCTTGTCTACGTCAGGCCTGGACCCCCGGACCCCGAATCCTGCTCAGATAGGGGAGGACATTCCTGGCTCCTCCACCTATCATCACAG---------CTCCCTCTTTCCTGCCTGGTCCTAGGACACCTCCCTCCCCTCTGACCACCACAGAGGGAACGCCTGCTCCATCCTTGGAGCCCCAGGAAGCCACATGGACCACACCCTTATTGTCCACTCTCCCCTCTGCTCCTCTGGGGAACAGACCCCTTTCCTGAATATTGGAGATAAGGTTGAGACGAGTCTAGAATATTATACTGGGTGAGAGTAACTGTGCTTTCATCTCCCATGGGGTCAGGACTTACAGGTTGGGGACACCCAGACTTTGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60148444 358 + 64156825 ---CAGCCTCAGCGTCTTCCCCTTGTCCATGTCAGGCCTGGACCCCGGGACCCCAAATCCTGCTCAGATAGAGGAGGACAGACCTAGCTCCTCTGCCCATCATCGCTG---------CTCCCTCCTTCCTGCCTGGTCCTAGGACACCTCCCTCCCCTCTGACCACCACAGAGGGAACACCTGCCCCATCCTCGGGGCCCCAGGAAGCCACGTGGACCATGCCCCTTTTGTCCACTCTCCCCTCTGCT----------------CCCTTTCCTGAATATTGGAGATAAGGTTGAGACGAGTCTAGAATATTATACTGGGTCAGAGTAACTGCGTTTTCATCTCCCATGGGGTCAGGACTTAGAGGTT-GGGACACCCAGACGTTGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55236842 358 + 59248254 ---CAGCCTCAGCGTCTTCCCCTTGTCCATGTCAGGCCTGGACCCCGGGACCCCAAATCCTGCTCAGATAGAGGAGGACAGACCTAGCTCCTCTGCCCATCATCGCTG---------CTCCCTCCTTCCTGCCTGGTCCTAGGACACCTCCCTCCCCTCTGACCACCACAGAGGGAACACCTGCCCCATCCTCGGGGCCCCAGGAAGCCACGTGGACCATGCCCCTTTTGTCCACTCTCCCCTCTGCT----------------CCCTTTCCTGAATATTGGAGATAAGGTTGAGACGAGTCTAGAATATTATACTGGGTCAGAGTAACTGCGTTTTCATCTCCCATGGGGTCAGGACTTAGAGGTT-GGGACACCCAGACGTTGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47343439 376 + 51301725 CATCAGCCTCAGTGTCTTCCCCTTGTCCACGTCAGGCCTGGACCCC-AGACCCCAAATCCTGCTCAGATAGGGGAGGACAGACCTAGCTCTTCTGCCCATCATCGCTG---------ccccctccttcctgcctggTCCTAGGacacctccctcccctctgaCCACCACAGAGGGAACACCTGCCCCATCCTCGGGGCCACAGGAAGCCACGTGGACCATGCCCCTATTGTCCACTCTCCCCTCTGCTCCTCTGGGGAATAGACCCCTTTCCTGAATATTGGAGATAAGGTTGAGACGAGTCTAGAATATTATACTGGGTCAGAGTAACTGCGCTTTCATCTCCCATGGGGTCAGGACTTAGAGGTT-GAGACACCTAGACGTTGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47025716 366 + 50890351 ---CA--------GTCTTCCCCTTGTCCATGTCAGGCCTGGACCCCCGGATCCCAAATCCTGCTCAGATAGGGGAGGACAGACCTAGCTCCTCTGCCCATCATCGCTG---------CTCCCACCTTCCTGCCTGGTCCTAGGACACCTCCCTCCCCTCTGACCACCACAGAGGGAACACCTGCCCCATCCTCGGGGCCCCAGGAAGCCACGTGGACCATGCCCCTATTGTCCACTCTCCCCTCTGCTCCTCTGGGGAACAGACCCCTTTCCTGAATATTGGAGATAAAGTTGAGACGAGTCTAGAATATTATACTGGGTCAGAGTAACTGCGCTTTCATCTCCCATGGGGTCAGGACTTAGAGGTT-GGGACACCCAGACGTTGAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45562295 308 + 49145316 CATCAGCCCCAGCATCTTCCCCTTGTCCAAGTCAGGCCTGGACCCC---------AAACCTGCTCAGGTAGGGGAGGA----CCTGGCTTC---ACCCATCATCACTG---------CTCCCTCCTTCCTGCCTGGTCCCAGGAAACATCCCTCCCCTCTGAGCACCATGGAGGGAACAGCTGCCCCATCCTTGGA--CTCAGGGAGCCATGTGGACCACACCCTTACTGTCCACCTTCCCCTCTGCTCCTCTGGGGAACAGACCCCTTTCCCAAATATTGGAGATAAGATTGAGACAAGTGTAGAATATTATGCTGGGT----------------------------------------------------CACCCAGACATTGAA i calJac3.chr22 I 1693 C 0 e canFam3.chr1 19739701 4108 - 122678785 I a score=474165.000000 s hg38.chr19_GL949747v2_alt 317717 163 + 729520 TCTGAGATGGAGACATCAGGAAGGGAGCAGGTGGGGCCTCCGTCTTCCACCCTCAGTCTAATCTCATCTCCTCCAAGGCTCACCCCCACCTGCTTG--CAGCCCTCTCCACTCTTTAC-CCTACTGAGACTTCAGGGGTGGGAGCCCAGGGTGGGAAGTCCTCATC s panTro4.chr19 59269935 163 + 63644993 TCTGAGATGGAGACATCAGGAAGGGAGCAGGTGGGGCCTCCGTCTTCCACCCTCAGTCTAATCTCATCTCCTCCAAGGCTCACCCCCACCTCCTTG--CAGCCCTCTCCACTCTTTAC-CCTACTGAGACTTCAGGGGTGGGAGCCCAGGGTGGGAAGTCCTCATC i panTro4.chr19 C 0 I 416 s ponAbe2.chr19 56127223 163 + 60714840 TCTGAGATGGAGACATCAGGACGGGAGCAGGTGGGGCCTCCATCTTCCACCCTCAGTCTAATCTCATCTCCTCTAAGGCTCACCTCCACCTCCTTG--CAGCCCTCTCCACTCTTTAC-GCTACTGAGACTTCAGGGGTGGGAGCCCAGGGTGGGAAGTCCTCATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889727 163 - 106955855 TCTGAGATGGAGACATCAGGAGGGGAGCAGGTGGGGCCTCCGTCTTCCACCCTCAGTCTAATCTCATCTCCTCCAAGGCTCACCCACACCTCCTTC--CAGCCCTCTCCACTCTTTAC-CCTGCTGAGACTACAGGGGTGGGAGTCTGGGGTGGGAAGTCCTCATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60148802 163 + 64156825 TCTGAGATGGAGACATCAGGAGCAGAGCGTGTGGAGCCTCCGTCTTCCACCCTCAGTCTAATCTCATCTCCTCCGAGGCTCACCCCCACCTCCTTC--CAGTCCTCTCCACTCTTTAC-CCTACTGAGACTTCAGGGCTGGGAGCCCCGGGTGGGAAGTCCCCATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55237200 163 + 59248254 TCTGAGATGGAGACATCAGGAGCAGAGCGTGTGGGGCCTCCGTCTTCCACCCTCAGTCTAATCTCATCTCCTCCGAGGCTCACTCCCACCTCCTTC--CAGTCCTCTCCACTCTTTAC-CCTACTGAGACTTCAGGGCTGGGAGCCCCGGGTGGGAAGTCCCCATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47343815 163 + 51301725 TCTGAGATGGAGACATCAGGAGGGGAGCGTGTGGGGCCTCCGTCTTCCACCCTCAGTCTAATCTCATCTCCTCTGAGGCTCACCCCCACCTCCTTC--CAGTCCTCTCCACTCTTTAC-CCTACTGAGACTTCAGGGCTGGGAGCCCAGGGTGGGATGTCCCCATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47026082 163 + 50890351 TCTGAGATGGAGACAGCAGGAGGGGAACGTGTGGGGCCTCCGTCTTCCACCCTCAGTCTAATCTCATCTCCTGCGAGGCTCACCCCCACCTCCTTC--CAGTCCTCTCTACTCTTTAC-CCTACTGAGACTTCAGGGCTGGGAGCCCAGGGTGGGAAGTCCCCATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45562603 142 + 49145316 TCTGAGGTGGAGACATCAGGAGGGGAGTGCGTGGGG---------------CTCAGTCTAATCTCATCTCCTCTGAGGTTCA-TCCCATCTCCTCC--CAGCCCTCCCTACTCTTTAC-CCTACTGCAATTTCAGGGGTGGGAGCCAGGGGTGGAAGGTCC----- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19743809 133 - 122678785 TCTGATATGGAGGCACAAACAAAGGTTTGTGGGAGACCTGTGTCT----------ATTCAGGATCATCCTC------GCTCACCCACCTCTCATGCAGCAGC-----CTACTCCTTACTTCTGCTGAGACTGAAGAATGGGGGACCCCAGGTGG------------ i canFam3.chr1 I 4108 C 0 a score=263480.000000 s hg38.chr19_GL949747v2_alt 317880 126 + 729520 TATTTCCACACTCCCATAGGCTGGACCTTCCCCTCGGTGGGAGGTTCCCATGTATTTCCACCCTTCCATGGGCTGGGCCCTCCCCTGTGGACCCTCCCCCTTCACTGTCCTGT-TTTCTTAGTGTCC s panTro4.chr19 59270514 126 + 63644993 TATTTCCACCCTCCCATAGGCTGGACCTTCCCCTCGGTGGGAGGTTCCCATGTATTTCCACCCTTCCATGGGCTGGGCCCTCCCCTGTGGACCCTCCCCCTTCACTGTCCTGT-TTTCTTAGTGTCC i panTro4.chr19 I 416 C 0 s ponAbe2.chr19 56127386 126 + 60714840 TATTTCCACCCTCCCATGGGCTGGACCCTCCCCTGGGTGGGAGGTTCCCGTGTATTTCCACCTTCCCATGGGCTGGGCCCTCCCCTGTGGACCCTCCCCCTTCACTGTCCTGT-TTTCTTAGTGTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889890 74 - 106955855 ----------------------------------------------------TATTTCCACCCTCCCATGGGCTGGACCCTCCCCTGTGGACCCTCACCCTTCACTCTCCTGT-TTTCTTAGTGTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60148965 125 + 64156825 TATTTCCACACTCCCCT-GGCTAGACCTTCCCCTGGGTGGGAGGTTCCTGTGTGTTTCCACCCTCCCATGGGCTGGGCCCTCCCCCGTGGACCCTCCCCCTTCACGCTCCTGT-TTTTCTAGTGTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55237363 125 + 59248254 TATTTCCACACTCCCCT-GGCTAGACCTTCCCCTGGGTGGGAGGTTCCTGTGTATTTCCACCCTCCCATGGGCTGGGACCTCCGCTGTGCACCTTCCCCCTTCACGCTCCTGT-TTTCTTAGTGTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47343978 111 + 51301725 TATTTCCACACTCCCCT-GGCTAGACCTTCCCCTGGGTCAGAGGTTCCTGTGTATTTCCACCCTCCCATGGGCTGGg--------------ccctcccccttcactctcctGT-TTTCCTAGTGTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47026245 125 + 50890351 TATTTCCACACTCCCCT-GGCTAGACCCTCCCCTGGGTGGGAGGTTCCTGTGTATTTCCACCCTCCCATGGGCTGGGCCCTCCCCCGTGGACCCTCCCCCTTCACGCTCCTGT-TTTTCTAGTGTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45562745 78 + 49145316 ------------------------------------------------CATCTATTTCTACCCTCTCATTAGCTGAACCCTCCCCTGTGGACCCTCCCCCTTCACTCCCCTCA-ATCCTTAGTGTCC i calJac3.chr22 C 0 I 3 s canFam3.chr1 19743942 79 - 122678785 -----------------AGGCTGTAGCTT-------------------------TTTCCACTCTCTCCTGGGCTGGACCCTCCTCTGTGGAGCCTCC-----AATGCTCCTACATCTCTTACTGAA- i canFam3.chr1 C 0 C 0 a score=8208.000000 s hg38.chr19_GL949747v2_alt 318006 3 + 729520 TGA s panTro4.chr19 59270640 3 + 63644993 TGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56127512 3 + 60714840 TGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889964 3 - 106955855 TGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60149090 3 + 64156825 TGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55237488 3 + 59248254 TGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47344089 3 + 51301725 TGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47026370 3 + 50890351 TGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19744021 2 - 122678785 -GG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45562823 3 + 49145316 I a score=93605.000000 s hg38.chr19_GL949747v2_alt 318009 28 + 729520 ACTCTCCTGGGG-GCAGGGCCTGAGCTGA s panTro4.chr19 59270643 28 + 63644993 ACTCTCCTGGGG-GCAGGGCCTGAGCTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56127515 28 + 60714840 ACTCTCCTGGGG-GCCGGGCCTGAGCTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889967 28 - 106955855 ACTCTCCTGGGG-GCAGGGCCTGAGCTGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60149093 28 + 64156825 GCTCTCTTGGGG-GCAGGGCCTGCGCTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55237491 28 + 59248254 GCTCTCTTGGGG-GCAGGGCCTGCGCTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47344092 28 + 51301725 GCTCTCTTGGGG-GCAGGGCCTGCACTGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47026373 28 + 50890351 GCTCTCTTGGGG-GCAGGGCCTGCGCTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45562826 28 + 49145316 GCTCTCCTAGGG-GCAGGGCCTGAACTGA i calJac3.chr22 I 3 C 0 s canFam3.chr1 19744023 29 - 122678785 ACTTTCCTGAGATGTGGGTCCTGAGCTGG i canFam3.chr1 C 0 C 0 a score=3600.000000 s hg38.chr19_GL949747v2_alt 318037 1 + 729520 G s panTro4.chr19 59270671 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56127543 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889995 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60149121 1 + 64156825 G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55237519 1 + 59248254 G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47344120 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47026401 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45562854 1 + 49145316 G i calJac3.chr22 C 0 C 0 e canFam3.chr1 19744052 0 - 122678785 C a score=52503.000000 s hg38.chr19_GL949747v2_alt 318038 21 + 729520 AGAGGCTCAGGGCTCACAAAG s panTro4.chr19 59270672 21 + 63644993 AGAGGCTCAGGGCTCACAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56127544 21 + 60714840 AGAGGCTCAGGGCTCAGAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889996 21 - 106955855 AGAGGCTCAGGGCTCAGAGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60149122 21 + 64156825 AGAGGCTCAGGGCTCAGAGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55237520 21 + 59248254 AGAGGCTCAGGGCTCAGAGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47344121 21 + 51301725 AGAGGCTCAGGGCTCAGAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47026402 21 + 50890351 AGAGGCTCAGGGCTCAGAGAG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19744052 0 - 122678785 C e calJac3.chr22 45562855 0 + 49145316 C a score=246394.000000 s hg38.chr19_GL949747v2_alt 318059 91 + 729520 GCCGGGGCTGATGGAGGAAGAAGTGGGG-CAGCAAGTGAGAC---AGACAGACGGACACTCTCTTGGAAGCTCTCCTTTTTCATTTCCAAGAACC s panTro4.chr19 59270693 91 + 63644993 GCCGGGGCTGATGGAGGAAGAAGTGGGA-CAGCAAGTGAGAC---AGACGGGCGGACACTCCCTTGGAAGCTCTCCTTTTTCATTTCCAAGAACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56127565 91 + 60714840 GCCGGGGCTGATGGAGGAAGAAGTGTGG-GGACAAGTGAGAC---AGACGGATGGACACTCCCTTGGAAGCTCTCCTTTTTCATTTCCAAGAACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102890017 91 - 106955855 GCCCGGGCTGATGGAGGAAGAAGTGTGG-GGGCGAGTGAGAC---AGACAGATGGACACTCCCTTGGAACCTCTCCTTTTTCATTTCCAAGAACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60149143 92 + 64156825 GCTGGTGCTGATGGAGGAAGAAGAGGAGTGGGCAAGTGAGAC---AGACGGACGGACATTCCCTTGGAAGCTCTCCTTTTTCATTTCCAAGAACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55237541 92 + 59248254 GCTGGTGCTGATGGAGGAAGAAGAGGAGTGGGCAAGTGAGAC---AAACGGATGGACATTCCCTTGGAAGCTCTCCTTTTTCATTTCCAAGAACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47344142 92 + 51301725 GCTGGTGCtgatggaggaagaagaggagtggGCAAGTGAGAC---AGACGGACGGACATTCCCTTGGAAgctctcctttttcatttccaagAACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47026423 92 + 50890351 GCTGGTGCTGATGGAGGAAGAAGAGGAGTGGGCAAGTGAGAC---AGACGGGCGGACATTCCGTTGAAAGCTCTCCTTTTTCATTTCCAAGAACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3583008 95 - 49145316 GCTGGGGCTGATGGAGGAAGAAGAGATGTGGGCAAGTTGGACGGAGGACAGATGCATGCTCCCTTGGAAGCTCTCATTTTTAATTTCCAAGAGCC i calJac3.chr22 T 39011 n 0 e canFam3.chr1 19744052 0 - 122678785 C a score=7802.000000 s hg38.chr19_GL949747v2_alt 318150 3 + 729520 CCT s panTro4.chr19 59270784 3 + 63644993 CCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56127656 3 + 60714840 CCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102890108 3 - 106955855 CCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60149235 3 + 64156825 TCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55237633 3 + 59248254 TCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47344234 3 + 51301725 TCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47026515 3 + 50890351 TCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45562855 3 + 49145316 CCT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19744052 0 - 122678785 C a score=1657521.000000 s hg38.chr19_GL949747v2_alt 318153 524 + 729520 TTGAGCTCAGAGTGGACAGGGTCAGCG--CCCTCACCTGAGACCACGAGCTCCAGGGGCTCACTGGGGTGAGACAGCAGGTAGGGGTTGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACTCATGGGGAATTCAGCCTGGTACTTATGAGCTCCGTACATTGATCTCAGACGCAACGGGG-----------------------GATGGGCTGCCCCCTCCTTGGTCAGAAGGAAAGTGAACATCGGGTCCCATGACTGACACAGCAGGGTCACCTTCTCTCCTGAGGTCACCGTGGGGCCCGGCTGCACTGAGAGGGAGGGTCTGTCAGAGATCTGTCCTGGAGAAAAGAAGGACGGGTGAGGGGCTGCCCCACCTTGTTCTGAGCTGAGACCTCCCCACCAGTCCTCTCCCTGGGACCCTCAG----TCTGTCTCTGTCTTCTCTGAGTCTCCCCCTCCCCGCCCATCCCCTGTCTCTGTC------------------------------------------------------------------------------------------------TGTCT---CTCCCTCCCTTAGG-ACCCCCACCCCTCATCCCGGCCATCACC s panTro4.chr19 59270787 523 + 63644993 TTGAGCTCAGAGAGGACAGGGTCAGCG--CCCTCACCTGAGACCACAAGCTCCAGGGGCTCACTGGGGTGAGACAGCAGGTAGGGGTTGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACTCATGGGGAATTCAGCCTGGTACTTATGAGCTCTGTAAGTGGATCTTAGATGCAACGGGG-----------------------GATGGGCTGCCCCCTCCTTGGTCAGAAGGAAAGTGAACATCGGGCCCCATGACTGACACAGCAGGGTCACCTTCTCTCCTGAGGTCACTGTGGGGCCCGGCTGCACTGAGAGGGAGGGTCTGTCAGAGATCTGTCCTGGAGAGAAGAAGGATGGGTGAGGGGCTGCCCCACCTTGTTCTGAGCTGAGACCTCCCCACCAGTCCTCTCCCTGGGACCCTCAG----TCTGTCTCTGTCTTCTCTGAGTCTCGCC-TCCCCGCCCATCCCCTGTCTCTGTC------------------------------------------------------------------------------------------------TGTCT---CTTCCTCCCTTGGG-ACCCCCACCCCTCATCCCGGCCATCACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56127659 527 + 60714840 TTGAGCTCAGAGAGGACAGGGTCAGGG--GCCTCACCTGAGACCACGAGCTCCAGGGGCTCACTGGGGTGAGACAGCAGGTAGGGGTTGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCCGAGGTCACAGGACTCATGGGGAATTCAGCCTGGTACTGCTGAGCTCTGTAAGTGGATCTTAGACGCAGCGGGG-----------------------CATCAGCTGCCCCCTCCTTGGTCAGCAGGAAAGTGAACATCGGGCCCCATGACTGACACAGCAGGGTCACCTTCTCTCCTGAGGTCACTGTGGGGCCCAGCTGCACCGAGAGGGAGGGTCTGTCAGAGATCTGTCCTAGAGACAAGAAGGATGGGTGAGGGGCTGCCCCACCTTGTTCTGAGCTGAGACTTCTCCACCAGGCCTCTCTCTGGGACCCTCAGTCTCTCTGTCTCTGTTTTCTCTGAGTCTCCCC-TCCCCGCCCATCCCCTGTCTCTCTC------------------------------------------------------------------------------------------------TGTGT---CTTTCTCCCTTAGG-ACCCTCACCCCTCATCCAGGCCATCACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102890111 617 - 106955855 TTGAACTCAGAGAGGACAGGGTCGGGG--CCCTCACCTGAGACCATGAGCTCCAGGGGCTCACTGGGGTGAGACAGCAGGTAGGGGTTGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCTGCGTGGGCCGAGGTCACAGGACTCATGGGGAATTCAGCCTGGTACTGCTGAGCTCTGTAAGTGGATCTTAGACGCAGTGGGG-----------------------GATGGGCTGCCCCCTCCTTGGTCAGAAGGAAAGTGAACATCGGGCTCCATGACTGACACAGCAGGGTCACCTTCTCTCCTGAGGTCACTGTGGGGCCCAGCTGCACCGAGAGGGAGGGTCTGTCAGGGATCTGTCCTAGAGACAAGAAAGATGGGTGAGGGGCTGCCCCACCTTGTTCTGAGCTGAGACCCCCCCACCAGGCctctctctgggaccctcagtctctctgtctctgttttctctgagtctcccc-tccccgcccatcccctgtctctctctctctctctctctctctctctgtgtatgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt---CTTTCTCCCTTGGG-------ACCCCTCATCCCGGCCATCACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60149238 505 + 64156825 TCGAGCTCAGAGAGGACAGGGTCAGGG---CCTCACCTGAAACCACGAGCTCCAGGGGCTCACTGGAGTGAGACAGCAGGTAGGGGTCGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCCGAGGTCACGGGACTCATGGGGAATTCAGCCTGGTACTGCTGAGCTCTGTAAGTGGATCTTAGACGCAGCGGGG-----------------------GATGGGCTGCCCCCTCCTTGGCCAGAAGGAAAGTGAACATCGGACCCCATGACTGACACAACAGGGTCACCTTCTCTCCTGAGGCCACCGTGGGGCCCAGCTGCACTGAGAGGGAGGGTCTGTCAGGGATCTGTCCTAGAGACAAGAAGGATGGGTGAAGGGTTGCCCCACCTCGTTCTGAGCTGAG---CCACCCCCAGGCCTCTCTCTGGGACCCTCAG-------------------TCTGAGTCTCCCC-TCCCCGCCCATCCCCTGTCTCTGTC------------------------------------------------------------------------------------------------TGTCT---TTCCTTCCCTTGGGAACTCCCCGCCCCCATCCCGGCCATCACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55237636 506 + 59248254 TCGAGCTCAGAGAGGACAGGGTCAGGG--CCCTCACCTGAAACCACGAGCTCCAGGGGCTCACTGGAGTGAGACAGCAGGTAGGGGTCGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCCGAGGTCACGGGACTCATGGGGAATTCAGCCTGGTACTGCTGAGCTCTGTAAGTGGATCTTAGACGCAGCGGGG-----------------------GATGGGCTGCCCCCTCCTTGGCCAGAAGGAAAGTGAACATCGGACCCCATGACTGACACAACAGGGTCACCTTCTCTCCTGAGGCCACCGTGGGGCCCAGCTGCACTGAGAGGGAGGGTCTGTCAGGGATCTGTCCTAGAGACAAGAAGGATGGGTGAAGGGTTGCCCCACCTCGTTCTGAGCTGAG---CCACCCCCAGGCCTCTCTCTGGGACCCTCAG-------------------TCTGAGTCTCCCC-TCCCTGCCCATCCCCTGTCTCTGTC------------------------------------------------------------------------------------------------TGTCT---TTCCTTCCCTTGGGAACTCCCCGCCCCCATCCCGGCCATCACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47344237 505 + 51301725 TCGAGCTCAGAGAGGACAGGGTCAGGG--CCCTCACCTGAAACCACGAGCTCCAGGGGCTCACTGGAGTGAGACAGCAGGTAGGGGTCGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCCAAGGTCACGGGACTCATGGGGAATTCAGCCTGGTACTGCTGAGCTCTGTAAGTGGATCTTAGACGCAGCGGGG-----------------------GATGGGCTGCCCCCTCCTTGGCCAGAAGGAAAGTGAACATCGGACCCCATGACTGACACAGCAGGGTCACCTTCTCTCCtgaggccaccgtggggcccaGCTGCACTGAGAGGGAGGGTCTGTCACGGATCTGTCCTAGAGACAAGAAGAAT-GGTGAAGGGTTGCCCCACCTTGTTCTGAGCTGAG---CCACCCCCAGGCCTCTCTCTGGGACCCTCAG-------------------TCTGAGTctcccc-tccccgcccatcccctgtctctgtc------------------------------------------------------------------------------------------------tgcct---ttccttcccttgggaactccccgcccccATCCCGGCCATCACC i papAnu2.chr19 C 0 M 409 s chlSab2.chr6 47026518 506 + 50890351 TCGAGCTCAGAGAGGACAGGGTCAGGG--CCCTCACCTGAAACCACGAGCTCCAGGGGCTCACTGGAGTGAGACAGCAGGTAGGGTTCGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCCAAGGTCACGGGACTCATGGGGAACTCAGCCTGGTACTGCTGGGCTCTGTAAGTGGATCTTAGACGCAGCGGGG-----------------------GATGGGCTGCCCCCTCCTTGGCCAGAAGGAAAGTGAACATCGGACCCCATGACTGACACAACAGGGTCACCTTCTCTCCTGAGGCCACCGTGGGGCCCAGCTGCACTGAGAGGGAGGGTCTGTCAGGGATCTGTCCTGGAGACAAGAAGGATGGGTGAAGGGCTGCCCCACCTCGTTCTGAGCTGAG---CCACCCCCAGGCCTCTCTCTGGGACCCTCAG-------------------TCTGAGTCTCCCC-TCCCCGCCCATCCCCTGTCTCTGTC------------------------------------------------------------------------------------------------TGTCT---TTCCTTCCCTTGGGAACCCCCTGTCCCCATCCTGGCCATCACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45562858 509 + 49145316 TTGAGCTCAGAGAGGACAGGATCAGGG--CCCTCACCTGAGACCACAAGCTCCAGGGGGTCACTGGGGTGAGACAGCAGGTAGGGGCTGGAGCTGTATGAGCCATAGCACCTGTAGGTCCCTGCATGGGCTGAGGTTACAGGA---ATTTGGAATTCAGCCAAGTACTGTTGAGCTCTGTAAGTGAATCTTAGACGCAGCAGGG-----------------------GATGGGCTACCCCCTCTTTGGTCAGAAGGAAACTGAACATTGGGCTCCGTGACTGACACAGCAGGGTCACATTCTCTCCTGAGGCCACTGTGGGGCCCAGCTGCACTGAGAGGGAGGGTCTCTCAGGGATCTGTCCTGGAGAGAAGAAGGAT-GGTGAGGGGATGCCCCACCTTGTTCTGAGCTGAG---ACCTCCCCAGGCCTCTCTCTGGGACCCTCAG--------TCTCTGTCTTCT----GTCTCCCCCTCCCCGCCCATCCCCTGTCTCTGTC------------------------------------------------------------------------------------------------TCTCC---CTCCCTCCCTTGGG-ACCCCCACCCCTCATCCCAGCCATCACC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19744052 506 - 122678785 TGGAGCTCAGACAGGAAAGGGTGAGGGGGCCCTCACCTGAGACCAGGAGCTCCCAGGGGTCACTGGGATGTGACAATAGCTAAGAGGAGGTGTTGGATGAGCCGTAGTACCTGTAGGTTCCCCCACAGGCTGAGGTCACGGGACTCAGGGAGAATTCAGCCTGGTACAGCCCATCTTGGTAC-----TTTAAAATGCAGTCGGGGGGCTGGGGGTAGTAGTAGGAGAGATAAGCTGCCCCCTCCTTGAACAGAAGGAAAGTGTTCA-CAACCCTCCTGTCTGA-ACCACAGGGTCACATTCTCACCTGGGGCCACCGT-GGGCCCGGCTGCCCCCAGAGGAAGAGTGTGTAGGGGAACTGTCCTAGAGAGAGGAAGGGTGGGTGAGGGGTGGTCCAGCCTTGGCCTGACCTGAG----------------tctgtctgtgtcc------------------------tctgagtctctcc-catct--ccatctcttgtctctctc------------------------------------------------------------------------------------------------tctgtctcCTCCCTCCCTGGGGACCTCACACCCCTGGCCCTGGCCACCATC i canFam3.chr1 C 0 C 0 a score=280315.000000 s hg38.chr19_GL949747v2_alt 318677 99 + 729520 ACCTGGGCT-CCCCCAGCAGG-GCCTGTGCAGAGCCTGGGTCCCCCTGACTGAACCCGCTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCACTGG s panTro4.chr19 59271310 97 + 63644993 ACCTGGGCT-CCCCCAGCAGG-GCCTGTGCAGAGCCTGGGTCCC--TGACTGAACCCGCTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCGCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56128186 97 + 60714840 ACCTGGGCT-CCCCCGGCAGG-ACCTGTGCAGAGCCTGGGTCCC--TGACTGAACCCGCTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCACTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102890728 97 - 106955855 ACCTGGGCT-CCCCTGGCAGG-ACCTGTGCAGAGCCTGGGTCCC--TGACTGAACCCGCTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCACTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60149743 98 + 64156825 ACCTGGGCTCCCCCCGGCAGG-GCCTGTGCAGAGCCTGGGTCCC--TGACTGAACCCGCTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCGCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55238142 98 + 59248254 ACCTGGGCTCCCCCCGGCAGG-GCCTGTGCAGAGCCTGGGTCCC--TGACTGAACCCGCTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCGCTGG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47027024 95 + 50890351 ACCTGGGCT-CCCCCGGCAGG-GCCTGTGCAGAGCCTGGGTGCC--TGAC--AACCCGCTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCGCTGG i chlSab2.chr6 C 0 I 8559 s calJac3.chr22 45563367 97 + 49145316 ATCTGGGCT-CCCCCAGCAGG-GCCTGTACAGAGCCTGGGTCCC--TGACTGAACCTGCTGGGCTCCTCACCTGAGATCAGGACGTCCAGGGGGTCACTGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19744558 96 - 122678785 ACCTGGGAT-TCCCTCACAGGAACCTGTGCAGAGTCTGGGGCCT--TACCTGCACCCAT--GGCCCCTCACCTGCGATCAGGATGTCTAGGGGTTCACTGG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47344742 409 + 51301725 M a score=651779.000000 s hg38.chr19_GL949747v2_alt 318776 234 + 729520 GGGCCGACCACTCGGAGGAGACGTTGTGTGCGCCGTAGCATCTGTACTGGCCCCCGTAGGAGCGGCTCACAGGGCTCAGGGTGAAGTTGGCCTG----GGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGGGGAGGCCATCGGCCCCCTCCTTGTACAGAGTGTATCTGATGTAGCCGACATCAGAGCCACACTGGAGGGTCAGATTCTCTCCGGGGGTCACGACAGGGCCCT s panTro4.chr19 59271407 234 + 63644993 GGGCCGACCACTCGGAGGAGACGTTGTGCGCACCGTAGCATCTGTACTGGCCCCCGTGGGAGCGGCTCACAGGGCCCAGGGTGAAGTTGGCCTG----GGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGGCGAGGCCATCGGCCCCCTCCTTGTACAGAGTGTATCTGATGTAGCCGACATCAGAGCCACACTGGAGGGTCAGATTCTCTCCGGGGGTCACGACAGGGCCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56128283 234 + 60714840 GGGCCGACCACTCGGAGGAGATGTTGTGTGCACCGTAACATCTGTACTGGCCCCCGTGGGAGCCCCTCACAGGGCTCAGGGTGAAGCTGGCCTG----GGAGAGCCCAGCCTGGGGCTGCTGGCCAGGGCGCTGGGGGAGGTCATCGCCCCCCTCCTTGTACAGAGCGTATCTGATGTAGCCAACATCAGAGCCACACTGGAGGGTCAGATTCTCTCCGGGGGTCACGACAGGGCCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102890825 234 - 106955855 GGGCCGACCACTCGGAGGAGACGTTGTGTGCACCGTAGCATCTGTACTGGCCCCCGTGGGAGCCCCTCACAGGGCCCAGGGTGAAGTTGGCCTG----GGAGAGCCCAGCCTGAGGCTGCCGGCCAGGGCACTGGGGGAGGTCATCGCCCCTCTCTTTGTACAGAGCGTATCTGATGTAGCCGACATCAGAGCCACACTGCAGGGTCAGGTTCCCTCCAGGGGTCACGACAGGGCCCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60149841 234 + 64156825 GGGCCGACCACTTGGAAGAGACATTGTGTGCACCGTAGCATCTGTACTGGCCCCCGTGGGAGCCCCTCACAGGGTTCAGGGTGAAGCTGGCCTG----GGAGAGCCCAGCCTGGGACTGCTGTCCAGGGCGCTGGGGGAGGCCATCGCCCCCCTCCTTGTACAGAGCGTATCTGATGTAGCCGACATCAGAGCCACACTGGAGGGTCAGGTTCTCTCCGGGGGCCACGACAGGGCCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55238240 234 + 59248254 GGGCCGACCACTTGGAGGAGACATTGTGTGCACCGTAGCATCTGTACTGGCCCCCGTGGGAGCCCCTCACAGGGTTCAGGGTGAAGCTGGCCTG----GGAGAGCCCAGCCTGGGACTGCTGTCCAGGGCGCTGGGGGAGGCCATCGCCCCCCTCCTTGTACAGAGCGTATCTGATGTAGCCGACATCAGAGCCACACTGGAGGGTCAGGTTGTCTCCGGGGGCCACGACAGGGCCCT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47035678 234 + 50890351 GGGCCGACCACTCGGAGGAGACATTGTGTGCACCGTAGCATCTGTACTGGCCCCCGTGGGAGCCCCTCACAGGGTTCAGGGTGAAGCTGGCCTG----GGAGAGCCCAGCCTGGGACTGCTGTCCAGGGCGCTGGGGGAGGCCATCGCCCCCCTCCTTGTACAGAGCGTATCTGATGTAGCCGACATCAGAGCCACACTGGAGGGTCAAGTTCTCTCCAGGGGCCACGACAGGGCCCT i chlSab2.chr6 I 8559 C 0 s calJac3.chr22 45563464 234 + 49145316 GGGCTGACCACTCGGAGGAGACGTTGTGGGCACCGTAGCATCTGTACTGGCCCTCGTGGGAGACCCTCACAGGGCTCAGGGTGAAGTTGGCCTG----AGAGAGCCCAGCCTGGGACTGCTCTCTAGGGCGCTGGGGGAGGACATCACCCCCCTCCTTGTACAGAGCATAGCTGACGTACCCGACATCAGAGCCACATTGGAGGGTCAGGTTCTCTCCGGGGGCCACAATGGGGCTCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19744654 225 - 122678785 GGGCCAACCACTGGGAGGAGAGGTTGT--TCACCATAGCATGGGTACCAGCTCCTGTGGAAGGGTCTCACTGGGCCCAGGGGGAAGGAAGTCTGCTCCAGAGAGCCAAGCCTGGGACTGCCGGCCATGACACTGGGAAGGGCCA-CATGCCCCTCCTTGGACAGAGCAAATCTGTCATAGCCAACATCAGAGAGGCACGGGAGAG----------TCCAGAGGTCACAACAGGGCTCT i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47344742 409 + 51301725 M a score=557142.000000 s hg38.chr19_GL949747v2_alt 319010 189 + 729520 GCAGGGTCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAAGATGAGTCGGGACTCGGAGCGGCTGGTTCCTCCTGCGCCCCTTCCTTCTGTAGCCTTCCTCACTAGGGTTTCCAGCGTCCTTGTTTTTTTCTCATTCTGTATTTGTGTCCCCAGGGCCCC----CATCTTCCCCTCATCTTTTCTTCTT s panTro4.chr19 59271641 189 + 63644993 GCAGGGTCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAAGATGAGTCGGGACTTGGAGCCGCTGGTTCCTCCCACGCCCCTTCCTTCTGTAGCCTTCCTCACTAGGGTTTCCAGCGTCCTTGTTTTTTTCTCATTCTGTATTTGTGTCCCCAGGGCCCC----CATCTTCCCCTCATCTTTTCTTCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56128517 189 + 60714840 GCAGGGTCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAAGACGAGTCGGGACTCGGAGCAGCTGGTTCCTCCCACGCCCCTTCCTTCTGTAGCCTTCCTCACTAGGGTTTCCAGCGTCCTTGTTCTTTTCTCATTCTGTATTTGTGTCCCCAGGGCCCC----TGTCTTCCCCTCGTCTTTTCTTCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102891059 189 - 106955855 GTAGGGTCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAAGAAGAGTCGGGACTCGGAGGGGCTGGTTCCTCCCACGCCCCTTCCTTCTGTAGCCTTCCTCACTAGCATTTCCAGCGTCCTTGTTTTTTTCTCATTCTGTGTTTGTGTCCCCAGGGCCCC----CGTCTTCCCCTCATCTTTTCTTCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60150075 159 + 64156825 GCAGGGTCAGGAGGGAGGGCTTCCTAGACACACCTGGAGGGAAAGTCGAGTCGGGACTCGGAGGGGCTGGTTCCTCCCGCACCCCTTCCTTCTGGAGACTTCCTCACTAGGGTTTCCAGTGTCCTTGTTTTTTTCTCATCCTGTATTTGTGTCCCCAGG---------------------------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55238474 189 + 59248254 GCAGGGTCAGGAGGGAGGGCTTCCTAGACACACCTGGAGGGAAAGTCGAGTCGGGACTTGGAGGGGCTGGTTCCTCCCGCACCCCTTCCTTCTGGAGCCTTCCTCACTAGGGTTTCCAGTGTCCTTGTTTTTTTCTCATCCTGTATTTGTGTCCCCAGGACCCC----CGTCTTCCCCTCATCttttcttctt i macFas5.chr19 C 0 I 383 s papAnu2.chr19 47345151 189 + 51301725 GCAGGGTCAGGAGGGAAGGCTTCCTAGACACGCCTGGAGGGACAGTCGAGTCGGGACTCGGAGGGGCTGGTTCCTCCCGCGCCCCTTCCTTCTGCAGCCTTCCTCACTAGGGTTTCCAGCgtccttgtttttttctcatcctgTATTTGTGTCCCCAGCGCCCC----CGTCTTCCCCTCGTCTTTTCTTCTT i papAnu2.chr19 M 409 C 0 s chlSab2.chr6 47035912 189 + 50890351 GCAGGGTCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAAGTTGAGTCGGGACTTGGAGGGGCTGGTTCCTCCTGCGCCCCTTCCTTCTGGAGCCTTCCTCACTAGGGTTTCCAGTGTCCTTGTTTTTTTCTCATCCTGTATTTGTGTCCCCAGGGCCCC----CATCTTCCCCTCATCTTTTCTTCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45563698 186 + 49145316 GCAGGGTCAAGAGGGAGGGTTTCCTAGACACACCTGGAGGGAAAGAGGAGCCAGGACTCAGA-TGGCCGATTGCCCCTATGCCCCTTCCTTCCGTAGTCTTCCTCACTAGGGTCTCCAGTGTCCTCGTT-TTTCCTCACTCTATATCTGTGTCCCCAGGGGCCC-----GTTTTTCCCTTATCTTTTCTTCTC i calJac3.chr22 C 0 I 1 s canFam3.chr1 19744879 178 - 122678785 GCTGGGTCAGGAGAGAGGGCTTCCTTGACACACCTG--GGAGAAGACCAGCTGTGGATTGTAGGGGCTGATTCTCCCCAAACCTCCCTTCTC-----CCATCCTGACCCCAGGTCTCATGTCCCTCACCCTCTGATTCTCTGATCTGTGAGCTCCATGGTCCCCTCACCATCCCCCCTTCATCTG-------- i canFam3.chr1 C 0 C 0 a score=600.000000 s hg38.chr19_GL949747v2_alt 319199 1 + 729520 G s panTro4.chr19 59271830 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56128706 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102891248 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19745057 0 - 122678785 C e calJac3.chr22 45563884 1 + 49145316 I e chlSab2.chr6 47036101 0 + 50890351 C e papAnu2.chr19 47345340 0 + 51301725 C e macFas5.chr19 55238663 383 + 59248254 I e rheMac3.chr19 60150234 0 + 64156825 C a score=1392822.000000 s hg38.chr19_GL949747v2_alt 319200 417 + 729520 CGTGGG-CTAGCCCGAGGGTAAGGCTCCCAACAGCTCACCTGGTGCC-CTGAC-TTTGTAT--AAGGAAAAGCTACGGCTTCCTCACCTGACACCAGTAGCTGCAGGGGGTCACTGGGTTCCGACCACA-CGTATGGGGTGTTGTTTTCATAGCCGTAGCATCTGAATGTACCCCTGTTGCTGAAGGTCAGGGGGCCCATGGGGAACAGGGCCTGGAACTTTCCA-TGGTTGTGTTGGTGTGAGTTCAGGGTCCAGGAGAGCCTGTGGTCTCCTTCCTCAATCAGAGTGAACCTGCCCAGTCCCAGCCGTGAGGCACACCGGAGGGTCACGTTCACTCCTGAGGTCACCACAGGGCTTGGCAGTGCGGACAGGGTGGGTCTGCTGTAGGCTTTCAAGAGAAAAAAAGGCAGCCGTGTTTAAATG s panTro4.chr19 59271831 417 + 63644993 CGTGGG-CTAGCCTGAGGGTAAGGCTCCCAACAGCTCACCTGGTGCC-CTGAC-TTTGTAT--AAGGAAAAGCTACGGCTTCCTCACCTGACACCAGTAGCTGCAGGGGGTCACTGGGTTCCGACCACA-CGTACGGGGTGTTGTTTTCATAGCCGTAGCATCTGAATGTACCCCTGTTGCTGAAGGTCAGGGGGCCCATGGGGAACAGGGCCTGGAACTTTCCA-TGGTTGTGTTGGTGTGAGTTCAGGGTCCAGGAGAGCCTGTGGTATCCTTCCTCAATCAGAGTGAACCTGCCCAGTCCCAGCCGTGAGGCACACCGGAGGGTCACGTTCACTCCTGAGGTCACCACAGGGCTTGGCAGGGCGGACAGGGTGGGTCTGCTGTAGGCTTTCAAGAGAAAAAAAGGCAGCCGTGTTTAAATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56128707 417 + 60714840 CATGGG-CTAGCCTGAGGGTAAGGCTCCCAACAGCTTACCCGGTGCC-CTGAC-TTTGTAT--AAGGAAAGGCTACGGCTTCCTCACCTGACACCAGTAGCTGCAGGGGGTCACTGGGTTCTGACCACA-CGTACGGGGTGTTGTTTTCATAGCCGTAGCATCTGAATGTACCCCTGTTGCTGAAGGTCAGGGGGCCCATGGGGAACAGGGCCTGGAACTTTCCG-TGGTTGTGTTGGTGTGAGTCCAGGGTCCAGGAGAGCCTGTGGTCTCCTTCCTCAATCAGAGTGAACCTGCCCAGTCCCAGCCGTGAGGCACACCGGAGGGTCACATTCACTCCTGAGGTCACCACAGGGCTCGGCAGGGCAGACAGGGTGGGTCTGCTGTAGGCTTTCCGGAGATAAAAAGGCAGCCGTGTTTAAATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102891249 418 - 106955855 CGTGGG-CTAGCCTGAGGGTAAGGCTCCCAACAGCTCACCCGGTGCC-CTGACTTTTGTAT--AAGGAAAGGCTATGGCTTCCTCACCTGACACCAGTAGCTGCAGGGGGTCACTGGGTTCTGACCACA-CGTACGGGGTGTTGTTTTCATAGCCGTAGCATCTGAATGTACCCCTGTTGCTGAAGGTCAGGGGGCCCATGGGGAACAGGGCCTGGAACTTTCCA-TGGTTGTGCTGGTGTGAGTCCAGGGTCCAGGAGAGCCTGTGGTCTCCTTCCTCAATCAGAGTGAACCTGCCCAGTCCCAGCCGTGAGGCACACCGGAGGGTCACGTTCACTCCTGAGGTCACCACAGGGCTCGGCAGGGCAGACAGGGTGGGTCTGCTGTAGGCTTTCAGGAGAAGAAAAGGCAGCCGTGTTTAAATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60150234 404 + 64156825 ---------------AGGGTAAGGCTCCCAACAGCTCAGCCGCTGCC-CTGAC-TTTGTGTAAAAGGAAAAGCTACGGCTT-CTTACCTGACACCAGTAGCTGCAGGGGGTCACTGGGTTCCGACCACA-CGTACGGGGTGTTGTTTTCATAGCCGTAGCATCTGAACGTACCCCTGTTGCTGAAGGTCAGGGGACCCACGGGGAACAGGGCCTGGAACTTTCCA-TGGTTGTGTTGGTGTGAGTCCAGGGTCCAGGAGAGCCTGTGGTCTCCTTCCTCGATCAGAGTGAACCTGCCCAGTCCCAGCCGTGAGGCACACCGGAGGGTCACGTTCACTCCGGAGGTTACCACAGGGCTCGGCAGGGCGGACAGGCTGGGTCTGCTGTAGGCTTTCAGGAGAGCAAAGGGCAGCTGTGTTTACGTG i rheMac3.chr19 C 0 I 4571 s macFas5.chr19 55239046 418 + 59248254 CGTGGG-CTAGCCTGAGGGTAAGGCTCCCAACAGCTCAGCCGCTGCC-CTGAC-TTTGTGTAAAAGGAAAAGCTACGGCTT-CTTACCTGACACCAGTAGCTGCAGGGGGTCACTGGGTTCCGACCACA-CGTACGGGGTGTTGTTTTCATAGCCGTAGCATCTGAACGTACCCCTGTTGCTGAAGGTCAGGGGACCCACGGGGAACAGGGCCTGGAACTTTCCA-TGGTTGTGTTGGTGTGAGTCCAGGGTCCAGGAGAGCCTGTGGTCTCCTTCCTCGATCAGAGTGAACCTGCCCAGTCCCAGCCGTGAGGCACACCGGAGGGTCACGTTCACTCCGGAGGTCACCACAGGGCTCGGCAGGGCGGACAGGCTGGGTCTGCTGTAGGCTTTCAGGAGAGCAAAGGGCAGCTGTGTTTACGTG i macFas5.chr19 I 383 C 0 s papAnu2.chr19 47345340 416 + 51301725 CGTGGG-CTAGCCTGAGGGTAAGGCTCCCAACAGCTCAGCCGCTGCC-CTGAC-TTTGTGT--AAGGAAAAGCTACGGCTT-CTTACCTGACACCAGTAGCTGCAGGGGGTCACTGGGTTCCGACCACA-CGTACGGGGTGTTGTTTTCATAGCCGTAGCATCTGAACGTACCCCTGTTGCTGAAGGTCAGGGGACCCACGGGGAACAGGGCCTGGAACTTCCCA-TGGTTGTGTTGGTGTGAGTCCAGGGTCCAGGAGAGCCTGTGGTCTCCTTCCTCGATCAGAGTGAACCTGCCCAGTCCCAGCCGTGAGGCACACCGGAGGGTCACGTTCACTCCTGAGGTCACCACAGGGCTCGGCAGGGCGGACAGGCTGGGTCTGCTGTAGGCTTTCAGGAGAGCAAAGGGCAGCTGTGTTTACGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47036101 416 + 50890351 CGTGGG-CTAGCCTGAGGGTAAGGCTCCCAACAGCTCAGCCGCTGTC-CTGAC-TTTGTGT--AAGGAAAAGCTACGGCTT-CTTACCTGACACCAGTAGCTGCAGGGGGTCACTGGGTTCCGACCACA-CGTACGGGGTATTGTTTTCATAGCCGTAGCATCTGAACGTACCCCTGTTGCTGAAGGTCAGGGGACCCACGGGGAACAGGGCCTGGAACTTTCCA-TGGTTGTGTTGGTGTGAGTCCAGGGTCCAGGAGAGCCTGTGGTCTCCTTCCTCGATCAGAGTGAACCTGCCCAGTCCCAGCCGTGAGGCACACCGGAGGGTCACGTTCACTCCTGAGGTCACCACAGGGCTTGGCAGGGCGGACAGGCTGGGTCTGCTGTAGGCTTTCAGGAGAGCAAAGGGCAGCTGTGTTTACGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45563885 416 + 49145316 AGTGGGTCTAGCCTGAGGGCAAGGCTGCCAACAGCTCCCCTG-TACC-CTGAC-GTTGTAT--AAGGAAAGGCTGTGGCGTGCTCACCTGACACCAGGAGCTGCAGGGGGTCACTGGGTTCTGACCACA-CGTAGGGGGTATTGTTTCGATAGCCGTAGCATCTGAATGTACCCCTGTGGCTGAAGATCAGGGGGCCCATGGGGAACAGGGCCTGGAACTTTCCA-TGGTTGTGTTGGTGTGAGTCCAGGGTCCAGGAGAGCCTGTGGATTCCTTCCTCAATCAGAGTGAACCTGTCCAGTCCCAGCCGAGAGGCACATCGGAGGGTCACGTTCACTCCTGAGGTCACCACGGGGCTTGGCAGGGCTGAAAGGGTGGGTCTGCTGTAGCCTTTAGGAGAAAAAAACAGCAGCCTTG-TTAAATG i calJac3.chr22 I 1 C 0 s canFam3.chr1 19745057 410 - 122678785 ---GGG-CTCCCTTGGGAGCAAAGACCCCAGTAACCTGTCTGGTGCCTCAAAC-CATGGAT--GGGACAAAAATCTGACTTCCTTATTTGAGACCAGCAGCTTAAAGGGGTCACTGGGGAAGGACCCCACCCTGGGGGATGTTGTT---ATAACCATACCATCTGAACATCCACGTGAAGCTGGGGGCCACAGGGCCCACAGGGAACAGGGTCTGGATCCCCCTACTAGGTGC-TCGCTAGGAGTCCTGGGTCCAGGGGTGCTGGCATTGTCCTTCCTTCATCAGGACAGACCTGCGGAATCCTGTCCATGAATCACACTGGAGGGTCACATGCCCTCCTGAGGGCACAACAGGGCTGGGCAGGACTGAGAGGTTGGGTTTGCCATGCAATCCTAGGTGAGAGGAGGG--GCTGTG-TTAAATG i canFam3.chr1 C 0 C 0 a score=1764825.000000 s hg38.chr19_GL949747v2_alt 319617 513 + 729520 GGGCTCACA-CCTCCC------ACCTTATCCTACAAGGCTGGGCTGTGAGAAGG-GAGACCCCTCGAGAGCTGAGAGCCGACCCCCTTCCCGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTCTGATAGTAACAGTGATATCGCCCTGCATGTTCCCACATCATGGATGGGATGGAGAGTTTGACCTTGTTTTCAGACTCCAGTGTTTTTAATATGTGCCTCGACATTGAGTTTCCCTCTTTATCCAGACGGTACCCCTGGGCCTCCAGGGTGCCCTGACACCAGATGGTCACGGGGTTATGCCAGGTGATCACGGGACCTGGCTCGGCCCACAGGATGGGTTTGGGTAGGTTTTCTGGAAGGAAATTACAGGTTAGGTCCCAAGATGTcctcaaccctcagatcccagctctcagccccagga-ccc--ccctcatcccca-tcagtcagcccAGAACTGC s panTro4.chr19 59272248 513 + 63644993 GGGCTCACA-CCTCCC------ACCTTATCCCACAAGGCTGGGCTGTGAGAAGG-GAGACCCCTCGAGAGCTGAGAGCTGACCCCCTTCCCGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGAGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTCTGATAGTAACAGTGGTATCGCCCTGCATGTTCCCACATCATGGATGGGATGGAGAATTTGACCTTGTTTTCAGACTCCAGTGTTTTTAATATGTGCCTCGACATTGAGTTTCCCTCTTTATCCAGACGGTACCCCTGGGCCTCCAGGGTGCCCTGACACCAGATGGTCACGGGGTTATGCCAGGTGATCACGGGACCTGGCTCGGCCCACAGGATGGGTTTGAGTAGGTTTTCTGGAAGGAAATCACAGGTTAGGTCCTAAGATGTCCTCAACCCTCAGATCCCAAATCTCAGCCCCAGGA-CCC--CCCTCATCCCCA-TCAGTCAGCCCAGAACTGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56129124 513 + 60714840 GGGCTCACA-CCTCCC------ACCTTATCCCACAAGGCTGGGCTGTGAGAAGG-GAGACCCCTGGAGAGCTGAGAGCTGAGCCCCTTCCCAAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTCTGATAGTAACAGTGATATCGCCCTGCGTGTTCCCACATCATGGATGGGATGGAGAATTTGACCTTGTTTTCGGACTCCAGTGTTTTTAATATGTGCCTCGACATTGAGTTTCCCTCTTTATCTAGACGGTACTCCTGGGCCTCCAGGGTGCCCTGACACCAGATGGTCACAGGCTTACTCCAGGTGATCACGGGACCTGGCTCGGCCCACAGGAAGGGTTTGAGTAGGTTCTCTGGAAGGAAAACACAGGTTAGGTCCCAAGATGTCCTCAACCCTCAGATCCCAGCTCTCAGCCCCAGGA-CCC--CCCTCATCCCCA-TCAGTCAGCCCAGAACTGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102891667 513 - 106955855 GGGCTCACA-CCTCCC------ACCTTATCCCACAAGGCTGGGCTGTGAGAAGG-GAGACCCCTTGAGAGCTGAGAGCCGACCCCCTTCCCGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGGGGGTGGCTGGGCTCTGACCAGCCTGCAGGGCTGCGATAGTAACAGTGATATCGCCCTGCGTGTTCCCACATCATGGATGGGATGGAGAATTCGATCTTGTTTTCTGACTCCAGTGTTTTTAATTTGTGCGTCGACATTGAGTTTCCGTCTTTATCCAGACGGTACTCCCGAGCCTCCAGGGGACCCTGACACCAGATGGTCACGGGCTTCTTCCAGGTGATCACGGGACCTGGCTCGGCCCACAGGCTGGGTTTGAGTGGGGTCTCTGGAAGGAAATCACAGGTTAGGTCCCAAGATGTCCTCAACCCTCAGATCCCAGTTCTCAGCCCCAGGA-CCC--CCCTCATCCCCA-TCAGTCAGCCCAGAACTGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60155209 513 + 64156825 GGGCTCACA-CCTCCC------ACTTTATCCCGCAAGGCTGGGCTGTGAGAGGG-GAGACCCCTTGAGAGCTGAGAGCTGACCCCCTTCCCGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTCTGATAGTAACAGTGGTATCGCCCTGCGTGTTCCCACATCATGGATGGGATGGAGAATTTGGCCTTGTTTTCAGACTCCAGTGTTTTTAACATGTGCCTCAACATTGAGTTTCCCTCTTTATCCAGACGGTACTCCTGGGCCTCCAGGGTGCCCTGACACCAGATGGTCACGGGCTTTTTCCAGATGATCACGGGACCTGGCTCGGCCCACAGGATGGGTTTGAGTAGGTTCTCTGGAAGGAAACCACAGGTTAGGTCTGAAGATGTCCCCAACCCTCAGATTCCGGCTCTCAGCCCCAGGA-CCC--CCGTCATCCCCA-TCAGTCAGCCCAGAACTGC i rheMac3.chr19 I 4571 C 0 s macFas5.chr19 55239464 514 + 59248254 GGGCTCACA-CCTCCC------ACTTTATCCCGCAAGGCTGGGCTGTGAGAGGG-GAGACCCCTTGAGAGCTGAGAGCTGACCCCCTTCCCGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTCTGATAGTAACAGTGGTATCGCCCTGCGTGTTCCCACATCATGGATGGGATGGAGAATTTGGCCTTGTTTTCAGACTCCAGTGTTTTTAACATGTGCCTCAACATTGAGTTTCCCTCTTTATCCAGACGGTACTCCTGGGCCTCCAGGGTGCCCTGACACCAGATGGTCACGGGCTTTTTCCAGATGATCACGGGACCTGGCTCGGCCCACAGGATGGGTTTGAGTAGGTTCTCTGGAAGGAAATCACAGGTTAGGTTCGAAGATGTCCCCAGCCCTCAGATTCCAGCTCTCAGCCCCAGGACCCC--CCATCATCCCCA-TCAGTCAGCCCAGAACTGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47345756 513 + 51301725 GGGCTCACA-CCTCCC------ACTTTATCCCACAAGGCTGGGCTGTGAGAGGG-CAGACCCCTTGAAAGCTGAGAGCTGACCCCCTTCCCGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTCTGATAGTAACAGTGGTATCGCCCTGCGTGTTCCCACATCATGGATGGGATGGAGAATTTGACCCTGTTTTCGGACTCCAGTGTTTTTAACATGTGCCTCGACATTGAGTTTCCCTCTTTATCCAGACGGtactcctgggcctccagggcGCCCTGACACCAGATGGTCACGGGCTTTTTCCAGATGATCACGGGACCTGGCTCGGCCCACAGGATGGGTTTGAGTAGGTTCTCTGGAAGGAAACCACAGGTTAGGTCTGAAGATGTCCCCAACCCTCAGATTCCGGCTCTCAGCCCCAGGA-CCC--CCGTCATCCCCA-TCAGTCAGCCCAGAACTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47036517 514 + 50890351 GGGCTCACA-CCTCCC------ACTTTATACCACAAGGCTGGGCTGTGAGAGGG-GAGACCCCTTGGGAGCTGAGAGCTGACCCCCTTGCCGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTCTGATAGTAACAGTGATATCGCCCTGCGTGTTCCCACATCATGGATGGGATGGAGAATTTGACCTTGTTTTCAGGCTCCAGTGTTTTTAACATGTGCCTCGACATAGAGTTTCCCTCTTTATCCAGACGGTACTCCTGGGCCTCCAGGGTGCCCTGACACCAGATGGTCATGGGCTTTTTCCAGACGATCACGGGACCTGGCTCGGCCCACAGGGTGGGTTTGAGTAGGTTCTCTGAAAGGAAATCACAGCTTAGGTCCGAAGATGTCCCCAACCCTCAGATTCCAGCTCTCAGCCCCAGGACCCC--CCGTCATCCCCA-TCAGTCAGCCCAGAACTGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45564301 501 + 49145316 GGGCTCACA-CCTCCCCATTTAACCCTCTCCCTCAGGGCTGGGCTGTGAGAGG---------------------GAGCTGACCCCCTTCCCGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCCGACCAGCCTGCAGGGCTCTGGTAGTAACAGTGATATCGCCCTGCGTGTTTCCACTGCATGGCTGGGATGGAGAATTTGACCTTGTTTTCAGAATCCAGTGTTTTTAATATAGTCCTTGACATTGAACCTCCATCTTTAGCCAGACGGTACTCCTGGGCCTCCTGGGTGCCCTGACACCAGAGGGTCACAGGCTTATTCCAGGTGCTCACGGGACCTGGCTCAGCCCACAAGATGGGTTGGAGTAGGTTCTCTGGGAGGAAACCACAGGTTAGGCCCCAAGATGTCCCCACCCCTCAGATCCCAGCTCACAGCCCCAGGA-CCCTTCAGACACCCCCA-GCAGTCAGTCCTGAGCTGC i calJac3.chr22 C 0 I 394 s canFam3.chr1 19745467 502 - 122678785 GGGCTCAGATCCCCCC------ACATGATCCC-CAGGACTCGGCTGTGAGAGGGTGACACC---------CTGAGAGCAGACCCCCTTCCTGAGGGCAGCACCTGGGGCTGGG--CCCTGAATGGGCTCGCAACATGTCACCAGCAGCTCCAGGGAGTCACTGGGCTCTGGCCACTCAGTGGTGCTTCCATAGTAACAGTAATATTGTCCTGCATATACACCTGTCATGTGTGTGATGGAGAACTTAGCCTTGTCCTTGGGCTCTAGTGACTCCTGTCTGTCCCAAGTCACCGATTGTCTCTCTCTATGCAGGCGATATACCTTGGCCTCCAGGCTTCCCTGACACCAGAGGGTCACTGGTGTCCTCCAGGGGATCACAGAACCAGGCTCAGCCCAGATGGTGGGTTTGGGGAGGGTCCCTGGAAGGAAA-CAGAGGCTGGGTCACAAGACCCTCTGCACCCCCGGTTCCCAG--CTCAGCCCCAACC-CCC--CAGGTATCCCCACTCTGTCTGCCCAGAGCTGC i canFam3.chr1 C 0 C 0 a score=1631961.000000 s hg38.chr19_GL949747v2_alt 320130 481 + 729520 TGTCTTCACCCCCAGCTGCCCAG-GGGTGGTCCCTTGTCCCCAGAGAGGAGGAGGGACCTAGGACAGCTGGGGACAGACTCACCTGCCTGCACCCGGGTCCTGGGGCCCAGGCTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCTCCGAAGCCTGAGCAGGTCTTCTTCT--TTTCCTTGAGCC-------CCTGGGATGCCCTAATTGACTAAGGCATGGCTATGGATTGGGGTCTCTCTCCTAGACTAGGGTCTCTCCTCCCCCTCTTAAGATCTCACCAAAGAAGAGCAGGCTTGTGAGAATGAGGGTCATGGCAT---CTCCTCCTCCTGGCCCTGGCTGTGCAGGCAGGTGTGGCCACGGTGCCCGTAGACACAGACAGACACATGGTGTGCGGGCACACGGAGGCTGGGTCCTCCCCATCACGAGGTTGTCCCATCAGCAC-----ACCGACAGAAAGAGGAACTGCCCCTCCCCAGG------ACCCTGGCT s panTro4.chr19 59272761 478 + 63644993 TGTCTTCACCCCCAGCTGCCCAG-GGGTGGTCCCTTGTCCCCAGAGAGGAGGAGGGACCTAGGACAGCTGGGGACAGACTCACCTGCCTGCACCCGGGTCCTGGGGCCCAGGCTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCTCCGAAGCCTGAGCAGG---TCTTCT--TTTCCTTGAGCC-------CCTGGGATGCCCTAATTGACTAGGGCATGGCTATGGATTGGGGTCTCTCTCCTAGACTAGGGTCTCTCCTCCCCCTCTTAAGATCTCACCAAAGAAGAGCAGGGTTGTGAGAATGAGGGTCATGGCAT---CTCCTCCTCCTGGCCCTGGCTGTGTAGGCAGGTGTGGCCACGGTGCCCGTAGACACAGACAGACACATGGTGTGCGGGCACACGGAGGCTGGGTCCTCCCCATCACGAGGTCGTCCCATCAGCAC-----ACCGACAGAAAGAGGAACTGCCCCTCCCCAGG------ACCCTGGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56129637 480 + 60714840 CGTCGTCACCCCCAGCCACCCAG-GGGTGG-CCCTTGTCCCCAGAGAGGAGGAGGGACCTAAGACAGCTGGGGACAGACTCACCTGCCTGCACCCGGGTCCTGGGGCCCAGGCTCAGCCCTGGAAGAGAGTTCCCCGTGAAAGATTTGCCCCCAAAGCCTGAGCAGGTCTTCTTCC--TTTCCTTGAGCC-------CCTGGGGTGCCCTAATTGACCAGGGCCTGGCTATGGATTGGGGTCTCTCTCCTAGACTAGGGTCTCTCCTCCCCGTCTTAAGATCTCACCAAAGAAGAGCAGGGTTGTGAGAATGGGGGTCATGGCAT---CTCCTCCTCCTGGCCCTGGCTGTGCAGGCAGATGTGACCACAGTGCCCGTAGACACAGACAGACACATGGTGTGCGGGCACACGGAGGCTGGGTCCTCCCCATCACGAGGTCGTCCCATCAGCAG-----CCCCACAGAAAGAGGAACTACCCCTCCCCAGG------ACCCTGGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102892180 478 - 106955855 TGTCGTCACCCCCAGCCGCCCAG-GGGTGGTCCCTTGTCCCCAGAGAGGAGGAAGGACCTAGGACAGCTGGGGACAGACTCACCTGCCTGCACCTGGGTCCTGGGGCCCAGGCTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCCCCAAAGCCTGAGCAGG---TCTTGT--TTTCCTTGAGCC-------CCTGGGGTGTCCTAATTGACCAGGGCATGGCTATGGATTGGGGTCTCTCTCCTAAACTAGGGTCTCTCCTCCCCCTCTTAAGATCTCACCGAAGAAGAGCAGGGTTGTGAGAATGGGGGTCATGGCAT---CTCCTCCCCCTGGCCCTGGCCGTGCAGGCAGATGTGACCACGGTGCCCGTAGACACAGACAGACACACGGTGTGCGGGCACACGGAGGCTGGGTCCTCCCCATCACAAGGTCGCCCCATCAGCAG-----CCCCACAGAAAGAGGAACTGGCCCTCCCCAGG------AGCCCGGCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60155722 476 + 64156825 TGTCTCCACCCCCAGCTGCCCAG-GGGTGGTCCCTTGTCCCCAGAGAGGAGGAGGGACCTGGGACAGCTGGGGACAGACTCACCTGCCTGCAGGCAGGTCCTGGGGCCCAGGTTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCCCCAAAGCCTGAGCAGG---TCTTCT--TTTCCTTGAGCC-------CCTGGGGTGTCCTAATTGACCAGGGCCTGGCTATGGATTGGGGTCTCTCTCCTAGACTAGGGTCTCTCCTCCCCCTCTTAAGATCTCACCAAAGCAGAGCAGGGTTGTGAGAATGGGGGTCATGGCAT---CTCCTCCTCCTGGCCCTGGCTGTGCAGGCAGGTGTGAGCACGGTGCCCGTAG--ACAGACAGACACATGGTGTGTAGGCACACGGAGGCTGGGTCCTCCCCATCACGAGGTCATCCCATCAGCAG-----CCCCACAGAAAGAGGAACTGCCCCTCCCCAGG------AGCCTAGCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55239978 476 + 59248254 TGTCTCCACCCCCAGCTGCCCAG-GGGTGGTCCCTTGTCCCCAGAGAGGAGGAGGGACCTAGGACAGCTGGGGACAGACTCACCTGCCTGCAGGCAGGTCCTGGGGCCCAGGCTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCCCCAAAGCCTGAGCAGG---TCTTCT--TTTCCTTGAGCC-------CCTGGGGTGTCCTAATTGACCAGGGCCTGGCTATGGATTGGGGTCTCTCTCCTAGACTAGGGTCTCTCCTCCCCCTCTTAAGATCTCACCAAAGCAGAGCAGGGTTGTGAGAATGGGGGTCATGGCAT---CTCCTCCTCCTGGCCCTGGCTGTGCAGGCAGGTGTGAGCACGGTGCCCGTAG--ACAGACAGACACATGGTGTGTAGGCACACGGAGGCTGGGTCCTCCCCATCACGAGGTCATCCCATCAGCAG-----CCCCACAGAAAGAGGAACTGCCCCTCCCCAGG------AGCCTGGCT i macFas5.chr19 C 0 M 14663 s papAnu2.chr19 47346269 476 + 51301725 TGTCTCCACCCCCAGCTGCCCGG-GGGTGGTCCCTTGTCCCCAGAGAGGAGGAGGTACCTAGGACAGCTGGGGACAGACTCACCTGCCTGCAGGCAGGTCCTGGGGCCCAGGCTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCCCCAAAGCCTAAGCAGG---TCTTCT--TTTCCTTGAGCC-------CCTGGGGTGTCCTAATTGACCAGGGCCTGGCTATGGATTGGGGTCTCTCTCCTAGACTAGGGTCTCTCCTCCCCCTCTTAAGATCTCACCAAAGCAGAGCAGGGTTGTGAGAACGGGGGTCATGGCAT---CTCCTCCTCCTGGCCCTGGCTGTGCAGGCAGATGTGAGCACGGTGCCCgtag--acagacagacacatgGTGTGTAGGCACACGGAGGCTGGGTCCTCCCCATCACGAGGTCATCCCATCAGCAG-----CCCCACAGAAAGAGGAACTGCCCCTCCCCAGG------AGCCTGGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47037031 477 + 50890351 TGTCTCCACCCCCAGCTGCCCAG-GAGTGGTCCCTTGTCCCCAGAGAGGAGGAGGGACCTGGGACAGCTGGGGACAGACTCACCTGCCTGCAGGCAGGTCCT--GGCCCAGGCTCAGCTCTGGAAAAGAGTTCCCTGTGACAGATTTGCCCCCAAAGCCTGAGCAGG---TCTTCT--TTTTCTTGAGCC-------CCTGGGATGTCCTAATTGACCAGGGCCTGGCTATGGATTGGGGTCTCTCTCCTAGACTAGGGTCTCTCCTCCCCGTCTTAAGATCTCACCAAAGCAGAGCAGGGTTGTGAGAATGGGGGTCATGGCATTTCCTCCTCCTCCTGGCCCTGGCTGTGCAGGCAGATGTGAGCACGGTGCCCGTAG--ACAGACAGACACATGGTGTGTAGGCACACGGAGGCTGGGTCCTCCCCATCACGAGGTCATCCCATCAGCAG-----CCCCACAGAAAGAGGAACTGCCCCTCCCCAGG------AACCTGGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45565196 473 + 49145316 TTTCTCCATCCCCAGCTGCCCAG-GGGTGACCCCTTGTCCCCAGATAGGAG---GGACCTGGGACAGCTGGGGACAGACTGACCTGCCTGCACATGGGTCCTGGGGCCCAAACTCAGCCCTGGAAGAGAGTTCCCAGTGAGAGATTTGTCCCCAAAGCCGGAGCAGG---TCTTCTTCTTTCCTTGAGCC-------CCTGGGGTGTCCTAATTGACCAGGATCTGGCTATGGATTGGGG--TCTCTCCTAGACTAGGGTCTCTCCTCCCCCTCTTAAGATCTCACCAAAGCAGAGCAGGATTGTGAGAATGGGAGTCATGGCAT---CTCCTCCTCCTGGCCCCAGCTGTGCAGGTGGATGTGACTGTGGTGCCCACAGG-ACAGACAGACACATGGTGTG-GGGCACTCGGAGGCTGGGTCCTCCCCATCACGAGGTCGTCCCATTGGCAG-----CCCCACAGAAAGAGGAACTGCCCCTCCCCAGG------AGCTTGGCT i calJac3.chr22 I 394 C 0 s canFam3.chr1 19745969 486 - 122678785 --TGATCACCAGCCCCTGCCTGGTGGGTGGTCCC-TGTTCTCAGTGAGGAGGTGGGACTGGGACCCCCTGGGGACAGACTCACCTGCCTGCACTCGCGTCCTGGAGCTCATACTCAGCCCTGGAAGAGAG-TCCCTGTGAGAGGTTTGCCT-CAAATCCTGAGCTGAAC-CCCTCC--TCTCCATGAGCCTCCTGAGCCTGAGAT-CTTTGGCAGACCAGGACCTGGCTGTGGGATGGG---TCCCTCCCAGACTAGGGTGTCCCCTCCCC-TCCTCAGATCTCACTTAAACAGAGCAGGGCCATGAGGGTGGGGGTCATGGTGT---CTCCTGTCTTTGGCCCTGGCCCTGCAGAT-GATAGGACCATGAGGCCCAGAGG-ATAGGCAGACGCACAAGGTGTGGGTACTTGGAGGCC-AGTCTTACCCATAATGGGGTTGTCACATTAGCAGGATGTGACTACAGGAAGGGGAACACCCGGTCCCCAGGTCCCCTAGCCTGGCT i canFam3.chr1 C 0 C 0 a score=5828.000000 s hg38.chr19_GL949747v2_alt 320611 2 + 729520 CT s panTro4.chr19 59273239 2 + 63644993 CT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56130117 2 + 60714840 CT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102892658 2 - 106955855 CT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60156198 2 + 64156825 CT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47346745 2 + 51301725 CT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47037508 2 + 50890351 TT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45565669 2 + 49145316 CT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19746455 2 - 122678785 CT i canFam3.chr1 C 0 I 10348 e macFas5.chr19 55240454 14663 + 59248254 M a score=25886.000000 s hg38.chr19_GL949747v2_alt 320613 10 + 729520 CATTTCCCAG s panTro4.chr19 59273241 10 + 63644993 CATTTCCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56130119 10 + 60714840 CATTTCCCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102892660 10 - 106955855 CACTTCCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60156200 10 + 64156825 CATTTCCCAG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47346747 10 + 51301725 CATTTCCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47037510 10 + 50890351 CATTTCCCAG i chlSab2.chr6 C 0 I 18727 s calJac3.chr22 45565671 10 + 49145316 CATTTCCCAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e macFas5.chr19 55240454 14663 + 59248254 M a score=125887.000000 s hg38.chr19_GL949747v2_alt 320623 75 + 729520 GGCTTGTCCTGGGGGTGAGCACCAGGCTCTCTGCCGATATTTCAGACACAAATGGGGATTCACAAGGGGGTCGTT s panTro4.chr19 59273251 75 + 63644993 GGCTTGTCCTGGGGGTGAGCACCAGGCTCTCTGCCGATATTTCAGACACAAATGGGGATTCACAAGGGAGTCGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56130129 75 + 60714840 GGCTTGTCCTGGGGGTGAGCACCAGGCTCTCTGCTGATATTTCAGACACAAATGGGGATTCACAAGGGGGTCGTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102892670 75 - 106955855 GGCTTGTCCTGGGAGTGAGCACCAGGCTGTCTGCCAATATTTCAGACACAAATGGGGACTCACGAGGGGGTCATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60156210 75 + 64156825 GGCTTGCTCTGAGGGTGAGCACCAGACTCTCTGGAGATATTTCAGACACAAATGGGGACTCACAAGGGGGTCATT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47346757 75 + 51301725 GGCTTGCTCTGGGGGTGAGCACCAGACTCTCTGGAGATATTTCAGACACAAATGGGGACTCACAAGGGAGTCTTT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45565681 75 + 49145316 GGCTTGTTCTGAGGGTGAGCACCAGGCTCTCTGCAGGTATTTCAGACAGAAATGGAGATTCACAAGACGGTCACT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47037520 18727 + 50890351 I e macFas5.chr19 55240454 14663 + 59248254 M a score=168652.000000 s hg38.chr19_GL949747v2_alt 320698 83 + 729520 AAGAAGGACATTTTCggccgggcgctgtggctcacagctgtcatcccagcactttgggaggccaaggtgggtggatcacttga s panTro4.chr19 59273326 83 + 63644993 AAGAAGGACGTTTTCggccgggcgctgtggctcacagctgtcatcccagcactttgggaggccaaggtgggtggatcacttga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56130204 83 + 60714840 AAGAAGGACATTTTCggccgggcactgtggctcacacctgtcatcccagcactttgggaggccaaggtgggtggatcacttga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102892745 83 - 106955855 AAGAAGGACGTTTTCggccgggtgccatggctcacacctgtaataccagcactttgggaggccaaggtggatggatcacttga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60156285 81 + 64156825 AAGAAGGACGTTTTTggccgggcgcggtggctcaagcctgtaatcccagcactttgggaggccgaggagggcggatca--tga i rheMac3.chr19 C 0 I 309 s macFas5.chr19 55255703 83 + 59248254 AAGAAGGACGTTTTTggctgggtgttgtggctcacacctgtaatcccagcactttgggaggccaaggtgggtggaccacttga i macFas5.chr19 M 14663 C 0 s papAnu2.chr19 47346832 83 + 51301725 AAGAAGGACGTTTTTGACTGGATGTCCTGGCTTacaaatgtaatcccagcactttgggaggccaaggtgggtggaccacttga i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45565756 81 + 49145316 AAGAAGGACGTTTTTggccaggcacggtggctcacgcctgtaatcctagcactttgggaggccagggcaggcagatcacaa-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47037520 18727 + 50890351 I a score=157717.000000 s hg38.chr19_GL949747v2_alt 320781 66 + 729520 ggtcaggagttcgagaccagcctggccaacatggcaaaaccccgtgtctactaaaaatacaaaaat s panTro4.chr19 59273409 66 + 63644993 ggtcaggagttcgagaccagcctggccaacatggcaaaaccccgtgtctactaaaaatacaaaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56130287 66 + 60714840 ggtcaggagttcgagaccagcctggccaacatgacaaaaccccgtctctactaaaaatacaaaaat i ponAbe2.chr19 C 0 M 117 s nomLeu3.chr10 102892828 66 - 106955855 ggtcaggagttcgagaccagcctggccaacatggcaaaaccccgtctctactaaaaatacaaaaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60156675 66 + 64156825 ggtcaggagttcgagaccagcctggccaacatggcacaaccccgtctctactaaaaatacaaaaat i rheMac3.chr19 I 309 C 0 s macFas5.chr19 55255786 66 + 59248254 ggtcaggagttcgagaccagcctggccaacatggcacaaccccgtctctactaaaaatacaaaaat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47346915 66 + 51301725 ggtcaggagttcgagaccagcctggccaacatggcacaaccccgtctctactaaaaatacaaaaat i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45565837 66 + 49145316 gatcgggaattcgagatcagcctgaccaacatgatgaaaccctgtctctactacaactacgaaaat i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47037520 18727 + 50890351 I a score=37921.000000 s hg38.chr19_GL949747v2_alt 320847 26 + 729520 gagccggtcgtggtggcacatgcctg s panTro4.chr19 59273475 26 + 63644993 gagccggtcatggtggcacatgcctg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102892894 26 - 106955855 gagccgggcgtggtggcgcatgcctg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60156741 26 + 64156825 gagccaggcgtggtggcacaagcctg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55255852 26 + 59248254 gagccaggcgtggtggcacaagcctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47346981 26 + 51301725 gagccaggcgtggtggcacaagcctg i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45565903 26 + 49145316 tagctgggcatagtggtgggtacctg i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e ponAbe2.chr19 56130353 117 + 60714840 M e chlSab2.chr6 47037520 18727 + 50890351 I a score=210621.000000 s hg38.chr19_GL949747v2_alt 320873 93 + 729520 taatcccagctactcgggaggctaaggcgggagaatcacttgaactccggaggcagaggctgcagtgagccgagatcacgccattgccttcca s panTro4.chr19 59273501 93 + 63644993 taatcctagctactcaggaggctaaggcgggataatcacttgaactccggaggcagaggttgcagtgagccaagatcacaccattgccttcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56130470 93 + 60714840 taatcctagctactcgggaggctgaggcaggagaatcacttgaacttgggaggcagaggttgcagtgagccaagatcatgccattgctctcca i ponAbe2.chr19 M 117 C 0 s nomLeu3.chr10 102892920 93 - 106955855 taatcctagctactcgggaggctgaggcaggagaatcacttgaactcgggaggcagaggttgcagtgagccaagatcacgccattgccctcca i nomLeu3.chr10 C 0 I 126 s rheMac3.chr19 60156767 93 + 64156825 taatcctagctattcaggaggctgaggcaggagaaccactagaactcgggaggcagaggtggcagtgagccaagatcacgccattgcactcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55255878 93 + 59248254 taatcctagctattcgggaggctgaggcaggagaaccactagaactcgggaggcagaggtggcagtgagccaagatcacgccattgcactcca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47347007 93 + 51301725 taatcctagctattcgggaggctgagccaggagaaccacttgaactcgggaggcagaggtggcagtgagccaagatcacgccattgcactcca i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45565929 93 + 49145316 caatcccagctacttgggaggctgaggcaggagaatcgcttgaaaccggaaggcagaggttgcagtgaaccaagatcaccccattgcactcca i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47037520 18727 + 50890351 I a score=29973.000000 s hg38.chr19_GL949747v2_alt 320966 16 + 729520 gcctgggcaacaagaa s panTro4.chr19 59273594 16 + 63644993 gcctgggcaacaagaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56130563 16 + 60714840 gcctgggcaacaagaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60156860 16 + 64156825 gcctgggcaacaagaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55255971 16 + 59248254 gcctgggcaacaagaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47347100 16 + 51301725 gcctgggcaacaagaa i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45566022 16 + 49145316 gcctaagcaacaagag i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e nomLeu3.chr10 102893013 126 - 106955855 I e chlSab2.chr6 47037520 18727 + 50890351 I a score=32061.000000 s hg38.chr19_GL949747v2_alt 320982 14 + 729520 caaaactctatctc s panTro4.chr19 59273610 14 + 63644993 caaaactctatctc i panTro4.chr19 C 0 I 3 s ponAbe2.chr19 56130579 14 + 60714840 caaaactccatctc i ponAbe2.chr19 C 0 I 4 s nomLeu3.chr10 102893139 14 - 106955855 CAAAACTCCATCTC i nomLeu3.chr10 I 126 C 0 s rheMac3.chr19 60156876 14 + 64156825 caaaactccatctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55255987 14 + 59248254 caaaactccatctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47347116 14 + 51301725 caaaactccatctc i papAnu2.chr19 C 0 I 2 s calJac3.chr22 45566038 14 + 49145316 cgaaatttcatccc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47037520 18727 + 50890351 I a score=3261972.000000 s hg38.chr19_GL949747v2_alt 320996 1165 + 729520 ----aaaaaaaaaaaaaaaaaGGACGTTTCCATCTCTGTGTGGCACAGAAAAGGAAGTCCAGGGTCCTCACAGACAGGGAGGAACCTAGGGCTCCAGGTGAAAGTGAGACGCTGTGGCTGCCCCTC-TTCTGTGTTTGCACATGGGCACTGCCATCTCTCTGCTTCCTTGTGGGAG-CCATGAGGGGCAGAAAGAGGAACTGCCCCTCCCCAGGAGCTTGGCTCTCATTTCCCCAGGGCTTGTCCTGGGCGTGAACACCAGGCTCTCTAGAGATATTACAGACAGAAATGGGCTCTCCCCTCACTTTGGCTGCGTCTATCTAATCTGTCCTCATCTCACCAAGGGCCAGGATGTAGCAGCAAACAGACCCGGTGCCTTCTTGATTCAGCCCCTTCCAGGTGAGAGGGACTGACGGTTCCTCCTTCCCTCTCAGAGCCTCCCCATGGAGGAGGCTCCATCTCCCC------------------------TGTGTGTGTGTGAAAAACAGGCTGTCTGTGGTATTGTCACACCTGGACATCTGTCCCACACGTGAGTGGGAGGTCACATTGGACTCCGCCTTGCCAGCCACAACTTTGGGCAGATGCTAAGTTTGGAAGAGTTGATGCTCCTGGACAGGAGCAGCTGTAACCACCCGCTCTGGACAGGCCTGATTTCTGAGTCGTCTCTGGGAGAAATGTTCTTTGTAAGATCATGTGCATGGGGGTAGAT--GGACAGCATGCAGTGTATTTGAGAAGAGATAGACAACTAGAAATTATGTAGGCAGATGTGGCTGTGGTG-AAAATAGTAGGTAGAATTAACACACTTAAAAATCAATTCTATggccgggcacggtggctcgcacctgtaatcccagcactttgggaggcccaggcgggcagatcacctgagg-tcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctatactaaaaataac-aaaaattagGCTCATTTTTGAATCCCCTTAAACATTACC-AGCCCCtaaatgtctgctctacggattcttctttgaattcagtattaacatctttcccgttccctcgttaatagtaagctaaataaaaacttgtgtccattttatccttctagaagagcaa------tttttttttacctttttg----aaaaaAAA----------AAACTTTACCAAAATATATTTAAGATCAAGAATGCTGG s panTro4.chr19 59273627 1166 + 63644993 ----aaaaaaaaaaaaaaaaaGGACGTTTCCATCTCTATGTGGCACGGAAAAGGAAGTCCAGGGTCCTCACAGACAGGGAGGAACCTAGGGCTCCAGGTGAAAGTGAGACGCTGTGGCTGCCCCTC-TTCTGTGTCTGCACATGGGCACTGCCATCTCTCTGCTTCCTTGTGGGAGCCCATGAGGGGCAGAAAGAGGAACTGCCCCTCCCCAGGAGCTTGGCTCTCATTTCCCCAGGGCTTGTCCTGGGCGTGAACACCAGGCTCTCTAGAGATATTACAGACAGAAATGGGCTCTCCCCTCACTTTGGCTGCGTCTATCTAATCTGTCCTCATCTCACCAAGGGCCAGGATGTAGCAGCAAACAGACCCGGTGCCTTCTTGATTCAGCCCCTTCCAGGTGAGAGGGACTGACGGTTCCTCCTTCCCTCTCAGAGCCTCCCCATGGAGGAGGCTCCATCTCTCC------------------------TGTGTGTGTGTGAAAAACAGGCTGTCTGTGGTATTGTCACACCTGGACATCTGTCCCACACGTGAGTGGGAGGTCACATTGGACTCCGCCTTGCCAGCCACAACTTTGGGCAGATGCTAAGTTTGGAAGAGTTGATGCTCCTGGACAGGAGCAGCTGTAACCACCTGCTCTGGACAGGCCTGATTTCTGAGTCGTCTCTGGGAGAAATGTTCTTTTTAAGATCATGTGCATGGGGGTAGAT--GGACAGCATGCAGTATATTTGAGAAGAGATAGACAACTAGAAATTATGTAGGCAGATGTGGCTGTGGTG-AAAATAGTAGGTAGAATTAATACACTTAAAAATCAATTCTATggacgggcacggtggctcaaacctgtaatcccagcactttgggaggcccaggcgggcagatcacctgagg-tcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctatactaaaaataac-aaaaattagccTcatttttgaatccccttaaacattacc-agcccctaaatgtctgctctacggattcttctttgaattcagtattaacatctttcccgtccccttgttaatagtaagctaaataaaaacttgtgtccattttatccgtctagaagagcaa------tttttttttacctttttg----aaaaaAAA----------AAACTTTACCAAAATATATTTAAGATCAAGAATGCTGG i panTro4.chr19 I 3 C 0 s ponAbe2.chr19 56130597 1169 + 60714840 ----aaaaaaaaaaaaaagaaGGACATTTCCACCTCTATGTGGCACAGAAAAGGAGGTCCGGGTTCCTCACAGACAGTGAGGAATC-AGGACTCCAGGTGAAGGTGGGATGCTGTGGCTCCCCCCCGTTCTGTGTTTACACATGGGCACTGCCATCTCTCTGCTTCCTTGTGGGAGCCCATGAGGGGCAGAAAGAGGAACTGCCCCTCTCCAGGAGCCCGGCTCTCATTTTCCCAGGGCTTGTCCTGGGGGTGAACACCAGGCTTTCTGGAGATATTACAGACAGAAATGGGCTCTCCCCTCACTTTGGCTGCATCTATCTAATCTGTCCTCATCTCACCAAGGGCCAGGATGTAGCAGCAAACAGACCCGGTGCCTTCTTGATTCACCCCCTTCCAGGTGAGAGGGACTGACGGCTCCTCCTTCCCTCTCAGAGCCTCCCCATGGAGGAGGCTCCATCTCCCC--------------------------TGTGTGTGTGAAAAACAGGCTGTCTGTGGTATTGTCACACCTGGACATCTGTCCCACACATGAGTGGGAGGTCACATTGGACTCCGCCTTGCCAGCCACAACTTTGAGCAGATGCTAAGTTTGGAAGAGTTGATGCTCCTGGATAGGAGCAGCTGCAACCACCCCCTCCGGACAGGCCTGATTTCTGAGTTGTCTCTGGGAGAAATGTTCTTTATAAGATCACGTGCATGAGGGTAGAT--GGACAGCATGCAGTATATTTGAGAAGAGATAGCCAACTAGAAACTACACAGGCAGATGTTGCTGTCGTGAAAAATAGTAGGTAGAATTAACACACTTAAAAATCCATTCTATggccgggcacggtgactcacgccagtaatcccagcactttgggaggcccaggcaggcagatcacctgagg-tcaggagttcaagaccagcctggccaacatggtgaaaccccatctctatactaaaaataac-aaaaattagccT-ATTTTTGAAACCCCTTAAACATTACC-AGcccataaatgtctgctctttggattagtctttgaattcagtattaacatctttcccgttccctcgttaatagtaagctaaataaaaacttgtgtccattttatccttctagaagagtaa----tttttttttttatctttttg-gaaaaAAAAAA----------AAACTTTACCAAAATATATTTAAGATCAAGAATGCTGG i ponAbe2.chr19 I 4 C 0 s nomLeu3.chr10 102893153 1170 - 106955855 -------AAAACAAAAAAGAAGGACGTTTCCACCTCTATGTGGCACAGAAAAGGAAGTCCAGGTTCCTCACAGACAGGGAGGAACC-AGGGCTCCAGGTGAAGGTGGGACGCTGTGGCTCCCCCTC-TTCCATGTTTGTACATGGGCACCGCCATCTGTCTGCTTCCTTGTGGGAGCCCATGAAGGGCAGAAAGAGGAACTGCCCCTCCCCAGGAGCCCGGCTCTCATTTCCCCAGGGCTTGTCCTGGGGGTGAACACCAGGCTCTCCGGAGATATTACAGCCAGAAATGGGGTCTCCCTTCACTTTGGCTGCATCTGTCTAATCTGTCCTCCTCTCACCAAGGGCCAGGACGTAGCAGCAAACAGACCCGGTGCCTTCTTGATTCAGCCCCTTCCAGGTGAGAGGGACTGACGGCTCCTCCTTCCCTCTCAGAGCCTCCCCGTGGAGGCGGCTCCATCTCCCC------------------------TGTGTGTGTGTGAAAAACAGGCTGTCTGTGGTATTGTCACACCGGGACATCTGTCCCACACATGAGTGGGAGGTCACATTGGACTCCGCCTTGCCAGCCGCAACCTTGGGCAGATGCTAAGTTTGGAAGAGTTGATGCTCCTGGACAGGAGCAGCTGCAACCACCCCCTCTGGACAGGCCTGATTTCTGAGTCGTCTCTGGGAGAAATGTTCTTTGTAAGATCATGTGCATGGGGGTACAT--GGACAGCATGCAGTATATTTGAGAAGAGATAGCCAACTAGAAATTATGTAGGCAGACGTTGCTGTGGTGAAAAGTAGTAGGTAGAATTAACACACTTAAAAATCAATTCTATggccgggcacagtggctcatgcctgtactcccagcactttgggaggcccaggcaggtggatcacctgagg-tcaggagttcaagaccagcctggccaacatggtgaaaccccatctctatactaaaaataac-aaaaattagccTCatttttgaatccccttaaacattacc-agcctataaatatctgctctttggattattctttgaattcagtattaacatctttcccatttcctcgttaatagtaagctaaataaaaacttgtgtccattttaaccttctagaagagtaa---ttttttttttttacctttttgaaaaaAAAAAAA----------ACACTTTACCAAAATATATTTAAGATCAAGAATGCTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60156890 1179 + 64156825 ---------aaaaaaaaaaaaGGACATTTCCACCTCTATGTGGCACAGCACAGGAAGTCCAGGTTCCTCACAGACAGGGAGGAACC-AGGGATCCAGGAGAAGGTGGGACGCTGTGGTTCCCCCTC-TTCCATGTTTGTAGATGGGCACTACCATATCTCTGCTTCCTGGTGGGAGCCCATGAGGGGCAGAAAGAGGAACTGCCCCTCCCCAGGAGCCCAGCTCTCATTTCCCCAGGGCTTGTCCTGGGGGTGAACACCAGGCTCTCTGGAGATATTACAGACAGAAATGAGCTCTCCCCTCACTTTGGCTGCATCTATCTGATCTGTCCTTGTCTCACCAAGGGCCAGGATGTAGCAGCAAATGGACCCGGAGTCTTCCTGATTCAGCCCCTTCCAGGGTAGAGGGACTGACGGCTCCTCCTTCCCTCTCAGAGCCTCCCCATGGAAGAGGCTGCATCTCCCC--------------------TGTGTGTGTGTGTGTGAAAAACAGGCTGTCTGTGGTATTGCCACACCTGGACATCTGTCCCACGTGTGAGTGGGAGGTCACATTGGACTCCGCCTTGCCAGCCACAACCTTGGGCAGATGCTAAGTTTGGAAGAGTTGATGCTCCGGGACAGCAGGAGCTGCAACCATCCCCTCGGGACAGGCCTGATTTCTGAGCCATCTCTGGGAGAAGTGTTCTTTGTAAGATCTTGTGCATGGGGG-AGAC--GGACAGCATGCACTATATTTGAGAAGAGATAGCCGACTAGAAATTACATAGGCAGATGTTGCTGTGGTGAAAAGTAGTGGGTAGAATTAACACACTTAAAAATCAATTCTATggccgggcacggtggctcacgcctgtaatcccagcactttgggaggcccaggcaggacaatcacctgaga-tcaggaattcaagaccagcctggccaacatgatgaaaccccatctctatactaaaaataac-aaaaattagccTCatttttgaatccccttaaacattacc-agcctgtaaatgtctgccctttggattattctttgaattcagtattaatatttctcccattcccttgttaatagtaagctaaataaaaacttgtgcccattttatccttctagaagagtaa----tttttttttttacctttttg-gaaaaAAAAAAAAAAAGAAAGAAACTTTACCAGAATATATTTAAGATCAAGAATGCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55256001 1161 + 59248254 ---------aaaaaaaaaaaaGGACATTTCCACCTCTATGTGGCACAGCACAGGAAGTCCAGGTTCCTCACAGACAGGGAGGAACC-AGGGATCCAGGAGAAGGTGGGACGCTGTGGTTCCCCCTC-TTCCATGTTTGTAGATGGGCACTGCCATATCTCTGCTTCCTGGTGGGAGCCCATGAGGGGCAGAAAGAGGAACTACCCCTCCCCAGGAGCCCAGCTCTCATTTCCCCAGGGCTTGTCCTGGGGGTGAACACCAGGCTCTCTGGAGATATTACAGACAGAAATGAGCTCTCCCCTCACTTTGGCTGCGTCTATCTAATCTGTCCTTGTCTCACCAAGGGCCAGGATGTAGCAGCAAATGGACCCGGAGTCTTCCTGATTCAGCCCCTTCCAGGGGAGAGGGACTGACGGCTCCTCCTTCCCTCTCAGAGCCTCCCCATGGAAGAGGCTGCATCTCCCC--------------------TGTGTGTGTGTGTGTGAAAAACAGGCTGTCTGTGGTATTGCCACACCTGGACATCTGTCCCACGTGTGAGTGGGAGGTCACATTGGACTCCGCCTTGCCAGCCACAACCTTGGGCAGATGCTAAGTCTGGAAGAGTTGATGCTCCTGGACAGCAGGAGCTGCAACCATCCCCTCGGGACAGGCCTGATTTCTGAGCCATCTCTGGGAGAAGTGTTCTTTGTAAGATCTTGTGCATGGGGG-AGAC--GGACAGCATGCACTATATTTGAGAAGAGATAGCCGACTAGAAATTACATAGGCAGATGTTGCTGTGGTGCAAAGTAGTGGGTAGAATTAACACACTTAAAAATCAATTCTATggccgggcacggtggctcacgcctgtaatcccagcactttgggaggcccaggcaggtgaatcacctgaga-tcaggaattcaagaccagcctggccaacatgatgaaaccccatctctatactaaaaataac-aaaaattagccTcatttttgaatccccttaaacattacc-agcctataaatgtctgctctttggattattctttgaattcagtattaatatttttcccgttcccttgttaatagtaagctaaataaaaacttgtgtcca---------tctagaagagtaa---ttttttttttttacctttttg-aaaaaAAAAAA----------AAACTTTACCAAAATAAATTTAAGATCAAGAATGCTAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47347132 1179 + 51301725 ----aaaaaaaaaaaaaaaaaggacatttccACCTCTATGTGGCACAGCAAAGGAAGTCCAGGTTCCTCACAGACAGGGAGGAACC-AGGGATCCAGGGGAAGGTGGGACGCTGTGGTTCCCCCTC-TTCCATGTTTGTAGATGGGCACTGCCATATCTCTGCTTCCTGGTGGGAGCCCATGAGGGGCAGAAAGAGGAACTGCCCCTCCCCAGGAGCCCAGCTCTCATTTCCCCAGGGCTTGTCCTGGGGGTGAACACCAGGCTCTCTGGAGATATTACAGATAGAAATGAGCTCTCCCCTCACTTTGGCTGCGTCTATCTAATCTGTCCTTGTCTCACCAAGGGCCAGGATGTAGCAGCAAACAGACCCGGGGTCTTCCTGATTCAGCCCCTTCCCGGTGAGAGGGACTGACggctcctccttccctctcagaGCCTCCCCATGGAGGAGGCTGCAtctcccc----------------tgtgtgtgtgtgtgtgtgtgaaaaacaGGCTGTCTGTGGTATTGCCACACCTGGACATCTGTCCGACGTGTGAGTGGGAGGTCACATTGGACTCCGCCTTGCCAGCCATGACCTTGGGCAGATGCTAAGTGTGGAAGAGTTGATGCTCCGAGACAGTAGGAGCTGCAACCATCCCCTCGGGACAGGCCTGATTTCTGAGCCATCTCTGGGAGAAGTGTTCTTTGTAAGATCTTGTGCATGGGGG-AGAC--GGACAGCATGCAGTATATTTGAGAAGAGACAGCTGACTAGAAATTACATAGGCAGATGTTGCTGTGGTGAAAAGTAGTGGGTAGAATTAACACACTTAAAAATCAATtctatggccgggcacggtggctcacacctgtaatcccagcactttgggaggcccaggcgggtgaatcacctgaga-tcaggaattcaagaccagcctggccaacatgatgaaaccccatctctatactaaaaattttaaaaaattagcctcaTTTTTTAATCCCCTTAAACATTACC-AGCCTATAAATGTCTGCTCTTTGGATTATTCTTTGAATTCAGTATTAATATTTTTCCCGTTCCCTTGTTAATAGTAAGCTAAATAAAAACTTGTGTCCATTTTATCCTTCTagaagagtaa----tttttttttttacctttttg-gaaaaaaaaaa----------aaactttaccaaaataaatttaagatcAAGAATGCTAG i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47056247 1176 + 50890351 ----aaaagaaaaaaaaagaaGGACATTTCCACCTCTATGTGGCACAGCAAAGGAAATCCAGGTTCCTCACAGACAGGGAGGAACC-AGGGATCCAGGTGAAGGTGGGACGCTGTGGTTCCCCCTC-TTCCATGTTTGTAGAGGGGCACTGCCAGATCTCTGCTTCCTGGTGGGAGCCCATGAGGGGCAGAAAGAGGAACTGCCCCTCCCCAGGAGCCCAGCTGTCATTTCCCCAGGGCTTGTCCTGGGGGTGCACACCAGGCTCTCTGGAGATATTACAGACAGAAATGAGCTCTCCCCTCACTTTGGCTGCGTCTATCTAATCTGTCCTTGTCTCACCAAGGGCCAGGATGTAGCGGCAAACAGA-----------------------CCTTCCCGGTGACAGGGACTGACGGCTCCTCCTTCCCTCTCAGAGCCTCCCCGTGGAGGAGGCTGCATCTCCCCTCtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgAAAAACAGGCTGTGTGTGGTATTGCCACACCTGGACATCTGTCCCACGTGTGACTGGGAGGTGACATTGGACTCCGCCTTGCCAGCCACAACCTTGGGCAGATGCTAAGTTTGGAAGAGTTGATGCTCCTGGACAGTAGGAGCTGCAACCATCCCCTTGGGACAGGCCTGATTTCTGAGCCATCTCTGGGAGAAGTGTTCTTTGTAAGATCTTGTGCATGGGGG-AGAT--GGAGAGCATGCCGTATATTTGAGAAGAGATAACCGACTAGAAATTACATAGGCAGATGTTGCTGTGGTGAAAAGTAGTGGGTAGAATTAACACACTTAAAAATCAATTCTATggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggcccaggcgggtgaatcacctgaga-tcaggaattcaagaccagcctggccaacatgatgaaattccatctctatactaaaaataaa-aaaaattagccTCGTTTTTGAATCCCCTTAAACATTACC-AGcctataaatgtctgccctttggattattctttgaattcagtattaatagttttcccgttcccttgttaatagtaagctaaataaaaacttgtgcccattgtatccttctagaagagtaatttttttttttttttacctttttg-ggaaaAAAAAAA---------AAACTTTACCAAAATAAATTTAAGATCAAGAATGCTGG i chlSab2.chr6 I 18727 C 0 s calJac3.chr22 45566052 1151 + 49145316 aaaaagaaagaaagaaagaaagGACATTTCCATCTCTGTGGGGGACAGAAAAGGAAGTCCAGGTTCCTGACAGATAGGGAGGAACC-AGGGCTCCAGGTGAAGGTGGGAAGCTGTGCCCTGGCATC-TTC--TGTTTGTACATGGGCACTACCGTATCTCTGCTTGCTGGTGGGAGCCCATGAGGGGCAGAAAGAGGAACTGCCCCTCCCCGGGAGCCTGGCTCTCATTTCCCCAGGGCTTGTTCTGGGAGTGAGCACCAGGCTCTCTGGAGCTATT--AGTCAGAAATGGGGTCTCCCCTCACCTTAGCTG---CTGTCCAATCTGTCCTCATCTCACCAAGGGCCAGGATGTGGCAGCAAATAGACCCGCTGCCTTCCTGAGTCACCCCCTTCCAGGCGAGACAGATTGACAGCTCCTCCTTCCCTCTCAGAGCCTCCCCACAGAGAAGGTTCCGTCTCCGT-----------------GTGTGTGCGCGCGTGTGTGAAAAACA----GTCTGTGGTATTGTCACACCTGGAAGTCT-TCCCACGTGTGGCTGGGAGGTCACACTGGACTCTGCCTTGACAGCTACAGCCTTGAGAAGATGCTAAGTTTAGAAGAGCTGATTTTCCTAGACAGAAGCAGCTCCCACAATCCCCTCTGGACAGGTCTGATTTCTGAGTCACGTCTGGGAGAAATGTTCTTCGTAAGATCATGTGCATGGGGGAAGATGGGGACAGCATGCAGCATATTTGAGAAGAGACAGCCAACTAGAAATTATGTAGGCAGATGCTGTGGTGGTGAAAAGTAGTAGGTTTAATTAACGCTCTTAAAAATCAATTCTATggccaggcacgatggctcat-cctgtattctcagcactttggaaagcccaggagggtagatcacctgaggttcagaagtttgagaccagcctggccaacagggtgaaaccctgtctctacactaaaaat-gc-aaaaattagccTTATTTTTGAACTCCTTTAAACATGACCAAACATCTCAACGTCTGCTCTTTGCATTCTTC--------AAGTATTAACATCGCTCCAGTTCCCGCATTAAG-------TTAATAAAAACGTGTGCACATTTTATCCTTGTACAACAGGAA-------TTTTTTTTACCTTTTTG----TAAAACAA----------AAACTTTACCAAAATATATTTAAGATAAAAAATGCTGg i calJac3.chr22 C 0 I 298 e canFam3.chr1 19746457 10348 - 122678785 I a score=3151877.000000 s hg38.chr19_GL949747v2_alt 322161 1465 + 729520 TCATAAGCTGTGAAAATCTATGTCTTGTCTTAATCattccatcagcat-aaaaaatgtagcaatgcatgtgaagtgttggttccaggcaaacctgcttaagactcaatgttcaaggttgttattaggt-gggggccatataggcaTAATGGTCAGTCACAGGGAAACCAGGGAAAAGCTGCTGTTCATCAGCATTTTTT------TTTTTTTT----ACAAACTCATCAACAGTGAGCTACATTGTTTGCGGAAAT-GGCCTAGTCAAGACACAGTAGAATTCAGTGCTGCAGTCACACAACACCAGCTTATCTCTTAGGAACATAGGGAACATTCCAGGAGCCATGTTTAGGAACTAGATGCCAGCTAAGGACCAACTTTACAAGCAAACTCTCCCAACGTTATCACCCTTGCAGCTGTGAGATTAACTCCTTCTTGCACA-CCTGTACCTGAAAAAAATAATAGTCCTCTTGAATGCAGCAGCACCTTGTTCACCCGGAACATGCCTCC-GCTCCTCCAGATTCTTCCCGCCCTATCTCAG-TTTTTTTCTGCAGATTCTCCAAGGTTCTGCAAACTGTAAGCAGTAAATCCACACTCAACTTGAGTTTTCATGAGGGAAGCCGTCTGGGGCCTTCTCTGGCTGTGCTGAGCCTGAACGAGCATCCCCCAGAGGCCACCGGGATCAACACAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGGCTGGAGGGGCGTGGTCAGTAGACAGAATGGAGCATTTGCTGAGGGC-TAGACTGGCCACACTCACCTCGGAAGCCCTGGATGGGTGTTTACACATCTACACTCTGGAAAGGGGAGTCCCAGTTATTCCTCACTATGGGTCTATACTTGGTGGAGGTTGGTTGAGAGGATCAGGGACTCtgtatgcgtctgttctcactctgctatgaagaactacccaagactgggtaatttataagaaaagacgtttaattgactcacagttccatatgtctggggaggcctcatgaaacttacaatcatggtggaaggcacctctt-attgggcggcaggagagagaatgagagtggagcgaagggggaagccccttataaaaccattagatctcatgagaactcactcattatcacgagaacagtacaggggaaacc----gcccccatgattcaataatctccacctggtcctgcccttgacatgtggggattattataatccaaggtgggatttgggtggagacacagaacc--------------------------------------------------------------------------------------------------------------------------gaaccatatcaGACACCTATGAATAAGAATGAGGTGGGGCATGAGTAGCCAGACCACCATTGTATCCCCCGACCAGGGCGTATAACCCACCATTGTATCC-CCCAACCAGGGCACATAACCCACCATTGTAT-CCCCCCC-AGGGCGTGTA----------------------------------ACCATTGTATCC-CCCCACCAGGGCATGTAACCCACCATTGTATCCTCCCCA-------------------------CCTCCAGGGCATGTAACCCACCACTGTATCC-----------------------------------C s panTro4.chr19 59274793 1403 + 63644993 TCATAAGCTGTGAAAATCTATGTCTTGTCTTAATCattccatcagcat-aaaaaatgtagcaatgcatgtgaagtgttggtttcaggcaaacctgcttaagactcaatgttcaaggttgttattaggt-gggggccatataggcaTAATGGTCAGTCACAGGGAAACCAGGGAAAAGCTGCTGTTTATCAGCATTTTTT------TTTTTTTT----ACTAACTCATCAACAATGAGCTACATTGTTTGCAGAAAT-GGCCTAGTCAAGACACAGTAGAATTCAATGCTGCAGTCACACAACACCAGcttatctcttaggaacatagggaacattccaggagccatgtttaggaactagatgccagctaaggaccaactttacaagaaaaccctcccaacgttatcacccttgcagctgtgagattaactccttcttgcacaCCCTGTACCTGAAAAAAATAATAGTCCTCTTCAATGCAGCAGCACCTTGTTCACCTGGAACATGCCTCCGGCTCCTCCAGATTCTTCCCGCCCTATCTCAG-TTTTTTTCTGCAGATTCTCCAAGGTTCTGCAAACTGTAAGCAATAAATCCACACTCATCTTGAGTTTTCATGAGGGAAGCCGTCTGGGGCCTTCTCTGGCTGTGCTGAGCCTGAACGAGCATCTCCGAGAGGCCACCAGAATCAACGCAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGTCTGGAGGGGCGTGGTCAGTAGACGGAATGGAGCATTTGCTGAGGGC-TAGACTGGCCACACTCACCTCGGAAGCCCTGGATGGGTGTTTACACATCTACATTCCAGAAAGGGGAGTCCCAGTTATTCCTCACTATGGGTCTATACTTGGTGGAGGTTGGTTGAGAGGATCAGGGACTCtgtatgagtctgttctcactctgctatgaagaactacccaagactgggtaatttataagaaaagacgtttaattgactcacagttccacatgtctggggaggcctcatgaaacttacaatcatggtggaaggcacctctt-attgggcggcaggagagagaatgagagtggagcgaagggggaagccccttataaaaccatcagatctcgtgagaactcactcgttatcgcgagaacagtacaggggaaacc----gcccccatgattcaataatctccacctggtcctgcccttgacatgtagggattattataatccaaggtgggatttgggtggagacacagaacc--------------------------------------------------------------------------------------------------------------------------gaaccatatcaGACGCCTATGAATAAGAATGAGGTGGGGCATGAGTAGCCAGACCACCATTGTATCCCCCCACCAGGCCGTATAACCCACCATTGTATCC-CCCCACCAGGGCACCTAACCCACCATTGTAT-CCCCTCA-----------------------------------------------------------------------------------------------------------------------------CCAGGGCATGTAACCCACCACTGTATCC-----------------------------------C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56131766 1397 + 60714840 TCATAAGCTGGGAAAATCTGTGTCTTGTCTTAATCattccatcagcataaaaaaatgtagcaatgcatgtgaagtgttggttccgggcaaacctgctcaagactcaatgttcaaggttgttattaggt-ggggaccatataagcaTAATGGTCAGTCGCAGGGAAACCAGGGAAAAGCTAGTGTTCATCAGCATTTTTT------TTTTTTTT----ACTAGCTCATCAACAACGAGCTGCATTGTTTGCAGAAACGGGCTTGGTCAAGACACGGTAGAATTCAATGCTGCAGTCACAGAACACCAGCTTATCTCTTAGGAACATAGGGAACATTCCAGGAGCCATATTTAGGAActagatgcccgctaaggaccaactttgcaagcaaaccct-ccaacgttatcacccttgcagctgtgagattaactccttcttacacaCCCTGCACCTGAAAAAAATGATAGTCCTCTTGAGTGCAGCAGCACGGTGTTCACCCGGAACACGGCTCCAGCTCCTCCAGATTCTTCCGGCCCTATCTCAG-TTTTTTTCTGCAGATTCTCCAAGGTTCTGCAAACTGTAAGTAGTAAATCCACACTCATCTTGAGTTTTCATGAGGGAAGCCATCTGGGGCCTTCTCTGGCTGTGCTGAGCCGGAACGAGCATGCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCACTGGGAAGAGATTCTCCATGGCAGAGTCTGGAGGGGCGTGGTCAGTAGACAGAATGGAGCATTTGCTGAGGGC-CAGACTGGCCACACTCACCTTGGAAGCCCTGGATGGGTGTTTACACATCTACACTCCCAAAAGGGGAGTTCCAGTTATTCCTCACTATGGGTCTCTACTTGGTGGAGGATGGTTGAGAGGATCAGGGACTCtgtacgagtctgttctcactctgctatgaagaactacccaagactgggtaatttataagaaaagaggtttagttgactcacagttccacatgtctggggaggcctcatg------------atggtggaagacacctcttcatagggcggcaggagagagaatgagagtggaacgaagggggacgccccttataaaaccatcagatctcgtgagaactcactcattatcacgagaacagtacaggggaaacc----gcccccatgattcaataatctccacctggtgccgcccttgacacgtggggattattataatccaaggtgggatttgggtggagacacagagcc--------------------------------------------------------------------------------------------------------------------------gaaccatatcaGACGCCAAAGAATAAGAATGAGGTGGGGCATGAGTAGCCAGACCACCATCGTATCCCCCCACTAGGGTGTATAACCCACCATTGTATCC-CCCCACCAGGGCACGTAACCCACCTTTGTAT-CC------------------------------------------------------------------------------------------------TCCCCA-------------------------CCTCCAGGGCATGTAACCCACCACTGTGTCC-----------------------------------C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102894323 1541 - 106955855 TCATAAGCTGTGAAAATCTGTGTCTTGTCTTAGTCattccatcagcataaaaaaatgtggcaatgcatgtgaagtgttggttgcaggcaaacctgcttaagactcaatgttcaaggtcgttattaggt-gggggccatatgggcaTAATGGTCAGTCACAGGGAAACCAGGGAAAAGCTGGTGTTCATCAGCA---TTT------TTTTTTTT----ACTAGCTCATCAACAGTGAGCTACATTGTTTGCAGAAAT-AGCCTAGTCGAGACACAGCAGAATTCAATGCTGCAGTCACACAACACCAGCTTATCTCTTAGGAACA-AGGGAACATTCCAGGATCCATGTTTAGGAACTAGATGCCAGCTAAGGACCAACTTTACAAGCAAACCCTCC--------------------CTGTGAGATTAACTCCTTCTTGTACACCCTGCACCTGAAAAAAATAATAGTCCTCTTGAATGCAGCAGCACGGTATTCACCCGGAACATGCCTCCAGCCCCTGCAGATTCTTCCGGGCCTATCTCAG-TTTTTTTCTGCAGATTCTCCAAGGTTCTGCAAACTGTAAGTAGTAAATCCACACTCATCTTGAGTTTTCATGAGGGAAGCCATCTGGGGCCTTCTCTGGCTGTACTGAGCCTGAACGAGCATCCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCATTGGGATGAGATTCTCCACGGCAGAGTCTGGAGGGGCGTGGTCACTAGACAGAATGGAGCATTTGCTGAGGGC-TAGACTGGCCACACTCACCTCGGAAGCCCTGGATGGGTGTTTACACATCTACACTCCCGAAAGGGGAGTTTCAGTTATTCCTCACTATGAGTCTACACTTGGTGGAGGATGGCTGAGAGGATCAGGGACTCtgtacgagtctgttctcactctgctgtggagaactatccaagactgggtaattgataagaaaagaggtttagttgactcacagttccacatgcctggggaggcctcatgaaacttacaatcatggtggaagacacctctttatagggcggcag----gagaatgagagtggagcgaagggggaagccccttataaaaccatcagatctcgtgagaactcactcactatcacgagaacagtatgggggaaaccaactgcccccatgattcaataatctccacctggtcccactcttgacatgtggggattattacaattcaaggtgggatttgggtagagacacacagcc--------------------------------------------------------------------------------------------------------------------------gaaccatatcaGACGCCTATGAATAAGAATGAAGTGGGGCATGAGTAGCCAGACCACCACTATATCCCCCCACCAGGGCGTGTAACCCACCATTGTATCCTCCCCACCAGGGCGTGTAACCCACCATTTTAT-CCCCCTC-AGGGTGTGTAACCCACCACTGTATCCTCCCAGGGCGTGTAACCCACCATTGTATCCTCCCCACCAGGGTGTGTAACCCACCATTTTATCCCCCTCAGGGTGTGTAACCCACCATTTTATCCCCCTCAGGGTGTGTAACCCACCATTGTATCCTCCCCACCAGCGTGTGTAACCCACCATTGTATCCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60158069 1552 + 64156825 TCATAAGCTGTGAAAATCTGTGTCTTGTCTTAACCattccatcagcat-aaaaaatgtagcaacacatgtgaagtgttggttccaggcaaacctgcttaagactcaatgttcaaggttgttattaggtgggggaccatataggcaTAAGGGTCAGTCACAGGGAAACCAGGGAAAAGCTGGTGTCCGCCAGCTtttttttttttatttttatttttaACTAGCTCATCAACAGTGAGCTACACTGTTTGCAGAAAC-AGCCTAGTCAAGACACAGCAGAATTCAATGCTGCAGTCACACAACCCCAGTttatctcttaggaacgtagggaacattccaggagccatgtttaggaactagatgccagctcaggaccacctttacaagcaaaccctcccaacgttatcccccttggagctgtgagattaactccttcttgcacaACCTGCACCTGAAAAAAATAACAGTCCTCTTGAATGCAGCAGTACGCTGTTCACCCAGAACATGCCTCCAGCTCCTCCAGATTCTTCCGGCCCTATCTCAG-TTTTTTTCTGCAGATTCTCCAAAGTTCTGCAAACTGTAAGTAGTAAATCCATACTCATCTTGAGTTTTCATGAGGGAAGCCATCTGGGGCCTTCTCTGGCTGTACTGAGCCTGAAGGAGCATCCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGTCTAGAGGGGCGTGGTCAGTAGACAGAATGGAGCACTTGGTGAGGGCTTAGACAGATCACACTTACCTTGGAAGCCCTGGATGGGTGTTTACACATCTACACTCTGGAAAGGGGAGTTCCAGTTATTCCTCACTGTGGGTCTATACTTGGTGGAGGATGGTTGAGAGGATCCACCACTCtgtatgagtctgttctcactctgctaggaagaactatccgagactgggtaatttacaagaaaaggggtttaattgactcacagttctacatgtctggggaggcctcatgaaactgacaatcatggtggatggcacctcttcacagggcggcaggagagagaatgagagtggagcgaagggggaagccccttataaaaccatcagatctcgtgagaactcactcactat--------cagtacagggaaaact----gcccccatgattcagtaatctccatctggtcccacccttgacaggtggtgattattacaattcaaggtgggatttgggtggggacacagagccaaaTTTc------------------------------------------tccacctggtttcatgattgatacatggggattattacaattcaaggtgagatttgggtggggacacagagctaaaccatattaGACGCCTATGAATAAGAATGAGGCGGGGCATGAGTAGCCAGGCCACCATTGTATCACCCTACCAGGGCATGTAACCCACCATTGTATCC-CCCCACCAGGGCGTGTAACCCACCACTGTAT-CCCCCACCAGGGCGTGTA------------------------------ACCCACCACTGTAT-C-CCCCACCAGGGCGTGTAACCCACCACTGTATCCCC-----------------------------CCCCCAGGGCATGTAACCCACCATTGTATCC-----------------------------------C i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55257162 1542 + 59248254 TCGTAAGCTGTGAAAATCTGTGTCTTGTCTTAATCATTCCATCAGCAT-AAaaaatgtagcaacacatgtgaagtgttggttccaggcaaaccggcttaagactcaatgttcaaggttgttattaggt-ggggaccacataggcataaGGGTCAGTCACAGGGAAACCAGGGAAAAGCTGGTGTTCACCAGCttttttt------tttttttttttAACTAGCTCATCAACAGTGAGCTACACTATTTGCAGAAAC-AGCCTAGTCAAGACACAGCAGAATTCAATGCTGCAGTCACACAACCCCAGTttatctcttaggaacgtagggaacattccaggagccatgtttaggaactagacgccagctcaggaccacctttacaagcaaaccctcccaacgttatcccccttgcaactgtgagattaactccttcttgcacaACCTGCACCTGAAAAAAATAACAGTCCTCTTGAATGCAGCAGCACGCTGTTCACCCAGAACATGCCTCCAGCTCCTCCAGATTCTTCTGGCCCTATCTCAG-TTTTTTTCTGCAGATTCTCCAAGGTTCTGCAAACTGTAAGTAGTAAATCCATACTCATCTTGAGTTTTCATGAGGGAAGCCATCTGGGGCCTTCCCTGGCTGTACTGAGCCTGAAGGAGCATCCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGTCTAGAGGGGCGTGGTCAGTAGACAGAATGGAGCATTTGGTGAGGGCTTAGACAGATCACACTTACCTTGGAAGCCCTGGATGGGTGTTTACACATCTACACTCTGGAAAGGGGAGTTCCAGTTATTCCTCACTGTGGGTCTATACTTGGTGGAGGATGGTTGAGAGGATCCACCACTCtgtatgagtctgttctcactctgctaggaagaactatccgagactgggtaatttacaagaaaagtggtttaattgactcacagttctacatgtctggggaggcctcatgaaactgacaatcatggtggatggcacctcttcacagggcggcaggagagagaatgagagtggagcgaagggggaagccccttataaaaccatcagatctcgtgaga----actcactat--------cagtacagggaaaact----gcccccatgattcagtaatctccatctggtcccacccttgacaggtggtgattattacaattcaaggtgggatttgggtggggacacagagccaaatttc------------------------------------------tccacctggtttcatgattgatacatggggattattacaattcaaggtgagatttgggtggggacacagagctaaaccatattaGACTCCTATGAATAAGAATGAGGCGGGGCATGAGTAGCCAGGCCACCATTGTATCACCCTACCAGGGCATGTAACCCACCATTGTATCC-CCCCACCAGGGCGTGTAACCCACCACTGTAT-CCCCCACCAGGGCGTGTA------------------------------ACCCACCACTGTATCC-CCCCACCAGGGCATGTAACCCACCATTGTATCCCT-----------------------------CCACCAGGGCATGTAACCCACCATTGTATCC-----------------------------------C i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47348311 1557 + 51301725 TCGTAAACTGTGAAAATCTGTGTCTTGTCTTAATCATTCCATCAGCAT-AAAAAATGTAGCAACAC--GTGAAGTGTTGGTTCCAGGCAAACCCGCTTAAGACTCAATGTTCAAGGTTGTTATTAGGTGGGGCACCACGTAGGCATAAGGGTCAGTCACAGGGAAACCAGGGAAAAGCTGGTGtttgccagctttttttttt---ttttttttttaaactagcttATCAACAGTGAGCTACACTGTTTGCAGAAAC-AGCCTAGTCAAGACACAGCAGAATTCAGTGCTGCAGTCACACAACCCCAGTTTATCTCTTAGGAACATAGGGAACATTCCAGGAGCCATGTTTAGGAACTAGATGCCAGCTCAGGACCACCTTTACAAGCAAACCCTCCCAACGTTATCCCCCTTGCAGCTGTGAGATTAACTCCTTCTTGCACAACCTGCACCTGaaaaaaaTAACAGTCGTCTTGAATGCAGCAGCACGCTGTTCACCCAGAACATGCCTCCAGCTCCTCCAGACTCTTCCGGCCctatctcagttttttttttgccGATTCTCCAAGGTTCTGCAAACTGTAAGTAGTAAATCCATACTCATCTTGAGTTTTCATGAGGGAAGTCATCTGGGGCCTTCTCTGGCTGTACTGAGCCTGAAGGAGCATCCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGTCTAGAGGGGCATGGTCAGTAGACAGAATGGAGCATTTGGTGAGGGCTTAGACAGATCACACTCACCTTGGAAGCCCTGGATGGGTGTTTACACATCTACACTCTGGAAAGGGGAGTTCTAGTTATTCCTCACTGTGGGTCTATACTTGGTGGAGGATGGTTGAGAGGATCCACCACTCTGTATGagtctgttctcactctgctagGAAGAActatccgagactgggtaatttacaagaaaagtggtttaactgactcacagttctacctgtctggggaggcctcatgaaactgacaatcatggtggaaggcacctcttcacagggcagcaggagagagaatgagagtggagcgaagggggaagccccttataaaaccatcagatctcgtgagaactcactgactatcacgagaacagtacagggaaaact----gcccccatgattcagtaaTCTCCatctggtcccacccttgacaggtggggattattacaattcaaggtgggatttgggtggggacacagagccaaatttCTCTACCTGGTTTCATgattgacacatggggattattacaattc------------------------------------------aaggtgagatttgggtggggacacagagccaaaccatatcagactcCTATGAATAAGAATGAGGCGGGGCATGAGTAGCCAGGCCACCATTGTATCCCCCCACCAGGGCATGTAACCCACCATTGTATCC-CCCCACCAGGACGTGTAACCCACCATTGTATCCCCCCACCAGGGCATGTA------------------------------ACTCACCATTGTATCC-CCCCACCAGGGCGTGTAACCCACCATTGTATCCCC-----------------------------CCACCAGGGCGTGTAACCCACCATTGTAT-C-----------------------------------C i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47057423 1443 + 50890351 TCATAAGCTGTGAAAATCTGTGTCTTGTCTTAATCATTCCATCAGCAT-AAAAAATGTAGCAACACATGTGAAGTGTTGGTTCCAGGCAAACCCGCTTAAGACTCAATGTTCAAGGTTGTTATTAGGTGGGGGACTATATAGGCATAAGGGTCAGTCACAGGGAAAGCAGGGAAAAGCTGGTGTCCACCAGCTTTTTTT------TTTTTGGTTTTAACTAGCTCATCAACAGTGAGCTACACTGTTTGCAGAAAC-AGCCTAGTCAAGACACAGCAGAATTCAGTGCTGCAGTCACACAACCCCAGTTTATCTCTTAGGAACATAGGGAACATTCCAGGAGCTATGTTTAGGAACTAGATGCCAGCTCAGGACCACCTTTACAAGCAAACCCTCCCAACGTTATCCCCCTTGCAGCTGTGAGATTAACTCCTTCTTGCACAACCTGCACCTGAAAAAAATAACAGTCCTCTTGAATGCAGCAGCACGCTGTTCCCCCAGAACATGCCTCCAGCTCCTCCAGATTCTTCCAGCCCTATCTCAGTTTTTTTTCTGCAGATTCTCCAAGGTTCTGCAAACTGTAAGTAGTAAATCCATACTCATCTTGAGTTTTTATGAGGGAAGTCATCTGGGGCCTTCTCTGGCTGTACTGAGCCTGAAGGAGCATCCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGTCTAGAGGGGCGTGGTCAGTAGACAGAATAGAATATTTGCTGAGGACTTAGACAGGCCACACTCACCTTGGAAGCCCTGGATGGGTGTTTACACATCTACACTCTAGAAAGGGGAGTTCCAGTTATTCCTCACTGTGGGTCTATACTTGGTGGAGGATGGTTGAGAGGATCAACCACTCtgtatgagtctgttctcactctgctaggaagaactatccgagactgggtaatttacaagaaaagtagtttaattgactcacagttctacctgtctggggaggcctcatgacacttacaatcatggtggaaggcacctcttcacagggcagcaggagagagaatgagagtggagcgaa-ggggaagccccttataaaaccatcagatctcgtgagaactcactcactatcacgagaatagtacagggaaaact----gcccccatgattcagtagtctccatctggtcccaccctccccaggaggggattattacaattcaaggtgggatttgggtggggacacagagcc--------------------------------------------------------------------------------------------------------------------------aaaccatatcaGACTCCTATGAATAAGAATGAGGCGGGGCATGAGTAGCCAGGCCACCATTGTATCCCCCCACCAGGGCGTGTAACCCACCATTGTATCC-CCCCACCAGGGCGTGTAACCCACCATTGTAT-C--------------------------------------------------------------C-CCCCACCAGGGCGTGTAATCCACCATTGTATCCCC-----------------------------CCACCAGGGCGTGTAACCCACCATTGTATCC-----------------------------------C i chlSab2.chr6 C 0 I 7 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I a score=56325.000000 s hg38.chr19_GL949747v2_alt 323626 31 + 729520 CCAACCAGGGTGTGTAACCCACCATTTTATC s panTro4.chr19 59276196 31 + 63644993 CCCACCAAGGTGTGTAACCCACCATTTTATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56133163 31 + 60714840 CCCACCAGGGTGTGTAACCCACCACTGTATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102895864 31 - 106955855 CCCACCAGGGTGTGTAACCCACCATTTTATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60159622 31 + 64156825 CCCACCAGGGTGTGTAACCCACCATTGTATC i rheMac3.chr19 I 1 I 3 s macFas5.chr19 55258705 31 + 59248254 CCCACCAGGGTGTGTAACCCACCATTGTATC i macFas5.chr19 I 1 I 3 s papAnu2.chr19 47349869 31 + 51301725 CCCACCAGGGCGTGTAACCCACCATTGTATC i papAnu2.chr19 I 1 I 3 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47058866 7 + 50890351 I a score=45943.000000 s hg38.chr19_GL949747v2_alt 323657 50 + 729520 CCCCTCAGGGTGTGTAACCCACCATTGTATCCCCCT-------------------------------------CCAGGGCCTGTAAC s panTro4.chr19 59276227 50 + 63644993 CCCCTCAGGGTGTGTAACCCACCATTGTATCCCCCG-------------------------------------CCAGGGCATGTAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56133194 18 + 60714840 CCCC---------------------------------------------------------------------CCAGGGCGTGTAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102895895 79 - 106955855 CCCCTCAGGGTGTGTAACCCACCATTTTATCCCCCT-------CAGGGTGTGTAACCCACCA-CTGTATCCTCCCAGGGCGTGTAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60159656 87 + 64156825 TCCACCAGGGCGTGTAACCCAGCATTGTATCCCTGCCGCCGCCCAGGGTGTGTAACTCACCATCAGTCCCCCACCAGCGTGTGTAAC i rheMac3.chr19 I 3 C 0 s macFas5.chr19 55258739 87 + 59248254 TCCACCAGGGCGTGTAACCCAGCATTGTATCCCTGCCGCCGCCCAGGGTGTGTAACTCACCATCAGTCCCCCACCAGCGTGTGTAAC i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47349903 50 + 51301725 -CCACCAGGGCGTGTAACCCACCATTGTATC------------------------------------CCCCCACCAGGGCGTGTAAC i papAnu2.chr19 I 3 I 136 s chlSab2.chr6 47058873 49 + 50890351 CCCCCCAGGATGTGTAACTCA--------------------------------------CGATCAGTCCCCCACCAGCATGTGTAAC i chlSab2.chr6 I 7 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I a score=1594761.000000 s hg38.chr19_GL949747v2_alt 323707 702 + 729520 CCACTATGCCCTGGCTCCTTCACAACTCTCCTCCCTTCTCATGGGAGAATTGTATGAGATCCTTGCTGACCCCAACTCCCAGCTTGGGCTTAGAACCCTATGGTCCCTTCCTCAAATATGTTCAGGTTCCTGGGCCTTGTTGAAGTCACAGACAACTTCTCAGCTGCAGAGATATTGCGGGTTTGG-TTTTACAACAACTCAGGGACAGAGGACAAAAATCTCCAACCTCTGGAATGCTTAACTCTGCTATTCCCTGGTCTCAGATTAGTCCCAAAATTAGTTAAACCTAAGCCTCACGCTTTGACCTCTAGTAATGCGTCAGCTGTCAGTATGGAATCCATAGATCTGCATGTGGGGCTCCTGGTGTCCCAGGGCCAGGAATATGAAGCAGCCAAAGGCTGTGACTGCCTTTTCttttctttc--------tttctttctttttttttctgagatggagtctcgctctgttgcccaggctggagtgcagtggtgcaatctcagctcactgcaagctccgcatcccggggtcacgccattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccaccatgcctggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtcttgatctcctgaccttgtgatctacccgcctctgcctcccaaagtgctgggattacagg s panTro4.chr19 59276277 707 + 63644993 CCATTATGCCCTGGCTCCTTCACAGCTCTCCTCCCTTCTCATGGGAGAATTGTGTGAGATCCTTGCTGACCCCAACTCCCAGCTCGGGCTTAGAACCCTATGGTCCCTTCCTCAAATATGTTCAGGTTCCTGGGCCTTGTTGAAGTCACAGACAACTTCTCAGCTGCAGAGATATTGCGGGTTTGG-TTTTACAACAACTCAGGGACAGAGGACAAAAATCTCCAACCTCTGGGATGCTTAACTCTGCTATTCCCTGGTCTCAGATTAGTCCCAAAATTAGTTAAACCCAAGCCTCATGCTTTGACCTCTAGTAATGCATCAGCTGTCAGTATGGAATCCATAGATCTGCATGTGGGACTCCTGGTGTCCCAGGGCCAGGAATATGAAGCAGCCAAAGGCTGTGACTGCCTTTTCTTTTCtttctttct---tttctttttttttttttctgagatggagtctcactctgttgccaaggctggagtgcagtggtgcaatctcagctcactgcaagctccgcatcccgggttcacgccattctcctgcctcagcctcctgagtagctgggactacaggtgcccgccaccatgcccgtctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtcttgatctcctgaccttgtgatccacccgcctctgcctcccaaagtgctgggattatagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56133212 706 + 60714840 TGACTATGCCCTGGCTCCTTCACAACTCTCCTCCCTTCTCATGGGAGAATTGTATGAGATCCTTGCTGACACCAACTCCCAGCTCGGACTTAGAACCCTATGGTCCCTTCCTCAAATATGTTCAGATTCCTGGGCCTTGTTGAAGTCACAAACAACTTCTCAGCTGCAGAGATATTGCGGGTTTGG-TTTTACAACAGCTCGGGGACAGAGGACAAAAATCTCCAACCTCTGGGATGCTTAACTCTGCTCTTCCCTCGTCTCAGATTAGTCCCAAAATTAGCTAAACCCAAGCCTCACCCTTTGACCTCTAGTAATGCATCAGCTGTCAAGATGGAATCCATAGATCTGCATGTGGGACTCCTGGTGTCCCAGGGCCAGGAATATGAAGCAGCCAAAGGCTGTGACTGCCttttcttttctttctttc----cttttttttttttttttttgagatggagtctcgctctgtcgcccgggctggagtgcagtggtgcaatctcggctcactgcaagctccgcatcccaggttcacgccattcgcctgcctcagcctcccaagtagctgggactaccggagcccgccaccatgcccggctaattttttgtatttttagtagggacaaggtttcactgtgttagccaggatggtcttgatctcctgaccttgtgatccgcccgcctctgcctcccaaagtgctgggattacagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102895974 707 - 106955855 CCACTATGCCCTGGCTCCTTCACAACCCTCCTCCCTTCTCATGGGAGAATTGTATGAGATCCTTGCTGACCCCAACTCCCAGCTCGGGCTTAGAACTTTATGGTCCCTTCCTCAAATATGTTCAAGTTCCTGGGCCTTGTCGAAGTCACAAACAA---CTCAGCTGCAGAGATACTGCAGGTTTGG-TTTTACAGCAACTCAGGGACAGAGGACAAAAATCTCCAACCTCTGGGATGCTTAACTTTGCTCTTCCCTGGTCTCAGATTAGTCCCAAAATTAGCTAAACCCAAGCCTCACCCTTTGACCTCTAGTAATGCATCAGCTGTCAATATGGAATCCATAGATCTGCATGTGGGACTCCTGGTGTCCCAGGGCCAGGAATACGAAGCAGCCAAAGACTGTGGCTGCCTTTTCTTTTCTttctttctttctttttttttttttttttctgagatggagtcttgctctgttgcccaggctggagtgcagtggtgcaatctcggctcactgcaagctccgcctcccaggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcacctgccaccacgtctggctaattttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtcttgatctcctgaccttgtgatccacccgcctctgcctcccaaagtgctgggattacagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60159743 700 + 64156825 CCACTATGCCCTGGCTCCTTCACA-CTCTCCTCCCTTCTCATGGGGGAATTGTATGAGATCCTTGCTGAACTCAACTCCCAGCTCAGGCTTAGAACCCTATGGTCCCCTCCTCAAATGTGTTCAGGTTCCTGGGCCTTGTTGAAGTCACAAACAACTTCTCAGCTGCAGAGATATTGCGGGTTTGGTTTTTACAACAACTCAGGGACAGAGGACAACAATCTCCAGCCTCTGGGACGCTTAACTCTGCTCTTCTCTGGTCTCAGATTAGTCTCAAAATTAGCTAAACCCAAGCCTCACCCTTTGACCTCCAGTAATGCATCACCTGTCAGTATGGAATCCATAGATCTGCATGTAGGACTCCTGGTGTCCCAGGGCCAGGACTATGAATCAGCCAAAGGCTGTGACTGCCTTTCCttgtctttc--------tt--tttttttttttttttgacaaaaagactcgctctgtcgctcaggctggagtgcagtggcgtgatctcggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggcacgtgccaccacgcctgggtaattttttgtatttttagtagagacagggcttcaccgtgttagccaggatggtcgcgatctcctgacctggtgatctgcccaccgcaccctcctaaaatgctgtgattacagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55258826 698 + 59248254 CCACTATGCCCTGGCTCCTTCACA-CTCTCCTCCCTTCTCATGGGGGAATTGTATGAGATCCTTGCTGAACTCAACTCCCAGCTCAGGCTTAGAACCCTATGGTCCCCTCCTCAAATGTGTTCAGGTTCCTGGGCCTTGTTGAAGTCACAAACAACTTCTCAGCTGCAGAGATATTGCGGGTTTGGTTTTTACAACAACTCAGGGACAGAGGACAACAATCTCCAGCCTCTGGGACGCTTAACTCTGCTCTTCTCTGGTCTCAGATTAGTCTCAAAATTAGCTAAACCCAAGCCTCACCCTTTGACCTCCAGTAATGCATCACCTGTCAGTATGGAATCCATAGATCTGCATGTAGGACTCCTGGTGTCCCAGGGCCAGGACTATGAATCAGCCAAAGGCTGTGACTGCCtttccttttctttc------------tttttttttttttttgacacaaagtctcgctctgtcgctcaggctggagtgcagtggcgtgatcttggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggcacgtgccaccacgcctggctaattttttgtatttttagtagagacagggcttcactgtgttagccaggatggtctcgatctcctgacctggtgatctgcccaccgcagcctcctaaaatgctgtgattacagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47350089 695 + 51301725 CCACTATGCCCTGGCTCCTTCACA-CTCTCCTCCCTTCTCATGGGGGAATTGTATGAGATCCTTGCTGAACTCAACTCCCAGCTCAGGCTTAGAACCCTATGGCACCCTCCTCAAACGTGTTCAGGTTCCTGGGCCTTGTTGAAGTCACAAACAACTTCTCAGCCGCAGAGATACTGTGGGTTTGGTTTTTACAACAACTCAGGGACAGAGGACAACAATCTCCAGCCTCTGGGATGCTTAACTCTGCTCTTCTCTGGTCTCAGATTAGTCTCAACATTAGCTAAACCCAAGCCTCACCCTTTGACCTCTAGTAATGCATCAGCTGTCGATATGGAATCCATAGATCTGCATGTAGGACTCCTGGTGTCCCAGGGCCAGGACTCTGAATCAACCAAAGGCTGTGgctgcctttccttttct---------------ttttttttttttgttgacatgaagtctcgctctgtcacccaggctggagtgcagtggcgttgtcttggctcactgcaacctctgcctaccaggttcaagtaattctcctgcttcagcctcctgagaagctggtattacaggcacgtgccaccacgcctggctaattttttgtatttttagtagagacagggcttcaccgtgttagccaggatggtctcgatctcctgacctggtgatctgcccacctcggtctcccaaagtgctgtgattacagg i papAnu2.chr19 I 136 C 0 s chlSab2.chr6 47058922 698 + 50890351 CCACTATGTCCTGGCTCCTTCACA-CTCTCCTCCCTTCTCATGGGGGAATTGTATGAGATCCTTGCTGAACTCACCTCCCAGCTGAGGCTTAGAACCCTATGGCACCCTCCTCAAATGTGTTCAGGTTCCTGGGCCTTGTTGAAGTCACAAACAACTTCTCAGCTGCAGAGATATTGCGGGTTTGGTTTTTACAACTATCCAGGGACAGAGGACAACAA-CTCCAGCCTCTGGGATGCTTAACTCTGCTCTTCTCTGGTCTCAGATTAGTCTCAACATTAGCTAAACCCAAACCTCACCCTTTGACCTCCAGTAATGCATCAGCTGTCAGTATGGAATCCATAGATCTGCATGTAGGACTCCTGGTGTCCCAGGGCCAGGACTGTGAATCAGCCAAAGGCTGTGGCTGCCtttccttttctttc--------t---ttttttttttttgttgacacgaagtctcgctctgtcgcccaggctggagtgcagtggcgtgatcttggctcactgcaacctccgcctcccgggttcaaacaattctcctgcctcagcctcctgagtagctgggattacaggtacgtgccaccatgcccggctaattttttgtatttttagtagagacagggcttcaccgtgttagccaggatggtctcgatctcctgacctggtgatctgcccaccgcagcctcccaaagtgctgtgattacagg i chlSab2.chr6 C 0 I 9 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I a score=24731.000000 s hg38.chr19_GL949747v2_alt 324409 16 + 729520 tgtgagccactgtgcc s panTro4.chr19 59276984 16 + 63644993 cgtgagccaccatgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56133918 16 + 60714840 cgtgagccaccatgcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102896681 16 - 106955855 tgtgagccaccatgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60160443 16 + 64156825 cataagccaccgtgcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55259524 16 + 59248254 cataagccaccgcgcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47350784 16 + 51301725 cataagccaccgcgcc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47059620 9 + 50890351 I a score=3245.000000 s hg38.chr19_GL949747v2_alt 324425 6 + 729520 tggcc--t s panTro4.chr19 59277000 8 + 63644993 tggccttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56133934 6 + 60714840 tggcc--t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102896697 6 - 106955855 cggcc--t i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55259540 6 + 59248254 cagcT--T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47350800 6 + 51301725 cagct--t i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47059620 9 + 50890351 I e rheMac3.chr19 60160459 0 + 64156825 C a score=910.000000 s hg38.chr19_GL949747v2_alt 324431 1 + 729520 t s panTro4.chr19 59277008 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56133940 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102896703 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47350806 1 + 51301725 t i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47059620 9 + 50890351 I e macFas5.chr19 55259546 0 + 59248254 C e rheMac3.chr19 60160459 0 + 64156825 C a score=3438.000000 s hg38.chr19_GL949747v2_alt 324432 11 + 729520 atttttttttt s panTro4.chr19 59277009 11 + 63644993 ttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56133941 11 + 60714840 ttttttttttt i ponAbe2.chr19 C 0 I 510 s nomLeu3.chr10 102896704 9 - 106955855 ttttttttt-- i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47059620 9 + 50890351 I e papAnu2.chr19 47350807 0 + 51301725 C e macFas5.chr19 55259546 0 + 59248254 C e rheMac3.chr19 60160459 0 + 64156825 C a score=47474.000000 s hg38.chr19_GL949747v2_alt 324443 182 + 729520 ggtcagggagtcttgctctgtcgcccaggctggagtgcagtggtgcgatctcagctcactgcaacctccgcctcccgggttcaagcgattctgctgcctcagcctcctgagtagctgggactacaggcatgtgccaccatacctgactaattttctgtatttttagtacagatgggacttca s panTro4.chr19 59277020 182 + 63644993 tggcagggagtcttgctctgtcgcccaggctggagtgcagtggtgcgatctcagctcactgcaacctccgcctcccagattcaagtgattctcctgcctcagcctcctgagtagctaggactgcaggcatgtgccaccatgcctaactaattttctgtatttttagtacagatgggacttca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102896713 181 - 106955855 -ggcagggagtcttgctctgtcgcccaggctagagcacagtggtgcaatctcagctcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcctgagtagctgggactataggcatgtgccaccatgcctggctaattttctgtgtttttagtacagatgggacttca i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e ponAbe2.chr19 56133952 510 + 60714840 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47059620 9 + 50890351 I e papAnu2.chr19 47350807 0 + 51301725 C e macFas5.chr19 55259546 0 + 59248254 C e rheMac3.chr19 60160459 0 + 64156825 C a score=6823.000000 s hg38.chr19_GL949747v2_alt 324625 77 + 729520 tgttagccaggatggtctcgatctcctgaccccattatccgcttgcctcggccccccaaagtgctgggattacaggc s nomLeu3.chr10 102896894 77 - 106955855 tgttagccaggatggtctcgatctcctgactctgtgatccgcttgcctcggccccccaaagtgctgggattacaggc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e ponAbe2.chr19 56133952 510 + 60714840 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47059620 9 + 50890351 I e papAnu2.chr19 47350807 0 + 51301725 C e macFas5.chr19 55259546 0 + 59248254 C e rheMac3.chr19 60160459 0 + 64156825 C e panTro4.chr19 59277202 0 + 63644993 C a score=1392.000000 s hg38.chr19_GL949747v2_alt 324702 7 + 729520 ctgagcc s nomLeu3.chr10 102896971 7 - 106955855 ctgagcc i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47059629 7 + 50890351 ccgcgcc i chlSab2.chr6 I 9 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e ponAbe2.chr19 56133952 510 + 60714840 I e calJac3.chr22 45567203 298 + 49145316 I e papAnu2.chr19 47350807 0 + 51301725 C e macFas5.chr19 55259546 0 + 59248254 C e rheMac3.chr19 60160459 0 + 64156825 C e panTro4.chr19 59277202 0 + 63644993 C a score=1474.000000 s hg38.chr19_GL949747v2_alt 324709 4 + 729520 CGGC s nomLeu3.chr10 102896978 4 - 106955855 TGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60160459 4 + 64156825 cagc i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47059636 4 + 50890351 cagc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e ponAbe2.chr19 56133952 510 + 60714840 I e calJac3.chr22 45567203 298 + 49145316 I e papAnu2.chr19 47350807 0 + 51301725 C e macFas5.chr19 55259546 0 + 59248254 C e panTro4.chr19 59277202 0 + 63644993 C a score=134.000000 s hg38.chr19_GL949747v2_alt 324713 2 + 729520 CC s ponAbe2.chr19 56134462 2 + 60714840 CC i ponAbe2.chr19 I 510 C 0 s rheMac3.chr19 60160463 2 + 64156825 TT i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47059640 2 + 50890351 TT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102896982 0 - 106955855 C e papAnu2.chr19 47350807 0 + 51301725 C e macFas5.chr19 55259546 0 + 59248254 C e panTro4.chr19 59277202 0 + 63644993 C a score=1000.000000 s hg38.chr19_GL949747v2_alt 324715 1 + 729520 C s ponAbe2.chr19 56134464 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60160465 1 + 64156825 C i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55259546 1 + 59248254 C i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47059642 1 + 50890351 C i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102896982 0 - 106955855 C e papAnu2.chr19 47350807 0 + 51301725 C e panTro4.chr19 59277202 0 + 63644993 C a score=1841989.000000 s hg38.chr19_GL949747v2_alt 324716 1096 + 729520 CTTTTCTTTTTTTGT-ACCTCACTCAGCTCTCTGCATTCTCTGGTTCAACTTAATAGTACTACTAATAACCCAAGTAATAATCTCACTAT----TCTTCTGTCCATTTATCTGTTTTGTTTTACAATTAATGAGAGAATAGTCATAGATTCCAAGTAACTTTTTCAGGAATAAGAAACACTATAGTGAACAAAACCTCCCATTGTTCATTCAATTTGTAATAGAAATGGAGAAAGTCAGATGAATTAAGCAAAAATACAAAAGAGATGAACTATTATTTAAAAACAACACACAGAGGCATAAATGCACAAAATTTAAGCCACCTAGAGGTCTT-GAATGTGTGTTGCCCTTAT--aaaaaaaaa-aaaaaaaaCAGTGccagcctggccaacatggcgaaaccccatctctactaaaaacacaaaaattagttgggtctggtggtgggcacctgtaatcccagctactcaggaagctgaggcaggagaatcgcttgaatccaggagggagagattgcagtgagccgagatcttgccactgcactccatgctgggtgacagagggagactctgttaaaaaa------caaaacaaaaacaaacaaacaaaa-GCAGTGAGTACTAGGGGCAAAGATCACTTAACCCAGTTTGTCATTAAAAAAAA----------TGTTTTTGAGGATGTGACAGGTTAGGTAAAGACTGAACAATGAGCAAGAGGAGGATCCAGAAAGGTAATATTGCCCAACATAGGAGCAGATGATTGCGGTATTTTGATACCAGAAAATGCAGAAATGTTCCTAGTGTGTCTAAAATGTATATGAGAATGAGGAAACGGAAAAAGTGGTACAGAGCTGTATTTCCAGATGTGCAAACAGACGTATGAACATCGACATGTGCAATCAATTGTTAACTGAAAATCAATACAGAAATAAAGTGAGAAATAAAAACACTTATCTGCAATACAGCCATGAGTCTCAGAGCACGGCGTGTGGAGAAATGTACATAAACGGGGTGTCTCTGAGAGGAAACAGAATAAAGAGGTACTTGATTGCCTCTGGAGATGGAAATTGAGAAGATGGGAGCAAGGATCACCTCTATGCCCGTTGGTAAATATA s ponAbe2.chr19 56134465 1101 + 60714840 CTTTTCTTTTTTTGTTACTTCACTCAGCCCTC-GCATTTTCGGATTCAACTTAATAGTACTGCTAATAATCCAAGTAATAATCTCCCTATCTATTCTTCTGTCCATTTATCTGTTTTGTTTTACAATTAATGAGAGAATAGTCATAGATTCCAGGTAACTTTTTCAGGAATAAGAAACCCTATAGTGAACAAAACCTCCCATTGTTCATTCAATTTATAATAGAAATGGAGAAAGTCAGATGAATTAAGCAAAAATACAAAAGAGATGAACTTTTATTTAAAAACAACACCCAGAGGGATAAATGGACAAAATTTAAGCTACCTAGAGGTCTT-GAATGTGTGTTGCCCTTAT--AAAAAAAAA-TAC-----CAGTGccagcctggccaacatggtgaaaccctgtttttactaaaaatacaaaaattagttgggcctagtggcgtgcacctggaatcccagctactcaggagggtgaggcaggagaatcgcctgaatccaggagggagagattgcagtgagccaagatcttgccactgcactccatcctgggtgacagagggagattctgttaaaaaa------aaaaaaaaaaaaaaaaaaaaaaaaaGCAGTGAGTACTATGGGCAAAGATCAC-----CCAGTTTGTCataaaaaaaaaaaaaaaaaaatGTTTTTGAGGATGTGGCAGGTTAGGTAAAGACTGAACAATGAGCAAGAGGTGGATCCAGAAAGGTAATATTGCCCAACATAGGAGCAGATGATTGTGGTATTTTGATACCAAAAAATGCAGAAATGTTCCTAGTGTGTCTAAAATGTATTTGAGAATGAGGAAACAGAAAAAGTGGTATAGAGCTGTATTTCCAGATGTGCAAACAGACATATGAACATCGACGTGTGCAATAAATTGTTAACTGAAAATCAATACAGAAATAAAGTGAGAAATAAAAACACTTATCTGCAATACAGCCATGAGTCTCAGAACACGGCGTGTGGAGAAATGTACATACACTGGGTATCTCTGAGAGGAAACAGAATAAAGAGGTACTTGACCGCCTCTGGAGATGGAAATTGAGAAGATGGGAGGAAGGATCACCTCTATGCCCATTGGTAAATATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102896982 1086 - 106955855 --CCCCTCTTTTTGT-ACCTCACTCAGCTCTCTGCATTCTCTGGTTCAACTTAATAGTACTACTAATAATCCAAGTAATAATCTCACTATTTATTATTCTGCCCATTTATCTGTTTTGTTTTACAATTAATGACAGAATAATCATAGATTCCAAGTAACTTTTTCAGGAATAAGAAACACTATAGTGAATAAAACCTCCCATCGTTCATTCAATTTATAATAGAAATGGAGAAAGTCAGATGAATTAAGCAAAAATACAAAAGAGATGAACTATTATTTAAAAACAACACACAGAGGGATAAATGGACAAAATTTAAGCTACCTAGAGGTCTT-GAATGTGTGTTGCCCTTAC--AAAAAAAAA-TAC-----CAGTGccagcctggccaacacggtgaaaccccatctctaccaaaaacacaaaaattagttgggcctggtggagtgcacctgtaatcgcagcttctcaggaggctgaggcaggagaatcgcttgaatccaggagggagagattgcagtgagcagagatcttgccactgcactccatcctgggtgacagagggagactctgttaaaaaa------aaaaaaaaaaTA-------------GCAGTGAGTACTAGGGGCAAAGACCACTTAACCCAGTTTGTCATAAAAAAAAA-----AAAAATGTTTTTGAGGATGTGACAGGTTAGGTAAAGACTGAACAATGAGGAAGAGGGGGATCCAGAAAGGTAATATTGCCCAACATAGGAGCAGATGATTGCGGTATTTTGATACCAAAAAATGCAGAAATGTTCCCAGTGTGTCTAAAATGTATTTGAGAATGAGGAAACGGAAAAAGTGGTATAGAGCTGTATTTCCAGATGTGCAAACAGACGTATGAACATCGACGTGTGCAATACATTGTTAACTGAAAATCAATACAGAAATAAAGTGAGAAATAAAAACACTTATCTGCAATACAGCCATGAGTCTCAGAGCACAGCGTGTGGAGAAATGTACATGCACGGGGTATCTCTCAGAGGAAACAGAATAAAGAGGTACTTGACTGTCTCTGGAGATGGAAATTGAGAAGATGGGAACAAGGATCACCTCTATGCCCACTGGTAAATATA i nomLeu3.chr10 C 0 T 38 s rheMac3.chr19 60160466 1058 + 64156825 CTTTTCTTTTTTTGT-AGCTCACTCAGCTCTCCGTGTTCTCTGGTTCAACTTAATAGTACTACTAATAATCCAAGTAATAATCTCACTATCTATTCTTCTGTCCATTTATCTGTTTTGTTTTACAATTAATGAGAGACTAGTCATAGATTCCAAGTAACTTTCTCAGGAATAAGAAACACTATAGTGAGCAAAACCTTGCATTGTTCATTCAATTTATGGTAGAAATGGAGAAAGTCAGATGAATTAAGCAAAAATACAAAAGAGCTGAACTATTATTTAAAAACAACACACAGAGGGATAAATAGACAAAATTTAAGCTACCTAGAGGTCTTGGAATGTGTGTTGTCCTTAT--AAAAAAAAA-TAC-----CAGTGccagcctggccaacacggtgaaaccctgtctctactaaaaatacaaaaattagctgggcgtggtggcgcactcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaatccgggagagggagattgcagtgagctgagatcttgccactgcattccatcctgggtgacacagggagactctattaaaaaa------aaacaaaaaaaaaaa-----aaaa-aCAGTGAGTACTAGGGGCAAAGATCACTCAACCCAGTTTGTCATAAAAAGAAA--------AATGTTTGTGAGGATGTGACAGGTTAGGTAAAAACTGAACAATGAGCAAGAGGAGGATCCAGAAAGGTAACATTGCCCAACATAGGAGCAGATGATTGGGGTCTTTTGATACCAAAAAATGCAGAAATGTTCCTAGTGTGTCTAAAATGTATTTGAGAAAGAGGAAATGAAAAAAGTGGTGTAGAGCTGTATTTCCAGGTGTGCAAACAGATGTATGGACATCGACGTGTGCAATAAATTGTTCACTGAAAATCAATACATAAATAAAGTGAGAAATAAAAACACTTATCTGCAATACAGCCATGAGTCTCAGAGCACGGCATGTGGAGA------------------------------AAACAGAATAAAGAGGTATTTGACTGCCTCTGGAGATGGA-----AGAAGATGGGAACAAGGATCACCTCTATGCACGTTGGTAAATATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55259547 1061 + 59248254 CTTTTCTTTTTTTGT-AGCTCACTCAGCTCTCCGTGTTCTCTGGTTCAACTTAATAGTACTACTAATAATCCAAGTAATAATCTCACTATCTATTCTTCTGTCCATTTATCTGTTTTGTTTTACAATTAATGAGAGACTAGTCATAGATTCCAAGTAACTTTCTCAGGAATAAGAAACACTATAGTGAGCAAAACCTTGCATTGTTCATTCAATTTATGGTAGAAATGGAGAAAGTCAGATGAATTAAGCAAAAATACAAAAGAGCTGAACTATTATTTAAAAACAACACACAGAGGGATAAATAGACAAAATTTAAGCTACCTAGAGGTCTTGGAATGTGTGTTGTCCTTAT--AAAAAAAAA-TAC-----CAGTGccagcctggccaacacggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggcgcactcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaatccgggagggagagattgcagtgagctgagatcttgccactgcattccatcctgggtgacacagggagactctattaaaaaa---aacaaacaacaacaaaaa-----aaaa-aCAGTGAGTACTAGGGGCAAAGATCACTCAACCCAGTTTGTCATAAAAAGAAA--------AATGCTTGTGAGGATGTGACAGGTTAGGTAAAAACTGAACAATGAGCAAGAGGAGGATCCAGAAAGGTAATATTGCCCAACATAGGAGCAGATGATTGGGGTCTTTTGATACCAAAAAATGCAGAAATGTTCCTAGTGTGTCTAAAATGTATTTGAGAAAGAGGAAATGAAAAAAGTGGTGTAGAGCTGTATTTCCAGGTGTGCAAACAGACGTATGGACATCGACGTGTGCAATAAATTGTTCACTGAAAATCAATACATAAATAAAGTGAGAAATAAAAACACTTATCTGCAATACAGCCATGAGTCTCAGAGCACGGCATGTGGAGA------------------------------AAACAGAATAAAGAGGTATTTGACTGCCTCTGGAGATGGA-----AGAAGATGGGAACAAGGATCACCTCTATGCACGTTGGTAAATATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47350807 1096 + 51301725 cttttctttttttgt-agctCACTCAGCTCTCCGCGTTCTCTGGTTCAACTTAATAGTACTACTAATAATCCAAGTAATAAT----CTATCTATTCTTCTGtccatttatctgttttgttttacaattaaTGAGAGACTAGTCATAGATTCCAAGTAACTTTCTCGGGAATAAGAAACACTACAGTGAACAAAACCTCCCATTGTTCATTCAATTTATGGTAGAAATGGAGAAAGTCAGATGAATtaagcaaaaatacaaaagagattaactattatttaaaaacaacacacaGAGGGATAAATGGACAAAATTTAAGCTACCTAGAGGTCTTGGAATGTGTGTtgtccttattaaaaaaaaaa-tac-----cagtgccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtgctggcgtgcacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaatcaaggagggagagattgcagtgagccgagatcttgccactgcactccatcctgggtgacagagggagactctgttaaaaaa------aaaaaaaaaaaaaaatagacaaga-gCAGTGAGTACTAGGGGCAAAGATCACTTAACCCAGTttgtcataaaaagaaa--------aatgtttgtgagGATGTGACAGGTTAGGTAAAAACTGAACAAAGAGCAAGAGGAGGATCCAGAAAGGTAATATTACCCAACATAGGAGCAGATGATTGGGGTATTTTGATAccaaaaaatgcagaaatgttcCTAGTGTGTCTAAAATGTATTTGagaatgaggaaatgaaaaaagTGGTATAGAGCTGTATTTCCAGGTGTGCAAACAGACGTATGGACATCGACGTGTGCAATAAATTGTTCACTgaaaatcaatacataaataaagtgagaaataaaaacacttatCTGCAATACAGCCATGAGTCTCAGAGCACGGCATGTGGAGAAATGTACATACAAGAGGTATCTCTGAgaggaaacagaataaagaggTACTTGACTGCCTCTGGAGATGGAAATGGAGAAGATGGGAACAAGGATCACCTGTGTGCCCGTTggtaaatata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47059643 1100 + 50890351 CTTTTCTTTTTTTGT-AGCTCACTCAGCTCTCCACGTTCTCTGGTTCAACTTAATAGTACTACCAATAATCCAAGTAATAATCTCACTATCTATTCTTCTGTCCATTTATCTGTTTTGTTTTACAATTAATGAGCGACTAGTCATAGATTCCAAGTAACTTTCTCGGGAATAAGAAACACTACAGTGAACAAAACCTCCCATTGTTCATTCAATTTATGGTAGAAATGGAGAAAGTCAGATGAATTAAGCAAAAATACAAAAGAGCTGAACTATTATTTAAAAACAACACACAGAGGGATAAATGGACAAAATTTAAGCTACCTAGAGGTCTTGGAATGTGTATTGTCCTTAT--AAAAAAAAATTAC-----CAGTGccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaacttagctgggcgtggtggcgtgcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaatcaaggagggagagattgcagtgagccgagatcttgccactgcactccatcctgggtgacagagggagactctgttaaaaaaaagaaaaagaaaaagaaaaaa-----aaGA-GCAGTGAGTACTACGGGCAAACATCACTTAACCCAGTTTGTCATGAAAAGAAA--------AATGTTTGTGAGGATGTGACAGGTTAGGTAAAAACTGAACAAAGAGCAAGAGGAGGATCTAGAAAGGTAATATTACCCAACATAGGAGCAGTTGATTGGGGTATTTTGATGCCAAAAAATGCGGAAATGTTCCTGATGTGTCCAAAATGTATTTGAGAAAGAGGAAATGAAAAAAGTGGTATAGAGCTGTATTTCCAGGTGTGCAAACAGACGTATGGACATCGACGTGTGCAATAAATTGTTCACTGAAAATCAATACATAAATAAAGTGAGAAATAAAAACACTTATCTGCAATACAGCCATGAGTCTCAGAGCACGGCATGTGGAGAAATGTACATACACGAGGTATCTCTGAGAGGAAACAGAATAAAGAGGTACTTGACTGCCTCTGGAGATGGAAATGGAGAAGATGGGAACAAGGATCACCTGTGTGCCCGTTGGTAAATATA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e panTro4.chr19 59277202 0 + 63644993 C a score=14982.000000 s hg38.chr19_GL949747v2_alt 325812 15 + 729520 TGTT------TGTGTGTGTGT s ponAbe2.chr19 56135566 21 + 60714840 TATTTGTGTGTGTGTGTGTGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60161524 15 + 64156825 ------TTTGTGTGTGTGTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55260608 15 + 59248254 ------TTTGTGTGTGTGTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47351903 15 + 51301725 ------tttgtgtgtgtgtgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47060743 15 + 50890351 ------TTTGTGTGTGTGTGT i chlSab2.chr6 C 0 I 340 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898068 38 - 106955855 T e panTro4.chr19 59277202 0 + 63644993 C a score=-311.000000 s hg38.chr19_GL949747v2_alt 325827 1 + 729520 T s ponAbe2.chr19 56135587 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60161539 1 + 64156825 G i rheMac3.chr19 C 0 I 2 s macFas5.chr19 55260623 1 + 59248254 G i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47351918 1 + 51301725 t i papAnu2.chr19 C 0 I 396 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898068 38 - 106955855 T e chlSab2.chr6 47060758 340 + 50890351 I e panTro4.chr19 59277202 0 + 63644993 C a score=6660.000000 s hg38.chr19_GL949747v2_alt 325828 12 + 729520 TCTTTTTTTTGA s ponAbe2.chr19 56135588 12 + 60714840 TCTTTTTTTTGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60161542 12 + 64156825 TCTTTTTTTTGA i rheMac3.chr19 I 2 C 0 s macFas5.chr19 55260626 12 + 59248254 TCTTTTTTTTGA i macFas5.chr19 I 2 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898068 38 - 106955855 T e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e panTro4.chr19 59277202 0 + 63644993 C a score=32143.000000 s hg38.chr19_GL949747v2_alt 325840 36 + 729520 GGGAACAAGGATCACCTGTGTGCCCACTGGTAAATA s ponAbe2.chr19 56135600 36 + 60714840 GGGAACAAGGATCACCTGTGTGCCCATTGGTAAATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102898030 36 - 106955855 GGGAACAAGGATCACCTCTATGCCCACTGGTAAATA i nomLeu3.chr10 T 38 I 2 s rheMac3.chr19 60161554 36 + 64156825 GGGAACAAGGATCACCTGTGTGCCCATTGGTAAATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55260638 36 + 59248254 GGGAACAAGGATCACCTGTGTGCCCATTGGTAAATA i macFas5.chr19 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e panTro4.chr19 59277202 0 + 63644993 C a score=-1112.000000 s hg38.chr19_GL949747v2_alt 325876 2 + 729520 -TA s ponAbe2.chr19 56135636 2 + 60714840 -TA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60161590 2 + 64156825 TT- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55260674 2 + 59248254 TT- i macFas5.chr19 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898066 2 - 106955855 I e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e panTro4.chr19 59277202 0 + 63644993 C a score=7715.000000 s hg38.chr19_GL949747v2_alt 325878 10 + 729520 tttgtgtgtg s ponAbe2.chr19 56135638 10 + 60714840 TTTATGTGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102898068 10 - 106955855 TTTGTGTGTG i nomLeu3.chr10 I 2 C 0 s rheMac3.chr19 60161592 10 + 64156825 tgtgtgtgtg i rheMac3.chr19 C 0 I 652 s macFas5.chr19 55260676 10 + 59248254 tgtgtgtgtg i macFas5.chr19 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e panTro4.chr19 59277202 0 + 63644993 C a score=90487.000000 s hg38.chr19_GL949747v2_alt 325888 255 + 729520 agttttttgttttgttttgtttttgttgttgttgttgtttgtttgt---ttttttagatgaagtctgactcttattgcccaggctggagtgcagtggtgtagcgcgatcttggctcactgcaacctct------gcctcccaggttcaagtgcttctcctgcctca-cctcccgagtagctgggattacaggtgcccgccaccacgcccagctaa------ttttttgtatttttagtagagacggggtttcactatgttggccaggctgg s ponAbe2.chr19 56135648 227 + 60714840 GGtttt--------ttttgtttttg------------------------ttttttagatgaagtctgactcttgttgcccaggctggagtgcagtggggt-----gatctcggctcattgcaacctctgcctccgcctcccaggttcgagtgcttctcctgcctca-cctcccgagtagctgggattacaggcgcccgccaccgtgcccggctaa------ttttttatatttttagtagagacggggtttcactatgttggccaggctgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102898078 247 - 106955855 GGGTTT--------ttttgttttttttgttgttgtt-ttgttttgt---ttttttagatgaagtctgactcttgttgcccaggctggagtgcagtggagt-----gatcttggctcattgcaacctctgcctccacctcccaggttcaagtgcttctcctgcctca-cctcctgagtagctgggattacaggcgcccgccactacgcccggctaa------ttttttgtatttttagtagagacggggtttcactatgttggccaggctgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55260686 251 + 59248254 ---------------tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttagatgaagtctgactcttgtttcccaggctggcgtgcagtggcac-----catctcagctcactgcaaactccgcctccacctcccaggttcaagtgcttctcctgcctcagcctcctgagtagctgggattacaggcgcatgccaccacatctggctaactttttttttttttttttttttttgagacggagtctctctctgtcacccaggctgg i macFas5.chr19 C 0 I 38 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e rheMac3.chr19 60161602 652 + 64156825 I e panTro4.chr19 59277202 0 + 63644993 C a score=1965.000000 s hg38.chr19_GL949747v2_alt 326143 7 + 729520 tctcaaa s ponAbe2.chr19 56135875 7 + 60714840 tctcaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102898325 7 - 106955855 tctcaaa i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e macFas5.chr19 55260937 38 + 59248254 I e rheMac3.chr19 60161602 652 + 64156825 I e panTro4.chr19 59277202 0 + 63644993 C a score=78064.000000 s hg38.chr19_GL949747v2_alt 326150 230 + 729520 ctcctgacctcaggtgatccaccctctttggcttcccaaagtgctgggattacaggcatgagtgagcccgcacccggcctgtatttttttgtttGtttgtttgttttcagtagagatggggtttcaccatgttatccaggctggtcttgaactcctgacctcaggtgatctgcccacctcggcctcccaaagtgctgggattacaggggtgagcca--ccccgcccggcTGT- s ponAbe2.chr19 56135882 220 + 60714840 ctcctgacctcaggtgatccaccctctttggcctcccaaagtgctgggattacaggcatgagtgagcctgcacccagccCATATATT--------ttttttttttttcagtagagatggggtttcaccatgttagccaggctggtcttgaactcctgacctcaggtgattcgcccacctcggcctgcaaaagtgctgggattacaggcgtgagcca----ccgcacAAATAT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102898332 224 - 106955855 ctcccgacctcaggtgatccaccctctttggcctcccaaagtgctgggattacaggcatgagtgagcccccgcccagccCGTATTTTTT------ttttttttttttcagtagagatggggtttcaccatgttagccaggctggtcttgaactcctgacctcaggtgatccgcccaccttggcctcccaaagtgctgggattacaggcgtgagcca--ccgcgcctggcTAT- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55260975 217 + 59248254 ctcccgggttcccgccattctcctgcctcagcctctggagcagctgggactacaggcgc-------ccgccacctcgcccggctaatt-------tctttgcatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctt--gtgatctgcctgccttggcctcccaaagtgctgggattacaggtgtgagtgagcctgcgcctagcccgt i macFas5.chr19 I 38 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e rheMac3.chr19 60161602 652 + 64156825 I e panTro4.chr19 59277202 0 + 63644993 C a score=73953.000000 s hg38.chr19_GL949747v2_alt 326380 329 + 729520 ATCTGTGTTTTTATATTGCATGAATGAACATGaagaggataaatcggctttactgggggaaatgaatttcaggagaacgtgaggaagcaacagatggagatcactggtgggcgaattgatctggtgagaaatgacaggtgcttggatcaggttgatgcagga---agtggaggtcatgagggttttgagatatgtgtgtgattagagtcatcagaacttgaagaacctctagattcgattttcaaagtgaaagaTCTGCGAATGGACTCATC-----ttttttttttttttcaagatggactcttgctctgttgcccaggctggagtgccacggcgc s ponAbe2.chr19 56136102 323 + 60714840 ATTTGTGTTTTTATATTGCATTAATGAACATGaagaggataaattggctttactgggggaaatgaatttcaggagaacatgaggaagcaacagatggaggtcatgggtaggagaactgatctggtgagaaatgacaggtgcttggatcaggttgatgcaggaagcagtggaggtcatgggggttttgagatatgtgtgtgattagagtcatcagaacttgaagaacctctagattcgatttttaaagtgaaagaTCTGTGAATGGACTCACCttttttttttttttttttttgagatggactctcgctctgt--------------tgccacggcgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102898556 326 - 106955855 ATTTGTGTTTTTATATTGCATTAATGAACATGaagaggataaattggctttactgggggaaatgaatttcaggagaacgtgaggaagcaacagatggagatcattggtaggagaattgatctggtgacaaatgacaggtgcttggatcaggttgatgcaggaagaagtggaggtcatgggggttttgagatatgtgtgtgattagagtcattagaacttgAAGCCCCTCTATATTTGATTTTCAAAGTAAAAGATCTGCAAATGGACCCAAC-----tttttttttt------agacggagtctcgttctgacacctaggccggaatgcaatgccgc i nomLeu3.chr10 C 0 M 409 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e macFas5.chr19 55261192 0 + 59248254 C e rheMac3.chr19 60161602 652 + 64156825 I e panTro4.chr19 59277202 0 + 63644993 C a score=8399.000000 s hg38.chr19_GL949747v2_alt 326709 104 + 729520 gatgtcggctcactgcgaactccgcctccctggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccaccacgcccggctaa s ponAbe2.chr19 56136425 102 + 60714840 gatgtcggctcactgcgaactccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggcctacaggtgcccgcaa--acgcctggctaa i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898882 409 - 106955855 M e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e macFas5.chr19 55261192 0 + 59248254 C e rheMac3.chr19 60161602 652 + 64156825 I e panTro4.chr19 59277202 0 + 63644993 C a score=1580.000000 s hg38.chr19_GL949747v2_alt 326813 17 + 729520 a---tttttgtatttttagt s ponAbe2.chr19 56136527 20 + 60714840 attttttttggatttttggt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55261192 20 + 59248254 attttttttttttttccagg i macFas5.chr19 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898882 409 - 106955855 M e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e rheMac3.chr19 60161602 652 + 64156825 I e panTro4.chr19 59277202 0 + 63644993 C a score=8827.000000 s hg38.chr19_GL949747v2_alt 326830 18 + 729520 agagacggggtttcaccg s ponAbe2.chr19 56136547 18 + 60714840 agagacggggattcacca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55261212 18 + 59248254 agagatggggtttcacca i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47061098 18 + 50890351 agagatggggtttcacca i chlSab2.chr6 I 340 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898882 409 - 106955855 M e papAnu2.chr19 47351919 396 + 51301725 I e rheMac3.chr19 60161602 652 + 64156825 I e panTro4.chr19 59277202 0 + 63644993 C a score=38762.000000 s hg38.chr19_GL949747v2_alt 326848 52 + 729520 tgttagccaggatggtctcgatctcctgacctc--gtgatccgcccgcctcggc s panTro4.chr19 59277202 52 + 63644993 tgttagccaggatggtctcgatctcctgacctc--gtgatccgcccacctcggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56136565 52 + 60714840 tgttagccaggatggtctcgatctcctgacctc--gtgatccacccgcctcagc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55261230 54 + 59248254 tgttggccaggctggtcttgaactcgtgacctcaggtgatccacccatcttggc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47061116 54 + 50890351 tgttggccaggcttgtcttgaactcctgacctcaggtgatccgcccacctcggc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898882 409 - 106955855 M e papAnu2.chr19 47351919 396 + 51301725 I e rheMac3.chr19 60161602 652 + 64156825 I a score=158688.000000 s hg38.chr19_GL949747v2_alt 326900 130 + 729520 ctcccaaagtgctgggattacaggcgtgagccaccgtacctgaccCCAAC-TTTTTTTTTTAATCAAGTGAGTGAGAAGAGGATTCATCTTTTCTTCAAGCCTCAGAAGTCCAGGTGATGATTCTGGTTAG s panTro4.chr19 59277254 130 + 63644993 ctcccaaagtgctgggattacaggcgtgagccaccatacctgaccCCAAC-TTTTTTTTTTAATCAAGTGAGTGAGAAGAGGATTCATCTTTTCTTCAAGCCTCAGAAGTCCAGGTGATGATTCTGGTTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56136617 131 + 60714840 ctcccaaagtgctgggattacaggcgtgagccaccgtgcctgaccCCAACTTTTTTTTTTTAATCAAGTGAGTGAGAAGAGGATTCATCTTTTTTTCAAGCCTCAGAAGTCCAAGTGATGATTCTGGTTAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60162254 130 + 64156825 ctcccaaagtgctgggattacaggcatgagccaccgcgcccggccCCAAC-TTTTTTTTTAAATCAAGTGAGTGACAAGAAGATTCATCTTTTCCACAAGCCTCAGAAGTCCAGGTGATGATTCTGGTTAG i rheMac3.chr19 I 652 C 0 s macFas5.chr19 55261284 130 + 59248254 ctcccaaagtgctgggattacaggcttgagccaccgcgcccggccCCAAC-TTTTTTTTTAAATCAAGTGAGTGACAAGAAGATTCATCTTTTCCACAAGCCTCAGAAGTCCAGGTGATGATTCTGGTTAG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47061170 129 + 50890351 ctcccagagggctgggattacaggcatgagccactgcgccgagccCCAAC-TTTTTTTTT-AATCAAGTGAGTGAGAAGAAGATTCATCTTTTCTGCAAGCCTCAGAAATACGGGTGATGATTCTGGCTAG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898882 409 - 106955855 M e papAnu2.chr19 47351919 396 + 51301725 I a score=81895.000000 s hg38.chr19_GL949747v2_alt 327030 70 + 729520 AAAGAGCTGTCCGTggtcgggtgcggtggctcacgcctgtaatcccagcacttggggaggccgaggcagg s panTro4.chr19 59277384 63 + 63644993 AA-------TCCGTggtcgggtgtggtggctcatgcctgtaatctcagcacttggggaggccgaggcagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56136748 21 + 60714840 AAAGAGCTGTCCATGGTTggg------------------------------------------------- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60162384 70 + 64156825 AAAGAGCTGTCCGTggtcgggcgcggtgcctcacgcctgtaatcccagcacttcgggaggccgaggcagg i rheMac3.chr19 C 0 I 231 s macFas5.chr19 55261414 70 + 59248254 AAAGAGCTGTCCGTggtcgggcgcggtgcctcacgcctgtaatcccagcacttcgggaggccgaggcagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47352315 70 + 51301725 aaaGAGCTATCcgtggttgggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggcagg i papAnu2.chr19 I 396 C 0 s chlSab2.chr6 47061299 70 + 50890351 AAAGAGCTGTCTGTggccgggtgcggtggctcatgcctgtaatcccagcactttgggaggccaaggcagg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898882 409 - 106955855 M a score=254857.000000 s hg38.chr19_GL949747v2_alt 327100 246 + 729520 tggatcat--gaggtcaggagttcaagaccagcctggccaagaaggtgaaaccccgtctctcctaaaaatatgaaaagtagccaggcgtggtggcgggcacctgtaatcccagcttctggggaggctgaggga-gataattgcttgagctcaggaagcggagtttgcagtgagccgagatcgcgccactgcattccaacctgggtgacagagcgagactctgtctcaaaaaaaaaaaaaa-------gaaagaaag s panTro4.chr19 59277447 249 + 63644993 tggatcat--gaggtcaggagttcaagaccagcctggccaagaaggtgaaaccccgtctctcctaaaaatatgaaaagtagccaggcgtggtggcgggcacctgtaatcccagctactcgggaggctgaggga-gataattgcttgaactcaggaagcggagtttgcagtgagccgagatcgcgccactgcactccaacctgggtgacagagcgagactctgtctcaaaaaaaaaaaaaa----aaagaaagaaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56136769 209 + 60714840 ----tcac--aaggtcaggagttcaagaccagcctagccaagaaggtgaaaccccatctctcctaaaaatatgaaaagtagccaggtgtggtggcgggcacctgtaatcccagctactcgggaggctgaggga-gataa------------------------ttgcagtgagccgagattgtgccactgcactccaacctggatgacagagtgagactccgtctcaaaaaaaaaaaaaa---------------- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55261484 237 + 59248254 tggatcac--gaggtcagaagttcaagaccagcctagcaaagatggtgaaaccccatctctactaaaaatatgaaaagtagccaggcatggtggcg-gcgcctgtcgtcccagctactcgggaggctgaggcaggagaattgcttgaactcgggaggcggagcttgcaatgagccgagatctcgccactgcactccagcctgagtgacagagcgagactccatctcaaaaaaaaacaaaa---------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47352385 244 + 51301725 tggatcacctgaggtcagaagttcaagaccagcctggccaagatggtgaaaccccgtctttactaaaaatatgaaaagtagctgggcatggtggcgtgcacctgtagtcccagctactcaggaggctcaggcaggagaattgcctgaactcgggaggtggaggttgcagtgagccgagatcgtgtcatggcactccagcctgggtgacagagcgagactccatctcaaaaaaaaaaaaaaaaaa------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47061369 240 + 50890351 tggatcacctgaggtcagaagttcaagaccagcctggccaagatggtgaaaccccgtctctactaaaaatattaaaagtagctgggcatggtggcgtgcacctgtcgtcccagctactcaggaggctcaggtaggagaattgcttgaactcgggaggcggaggttgcagtgagctgagatcgtgccatggcactccagcctgggtgacagagcgagactccatctcaaaaaaaaaaaaaa---------------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898882 409 - 106955855 M e rheMac3.chr19 60162454 231 + 64156825 I a score=462571.000000 s hg38.chr19_GL949747v2_alt 327346 293 + 729520 aaaaaaaAAAAGAAAGAAAGAGCTGTCCGGAGTTAAATTCAGACCAG-Aggctgggcgcggtgtctcgtgcctgtaatcccagcaacttgggaggccgaggcgggcggatcacaaggtcaggggatcgagaccatcctggctaacacagggaaaccccgtctctactaaaaatacaaaaaattagccgggcgtggtggctggtgcctgtagtcccagctactcg-------ggaggctgaggtaggagaatggcatgaacccaggaggcagagcttgcagtgagccgagatcgcgccactg s panTro4.chr19 59277696 293 + 63644993 aaaaaaagaaagaaagaaagaGCTGTCCGGAGTTAAATTCAGACCGG-Aggctgggcgcggtgtctcacgcctgtaatcccagcaacttgggaggctgaggcaggcggatcacaaggtcaggggatcgagaccatcctggctaacacagggaaaccctgtctctactaaaaatacaaaaaattagccgggcgtggtggctggtgcctgtagtcccagctactca-------gaaggctgaggcaggagaatggcgtgaacctgggaggcagagcttgcagtgagccgagatcgcgccactg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56136978 282 + 60714840 -----------gaaagaaaGAGCTGTCCGGAGTTAAATTCAAACCAA-Aagctgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacgaggtcaggagatcgagaccatcctggctaacacggggaaaccccatctctactaaaaatacaaaaaattagccgggcatggtggctggtgcctgtagtcccagctactcg-------ggaggctgaggcaggagaatggcatgaacccaggaggcagagcttgcaatgagccgagatcgcaccactg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60162685 296 + 64156825 aaaaaaacaaaaaaacaaaGAGCTGTCTGGAGTTAAATTCAGACCAGCAggctgggcccagtggctcacgcctgtaatgccagcactttgggaggccaaggcgggcggatcacgaggtcaggagatagagaccatcctggctaacccggcgaagccccatctttactaaaaatacaaaaaattagccgggcgtggtggc----gcctgtagtctcagctactcggcactcaggaggctgaggcaggagaatgg-gtgaacccgggaggcggagcttgcagtgagccgggatcgcaccactg i rheMac3.chr19 I 231 C 0 s macFas5.chr19 55261721 292 + 59248254 ----aaacaaaaaaacaaaGAGCTGTCTGGAGTTAAATTCAGACCAGCAggctgggcccagtggctcacgcctgtaatgccagcactttgggaggccaaggcgggcggatcacgaggtcaggagatagagaccatcctggctaacccggtgaagccccatctttactaaaaatacaaaaaattagccgggcgtggtggc----gcctgtagtctcagctactcggaactcgggaggctgaggcaggagaatgg-gtgaacccgggaggcggagcttgcagtgagccgggatcgcaccactg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47352629 280 + 51301725 ----------------aaagagctgtctGGAGTTAAATTCAGAccagcaggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggtggatcaggtggtcaggagatcgagaccatcctggctaacacggtgaagccccatctttactaaaaatacaaaaaattagccgggcgtggtggc----gcctgtagtctcagctactcggaactcgggaggctgaggcaggagcatgt-gtgaacccaggaggcggagcttgcagtgagccgggatcgcaccactg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47061609 279 + 50890351 -----------------aaGAGCTGTCTGGAGTTAAATTCAGACCAGCAggccaggtgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggtggatcaggtggtcaggagatcgagaccatcctggctaacacggtgaagccccatctttactaaaaatacaaaacattagccaggcgtggtggc----gcctgtagtctcagctactcggaactcgggaggccgaggcaggagcatgg-gtgaacccaggaggcggagcttgcagtgagccgggatcgcaccactg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898882 409 - 106955855 M a score=378903.000000 s hg38.chr19_GL949747v2_alt 327639 215 + 729520 --cactccagcctgggcgacagagcaagaccccgtctcaaaaacaaacaaacaaacaaaaaaaaaCCCAAAAAAACACACAAAAACAAATCCAGACCAGCAGTGATTTTCCCTAAAATGAGAATCCTGAGATAGGAGCTTCCGTACTCATCACAATTGGAGTCAAC-TTTCACGCAGACCTCAAGGTGTCCAAGTACTTTCCATATAAGTGTTGCTGC s panTro4.chr19 59277989 213 + 63644993 --cactccagcctgggcgacagagcaagaccccgtctcaaaaacaaacaaacaaacaaacaaaaac--aaaaaaacacacaaaaacaaaTCCAGACCAAAAGTGATTTTCCCTAAAATGAGAATCCTGAGATAGGAGCTTCCGTACTCATCACAATTGGAGTCAAC-TTTCACGCAGACCTCAAGGTGTCCAAGTACTTTCCATATAAGTGTTGCTGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56137260 195 + 60714840 --cactccagcctgggcgacagagcgagactccgtctcaaaaacaaacaaac--------------------aaacacacaaaaacaaATCCAGACCAGCAGTGATTTTCCCTAAAATGAGAATCCTGAGATAGGAGCTTCCATACTCATCACAATTGGAGTCAAC-TTACATGCAGACCTCAAGATGTCCAAGTACTTTCCATATAAGTGTTCCTGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102899292 208 - 106955855 --cattccagcctgggtgacagagtgagactccatctcaaaaacaaacaaacaaacaaaca-------aaaaaacCCCACAAAAACAAATCCAGACCAGCAGTGATTTTCCCTAAAATGAGAATCCTGAGATAGGAGCTTCCACACTCACCACAATTGGAGTCAAC-TTACACACAGACCTCAAGGTGTCCAAGTACTTTCCGTATGAGTGTTGCTGa i nomLeu3.chr10 M 409 C 0 s rheMac3.chr19 60162981 180 + 64156825 tactgtccagcctgggcgac-gagcgagactccgtctcaaaaa-------------------------------------agaaaaaaTTCCAGACCAGCAGTGATTTTCCCTAAAACGAGAATCCTGAGATAGGAGCTTCCATACTCACCACAACTGGAGTCAACTTTACACACAGACCCCAAGGTGTCCAAGTACTTTCCATATGAGTGTTGCTGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55262013 180 + 59248254 tactgtccagcctgggcgac-gagcgagactccgtctcaaaaa-------------------------------------agaaaaaaTTCCAGACCAGCAGTGATTTTCCCTAAAACGAGAATCCTGAGATAGGAGCTTCCATACTCACCACAACTGGAGTCAACTTTACACACAGACCCCAAGGTGTCCAAGTACTTTCTATATAAGTGTTGCTGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47352909 180 + 51301725 cactgtccagcctgggcgat-gagcaagactccgtctcaaaaa-------------------------------------agaaaaaattccagacCAGCAGTGATTTTCCCTAAAACGAGAATCCTGAGATAGGAGCTTCCATACTCACCATAACTGGAGTCAACTTTACACACAGTCCCCAAGGTGTCCAAGTACTTTCCATATGAGTGTTGctgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47061888 173 + 50890351 cactgtccagcctgggcgac-gagcaaaactccgtctcaaaaa-------------------------------------agaaaaaaTTCCAGACCAGCAGTGATTTTCCCTAAAACGAGAATCCTGAGATAGGAGCTTCCATACTCACCACAACTGGAGTCA-------ACACAGACCCCAAGGTGTCTAAGTACTTTCCATATGAGTGTTGCTGC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I a score=1715072.000000 s hg38.chr19_GL949747v2_alt 327854 612 + 729520 t---------------------------aaaa--------ataaaataa-------------taataataCAAACTCCAGGCCTCTTGGATTCTAAAAATGGGAGTTGTGTATCTCTTTTTTCTCCAAATTTAGCCTGGCCTCTCATGCTTGAGTTGTCTACAGCAGCTTCCATGAGTTCCCAGTGTGGTTGAAATCATAAATATGCCTTCTCTTTCATTTCCCTTTTTC--ACAT-CCCCACACCCACGTGGTGGTTCAGCTGGGGAGCTATATTTCCTTGGG-----------------GAGGAAAGTAGCACAGTGGGTGTCATACCCAGGGGAGATTAACTTTCGGGTCCTGTAGTTGCCCCTACCAGGGTGAGAACCTGGTGCTCATAGAAACCTGCTCAGAAAATCGCTTTCTTGCTTTTGTTCCTTCCTCCACACAATGGCCACAGTTACTGGTGGAG-ACAAA--ATGTCTGGAGTGGACTGGAGTCC-AAGAAAAGGTACATCGGGCATTTCCTCGCCTAGGAAGTCACTGGCACAGAAGTTCAGAAATGAGCGAGATTTTGAAAACAAGAATAggccgggtgcggtgtctcacgcctggaatcccagcactttgggaggccgaggcaggcacatcctctgaggtcaggagttcaagaccagcctggtcaacatg s panTro4.chr19 59278202 621 + 63644993 T---------------------------Aaaa--------ataaaataa-aata--aaataataataaTACAAACTCCAGGCCTCTTGGATTCTAAAAATGGGAGT-GTGTATCTCTTTTTTCTCCAAATTTAGCCTGGCCTCTCATGCTTGAGTTGTCTACAGCAGCTTCCATGAGTTCCCAGTGTGGTTGAAATCATAAATATTCCTTCTCTTTCATTTCCCTTTTTC--ACAT-CCCCAAACCCACGTGGTGGTTCAGCTGGGGAGCTATATTTCCTTGGG-----------------GAGGAAAGTAGCACAGTGGGTGTCATACCCAGGGGAGATTAACTTTCGGGTCCTGCAGTTGCCCCTACCAGGGCGAGAACCTGGTGCTCATAGAAACCTGCTCAGAAAATCGCTTTCTTGCTTTTGTTCCTTCCTCAACACAATGGCCATGGTTACTGGTGGAG-ACAAA--ATGTCCGGAGTGGACTGGAGTCC-AAGAAAAGGTACATCGGGCATTTCCTTGCCTAGGAAGTCACTGGCACAGAAGTTCAGAAATGAGCGAGATTTTGAAAACAAGAATAggccgggtgcggtggctcacgcctggaatcccagcactttgggaggccgaggcaggtacatcatctgaggtcaggagttcaagaccagcctggccaacatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56137455 630 + 60714840 TA--------------------------AAAA--------ATAAAATAA-------------CAATAATACAAACTCCAGGCCTCTTGGATTCTAAAAACGGGAGTTGTGTATCTCTTTTTTCTCCAAATTTAGCCTGGCCTCTCATTCTTGAGTTGTCTACAGCAGGTTCCATGAGTTCCCAGTGTGGTTGAAATCATAAATATTCCTTCTCTTTCATTTCCCTTTTTCAAAAAT-CCCCAAACCCACGTGGTGGTTCAGCTGGGGAGCTATATTTCCTTGGGGAGGAAAGTGAGATTTTGAGGAAAGTAGCACAGTGGGTGTCATACCCAGGGGAGATTAACTTTCAGGTCCTGCAGTTGCCCCTACCAGGGCGAGAACCTGGTGCTCATAGAAACCTGCTCAGAAAATCTCTTTCTTGCTTTTGTTCTTTCCTCAACACAATGGCCACGGTTACTGGTGGAG-ACAAA--ATATACGGAGTGGACT-GAGTCC-AAGAAAAGGTACATCGGGCA-TTCCTTGCCTAGGAAGTCACTGGCACAGAAGTTCAGAAATGAGCGAAATTTTGAAAACAAGAATAggccgggtgcggtggctcatgcctggaatcccagcactttgggaggccgaggcaggcacatcatctgaggtcaggagttcaagaccagcctggccaacatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102899500 642 - 106955855 ta--------------------------aaaa--------ataaagtaa-aata--aaataataataatacaaaCTCCAGGCCTCTTGGATTCTAAAAACGGGGGTTGTGTATCTCTTTTTTCTCCAAATTTAGCCTGGCCTCTCGTTCTTGAGTTGTCTACAGCAGTTTCCATGAGTTCCCAGTGTGGTTGAAATCATGAATACTCCTTCCCTTTCATTTCCCTTTTTC--ACAT-CCCCAAACCCACGTGGTGGTTCAGCTGGGGAGCTATATTTCCGTGGGGAGGAAAGTGAGATTTTGAGGAAAGTAGCACAGTGGATGTCATACCCAGGGGAGATTAACTTTCAGGTCCTGCAGTTGCCCCTCCCAGGGAGACGACCTGGTGCTCATAGAAACCTGCTCAGAAAATCTCTTTCTTGCTTTTGTTCCTTCCTCAACATAATGGCCACGGTTACTGGTGGAGAACAAA-TATGTCCAGAGTGGACTGTAGTCC-AAGAAAAGGTACATCGGGCATTTCCTTGCCTAGGAAGTCACTGGCACAGAAGTTCAGAAATGAGCGAGATTTTGAAAACAAAAATAggccgggtgcggtggctcatgcctggaatcccagcactttgggaggccgaggcaggcacatcatctgaggtcaggagttcgagaacagcctggccaacatg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60163161 676 + 64156825 TAAAAAAATACAATACAATGTTGCTGCTAAAAAAAATACAATACaataataataataataaataataataCAAACTCCAGGCCTCTTGGATTCTAAAAATGGGACTTGTGTATCTCTTTTTTCTCCAGATTTAGCCTGGCCTGTCTTTCTCGAGTTGGCTGCAGCAGGTTCCTTGAGTTCCCAGTGTGGTTGAAATCATAAATATTCCTTCTCTTTCATTTCCCTTTTTC--ACAT-CCCCAGACCCACGTGGTGGTTCATCTGGGGATCCGTATTTCCTTGGGGAGGAAAGTGAGATTTTGAGGAAAGTA--ACAGTGGGTGTCATACCCAGGGGAGAGTAACTTTCAGTTCCTGCAGTTGCCCCTACC-GGGCGACAATCTGGTGCTCATAGAAACCTGCTCAGAGAATCTCTTTCTTGCTTTTGTTCCTTCCTCAACACAACGGCCACGGTTACCGGTGGAG-ACAAAATATGTCCGGAGTGGACTGGAGTCC-AAGAAAAGGTACATCTGGCATTTCCTTGCCTAGGAAGTCGCTGGCACAGAAGTTCAGAAATGAGTGAGCTTTTGAAAACAAGAACGggcccggcgcaatggctcacgcctggaatcccagcactttgggaggccgaggcaggcagatcacctgaggtcaggagttcaagaccagcctggccaatatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55262193 650 + 59248254 TA--------------------------AAAAAAAATACAATACAATAATAATAATAAATAATAATAATACAAACTCCAGGCCTCTTGGATTCTAAAAATGGGACTTGTGTATCTCTTTTTTCTCCAGATTTAGCCTGGCCTGTCTTTCTCGAGTTGGCTGCAGCAGGTTCCTTGAGTTCCCAGTGTGGTTGAAATCATAAATATTCCTTCTCTTTCATTTCCCTTTTTC--ACAT-CCCCAGACCCACGTGGTGGTTCATCTGGGGAGCCGTATTTCCTTGGGGAGGAAAGTGAGATTTTGAGGAAAGTA--ACACTGGGTGTCATACCCAGGGGAGATTAACTTTCAGTTCCTGCAGTTGCCCCTACC-GGGCGACAATCTGGTGCTCATAGAAACCTGCTCAGAGAATCTCTTTCTTGCTTTTGTTCCTTCCTCAACACAACGGCCACGGTTACCGGTGGAG-ACAAAATATGTCCGGAGTGGACTGGAGTCC-AAGAAAAGGTACATCTGGCATTTCCTTGCCTAGGAAGTCGCTGGCACAGAAGTTCAGAAATGAGTGAGCTTTTGAAAACAAGAACGggcccggcgcaatggctcacgcctggaatcccagcactttgggaggccgaggcaggcagatcacctgaggtcaggagttcaagaccagcctggccaatatg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47353089 640 + 51301725 ta--------------------------aaaa-------aatacaataataataataataataaataatacaaactCCAGGCCTCTTGGATTCTAAAAATGGGACTTGTGTAtctcttttttctccaaatttaGCCTGGCCTCTCTTTCTCAAGTTGGCTACAGCAGGTTCCTTGAGTTCCCAGTGTGGTTGAAATCATAAATattccttctctttcatttccctttttc--acaT-CCCCAAACCCACGTGGTGGTTCATCTGGGGAGCCGTATTTCCTTGGGGAGGAAAGTGAGATTTTGAGGAAAGTA--ACAGTGGGTGTCATACCCAGGGGAGATTAACTTTCAGTTCCTGCAGTTGCCCCTACC-GGCCGACAATCTGGTGCTCATAGAAACCTGCTCAGAGAATC----TCTTGCTTTTGTTCCTTCCTCAACACAATGGCCACGGTTACCGGTGGAG-ACAAAATATGTCCGGAGTGGACTAGAGTCCaaaaaaaaGGTACATCTGGCATTTCCTTGCCTAGGAAGTCGCTGGCACAGAAGTTCAGAAATGAGTGAGCTTTTGAAAACAAGAATGGGCCCggagcaatggctcacgcctggaatcccagcactttgggaggccgaggcaggcagatcacctgaggtcaggagttcgagaccagcctggccaatatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47062061 642 + 50890351 TA--------------------------AAAA--AATACAATACAATAATAATAATAATACTAAATAATACAAACTCCAGGCCTCTTGGATTCTAAAAATGGGACTTGTGAATCTCTTTTTTCTCCAAATTTAGCCTGGCCTCTCTTTCTCGAGTTGGCTACAGCAGGTTCCTTGAGTTCCCAGTGTGGTTGAA---ATAAATATTCCTTCTCTTTCATTTCCCTTTTTC--ACATCCCCCAAACCCACGTGGTGGTTCATCTGGGGAGCCGTATTTCCTTGGGGAGGAAAGTGAGATTTTGAGGAAAGTA--ACAGTGGGTGTCATACCCAGGGGAGATTAACTTTCAGTTCCTGCAGTTGCCCTTACC-GGCCGACAATCTGGTGCTCATAGAAACCTGCTCAGAGAATC----TCTTGCTTTTGTTCCTTCCTCAACACAAGGGCCACGGTTACCGGTGGAG-ACAAAATATGTCCGGAGTGGACTAGAGTCC-AAGAAAAGGTACATCTGGCATTTCCTTGCCTAGGAAGTTGCTGGCACAGAAGTTCAGAAATGAGTGAGCTTTTGAAAACAAGAATGggcccggagcaatggctcacgcctggaatcccagcactttgggaggccgaggcaggcagatcacctgaggtcaggagttcgagatcagcctggccaatatg i chlSab2.chr6 C 0 I 239 s calJac3.chr22 45567501 594 + 49145316 ---------------------------taaaa--------acaaaTTAATAA----------TAATAATACAAACTGCAGGCCTCTTGGATTCT-AAAATGGGAGTCATGTATCTCTTT-----------------------------CTTGAGTTGGCTACAGCAGGTTCCATGAGTTCCCAGTGTGGTCGAAATCATAAATATTCTGTCTCTTTCATTTCCCTTTTTC--ACAT-CCCCAAACCCACATGTTGGTTCACCTGGGAAGC--TATTTTCTTGGGGAGGAAAGTGAGATTTTGAGGAAAGTAGCACAGTGGGTGTCATATGCAGGGGAGAGTCACTTTCAAGTCCTGTGGTTGC--------AGGTGACAGCCTGGTGCTCATAGGAATCTGCTCAGAAAATCTCTATCTTGTTTCTGTTCCTTCCTCAACACAATGGCCATGGTTACCGGTGGAG-ACAAAATACGTCCAGAGTGGACTGGAGTCC-AAGAAAAGATGTATCTGGCATCGCCTTTCCTAGAAAGTCACTGGGACAGAAGTTCAGAAATGAATGAGCTTTTGAAAACAAGAATGggccaggcgtggtggctcatgcctgtaatcccagcacttcgggaggctgaggtgggcagatcacctaaggttaggagttcgagaccagcctggccaacatg i calJac3.chr22 I 298 C 0 e canFam3.chr1 19746457 10348 - 122678785 I a score=1883.000000 s hg38.chr19_GL949747v2_alt 328466 1 + 729520 g s panTro4.chr19 59278823 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56138085 1 + 60714840 g i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102900142 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60163837 1 + 64156825 g i rheMac3.chr19 C 0 I 241 s macFas5.chr19 55262843 1 + 59248254 g i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47353729 1 + 51301725 g i papAnu2.chr19 C 0 I 1 s calJac3.chr22 45568095 1 + 49145316 g i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47062703 239 + 50890351 I a score=10700.000000 s hg38.chr19_GL949747v2_alt 328467 27 + 729520 gaaaaccctgtctctaccaaaaat---aaa s panTro4.chr19 59278824 28 + 63644993 ggaaaccctgtctctaccaaaaatt--aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56138086 26 + 60714840 ggaaaccccgtctctaccaaaaat----aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102900143 26 - 106955855 ggaaaccccgtctctaccaaaaat----aa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55262845 14 + 59248254 ----------------caaaATATTTCAAA i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47353731 14 + 51301725 ----------------caaaatatttcaaa i papAnu2.chr19 I 1 N 0 s calJac3.chr22 45568096 25 + 49145316 ggaaactctgtctctactaaaact----a- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=21729.000000 s hg38.chr19_GL949747v2_alt 328494 28 + 729520 aaaaaattagccgggcgtgatggtgcag s panTro4.chr19 59278852 28 + 63644993 aaaaaattagccaggtgtgatggtgcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56138112 28 + 60714840 aaaaaattaggcgggcgtggtggtgcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102900169 28 - 106955855 aaaaaatcagctgggcgtgatggtgcag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55262859 19 + 59248254 AAAAAATT---------TGAAAGTGCAG i macFas5.chr19 C 0 N 0 s calJac3.chr22 45568121 28 + 49145316 aaaaaattggttgggcttggtggtgggt i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=89962.000000 s hg38.chr19_GL949747v2_alt 328522 114 + 729520 ggctgtaatcccagctactctagaggctgagatggcag-atctcttgaaccctggaggtggaggctgcagtgagccgagatcgcgccactgcactccagcctggtagacagagca s panTro4.chr19 59278880 114 + 63644993 ggctgtaatcccagctactctagaggctgagacggcag-atctcttgaaccctggaggtggaggctgcagtgagccgagatcgcgccactgcactccagcctggtagacagagca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56138140 114 + 60714840 ggctgtaatcccagctactctggaggctgagacagcag-atctcttgaaccctggaggtggaggctgcagtgagccgagattgtgccactgcactccagcctaggtgacagagca i ponAbe2.chr19 C 0 I 14661 s nomLeu3.chr10 102900197 114 - 106955855 ggctgtaatcccagctactctggaggctgagacagcag-atctcttgaactctggaggtggaggctgcagtgagccgagattgtgccattgcactccagcctaggtgacagagca i nomLeu3.chr10 C 0 I 408 s calJac3.chr22 45568149 115 + 49145316 gcctgtaatcccagctaattgggaggctgaggcaggagaattgcttgaacccaggaggtggaggcttcagtgagtcgagattgcaccactgcataccagcctgggcgacagagca i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=6560.000000 s hg38.chr19_GL949747v2_alt 328636 18 + 729520 agactccgtctc---aaataa s panTro4.chr19 59278994 18 + 63644993 agactccatctc---aaataa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56152915 21 + 60714840 agactccatctcaaaaaataa i ponAbe2.chr19 I 14661 C 0 s nomLeu3.chr10 102900719 13 - 106955855 agactctgtctc---a----- i nomLeu3.chr10 I 408 C 0 s calJac3.chr22 45568264 16 + 49145316 agact--gtctc---aaaaaa i calJac3.chr22 C 0 I 2958 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=17219.000000 s hg38.chr19_GL949747v2_alt 328654 39 + 729520 ataaataaataattaaaaaaTTAAAACAT--AAAAAAATAA s panTro4.chr19 59279012 39 + 63644993 ataaataaataattaaaaaaTTAAAACAT--AAAAAAATAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56152936 41 + 60714840 ataaataaataatttaaaaaTTAAAACattaaaaaaaataa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102900732 38 - 106955855 --aaaaaaataattaaaaaattaaaacatt-aaaaaaaTAA i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45568280 2958 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=36082.000000 s hg38.chr19_GL949747v2_alt 328693 33 + 729520 AAATTTTCTCGGGGAGCTGACTATGAGAAGGCA s panTro4.chr19 59279051 33 + 63644993 AAATTTTCTCGGGGAGCTGACTATGAGAAGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56152977 29 + 60714840 aaattttCTCGGGGAG----CTATGAGAAGGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102900770 33 - 106955855 AAATTTTCTCAGGGAGGTGACTATGAGAAGGCA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55453514 33 + 59248254 AAATTGTCTCAAGGAGCTGACAGTGAGAAGACA i macFas5.chr19 N 0 I 301 s calJac3.chr22 45571238 33 + 49145316 AAATTTTCTCAGGGAGCTGACTGTGAGAAGGCA i calJac3.chr22 I 2958 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=1000.000000 s hg38.chr19_GL949747v2_alt 328726 1 + 729520 G s panTro4.chr19 59279084 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56153006 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102900803 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45571271 1 + 49145316 G i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47062703 239 + 50890351 I e macFas5.chr19 55453547 301 + 59248254 I e rheMac3.chr19 60163838 241 + 64156825 I a score=88373.000000 s hg38.chr19_GL949747v2_alt 328727 87 + 729520 AAATATGTTAATATCTCCAGGTGTCTGTCTGGGGTGTGGTGGGTGGGAAAAAGGCGGAAGTGGTTTCCTGTAATGAATTTGCTCTGT s panTro4.chr19 59279085 87 + 63644993 AAATATGTTAATATCTCCAGGTGTCTGTCTGGGGTGTGGTGGGTGGGAAAAAGGCGGAAGTGGTTTCCTGTAATGAATTTGCTCTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56153007 87 + 60714840 AAATATGTTAATATCTCCAGGTGTCTGTCTGGGGTGGGGTGGGTGGGAAGAAGGCGGAAGTGGTTTCCTGTAATGAATTTGCTCTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102900804 87 - 106955855 AAATATGTTAATATCTCAAGGCGTCTGTCTGGGCTGTGGTGGGTGGGAAGAAGGCGGAAGTGGTTTCTTGTGATGAATTTGCTCTGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55453848 66 + 59248254 AAATGTGTCACTATCTCAGGGTGTATGT----------GTGTCTGGGGAGG----GACAGTGGTTTTCTGTGCTGAGTTT------- i macFas5.chr19 I 301 C 0 s papAnu2.chr19 47538016 73 + 51301725 aaatGTGTTACTATCTCAGGGTTTGTGA----------GTGTCTGGGGAGG----GGCAGTGGTTTTCTGTGCTGAGTTTGCTCTGA i papAnu2.chr19 N 0 C 0 s calJac3.chr22 45571272 80 + 49145316 ACATATGTTACTATCTTAA-GTGTCTTTCTGAGGCGTGGTG---GGGAAGGG---GTAAGTGGTTTCCTGTAATGAATTTGCTCTGT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=788579.000000 s hg38.chr19_GL949747v2_alt 328814 570 + 729520 AGGAAGGAGCCATGTTTTTTGGCGCTGGGGATGTTAACTTAGTCCTGGTCATCAACAACATGAACATCAGGCAGAGATACTTGTGTCTTACTTGGAGGAAGATTCAGACCCGGAGAAGGATTTTGATCAG------GGAAGAGTC------AGCTACAGATAAGGTT----------GGGGCTATGAGAATAATAGATGTCAGCCTGGAGTGAGGGTTTGGAGAAGAGGACCAG-GAGGAGGCTGATGTGGTGGCACAGACAGGCTGTCTTCAGTCTCCAG-TGAGCTTGCACTGTGGGAATGGACCCGGGGACGTGGGTGAGGAGGGCTCAAGGGTAC-AACTGCTTGGATTTGTTCACTGTATGTGAAACAAAAGTGAGTGAGCAACTAGGGTCTGTTTCACTCTCTGCCTTAGTTTACTGGAGGAACGAATGGTGTCATCCCAGGATGAATGATCCC-GGGGAAGAACCAGGCTAGGGAGATATTTATAAGGCTGTTCA-CGGAGTGCAG-AGGAAGCACTA-TCTCCCTCCTGGCCCTGCTGTCTAG-TTTTGTTTCTCCCAAGCAC-TTCTTCCCTCCG-ACTTTCTTAATTCTATA s panTro4.chr19 59279172 570 + 63644993 AGGAAGGAACCATGTGTTTTGGCGCTGGAGATGTTAACTTAGTCCTGGTCATCAACAACATGAACATCAGGCAGAGATACTTGTGTCTTACTTGGAGGAAGATTCAGACCCGGAGAAGGATTTTGATCAG------GGAAGAGTC------AGCTACAGATAAGGTT----------GGGGCTATGAGAATAATAGATGTCAGCCTGGAGTGAGGGTTTGGAGAAGAGGACCAG-GAGGAGGCTGATGTGGTGGCACAGACAGGCTGTCTTCAGTCTCCAG-TGAGCTTGCACTGTGGGAATGGACCCGGGGACATGGGTGAGGAGGGCTCAAGGGTAC-AACTGCTTGGATTTGTTCACTGTATGTGAAACAAAAGTGAGTGAGCAACTAGGGTCTGTTTCACTCTCTGCCTTAGTTTACTGGAGGAACCAATGGTGTCATCCCAGGATGAATGATCCT-GGGGAAGAACCAGGCTAGGGAGATATTTATAAGGCTGTTCA-CGGAGTGCAG-AGGAAGCGCTA-CCTCCCTCCTGGCCCTGCTGTCTAG-TTTTCTTTCTCCCAAGCAC-TTCTTCCCTCCG-ACTTTCTTAATTCTATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56153094 540 + 60714840 AGGGAGGAGCCATGTTTTTTGGTGCTGGAGGTGTTAACTTAGTCCTAGTCATCAACAACATGAACATCAGGCAGAGATACTTGTGTCTTACTTGCAGGAAGATTC------------------------------------AGTC------AGCTACAGATAAGGTT----------GGGGCTATGAGAATAATAGATGTCAGCCTGGGGTGAGGGCTTGGAGAAGAGGACCAG-GAGGAGGCTGATGTGGTGGCACAGACAGGCTGTGTTCAGTCTCCAG-TGAGCTTGCACTGTGGGAATGGACCCGGGGACGTGGGTGAGGAGGGCTCAAGGGTAC-AACTGCTTGGATTTCTTCACTGTCTGTGAAACAAAAGTGAGTGAGCAACTAGGGTGTGTTTCACTCTCTGCCTTACTTTACTGGGGGAACCAATGGTGTCATCCCAGGATGAATGACCCT-GGGGAGGAACCAGGCTAGGGAGATATTTATAAGGCTGTTCA-GGGACTGCAG-AGGAAGCGCTA-CCTCCCTCCTGGCCCTGCTGTCTAG-TTTTGTTTCTCCCAAGCAC-TTCTTCCCTCCG-ACTTTCTTAACTCTATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102900891 566 - 106955855 AGGGAGGAGCCATGTTTTTTGGCGCTGGAGATATTAACTTAGTCCTGGTCATCAACAACGTGAACGTCAGGCAGAGATACTTGTGTCTTACTTGGAGGAAGCTTCAGACCCGGAGAAGGATTTTGACCAG------GGAAGAGTC------AGCTGCAGATAAGGTT----------GGGGCTGTGAGAATAACAGGTGTCAGCCTGGGGTGAGGGCTTGGAGAAGAGGACCAG-GAGGAGGCTGATGTGATGGCACAGACAGGCTGTCTAAAGTCTCCAG-TGAGCTTGCACCGTGGGAGTGGACTCGGGGACGTGGGTGAGGAGGGCTCAAGGGTAC-AACTGCTTGGATTTGTTCACTGTATGTGAAACAAAAGTGAGTGAGTAACTAGGGTCTGTTTCACTCTCTGCCTTGGTTTACTGGAGGACCCAATGGTGTCATCCCAGGATGAATGACCCCGGGGGAGGAACCAGCCGAGGGAGATATTTATAAGGCTGTTCA-CGGACTGCAG-AGGAAGCGCTA-CCTCCCTCCTGGCCCTGCTGTCTGG-TTTTGTTT------AGCACTTTCTTCCCTCCG-ACTTTCTTATTTCTATA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55453914 550 + 59248254 --ACAAGAGCTGTGTTTTCTGGGGCTGGAGAGTTTAGCTCAGTCCTGGTCATCAGTAATACGAACGTCAAACAGGGAGGCTTGTGTCTTATTTGGAGGAAGATGCACACCTGTGGAAGGATTTTGATCAG-----------GGCT------GGAGACAGGTAAGTTT----------GGGGCTGTGAGAATAATAGACGTCAGTCTGGAGTG-------------GCGGGCTGG-GAGGAGGATGATGTGA---CACAGACAAGACGTCTTCGGTCTTTAGTTGAGCTTTGACTGTGGGGATGGGCCAGGGGATGTGGGTGAGGAGGGATTGGGGGAAAGAGCTGTTTGGATTTGTTCACTGTGTGTGGAGCAGAAGAGCATGAGGAACTGAGGGCTGCTCCGGTCTCTGCCTCAGTTCACTGGAGGAGCCAATGGGGCCATCACGGGATGGATGACCCCAGGAGAAGAAGCAGGCAGGGGAGATGTTTATAAGATGGACAA-CTGGCCTCAG-AGAAAGCAGAG-CCTCCCTCTGGGCCTGAGTGTGTGG-TTTCATTCCTCCCAAACAC-TTCCTCCATCTG-ACTTCCTTAGTTCTAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47538089 551 + 51301725 AGGCAAGAGCTGTGTTTTCTGGGGCTGGAGAGTTTAGCTCAGTCCTGGTCATCAGTAATATGAACGTCAAACA-GGAGACTTGTGTCTTATTTGGAGGAAGATGCAGACCTGTGGAAGGATTTTGATCAG-----------GGTC------GGAGACAGGTAAGTTT----------GGGGCTGTGAGAATAATAGATGTCAGTCTGGAGCA-------------GCAGGCTGG-GAGGAGGATGATGTGA---CACAGACAAGACGTCTTCGGTCTTTAGTTGAGCTTTGACTGTGGGGATGGGCCAGGGGATGTGGGTGAGGAGGGATTGGGGGAAAGAGCTGTTTGGATTTGTTCACTGTGTGTGGAACAGAAGAGCATGAGGAACTGAGGGCTGCTCTAGTCTCTGCCTCGGTTCACTGGAGGAGCCAATGGGGCCATCACGGGATGGATGACCCCAGGAGAAGAAGCAGGCAGGGGAGATGTTTATAAGATGGACAA-CTGGCCTCAG-AGAAAGCAGAG-CCTCCCTCTGGGCCTGAGTATGTGG-TTTCGTTCCTCCCAAACAC-TTCCTCCGTCTG-ACTTCCTTAGTTCTAGA i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45571352 564 + 49145316 AGGGAGGAGCCATGTTTTCTGGCGCTGGAGATGTTAGCTTAGTCCTGGTCATCAACATCATGAACATCAGGCAGATATACTTGTGTCTTATTTGGAGGAAGATTCAGACCCGGGGGAGGATTTTGACCAA------GGAAGAGTC------AGCCACAGATAAGGTC---------GGGGGCTGTGAGAATACAAGA--TCAGCATGGAGTGAGGTCTTGGAGTAG-GGACCAG-GAGGAGGCTGATGTGATGGTACAGACAGGCTGTCTTCAGTCTCCAG-TGAGCTTGCGCTGTGGG-ATGGACCAGCGGATGTGGGCGAGGAGGGCTGAAGGGTAC-AACTGCTTGGATGTGTTCACTGTATGTGAAGCAAAAG----CGAGTAACTAGGGTCTGTTTCATTCTCTGCCTCAGTTCACTGGAGCAGCCCATGGTGCTATCACAGGAGGAATGACCCT-GGTCAGGAACCAGGCTAGGGAGGTATTTATAAGGCTGTCAA-CGGACTGCAG-AGGAAGTGCTA-CCTCCCTCCTGGGCCTGCTGTCTGG-TTTCGCTTCTCCAAAGCAC-TTCTTCCCTCTGAAATTTCTTAtttcttta i calJac3.chr22 C 0 I 1966 s canFam3.chr1 103003210 514 + 122678785 AGAGGGGAGTTGTGTTTGCTGGGGCTAGTGGGTTTAGCTCTGGCCTGATGGTCACAGCCTTAAAGATGAGATAGTGCAACTTATATCTT-TCTGAAGGAGAGT--------GTGGGAGGGTTTTGAGCATCCCACAGGATGAGCCCAGCCTGGTGATTAGTAGGGTCTTCTAATCTAGAGGTGGTGAGAGGAATG-----CAATGGGGAGAGGGGGGCCTGCTTGGAGGAGCAGTGGGGAGGCTGATCTGCTGACGCACACAGACT-TCTTGAGTCTTGCG-------------------ATGGGTT---GGACATTTTTAAGAAGGTCTCAAGAGGCA-TGGTG------------------GTGTGTATCCAGAG-------------------------ACTCTCTGTCT--GGTGCCTGGAGGAGCCAGTGGGGCCATCCCAGGA-GGATGATCCA-GGAAAAGGCAGGGACT-GGGAGGTGATTTGAAGACAGATCATCATTTCTCAGAAGGAAGCATGACCCTTCCTCCTACCCTGGGATTGTGGATTTTCTTTGTACCCCACAC-TTCCCTTCACTG-ACTTCCTTATTTCTGTA i canFam3.chr1 n 10348 C 0 e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=16100.000000 s hg38.chr19_GL949747v2_alt 329384 11 + 729520 AGTAGCAGCAC s panTro4.chr19 59279742 11 + 63644993 AGTAGCAGCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56153634 11 + 60714840 AGTAGCAGCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102901457 11 - 106955855 AGTAGCAGCAC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55454464 11 + 59248254 ATTAGCAGCAC i macFas5.chr19 C 0 I 15 s papAnu2.chr19 47538640 11 + 51301725 ATTAGCAgcac i papAnu2.chr19 C 0 I 15 s canFam3.chr1 103003724 9 + 122678785 AGT--CAGCAC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=53021.000000 s hg38.chr19_GL949747v2_alt 329395 116 + 729520 Cagaacgcgatcatgtctgttgcagagatgtgaatggagctggaggtcattatccttagtaaacaaacacaggaacagaaaaccaaataccacatgttctcacttataagtgggaa s panTro4.chr19 59279753 116 + 63644993 Cagaaggcgatcatgtctgttgcagagatgtgaatggagctggaggtcattatccttagtaaacaaacacaggaacagaaaaccaaataccacatgttctcacttatacgtgggaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56153645 116 + 60714840 Cagaaggcgatcatgtctgttgcagagatgtgaatggagctggaggtcattatccttagtaaacaaacacaggaacagaaaaccaaataccacatgttctcacttataagtgggaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102901468 116 - 106955855 Cagaaggcgatcacgtctgctgcagagatgtgaatggagctggaggtcattatccttagtaaacaaacacaggaacagaaaaccaaataccacatgttctcacttataagtgggaa i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 103003733 26 + 122678785 --------------------------------------------CATCTTTCTCTTCA-----------------------------------------TCACTCCTAAAC----- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e papAnu2.chr19 47538651 15 + 51301725 I e macFas5.chr19 55454475 15 + 59248254 I e rheMac3.chr19 60163838 241 + 64156825 I a score=235568.000000 s hg38.chr19_GL949747v2_alt 329511 244 + 729520 ctCCATCAA-ATCTCCAAGTCATTT----------ACAACCTCTTCTTCCCCTGTCCATAACTCTTCATTTGATACCGTGAATTCTGTCTCCATGCTTTGGGCCAAAGCATTCACTGGAAGAAATTCCCAAGCTTTGGTTTAAGGCATGAGGGTTCATACTTACTGTCAGTTGACCTTCAGCAGGTGACATCCTCCCCTGCCCCATCCATTTTCCTCGTTGTAGGAAGATGGTAATTAACCCTCCCGTCAAG-ttt s panTro4.chr19 59279869 245 + 63644993 ctCCATCAA-ATCTCCAAGTCATTT----------AAAACCTCTTCTTCCCCTGTCCATAACTCTTCATTTGATACCGTGAATTCTGTCTCCATGCTTTGGGCCAAAGCACTCACTGGAAGAAATTCCCAAGCTTCGGTTTGAGGCATGAGGGTTCAcacttactgtcagttgaccttcagcaggtgacatcttcccctgccccatccattttcctcattgtaggaagatggtaatTAACCCTCCCGTCAAGtttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56153761 244 + 60714840 ctCCATCAA-ATCTCCAAGTCATTT----------ACAACCTCTTCTTCCCCTGTCCATAACTCTTCATTTGATACAGTGAATTCTGACCCCATGCTTTGGGCCAAAGCACTCACTGGAAGAAATTCCCAAGCTTCAGTTTAAGGCATGAGGGTTCATACTTACTGTCAGTTGACCTTCAGCAGGTGACATCCTCCCCCGCCCCATCCATTTTCCTGGTTGTAGGAAGATGGTAATTAACCCTCCCATCAAG-ttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102901584 241 - 106955855 ctGCATCAA-ATCTCCAAGTCATCT----------ACAATCTCTTCTTCCCCTGTCCATAACTCTTCATTTGATACGGTGAATTCTGTCTCCATGCTTTGGACCAAAGCACTCACTGGAAGAAATTCCCAAGCTTCAGTTTAAGGCATGAGGGTTCATACTTACTGTCAGTTGACCTTTAGCAGGTGACATCCTCCTCTGCCCCGTCCATTTTCCTTGTTGTAGGAAGACGGTAATTAACTCTCCCGTCAAG---- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55454490 243 + 59248254 CTCCTTTAACACCTCTGATTCATTTCTATCTCCTCACTACTTCTTCTCCCACTGCCTGGAACTCTGCATCTGATGCTGTGGATTCTGCCTCCACGCTTTTAGCGAGAGCAAACACTGGAGGAAATTCACAGGTTTCAGCGTAAGACACGGAAG-CCATA-TTACGGACAGTCGAGCTTCAGCAGGTAACATCCCTCA---------CCATTCTCCTCA-TGTAGAAAGATGATGATGATCTCTCCTTTCAAG-CCt i macFas5.chr19 I 15 C 0 s papAnu2.chr19 47538666 244 + 51301725 ctcctttaaCACCTCTGATTCATTTCTACCTCCTCACTACCTCTCGTCCCACTGCCTGGAACTCTGCATCTGATGCTGTGGATTCTGCCTCCACGCTTTTAGCGAGAGCAAACACTGGAGGAAATTCACAGGTTTCAGCGTAAGACATGGAGG-CCATA-TTACGGACAGTCGAGCTTCAGCAGGTAACATCCCTCA---------CCAGTCTCCTCATTGCAGAAAGATGATGATGATCTCTCCtttcaag-cct i papAnu2.chr19 I 15 C 0 s canFam3.chr1 103003759 229 + 122678785 --------------CTGAGTCATTTCTGCCTCCTCAGGGCTCTATCTTCCCCTGGGCAGGGCTCTCCATCCCATACTGGGAATTACTTCTCCAGGCACAGGGTAAGAGCACGAGTTAGAGGTAATTCAGAGGTTTAA--TTAAAGTTAGAGCTAAAAta-ctactgtcaat----ctttagcagatacttaccctttctgagtcttctgttcttcatagtgacgaaa-----tagtggcctctcctctcagg-att i canFam3.chr1 C 0 n 0 e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=150589.000000 s hg38.chr19_GL949747v2_alt 329755 166 + 729520 ttttgttttgttttttgttttttttttt--cctgacagcgtctcatgctgtcacccaggctggagtgcaatggcacgatctctgctcactgcaaccttgacttcctgggttcaagcgattctcctgcctcagcctcctgggtagctgggattacaggcatgcaccact s panTro4.chr19 59280114 168 + 63644993 ttttgttttgttttttgttttttttttttccctgacagcgtctcatgctgtcacccaggctgcagtgcaatggcacgatctctgctcactgcaaccttgacctcctgggttcaagcgattctcctgcctcagcctcctgggtagctgggattacaggcatgcaccact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56154005 157 + 60714840 t----ttttgttttttgttttct-------cccgatagcgtctcatgctgtcacccaggctggagtgcaatggcaccatctctgctcactgcaaccttgacctcctgggttcaagcgattctcctgcctcagcctcctgggtagctgggattacagggatgcaccact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102901825 151 - 106955855 -----ttttgttttttttttt---------tgagacggagtctcgctctgtcacccaggctggagtgcagtggcacgatctcggctcactgcaacctccacctcctgggttcaagccattctcctgcctcagcctcccgagtagcttggactacagg--tgc-ccacc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55454733 161 + 59248254 t----ttttttttttttttttttttttt--ggagacagagtctcactctgt-ggccaggctggagtgcagtggtgcgatctcgactcactgtgttctccacctcccgggttcaagagattctcttgcctcagcctcccaagtagctgggactacaggcacgcaccacc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47538910 156 + 51301725 t----tttttttttttttttttt--------gagacagagtcttgctctgtcacccaggctggagtgcagtggccggatctcagctcactgcaagctcctcctctcgggtttacgccattctcctgcctcagcctcccgagtagctgggactacaggcacccgccact i papAnu2.chr19 C 0 N 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=1476.000000 s hg38.chr19_GL949747v2_alt 329921 2 + 729520 gc s panTro4.chr19 59280282 2 + 63644993 gc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56154162 2 + 60714840 gc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102901976 2 - 106955855 gc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55454894 2 + 59248254 ac i macFas5.chr19 C 0 N 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=2673.000000 s hg38.chr19_GL949747v2_alt 329923 8 + 729520 caagcgtg s panTro4.chr19 59280284 8 + 63644993 caagcgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56154164 8 + 60714840 gAAgcgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102901978 8 - 106955855 cacgcctg i nomLeu3.chr10 C 0 I 4830 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=126155.000000 s hg38.chr19_GL949747v2_alt 329931 505 + 729520 tccatgtgaagagaccagcaaacaggctttgtatgagcaataaagcttttaattcacctgggtgcaggtggactgagtctgagaaaggagtcagcgaagggagatggggaaggggttgctttataggagttgggtaggtga-ggaaaattacggtaaaaggtggtcatctattgttggcagaggaggaggtcacaaggtacctggtggggacatcataagacttattatccagaagaagaatgtcacaaagttgattgatcggttaaggtggggcagggacaagtcacagtggtggaacgtcgtaatgttggttaatcagttaaggcaggaactggctgttttacttcttttgtggtttttcggctgccccagacttcttggctccttcaggccatctgggtgtatatgtgcaggtcacagggattacaatagctgagcttcagctcagaggcctgacaaccaccacactggccaa-ttttttttttttttaatttttagtagagac s panTro4.chr19 59280292 504 + 63644993 tccatgtgaatagaccagcaaacaggctttgtatgagcaataaagcttttaattcacctgggtgcaggtggactgagtctgagaaaggagtcagcgaagggagatggggaaggggttgctttacaggagttgggtaggtgatggaaaattacggtaaaaggtggtcatctattgttagca---gagcaggtcacaaggtacatggtggggagatcataagacttattatccagaagaagaatatcacaaagttgattgatcggttaaggtggggcagggacaattcacaatggtggaatgtcgtaatgttggttaatcagttaaggcaggaactggctgttttacttcttttgtggtttttcggctgccccagacttcttggctccttcaggccatctgggtgtatatgtgcaggtcacaggggttacaatagctgagcttcagctaggaggcctgacaaccaccacactggccaatttttttttttttttaatttttagtagagac i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 56154172 506 + 60714840 tccatgtgaagagaccagcaaacaggctttgtgtgagcaataaagcttttaattcacctgagtgcagacggactgagtctgagaaaggagacagcgaagggagatggggaagggattgctttataggagttgggtgggtaatggaaaatgacggtaaaaggtggtcatctattgtcagcagaggaggaggtcacgaggtacatggtggggaggtcataagacttattatccagaagaagaatgtcacaaaatcgattgatcagttaagatggggcagggacaagtcacagtggtggaatgttgtaatgttggttaatcggttaaggcaggaactggctgttttacttcttttgtggttttttggctgcccaagactccttggctccttcaggccgtgtggacgtatatgtgcaggtcacaggggttacaatggctgagctttggctcagagtcctgacaACCACCACACTAATTTT-TTTTTTTTCtttttaatttttagtagagac i ponAbe2.chr19 C 0 I 5140 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e nomLeu3.chr10 102901986 4830 - 106955855 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=16163.000000 s hg38.chr19_GL949747v2_alt 330436 57 + 729520 ggtttcaccatgttggccaggctggtcttggactcctgacttcaggtgatctgctcg s panTro4.chr19 59280798 57 + 63644993 ggtttcaccatgttggccaggctggtcttggactcctgacttcaggtgatctgctcg i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 56159818 57 + 60714840 ggtttcaccatgttggccaggctggtcttgaactcctgacttcaggtgatctgctcg i ponAbe2.chr19 I 5140 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e nomLeu3.chr10 102901986 4830 - 106955855 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=293609.000000 s hg38.chr19_GL949747v2_alt 330493 553 + 729520 ccttggcctcccaaa-gtgctgggattacaggcgtgagccaccatgcctgaccTAAACCTTTAAAAGTGGATACTTGTGTGAGAGAGAGAAACCATGCAGAAGAGATTAAATAAAATTAGACGGATATAATTGTGTCTTGTTTCTTGTTTTGGTTTAGAAATATAAGTGTATTTTCTTGAATAGATATGATGCAAAAATATTTTTAAATATAACTCATAAACTTAAAGATAAAACCTAAAGAAAAAGAAAATGCggtaaaacaggtgggaggggaagcaggaaaggcaggcacact-cgtgtaactgtgattgaaagaaaatctgtatacaagtggacctgcacagttcaaacctgtggagttcaaagctcaactgTATGTTACTGCAAATGATTATAAGTGCTGTTATAGAAACATTCAAAGACCAGAAAAGGAccacaatggctgaccacacatagccaggaagagcttctcccaccgagagaccaagccatcaagaagaccagaatgctctgggcagatcttctgaaagagggcgctgagggtggatggaga s panTro4.chr19 59280855 553 + 63644993 ccttggcctcccaaa-gtgctgggattacaggcgtgagccaccatgcctgaccTAACCCTTTAAAAGTGGATACTTGTGTGAGAGAGAGAAACCATGCAGAAGAGATTAAATAAAATTAGACGGATATAATTGTGTCTTGTTTCTTGTTTTGGTTTAGAAATATAAGCGTATTTTCTTGAATAGATATGATGCAAAATTATTTTTAAATATAACTCATAAACTTAAAGATAAAACCTAAAGAAAAAGAAAATggggtaaaacaggtgggaggggaagcaggaaaggcaggcacatt-tgtgtaactatgattgaaagaaaatctgtatacaagtggacctgcacagttcaaacctgtggagttcaaagctcaactgTATGTTACTGCAAATGATTATAAGTGCTGTTACAGAAACATTCAAAGACCAGAAAAGGAccacaatggctgaccacacatagccaggaagagcttctcccaccgagagaccaggccatcaagaagaccagaatgctctgggcagatcttctgaaagagggcgctgagggtggatggaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56159875 553 + 60714840 ccttggcctcccaaa-atgctgggattacaggcgtgagccaccatgcctggccTAAACCTTTAAAAGTGGATACTTGTGTGTGAGAGAGAAACCATGCAGAGGAGATTAAATAAAATTAGATGGATATAATTGTGTCTTGTTTCTTGTTTTGGTTTAGAAATATAAGTGTATTTTCTTGAATAGATATGATGCAAAAATATTTTTAAATATAACTCATAAACTCAAAGATAAAACCTAAAGAAAAAGAAAATggggtaaaacaggtaggaggggaagcaggaaaggcaggcacact-cgtgtaattatgattgaaagaaaatctgtatacaagtggacctgcacagttcaaacctgtggagttcaaagctcaactgTATGTTATTGCAAATGATTGTAAGTGCTGTTATAGAAACATTCAAAGACCAGAAAAGGAccacaatggctgaccacacatagccaggaagagcttctcccaccgagagaccagaccatcaaaaagaccagaacgctctgggaagatcttctgaaagagggcgttgagggtggatggaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102906816 555 - 106955855 ctttgccctcccaaaggtgctgggattacaggcatgagccaccatgcctggccTAAACCTTTAAAAGTGGATACTTGTGTGTGAGAGAGAAACCACGCAGAAGAGATTAAATAAAACTAGACGGATATAATTGTGTCTTGTTTCTTGTTTTGGTTTAGAAATATAAGTGTATTTTCTTGAATAGGTATGATGCAAAAATATTTTtaaatataactcataaacttaaagataaaacctaaagaaaaagaaaaTggggtaaaacaggtgggaggggaagcaggaaaggcaggcacactccgtgtaactatgattgaaagaaaatctgtatataagtggacctgcacagttcaaacctgtggagttcagagctccactgTCTATTATTGCAAATGATTGTAAGTGCTGTTATAGAAACATTCAAAGACCAGAAAAGGAccacaatggctgaccacacatagccagggagagcttctcccaccgagagaccagaccatcaagaagaccagaacgccctgggcagatcttctggaagagggcgttgagggtggatggagg i nomLeu3.chr10 I 4830 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=4859.000000 s hg38.chr19_GL949747v2_alt 331046 20 + 729520 gaggacacagatcctgagga s panTro4.chr19 59281408 20 + 63644993 gaggacacagatcctgagga i panTro4.chr19 C 0 I 124 s nomLeu3.chr10 102907371 20 - 106955855 gaggacgcagatcctgcggg i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=16295.000000 s hg38.chr19_GL949747v2_alt 331066 63 + 729520 tggatggagggaggacacagatcctgaggatgcatggagGGAGGACACAGATCCTGAGGATGG s panTro4.chr19 59281552 63 + 63644993 TGGATGGAGGGAGGACACAGATCCTGAGGATGGATGGAGGGAGGACACAGATCCTGAGGATGC i panTro4.chr19 I 124 C 0 s nomLeu3.chr10 102907391 63 - 106955855 tggatggagggaggacgcAGATCCTGAGGGTGGATGGAGGGAGGACGCAGATCCTGAGGGTGG i nomLeu3.chr10 C 0 T 30 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=12273.000000 s hg38.chr19_GL949747v2_alt 331129 45 + 729520 ATGGAGGGAGGACGCAGATCCTGAGGATGGATGGAGGGAGGACGC s panTro4.chr19 59281615 45 + 63644993 ATGGAGGGAGGACGCAGATCCTGAGGATGGATGGAGGGAGGACGC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102907424 45 - 106955855 ATGGAGGGAGGACGCAGATCCTGAGGGTGGATGGAGGGAGAAcac i nomLeu3.chr10 T 30 T 90 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=21519.000000 s hg38.chr19_GL949747v2_alt 331174 94 + 729520 AGATCCTGAGGGTGAATGGATGGAGGACGCAGATCCTGAGGGTGGACGGATGGAGGGAGGACGCAGATCCTGAGGATGGATGGAGGGAGGACGC s panTro4.chr19 59281660 90 + 63644993 AGATCCTGAGGATGGATGGAGGGAGGACGCAGATCCTGAGGGTGGATGGATGGAGG----ATGCAGATCCTGAGGATGCATGGAGGGAGGACGC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102907379 90 - 106955855 agatcctgcgggtggatggagggaggacgcAGATCCTGAGGGTGGATGGAGGGAGG----ACGCAGATCCTGAGGGTGGATGGAGGGAGAAcac i nomLeu3.chr10 T 90 T 60 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=6095.000000 s hg38.chr19_GL949747v2_alt 331268 22 + 729520 AGATCCTGAGGATGGATGGAGG s panTro4.chr19 59281750 22 + 63644993 AGATCCTGAGGGTGGATGGAGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102907409 22 - 106955855 AGATCCTGAGGGTGGATGGAGG i nomLeu3.chr10 T 60 C 0 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=11928.000000 s hg38.chr19_GL949747v2_alt 331290 22 + 729520 GAGGACACAGATCCTGAGGATG s panTro4.chr19 59281772 22 + 63644993 GAGGACACAGATCCTGAGGATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56160428 22 + 60714840 gaggacacagatcctgaggatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102907431 22 - 106955855 GAGGACGCAGATCCTGAGGGTG i nomLeu3.chr10 C 0 I 1 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=300.000000 s hg38.chr19_GL949747v2_alt 331312 1 + 729520 C s panTro4.chr19 59281794 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56160450 1 + 60714840 c i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e nomLeu3.chr10 102907453 1 - 106955855 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=78349.000000 s hg38.chr19_GL949747v2_alt 331313 149 + 729520 ATGGAGGGAGGAcaccacgcccagctaatttttgtctttttaatagagatggggtttcaccatgttggccaggctggtctcaaactcctgacctcgtgatccgcccgcctcagtctcccaaagtgctgggattacaggcgtgagccacc s panTro4.chr19 59281795 149 + 63644993 ATGGAGGGAGGATaccacgcctggctaatttttgtctttttaatagagacggggtttcaacatgttggccaggcttgtctcaaactcctgacctcgtgatccgcccgcctcagtctcccaaagtgctgggattacaggtgtgagccacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56160451 149 + 60714840 atggagggaggacaccacgcccagctaatttttgtctttttagtagagacggagtttcaacatgttggccaggctggtctcaaactcctgacctcgtgttctgcccgcctcagcctcccgaagtgctgggattacaggtgtgagccacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102907454 149 - 106955855 ATGGAGGGAGAAcaccacgctcggctaatttttgtctttttagtagagacggggtttcaacatgttggccaggctggtctcaaactcctgacctcgtgatccgcctgcctcagcctcccaaagtgctgggattacaggcgtgagccacc i nomLeu3.chr10 I 1 N 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=2711.000000 s hg38.chr19_GL949747v2_alt 331462 10 + 729520 gcgcctggcc s panTro4.chr19 59281944 10 + 63644993 gcgcctggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56160600 10 + 60714840 gcacctggcc i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=2345.000000 s hg38.chr19_GL949747v2_alt 331472 2 + 729520 GG s panTro4.chr19 59281954 2 + 63644993 GG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56160610 2 + 60714840 GG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55263083 2 + 59248254 GA i macFas5.chr19 N 0 C 0 s papAnu2.chr19 47353969 2 + 51301725 GG i papAnu2.chr19 N 0 C 0 s chlSab2.chr6 47062942 2 + 50890351 GG i chlSab2.chr6 I 239 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e rheMac3.chr19 60163838 241 + 64156825 I a score=5922.000000 s hg38.chr19_GL949747v2_alt 331474 3 + 729520 CTT s panTro4.chr19 59281956 3 + 63644993 CTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56160612 3 + 60714840 CTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60164079 3 + 64156825 CTT i rheMac3.chr19 I 241 C 0 s macFas5.chr19 55263085 3 + 59248254 CTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47353971 3 + 51301725 CTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47062944 3 + 50890351 CTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I a score=422895.000000 s hg38.chr19_GL949747v2_alt 331477 214 + 729520 TCTTAGTCATGTTTAATTTAAC-GAAAATTTTATAATGATCT-GAAATGTAAATGGTTTTTAAAGAATTCAAATTAGGATGCATCAAAAATA--GGACTGTCTTTATTGTTGAAAAACATTGT-ATTTCTT-----TA-----ATAATGAACAACTTATTAAGTTATGATGTGATTTAACTGGTATGAAAATTTGGGAAAT--TAGAATCTTGGTAAAGTACAGATTAGTT s panTro4.chr19 59281959 219 + 63644993 TCTTCGTCATGTTTAATTTAAC-GAAAATTTTATAATGATCT-AAAATGTAAATGGTTTTTAAAGAATTCAAATTAGGATTCATCAAAAATA--GGACTGTCTTTATTCTTGAAAAACATTGT-ATTTCTT-----TACTCTAATAATGAACAACTTAATAAGTTATGATGTGATTTAACTGGTATGAAAATTTGGGAAAT--TAGAATCTTGGTAAAGTACAGATTAGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56160615 215 + 60714840 TCTCAGTCATGTTTAATTTAACAGAAAATTGTATAATTATCT-AAAATGTAAATGGTTTTTAAAGAATTCAAATTAGGATTCATCAAAAATA--GGACTGTCTTTATTCTTGAAAAACATTGT-ATTTCTT-----TA-----ATAATGAGCAAGTTATTAAGTTATGATGTGATTTAACTGGTATGAAAATTTGGGAAAT--CAGAATCTAGGTAAAGTACAGATTAGTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103095045 208 - 106955855 TTTTAGCCATATTTAACTTGACATACTATTTTATAATTACCTAAAAATTTAGATGCATTGCAAAA-----ACATTAGGATTTACCAAAACAA--GAACAGTATTTTT------ATAATATTTTAACTGGTT-----TA-----ATAATTAAAAAGTTGTTAAGCTACAACGGGATTTAACCATCATTAAAATTTGGAAAATACTAGAATCTTGGTAAAGTGTAGATTAGTT i nomLeu3.chr10 N 0 N 0 s rheMac3.chr19 60164082 215 + 64156825 TCTTAGTCATGTTTAATTTAACAGAAAATTTTATAAGTATCC-AAAATGTAAATGGTTTTTAAAGAATTCAAATTGGGATTCATCAAAAATA--GGACTGTCTTTATTCTTGAAAAACACTGT-ATTTGTT-----TA-----ATAATGAACAAGTTATTAAGTTACGATGTGATTTAACTGGTATGAGAATTTGGGAAAT--TAGAATTTTGGTAAAGTACAGATTAGTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55263088 215 + 59248254 TCTTAGTCATGTTTAATTTAACAGAAAATTTTATAAGTATCC-AAAATGTAAATGGTTTTTAAAGAATTCAAATTGGGATTCATCAAAAATA--GGACTGTCTTTATTCTTGAAAAACACTGT-ATTTGTT-----TA-----ATAATGAACAAGTTATTAAGTTACGATGTGATTTAACTGGTATGAGAATTTGGGAAAT--TAGAATCTTGGTAAAGTACAGATTAGTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47353974 222 + 51301725 TCTTAGTCATGTTTAATTTAACAGAAAATTTTATAAGTATCC-AAAATGTAAATGGTTTTTAAAGAATTCAAATTAGGATCCATCAAAAATATGTGACTGTCTTTATTCTTGAAAAACATTGT-ATTTGTTTACTCTA-----ATAATGAACAAGTTATTAAGTTACGATGTGATTTAACTGGTATGAGAATTTGGGAAAT--TAGAATCTTGGTAAAGTACAgattagtt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47062947 220 + 50890351 TCTTAGTCATGTTTAATTTAGCAGAAAATTTTATAAGTATCC-AAAATGTAAATGGTTTTTAAGGAATTCAAATTAGGATCCATCAAAAATA--GGACTGTCTTTATTCTTGAAAAACTTTGT-ATTTGTTTACTCTA-----ATAATGAACAAGTTATTAACTTATGATGTGATTTAACTGGTATGAGAATTTGGGAAAT--TAGAATCTTGGTAAAGTACAGATTAGTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I a score=785543.000000 s hg38.chr19_GL949747v2_alt 331691 444 + 729520 AAAAGAAAAAGATGCTTTAGAAAAATCAAAGACATTTCCGAAAGAATGTACAATAATCAATAGCAGTTTGGCCCCAGTGTTATAGAGGATGGGGAGAAGGTGGAAGAATGAGAAAATAACACGCATTTCACGTAGTATATGTGCACAAATCTTTTTCTTTTGTTGCGAAGAAAATGTTTTATCACAACAAATGTAATAAATTTAGCAACTTTGTTCTGGAGATCAATCAATAAATCCAAATAGGAGAAGGAGGAGGGGTCTGTAAAAGCAGAAAGCAATTTCAGAAATGAATATATATAGTGTACTAAATAAATTGAGCTGGATGGTAAATAAAGGCAACAAGAAAATATCTGTGAATCCTAGACCAGCTGTGATGATGGCTCTGTATGCCCTTAAATAACGGCAATAATTCATGAAAAAATAAAGACCTTGTCCTTTCTTTAT s panTro4.chr19 59282178 443 + 63644993 AAAAGAAAAAGATGCTTTAGAAAA-TCAAAGACATTTCCGAAAGAATGTACAATAATCAATAACAGTTTGGCCCCAGTGTTATAGAGGATGGGGAGAAGGTGGAAGAATGAGAAAATAACAAGCATTTCATGTAGTATATGTGCACAAATCTTTTTCTTTTGTTGCGAAGAAAATGTTTTATCACAACAAATGTAATAAATTTAGCAACTTTGTTCTGGAGATCAATCAATAAATCCAAATAGGAGAAAGAGGAGGGGTCTATAAAAGCAGAAAGCAATTTCAGAAATGAATATATATAGTGTACTAAATAAATTGAGCTGGATGGTAAGTAAAGGCAACAAGAAAATATCTGTGAATCCTAGACCAGCTGTGATGATGGCTCCGTATGCCCTTAAATAACGGCAATAATTCATGAAAAAATAAAGACCTTGTCCTTTCTTTAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56160830 439 + 60714840 AAAAGAAAAAGATGCTTTACAAAA-TCAAAAACATTTCTGAAAGAATGTACAATAATCAGTAACAGTTTGGCCCCAGTGTTATAGAGGATGGGGAGAAGGTGGAAGAATGAGAAAATAATACGCATTTCATGTAGTATATGTGCACAAATCTTTTTCTTTTGTTGGGAAGAAAATGTTTTATCACAACAAATGTAATAAATTTAGCAACTTTGTTCTAGAGATCAATCAATAAATCCAAATAGGAGAAAGAGGAGGGGTCTATAAAAGCAGAAAGCAATCTCAGAAATG----TATATAGCGTACTAAATAAATTGAGCTGGATGGTAAATAAAGGCAACAAGAAAATATCTGTGACTCATAGACCAGCTGTGATGATGGCTCTGCACGCCCTTAAAGAACGGCAATAATTCATGAAAAAGTAAAGACCTTCTCCCTTCTTTAT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60164297 439 + 64156825 ----GAAAGAGATGCTTTAGAAAA-TCAAAGACATTTCTGAAAGAATGTATAATAACCAATAACAGTTTGACCCCAGTGTTATAGAGGATGGGGAAAAGGTGGAAGAATGAGAAAATAATACACATTTCATGTAGTCTATGTGCACAAATCTTTTTCTTTTGTTGGGAAGAAAATGTTTTATCACAACAAAGATAAAAAATTTAGCAACTTTGTTCTAGAGATCAATCAATAAATCCAAATAGGAGAAAGAGGAGTGGTCTATAAAAGCAGAAAGCAATCTCACAAATGAATAGATATAGTGTACTAAATAAATTGAGCTGGATGGTAACTAAAAGCAACAAGAAAATATCTGTAAATCCTAGACCAGCTGTGATGATGGCTCCATATGCCCTTAAGGAACTGCAATAATTCATGAAAAAGTAAAGACCTTCTCCTTTCTTTAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55263303 443 + 59248254 AAAAGAAAGAGATGCTTTAGAAAA-TCAAAGACATTTCTGAAAGAATGTATAATAACCAATAACAGTTTGACCCCAGTGTTATAGAGGATGGGGAAAAGGTGGAAGAATGAGAAAATAATACACATTTCATGTAGTCTATGTGCACAAATCTTTTTCTTTTGTTGGGAAGAAAATGTTTTATCACAACAAAGATAAAAAATTTAGCAACTTTGTTCTAGAGATCAATCAATAAATCCAAATAGGAGAAAGAGGAGTGGTCTATAAAAGCAGAAAGCAATCTCACAAATGAATAGATATAGTGTACTAAATAAATTGAGCTGGATGGTAACTAAAAGCAACAAGAAAATATCTGTAAATCCTAGACCAGCTGTGATGATGGCTCCATATGCCCTTAAGGAACTGCAAAAATTCATGAAAAAGTAAAGACCTTCTCCTTTCTTTAT i macFas5.chr19 C 0 T 44027 s papAnu2.chr19 47354196 443 + 51301725 aaaagaaaaagatgctttAGAAAA-TCAAAGACATTTCTGAAAGAATGTATAATAACCAATAACAGTTTGACCCCAGTGTTGTAGAGGATGGGGAGAAGGtggaagaatgagaaaataatacacatttcaTGTAGTATATGTGCAcaaatcttttccttttgttggGAAGAAAATGTTGTATCACAACAAAGATAATTAATTTAGCAACTTTGTTCTAGAGATCAATCAATAAATCCAAATAGGAGAAAGAGGAGTGGTCTATAAAAGCAGAAAGCAGTCTCACAAACGAATAGATATAGTGTACTAAATAAATTGAGCTGGATGGTAAATAAAGGCAACAAGAAAATATCTGTGAATCCTAGACCAGCTGTGATGATGGCCCCGTATGCCCTTAAAGAACTGCAATAATTCATGAAAAAGTAAAGACCTTCTGCTTTCTTTAT i papAnu2.chr19 C 0 T 27232 s chlSab2.chr6 47063167 443 + 50890351 AAAAGAAAAAGATGCTTTAGAAAA-TCAAAGACATTTCTGAAAGAATGTATAATAACCAATAACAGTTTGACCCCAGTGTTGTAGAGGATGGGGAGAAGGTGGAAGAATGAGAAAATAATACACATTTCATGTAGTATATGTGCACAAATCTTTTCCTTTTGCTGGGGAGAAAATGTTGTATCACAACAAAGATAATTAATTTAGCAACTTTGTTCTAGAGATCAATCAATAAATCCAAATAGGAGAAAGAGGAGTGGTCTATCAAAGCAGAAAGCAATCTCACAAATGAATATATACAGTGTACTAAATAAATTGAGCTGGATGGTAAATAAAGGCAACAAGAAAATATCTGTGAATCCTAGACCAGCTGTGATGATGGCTCCGTATGCCCTTAAAGAACTGCAATAATTCATGAAAAAGTAAAGACCTTCTGCTTTCTTTAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I a score=1419.000000 s hg38.chr19_GL949747v2_alt 332135 5 + 729520 CAAAG s panTro4.chr19 59282621 5 + 63644993 CAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56161269 5 + 60714840 CAAAG i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47063610 0 + 50890351 C e papAnu2.chr19 47354639 27232 + 51301725 T e macFas5.chr19 55263746 44027 + 59248254 T e rheMac3.chr19 60164736 0 + 64156825 C a score=2357.000000 s hg38.chr19_GL949747v2_alt 332140 7 + 729520 TGAttta s panTro4.chr19 59282626 7 + 63644993 TGTttta i panTro4.chr19 C 0 I 4 s ponAbe2.chr19 56161274 7 + 60714840 TGAtttt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47327407 7 + 51301725 tggttta i papAnu2.chr19 T 27232 I 4 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47063610 0 + 50890351 C e macFas5.chr19 55263746 44027 + 59248254 T e rheMac3.chr19 60164736 0 + 64156825 C a score=107807.000000 s hg38.chr19_GL949747v2_alt 332147 184 + 729520 ttatttatttatttatttattttttagagacagagtctcgctctgtcacacccaggctggagtgcagtggctcgatctcagctcactgcaagctccgcttcctgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcacctgccaccacgcccggctaattttttt s panTro4.chr19 59282637 181 + 63644993 ttatttatttatttatttattttttagagacagagtctggctctgt--cacccaggctggagtgcagtggctctatctcagctcactgcaagctccacctcccgggctcacgccattctcctgcctccgcctcctgagtagctgggactacaggcgcccgccaccacgcccggctaa-tttttt i panTro4.chr19 I 4 C 0 s ponAbe2.chr19 56161281 163 + 60714840 ---------------ttttttttttagagacacagtctcactgtgt--cgccgaggctggagtgcagtggtgcgatcttggctcactgcaagctccgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccg---ccacactcggctaa-tttttt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55219719 176 + 59248254 ttatatgtcttttt-tttttccccctgagttggagtctcactgt----tacccaggctggagtgcagcggtgtgatctcagctcactgcaacctctgacgcgtgggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggtgcccatcaccacgcccagct---cttttt i macFas5.chr19 T 44027 C 0 s papAnu2.chr19 47327418 176 + 51301725 tctttttttttttt-ttttttttcctgagttggagtctcactat----tacccaggctggagtgcagtggtgtgatcttagctcactgcaacctctgatgcctgggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcacccatcaccacgcccggct---cttttt i papAnu2.chr19 I 4 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47063610 0 + 50890351 C e rheMac3.chr19 60164736 0 + 64156825 C a score=53012.000000 s hg38.chr19_GL949747v2_alt 332331 116 + 729520 gtattcttagtatagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgcctcagcctgccaaagtgctgggattacaggcgtgagccact s ponAbe2.chr19 56161444 116 + 60714840 gtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctgctgacctcgtgatctgcccacctcgacctgccaaagtgctgggattacaggcatgagccacc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55219895 116 + 59248254 gtatttttagcagagtcggggtttcaccatgttggtcaagctggtcttgaacttctgacctcatgattcatccacctcagcctcccaaagtgctgagattacaggcgtgagccact i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47327594 116 + 51301725 gtatttttagcagagtcggggtttcaccatgttggtcaagctggtcttgaacttctgacctcatgattcatccacctcagcctcccaaagtgctgagattacaggcgtgagccact i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47063610 0 + 50890351 C e rheMac3.chr19 60164736 0 + 64156825 C e panTro4.chr19 59282818 0 + 63644993 C a score=7091.000000 s hg38.chr19_GL949747v2_alt 332447 10 + 729520 gcgcccggcc s ponAbe2.chr19 56161560 10 + 60714840 acgcccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102907603 10 - 106955855 gcgcccggcc i nomLeu3.chr10 N 0 C 0 s macFas5.chr19 55220011 10 + 59248254 gcgcttggcc i macFas5.chr19 C 0 I 43725 s papAnu2.chr19 47327710 10 + 51301725 acgcttgGCC i papAnu2.chr19 C 0 I 26919 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47063610 0 + 50890351 C e rheMac3.chr19 60164736 0 + 64156825 C e panTro4.chr19 59282818 0 + 63644993 C a score=1401340.000000 s hg38.chr19_GL949747v2_alt 332457 808 + 729520 CAAAGTGATTTTTatggaggtacaatttaggactaaatgaggcacattttacttctTGGAACGGCAACAGGAAAATTCCCATCCCGCAGCTCTCACAACTCAGATCTTAGCAATTGGAACAGAACAGGTTGTCACTGCTGAAGGACCAAGCAGAACAACGGTTTCAGGAAGCTTTAGCTCTAAATCCCAGTAGATGTAGAGCAGGTGCAGAGCTCTGGGGACTCTCAAAGCACTTTTAAATCTGGTTAAGTGTCAGAATTGCATTTAGACATCAACACATTTATATTCCTTGATTCTTTCTTCTCCCTAAGACTTAAACATATAGTCACCTTTTATCAAAAAGATATTTTATTTGTTTAAATGGAAGATATAGTTTACTTTCTTCACACAGATGCCAGAAATTTTCTATGAACGTAAAATCTTTGGTGCAATCAAGTGCATACTGCTTCCCAGATCCTACAAGAAAGGAGATTAAGGTGTAGAATTTTACACTCATCACAGAAAGTTTTCAGAGACTAACTGGCATCACCAACCAAAACACAACATGCTATCACCACAACTATTTTTAAATGTCTTAAGTAGTAGTTTCCATTGGACGGCAGGTGTGTAAGCAGGAGCCAAGAGTGAAACACGCTCTTGCTCCTCTTCCTAGCAAGAGAGCAAAGACTGTGAGGTTTGGTGTATTCATCCAGAGAGAGTGTTTTAAATGGGGCTATGACAGAGAAGGTAGACAAGAGGTGTTGGGCAGCCCTGGACACCCTCAGAAAATATCCCTTCTTCATGAATTTATTTTCTATGTTCAGTTTTA s ponAbe2.chr19 56161570 802 + 60714840 CAAAGTGATTTTTATGGAGGTACAATTTAGGACTAAATGAGGCACATTTTACTTCTTGGAACAGCAACAGGAAAATTCCCATCCCACAGCTCTTACAACTTAGATCTTAGCAATTGGAACAGAACAGGTTTTCACTGCTGAAGGACTGAGCAGAACAACGGTTTTAGGAAGCTTTAGCTCTAAATCCAAGTGGATCTGGAGCAGGTGCAAAGCTTTGGGGACTCTCAAAGCACTTTTAAATCTGGTTAAGTGTCAGAATTGCATTTAGACATCAACACATTTATATTCCTTGATTATTCCTCCTCCCTAAGCCTTAAACATA--GTCACCTTTTATCAAAAAGAAA----ATTTGTTTAAATGGAAGATTCAGTTTGCTTTCTTCACACAGATGCCAGAAATTTTCTATAAACATAAAATTGTGGGTGCAATCAAGTGGCTACTGCTTCCCAGATCCTATAAGAAAGGAGACTAAGGTGTAGAATTTTGTACTCATCACAGAAAGTTTTCAGAGACTAACTGGCATCACCAACCAAAATACAACATGCTATCACCACAACTATTTTTAAATGTCTTAAGTAGTAGTTTCCATTGGACAGCCGGTGTGTAAGCAGGAGCCAAGAGTAAAACACGCTCTTGCTCCTCTTCCTAGCAAGAGAGCAAAGACTGTGAGGTTTGGTGTATTCATCCAGAGAGAGTGTTTTAAGTGGGGCTATGACAGAGAAGATAGACAAGAGACGTCAGGCAGCCCTGGACACCCTCAGAAAATATCCCTTCTTCATGAATTTATTTTCTATGTTCAGTTTTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102907613 806 - 106955855 CAAAGTGATTTTTATGGAGGTACAATTTAGGACTAAATGAGGCACATTTTACTTCTTGGAACAGCAACAGGAAAATTCCCATCCTGCAGCTCTTACAACTTAGATCTTAGCAATCGGAACAGAACAGGTTTTCACTGCTGAAGGACTGAGCAGAACAACGGTTTTAGGAAGCTTTAGCTCTAAATCCCAGTGGATGTGGAGCAGGTGCAGAGCTCTGGGGACTCTCAAAGCACATTCAAATCTGGTTAAGTGTCAGAATTGCATTTAGGCATCAACACATTTATATTCCTTGATTATTCCTCCTCCCTAAGCCTTAAACATGTAGTCATCTTTTATCAAAAAGATATTTTATTTGTTTAAATGGAAGATATAGTTTACTTTCTTCATACAGATGCCAGAAATTTTCTATAAACATAAAATCGTGGGTGCAATCAAGTGCATACCGCATCCCAGATCCTATAAGAAAGGAGATTAAGGTGTAGAATTTTGTACTCATCACAGAAAGTCTTCCGAGACTAACTGGCATCACTAACCGAAATACAACATGCTATCACCACAACGATTTTTAAATGTCTTAAGCAGTAGTTTCCATTGGA-AGCCGGTGTGTAAGCAGGAGCCAAGAGTGAAACACGCTCTCACTCCTCTTCCCAGCAAGAGAGCAAAGACTGTGAGGTTTGGTGTCTTCATCCGGAGAGAGTGTTTTAAATGGGGCTATGAGAGAG-AGGTAGACAAGAGGTGTCAGGCAGCCCTGGACACCCTCAGAAAATATCCCTTCTTCATGAATTTATTTTCTATGTTCAGTTTTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60164736 787 + 64156825 CAAAGTGATTTTTATGGAGGTACAATGTAGGACCAAATGAGGCACGTTTTACTGCTTGGAACAGCAACAGGAAAATTCTCATCCCGCAGCTCTTACAGCTTAGATCTTAGCAATCGGAACAGAACAGGTTTTCACGGCTGAAGGACTGAGCAGAACAACAGTTTTTGGAAGCTTTAGCTCTAAATCCCAGTGGATCTGGAGCAGGTGCAGAGCTTTGGGGACTCTCAAAGCACTTTTAAATCTGGTTAAGTGTCAGAATTGCATGTAGACATCAACACACTTATATTCCTTGATTATTCCTCCTCCCTAAGCCTTAAACGTATAGCCACCTTTTATCAAAAAGATATTTTATTTGTTTAAGTGGAAGATATAGTTTACTTTCTTCACACGGATGCCAGAAATTTTCT-----------ATTGTTGGTGCAATCAAGTGCATACTGCGTCCCAGATCCTATAACAAAGGAGATGAAGGTGTATAATTTTATACTCATCACAGAAAGTTTTCAGAGACTAACTGGCATCACCAACCAAAATACAACGTGCTACCACCACAACTATTTTCAAATGTCCTCAGTAGTAGTTTCCACTGGACAGCAGGTGTGTAAGCAAGAGCCAAGAGTGAAACATG---------CTCTTCCTAGCAAGAGAGCAAAGACTGTGCGGTTTGGTGTATTCATCCAGAGAGAGTGTTTTAAATGGGGCTATGACAGAGAAGGTA-ACAAGAGGTGTCGGGCAGCCCTGGACACCCTCAGAAAATATCCCCGCTTCATGAATTTATTTTCTATGTTCAGTTTTG i rheMac3.chr19 C 0 I 62 s macFas5.chr19 55263746 787 + 59248254 CAAAGTGATTTTTATGGAGGTACAATGTAGGACCAAATGAGGCACGTTTTACTGCTTGGAACAGCAACAGGAAAATTCTCATCCCGCAGCTCTTACAGCTTAGATCTTAGCAATCGGAACAGAACAGGTTTTCACGGCTGAAGGACTGAGCAGAACAACAGTTTTTGGAAGCTTTAGCTCTAAATCCCAGTGGATCTGGAGCAGGTGCAGAGCTTTGGGGACTCTCAAAGCACTTTTAAATCTGGTTAAGTGTCAGAATTGCATGTAGACATCAACACACTTATATTCCTTGATTATTCCTCCTCCCTAAGCCTTAAACGTATAGCCACCTTTTATCAAAAAGATATTTTATTTGTTTAAGTGGAAGATATAGTTTACTTTCTTCACACGGATGCCAGAAATTTTCT-----------ATTGTTGGTGCAATCAAGTGCATACTGCGTCCCAGATCCTATAACAAAGGAGATGAAGGTGTATAATTTTATACTCATCACAGAAAGTTTTCAGAGACTAACTGGCATCACCAACCAAAATACAACGTGCTACCACCACAACTATTTTCAAATGTCCTCAGTAGTAGTTTCCACTGGACAGCAGGTGTGTAAGCAAGAGCCAAGAGTGAAACATG---------CTCTTCCTAGCAAGAGAGCAAAGACTGTGCGGTTTGGTGTATTCATCCAGAGAGAGTGTTTTAAATGGGGCTATGACAGAGAAGGTA-ACAAGAGGTGTCGGGCAGCCCTGGACACCCTCAGAAAATATCCCCGCTTCATGAATTTATTTTCTATGTTCAGTTTTG i macFas5.chr19 I 43725 I 1 s papAnu2.chr19 47354639 786 + 51301725 CAAAGTGATTTTTATGGAGGTACAATGTAGGACCAAGTGAGGCACATTTTACTTCTTGGAACAGCAACAGGAAAATTCCCATCCCGCAGCTCTTACAGCTTAGATCTTAGCAATCGGAACAGAACAGGTTTTCACGGCTGAAGGACTGAGCAGAACAACAGTTTTTGGAAGCTTTAGCTCCAAATCCCAGTGGATCTGGAGCA-GTGCAGAGCTCTGGGGACTCTCAAAGCACTTTTAAATCTGGTTAAGTGTCAGAATTGCATGCAGACATCAACACATTTATATTCCTTGATTATTCCTCCTCCCTAAGCCTTAAACGTATAGCCaccttttatcaaaaagatattttatttgtttaagtgGAAGATATAGTTTACTTTCTTCACATGGATGCCAGAAATTTTCT-----------ATTGTTGGTGCAATCAAGTGCATACTGCGTCCCAGATCCTATAACAAAGGAGATGAAGGTGTATAATTTTATACTCATGACAGAAAGTTTTCAGAGACTAACTGGCATCACCAACCAAAATACAACGTGCTACCACCACAACTATTTTCAAATGTCCTCAGTAGTAGTTTCCACTGGACAGCAGGTGTGTAAGCAGGAGCCAAGAGTGAAACATG---------CTCTTCCTAGCAAGAGAGCAAAGACTGTGAGGTTTGGTGTATTCATCCAGAGAGAGTGTTTTAAATGGGGCTATGACAGAGAAGGTAGACAAGAGGTGTCGGGCAGCCCTGGACA-CCTCAGAAAATATCCCCGcttcatgaatttattttctatgttcaGTTTTG i papAnu2.chr19 I 26919 I 1 s chlSab2.chr6 47063610 788 + 50890351 CAAAGTGATTTTTATGGAGGTACAATGTAGGACCAAATAAGGCACATTTTACTTCTTGGAACAGCAACAGGAAAATTCCCATCCCGCAGCTCTTACAGCTTAGATCTTAGCAATCGGAACAGAACAGGTTTTCACGGCTGAAGGACTGAGCAGAACAACAGTTTTTGGAAGCTTTAGCTCCAAATCCCAGTGGATCTGGAGCAGGTGCAGAGCTCTGGGGACTCTCAAAGCACTTTTAAATCTGGTTAAGTGTCAGAATTGCATGTAGACATCAACACACTTATATTCCTTGATTATTCCTCCTCCCTAAGCCTTAAACATATAGCCACCTTTTATCAAAAAGATATTTTATTTGTTTAAGTGGAAGATATAGTTTACTTTCTTCACACGGATGCCAGAAATTTTCT-----------ATTGTTGGTGCAATCAAGTGCATACTGCGTCCCAGATCCTATAACAAAGGAGATGAAGGTGTATAATTTTATACTCATCACAGAAAGTTTTCAGAGACTAACTGGCATCACCAACCAAAATACAACGTGCTACCACCACAACTATTTTCAAATGTCCTCAGTAGTAGTTTCCACTGGACAGCAGGTGTGTAAGCAGGAGCCAAGAGTGAAACATG---------CTCTTCCTAGCAAGAGAGCAACGACTGTGCGGTTTGGTGTATTCATCCAGAGAGAGTGTTTTAAATGGGGCTATGACGGAGAAGGTAGACAAGAGGTGTCGGGCAGCCCTGGACACCCTCAGAAAATATCCCCGCTTCATGAATTTATTTTCTATGTTCAGTTTTG i chlSab2.chr6 C 0 I 1 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e panTro4.chr19 59282818 0 + 63644993 C a score=12950.000000 s hg38.chr19_GL949747v2_alt 333265 11 + 729520 CACTaaaaggt s ponAbe2.chr19 56162372 10 + 60714840 CACTAAAAGG- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102908419 11 - 106955855 CACTAAAAGGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55264534 11 + 59248254 CACTAAAAGGT i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47355426 11 + 51301725 CActaaaaggt i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47064399 11 + 50890351 CACTAAAAGGT i chlSab2.chr6 I 1 I 734 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e rheMac3.chr19 60165523 62 + 64156825 I e panTro4.chr19 59282818 0 + 63644993 C a score=911.000000 s hg38.chr19_GL949747v2_alt 333276 11 + 729520 aaaaaaaaagt s nomLeu3.chr10 102908430 11 - 106955855 aaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55264545 11 + 59248254 tatatatatat i macFas5.chr19 C 0 I 35 s papAnu2.chr19 47355437 11 + 51301725 aaaatatatac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56162382 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47064410 734 + 50890351 I e rheMac3.chr19 60165523 62 + 64156825 I e panTro4.chr19 59282818 0 + 63644993 C a score=443.000000 s hg38.chr19_GL949747v2_alt 333287 20 + 729520 taaaaaaaagaaaaaaaaag s ponAbe2.chr19 56162382 20 + 60714840 TAAAAAAAAGGAAAAAAAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102908441 20 - 106955855 aaaaaagaaagaaaaaaaaG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60165585 20 + 64156825 tgtatatatatacacatatC i rheMac3.chr19 I 62 C 0 s macFas5.chr19 55264591 20 + 59248254 tgtatatatatacacatatC i macFas5.chr19 I 35 C 0 s papAnu2.chr19 47355448 9 + 51301725 ---atatatata-------- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47064410 734 + 50890351 I e panTro4.chr19 59282818 0 + 63644993 C a score=318394.000000 s hg38.chr19_GL949747v2_alt 333307 178 + 729520 tccaccctatagtttgtataacaaacattctcacttgttcatgctgtattcaacgtcgagcccattttctttcccctactacaaaatcccaccgctggggtcctggtacctacagtgatggttctgaataaagccctccttactctgctttgataaaggtcaccgggtaatctttctc s ponAbe2.chr19 56162402 178 + 60714840 TCCACCCTATAGTTTGTATGACAAACattctcacttgttcatgcggtattcaacgtcgagcccattttcttgcccctactacaaaatcccaccgctgtgatccttgtacctacagtgatggttctgaataaagccctccttactttgctttaacaaaggtcactgggtaatctttctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102908461 178 - 106955855 TCCACCCTATAGTTTGTATGACAAACattctcacttgttcatgctgtgttcaacgtcaagcccattttcttgcctctgctacaaaatcccaccgctgtggtccttgtacctacagtgatggttctgaataaagcccttcttatttggctttgataaaggtcactgggtaatctttctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60165605 178 + 64156825 TCCACCCTATAGTTTATATGACAAACattctcacttgttcaagctgtattcaatgtcaagcccattttatttcccctactacaaaatcccaccgctgtggtccttgtacctacggtgatggttctgaataaagccctccctactttgctttaataaaggtcactgggtaatctttctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55264611 178 + 59248254 TCCACCCTATAGTTTATATGACAAACattctcacttgttcaagctgtattcaatgtcaagcccattttatttcccctactacaaaatcccaccgctgtggtccttgtacctacggtgatggttctgaataaagccctccctactttgctttaataaaggtcactgggtaatctttctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47355457 178 + 51301725 tccaccCTATAGTTTGTATGACAAACATTCTCACTTGTTCAAGCTTTATTCAATGTCAAGCCCATTTTATTTCCCCTACTACAAAATCCCACCGTTGTGGTCCTTGTACCTACAGTGATGGTTCTGAATAAAGCCCTCCCTACTTTGCTTTAATAAAGGTCACTGGGTAATGTTTCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47065144 178 + 50890351 TCCACCCTATAGTTTATATGACAAACattctcacttgttcacgctgtattcaatgttaagcccattttatttcccctactacaaaatcccaccactgtggtccttgtacctacggtgatggttctgaataaagccctccctactttgctttaataaaggtcactgggtaatgattctc i chlSab2.chr6 I 734 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e panTro4.chr19 59282818 0 + 63644993 C a score=126759.000000 s hg38.chr19_GL949747v2_alt 333485 63 + 729520 tcaacGCCTTGCCCAGCTGGCCCAGGGCTCCAAGAAAGGGAAGGCCAGACCCCTGGCCTCTGC s panTro4.chr19 4207942 63 - 63644993 tcaacaCCCTGCCCAGCTGGTCCAATGGTCTGAGAAAGGGAAGTCCAGACACCTGGCCTCTGC i panTro4.chr19 n 0 I 1854 s ponAbe2.chr19 56162580 51 + 60714840 tcaacaCCTTGCCCAGCTGGCCCAGGGCTCCAAGAAAGGGAAGGCCAGACC------------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102908639 63 - 106955855 tcaacaCTTTGCCCAGCTGGCCCAGGGCTCCAAGAAAGGGAAGGCCAGACCCCTGGCCTCTGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60165783 61 + 64156825 tcaacaCCTTGCCCAG-TGGCCCA-GGCTCCAAGAAAGGGAAGGTCAGACCCCTGGCCTGTGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55264789 61 + 59248254 tcaacaCCTTGCCCAG-TGACCCA-GGCTCCAAGAAAGGGAAGGTCAGACCCCTGGCCTGTGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47355635 63 + 51301725 TCAACACCTTGCCCAGCTGGCCCAGGGCTCCAAGAAAGGGAAGGTCAGACCCCTGGCCTGTGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47065322 63 + 50890351 tcaacaCCTTGCCCAGCTGGCCCAGGGCTCCAAGAAAGGGAAGGCCAGACCCCTGGCCTGTGC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I a score=20268.000000 s hg38.chr19_GL949747v2_alt 333548 12 + 729520 CCTGGTTACTCA s ponAbe2.chr19 56162631 12 + 60714840 CCTGGTTACTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102908702 12 - 106955855 CCTGGTTCCTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60165844 12 + 64156825 CCTGGATACTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55264850 12 + 59248254 CCTGGATACTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47355698 12 + 51301725 CCTGGATACTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47065385 12 + 50890351 CCTGGATACTCA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e panTro4.chr19 4208005 1854 - 63644993 I a score=303732.000000 s hg38.chr19_GL949747v2_alt 333560 138 + 729520 CAGGGACATCTGT--GAATATCTGCTGCTGCCCCATCTGGCCCCGGTGAGGCTGCTCCTCCCTTTCACGTTGGGCCCCACTGCAGCCTCCTGGTGTTCA--------CCGCCAGGGCACACCCCAGGGGAACTGGGGTGGGATCATAA s panTro4.chr19 4209859 138 - 63644993 CAGGGACATTTGT--GAGTATCTGCTGCTGCCCCATCTGGCCCAAGTGAGGCCTCCCCTCCCCTCCATGTTGGGCCCCACTGCAGCCCCCTGATGTTCA--------CCCCCAGGACACTCCTCAGGGGAATTAGGGTGTGGTCATGA i panTro4.chr19 I 1854 C 0 s ponAbe2.chr19 56162643 138 + 60714840 CAGGGACATCTGT--GAGTATCTGCTGCTGCCCCATCTAGCCCAGGTGAAGCTGCTCCTCCCTTTCATGTTGGGCCCCACTGCAGCCTCCTGATGTTCA--------CCGCCAGGACACACCCCAGGGGAATTGGGGTGGGGTCATAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102908714 138 - 106955855 CAGGGACATCTGT--GAGTATCTAAGCCTGCTCCATCTGGCCCAGGTGAGGCTGCTCCTCCCTTTCACGCTGGGCCCCACTGCAGCCTCCTGGTGTTCA--------CCGCCAGGACACACCCCAGGGGAATTGGGGTGGGGTCATAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60165856 127 + 64156825 CAGGGATGTCTGT--GTGTATATGCTGCTGCCCCATCTGGCCCAGGTGAGGCCTGTCCCCCCTTCCACGTTGGGCCCCACTGCAGCCTCCTGGTGCT-------------------CACACCCCAGGGGAATTGGGGTGGGGTCACAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55264862 124 + 59248254 CAGGGATGTCTGT--GTGTATATGCTGCTGCCCCATCTGGCCCAGGTGAGGCCTGTCCCCCCTTCCACATTGGGCCCCACTGCAGCCTCCTGGTGCT-------------------CACACCCCAGGGGAATTGG---GGAATCACAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47355710 127 + 51301725 CAGGGATGTCTGT--ATGTATATGCTGCTGCCCCATCTGGCCCAGGTGAGGCCTGTCCTCCCTTCCACGTTgggcctcactgcagcctcctggtgCT-------------------CACACCCCAGGGGAATTGGGGTGGGGTCACAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47065397 114 + 50890351 CAGGGATATCTGG--GAGTATATGCTGTTGCCCCATCTGGCCCAGGTGAGGCCTGTCCTCCCTTCCACATTGGGCCTCAC-------------TGCT-------------------CACACCCCAGGGGAATTGGGGTGGGGTCACAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45573882 148 + 49145316 CAGGGGCGTCTGTGAGAGTATCTGCTGCTGCCCCACCTGGTCAAGGTGGTGTCTCTCCTCCCCTCCACACTGGACCCCACTGCAGACCCCTGGCATGCACCCCTCCCCCCCCAGGACTCATCTCAGGGGAATCGGGGCGAGGTCatga i calJac3.chr22 I 1966 I 11206 e canFam3.chr1 103003988 0 + 122678785 I a score=106458.000000 s hg38.chr19_GL949747v2_alt 333698 54 + 729520 GCACAGGGTAGGCCCTCCCTCTCTGCCTGGCCACACTGCACTGCCAGGTGAATT s panTro4.chr19 4209997 54 - 63644993 TCACAGGGTGAGCCTTCCCTCTCTGCCTGGCCACACTGCACCACCGGGTGTGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56162781 54 + 60714840 GCACAGGGTAGGCCCTCCCTCTCTGCCTGGCCACACTGCACTGCCAGGTGATTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102908852 54 - 106955855 GCACAGGGTAGGCCCTCCCTCTCTGCCTGGCCACACTGCACTGCCAGGTGAGTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60165983 43 + 64156825 GCACAGGGTAGGCCCTCCCTCTCTGCCTGGCCGCACTGCACTG----------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55264986 43 + 59248254 GCACAGGGTAGGCCCTCCCTCTCTGCCTGGCCGCACTGCACTG----------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47355837 43 + 51301725 GCACAGGGTAggccctccctctctgcctggcCACACTGCACTG----------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47065511 54 + 50890351 GCACAGGGTAGGCCCTCCCTCTCTGCCTGGCCACACTGCACTGCCAGGTGAGTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45574030 11206 + 49145316 I a score=211720.000000 s hg38.chr19_GL949747v2_alt 333752 130 + 729520 AAACATGGCTCTTCCCCCAGGTGGTGCTTGGGGGCCCGTGCAGCAGGAGGGACATCTTCTCCGCACAGCAATGTTCCCAGATCTCACCACCCTGAGTTCTGGCCCCTGCGTTGGGCGGGTTGGCAAGTCA s panTro4.chr19 4210051 127 - 63644993 AAACGTGGCTTCTCCTCCAGGTGG-GCTTGGGGG-CGGTGGAGCAGGAGGGACATCCTCTCCATACAGCAGTGTCCCCAGA-CCCATCGCGCTGAGTCCCAGCCCCTGCATTGGGCGGGTTGGAGGTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56162835 129 + 60714840 AAACATGGCTCCTCCCCCAGGTGGTGCTTGGGGGCCCGTGCAGCAGGAGGGACATCTTCTCCGCACAGCAATGTCCCCAGACCTCACTACGCTGAGTTCTGGCCCCTGCGTTGGGTGGGTTGGCAAGT-A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102908906 127 - 106955855 AAACATGGCTCCTCCCCCAGGTGGTGCTTGGGGGTCCATGCAGCAGGAGGGACA---TCTGTGCACAGCAATGTCCGCAGACCTCATCACCCTGAGTTCTGGCCCCTGCATTGGGCAGGCTGGCAAGTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166026 111 + 64156825 ---------------CCCAGGTGGTGCTTGGGGG-CCGTGCAGCACGAGGGACAT---CTCCACACAGCAATGTCCCCAGACCTCATCACCCTGAGTTCTGGCCCCAGCGTTGGGTGGGTTGGAAGGTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55265029 111 + 59248254 ---------------CCCAGGTGGTGCTTGGGGG-CCGTGCAGCACGAGGGACAT---CTCCACACAGCAATGTCCCCAGACCTCATCACCCTGAGTTCTGGCCCCAGCGTTGGGTGGGTTGGAAGGTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47355880 111 + 51301725 ---------------CCCAGGTGGTGCTTGGGGG-CCGTGCAGCAGGAGGGACAT---CGCCACACAGCAATGTCCCCAGACCTCATCACCCTGAGTTCTGGCCCCTGTGTTGGGTGGGTTGGAAggtga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3673610 127 - 50890351 AAACGTGGCTTCTCCTCCAGGTGG-GCTTGGGGA-CTGTGGAGCAGGAGGGACATCCCCTCCACACAGCAGTGTCCCCAGACC-CATCGCCCTGAGTCCCAACCCCTGCATTGCGCAGGTTGGAGGATCC i chlSab2.chr6 n 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45574030 11206 + 49145316 I a score=594611.000000 s hg38.chr19_GL949747v2_alt 333882 244 + 729520 AG-AGAAAAAACAAGCCCCTGCATCTAATTTTCTGTCTTCTCTCTGGGCCCTTCCTCTTTCCACTAATATGTCAAGAAACAACAGTGTGGTATTTTTGCTTAATTTCCCCTAAACTCTATCTGTCCTGCTTTCCACTGTGACCTCACCACCTGAACTTCCTGGACTTCCTTACACTGGAGCAGACACTGGCATCT-----GCTCAGCTCTCCTGTGCTCTGCAAGGGGTAGAAAAATTCACCCA---TCCTCT s panTro4.chr19 4210178 247 - 63644993 AGAAGAAAAGATGAGTCGCTGCCTCTGCTTTTCTGTCCTCTGCCTGGACCCATCCTCTTTCCACCAAT-CCCCAAAAAAGAACAGTTGGGTGCTTTTGTTTAATTTCCCCTAAACCACGTCTGTCCTGCTTTTCACTGAGGCCTGGCTGCCTGCACATCCTGGACTTCCTTACACTGGAGCAGGTACTGGGGCCT-----GCTCAGCCCTCCTGTGCTCTGCAAGGGGTAGAAAAATTCACACAGCCTCCTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56162964 243 + 60714840 AG-AGAAAAAACAAGACCCTGCATCTAATTTTCTGTCTTCTCTCTGGGACCTTCCTCTTTCCACTAATATGTCAACAAATAACAGTGTGGTATTTTTGCTTAATTTCCCCTAAACTCTATCTGTCCTGCTTTCCACTGTGG-CTCACCACCTGAACTTCCTAGACTTCCTTACACTGGAGCAGACACTGGCATCT-----GCTCAGCTCTCCTGTGCTCTGCAAGGGGTAGAAAAATTCACACA---CCCTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909033 242 - 106955855 AG-AGAAAAAACAAGCCCTTGCATCTAATTTTCTGTCTTCTCTCTGGGCCCTTCCTCTTTCCACTAATACATCAAGAAATA--AGTGTGGTATTTTTGCTTAATTTCCCCTAAACTATATCTGTCCTGCTTTCCACTGTGACCTCACTGCCTGAACTTTCTGGACTTCCTTACACTGGAGCAGACATGGGCATCT-----GCTCAGCTCTCCTGTGCTCTGCAAGGGACAGAAAAATTCACACA---TCCTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166137 250 + 64156825 AGAAGAAAAGACAGTCCCCTGCATCTGATTTTCTGTCTTCTCTCTGGACCCATCCTCCTCCCACTAATACTTCAAGAAATAACAGTGTGGTATTTTTGCTTAATTTCCCCTAAACTATATCTGTCCTGCTTTCCACTGTGACCTCACCGCCTGAACTTCCTAGACTTCCTTGCACTGGAGCAGACAATGGCCTCTGCTCAGCTCAGCTCTCCTGTGCTCTGCAAGGGGTAGAAAAATTCACACA---TCCTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55265140 250 + 59248254 AGAAGAAAAGACAGTCCCCTGCATCTGATTTTCTGTCTTCTCTCTGGACCCATCCTCCTCCCACTAATACTTCAAGAAATAATAGTGTGGTATTTTTGCTTAATTTCCCCTAAACTATATCTGTCCTGCTTTCCACTGTGACCTCACCGCCTGAACTTCCTAGACTTCCTTGCACTGGAGCAGACAATGGCAtctgctcagctcagctctcctgtgctctgcAAGGGGTAGAAAAATTCACACA---TCCTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47355991 249 + 51301725 agaagaaaagacagtcCCCTGCAtctgattttctgtcttctctctgggTCCATCCTCCTCCCACTAATACTTCAAGAAATAATAGTGTGGTATTTTTGCTTAATTTCCCCTAAACTATATCTGTCCTG-TTTCCACTGTGACCTCACCGCCTGAACTTCCTGGACTTCCTTGCACTGGAGCAGACAGTGGCATCTGCTCGGCTCAGCTCTCCTGTGCTCTGCAAGGGGTAGAAAAGTTCACACA---TCCTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3673737 244 - 50890351 AGAAGAAAAGATGAGTTGCTACCTCTGCTCTTCTCTCCTCTCCCTGGACCCCTCCTCTTTCCACCAAT-CCCCACACAAGAACAGTTGGGCGCTTTTGTTTAATTTCCCCTAAACCATGGCTGCCCTGCTTTTCACTGCGGCCTCACTGACTGGAATTCCTGCACTTCCTTACACCGGAACAGGTACTGG-----GGTCCGCTCAGCCCTCCTGTGCTCTGCAGGGGGTAGAAGAAGTCACACA---TCCTCT i chlSab2.chr6 C 0 I 193 s calJac3.chr22 45585236 232 + 49145316 -aaagaaagaaaTAGTCCCTGCATCTGATTTTCTGTCTTCTCTCTTGGCTCTTCCTCTTTCCACTATT------------AACAGTTCGGTGTTTTTGCTTCAATTCCCCTAAACTATATCTGTCCTGCTTTCCACTGTTACCTCACTGCCTGAACTTCCTGGACTTCCTTACACTGGAGCAGACGCTGGGACCT-----GCTCAGCCCTCCTGTGCTCTGCAAGGGGTAAAAGAATGCCCAAA---TCCTCT i calJac3.chr22 I 11206 C 0 e canFam3.chr1 103003988 0 + 122678785 I a score=295583.000000 s hg38.chr19_GL949747v2_alt 334126 137 + 729520 GCTATGTGCAGACTGTCCACCTTCTGCTATAGAGTTCATGTACCCACCTGTCAACCTCAT------AGTCAAA--CAAACAAGACGTTATGGGGGAAAACACCCGGCTGATGGTTGAAAAACAACC--AGAGAAGAAAGACAGAGAT s panTro4.chr19 4210425 144 - 63644993 GCTAAGGTCAAGCTG-CCACCCTTTGCTGAAGGCCTCATTTACCCACCTGTCCACCTCAGGGTCCAAGCCAAA--CAAACAAGACGTGATGGGAGAAGACACTGCGCTAATAGTTGAAAAACAACCAGAGAGAAGAAAGACAGAGAT i panTro4.chr19 C 0 I 27 s ponAbe2.chr19 56163207 137 + 60714840 GCTATGTCCAGACTGTCCACCTTCTGCTAAAGAGTTCATTTACCCACCTGTCAACCTCAG------AGTCAAA--AAAACAAGATGTTATGGGAGAAAACACCCGGCTGATGGTTGAAAAACAACC--AGAGAAGAAagacagagat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909275 137 - 106955855 GCTATGTCCAGACTGTCCACCTTCTGCTAAGGAGTTCATTTACCCACCCGTCAACCTCAG------AGTCAAA--CAAACAAGATGTTATGGGAGAAAACACCCGGCTGATGGTTGAAAAACAACc--agagaagaaagacagagat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166387 137 + 64156825 CCTATGTCCAGACTGTCCGCCTTCTGCTAAAGAGTTCATTTACCCACCTGTCAACCTCAG------AGTCAAA--CGAACAAGACGTTATGGGAGAAAACACCCGGCTGATGGTTGAAAAACAACC--AGAAAagaaagacagagat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55265390 137 + 59248254 CCTATGTCCAGACTGTCCACCTTCTGCTAAAGAGTTCATTTACCCACCTGTCAACCTCAG------AGTCAAA--CGAACAAGACGTTATGGCAGAAAACACCCGGCTGATGGTTGAAAAACAACC--AGAAAagaaagacagagat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47356240 137 + 51301725 CCTATGTCCAGACTGTCTGCCTTCTGCTAAAGAGTTCCTTTACCCACCTGTCAACCTCAG------AGTCAAA--CAAACAAGACGTTATGGGAGAAAACACCCAGCTGATGGTtgaaaaacaacc--agaaaagaaagacagagat i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45585468 139 + 49145316 GCTACGTCCAGACTGTTCACCTTTTGCTAAAGAGTTCATTTACCCACCTGTCACCCTCAG------AGTCAGAGTCAAAGAAGATGTTATGGGAGAAAACACTCCGCTGATGGTTGAAAAACAACC--agagaagaaagacagagat i calJac3.chr22 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e chlSab2.chr6 3673981 193 - 50890351 I a score=23613.000000 s hg38.chr19_GL949747v2_alt 334263 14 + 729520 -GTAGAAAAAGAGAC s ponAbe2.chr19 56163344 14 + 60714840 -gcagaaaaagagac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909412 14 - 106955855 -gcagaaaaagagac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166524 14 + 64156825 -acagaaaaagagac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55265527 14 + 59248254 -acagaaaaagagac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47356377 14 + 51301725 -acagaaaaagagac i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45585607 15 + 49145316 gccaaaaaaagagac i calJac3.chr22 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e chlSab2.chr6 3673981 193 - 50890351 I e panTro4.chr19 4210569 27 - 63644993 I a score=271135.000000 s hg38.chr19_GL949747v2_alt 334277 212 + 729520 AAAGACggctggacgcagtggctcacgcctgtaatcccaggactttgggaggctgaggtgggcagatcacctgaggtcgggagttcaaaaccagcctaagcaacatggagagccccccgtctctaacaaaaatacaaaaaattagccgtgtgtggtggtgcatgcctgtaatcccagctgctcaggaggctgaggcaggagaatcgcttgaa s ponAbe2.chr19 56163358 211 + 60714840 agagacggctgggcgcagtggctcacgcctgtaatcccaggactttgggaggccgaggtgggcggatcacctgaagtcgggagttcgagaccagtctgaccaacatggagaa-accccgtctctaacaaaaatacaaaaaattagctgggtatggtggtgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909426 211 - 106955855 agagacggctgggcgcagtggctcatgcctgtaatcccaggactttggggggctgaggcgggtggatcacctgaggttgggagttcgagaccagcctgaccaacatggagaa-accccgtctctaacaaaaatacaaaaaattagctgggtgtggtggtgcacgcctgtaatcccagctactcgggaggctgaagcaggagaatcgcttgaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166538 211 + 64156825 agagatggctgggcgcagtggctcacgcctgtaatcccaggactttgggaggccgaggtgggtggatcacctgaggttgcgagttcgagaccagcctgaccaacatgcagaa-atcccgtctctaacaaaaatacaaaaagttagctgggtgtggtggtgcatgcctgtaatcccagctactcgggaggctgaggcagcagaattgcttgaa i rheMac3.chr19 C 0 I 5 s macFas5.chr19 55265541 211 + 59248254 agagatggctgggcgcagtggctcacgcctgtaatcccaggactttgggaggccgaggtgggtggatcacctgaggttgggagttcgagaccagcctgaccaacatgcagaa-atcccgtctctaacaaaaatacaaaaaattagctgggtgtggtggtgcatgcctgtaatcccagctactcgggaggctgaggcagcagaattgcttgaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47356391 211 + 51301725 aaagatggctgggcgcagtggctcacgcctgtaatcccaggactttgggaggctgaggtgggtggatcacctgaggttgggagatcgagaccagcctcaccaacatgcagaa-atcccatctctaacaaaaatacaaaaagttagctgggtgtggtggtgcatgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaa i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45585622 0 + 49145316 C e chlSab2.chr6 3673981 193 - 50890351 I e panTro4.chr19 4210569 27 - 63644993 I a score=62645.000000 s hg38.chr19_GL949747v2_alt 334489 79 + 729520 cccgggaggcagaggttgcagtgagccaagattgcgccattgcactccagcctgggcaacaagagcgaaactccatctc s ponAbe2.chr19 56163569 79 + 60714840 cccaggaggtggaggttgcagtgagccaagattgcgccattgcactccagcctgggcaacatgagtgaaactccatctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909637 79 - 106955855 cccgggaggcagaagttgcagtgagccaagattgtgccgttgcactccagcctgggcaacaagagcgaaactccatctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55265752 79 + 59248254 cctgggaggcagaggttgtagtgagctgagatcgcaccattacactccagcctgggaaacgagagggaaactctgtctc i macFas5.chr19 C 0 I 10 s papAnu2.chr19 47356602 79 + 51301725 cctgggaggcagaggttgtagtgagccgagattgcaccattacactccagcctgggcaacaagagcgaaactctgtccc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45585622 0 + 49145316 C e chlSab2.chr6 3673981 193 - 50890351 I e rheMac3.chr19 60166749 5 + 64156825 I e panTro4.chr19 4210569 27 - 63644993 I a score=21120.000000 s hg38.chr19_GL949747v2_alt 334568 30 + 729520 -aaagaa--aaaaa---aaaGag--------------agagagagacaga s ponAbe2.chr19 56163648 32 + 60714840 -aaaaaaacaaaaa---aaaaaa--------------aaaaagagagaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909716 30 - 106955855 -aaaaaa--aaaaa---agagag--------------agagagagacaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166754 32 + 64156825 aaaaaag--agagac--agagag--------------agagagagacaga i rheMac3.chr19 I 5 C 0 s macFas5.chr19 55265841 34 + 59248254 aaaacag--agagacagagagag--------------agagagagacaga i macFas5.chr19 I 10 C 0 s papAnu2.chr19 47356681 48 + 51301725 aaaaaag--agagagagagagagagagagagagagacagagagagacaga i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45585622 0 + 49145316 C e chlSab2.chr6 3673981 193 - 50890351 I e panTro4.chr19 4210569 27 - 63644993 I a score=32538.000000 s hg38.chr19_GL949747v2_alt 334598 35 + 729520 gagacacacagtgagagagaaagacag--------------aaagagag s ponAbe2.chr19 56163680 31 + 60714840 gacacacacacacagagagaaagac------------------agagag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909746 33 - 106955855 g--acacacagtgagagagaaagacag--------------aaagagag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166786 47 + 64156825 g--acacattgtgagagagaaagaaagagagagagaaagaaagagagag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55265875 33 + 59248254 g--acacattgtgagagagaaagaaag--------------agagagag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47356729 33 + 51301725 g--acacattgtgagacagaaagacag--------------aaagagag i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45585622 33 + 49145316 g--agacacccagaaagagaaagacag--------------aaagagag i calJac3.chr22 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e chlSab2.chr6 3673981 193 - 50890351 I e panTro4.chr19 4210569 27 - 63644993 I a score=34037.000000 s hg38.chr19_GL949747v2_alt 334633 21 + 729520 acagggacagagacagacaga s panTro4.chr19 4210596 21 - 63644993 ACagagagagagagagagaga i panTro4.chr19 I 27 C 0 s ponAbe2.chr19 56163711 17 + 60714840 acagggacag----agacaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909779 21 - 106955855 acagggacagagatagacaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166833 21 + 64156825 acaaagacagagacagataga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55265908 21 + 59248254 acaaagacagagacagaTAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47356762 21 + 51301725 acaaggacagagacagataga i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45585655 21 + 49145316 aaagggacagagaTGCACAGA i calJac3.chr22 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e chlSab2.chr6 3673981 193 - 50890351 I a score=374220.000000 s hg38.chr19_GL949747v2_alt 334654 141 + 729520 gCAGGGAGAATGTGTCCCACGTGAAGAACAGGGAAAATCGGTCACAATGTTCACACAAGAAAGCAAAGATACAGAGTACAGCACTGGGAAGCAGATCCCAGGAGGAAATTAAACCTGAGCACAAATAGAAAATTAAAGCTC s panTro4.chr19 4210617 140 - 63644993 gcagggagaATGTGTCCCACATAAAGAACAGAGAAAATCAGTCATCATGT-AAGAGAAGAAGTCAAAAATAAAGAGCACAGGTCTAGGAAACAGATCCTGGAAGGAAATTAAACTTGAGCACAAATAGAAAATTAAAGCTC i panTro4.chr19 C 0 I 12032 s ponAbe2.chr19 56163728 141 + 60714840 gCAGGGAGAATGTGTCCCACGTGAAGAACAGGGAAAATCAGTCATGATGTTCACACAACAAAGCAAAAATACAGAGTACAGCACTGGGAAGCAGATCCCAGGAGGAAATTAAACCTGAGCGCAAATAGAAAGTTAAAGCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909800 141 - 106955855 gcagggaGAATGTGTCCCACGTGAAGAACAGGGAAAATCAGTCATGATGTTCACACAAGAAAGCAAAGATACAGAGTACAGCACTGGGAAGCAGATCCCAGGAGGAAATTAAACCTGAGCACAAATAGAAAATTAAAGCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166854 141 + 64156825 gcagggagaACGTGTCCCACGTGAAGAACAGGGAAAATCAGTCATGATATTCACGCAAGAAAGCAAAGATATAGAGTACAGCAATAGAAAGCAGATCACAGGAGGAAATTAAACCTGAGCACAAATAGAAAATTAAAGCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55265929 141 + 59248254 GCAGGGAGAACGTGTCCCACGTGAAGAACAGGGAAAATCAGTCATGATATTCACGCAAGAAAGCAAAGATATAGAGTACAGCAATAGAAAGCAGATCACAGGAGGAAATTAAACCTGAGCACAAAGAGAAAATTAAAGCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47356783 141 + 51301725 gcagggagaATGTGTCCCACGTGAAGAACAGGGAAAATCAGTCATGATATTCACGCAAGAAAGCAAAGATAGAGAGTACAGCAATAGAAAGCAGATCACAGGAGGAAATTAAACCTGagcacaaatagaaaattaaagctT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3674174 138 - 50890351 GCAAGGAGAATGTGTCCCACGTGAAGAACAGAGAAAATCAGTCATCATGT---AACAAGAAAGCAAAAATAAAGAGCACAGGTCTAGGAAACAGATCCTGGAAGGAAATTAAACTTGAGCACAAATAGGAAATTAAAACTC i chlSab2.chr6 I 193 C 0 s calJac3.chr22 45585676 139 + 49145316 GCAGGGA-AATGTGTCCCATGTGAAGAAGAGGAAAAATCAGTCAGGATGTTCACACAAGAAAGCAAAGATACAGAGTCCAGCATTGGG-AGTAGATCCCAGGAGGAAATGAGACCTGAGTGCAAATAGAAAACTAAATCTC i calJac3.chr22 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I a score=38983.000000 s hg38.chr19_GL949747v2_alt 334795 16 + 729520 AGTACAAATTAAAATT s ponAbe2.chr19 56163869 16 + 60714840 AGTACAAATTAAAATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909941 16 - 106955855 AGTACAAATTAAAATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166995 16 + 64156825 AGTACAAATTAAAATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55266070 16 + 59248254 AGTACAAATTAAAATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47356924 16 + 51301725 AGTACAAATTAAAATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3674312 16 - 50890351 AGTACAAATTAAAATT i chlSab2.chr6 C 0 I 15160 s calJac3.chr22 45585815 16 + 49145316 AGTGCCAATTAAAATT i calJac3.chr22 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e panTro4.chr19 4210757 12032 - 63644993 I a score=535109.000000 s hg38.chr19_GL949747v2_alt 334811 326 + 729520 GGGTAGGCCAGTCAGGTA-CCACCCTCTTTGAACCAGCACAGAAACCTCCCAGCAGACCGAGCTGCAGCCCATCCCGGggttcataatgtggagtcaggagcctcaggtgggtctgaagcccctgtctctgagacttggccgaccttggacaggttacttcatgtctcggtccatagt-----------ttctgtttttataaatgaggaaaata--atagagcacgctgtggagggtttgtaggagaatttaatgtgtccac-gtttgcctagaactaaattagcaactgccccatagaaagagctGGCTGAGTTTTTGCTGAATTCTTAAAAATCtttc s ponAbe2.chr19 56163885 326 + 60714840 GGGTAGGCCAGCCAGGCACCCACCTTCTTTGAACCAGGACAGAAACCTCCCAGCAGACCAAGCTGCAGCCCATTCCGGggttcataatgtggagtcaggagcctcacgtgagtctgaagcccctgtctctgagac--ggccgaccttggacaggttacttcatgtctcggtccatagt-----------ttctgttcttacaaatgaggaaaata--atagagcacgctgtggagggtttgcaggaaaatgtaacgtgtccatggtttgcctagaactaaattagcaactgtcccatagaaagagctGGCTGAGTTTTTGCTGAATTCTTAAAAATCtttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909957 326 - 106955855 GGGTAGGCCAGCCAGGAATCCACCCTCTTTGAACCAGGACAGAAACCTCCCAGCAGACCGAGCTGCAGCCCA-ACCGGggttcatgatgtggagtcaggagcctcccccgggtctgaagcccatgtctctgagacttggccgaccttggacaggttacttcatgtctcggtccatagt-----------ttctgtttttagaaatgaggaaaata--atagagcacgctgtggagggtttgtaggagaatttaatgtgtccat-gtttgcctagaactaaattagcaactgccccatagaaagagctgactgagttttTGCTGAGTTCTTAAAAATCtttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60167011 329 + 64156825 GGGTAGGCCAGCCAGGCACCCACCCTCTTTGAACCAGGACAGAAACCTCCCAGCAGACTGAGCTGCAGTCCGTCCTGGggttcataatatggaatcaggagcctcacccgggtctgaagcccctgcctctgagacttggccgaccttggaccagttacttcatgtctcggtccatagttt---------ttttttttttttaaatgaggaaaata--atagagcacgctgtgaagggtttgtaggataatttaatgcgtccat-gtttgcttacaactaaattagcaactgccccatagaaaaagctGGCTGAGTTTTTGCTGAATTCTTAAAAATCTTTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55266086 331 + 59248254 GGGTAGGCCAGCCAGGCACCCACCCTCTTTGAACAAGGACAGAAACCTCCCAGCAGACTGAGCTGCAGTCCGTCCTGGggttcataatatggaatcaggagcctcacccgggtctgaagcccctgcctctgagacttggccgaccttggacaggttacttcatgtcttggtccatagttt-------tgtttttttttttttaatgaggaaaata--atagagcatgctgtgaagggtttgtaggagaatttaatgtgtccat-gtttgcttacaactaaattagcaactgccccacagaaagagctGGCTGAGTTTTTGCTGAATTCTTAAAAATCTTTC i macFas5.chr19 C 0 I 2302 s papAnu2.chr19 47356940 329 + 51301725 GGGTAGGCCAGCCAGGCACCCACCCTCTTTGAACCAGGACAGAAATCTCCCAGCAGACTGAGCTGCAGTCCGTCCCGGGGTTCATAATATGGAATCAGGAGCCTCACCCGGATCTGAAGTCCCTGTCTCTGAGACTTGGCTGACCTTGGACAGGTTACTTCATGTCTTGGTCcatagttg---------tgtttttttttttaatgaggaaaata--atagagCACGCTGTGAAGGGTTTGTAGGAGAATTTAATGTGTCCAT-GTTTGCTTACAACTAAATTAGCAACTGCCCCATAGAAAGAGCTGGCTGAGTTTTTGCTGAATTCTtaaaaatctttc i papAnu2.chr19 C 0 I 1622 s calJac3.chr22 45585831 337 + 49145316 GGGAAGGCCAGCCAGGCACCCACCTTCTTTGAACCGGGACAGAAACCTTCCAGCACGGTGAGCTGCAGCCTGTCCaggggttcataacgtggagtcgggagcctcatgaggatctgaagcccccgcctctgagacatggctgatcttgaacaagttacttcgtgtcttggtccatagtttttttttttttctctttttttttaatgaggaaaataatatagggcacgctgtggagtgtttgtaggagaatttaatatgtcaat-gtttgcctagaactaaattagcaactgccccatagaaagagctggctgaatttttgctgaa---ttaAAAATCTTTC i calJac3.chr22 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e chlSab2.chr6 3674328 15160 - 50890351 I e panTro4.chr19 4210757 12032 - 63644993 I a score=1911.000000 s hg38.chr19_GL949747v2_alt 335137 1 + 729520 t s ponAbe2.chr19 56164211 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102910283 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60167340 1 + 64156825 T i rheMac3.chr19 C 0 I 1726 s macFas5.chr19 55268719 1 + 59248254 t i macFas5.chr19 I 2302 C 0 s papAnu2.chr19 47358891 1 + 51301725 t i papAnu2.chr19 I 1622 C 0 s calJac3.chr22 45586168 1 + 49145316 T i calJac3.chr22 C 0 I 985 e canFam3.chr1 103003988 0 + 122678785 I e chlSab2.chr6 3674328 15160 - 50890351 I e panTro4.chr19 4210757 12032 - 63644993 I a score=14592.000000 s hg38.chr19_GL949747v2_alt 335138 31 + 729520 tttcttttctttttttttttgacggagtctc s ponAbe2.chr19 56164212 25 + 60714840 tttc------ttttttttttgacggagtctc i ponAbe2.chr19 C 0 I 982 s nomLeu3.chr10 102910284 29 - 106955855 tttctttc--ttttgtttttgacggagtctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55268720 31 + 59248254 tttgttttcttttgttttgagacagagtctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47358892 31 + 51301725 tttgttttgttctgttttgagacagagtctc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45586169 985 + 49145316 I e chlSab2.chr6 3674328 15160 - 50890351 I e rheMac3.chr19 60167341 1726 + 64156825 I e panTro4.chr19 4210757 12032 - 63644993 I a score=111388.000000 s hg38.chr19_GL949747v2_alt 335169 140 + 729520 gctctgtcgcccaggctggagtgcagtggcaccacctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctc-ccgagtagctgggactacaggtgcccgccaccacgcccagctaatttt s ponAbe2.chr19 56165219 140 + 60714840 gctctgtcgcccgggctggagtgcagcagcgcgatctcggctcactgcaagctccgcctcccgggttcctgccattctcctgcctcagcctc-ccgagtagctgggactacaggcgcccgccaccgcgcccggctaatttt i ponAbe2.chr19 I 982 C 0 s nomLeu3.chr10 102910313 141 - 106955855 gctctttcacccaggctggagtgcagtggtgtgatctcagctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctctccgagtagctgggaccacaggcgcccgccaccatgcccggctaatttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55268751 140 + 59248254 actctgtcgcccaggctggagtgcagtggcgtgatttcggctcactgcaagctctccctcccgggttcacgctcttctcctgcctcagcctc-ccgagtaactgggactacaggcgcccgccaccactcccggctaatgtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47358923 140 + 51301725 actctgtcgcccaggctggagtgcagtggcatgatttcggctcactgcaagctatccctcccgggttcacgctcttctcctgcctcagcctc-ccgagtaactgggactacaggcgtccgccagcactcccggctagtgtt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45586169 985 + 49145316 I e chlSab2.chr6 3674328 15160 - 50890351 I e rheMac3.chr19 60167341 1726 + 64156825 I e panTro4.chr19 4210757 12032 - 63644993 I a score=430.000000 s hg38.chr19_GL949747v2_alt 335309 3 + 729520 -ttt s ponAbe2.chr19 56165359 2 + 60714840 -tt- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102910454 2 - 106955855 -tt- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60169067 3 + 64156825 ttt- i rheMac3.chr19 I 1726 C 0 s macFas5.chr19 55268891 2 + 59248254 -tt- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47359063 2 + 51301725 -tt- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45586169 985 + 49145316 I e chlSab2.chr6 3674328 15160 - 50890351 I e panTro4.chr19 4210757 12032 - 63644993 I a score=298541.000000 s hg38.chr19_GL949747v2_alt 335312 162 + 729520 gtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccTGTTTTTGTTTTTTAAAGACAAACACAGATTAACCC s panTro4.chr19 59282818 162 + 63644993 gtatttttagtagagacggggtttcaccgtgttagccaggatggtcttgatctcccgacctcgtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccaccgtgcccggccTGTTTTTGTTTTTTAAAGACAAACACAGATTAACCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56165361 162 + 60714840 gtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccacccacctcagcttcccaaagtgctgggattacaggcgtgagccaccgcgcccggccTGTTTTTGTTTTTTAAAGACAAACACAGATTAACCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102910456 158 - 106955855 gtatttttagtagagacggggtttcaccgcgttagccaggatggtctcgatctcctgacctcgtgatccgcccacctcagcctcccaaagtactgggattacaggtgtgagccactgcgcctggccTGTTTTTGTTTTTTAAAG----ACACAGATTAACCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60169070 162 + 64156825 gtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatccgccctcctcagcctcccagagtgctgggattacaggcgtgagccaccgcgcctggccTGCTTTTGTTTTTTAAAGACAAATACAGATGAACCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55268893 162 + 59248254 gtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatccgcccgcctcagcctcccagagtgctgggattacaggcgtgagccaccgcgcctggccTGCTTTTGTTTTTTAAAGACAAACACAGATTAACTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47359065 162 + 51301725 gtatttttagtagagacggggtttcaccatgttagccaggatggtctcaatctcctgacctcgtgatccgcccgcctcagcctcccagagtgctgggattacaggcgtgagccaccgcgcctggcctgcttttgttttttaaagacaaacaCAGATGAACCC i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45586169 985 + 49145316 I e chlSab2.chr6 3674328 15160 - 50890351 I a score=132395.000000 s hg38.chr19_GL949747v2_alt 335474 63 + 729520 AAATGAGATTCTGCCGCCTCCTAGTGGTACATAGGGTAATTTTCTGTGTCAATCAGTA-------------CATCT s panTro4.chr19 59282980 63 + 63644993 AAATGAGATTCTGCCTCCTCCTAGTGGTACACAGGGTAATTTTCTGTGTCAATCAGTA-------------CATCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56165523 63 + 60714840 AAATGAGATTCTGCTGCCTCCTAGTGGTGCATACGGTAATTTTCTGTGTCAATCAGTA-------------CATCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102910614 63 - 106955855 AAATGAGATTCTGTCGCCTCCTAGTGGTGCATAGGGTAATTTTCTATGTCAATCAGTA-------------CACCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60169232 76 + 64156825 AAATGAGATTCTGTCACCTCCTAGTGCTGCATAGGGTAATTTTCTGTTTCAATCTGCATTTGGGAGAGTACCGTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55269055 76 + 59248254 AAATTAGATTCTGTCACCTCCTAGTGCTGCATAGGGTAATTTTCTGTTTCAATCTGCATTTGGGAGAGTACCGTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47359227 76 + 51301725 AAATGAGATTCTGTCACCTCCTAGTGCTGCATAGGgtaattttctgtttcaatctGCGTTTGAGAGAGTACCGTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47065565 76 + 50890351 AAATGAGATTCTGTCACCTCCTAGTGCTGCATAGGGTAATTTTCTGTTTCAGTCTGCATTTGGGAGAGTACCATCT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45586169 985 + 49145316 I a score=755279.000000 s hg38.chr19_GL949747v2_alt 335537 268 + 729520 GACCCTACAGGTAGGGTGGATACTCAGAAATGCCTCAACCAACAGCAGGCTCAGTGATTCCTTGGATTTCCTGGGGCgtgtgagtgtatgtgcatgtctgtgtgtgtg----------cgtgtgtgtatgcatgtgtgtgAGAGCATGCATTCCTGTGCATGTATGTGCAGATGTGGACCTGTAGGGTCGGCTCTCTGCCTTCACCCAGCCACACCTCCCTCATTCATTCCTGATACACGTGATTTGTCAGAAAACACTGACACCAATGTGAAGTCCT s panTro4.chr19 59283043 268 + 63644993 GACCCTACAGGTAGGGTGGATACTCAGAAATGCCTCAACCAACAGCAGGCTCAGTGATTCCTTGGATTTCCTGGGGCAtgtgagtgtatgtgcatgtctgtgtgtgtg----------cgtgtgtgtatgcatgtgtgtgAGAGCATGCATGCCTGTGCATGTATGTGCAGATGTGGACCTGTAGGGTCGGCTCTCTGCCTTCACCCAGCCACACCTCCCTCATTCATTCCTGATACACGTGATTTGTCAGAAAACACTGACACCAATGTGAAGTCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56165586 277 + 60714840 GA-CCTACAGGTAGGGAGGATACTCGGATATGCCTCAACCAACAGCAGGCTCAGTGATTCCTTGGATTTCCTGGGGCgtgtgagtgtgtgtgcatgtctgtgtgtgtgtgtgtgtgtttgtgtgtgtatgcatgtgtgtgAGAGCATGCATTCTTGTGCATGTATGTGCAGATGTGGACCTGTAGGGTCAGCTCTCTGCCTTCACCCAGCCACACCTCCCTCATTCATTCCTGGTACACTTGATTTGTCAGAAAACACTGACACCAATGTGAAGTCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102910677 247 - 106955855 GACCGTACAGGTAGGGTGGATACTCGTATATGCCTCAACCAACAGCAGTCTCAGTGATTCCTTGGATTTCCTGGGGCgtgtgagtgtg------------------------------tgtgtgtgtatgcatgtgtgtgACAGCATGCATTCCTGTGCATGTATGTGCAGATGTGGACCTGTAGGGTCAGCTCTCTGCCTTCACCCAGCCACACCTACCTCATTCATTCCTGACACACGTGA-TTGTCAGAAAACACTGACAGCAATGTGAAGTCCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60169308 260 + 64156825 GACCCTACAGGTAGGGTGGATACTCAGATATGCCTCAACCAACAGCAGGCTCAGTGATTCCTTGGATTCCCTGAGGCgtgtgagtgtgtgtgcatgtctg------------------tgtgtgtgtacgcatgtgtgtgAGAGCATGCATTCCTGTGCATGTACGCGCAGATGTGGACCTGTAGGGTCAGCTCTCTGCCTTCACCCAGCCACACCTCCCTCATTCATTCCTGATACACGTGATTTGTCAGAAAACAGTGACACCAACGGGAAGTCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55269131 260 + 59248254 GACCCTACAGGTAGGGTGGATACTCAGATATGCCTCAACCAACAGCAGGCTCAGTGATTCCTTGGATTCCCTGAGGCgtgtgagtgtgtgtgcatgtctg------------------tgtgtgtgtacgcatgtgtgtgAGAGCATGCATTCCTGTGCATGTATGCGCAGATGTGGACCTGTAGGGTCAGCTCTCTGCCTTCACCCAGCCACACCTCCCTCATTCATTCCTGATACACGTGATTTGTCAGAAAACAGTGACACCAACGGGAAGTCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47359303 260 + 51301725 GACCCTACAGGTAGGGTGGATACTCAGATATGCCTCAACCAACAGCAGGCTCAGTGATTCCTTGGATTCCCTGaggcgtgtgagtgtgtgtgcatgtctg------------------tgtgtgtgtacgcatgtgtgtgAGAGCATGCCTTCCTGTGCATGTATGCGCAGATGTGGACCTGTAGGGTCAGCTGTCTGCCTTCACCCAGCCACACCTCCCTCATTCATTCCTGATACACGTGATTTGTCAGAAAACACTGACACCAATGGGAAGTCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47065641 259 + 50890351 GACCCTACAGGTAGGGTGGATACTCAGATATGCCTCAACCAACAGCAGGCTCAGTGATTCCTTGGATTCCCTGAGGCgtgtgagtgtgtgtgcatgtctg------------------tgtgtgtgtacgcatgtgtgtgAGAGCATGCCTTCCTGTGCATGTATGTGCAGATGTGGACCTGTAGGGTCAGCTCTCTGCCTTCACCCAGCCACACCT-CCTCATTCATTCCTGATACACGTGATTTGTCAGAAAACAGTGACACCAACGGGAAGTCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45587154 254 + 49145316 GACCCTACAGGTAGGGTGGATACTCGGATATGCCTCAACCAA-AGCAGGCTCAATGATTTCTTGG-TTTCCTG-GGCATGGGAGTGTGTGCACATCTCTC------------------CGCGTGTGTATGCATGTGTGTGAGAGCATGCATTCCTGTGCATGTATGTGCAGGTGTGAACTGGCAGGGTCAGCTCTCTGCCTTCACCCAGCTGAACCTCCTTCATTCATTCCTGATACACGTGCTTTGTCAGAAAACACTGACAACA---TGAAGTTTT i calJac3.chr22 I 985 I 567 e canFam3.chr1 103003988 0 + 122678785 I a score=135907.000000 s hg38.chr19_GL949747v2_alt 335805 63 + 729520 AAGATGAGCAAGTTCAGAATATCTAATGTATCGTATTCGTggtgatgggtgcgctgaggaat-t s panTro4.chr19 59283311 63 + 63644993 AAGATGAGCGAGTTCAGAATATCTAATGTATCGTATCCGTggtgatgggtgcactgaggaat-t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56165863 62 + 60714840 AAGATGAGCAAGTTCAGAATATCTAATGTATCGTATCCGTggtgatgggtgcgctgaggaat-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102910924 64 - 106955855 AAGATGAGCAAGTTCAGAATATCTAATGTATCGTATCCATggggatgggtgcgctgatgaatct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60169568 64 + 64156825 AAGATGAGCAAATTCAGAATATCTaatgtataatatccgtggtagtgggtgcgctgatgaaact i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55269391 64 + 59248254 AAGATGAGCAAATTCAGAATATCTAATGTATAAtatccgtggtagtgggtgcgctgatgaaatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47359563 64 + 51301725 AAGATGAGCAAATTCAGAATATCTAATGTATAATATCCGTGGTAGTGGGTGCGCTGATGAATGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47065900 64 + 50890351 AAGATGAGCAAATTCAGAATATCTaatgtataatatccgtggtagtgggtgcgctgatgaatgt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45587408 567 + 49145316 I a score=213120.000000 s hg38.chr19_GL949747v2_alt 335868 71 + 729520 gattgtgactgtcattgca----caatgtacgtgtacgacaaattatcacattttacaccttgaatacgtacaat s panTro4.chr19 59283374 71 + 63644993 gattgtgactatcatcgca----caatgtatgtgtatgacaaattatcacattttatgccttgaatatgtacaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56165925 69 + 60714840 --ttgtggctatcattgca----caatgtatgcgtataacaaattattacattttacgccttgaatatgtacaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102910988 71 - 106955855 gattgtgactatcactgca----caatgtatgcgtgtaacaaattatcacattttacgccttgaatatgtacaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60169632 71 + 64156825 gattgtggctatcattgca----caatgtatgcgtataacaaattatcacattttacgccttgaatatgtacaat i rheMac3.chr19 C 0 I 310 s macFas5.chr19 55269455 71 + 59248254 gattgtggctatcattgca----caatgtatgcgtataacaaattatcacattttacgccttgaatatgtacaat i macFas5.chr19 C 0 I 314 s papAnu2.chr19 47359627 75 + 51301725 GATTGTGGCTATCATTGCACAATCAATGTATGCGTATAACGAATTATCACATTTTACGCCTTGAATATGTACAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47065964 71 + 50890351 gattgtggctatcattgca----caatgtatgcgtatgacgaattatcacattttacgccttgaatatgtacaat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45587975 71 + 49145316 gattgtggttatcattgca----caatgtatgcgtataacaaattatcacattttacgccttgaatatgtaccat i calJac3.chr22 I 567 C 0 e canFam3.chr1 103003988 0 + 122678785 I a score=66221.000000 s hg38.chr19_GL949747v2_alt 335939 22 + 729520 cctgatcaattaaattttaaaa s panTro4.chr19 59283445 22 + 63644993 cctgatcaattaaattttaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56165994 22 + 60714840 cctgatcaattaaattttaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102911059 22 - 106955855 cctggtcaattaaattttaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60170013 22 + 64156825 ccTGATCAATTAAATTTTAAAA i rheMac3.chr19 I 310 C 0 s macFas5.chr19 55269840 22 + 59248254 cctgatcaattaaattttaaaa i macFas5.chr19 I 314 C 0 s papAnu2.chr19 47359702 22 + 51301725 CCTgatagattaaattttaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47066035 22 + 50890351 cctgatcgattaaattttaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45588046 22 + 49145316 cttgatcaattaaatttaaaaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I a score=788476.000000 s hg38.chr19_GL949747v2_alt 335961 250 + 729520 agAAAACG--------CTGACACGTTTTC-GTAGGTCctgtttccctcactcagctttgaacaactgtgaaggcagagagtgggtccgagagacctatgcacccagg-accaggcctggggctgccagatgtgaggccttcaaaattatttattgaTGCGTGGAGTAAAGCACAACCCAGAGAACTG-GGCTTGGCTCTCAGCTGTGTGTGTATAGCACAGTCTCAAGGCTAGCTCTTGACTTCTAGGAAGGTCTTTAGGG s panTro4.chr19 59283467 251 + 63644993 agAAAACG--------CTGACACCTTTTttataagtcctgtttccctcactcagctttgaacaactgtgaaggcagagagtgggtccgagagacctatgcacccagg-accaggcctggggctgccagatgtgaggccttcaaaattatttattgatgcatggaGTAAAGCATAACCCAGAGAACTG-GGCTTGGCTCTCAGCTGTGTGTGTATAGCACAGTCTCAAGGCTAGCTCTTGACTTCTAGGAAGGTCTTTAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56166016 251 + 60714840 agAAAACG--------CTGACACCTCTTTTGTAGGTCctgcttccctcactcagctttgaacaactgtgaaggcagagactgggtccgagagacctatgtacccagg-accaggcctggggctgccagatgtgaggccttcaaaattatttattgaTGCACGGAGTAAAGCATAACCCAGAGAACTG-GGCTTGGCTCTCAGCTGTGTGTGTATAGCACAGTCTCAAGGCTAGCTCTTGACTTCTAGGAAGGTCTTTAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102911081 251 - 106955855 agAAAACG--------CTGACACCTCTTttgtaggtcgtgtttccctcactcagctttgaacaactgtgaaggcagagagtgggtctgagagacctatgcacccagg-accaggcctggggctgccagatgcgaggccttcaaaattatttattggtgcatggaGTAAAGCATAACCCAGAGAACTG-GGCTTGGCTCTCAGCTGTGTGTGTATAGCGCAGTCTCAAAGCTAGCTCTTGACTTCTAGGAAGGTCTTTAGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60170035 251 + 64156825 AGAAAACG--------CTGACACCTCCTTTGTAGGTCctgtttcccacactcagctttgaacaactgtgaaggcagagcctgggtccgagagacctatgcacccagg-accaggcctgaggttgccagatgtgaggtattcaaaattatttattgaTGCACAGAGTAAAGCATGATCCAGAGAACGG-GGCTTGGCTCTCAGCTGTGTGTGTATAGTGCAGTCTCAAGGATAACTCTTGACTTCTAGGAAGGTCTTTAAGG i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55269862 251 + 59248254 aGAAAACG--------CTGACACCTCCTTTGTAAGTCCTGTTTCCCACACTCAGCTTTGAACAACTGTGAAGGCAGAGCCTGGGTCCGAGAGACCTATGCACCCAGG-ACCAGGCCTGAGGTTGCCAGATGTGAGGTATTCAAAATTATTTATTGATGCACAGAGTAAAGCATGATCCAGAGAACTG-GGCTTGGCTCTCAGCTGTGTGTGTATAGTGCAGTCTCAAGCATAACTCTTGACTTCTAGGAAGGTCTTTAAGG i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47359724 251 + 51301725 agaaaacg--------cTGACACCTCCTTTGTAGGTTCTGTTTCCCACACTCAGCTTTGAACAACTGTGAAGGCAGAGCCTGGGTCCGAGAGACCTATGCACCCAGG-ACCAGGCCTGAGGTTGCCAGATGTGAggtattcaaaattatttattgatgcACAGAGTAAAGCATGATCCAGAGAACTG-GGCTTGGCTCTCAGCTGTGTGTGTATAGTGCAGTCTCAAGGATAACTCTTGACTTCTAGGAAGGTCTTTAAGG i papAnu2.chr19 C 0 M 398 s chlSab2.chr6 47066057 251 + 50890351 agaaaaCG--------CTGACACCTCCTTTGTAGGTCCTGTTTCCCACACTCAGCTTTGAACAACTGTGACGGCAGAGCCTGGGTCCGAGAGACCTATGCACCCAGG-ACCAGGCCTGAGGTTGCCAGATGTGAGGTATTCAGAATTATTTATTGATGCACAGAGTAAAGCATGATCCAGAGAACTG-GGCGTGGCTCTCAGCTGTGTGTGTATAGTGCAGTCTCAAGGCTAGCTCTTGACTTCTAGGAAGGTCTTTAGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45588068 258 + 49145316 agAAAATGCTTTTTTTCTGACACCTCCTTTGTAGGTtctgtttcctttactcagctctgaacaactgtgaaggcagaggctgggtccaggagacctgtgcacccagg-accaggaacggggctgccagatgtgaggtcttcaaaataatttattgaTGC-CAGAGGAGAGCGTGATGCAGAGAATCG-GGCATAGCTGCCAGCTGTGTGTGTATAGCGCAGTCTCAAGGTTATCACTTGACTTCTGGGAAGGTTTTTGGGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19756805 237 - 122678785 AGAAAACA--------CTGATGCATTCTTT----GTCTTGTTTTCTGCTCAAAACTCTGA------------GCAGAGACTGGGACCGAGTTACCTGTGTACTCTGGTTCCTTGCACAGGACTGCTGCAGAGTGGGCCTGTGAAAACTTTTATTGATGAACAAAGAGAAGCATAGTGCAGGAAACAGTGTCTCAGATATTAGCTGCGCAAGTATAGTCCCAGTTCAAGATCAACTAACCAAACTCTGGAAAGTCTTTAGAG i canFam3.chr1 I 10348 C 0 a score=616877.000000 s hg38.chr19_GL949747v2_alt 336211 213 + 729520 TCAGCAGGGCAGATAATTACAGCAAAGTCTCTGGGGTCA-CTGGAGGTTCACAGCAGACACCTAGGACAAGCTTGGAGGTGGCATCACTGCTCAGGAAATCGGCTGAT--------------------------------TGG-----------------------------------------------------------------------------------------------CTGTAGCTGGGCCTTT-AGAACAGGCAGGTGACTT--------------------------------TAGCTGGGTCTCTGGAAACAGTCAGGTGAATAAAGCTGGGTCTCTAGAAACAGCCAGGGAACTGTAGCT s panTro4.chr19 59283718 340 + 63644993 TCAGCAGGGCAGATAATTACAGCAAAGTCTCTGGGGTCA-CTGGAGGTTCACAGCAGACACCTAGGACAAGCTTGGAAGTGGCATCACTGCTCAGGAAATCGGCTGATTGGCTATAGCTGGGTCTCTGGAAATAGCCTCATGGCTGTAGCTGGGTCTCTAGAATAGGCAGGTGACTTTAGCTGGGTCTCTGGAAACAGTCAGGTGAATAAAGCTGGGTCTCTAGAAACAGCCAGGGAACTGTAGCTGGGTCTCT-AGAATAGGCAGGTGACTT--------------------------------TAGCTGGGTCTCTGGAAACAGTCAGGTGAATAAAGCTGGGTCTCTAGAAACAGCCAGGGAACTGTAGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56166267 213 + 60714840 TCAGCAGGGCAGATAATTACAGCAAAGTATCTGGGATCA-CTGGAGGTTCACAGCAGACACCTAAGACAAGCTTGGAGGTGGCATCACTGCTCAGGAAATCGGCTGAT--------------------------------TGG-----------------------------------------------------------------------------------------------CTGTAGCTGGGTCTCT-AGAACAGGCAGGTGACTT--------------------------------TAGCTGGGTCTCTGGAAACAGTCAGGTGAATAAAGCTGGGTCTCTAGAAACAGCCAGGGAACTGTAGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102911332 213 - 106955855 TCTGCAGGGCAGATAATTACAGCAAAGTCTCTGAGGTCA-CTGGAGGTTCACAGCAGACACCTGGGACAAGCTTGGAGGTGGCATCACTGCTCAGGAAATCTGCTGAT--------------------------------TGG-----------------------------------------------------------------------------------------------CTGTAGCTGGGCCTCT-AGAACAGGAGGGTGACTA--------------------------------TAGCTGGGTCTCTGGAAACAGTCAGGTGAATAAAGCTGGGTCTCTAGAAACAGCCAGGGAACTGTAGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60170287 245 + 64156825 TCAACAAGGCAGATAATTACAGCAAAGTCTCTGGGGTCA-TTGGAGGTTCACAGCAGACACCTAGGACAAGCTTGGAGGCGGCATCACTGCTCAGGAAATCAGCTGATTGGCTGTAGCAGGGTCTCTGGAAATAGCCTGACGG-----------------------------------------------------------------------------------------------CTGTAGCTGGGCCTCT-AGAACAGGCAGGTGACTT--------------------------------CAGCTGGGTCTCTGGAAACAGTCAGGTAAATAAAGCTGGGTCTCTAGAAACAGCCAGGGAACTGTAGCT i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55270114 245 + 59248254 TCAACAAGGCAGATAATTACAGCAAAGTCTCTGGGGTCA-TTGGAGGTTCACAGCAGACACCTAGGACAAGCTTGGAGGCGGCATCACTGCTCAGGAAATCAGCTGATTGGCTGTAGCAGGGTCTCTGGAAATAGCCTGACGG-----------------------------------------------------------------------------------------------CTGTAGCTGGGCCTCT-AGAACAGGCAGGTGACTT--------------------------------CAGCTGGGTCTCTGGAAACAGTCAGGTAAATAAAGCTGGGTCTCTAGAAACAGCCAGGGAACTGTAGCT i macFas5.chr19 I 1 C 0 s papAnu2.chr19 3778054 239 - 51301725 TCAGAAGAGCAGATCATTCCAACAAAGTCTCTGGGGTCA-TTGGAGATTCACAGGAGACACCTAGGACCAGCTGGGGGACTGCATCACTGCTCATCAGATCTGCTGGGTGTTTGTAGCCGGGTCTCTGGAGACAAC------------------------------------------------------------------------------------------------------CTGTGGCTGGGTTTCTGAAAATAGCCAGGTGACTA--------------------------------TAGTTGGATCTCTGAAAACAGTCAGGTGAATAAAGCTGGGGCTCTAGAAACAGCCAGACAACTGCAGCT i papAnu2.chr19 n 0 I 9021 s chlSab2.chr6 47066308 241 + 50890351 TTAACAGGGCAGATAATTATAGCAAAGTCTCTGGGGTCA-TTGGAGGTTCACAGCAGACACCTAGGACAAGCTTGGAGGTGGCATCACTGCTCAGGAAATCAGCTGATTGGCTGTAGCGGGGTCTCTGGAAATAGCCTGACGG-----------------------------------------------------------------------------------------------CTGTAGCTGGGCCTCT-AGAACAGGCAGGTGACTT--------------------------------CAACTGGGTCTCTGGAAA----CAGGTGAATAAAGCTGGGTCTCTAGAAACAGCCAGGGAACTGTAGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45588326 276 + 49145316 TCAGCAGGGAAGATAATTA-AGCAAAGTCTCTGGGGTCA-CTGGAGGTTCACCGGAGACACCTGGGACCAGTTTGGGGTCTGCATCACTACTCAGGAAATCAGCTGACTGGAGGTAGCTGGGTCTCTGGAAATAGCCTGATGG-----------------------------------------------------------------------------------------------CTGTAGCTGGGCCTCT-AGAAAAGGCAGGTGACTTTAGCTGGGTCTCTAGAAACAGCCAGGTAACTGTAGCTGGGTCTCTGGAAACAGTCAGGTGAGTAAAGCTGGGTCTCTAGAAACAGCCAGGTAACTGTACCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19757042 159 - 122678785 CCAGCTGAGTGGAAAATTAAAACGGAGCCTCTAGGGGCAGTTGGGGATACACAGGACACAACTGGAATCATCTGTGGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCA------------AGACCA--------------------------------------------TAGCTGGGTCTCTGGAAACAGCCAAGTGACTATAGCTGGGTCTCTGGAAACTACTAGGAATCTGTAGCT i canFam3.chr1 C 0 C 0 a score=5784362.000000 s hg38.chr19_GL949747v2_alt 336424 1815 + 729520 GGGTCTCTGGAAATAACTGAGAAACAGTCTGTCCAAGGAGCTGCTCGATTGTAGAAGGGACCACCTGGCTAACGAACCTTCTGGATGCTGGTTAGAAACCTCCAGTCTCCAGCTCTTGTCTCCAGGACAGCTGCCTGGCTG-GCTTTCTAGATGAAGAGGAATCCAAC-AGGAAGCCTTCCAAATGGCTGCTTCAGGCTTTTCCTAGAGTGACTTTCTACCC--TCAGGTGCAGAGGCCAGGTGGGTATGGGGTCAGTGTCTGGCAACGGCTGCATACGTGATGGACTCGGCCATGGGCTTTGTGGACTGTGGGGACACAGCCCGGGCTGTCCTCTGTGTGAGGGCCCAGTGGTCCAGCTGAGCATACGTCACCTCCTGGGAACTCCCTGCAGCCAGGGCCTAAGAGGGAGAGACCCAGGGTGAGGGAGTGCCTGGTGGAGGGTGAGG-----------------CGAGGGGCTGTGGGGAGGGAGGGCtg--tggcggcca-tctccatg-ggccctgaggaccc--tctcct-aaattgcatccgtgtgaagagccctcccacagggtattggggttggtttacgtga-caatgaac-aaggcagaagggaagactcctgacttccaagctgagccaaaagacatggtgcttctgtcccctccctgccacccatccttggatccctccctctgggggaagccggctgtgtggagaggcccctgtgagaggaacagaggtttcctgccca-cagcc-ggggaagtgagcgtcttggacgtggatcctcc-agcccacgggagccttcggatgcacacagccctgg--------------gcgacctctcgacagcaacctcaggacaggccgtgagccggaaccgcccagctgagccactcctgaattcctaacccaaggaactgaga---tttttttaagctgc--taaatttggggtactttAATAACTAGTAGGAAGGCTCACCGAGGTGTCTGTCTCTCTGTC---------------------------------------------------------------------------------CTTCTCAGGAAGTCCATTGACTGTGGCCTTGTCTTGGGGAGA-----AAATACATGGTCAGTTTTCTGGGGAGGATGTCGCAAGGCAAATCTGCCTGAGACCCCCACCCCCAGCTTCCGATGAC-ATCCTGCACCCAATGTATAATACGACCTTCTAGAATGTTCCCAAAGATTCTTCCCCCCACCCCCCACATTGCATCTGGATTGGCACCAAGTCCCCACTTCCCCATCCCAGGCCTGTCCCTCCT-CCTCCCCCTTTACCTGCTGTCCTCTCTAGAACATCAACAGCCAGGTCAGGCCTAAGAGGAAAAATAAAAGTGAACCTCAGGGG-CAGCCTGGCGGCCGAGGACTGGGTGGAGGTCCAGGAGTCATTCCCAGGGGCCTCACCTCTGCTGTGGCTTCTGCTCCTCGTCCTTGCTTCTGGGGGGCCCTAAGGACAGTC-GGGGTGTGAATTAAGGAGA----CCTTCTTCCTAGCCTCTCCTGACAGCTT-CCCAGGTCACCCCACCCTGCCCCTGAGACCTACCCTGCTTTATCTGATTCTGGCGATggaggcagaagaggaccaggaggaggagacagaagaggaagaCCACTGAGACCCCGATGAGAATATACAGATGCTCAGCTTTCAGGCCTTGGGAAGCAGGTGCATCTAAGAAAGACAGAAACAGGATTTCAGCAGTGTGcatttattgagcacctactgtataccacacacacgtcacgtgcgtttcatagacttactaatatataaaatatcttaggtaaataat----------------------------------------agtcctgcagtacagggatcgttatccccttcttccaccaccggggtcctgagtgctggagt----cctctgcacagggacacagac--tgccattggc s panTro4.chr19 59284058 1796 + 63644993 GGGTCTCTGGAAATAACTGAGAAACAGTCTGTCCAAGGAGCTGCTCGATTGTAGAAGGGACCACCTGGCTAATGAACCTTCTGGATGCTGGTTAGAAACCTCCAGTCTCCAGCTCTTGTCTGCAGGACAGCTGCCTGGCTG-GCTTTCTAGATGAAGAGGAATCCAAA-AGGAAGCCTTCCAAATGGCTGCTTCAGGCTTTTCCTAGAGTGACTTTCTACCC--TCAGGTGCAGAGGCCAGGTGGGTATGGGGTCAGTGTCTGGCAACGGCTGCATACGTGATGGACTCGGCCATGGGCTTTGTGGACCGTGGGGACACAGCCCGGGCTGTCCTCTGTGTGAGGGCCCAGTGGTCCAGCTGAGCATACGTCACCTCCTGGGAACTCCCTGCAGCCAGGGCCTAAGAGGGAGAGACCCAGGGTGAGGGAGTGCCTGGTGGAGGGTGAGG-----------------CGAGGGGCTGTGGGGAGGGAGGGCtg--tggcggcca-tctccatg-ggccctgaggaccc--tctcct-aaattgcatccatgtgaagagccctcccac-gggtattggggttggtttacgtga-caatgaac-aaggcagaagggaagactcctgacttccaagctgagccaaaagacatggtgcttctgtcccctccctgccacccatccttggatccctccctctgggggaagccggcggtgtggagaggcccctgtgagaggaacagaggtttcctgccca-cagcc-gggaaagtgagcgtcttggacgtggatcctcc-agcccacgggagccttcagatgcacacagccctgg--------------gcgacctctcgacagcaacctcaggacaggccgtgagccggaaccgcccagctgagccactcctgaattcccaaccctgggaactgaga---tttttttaagctgc--taaatttggggtactttAATAACTAGTAGGAAGGCTCACCGAGCTGTCCGTCTCTCTGTC---------------------------------------------------------------------------------CTTCTTAGGAAGTCCATTGACTGTGGCCTTGTCTTGGGGAGA-----AAATACATGGTCAGTTTTCTGGGAAGGATGTCACAAGGCAAATCTGCCTGAGACCCCC-CCCCCAGCTTCCGATGAC-ATCCTGCACC-----------------TTCTAGAATGTTCCCAAAGATTCTTCCCACCGCCCCCCACATTGCATCTGGATTGGCACCAAGTCCCCACTTCCCCATCCCAGGCCTGTCCCTCCT-CCTCCTCCTTTACCTGCTGTCCTCTCTAGAACATCAACAGTCAGGTCGGGCCTGAGAGGAAAAATAAAAGTGAACCTCAGGGG-CAGCCTGGCGGCCGAGCACTGGGTGGAGGTCCGGGAGTCATTCCCAGGGGCCTCACCTCTGCTGTGGCTTCTGCTCCTCGTCCTTGCTTCTGGGGGGCCCTGAGGACAGTC-GGGGTGTGAATTAAGGAGA----CTTTCTTCCTAGCCTCTCCTGACACCTT-CCCAGGTCACTCCACCCTGCCCCTGAGACCTACCCTGCTTTATCTGATTCTGGCGATGGAGGCAGAAGAGGACCAGGAGGAGGAGACAGAAGAGGAAGACCACTGAGACCCCGATGAGAATATAAAGATGCTCAGCTTTCAGGCCTTGGGAAGCAGGTGCATCTAAGAAAGACAGAAACAGGATTTCAGCAGTGCGcatttattgagcacctactgtataccacacacatttcatgtgcgtttcatagacttactaatatataaaatatcttaggtaaataat----------------------------------------agtcctgcagcacagggatcgttatccccttcttccaccaccggggtcctgagtgctggagt----cctctgcacagtgacacagac--ggccattggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56166480 1809 + 60714840 GGGTCTCTGGAAATAACTGAGAAACAGTCTGTCCAAGGAGCTGCTCAATTGTAGAAGGGACCACCTGGCTAATGAACCTTCTGGATGCTGGTTAGAAACCTCCAGTTTCCAGCTCTTGTCTCCAGGACAGCTGCCTGGCTG-GCTTTCTAGACGAAGATGAGCCCAAG-GGGAAGCCTTCCAAATGGTTGCTTCAGGCTTTTCCTAGAGTGACTTTCTATCC--TCAGGTGCAGAGGCCAGGTGGGTATGGGGTCAGTGTCTGGCAACGGCTGCATACATGCTGGACTCAGCCACGGGCTCTGTGGACTGTGGGGACACAGCCTGGGCTGTCCTCTGTGTGAGGGCCCAGTGGTCCAGCTGAGCATACGTCACCTCCTGGGAACTCCCTGCAGCCAGGGCCTAAGAGAGAGAGACCCGGGGTGAGGGAGTGCCTGGTGGAGGGTGAGG-----------------TGAGGGGCTGTGGGGAGGGAGGGCtg--tggtggcca-tcttcatg-ggccctgaggaccc--tctcctgaaattgcatccgtgtgaagagccctcccacagggtattggggttggtttacatga-caatgaac-aaggcagaagggaagactcctgacttccaagctgagccaaaagacattgtgcttctgtcccctccctgccacccatccttggatccctccctctgggggaagccggtggtgtggagtggcccctgtgagaggaacagaggtttcctgccca-cagccggggggagtgagcgtcttggacatggatcctccaagcccacgggagccttcagatgcacacagccctgg--------------gagacctctcaacggcaacctcaggacaggccgtgagccggaaccgcccagctgagccactcctgaattcccaaccctaggaactgaga---ttttttaaagctgc--taaatttggggtactttAATAACTAGTAGGGAGGCTCACCGAGGTGTCCGTCTCTCTGTC---------------------------------------------------------------------------------CTTCTCAGGAAGTCCACTGACTGTGGTCTTGTCTTGGGGAGA-----AAGTACAGGGTCGGTTTTCTGGGGAGGATGTCACAAGGCAAGTCTGCCTGAGACCCCC-CC----GCTTCCGATGAC-ATCCTGCACCCAATCTATAATACAACCTTCTAGAATGTT-CCAAAGAATCTTCCCCCCGCCCCCCACATTGCATCTGGATTGGCACCAAGTTCCCACTTCCCCATCTCACACCTGTCCCTCCT-CCTTCCCCTTTACCTGCTGTCCTCTCTAGAACATCAACAGCCAGGTCAGGCCTGAGAGGAAAAATAAAAGTGAACCTCAGGGG-CAGCCTGGTGGCCGAGGACCAGGTGGAGGTCCAGGAGTCATTCCCAGGGGCCTCACCTCTGCTGTGGCTTCTGCTCCTTGTCCTTGCTTCTGGGGGGCCCTGAGGACAGTC-GGGGTGTGAATTAAGGAGA----TCTTCTTCCTAGCCTCTCCTGACAGCTT-CCCAGGTCACTCCACCCTGCCCCTGAGACCTACCCTGCTTTATCTGATTCTGGCGACGGAGGAAGAAGAGGACC---AGGAGGAGACAGAAGAGGAAGACCACTGAGACCCCGATGAGAATATAAAGATGCTCAGCACTCAGGCCTTGAGAAGCAGGTGCATCTAAGAAAGACAGAAACAGATTTTCAGCAGTGTGcatttattgagcacctactgtataccacacacacgtcacgtgcgtttcatagacttactaatatataaaatatcttaggtaaataat----------------------------------------agtcctgcagcacagggatcattatccccttcttccaccaccggggtcctgagtgctggggt----cctctgcacagggacacagcc--ggccattggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102911545 1823 - 106955855 GGGTCTCTGGAAATAACTGAGAAACAGTCTGTCCAAGGAACTGCTCAATTGTAGAAGGGACCACCTGGCTAAAGAACCTTCTGGATGCTGGTTAGAAATCTCCAGTCTCCAGCTCTTGTCT-CAGGACAGCTGCCTGGCTG-GCTTTCCAGACGAGGATGAGCCCAAG-GGGAAGCCTTCCACATGGCTGCTTCAGGCTTTTCCTAGAGTGACTTTCTATCC--GCAGGTGCAGAGGCCAGGT--------GCTCAGTGTCTGGCAATGGCTGCATACATGCTGGACTCAGCCATGGGCTCTGTGGACTGTGGGGGCACAGCCTGGGCTGTCCTCCGTGTGAGGGCCCAATGGTCCAGCTGAGCATACGTCACCTCCTGCGAACTCCCTGCAGCCGGGGCCTGGGAGAGAGAGACCCAAGGTGAGGGAGTGCCTGGTGGAGGGTGAGG-----------------TGAGGGGCTGTGGGGATGGAGGGCtg--tggcggcca-tctccacg-ggccctgaggaccc--tctcctgaaattgcatccatgtgaagagccctcccacagggtattggggttggtttaggtga-cagtgaac-aaggcagaagggaagactcctgacttccaagccgagccaaaagacatcgtgtttctgtcccctccccgccacccatccttggatccctccctctgggggaagccggcggtgtggagaggcccctgtgagaggaacagaggtttcctgccca-cagcc-gggggagtgagcgtcttggacgtggatcctcc-agcccacgggagccttcagatgcacacagccctgggtgacctctcgacagcgacctctcgacggcgacctcaggacaggccgtgagctggaaccgcccagctgagccactcctgaattcccaaccctaggaactgagat-ttttttttaagctgc--taaatttggggtactttaataaccagtaggaaGGCTCACCGAGGTGTCCGTCTCTCTGTC---------------------------------------------------------------------------------CTTCTCAGGACGTCCATTGACTGTGGCCTCGTCTTGGGGAGA-----AAATACATGGTCAGTTTTCTGGGGAGGATGTCACAAGGCAAATCTGCCTGAGACCCCC-CC---AGCTTCCGATGAC-ATCCTGCACCCAATCTATAATACAACCTTCTAGAATGTTCCCAAAGATTCTTCCCACCGCCCCCCACATTGCAACTGGATTGGCACCAAGTGCCCACTTCCCCATCCCAGGCGTGTCCCTCCT-TCTCCCCCTTTACCTGCTGTCCTCTCTAGCACATCAACAGTCAGGTGGGGCCTGAGAGGAAAAATAAAAGTGAACCTCAGGGG-CAGCCTGGCGGCCGAGGACTGGGTGGAGGTCCAGGAGTCATTCCCAGGGGCCTCACCTCTGCTGTGGCTTCTGCTCCTCGTCCTTGCTTCTGGGGGGCCCTGAGGACAGTC-GGGGTGTGAATTAAGGAGA----CCTTCTTCCTAGCCTCTCCTGACAGCTT-CCCAGGTCACTCCACCCTGCCCCTGAGACCTACCCTGCTTTATCTGATTCTGGCGATggaggaagaagaggaccaggaggaggagacagaggaggaagaCCACTGAGACCCCGATGAGAATATAGAGATGCTCAGCTTTCAGGTCTTGGGAAGCAGGTGCATCTAAGAAAGACAGAAACAGATTTTCAGCAGTGTGcatttattgagcacctactgtataccacacac--gtcgtgtgcgtgtcatagacttactaatatataaaatctctcaggtaaacaat----------------------------------------agtcctgcagcacagggatcgttatccccttcttccaCCACGGGGGTCCTGAGTGCTGCAGTGTCCCCTCTGCACAGGGACACAGCCGGGGCCACTGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60170532 1886 + 64156825 GGGTCTCTGGAATCAACTGAGAAA----CTGTCCAAGGAGATGCTCAATTGTAGAAGGGACTACCTGGCTAACGAACCTTCTGGATGCTGGTTAGAAATCTCCAGTCTCCAGCTCTTGTCTCCAGGTCAGCTGCCTGTCTG-GCTTTCTAGACGAAGATGAGTCCAAG-GGGAAGCCTTCCAAATGGCCACTTCAGCCTTTTCCTAGAGTGACTTTATATCC--TCAGGTGTAGAGGTCAGGTGGGCCGGGGGTCAGTGTCTGGCAACAGCTGCATACGTGCTGGACTCAGCCATGGGCTCTGTGGACTGTGGGGACACAGCCTGGGCTGTCCTCCGTGTGAGGGCCCAGTGGTCCAGCTGCGCATACATCACCTCCTGGGAACTCCCTGCAGCCGGGGCCTGGGAGAGAGAGACCCAGGGTGAGGGAGTGCCTGGTGGAGGGCGAGG-----------------TGAGGGGCTGTGGGACTGGAGGGCtg--tggcggcca-tctccatg-ggccccgaggaccc--tctcctgaaattgcatccgtgtgaagagccctcccacagggtattagggttggtctacgtga-caatgaac-aaggcagaagggaagactcctgacttccaagctgaggc-aaagacatcgcgcttccg-cccctccccaacacccatccttggatccctccctctgggggaatcc-gcggtgtggagaggcccctgtgagaggaacagaggtttcctgtcca-cagcc-gtgggagtgagcgtcttggacgtggatcctcc-agcccacgggagccttcagatgcacacagccctca--------------gcgacctctcgacagcaacctcaggacaggccatgagccagaaccgcccagctgagccactcctgaattcccagtccaaggaactgaga---tttttttaagctgc--tgaatgtggggaacttgAATAACTAGGAGAAAGGCTCACCGAGGTGTCCGTCTCTCTGTCCTTCTCAGGAAGTCCATTGATTGTGGCCTTCTCAGGAAGTCCATTGATTGTGGCCTTCTCAGGAAGTCCATTGATTGTGGCCTTCTCAGGAAGTCCATTGATTGTGGCCTTGTCTGGGGGAGA-----AAATACATGGCCAGTTTTCTGGGAAGGATGTCACAAGGCAAATCTGCCTGAGACCCCC-CA----GCTTCAGTTGGC-ATCCTGCACCCAATCTATAATATGACCTTCTAGAATGTTCCCAAAGATTCTTCCCCCCTCCCCCCACATTGCATCTGGATTGGCAAGAAGTTCCCACTTCCCCATCCCAGGCCTGTCCCTCCT-CCTCCCCCTTCACCTTCTGTCCTCTCTAGAACATCAACAGCCAGGTCGGGCCTGAGAGGAAAAATAAAAGTGAACCTCAGGGG-CAGCCCGGGGGCAGAGGACTGGGTGGAGGTCCAGGAGTCATTCCCAGGGGCCTCACCTCTGCTGTAGCTTCTGCTCCTCGTCCTTGCTTCTGGGGGCCCCTGAGGACAGTC-GGGGTATGAATTAAGGAGA----CCTTCTTCCTAGCCTCTCCTGACAGCTTCCCCGGGTCACTCCACCCTGCCCCTGAGACCTACCCTGCTTCATCTGATTCTGGCGATGGAGGAAAAAGAGGACCAGAAGGAGGAGACAAAAGAGGAAGACCACTGAGACCCCAGTGAGAATATAAAGATGCTCAGCACTCAGGCCTTGGGAAGCAGGTGCATCTAAGAAAGACAGAAACAGGTTTTCAGCAGTGTGcatttattgagtgcctactgtatacc--acacatgtcacgtgcgtgtcatagacttactaatatataaaatctctcaggtaaataat----------------------------------------agtcctgcagcacagggatcgttatccccttcttccaccactggggtcctgagtgctgaggc----cctctgcacagggacacagccgaggccattggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55270359 1833 + 59248254 GGGTCTCTGGAATCAACTGAGAAA----CTGTCCAAGGAGATGCTCAATTGTAGAAGGGACTACCTGGCTAACGAACCTTCTGGATGCTGGTTAGAAATCTCCAGTCTCCAGCTCTTGTCTCCAGGTCAGCTGCCTGGCTG-GCTTTCTAGACGAAGATGAGTCCAAG-GGGAAGCCTTCCAAATGGCCGCTTCAGCCTTTTCCTAGAGTGACTTTATATCC--TCAGGTGCAGAGGCCAGGTGGGCCTGGGGTCAGTGTCTGGCAACAGCTGCATACGTGCTGGACTCAGCCATGGGCTCTGTGGACTGTGGGGACACAGCCTGGGCTGTCCTCCATGTGAGGGCCCAGTGGTCCAGCTGAGCATACGTCACCTCCTGGGAACTCCCTGCAGCCGGGGCCTGGGAGAGAGAGACCCAGGGTGAGGGAGTGCCTGGTGGAGGGTGAGG-----------------TGAGGGGCTGTGGGACTGGAGGGCtg--tggcggcca-tctccatg-ggccctgaggaccc--tctcctgaaattgcatccgtgtgaagagccctcccacagggtattagggttggtctatgtga-caatgaac-aaggcagaagggaagactcctgacttccaagctgaggcaaaagacatcgcgcttccg-cccctccccaacacccatccttggatccctccctctgggggaatcc-gcggtgtggagaggcccctgtgagaggaacagaggtttcctgccca-cagcc-gtgggagtgagcgtcttggacgtagagcctcc-agcccacaagagccttcagatggacacagccctgg--------------gcgacctctcgacagcaacctcaggacaggccatgagccagaaccgcccagctgaaccactcctgaattcccagtccaaggaactgaga---tttttttaagctgc--taaatgtggggaacttgAATAACTAGGAGGAAGGCTCACCGAGGTGTCCGTCTCTCTGTCCTTCTCAGGAAGTCCATTGATTGTGGC------------------------------------------------------CTTCTCAGGAAGTCCATTGACTGTGGCCTTGTCTGGGGGAGA-----AAATACATGGCCAGTTTTCTGGGAAGGATGTCACAAGGCAAATCTGCCTGAGACCCCC-CA----GCTTCAGTTGAT-ATCCTGCACCCAATCGATAATACGACCTTCTAGAATGTTCCCAAAGATTCTTCCCCCCGCCCCCCACATTGCATCTGGATTGGCAAGAAGTTCCCACTTCCCCATCCCAGGCCTGTCCCTCCT-CCTCCCCCTTTACCTGCTGTCCTCTCTAGAACATCAACAGCCAGGTCGGGCCTGAGAGGAAAAATAAAAGTGAACCTCAGGGG-CAGCCTGGGGGCAGAGGACTGGGTGGAGGTCCAGGAGTCATTCCCAGGGGCCTCACCTCTGCTGTAGCTTCTGCTCCTCGTCCTTGCTTCTGGGGGGCCCTGAGGACAGTC-AGGGTACAAATTAAGGAGA----CCTTCTTCCTAGCCTCTCCTGACAGCTTCCCCGGGTCACTCCACCCTGCCCCTGAGACCTACCCTGCTTCATCTGATTCTGGCGATGGAGGAAAAAGAGGACCAGAAGGAGGAGACAAAAGAGGAAGACCACTGAGACCCCGATGAGAATATAAAGATGCTCAGCACTCAGGCCTTGGGAAGCAGGTGCATCTAAGAAAGACAGAAACAGGTGTTCAGCAGTGTGcatttattgagcaccgactgtatacc--acacatgtcacgtgcgtgtcatagacttactaatatataaaatctctcaggtaaataat----------------------------------------agtcctgcagcacagggatcgttatccccttcttccaccaccggagtcctgagtgctggggc----cctctgcacagggacacagccgaggccattggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47360373 1834 + 51301725 GGGTCTCTGGAATCAACTGAGAAA----CTGTCCAAAGAGCTGCTCAATTGTAGAAGGGACTACCTGGCTAACGAAACTTCTGGATGCTGGTTAGAAACCTCCAGTCTCCAGCTCATGTCTCAGGTCGAGCTGCCTGGCTGAGCTTTCTGGATGAAGATGAGTCCAAGAGAGAAGCCTTCCAAATGGCCGCTTCAGCCTTTTCCTAGAGTGACTTTATATCC--TCAGGTGCAGAGGCCAGGTGGGCCTGGGGTCAGTGTCTGGCAACAGCTGCATATGTGCTGGACTCAGCCATGGGCTCTGTGGACCGTGGGGACACAGCCTGGGCTGTCCTCCGTGTGAGGGCCCAGTGGTCCAGCTGCGCATATGTCACCTCCTGGGAACTCCCTGCAGCCGGggcctgagagagagagacccagggTGAGGGAGTGCCTGGTGGAGGGTGAGG-----------------TGACGGGCTGTGGGACTGGAGGGCTG--TGGCAGCCA-TCTCCATG-GGCCCCAAGGACCC--TCTCCTGAAATTGCATCCTTGTGAAGAGCCCTCCCACAGGGTATTAGGGTTGGTCTATGTGA-CAATGAAC-AAGGCAGAAGGGAAGACTCCTGACTTCCAAGTTGAGGCAAAAGACATCGTGCTTCCG-CCCCTCCCCGCCACCCATCCTTGGATCCCTCCCTCTGGGGGAATCC-GCGGTGTGGAGAGGCCCCTGTGAGAGGAACAGAGGTTTCCTGCCCA-CAGCC-GTGGGAGTGAGCATCTTGGACGTGGATCCTCC-AGCCCACGGGAGCCTTCAGATGCACACAGCCCTGG--------------GCGACCTCTCGACAGCAACCTCAGGACAGACCGTGAGCCGGAACCGCCCTGCTGAACCACTCCTGAATTCCCAGTCCAAGGAACTGAGA---tttttttAAGCTTC--TAAATGTGGGGAACTTGAATAACTAGGAGGAAGGCTCACCGAGGTGTCCGTCTCTCTGTCCTTCTCAGGAAGTCCATTGATTGTAGC------------------------------------------------------CTTCTCAGGAAGTCCATTGACTGTGGCCTTGTCTGGGGGAGA-----AAATACATGGCCAGTTTTCTGGGAAGGATGTCACAAGGCAAATCTGCCTGAGACCCCC-CA----GCTTCAGTTGAC-ATCCTGCACCCAATCAATAATATGACTTTCTAGAATGTTCCCAAAGAttcttccccccgccccccacattGCATCTGGATTGGCAAGAAGTTCCCACTTCCCCATCCCAGGcctgtccctcct-cctctccctttacCTGCTGTCCTCTCTAGAACATCAACAGCCAGGTCGGGcctgagaggaaaaataaaagtgaaccTCAGGGG-CAGCCTGGGGGCAGAGGACTGGGTGGAGGTCCAGGAGTCATTCCCAGGGGCCTCACCTCTGCTGTAGCTTCTGCTCCTCGTCCTTGCTTCTGGGGGGCCCTGAGGACAGTC-GGGGTACGAATTAAGGAGA----CCTTCTTCCTAGCCTCTCCTGACAGCTTCCCCAGGTCACTCCACCCTGCCCCTGAGACCTACCCTGCTTCATCTGATTCTGGCGATGGAGGAAAAAGAGGACC---AGGAGGAGACAAAAGAGGAAGACCACTGAGACCCCGATGAGAATATAAAGATGCTCAGCACTCAGGCCTTGGGAAGCAGGTGCATCTAAGACAGACAGAAACAGGTTTTCAGCAGtgtgcatttattgagcacctactgtataccaTACACATGTCACATGCGTGTCATAAACTTACTAATATATAAAATCTCTCAGGTAAATAAT----------------------------------------AGTCCTGCAGCACAGGGATTGTTATCCCCTTCTTCCACCACCGGAGTCCTGAGTGCTGGGGC----TCTCTGCACAGGGACATAGCCGGGGCCATTGGC i papAnu2.chr19 M 398 C 0 s chlSab2.chr6 47066549 1832 + 50890351 GGGTCTCTGGAATCAACTGAGAAA----CTGTCCAAGGAGCTGCTCAATTGTAGAAGGGACTACCTGGCTAACGAACCTTCTGGAAGCTGGTTAGAAACCTCCAGTCTCCAGCTCTTGTCTCCAGGTCGGCTGCCTGGCTG-GCTTTCTAGATGAAGATGAGTCCAAG-GGGAAGCCTTCCAAATGGCCACTTCAGGCTTCTCCTAGAGTGACTTTATATCC--TCAGGTGTAGAGGTCAGGTGGGCCTGGGGTCAGTGTCTGGCAACAGCTGCATACGTGCTGGACTCAGCCATGGGCTCTGTGGACTGTGGGGAAACAGCCTGGGCTGTCCTCCGTGTGAGGGCCCAGTGGTCCAGCTGCGCATACGTCACCTCCTGGGAACTCCCTGCAGCCGGGGCCTGGGAGAGAGAGACCCAGGGTGAGGGAGTGCCTGGTGGAGGGTGAGG-----------------TGAGGGGTTGTGGGGCTGGAGGGCtg--tggcggcca-tctccatg-ggccccgaggaccc--tctcctgaaattgcatccgtgtgaagagccctcccacagggtattagggttggtctacgtga-caatgaac-aaggcagaagggaaggctcctgacttcctagttgaggcaaaagacattgtgcttccg-cccctccccgccacccatccttggatccctccctctgggggaatcc-gcggtgtggagaggcccctgtgagaggaacagaggtttcctgtcca-cagcc-gtgggagtgagcgtcttggacgtggatcctcc-agcccacgggaaccttcagatgcacacagccctgg--------------gcgacctctcgacagcaacctcaggacaggccatgagccagaaccgcccagctgaaccactcctgaattcctgacccaaggagctgaga--ttttttttaagctgc--taaatgtggggaacttgAATAACTAGGAGGAAGGCTCACCGAGGTGTCCGTCTCTCTGTCCTCCTCAGGAAGTCCATTGATTGTGGC------------------------------------------------------CTTCTCAGGAAGTCCATTGACTGTGGCCTTGTCTGGGGGAGA-----AAATACATGGCCAGTTTTCTGGGAAGGATGTCACAAGGCAAATCTGCCTGAGACCCCC-CA----GCTTCAGTTGAC-ATCCTGCACCCAATCGATAATACGACCTTCTAGAATGTTCCCAAAGATTCTTCCCCCCGCCCCCCACATTGCATCTGGATTGGCAAGAAGTTCCCACTTCCCCATCCCAGGCCTGTCCCTCCT-CCTCCCCCTTTACCTGCTGTCCTCTCTAGAACATCAACAGCCAGGTCAGGCCTGAGAGGAAAAATAAAAGTGAACCTCAGGGG-CAGCCTGGGGGCAGAGGACTGGGTGGAGGTCCAGGAGTCATTCCCAGGGGCCTCACCTCTGCTGTAGCTTCTGCTCCTCGTCCTTGCTTCTGGGGGGCCCTGAGGACAGTC-GGGGTACGAATTAAGGAGA----CCTTCTTCCTAGCCTCTCCTGACAGCTTCCCCAGGTCACTCCACCCTGCCCCTGAGACCTACCCTGCTTCATCTGATTCTGGCGATGGAGGAAAAAGAGGACCAGAAGGAGGAGACAAAAGAGGAAGACCACTGAGACCCCGATGAGAATATAAAGATGCTCAGCACTCAGGCCTTGGGAAGCAGGTGCATCTA----AGACAGAAACAGGTTTTCAGCAGTGTGcatttattgagcacctactgtataccacacacatgtcacgtgcgtgtcataaacttactaacatataaaatctctcaggtaaataat----------------------------------------agtcctgcagcacagggatcgttatccccttcttccaccactggggtcctgagtgctggggt----cctctgcacagggacacagctgaggccattggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45588602 1837 + 49145316 GGGTCTCTGGAATCAGCTGAGAGACAGTCTGTCCAAGGAGCTGCTCAATTGCAGAAGGGACCAGCTGGCTAATGAGCCTTCCGCATGCCGGTTAGAAACCTCCAGGCTCCAGCTCTTGTCTCCAG---ATCTGCCTGGGAG-CCTTTCCAGACGAGGATGAGTCCAAG-CCGAAGCCTTCCAAAGGGCTGCTTCAGGCTTTTCCTAGAGT----------CT--CCAGGTGTAGAGGCCAGGTGGCCCTGGGGTCAGCGTTTGACAATGGCTGCGTACATGCTGGCCTCGGCCAAGGGCTCTGTGGAC---------ACAGCCTGGGCTGTCCTGCGTGTGAGGGCCCCGTGGTCCAGCTGAGCATATGTCACCTCCTGGGGGCCCTCTGCAGTCGGGGCCTGGGAGAGAGAGAGCCAGGGTGACGGAGAGGCTGGTGGAGGGTGAGGATGTGGGGCTGTGGGGATGGAGGGCTGTGGGGATGGAGGGCtg--tggttgcca-tctccatg-ggccccgaggaccc--actcctgaaaatgcatccgtgtgaagagcccacccacagggaatgagggttgctctatgtga-cagtgaac-aaggcagaagtgaagactcctaacttccaagctgaggcaaaagacattgtgcttctg--ccctcccca-----cacctttgggtccctccctctgggggaatctggcagtgtggagaggcccctgtgagaggaacagaggcctctg--ctg-cagct-gtgggagtgagcgtctcggttgtggagcctcc-agcccacaggacccttcagatgcacacagccctgg--------------gcgacctctcgacagcaacctcagcacagactgtgagctggaactgcccagctgagccactcctgaattcctgacccaaggaactgaga--ctttttttaagctgc--taaatttgggttactttCATAACTAGCGGGAAGGCTCACCGAGGTGTTGGTCTCTCTGTC---------------------------------------------------------------------------------CTTCTCAGGAAGTGCATCAACTGTGGCCATGTCTGGGGGACA-----AGACACA-GGTCATTTTCCTGGGGAGGATGTCACAGGGCAAATCTGCCTGAGACCCC--CA----GCTTCAGATGTC-ATCCTGCACCCAATCTATAATACGGCCTTCTAGAATGTTCCTGAAGATTCTTCCCCCCTCCCCCCGCATTGCATCTGGATTGGCACCAAGTTCCCACTTCCCTGTCCCAGGCCTGTCCCTCCT-CCTCCCTCTTTACCTGCTTTTCTCTCTAGAACATCAACAGCCATGTTGGGCCTGAAAGGAAAAATAAAAATGAACATTAGGGG-CAGCCTGGCGGCAGAGGACTGGATGGATGTCCAGGACTCATTCCCGGGGGCCTCACCTCTGCTGTGGCTTCTCCTCCTCATCCTTGCTTCTGGGGGGCCCTGAGGACAGTC-GGGGTCTGAATTAAGGAGA----CCTTCTTCCTAGCATCTCCTGACAGCTTCCCCAAGCCTCTCCACCCTGCCTCTGACACCTACCCTGCTTTATCTGATTCTGGCGATGGAGGAAGAAGAGGGCCAGGAGGAAGAGACAAAGGAGGAAGACCACTGAGACCACGATGAGAATATAGAGATGCTCAGCTTTCAGGCCTTGGGGAGCAGGGGCATCTAAGAAAGACAGAAACAGGTTTTCAGCAGTGTGCACTTACTGAGCACCTACTGCATACCACACACATATCATGTGTGTGTCACAGACGTACTAATATATCAGATCTCTCAGATAAATAATCGTCCCACAGCACAGGGATTAAAATCTCTCAGGGGGAaacagtcctgcagcacagggatcattatccgcttcttccaccactggggtcctgagtgctggggt----cctctgcacagggacacagcc--agccactggc i calJac3.chr22 C 0 C 0 s canFam3.chr1 19757201 1651 - 122678785 GGGTCTTTGGAAATAAATGCTACAGGCTCTCTCCAAGGATCTAGTTGATGTCAGGAGGGACCACATGGCTAATGAATCTTCTAAATGTTGACTAGAAGCCTCCTGACACTGGC-CTTGCCTCCAGGATCTCTGACTGTATG-GCTTTCCAGAAAGGGATGATTCCATT-GGGAAGTCCTCCAAATGGCCACTTCATGTTTTTGCAGGAATGACGCCCCATGCGTCTAGGAGCAGAGGCGAGGTGGGCATGGAGTCAGTGTCTGGCAAGGGCTGCATATGTACTGGACTCAGCCATGGGCTCCACAGACTGTGGGGATGTGGCTGGAGCTGTCCTCTGTGTGAGGATGTGGTGGTCCAGCTGAGCATATGTCACGTCCTGGGGGCCTCCTGCAGTAGGGGTCTGAGAGAGAGAGACCCA-GGTGAG-------------------AAGG-----------------TAGGGGACTGTGGGAAGGGAAGACTAACtagtagccagcctccatgtgacccccatgatcccacctcctgggat--cacccctgtttagctccttcccacttaggatcagggctagactgtgtgaccagtaggctatggcagaatgagggcatgcca---------------caaaagataatgtggcttcggcccctccct----------ctctgtgacctctctctggggagctgc-----catgGAGAAGCCCCAGTGGGGGggaacggagggccctgccagtcagtc-aggggtgc---catactggaagtggatcttcc-agccctaggtgagct---gatg----cggccctgg--------------tccacatcttcacagccacctccaaaaagaccctgagccagaactaccccgctaacctggttccaaattgctgagcaaacaaatggagataactttgttaagcctcatttatcatgcggcaa-tggataaTGCACACAAGGACTTACGGAGATGCTCCCTTCCCTGTC---------------------------------------------------------------------------------CCTCTCAGGAAGTCTGCTGATTGTAGCCAGATCTGGAGGGGAGAGAGAGACAAGGGGTCAGGTCTCTGGGGTGGGTCTCGGAAGGCAAATTTGCCCAAAAATTCA-TA----GCTTCAGCTTTCAATATTATACTCCATCTGGAACA-----TCCTAGAATGTTTCCAAACATTC-------------------------------------------------CCCTCTCCCAGGCCTGTCCCTCCTCCCTGGCCTTTCACCTGGTGTCCTCTCTCGGATGTCAACAGCCGGGCTGACCCTGGAGGGAAAG--AACAGTGAGTCCTGGGGGCCCGCGTGGAGGCAGAGGACTGGGAGAAGGTCCGGG-GTCAGTCTCGGGGACCTTACCTCTCCTGGGTCCTCTGCTCCTCACCTTTGCTGCTGGAGGGCCCTGAGGACAATCAGGGGTATGAATTAAAAAGAAAGGTCTTCTTCCCAA------------------------CACCCCGACCCTCCCCTGAGACCTACTGTGTTTTTTCTGTTGCTGACGATGGATGAAGATGTGGGCCAGCAGGAGGACACAAAGGAACAAGGCCACAGAGACCCCAATAAGAATATAAACATGCTCTGTTGACAGGCCTGGGGGAACAGG----------GAAGATGGAACCAGATTATCAGGA-CGTGCATTTATTGACCACCTACTGCATTAC------------CGGGCATGT-----ACACACCTAGGTATAAAATCTCTGAAGTGCATAAT----------------------------------------AGTCCTATGACATGAGAAGCATTA--------TTCCAAAACCAGGGTCCTGAGTGCTGAAGT----CCTCTGTCCCGG-----------GGGCACTGGC i canFam3.chr1 C 0 C 0 a score=904124.000000 s hg38.chr19_GL949747v2_alt 338239 375 + 729520 agagcaggaatctgatcaaccccaaagcctgacctctttctccttccccaAGAGGCACACACCAGCTTCATGCTCCACGGCCCCCATCACTCACGCTCATTGTGACTGTTGTCCGACGGCCTCTGCGTGGGTCCTGGGAGGGAGGAAT--------CAGAAGGAGGAGGAGTTAGAGTCCTGAGCTGGACAGAGAAGGCTCTGAGTCCTCCCACATCCACTGTGGGGATCTCCCTTCACTCCCCAGGACCCT---GACTGCTCCCTCTAGACcagca--ccgaccagcagagtcttctgtgatgatggaaactttctacatc-tactgtccagcatgagagtcacacatagctattgatatttaaatttatccaaagttgaatggcatg s panTro4.chr19 59285854 373 + 63644993 agagcaggaatctgatcaaccccaaagcctgacctctttctccttccccaAGAGGCACACACCAGCTTCATGCTCCACGGCCCCCATCACTCACGCTCATTGTGACTGTTGTCCGACGGCCTCTGCGTGGGTCCTGGGAGGGAGGAAT--------CAGAAGGAGGAGGAGTTAGAGTCCTGAGCTGGACAGAGAAGGCTCTGAGTCCTCCCACGTCCACTGTGGGGATCTCCCTTCACTCCCCAGGACCCT---GACTGCTCCCTCTAGACcagca--ccgaccagcagagtcttctgtgatgatggaaactttctacatc-tactgtccagcatgag--tcacacatagctattgatatttaaatttatccaaagttgaatggcatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56168289 375 + 60714840 agagcaggaatctgatcaaccccaaagcctgacctctttctccttccccaAGAGGCACACACCAGGCTCATGCTCCACGGCCCCCATCACTCACGCTCATTGTGACTGTTGTCCGACGGCCTCTGCATGGGTCCTGGGAGGGAAGATT--------CAGAAGGAGGAGGAGTTAGAGTCCTGAGCTGGACAGAGAAGGCTCTGAGTCCTCCCAAGTCCACTGTGGGGATCTCCCTTCACTCCCCAGGACCCT---GGCTGCTCCCTCTAGACcagca--ccgaccagcagagtcttctgtgatgatggaaactttctacatc-tactgtccagtatgagagtcacacatagctattgatatttaaatttatccgaagttgaatggcatg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60172418 373 + 64156825 agagtgggaatctgaccaaccccaaagcccaacctctttctccttccccaGGAGGCACACGCCAGGCTCACGCTCCATAGTCCCCATCACTCACGCTCATTGTGACTGTTGTCTGATGGCCTCTGCGTGGGTCCTGGGAGGGAGGAAT--------TAGAAGGAAGTGGAGTT--AGTCCTGAGCTGGACAGAGAAGGCTCTGAGTCCTCCCATGTCCACTGTGGGGATCTCTCTTCACTCCCCACGACCCT---GACCACTCCTTCTAGACcaaca--ccgtccagcagagtcttctgtgatgatggaaactttctacatc-tactgtccagtatgagagtcacacgtagctactgatatttaaatttatccaaagctgaatggtgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55272192 373 + 59248254 agagtgggaatctgaccaaccccaaagcccaacctctttctccttccccaGGAGGCACACGCCAGGCTCACACTCCATAGTCCCCATCACTCACGCTCATTGTGACTGTTGTCTGATGGCCTCTGCGTGGGTCCTGGGAGGGAGGAAT--------TAGAAGGAAGTGGAGTT--AGTCCTGAGCTGGACAGAGAAGGCTCTGAGTCCTCCCATGTCCACTGTGGGGATCTCTCTTCACTCCCCAGGACCCT---GACCGCTCCTTCTAGACcaaca--caatccagcagagtcttctgtgatgatggaaactttctacatc-tactgtccagtatgagagtcacacgtagctactgatatttaaatttatccaaagttgaatggtgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47362207 375 + 51301725 AGAGTGGGAATCTGACCAACCCCAAAGcccaacctctttctccttccccaggAGGCATACACCAGGCTCACGCTCCATAGTCCCCATCACTCACGCTCATTGTGACTGTTGTCTGATGGCCTCTGCGTGGGTCCTGGGAGGGAGGAAT--------CAGAAGGAAGAGGAGTTAGAGTCCTGAGCTGGACAGAGAAGGCTCTGAGTCCTCCCATGTCCACTGTGGGGATCTCTCTTCACTCCCCACGACCCT---GACCGCTCCTTCTAGACCAGCA--CTGACCAGCAGAGtcttctgtgatgatggaaactTTCTACATC-TACTGTCCAGTATGAGAGTCACACGTAGCTattgatatttaaatttattcaaagTTGAATGGTGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47068381 373 + 50890351 agagtgggaatctgaccaaccccaaagcccaacctctttctccttccccaGGAGGCACACGCCAGGCTCACGCTCCATAGTCCCCATCACTCACGCTCATTGTGACTGTTGTCTGATGGCCTCTGCGTGGGTCCTGGGAGGGAGGAAT--------TAGAAGGAAGTGGAGTT--AGTCCTGAGCTGGACAGAGAAGGCTCTGAGTCCTCCCATGTTCACTGTGGGGATCTCTCTTCACTCCCCACGACCCT---GACCGCTCCTTCTAGACcaaca--ccgtccagcagagtcttctgtgatgatggaaactttctacatc-tactgtccagtatgagagtcacacgtagctattgatatttaaatttattcaaagttgaatggtgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45590439 361 + 49145316 agaacgggaatctgaccaaccccaaagcctgacctctttctccttgcacAAGAGGGACACACCAGGCTCATGCCGCACAGTCCCCATCACTCACGCTCATTGTTACAGTTGTCTGAGGGCCTCGGCGTGGGTCCTGGGAGGGAGAAAT--------CAGAAAGAGGTGGAGGCAGAGCCCTGAGCTGGACAGAAAAGGTTCTGAGTCCTCCCACGACCCCTGCAGGAATCTCCCTTCATTCCCCAGGACCCT---GACCGCTCCTTCTAGACGAGCACCccgcccagcagagtcttctgtgatgatggaaactttctacatc-tactgtccagaatgaaagccacacgttgctgttgatattta----------------aaTGGCCTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19758852 314 - 122678785 AGAGCTGGACGATGACCAACACCAGAGTCCA--TTCCTTCCCCTTCCCCAAGGAGCACAC--------------------------TCACTCACCGAGACTGCTACTGTCATCCCAGGGCACCGGTGAGACTTCTAGGAAGGAGTAATGAAGCACACAGTCAGAAG----GTCAGAGGCCTGAGCTGGACAGAGAAGG--CTGAGTCTTCCCAAG---------------------------CCAGCACCCCAAAGGGGGGCTCCTCTAGA-----A--CAGAcccatggaactttgtacgaggatggacatgctctacatcgtgctgtc--gtatgataaccTCACCGGACTACTTCCATTGAaattt-----aaattaaatacattt i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102913368 0 - 106955855 C a score=1962405.000000 s hg38.chr19_GL949747v2_alt 338614 706 + 729520 agaag--------ctggctgcaccgtctgcacctccaggactcagtgaccccacgg-gcctgatgccatccctactggacggtgcagatacagcgcgtttccTGGGCGTGAAGCTGTAGTAGACATCGCTAATTTCTGCCCTCTGCGGATCTAGGCAGAGACCAACCACCCGCAACAAGAGGAAGGGAGACCTTCCCTCCCTGACCTCCTTCTGGGTTCCCA-CCAGAGGGCAAGAATC-CTCATGTCTGATTTTATCTGCCCTCGCGGCAACCCTC-TGACGGGGATGTAAC------------------CCGCCCTCCTGTGGG-AAGAATCCAAGTCCCGATGTGCTCCTCTTTCCTGAAGCCCTGCAGCTAGCGGGCGAGTGTGTGGGGCACCGCCCAGGCTCCCTACGCAGCGCATTGCAGGCCCGCCCGTCATCTCCTCCAACCTTCACCCTCCTCTGCACAGTGCACGCCACT-ACCCAATTCCCAGGTGGCTAAA-TGGGGTCCTGAGGGGCTCCCCCAA--ACCCAGGGTCCGAGCCAAGCGTC-CCTCTTCCAGGAACAGCGGTCCCTCCCCTCCCCCGGGGCTGAGGCAGCATCTTCAATATCCTTCAAGAAAGGCAGACATTCTCTCTTGGAA-TGT-CCTTCCCTCCTGCCTCGTCCACGGTCTAAGGTCCAGGACACCACCCG-TTATTCTACACCAT------------------------------------GACTTCCTG---GGCTTGGTCTTCATAACATTTGCC s panTro4.chr19 59286227 707 + 63644993 agaag--------ccggctgcaccgtgtgcacctccaggactcagtgaccccacgt-gcctgatgccatccctactggacggtgcagatacagcgcgtttccTGGGCGTGAAGCTGTGGTAGACATCGCTAATCTCTGCCCTCTGCGGATCTAGGCAGAGACCAACCACCCGCAAGAAGAGGAAGGGAGACCTTCCCTCCCTGACCTCCTTCTGGGTTCCCA-CCAGAGTGCAAGAATC-CCCGTGTCTGATTTTATCTGCCCTCGCGGCAACCCTC-TGACGGGGATGTAAC------------------CCGCCCTCCTGTGGG-AAGAATCCAAGTCCCGATGTGCTCCTGTTTCCTGAAGCCCTGCAGCTAGCGGGCGAGTGTGTGCGGCACCGCCCAGGCTCCCTGCGCAGCGCATTGCAGGCCCGCCCGTCATCTCCTCCAACCTTCACCCTCCTCTGCACAGTGCACGCCACT-ACCCAATTTCCAGGTGGCTAAA-TGGGGTCCTGAGGGGCTCCCCCAA--ACCCAGGGTCCGAGCCAAGCGTC-CCTCTTCCAGGAACTGCGGTCCCTCCCCTCCCCCGGGACTGAGGCAGCATCTTCAATATCCTTCAAGAAAGACAGACATTCTCTCTTGGGAGTGT-CCTTCCCTCCTGCCTCGTCCACGGTCCAACGTCCAGGACACCACCCG-TTATTCTACACCAT------------------------------------GACTTCCTG---GGCTTGGTCTTCATAACATTTGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56168664 703 + 60714840 agaaa--------cccgctgcaccgtctgcacctccagggctcagtgaccccacgt-gcctgatgccatccctactggacggtgcagatacagtgcgtttccTGGGCGTGAAGCTGTGGTAGACATCGCTGCTCTCTGCCCTCTGCAGATCTAGGCAGAGACCAACCACCCGCAAGAAGAGGAAGGGAGACCTTCCCTCCCTGACCTCCTTCTGGGTTCCCA-CCAGAGTGCAAGGATC-CCCATGTCTGATTTTATCTGCCCTTGCGGCAACCCTC-TGACGGGGATGTAAC------------------CCGCCCTTCTGTGGG-AAGAATCCTATTCCCAATGTGCTCCTGTTTCCTGAAGCCCTGCAGCTAGCGGGCGAGTGTGTGCGGCACCGCCCAGGCTCCCTGCGCAGCGCATTGCGGG-CCGCCGGTCATCTCCTCCAACATTCACCCTCCTCTGCACAGTGCACGCCACT-ACCCAATTCCCAGGTGGCTAAA-TGGGATCCTGAGGGGCTCCCCCAA--ACCCAGGGTCCGAGCCAAGCGGC-CCTCTTCCAGGAACAGC-TTCCCCCCCCTCCCCCGCTGCTGAGGCAGCATCTTCAATATCCTTCAAGAAAGGCAGATATTCTCTCTTGGAG-TGT-CCTTCCCT-CTGCCGCCTCCACGGTCCAAGGTCCAGGCCACCACCCG-TTATTCTACACCAT------------------------------------GACTTCCTG---GGCTTGGTCTTCATAACATTTGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102913368 699 - 106955855 AGAAG--------CTGGCTgcactgtctgcatctcgagggctcagtgaccccatgt-gcctgatgccatccctactggacggtgcagatacagcgcgtttccTGGGCATGAAGCTGTGGTAGACATGGCTGCTCTCTGCCCTCTGCGGATCTAGGCAGAGACCAACCACCCGCAAGAAGAGGAAGGGAGACCTTCCCTCCCTGACCTCCTTCTGGGTTCCCA-CCAGAGGGCAAGAATC-CCCATGTCTGATTTTATCTGCCCTCGCGGCAACCCTC-TGACGGGGATGTAAC------------------GCGCCCTCCTGTGGG-AAGAATCCAAGTCCCGATGTGCTCCTGTTTCCTGAAGCCCTGCAGCTAGCGGGCGAGTGTGTGCGGCACCGCCCAGGCTCCCTGCGCAGCGCATTGCACGTCCGCCCGTCATCTCCTCCAACATTCACCCTCCTCTGCACAGTGCACGCCACT-ACCCAATTCCCAGGTGGCTAAA-TGGGGTCCTGTGGGGCTCCCCCAA--ACCCAGGGTCCGAGCCAAGCATC-CCTTTTCCAGGAACAGC-GTCCCTCCCCTCTGCCGCTGCCGAGGCAGCATCTTCAATATCCTTCAAGAAAGGCAGACATTCTGTCTTGGAG-TGT-CCTTCCCTCATG------CCACGGTCCAAGGTCCAGGACACCACCCG-TTATTCTACACCAT------------------------------------GACTTCCTG---GGCTTGGTCTTCATAACATTTGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60172791 704 + 64156825 agaag--------cctgctgcactgtctgcatctcgagggctcagtgaccccatgt-gcctgatgccatccctactggatggtgcagatacagcgcgtttccTGGGCATGAAGCTATGGTAGACATCGCTGCTCTCTGCCTTCTGTGGATCTAGGCAGAGACCAACCAC---CAAGAAGAGGAAGGGAGACCTTCCCTCCCTGACCTCCTTCTGGGTTCCCA-CCAGAGTGCAAGAATCTCCTCTGTCTGATTTTATCTGCCCTCGCGGCAACCCCC-TGATGGGGATGTAAC------------------CCGCCCTCCTGTGGG-AAAAATCCAAGCCCCGATGTGCTCATGTTTCCTGAAGCCCTGCAGCTAGCGGGCGAGTGTGCGCGGCGCCGCCCAGGCTCCCTGCGCAGCGCATTCCGGGTCGGCCCGTCATCTCCTCGAACATTCACCCTCCTCTGCACAGTGCACGCCACT-ACCCAATTCACAGGTAACCAAA-TGGGGTCCTGCAGGGCTGCCCAAA--ACCCAGGGTCCGAGCCAAGCGTC-TCTCTTCCAGGAACAGC-GTCCCTCCCCTTCCCCGCTGCCTAGGTAGCATCTTCAATATCCTTCAAGAAAGGCAGACGTTCTCTCTTGGAG-TGTGCTTTCTCTCATGCCTCGTCCACGTTCCAAGGTCCAGGACACCACCCG-TTATTCTACACCAT------------------------------------GACTTCCTG---GGCTTGCTCTTCATAACATTTGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55272565 704 + 59248254 agaag--------cctgctgcactgtctgcatctcgagggctcagtgaccccatgt-gcctgatgccatccctactggatggtgcagatacagtgcgtttcctgggcatgaagctgtggtagacatcgctgCTCTCTGCCCTCTGTGGATCTAGGCAGAGACCAACCAC---CAAGAAGAGGAAGGGAGACCTTCCCTCCCTGACCTCCTTCTGGGTTCCCA-CCAGAGTGCAAGAATCTCCCCTGTCTGATTTTATCTGCCCTCGCGGCAACCCCC-TGATGGGGATGTAAC------------------CCGCCCTCCTGTGGG-AAGAATCCAAGCCCCGATGTGCTCCTGTTTCCTGAAGCCCTGCAGCTAGCGGGCGAGTGTGTGCGGCGCCGCCCAGGCTCCCTGCGCAGCGCATTCCGGGCCGGCCCGTCATCTCCTCGAACATTCACCCTCCTCTGCACAGTGCACGCCACT-ACCCAATTCACAGGTAACCAAA-TGGGGTCCTGCGGGGCTCCCCAAA--ACCCAGGGTCCGAGCCAAGCGTC-TCTCTTCCAGGAACAGC-GTCCCTCCCCTTCCCCGCTGCCTAGGTAGCATCTTCAATATCCTTCAAGAAAGGCAGACGTTCTCTCTTGGAG-TGTGCTTTCTCTCATGCCTCGTCCACGTTCCAAGGTCCAGGACACCACCCG-TTATTCTACACCAT------------------------------------GACTTCCTG---GGCTTGCTCTTCATAACATTTGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47362582 704 + 51301725 AGAAG--------CCTGCTGCACTGTCTGCATCTCGAGGGCTCAGTGACCCCATGT-GCCTGATGCCTTCCCTACTGGACGGTGCAGATACAGCGCGTTTCCTGGGCATGAAGCTGTGGTAGACATCGCTGCTCTCTGCCCTCTGTGGATCTAGGCAGAGACCAACCAc---caagaagagaaagggagactTTCCCTCCCTGACCTCCTTCTGGGTTCCCA-CCAGAGTGCAAGAATC-CCCGTGTCTGATTTTATCTGCCCTCGCGGCAACCCCC-TGATGGGGATGTAAC------------------CCGCCCTCCTGTGGG-AAGAATCCAAGCCCCGATGTGCTCCTGTTTCCTGAAGCCCTGCAGCTAGCGGGCGAGTGTGTGCGGCGCCGCCCAGGCTCCCTGCGCAGCGCATTGCGGGCCGGCCTGTCGTCTCCTTGAACATTCACCCTCCTCTGCACAGTGCACGCCACT-ACCCAATTCGCAGGTAACCAAA-TGGGGTCCTGCGGGGCTCCCCAAA--ACCCAGGGTCTGAACCAAGCGTT-TCTCTTCCAGGAACAgc-gtccctcccctcccccgctgCCTAGGTAGCCTCTTCAATATCCTTCAAGAAAGGCAGACGTTCTTTCTTGGAG-TGTGCTCTCTTTCATGCCTCGTCCACGTTCCAAGGTCCAGGACACCACCCGTTTATTCTACACCAT------------------------------------GACTTCCTG---GGCTTGGTCTTTATAACATTTGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47068754 703 + 50890351 agaag--------cctgctgcactgtctgcatcttgagggctcagtgaccccatgt-gcctgatgccatccctactggacggtgcagatacagcgcgtttccTGGTCATGAAGCTGTGGTAGACATTGCTGCTCTCTGCCCTTTGTGGATCTAGGCAGAGACCAACCAC---CAAGAAGAGAAAGGGAGACTTTCTCTCCCTGACCTCCTTCTGGGTTCCCA-CCAGAGTGCAAGAATC-CTTGTGTCTGATTTTATCTGCCCTCGCGGCAACCCCC-TGATGGGGATGTAAC------------------CCGCCCTCCTGTGGG-AAGAATCCAGGCCCCGATGTGCTCCTGTTTCCTGAAGCCCTGCAGCTAGCGGGCGAGTGTGTGCGGCGCCGCCCAGGCTCCCTGCGCAGCGCATTGCGGGCCGGCCCGTCATCTCCTCGAACATTCACCCTCCTCTGCACAGTGCACGCCACT-ACCCAATTTACAGGTGACCAAA-TGGGGTCCTGCGGGGCTCCCCCAA--ACCCAGGGTCCAAGCCAAGCGTC-TCTCTTCCAGGAACAGC-GTCCCTCCCCTCCCCCGCTGCCTAGGTAGCATCTTCAATATCCTTCAAGAAAGGCGGACGTTCTCTCTTGGAG-TGTGCTTTCTCTCATGCCTCGTCCATGTTCCAAGGTCCAGGACACCACCCG-TTATTCTACACCAT------------------------------------GACTTCCTG---GGCTTGCTCTTCATAACATTTGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45590800 592 + 49145316 AGAAG--------CTagctgcactgtctgcatctctagggcttagtgaccacatgt-gcctaatgccatccctactggacagtgcagatacagcgtgtttccttggcgtgaagctgtgttagacatcgctgCTCTCTGCCCTCTGCAGATCTAGGCAGAGACCAGCCACCCATAAGAAAAGGAAAGCAGCCCTTCCCTCCCTGACCTCCTTCTGGGTTCCCA-CCAGAATGCAAGAATC-CCCAGGTCTG-----------------------------------------AC------------------CCGCCCTCCCGTGGG-AAGAATCCAAGGCCCACTGTGCTGCTGTTTCCTGAAGGCCTGCAGCTAGCGGGCGAGTGTGTGCGGCACTGGCTGGGCTCCCTGCTCAGGGCTTC---------TCCGTCATCTC---GATCATCCACCCTCCTCTGCACAGTGCACACCA-T-ACCCACTTCACGGGCGACGAAA-TGGGGTCCTGCAGGGCTCTCCCAA--ACCCAGGGTCC--------------CTCTTCCAGGAACAGCGGCCCCTCCCCTCCCCTG------------------------------------------------TCTTGGAG-TGT-CCTTCCCTCACGCCTCCTCCAGGGTCCAAGATCCAGCACACGACGCT-TTATTCTACGCCAT------------------------------------GACTGCCTG---GGCTTGGTCTTTATAACATTTGCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19759166 587 - 122678785 aaaagtgagatcttcagctgtgctggccacttttcctgggctcagtggccacaactgggctaatgactTCT---------------------------------GGCGGGA---TGTGTGGGATGGTCCTGCCCTCCACCCTC---------------------------------------------------CCCTCGGTTGCTTGCTTCTGGATGCCCATCCCACGTGCAAACATC-CCCATTGCTGAGACTCCTGTTTCTCACAGCAGCCCCCATGGAGGGGGTGGAACTCTTTCTGTTTCTCACAGCCCCCCTTCTGTGAGCAACAGGCCGAGACTCCACGTCCTCCTGTGGCCTGATGCCAATCATTCCGCA-----------CCAGCATGGCCCTGG------------------------------------------------------ACTCTGCGCA---CGCACCACTCATCCATTTCACTCGTAGCCAAACCGAGGTGCTGCTGGGCTCCTCAGAGTGCACAGGGTTGAGCCCCCATGTCGCCTCTTCT--GGACGGTGCTCCCTCCCTCCCGCTGCCTTAGAGGCTGAGTCCTCAA------------------------------------TGT-CTCCCCTCAATGCCTTGTCCTTGATGCATGGTGCAGGACCCTACCTG-CTGTCatatataataaatataaatatacattttaaatCTAGTGTTTTAGgggatccctgggtggctcagtggtt-taacgcctgcc i canFam3.chr1 C 0 I 84 a score=132768.000000 s hg38.chr19_GL949747v2_alt 339320 53 + 729520 ACCattt---aaaattacatatgtattatatatgtgcaatattacagt-ttttatat s panTro4.chr19 59286934 53 + 63644993 ACCATTT---AAAATTACATATGTATTATATATGTGAAATAGTATACT-Ttttatat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56169367 53 + 60714840 ACAATTC---AAAATTACATATGTATTGTATATGTGCAATATTATACT-TTTTATAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102914067 53 - 106955855 ACCATTT---AAAATTACATATGTATTACATATGTGCAATATTATACT-TTTTATAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60173495 53 + 64156825 ACCATTT---AAAATTGCATATGTATTATACATGTGCAATAGTATACA-TTTTATAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55273269 53 + 59248254 ACCATTT---AAAATTGCATATGTATTATACATGTGCAATAGTATACA-TTTTATAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47363286 53 + 51301725 ACCATTT---AAAAttgcatatgtattatatatgtgc-atattatacatttttatat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47069457 53 + 50890351 ACCATTT---AAAATTGCATATGTATTATACATGTGCAATAGTATACA-TTTTATAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45591392 55 + 49145316 ACCATTTAAAAAAATGACATATGTACTATGTACGTGCAATATTACAC--TTTTATAA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19759753 84 - 122678785 I a score=1420502.000000 s hg38.chr19_GL949747v2_alt 339373 571 + 729520 tatttatagttatatgtatcatgtattatgcaaatgtataatatataacaaatatat-ttttaattatgtaatcttgacatatacatataatttaatgtatataatgttaattgtatatgatttataac-ttataatatatgttacatat----------attcactataatatataatgtataatttatatttgatataaacctatgattaaatataaaatattttttctattatagttatacataatgtatacataatagataatatatttacattaatacctat-atttatttattaactataacact---tgaaatttattatactatatattgtaaat---atatctttcatataatatataa---tatacactatagtcatatgtagtgatacactaacatgttt-tattata-taattatcttccttatatatataatatatatataatatatatatattatgatgtaaacata---tataatataatttaaattataGGTCTGAAATTCTACATTG--------------------------------------------CAAATCATATAT------TTTTATCTGTATATGCATGTATGGGAATCAGTGCATTTCTATTGCTCATTCTAACTATTTCT s panTro4.chr19 59286987 528 + 63644993 tatttatagttatacgtatcatgtattatgcaaatgtataatatataacta-tatatattttaattatgtaatcttgacaca--cataaaatttaatgtat-----gttaattgtatatgatttataac-ttata-----tgttgcatat----------attcactataatatataatgtataatttatattaggtataaacctataattaaatataaaatattttttctattatagttatacataatatatacataatagataatatatttacattaatacctat-atttatttattaactataacact---tgaaatttattatactatatattgtaaat---atatctttcatataatata----------cattatagtcatatgtagtgatacactaacatgttt-tattata-taattatcttccttatatacataatatat--------------------gatgtaaacata---tataataTAATTTAAATTATAGGTCTGAAATTCTACATTG--------------------------------------------CAAATCATATAT------TTTTATCTGTATATGCATGTATGGGAATCAGTGCATTTCTATTGCTCATTCTA----TTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56169420 538 + 60714840 TATTTACAGTTACATGTATCATGTATTATGCAAATGTATA--ATATAACAAATACAT-TTTTAATTATGTAATCTTGACATATGCATATAATTTAATGTAT-----GTTAATCGTATATGATTTATAAC-TTATA-----TGTTACATAC----------ATTCACtataatatataatgtataatttatattcgatataaacctataattaaatataaaatattttttCTATtatagttatacataatgtatacataatagataatatatttacattaatacctat-atttatttattaactataacact---tgaaat---ttatactatatattgtaaatataatatctttcatataatatataa---tatacattatagtcatatgtaGTGATACACTAACATGTTT-TATTATA-TAATTATCTTCCTTATATACATAATATAT--------------------GATGTAAACATA---TATAATATAA-TTACATTATAGGTCTGAAATTCTACATTG--------------------------------------------CAAATCATATAT------TTTTATCTGTATATGCGTGTATGGGAATCAGTGCATTTCTATTGCTCATTCTAACTATTTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102914120 542 - 106955855 TATTTATAGTTATACGTATCATGTATTATGCACATGTATAATATGTAACAAATATATATTTTAATTATGTAATCTTGACACATACATATAATTTAATGTAT---ATGTTAATTGTATATGATTTATAAC-TTATA-----TGTTACATAT----------ATTCACTATA----ATAATGTATAATTTATATTAGATATAAGCCTATAATTAAATATAAAATATTTTTTCTACTATAGTTATACATAATGTAAACATAATAGATAACATATTTACATTAATACCTAT-ATTTATTTATTAAGTATAACACT---TGAAATTTATTATACTACATATTGTAAATATAATATCTTTCATATAATATATAA---TATACATTATAGTCATATGTAGTTATACATTAACATATTT-TATTATG-TAATTATCTTCCTTATATACGTAATATAT--------------------GATGTAAACATA---TTTAATATAATTTAAATTATAGATCTGAAA-TCTACATTG--------------------------------------------CAAATCATATGT------TTTTATCTGTACATGCATGTATTGGAATCAGTGCATTTCTATTGCTTATTCGAATTATTTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60173548 542 + 64156825 TATTTATAGCCATATGTATCATGTATTATGTAAATGtataatatataacaaatatatttttaaattatGTAATCTTGACATA--GACATAATTTAATGTATATAGTGTTAATTGTGTATGATTTATAATAACTTA-----TGTTACATATATTCACTATAATTCACTATAATATATAATGTACAATTTATATTAAATCTAAACCTGtaattaaatataaaata-tttttctattataattatatataatGTATACATAATAGATAGTATGTTTACATTAATACCTAT-ATTT--------ATTATAACAGT---TGAAAT---TTATACTATATA--GTAAAT----TATCTTTCATATAATATATAA---TATACATTATAGTCATATGTAGTGATGCACTAACATATTCTTATTATA-TAATTATCTTCCTTATATACATAATATGT--------------------GACGGaaaaata---tttattataatttaaattataGATCTGAAATTCTCCATTG--------------------------------------------CAAATCATATAT------TTTTATCTGTATATGCATGTATGAGAATCTGTGCATTTCTATCACTCATTCTAATTGTTTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55273322 551 + 59248254 TATTTATAGCCATATGTATCATGTATTATGTAAATGTATAATATATAACAAATATATTTTTAAATTATGTAATCTTGACATA--GACATAATTTAATGTATATAGTGTTAATTGTGTATGATTTATAATAACTTA-----TGTTACATATATTCACTATAATTCACTATAATATATAATGTACAATTTATATTAAATCTAAACCTGTAATTAAATATAAAATATTTTTTCTATTATAGTTATATATAATGTATACATAATAGATAGTATGTTTACATTAATACCTAT-ATTTATTTATTAATTATAACAGT---TGAAAT---TTATACTATATA--GTAAAT----TATCTTTCATATAATATATAA---TATACATTATAGTCATATGTAGTGATGCACTAACATATTCTTATTATA-TAATTATCTTCCTTATATACATAATATGT--------------------GACGGAAAAATA---TTTATTATAATTTAAATTATAGATCTGAAATTCTCCATTG--------------------------------------------CAAATCATATAT------TTTTATCTGTATATGCATGTATGAGAATCTGTGCATTTCTATCACTCATTCTAATTGTTTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47363339 542 + 51301725 tatttatagctatatgtatcatgtattatgc-aatgtataatatataacaaatatatttttaaattatgtaatctTGACATA--GACATAATTTAATGtatatagtgttaattgtatatgatttataac-ttata-----tgttacatat----------attcactataatatataatgtataatttatattaaatctaaacctgtaattaaatataaaatattttttctattatagttatatataatgtatacataatagatagtatgtttacattaatacctat-atttatttattaattataacagT---TGAAATGtattatactatata--gtaaat----tatctttcatatactatataa---tatacattatagtcatatgtagtgatacactaacatattcttattata-taattatcttccttacataaataatatat--------------------gatggaaaaata---tttattataatttaaattatagatCTGAAATTCTCcattg--------------------------------------------caaatcatatat------ttttatctgtatatGCATGTATGAGAATCTGTGCATTTCTATCGCTCATTCTAATTGTTTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47069510 534 + 50890351 TATTTACAGCTATATGTATCATGTATTATGTAAATGTATAATATATAACAAATATATTTTTAAATTATGTAATCTTGACATA--GACATAATTTAATGTATATAGTGTTAATTGTA-------TATAATAACTTA-----TGTTACATAT----------ATTCACTATAATATATAATGTATAATTTATATTAAATCTAAACGTGTAATTAAATATAAAATATTTTTTCTATTACAGTTATATATAATGTATACATAATAGATAGTATGTTTACATTAATACCTAT-ATTTATTTATTAATTATAACAGT---TGAAATTTATTATACTATATA--GTAAAT----TATGTTTCATATAATATATAA---TATACATTATAGTCATATGTAGTGATACACTAACATATTC---TTATA-TAATTATCTTCCTTATATACATAATATAT--------------------GATGGAAAAGTA---TTTATTATAATTTAAATTATAGATCTGAAATTCTCCATTG--------------------------------------------CAAATCATATAT------TTTTATCTGTATATGCATGTATGAGAATCTGTGCATTTCTATCGCTCATTCTAATTGTTTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45591447 528 + 49145316 TATTTAAGGTtatatgtatcatgtattatgcaaatgtataatatataacaaatatat-ttataattatgtaatcttgacacgcacatacaatgtaatgtatataatgttaaatgtatatgatttat-ac-ttata-----tgttacatat----------attcactataatatataatgtgtaatttatatTGCTGATAAACCtataattaactataaaatg-tttttctattataattatacataat----agataata-----tatatttaCCTGAATATATATGATTTATTCATTAATTATAACACT---TGAAATTTATTACACtatatattgtaaat---atatatttcatataatatataa----------tataatcatatatagtgatacactaacattttt--attata-taattatgtttcttatatatgtaatatat--------------------gatgtaaacata---tttaatataATTTAAATTATAGATCTGAAATTTTACATTG--------------------------------------------CAAATCATATGT------TTTTATTTGTGTAGGCATATAAAGGCATATGTGCCTTTCTATTACTCATTCTAACTATTTAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19759837 522 - 122678785 tgtctctgcctctatctctgaataaataactaaataaaaaatctttaaaaaaTAAATTTTGTGTTT---TAACtt--atata--tgtataatttaatttagataattttaattatatataatgtaaaat----ca-----tttta-atgt----------ataaactata--------tatCTCAATTATATCT------------CAATCATACATA-------TTTACTATTATA-----------------------AGGTA-CGTATTTCTATTGACATTTAC-ATGT----ATAAATGATAGCAATCCATGACATAGAATATAATGTATG----ACAT-----------TATATAATATGTAACACTGCACAGTATATTCATATGTAATAATATATTAATGTATTT-TCTTACATTAATTATATTAGTTGTATATTTAATACAT--------------------AATGTAAACATACATTCTAATAC-ATTTAAATTATAGATCTGAAATTTTATATTGTAAGTTAATGTTTATATGGGTTAACTATATAGATACATTCTATTTAAATtatatatataaagttttatatatatacatatatatataAA------CATTTCTAGTTCTCATTCTAGtttttttt i canFam3.chr1 I 84 I 812 a score=532247.000000 s hg38.chr19_GL949747v2_alt 339944 186 + 729520 CCCCATTGAAGTTCACAAGACGGGAGGCCATTTCTCCTCATTCTTGGTGCATCAAATCCGGAGGCTTCAGTGCCTGGCACAGTCCCTGTGAGGACAAAATACTTCCTCAGTATTAATAGGAGCATCCCTCCTTTGGGGTTTTCTAATCAgcactgatgtcagcgccgtgtgtacctgaactcaagt s panTro4.chr19 59287515 186 + 63644993 CCCCATTGAAGTTCACAAGACGGGAGGCCATTTCTCCTCATTCATGGTGCATCAAACCCAGAGACTTCAGTGCCTGGCACAGTCCCTGTGAGGACAAAATATTTCTTCAGTATTAATAGGAGCATCCCTCCTTTGGGGTTTTCTAATCAgcactgatgtcagcgccgtgtgtacccgaactcaagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56169958 186 + 60714840 CCCCATTGAAGTTCACGAGACGGGAGGCCATTTCTCCTCATTCACGGTGCATCAAACCCAGAGGCTTCAGTGCCTGGCATAGTCCCTGTGAGGACAAAATACTTCCTCAGTATTCATAGGAGCATCCCTCCTTTGGGGTTTTCTAATCAgcactgatgtcagtgccgtgtgtacctgaactcaagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102914662 186 - 106955855 CCCCATTGAAGTTCACAAGACGGAAGGCCATTTCTCCTCATTCATGGTGCATCAAACCCAGAGGCTTCAGTGCCCGGCACAGTCCCTGTGAGGACAAAATACTTCCTCAGTATTAATAGGAGCATCCCTCCTTTGGGGTTTTCTAATCAgcactgatggcagcgccgtgtgtacctgaactcacgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60174090 186 + 64156825 CCCCATTGAAGTTCACAAGGTGGGAGGCCATTTCTCCTCATTCACGGTGCATCACACCCAGAGCCTTCAGTGCCTGTCACAGTCCCTGTGAGGACAAAATACTTCCTCAGTATtaatagcagcacccctcatttggggttttctaatcagcactgatgtcagcgccgtgtgtacttgaactcaagt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55273873 186 + 59248254 CCCCATTGAAGTTCACAAGGTGGAAGGCCATTGCTCCTCATTCACGGTGCATCACACCCAGAGCCTTCAGTGCCTGTCACAGTCCCTGTGAGGACAAAATACTTCCTCAGTATtaatagcagcacccctcatttggggttttctaatcagcactgatgtcagcgccgtgtgtacttgaactcaagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47363881 186 + 51301725 CCCCATTGAAGTTCACAAGGTGGAAGGCCATTTCTCCTCATTCACAGTGCATCACACCCAGAGCCTTCAGTGGCTGGCACAGTCCCTTTGGGGACAAAATACTTCCTCAGTATTAATAGCAGCGCCCCTCCTTTGGGGTTTTCTAATCAGCACTGATGTCAGTGCCGTGTCTACCTGAACTCAAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47070044 186 + 50890351 CCCCATTGAAGTTCACAAGGTGAAAGGCCATTTCTCCTCATTCACGGTGCATCACACCCAGAGCCTTCAATGCCTGGCACAGTCCCTGTGAGGACAAAATAATTCCTCAGTATTAATAGCAGCACCCCTCCTTTGGGGTTTTCTAATCAgcactgatgtcagcgccgtgggtacctgaactcaagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45591975 167 + 49145316 CATTATTGAGGTTCACAAGGCGGGATGCCATTTCTTCTCATTCATGGTGCATCAAACCCGGAGGCTTCCGTGCCTGGCACAGTCCCTGTGAGTACAAaatacttca-------------------ccctccttgggagttttctaatcagcactgatggaagcactgtgtgtacctgaactcaagt i calJac3.chr22 C 0 I 293 e canFam3.chr1 19760359 812 - 122678785 I a score=1963409.000000 s hg38.chr19_GL949747v2_alt 340130 705 + 729520 ctgccctaaacgattctaccaggacagctcttctattgcctctgtttcacatga-----------------ggaatttgggacacaggaggtttgggtgagtcaccgtcaggcatagagcc------aggaggtggcagaaccaccgggatttgaaccatgaacccagcaatctggctgc-aggagggtctgtcctcgtgacctttatATGTCACTGCATG-AAGGTgagagaagagagaaggaaggagaagaagaga--gggagagaaacagagGCAAGATATTCCCGCAGACAGAAGGCTAATAAAAACCAGACACTGGACTTGAACCAGGTCTGCGGGACTCAGGAGCATGTCCCG-----CTGTGCCCCAGCAGCCCAGGAGCCTCTGAGGGGGTCCGGATGGAGCACGGCATCGCTCCTCCCACCTCCCCATGTGGCTTCAGCCCCTGGTCCCACCTGCCTGAGCTCACAGCCCGAGCCTCACAGGCAGTCACCGGGTCTAGGTCCAAGGACG--TACTCTGGGGATAGAAACCCAGGTGGGGAAGGGGCCGCGAATGGCTTATGACCCCGTGTCCTCCCCTGGGAGTTTCTGGTCACAGATCACAGGGGGAGATGGACAACTTGAGACCCAGGGACTTG-------------------------------------------------GGGCAGCTTCAATCCCAT--CACAGAGT-CCA-GGGCAGAGCCAGATGGAAGGGAAGCCTCATGGCTTCATCCTGGTCACCGTTCACA-GCTACGTCCC s panTro4.chr19 59287701 707 + 63644993 ctgccctaaaggattctaccaggacagctcttctattgcctctgtttcacatga-----------------ggaatttgggacacaggaggtttggatgagtcaccgtcaggcatagagcc------aggaggtggcagaaccaccgggatttgaaccatgaacccagcaatctggctgc-aggagggtctgtcctcgtgacctttatATGTCACTGCATG-AAGGTgagagaagagagagggaaggagaagaagaga--gggagagaaacagagGCAAGATATTCCCGCAGACAGAAGGCTAATAAAAACCAGACACTGGACTTGAACCAGGTCTGCGGGACTCAGGAGCATGTCCCG-----CTGTGCCCTGGCAGCCCAGGAGCCTCTGAGGGGGTCCGGATGGAGCACGGCATCGCTCCTCCCACCTCCCCATGTGGCTTCAGCCCCTGGTCCCACCTGCCTGAGCTCACAGCCCGAGCCTCACAGGCAGGCACTGGGTCTAGGTCCAAGGACGACTACTCTGGTGATAGAAACCCAGGTAGGGAAGGGTCCGCGGATGGCTTATGACCCCGTGCCCTCCCCTGGGAGGTTCTGGTCACAGATCACAGGGGGAGATGGACCACTTGAGACCCAGGGACTTG-------------------------------------------------GGGCCGCTTCTCTCCCAT--CACAGAGT-CCA-GGGCAGAGCCAGGTGGAAGGGAAGCCTCATGGCTTCATCCTGGTCACCGTTCACA-GCTACGTCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56170144 694 + 60714840 ctcccctaaacgattctaccaggacagctcttttattgcctctgtttcacagga-----------------ggaatttgggacacaggaggtttgggtgaatcaccatcaggcatagagct------gggaggtgacagaaccaccgggatttgaaccATGAACCCA-----------GT-AGAAGGGTCTGTCCTCGCCACCTTTTTATGTCACTGCATG-AAGATgagagaggagagaggaaaggagaagaagaga--gggagagaaacagagGCAAGATATTCCCGCAGACGGAAGGCTAATAAAAACCAGACACTGGACTTGAACCAGGTCTGCGGGACTCAGGAGCATGTCCCG-----CTGTGCCCCAGCAGCCCAGGAGCCTCTGAGGGGGTCCGGATGGAGCATGGCATCGCTCCTCCCGCCTCCCCATGTGGCTTCAGCCCCTGGTCCCACCTGCCTGAGCTCACAGCCCGAGCCTCACAGGCAGGCACTGGGTCTAGGTCCAAGGACG--TACTCTGGTGATGGAAACCCAGGTGGGGAAGGGTCCGCGGATGGCTTATGACCCCGTGTCCTCCCCTGGGAGGTTCTGGCCACAGATCACAGGGGGAGATGGACAACTTGAGACCCAGGGTCTTG-------------------------------------------------GGGCAGCTTCACTCCCAT--CACAGAGT-CCA-GGGCAGAGCCAGACGGAAGGGAAGCCTCAAGGCTTCATCCTGGTCACCGTTCACA-GCTACATCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102914848 709 - 106955855 ctgccctaaacgattctaccaggacagctcttttattgcgtctgtttcacatga-----------------ggaatttgggacacaggaggtttgggtgagtcaccgtcaggcacagagcc------aggaagtggcagaaccaccgggatttgaaccatgaacccagcaatctggctgc-aggagggtctgtcctcGCCACCTTTACATGTCACTGCATG-Aagatgagagaggagagagagaaggagaagacgaga--gggagagaaacagagGCAAGATATTCCCGCAGACGGAAGGCTGATAAAAACCAGACACTGGACTTGAACCAGGTCTGCGGGACTCAGGGGCATGTCCCG-----CTGTGCCCCGGCAGCCCAGGAGCCTCTGAGGGGGTCCGGATGGAGCACGGCATCGCTCCTCCCACCTCCCCATGTGGCTTCAGCCCCTGCTCCCACCTGCCTGAGCTCACAGCCCGAGCCTCACAGGCAGTCACTGGGTCTAGGTCCAAGGACGACTACTCTGGTGATGGAAACCCAGGTGGGGAAGGGTCCGCGGATGGCTTATGACCCCGTGTCCTCCCCTGGGAGGTTCTGGTCACAGATCACAGGGAGagatggacaactcgagacccagggacttg-------------------------------------------------gggcagcttcactcccatcacacagagt-cca-gggcagagccagatggaagggaagcctcatggcttcatcctgctcaccgttcaca-gctacATCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60174276 712 + 64156825 ctcccctaaacgattctaccggggcagctattttactgcctatgtttcacatga-----------------ggaatttgggacacaggaggtttgggtgagtcaccatcaggcatggagcc-----gggggggtggcagaaccaccgggatttgaaccatgaacccagcaatcgggctgc-aggagggtctgtcctcgtaacctttatATGTCACTGCATGAAAGATgagagaggagagagggaaggagaaggagaga--gagagagaAagagagggtagatattcccgcagacagaaggctaataaaaaccagacactggacttgaaccaggtcagctggactcaggagcacgtcccatccctctgtgccccggcagcccAGGAGCCTCTGAGGGGGTCCAGATGGAGCACAGCATGGCTCCTCCCACCTCCCTATGTGGCTTCAGCCCCTGGTCCCGCCTGCCTGAGCTCACAGCCCGAGCCTCACAGGCCGTCACTGGGT----GACCAAGGACGACCACTCTGGTGATGGAAACCCAGGTGAAGAAGGGCTCGCAGATGTCTTACGACCCCGTGTCCTCCCCTGGGAGGTTCTAGTTACAGATCACAGGGGGAGATGGACAACTTGAGACCCAGGGACTTG-------------------------------------------------CGGCAGCTTCTCTCCCAT--CACAGAGTCCCG-GGGCAGAGCCAGATGGGAGGGAAGCCTCATGGCTTCATCCTGGTCACCGTTCACAGGCTATGTCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55274059 753 + 59248254 ctcccctaaacgattctaccggggcagctattttactgcctatgtttcacatga-----------------ggaatttgggacacaggaggtttgggtgagtcaccctcaggcatggagcc------ggggggtggcagaaccaccgggttttgaaccatgaacccagccatctggctgc-aggagggtctgtcctcgtaacctttatatgtcactgCATgaaagatgagagaggagagagggaaggagaaggagaga--gagagagaAagagagggtagatattcccacagacagaaggctaataaaaaccagacactggacttgaaccaggtcagctggactcaggagcacgtcccatccctctgtgccccggcagcccAGGAGCCTCTGAGGGGGTCCAGATGGAGCACAGCATGGCTCCTCCCACCTCCCCATGTGGCTTCAGCCCCTGGTCCCACCTGCCTGAGCTCACAGCCTGAGCCTCACAGGCCGTCACTGGGT----GACCAAGGACGACCACTCTGGTGATGGAAACCCAGGTGAAGAAGGGCTCGCAGATGTCTTACGACCCCGTGTCCTCCCCTGGGAGGTTCTAGTCACAGATCACAGGGGGAGATGGACAACTTGAGACCCAGGGACTTGGGGCAGCTTCACTTCAATCACACAGAGTCCAGGGCC-----AGAGCCA-GGGCAGCTTCTCTCCCAT--CACAGAGT-CCA-GGGCAGAGCCAGATGGAAGGGAAGCCTCATGGCTTCATCCTGGTCACCGTTCACAGGCTATGTCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47364067 774 + 51301725 CTCCCCTAAACGATTCTACCAGGACAGTTATTTTACTGCCTATGTTTcacatgacacaggacacaggacacaggacacaggacacaggacGTTTGGGTGAGTCACCATCAGGCATGGAGCCggggggggggggTGGCAGAACCACCGGGATTTGAACCATGAACCCAGCAATCTGGCTGC-AGGGGGTTCTGTCCTCGTAACCTTTATATGTCACTGCATGAAagatgagagaggagagagggaaggagagggagaga--gagagagaaacagagggtaGATATTCCCG-AGAAAGAAGGCTAATAAAAACCAGATACAGGACTTAAACCAGGTCAGCTGGACTCAGGAGCACGTCCTG-----CTGTGCCCTGGCAGCCCAGGAGCCTCTGAGGGGGTCCGGATGGAGCATAGCAtggctcctcccacctccccatgtgGCTTCAGCCCCTGGTCTCACCTGCCTGAGCTCACAGCCCGAGCCTCACAGGCCGTCACTGGGTCTAGGTCCGAGGACGACCACTCTGGGGATGGAAACCCAGGTGGAGAAGGGTCCGTGGATGTCTTATGACCCCGTGTCCTCCCTTGGGAAGTTCCAGTCACAGATCAC-GGGGGAGATGGACAACTTGAGACCCAGGGACTTGGGGCAGCTTCATTCCCATCACACAGAGTCCA-----GGGGCAGAGCCAGGGGCAGCTTCTCTCCCAT--CACAGAGT-CCA-GGGCAGAGCCAGATGGAAGGGAAGCCTCATGGCTTCATCCTGGTCACCGTTCACAGGCTACGTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47070230 711 + 50890351 ctcccctaaacgattctaccgggacagctattttactgcctatgtttcacatga-----------------ggaatttgggacacaggaggtttgggtgagtcaccatcaggcatagagcc------gggaggtggcagcaccaccggaatttgaaccatgaacccagcaatctggctgc-aggagggtctgtcctcgtaacctttatATGTCACTGCATGAAAGGTgagagaggagagagggaaggagagggagagagggagagagagagagagggTAGATATTCCCGCAGACAGAAAGCCAATAAAAACCAGACACAGGACTTGAACCAGGTCAGCTGGACTCAGGAGCACGTCTTG-----CTGTGCCCCGGCAGCCCAGGAGCCTCTGAGGGGGTCCGGATGGAGCACAGCATGGCTCCTCTCACCTCCCCGTGTGGCTTCAGCCCCTGGTCACACCTGCCTGAGCTCACAGCCCGAGCGTCACAGGCCGTCACAGGGTCTAGGTCCAAGGACGACCACTCTGGTGATGGAAACCCAGGTGGAGAAGGGTCCGTGGATGTCTTATGACCCCGTGTCCTCCCTTGGGAGGTTCCAGTCACAGATCACATGGGGAGATGGACAACTTGAGACCCAGGGACTTG-------------------------------------------------GGGCAGCTTCTCTCCCAT--CACAGAGT-CCA-GGGCAGAGCCAGATGGAAGGGAAGCCTCATGGCTTCATCCTGGTCACCGTTCACAGGCTACGTCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45592435 683 + 49145316 ctcccctaaatgattctgcaaggacagctttttcactgcttatttttcacatga-----------------ggaatttgggacacag---gtttgtgtgagtcaccatcaggcacagagct------ggggggtggcagaagcaccaggacttgaaccatgaacccagcaatctggctgcaaggagggtccgtcatcgtaacctttatatgtcactgCATGAAAGATGAGAGACGAGAGAGGGAAGGAGA----------GGTAGACAAGGAGAGGGAAGACATTCCTGCAGACAGAGGGCTAATTAAAACCAGACACTGGACTTGAACCAGGTCTGCTGGGCTCAGGAGCATGTCCCA-----CTGCACCCTGGCAGCCCAGGAGCCTCTGAGGGGGTCTGGATGGAGCACAGCATCACTCCTCCCACCTCC--------------CACATGGTCCCACCTGCCTGAGCTCAGAGCCCGAGCCTCACAGACTGTCACT-GGTCTAGGT-CAGGGACGACCACTCTAGCGAGGGAAACACAGGTAGGGAAGGGTCTGTGGATGGCTTCTGACCCCGTGTCCTCGCCTGGAAGGCTCTGATCACAGACCTCAGCGGGAGATAGGCAACTTGACACCCAGGGACCTG-------------------------------------------------GGGCAGCTT-ACTCCCAT--CACAGAGT-CCAGGGGCAGAGCCAGATGGAAGGGAAGCCTCATGACTTCATCCTGGTCACCGTGCACAGGCCATGTCCC i calJac3.chr22 I 293 C 0 e canFam3.chr1 19760359 812 - 122678785 I a score=1036356.000000 s hg38.chr19_GL949747v2_alt 340835 343 + 729520 CTCCCTGTGGAGCCCTC-CTCCTCTTAAGGGACCTTACTCCACCGTTCAGGCCTCCCCCGGAGATCACAGAGCCAACAGGAGCAGCCCCGTCCCTCTCCGGGTGTCCCAGGTTGGAAGGTGAGTTCTAAGTCCCTCCAT-----------CAGG-----TGCAGAGCGGGGTGAATGGTGAGGCCACGCCCACAAGGGGGCAGCGTGGAGCTCGGGCGAGCCCGGAAGTCTGGGGTGGGGCTGCCCGGGTGGGTGGCCCCTGCCCC----------------------------------TTCATGGCCTTGTGCCGTTAAGCACGAAACTTTAATTTATGTTTTGCATATTAGA------GAGGAGGAGGAGTTAGAGGATCAGACTAGTACCTCCCCC s panTro4.chr19 59288408 343 + 63644993 CTCCCTGTGGCGCCCTC-CTCCTCTTAAGGGACCTTACTCCACCGTTCAGGCCTCCCCCGGAGACCACAGAGCCAACAGGAGCAGCCCCGTCCCTGTCCGGGTGTCCCAGGTTGGAAGGTGAGTTCTAAGTCCCTCCAT-----------CAGG-----TGCAGAGCGGGGTGAATGGTGAGGCCACGCCCACAAGGGGGCAGCGTGGAGCTCGGGCGAGCCCGGAAGTCTGGGGTGGGGATGCCCGGGTGGGTGGCCCCTGCCCC----------------------------------TTCATAGCCTTGTGCCGTTAAGCAAGAAACTTTAATTTATGTTTTGCATATTAGA------GAGGAGGAGGAGTTAGAGGATCAGACTAGTACCTCCCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56170838 343 + 60714840 CTCCCTGTGGCGCCCTC-CTCCTCTTAAGGGACCTCACTCCACTGTTCAGGCCTCCCCCGGAGACCACAGAGCCAACAGGAGCATCCCCGTCCCTCTCCGGGTGTCCCAGGTTGGAAGGTGAGTTCTAAGTCCCTCCAT-----------CAGG-----TGCAGAGCGGGGTGAAAGGTGAGGCCACCCCCACAAGGGGGCAGCGTGGAGCTCGGTCAAGCCCGGAAGTCTGGGGTGGGGCTGCCCGGGTGGGTGGCCCCTGCCCC----------------------------------TTCATAGCCTTGTGCCTTTAAGCAAGAAACTTTAATTTATGTTTTGCATATTAGA------GAGGAGGAGGAGTTAGAAAATCAGACTAGTACCTCCCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102915557 338 - 106955855 CTCCCTGTGGCGCCCTC-CTCCTCTTAGGGGACCTCACTCCACTGTTCAGGCTTCCCCCGGAGACCACAGAGCCAATAGGAGCATCCCCGTCCCTCTCCGCGTGTCCCAGGTTGGAAGGTGAGTTCTAAGTCCCTCCAT-----------CAGG-----TGCAGAGCGGGGTGAAAGGTGAGGCCACGCCCACAAGGGGGCAGCCTGGAGCTCGGTCAAGCCCGGAAGTCTGGGGTGGGCCTGCCCGGGTGGGCGGCCCCTGCCCC----------------------------------TTCATAGCCTTGTGCCTTTAAGCAAGAAAC-----TTTATGTTTTGCATATTAGA------GAGGAGGAGGAGTTAAAGGATCAGACTAGTGCCTCCCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60174988 354 + 64156825 CTCCCTGTGGCACCCTC-CTCCTCTTACAGGACCTTACTCCACTGTTCAGGCCTCCCCCGGAGATCACAGAGCCAATAGGAGCATCACCGTCCCTCTCTGGGTGTCCCAGGTTGGAAGGTGAGTTCTAAGTCCCTCCAT-----------CAGG-----TGCAGAGAGGGGTGAATAGTGAGGCCATGCCCACAAGGGGGCagcatggagcttgggagaacccgaaagtctggggtggggctgcccgggtgggtggcccctgcccc-----------------------gcccctgccccttcatagctttgtgactttaagcaaggaacttTAGTTTATGTTTTGCATATTAGA------GAGGAGGAGGAGTTAGAGAATCAGACTAGTACCTCCCCC i rheMac3.chr19 C 0 I 8 s macFas5.chr19 55274812 361 + 59248254 CTCCCTGTGGCACCCTC-CTCCTCTTACAGGACCTTACTCCACTGTTCAGTCCTCCCCCGGAGATCACAGAGCCAATAGGAGCATCACCGTCCCTCTCTGGGTGTCCCAGGTTGGAAGGTGAGTTCTAAGTCCCTCCAT-----------CAGG-----TGCAGAGCGGGGTGAATGGTGAGGCCACGCCCACAAGGGGGCAGCGTGGAGCTCGGGAGACGCCGAAAGTCTGGGGTGGGGCTGCCCGGGTGGGTGgcccctgcccctg------------ccc----ctgcccctgcccctTCATAGCCTTGTGACTTTAAGCAAGAAACTTTAGTTTATGTTTTGCATATTAGA------GAGGAGGAGGAGTTAGAGAATCAGACTAGTACCTCCCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47364841 350 + 51301725 CTCCCTGTGGCACCCTC-CTCCTCTTACGGGACCTTACTCCACTGTTCAGGCCTCCCCCGGAGATCACAGAGCCAATAGGAGTATCACCATCCCTCTTCAGGTGTCCCAGGTTGG-AGGTGAGTTCTAAGTCCCTCCAT-----------CAGG-----TGCAGAGCGGGGTGAATGGTGAGGCCACGCCCACAAGGGGGCAGCGTGGAGCTCCGCAGAACCCGAAAGTCTAGGGTGGGGCTGCCCGGGTGGgtggcccctgcccc----------------------tgcccctgccccttcaTAGCCTTGTGACTTTAAGCAAGAAACTTTAGTTTATGTTTTGCATATT----------AGGAGGAGGAGTTAGAGAACCAGACTAGTACCTCCCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47070941 355 + 50890351 CTCCCTGTGGCACCCTC-CTCCTCTTACGGGACCTTACTCCACTGTTCAGGCCTCCCCCGGAGATCACAGAGCCAATAGGAGCATCACCGACCCTCTCCAGGTGTCCCAGGTTGGAAGGTGAGTTCTAAGTTCCTCCAT-----------CAGG-----TGCAGAGCGGGGTGAATGGTGAGGCCACGCCCAcaagggggcagcgtggagctccggagaacccgaaagtctggggtggggctgcccaggtgggtggcccctgcccc----------------------tgcccctgccccttcatagccttgtgactttaagcaagaaacttTAGTTTATGTTTTGCATATTAGA------GAGGAGGAGGAGTTAGAGAATCAGACTAGTACCTCCCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45593118 371 + 49145316 CTCCCTCTGGCATTGTC-CTCCTCTTAAGGGACCCTACTCCACTGTTCAGGCCTCCCCCGGAAATCACATAGCCAACAGGAGCCTCCTGGTCACTCTCTGGGTGTCCCAGGTTGGAAGGTGAGTTCTCAGTCACTCA-------------CAGG-----TGCAGAGCGGGGTGAATGATGAGGACATGCCCACAAGGGGGCAGCATGGAGCTCAGGCAAGCCCAGAAGTCTAGGGTGTGGCTGCCCGGGTGGGCGgcccctgccccggcccctgccccttccc----ctgccccttccccttcATAGCCTCCTGCCTTTGAGCAAGAAACTTGAATTTCTGCGTTGCATATTAGA------GAGGAGGAGGAGTTAGAGAATCAGCCTAGTACCTCCCCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19761171 325 - 122678785 CTCCTAGAGGGGCTCTCTCTTCCTCTACCTGACCTAATGCCACTGT-------------GGGG---ACATAACCATCAAGAGC--CCTGGTCTCTCCCGCAGAGTCTGAGTTTGGAAGATGAGCTGTTAGTTTCTCTGTGCCTCTAGACCCAGGTTCCTTGCAGAGC--TGCCAAGAGTAGGACCCTGCCCACAAGGGGGTGGC------------CACCACCTGAGGTCT------------------------GCCCCTCCCCC--------------CCTTGGGCTGGTTCCACCCCTTCAGAGCTTTGTGCCTTTGGGCATGAAACCTGCA---AGGCTTTGCACATTAGAGGAGTTGGGGGGGAGCTCTCAGAGG-TCGGA-GAGTGCCTCCCAC i canFam3.chr1 I 812 C 0 a score=561878.000000 s hg38.chr19_GL949747v2_alt 341178 197 + 729520 ATTAAGTGGTGCTTGCATTAAGTGCTTTCCACAGTTCCTGGCATGGAACAAGGTTGCAATCACTGTACCATTGCTGCTATGGTCTCTGTGAGCATTAGCGACCTCCCAGAGCTTGGTGGGTGTCGGTGCCTTCCCGTGGCCTCCCTAGACCTTGACTCCAAGCCCAGGGCAGAG--GGCTGGACCCGGAACAGCATCCG s panTro4.chr19 59288751 197 + 63644993 ACTAAGTGGCGCTTGCATTAAGTGCTTTCCACAGTTCCTGGCATGGAACAAGGTTGCAATCACGGTACCATTGTTGCTATGGTCTCTATGAGCATTAGCGACGTCCCAGAGCTTGGTGGGTGTCGGTCCCTTCCCGTGGCCTCCCTAGACCTTGACTCCAAGCCCAGGGAAGAG--GGCTGGACCCGGAACAGCATCCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171181 197 + 60714840 ATTAAGTGGCGCTTGCATTAAGTACTTTCCACAGTTCCTGGCATAGAACAAGGTTGCAATCACCGTACCATTGTTGCTATGGTCTCTACGAGCATTAGCGACCTCCCAGAGCTGAGCAGGTGACAGTGCCTTCCCGTGGCCTCCCTAGACCTTGACTCCAAGCCCAGGGCAGAG--GGCTGGACCCAGAGCAGCATCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102915895 197 - 106955855 ATTAAGTGGCGCTGGCATTAAGTGCATTCCACAGTTCCTGGCATGGAATGAGACTGCAATCACCATACCACTGTTGCTATGGTCTCTATGAGCATTAGCGACCTCCCAGAGCTGAGCGGGTGACAGTCCCTTCCCGTGGCCTCCCTAGACCTTGATTCCAAGCCCAGGGCAGAG--GGCTGGACCCGGAGCCGCATCCG i nomLeu3.chr10 C 0 I 370 s rheMac3.chr19 3831913 197 - 64156825 GGAGAGTGGTGCTTGCACTAAGTGTTTTCCACAGTTCCTGGCATGGAACGAGGTTACAATCACGGTACCATTGTTGCTATGGTCTCTAGGAGCATTAGCCACCTCCCAGAGCTGGGCGGGTGTCAGTCCCTTCCCGTGGCCTCCCTAAACCTTGACTCCAAGCCCAGGGCCGAG--GGCCGGACTCGGAGCTGCATCCC i rheMac3.chr19 n 8 C 0 s macFas5.chr19 55275173 197 + 59248254 GGAGAGTGGTGCTTGCACTAAGTGTTTTCCACAGTTCCTGGCATGGAACGAGGTTACAATCACGGTACCATTGTTGCTATGGTCTCTAGGAGCATTAGCCACCTCCCAGAGCTGGGCGGGTGTCAGTCCCTTCCCGTGGCCTCCCTAAACCTTGACTCCAAGCCCAGGGCCGAG--GGCTGGACTCGGAGCTGCATCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365191 197 + 51301725 GGAGAGTGGTGCTTGCATTAAGTGCTTTCCACAGTTCCTGGCATGGAACGAGGTTGCAATCACGGTACCATTGTTGCTATGGTCTCTAGGAGCATTAGCCACCTCCCAGAGCCGGGCGGGTGTCAGTTCCTTCCCGTGGCCTCCCTAGACCTTGACTCCAAGCCCAGGGCCGAG--GGCTGGACTCGGAGCTGCATCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47071296 197 + 50890351 GGAGAGTGGTGCTTGTATTAAGTGCGTTCCACAGTTCCTGGCATGGAACGAGGTTGCAATCACGGTACCATTGTTGCTTTGGTCTCTAGGAGCATTAGCCACCTCCCAGAGCCGGGCGGGTGTCAGTCCCTTCCCGTGGCCTCCCTAGACCTTGACTCCAAGCCCAGGGCCGAG--GGCTGGACTCGGAGCTGCATCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45593489 196 + 49145316 ATAGAGTGGGGTTTGTGTTCAGCGCTTTCCGGGGTGCCTGGCGTGGAGTGAGGTTGCAGTCGTGGTACCGTGGCTGCTCTGGTCTCTATGAGCATCAGCGACCTCCCAGAGCTGGGCA-GTGTCAGTCCCTTCCCACAGTCTCCCTAGTCCTTGACTCCAAACCCAGGGCCCAG--GGCTGGACCCGGAGCTGCATCCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19761496 154 - 122678785 ATCCTGTGCTACTAGCATTGACTGCTTT-CACAGCACTTGGCACAAG--------------------------------TAGT-----------TCAACCAGTTAGTGGTGCCCTGCAGGTGGCAGCCCCTCACTGTGGTCTCACCAGTCCCTAAC-CCAAGCCTAGGGGGGTGGAGGCTGGGCCTGCAGCCCGATTGC i canFam3.chr1 C 0 C 0 a score=8595.000000 s hg38.chr19_GL949747v2_alt 341375 2 + 729520 CA s panTro4.chr19 59288948 2 + 63644993 CA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171378 2 + 60714840 CA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102916462 2 - 106955855 CA i nomLeu3.chr10 I 370 C 0 s rheMac3.chr19 3832110 2 - 64156825 CA i rheMac3.chr19 C 0 I 3368 s macFas5.chr19 55275370 2 + 59248254 CA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365388 2 + 51301725 CA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47071493 2 + 50890351 CA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45593685 2 + 49145316 CA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19761650 2 - 122678785 CA i canFam3.chr1 C 0 C 0 a score=84689.000000 s hg38.chr19_GL949747v2_alt 341377 35 + 729520 GCACAGA----TTCCCCTGTAATCCCCTCCAGCTGAGGG s panTro4.chr19 59288950 35 + 63644993 GCACAGA----TCCCCCTGTAATCCCCTCCAGCTGAGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171380 35 + 60714840 GCACAGA----TCCCCCTGTAATCCCTTCCGGCTGAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102916464 35 - 106955855 GCACAGA----TCCCCCTGTAATCCCCTTCAGCTGAGGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60175350 35 + 64156825 GCACAGA----TCCCACTGTAATCCCTTCCGGCTGAGGA i rheMac3.chr19 I 8 C 0 s macFas5.chr19 55275372 35 + 59248254 GCACAGA----TCCCTCTGCAATCCCTTCCGGCTGAGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365390 35 + 51301725 GCACAGA----TCCCTTTGCAATCCCTTCCGGCTGAGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47071495 35 + 50890351 GCACAGA----TCCCTCTGCAATCCCTTCCGGCTGAGGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45593687 20 + 49145316 GCAC-------------------CCCCTCCTGCTGAGGA i calJac3.chr22 C 0 I 91 s canFam3.chr1 19761652 33 - 122678785 GCATAGAGCACCCCCCCAGCAATGTCCCCAAGC------ i canFam3.chr1 C 0 C 0 a score=116873.000000 s hg38.chr19_GL949747v2_alt 341412 51 + 729520 CCCTGCTACTGACCAGCTGAGGAGCCGGGCTCTGTG-----TCCGGGGAGTCCCGG s panTro4.chr19 59288985 51 + 63644993 CCCTGCTACTGACCAGCTGAGGAGCCGGGCTCTGTG-----TCGGGGGAGTCCGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171415 51 + 60714840 CCCTGCTACTGACCAGCTGAGGAGCCGAGCTCTGTG-----TCGGGAGAGTCCGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102916499 48 - 106955855 CCCTGCTACCGACCAGC---AGAGCCGAGCTCTGTG-----TCGGGGGAGTCCGTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60175385 51 + 64156825 CCCTGCTACTGACCAGCTGAGGAGTCGGGCTCTGTG-----ACGGGGGAGTCCGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55275407 51 + 59248254 CCCTGCTACTGACCAGCTGAGGAGTCGGGCTCTGTG-----ACGGGGGAGTCCGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365425 51 + 51301725 CCCTGCTACTGACCAGCTGAGGAGTCAGGCTCTGTG-----ACGGGGGAGTCCATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47071530 51 + 50890351 CCCTGCTACTAACCAGCTGAGGAGTTGGGCTCTGTG-----TCAGGGGAGTCTGGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19761685 52 - 122678785 -ATTGTTACTCACCAGCTGAAGAATAGATGTGTGTGTGTGTTGTGGGGGGTCC--- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45593707 91 + 49145316 I a score=320391.000000 s hg38.chr19_GL949747v2_alt 341463 102 + 729520 CCTCCAGAGGTTTCTGTAAACAGGGGCAGGAGAAGGATT---------------TAGAACCCGTCCCAACCAACCTGCCCTCCTCCACCCTGAGCCCCCATCCAAAGGCCGCAT--GAC s panTro4.chr19 59289036 102 + 63644993 CCTCCAGAGGTTTCTGTAAACAGGGGCAGGAGAAGGATT---------------TAGAACCCGTCCCAACCAACCTGCCCTCCTCCACCCTGAGCCCCCATCCAAAGACCGCAT--GGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171466 102 + 60714840 CCTCCAGAGGTTTCTGTAAACAGGGGCAGGAGAAGGATT---------------TAGAACCCGTCCCAACCAACCTGCCCTCCTCCACCCTGAGCTCCCATCCAAAGGCCGCAT--GGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102916547 102 - 106955855 TCTCCAGAGGTTTCTGTAAACAGGGGCAGGAGAAGGATT---------------TAGAACCCGTCCCAACCAACCTGCCCTCCTCCACCCTGAGCCCCCATCCAAAGGCCGCAT--GGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60175436 102 + 64156825 TCCCCAGAGGTTTCTGTAAACAGGGGCAAGAGAAGGATG---------------TAGAACCCGTCCCAACCAACCTGCCCTCCTCCACCCTGAGCCCCCATCCAAAGGCCGCAT--GGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55275458 102 + 59248254 TCCCCAGAGGTTTCTGTAAACAGGGGCAAGAGAAGGATG---------------TAGAACCCGTCCCAACCAACCTGCCCTCCTCCACCCTGAGCCCCCATCCAAAGGCCGCAT--GGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365476 102 + 51301725 CCTCCAGAGGTTTCTGTAAACAGGGGCAAGAGAAGGATG---------------TAGAACCCATCCCAACCAACCTGCCCTCCTCCACCCTGAGCCCCCATCCAAAGGCCGCAT--GGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47071581 102 + 50890351 CCTCTAGAGGTTTCTGTGAACAGGGGCAGGAGAAGGATG---------------TAGAACCCGTCCCAACCAACCTGCCCTCCTCCACCCTGAGCCCCCATCCAAAGGCCGCGT--GGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45593798 99 + 49145316 CCCCCAGGGGTTCCTGTAAACAAGGGCAGGAGAAATATT---------------TGGAA-CCATCCCATCCAACCTGCCCTCCTCC-CCCCGAGCCGCC-TCCAAAAGCCCCAT--GTT i calJac3.chr22 I 91 C 0 s canFam3.chr1 19761737 105 - 122678785 ------------TCTGTGACCAGGGCAGAAGGACCGATGCTAGGTGGACACCCCCAGGGTCTATCCCACTC--CTGGCCTCTCTGTACCCTGAGCACCCATCCGAAGGCCACATCCGGC i canFam3.chr1 C 0 C 0 a score=56505.000000 s hg38.chr19_GL949747v2_alt 341565 20 + 729520 CATCACGCAATCCCAGACAA s panTro4.chr19 59289138 20 + 63644993 CATCACGCAATCCCAGACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171568 20 + 60714840 CAGCATACAATCCCAGACAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3911520 18 + 106955855 CGTCACGC-ATCCCAGAC-A i nomLeu3.chr10 n 0 C 0 s rheMac3.chr19 60175538 20 + 64156825 CATCAGGCAATCCCAGACAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55275560 20 + 59248254 CATCAGGCAATCCCAGACAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365578 20 + 51301725 CATCAGGCAATCTCAGACAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47071683 20 + 50890351 CATCAGGCAATCCCAGACAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45593897 20 + 49145316 CATTACACAATCCCAGACAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19761842 20 - 122678785 CATCACTCAGGCCCAGAGAA i canFam3.chr1 C 0 I 5 a score=49782.000000 s hg38.chr19_GL949747v2_alt 341585 17 + 729520 TGTCTCGAGACTCCTGA s panTro4.chr19 59289158 17 + 63644993 CGTCTCGAGACTCCTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171588 17 + 60714840 CATCCCGAGACTCCTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3911538 17 + 106955855 TGTCCCGAGACTCCTGA i nomLeu3.chr10 C 0 I 9595 s rheMac3.chr19 60175558 17 + 64156825 TGTCCCGAGACTCCTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55275580 17 + 59248254 TGTCCCGAGACTCCTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365598 17 + 51301725 TGTCCGGAGACTCCTGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47071703 17 + 50890351 TGTCCCGAGACTCCTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45593917 17 + 49145316 TGTCCCAAGACTCCAGA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19761862 5 - 122678785 I a score=15525.000000 s hg38.chr19_GL949747v2_alt 341602 7 + 729520 GAAAACG s panTro4.chr19 59289175 7 + 63644993 GAAAACG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171605 7 + 60714840 GAAAACG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60175575 7 + 64156825 GAAAACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55275597 7 + 59248254 GAAAACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365615 7 + 51301725 GAAAACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47071720 7 + 50890351 GAAAACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45593934 7 + 49145316 GAAAATG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19761862 5 - 122678785 I e nomLeu3.chr10 3911555 9595 + 106955855 I a score=839791.000000 s hg38.chr19_GL949747v2_alt 341609 298 + 729520 AGGCAGGGGACAGGAGGCTGGGGAGAGCCCCGCTGCTTGCCCCATTCTCCCTGGGGCTGGTCACTCCCTCTGCTCCT--CCCACCACAAGCTCTTCTTGACCTCAGGGGA--CCTTTGAGGTCCTGGGGGGACATGAAGGTGGATTGGAGCCTCTCCAGTGGACTTTGACTCCAGGACATCTC--GGGCTGAGCACACACAGGGGTGCATGTGGTCACATACCAAAGGTTTTCCCAAAGCACTGTCCCGCCCTGGTCAGGGGCCATCCCTGGACCCTGCGTTCTGCCCAGTGGGAGATGAACCA s panTro4.chr19 59289182 298 + 63644993 GGGCAGGGGACAAGAGGCTGGGGAGAGCCCCGCTGCTTGCCCCATTCTCCCTGGGGCTGGTCACTCCCTCTGCTCCT--CCCACCACAAGCTCTTCTTGACCTCAGGGGA--CCTTTGAGGTCCTGGGGGGACTTGAAGGTGGATTGGAGCCTCTCCAGTGGACTTTGACTCCAGGACATCTC--GGGCTGAGCACACACAGGGGTGCATGTGGTCACATACCAAAGGTTTTCCCAAAGCACTGTCCCACCCTGGTCAGGGGCCATCCCTGGACCCTGTGTTCTGCCCAGTGGGAGATGAACCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171612 298 + 60714840 GGGCAGGGGACAGGAGGCTGGGGAGAGCCCCGCTGCTTGCCCCATTCTCCCTGGGGCTTGTCACTCCCTCTGCTCCT--CCCACCACAAGCACTGCTTGACCTCAAGGGA--CCTTTGAGGTCCTGGGGGGACATGAAGGTGGATTGGAGCCTATCCAGTGGACTTTGACTCCAGGATATCTC--GGGCTGAGCACACACAAGGGTGCGTGTGGTCACATACCAAAGGTTTTCCCAAAGCACTGTCCCGCCCTGGTCAGGGGCCATCCCTGGCCCCTGTGTTCTGCCCAGTGGGAGATGAACCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102916649 269 - 106955855 AGGCA---------------------------CTGCTTGCCCCATTCTCCCTGGGGCTGGTCACTCCCTCTGCTCCT--CCCACCACAAGCTCTGCTTGACCTCAGGGGA--CCGTTGAGGTCCTGGGGGGACATGAAGGTGGA-TGGAGCCTCTCCAGTGGACTTTGACTCCAGGACATCTC--GGGCTGAGCACACACAGGGGTGCGTGTGGTCACAAACCAAAGGCTTTCCCAAAGCACTGTCCCGCCCTGGTCAGGGACCAG-GATGGCCCCTGTGTTCTGCCCAGTGGGAGACGAACCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60175582 300 + 64156825 GGGCAGGGGACAGGAGGCTGGGGAGAGCCCCGCTGCTTGCCCCATTCTCCCTGGGGCTGGTCACTCCCTCTGCTCCT--CCCACCACAAGCTCTGCTTGACCTCAGGGGA--CCTTTGAGGTCCTGGGGGGACATGAAGGTGGGTTGGAGCCTCTCCAGTGGACTTTGACTCCAGGACATCTCTGGGGCTGAGCACACACAGGGGTGCGTGTGGTCACATACCAAAGGTTTTCCCAAAGCACTGTCCAGCCCTGACCAGGGGCCATCCCTGGGCCCTGTGCTCTGCCCAATGGGAGATGAACCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55275604 298 + 59248254 GGGCAGGGGACAGGAGGCTGGGGAGAGCCCCGCTGCTTGCCCCATTCTCCCTGGGGCTGGTCACTCCCTCTGCTCCT--CCCACCACAAGCTCTGCTTGACCTCAGGGGA--CCTTTGAGGTCCTGGGGGGACATGAAGGTGGGTTGGAGCCTCTCCAGTGGACTTTGACTCCAGGACATCTC--GGGTTGAGCACACACAGGGGTGCGTGTGGTCACATACCAAAGGTTTTCCCAAAGCCCTGTCCAGCCCTGACCAGGGGCCATCCCTGGGCCCTGTGCTCTGCCCAATGGGAGATGAACCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365622 295 + 51301725 GGGCAGGGGACAGGAGGCTGGGGAGAGCCCCGCTGCTTGCCCCATTCTCCCTGGGACTGGTCACTCCCTCTGCTCCT--CCCACCACAAGCTCTGCTTGACCTCAGGGGA--CC-TTGAGGTCCT-GGGGGACATG-AGGCGGGCTGGAGCCTCTCCAGTGGACTTTGACTCCAGGACATCTC--CGCTTGAGCACACACAGGGGCGTGTGTGGTCACGTTCCAAAGGTTTTCCCAAAGCCCTGTCCAGCCCTGACCAGGGGCCATCCCTGGGCCCTGTGCTCTGCCCAATGGGAGATGAACCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47071727 300 + 50890351 GGGCAGGGGACAGGAGGCTGGGGAGAGCCCCGCTGCTTGCCCCATTCTCCCTGGGGCTGGTCACTCCCTCTGCTCCT--CCCACCACAAGCTCTGCTTGACCTCAGGAGA--CCTTTGAGGTCCTGGGGGGACATGACGGTGGGTTGGAGCCTCTCCAGTGGACTTTGACTCCAGGACATCTCTGGAGCTGAGCACACACAGGGGTGCGTGTGGTCACATACCAAAGGTTTTCCCAAAGCCCTGTCCAGCCCTGACCAGGGGCCATCCCTGGGCCCTGTGCTCTGCCCAATGGGAGATGAACCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45593941 288 + 49145316 GGGCAGGGGACAGGAGGCT-GGGAGAGCCCCGCTGCTTGGCCCATTCTGCCAGGGGCTGGTCACTCCCTCTGCTCCCCACTCCCCACCAGCTCTGCTTGACCTCAGGGGACTCCTTTGAGGCCCTGGGGGTACATGAAAGTGGAT--------------TGGACTTGGACTCCAGGATGTCTCTGCGGCTGAGCACACACAGGGGTCCGTGTGGTCACACACCAGAGGATGTCCCACAGTACTGCCCAGCCCTGGTCAGGAGCCA-CCCTGGACCCTGTGTTCTGCCCAATGGGAGATGAGCCA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19761862 5 - 122678785 I a score=1245145.000000 s hg38.chr19_GL949747v2_alt 341907 384 + 729520 CTCCAGGAGAAGCACATTGCCTGGGG-----CAGGTTCTGGCTCAGT---GGAAAGGAAT---AAGCGGGACCATCCATCCCGTGTGAAAAGACACTCATCCTCTTGTAGGGGGGTTGCCCCCTAATCTCTGGGAACCCACTCCCCACCCAGCCAAGCAGAGCCAGCTCTGAGCCCACCAG----ATGCTGGAGCTGAGTGTCCACGCCATCCGTGGCGTCCAGAGGAGATCAGGGCTCCAGGGACCTAA-----GCGGGTATGA-GGCAGAGGGGAGGTGTGTGCAGACGGAGAGGGGAAGGGGAGGGCTTGGCGGTCAGG--AGGAGGACAAGGTTGGCCAC----AGAGGA--CAGCAGCTGGGAcagggtccagggacctggggacaagctcgagggtcgagCTGAGAC s panTro4.chr19 59289480 384 + 63644993 CACCAGGAGGAGCACATTGCCTGGGG-----CAGGTTCTGGCTCAGT---GGAAAGGAAT---AAGCGGGACCATCCATCCCGTGTGAAAAGACACTCATCCTCTTGTAGGGGGTTTGCCCCCTAATCTCTGGGAACCCACTCCCCACCCAGCCAAGCAGAGCCAGCTCTGAGCCCACCAG----ATGCTGGAGCTGAGTGTCCAGGCCATCCGTGGCGTCCAGAGGAGAACAGGGCTCCAGGGACCTAA-----GCAGGTGTGA-GGCAGAGGGGAGGTGTGTGCAGACAGAGAGGGGGAGGGGAGGGCTTGGCGGTCAGG--AGGAGGGCAAGGTTGGCCAC----AGAGGA--CAGCAGCTGGGACAGGGTCCAGGGACCTGGGGACAAGCTCGAGGGTCGAGCTGAGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171910 382 + 60714840 CACCAGGAGAAGCATATTGCCTGGGG-----CAGATTCTGGCTCAGT---GGAAAGGAATAACAAGTGGGACCATCTATCCTGTGTGAAAAGACACTCATCCCCTTGTAGGGGGGTTGCCCCCTAATCTCTGGGGACCCACTCCCCACCCAGCCAAGCAGAGCCAGCTCTGAGCCAACCCA----ATGCTGGGGCTGAGTGTCCAGGCAATCCATGGTGTCCAGAGGAGACCAGGGCTCCAGGGACCTAA--------------A-GGCAGAGGGAATCTGTGTGCAGAGGGAGAAGGGGAGGGTAGGGGTTGGGGATCAAG--AGGAGGGCAAGGGTGGCCACAGAGAGAGGA--CAGCAGCTGGGACAGGGTCCAGAGACCTGGGGACAAGCTCGAGAGGCAGGCTGAGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102916918 390 - 106955855 CACCAGGAGAAGCACATTGCCTGGGG-----CAGATTCTGGCTCAGA---GGAAAGGAATAACAAGTGGGACCATCCATCCTGTGTGGAAAGACACTCAACCCCTTGTAGGGGGGTTGCCCCC-AATCTCTGGGAACCTCCTCCCCACCCAGCCAAGCAGAGCCAGCTCTGAGCCCACCGG----ATGCTGGGGCTGAGTGTCCAGGCCATCCGTGGCGTCCAGAGGAGACCAGGGCTCCAGGGACCTAA-----GCAGGTGTGA-GGCCGAGGGAACCTGTGTGCAGAGGGAGAGGGGGAGGGGAGGTCTTGGGGTTCAGG--AGGAGGGCAAGGGTGGCCACAGAGAGAGGA--CAGCAGCTGGGACAGGGTCCAGGGACCTGGGGACAAGCTCGAGGGTCGAGCTGAGAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60175882 392 + 64156825 CACCAGGAGAAGCACATTGCCTGGGG-----CAGGTTCTGGCTCAGT---GGAAAGGAATAACAAGTGAGACCATCCATCCTGTGTGAAAAGACACTCATCCCCTTGTAGGGGGGTCGCCCCCTAATCTCTGGGAACCCACTCCCCACCCAGCCAAGCAGAGCCAGCTCTGAGCCCACCGG----ATGCTGGGGCTGAGTGTCCAGGCCATCCGTGGTGTCCGGAGGAGACCAGGGCTCCAGGGACCTAA-----GCAGGTGCGAGGGCAGAGGGGAGGTGTGTGCAGAGGGAGAGGGGGAGAGGAGGGCTTGGGGGTCAGG--AGGAGGGCAAGGGTGGCCACAGAGAGAGGG--CAGCAGCTGGGACAGGGTCCAGGGACCTGGGGACAAGCTCGAGGGCCGAGCTGAGAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55275902 392 + 59248254 CACCAGGAGAAGCACATTGCCTGGGG-----CAGGTTCTGGCTCAGT---GGAAAGGAATAACAAGTGAGACCATCCACCCTGTGTGAAAAGACACTCATCCCCTTGTAGGGGGGTCGCCCCCTAATCTCTGGGAACCCACTCCCCACCCAGCCAAGCAGAGCCAGCTCTGAGCCCACCGG----ATGCTGGGGCTGAGTGTCCAGGCCATCCGTGGTGTCCGGAGGAGACCAGGGCTCCAGGGACCTAA-----GCAGGTGCGAgggcagaggggaggtgtgtgcagagggagagggggagaggagggcttgggggtcagg--aggagggcaagggTGGCCACAGAGAGAGGG--CAGCAGCTGGGACAGGGTCCAGGGACCTGGGGACAAGCTCGAGGGCCGAGCTGAGAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365917 386 + 51301725 CACCAGGAGAAGCACATTGCCTGGGG-----CAGGTTCTGGCTCAGT---GGAAAGGAATAACAAGTGAGACCATCCATCCTGTGTGAAAAGACACTCATCCCCTTGTAGGGGGGTCGCCCCCTAATCTCTGGGAACCCACTCCCCACCCAGCCAAGCGGAGCCAGCTCTGAGCCCACCGG----ATGCTGGGGCTGAGTGTCCAGGCCATCCGTGGCATCCAGAGGACACCAGGGCTCCAGGGACCTAA-----GCAGGTGTgagggcagaggggagatgtgtgcagagggagacggggaggggagggcttgggggtcagg--aggagggcaagggtggccacagagagaggg--cAGCAGCTGGGACAGTGTCCAGGGACCTGT------GCTCGAGGTCTGAACTGAGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47072027 385 + 50890351 CACCAGGAGAAGCACATTGCCTGGGG-----CAGGTTCTGGCTCAGT---GGAAAGGAATAACAAGTGAGACCATCCATCCTGTGTGAAAAGACACTCATCCCCTTGTAGGGGGGTC-CCCCCCAATCTCTGGAAACCCACTCCCCACCCAGCCAAGCGGAGCCAGCTCTGAGCCCATCGG----ATGCTGGGGCTGAGTGTCCAGGCCATCCGTGGTGTCCGGAGGAGACCAGGGCTCCAGGGACCTAA-----GCAGGTGTGAGGGCAGAGGGGAGGTGTGTGCAGTGGGAGAGGGGGAGAGGAGGGCTTGGGGGTCAGG--AGGAGGGCAAGGGTGGCCACAGAGAGAGGG--CAGCAGCTGGGACAGGGTCCAGGGACCTGT------GCTTGAGGGCCAAGCTGAGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45594229 391 + 49145316 CAGCAGGAGGAGCACATTCCCTGGGG-----CAGGTTCTGGCTCAGG---GGAGAGGAATAACAAGTG-GACCATCCATCCTGTGTGAAAAGACGCTCAGCCCCTTGTAGGGGGGTTGCCCCCTGATCTCTGGGAACCCACTCCCCACCCAGCCAAGCAGAGGCATCTCTGAGCCCACCCG----CTGCTGGGGCTGAGTGTCCAGGTCATCTGTGGTGTCCAGAGGGGACCAGGGCTCCAGGGACCTAA-----GCAAGTGTGACGGCAGGGTGGAGGGGTGCGCAGAGGGAGAGGGGGAGGGCAGGGCTTGGGGGTCAGG--AGGAGGGCAAGGGTGGCCACAGAGAGAGGA--CAGCAGCTGGGACAGGGTCCAGGGACCTGGGGACAAGCTCGAGGGCAGAGCTGAGAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 102816998 369 + 122678785 CTGCAAGCAAGGCACATGCCCTGGGGCCCCACAGATCCTGGCCCCGTCCAGGAAAGGA-----CAGTTTAACA--CCATCCTTAGTGAGAGGGCTC----------------------------AGTCTCTGGAAGCCCATTCCCCACCCAGCCCC-CATGCCAAGCTCTGTGCCTCCCCGACCAATGCTGGGACTGAGCGTCCAGGCCATTCAT-GTGTCCAGATGAGACCAGGGCTCCGGGGACCTAACGCCACCAGGTGGAA-GGCAGAGGG-ACAGGCGTGCAGAGGGAGAGAGGGAGTAGAGGGCCTGAAG---AGGCCAGGAGGGCAGAGGAGCCTGTGAACAGGGGATGCGGCAG--GGAACAGGGTCCAGGGAGCTGGGGGCAAACCTGAGGGCAGAGGTGAGAT i canFam3.chr1 n 5 n 5 a score=19433.000000 s hg38.chr19_GL949747v2_alt 342291 6 + 729520 TGGGGC s panTro4.chr19 59289864 6 + 63644993 TGGGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56172292 6 + 60714840 TAGGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102917308 6 - 106955855 TGGGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60176274 6 + 64156825 TGGGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55276294 6 + 59248254 TGGGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47366303 6 + 51301725 TGGGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47072412 6 + 50890351 TGGGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45594620 6 + 49145316 TAGGGC i calJac3.chr22 C 0 C 0 e canFam3.chr1 102817367 5 + 122678785 I a score=1160716.000000 s hg38.chr19_GL949747v2_alt 342297 370 + 729520 AGGGCCCAGGT--GACGTCCTCACCTTTCACCAGCAGCTCCAGGTAGTCACTCTGCTCAGACCATTTAGGGGGCTTATAATAGATGCAGCGATAAGGCCCGGCATTTCCTTCACTTACTGAGTCAATGCGGAATCTGGCCTCTGACTCAGATGGACTAGCTTGAGACACATCTTCAGTATCATTGTATGTGGATCTACTCTCCCTCTCCAGGCGGAATGTTTGAACCCCAACCGGGCCCCGGCACACGAAAGTCACATGGCTCCCCAGGGGGATCACGGTGCCTGGCTCAGCCGAGATGGAGGGTCTGGGCAGATCTTCTAGGAGGGAAGCAGAGCAGGATCTCAGCGTCCACTGTAGGaagtcaccatgcc s panTro4.chr19 59289870 370 + 63644993 AGGGCCCAGGT--GACGTCCTCACCTTTCACCAGCAGCTCCAGGTAGTCACTCTGCTCAGACCATTTAGGGGGCTTATAATAGATGCAGCGATAAAGCCCGGCATTTCCTTCACTTACTGAGTCAATGCGGAATCTGGCCTCTGACTCAGATGGACTAGCTTGAGACACATCTTCAGTATCATTGTATGTGGATCTACTCTCCCTCTCCAGGCGGAATGTTTGAACCCCAACCGGGCCCCGGCACACGAAAGTCACATGGCTCCCCTGGGGGATCACAGTGCCTGGCTCAGCCGAGATGGAGGGTCTGGGCAGGGCCCCTAAGAGGGAAGCAGAGAAGGATCTCAGCGTCCACTGTAGGaagtcaccatgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56172298 370 + 60714840 AGGGCCCAGGT--GACGTCCTCACCTTTCACCAGCAGCTCCAGGTAGTCACTGTGCTCAGACCATCTGGAGGACTTAAAATAGAGGCAGCGATAACACCCAGCACTGTCTTCACTTACTGAGTCAATGCGGAATCTGGCCTCTGACTCAGATGAACTAGCTTGAGACACGTCATTAGTATCATTGTACTTGGATCTACTCTCCCTCTCCAGGCGGAATGTTTGAACCCCAGCCGGGCCCCGGCACACGAAAGTCACACGGCTTCCCGGGGGGATCGTGGTGCCTGGCTCAGCCGAGATGGAGGGTCTGGGCAGGGCCCCTAGAAGGGAAGCAGAGAAGGATCTCAGCGTCCACTGTAGGaagtcaccatgcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102917314 370 - 106955855 AGGGCCCAGGT--GACGTCCTCACCTTTCACCTGCAGCTCCAGGAAGTCACTGTGCCCAGACCATCTGGAGGACTTCAGATAGAGGCAGAAATAACGCCCAGCACTGTCTTCACTTACTGAGTCAACGTGGAATCTGGCCTCTGACTCAGATGGACTAGCTTGAGACACATTATTGGTATCACTGTACTTGGATCTACTCTCCGTCTCCAGGCGGAATGTCTGAACCCCAGCTGGGCCCCGGCACACGAAAGTCACATGGCTTCCCAGGGGGATCACAGTGCCTGGCTCGGCCAAGATGGAGGGTCTGGGCAGGGCCCCTAGGAGGGAAGCAGAGAAGGATCTCAGCGTCCACGGTAGGAAGTCACCACGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60176280 370 + 64156825 AGGGCCCAGGT--GACGTCCTCACCTTTCACCACCAGGTCCAGGTAGTCGCTGTGCTCAGACCATCTGGTGGACTTCACATAGAGGCAGCGATAATGTCCGGCATTTCCTTCACTTACTGAGTCAATGCGGAATCTGGCCTCGGACTCAGATGGACTAGCTTGAGACACATCCTTAGTATCATTGAACTTGGATCTATCCTCCCTCTCCAGGCGGAATTGGTCAACCCCAACCGGGCCCCGGCACACGATAGTCACAGGCCTCCCCGGGGGGATCACGGTGCCTGGCTCAGCTGAGATGGAGGGTCTGGGCAGGGGCCCTAGGAGGGAAGCAGAGAAGGACCTCAGTGTCCACTGTAGGAAGTCACCATGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55276300 370 + 59248254 AGGGCCCAGGT--GACGTCCTCACCTTTCACCACCAGGTCCAGGTAGTCGCTGTGCTCAGACCATCTGGTGGACTTCACATAGAGGCAGCGATAATGTCCGGCATTTCCTTCACTTACTGAGTCAATGCGGAATCTGGCCTCGGACTCAGATGGACTAGCTTGAGACACATCCTTAGTATCATTGAACTTGGATCTATCCTCCCTCTCCAGGCGGAATTGGTCAACCCCAACCGGGCCCCGGCACACGATAGTCACAGGCCTCCCCGGGGGGATCACGGTGCCTGGCTCAGCTGAGATGGAGGGTCTGGGCAGGGGCCCTAGGAGGGAAGCAGAGAAGGACCTCAGCGTCCACCATAGGaagtcaccatgcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47366309 370 + 51301725 AGGGTTCAGGT--GACACCCTCACCTTTTACCACCAGCTCCAGGTATTCACTGCCTGTAGACCATCGGTGGAGCTTATAATAGATGCAGCGATAATGCCCGGCGTTGCCTTCACTTACTGAGTCAATGTGGAATCTGGCCACTGACTCAGATGGACTAGCTTGAGACACATCACTAGTATCATTGTAGTCGTATATACTCTTCCCCTCCAGGCGGAATGTTTCAACCCGACCTGGGCCCCGGCACACGAAAGTCACAGGACTCCCCGGGGAGATCACGGTGCCTGGCTCAGCCGAGATGGAGGGTCTGGGCAGGGGCCCTAGGAGGGAAGCAGAGAAGGACCTCAGCGTCCACCGTGGGAAGTCACCATGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47072418 370 + 50890351 AGGGTACAGGT--GACGTCCTCACCTTTCACCACCAGGTCCAGGTAGTCGCTGTGCTCAGACCATCCGGCGGAATTTACATAGATGCAGCGATAACGTCCGGCATTTCCTTCATTTACTGAGTCAATGCGGAATCTGGCCTCTGACTCAGATGGACTAGCTTGAGACACATCCTTAGTATCATTGAACTTGGATCTATCCTCCCTCTCCAGGCGGAATGTTTGAACCTGAACCGGGCCCCGGCACACGATAGTCACAGGCCTCCCCGGGGGGATCACAGTGCCTGGCTCAGCCGAGATGGAGGGTTTGGGCAGGGGCCCTAGGAGGGAAGCAGAGAAGGACCTCAGCATCCACCGTAGGAAGTCACCATGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45594626 369 + 49145316 AGGGCCCAGGT--GGCGTCCTCACCTTTCACCACCAGCTCCAGCTGCTCACTGTGCTGAGACCATCTGGAGGCCTTATGATAGATGCAGCGATAATGCCCGGCGCTGTCCTCACTCACTGAGTCAATGCGGAATGTGGCCTCTGACAAAAATGGACTAACTAGAGACACATCATAATTATCTTTGTACTGGGCTCTATTCTCCCTCTCCAGGCGGAATTCGTGAACCCCAACTGGGCCCCGGCACACGAAAGTCACAGGGCTCCCCAGGGGGATCACGGTGCCTGGCTCAGCCGAGATGGAGGGTCTGGGCAGGGCCCCTAGGAGGGAAGCAGAGAAGGA-CTCAGTGTCCACTGTAGGAAGTCACCATGTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19761867 360 - 122678785 AGGGCAGAGGTGAGATGTCCTCACCTGTCACCACCAGCTGCAGTTCCTTGCTGCGGTCAGACCAGGTGCCGTCTTTATTATAGAGGCAGCGATAGCGCCGGGCAGTGTCTTCACCCACCGCAGGGATGGGGAATCTGGCCTGCGTCTCATGTTG-------TGGG-----TTCCTCACATCTTTATGTAGAGCACTTCCCTCCTTCTCCAGGCGGAATGTCTCAGCCCCAGCAGGGCCCTGGCACACGATGGTCACCGGCTGCCCCCGGGGAATCTCAGAGCTCGGCTGGGCCCAGATGGAGGGGCTGGGCAGGACCCCTAGGAGGGAAGCAGAGCAGGTTCTTGGGGTCCGTTCTGAGGAGACAGCCTGTC i canFam3.chr1 I 5 I 904 a score=64890.000000 s hg38.chr19_GL949747v2_alt 342667 29 + 729520 acacacgtcattttagcatcacaat-----------------tcag s panTro4.chr19 59290240 29 + 63644993 acacatgtcattttagcatcacaat-----------------tcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56172668 29 + 60714840 acacacgtcattttagcatcacaat-----------------tcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102917684 29 - 106955855 ACACACATCATTTTAGCATCacact-----------------tcag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60176650 46 + 64156825 ACACGTGTCATTTTAGCATCACACTCATTTTAGCGTCACATGTCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55276670 29 + 59248254 acacgtgtcattttagcgtcacact-----------------tcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47366679 29 + 51301725 ACATGTGTCATTTTAGTATCATACT-----------------TCAG i papAnu2.chr19 C 0 I 322 s chlSab2.chr6 47072788 29 + 50890351 ACACGTGTCATTTTAGCATCACACG-----------------TCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45594995 25 + 49145316 ACA--TGTCATTC--GCATCacaat-----------------tcag i calJac3.chr22 C 0 C 0 e canFam3.chr1 19762227 904 - 122678785 I a score=1590474.000000 s hg38.chr19_GL949747v2_alt 342696 550 + 729520 ggattttagcaattttatagagttatgcagccatgaccacagcccaaccttagaacattcccaAGCCTCCTGCACCTTCTACGTGCATGTG-ATTCTCATCACTGCAGAGTt-ttttcccagttgacagtgaggaccctgagacttgctcacaacttgggccttgctcagggtcacgtgggaagtgtcggagcaggctggggcccttcatgcctgctgcagagcccagggccactttccaGAGGGACAGAGTGTGGGAGGGAGGCACAGGATGGGGATGACAGGGTCATTGGTGAAGGACAAGGGACAGAGAAGCGAGGGCTCTGGAGATGGCTTGTGCTGGGGCCTGAAGGGCACTGGCCGGTCCCCGGGTGGGACTGAGTGTGGGATGGGGGTTGCCAGGCTCCTTTGAGGGTCTGGT-GGGGTGAGGGTGAAG-CCCCCAG-----------CCCTGATCTGCTCACAGCAGATGCCCAGCCCGTGACAGGTCCCCATTGCTAATGCAGATCTCTGTGGAGACACCACCTCTGGGTTTTCCTCTATAGTTTCTACTTTCTTC s panTro4.chr19 59290269 550 + 63644993 ggattttagcaattttatagagttatgcagccatgaccacagcccaaccttagaacattcccacacctccTGCACCTTCTACGTGCATGTG-ATTCTCATCACTGCAGAGTt-ttttcccagttgacagtgaggaccctgagacttgctcacaacttgggccttgctcagggtcacgtgggaagtgtcggagcaggctggggcccttcatgcctgctgcagagcccagggccactttccaGAGGGACAGAGTGTGGGAGGGAGGCACAGGATGGGGATGACAGGGTCATTCGTGAAGGACAAGGGACAGGGAAGCGAGGGCTCTGGAGATGGCTTGTGCTGGGGCCTGAAGGGCACTGGCCGGTCCCCGGGTGGGACTGAGTGTGGGATGGGGGTTGCCAGGCTCCTTTGAGGGTCTGGT-GGGGTGAGGGTGAAG-CCCCCAG-----------CCCTGATATGCTCACAGCAGATGCCCAGCCCGTGACAGGTCCCCATTGCTAATGCAGATCTCTGTGGAGACACCACCTCTGGGTTTTCCTCTATAGTTTCTACTTTCTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56172697 549 + 60714840 ggattttagcaattttatagagttatgcagccacgaccacagcccaaccttagaacattcccacgcctccTGCACCTTCTACGTGCATGTG-ATTCTCGTCGCTGCAGAGTt-ttttcccagttgacagtaaggaccctgagacttgctcacaactagggacttgctcagggtcacgtgggaagtgtcggagcagcctggggcccttcatgtgtgctgcagagcccagggccactttccCGAGGGACAGAGGGTGGGAGGGAGGCACAGGATGGGGATGACAGGGTCATTCGTGAAGGACAAGGGACAGGGAAGCGAGGGCTCTGGAGATGGCTCGTGCTGGGGCCTGAAGGGCACTGGCCGGTCCCCGGGTGGGACTGAGTGTGGGACGGGGGTTGCCAGGCTCCTTTGAGGGTCCAGT-GGGGTGAAGGTGAAG-CCCCCAG-----------CCCTGATCTGCTCACAGCAGATGCCCAGCCCATGACAGGTCCCCATTGCTAATGCAGATCTCTGTGGAGACACCACCTCTGGGTTTTCCTC-ATAGTTTCTACTTTCTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102917713 551 - 106955855 ggtttttggcaattttatagagttatgcagccacgaccacagcccaaccttagaacattcccaCGCCTCCTGCACCTTCTACGTGcatatg-atcctcatcgctgcagagttcttttcccagttgacagtaaggaccctgagacttgctcacaatttgggtcttgctcagggtcacgtgggaagtgtcggagcagcctggggcccttcatgtctgctgcagagcccagggccactttccagagggacggagggtgggagggaggCACAGGATGGGGATGACAGGGTCATTCGTGAAGGACAAGGGACAGGGAAGCGAGGGCTCTGGAGATGGCTCGTGCTGGGGCCTGAAGGGCACTGGCCGGTCCCCGGGTGGGACTGAGTGTGGCACGAGGGTTCCCAGGCTCCTGTGTGGGTCCGAT-GGGGCGAGGGTGAAGCCCCCCAG-----------CCCTGATCTGCTCACAGCGGATGCCCAGCCCGTGACAGGTCCCCGCTGCTAATGCAGGTCTCTGTGGAGACACCACCTCTGGGTTTTCCTT-ATAGTTTCTACTTTCTTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60176696 559 + 64156825 GGATTTTAGCAATTTTGTAGAGTTGTGCAGCCACGACCACAGCCCAACCTTAGAACATCGCCAGGCCTCCTGCACCTTCTACGTGTGCGGGAATCCTCATCGGTGCAGAGTTATTTTCCCAGTTGACAATAAGGACCCCGAGACTTGCTCACAACTTGGGCCTTGCTCAGGGTCACGTGGGAAGTGTCGGAGCAGCCTGGGGCCCCTCATGTCTGCCG-AGAGCCCAGGGCCACTTTCCAGAGGGACAGAGGGCGGGA-GGGGGCACAGGACGGGGATGACAGGGTCATTCGTGAAGGACAAGGGACAGGGGAGCGAGGGCTCTGGAGATGGCTCGTGCTGGGGCCTGAAGGGCACTGGCCGGTCCCCGGGTGGGACTGAGTGTGGGACGGGGGTTGCCAGGCTCCTGTGAGGGTCCGAT-GGGGTGAGGGTGAAG-CCCCCAGCCCTGACCCAGCCCTGATCTGCTCACAGCAGATGCCCAGCCCGTGACAGGTCCCCATTGCTAATGCAGGTCTCTGTGGAGACACCACCTCTGGGTTTTCCTC--TAGTTTCTACTTTCTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55276699 558 + 59248254 ggattttagcaattttgtagagttgtgcagccacgaccacagcccaaccttagaacatCGCCAGGCCTCCTGCACCTTCTACGTGTGCGGGAATCCTCATCGGTGCAGAGTTATTTTCCCAGTTGACAATAAGGACCCCAAGACTTGCTCACAACTTGGGCCTTGCTCAGGGTCACGTGGGAAGTGTCGGAGCAGCCTGGGGCCCCTCATGTCTGCCG-AGAGCCCAGGGCCACTTTCCAGAGGGACAGAGGGCGGGA--GGGGCACAGGACGGGGATGACAGGGTCATTCGTGAAGGACAAGGGACAGGGGAGCGAGGGCTCTGGAGATGGCTCGTGCTGGGGCCTGAAGGGCACTGGCCGGTCCCCGGGGGGGACTGAGTGTGGGACGGGGGTTGCCAGGCTCCTGTGAGGGTCCGAT-GGGGTGAGGGTGAAG-CCCCCAGCCCTGACCCAGCCCTGATCTGCTCACAGCAGATGCCCAGCCCGTGACAGGTCCCCATTGCTAATGCAGGTCTCTGTGGAGACACCACCTCTGGGTTTTCCTC--TAGTTTCTACTTTCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47367030 548 + 51301725 ggattttAGCAATTTTATAGAGTTGTGCAGCTACGACCGCAGCCCAACCTTAGAACGTTGCCACGCCTCCTGCACCTTCTACGTGCGCGGGAATCCTCATCGGTGCAGA-TTATTTTCCCAGTTGACAATAAGGACCCTGAGACTTGCTCACAACGT-GGCCTTGCTCAGGGTCACGTGGGAGGTGTCGGAGCAGCCTGGGGCCCCTCATGTCTGCCG-AGGGCCCAGGGCCACTTTCCAGAGGGACAGAGGGCGGGA-GGAGGCACAGGACGGCGATGACAGGGTCATTCGTGAAGGACAAGGGACAAGGGAGCGAGGGCTCTGAAGATGGCTCGTGCTGGGGCCTGACAGGTATTGGCCGATCCCCGGGTGGGACTGAGTGTGGGACGGGGGTTGCCAGGCTCCTGTGAGGGTCCGAT-GGGGTGAGGGTGAAG-CCCCCAGCC---------CCCTGATCTGCTCACAGCAGATGCCCAGCCCGTGACAGGTCCCCATTGCTAATGCAGGTCTCTGTGGAGACACCGTCTCTCGGTTTTCCTC--tagtttctcctttctcc i papAnu2.chr19 I 322 C 0 s chlSab2.chr6 47072817 547 + 50890351 GGATTTTAGCAATTTTGTAGAGTTGTGCAGCCACGACCACAGCCCAGCCTTAGAACGTTGCCAGGACTCCTGCACCTTCTACGTGTGCAGGAATCCTCATCGGTGCAGAGttattttcccagttgacaataaggaccccgagacttgctcacaactt-ggccttgctcagggtcacatgggaagtgtcggagcAGCCTGGGGCCCCTCATGTCTGCTG-AGAGCCCAGGGCCACTTTCCAGAGGGACAGAGGGCGGGA-GGAGGCACAGGACGGGGATGACAGGGTCATTCGTGAAGCACAAGGGACAGGGGAGCGAGGGCTCTGGAGATGGCTCGTGCTGGGGCCTGACGGGCACTGTCCGGTCCCCGGGTGGGACTGAGTGTGGGACGGGGGTTGCCAGGCTCCTGTGAGGGTCCGAT-GGGGTGAAGGTGAAG-CCCCCAG-----------CCCTGATCTGCTCACAGCAGATGCCCAGCCCGTGACAGGTCCCCACTGCTAATGCAGGTCTCTGTGGAGACACCACCTCTGGGTTTTCCTC--TAGTTTCTACTTTCTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45595020 548 + 49145316 ggtttttagcaaatttatacagttatgcagccgcaaccacagcccaactttagatcatttcc-CGTCTCCTGCACCTTCCACCTGCGTGTCAATTCTCATCGCTGCGGAGTTATTTTCCCAGTGGACACTAAGGACCCTGAGACTTGCTCACAGCTTGAGCCTCGCTCAGGGTCACGTGGGAAGAGTCAGAGCGGCCTGGGGCCCTTCGTGTCTGCTGCAGAGCCCAGGGCCACTTTCCAGAGGGACAGAGGGTGGGAGGGAGGCACAGCATGGGGATGACACCGTCACTTGTGAAGGACAGGGGACAGGGAAGTGAGAGTTCTGGAGATGACAGGTGCTGGGGCCCGAAGGGCACTGGCCAGT-CCCGGGTGGGACTGAGTGTGGGATGGGGGTTGCCAGGCTCCTGTGAGGGTCTGGTGGGGGGGAGGGGGAAG-CCCCCAG-----------CCCTGATCTGCTCGAAGCA---GCCCAGCCCGTGACAGGTCCCCGCTGCTAATGCAAGTCTCTGTGGAGCCACCACCTCTGGGTTTTCCTGTAAAGTTTCTGCTGTCTTC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19762227 904 - 122678785 I a score=672586.000000 s hg38.chr19_GL949747v2_alt 343246 218 + 729520 TCAGCCTAATTTGCATTTCCTTCTTATTAAGGCTCTTGAAAAACCCCATTTATCTCAACTGGGCTTGGGGTGGAGGAGGAAGGGCGGGTTTGATGCCCTG-AAACAGG-AAGGTTGTGTCAAAATTAGCAAAATCCCTGAGCGGGGCAGAGAGCTGGCAGGGCTTCAATTCACTCGTCCCGTCTTCATTCATTCCTTATTattgacaaattaaaactgca s panTro4.chr19 59290819 218 + 63644993 TCAGCCTAATTTGCATTTCCTTCTTATTAAGGCTCTTGAAAAACCCCATTTATCTCAACTGGGCTTGGGGTGGAGGAGGAAGGGCGGGTTTGACGCCCTG-AAACAGG-AAGGTTGTGTCAAAATTAGCAAAATCCCTGAGCGGGGCAGAGAGCTGGCAGGGCTTCAATTCACTCGTCCCGTCTTCATTCATTCCTTATTattgacagattaaaactgca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56173246 218 + 60714840 TCAGCCTAATTTGCATTTCCTTGTTATTAAGGCTCTTGAAAACCCCCATTTATCTCAACTGGGCTTGGGGTGGAGGAGGAAGGGCGGGTTTGACGCCCTA-AAACAGG-AAGGTTATGTCAAAATTAGCAAAATCCCTGAGCGGGGCAGAGAGCTGGCAGGGCTTCAAGTCACTCATCCCATCTTCAtttattctttattattgacaaattaaaactgca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102918264 218 - 106955855 TCAGCCTAATTTGCATTTCCTTGTTATTAAAGCTCTTGAAAAACCCCATTTATCTCAACTGGGCTTGGGGTGGAGGAGGAAGGGCGGGTTTGAAGCCCTG-AAACAGG-AAGGTTGTGTCAAAATTAGCAAAATCCCTGAGCAGGGCAGAGAGCTGGCAGGGCTTCAATTCACTCATCGCGACTTCAATCATTCCTTATTattgacaaattaaaactgca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60177255 216 + 64156825 TCAGCCGAATTTGCATTTCCTTGTTATTAAAGCTCTTGAAAAACCCCATTTATCCCAACTGGGCTTGGGGTG--GGAGGAAGGGCAGGTTTGATGCCCTG-AAACAGG-AAGGTTGTGTCAAAATTAGCGAAATCCCTGAGCAGGGCAGAGAGCTGGCAGGGCTTCAGTTCGCTCATCCCATCTTCATTCAttctttgttattgacagattaaaactgca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55277257 218 + 59248254 TCAGCCGAATTTGCATTTCCTTGTTATTAAAGCTCTTGAAAAACCCTGTTTATCTCAACTGGGCTTGGGGTGGAGGAGGAAGGGCGGGTTTGATGCCCTG-AAACAGG-AAGGTTGTGTCAAAATTAGCAAAATCCCTGAGCAGGGCAGAGAGCTGGCAGGGCTTCAATTCGCTCATCCCGTCTTCATTCAttctttgttattgacagattaaaactgca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47367578 216 + 51301725 tcagccgaatttgcatttccttgttaTTAAAGCTCTTGAAAAACCCCATTTATCTCAACTGGgcttggggtg--ggaggaagggcgGGTTTGATGCCCTG-AAACAGG-AAGGTTGTGTCAAAATTAGCAAAATCCCTGAGCAGGGCAGAGAGCTGGCAGGGCTTCAATTCGCTCATCCCgtcttcattcattctttgttATTGACAGATTAAAACTGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47073364 218 + 50890351 TCAGCCGAATTTGCATTTCCTTGTTATTAAAGCTCTTGAAAAACCCCGTTTATCCCAACTGGGCTTGGGGTGGAGGAGGAAGGGCGGGTTTGACGCCCTG-GAACAGG-AAGGTTGTGTCAAAATTAGCGAAGTCCCTGAGCAGGGCAGAGAGCTGGCGGGGCTTCCGTTCGCTCGTCCCGTCTTCATTCATTCTCTGTTCCGgacagattaaaaccgca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45595568 215 + 49145316 TCAGCCTAATTTGCATTTCTTTGTTATTAAGGCTCTTGGAAAACCTCATTTGTCT---CTGGGCTTGGGGTGGAGGAGGAAGGGTGGGTGTGAAACCCTA-AAACAGGAAAAGTTGTTTGAAAATCAGCAAAATCCCTGACCAGGACAGAGAGCTGGCAAGCCTTCAATTCGCTCCTC-CGTGCTTTCTCAttctttatgatcgacaaatcaaaactgca i calJac3.chr22 C 0 C 0 s canFam3.chr1 19763131 169 - 122678785 tcagccttaTTTCTACTTCCTTGTTTGTAACGCTCCTAAAAACCCCCGTCTGCCTCAGCTAGGCTGGCGGTGGAGGAAGAGGGGT---TTTGTAGTCCTGAAAACAGG-AAGGCAGCATCAAAGTTA-CAAAATCCCTCAggtg--------------------------------------------ttatgctatat-gttggcaaatt-gaactcca i canFam3.chr1 I 904 I 133 a score=493168.000000 s hg38.chr19_GL949747v2_alt 343464 195 + 729520 tgtatttaaggtgtacaacatgatgttttgatacaggtatacactgtggaatcgctgaatcaagctaattaatataacctcactttgcgtagttaattgttgtggtgagaacatttaaaatctgccctcttagtgattttcaagcatatgatacattgtgattaactgtagtcattgtgttgcacaatcctgaac s panTro4.chr19 59291037 195 + 63644993 tgtatttaaggtgtacaacatgatgttttgatacaggtatacactgtggaatcgctgagtcaagctaattaatataaccttactttgcgtagttaattgttgtggtgagaacatttaaaatctgccctcttagcgattttcaagcgtaggatacattgtgattaactctagtcattatgttgcacaatcctgaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56173464 195 + 60714840 tatatttaaggtgtacaacatgatgttttgatatagatatacactatggaatcgctgaatcaagctaattaatacaaccttactttgcgtagttaattattgtggtgagaacatttaaaatctgccctcttagcgattttcaagcatacgatacattgtgatttactctagtcattatgctgcacaatcctgaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102918482 195 - 106955855 tatgtttaaggtgcacaacgtgatattttgatatgggtatacactgtggaatcgctgaatcaagctaattaatataacctcactttgcctagttaatggttgtggtgagaacatttaaaatctgccctcttagccattttcaagcatacgatacattgtgattaactctagtcatcatgttgcacaatcctgaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60177471 194 + 64156825 tatattgcaggtgtacaacatgatgtgttggtacagatacacactgtggactcgctgaatcaagctaattcatataactttactttgcatagttaatttttgtggtgagaacatttaaaatctg-cctcttagtgattttcaagcatacaatacattgtgattaactctaatccttatgttgcacaatcctgaac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55277475 184 + 59248254 tatattgaaggtgtacaacatgatgtgttggtacagatacacactgtggactcgctgaatcaagctaattcatataaccttactttgca----taatttttgtggtgagaacatttaaaatctg-cctcttagcgattttcaagcatacgatacattgtgat------taatccttatgttgcacaatcctgaac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47367794 188 + 51301725 TATATtgaaggtgtacaacatgatgtgtCGGTACAGATATACACTGTGGAATCGCTGAATCAAGCTAATTCATATAACCTTACTTTGCATAGTtaatttttgtggtgagaacatttaaaatctg-ccTCTTAGAGATTTTCAAGCATACGATACATTGTGAT------TAATCCTTATGTTGCACAATCCTGAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47073582 194 + 50890351 tatgctgaaggtgtacaacatggtgcgttggtacagatacacgctgtggactcgctgaatcgagctaattcatataaccttactttgcagagttaatttttgtggtgagaacatttaaaatctg-cctcttagcgatttgcaagcatacgatacattgtgattaactctagtccttatgttgcacaatcctgaac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45595783 186 + 49145316 tctatgtcaggtccgcaacatgacgttttgatacaggtatacattgtggagtggctgaatcaggctaattagtataaccttagtttgcatagct--ttttcgcggtgagaacatttcaaatctgccctcttagcg------gagcatgcaacacattgtgattga-tccagtcaccacgtggcaccatcctcaac i calJac3.chr22 C 0 C 0 e canFam3.chr1 19763300 133 - 122678785 I a score=761456.000000 s hg38.chr19_GL949747v2_alt 343659 243 + 729520 ttactcttcctgtctagacgaaattttctatcctttgaccagcatctccccaaacccacccattTGTTCATTTTTCTTTCTTTTAACCATATCTCAGTTACTTATCAATCTGTTTAAAGACGTTTTTCATGGGCTGCTAATTCCACAAATGTGAGAAACACACACAGGATGCCTGCCGTTTGGAGGTGGACTTCCAGAAGGGAGGACCGGTATTGATCAAAGAATTGTCCAAATCTGCAGCTG s panTro4.chr19 59291232 243 + 63644993 ttactctccctgtctagacgaaattttctatcctttgaccagcatctccccaaacccacccattTGTTCATTTTTCTTTCTTTTAACCATATCTCAGTTACTTATCAATCTGTTTAAAGACGTTTTTCATGGGCTGCTAATTCCCCAAATGTGAGAAACACACACAGGATGCCTGCCCTTTGGAGGTGGACTTCCAGAAGGGAGGACCGGTATTGATCAAAGAATTGTCCAAATCTGCAGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56173659 243 + 60714840 ttactcttcctgtctagatgaaattttctatcctttaaccagcatctccccaaacccacccattTGTTCATTTTTCTTTCTTTTAACCATATCTCAGTTACTTATCAATCTGTTTAAAGACGTTTTTCATGAGCTGCTAATTCCACAAATGTGAGAAACACACACAGGATGCCTGCCCTTTGGAGGTGGACATCCAGAAGGGAGGACCGGTATTGATCAAAGAATTGTCCAAATCTGCATCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102918677 243 - 106955855 ttactcttcctgtctagacgaaattttctatcttttgaccagcatctccccaaacccgcccattTGTTCATTTTTCTTTCTTTTAACCGTATCTCAGTTACTTATCAATCTATTTAAAGACGTTTCTCATGGGCTGCTAATTTCACAAATGTGAGAAACACACACAGGATGTCTGCCCTTTGGAGGTGGACATCCAGAAGGGAGGACAGATATTGATCGAAGAATTGTCCAAATCTGCAGCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60177665 242 + 64156825 ttactcttcctgtctagacgaaattttctatcctttgaccagcatctccccaaACTCACCCATTTGTTCATTTTTCTTTCTTTTAACCATATCTCAGTTACTTATCAATCCGTTTAAAGATGCTTTTCATGGGCTGCTAATTCCACAAATGTGAGAAACACACACAGGGTGCCTGCCCTTTGGAGGTGGACGTCTAGAAGCGAGGACAGATACTGCTCCGAGAATTGTCC-AAACTGCAGCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55277659 242 + 59248254 ttactcttcctgtctagacgaaattttctatcctttgaccagcatctccccaaacccacccattTGTTCATTTTTCTTTCTTTTAACCATATCTCAGTTACTTATCAATCCGTTTAAAGATGCTTTTCATGGGCTGCTAATTCCACAAATGTGAGAAACACACACAGGGTGCCTGCCCTTTGGAGGTGGACGTCTAGAAGCGAGGACAGATACTGCTCCGAGAATTGTCC-AATCTGCAGCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47367982 243 + 51301725 TTACTCTTCCTGTCTAGATGAAATTTTCTATCCTTTGACCTGCATCTCCCCAAACCcacccatttgttcatttttctttcttttaaccaTATCTCAGTTACTTATCAATCCGTTTAAAGACGCTTTTCATGGGCTGCTAATTCCACAAATGTGAGAAACACACAGAGGGTGCCTGCCCTTTGGAGGTGGACATCTAGAAGGGAGGACAGATACTGCTCGGAGAATTGTCCAAATCTGCAGCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47073776 242 + 50890351 ttactctccctgtctagatgaaattttctatcctttgacctgcatctccccaaacccacccattTGTTCATTTTTCTTTCTTTTAACCATATCTCAGTGACTTATCAATCCGTTTAAAGACGCTTTTCATGGGCTGCTAATTCCACAAATGTGAGAAACACACAGAGGGTGCCTGCCCTTTGGAGGTGGACGTCTAGAAGGGAGGACAGATACTGCTCGGAGAATTGTCC-AATCTGCAGCTG i chlSab2.chr6 C 0 I 85 s calJac3.chr22 45595969 240 + 49145316 ttactccccctatctagctgaaattttgtatccttctgc---catctccccaaacccacccatttgtccatttctcgttcttttaaccatATCTCAGTTGCTTGTCAATCTGTTTAAAGACACTTTTCATGGGCTGCTGTTTCCACAAACGTGAGAGACACACACAGGATGCCCGCCCTTGGGCGGTGGACGTCTAGAAGGGAGGACAGAGACTGATGGAAGAATTGTGCAAAGCTGCAGCTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19763433 242 - 122678785 ttcttctttctttctccttccttccttccttccttccttccttccttccttccttccttccttccttccttccttccttccttcTACTGTATTTTAGC-ATCTATGTATCCATGTACAGATGCTCTccatgtgccactggttctacaaacatgagaaacacactcatgatccctgccttctcggggctgagagtattgagggaggacagacactcatcaaatacttgtctgagtccacagatg i canFam3.chr1 I 133 C 0 a score=18205.000000 s hg38.chr19_GL949747v2_alt 343902 6 + 729520 TGAACT s panTro4.chr19 59291475 6 + 63644993 CGAACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56173902 6 + 60714840 TGAACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102918920 6 - 106955855 TGAACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60177907 6 + 64156825 TGAACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55277901 6 + 59248254 TGAACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47368225 6 + 51301725 CAAGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3689488 6 - 50890351 CGAACT i chlSab2.chr6 I 15160 C 0 s calJac3.chr22 45596209 6 + 49145316 TGAACT i calJac3.chr22 C 0 I 1352 s canFam3.chr1 19763675 6 - 122678785 cagact i canFam3.chr1 C 0 C 0 a score=4500.000000 s hg38.chr19_GL949747v2_alt 343908 1 + 729520 g s panTro4.chr19 59291481 1 + 63644993 g i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56173908 1 + 60714840 g i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102918926 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60177913 1 + 64156825 G i rheMac3.chr19 C 0 I 73 s macFas5.chr19 55277907 1 + 59248254 G i macFas5.chr19 C 0 I 78 s papAnu2.chr19 47368231 1 + 51301725 G i papAnu2.chr19 C 0 I 77 s chlSab2.chr6 3689494 1 - 50890351 G i chlSab2.chr6 C 0 I 833 s calJac3.chr22 45597567 1 + 49145316 g i calJac3.chr22 I 1352 C 0 s canFam3.chr1 19763681 1 - 122678785 g i canFam3.chr1 C 0 I 146 a score=236861.000000 s hg38.chr19_GL949747v2_alt 343909 315 + 729520 acagagtcttgc-tctgtcacccaggatggagtgcagtggcgcgatctcagctcactgcaacctccgcctccaaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggtgcactccaccacgcccagctaatttttgtatttttagtagagacggggttt-cccccatgttgtccaggctggtctcaaacttctgacctcaagtgatccacccacctctgcctcccaaagtgctgggattacagatgtgagccaccgcacccagccTCATTGGTCATTTTTAAAATG-AATTATTTTTTTTC s panTro4.chr19 59291482 314 + 63644993 acagagtcttgc-tctgtcacccaggatggagtgcagtggcatgatctcagctcactgcaacctccgcctcccaggttcaagcaattcttctgcctcagcctcctgagtagctgggattacaggtgcactccaccacgcccagctaatttttgtatttttagtagagacggggttt-cccccatgttgtccaggctggtctcaaacttctgacctcaagtgatccgcccccctcggcctcccaaagtgctgagattacagatgtgagccaccgcgaccagccTCATTGGTCATTTTTAAAATG-AATTA-TTTTTTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56173909 315 + 60714840 acagagtcttgc-tctgtcgcccaggatggagtgcagtggcatgatctcagctcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggtgcacaccaccacgcccagctaatttttgtatttttagtagagacggggtttccccccatgctggccaggctggtctcaaactcccgacctcaagtgatccgcccccctcggcctctcaaagtgctgggattacagacgtgagccaccgcgcccagccTCATTGGTCATTTTTAAAATG-AGTTA-TTTTTTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102918927 315 - 106955855 acagagtcttgc-tctgtcggccaggctggagtgcagtggcatgatctcagctcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctcctaagtagctgggattacaggtgcacaccaccatgcccagctaatttttgtatttttagtagagatggggttt-cccccatgttggccaggctggtctcaaactcccgacctcaagtgatccgcccccctcggcctcccgaaatgctgggattacagacgtgagccactgcgcccagccTCATTGGTGATTTTTAAAATGAAATTA-TTTTTTTC i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45597568 296 + 49145316 acagagtttcacttttgttacccaggctggagtgcgatggcgccatctcggctcaccgcaacctccgcctcctgggttcaggcaattctcctgcctcagcctcctgagtagctgggattacaggcatgcgccaccatgcccagctaattattgtatttttagtagagacggggttt--caccatgttgaccaggatggtctcgatctcttgacctc--gtgatccacccgcctcagcctcccaaagtgctgggattataggggtgagccacctcgccgggcc--------------CAAAATG-GATTT-TTTTTT-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19763682 146 - 122678785 I e chlSab2.chr6 3689495 833 - 50890351 I e papAnu2.chr19 47368232 77 + 51301725 I e macFas5.chr19 55277908 78 + 59248254 I e rheMac3.chr19 60177914 73 + 64156825 I a score=58037.000000 s hg38.chr19_GL949747v2_alt 344224 38 + 729520 AAAATCAGCATGTGAGAAGAACCACCATATTGAGCGGC s panTro4.chr19 59291796 38 + 63644993 AAAATCAGCATGTGAGAAGAACCACCATATTGAGCGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174224 38 + 60714840 AAAATCAGCATGTGAGAAGACCCACCATATTGAGCGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919242 38 - 106955855 AAAATCAGCATGTGAGAAGGCCCACCATATTGAGCGGC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3818743 36 - 59248254 aaaaTCAGCATGTGAGATGGCCTG--ATGTTGAACAGA i macFas5.chr19 n 78 C 0 s papAnu2.chr19 3787314 36 - 51301725 aaaatcagcatgtgAGATGGCCTG--ATGTTGAAGAGA i papAnu2.chr19 I 9021 C 0 s calJac3.chr22 45597864 35 + 49145316 -AAATCGGCATGTGAGACAGCCCA--ATATTGAACAGA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19763828 36 - 122678785 aaaatcagtgtgtgaggaggtcca--gagttgaagggg i canFam3.chr1 I 146 C 0 e chlSab2.chr6 3689495 833 - 50890351 I e rheMac3.chr19 60177914 73 + 64156825 I a score=8907.000000 s hg38.chr19_GL949747v2_alt 344262 4 + 729520 ATAT s panTro4.chr19 59291834 4 + 63644993 ACAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174262 4 + 60714840 ATAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919280 4 - 106955855 ATAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3835480 4 - 64156825 ATAT i rheMac3.chr19 I 3368 C 0 s macFas5.chr19 3818779 4 - 59248254 ATAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3787350 4 - 51301725 ATAG i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45597899 4 + 49145316 ATAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19763864 4 - 122678785 aaat i canFam3.chr1 C 0 C 0 e chlSab2.chr6 3689495 833 - 50890351 I a score=171276.000000 s hg38.chr19_GL949747v2_alt 344266 56 + 729520 -GGAGTGTTTGAGAAAGCGAAAGAACCTGGAGGAATGTAGAGATGAGTGAGCCCCAG s panTro4.chr19 59291838 56 + 63644993 -GGAGTGTTTGAGAAAGCGAAAGAACCTGGAGGAATGTAGAGATGAGTGAGCCCCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174266 56 + 60714840 -GGAGTGTTTGAGAAAGCGAAAGAAGCTGGAGGAATGTAGAGACGAGTGAGCCCCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919284 56 - 106955855 -GGAGTGTTTGAGAAAGTGAAAGAACCTGGAGGAATGTAGAGATGGGTGAGCCCAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3835484 56 - 64156825 -GGAGTGTTCAAGAAAGTGAAAGAACCTGGAGGAATGTAGAGATGGGTGAGCCCAAA i rheMac3.chr19 C 0 I 5522 s macFas5.chr19 3818783 56 - 59248254 -GGAGTGTTCAAGAAAGTGAAAGAACCTGGAGGAATGTAGAGATGGGTGAGCCCAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3787354 56 - 51301725 -GGAGTGTTTGAGAAAGTGAAAGAACCTGAAGGAATGTAGAGATGGGTGAGCCCAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3690328 56 - 50890351 -GGAGTGTTTGAGAAAGTGAAAGAACCTGGAGGAATGTAGAGATGGGTGAGCCCAAA i chlSab2.chr6 I 833 C 0 s calJac3.chr22 45597903 55 + 49145316 -GGAGTGTTTGAGAAAGTGAAAGCAGCTGGAAG-ATGTAGAGATGAGTGAGCCCGAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19763868 47 - 122678785 ggtgttttttgagaaa--gaaaga----tgaggtatctggaggtaagtgagct---- i canFam3.chr1 C 0 C 0 a score=13752.000000 s hg38.chr19_GL949747v2_alt 344322 4 + 729520 GTCA s panTro4.chr19 59291894 4 + 63644993 GTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174322 4 + 60714840 GTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919340 4 - 106955855 GTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60177987 4 + 64156825 GTCA i rheMac3.chr19 I 73 C 0 s macFas5.chr19 3818839 4 - 59248254 GTCA i macFas5.chr19 C 0 I 8331 s papAnu2.chr19 3787410 4 - 51301725 GTCA i papAnu2.chr19 C 0 I 5657 s chlSab2.chr6 3690384 4 - 50890351 GTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45597958 4 + 49145316 GTCA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19763915 0 - 122678785 C a score=3600.000000 s hg38.chr19_GL949747v2_alt 344326 1 + 729520 C s panTro4.chr19 59291898 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174326 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919344 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60177991 1 + 64156825 C i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55277986 1 + 59248254 C i macFas5.chr19 I 78 C 0 s papAnu2.chr19 47368309 1 + 51301725 C i papAnu2.chr19 I 77 C 0 s chlSab2.chr6 3690388 1 - 50890351 C i chlSab2.chr6 C 0 T 3677 s calJac3.chr22 45597962 1 + 49145316 C i calJac3.chr22 C 0 C 0 e canFam3.chr1 19763915 0 - 122678785 C a score=485841.000000 s hg38.chr19_GL949747v2_alt 344327 168 + 729520 AGGGACAGGATGTGGCTGGGAAAATGGGCATGTCCAGACCAAAGAGAGGTGCACAGGTCTGATTCTATCTGAAGATAAACAGGGGAAGGGCTCTGAGAAAAAAAA-----AAAAAGATTTCATCTTACG-----------ATGAGATATTAAATGAAAATTTTTGAATACAATTTAAAAACTGT s panTro4.chr19 59291899 160 + 63644993 AGGGACAGGATGTGGCTGGGAAAATGGGCATGTCCAGACCAAAGAGAGGTGCCTGGATCTGATTCTATCTGAAGATAAACAGGGGAAGGGCTCTAAGAAAAAAAA-------------TTCATCTTACG-----------ATGAGATATTAAATGACAATTTTTGAATACAGTTTAAAAACTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174327 172 + 60714840 AGGGACAGGATGTGGCTGGGAAAATGGGCATGTCGAGACCAAAGAGAGGTACACGGGTCTGATTCTATGTGAAGATAAACAGGGGAAGGGTTCTGAGAAGAAAAA-AAAAAAAAAGATTTCATCTTACA-----------ATGAGATATTAAGTGAAAATTTTTTAATACAATTTAAAAACTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919345 173 - 106955855 AGGGACAGGATGTGGCTGGGAAAATGGGCATGTCCAGACCAAAGAGAGGTGCACGGGTCTGATTCTATCTGAAGATAAACAGGGGAAGGGCTCTaagaaaaaaaaaaaaaaaaaaGATTTCATCTTACA-----------ATGAGATGTTAAATGAAAATTTTTGAATACAGTTTAAAAACTGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60177992 161 + 64156825 AGGGACAGGATGTGGCTGGGAAAATGGGCATGTCCAGACCAAAGAGAGGTACACAGGTCTGATTCTATCTGAAGATAAACAGGGGAAGGGCTCTGAGAAAAAAAA------------ATTCATCTTACA-----------ATGAGATAGTAAATGAAAATTTTTGAATACAATTTAAAAACTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55277987 161 + 59248254 AGGGACAGGATGTGGCTGGGAAAATGGGCATGTCCAGACCAAAGAGAGGTACACAGGTCTGATTCTATCTGAAGATAAACAGGGGAAGGGCTCTGAGAAAAAAAA------------ATTCATCTTACA-----------ATGAGATAGTAAATGAAAAATTTTGAATACAATTTAAAAACGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47368310 160 + 51301725 AGGGACAGGATGTGGGTGGGAAAATGGGCAGGTCCAGACCAAAGAGAAGTACACAGGTCTGATTCTATCTGAAGATAAACAGGGGAAGGGCtctgag-aaaaaaa------------tttcatcttaca-----------atgagatattaaatgaaaaatttttaatacaatttaaaaacggT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47074103 161 + 50890351 AGGGACAGGATGTGGGTGGGAAAATGGGCATGCCCAGACCAAAGAGAGGTACACAGGTCTGATTCTATCTGAAGATAAACAGGGGAAGGGCTCTGAGAAAAAAAA------------ATTCATCTTACA-----------ATGAGATATTAAATGAAAAATTTTGAATACAATTTAAAAACGGT i chlSab2.chr6 I 85 C 0 s calJac3.chr22 45597963 165 + 49145316 AGGGACAGGATGTGGCTGGAAAAACCAGCATGTCCAGACCAGAGAGAGGGGCGTGGGTCTGATTCTACCTGAAGATAAACAGAGGAAGGGCTCTGAGGAAAAAAG--------GATGTTTAACCTTACA-----------ATGAGATATTAAAAGAAAAATTTTGAACACAATTTAAAAATTGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19763915 163 - 122678785 --ggacag--------tgtgaggatggacagatctagaccaaagagcagttcgtgGGTCTTATTTGATCTGAGCAGAGATGATGAAAGGACTCTAAAAATCTAAT-----------ATTTTGCCCCAAATAGAAAAAAATATGAAAAATAAATTCCAAAAATGTGAGTGAAATTTTAAAATTAT i canFam3.chr1 C 0 I 20 a score=593370.000000 s hg38.chr19_GL949747v2_alt 344495 207 + 729520 GGAAAGTACAATGGTCATGGTTGTGCTTTTGCAAATCGCCA-GTCCCTGGGGTCAGGAAGGGAGCAGGCAGCAGTGGCATGGACAGGCTGAGGCCGGCCTCGGGGAGCCACGGAGGGGAGAGGGGCTGTCACCTGGGGGTGATGCAGGAAAAGTCGATGAAGAGAGAGGGAAAGATGAGAAAAATTTAGAGTGAAATCACCAGGACTG s panTro4.chr19 59292059 207 + 63644993 GGAAAGTACAATGGTCATGGTTGTGCCTTTGCAAATCGCCA-GTCCCTGGGGTCAGGAAGGGAGCAGGCAGCAGTGGCATGGACAGGCTGAGGCCGGCCTCAGGGAGCCACGGAGGGGAGAGGGGCTGTCACCTGGGTTTGATGCAGGAAAAGTCGATGAAGAGAGAGGGAAAGATGAGAAAAGTTTAGAGTGAAATCACCAGGACTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174499 207 + 60714840 GGAAAGTACAATGGTCATGGTTGTGCTTTTGCAAATCGCCG-GTCCCTGGGGTCAGGAACGGAGCAGGCAGCAGTGGCATGGACAGGCTGAGGCCGGCCTCGGGGAACCACGGAATGGAGAGGGGCCGTCACCTGGGGATGACGCAGGAAAAGTCGATGAAGAGAGAGGGAAAGATGAGAAAAATGTAGAGTGAAATCGCCAGGACTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919518 207 - 106955855 GGAAGGTACAATGGTCATGGTTGTCCTTTTGCAAATCACAA-GTCCCTGGGGTCAGGAAGGGAGCAGGCAGCAGTGGCATGGACAGGCTGAGGCCGGCCTCGGGGAGCCATGGAGGGGACAGGGGCCGTCACCTGGGGGTGACGCAGGAAAAGTTGATGAACAGAGAGGGAAAGGTGAGAAAAATTTAGAGTGAAATCACCAGGACTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60178153 208 + 64156825 GGAAAGTACAATGGTCATGTCTGTGCTTTTGCAAATCACAGCGTCCCTGGGGTCAGGAAGGGAGCAGGCAGCAGTGGTATGGACAGGCTGCGGCCGGCCTCAGGGAGCCACGGAGGGGAGAGCGGCCACCACTGGGGGGAGACACAGGAAAAGTCAATGAAGAGAGAGGGAAAGATGAGAAAAACTGAGAGTGAAATCACCAGGACTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55278148 208 + 59248254 GGAAAGTACAATGGTCATGTCTGTGCTTTCGCAAATCACAGCGTCCCTGGGGTCAGGAAGGGAGCGGGCAGCAGTGGTATGGACAGGCTGCGGCCGGCCTCAGGGAGCCACGGAGGGGAGAGCGGCCACCACTGGGGGGAGACACAGGAAAAGTCAATGAAGAGAGAGGGAAAGATGAGAAAAACTGAGAGTGAAATCACCAGGACTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47368470 208 + 51301725 GGAAAGTACAATGGCCATGTCTGTGCTTTCGCAAATCGCAATGTCCCTGGGGTCAGGAAGGGAGCGGGCAGCAGTGGTATGGACAGGCTGCGGCCGGCCTCAAGGAGCCACGGAGGGGAGAGCGGCCACCACTTGGGGGAGACACAGGAAAAGTCaatgaagagagagggaaagatgagaaaaactgaGAGTGAAATCACCAGGACTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47074264 208 + 50890351 GGAAAGTACAATGGTCATGTCTGTGCTTTCGCAAATCACAACGTCCCTGGGGTCAGGAAGGGAGCGGGCAGCAGTGGCATGGACAGGCTGAGGCCGGCCTCGGGGAGCCACGGAGGAGAGAGCAGCCGTCACCGGGGGGAGACACAGGAAAAGTCAATGAAGAGAGAGGGAAAGATGAGAAAAATTGAGAGTGAAATCACCAGGACTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45598128 208 + 49145316 GGATGGTACAATGGTCATGTTTGTGCTTTCTCAAATCACAGTGTCCCCAGTGTCAGGAAGGGAGCGGGCAGCCGGGGCATGGACAGGCTGAGGCCGGCCTCGGGGAGCCGCGGAGGGGAGAGGTGCGGTCACTTGGGGCGGATGCAGGAAAAGTACATGAAGAGAGAGGGAAAGATGAGAAAAATCTGGAGTGAAATCACCAGGACTG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19764078 20 - 122678785 I a score=406956.000000 s hg38.chr19_GL949747v2_alt 344702 138 + 729520 GGTGACATG--GTGCATCCAGGAGGA---TGGAGAAGAGGATGAGTGTTCAGAGTCTGCCCTTTGTGACTGTCACGTTCCCCGCCAAGAAGCTGCCGAGTGAAGTG--TGGGCTCGTCTGGGGAAAAGTGCCGGGCTCAGCCTTG s panTro4.chr19 59292266 137 + 63644993 GGTGACAGG--GTGCATCCAGGAGGG---TGGAGAAGAGGATGAGTGTTCAGAGTCTGCCCTTTGTGACTGTCATGTTCCCCGCCAAGAAGCTGCCGAGTGAAGTG--TGGGCTCATCT-GGGAAAAGTGCCGGGTTCAGCCTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174706 138 + 60714840 GGTGATATG--ATGCATCTAGGGGGA---TGGAGAAGAGGATGAGTGCTCAGAGTCTGCCCTTTGTGACTGTCATGTTCCCCGCCAAGAAGCTGCCGAGTGAAGTG--TGGGCTCGTCTGGGGAAAAGTGCCGGGCTCAGCCTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919725 133 - 106955855 GGTGACATG--ATGCATCTAGGA--------GAGAAGAGGATGAGTGTTCAGAGCCTGCCCTTTGTGACTGTCATGTTCCCTGCCAAGAAGCTGCCGAGTGAAGTG--TGGGCTCGTCTGGGGAAAAGAGCCGGGCTCAGCCTTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60178361 138 + 64156825 GGTGACATG--ATGCATCTAGGAGGA---TGGAGAAGAGATGGAATGTTCAGAGTCTGCCCTTTGTGACTGTCGTGTTCCCCACCAAGAAGCTGCCGAGTGAAGTG--TGGGCTGGTCTGGGGAAAACTGCCGGGCTCAGCCTTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55278356 138 + 59248254 GGTGACATG--ATGCATCTAGGAGGA---TGGAGAAGAGATGGAATGTTCAGAGTCTGCCCTTTGTGACTGTCGTGTTCCCCACCAAGAAGCTGCCGAGTGAAGTG--TGGGCTGGTCTGGGGAAAACTGTCGGGCTCAGCCTTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47368678 137 + 51301725 GGTGACATG--ATGCATCTAGGAGGA---TGGAGAAGAGGTGGAATGTTCAGAGTCTGCCCTTTGTGACTGTCCTGTTCCCCGCCAAGAAGCTGCCGAGTGAAGTG--TGGGCTGGTCTGGGGAAAACTGCTGGGCTCAACCTT- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47074472 138 + 50890351 GGTGACATG--ATGCATCTAGGAGGA---TGGAGAAGAGATGGAATGTTCAGAGTCTGCCCTTTGTGACTGTCATGTTCCCTGCCAAGAAGTTGCCGAGTGAAGTG--TGGGCTGGTCTGGGAAAAACTGCTGGGTTCAACCTTG i chlSab2.chr6 C 0 I 326 s calJac3.chr22 45598336 138 + 49145316 GGTGACAGG--ATGCATCTAGGAGGA---TGGAGAAGAGGATGAGTCTTCAGAGTCTGCCCTTGGTGACTGTTGTATTCCCCGCCAAAGGGCTGCTGAGGGAAGCG--TGGGCTCATCTGGGGAAAGCTCCCGGGCTCAGCCTTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19764098 139 - 122678785 GGTGATGTGTTTTGTATCGAGGATGAAGTTGGGATCAAGGATGGTGTCTGGGACTTGGCACTTGACGACT---CTGCTCTCTGCCAAGGGGATGCTGAGAGGGGGGTCTGGGCTTGTGTGGG--AGAGCCCTGGGCTCAGCCTG- i canFam3.chr1 I 20 C 0 a score=5082.000000 s hg38.chr19_GL949747v2_alt 344840 3 + 729520 GTT s panTro4.chr19 59292403 3 + 63644993 GTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174844 3 + 60714840 GTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919858 3 - 106955855 GTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60178499 3 + 64156825 GTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55278494 3 + 59248254 GCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47368815 3 + 51301725 TTC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45598474 3 + 49145316 GTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19764237 3 - 122678785 GTC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47074610 326 + 50890351 I a score=34405.000000 s hg38.chr19_GL949747v2_alt 344843 11 + 729520 GTGTTGGGTTT s panTro4.chr19 59292406 11 + 63644993 GCGTTGGGTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174847 11 + 60714840 GTGTTGGGTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919861 11 - 106955855 GTGTTGGGTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60178502 11 + 64156825 GTGTTGGGTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55278497 11 + 59248254 GTGTTGGGTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47368818 11 + 51301725 Gtgttgggttt i papAnu2.chr19 C 0 I 320 s chlSab2.chr6 47074936 11 + 50890351 GTGTTGGGTTT i chlSab2.chr6 I 326 C 0 s calJac3.chr22 45598477 11 + 49145316 ATGTTGGATTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19764240 11 - 122678785 CTGCACAGTTC i canFam3.chr1 C 0 C 0 a score=17856.000000 s hg38.chr19_GL949747v2_alt 344854 5 + 729520 GAATT s panTro4.chr19 59292417 5 + 63644993 GAATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174858 5 + 60714840 GAATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919872 5 - 106955855 GAATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60178513 5 + 64156825 GAATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55278508 5 + 59248254 GAATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47369149 5 + 51301725 GAATT i papAnu2.chr19 I 320 C 0 s chlSab2.chr6 47074947 5 + 50890351 GAATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45598488 5 + 49145316 GAATC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19764251 5 - 122678785 TAATT i canFam3.chr1 C 0 I 25 a score=767772.000000 s hg38.chr19_GL949747v2_alt 344859 284 + 729520 CTCATTGTGgaaatcggtgtgcggagctgacccctgcactcccagggtgaccgcagcgctactcacagccgccaagacctggcaagaacctgag-----tgcccaccaccaaatgaatggatgaggagaatgtgctgtgtatatgcaatggaatattattcagccctaaaaaaggaaggacattctgtcattcgcaacaacatggatgaacca------------------------------------------------gaggacgttaggctaagtgaaataagccgggcacagaaagaca---attactgcgcgttctcacttatctgtggaatct s panTro4.chr19 59292422 289 + 63644993 CTCATTATGgaaatctgtgtgtggaggtgacgcctgcactcccagggtgaccgcagcgctactcacagctgccaagacctggaaataacctgagttatataaccaccaccaaatgaatggatgaggagaatgtgctgtgtatatgcaatggaatattattcagccctaaaaaaggaaggacattctgtcattcgcaacagcatggatgcacca------------------------------------------------gaggacattatgctaagtgaaataagccgggcacagaaagaca---attactgcatgatctcacttatctgtggaatct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174863 283 + 60714840 CTCATTGTGgaaatcggtgtgtggaggtgacacctgcactcccagggtgaccgcagcgctacttacagccaccaagatctggaaataa-ctgag-----tgtccatcaccaaatgaatggatgaggagaatgtagtgtgtatatgcaatggaatattattcagccctaaaaaaggaaggacattctgtcattcgcaacaacatggataaacca------------------------------------------------gaggacgttaggctaagtgaaataagccaggcacagaaagaca---attactgcatgatctcacttatctgtggaatct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919877 337 - 106955855 CTCATTGTGgaaataggtgtgtggaggtgacacctgcactcccagggtgaccgcagcgctactcacagccgccaagacctggaaataacgtgagttatataaccaccaccaaatgaatggatgaggagaatgtggtgtgtatatgcaatggaatattattcagccctaaaaaaggaaggacattctgtcattcgcaacaacatggatgaaccagaggacgttatgctaagtgaaataagctgcaacaacatggatgaaccagaggacgttatgctaagtgaaataagctgggcacagaaagaca---attactgcatgatctcacttatctgtggaatct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60178518 287 + 64156825 CTCGTTGTAgaaatcggtgtgtggaggtgacgcctgcactctcagggtgaccgcagagctactcacagctgccaagacctggaagtaacttgag-----tgtccactgccaaatgaatggatgaggaaaatgtggtgtgtctatgcaatggaatattattcagccctaaaaaaggaaggacgttgtatcatttgcaacaacatggatgaacca------------------------------------------------gaggacactgtgttaagtgaaataagccgggcacagaaagacaattattactgcatgatctcacttatctgtggaatct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55278513 287 + 59248254 CTCGTTGTAgaaatcggtgtgtggaggtgacgcctgcactcccagggtgaccgcagagctactcacagctgccaagacctggaagtaacttgag-----tgtccactgccaaatgaatggatgaggaaaatgtggtgtgtctatgcaatggaatattattcagccctaaaaaaggaaggacgttgtatcatttgcaacaacatggatgaacca------------------------------------------------gaggacattgtgttaagtgaaataagccgggcacagaaagacaattattactgcatgatctcacttatctgtggaatct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47369154 287 + 51301725 CTCATTATGGAAATCGGTGTGTGAAGGTGATGCCTGCACTCCCAGGGTGACCACAGAGCTACTCACAGCTGCCAAGACCTGGAAGTAACTCGAG-----TGTCCATTGCCAAATGAATGGATGAGGAAAATGTGGTGTGtctatgcaatggaatattattcagccctaaaaaaggAAGGACGTTGTAtgatttgcaacaacatggatgaacca------------------------------------------------gaggacattgtgctaagtgaaataagccaggcacagaaagacaattattactgcatgatcttacttatctgtggaatct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47074952 287 + 50890351 CTCATTGTGgaaatcggtgtgtggaggtgacgcctgcactcccagggtgaccgcagagctactcacagctgccaagacctggaagtaactcgag-----tgtccactgccaaatgaatggatgaggaaaatgtggtgtgtctatgcaatggaatattattcagccctaaaaaaggaaggacgttgtatcattcgcaacaacatggatgaacca------------------------------------------------gaggacattgtgctaagtgaaataagccaggcacagaaagacagttattactgcatgatctcacttatctgtggaatct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45598493 268 + 49145316 ACCATTGTGgaaatcggagtgtggcagtgacgcctgcactcctgtgatgactgcggcatgacccacagcagccaagacgtggaaataacctgag-----cgtccacccgcaaaggaatggataaggaaaatgtggtgtgcatatgcaatggaatattatacagccc-agaaaaagaaggatgttctgtcattc-caacaacatggatgaactg------------------------------------------------gaggatattaccctaagtgaaataagccgggcacagaaagcca---aacgccgca--------------tgtggaatct i calJac3.chr22 C 0 I 304 e canFam3.chr1 19764256 25 - 122678785 I a score=964963.000000 s hg38.chr19_GL949747v2_alt 345143 367 + 729520 aagaaaagttgatcacccggaagc--agagtagaatggtggttattggaggctgcaggtgc----ggggcatgggagagacactgatcaaatgatacaaagtttcgagtagccaggacgagtgaatttttcagatctatggcacagcagaatgacagtagttcataataatttattgtatatttcaaaattgctaaaaggagatttaaaatattctcat-----cacaataagtatgtgatggggctgatatgttaatcagctttatttaatctttccacaatgtgtacatacgtcataatatcacactgtaccccgcaaat---tgcaattatttgtcaattaaaaataaaaTTT-----TTGAAAATAAGAAAAGCAAAATAAG s panTro4.chr19 59292711 369 + 63644993 aaaaaaagttgatcacccggaagcagagagtagaatggtggttactggaggctgcgggtgc----ggggcatgggagagacactgatcaaatgatacaaagtttcgagtagccaggacgagtgaatttttcagatctatggcacagcagaatgacaatagttcataataatttattgtatatttcgaaattgctaaaaggagatttaaaatattctcat-----cacaataagtatgtgatggggctgatatgttaatcagctttatttaatctttccacaatgtgtacatacgtcataatatcacactgtaccccgcaaac---tgcaattatttgtcaattaaaaataaaaTTT-----TTGAAGATAAGAAAAGCAAAATAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56175146 371 + 60714840 aaaaaaagttgatcacacggaagtagagagtagaatggtggttactggaggctgcaggtgc----agggcatgggggagacaccgatcaaatgatacaaagtttcaactagcccggaggagtgactttttcagatctatggtacagcagaatgacagtagttcataataatttattgtatatttcaaaattgctaaaaggagatttaaaatattctcac---aataaaataagtatgtgatggggctgatatgttaatcagctttatttaatctttccgtaatgtgtacatacgtcataatatcacactgtaccccacaaac---tacaattatttgtcaatcaaaaataaaaTTT-----TTGAAAATAAGAAAAGCAAAATAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102920214 374 - 106955855 gaaaaaagttgattacagggaagtagggagtagaatggtggttactggaggctgcaggtgc----ggggcatgggagagacactgatcaaatgatacaaagtttcaactagccaggaggagtgaatttttcagatctgtggcacagcagaatgacaatagttcataataatttattgtgtatttcaaaattgctaaaaggagatttaaaatattctcatcacaataaaataagtatgtgatggggctgatatgttaatcagctttatttaatctttccacaatgtgtacatacgtcataatatcacactgtaccccgcaaac---tacaattatttgtcaattaaaaataaaaTTT-----TTGAAAATAAGAAAAGCAAAATATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60178805 378 + 64156825 aagaaaagttgatcacacggaagtagagagtagaatggtggttactggaggctgcagggcctccagtaatatgggagagacactgatcaaatgatacagagtttcaactagccaggaggagtgagtttttcagatctgttgcacagcaga---acaatagttcataataatttattgtatatttcaaaagtactaaaaggagatttaaaatattctcatcacaataaaataagtatgtgatgggactgatatgttaatcagctttatttaatctttccaccatgtgtacacacgtcatcagatcacaatgtacccttcaaacatatacaattatttgtcaattaaaaataaaaTTT-----TTGAAAATAAGAAAGGCAAAATAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55278800 378 + 59248254 aagaaaagttgatcacacggaagtagagagtagaatggtggttactggaggctgcagggcctccagtaatatgggagagacactgatcaaatgatacagagtttcaactagccaggaggagtgagtttttcagatctgttgcacagcaga---acaatagttcataataatttattgtatatttcaaaagtactaaaaggagatttaaaatattctcatcacaataaaataagtatgtgatgggactgatatgttaatcagctttatttaatctttccaccatgtgtacacacgtcatcagatcacaatgtacccttcaaacatatacaattatttgtcaattaaaaataaaaTTT-----TTGAAAATAAGAAAGGCAAAATAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47369441 377 + 51301725 aagaaaagTTGATCGCacggaagtagagagtagaatggtggttactggAGGCTGCAGGGCCTCCAGTAATATGGGAGAGACACTGATCAAATGATACAAAGTTTCAACTAGCCAGGAGGAGTGAGTTTTTCAGATCTGTTGCACAGCAGA---ACAATAGTTCATAATAATtgattgtatatttcaaaagtactaaaaggagattttaaatatgctcatcacaataaaataagtaTGTGATGGGACTGATATGTTAATCAGCTTTATTTAATCTTTCCACCATGTGTACACACGTCATCATACCACAATGTACCCTTcaaacatatacaattatttgtcaattaaaaattaaattt-----ttgaaaataagaaaggcAAAATAA- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47075239 378 + 50890351 aagaaaagctgatcacacagaagtagagagtagaatggtggttactggaggctgcagggcctccagtaatatgggagagacactgatcaaatgatacaaagtttcaactagccaggaggagtgagtttttcagatctgttgcacagcaga---acaatagttcataataatttattgtatatttcaaaagtactaaaaggagatttaaaatattctcatcacaataaaataagtatgtgatgggactgatatgttaatcagctttatttaatctttccaccatgtgtacacacgtcatcatatcacaatgtacccttcaaacatatacaattatttgtcaattaaaaataaaaTTT-----TTGAAAATAAGAAAGGCAAAATAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45599065 365 + 49145316 aaaaaaagtc-atctcacagaggtagagagtagagtaatgg-tattagaggctggaggtgg----aggccttgggagagacgctg-----atgaggaggagtttcgatgagacaggaggaggaagttttgc-ggtctattgcacagcaggctgacgagagttaagaatcacttattatatacttcaaaattgctaaaagtaggttttgaatgttctcat-----cacaataagtatgtgatgtgattggtatgttagctatccttatttaatctgtccacaatgtttacatccgctgtaacatcacattgtaccccacaaacatacataa----ttgtcaattaaaaataagaTTTGTCAGTTAAAAATAAGAAAAGCAAAATATG i calJac3.chr22 I 304 C 0 e canFam3.chr1 19764256 25 - 122678785 I a score=178735.000000 s hg38.chr19_GL949747v2_alt 345510 67 + 729520 ACAGGTGGAGGATGCGAGAGAGAACTGGGTGAGGGTTGGTTATGCATTTTACATTTGGAAGAGTTTG s panTro4.chr19 59293080 67 + 63644993 ACAGGTGGAGGATGCGAGAGAGAACTGGGTGAGGGTTGGTTATGCATTTTACATTTGGAAGAGTTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56175517 67 + 60714840 ACAGGTGGAAGATGCGAGAGAGAACTGGGTGAGGGTTAGTTATGCATTTTACATTTGGAAGAGTTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102920588 63 - 106955855 ACAGGTGGAGGATGCGAGAGAGAACTGGGTGAGG----GTTATGCATTTTACATTTGGAAGAGTTTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60179183 63 + 64156825 ACAGGTGGAGGATGCGAGAGAGAACTGGGTGAGG----GTTATGCATTTTACATCTGGAATAGTTTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55279178 63 + 59248254 ACAGGTGGAGGATGCGAGAGAGAACTGGGTGAGG----GTTATGCATTTTACATCTGGAATAGTTTG i macFas5.chr19 C 0 I 327 s papAnu2.chr19 47369818 56 + 51301725 -------GAGGATGCGAGAGAGAACTGGGTGAGG----GTTATGCATTTTACATTTGGAATAGTTTG i papAnu2.chr19 C 0 I 349 s chlSab2.chr6 47075617 63 + 50890351 ACAGGTGGAGGATGCGAGAGAGAACTGGGTGAGG----GGTATGCATGTTACATTTGGAATAGTTTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45599430 63 + 49145316 ACAGGCGGAGAATAAAGGAGAGAAAGGGGTGAGG----GCAGCGCATTTCCCATGTGGAATCGTTTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19764281 54 - 122678785 ACAGGTGGGGAATA-GGGAGAGAGTT-TGCAAGG----GTCA-------TACATTGGCGATTGTTTG i canFam3.chr1 I 25 C 0 a score=1190879.000000 s hg38.chr19_GL949747v2_alt 345577 382 + 729520 CAATCTAGGGTATATTTAAAGGGATCTCTCCAGGCCCTCTAAGAATCAACATCACTCCCACCCAGCACTGCCCTTGGGGTGACAGAGGGGACTGGGAAGACGGGACGAAGGCATGACTTACCCTCCTGCGTGTGGATGGTCTGGGCCAGGCAGAGCACTGGAAGAGAAGCCCCAGTGAGAAAAATGCCCAGTGCCCAGTCTCCTTACGGGGCTGCTGTCAAAAGGGGGCTCGATGGAGCTGGGGGGCATTCAGCATTTCATAACGACCAAGCCAACCCTCCTCGACATCACTGTCTCCATGTAATCCTTCTTGCTGCAAAATGGTTTCAAGATAAATCCCAAAGTCTCCTCCTCCAAAAAGGCTCCT-GCTCCCCCAGCCCTT s panTro4.chr19 59293147 382 + 63644993 CAATCTAGGGTATATTTAAAGGGATCTCTCCAGGCCCTCTAAGAATCAACATCACTCCCACCCAGCACTGCCCTTGGGGTGACAGAGGGGACTGGGAAGACGGGACGAAGGCATGACTTACCCTCCTGCGTGTGGATGGTCTGGGCCAGGCAGAGCACTGGAAGAGAAGCTCCAGTGAGAAAAATGCCCGCCGCCCAGTCTCCTTACGGGGCTGCTGTCAAAAGGGGGCTCGATGGAGCTGGGGGGCATTCAGCATTTCATAACGACCAAGCCAACCCTCCTCGACATCACTGTCTCCATGTAATCCTTCTTGCTGCAAAAGGGTTTCAAGATAAATCCCAAAGTCTCCTCTTCCAAAAAGGCTCCT-GCTCCCCCAGCCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56175584 382 + 60714840 CAATCTAGGGTATATTTAAAGGGATCCCTCCAGGCCCTCTAAGAATCAACATCACTCCCACCCAGAACTGCCCTTGGGGTGACAGAAGGGACTGGGAAGACGGGACAAAGGCATGACTTACCCTCCTGCGTGTGGATTGTCTGGGCCAGGCAGAGCACTGGAAGAGAAGCTCCAGTGAGAAAAATGCCCACCACCCAGTCTCCTTATGGGGCTGCTATCAAAAGGGGGCTCGATGGAGCTGGGGGGCATTCAGCATTTCATAACGACCAAGCCAACGCTACTCGACATCACTATCTCAGTGTAATCCTTCTTGCTGCAAAATGGTTTCAAGATAAATCCCAAAGTCTCCTCTTCCAAAAAGGCTCCT-GCTCCCCCAGCCCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102920651 381 - 106955855 CAATCTAGGGTATATTTAAAGGGATCCCTCCGGGCCCTCTAAGAATCGACATCACTCCCACCCAGAACTGCCCTTGGGGTGACAGAGGGGACTGGGAAGACGGGACGAAGATGTGACTCACCCTCCCGCGTGTTGATCGTCTGGGCCAGGCAGAGCACTGGAAGAGAAGGTCCAGTGAGAAAAATGCCCACCACCCAGTCCCCTTACAGGGCTGCTAACAAAAGGGGGCTCGATGCAGCTGGGGGGCATTCAGCATTTCATAACGACCAAGCCAACCCTCCTCGACAGCACTAGCTCAGTGTAATCCTTCTTGCTGCAAAATGGTTTCAAGATAAATCCCAAAGTCTCCTCTTCCAAAAAGGCTCCT-GC-CCCCCAGTCCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60179246 380 + 64156825 CAATCTAGGGTATACTTAAAGGGGTCCCTCC-GGCCCTCTAAGCATCAACATCGCTCCCACCCAGGACTGCCCTTGGGGTGCCAGAGGGGACGGGGAAGACGGGACGAAGGTGTGACTCACCCTCCTGCGCGTGGATCGTCTGGGCCAGGCAGAGCACTGCAAGAGAAGCCCCAGTGAGAAAAATG-CCACCACCCAGTCTCCTTACGGGGCTGCTATCGAAAGGGGGCTGGATGGAGCTGGGGGGCATTCAGCATTTCATCAGGACCAAACCAACCCTCCTCGACATCGCTATCTCGGTGCAATCCTTCTTGCTGCAAAATGGTTTCAAGATAAATCCCAAAGTCTCCTCTTCCAAAAAGGCTCCT-GCTCCCCCAGCCCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55279568 381 + 59248254 cAATCTAGGGTATACTTAAAGGGGTCCCTCCAGGCCCTCTAAGCATCAACATGACTCCCACCCAGGACTGCCCTTGGGGTGCCAGAGGGGACGGGGAAGACGGGACAAAGGTGTGACTCACCCTCCTGCGCGTGGATCGTCTGGGCCAGGCAGAGCACTGCAAGAGAAGCCCCAGTGAGAAAAATG-CCACCACCCAGTCTCCTTACGGGGCTGCTTTCAAAACGGGGCTGGATGGAGCTGGGGGGCGTTCAGCATTTCATCAGGACCAAACCAACCCTCCTCGACATCGCTATCTCGGTGCAATCCTTCTTGCTGCAAAATGGTTTCAAGATAAATCCCAAAGTCTCCTCTTCCAAAAAGGCTCCT-GCTCCCCCAGCCCTT i macFas5.chr19 I 327 C 0 s papAnu2.chr19 47370223 381 + 51301725 caatctagGGTATACTTAAAGGGATCCCTCCAGGCCCTCTAAGTATCAACATGACTCCCACCCAGAACTGCCCTTGGGGTGCCAGAGGGGACGGGGAAGACGGGACGAAGGTGTGACTCACCCTCCTGCGTGTGGATCGTCTGGGCCAGGCAGAGCACTGCAAGAGAAGCCCCAGTGAGAAAAATG-CCACCACCCAGTCTCCTTACGGGGCTGCTATCGAAAGGGGGCTGGATGGAGCTGGGGGGCGTTCAGCATTTCATCATGACCAAACCAACCCTCCTCGACATCGCTATCTCAGTGCAATCCTTCTTGCTGCAAAATGGTTTCAAGATCAATCCCAAAGTCTCCTCTTCCAAAAAGGCTCCT-GCTCCCCCAGCCCTT i papAnu2.chr19 I 349 C 0 s chlSab2.chr6 47075680 381 + 50890351 CAGTCTAGGGTATATTTAAAGGGATCCCTCCAGGCCCTCTAAGCATCAACATCGCTCCCACCCAGAACTGCCCTTGGGGTGCCAGAGGGGACGGGGAAGACGGGACAAAGGTGTGACTCACCCTCCTGCGTGTGGATCATCTGGGCCAGGCAGAGCACTGCAAGAGAAGCCCCAGTGAGAAAAATG-CCACCACCCAGTCTCCTTACGGGGCTGCTATCAAAAGGGGGCTGGATGGAGCTGGGGGGCGTTCAGCATTTCATCATGACCAAACCAACCCTCCTCGACATCACTAGCTCAGTGTAATCCTTCTTGCTGCAAAATGGTTTCAAGATAAATCCCAAAGTCTCCTCTTCCAAAAAGGCTCCT-GCTCCCCCAGCCCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45599493 379 + 49145316 CAATCTAGGGCACATTT-CAGGGATCCCTCCGGGCCCTCTGAGAATCAACTTCACTCCCACCCAGAACTGCCCTTGGGGT-ACAGAGGGGACTGGGGAGACGGGATGAAGACGGGACTCACCCTCCTGTGTGCGGATCATCTGGGCCAGGCAGAGCACTGGAAGAGAAGCCGCAGTGAGAGAAATGCCCACCGCCCAGTCCTCACACGGGGCTGCTATCAAAAGGAGGCTCCATGCAGCT-GGGCACATTCAGCATTTCATAATGACCAAACCGCCCCTCCTCCACATCACTGTCTGAGTATAATCCTTCTTGCTGCAAACTGGTTTCAAAATAAATCCCAAAGTCTCCTCTTCCAAAAAGGCTCCT-GCTCCCCAAGCCCtt i calJac3.chr22 C 0 I 287 s canFam3.chr1 19764335 282 - 122678785 CAATTTGGGGCAAATTTCAGGGCCTCCTCCCAGGCCCTCCCAGGGTCAGCACCA-TCCTGTCCAGAGCTGCCTTTGGGATG-CAAAGAGGATGAGGAGGA--------------GACTCACCCTGCTGTGCGTGGAGCCCTCCACCCAGGCAGAGCGCTGAAAGAGAGGATCTGGTGAGAGAGAGA-CCACT-CCCAGTTCCATCA-----------------------------------GGGGCCACCC--CAGTCCAT---------------------------------------------CTTCTTGCTCTGAAATAGTCTCAAGACAAGCCCC-CGGCCCCCTCTTCCAAATAGGTGCTTCTCTCCCCCAGCCCCT i canFam3.chr1 C 0 C 0 a score=802867.000000 s hg38.chr19_GL949747v2_alt 345959 259 + 729520 CTTAAAGCTGACCTCATCCCCACACCCGGGCCCCTGTTTTTAGGACAAGATCTTCTCTGATCAGACTTAGGC--CCCAGGGAGAGCAGCAGGGCAGTCTTGGGAGGAGGAGGACACTTTCCT----CCCCAGAATCTTCTGGACTAGAGTCAGGCTTGAGCAGGGAA---------TTTTCCAGACCTCCCGACCCCCTTTCCAG-CCTCCCGGCTGC----------CTCCAGGACTCACCTAGGCCCAGGAGGGCGGTGGGGTGGGGAGACATGGCCCAGGTC s panTro4.chr19 59293529 259 + 63644993 CTTAAAGCTGACCTCATCCCCACATCCAGGACCCTGTTTTTAGGACAAGATCTTCTCTGATCAGACTTAGGC--CCCAGGGAGAGCAGCAGGGCAGTCTTAGGAGGAGGAGGACACTTTCCT----CCCCAGAATCTTCTGGACTAGAGTCAGGCTTGAGCAGGGAA---------TTTTCCAGACCTCCCGACCCCCTTTCCAG-CCTCCCGGCTGC----------CTCCAGGACTCACCTAGGCCCAGGAGGGCGGTGGGGTGGGGAGACATGGCCCCGGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56175966 236 + 60714840 CTTAAAGCTGACCTCATCCCCACACCCAGGACCCTGTTTTTAGGACAAGGTCTTCTCTGATCAGACTTAGGC--CCCGGGGAGAGCAGCAGGG----------------------CTTTCCT----CCCCAGAATCTTCTGGACTAGACTCAGGCTTGAGCAGGGAA---------CTTTCCAGACCTCCCAACCCCCTTTCCAG-CCTCCCTGCTGC----------CTCCAGGACTCACCTAGGCCCAGGAGGGCGGTGGGGT-GGGAGACATGGCCCCGGTC i ponAbe2.chr19 C 0 M 316 s nomLeu3.chr10 102921032 258 - 106955855 CTTGAGGCTGACCTCATCCCCACACTCAGGACCCTGTTTTTAGGACAAGGTCGTCTCTGATCAGACTTAGG---CCCGGGGAGAGCAGCAGGGCAGTCTTGGGAGGAGGAGGACACTTTCCC----CCCCAGAATCTTCTGGACTAGAGTCAGGCTTGAGCAGGGAA---------CTTTCCAGACCCCCTGACCCCCTTTCCAG-CCTCCCCGCTGC----------CTCCAGGACTCACCTAGGCCCAGGAGGGCGGTGGGGTGGGGAGACATGGCCCCGGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60179626 258 + 64156825 CTGAAAGCTGACCTCATCCCCATACCCGGGTCCCTGTTTTTAGGACAAGGTCTTCTCTGGTCAGACTTAGGC--CCCGGGGAGAGCAGCAGGGCAGTCTTGGG-GGAGGAGGACACTTTCCT----TCCCAGAATCTTCTGCACTGGAGTCAGGCTTGAGCAGGGAA---------CTCTCCAGACCTCCCGACCCCCTTTCCAG-CCTCCCCGCTGC----------CTCCAGGACTCACCTAGGCCCAGGAGGGCGGTGGGGTGGGGAGACATGGCCCCGGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55279949 258 + 59248254 CTTAAAGCTGACCTCATCCCCATACCCGGGTCCCTGTTTTTAGGACAAGGTCTTCTCTGGTCAGACTTAGGC--CCTGGGGAGAGCAGCAGGGCAGTCTTGGG-GGAGGAGGACACTTTCCT----TCCCAGAATCTTCTGCACTGGAGTCAGGCTTGAGCAGGGAA---------CTTTCTAGACCTCCCGACCCCCTTTCCAG-CCTCCCCGCTGC----------CTCCAGGACTCACCTAGGCCCAGGAGGGCGGTGGGGTGGGGAGACATGGCCCCGGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47370604 258 + 51301725 CTTAAAGCTGACCTCATCCCCACACCCAGGCCCCTGTTTTTAGGACAAGGTCTTCTCTGATCAGACTTAGGC--CCCGGGGAGAGCAGCAGGGCAGTCTTGGG-GGAGGAGGACACTTTCCT----TCCCAGAATCTTCTGCACTGGAGTCAGACTTGAGCAGGGAA---------CTTTCCAGACCTCCCGACCCCCTTTCCAG-CCTCCCCGCTGC----------CTCCAGGACTCACCTAGGCCCAGGAGGGCGGTGGGGTGGGGAGACATGGCCCCGGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47076061 258 + 50890351 CTTAAAGCTGACCTCATCCCCACACCCAGGCCCCTGTTTTTAGGACAAGGTCTTCTCTGGTCAGACTTAGGC--CCCGGGGAGAGCAGCAGGGCAGTCTTGGG-GGAGGAGGACACTTTCCA----TCGCAGAATCTTCTGCACTGGAGTCAGGCTGGAGCAGGGAA---------CTTTCCAGACCTCCCGACCCCCTTTCCAG-CCTCCCCGCTGC----------CTCCAGGACTCACCTAGGCCCAGGAGGGCGGTGGGGTGGGGAGACATGGCCCCGGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45600159 255 + 49145316 CTTAAAGCTGACCTTATCCCCACACCCAGGTCCCTGTTTTTAGGACAAGGTCTTCTCTGGTCCGACTTAGGC--CCCAGGGAG---AGCAGGGCAGTCTTGGG-GGAGGAGGACAC-TTCCC----CCCTAGAATCCTCAGGACTGGAGTCAGGCTTGAGCAGGGAA---------CTTTTCAGACCTCCCAACCCCCTTTCCAGTCCTCCCTGCTGC----------CTCCAGGACTCACCTAGGCCCAGGAGGGCGGTGGGGTGGGGAGACATGACCCCAGTC i calJac3.chr22 I 287 C 0 s canFam3.chr1 19764617 260 - 122678785 CTGGAGTCTGAATTAATCTCTG---------------TTCTAGAACTGAACCCAC-ATGGTCTGACCTAGGTTGTCTGGGGCAGGAGGTAGGGTGTT-------GACCTACTTCACTCCCCCAGGATCCTGGAGTCTTCTGGACTGGGGGCAGGACTGGGAAGGGAAGCAGGCCCCCTCCCCAAATCTTCTGCCCACTCACGCTG-TCCCCCTAACCCTTTATTTCCATTTCAGGACTCACTGAGGGCCAGGAAGGTGGTCACATGGGGAAACATG-CCGAGATC i canFam3.chr1 C 0 C 0 a score=618629.000000 s hg38.chr19_GL949747v2_alt 346218 217 + 729520 CCAGCAGTGCAGCCTGGCCTGAGGCGCACCAATGCA-AGGACAGAACTCTGCAGCAGACACAAGCAGACAGGATGTGCTGCCCGGGGGCCTCCTGCCTATGGGGCTTCCACAGCAACTGCCTCACAC-AAGAGGAAGAGCTTTCTGTCCTGTTCTTTCCACCCTTCCCACTAGTGAGACGAGAGGGAGGGCCTTGGTTTCTGAAAAATGTCGCTTACCC s panTro4.chr19 59293788 217 + 63644993 CCAGCAGTGCAGCCTGGCCTGAGGCGCACCAATGCA-AGGACAGAACTCTGCAGCAGACACAAGCAGACAGGATGTGCTGCCCGGGGGCCTCCTGCCTATGGGGCTTCCACAGCAACTGCCTCACAC-AAGAGGAAGAGCTTTCTGTCCTGTTCTTTCCACCCTTCCCACTAGTGAGACGAGAGGGAGGGCCTCGGTTTCTGAAAAATGTCGCTTACCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4398759 177 - 60714840 ----------------------------------------TCAGAACTCTGCAGCAGACACAAGCGGACAGGATGTGCTGGCCAGAGGCCTCCTGCCTATGGGGTTTCCACAGCAACTGCCTCACAC-AAGAGGGAGAGCTTTCTGTTCTGTTCTTTCCACCCTTCCCACTAGTGAGATGAGAGGGAGGGCCTTGGTTTCTGAAAAACGTCGCTTACC- i ponAbe2.chr19 n 0 C 0 s nomLeu3.chr10 102921290 217 - 106955855 CCAGCAGTCCGGCCTGGCCTGGGGTGCACCAGTGCA-AGCAGAGAACTCTGCAGCAGACACAAGCGGACAGGATGTGCTGGCGAGGGGCCCCCTGCCTATGGGGCTTCCACAGCAACTGCCTCACAC-AAGAGGAAGAGCTTTCTGTCCTGTTCTTTCTACCCTTCCCACTAGTGAGACGAGAGGGAGGGCCTTGGTTTCTGAAAAATGTCGCTTACCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60179884 217 + 64156825 CCAGCAGTCCGGCCTGGCCTGGGGTGCACCAGTGCA-AGGACAGAACTCTGCAGCAGACACAAGCTGACAGGATGTGCTGGCCAGGGGCCTCCTGCCTGTGGGGTTTCCACAGCAGCTGCCTCACAC-AAGAGGAAGAGCTTTCTGTCCTGTTCTTTCCCCCCTTCCCACTAGTGAGACAAGAGGGAGGGTGCTGGTTTCTGAAAAATGTCACTTACCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55280207 217 + 59248254 CCAGCAGTCCGGCCTGGCCTGGGGTGCACCAGTGCA-AGGACAGAACTCTGCAGCAGACACAAGCTGACAGGATGTGCTGGCCAGGGGCCTCCTGCCTGTGGGGTTTCCACAGCAGCTGCCTCACAC-AAGAGGAAGAGCTTTCTGTCCTGTTCTTTCCCCCCTTCCCACTAGTGAGACAAGAGGGAGGGTGCTGGTTTCTGAAAAATGTCACTTACCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47370862 217 + 51301725 CCAGCAGTCCGGCCTGGCCTGGGGCACACCAGTGCA-AGGACAGAACTCTGCAGCAGACACAAGCTGACAGGATGTGCTGGCCAGGGGCCTCCTGCCTGTGGGGtttccacagcagctgcctcACAC-AAGAGGAAGAGCTCTCTGTCCTGTTCTTTCCCCCCTTCCCACTAGTGAGACAAGAGGGAGGGCGCTGGTTTCTGAAAAATGTCACTTACCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47076319 217 + 50890351 CCAGCAGTCCGGCCTGGCCTGGGGCACACCAGTGCA-AGGACAGAAGTCTGCAGCAGACACAAGCTGACAGGATGTGCTGGCCAGGGGCCTCCTGCCTGTGGGGTTTCCACAGCAGCTGCCTCACAC-AAGAGGAAGAGCTTTCTGTCCTGTTCTTTCCCCCCTTCCCACTAGTGAGATAAGAGGGAGGGCGCTGGTTTCTGAAAAATGTCACTTACCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45600414 171 + 49145316 ----------------------------------------CCAGAACTCTGCAGCACATGCAAGCGGGCAGGTTGTGCCAGCCA----CCTCCTGCCTATGGGGTTCCCACAGCAACTGCCTCACGC-AAGAGGAAGAGCTTTCTGCCCTGCTCTTTTCACACTTCTCAC---TGAGACCAGAGGGAGGGCCTTGGTTTCTGAAAAACGTCGCTTACCC i calJac3.chr22 C 0 I 7 s canFam3.chr1 19764877 203 - 122678785 CCTGCAGCCTGCACCGTCCTGGAG----CCACTGGGTAGGATAGAGC-CTGCAGCCGACACGGG--GACAGGATGTGTCAGCTGAGG----CATG-TTATGGAGTTTCTACATCAGCAGTCCCCCACAAAGAGGAAGCATGTTC--CCCTGTCCTTCCCACTTGTCCCACTA-TGAGAC-AGAGCGAGGGTTTTGGCCTCCAAAAGATGCCTCTTCCTT i canFam3.chr1 C 0 C 0 a score=19470.000000 s hg38.chr19_GL949747v2_alt 346435 17 + 729520 TAAATGTCGCTTAGAGG s panTro4.chr19 59294005 17 + 63644993 TAAATGTCGCTTAGAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4398936 8 - 60714840 -------CGCGTGAT-- i ponAbe2.chr19 C 0 I 3323 s nomLeu3.chr10 102921507 17 - 106955855 TAAATGTCGCTTAGAGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60180101 17 + 64156825 TAAATGTGGCTTAGGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55280424 17 + 59248254 TAAATGTGGCTTAGGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47371079 17 + 51301725 TAAATGTGGCTTAGGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47076536 17 + 50890351 TAAATGTGGCTTAGGAT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19765080 12 - 122678785 -----CATGCTTGGATG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45600585 7 + 49145316 I a score=788838.000000 s hg38.chr19_GL949747v2_alt 346452 273 + 729520 -----CAGATGACCGTAAACTAGTTACCAGATGTGTCAGCCTCTTTCTAAATCTATGGG----------------------------------------------------------------------------------------------ACAAGGCAGAATAAAGGT-C----------------GGGCAACCAATTGACTTGGACG-CCGTCCCAACTCCACAAGTTAACGGTCGCAGCTCTTGGGCAAGACGTTACAAAACTAGAAGCTGACATTTCCTTGTATTACAAATGGGAGCCATAGAAATCCTTCCCCAAGTTTTTAATATTGTGATCTATGCTAAAAT--CCCGACAAGGTATTTA--ACACGTT-AAAAATATCCTACAAA s panTro4.chr19 59294022 273 + 63644993 -----CAGATGACCCTAAACTAGTTACCCGATGTGTCAGCCTCTTTCTAAATCTATGGG----------------------------------------------------------------------------------------------ACAAGGCAGAATAAAGGT-C----------------GGGCAACCAACTGACTTGGACG-CCATCCCAACTCCACACGTTAACGGTCGCAGCTCTTGGGCAAGACGTTACAAAACTAGAAGCTGACATTTCCTTGTATTACAAATGGGAGCCATAGAAATCCTTCCCCAAGTTTTTAATATTGTGATCTATGCTAAAAT--CCCAACAAGGTATTTA--ACACGTT-AAAAATATCCTACAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56176519 273 + 60714840 -----CAGATGACCCTAAACTAGTTACCCGATGTGTCAGCCTCTTTCTAAATCTATGGG----------------------------------------------------------------------------------------------ACAAGGCAGAATAAAGGT-C----------------GGGCAACAAACTGACCTGGACG-CTATCCCAACTCCACAAGTTAACGGTTGCAGCTCTTGGGCAAGACATTACAAAACTAGAAGCTGATATTTCCTCGTATTACAAATGGGAGCCATAGAAATCCTTCCCCCAGTTTTTAATATTATGATCTCTGCTGAAAT--CCCAACAAGATATTTA--ACACGTT-AAAAATATCCTACAAC i ponAbe2.chr19 M 316 C 0 s nomLeu3.chr10 102921524 272 - 106955855 -----CAGATGACCCTAAACTAGTTACCCGATGTGTCAGCCTCTTTCTAAATCTATGAG----------------------------------------------------------------------------------------------ACAAGGGAGAATAAAGGC-C----------------GGGCAACCAACTGACTTGGACG-CCAGCCCAACTCCACACGTTAATGACCACTGCTCTTGGGCAAGATGTTACAAAACTAGAAGCTGACATTTCCTT-TATCACAAATGGGAGCCATAGAAATCCTTCCCCAAATTTTTAATATTGTGATCTTTGCTAAAAT--CCCAACAAGGTATTTA--ACACATT-AAAAATATCCTATAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60180118 274 + 64156825 -----CAGATGACCCTAAACTAGGTACCCGATGTGTCAGCCTCTTTCTAAATCTATGGG----------------------------------------------------------------------------------------------ACAAGGCAGAATAAAGGT-C----------------GGGCAACCAACTGACTTGGACG-CCATCCCAACTCCACAAGTCAACGGTCGCAGCTCTTGGGCAAGACGTGACACAACTAGAAGCTGACATTTCCTCGTATTAGAAATGGGAGCCATAGAAATCCTTCCCCAAATTTTTCATACTGTGATCTTTGCTAAAAT--CCCAACAAGGTATTTA--GCATGTTAAAAAATATTCTACGAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55280441 274 + 59248254 -----CAGATGACCCTAAACTAGGTACCCGATGTGTCAGCCTCTTTCTAAATCTATGGG----------------------------------------------------------------------------------------------ACAAGGCAGAATAAAGGT-C----------------GGGCAACCAACTGACTTGGACG-CCATCCCAACTCCACAAGTCAACGGTCGCAGCTCTTGGGCAAGACGTGACACAACTAGAAGCTGACATTTCCTCGTATTAGAAATGGGAGCCATAGAAATCCTTCCCCAAATTTTTCATACTGTGATCTTTGCTAAAAT--CCCAACAAGGTATTTA--ACATGTTAAAAAATATCCTACGAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47371096 273 + 51301725 -----CAGATGACCCTAAACTAGGTACCCGATGTGTCAGCCTCTTTCTAAATCTATGGG----------------------------------------------------------------------------------------------ACAAGGCAGAATAAAGGT-C----------------GAGCAACCAACTGACTTGGACG-CCATCCCAACTCCACAAGTCAACGGTCGAAGCTCTTGGGCAAGACATGACACAACTAGAAGCTGACATTTCCTCGTATTAGAAATGGGAGCCATAGAAATCCTTCCCCAAGTTTTTCATATTGTGATCTTTGCTAAAAT--CCCAACAAGGTATTTA--ACATGCT-AAAAATATCCTACAAc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47076553 276 + 50890351 -----CAGATGACCCTAAACTAGGTACCCGATGTGTCAGCCTCTTTCTAAATCTACGGG----------------------------------------------------------------------------------------------ACAAGGCAGAATAAAGGT-C----------------GGGCAACCAACTAACTTGGACG-CCATCCCAACTCCACAAGCCTACGGTCGCAGCTCTTGGGCAAGACGTGACAAAATTAGAAGCTGACGTTTCCTCGTATTAGAAATGGGAGCCGTAGAAATCCTTCCCCAAGTTTTTCATATTGTGATCTTTGCTAAAAT--CCCAACAAGGTATTTAACACACGTTAAAAAATATCCTACAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45600592 381 + 49145316 -----CAGATGACGCTAAACTAGTTACTCCATGTGTCA-CCTCTTTGTGAATCTATGGGAGCAGAGAACTTTCCAGACCTCCCGACCCCCTTTCCAGTCCTCCCCACTCCCTCCAGGACTCACCTAGGCCCAGGAGGGCAGTGGGGCGGGGGTACATGGCAGAATAAAGGT-CCTTGTCCTATGGGGTGGTGCAACA---TGCCTTGGACA-CCTTCCCAGCTCCACAGGTCAACAGCCGCAGCTCTTGGGCAAGACGTTACAAACTCAGAAGCTGACATTTCCTCGTATTTGAAATGGGAGCCACAGGAACCCTTCTCCAAGTTTTTAATATTGTGATCTTTGCTAAAATCGCGCAACAAGGTATTTA--ACATGTT-GAAAACACCCTGCAAT i calJac3.chr22 I 7 C 0 s canFam3.chr1 19765092 277 - 122678785 AGGCTGAACTCACCCCCAGATGAACCCCTGAGGGGAAAACCTAATTTTCAACCTCAGGg----------------------------------------------------------------------------------------------accaggcaggacatggctgt----------------gtacaagaaagtgacttgaatatctgtcccagctccaaaaaaagaccatc--tgttcttgggcaagacattatgccactttacaccaacatttcctcatatttgaaatgggaagcctag-aatcttcctcccagcattgacTATCATAATATTCGTTAAATT--CTCAGTCACATGTTGA--GAACTTT-AAAAATGTTATGCTAA i canFam3.chr1 C 0 I 1267 a score=556956.000000 s hg38.chr19_GL949747v2_alt 346725 211 + 729520 GCATATTA-TTTTTTTAAGGAGACagtattggtgaggatgtggagaaactggatccctcgcataccacagtaggaattaaaaattgggcaatcactatagagaacagtggggaggttcctcaaaaaattaaaaatagagctaccatatggtccagcaatcccacttctgggtctgtatt--------------------------------------------------------taaaagaaacaggccaggcgcagtggctcacag s panTro4.chr19 59294295 212 + 63644993 GCATATTATTTTTTTTAAGGAGACagtattggtgaggatgtggagaaattggatcccttgcatacttcagtaggaattaaaaattgggcaatcactatagagaacagtggggaggttcctcaaaaaattaaaaatagagctaccatatggtccagcaatcccacttctgggtctgtatt--------------------------------------------------------taaaagaaagaggccaggcgcggtggctcacag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56176792 211 + 60714840 GCATATCA-TTTTTTTAAGGAGACagtattggtgaggatgtggagaaattggatcccttgcatacttcagtaggaattaaaaattgggcaatcactatagagaacagtggggaggttcctcaaaaaattaaaaatagagctaccatatggtccagcgatcccacttctgggtctgtatt--------------------------------------------------------taaaagaaacaggccaggcgcagtggctcacag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102921796 211 - 106955855 GCATATTA-TTTTTTTAAGGAGACagtattggtgaggatgtggagaaattggatcccttgcatacttcagtgggaattaagaattgggcaatcactgtagagaacagtggggaggttcctcaaaaaattaaaaatagagctaccatatggtccagcgatcccacttctggggctgtatt--------------------------------------------------------taaaagaaACAggccaggcacggtggctcacag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60180392 267 + 64156825 GCATACTA-TTTTTTTCAGGAGACagtgttggtgaggatgtggagaaactggatcccttgcgtacttcagtgggaattaaaaattgggcaatcactatagagaacagtggggaggttcctcaaaaaattaaaaatagagctaccatatggcccaggaatcccacttctgggtctatatttaaaataaacaaaacaaaacaaaaaaaataaataaaaattaaaaaataaaataaaataaaataaacaggccaggcatgatggctcacgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55280715 267 + 59248254 GCATACTA-TTTTTTTCAGGAGACagtgttggtgaggatgtggagaaactggatccctcgcgtacttcagtgggaattaaaaattgggcaatcactatagagaacagtggggaggttcctcaaaaaattaaaaatagagctaccatatggcccaggaatcccacttctgggtctatatttaaaataaacaaaacaaaacaaaaaaaataaataaaaattaaaaaataaaataaaataaaataaaCAggccaggcatgatggctcacgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47371369 211 + 51301725 gcatttta-tgtttttaaggagacagtgttggtgagaatgtggagaaactggatccCTTGCGTACTTCAGTGGGAATTAAAAATTGGGCAATCACTATAGAGAACAGTggggaggttcctcaaaaaattaaaaatagagctaccatatggcCCAGGAGTCCCACTTCTGGGtctatgtt--------------------------------------------------------taaaataaacaggccaggcatgatggctcacag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47076829 211 + 50890351 GCATGCTA-TTTTTTTCAGGAGACagtgttggtgtggatgtggagaaactggatcccttgcgtacttcagtgggaattaaaaattgggcaatcactatagagaacagtggggaggttcctcaaaaaattaaaaatagagctaccatatggcccaggagtcccacttctgggtctatgtt--------------------------------------------------------taaaataaacaggccaggcatgatggctcacgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45600973 165 + 49145316 GGATGGTA-TTTGTTTAAGGAGACGGCAttggtgaggatgtggagaaactggctcccttgcatacttcggtgggaatgaaaagctgtgcaatcactgtagagaacagtgtggaggttccttaaaaagttagaaatagaactacca------------------------------------------------------------------------------------------------------gctgggcgcggtggctcacaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 19765369 1267 - 122678785 I a score=363016.000000 s hg38.chr19_GL949747v2_alt 346936 168 + 729520 ctgtaatcccagcacttcgggaggccaaggtgggtggatcacctgaggccataaattcgagaccagcctggccaacatagtgaaaccctgtctctactaaaaatac-aaaaaattagctgggtgtggtggtg---gg----------cacagctacttggaaggttgaggcag---gagaatcgc s panTro4.chr19 59294507 168 + 63644993 ctgtaatcccagcacttcgggaggccgaggtgggtggatcacctgaggccataaattcgagaccagcctggccaacatagtgaaaccctgtctctactaaaaatac-aaaaaattagctgggtgtggtggtg---gg----------cacagctacttgggaggctgaggcag---gagaatcgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56177003 168 + 60714840 ctgtaatcccagcacttcgggaggccgaggcgggtggatcacctgaggccacaaactcgaaaccagcctggccaacatagtgaaaccctgtctctactaaaaatac-aaaaaattagctgggtgtggtggtg---gg----------cacagctacttgggaggctgaggcag---gagaattgc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60180659 182 + 64156825 ctgtcatcccagcactttgggaggccgaggcaggtggatcacctgaggccaggagttcgagactagcctggccaacatagtgaaaccctgtctctactaaaaatacaaaaaaattagctgggtgtggtggtggcaggtgcctgtaatcccagctacttgggaggctgaggcag---gagaatcgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55280982 182 + 59248254 ctgtcatcccagcactttgggaggccgaggcaggtggatcacctgaggccaggagttcgagaccagcctggccaacatagtgaaaccctgtctctactaaaaatacaaaaaaattagctgggtgtggtggtggcaggtgcctgtaatcccagctacttgggaggctgaggcag---gagaatcgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47371580 179 + 51301725 ctgccatcccaacactttgggaggccgaggcaggtggatcacctgaggccaggagttcgagaccagcctggccgacatagtgaaaccctgtctctactaaaaatacaaaaaaattagctgggtgtggtggtg---ggtgcctgtaatcccagctacttgggaggctgaggcag---gagaatcgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47077040 179 + 50890351 ctgccatctcaacactttgggaggccgaggcaggtggatcacctgaggccaggagttcgagaccagcctggccaacatagtgaaaccctgtctctactaaaaatacaaaaaaattagctgggtgtggtggtg---ggtgcctgtaatcccagctacttgggaggctgaggcag---gagaatcgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45601138 176 + 49145316 ttgtaatcccagaactttaggaggccgaggcgggtggacca--tgaggtcaagagattcagatcatcctggccaaggcggtgaaacc--gtctctactaaaaatac--aaaaatcagctgggcatggtagca---tgcacctgtagtcctagctgctgaggaggctggggcaggCAgagaaccgc i calJac3.chr22 C 0 I 694 e canFam3.chr1 19765369 1267 - 122678785 I e nomLeu3.chr10 102922007 0 - 106955855 C a score=771701.000000 s hg38.chr19_GL949747v2_alt 347104 452 + 729520 ttgaacccagaaggcaggggttgcagtgagctgagattgcaccattgccctccagcctgggcaacaacagcaagactctgtcta----aaaaaaaaaaaaaaatcagtatgtcaaagagccgtctgaactcccctgatcactgcagcactattcgcaatagctaagacgtgaaaaccatctaaatgtccattgatagaagaattgatatagaaaatgtggtgcacacacaggggaatactattcagccttaaacaaggaagaaaattctgccatgggcgacaacacggacgaaacctgaggacatcacgccaagcgacgcagaggcagagaccaagtactgcatgatgtcacttacaggagatctgcaaagtcaccagagtc-acaacatcacagcagggaatggtggttacgggggctgggaggagggggaaatggggagttattAACAAACAGG-C s panTro4.chr19 59294675 447 + 63644993 ttgaacccagaaggcaggggttgcagtgagctgagattgcaccactgccctccagcctgggcaacaacagcaaga--ctgtcta----aaaaaaaaaaaag---cagtatgtcaaagagttgtctgaactcccctgatcactgcagcactattcacaatagctaagacgtgaaaatcatctaaatgtccattgatagaagaatggatgtagaaaatgtggtgcacacacaggggaatactattcagccttaaacaaggaagaaaattctgccatgggcgacaacacggacgaaacccgaggacatcacgccaagcgacgcagacgcagagaccaagtgctgcatgatgtcacttacaggagatctgcaaagtcaccagagtc-acaacatcacagcagggaatggtggttccgggggctgggaggagggggaaatggggagttattAACAAACAGG-C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56177171 443 + 60714840 ttgaacccggaaggcgggggttgcagtgagctgagattgcaccattgccctccagcctgggcaacaagagcaagactctgtcta----aaaaaaaaaat-----cagtatgtcaaagagttgtctgaactcccctgatcactgcagcactattcacaatagctaagacgtgaaaatcatctaaatgtccattgatagaagaatggatatagaaaatgtggtacacacacaggggaatactattcagccttaaacaaggaagaaaattcttccatgggcgacaacacggacgaaccctgaggacatcacgccaagcgat------gcagagaccaagtactgcatgatgtcacttacaggagatctgcaaagtcaccagagtcaacaacatcacagcagggaatggtggttacaggggctgggaggagggggaaatggggcgttattAACAAACAGGCC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60180841 450 + 64156825 ttgaacccagaaggcgggggttgcagtgagctgagattgcaccattgcactccagcctgggcaagaagagcaagactctgtctccaaaaaaaaaaaaaaaaaatcagtatgt-aaagagccatctgaactcccctgatcacggcagcactatgcactatagctaagacgtgaaaatcatctaaatgtcca-tgacagatgaatggatatggaaaatgtggtacacacacaggggaatactatgcagccttaaacaaggaagaaaattctgccatgggcgacaacacagacaaaccctgaggacatcacgccaagcgatgcagatgcggagaccaagtactgcatgatgtc----acaggaggtctgcaaagtcaccagagtc-acaacatcacagcagggaatggtggttatgggggctgggaggaagggaaaatggggagttattagcaaacagg-c i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55281164 445 + 59248254 ttgaacccagaaggcgggggttgcagtgagctgagattgcaccattgcactccagcctgggcaagaagagcaagactctgtctcc-----aaaaaaaaaaaaatcagtatgt-aaagagccatctgaactcccctgatcactgcagcactatgcactatagctaagacgtgaaaatcatctaaatgtcca-tgacagatgaatggatatggaaaatgtggtacacacacaggggaatactatgcagccttaaacaaggaagaaaattctgccatgggcgacaacacaggcaaaccctgaggacatcacgccaagcgatgcagatgcggagaccaagtactgcatgatgtc----acagggggtctgcaaagtcaccagagtc-acaacatcacagcagggaatggtggttatgggggctgggaggaagggaaaatggggagttattAGCAAACAGG-C i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47371759 447 + 51301725 ttgaacccagaaggcgggggttgcagtgagctgagattgcaccattgcactctagcctgggcaagaagagcaagactctgtctcc---aaaaaaaaaaaaaaatcagtatgt-aAAGAGCCATCTGAACTCCCCTGATCACTGCAGCACTATGCACTATAGCTAAGACGTGAAAATCATCTAAATGTCca-tgacagatgaatggatatggaaaatgtggtacacacacaggggaatactatgcagccttaaacaaggaagaaaattctgccatGGGCGACAACACAGACAAACCCTGAGGACATCACGCCAAGTGATGCAGATGCAGAGACCAAGTACTGCATGACGTC----ACAGGAGGTCTGCAAAGTCACCAGAGTC-ACAACATCACAGCAGGGAATGGTGGTTATGGGGGCTaggaggaagggaaaatggggagttattaGCAAACAGG-C i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47077219 446 + 50890351 ttgaacccagaaggcgggggttgcagtgagctgagactgcaccattgcactccagcctgggcaagaagagcaagactctgtctc----aaaaaaaaaaaaaaatcagtatgt-aaagagcaatctgaactcccctgatcactgcagcactatgcactatagctaagacgtgaaaatcatctaaatgtcca-tgacagatgaatggatatggaaaatgtggtacacacacaggggaatactatgcagtcttaaacaaggaagaaaattctgccatgggcgacaacacagacaaaccctgaggacatcatgccaagcaatgcagatgcagagaccaagcactgcatgatgtc----acaggaggtctgcaaagtcaccagagtc-acaacatcacagcagggaatggtggttatgggggctgggaggaggggaaaatggggagttattAGCAAACAGG-C i chlSab2.chr6 C 0 I 179 e canFam3.chr1 19765369 1267 - 122678785 I e calJac3.chr22 45601314 694 + 49145316 I e nomLeu3.chr10 102922007 0 - 106955855 C a score=595470.000000 s hg38.chr19_GL949747v2_alt 347556 509 + 729520 -ctagagatctgctgcaccacatacgaccc----atcgtcagcaataacgtcttgttcacttgaaatttgttaacggaatagacctcatgttatttggagggcccggaggaagacaggaagagaagggaatgtttgaaacttcttagagatggattaaatggttgtgaccaaaatgctgatagtgatgtgaacagcgaagtccaggctgacaaggtctcagttggaaataaggatcttacttggaactagagcgaaagccacctttgttacgccttagcaaacaacgtggctgcattctgtccatgccctagagataccacgccagggtgtctggcggaagaaatttc-------ttttctttttttttaaacggagtctcgctctgttgcccaggctggagtgaagcagtgcgatctcggctccctgcaacctctgcctcccagattcaagccattctcctgcctcagcctcccgattagctgggactacaggcgcccaccaccacgcccggctaatttt s panTro4.chr19 59295122 509 + 63644993 -ctagagacctgctgcaccacatacgaccc----atcgtcagcaataacgtcttgttcacttgaaattcgttaacggaatagacctcatgttatttggagggcccggaggaagacaggaagagaagggaatgtttgaaacttcttagaggcggattaaatggttgtgaccaaaatgctgatagtgatgtgaacagcgaagtccaggctgacaaggtctcagttggaaatgaggatcttactgggaactagagcgaaagccacctttgttacgccttagcaaacaacgtggctgtattgtgtccatgtcctagagatACCACGCCAGGGTGTCTGGCGGAAGAAAtttc-------ttttctttttttttaaacggagtctcgctctgtcgcccaggctggagtgcagtggctcagtctcggctcactgcaacctccatctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcacctgccaccacgcccggctaatttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56177614 510 + 60714840 -ctagagatctgctgcaccacatacgaccc----atcgtcaccaataacgtcttgttcacttgaaatgtgttaacggaatagacctcgtgttatttggagggcccggaggaagaccggaagagaagagaatgtttgaaacttcttagagacggattaaatggttgtgaccaaaacgccgatagtgatgtgaacagcgaagtccaggctgacaaggtctcagttggaaatgaggatcttactgggaactagagtgagggccacctttgttacgccttagcaaacaacgtggctgcattgtgtccatgccctagagataccacgccagggtatctggcagaagaaatttct------ttttttttttttttaaacggagtctcgctctgtcgcccaggctggagtgcagtggtgggatctcggctcactgcaagctccgcctcctgggttcacgctattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccaccacgcccggctaatttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60181291 505 + 64156825 cct----atctgctgtccaacatacgacctataaatcatcaataataatgtcttgttcacttgaaatttgttaa----------ctcatgttatttggagggcccagaggaagacaggaagagaagggaatgtttgaaacttcttggagactgattacatggttgtgaccaagatgctgatagtgatgtgagcagcgaagtccagactgacaaggtctcagctggaaatgaggatcttactgggaactagagcaatggccgcccttgttacgccttagcaaacaacactgctgcatagcgtccatgccctcgagatACCACGCCAGGGTATCTGG-GGAAGAAAtttcttttttcttttttcttttttttaacagagtctcgctctgtcgcccaggctggagtgcagtggtgcgatcgtggctcactgaaacctccgcctcccaggttgacgccattctcctgcctcagcctcccgagtagctgggactacaggcg-ccgccacctcgcccggctaatttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55281609 505 + 59248254 CCT----atctgctgtccaacctacaacctataaatcatcaataataatgtcttgttcacttgaaatttgttaa----------CTCATGTTAtttggagggcccagaggaagacaggaagagaagggaatgtttgaaacttcttggagactgattacatggttgtgaccaagatgctgatagtgatgtgagcagcgaagtccagactgacaaggtctcagctggaaatgaggatcttactgggaactagagcaatggccgcccttgttacgccttagcaaacaacactgctgcattgcgtccatgccctcgagatACCACGCCAGGGTATCTGG-GGAAGAAAtttcttttttcttttttcttttttttaacagagtctcgctctgtcgcccaggctggagtgcagtggtgcgatcgtggctcactgcaacctccgcctcccaggttgacgccattctcctgcctcagcctcccgagtagctgggactacaggcg-ccgccacctcgcccggctaatttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47372206 505 + 51301725 CCT----ATCTGCTGTCCAACATACGACCTATAAATCATCAATAATAATGTCTTGTTCACTTGAAATTTGTTAA----------CTCATGTTATTTGGAGGGcccagaggaagacaggaagagaagGGAATGTTTGAAACTTCTTGGAGACTGATTACATGGTTGTGACCAagatgctgatagtgatgtgagCAGCGAAGTCCAGACTGACAAGGTCTCAGCTGGAAATGAGGATCTTACTGGGAACTAGAGCAATAGCCACCCTTGTTACGCCTTAGCAAACAACATGGCTGCATTGCGTCCATGCCCTCGAGATACCACGCCAGGGTATCTgg-ggaagaaatttcttttttc-tttttcttttttttaacagagtctcgctctgtcgcccaggctggagtgcagtggtgcgatcgtggctgactgcaacctccgcctcccaggttcacaccattctcctgcctcagcctcctgagtagctgggactacaggcgcccgacaccacgccaggctaatttt i papAnu2.chr19 C 0 I 8656 e canFam3.chr1 19765369 1267 - 122678785 I e calJac3.chr22 45601314 694 + 49145316 I e nomLeu3.chr10 102922007 0 - 106955855 C e chlSab2.chr6 47077665 179 + 50890351 I a score=52482.000000 s hg38.chr19_GL949747v2_alt 348065 65 + 729520 ttgtatttttagcagagtcggggtttcaccgtgttagccaggatggtctcgatctcctgacctcg s panTro4.chr19 59295631 65 + 63644993 ttgtatttttagtagagacagggtttcactgtgttagccaggatggtctcgatctcctgacctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56178124 65 + 60714840 ttgtatttttagtagagacagggtttcactgtgttagccaagatggtctcaatctcctgacctca i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60181796 65 + 64156825 ttgtatttttagtagagacaggatttcattgtgttggccaggatggtcttgatctcttgtcctca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55282114 65 + 59248254 ttgtatttttagtagagacaggatttcattgtgttggccaggatggtcttgatctcttgtcctcg i macFas5.chr19 C 0 C 0 e canFam3.chr1 19765369 1267 - 122678785 I e calJac3.chr22 45601314 694 + 49145316 I e nomLeu3.chr10 102922007 0 - 106955855 C e chlSab2.chr6 47077665 179 + 50890351 I e papAnu2.chr19 47372711 8656 + 51301725 I a score=30568.000000 s hg38.chr19_GL949747v2_alt 348130 59 + 729520 tgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgaaccaccaagcct s ponAbe2.chr19 56178189 59 + 60714840 ttatccgcccgcctcggcctctcaaagtgctgggattacaggtgtgaaccaccaagccc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60181861 59 + 64156825 tgatccacccgcctcggcctctcaaagtgctgggattacaggcgtgagccaccacgcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55282179 59 + 59248254 tgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacgcct i macFas5.chr19 C 0 C 0 e canFam3.chr1 19765369 1267 - 122678785 I e calJac3.chr22 45601314 694 + 49145316 I e nomLeu3.chr10 102922007 0 - 106955855 C e chlSab2.chr6 47077665 179 + 50890351 I e papAnu2.chr19 47372711 8656 + 51301725 I e panTro4.chr19 59295696 0 + 63644993 C a score=28819.000000 s hg38.chr19_GL949747v2_alt 348189 337 + 729520 ggccaagtcagaagaaatttctaagcaacaaagtgttcaagtggcatggcttcttgtaccaacctaggctcagatgtgggagcaaagaaattacctaaaggtagagtttatatttaaaagagaagcaaagtgtaaaagttcgaaaaatttgcggactagccacatggtagaaaagaaaagtccgttttcaggggaggaattcaagtaggctgctgggcaacgacttgctggagaaatttgcataactaagagggagtcacgtgctgtaccaaaacatctcatctaccccataaatatatacacctactatgtatacacaaaaattaaaaATTTAAAA s ponAbe2.chr19 56178248 336 + 60714840 ggccaaggcagaagaaatttctaagcaacaaagtgttcaagtggcatgggttcttgtaccaacctaggctcagacgtgagagcaaagaaattacctaaaggtagagtttatatttaaaagagaagcaaagtgtaaaagttcgaaaaatttgcagactacccacatggtagaaaagaaaaatccattttcgggggaggaattcaggtagtctgctgggcaatgacttgccggagaaatttgcataactaagagggagtc-catgctgtatcaaaacatctcatctaccccataaatatatacacctactatgtatacaaaaaaattaaaaATTTAAAA i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19765369 1267 - 122678785 I e calJac3.chr22 45601314 694 + 49145316 I e nomLeu3.chr10 102922007 0 - 106955855 C e chlSab2.chr6 47077665 179 + 50890351 I e papAnu2.chr19 47372711 8656 + 51301725 I e macFas5.chr19 55282238 0 + 59248254 C e rheMac3.chr19 60181920 0 + 64156825 C e panTro4.chr19 59295696 0 + 63644993 C a score=1043.000000 s hg38.chr19_GL949747v2_alt 348526 4 + 729520 ACAT s ponAbe2.chr19 56178584 4 + 60714840 ACAT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3827174 2 - 59248254 --AT i macFas5.chr19 I 8331 C 0 s papAnu2.chr19 47381367 2 + 51301725 --AT i papAnu2.chr19 I 8656 C 0 e canFam3.chr1 19765369 1267 - 122678785 I e calJac3.chr22 45601314 694 + 49145316 I e nomLeu3.chr10 102922007 0 - 106955855 C e chlSab2.chr6 47077665 179 + 50890351 I e rheMac3.chr19 60181920 0 + 64156825 C e panTro4.chr19 59295696 0 + 63644993 C a score=910.000000 s hg38.chr19_GL949747v2_alt 348530 1 + 729520 A s ponAbe2.chr19 56178588 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3827176 1 - 59248254 A i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47381369 1 + 51301725 A i papAnu2.chr19 C 0 I 2 s calJac3.chr22 3406110 1 - 49145316 A i calJac3.chr22 n 694 C 0 e canFam3.chr1 19765369 1267 - 122678785 I e nomLeu3.chr10 102922007 0 - 106955855 C e chlSab2.chr6 47077665 179 + 50890351 I e rheMac3.chr19 60181920 0 + 64156825 C e panTro4.chr19 59295696 0 + 63644993 C a score=36460.000000 s hg38.chr19_GL949747v2_alt 348531 34 + 729520 TATAGTGACATGAGATGTAGTGTGAAATGTCATT s ponAbe2.chr19 56178589 34 + 60714840 TATAGTGACATGAGATGCAGTGTGAAATGTCATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3921150 34 + 106955855 TAAAATGACATAAGATGCAACGTGAAATGTCATT i nomLeu3.chr10 I 9595 C 0 s macFas5.chr19 3827179 34 - 59248254 TAAAATGACATAAGATGCAACGTGAAACGTCATT i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47381372 34 + 51301725 CAAAATGACGTAAGATATAACGTGAAATGTCATT i papAnu2.chr19 I 2 C 0 s calJac3.chr22 3406111 34 - 49145316 TAAAATGACCTAAGATGCAATGTGAAATGTCCTT i calJac3.chr22 C 0 T 1917 e canFam3.chr1 19765369 1267 - 122678785 I e chlSab2.chr6 47077665 179 + 50890351 I e rheMac3.chr19 60181920 0 + 64156825 C e panTro4.chr19 59295696 0 + 63644993 C a score=8867.000000 s hg38.chr19_GL949747v2_alt 348565 10 + 729520 AAAAGATGAG s ponAbe2.chr19 56178623 10 + 60714840 AAAAGATGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3921184 10 + 106955855 CAAAGAGGAG i nomLeu3.chr10 C 0 T 1871 s macFas5.chr19 3827213 10 - 59248254 CAAAGAAGAG i macFas5.chr19 C 0 T 2713 s papAnu2.chr19 47381406 10 + 51301725 CAAAGAAGAG i papAnu2.chr19 C 0 T 2520 s calJac3.chr22 3404228 10 - 49145316 AAAAAAAAAG i calJac3.chr22 T 1917 C 0 e canFam3.chr1 19765369 1267 - 122678785 I e chlSab2.chr6 47077665 179 + 50890351 I e rheMac3.chr19 60181920 0 + 64156825 C e panTro4.chr19 59295696 0 + 63644993 C a score=109160.000000 s hg38.chr19_GL949747v2_alt 348575 36 + 729520 ---TTTGCATCagaatagtccaaacgtttcaaaaacatt s panTro4.chr19 4222789 36 - 63644993 ---TTTGCATCAGAATAGTCCAAACATTTTAAAAACATT i panTro4.chr19 I 12032 I 8 s ponAbe2.chr19 56178633 36 + 60714840 ---TTTGCATCAGAATAGTCCAAACATTTCAAAAACATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3919323 36 + 106955855 ---TTTGCATCAGAGTAGTCCAAACATTTCAAAAACATT i nomLeu3.chr10 T 1871 I 8 s rheMac3.chr19 3841062 36 - 64156825 ---TTTGCATCAGAATAGTCCAAACATTTCAAAAACATC i rheMac3.chr19 I 5522 I 8 s macFas5.chr19 3824510 36 - 59248254 ---TTTGCATCAGAATAGTCCAAACATTTCAAAAACATT i macFas5.chr19 T 2713 I 8 s papAnu2.chr19 3793071 36 - 51301725 ---tttgcATCAGAATAGTCCAAACATTTCAAAAACATT i papAnu2.chr19 I 5657 I 177 s chlSab2.chr6 3686712 36 - 50890351 ---TTTGCATCAGAATAGTCCAAACATTTCAAAAACATT i chlSab2.chr6 T 3677 I 8 s calJac3.chr22 3404238 39 - 49145316 CTTTTAGCATCAAAATAGTGAAAATATTTCAAAAACATT i calJac3.chr22 C 0 I 7 e canFam3.chr1 19765369 1267 - 122678785 I a score=425813.000000 s hg38.chr19_GL949747v2_alt 348611 164 + 729520 ccagcatgatcactgccttgctgaccagtcttcctcctgagacgtGGTGACAGTAATGATCACAAACTTGGATCTCGTGGACAGACAGGGGAATTCAAGCTAAACCCTGGTCCTCAAAGAGTTCTGCATGTTACAGTCCCTGGTATATCCTTCCAATCTAATCC s panTro4.chr19 4222833 164 - 63644993 CCATCATAATCACTGCATTGCAGACTAGTCTTCCTCCCGAGACGTGGTGGCTGTAATGATCTCAAGCTGGGATGTCATGGACGGACAGGGGAACTCAAGCTAAACCCTGGTCCTCAAAGAGTTTTGCACAATGCAGTCCCAGGTATGTTCTTCCAATCTAATCC i panTro4.chr19 I 8 C 0 s ponAbe2.chr19 56178669 164 + 60714840 CCAGCATGATCACTGCGTTGCTGACCAGTCCTCCTTCCGAGACGTGGTAACGGTAATGATCTCAAGCTTGGATCTCGCGGACAGACAGGGGAACTCAAGCTAAACCCTGGTCCTCAAAGAGTTCTGCACGTTGCAGTCCCTGATATGTCCCTCCAATCTAATCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3919367 164 + 106955855 CCATTATAATCAGTGCATTGCAGACTAGTCCTCCTCCCGAGACGTGGTGGCTGTAATGATCTCAAGCTGGGATGTTGTGGACAGACAGGGGAACTCGAGCTAAATCCTGGTCCTCAAAGAGTTCTGCACGATGCAGTCCCAGGTACGTTCTTCCAATCTAATCC i nomLeu3.chr10 I 8 C 0 s rheMac3.chr19 3841106 164 - 64156825 CCATCATAATCACTACATTGCAGACTAGTCCTCCTCCCGAGACGCGGTGACTGTAATGATCTCAAGCTGGGATCTCATGGACAGACAGGGGAACTCAAGCTAAACCCTGGTCCTCCCAGAGCTCTGCATGATGCAGTCCCGGGTATGTTCTTTCAATCTAATCC i rheMac3.chr19 I 8 C 0 s macFas5.chr19 3824554 164 - 59248254 CCATCATAATCACTACATTGCAGACTAGTCCTCCTCCCGAGACGCGGTGACTGTAATGATCTCAAGCTGGGATCTCATGGACAGACAGGGGAACTCAAGCTAAACCCTGGTCCTCCCAGAGCTCTGCATGATGCAGTCCCGGGTATGTTCTTTCAATCTAATCC i macFas5.chr19 I 8 C 0 s papAnu2.chr19 47378896 164 + 51301725 CCAGCACGGTCACTGCGTTGCTGACCAGTCTTCCTCCTGACATGTGGTTGCCATAATGATCTCAAGCTTGGACCTCCTGGACAGACAGGGGAACTCAAGCTAAACCCTGGTCCTCACAGAGTTCAGCACATTGCAATCCCGTGTCTTTCCTTCCAATTGAATCC i papAnu2.chr19 T 2520 C 0 s chlSab2.chr6 3686756 164 - 50890351 CCATCATAATCACTACATTGCAGACTAGTCCTCCTCCTGAGACGCGGTGACTGTAATGATCTCAAGCTGGGATCTCATGGACAGACAGGGGAACTCAAGCTAAACCCTGGTCCTCCAAGAGTTCTACATGATGCAGTCCCGGGTATGTTCTTCCAATCTAATCC i chlSab2.chr6 I 8 C 0 s calJac3.chr22 3404284 162 - 49145316 TCCACATGACCACTGCACTGCTGACGAGTCTCCCTCCCGAGACGTGGTGGCTGTCATGGTCTCAAGCTCGGATCTCGTGGACAGACAGGGGAACTGACGCTAAACCCTGGT-CTCACGGAGTTCTGCACATTGCAGTTCT-GATGCGTCCTTCCAACCTAATCC i calJac3.chr22 I 7 C 0 e canFam3.chr1 19765369 1267 - 122678785 I a score=5378.000000 s hg38.chr19_GL949747v2_alt 348775 5 + 729520 AATTT s panTro4.chr19 4222997 5 - 63644993 AACTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56178833 5 + 60714840 AATTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3919531 5 + 106955855 AACTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841270 5 - 64156825 AATGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3824718 5 - 59248254 AATGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47379060 5 + 51301725 AATCT i papAnu2.chr19 C 0 I 1588 s chlSab2.chr6 3686920 5 - 50890351 AATGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3404446 4 - 49145316 ATCT- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19766636 5 - 122678785 aaTAT i canFam3.chr1 I 1267 C 0 a score=257683.000000 s hg38.chr19_GL949747v2_alt 348780 79 + 729520 TCTGTGA--------------GTCCATAAGACAGCAATCCATC-TAAAAAATAACAA------TAAACCAACTAAAACTGCTTAATATAATATGTTAAAG s panTro4.chr19 4223002 93 - 63644993 TCCGTGAATATGTTAGACTAAGTCCATAAGACAGCAATCCATC-CAAAAAATAACAA------TAAACCAACTAAAACTGCttaatataatatattaaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56178838 79 + 60714840 TCAATGA--------------GTCCATAAGACAGCAATCCATC-TAAAAAATGACAA------TAAACCAACTAAAACTGCTTAATATAATATGTTAAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3919536 93 + 106955855 TCTGTGAATATGTTAGACTAAGTCCATAAGACAGCAATCCATC-GAAAAAATAACAA------TAAACCAACTAAAACTGCTTAATATAATATATTAAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841275 93 - 64156825 TCTGGGAATATGTTAGACTGAGCCCATAAGACAGCAATCCATC-TAAAAAATAACAA------TAAACCAACTAAAACTGCttaatataatatattaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3824723 93 - 59248254 TCTGTGAATATGTTAGACTGAGCCCATAAGACAGCAATCCATC-TAAAAAATAACAA------CAAACCAACTAAAACTGCTTAATATAATATATTAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3793284 93 - 51301725 TCTGTGAATATGTTGGACTGAGCCCATAAGACAGcaatccatc-taaaaaataacaa------taaaccaACTAAAACTgcttaatataatatattaaaa i papAnu2.chr19 I 177 C 0 s chlSab2.chr6 3686925 93 - 50890351 TCTGTGAATATGTTAGACTGAGCCCATAAGACAGCAATCCATC-TAAAAAATAACAA------TAAACCAACTAAAACTGCTTAATATAATATATTAAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3404450 91 - 49145316 TCTATGAATATGTTAGACTAAGTCCATGGGACAGCAATCCATC-TGAAGAA-GACAA------TTAACCAACT-AAACTGCTTCCTATAATATATTGAAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19766641 86 - 122678785 --------------TGGATAAGAATATGGACCAACACTCCATCTTCAATTATAACAATTATTTTTAAAAACCTAAAGCTGCTTGATATAATATTTTAAAG i canFam3.chr1 C 0 C 0 a score=4920.000000 s hg38.chr19_GL949747v2_alt 348859 8 + 729520 A-TT-TTTTA s panTro4.chr19 4223095 9 - 63644993 actt-tttta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56178917 8 + 60714840 A-TT-TTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3919629 9 + 106955855 ACTT-TTTTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841368 9 - 64156825 attG-TTTTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3824816 10 - 59248254 ATTATTTTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3793377 10 - 51301725 ttttttttta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3687018 10 - 50890351 ATTTTTTTTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3404541 8 - 49145316 A-TT-TTTTA i calJac3.chr22 C 0 I 7 e canFam3.chr1 19766727 0 - 122678785 C a score=54426.000000 s hg38.chr19_GL949747v2_alt 348867 29 + 729520 ggccgggtgcaatggctcacgcctgtaat s panTro4.chr19 4223104 28 - 63644993 ggacaggcgtggtggctcatgcctgtaa- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56178925 29 + 60714840 ggccgggcaccgtggctcacgcctgtaat i ponAbe2.chr19 C 0 I 1240 s nomLeu3.chr10 3919638 28 + 106955855 ggccgggcgcggtggctcatgcctgtaa- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841377 28 - 64156825 ggccagccacagtggctcacacctgtaa- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3824826 28 - 59248254 ggccagccacagtggctcacgcctgtaa- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3793387 28 - 51301725 ggccaggcacagtggctcacgcctgtaa- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3687028 28 - 50890351 ggccaggtacagtggctcacgcctgtaa- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19766727 0 - 122678785 C e calJac3.chr22 3404549 7 - 49145316 I a score=0.000000 s hg38.chr19_GL949747v2_alt 348896 2 + 729520 ct e canFam3.chr1 19766727 0 - 122678785 C e ponAbe2.chr19 56178954 1240 + 60714840 I e calJac3.chr22 3404549 7 - 49145316 I e nomLeu3.chr10 3919666 0 + 106955855 C e chlSab2.chr6 3687056 0 - 50890351 C e papAnu2.chr19 3793415 0 - 51301725 C e macFas5.chr19 3824854 0 - 59248254 C e rheMac3.chr19 3841405 0 - 64156825 C e panTro4.chr19 4223132 0 - 63644993 C a score=234892.000000 s hg38.chr19_GL949747v2_alt 348898 102 + 729520 tctcagcattttgggaggccgaggtgggcagatcatgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatac-----aaaa s panTro4.chr19 4223132 104 - 63644993 tcccagcactttgggaggctgaggtgggcggatcacgaggcaaggagatcgagaccatcctggctaacacggtgaaaccccgtccctactaaaaatac---aaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4402267 107 - 60714840 tcccagcactttgggaggctgaggtgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccctgtccctactaaaaatacaaaaaaaaa i ponAbe2.chr19 I 3323 C 0 s nomLeu3.chr10 3919666 106 + 106955855 tcccagcactttgggaggccgaggcgggcggatcacgaagtcaggagatcgagaccatcctggctaacacggtgaaaccccgtccctactaaaaatac-aaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841405 103 - 64156825 tcccagcactttgggaggccgaggcagccggatcacaaggtcaggagatcaagaccatcctggctaacatggtaaaaccccgtccctactaaaaatac----aaaaa i rheMac3.chr19 C 0 I 9 s macFas5.chr19 3824854 102 - 59248254 tcccagcactttgggaggccgaggcagccggatcacaaggtcaggagatcaagaccatcctggctaacatggtaaaaccccgtccctactaaaaatgc-----aaaa i macFas5.chr19 C 0 I 9 s papAnu2.chr19 3793415 106 - 51301725 ttccagcactttgggaggccgaggcagccggatcacaaggtcaggagatcaagaccatcctggctaacacagtaaaaccccgtccctactaaaaatac-aaaaaaaa i papAnu2.chr19 C 0 I 9 s chlSab2.chr6 3687056 102 - 50890351 tcccagcactttgggaggccgaggcagccggatcacaaggtcaggagatcaagaccatcctggctaacacggtaaaaccccatccctactaaaaatac-----aaaa i chlSab2.chr6 C 0 I 7069 e canFam3.chr1 19766727 0 - 122678785 C e calJac3.chr22 3404549 7 - 49145316 I a score=273089.000000 s hg38.chr19_GL949747v2_alt 349000 157 + 729520 aattagccgggcgtggtggtgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggtgggaacccgggaggcggaggctgcagtgagccgagatcgtgccattgcactccagcctgggtgacagagccagactccatctaaaaaaa s panTro4.chr19 4223236 157 - 63644993 aattagccgggcgtggtggtgggtgcctgtagtcccagctactcgggaggctgaggcgagagaatggtgggaacccgggaggcggaggttgcagtgagccgagatcgtgccactgcactccagcctgagagacagagccagactccgtctcaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4402374 157 - 60714840 aattagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcgagagaatggcgggaacctgggaggcggaggtcgcagtgagccgagatcgtgccactgcactccagcctgagagacagagccagactctgtctcaaaaaa i ponAbe2.chr19 C 0 n 0 s nomLeu3.chr10 3919772 157 + 106955855 aattagccgggcgtagtggcgggcgcctgtagtcccagctactcgggaggctgaggcgagagaatggcgggaacccgggaggtggaggttgcagtgagccgagatcgcgccactgcactccagcctgagagacagagccagactctgcctcaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841517 157 - 64156825 aattagccactcgtggtagagggcgcctattgtcccagctactcaggaggctgaggcgggagaatggtgtgaacccgggaggcggagcttgcagtgagccgagatggtgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaa i rheMac3.chr19 I 9 I 25 s macFas5.chr19 3824965 157 - 59248254 aattagccaggcgtggtagcgggcgcctattgtcccagctactcaggaggctgaggcgggagaatggtgtgaacccgggaggcggagcttgcagtgagccgagatggtgccactgcactctagcctgggcaacagagcgagactccgtctcaaaaaa i macFas5.chr19 I 9 C 0 s papAnu2.chr19 3793530 157 - 51301725 aattagccaggcgtggtagcgggcgcctattgtcccagctactcaggaggctgaggcgggagaatggtgtgaacccgggaggtggagcttgcagtgagccgagatggtgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaa i papAnu2.chr19 I 9 I 32 e canFam3.chr1 19766727 0 - 122678785 C e calJac3.chr22 3404549 7 - 49145316 I e chlSab2.chr6 3687158 7069 - 50890351 I a score=665.000000 s hg38.chr19_GL949747v2_alt 349157 4 + 729520 TATA s panTro4.chr19 4223393 4 - 63644993 tata i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3919929 4 + 106955855 taaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3825122 4 - 59248254 aaca i macFas5.chr19 C 0 I 21 e canFam3.chr1 19766727 0 - 122678785 C e ponAbe2.chr19 4402531 0 - 60714840 I e calJac3.chr22 3404549 7 - 49145316 I e chlSab2.chr6 3687158 7069 - 50890351 I e papAnu2.chr19 3793687 32 - 51301725 I e rheMac3.chr19 3841674 25 - 64156825 I a score=546.000000 s hg38.chr19_GL949747v2_alt 349161 2 + 729520 TA s panTro4.chr19 4223397 2 - 63644993 ta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3919933 2 + 106955855 ta i nomLeu3.chr10 C 0 I 12 e canFam3.chr1 19766727 0 - 122678785 C e ponAbe2.chr19 4402531 0 - 60714840 I e calJac3.chr22 3404549 7 - 49145316 I e chlSab2.chr6 3687158 7069 - 50890351 I e papAnu2.chr19 3793687 32 - 51301725 I e macFas5.chr19 3825126 21 - 59248254 I e rheMac3.chr19 3841674 25 - 64156825 I a score=91.000000 s hg38.chr19_GL949747v2_alt 349163 1 + 729520 t s panTro4.chr19 4223399 1 - 63644993 t i panTro4.chr19 C 0 I 7 e canFam3.chr1 19766727 0 - 122678785 C e ponAbe2.chr19 4402531 0 - 60714840 I e calJac3.chr22 3404549 7 - 49145316 I e nomLeu3.chr10 3919935 12 + 106955855 I e chlSab2.chr6 3687158 7069 - 50890351 I e papAnu2.chr19 3793687 32 - 51301725 I e macFas5.chr19 3825126 21 - 59248254 I e rheMac3.chr19 3841674 25 - 64156825 I a score=0.000000 s hg38.chr19_GL949747v2_alt 349164 313 + 729520 tttttttaattttttttttttttttgagacagagtctcgctctgtcgcccaggccggactgcggactgcagtggcgcaatctcggctcactgcaagctccgcttcccgggttcacgccattctcctgcctcagcctccccagtagctgggactacaggcgcccgccaccacgcccggctaattttttgtatttttagtagagacggggtttcaccttgttagccaggatggtctcgatctcctgacctcatgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcctggcc e canFam3.chr1 19766727 0 - 122678785 C e ponAbe2.chr19 4402531 0 - 60714840 I e calJac3.chr22 3404549 7 - 49145316 I e nomLeu3.chr10 3919935 12 + 106955855 I e chlSab2.chr6 3687158 7069 - 50890351 I e papAnu2.chr19 3793687 32 - 51301725 I e macFas5.chr19 3825126 21 - 59248254 I e rheMac3.chr19 3841674 25 - 64156825 I e panTro4.chr19 4223400 7 - 63644993 I a score=91.000000 s hg38.chr19_GL949747v2_alt 349477 1 + 729520 T s panTro4.chr19 4223407 1 - 63644993 t i panTro4.chr19 I 7 C 0 e canFam3.chr1 19766727 0 - 122678785 C e ponAbe2.chr19 4402531 0 - 60714840 I e calJac3.chr22 3404549 7 - 49145316 I e nomLeu3.chr10 3919935 12 + 106955855 I e chlSab2.chr6 3687158 7069 - 50890351 I e papAnu2.chr19 3793687 32 - 51301725 I e macFas5.chr19 3825126 21 - 59248254 I e rheMac3.chr19 3841674 25 - 64156825 I a score=1638.000000 s hg38.chr19_GL949747v2_alt 349478 3 + 729520 AAT s panTro4.chr19 4223408 3 - 63644993 aat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180194 3 + 60714840 aat i ponAbe2.chr19 I 1240 C 0 s canFam3.chr1 19766727 3 - 122678785 AAT i canFam3.chr1 C 0 C 0 e calJac3.chr22 3404549 7 - 49145316 I e nomLeu3.chr10 3919935 12 + 106955855 I e chlSab2.chr6 3687158 7069 - 50890351 I e papAnu2.chr19 3793687 32 - 51301725 I e macFas5.chr19 3825126 21 - 59248254 I e rheMac3.chr19 3841674 25 - 64156825 I a score=50103.000000 s hg38.chr19_GL949747v2_alt 349481 25 + 729520 TTTTTGTAATGCCTAAGAGATATAA s panTro4.chr19 4223411 25 - 63644993 tttttttaatGCCTAAGAGATATAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180197 25 + 60714840 tttttttaatGCCTAAGAGATATAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3919947 25 + 106955855 TTGTTTTAATGCCTCAGAGATATAA i nomLeu3.chr10 I 12 C 0 s rheMac3.chr19 3841699 25 - 64156825 TTTTTTTAATGCCTCAAAGATATAA i rheMac3.chr19 I 25 C 0 s macFas5.chr19 3825147 25 - 59248254 TTTTTTTAATGCCTCAAAGATATAA i macFas5.chr19 I 21 C 0 s papAnu2.chr19 3793719 25 - 51301725 tttttttaatgCCTCAAAGATATAA i papAnu2.chr19 I 32 C 0 s canFam3.chr1 19766730 25 - 122678785 ATTCTCAAGTGCCTTAAAGATATGA i canFam3.chr1 C 0 C 0 e calJac3.chr22 3404549 7 - 49145316 I e chlSab2.chr6 3687158 7069 - 50890351 I a score=62417.000000 s hg38.chr19_GL949747v2_alt 349506 24 + 729520 AAACTAAGTGAAGGCTATGCAGTC s panTro4.chr19 4223436 24 - 63644993 AAGCTAAGTGAAGGCTATGCAGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180222 24 + 60714840 AAACTAAGTGAAGGCTGTGCAGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3919972 24 + 106955855 AAACTAAGTGAAGGCTGTGCAGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841724 24 - 64156825 AAACTAAGTGAAGGCTGTGCAGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3825172 24 - 59248254 AAACTAAGTGAAGGCTGTGCAGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3793744 24 - 51301725 AAACTAAGTGAAGGCTGTGCagtc i papAnu2.chr19 C 0 C 0 s calJac3.chr22 3404556 23 - 49145316 AAACTAAGTGAAGGCTTTG-AATC i calJac3.chr22 I 7 C 0 s canFam3.chr1 19766755 24 - 122678785 AAGCTATAGGGAGGCTAAATAGTC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 3687158 7069 - 50890351 I a score=492807.000000 s hg38.chr19_GL949747v2_alt 349530 164 + 729520 AAAAGTTAAAGAAAGATGGAG-TCCCCAGCCTCAAGCTGAAT-ACTGAACCTGGAGCTCACCTTG-------ATGATGATGAATTAACTGAGCTTTATTTTCATGGTTTTGTAAATCATGAGG-A--CAAGGATAAAGTGCAGGGGT---------------------ACAGATTC--------------------CAAAAGCTTCCACCTCATCAT s panTro4.chr19 4223460 164 - 63644993 AAAAGTTAAAGAAAGACGGAG-TCCCCAGCCTCAAGCTGAAT-ACTGAACCTGGTGCTCACCTTG-------ATGATGATGAATTAACTGAGCTTTATTTTCATGGTTTTGTAAATCATGAGG-A--CAAGGATAAAGTGCAGGGGT---------------------ACAGATTC--------------------CAAAAGCTTCCACCTCATCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180246 164 + 60714840 AAAAGTGAAAGAAAGACGGAC-TCCCCAGACTCAAGCTGAAT-ACTGAACCTGATGCTCACCTTG-------ATGATGATGAATTAACTGAGCTTTATTTTCATGGTTTTGTAAATCACGGGG-A--GAAGGATAAAGTGCAGGGGT---------------------ACAGATTC--------------------CAAAAGCTTCCACCTCATCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3919996 164 + 106955855 AAAAGTTAAAGAAAGACGGAA-TCCCCAGACTCAAGCTGAAT-ACTGAACCTGGTTCTCACCTTG-------ATGATGATGAATTAACTGAGCTTTATTTTCATGGTTTTGTAAATCACGGGG-A--GAAGGATAAAGTGCAGGGGT---------------------ACAGATTT--------------------CAAAAGCTTCCACCTCATCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841748 164 - 64156825 AAAAATTAAAGAAAGACGGAA-TCCCCAGACTCCAGCTGAAT-ACTGAACCTGGTGCTCACCTTG-------ATGATAAGGAATTAACTGAGCTTTATTTTCATGGTTTTGTAAATCATGGGG-A--GAAGCACAGACTGCAGGGGT---------------------GCACATTC--------------------CAAAAGCTTCCAGCTCATCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3825196 164 - 59248254 AAAAATTAAAGAAAGACGGAA-TCCCCAGACTCCAGCTGAAT-ACTGAACCTGGTGCTCACCTTG-------ATGATAAGGAATTAACTGAGCTTTATTTTCATGGTTTTGTAAATCATGGGG-A--GAAGCACAGACTGCAGGGGT---------------------GCACATTC--------------------CAAAAGCTTCCAGCTCATCCT i macFas5.chr19 C 0 I 313 s papAnu2.chr19 3793768 164 - 51301725 aaaaattaaagaaagacgGAA-TCCCCAGACTCCAGCTGAAT-ACTGAACCTGGTGCTCACCTTG-------ATGATAAGGAATTAACTGAGctttattttcatggttttgtAAATCATGGGG-A--GAAGCACAAACTGCAGGGGT---------------------GCACATTC--------------------CAAAAGCTTCCAGCTCATCCT i papAnu2.chr19 C 0 I 313 s chlSab2.chr6 3694227 164 - 50890351 aaaaattaaagaaaGACGGAA-TCCCCAGACTCCAGCTGAAT-ACTGAACCTGGTGCTCACCTTG-------ATGATGAGGAATTAACTGAGCTTTATTTTCATGGTTTTGTAAATCATGGGG-A--GAAGCACAAAGTGCAGGGGT---------------------GCACATTC--------------------CAAAAGCTTCCAGCTCATCCT i chlSab2.chr6 I 7069 C 0 s calJac3.chr22 3404579 171 - 49145316 AAAAATTAAAGAAAGATGGAA-CCCCCAGACTCAAGCCGAAT-ACTGAAACTGCTTCTCACCTGACGATTATATGACTATGAA-TAACTGAACTTTATTTTCATGGTTATGAAGACCGTGGGGCA--GAAGGATAAAGGGCAGGGGT---------------------ACAGATTC--------------------CAGAAGCTTCCACCTCATTAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19766779 205 - 122678785 AGAAATTAAAGGAAGTTGGGATTCCCCAGAGTCAAGCTGGATGGCTGAACCTGGCTCTCACCTTG-------ACGGTGATGAGGTA----AGTCTTCTCTCCCTGGCCTCACAGATCCTGGAG-GCTAAAGGCTAAAGCCCAGAGGTCACCCTGGTCGAGGAGTCTGGGGAGACTCTCCCTTTGCTAGGCCAGAATCTGAAGCTTCCATTTTATTGT i canFam3.chr1 C 0 C 0 a score=3501.000000 s hg38.chr19_GL949747v2_alt 349694 2 + 729520 AA s panTro4.chr19 4223624 2 - 63644993 AA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180410 2 + 60714840 AA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920160 1 + 106955855 A- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841912 2 - 64156825 AA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3825673 2 - 59248254 aa i macFas5.chr19 I 313 C 0 s papAnu2.chr19 3794245 2 - 51301725 aa i papAnu2.chr19 I 313 C 0 s chlSab2.chr6 3694391 2 - 50890351 AA i chlSab2.chr6 C 0 I 305 s calJac3.chr22 3404750 2 - 49145316 AA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19766984 2 - 122678785 AA i canFam3.chr1 C 0 C 0 a score=30634.000000 s hg38.chr19_GL949747v2_alt 349696 10 + 729520 GAATGATTTC s panTro4.chr19 4223626 10 - 63644993 GAATGATTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180412 10 + 60714840 GAATGATTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920161 9 + 106955855 -GATGATTTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841914 10 - 64156825 GAATGATTTC i rheMac3.chr19 C 0 I 312 s macFas5.chr19 3825675 10 - 59248254 GAATGATTTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3794247 10 - 51301725 gaatgatttc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3694698 10 - 50890351 GAATGATTTC i chlSab2.chr6 I 305 C 0 s calJac3.chr22 3404752 10 - 49145316 GAATGAATTA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19766986 10 - 122678785 GAGTGAACTG i canFam3.chr1 C 0 C 0 a score=13104.000000 s hg38.chr19_GL949747v2_alt 349706 4 + 729520 AAAT s panTro4.chr19 4223636 4 - 63644993 AAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180422 4 + 60714840 AAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920170 4 + 106955855 AAAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3825685 4 - 59248254 AAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3794257 4 - 51301725 aaaT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3694708 4 - 50890351 AAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3404762 4 - 49145316 AAAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19766996 4 - 122678785 AAAT i canFam3.chr1 C 0 C 0 e rheMac3.chr19 3841924 312 - 64156825 I a score=264089.000000 s hg38.chr19_GL949747v2_alt 349710 108 + 729520 CACTCACCAACTTCTCATGGTTGCAAGGAATACTACATTTGTTTTGAAACTTAGCATTGAACATGAGGCCAAAACACAGTGGCTCCTG-AGAATGACTTTC-------------------CTGCTTCT s panTro4.chr19 4223640 108 - 63644993 CACTCACCAACTTCTCGTGGTTGCAAGGAATACTACATTTGTTCTGAAACTTAGCATTGAACACGAGGCCAAAACACAGTGGCTCCTG-AGAATGACCTTC-------------------CTGCTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180426 102 + 60714840 CACTCACCAACTTCTCGTGGTTGCAAGGAATACTACATTTGTTTTGAAACTTAGCATTGAACACAAGGCCAAAACACAGTGGCTCC-------TGATTTTC-------------------CTGCTTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920174 108 + 106955855 CACTCACCAACTTCTCGTAGTTGCAAGGAATACGACATCTGTTTTGAAACTTCGCCTTGAACCCGAGGCCAAAACACAGTGGTTCCTG-AGAATGACTTTC-------------------CTGCTTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3842236 95 - 64156825 CACTCTCCAGCTTCTCGTGGTTGCAAGGAATACTACATTTGTTTGGAAACTTAGCATC-------------AAACCAAGTGGCTCCTG-AGAATGACTTTC-------------------CTGCTTCT i rheMac3.chr19 I 312 C 0 s macFas5.chr19 3825689 95 - 59248254 CACTCTCCAGCTTCTCGTGGTTGCAAAGAATACTACATTTGTTTGGAAACTTAGCATC-------------AAACCAAGTGGCTCCTG-AGAATGACTTTT-------------------CTGCTTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3794261 95 - 51301725 CACTCTCCAACTTCTCGTGATTGCAAGGAATACTACATTTGTTTTGAAACTTAGCATC-------------AAACCAAGTGGCTCCTG-AGAATGACTTTC-------------------CTGCTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3694712 95 - 50890351 CACTCTCCAACTTCTCGTGGTTGCAAGGAATACTACATTTGTTTTGAAACTTAGCATC-------------GAACCAAGTGGCTCCAG-AGAATGACTTTC-------------------CTGCTTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3404766 108 - 49145316 CACTCTCCAACTTCTCAAGGTTGCAAGGGATACTACATTTGTTCTGAAACTTAACATTCAACAGGAGGCCAAAACAAAGCTGCTCCTG-AGAATGACTTTC-------------------CTGCTCCT i calJac3.chr22 C 0 I 268 s canFam3.chr1 19767000 110 - 122678785 TACTCACCCATCTCTAAGGGCTGTCAAGAATACG-----TGTTTTGAAAC------------AGGAGGCCAAAAC-TGCTTGCTCTTGAAAAATGACCTACACCAGCCAGCCCCGCGAATCTGCACCT i canFam3.chr1 C 0 C 0 a score=39897.000000 s hg38.chr19_GL949747v2_alt 349818 17 + 729520 GACTCTTCTTTTACTGG s panTro4.chr19 4223748 17 - 63644993 GACTCTTCTTTCACGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180528 17 + 60714840 GACTCTTCTTTCACGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920282 17 + 106955855 GACTCTTCTTTCACGTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3842331 17 - 64156825 GACTCTTCTTTTACTTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3825784 17 - 59248254 GACTCTTCTTTTACTTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3794356 17 - 51301725 GACTCTTCTTTTACTTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3694807 17 - 50890351 GACTCTTCTTTTACTTG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19767110 17 - 122678785 TCCTCATCTTTTTTCTC i canFam3.chr1 C 0 C 0 e calJac3.chr22 3404874 268 - 49145316 I a score=83361.000000 s hg38.chr19_GL949747v2_alt 349835 42 + 729520 -CATAATGGTTTCTATGCATTAGATTATCCTCCCTGCCTCTTT s panTro4.chr19 4223765 42 - 63644993 -CAGAATGGTTTCTATGTATTAGATTCTCCCCTCTGCCTCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180545 42 + 60714840 -CAGAATGGTTTCTATGTATTAGATTCTCCCCCCTGCCTCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920299 42 + 106955855 -CAGAATGGTTTCTATGTATTAGATTCTCCTCCCTGCCTCTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3842348 41 - 64156825 -CAGGATGGTTTCTCTGTAGGAGAGTCTCCT-TCAGCGATTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3825801 41 - 59248254 -CAGGATGGTTTCTCTGTAGGAGAGTCTCCT-TCAGCGATTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3794373 41 - 51301725 -CAGAATGGTTTCTCTGTAGGAGAGTCTTCT-TCAGTGATTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3694824 41 - 50890351 -CAGAATGGTTTCTCTGTAGGAGAATCTCCT-TCAGCGATTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3405142 42 - 49145316 -CAGAATGGCTTCTGTGTATTGGATTCTCCTCCCTGCCTCTTT i calJac3.chr22 I 268 C 0 s canFam3.chr1 19767127 43 - 122678785 TGTGTGTGTTCCCCCTGGGATCTATTTGTCtctctgtctctgt i canFam3.chr1 C 0 I 62 a score=132458.000000 s hg38.chr19_GL949747v2_alt 349877 61 + 729520 TCACTTTAGGTCTTCATTAGTGAtttttattcagctttatcaaaggatcctttgcacacaa s panTro4.chr19 4223807 61 - 63644993 TCACTTTAGGTCTTCATTAGCGAtttttaatcagctttatcaaggaatccttggcagacaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180587 61 + 60714840 TCACTTTAGGTCTTCATTAGCGAtttttattcagctttatcaaagaatcctttgcacacaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920341 61 + 106955855 TCACTTTAGGTCTTCATTAGCGAtttttaatcagctttatcaaggaatccttggcagacaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3842389 50 - 64156825 TCACT-----------TCAGCGAtttttaatcagctttatcacggaatccttggcagacaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3825842 50 - 59248254 TCACT-----------TCAGCGAtttttaatcagctttatcaaggaatccttggcagacaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3794414 50 - 51301725 TCACT-----------TCAGCGATTTTTAATCAGCTTTATCAAGGAATCCTTGGCAGACAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3694865 50 - 50890351 TCACT-----------TCAGCGAtttttaatcagctttatcaaggaatccttggcagacaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3405184 61 - 49145316 TCCTTTTAGATCTTCATTAGGGAtttttaatcagcgttatcaaggattaatttgcaaaccg i calJac3.chr22 C 0 C 0 e canFam3.chr1 19767170 62 - 122678785 I a score=237619.000000 s hg38.chr19_GL949747v2_alt 349938 84 + 729520 actgcatccacttaatctgtgcaattcagtgaattctgac-agctgtgaaaccaccaacatatccaagattttcttcactgctca s panTro4.chr19 4223868 84 - 63644993 actgccttctttgaatctgtgcaattcagtgaattctgac-agttgtgaaaccaccaacatatccaagatTTTCCTCACTACTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180648 84 + 60714840 actgcatccacttaatctgtgcaattcagtgaattctgag-agttgtgaaaccaccaacatatccaagatttttttcactactca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920402 84 + 106955855 actgccttcattgaatctgtgcgattcagtgaattctgac-agttgtgaaaccaccaacatatccaagatTTTCCTCACTACTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3842439 84 - 64156825 actaccttcattgaagctgtgcaactcagtgaattctgac-agctgtgaaaccaccaacatagccaagaGTTTCCTCACTTCTCA i rheMac3.chr19 C 0 I 5929 s macFas5.chr19 3825892 84 - 59248254 actgccttcattgaagctgtgcaactcagtgaattctgac-agctgtgaaaccaccaacatagccaagAGTTTCCTCACTACTCA i macFas5.chr19 C 0 I 8745 s papAnu2.chr19 3794464 84 - 51301725 ACTGCCTTCATTGAAGCTGTGCAATTCAGTGAATTCTGAC-AGCTGTGAAACCACCAACATAGCCAAGAGTTTCCTCACTACTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3694915 84 - 50890351 actgtcttcattgaagctgtgcaattcagtgaattctgac-agctgtgaaaccaccaacatagccaagagtttcctcactactca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3405245 84 - 49145316 atggcatccgtttaatctgtgcaattcggtgaattctgac-agctgtgaaaccaccaacatatccaagatcttcatcactactca i calJac3.chr22 C 0 C 0 s canFam3.chr1 19767232 77 - 122678785 ATTGCCTCCTTT----CTCTGCAACTCTG-GCTTGCTCACTAGCTGT--CCTCAGCATCATGGCC-TGGTCCCCTGCTTTGCTTT i canFam3.chr1 I 62 C 0 a score=23535.000000 s hg38.chr19_GL949747v2_alt 350022 13 + 729520 gaagattcctcat s panTro4.chr19 4223952 13 - 63644993 GAAGATTCCTCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180732 13 + 60714840 gaagattcctcat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920486 13 + 106955855 GAAGATTCCTCCT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 3794548 13 - 51301725 GAAGATTCCTCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3694999 13 - 50890351 gaagattcctcgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3405329 13 - 49145316 aaagattcctcgt i calJac3.chr22 C 0 C 0 s canFam3.chr1 19767309 11 - 122678785 --GCAATCCTTAT i canFam3.chr1 C 0 C 0 e macFas5.chr19 3825976 8745 - 59248254 I e rheMac3.chr19 3842523 5929 - 64156825 I a score=3065.000000 s hg38.chr19_GL949747v2_alt 350035 3 + 729520 gct s panTro4.chr19 4223965 3 - 63644993 GCT i panTro4.chr19 C 0 I 13529 s ponAbe2.chr19 56180745 3 + 60714840 gct i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 3794561 3 - 51301725 GCT i papAnu2.chr19 C 0 I 2044 s chlSab2.chr6 3695012 3 - 50890351 gcT i chlSab2.chr6 C 0 I 1091 s canFam3.chr1 19767320 1 - 122678785 --T i canFam3.chr1 C 0 C 0 e calJac3.chr22 3405342 0 - 49145316 C e nomLeu3.chr10 3920499 0 + 106955855 C e macFas5.chr19 3825976 8745 - 59248254 I e rheMac3.chr19 3842523 5929 - 64156825 I a score=7744.000000 s hg38.chr19_GL949747v2_alt 350038 98 + 729520 cctt-------tgCCTCC--------ATGTGGCCACTGGTTCCTTTTTGATAT-GTATTTGTTGACTGatttatttatttatttatttatttatatatttattttgagactgag s ponAbe2.chr19 56180748 86 + 60714840 cctt-------tgCCTCC--------ATGTGGCCACTGGTTCCTTTTTGATAT-GTATTTGTTGACt------------tatttatttatttatatatttattttgagactgag i ponAbe2.chr19 C 0 C 0 s canFam3.chr1 19767321 114 - 122678785 CCCTGGAGTAATGCCTCCCACGAACAAAATCCTCCCTGCTCCGTTTTTTGCATAGTCTTttttttttaaagattttatttatttattcatagacacagaaagagagaggcagag i canFam3.chr1 C 0 I 347 e calJac3.chr22 3405342 0 - 49145316 C e nomLeu3.chr10 3920499 0 + 106955855 C e chlSab2.chr6 3695015 1091 - 50890351 I e papAnu2.chr19 3794564 2044 - 51301725 I e macFas5.chr19 3825976 8745 - 59248254 I e rheMac3.chr19 3842523 5929 - 64156825 I e panTro4.chr19 4223968 13529 - 63644993 I a score=10736.000000 s hg38.chr19_GL949747v2_alt 350136 124 + 729520 tttcactcttgttgcccaggctggagtgtaatggtgcaatcttggctcccgggttcaagcgattctcctgtctcggcctcctgagtagctgggattacaggtgcgcaccaccatgcccagctaa s ponAbe2.chr19 56180834 124 + 60714840 tttcactcttgttgcccaggctggagtgcaatggtgcgatctctgctcccgggttcaagcgattctcctgtctctgcctcctgagtagctgggattacaggcacgcaccaccatgcccggctaa i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19767435 347 - 122678785 I e calJac3.chr22 3405342 0 - 49145316 C e nomLeu3.chr10 3920499 0 + 106955855 C e chlSab2.chr6 3695015 1091 - 50890351 I e papAnu2.chr19 3794564 2044 - 51301725 I e macFas5.chr19 3825976 8745 - 59248254 I e rheMac3.chr19 3842523 5929 - 64156825 I e panTro4.chr19 4223968 13529 - 63644993 I a score=14419.000000 s hg38.chr19_GL949747v2_alt 350260 69 + 729520 ttttgtatttttagtagagacggggtttctccatgttggtcaagctggtctcgaactcccgacctcagg s ponAbe2.chr19 56180958 69 + 60714840 ttttgtatttttagtagagacagggtttctccatgttggtcaggctggtctcaaactcccaacctcagg i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47077844 67 + 50890351 ttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgtcctcg-- i chlSab2.chr6 I 179 C 0 e canFam3.chr1 19767435 347 - 122678785 I e calJac3.chr22 3405342 0 - 49145316 C e nomLeu3.chr10 3920499 0 + 106955855 C e papAnu2.chr19 3794564 2044 - 51301725 I e macFas5.chr19 3825976 8745 - 59248254 I e rheMac3.chr19 3842523 5929 - 64156825 I e panTro4.chr19 4223968 13529 - 63644993 I a score=30478.000000 s hg38.chr19_GL949747v2_alt 350329 59 + 729520 tgatccgcccaccttggcatcccaaagtgctgagattacaggcgtgagccactgcaccc s panTro4.chr19 59295696 59 + 63644993 tgatccgcccaccttggcctcccaaagtgctgagattacaggcatgagccaccgcaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56181027 59 + 60714840 tgatccacccaccttggcctcccaaagtgctgagattacaggcgtgagccaccgcaccc i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47077911 59 + 50890351 tgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcaccg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19767435 347 - 122678785 I e calJac3.chr22 3405342 0 - 49145316 C e nomLeu3.chr10 3920499 0 + 106955855 C e papAnu2.chr19 3794564 2044 - 51301725 I e macFas5.chr19 3825976 8745 - 59248254 I e rheMac3.chr19 3842523 5929 - 64156825 I a score=15329.000000 s hg38.chr19_GL949747v2_alt 350388 12 + 729520 ggccGACTAATT s panTro4.chr19 59295755 12 + 63644993 ggcTGACTAATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56181086 12 + 60714840 agccGACTAATT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60181920 12 + 64156825 ggcTGACTAATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55282238 12 + 59248254 ggcTGACTAATT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47077970 12 + 50890351 ggccGACTAATT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19767435 347 - 122678785 I e calJac3.chr22 3405342 0 - 49145316 C e nomLeu3.chr10 3920499 0 + 106955855 C e papAnu2.chr19 3794564 2044 - 51301725 I a score=63039.000000 s hg38.chr19_GL949747v2_alt 350400 41 + 729520 CATtttttaaacacacttcttacctgggaataaatttaaac s panTro4.chr19 59295767 41 + 63644993 CATtttttaaacacacttcttacctgggaataaatttaaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56181098 41 + 60714840 AATtttttaaacacacttctcacctgggaataaatttaaac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60181932 41 + 64156825 TATttcttaaacacacttcttacctgggaataaattcaaat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55282250 41 + 59248254 TATttcttaaacacacttcttacctgggaataaattcaaat i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47077982 41 + 50890351 CATtttttaaacacacttcttacctgggaataaattcaaat i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19767782 41 - 122678785 CATtttttaaacaaacgtcttaccctaaaataacgctagat i canFam3.chr1 I 347 C 0 e calJac3.chr22 3405342 0 - 49145316 C e nomLeu3.chr10 3920499 0 + 106955855 C e papAnu2.chr19 3794564 2044 - 51301725 I a score=728440.000000 s hg38.chr19_GL949747v2_alt 350441 357 + 729520 ttgcaaaagagttgcagaggtacagagagttcccatatgcccttcatccaggtccctctaatgttcatgctttacacgaccccagcacatccgccaaaaaaaaaaaaaaattaacactggtacaataatt----aactgacaggctttctttggatttcatcatcttt----ccaccaacgttctttgcctgtgctgggatccaatgcaggGGCACCGTcctgcatttacttccctctctgtt--aactgcagagaagggtttctgttttcctggttggaccctgattaataTTCCCCTAGTATCTGAACTCCAGGTGCCCAGGAAGGTTGGGGGGCAAGGATGTGCTGCCCACTGGGGA-AGGAGTG s panTro4.chr19 59295808 353 + 63644993 ttgcaaaagagttgcagagatacagagagttcccatatgcccttcatccaggtccctctaatgttcatgctttacatgaccccagcacatccgccaaaaaaaaaaa----ttaacactggtacaataatt----aagtgacaggctttctttggatttcatcatcttt----ccactaacgttctttgcctgtgctgggatccaatgcaggGGCACTGTcctgcatttacttccctctctgtt--aactgcagagaagggtttctgttttcctggttggaccctgattaataTTCCCCTAGTATCTGAACTCCAGGTGCCCAGGAAGGTTGGGGGGCAAGGGTGTGCTGCCCACTGGGGA-AGGAGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56181139 355 + 60714840 ttgcagaagagttgcagagatacagagagttcccatatgcccttcatccaggtccctctaatgttcatgctttacacgaccccagcacatccgccaaaaagaaaaa-aaattaacactggtacaataatt----aaatgatgggctttctttggatttcatcaccttt----ccactaacgttctttgcctgtgctgggatccaatgcaggGGCACCGTCCT-catttacttccctctctgtt--aactgcagagaagggtttctgttttccttgttggaccttgattaataTTCCCCTAGTATCTGAATACCAGGTGCCCAGGAAGGATGGGGGGCAAGGGTTTGCTGCCCACTAGGGA-AGGTGTG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60181973 356 + 64156825 ttgcagaagagttgcagagatacagagagttcctatatgcccttcattcagatccttctaatgttcatgctttacacgaccccagcacatctgccagaaagaaaaa--aattaacactgatacagtaatta---aaatgacaggttttatttagatttcatcaccttt----ccactaatgttctttgcctgtgctgagatccaatgcaggGGCACCATcctgcctttacttccctctctgtt--aactgtagagaagggtttctgttttcctagttgggccctgattaataTTCCCCTAGTATCTGAATACCAGGTGCCCAGGAAGGATGGGGGGCAAGGGTGTGGTGCCCACTAGGGA-AGGAGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55282291 356 + 59248254 ttgcagaagagttgcagagatacagagagttcctatatgcccttcattcagatccttctaatgttcatgctttacacgaccccagcacatctgccagaaagaaaaa--aattaacactgatacagtaatta---aaatgacaggctttatttagatttcatcaccttt----ccactaatgttctttgcctgtgctgagatccaatgcaggGGCACCGTcctgcctttacttccctctctgtt--aactgtagagaagggtttctgttttcctagttgggccctgattaataTTCCCCTAGTATCTGAATACCAGGTGCCCAGGAAGGATGGGGGGCAAGGGTGTGGTGCCCACTAGGGA-AGGAGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47380653 355 + 51301725 TTGCAGAAGAGTTGCAGAGATACAGAGAGTTCCCGTATGCCCTTCATCCAGATCCCTCTAATGTTCATGCTTTACACGACCCCAGCACATctgccagaaagaaaaa--aattaacactgaTACAATAATT----AAATGACAGGCTTTATTTAGATTTCATCACCTTT----CCACTAATGTTCTTTGCCTGTGCTGGGATCCAATGCAGGGGCACCGTCCTGCCTTTACTTCCCTCTCTGTT--AACTGTAGAGAAGGGTTTCTGTTTTCCTAGTTGGGCCCTGATTAATATTCCCCTAATATCTGAATACCAGGTGCCCAGGAAGGATGGGGGGCAAAGGTGTGGTGCCCACTAGGGA-AGGAGTG i papAnu2.chr19 I 1588 C 0 s chlSab2.chr6 47078023 355 + 50890351 ttgcagaagagttgcagagatacagagagttcccagatgcccttcatccagatccctctaatgttcatgctttacacgaccccagcacatctgccagaaagaaaaa--aattaacactgatacagtaatt----aaatgacaggctttatttcgatttcatcaccttt----ccactaatgttctttgcctgtgctgggatccaatgcaggGGCACCGTcctgcctttacttccctctctgtt--aactgcagagaagggtttctgttttcctagttgggccctgattaataTTCCCCTAGTATCTGAATACCAGGTGCCCAGGAAGGATGGGGGGCAAGGGTGTGGTGCCCACTAGGGA-AGGTGTG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19767823 351 - 122678785 ttgcagagaagttgcaaagccccagagagttcccacatgcccttcatccaga-ctctctaacatcaatattttgcataaccaggccccatctgtcaaaaccaagca---attaacattgatacagtaattaactaaactacagactgtatttggatgttatccattttttccccgctaatgttctttccctgtgccaggattcaattcagagt--acATATtgcattgacttctttctctttttcaaatacataaaagactttctgttttcctggttggatcctaattaatacTCTCAACATACCTGCATA-----TGCCCAGGAA-GATGTGGG-----GATGGGTTGGCAACTTAGAATAGGAATG i canFam3.chr1 C 0 C 0 e calJac3.chr22 3405342 0 - 49145316 C e nomLeu3.chr10 3920499 0 + 106955855 C a score=614271.000000 s hg38.chr19_GL949747v2_alt 350798 244 + 729520 GCTGGCAGAATCGACATCCGTCTGTTCCTCCACAATCCAAGGTCACAGAACACAT--GGGCAGTTATTCTGGG----TTTTTCCATAAGAAGGGTGATACAGAGCTGTCGTTGTTCCATATTAT--GAGGACCCCTCCACCTTTGCATTCCTCTAAGACCTTTCCTCTGAGACTCTC-CTCCA-AGCTGGAGAAGACAAGCTACATGCTTATGTCCAAGGCATGCTGCAGATTCAGCATGGCACAGCTCCCTCA s panTro4.chr19 59296161 244 + 63644993 GCTGGCAGAATCGACATCCGTCGGTTCCTCCACAATCTAAGGTCACAGAACCCAT--GGGCAGTTATTCTGGG----TTTTTCCATAAGAAGGGTGATACAGAGCTGTCGTTGTTCCATATTGT--GAGGACCCCTCCACCTTTGCATTCCTCTAAGACCTTTCCTCTGAGACTCTC-CTCCA-AGCTGGAGAAGACAAGCTACATGCTTATGTCCAAGGCATGCTGCAGATTCAGCACGGCACAGCTCCCTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56181494 246 + 60714840 GCTGGCAGAATCGACATCTGTCGGTTCCTCCACAGTCTAAGGTCACAGAACACAT--GGGCAGTTATTCTGGG----TTTTTCCATAAGAAGGGTGATACAGAGCTGTCGTTGTTCCATATTATCAGAGGACCCCTCCACCTTTGCATTCCTCTAAGACTTTTCCTCTAAGACTTTC-CTCCA-AGCTGGAGAAGGCAAGCTACACGCTTATGTCCAAGGCATGCTGCAGACTCAGCACGGCACAGCTTCCTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920499 202 + 106955855 GCGGACAGAATCGAC-------------------GTCAAAGGTCACAGAACACGT--GGGCAGTTATTCTGGG----GTTTTCCGTAAAAGGGGTGATGCAGAGCTGTCATCGTTCCATATTCTCAGAGGGCCCCTCCACCTTTGCATTCCTCTA--------------AGACTTTA-ATCCC-AGCTGGAGA-----------ATGTCTGTGTCCAAGACATGCTACACATTCAGAACATCACAGCTTACTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60182329 232 + 64156825 GCTGGCAGAATCGGCATCTGTCGGTTCCTCCACAATCTAAGGTCACAGAAAACAT--GGGCAGTTACTCTGGG----TTTTTCCGTAAGAGGGGTGATACAGAGCTGTCGTTGTTCCATATTCTCAGAGGGCCCCTCCACCTTTGCATTCCTCTA--------------AGACTTTG-ATCCC-AGCTGGAGAAGGCAAGCTATATGCTTATGTCCAAGGCATGCCACAGACTCAGCACGGCACAGCGTCCTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55282647 232 + 59248254 GCTGGCAGAATCGGCATCTGTCGGTTCCTCCATAATCTAAGGTCACAGAAAGCAT--GGGCAGTTACTCTGGG----TTTTTCCGTAAGAGGGGTGATACAGAGCTGTCGTTGTTCCATATTCTCAGAGGGCCCCTCCACCTTTGCATTCCTCTA--------------AGACTTTG-ATCCC-AGCTGGAGAAGGCAAGCTATATGCTTATGTCCAAGGCATGCCACAGACTCAGCACGTCACAGCGTCCTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47381008 232 + 51301725 GCTGGCAGAATGGAAATCTGTCGGTTCCTCCACAATCTAAGGTCACAGAAAGCAT--GGGCAGTTATTCTGGA----TTTTTCCATAAGAGGGGTGATACAGAGCTGTCGTTGTTCCATATTCTCAGAGGGCCCCTCCGCCTTTGCACTCCTCTA--------------AGACTTTG-ATCCC-AGCTGGAGAAGGCAAGCTATATGCTTATGTCTAAGGCATGCCACAGACTCAGCACGGCACAGCGTCCTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47078378 233 + 50890351 GCTGGCAGAATGGACATCTGTCGGTTCCTCCACAATCTAAGGTCACAGAAAACAT--GGGCAGTTATTCTGGA----TTTTTCCGTAAGAGGGGTGATACAGAGCTGTCGTTGTTCCATATTCTCAGAGGGCCCCTCCACCTTTGCATTCCTCTA--------------AGACTTTTCCTCCA-AGCTGGAGAAGGCAAGCTATATGCTTATGTCCAAGGCATGCCACAGACTCAGCACGGCACAGCGTCCTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3405342 199 - 49145316 gctGACAGAATCCAC-------------------ATCAAAGGTCACAGAGCACAT---GGCAGTTATTCTGGG----TTTTTCCATA--AAGGGTGACACAGATCTGTCTCAGTTCCATATTCTCAGGGGGCCCCTTCACCTTTGCATTCCTCCA--------------AGACTTTG-ATCTC-AGCTGGAGAAG-----------GTTTAGGTTCAAGGTGTGCTACAGATCCAGCCTGGCACAGCTTCCTCA i calJac3.chr22 C 0 I 438 s canFam3.chr1 19768174 226 - 122678785 GCTGAAAGCACCAGTA-CTATAGGCTCCTCAGAAAACTGAGGTCATAGTGTCTATCAAGTTGGCTATTCTGGGTGGTTTTTTAGTTAGGGAAGGTGATGGGTAGCTATCATCCCTCACTCCTCTTAGAAAGCCCCTCAGCCTTTGTATTCTTCTA--------------AAATTTTT-ATCCCAAACTGGAGA-----------ATATTGATGT-TAAGGCTCAGTATGGGATAAGCAGAGCACACCTTCCTCC i canFam3.chr1 C 0 C 0 a score=31275.000000 s hg38.chr19_GL949747v2_alt 351042 9 + 729520 CTCAAAAAC s panTro4.chr19 59296405 9 + 63644993 CTCAAAAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56181740 9 + 60714840 CTCAAAAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920701 9 + 106955855 CTCAAAAAT i nomLeu3.chr10 C 0 I 307 s rheMac3.chr19 60182561 9 + 64156825 CTCAAAAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55282879 9 + 59248254 CTCAAAAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47381240 9 + 51301725 CTCAAAAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47078611 9 + 50890351 CTCAAAAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3405979 9 - 49145316 CTCAAAAAC i calJac3.chr22 I 438 C 0 s canFam3.chr1 19768400 9 - 122678785 AGCAAAACC i canFam3.chr1 C 0 C 0 a score=484979.000000 s hg38.chr19_GL949747v2_alt 351051 171 + 729520 GTTACTTGATGTGGGATGCACAGGCATAGAGTAGTGATTCTCACACTAGACTCAGATACATACACAATATTTGCAACTTAAAT-----TAAACACCAATTAAATGTCAAGTGGAAAGACAACATCTACAGAAATAAAATGACACAAGATGCAATGTGAAATGTCATTAAAAGAAGA s panTro4.chr19 59296414 176 + 63644993 GTTACTTGATGTGGGATGCACAGGCATAGAGTAATGATTCTCACACTAGACTCAGATACATACACAATATTTGCAACTTAAATCAAATTAAACACCAATTAAATGTCAAGTGGAAAGACAACATCTACAGAAATAAAATGACACAAGATGCAATGGGAAATGTCATTAAAAGAAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56181749 176 + 60714840 GTTACTTGGTGAGGGATGCACAGGCATGAAGTAATGATTCTCACACTAGATTCAGATACATACACAATATTTGCAACTTAAATCCGATTAAATACCAATTAAAAGTCAAGTGGAAAGACAACATCTACATAAATAAAATGACATAAGATGCAACGTGAAATGTCATTAAAAGAAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3921017 176 + 106955855 GTTACTTGGTGTCGGATGCACGGGCATGGAGTAATGATTCTCACACCAGACTCAGATACATACACAATATTTGCAACTTAAATCAAATTGAACACCAATTAAATGTCAAGTGGAAAGACAACATCTACAGAAGTAAAATGACATAAGATGCAACGTGAAATGTCATTCAAAGAGGA i nomLeu3.chr10 I 307 C 0 s rheMac3.chr19 60182570 166 + 64156825 GTTACTTGGTGTGGGATGCACAGGCATGGAGTAATGATTCTCACACTAGACTCAGATACACACACTATATTAGCGACT----------TAAACACCAATTAAATGTCAAGTGCAAAGACGACATCTGCATAAACAAAATGACGTAAGATACAACGTGAAACGTCATTCAAAGAAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55282888 166 + 59248254 GTTACTTGGTGTGGGATGCACAGGCATGGAGTAATGATTCCCACACTAGACTCAGATACACACACAATATTAGCGACT----------TAAACACCAATTAAATGTCAAGTGCAAAGACGACATCTGCATAAACAAAATGACGTAAGATACAACGTGAAACGTCATTCAAAGAAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47381249 166 + 51301725 GTTACTTGGTGTGGGATGCACAGGCATGGAGTAATGATTCTCACACTAGACTCAGATACACACACTATATTAGCGACT----------TAAACACCAATTAAATGTCAAGTGCAAAGACAACATCTGCATAAACAAAATGACGTAAGATATAACGTGAAATGTCATTCAAAGAAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47078620 166 + 50890351 GTTACTTGGTGTGGGATGCACAGGCATGGAGTAACGATTCTCACACTAGACTCAGATACACACACAATATTAGCGACT----------TAAACACCAATTAAATGTCAAGTGGAAAGACGACAACTGCATAAACAAAATGACGTAAGATACAACGTGAAATGTCATTCAAAGAAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3405988 161 - 49145316 -----ATGACTTGGGATGCACAGGCATGGAGTAACAATTCTCACACTAGATTCAGATACATACATAATATTTGAAAAAAAAAT-----TACATACCAATTAAACGTCAGGTGGAAACACGACATCTACATGAATAAAATGACCTAAGATGCAATGTGAAATGTCCTT-----AACA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19768409 140 - 122678785 -TTTCCT-------------------TGGACTGATGTTTCCTTTAATAGATTCGGATACATATAC---ATTTGCTGAT----------TAAATATAAGCTAAATGTT---TGCAAAGGCAAAATCTATAGAAATACAGTGATATAAGATGCAACATGAAATGTTACTAAAAGGTGA i canFam3.chr1 C 0 I 547 a score=507726.000000 s hg38.chr19_GL949747v2_alt 351222 163 + 729520 GTTTGCATTAGAATAGTTCAAATATTTCAAAACTATTCCAGCA--CGTCACTGCGTTGCTGACCTATCTTCCTCCTGAGATGTGGTCGCCGTAATGATCTCAAGCTTGGACCTCGTGGACAGACTGGGGAACTCAAGCTAAACCCCGGTCCTCAC--AGTTCTGCAC s panTro4.chr19 59296590 163 + 63644993 GTTTGCATTAGAATAGTTCAAATATTTCAAAACTATTCCAGCA--CGTCACTGCGTTGCTGACCTATCTTCCTCCTGAGATGTGGTCGCCGTAATGATCTCAAGCTTGGACCTCGTGGACAGACTGGGGAACTCAAGCTAAACCCCGGTCCTCAC--AGTTCTGCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56181925 164 + 60714840 GTTTGCATTAGAATAGTTCAAATATTTCAAAACTATTCCAGCAC-CATCACTGTGTTGCTGACCTATCTTCCTCCTGAGATGTGGTCGCCATAATGATCTCAAGCTTGGACCTCGTGGACAGACTGGGGAACTCAAGCTAAACCCTTGTCCCCAC--AGTTTTGCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3921193 163 + 106955855 GTTTGCATTAGAATACTTCAAATATTTCAAAACTATTCCAGCA--CATCACTGCACTGCTGACCTATCTTCCTCCTGAGATGTGGTCACCGTAATGATCTCAAGCTTGGACCTCGTGGACAGACTGGGGAACTCAAGCTAAACCCTGGTCCTCAC--AGTTCTGCAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60182736 166 + 64156825 GTTTGCATTAGAATAGTTCAAATATTTCAAAACTATTCCAGCAC-GGTCACTGCGTTGCTGACCAGTCTTCCTCCTGACATGTGGTTGCCGTAGTGATCTCAGGCTTGGACCTCGTGGACAGACTGGGGAACTCAAGCTAAACCCTGGTCCTCACAGAGTTCGGCAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55283054 166 + 59248254 GTTTGCATTAGAATAGTTCAAATATTTCAAAACTGTTCCAGCAC-GGTCACTGCGTTGCTGACCAGTCTTCCTCCTGACATGTGGTTGCCGTAGTGATCTCAGGCTTGGACCTCGTGGACAGACTGGGGAACTCAAGCTAAACCCTGGTCCTCACAGAGTTCGGCAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47381415 166 + 51301725 GTTTACATTAGAATagttcaaatatttcaaaactgtTCCAGCAC-GGTCACTGCGTTGCTGACCAGTCTTCCTCCTGACGTGTGGTTGCCATAATGATCTCAAGCTTGGACCTCATGGACAGACAGGGGAACTCAAGCTAAACCCTGGTCCTCACAGAGTTCGGCAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47078786 166 + 50890351 GTTTGCATTAGAATAGTTTAAATATTTCAAAACTGTTCCAGCAC-AGTCACTGCGTTGCTGACCAGTCTTCCTCCTGACATGTGGTTGCCGTAATGATCTCAGGCTTGGACCTCGTGGACAGACTGGGGAACTCAAGCTAAACCCTGGTCCTCACAGAGTTTGGCAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3406149 166 - 49145316 GTTTGCATTAGAATAGTTCAAATATTTCAAAAATATTCCAGTAT-GGTCACTGTGTTGCTGACCAGTGTTTCTCGTGAGATGTGGTCGACGTAATGATCCCAAGCTTGGACCTCATGGACAGACCGGGGGACTCAAGGTAAGCCCTGGTCCTCACAGAATTCTgcac i calJac3.chr22 C 0 I 35 s canFam3.chr1 19769096 149 - 122678785 GTTCACATCAGAATAACCCAACTATTCAAAAAATACCACAGCGTGGGTCACTCCTTGA--GATCAG---TCCTCCCGGGACTTTGATGGGGTAAT-------------GACCTCATAGACGCCTTGTGGTTCCCGAGCTGGATCCTAGTCCTCAGAAGGTTCTGCAC i canFam3.chr1 I 547 C 0 a score=1687042.000000 s hg38.chr19_GL949747v2_alt 351385 686 + 729520 GTTGCAATCCTGTGTCGTTCCGT------CCA-------ATCTAATCCAATCTCAAGGACCCCAGTTCCTGAGCAACCCTGGCTTGGCTCGGCCAAAGGGAAGCGTCTACAGAATCTGAGTCTAGAATGCCCGGAGGTCTGTACTTCTTGCTGTTTTCAGGAGATTCAACTGCAAAGCCCTCCCCAAGTCATCCACATTGGCTCACGTTTCTGTGCCCCACCCTTCCTGCCTGGGAGGACCCTTCTTGTTCAGCC-AAAAAAG--CAACCTGAGGGTGGGGTGGTAGCAGGGACTCACCCATTTCTCTTTCCATCTTCTGTCGCGGATG--------------CAACCCTGGAAGGAAGACCTCAGGACGATGAT-CATCTTCATAGGATTCC---CGACCTGT-GCCTGGCTTTGTCCTGAATATTAGCCTTGGCAGCCTGGCCTGGGCTCCGATGGTGGATGAACTTGGCTTTCCACGGGCTGCCACCTCCAGCCTGCGCTGTGGAGAGACCAGATCCTCGGAACAGTATTTTAACCTTGTCCTCCTTTCCCTTCCAGGGTTTACCAAGACATAGCGGGTGTCATAGATGTGAAAAAGCTTCTGCTATACCAGGGTCAGGAACGGAGCAAAACTGAAAACCGCACAGGATGTGGTCTGCCAGGTGCCAGCATCACAGCTCAAATCCTTAAGAAGCTC-CAGCCGCAGGCACGGAAATAAA s panTro4.chr19 59296753 686 + 63644993 ATTGCAATCCTGTGTCGTTCCGT------CCA-------ATCTAATCCAATCTCAAGGACCCCAGTTCCTGAGCAACCCTGGCTTGGCTCAGCCAAAGGGAAGCGTCTACAGAATCTGAGTCTAGAATGCCCGGAGGTCTGTACTTCTTGCTGTTTTCAGGAGATTCAACTGCAAAGCCCTCCCCAAGTCATCCACATTGGCTCACGTTTCTGTGCCCCACCCTTCCTGCCTGGGAGGACCCTTCTTGTTCAGCC-AAAAAAG--CAACCTGAGGGTGGGGTGGTAGCAGGGACTCACCCATTTCTCTTTCCATCTTCTGGCCCGGATG--------------CAACCCTGGAAGGAAGACCTCAAGACGATGAT-CATCTTCATAGGATTCC---CGACCTGT-GCCTGGCTTTGTCCTGAATGTTAGCATTGGCAGCCTGGCCTGGGCTCTGATGGTGGATGAACTTGGCTTTCCACGGGCTGCCACCTCCAGCCTGCGCTGTGGAGAGACCAGGTCCTCGGAACAGTATTTTAACCTTGTCCTCCCTTCCCTTCCAGGGTTCACCGAGACATAGCAGGTGTCATAGGTGTGAAAAAGCTTCTGCTATACCAGGGTCAGGAATGGAGCAAAACTGAAAACCGCACAGGATGTGGTCTGCCAGGTGCCAGCATCACAGCTCAAATCCTTAACAAGCTC-CAACTGCAGGCACGGAAATAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56182089 687 + 60714840 ATTGCAATCCTGTGTGGTTCCAT------CCA-------ATCTAATCCAATCTCAAGGACCCTATTTCCTGAGCAACCCTGGCTTGGCTCGGCCAAAGGGAAGCGTCTACAGAATCTGAGTCTAGAATGCCCGGAGGTCTGTACTTCTTGCTGTTTTCAGGAGATTCAACTGCAAAGCCCTCCCCAAGTCATCCACATTGGCTCATGTTTCTGTGCCCCACCCTTCCTGCCTGGGAGGACCCTTCTTGTTCAGCCAAAAAAAG--CAACCTGAGGGTGGGGTGGTAGCAGGGACTCACCCATTTCTCTTTCCATCTTCTGGCCCGGATG--------------CAACCCTGGAAGGAAGACCTCAGGACGATGAT-CATCTTCATAGGATTCC---CGACCTGT-CCCTGGCTTTGTCCTGAATATTAGCCGTGGCATCCTGGCCTGGGCTCCGATGGTGGATGAACTTGGCTTTCCATGGGCTGCCACCTCCAGCCTGCGCTGTGGAGAGACCAGGTCCTTGGAACAGTATTTTAACCTTGCCCTCCTTTCCCTTCCAGGGTTTACCAAGACATAGCAGGTGTCATAGATGTGAAACAGCTTCTGCTATACAAGGGTCAGGAACTGAGCAAAACTGAAAAACACACAGGATGTCGTCTGCCAGGTGCCAGCATCACAGCTCAAATCTTTAACAAGGTC-CAACCACAGGCACGGAAATAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3921356 686 + 106955855 ATTGCAATCCTGTGTCATTCCGT------CCA-------ATCTAATCCAATCTCAAGGACCCCAGTTCCTGAGCAACCCTGGCTTGGCTCGGCCAAAGGGAAGCGTCTACAGAATCTGAGTCTAGAATGCCCGGAGGTCTGTACTTCTTGCTGTTTTCAGGAGATTCAACTGCAAAGCCCTCCCCAAGCCATCCACATTGGCTCACGTTTCTGCACCCCACCCTTCCTACCTGGGAGGACCCTTCTTGTTCAGCC-AAAAAAG--CAACCTGAGGGTGGGGTGGTAGCAGGGACTCACCCATTTCTCTTTCCATCTTCTGGCCCGGATG--------------GAACCCTGGAAGGAAGACCTCAAGATGATGAT-CATCTCCACAGGATTCC---CCACCTGT-CCCTGGCTTTGTCCTGAATATCAGCCTTGGCAGCCTGGCCTGGGCTCCCCTGGAGGATGAACTTGGCTTTCCACAGGCTGCCACCTCCAGCCTGCACTGTGGAGAGACCAGGTCCTCGGAACAGCATTTTAACCTTGTCCTCTCCTCTCTTCCAGGGTTTACCAAGACATAGCAGGTGTCATAGAAGTGAAAAAGCTTCTGCTGTACCAAGGTCAGGAATTGAGCAAAACTGAAAAACACACAGGATGTGGTCTGCCAGGTGCCAGCATCACAGCTCAAATCTTTAACAAGGTC-CAACCACAGGCACGGAAATAAA i nomLeu3.chr10 C 0 I 8033 s rheMac3.chr19 60182902 685 + 64156825 ATTGCAACCCTGTGTCTTTCCTT------CCA-------ATAGAATCCAATCTCAAGGTCCCCAGTTCCTGAGCAGCCCTGGCTTGGCTCAGCCAAAGGGAGGTGTCTAGAGAATCTGAGTCTAGACTGCCCGGAGGTCTGCACTTCTTGCCGTTTTCAGGAGATTCAACTGCAAAGCCCTCCCCAGGTCATCCACATTGGCTCACGTGTCTGTGCCCCACCCTTCCTGCCTGGGAGAAGCC-TCTTGTTCAGCC-GAAAAAG--CAACCTGAGGGTGAGGTGGTAGCAGGGACTCACCCACGTCTCTGGCCATCTTCAGGCCCGGATG--------------GAGCCCTGGAAGGAAGACCTCAAGACGATGGT-CATCTCCACAGGATTCC---CACCCTGC-CCCTGGCTTTGTCCTGAATATTAGCCTTGGCGGCCTGGCCTGGGTTCCGATGCTGGATGAACCTGGCTTTCCACGGGCTCCCACCTCCAGCCTGCGCTGTGGAGAGACCAGGTCCTCGGAACCGTATTTTAACCTTGTCCTCCCTTCCCTTCCGGGGTTTACCAAGACATAGCGGGTGTCGTAGATGTGAAAATGCTTCTGCTATACCAGAGTCAGGAACTGAGCAAAACTGAAAAATGCCAAGGATGTGGTCCGCCAGGTGCTAGCATCACAGCTCTAATCTTTAACAAGGTC-CAACCGCAGGCACGGAAATAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55283220 685 + 59248254 ATTGCAATCCCGTGTCTTTCCTT------CCA-------ATAGAATCCAATCTCAAGGTCCCCAGTTCCTGAGCAGCCCTGGCTTGGCTCAGCCAAAGGGAGGTGTCTAGAGAATCTGAGTCTAGACTGCCCGGAGGTCTGCACTTCTTGCCGTTTTCAGGAGATTCAACTGCAAAGCCCTCCCCAGGTCATCCACATTGGCTCACGTGTCTGTGCCCCACCCTTCCTGCCTGGGAGAAGCC-TCTTGTTCAGCC-GAAAAAG--CAACCTGAGGGTGAGGTGGTAGCAGGGACTCACCCATGTCTCTCGCCATCTTCGGGCCCAGAGG--------------GAGCCCTGGAAGGAAGACCTCAAGACGATGGT-CATCTCCACAGGATTCC---CACCCTGC-CCCTGGCTTTGTCCTGAACATTAGCCTTGGCGGCCTGGCCCGGGTTCCGATGCTGGATGAACCTGGCTTTCCACGGGCTCCCACCTCCAGCCTGCGCTGTGGAGAGACCAGGTCCTCGGAACCGTATTTTAACCTTGTCCTCCCTTCCCTGCCGGGGTTTACCAAGACATAGCGGGTGTCGTAGATGTGAAAATGCTTCTGCTATACCAGAGTCAGGAACTGAGCAAAACTGAAAAATGCACAGGATGTGGTCTCCCAGGTGCTAGCATCACAGCTCTAATCTTTAACAAGGTC-CAACCGCAGGCACGGAAATAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47381581 684 + 51301725 ATTGCAATCCCGTGTCTTTCCTT------CCA-------ATCGAATCCAATCTCAAGGTCCCCAGTTCCTGAGCAGCCCTGGCTTGGCTCAGCCAAAGGGAAGTGTCTAGAGAATCTGAGTCTCGACTGCCCGGAGGTCTGCACTTCTTGCCGTTTTCAGGAGATTCAACTGCAAAGCCCTCCCCAGGTCATCCACATTGGCTCACATTTCTGTGCCCCACCCTTCCTGCCTGGGAGAAGCC-TCTTGTTCAGCC-AAAAAAG--CAACCTGAGGGTGAGGTGGTAGCAGGGACTCACCCATGTCTCTCGCCATCTTCGGGCCCCGATG--------------GAGCCGTGGAAGGAAGACCTCAAGACGATGGT-CATCTCCACAGGATTCC---CACCCTGC-CCCTGGCTTTGTCCTGAATATTAGCCTCGGCGGCCTGGCCCGGGTTCCGATGGTGGATGAACCTGGCTTTCCACGGGCTCCCACCTCCAGCCTGCGCTGTGGAGAGACCAGGTCCTCGGAACCCTATTTTAACCTTGTCCTCCCTTCCCTGCCAGGGTTTACGAAGACATAGCGGGTGTCGTAGATGTGAAAATGCTTCTGCTATACCAGAGTCAGGAACTGAGTAAAACAG-AAAATGCCCAGGATGTGGTCCGCCAGGTGCTAGCATCACAGCTCTAATCTTTAACAAGATC-CAACCGCAGGTACAGAAATAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47078952 684 + 50890351 ATTGCAATCCCGTGTCTTTCCTT------CCA-------ATCGAATCCAATCTCAAGGACCCCAGTTCCTGAGCAGCCCTGGCTTGGCTCAGCCAAAGGGAAGTGTCCAGAGCATCTGAGTCTCGACTGCCCGGAGGTCTGCACTTCTTGCCGTTTTCAGGAGATTCAACTGCAAAGCCCTCCCCAGGTCATCCACATTGGCTCCCGTGTCTGTGCCCCACCCTTCCTGCCTGGGAGAAGCC-TCTTGTTCAGCC-GAAAAAG--CAACCTGAGGGTGAGGTGGTAGGAGGGACTCACCCATGTCTTTCGCCATCTTCGGGCCCGGAGG--------------GAGTCCTGGAAGGAAGACCTC-AGACGATGGT-CATCTCCATAGGATTCC---CACCCTGC-CCCTGGCTTTGTCCTGAATATTAGCCTTGGCGGCCTGGCCTGGGTTCCGATGGTGGATGAACCTGGCTTTCCACGGGCTCCCACCTCCAGCCTGCGCTGTGGAGACACCAGGTCCTCGGAACCGTATTTTAACTTTGTCCTCCCTTCCCTGCCGGGGTTTACGAAGACGTAGCGGGTGTCGTAGATGTGAAAATGCTTCTGCTATACCAGAGTCAGGAACTGAGCAAAACTGAAAAATGCACAGGATGTGGTCTCCCAGGTGCTAGCATCGTAGCTCAAATCTTTAACAAGGTC-CAACCGCGGGCACGGAAATAAA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19769245 637 - 122678785 AGTATGGCTCTGGGTCTCTCCCTTGTTACCCAAGGGAGTACCTGATTAGATCTCAAAGACCCATATTTCTGAGCATCAGGGGTCTG-------CAGA-----------ACAGAATCTGAGCCTAGCAGGCCCAAACGTCTCTGATTCCTGCTGTTTCCAGGAGACTGAACTGCAAAGTCCTCCCCAAGGCATCTGCATTAGCCCACACCTGTGTGCTCCATGACTTCTGCC------------TC---TTCAGAA-AAAAAAAATCAACCTAGGGGTAGGG-------ACTGACTAACCCACTTGGGTCCAGATCCTCTGGCCTTGTTGGAAGGAAGGCTCGTGAACAATGCAAGGAAGGCTCATGAATGATGATCCACTTCCACACAAATCCGAGCTCCCAGTAACTTGGTGTTATCCTGGCTCTGAGTCTGAGCAGGCTGGCCAGGAT----ATTGTCAGTGGACCCCACTTCCCACAGGCTCCCACC-----------CTTTGG---GACAGGATATTC-------CAGTATGACCCTTTCCTCCTGTCCCTTCCAGGACTTACGGAAAT-CAACGTGAG-----GATGTGAAAATGCTTCTGT------AGGATCTG-----GGGCACAGCTGAAAAATGTGCAGGATGTGGTGTGGGAGGCACCAACACCACCATTTAGATAGTCTGCGAGCTAGCAAT--CATCCATAAAAATGAA i canFam3.chr1 C 0 C 0 e calJac3.chr22 3406315 35 - 49145316 I a score=416711.000000 s hg38.chr19_GL949747v2_alt 352071 233 + 729520 CAGCTTCT-CCCTGCCCTGTATACGTCTCCGATTTTACCCAGGATGGGGCTGAGGAAGCAACACAGATTCCCAAACGTTACTTTTTTTTT-------------TTTATTTTGCTTGAGAGCCAAGGCAATATTAGACAAGCCTTAC-TCCCTAATTAGTGCCTGACAAGAACCATATCTCTGTCCCAATCCTTCTATTCAAAGTAGGCACAATTTGCTTTTACCAAATGTAAAACTCATGTCAAAgcc s panTro4.chr19 59297439 246 + 63644993 CAGCTTCT-CCCTGCCCTGTATACGTCTCCGATTTTACCCAAGATGGGGCTGAGGAAGCAACACAGATTCCCAAATGTTACtttttttttcctttttttttttttttttttGCATGAGAGCCAAGGCAATATTAGACAAGCCTTAC-TCCGTAATTAGTGCCTGACAAGAACCATATCTCTGTCCCAATCCTTCTATTCAAAGTAGGCACAATTTGCTTTCACCAAATGTAAAACTCATGTCAAAgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56182776 228 + 60714840 CAGCTTTT-CCCTGCCCTGTATACGTCTCCGATTTTACCCAGGGTGGGGCTGAGGAAGCAACTCAAATTCCCAAATATTACTTTTTTTTT------------------TTTGCATGACAGCCGAGGCAATATTAGACAAGCCTTAC-TCCCTAATTAGTGCCTGACAAGAACCACATCTGTGTCCCAATCCTTCTATTCAAAGTAGGCACAATTTGCTTTTACCAAATGTGAAACCCATGTCAAAgcc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60183587 230 + 64156825 CAGCTTCT-CCCTGCCCTGTACACGTCTCCAATTTTACCCAGGATGGGGCTGAGGAAGCAACACAGATTCACAAATTTTACTTTTTTTTT----------------TTCTTGCATGAGAGCCAAGGCAATATGAGGCAAGGCTTGC-TCCCTAGTTAGTGCCTGACAGGAACCGTATCTCCGTCCCAATCCTTCTATTCAAAGTAGGCGCAATTTGCTTTTACCAAATGTAAAACTCACGTCAAAAcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55283905 230 + 59248254 CAGCTTCT-CCCTGCCCTGTACACGTCTCCAATTTTACCCAGGATGGGGCTGAGGAAGCAACACAGATTCACAAATTTTACTTTTTTTTT----------------TTCTTGCATGAGAGCCAAGGCAATAGGAGGCAAGGCTTGC-TCCCTAATTAGTGCCTGACAGGAACCGTATCTCCGTCCCAATCCTTCCATTCAAAGGAGGCGCAATTTGCTTTTACCAAATGTAAAACTCACGTCAAAAcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47382265 229 + 51301725 CAGCTTCT-CCCTGCCCTGTACACGTCTCCAATTTTACCCAGGATGGGGCTGAGGAAGCAACACAAATtcacaaattttac-tttttttt----------------ttcttgcatgagAGCCAAGGCAATATGAGGCAAGGCTTGC-TCCCTAATTAGTGCCTGACAGGAACCGTATCTCCGTCCCAATCCTTCCATTCAAAGGAGGCGCAATTTGCTTTTACCAAATGTAAAACTCATGTCAAAACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47079636 230 + 50890351 CAGCTTCT-CCCTGCCCTGTATACATCTCCAATTTTACCGAGGTTGGGGCTGAGGAAGCAACACAAATTCACAAATTTTACTTTTTTTTT----------------TTCTTGCATGAGAGCTAAGGCAATATGAGGCAAGGCTTGC-TCCCTAATTAGTGCCTGACAGGAACCGTATCTCCGTCCCAATCCTTCTATTCAAAGTAGGTGCAATTTGGTTTTACCAAACGTGAAACTCATGTCAAAgcc i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19769882 211 - 122678785 TGGTTTTTGTTCTGCTCTGGGGGGCTCTCTGATATTCCCCAGGTT-GGGCTAAGAAGAGAACTTAGTTTTCTGGATA----------GTT----------------TCTTCACAGGAGACCCAGGGCTGTATCAGGTAA--CCTGCACCCCTGGTTAGTACA-GACATGAGCTCCATCTCTATCCAAG--CTTCATGTCAAAGAGATTGCAATTTGTTGTCACCAAAC-----ACTTATGTTAAAACC i canFam3.chr1 C 0 I 10665 e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3922042 8033 + 106955855 I a score=437533.000000 s hg38.chr19_GL949747v2_alt 352304 265 + 729520 atgctgtgagtatttacaccagagaaatcggcaaatgctacacgtcggggttgttttttgtttttctttttgc-tttttttttcagagagctgattgtcaagactttaccagcacactgctgGTAAATTTCCAAAGGCCAATTTAAAGAA----ATTTTTTTAACAGAACATGTAAAAAAAAA--TCAACGTGAAGTCAACATGCTCCAGGGAAATCAGACAATTGATAAAGCATGTCTATTTCTGTAGTGTATACTCCAGCCTGTTTCCCC s panTro4.chr19 59297685 266 + 63644993 atgctgtgagtatttacaccagagaaatcggcaaatgctacacgtcggggttgttttctgtttttctttttgc-tttttttttcagagagctgattgtcaagcctttaccagcacactgctgGTAAACTTCCAAAGGCCAATTTAAAGAA----ATTTTTT-AACAGAACATGTAAAAAAAAAAATCAACATGAAGTCAACATGCTCCAGGGAAATCAGACAATTGATAAAGCATGTCTATTTCTGTAGTGTATACTCCAGCCTGATTCCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56183004 267 + 60714840 atgctgtgagtatttacaccagaaaaattggcaaatgctacacgtcagggttgttttttgtttttctttttgcttttttttttcagagagctgattgtcaagcctttaccagcacactgctgGTAAATTTCCAAAGGCCAATTTAAAGAA----ATTTTTT-AACAGAACATGTAAAAAAAAAAATCAACGTGAGGTCAACATGCTCCAGGAAAATCAGACAATTGATAAAGAATGTCTATTTCTGTAGTGTATACTCCATCCTCTTTGCCC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60183817 266 + 64156825 gtggtgtgagtatttacaccagagaaatcggcaaacgctacacgtcagggttgttttttgtttttccttttgc-ttttttttacagagagctgatggtcaagcctttaccagcacaccactgGTAAATTTCCAAGGGCCAATTTAAAGAA-AAATTTTTTT-TACAGAACACATAAAAAAAA---TCAATGTGAAGTCAACATGCTCCAGGAAAATCAGAGAATTGATAAAGCATGACTATTTCTGTAGCACATACTCCACCCTGTTTCCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55284135 267 + 59248254 gtggtgtgagtatttacaccagagaaatcggcaaacgctacacgtcagggttgttttttgtgtttccttttgc-tttttttttcaaagagctgatggtcaagcctttaccagcacaccactgGTAAATTTCCAAGGGCCCATTTAAAGACTTTTTTTTTTT-TGCAGAACACGTAAAAAACA---TCAACGTGAAGTCAACATGCTCCAGGAAAACCAGAGAATTGATAAAGCACGACTATTTCTGTAGCACATACTCCACCCTGTTTCCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47382494 265 + 51301725 GTGGTGTGAGTATTTACACCAGAGAAATCGGCAAACGCTACACGTCAgggttgttttctgtgtttccttttgc-ttcttttttcaaaGAGCTGATGGTCAAGcctttaccagcacaccactggtaAATTTCCAAGGGcccatttaaagaa--atttttttt-tgcagaacaTGTAAAAAACA---TCAACGTGAAGTCAACATGCTCCAGGAAAACCAGAGAATTGATAAAGCATGACTATTTCTGTAGTGTATACTCCACCCTGTTTCCCC i papAnu2.chr19 C 0 M 1175 s chlSab2.chr6 47079866 266 + 50890351 gtggtgtgagtatttacaccagagaaatcggcaaatgctacgcgtcagggttgttttctgtttttccttttgc-tttttttttcagagagctgatggtcaagcctttaccagcacaccactgGTAAATTTCCAAGGGCCCATTTAAAGAA-AATTTTTTTT-TACAGAACACGTAAAAAACA---TCAACGTGAAGTCAACATGCTCCAGGAAAACCAGAGAATTGATAAAGCATGACTATTTCTGTAGTGTATACTCCACCCTGTTTCCCC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3922042 8033 + 106955855 I a score=182518.000000 s hg38.chr19_GL949747v2_alt 352569 104 + 729520 CTCCTACCTCAGGTACCGTAACCAGCATCTGAAGTCTTATATTCAAATTTCCCTTGCACTTTTGTAAATATAGTGTTCTCTCATCGATGTACCTATTTGGTGTG s panTro4.chr19 59297951 104 + 63644993 CTCCTACCTCAGCTACCGTAACCAACATCTGAAGTCTTATATTCAAATTTCCCTTGCACTTTTGTAAATATAGTGTTCTCTCATTGATGTACCTATTTGGTGtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56183271 104 + 60714840 CTTCTACCTCAGCTACCGTAACCAGCATCTGAAGTCTTATATTCAAATTTCCCTTGCACTTTTGTAAATATAGTGTTCTCTCATCGATGTACCTATCTGGtgtg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60184083 104 + 64156825 CTCCTACCTCAGCTACCATAATCAGCATCTGAAGTCTTATGTTCAAATTTCCCTTGTACATTTGTATATATAGTGTTCTCTCATCGATGTGTCTATTTGGtgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55284402 104 + 59248254 CTCCTACCTCAGCTACCATAATCAGCATCTGAAGTCTTATGTTCAAATTTCCCGTGCACTTTTGTAAATATAGTGTTCTCTCATCGATGTGTCTATTTGGTGTG i macFas5.chr19 C 0 I 496 s papAnu2.chr19 3796608 100 - 51301725 CTCCTACCTCAGCTACCGTAATCAGCATCTGAAGTCTTATGTTCAAATTTCCCTTGCACTTTTGTATATACAGTGTTCTCTCATCGATGTATCTATttgg---- i papAnu2.chr19 I 2044 C 0 s chlSab2.chr6 47080132 104 + 50890351 CTCCTACCTCAGCTACCGTAATCAGCATCTGAAGTCTTATGTTCAAATTTCCCTTGCACTTTTGTAAATATAGTGTTCTCTCATCAATGTACCTATTTGGTGTG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3922042 8033 + 106955855 I a score=5993.000000 s hg38.chr19_GL949747v2_alt 352673 5 + 729520 tatgt s panTro4.chr19 59298055 5 + 63644993 tatgt i panTro4.chr19 C 0 I 26 s ponAbe2.chr19 56183375 5 + 60714840 tatgt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60184187 5 + 64156825 tgtgt i rheMac3.chr19 C 0 I 269 s macFas5.chr19 55285002 5 + 59248254 tatgt i macFas5.chr19 I 496 C 0 s chlSab2.chr6 47080236 5 + 50890351 TGTGT i chlSab2.chr6 C 0 I 371 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3922042 8033 + 106955855 I e papAnu2.chr19 3796708 0 - 51301725 C a score=8251.000000 s hg38.chr19_GL949747v2_alt 352678 22 + 729520 atatgtgtgtgtatatata--------------------------------------tat s panTro4.chr19 59298086 60 + 63644993 atatgtgtgtgtatatatacatatatatgtatatgtgtgtctgtgtgtatatatatatat i panTro4.chr19 I 26 C 0 s ponAbe2.chr19 56183380 22 + 60714840 gtgtgtatatatacatata--------------------------------------tat i ponAbe2.chr19 C 0 I 5 s macFas5.chr19 55285007 22 + 59248254 gtgtgtgtgcatgtatata--------------------------------------tat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3796708 21 - 51301725 -catgtgtgtgtatatata--------------------------------------tgt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3922042 8033 + 106955855 I e chlSab2.chr6 47080241 371 + 50890351 I e rheMac3.chr19 60184192 269 + 64156825 I a score=10028.000000 s hg38.chr19_GL949747v2_alt 352700 40 + 729520 atgctatca--tttaaaaat----------------------tgtatttatttatttaAGGTGG s panTro4.chr19 59298146 40 + 63644993 atGCTATCA--TTTAAAAAT----------------------TGTGTTTATTTATTTAAGATGG i panTro4.chr19 C 0 C 0 s macFas5.chr19 55285029 36 + 59248254 atGCTGTCG--TTTAAAAtt--------------------------tttatttatttaagatag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3796729 64 - 51301725 aggctgccatctttaaaatttatttatttatttattcattcatttattcatttatttgagacag i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e ponAbe2.chr19 56183402 5 + 60714840 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3922042 8033 + 106955855 I e chlSab2.chr6 47080241 371 + 50890351 I e rheMac3.chr19 60184192 269 + 64156825 I a score=1500.000000 s hg38.chr19_GL949747v2_alt 352740 1 + 729520 g s panTro4.chr19 59298186 1 + 63644993 g i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3930075 1 + 106955855 g i nomLeu3.chr10 I 8033 C 0 s macFas5.chr19 55285065 1 + 59248254 g i macFas5.chr19 C 0 I 10 s papAnu2.chr19 3796793 1 - 51301725 g i papAnu2.chr19 C 0 I 11 s chlSab2.chr6 47080612 1 + 50890351 g i chlSab2.chr6 I 371 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e ponAbe2.chr19 56183402 5 + 60714840 I e calJac3.chr22 3406315 35 - 49145316 I e rheMac3.chr19 60184192 269 + 64156825 I a score=208450.000000 s hg38.chr19_GL949747v2_alt 352741 134 + 729520 tcaccgaggctggagtgcaatggtgcaatctcagctcactgcagcctccacttcccaggctccagcgatcctcctgcctcagccttctgagtagctgggattataagggtgtgaccccatacccagctaatttt s panTro4.chr19 59298187 134 + 63644993 tcaccgaggctggagtgcaatggtgcaatctcagctcactgcagcctccacttcccaggctccagcgatcctcctgcctcagccttctgagtagctgggattataagggtgtgaccccatacccagctaatttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3930076 134 + 106955855 tcacccaggctagagggcagtggcaccatctcggctcactgcaacctctgcctccagagttcaagtgattctcctgcttcagcctcctgagtagctgggataacaggcacgtgctaccacgcccagataatttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60184461 133 + 64156825 tcaccgaggctggagtgcaatggtgcaatctcagctcactgcagcctccacttcccgggctccagcgatcctccagcctcagccatccgagtagctgggattacaggcacgtgacccca-acccagctaattgt i rheMac3.chr19 I 269 C 0 s macFas5.chr19 55285076 134 + 59248254 tcaccgaggctggagtgcaatggtgcaatctcagctcactgcagcctccacttcccaggctccagcgatcctcctgcctcagccatccgagtagctgggattacaggcacgtgaccccacacccagctaattgt i macFas5.chr19 I 10 C 0 s papAnu2.chr19 3796805 134 - 51301725 tcacccaggctggagtgcagtagcacaatctcagctcactgcagcctccacttcccgggctccagagatcctcccacctcagcctcctgagtagctgggaccacaagcacgtgccaccacactccacagatttt i papAnu2.chr19 I 11 C 0 s chlSab2.chr6 47080613 134 + 50890351 tcaccgaggctggagtgcaatggcacaatctcagctcactgcagcctccacttcccaggctccagtggtcctcctgcctcagccatccgggtagctgggattacaggcgcgtgaccccacacccagctaattgt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e ponAbe2.chr19 56183402 5 + 60714840 I e calJac3.chr22 3406315 35 - 49145316 I a score=231172.000000 s hg38.chr19_GL949747v2_alt 352875 115 + 729520 tg-----------tatgtttagtagagatggggtttcgccatgttgaccaggctggtcttgaactcctgccctcaggtgatctgcccgcctcagcctcccaaagtgctggaattacaggcatgagc s panTro4.chr19 59298321 115 + 63644993 tg-----------tatgtttagtagagatggggtttcgccatgttgaccaggctggtcttgaactcctgccctcaggtgatctgcccgcctcagcctcccaaagtgctggaattacaggcatgagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56183407 114 + 60714840 tg-----------tgtgtttagtagagatagggtttcgccatgttaaccaagct-gtcttgaactcctgccctcaggtgatctgcccgcctcagcctcccaaagtgctgagattataggcatgagc i ponAbe2.chr19 I 5 C 0 s nomLeu3.chr10 3930210 109 + 106955855 tg-----------tatttctagcagagat-gggttttgccatgttggccaggctggtctcgaactcctgacctcaggtgcttcatctgccttggcctcccaaagtgctgggattacaggcg----- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60184594 115 + 64156825 tg-----------tatgtttagtagagatggggtttcgctatgttgaccaggctggtcttgaactcctgccctcaggtgatctgctcgcctcagcctcccaaagtgctgggattacaggcatgagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55285210 115 + 59248254 tg-----------tatgtttagtagagatggggtttcgccatgttgaccaggctggtcttgaactcctgccctcaggtgatctgctcgcctcagcctcccaaagtgctgggattacaggcatgagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3796939 123 - 51301725 tgatttgttttattttgtttgatagagatggggttttttcttgttgcccaggctggtctcaaactcctgagttcaag---ctcacccacctcgtcctcccaaagtgctaggattataggtgtgagc i papAnu2.chr19 C 0 I 816 s chlSab2.chr6 47080747 115 + 50890351 tg-----------tatgtttagtagagatggggtttcgccatgttgaccaggctggtcttgaactgctgccctcaggtgatctccccgcctcagcctcccaaagtgctgagattacaggcatgagc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I a score=358357.000000 s hg38.chr19_GL949747v2_alt 352990 204 + 729520 tactgtgcccagccTCGTTTTTAATTTTAGTGcaaagtatagttttcaaaacaatgtttgcaatgtcatcaaatatagaatgagcacgcatcaatgtcttcttaattcattaatgatgaaatcaTCATTCAAAATTCCTGTCtttacccaaatatttagcttcttctgttgctcttcatttgttcctgcgtttctccatttcca s panTro4.chr19 59298436 204 + 63644993 tactgtgcccagccTCTTTTTTAATTTTAGTGcaaagtatagttttcaaaacactgtttgcaatgtcatcaaatacagaatgagcacgcatcaatgttttcttaattcattaatgatgaaatcaTCATTCAAAATCCCTATCtttacccaaatatttagcttcttctgttgctcttcatttgttcctgcgtttctccatttcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56183521 204 + 60714840 cactgtgcccagccTCTTTTTTAATTTTAGTGcaaagtatagttttcaaaacaatgtttgcaatgtcatcaaatatagaatgagcatgcatcaatgttttcttaattcattaatgatgaaatcattaTTCAAAATCCCTATCtttacccaaatatttagcttcttctgttgctcttcatttgttcctgcgtttctccatttcca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3930319 191 + 106955855 -------------CTCAATTTTAATTTTAGTGCAAAGTATAGTTTTCAAAACAATGTTTGCAATGTCATCAAATATAGAATAAGCATGCATCAATGTCTCCTTAATTCATTAATAATGAAATCATcattcaaaattcctatctttacccaaatatttagcttcttctgttgctcttcatttgttcctgcgtttctccatttcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60184709 204 + 64156825 cactgtcctcagccTCTTTTTTAATTTTAGTGcaaagtacagttttcaaaacaatgtttgcaatgtcatcaaatgtagaatgagcatgcatcaatgtttccttaattcattcatgatgaaatcaTCATCGAAAATTCCTGTCtttacccaaatatttagctgcttctgttgctcttcatttgttcctgcgtttctccatttcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55285325 204 + 59248254 cactgtcctcagccTCTTTTTTAATTTTAGTGCAAAGTACAGTTTTCAAAACAATGTTTGCAATGTCATCAAATACGGAATGAGCATGCATGAATGTTTCCTTAATTCATTCATGATGAAATCATCATTGAAAATTCCTGTCtttacccaaatatttagcttcttctgttgcttttcatttgttcctgcgtttctccatttcca i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47080862 204 + 50890351 cactgTCCTCAGACTCTTTTTTAATTTTAGTGCAAAGTACAGTTTTCAAAACAATGTTTGCAATGTCATCAAATACGGAATGAGCATGCATGAATGTTTCCTTAATTCATTCATGATGAAATCATCATTGAAAATTCCTGTCtttacccaaatatttagcttcttctgttgctcttcatttgttcctgcgtttctccatttcca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e papAnu2.chr19 3797062 816 - 51301725 I a score=727778.000000 s hg38.chr19_GL949747v2_alt 353194 321 + 729520 ctgggatgatttcctcttgtcCAAGCCTTTTATTctggcaaccaatgaactttacactctttctatagttttgccttttccagaatgtcacatagttggaatcagacagtggatacgccatttgggcgggcttatttcgtgtagtgatatacattgaactctcctccacatcttttcatgacttgagagcttgtgtcttcttagcatgggataatattccattgtctggacacatagttaatccactcacttactgaagggcatcttggttgcttccaagtttgggcgattatgaataaagctactgtaaagatcc-------------atatg s panTro4.chr19 59298640 321 + 63644993 ctgggatgatttcctcttgtcCAAGCCTTTTATTctggcaaccaatgaacttcacactctttctatagttttgcatcttccagaatgtcacatagttggaatcagacagtggatacgccatttgggcgggcttatttcatgtagtgatatacattgaactctcctccacgtcttttcatgacttgagagctcgtatgtccttagcatgggataatattccattgtctcgacacatagttaatccactcacgtactgaagggcatcttggttgcttccaagtttgggcgattatgaaaaaagctactgtaaggatcc-------------atatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56183725 321 + 60714840 ctgggattatttcttctTGTCCAAGCCTTTTATTctggcaaccaatgaacttttccctctttctatagttttgccttttccagaatgtcacatagttggaatcagccagtggttatgccgtttggatgggcttatttcatgtagtgatatacattgaactctcctccacgtcttttcatgacttgagagctcatatcttcttagcacggaataatattccattgtctggacacatagttaatgcactcatgtactgaagggcatcttggttgcttccaagtttgggcaattatgaataaagctaccgtaaagatcc-------------atatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3930510 334 + 106955855 ctgggattatttcctcttgtcCAAGCCTTTTATTctggcaaccaatgagcttttccctctttctatagcttcgccttttccagactgtcacatagttggaatcagacagtggataccccatttgggcgggcttatttcgtgtagtgatatacattgaactctcctccacgtcttttcatgacttgagagctcgtctcttcttagcacgggataatattccattgtcttgacacatagttaatccattcacttactgaagggcatcttggttgcttccaagtttgggcaattatgaataaagctaccgtaaagatccatgtgcgtgttttatgtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60184913 321 + 64156825 ctgggattatttcctcttgtcCAAGCCTTTTATTctggcaaccaatgaacttttcactctttctatagttttaccttttctagagtgtcacatagttggaatcagacagtggatcccctatctgggctgacttctttcatgtaatgatatacatttaactctcttccacgtcttttcatgacttgagagctcatatcttcttcgcacggggtaatattccattgtctggacacacagttaatccactcactcactgcagagcatctcggttgcttccaagtttgggcagttatgaataaagttaccgtaaagatcc-------------atatg i rheMac3.chr19 C 0 I 29 s macFas5.chr19 55285529 321 + 59248254 ctgggattatttcctcttgtcCAAGCCTTTTATTctggcaaccaatgaacttttcactctttctatagttttaccttttctagagtgtcacatagttggaatcagacagtggatcccctatctgggctgacttctttcatgtaatgatatacatttaactctcttccacgtcttttcatgacttgagagctcatatcttcttcgcacggggtaatattccattgtctggacacacagttaatccactcactcactgcagagcatctcggttgcttccaagtttgggcaattatgaataaagttaccgtaaagatcc-------------atatg i macFas5.chr19 C 0 I 13 s papAnu2.chr19 3797878 321 - 51301725 ctggGATTATTTCCTCTTGTCCAAGCCTTTTATTCTGGCAACCAATGAACTTTTCACTCTTTCTATTGTTTTGCCTTctccagaatgtcacatagttgGAATCAGACAGTGAATTCCCTATCTGGGCTGACTTCTTTCATGTAATGATATACATTTAGCTCTCCTCCACGTCTTTTCATGACTTGAGAGCTCATATCTTCTTCGCAcgggataatattccattgtctggacaCACAGTTAATCCACTCACTTACTGCAGGGcatcttgattgcttccaagtttgggcaGTTATGAATACAGCTACCGTAAAGATCC-------------ACATG i papAnu2.chr19 I 816 I 13 s chlSab2.chr6 47081066 318 + 50890351 ctaggatgatttcctcttgtcCAAGCCTTTTATTctggcaaacaatgaacttttcactctttctatagttttgccttttccagaatgtctcatagttggaatcagacagtggatcccctatctgggctgacttctttcatgtaatgatgtacatttagctc---tccacgtcttttcatgacttgagagctcatatcttcttagcatgggataatattccattgtctggacacatagttaatccactcacttactgcagggcatcttggttgcttccaagtttgggcaattatgaataaagttaccgtaaagatcc-------------atatg i chlSab2.chr6 C 0 I 13 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I a score=61937.000000 s hg38.chr19_GL949747v2_alt 353515 39 + 729520 accgtatgttttcagctcccttcggtaaatatcaaggaa s panTro4.chr19 59298961 39 + 63644993 accgtatgttttcagctcccttcggtaaataccaaggaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56184046 39 + 60714840 accatatgttttcagctctcttgggtaaataccaaggaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3930844 39 + 106955855 accatacgttttcagctcccttgagtaaataccaaggaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55285863 39 + 59248254 accgtacgttttcagttccctcgggtaaataccaaggaa i macFas5.chr19 I 13 C 0 s papAnu2.chr19 3798212 39 - 51301725 AACATATGTTTCAAACTTCCTCGGGCAAATACCAAGGAA i papAnu2.chr19 I 13 C 0 s chlSab2.chr6 47081397 39 + 50890351 accatacgttttcagttcccttgggtaaataccaaggaa i chlSab2.chr6 I 13 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e rheMac3.chr19 60185234 29 + 64156825 I a score=207646.000000 s hg38.chr19_GL949747v2_alt 353554 90 + 729520 tgcaattgctggattacatggcaaagctatatttagttttagaagaaattgccgcactgtctcccaaagtggctgtaccatttggcaatc s panTro4.chr19 59299000 90 + 63644993 tgcaattgctggattacatggcaaagctaaatttagtttgagaagaaattgccgcactgtctcccaaagtggctgtaccatttggcaatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56184085 90 + 60714840 tgcaattgctggattacgtggcaaagctatatttagttttagaagaaattgccgcactgtctcccaaagtggctgtaccatttggcaatc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3930883 90 + 106955855 tgcaattgctggattacatggtaaagctatatttagtttcataacacattgccgcactgtctcccaaagtggctgtaccatttcgcaatc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60185263 90 + 64156825 tctaattgctggattctatggtaaggctatatttagttttagaagaaattgccacactgtctcccaaagtggctggaccatttcgcaatc i rheMac3.chr19 I 29 C 0 s macFas5.chr19 55285902 90 + 59248254 tgtaattgctggattatacggtaaggctatatttagttttagaagaaattgccacactgtctcccaaagtggctggaccatttcgcaatc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3798251 90 - 51301725 TGTAATTGCTGGATTACATGGTAAAGCTATATTTAGTTTTAgaagaaattgccacactgtctcccaAAGTGGCTGGACCATTTCGcaatc i papAnu2.chr19 C 0 I 591 s chlSab2.chr6 47081436 90 + 50890351 cgtaattgctggattatatggtaaggctatatttagttttagaagaaattgccacactgtctcccaaagtggctggaccattttgcaatc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I a score=1266160.000000 s hg38.chr19_GL949747v2_alt 353644 610 + 729520 ccaccagcaatgaatgagagttcccgttgctccacatcctcgccagtaggccagtatgtggtattgtctgcgttttagaatttggccactctaataggtgtgtcgtggtaactTGGTTCCTAAGATACTGATAGAGGTGCAGAACACCAGCTGGGAAGTCAGCCAGAATGAGCTTCTCCTGTGACTTCCTGTCCCACAGCCTCAGAGAACTTTGACAAGCCACTTCCCCTATAAACTTGTCtttctttctt-----tcttttt--tttttttttttttgagatgaagtctcactctgtcacccaggctggagtgcaatggcatgatcttggctcactgcaacctccgcctcccgggttcaagtgattct-------------------------------------------------catgcctcagcctcgtgagtaactgggattacaggcatgcaccaccacacccagataattttgtatttttagtacagacggggtttcaccatgctgaccaggctggtctcggactcctgacctc--gtgatctgcccacctcagccttttaaagtgctgggattataggtgtaagccactgagcccggcc----TCCTTATAAACTTCTCTAAATCTAAATTTGTGAATATTCTTTCTTTAAAAGTCGATCAAC s panTro4.chr19 59299090 604 + 63644993 ccaccagcaatgaatgagagttgctgttgctccacaacctggccagtaggccagtatgtggtgttgtctgcgttttagaatttggccactctaataggtgtgccgtggtaactTGGTTCCTAAGATACTGAGAGAGGTACAGAACACCAGCTGGGAAATCAGCCAGAATGAGCTTCTCCTGTGACTTCCTGTCCCACAGCCTCAGAGACCTCGGACAAGCCACTTCCCCTATAAACttatcttttttt-----------tttt--tttttttttttttgagatggtgtctcactctgtcacccaggctggagtgcaatggcatgatcttggctcactgcaacctccgcctcccgggttcaagtgattct-------------------------------------------------catgcctcagcctcgcgagtaactgggattacaggcatgcgccaccacacccagataattttgtatttttagtacagacggggtttcaccatgctgaccaggctggtctcggactcctgacctt--gtgatctgcccacctcagccttttaaagtgctgggattataggtataagccactgagcccggcc----TCCTTATAAACGTCTCTAAATCTAAATTTGTGAATATTCTTTCTTTAAAAGTCGATCAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56184175 617 + 60714840 ccaccagcaatgaatgagagttcctgttgctccacatcctcgccagtatgccagtatgtggtattgtctgcgttttagaatttggccactctaataggtgtgtcgtggtaATTTGGTTCCTAAGATACTGAGAGAGGTGCAGAACACCAGCTGGGAAATCAGCCAGAATGCGCTTCTCCTGTGACTTCCTGTTCCACAGCCTCAGAGACCTCGGACAAGCCACTTCCCCTATAAACTTATCTTTTTTCtttctttcttttttt--tttttttttttttgagatggagtctcgctctgtcacccaggctggagtgcaatggcatgatcttggctcactgcaacctccgcctcctgggttcaagtgattct-------------------------------------------------cctgcctcagcctcgcgagtaactgggattacaggcatgcgccaccacatccagctaattttgtatttttagtacagacggggtttcaccatgctgaccaggctggtctcggactcctgacctc--gtgatctgcccacctcagccttttaaagtactgggattataggtgtgagccaccgagtccggcc--CTTTTTTATAAACTTCTCTAAATCTAAATTTGTGAATATTCTTTCTTTAGAAGTCGATCAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3930973 607 + 106955855 ccagcagcaatgaatgagcgttcctgttgctccacatcctcgccagtaggccagtatgtggtattgtctgtgctttagaatttggccactctgataggtgtgtcgtgg----tTGGTTCCTAAGATACTGAGAGAGTTGTGGAACACCAGCTGGGAAATCAGCCAGAATGAGCTTCTCCTGTGACTTCCTGTCCCACAGCCTCAGAGACCTCAGACAAGCCACTTCCCCTATAAACCTATCtttcctt----------ttttt--tttttttttttttgagatggagtctggctctgtcacccaggctggagtgcaatggcatgatcttggctcactgcaacctctgcctcccaggttcaagtgattcc-------------------------------------------------catgcctcagcctcctgagtagctgggattacaggcacgtgccaccccacccagctaattttgtattttcagtagagacggggtttccccacgtcagccagtatagtctggaatccctgacctcaggtgatccgcccgcctcaacctcccaaagtgctaggatgacaggcgtgagccaccacacttggcTACTTCCCTTATAAACTTTTCTAAATATAAATGTGTGAATATTCTTTCTTCAGAAGCCGAtcaac i nomLeu3.chr10 C 0 I 509 s rheMac3.chr19 60185353 607 + 64156825 ccaccagcaatgaatgagagttcctgttgctccacgtcctctccagtgtgccagtatgtggtatcatctgcatttcagaatttggccactctaataggtgtgtcgtggtaactTGGTTCCTAAGATACTGAGAGAGGTGCAGAACACCAGCTGGGAAGTCAGCCAGAATGAGCTTCTCCTGTGAAGTCCTGTCCCACAGCCTCAGTGTCCTCAGACAAGCCACTTCCCCTTTCCTTCT-TCTTtttttttt-----tttcttttctttttttttttttgagatggaatctcactctgtaacccaggctgaagtgcaatggcatgatctcggctcactgcagcctctgc---------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------acaggcatgcaccaccatgcccggctaattttgtatttttagtagagatgggttttcaccatgttgaccaggctggtcttgaactc--gacctc--atgatttggttgcctcagcctttcaaagtgctgggattacaggtgtgagccaccgagcccggcc----TCCTTATAAACTTCTCTAAATCTAAATTTGTGAATATTCTTTCTTTGAAAGTTGATCAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55285992 607 + 59248254 ccaccagcaatgaatgagagttcctgttgctccacgtcctctccagtatgccagtatgtggtatcatctgcatttcagaatttggccactctaataggtgtgtcgtggtaactTGGTTCCTAAGATACTGAGAGAGGTGCAGAACACCAGCTGGGAAGTCAGCCAGAATGAGCTTCTCCTGTGACGTCCTGTCCCACAGCCTCAGTGTCCTCAGACAAGCCACTTCCCCtttccttct-tctttttttttt-----tttcttt--tttttttttttttgagatggaatctcactctgtaacccaggctgaagtgcaatggcatgatctcggctcactgcagcctctgcctcccaggttcaagtgattct-------------------------------------------------cctgcctcagtcttgcaagtagctgggattacaggcatgcaccaccatgcccggctaattttgtatttttagtagagatgggttttcaccatgttgaccaggctggtcttgaactc--gacctc--atgatttggctgcctcagcctttcaaagtgctgggattacaggtgtgagccaccgagcccggcc----TCCTTATAAACTTCTCTAAATCTAAATTTGTGAATATTCTTTCTTTGAAAGTTGATCAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47383934 606 + 51301725 ccaccagcaatgaatgagagttcctgttgctccacgtcctctccagtaTGCCAGTATGTGGTATCATCTGCGTTTCAGAATTTGGCCACTCTAATAGGTGTGTCGTGGTAACTTGGTTCCTAAGATACTGAGAGAGGTGCAGAACACCAGCTGGGAAGTCAGCCAGAATGAGCTTCTCCTGTGACGTCCTGTCCcacagcctcagtgtcctcagaCAAGCCActtcccctttccttct-tc-ttttttttt-----tttcttt--tttttttttttttgagatggaatctcactctgtaacccaggctgaagtgcaatggcatgatctcggctcactgcagcctctgcctcccaggttcaagtgattct-------------------------------------------------cctgcctcagtcttgcaagtagctgggattacaggcatgcaccaccatgcccggctaattttgtatttttagtagagatgggttttcaccatgttgaccaggctggtcttgaactc--gaccTC--ATGATTTGGCTGCCTCagcttttcaaagtgctgggattacaggtgtgagccaccgagcccggcc----tccTTATAAACTTCTCTAAATCTAAATTTGTGAATATTCTTTCTTTGAAAGTTGAtcaac i papAnu2.chr19 M 1175 C 0 s chlSab2.chr6 47081526 598 + 50890351 ccaccagcaatgaatgagaattcctgttgctccatgtcctctccagtatgccagtatgtggtatcgtctgtgtttcagaatttggccactgtaataggcgtgtcgtggtaactTGGTTCCTAAGATACTGAGAGAGCTGCAGAACACCAGCTGGGAAGTCAGCCAGAATGAGCTTCTCCTGTGACGTCCTGTCCCACAGCCTCAGTGACCTCAGACAAGCCGCTTCCCCTTTTCttct-tcttcttttttt-----ttttttt--tttttt---------gatggagtcttactctgtcacgcaggctgaagtgcaatggcatgatctcggctcactgcagcctctgcctcccaggttcaagtgattct-------------------------------------------------cctgcctcagtcttgcaagtaactaggattacaggcatgcaccaccacgcccggctaattttgtatttttagtagagatgggttttcaccaggttgaccaggctggtctcgaactc--gacctc--atgatttggctgcctcagcctttcaaagtgctgggattacaggtgtgagccactgagcccggcc----TCCTTATAAACTTCTCTAAATCTAAATTTGTGAATATTCTTTCTTTGAAAGTTAATCAAC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I a score=387181.000000 s hg38.chr19_GL949747v2_alt 354254 220 + 729520 Tggcctggcacagtggctcatgcctgtaataccagcattttggaaggtcgaggcggatggatcacttgaggtcaggagttcgagtccagcctggccaacctggtgaaaccccatctctactaaaaatacaaaattagaggggcatagt--ggcgggcgcctgtaatcccagctgcttgggaggctgagaggcaggagaattgcttgaacccaggaggtagag s panTro4.chr19 59299694 220 + 63644993 Tggcctggcacagtggctcacgcctgtaataccagcactttggaaggtcgaggcggatggatcacttgaggtcaggagttcgagtccagcctggccaacctggtgaaaccccatctctactaaaaatacaaaattagaggggcatagt--ggcgggcgcctgtaatcccagctgcttgggaggctgagaggcaggagaattgcttgaacccaggaggtagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56184792 217 + 60714840 Tggcctggcacagtggctcacgcctgtaataccagcattttggaaggccgaggcggatggatcacttgaggtcaggagttcgagtccagcctggccaacatggtaaaaccccatctctactaaaaatacaaaactagaggggcatagt--ggcgggcgcctgtaatccca---gcttgggaggctgagaggcagcagaattgcttgaacccgggaggtagag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60185960 220 + 64156825 Tggccaggcgcagtggctcacgcttgtaataccagcattttggaaggccgaggtggatggatcacttgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaattagaggggcatagt--ggcaggcgcctgtaatcccagctgctccggaggctgagaggcaagagaattgcttgaacctgggaggcagag i rheMac3.chr19 C 0 I 63 s macFas5.chr19 55286599 220 + 59248254 Tggccaggcgcagtggctcacgcttgtaataccagcattttggaaggccgaggtggatggatcacttgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaattagaggggcatagt--ggcaggcgcctgtaatcccagctgctccggaggctgagaggcaagagaattgcttgaacctgggaggcagag i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47384540 222 + 51301725 tggccaggcgcagtggctcacgcttgtaataccagcattttggaaggccgaggtggatggatcacttgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaattagagagGCATAgtggggcaggcgcctgtaatcccagctgctccggaggctgagaggcaagagaattgcttgaacctgggaggcagag i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 47082124 218 + 50890351 TTGTAATACCAAGTA--tcacgcttgtaataccagcattttggaaggccgaggtggatggatcacttgaggtcaggtgttcgagacaagcctggccaacatgatgaaaccccatctctactaaaaatataaaattagaggggcatagt--ggcaggcgcctgtaatcccagctgctcctgaggctgagaggcaggagaattgcttgaacctgggaggcagag i chlSab2.chr6 C 0 I 63 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I a score=7979.000000 s hg38.chr19_GL949747v2_alt 354474 11 + 729520 gttgcagtgag s panTro4.chr19 59299914 11 + 63644993 gttgcagtgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185009 11 + 60714840 gttgcagtgag i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55286823 11 + 59248254 GTGGCACTGAG i macFas5.chr19 I 4 I 24 s papAnu2.chr19 47384766 11 + 51301725 gtGGCACTGAG i papAnu2.chr19 I 4 I 24 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I e chlSab2.chr6 47082342 63 + 50890351 I e rheMac3.chr19 60186180 63 + 64156825 I a score=12447.000000 s hg38.chr19_GL949747v2_alt 354485 48 + 729520 ccgaaatcgcaccactgcactccagcctgggcaacaggagcgaaactc s panTro4.chr19 59299925 48 + 63644993 ccgaaatcgcaccactgcactccagcctgggcaacaggagcgaaactc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185020 48 + 60714840 ctgagatcttgccactgcactccagcctgggcaacaggagcgaaactc i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I e chlSab2.chr6 47082342 63 + 50890351 I e papAnu2.chr19 47384777 24 + 51301725 I e macFas5.chr19 55286834 24 + 59248254 I e rheMac3.chr19 60186180 63 + 64156825 I a score=10207.000000 s hg38.chr19_GL949747v2_alt 354533 36 + 729520 tgtcctaaaaaaacaaaattaaattaaaaaGCCAGT s panTro4.chr19 59299973 36 + 63644993 tgtcctaaaaaaaTTAAATTAAATTAAAAAGCCAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185068 36 + 60714840 tgtcctaaaaaaTTTAAATTAAGTTAAAAAGCCAGT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55286858 24 + 59248254 TGCTCTAAAGAAAA-----------AAATATCCgg- i macFas5.chr19 I 24 C 0 s papAnu2.chr19 47384801 24 + 51301725 tgctctaaagaaaa-----------aaatatccgg- i papAnu2.chr19 I 24 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I e chlSab2.chr6 47082342 63 + 50890351 I e rheMac3.chr19 60186180 63 + 64156825 I a score=120492.000000 s hg38.chr19_GL949747v2_alt 354569 68 + 729520 cctggtgtggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcagatcacgaggtc s panTro4.chr19 59300009 68 + 63644993 cctggtgtggtggctcacacctgtaatcccagcactttgggaggccaaggcaggcagatcacgaggtc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185104 68 + 60714840 ccgggcttggtggctcatgcctgtaatcccagcactttgggaggccaaggcgggcagatcacgaggtc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60186243 68 + 64156825 ctgggtgcagtggctcatgcctataatcccagcactttgggaggccaaggcaggcagatcacaaggtc i rheMac3.chr19 I 63 C 0 s macFas5.chr19 55286882 68 + 59248254 ctgggcgcagtggctcatgcctgtaatcccagcactttgggaggccaaggcaggcagatcacaaggtc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47384825 68 + 51301725 ctgggtgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcaggcagatcacaaggtc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47082405 68 + 50890351 ctgggcgcagtggctcatgcctgtaatcccaacactgtgggaggccaaggcaggcagatcacaaggtc i chlSab2.chr6 I 63 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I a score=165302.000000 s hg38.chr19_GL949747v2_alt 354637 217 + 729520 aggtgatcgagaccatcctggccaacacggtgaaaccccatctctactaaaaaaa---tacaaaaagttagctgggcgtggtggcgggcacctgtagtcccagctacttgggaggctgaggcaggaaaatggcatgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagccagggtgacagagcgagactccgtctcaaaa s panTro4.chr19 59300077 220 + 63644993 aggagatcgagaccatcctggctaacacggtgaaaccccatatctactaaaaaaaaaatacaaaaagttagctgggtgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggaaaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcatgccactgcactccagcctgggtgacagagcgagactccgtctcaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185172 217 + 60714840 aggagatcgagaccatcctggccaacacggtgaaactccgtctctactgaaaaaa---tacaaaaagttagctgggcgtggtggcgggtgcctgtagtcccagctacttgggaggctgaggcagaaaaatggcataaaccctggaggcggagcttgcaatgagccgagatcacgccactgcactctggcctgagtgacagagcgagactccgtctcaaaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60186311 213 + 64156825 aagagatggagaccatcctggccaacatggtgaaaccccgtctctactaaaaa-----tac-aaaagttagctgggcgtggtggcgggcacttgtaatcccagctactcgggaggctgaggcagaagaatcacttgaacctgggaggcggaggttgtagtgagccaagatcacaccactgcaccccagcctggg-gacagagtgagactctgtctcaaaa i rheMac3.chr19 C 0 I 37 s chlSab2.chr6 47082473 212 + 50890351 aagagatggagaccatcctggccaacatggtgaaaccccatctctactaaaaa-----tac-aaaagttagctgggcgtggtggcaggcacctgtaatcccagctactcgggaggctgaggcagaagaatcacttgaacctgggaggcggaggttgtagtgagccgagatcgcaccactgcgctgcagcctggg-gacagagcgagactctgtctcaaa- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I e papAnu2.chr19 47384893 0 + 51301725 C e macFas5.chr19 55286950 0 + 59248254 C a score=8025.000000 s hg38.chr19_GL949747v2_alt 354854 17 + 729520 ataaataaataaataaa s panTro4.chr19 59300297 17 + 63644993 ataaataaataaataaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185389 17 + 60714840 ataaataaataaattaa i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47082685 17 + 50890351 ataaataaaTACATAAA i chlSab2.chr6 C 0 I 7 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I e papAnu2.chr19 47384893 0 + 51301725 C e macFas5.chr19 55286950 0 + 59248254 C e rheMac3.chr19 60186524 37 + 64156825 I a score=2948.000000 s hg38.chr19_GL949747v2_alt 354871 16 + 729520 at-----aaataaGTCGATAG s panTro4.chr19 59300314 16 + 63644993 at-----aaataaGTCGATAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185406 21 + 60714840 ataaataaaATAAGTCGAttg i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I e chlSab2.chr6 47082702 7 + 50890351 I e papAnu2.chr19 47384893 0 + 51301725 C e macFas5.chr19 55286950 0 + 59248254 C e rheMac3.chr19 60186524 37 + 64156825 I a score=77081.000000 s hg38.chr19_GL949747v2_alt 354887 166 + 729520 accaatatttatcaattacctcttatacgcttggtgtttgagattcaggaatgaacaaaacagatccagtccctgccctcaacctagctcttagtgtaatgattatgggaacagggtcaaatagcaaatcacaaATTATTTCACGACTATTGTGAGACAAGAGTGA s panTro4.chr19 59300330 166 + 63644993 accaatatttatcaattacctcttatacacttggtgtttgagattcaggaatgaacaaaacagatccagtccctgccctcgaccgagctcttagtctaatgattatgggaacagggtcaaatagcaaatcacaaattatttcatgaCTATTGTGAGACAAGAGTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185427 166 + 60714840 actaatatttatgaattacctcttatatgcttggtgtttgagattcaggagtgaacaaaacagatccagtccctgccctcaacagacctcttagtctaatgattatgggaacagggtcaaatagcaagtcacaaATTATTTCACGACTATTGTGAGATAAGAGTGA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 3798932 166 - 51301725 ACCAATATTTATCAATTGCTTATTATCTGCTTGATGTTTGAGATTCAGGAGTGAACAAAACATATCCAGCCGCTGCCATCAACAGAGCTCTGAGTCTAATGATGATAGGGACAGGATCAAAGAGCAAATCACAAATTATTTAGCTACTATTGTGAGATAAGAGTTA i papAnu2.chr19 I 591 I 174 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I e chlSab2.chr6 47082702 7 + 50890351 I e macFas5.chr19 55286950 0 + 59248254 C e rheMac3.chr19 60186524 37 + 64156825 I a score=5322.000000 s hg38.chr19_GL949747v2_alt 355053 11 + 729520 Gagccaagagt s panTro4.chr19 59300496 11 + 63644993 Gagccaagagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185593 11 + 60714840 Gagccaagagt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 3799272 11 - 51301725 gagccaggtgt i papAnu2.chr19 I 174 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I e chlSab2.chr6 47082702 7 + 50890351 I e macFas5.chr19 55286950 0 + 59248254 C e rheMac3.chr19 60186524 37 + 64156825 I a score=41907.000000 s hg38.chr19_GL949747v2_alt 355064 65 + 729520 ggtggtgcacacctgtaatcccagct-----------------------------cgaaccagggagacagaggttgcagtgagccgagatcgc s panTro4.chr19 59300507 65 + 63644993 ggtggtgcacgcctgtaatcccagct-----------------------------cgaaccagggagacagaggttgcggtgagccgagatcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185604 65 + 60714840 ggtggtgcatgcctgtaatcccagct-----------------------------cgaaccagggagacagaggttgcggtgagccgagatcgc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3834721 93 - 59248254 ggtggcgggcgcctgcagtcccagctacc-gggaggctgaggcaggagaatggtgtgaacccaggaggcggagtttgcagtgagcccagaccgt i macFas5.chr19 I 8745 C 0 s papAnu2.chr19 3799283 94 - 51301725 ggtggcgggcgcctgtagtcccagctactggggaggctgaggcaggagaatggcgtaaacccgggaggcagaggttgcagtgagctgagatcac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I e chlSab2.chr6 47082702 7 + 50890351 I e rheMac3.chr19 60186524 37 + 64156825 I a score=5470.000000 s hg38.chr19_GL949747v2_alt 355129 5 + 729520 accaa s panTro4.chr19 59300572 5 + 63644993 accaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185669 5 + 60714840 accGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3932089 5 + 106955855 accaa i nomLeu3.chr10 I 509 C 0 s macFas5.chr19 3834814 5 - 59248254 gccac i macFas5.chr19 C 0 I 60 s papAnu2.chr19 3799377 5 - 51301725 gccac i papAnu2.chr19 C 0 I 57 s chlSab2.chr6 3696106 5 - 50890351 ACCGA i chlSab2.chr6 I 1091 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e rheMac3.chr19 60186524 37 + 64156825 I a score=343439.000000 s hg38.chr19_GL949747v2_alt 355134 165 + 729520 tggcttaacacaatgggatttggcttttcactcatgtaaatgaccagtgcggttttctctggggcagaatttgaa-ttttctccccaggatgactcagggacacccgcttcctccattgtgctcccatcatgcccttgggcaatggcgtcccgtactTCAAACAGC s panTro4.chr19 59300577 165 + 63644993 tggcttaacacaatgggatctggcttctcactcatgtaaatgaccagtgcggttttctctggggcagaatttgaa-ttttctccccaggatgactcagggacacccgcttcttccattgggctcccatcatgcccttgggcAATGGCATCCCGTACTTCAAACAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185674 164 + 60714840 tggcttaacacaatgggatttggcttctcactcatgtaaatgaccagtgcgggtttctct-gggcagaatttgaa-ttttctccccaggatgactcaaggacacccgcttcttccattgtgctcacatcatgcccttgggcaatggcgtcccatactTCAAACAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3932094 165 + 106955855 tgccttaacacaatgaggtttggcatctcactcatgtaaatgaccagtgagggtttctct-gggcagaatttgagtttttttccccaggatgactcagggacaccggcttcttccattgtgctcacatcatccccttgggcaatggtgtcccatacttcagacaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3848452 158 - 64156825 tggcttaacataatgaggtttgtcatctcactcacgtaaatgaccaatgagggtttctct-gggcggaatttgaa-ttttatctccaggatgactcagggacacccgcttcttcca------tcatatcatccccttgggcaatggcgtcccatccttcacacaga i rheMac3.chr19 I 5929 C 0 s macFas5.chr19 3834879 158 - 59248254 tggcttaacataatgaggtttgtcatctcactcacgtaaatgaccaatgagggtttctct-gggcggaatttgaa-ttttatctccaggatgactcagggacacccgcttcttcca------tcatatcatccccttgggcaatggcgtccCATCCTTCACACAGA i macFas5.chr19 I 60 C 0 s papAnu2.chr19 3799439 158 - 51301725 tGGCTTAACACAATGAGGTTTGGCATCTCACTCATGTGAATGACCAGTAAGGGTTTCTCT-GGGCggaatttgaa-ttttatctccAGGATGACTCAGGGACACCCGCTTCTTCCA------TCATATCATCCCCTCGGGCAATGGCGTCCCATCCTTcacacaga i papAnu2.chr19 I 57 C 0 s chlSab2.chr6 3696111 157 - 50890351 tggcttaacacaatgaggtttggcatctcactcatgtgaatgaccaatgagggtttctct-gggcggaatttgaa-ttttatctccaggatgactcagggacacccgcttcttcca------tcatatcatcccctcgggcaatggcgtccCATCCTTCACACAG- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I a score=488204.000000 s hg38.chr19_GL949747v2_alt 355299 208 + 729520 AAGAAAGAAGGAGAAACAGAATATATCTGTGCACTTGCAAAATTTGCTGACACATGTCATTTCTGTCCAGAATTGTTGGCTATAAATAGT-------GTTATGAACAGTCACACAATGATGCAAC-AAGACCAGGGAAAAAGTCCCTTGGTG-GGGGTAGCCACTTCCCAGAGGTTCCAATGCTTGCACTGTAAGGGTAAGTACAGAA-----TTTTTTTTT s panTro4.chr19 59300742 208 + 63644993 AAGAAAGAAGGAGAAACAGAATATATCTGTGCACTTGCAAAATTTGCTGACACATGTCATTTCTGTCCAGAATTGTTGGCTATAAATAGT-------GTTATGAACAGTCACACAATGATGCAAC-AAGACTAGGGAAAAAGTCCCTTGGTG-GGGGTAGCCACCTCCCAGAGTTTCCAATGCTTGCACTGTAAGGGGAAGTACAGAA-----TTTTTTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185838 212 + 60714840 AAGAAAGAAGGAGAAACAGAATATATCTGTGCACTTGCAAAATTTACTGACACATGTCATTTCTGTCCAGAATTGTTGGCTATAAATAGT-------ATTATGGACAGTGACACATGGATGCAAC-GAGACCAGGAAAAAAGTCCCTTGGTG-GGGGTAGCCACCTCCCAGAGGTTCCAGTGCTTGTACTGTAATGGGAAGTACAGAA-TTTTTTTTTTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3932259 201 + 106955855 aag-----aggagacacagaaaatatttgtaaatttgcaaaattgactgacgcacatcatttctgtccag-atttttggctataagtagt------cattatggtcagtcacacatgggtgcaaaggagactagaaaaAAAGTCCCTTGGTG-AGGGTAGCCACCTCCCAGAGGTTCCAGTGCTTGCACTGTAA-GGGAAGTACAGAA-------TTCTTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3848610 206 - 64156825 aag-----aggagacacagaaaatatttgtacacttgcaacgttgattgacgcacatcatttctgtccag-acttttggctataaatagt------cattatggtcagtcacacacggatgcaaaggagactaggagaAAAGTCCCTTGGTG-GGGGTAGCCACCTCCCAGAGGTTCCAATGCACGCAGTGTAAGGGGAAGTACAGAA---TTTTTTTGTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3835037 206 - 59248254 AAG-----AGGAGACACAGAAAATATTTGTACACTTGCAACGTTGATTGACGCACATCATTTCTGTCCAG-ACTTTTGGCTATAAATAGT------CATTATGGTCAGTCACACACGGATGCAAAGGAGACTAGGAGAAAAGTCCCTTGGTG-GGGGTAGCCACCTCCCAGAGGTTCCAATGCACGCACTGTAAGGGGAAGTACAGAA---TTTTTTTGTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3799597 206 - 51301725 aag-----agaagaaacagaaaatatttgtacACTTGCAACGTTGATTGACGCACATCATTTCTGTCCAG-ACTTTTGGCTATAAATAGT------CA-TATGGTCAGTCACACACGGATGTAAAGGAGACTAGGAGAAAAGTCCCTTGGTG-GGGGTAGCCACCTCCCAGAGGTTCCAATGCATGCACTGTAAGGGGaagtacagaa--tttttttttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3696268 202 - 50890351 -----------AGACACAGAAAATATTTGTACACTTGCAACGTTGATTGACGCACATCATTTCTGTCCAG-ACTTTTGGCTATAAATAGT------CATTATGGTCAGTCACACAC-GATGCAAAGGAGACTAGGAGAAAAGTCCCTTGGTG-GGGGTAGCCACCTCCCAGAGGTTCCAATGCATGCACTGTAAGGGGAAGTACAGAAtttttttttttttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45602008 210 + 49145316 AAGAAAG-AGGAGAAACAGAAAATATTTGTGCACTTGCAAAATGTACTTAGACATATCATTTCCGTCCAG-ATCTTCGGCTAAAAATAGTCATTATCATTACAATCAGCCACACATGGATGCAAAGGAGACTAGAAAAAATGTCCCTTGGTGTGGGGTAGCCACCTCCCAGAGATTCGAGTGC----AGTGTAAGGGGAAATACAGAA------TGCTTTTT i calJac3.chr22 I 694 C 0 e canFam3.chr1 19770093 10665 - 122678785 I a score=1172334.000000 s hg38.chr19_GL949747v2_alt 355507 406 + 729520 TTTCTGGTGAGCAGCCACATATTTCTGCCTCACGTGAAAAATAATCTCAAGAAGAAATGTACCTGAGAATGTATAGCCCAGGAGCATGATGTTGTGACACCT-GAT-TGATGGACCATGTG------------------------------------------------------------------------------------GGGTGATTGACTCCCCTGTACTTAGAAGGAAATCA--AAACCAAAGGTTCAAGTAATATTAAAGAGAAATATTGTCATATTCCCTCTGGAACCCATGCACGTCTTAGCTAACCTGCAGAGAGGAGTAGAAACC-ACTAGAACTGAAGGAGG-CAGCTCTGTGCAAGGGTGACGGCCTTCTCCCCTCCCAGTTCCCTTAGTTCTGGAGTTCGA---TGAAGGACGGGGTCCACACGGCCCACTCCGTTTCCTCTTTCTCTGAACCGGGGGTGCAGAACCTGAACCCAGACAACCC s panTro4.chr19 59300950 406 + 63644993 TTTCTGGTGAGCAGCCACATATTTCTGCCTCACGTGAAAAATAATCTCAAGAAGAAATGTACCTGAGAATGTATAGCCCAGGAGCATGATGTTGTGACACCT-GAT-TGATGGACCATGTG------------------------------------------------------------------------------------GGGTGATTGACTCCCCTGTACTTAGAAGGAAATCA--AAACCAAAGGTTCAAGTAATATTAAAAAGAAAAACTGTCATATTCCCTCTGGAACCCATGCACGTCTTAGCTAACCTGCAGGGAGGAGTAGAAACC-ACTAGAACTGAAGGAGG-CAGCTCTGTGCAAGGGTGACGGCCTTCTCCCCTCCCAGTTCCCTTAGTTCTGGAGTTCGA---TGAAGGACGGGGTCCACACGGCCCACTCCGTTTCCTCTTTCTCTGAACCGGGGGTGCAGAACCTGAACCCAGACAACCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56186050 406 + 60714840 TTTCTGGTGATCAGCCACACATCTCTGCCTCATGTGAAAAATAATCTCAAGAAGAAATGTACCTGAGAATGTATAGCCAAGGAGCATGATGTTGTGACACCC-GAT-TGATGGACCATGTG------------------------------------------------------------------------------------GGGTGATTGACTCCCCTGCACTTAGAAGGAAATCA--AAACCAAAGGTTCAAGTAATATTAAAGAGAAAAATTGTCATATTCCCTCTGGAACCCATGCACACCTTAGCTAACCTGCATGGAGTTGTAGAAACC-ACTAGAACTGAGGGAGG-CAGCTCTGTGCCAGGGTGATGGCCTTCTCCCCTCCCAGTTCCCTTAGTTCTGGAGTTCAA---TGAAGGACGGGGTCCACACGGCCCACTCCGTTTCCTCTTTCTCTGAACCAGGGGTGCAGAACCTGAACCCAGACAACCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3932460 406 + 106955855 TTTCTGGTGAGCAGCCACACATCTCTGCCTCATGTGAAAAATAATCTCAAGAAGAAATGTACCTGAGAGTGTATAGCCAACGAGCACGATGTCGTGACACCC-GAT-TGATGGACCATGTT------------------------------------------------------------------------------------GGGTGATTGACTCTCCTGATCTTAGAAGGAAATCA--AAACCAAAGTTTCAAGTAACATCAAAGAGAAACATCTCCATGTTCCTTCTGGAACCCGTGCATGTCTTAGCTAAACTGCAGGGAGAAGTAGAAACT-ACTAGAACTGAGGGAGG-CAGCTGCGTGCAAGGGTGATGGGCTTCTCCCCTCCCAGTTCCCTTAGTTCTGGAGTTCGA---TGAAGGACGGAGTGCACATGGCCCACTCCATTTCCTCTTTCTCTGAACCGGTGGTGCAGAACCTGAACCCAGACAACCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3848816 407 - 64156825 TTTCTGGTGAGCAGCCACATATCTCTGCCTCATGTGAAAAATAATCTCCAGAAGAAACATACCTGAGACTGTACAGCCAAGGAGCATGACGTTGTGACACCCTGAT-TGATGGGCCATGTG------------------------------------------------------------------------------------GGGTGACTGACTCCTCTGTACTTAGAAGGAAACCA--AAACCAAAGTTTCAAGTAATATTAAAGAGAAAAATTGTCATATTCCCTCTGGAACCCATGCACATCTTAACTTACCTGCAGAGAGCTGTAGAAACC-ACTAGAACCGAGGGAAG-CAGCTCTGTGCAAGGATGGTGGTCTTCTCCCCTCCCAGTTACCTTCGTTCTGGAGTTCGA---TGAAGGACGGGGTCCACACGGCCCACTCCGTTTCCTCTTTCTCTGAACCGGGGATGCAGAACCTCAACCCGGGTAACCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3835243 407 - 59248254 TTTCTGGTGAGCAGCCACATATCTCTGCCTCATGTGAAAAATAATCTCCAGAAGAAACATACCTGAGACTGTACAGCCAAGGAGCATGACGTTGTGACACCCTGAT-TGATGGGCCATGTG------------------------------------------------------------------------------------GGGTGACTGACTCCTCTGTACTTAGAAGGAAATCA--AAACCAAAGTTTCAAGTAATATTAAAGAGAAAAATTGTCATATTCCCTCTGGAACCCATGCACATCTTAACTTACCTGCAGAGAGCTGTAGAAACC-ACTAGAACCGAAGGAAG-CAGCTCTGTGCAAGGATGGTGGTCTTCTCCCCTCCCAGTTACCTTCGTTCTGGAGTTCGA---TGAAGGACGGGGTCCACACGGCCCACTCCGTTTCCTCTTTCTCTGAACCGGGGATGCAGAACCTCAACCCGGGTAACCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3799803 407 - 51301725 tttctggtgagcAGCCACATATCTCTGCCTCATGTGAAAAATAATCTCAAGAAGAAACGAACCTGAGACTGTACAGCCAAGGAGCACGATGCTGTGACACCCTGAT-TGATGGGCCATGTG------------------------------------------------------------------------------------GGGTGACTGACTCCTCTGTACTTAGAaggaaatca--aaaccaaagtttcaagtaatattaaagataaaaattatcatATTCCCTCTGGAACCCATGCACATCTTAACTTACCTGCAGAGAGCTGTAGAAACC-ACTAGAACCGAGGGAAG-CAGCTCTGTGCAAGGGTGGTGGCCTTCTCCCCTCCCAGTTACCTTCGTTCTGGAGTTCGA---TGAAGGACGGGGTCCACACGGCCCACTCCGTTTCCTCTTTCTCTGAACCAGGGATGCAGAACCTGAACCCGGGTAACCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3696470 404 - 50890351 tttCTGGTGAGCAGTCACATATCTCTGCCTTATGTGAAAAATAATCTCAAGAAGAAACGAACCTGAGACTGTACATCCAAGGAGCGCGACGCTGTGACACCCTGAT-TGATGGGCCATGTG------------------------------------------------------------------------------------GGGTGATTGACTCCTCTGTACTTAGAAGGAAATC-----ACCAAAGTTTCAAGTAATATTAAAGATAAAAATTATCATATTCCCTCTGGAACCCATGCACATCTTAGCTAACCTGCAGAGAGCTGTAGAAACC-ACTAGAACCAAACGAAG-CAGCTCTGTGCAAGGGTGGTGGCCTTCTCCCCTCCCAGTTACCTTCGTTCTGGAGTTCGA---TGAAGGACGGGGTCCACACGGCCCACTCGGTTTCCTCTTTCTCTGAACCGGGGATGCAGAACCTGAACCCGGGTAACCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45602218 484 + 49145316 TTTCTGGTGAGCAGCCACACA--TCTGCCTTGTGTGAAAAATAATCCCAAGAAGAAATGTACCTGAGAACGTCTAGCCAAGGAGCACGATGTTGTAACACCCTGAC-TGATGAACCATCTGGTGCGACTGACAGACCATCTGGAGTGATTGACAGAACATCTGGGGTGGTTGACAGAACATCTGGGGTGGTTGACAGAACATCTAGGGTGATTGATTCCTCTGTACTTAGAGGGACACCA--AAACCAACATTTCAAGTATTATTAAC-AGAAAAATTGTCGTCTTCCCTCTGGAGCTCATGCAAGTCTTAGTTAACCTGAAGCGAGCTGTAGAAGCC-ACTAGAACCGACGGAGG-CCGCTGTGTGC-ACACTGGTGGCCTTCTCCCCTCCCAGCTC---TACTTCTAGAGTTCAG---TGAAGGAAGGGGTCTACATGGCCCACTAAGTTTCCTCTTTCTCTAAACTGGGGGTGCAGGATCTGAACCTGGGCAACTC i calJac3.chr22 C 0 T 37439 s canFam3.chr1 19780758 378 - 122678785 TTCCCAGTGAGCAAACAGACACCTCCACCTCATGTGGGAAGTAA-----AGAAGAAA--TACATGAGTCTGTATAGCAACGGAGTGTACTATTATAACCCCTCCATCCTATGCACCATCTG------------------------------------------------------------------------------------GGCTGACTGACTCTTCAAGACATAAGAGGAACTGGACAAATGGGTGTTCCGAGTAACATCACAGAGACA----------------CGAAAAATAACATGCATCTTGGTTAACTTGAAGAGACTTGTCACAACCAAATAGAAGAGAGAGAGATTAGTCATGTG----AGTGGGGGTCAGTTCCC------ATTCTCTGGGTTCTTGACTTTGGGCTTGAAGGAC----TCCATGGGGCCCATTCATTTTCCTTTTGGTCTGAACACAAGGAACAAGACCCAAGATTAGGCAACAT i canFam3.chr1 I 10665 C 0 a score=147523.000000 s hg38.chr19_GL949747v2_alt 355913 54 + 729520 CTGGGTATGAGTCCGGCCCCAGATCA-CAGCTGTGGT--------------TTTGGCTGCCGCAGTGAC s panTro4.chr19 59301356 54 + 63644993 CTGGGTATGAGTCCGGCCCCAGATCA-CAGCTGTGGT--------------TTTGGCTGCCGCGGTGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56186456 55 + 60714840 CTGGGTCTGAGTCTGGCCCCAGAGCACCAGCTGTGGT--------------TTTGGCTGCCACGGTGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3932866 54 + 106955855 CTGGGTATGAGTCCAGCCCCAGATCA-CAGCTGTGGT--------------TTTGGCTGCCGCGGTGAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849223 55 - 64156825 CTGGGTATGAGTCCAGCCCCAGATCACCAGCTGTGGT--------------TTTGGCTGCCGCAGTGAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3835650 55 - 59248254 CTGGGTATGAGTCCAGCCCCAGATCACCAGCTGTGGT--------------TTTGGCTGCCGCAGTGAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800210 55 - 51301725 CTGGGTATGAGTCCAGCCCCAGATCACCAGCTGTGGT--------------TTTGGCTGCTGCGGTGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3696874 55 - 50890351 CTGGGTATGAGTCCAGCCCCAGATCACCAGCTGTGGT--------------TTTGGCTGCCGTGGTGAC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19781136 69 - 122678785 CTGGGTATCTGTCCCACCAGAAATCACCAGCTGTGATCACATGACACTGTGCTAGGCTGCCACAGTGAC i canFam3.chr1 C 0 T 47437 e calJac3.chr22 45602702 37439 + 49145316 T a score=45397.000000 s hg38.chr19_GL949747v2_alt 355967 21 + 729520 CTTGGCAAAGTCCTGAGTCGT s panTro4.chr19 59301410 21 + 63644993 TGTGGCAAAGTCCTGAGTCGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56186511 21 + 60714840 CGTGGCAAAGTCCTGAGTCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3932920 21 + 106955855 CGTGGCAAAGTCCTGAGACGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849278 21 - 64156825 CGTGGCAACGTCCTGAGTCGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3835705 21 - 59248254 CGTGGCAACGTCCTGAGTCGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800265 21 - 51301725 CGTGGCAACGTCCAGAGTCGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3696929 21 - 50890351 CGTGGCAACATCCTGAGTCAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19781205 47437 - 122678785 T e calJac3.chr22 45602702 37439 + 49145316 T a score=513042.000000 s hg38.chr19_GL949747v2_alt 355988 209 + 729520 TTGCTGTTGTGGGTATGATGGACAGCTGCGACGTTTTCCTGGACTCCCACTGAA------ATCTTTAACTTCAAGATCAT-------CTTCTCCATCCCAACAGAACTCATCA-GGCCCAGAAGGCTCCC--AGC--------------------------------------------------CCCAGAGGTTCCCAGAGCTCTTCAGGTGGAATGTTGAGTCTGCACAAGCCAGGATGGTGACTCTGGAGAAGTTCTCCAGAAAAGAATCAG s panTro4.chr19 59301431 209 + 63644993 TTGCTGTTGTGGGTATGATGGACAGCTGCGACGTTTTCCTGGACTCCCACTGAA------ATCTTTAACTTCAAGATCAT-------CTTCTCCATCCCAACAGAATTCCTCA-GGCCCGGAAGGCTCCC--AGC--------------------------------------------------CCCAGAGGTTCCCAGAGCTCTTCAGGTGGAATGTTGAGTCTGCACAAGCCAGGATGGTGACTCTGGAGAAGTTCTCCAGAAAAGAATCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56186532 215 + 60714840 TTGCTGTTGTGGGTATGATGGACAGCTGCAACGTTTTCCTGGACTCCCATTGAAATCTTTATCTTTAACTTCAAGATCGT-------CTTCTCCATCCCAAGAGAACTCATCA-GGCCCAGAAGGCTCCT--AGC--------------------------------------------------CCCAGAAGTTCCCAGAGCTCTTCAGGTGGAATGTTGAGTCTGGACAAGCCAGGATGGTGACTCTGGAGAAGTTCTCCAGAAGAGAATCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3932941 216 + 106955855 TTGCTGTTGTGGGTATGATGGACAGCCTGGACGTTTTCCTGGACTCCCACTGAAATCTTTATCTTTAACTTCAAGATCGT-------CTTCTCCATCCCAACAGAACTCATCAGGGCCCAGAAGGCTCCC--AGC--------------------------------------------------CCCAGAGGTCCCCAGAGCTCTTCAGGTGGAATGTTGAGTCTGGACCAGCCAGGATGGTGACTCTGGAGAAGTTCTCCAGAAAAGAATCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849299 212 - 64156825 TTGCTGTTGTGGGTATGACGGACAGCTGGGACATTTTCCTGGACTCCCACCGAAATCTTTATCTTTAACGTCAAGATCGT-------CTTCTCCATCCCAACGGGACTCATCA-GACCCAGAAGGCTCCC--AGC--------------------------------------------------CCCAGAGGTTCCCAGAGCTCTTCACGTGGAATGTTGAGTCTGGACCAGCCAGGATGGTGACTCTGG---AGTTCTCCAGAAAAGAATCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3835726 212 - 59248254 TTGCTGTTGTGGGTATGACGGACAGCTGGGACATTTTCCTGGACTCCCACCGAAATCTTTATCTTTAACGTCAAGATCGT-------CTTCTCCATCCCAACGGGACTCATCA-GACCCAGAAGGCTCCC--AGC--------------------------------------------------CCCAGAGGTTCCCAGAGCTCTTCACGTGGAATGTTGAGTCTGGACCAGCCAGGATGGTGACTCTGG---AGTTCTCCAGAAAAGAATCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800286 265 - 51301725 TTGCTGTTGTGGGTATGATGGACAGCTGGGACATTTTCCTGGACTCCCACCAAAATCTTTACCTTTAACGTCAAGATCGT-------CTTCTCCATCCCAACGGGACTCATCA-GACCCAGAAGGCtccc--agccccagaggttcccagaggttcccagacattcccagaggttcccagaggttcccagaggttcccagagCTCTTCACGTGGAATGTTGAGTCTGGACCAGCCAGGATGGTGACTCCGGAGAAGTTCTCCAGAAAAGAATCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3696950 215 - 50890351 TTGCTGTTGTGGGTATGATGGACAGCTGGGACATTTTCCTGGACTCCCACTGAAATCTTTACCTTTAACGTCAAGATCGT-------CTTCTCCATCCCAATGGGACTCATCA-GACCCAGAAGTCTCCC--AGC--------------------------------------------------CCCAGAGGTTCCCAGAGCTCTTCACGTGGAATGTTGAGTCTGGACCAGCCAGGATGGTGACTCTGGAGAAGTTCTCCAGAAAAGAATCAG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19733768 216 - 122678785 TTGCTGTCATGTACATGATGGAGAACTTGGCC-TTGTCCTTGGGTTCCAGTGCAGGCTGTCTCTC-----CCAAGGCCATAACTTTCCCTCTTTATGCAGGAGGTACTCCT---GGGCCTTCAGGCTCCCCTGAC--------------------------------------------------ACCAGATGGTCACAGGTGTCCCCCAGGGGATCACAGAACCTGGCTCAGTCCAGATGGTGGGTTTGGGGAGGATCCCTGGAAGGAAACAAG i canFam3.chr1 T 47437 I 156 e calJac3.chr22 45602702 37439 + 49145316 T a score=194324.000000 s hg38.chr19_GL949747v2_alt 356197 106 + 729520 CATCTAGAGTCTCCTGAGTTCCAGGCCCTTAGAAATTTAGACTCCAGAACCACTGCCAAAGTGACCCCCTCAGCCCAGCCCTTCG------------------------------------GTACCCAGCATCCACTGTCCT s panTro4.chr19 59301640 106 + 63644993 CATCTAGAGTCTCATGAGTTCCAGGCCCTTAGAAATTTAGACTCCAGAACCACTGCCAAAGTGACCCCCTCAGCCCAGCCCTTTG------------------------------------GTACCCAGCATCCACTGTCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56186747 142 + 60714840 CATCTAGAGTCTCATGAGTTTGAGGCCCTTAGAAATTTAGACTCCAGAACCACTGCCAAAGTAACCCCCTCAGCCCAGCCCTTCGGTACCCAGCACCCACTGTCCTGAGCCCAGCCCTTCCGTACCCAGCATCCACTGTCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3933157 94 + 106955855 CACCTAGAGTCTCATGAGTTCCAGGCCCTTGGAAATTTAGACTCCAGAACCACTGCCAAAGTAACCCTCTCAGCGCAGCCCTTCA------------------------------------GTACCCAGC------------ i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849511 85 - 64156825 CATCTAGAGTCTCATGAGTTCCAGGCCCTGAGAAATTTAGACTCCAGAACCACTGCCAAAGTAACCCCCTCAGCCCAGTTCTTCG--------------------------------------------------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3835938 85 - 59248254 CATCTGGAGTCTCATGAGTTCCAGGCCCTGAGAAATTTAGACTCCAGAACCACTGCCAAAGTAACCCCCTCAGCCCAGTTCTTCG--------------------------------------------------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800551 85 - 51301725 CATCTAGAGTCTCATGAGTTCCAGGCCCTGAGAAATTTAGACTCCAGAACCACTGCCAAAGTAACCCTCTCAGCCCAGTTCTTCG--------------------------------------------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3697165 106 - 50890351 CATCTAGAGTCTCATGAGTTCCAGGCCCTTAGAAATTTAGACTCCAGAACCACTGCCAAAGTAACCCTCTCAGCCCAGTTCTTCG------------------------------------GTACCCGGTATCCACTCTCCT i chlSab2.chr6 C 0 I 338 e canFam3.chr1 19733984 156 - 122678785 I e calJac3.chr22 45602702 37439 + 49145316 T a score=3942.000000 s hg38.chr19_GL949747v2_alt 356303 15 + 729520 CAGCCCAGCCCTTCC s panTro4.chr19 59301746 15 + 63644993 GAGCCCAGCCCTTCC i panTro4.chr19 C 0 I 252 s ponAbe2.chr19 56186889 15 + 60714840 CAGCCCAGCCCTTCC i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19733984 156 - 122678785 I e calJac3.chr22 45602702 37439 + 49145316 T e nomLeu3.chr10 3933251 0 + 106955855 C e chlSab2.chr6 3697271 338 - 50890351 I e papAnu2.chr19 3800636 0 - 51301725 C e macFas5.chr19 3836023 0 - 59248254 C e rheMac3.chr19 3849596 0 - 64156825 C a score=32551.000000 s hg38.chr19_GL949747v2_alt 356318 22 + 729520 GTACCCAGCATCCACTGTCCTG s panTro4.chr19 59302013 22 + 63644993 GTACCCAGCATCCACTGTCCTG i panTro4.chr19 I 252 C 0 s ponAbe2.chr19 56186904 22 + 60714840 GTACCCAGCATCCACTGTCCTG i ponAbe2.chr19 C 0 I 1458 s nomLeu3.chr10 3933251 13 + 106955855 ---------ATCCACTGTCCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849596 22 - 64156825 GTACCCGGCATCCACTCTCCTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3836023 22 - 59248254 GTACCCGGCATCCACTCTCCTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800636 22 - 51301725 GTACCCGGCATCCACTCTCCTG i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19733984 156 - 122678785 I e calJac3.chr22 45602702 37439 + 49145316 T e chlSab2.chr6 3697271 338 - 50890351 I a score=34524.000000 s hg38.chr19_GL949747v2_alt 356340 26 + 729520 GTGGGAGTCCGCTGTGCTGCTCCAAG s panTro4.chr19 59302035 26 + 63644993 GTGGGAGTCCGCTGTGCTGCTCCAAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3933264 26 + 106955855 GTGGGAGTCCGTTGTGTTGCTCCAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849618 26 - 64156825 GTGGGAGTCCATTGTGTTGCTCCAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3836045 26 - 59248254 GTGGGAGTCCATTGTGTTGCTCCAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800658 26 - 51301725 GTGGGAGTCCGTTGTGTTGCTCCAAG i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19733984 156 - 122678785 I e ponAbe2.chr19 56186926 1458 + 60714840 I e calJac3.chr22 45602702 37439 + 49145316 T e chlSab2.chr6 3697271 338 - 50890351 I a score=39934.000000 s hg38.chr19_GL949747v2_alt 356366 22 + 729520 AAGACAGACCCTCACCATTACC s panTro4.chr19 59302061 22 + 63644993 AAGACAGACCCTCACCATTACC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3933290 22 + 106955855 AAGACAGACCGTCACCATTACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849644 22 - 64156825 AAGACAGACCCTCACCATTACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3836071 22 - 59248254 AAGACAGATCCTCACCATTACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800684 22 - 51301725 AAGACAGATCCTCACCGTTACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3697609 22 - 50890351 aaGACAGACCCTCACCATTACT i chlSab2.chr6 I 338 C 0 e canFam3.chr1 19733984 156 - 122678785 I e ponAbe2.chr19 56186926 1458 + 60714840 I e calJac3.chr22 45602702 37439 + 49145316 T a score=172604.000000 s hg38.chr19_GL949747v2_alt 356388 62 + 729520 GGAAAGACTGACCCTCCTGTGTCCAGGTCCTGTGGCCCAGACTCAGCTCTGGAAGAGAAATC s panTro4.chr19 59302083 62 + 63644993 GGAGAGACTGACCCTCCTGTGTCCAGGTCCTGTGGCCCAGACTCAGCTCTGGAAGAGAAATC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3933312 62 + 106955855 GGAGAGACTGACCCTCCTGTGTTCAGGTCCTGTGGCCCAGACTCAGCTCTGGAAGAGAAATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849666 62 - 64156825 GGAGAGACTGACCCTCCTGAATTCAGGTCCTGTGGCCCAGACTCAGCTCTGGAAGAGAAATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3836093 62 - 59248254 GGAGAGACTGACCCTCCTGAATTCAGGTCCTGTGGCCCAGACTCAGCTCTGGAAGAGAAATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800706 62 - 51301725 GGAGAGACTGACCCTCCTGAATTCAGGTCCTGTGGCCCAGACTCAGCTCTGGAAGAGAAATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3697631 62 - 50890351 GGAGAGACTGACCCTCCTGTGTTCAGGTCCTGTGGCCCAGACTCAGCTCTGGAAGGGAAATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45565263 62 + 49145316 GGACAGACTGACCTGCCTGCACATGGGTCCTGGGGCCCAAACTCAGCCCTGGAAGAGAGTTC i calJac3.chr22 T 37439 I 37956 s canFam3.chr1 19734140 62 - 122678785 GGACAGACTCACCTGCTTGTACTCGGGTCCTGGAGCTCACACTCAGCCCTGGAAGAGAGGTT i canFam3.chr1 I 156 C 0 e ponAbe2.chr19 56186926 1458 + 60714840 I a score=5348.000000 s hg38.chr19_GL949747v2_alt 356450 2 + 729520 TG s panTro4.chr19 59302145 2 + 63644993 TG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3933374 2 + 106955855 TG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849728 2 - 64156825 TG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3836155 2 - 59248254 TG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800768 2 - 51301725 TG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3697693 2 - 50890351 TG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19734202 2 - 122678785 TG i canFam3.chr1 C 0 I 47045 e ponAbe2.chr19 56186926 1458 + 60714840 I e calJac3.chr22 45565325 37956 + 49145316 I a score=574348.000000 s hg38.chr19_GL949747v2_alt 356452 315 + 729520 GATTTACAATGCTCAGTACGTCGCTCAAAATCTGCACTCGATGACGTCTGTAAGCTCTTGGTCCCAGCCTGGGCTGCGAAGCCTGAGGCTTGGGCAGACAATGCCGTCCCGCCGTCATCTCTGCTCCCTCTTCGATCGCTAAGCTCCCACAGCATTGATCTAACCAGACATGGGCCCAGGGAGAGAGCTGTCTTCCCCACCTCCCAGCCCCAATCCCTCAATCCCTCGCCTGCCGTGCCAAGACTGGTCAAGGGAAAGTCCAGGAAGAAAGCATGGTAAGGGGCACCGTGCTGCCTGCGCCCGCCCCGCTGTGCA s panTro4.chr19 59302147 315 + 63644993 GATTTACAATGCTCAGTACTTCGCTCAAAATCTGCACTCGATGACGTCTGCAAGCTCTTGGTCCCAGCCTGGACTGCGAAGCCTGAGGCTTGGGCAGATAATGCCTTCCTGCCGTCATCTCTGCTCCCTCTTCGATCGCTAAGCTCCCACAGCATTGATCTAACCAGACATGGGCCCAGGGAGAGAGCTGTCTTCCCCGCCTCCCAGCCCCAATCCCTCAATCCCTCGCCTGCCATGCCAAGACTGGTCAAGGGAAAGTCCAGGAAGAAAGCATGGTAAGGGGCACCGTGCTGCCTGCGCCGGCCCCGCTGTGCA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3933376 315 + 106955855 GATTTAAAATGCTCAGCACTTCACTCAGAATCTGCACTCGATGACGTCTGTAAGCTCTTAGTCCCAGCCTGGGCTGCGAAGCCTGAGGCTTGAGCAGATAATGCCTTCCTGCCATCGTCTCTGCTCCCTCTTCAATCGCTAAGCTCCCACAGCATTGATCTAACCAGACAGGGGCCCAGGGAGAGAGCTGTCTTCCCCGCCTCCCAGCCCCGATCCCTCCATCCCTCGCCTGCCATGCCAAGACTGGTCAAGGGAAAGTCCAGGAAGAAAGCGTGGGAAGGGGCACCGTGCTGCCTGCGCCGGCCCCGCTGTGCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849730 315 - 64156825 GATTTAAAATGCTCAGTGCTTCGCTCGAAATCTGCACTTGATGAAGTCTGTAAGCTCTTGGTCCCAGCCTGGGCTGCGAAGCCTGAGGCTTGGGCAGATAATGCCTTCCCGCCATCATGTCTGCTCCCTCTTCAATCACTAAATCCCCACAGCATTGATCTAACCAGACATGGGCCCAGGGAGAGAGCTGTCTTCCCCGCCTCCCAGCCCCAATCCCTCGATCCCTCACCTGCCACGCCAAGACTGGTCAAGGGAAAGTCCAGGAAGAAACCATGGTAAGCGGCACTGTGCTGCCTGCACCCGCCCCGCTGTGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3836157 315 - 59248254 GATTTAAAATGCTCAGTACTTCGCTCGAAATCTGCACTTGATGAAGTCTGTAAGCTCTTGGTCCCAGCCTGGGCTGCGAAGCCTGAGGCTTGGGCAGATAATGCCTTCCCGCCATCATGTCTGCTCCCTCTTCAATCACTAAACCCCCACAGCATTGATCTAACCAGACATGGGCCCAGGGAGAGAGCTGTCTTCCCCGCCTCCCAGCCCCAATCCCTCGATCCCTCACCTGCCACGCCAAGACTGGTCAAGGGAAAGTCCAGGAAGAAACCATGGTAAGCGGCACTGTGCTGCCTGCACCCGCCCCGCTGTGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800770 315 - 51301725 GATTTAAAATGCTCAGTACTTCGCTCGAAATCTGCACTTGATGAAGTCTGTAAGCTCTTGGTCCCAGCCTGGGCTGCGAAGCCTGAGGCTTGGGCAGATAATGCCTTCCTGCCATCATCTCTGCTCCCTCTTCAATCACTAAATCCCCACAGCATTGATCTAACCAGACCTGGGCCCAGGGAGAGAGCTGTCTTCCCCGCCTCCCAGCCCCGATCCCTCGATCCCTCACCTGCCACGCCAAGACTGGTCAAGGGAAAGTCCAGGAAGAAACCATGGTAAGCGGCGCTGTGCTGCCTGCACCGGCCCCACTGTGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3697695 315 - 50890351 GATTTAAAATGCTCAGTACTTTGCTCAAAATCTGCACTTGATGAAGTCTATAAGCTCTTGGTCCCAGCCTGGGCTGCGAAGCCTGAGGCTTGGGCAGATAATGCCTTCCCGCCATCATGTCTGCTCCCTTTTCCATCACTAAACCCCCACAGCATTGATCCAACCAGACATGGGCCCAGGGAGAGAGCTGTCTTCCCCACCTCCCAGCCCCGATCCCTCGATCCCTCGCCTGCCATGCCAAGACTGATCAAGGGAAAGTCCAGGAAGAAACCATGGTAAGGGGCACTGTGCTGCCTGCGCCGGCCCCACTGTGCA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19734204 47045 - 122678785 I e ponAbe2.chr19 56186926 1458 + 60714840 I e calJac3.chr22 45565325 37956 + 49145316 I a score=947721.000000 s hg38.chr19_GL949747v2_alt 356767 488 + 729520 GAATGCAGAGGCTCAGGATGCGGTGCGCAGAGACTCAGTCCCAACCGTCTTGTGG-CTTCTTACCACGTATCTCCCAGGAAGTCA--CCATGAGGCTTAGTTCTTCCTTCCTGTGACTGG-GGTAAAGGAGAGAACTGTCTCCTTGGACATCAT------------CATCCATACGCCCGGCCCGAACGTCATCTCTGACCCAAACACCAAATCCAGACGGGCAACCACGGCTGTGGGGTGTGGAGGGGGAATCTGAACACCAACCTGGAGGTCAGACTTGAAGGAGACGGCGACGCTGCCTTCGCCCCATTCACAATATACAACCTTCGAT-GGGCCACCTCCCCAGTGAGGCTTCATCAAGGGGGCTTGGTCAACTTCCTTTTTG--TGTGAACGAAAACATACGTTTCCAGGCGCCTATTAA-GGGCTTGAGTCTGTGTCAGAGAC--GAGCCACACAAGTCAACGGACCTCACAGTCTAATGTGGAGGGCACACCTC-------------TGACTATTC s panTro4.chr19 59302462 488 + 63644993 GACGGCAGAGGCTCGGGATGCGGTGCGCAGAGACTCAGTCCCGACCGTCTTGTGG-CTTCTTACCACGTATCTCCCAGGAAGGCA--CCATGAGGCTTAGTTCTTCCTTCCCGTGACTGG-GGTAAAGGAGAGAACTGTCTCCTTGGACATCAT------------CATCCTTACGCCCGGCCCAAACGTCATCTCTGACCCAAACACCAAATCCAGACGGGCAACCACGGCTGTGGGGTGTGGAGGGGGAATCTGAACACCAACCTGGAGGTCAGACTTGAAGGAGACGGCGACGCTGCCTTCGCCCCATTCACAGTATACGACCTTCGAT-GGGCCACCTCCCCAGTGAGGCTTCATCCAGGGGGCTTGGTCAACTTCCTTTTTG--TGTGAACGAAAACATACATTTCCAGGCGCCTATTAA-GGGCTTGAGTCTGTGTCAGAGAC--GAGCCACACAAGTCAACGGACCTCACAGTCTAATGTGGAGGGCACACCTC-------------TGACTATTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3933691 488 + 106955855 GACAGCAGATGCTCGGGATGCGGTGCTCAGAGACTCAGTCCCGACCGTCTTGTGG-CTTCTTACCAAGTATCTCCCAGGAAGGCA--CCATGAGGCTTAGTTCTTCCTTCCCGTGACTGG-GGTAAAGGGGAGAACTGTCTCCTTGGACATCAT------------CATCCATATGCCCAGCCCGAACGTGATCTCTGACCCAAACACCAAATCCAGACGGGCAACCATGGCTATGGGGTGTGGAGGGGGAATCTGAACACCAACCTGGAGGTCAGACTTGAAGGAGACGGCGACGCTGCCTTCGCCCCATCCAGAATATACAGCCTTCGAT-GGGCCACCTCCCCAGTGAGGCTTCATCAAGGGGGCTTGGTCAACTTCCTTTTTG--TGTGAACGAAAACATACATTTCCAGGCACCTATTAA-GGGCTTGAGTCTGTGTCAGAGAC--AAGCCACACAAGTCAACGGACCTCACAGTCTAACATGGAGGGCACACCTC-------------TGACTATTC i nomLeu3.chr10 C 0 I 305 s rheMac3.chr19 3850045 487 - 64156825 GACGGCAGATGCTCGGGATGCGGTGCTCAGAGACTCGGTCCCGACCGTCTTGTGG-TTTCTTATCAAGTATCTCCCAGCAAGGCA--CCATGAGGCTTCGTTCTTCCTTCCCGTGACCGG-GGTAAAGGAGAGAACTGTCTCTTTAGACATCAT------------CATCCATATGCCCGGCCCGAACGTCATCTGTGACCCAAACACCAAATCCAGACGGGCAACCATGACTGTGGGGTGTGGA-GGGGAATCTGAACACCAACCCGGAGGTCAGACTTGAAGAAGACGGCGACACTGCCTACACCCCATCCAGAATATACAACCTTCAGT-GGACCACCTCCCCAGTGAGCCTTCATCCATCAGGCTTGGTCAACGTTCTTTTTG--TGTGAATCAAAACATACATATCCAGGCACCTATTAA-GGGCTTGAGTCTGTGTCAGAGAC--GAGCCACACAAGTCcacggacctcacagtctaatgtggaggacacacatc-------------tgagtattc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3836472 488 - 59248254 GACGGCAGATGCTCGGGATGCGGTGCTCAGAGACTCGGTCCCGACCGTCTTGTGG-TTTCTTATCAAGTATCTCCCAGCAAGGCA--CCATGAGGCTTCGTTCTTCCTTCCCGTGACCGG-GGTAAAGGAGAGAACTGTCTCTTTAGACATCAT------------CATCCATATGCCCGGCCCGAACGTCATCTCTGACCCAAACACCAAATCCAGACGGGCAACCATGACTGTGGGGTGTGGAGGGGGAATCTGAACACCAACCCGGAGGTCAGACTTGAAGGAGACGGTGACGCTGCCTACACCCCATCCAGAATATACAACCTTCAGT-GGACCACCTCCCCAGTGAGCCTTCATCCATCAGGCCTGGTCAACGTTCTTTTTG--TGTGAATCAAAACATACATATCCAGGCACCTATTAA-GGGCTTGAGTCTGTGTCAGAGAC--GAGCCACACAAGTCcacggacctcacagtctaatgtggaggacacacatc-------------tgagtattc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3801085 489 - 51301725 AACGGCAGATGCTCGGGATGCGGTGCTCAGAGACTCGgtccccactgtcttctgg-tttCTTATCAAGTATCTCCCAGGAAGGCA--CCATGAGGCTTCGTTCTTCCTTCCCGTGACTGG-GGTAAAGGAGAGAACTGTCTCTTTAGACATCAT------------CATCCATATGCCCGGCCCGAACGTCATCTCTGACCCAAACACCAAATCCAGACGGGCAACCATGACTGTGGGGTGTGGAGGGGGAATCTGAACACCAACCTGGAGGTCAGACTTGAAGGAGACGGCGACGCTGCCTACACCCCATCCAGAATATACAACCTTCAGTGGGGCCACCTCCCCAGTAAGCCTTCATCCATCAGGCTTGGTCAACGTTCTTTTTG--TGTGAATCAAAGCATACATATCCAGGCACCTATTAA-GGGCTTGAGTCTGTGTCAGAGAC--GAGCCACGCAAGTCCACGGACTTCACAGTCTAATGTGGAGGACACACATC-------------TGAGTATTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3698010 488 - 50890351 GACAGCAGATGCTCGGGATGCAGTGCTCAGAGACTCGGTCCCGACTGTCTTGTGG-TTTCTCACCACGTATCTCCCAGGAAGGCA--CCATGAGGCTTCGTTCTTCCTTCCCGTGACTGG-GGTAAAGGAGAGAACTGTCTCTTTAGACATCAT------------CATCCATATGCCCGGCCCGAACGTCATCTCTGACCCAAACACCAAATCCAGACGGACAACCATGGCTCTGGGGTGTGGAGGGGGAATCTGAACACCAACCTGGAGGTCAGACTTGAAGGAGAGGGTGATGCTGCCTATGCCCCATCCAGAATACACAACCTTCAGT-GGGCCACCTCCCCAGTGAGCCTTCATCAATGAGGCTTGGTCAACGTTCTTTCTG--TGTGAATCAAAACATACATATCCAGGCACCTATTAA-GGGTTTGAGTCCATGTCAGAGAC--GAGCCACACAAGTCcacggacctcacagtctaatgtggaggacacacatc-------------tgagtattc i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19781249 501 - 122678785 GAAGACAGATGGACAGAGTGTGGGAGTCAAAGACTCAGTCCCAATCATCTTGTGGTTTTCTTACCAAGGGTCCTACAGAAAGGTCATCCACAAGACCTAGTCCCTCCTTCCTTTGACTGGAAGGATGGGACAGAACTGCTCCATCCCACCCCCTGACTTTCTTTTCCACACTCACGCCCTCCTTGAACATTATTTCAGTCTGAAACGTGAAGTCCAGATTGGCAACCCTGGCTCTGGGGTGTGGAGAGGGATTCCGAGCACTGACTCAAGTGTTAGATGTAAG--------------------TGTCTCACAAAGAATGCAGTACCTCAAGC-CAGTTATCTCCCCAAGGAATTTTAATAAATGTGATTTGGTGAGTTTTCTTTTTTCCCCCCAACTaatacatatttat-tgggtacctcgtaaggggcctgtgcctgtcccaaatgcttgagatacacaaattaatggagctcatggtctaatgaggaagacaCCTATCGAACTGACCTATTGAACTATTC i canFam3.chr1 I 47045 C 0 e ponAbe2.chr19 56186926 1458 + 60714840 I e calJac3.chr22 45565325 37956 + 49145316 I a score=7644.000000 s hg38.chr19_GL949747v2_alt 357255 3 + 729520 AAA s panTro4.chr19 59302950 3 + 63644993 AAA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3934484 3 + 106955855 aaa i nomLeu3.chr10 I 305 C 0 s rheMac3.chr19 3850532 3 - 64156825 aaA i rheMac3.chr19 C 0 n 0 s macFas5.chr19 3836960 3 - 59248254 aaA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3801574 3 - 51301725 AAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3698498 3 - 50890351 aaA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19781750 3 - 122678785 AAA i canFam3.chr1 C 0 I 18 e ponAbe2.chr19 56186926 1458 + 60714840 I e calJac3.chr22 45565325 37956 + 49145316 I a score=9683.000000 s hg38.chr19_GL949747v2_alt 357258 9 + 729520 AGTCATATA s panTro4.chr19 59302953 9 + 63644993 TGTCATATA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3934487 9 + 106955855 aGTCCTATA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3836963 9 - 59248254 CGTCTTATA i macFas5.chr19 C 0 I 3121 s papAnu2.chr19 3801577 9 - 51301725 CGTcttata i papAnu2.chr19 C 0 I 1300 s chlSab2.chr6 3698501 9 - 50890351 TGTCGTATA i chlSab2.chr6 C 0 n 0 s canFam3.chr1 19781771 9 - 122678785 GGTTATATG i canFam3.chr1 I 18 C 0 e ponAbe2.chr19 56186926 1458 + 60714840 I e calJac3.chr22 45565325 37956 + 49145316 I e rheMac3.chr19 3850535 0 - 64156825 I a score=6019.000000 s hg38.chr19_GL949747v2_alt 357267 22 + 729520 --TAGCATATTAACCGTAGATTTt s panTro4.chr19 59302962 22 + 63644993 --AAGCACATTAACCGTAGATTTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3934496 22 + 106955855 --AAGCATATTAATGGTAGATTTT i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19781780 24 - 122678785 TAACCTACAGTAACCTTAGttttt i canFam3.chr1 C 0 I 186 e ponAbe2.chr19 56186926 1458 + 60714840 I e calJac3.chr22 45565325 37956 + 49145316 I e chlSab2.chr6 3698510 0 - 50890351 I e papAnu2.chr19 3801586 1300 - 51301725 I e macFas5.chr19 3836972 3121 - 59248254 I e rheMac3.chr19 3850535 0 - 64156825 I a score=84867.000000 s hg38.chr19_GL949747v2_alt 357289 258 + 729520 aacaaattagcctt-gaaatacctgcagtttgtcacaatggaaggctcacttctcactgggtgacacgtccatatgggggcccccggttggcagttggagctcctccatcaggtgactcaggtgccca-gattcttccaactttggggtccaacctcccctagaaccttggagtgctcTGTTACCAGTGAGGGGAAAGAGGAAGAGAGAGTGGAAAGGGCTCATCCGTGCCTTTTAAATA----AAAAATCTGAATGTgaccag s panTro4.chr19 59302984 258 + 63644993 aacaaattagcctc-gaaatatctgcagtttgtcacaatggaaggctcacttctcactgggtgacacgtccatatgggggcccccggttggcagttggagctcctccatcaggtgactcaggtgccta-gattcttccaactttggggtccaacctcccctagaacctcggagtgctctgttaccagtgaggggaaagaggaagagagagtggaAAGGGCTCATCCATGCCTTTTAAACA----AAAAATCTGAATGTGACGAg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3934518 245 + 106955855 AACGAATTAGCCTG-GAAATACCTGCAGTTTGTCACAATGGAATGGTCACTTCTCACTGGGTGACACTTCCATAT-GGGGTCCCAGGTTGGCAGTTGGAGCTCCTCCACTGGGTGACTCAGGTGCCCA-GATTCTTCCAACTTTGGGGTCCAACCTCCCCTAGAACCTTGGAGTGTTCTGTTACCAGCGAGGGGAAAGA------------GGAAAGGGCTCATCCGTGCCTTTTAAATA----AAAACTCTGAATGTCGCTTG i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19781990 231 - 122678785 AATAAATCAACCTCAAAAATATCAGTAGTTCATGGCAATGGAATGTTTATTGCTC------TGTCAGG----TATGGGTGTCCCAGATTGACACTTGGAGCTCCTCCATGGGGCGACTCATGCTCCCAGGATTCTTCTATATTTTGGCTCCAACACCTCCCAAGACCTTGGAGTACTCTGTCACCAGAAAGGAGAGAGA----------GTAAAAATGGTACATCCAT---TTCAAAACAAAACAAAActctga---------- i canFam3.chr1 I 186 C 0 e ponAbe2.chr19 56186926 1458 + 60714840 I e calJac3.chr22 45565325 37956 + 49145316 I e chlSab2.chr6 3698510 0 - 50890351 I e papAnu2.chr19 3801586 1300 - 51301725 I e macFas5.chr19 3836972 3121 - 59248254 I e rheMac3.chr19 3850535 0 - 64156825 I a score=5034.000000 s hg38.chr19_GL949747v2_alt 357547 14 + 729520 gcgcagtggctcac s panTro4.chr19 59303242 14 + 63644993 gcatggtggctcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56188384 14 + 60714840 gtgcggtggctcac i ponAbe2.chr19 I 1458 C 0 s nomLeu3.chr10 3934763 14 + 106955855 TCACTGCTGCTCAC i nomLeu3.chr10 C 0 I 5581 s canFam3.chr1 19782221 10 - 122678785 ----agtgacacat i canFam3.chr1 C 0 C 0 e calJac3.chr22 45565325 37956 + 49145316 I e chlSab2.chr6 3698510 0 - 50890351 I e papAnu2.chr19 3801586 1300 - 51301725 I e macFas5.chr19 3836972 3121 - 59248254 I e rheMac3.chr19 3850535 0 - 64156825 I a score=414.000000 s hg38.chr19_GL949747v2_alt 357561 2 + 729520 gc s panTro4.chr19 59303256 2 + 63644993 gc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56188398 2 + 60714840 gc i ponAbe2.chr19 C 0 C 0 s canFam3.chr1 19782231 2 - 122678785 at i canFam3.chr1 C 0 C 0 e calJac3.chr22 45565325 37956 + 49145316 I e nomLeu3.chr10 3934777 5581 + 106955855 I e chlSab2.chr6 3698510 0 - 50890351 I e papAnu2.chr19 3801586 1300 - 51301725 I e macFas5.chr19 3836972 3121 - 59248254 I e rheMac3.chr19 3850535 0 - 64156825 I a score=9834.000000 s hg38.chr19_GL949747v2_alt 357563 17 + 729520 ctgtaatcccagcactt s panTro4.chr19 59303258 17 + 63644993 ctgtaatcccagcactt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56188400 17 + 60714840 ctgtaatcccagcactt i ponAbe2.chr19 C 0 I 505 s nomLeu3.chr10 102922007 17 - 106955855 ctgtaatcccagcactt i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19782233 17 - 122678785 ctcttctgctcacattc i canFam3.chr1 C 0 C 0 e calJac3.chr22 45565325 37956 + 49145316 I e chlSab2.chr6 3698510 0 - 50890351 I e papAnu2.chr19 3801586 1300 - 51301725 I e macFas5.chr19 3836972 3121 - 59248254 I e rheMac3.chr19 3850535 0 - 64156825 I a score=107353.000000 s hg38.chr19_GL949747v2_alt 357580 344 + 729520 ----tgggaggccaaggcaggcagatcacaaggtcaagagatggagaccagccgggtgcggtggctcacgcctgtaatcccagcactttgggaggccaagacaggtagatcacaaggtcaggagatcgagactatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaaaattagccgggcatggtggcgggcacctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacctgggaggcggagcttgcagtgagccaagatcgtgccactgcactccagcctggacgacagagcgagactccatctc-------aaaaaaaaaaaaaaaaa s panTro4.chr19 59303275 263 + 63644993 ----tgggaggccaa------------------------------------------------------------------------------------gacaggtagatcacaaggtcaggagatcgagactatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaaaattagccgggcatggtggtgggcacctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccaagattgcgccactgcactccagcctgggcgacagagcgagactccgtctc----aaaaaaaaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56188922 342 + 60714840 ----tgggaggccaaggcaggcagatcagaaggtcaagagatggagaccagccgggcgtggtggctcacgcctgtaatcccagcactttgggaggccaagacaggtagatcacaaggtcaggagattgagaccatcctggctaacatggtgaaaccccgtctctactaaaaatacaaaacaattagccaggcatggtggcgggtgcctgtagtcccagctacttgggaggctaaggcaggagaatggtgtgaacccaggaggtggagcttgcagtgagccaagattgcgccattgcactccagcctaggcaacagagcaagactctgtctc---------aaaaaaaaaaaaaaa i ponAbe2.chr19 I 505 C 0 s nomLeu3.chr10 102922024 346 - 106955855 ----tgggaggccaaggcaggcagatcacaaggtcaagagatggagaccggccaggcgcggtggctcatgcctgtaatcccagcaccttgggaggccgagacgggcgggtcacgaggtcaggagatagagaccatcctggctaacacagtgaaaccccatctctact-aaaatacaaaaaaattagccgggcatggtggccggcgcctgtagtcccaactactcaggaggctgaggcagaagaatggcgtgaacccgggaggc-aagcttgcagtgagcc-agattgtgccactgc-ctgta-cctgggcgacagagcgagactccgtTCTCaaaaaaaaaaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19782250 112 - 122678785 caaaggtgaggccaa---------gtcacaagtccac------------------------------------------------------------------GGTGGGT------GCCATGAGGCAGG------------TAACACTGT-----------------------------------GCCCAGTAGGGCGGCTGTCTCTGGT------------------------------------------------------------------------GATCATGCCA-TGCTATCCA---------------AGAGAAGCCAT--------------------------- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45565325 37956 + 49145316 I e chlSab2.chr6 3698510 0 - 50890351 I e papAnu2.chr19 3801586 1300 - 51301725 I e macFas5.chr19 3836972 3121 - 59248254 I e rheMac3.chr19 3850535 0 - 64156825 I a score=247964.000000 s hg38.chr19_GL949747v2_alt 357924 178 + 729520 aagaggtggagaccatcctggccaacatggtgaaaccccgtctctgctaaaaatacaaaactaagctgggtg-tggtggtgcacacctgtagtcccagctacttggaaggctgaggcatgagaatcacttgaacctgggagacagaggttgtagtgagccgagatcgagccactgcacc s panTro4.chr19 59303538 176 + 63644993 aagagatggagaccatcctggccaacatggtgaaaccccatctctcctaaaaatacaaaacttagctgggtg-tggtggtgcacacctgtagtctcagctactcggaaggctgaggcatgagaatcacttgaacctgggagacaga--ttgtactgagccaagatcgagccactgcacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56189264 178 + 60714840 aagagatggagaccatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaagttagctgggtg-tggtggcgcacacctgtagtcccagctactcgggaggctgagacaggagaatcacttgaacctgggagacagaggttgcagtgagccgagatcgagccactgcacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102922370 175 - 106955855 aagagatggagaccatcctggccaacatggtgaaaccccgtctctgttaaaaatacaaaagttagctgggtg-tggtggcgcaca-ctgtagtcccagctactcgga--gctgaggcaagagaatcacttgaacctgggagacagaggttgtagtgagccaagatcgagccactgcacc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55286950 178 + 59248254 aagagatggagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaagttagctgggcg-tggtggcgggcacttgtaatcccagctactcgggaggctgaggcagatgaatcacttgaacctgggaggcggaggttgtagtgagccaagatcacaccactgcacc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47384893 177 + 51301725 aagagatggagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaagttagctgggcg-tggtggcgggcacttgtaatcccagctactcgggaggctgaggcagaagaatcacttgaacctgggaggcggaggttgtagtgagccaagatcacaccactgca-c i papAnu2.chr19 C 0 C 0 s calJac3.chr22 3406350 175 - 49145316 aggagttcgagaccagcctggccgacatggag-aaccttgtgtctactaaaaatacaaaa---agctgaccattggtatcaggcacctgcaatcacagctatttgggaggctgaggcaggagaatcgcttgaacccaggaggcaggggtggcagtgagccaagattgtgccactgcact i calJac3.chr22 I 35 I 2397 s canFam3.chr1 19782362 93 - 122678785 -----------GACATTCTGGTGCTCAGTAAGCCACCCCTGCTCATGGAAGAA--------------GGGCA--------------CTAAA--------------GAAAGCAGTGGC----------CTTGAGCTTGGGTGAAAAGGG--------------GACTTGAC--------- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 3698510 0 - 50890351 I e rheMac3.chr19 3850535 0 - 64156825 I a score=49359.000000 s hg38.chr19_GL949747v2_alt 358102 44 + 729520 ccagcctggg-gacagagcaagactccgtctc-------------agaaaaaaaaaaa s panTro4.chr19 59303714 45 + 63644993 ccagcctggg-gacagaacgagactccgtctc------------aaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56189442 40 + 60714840 ccagcctggg-tacagagcgagactccgtctc-----------------aaaaaaaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102922545 57 - 106955855 ccagtctggg-ggcagagcgagattccgtctcaaaaaaaaaaaaaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55287128 45 + 59248254 ccagcctggg-gacagagtgagactctgtctc------------aaaataaataaaCA i macFas5.chr19 C 0 I 13 s papAnu2.chr19 47385070 45 + 51301725 ccagcctggg-gacagagtgagactctgtctc------------aaaataaataaata i papAnu2.chr19 C 0 I 13 s calJac3.chr22 45603281 46 + 49145316 CCAGACTGGGCTACAGAGTGAGACCCCATCTC------------taaataaataaata i calJac3.chr22 I 37956 I 12 s canFam3.chr1 19782455 37 - 122678785 CTTGTGTGTG-GATATAATAACACT--GTTTC------------GGCAGGAG------ i canFam3.chr1 C 0 C 0 e chlSab2.chr6 3698510 0 - 50890351 I e rheMac3.chr19 3850535 0 - 64156825 I a score=8162.000000 s hg38.chr19_GL949747v2_alt 358146 7 + 729520 aaTCCTA s panTro4.chr19 59303759 7 + 63644993 aatcCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56189482 7 + 60714840 aaTCCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102922602 7 - 106955855 aaTCCTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55287186 7 + 59248254 AATAGGA i macFas5.chr19 I 13 I 7 s papAnu2.chr19 47385128 7 + 51301725 aatccTA i papAnu2.chr19 I 13 C 0 s chlSab2.chr6 47082709 7 + 50890351 AATCCTA i chlSab2.chr6 I 7 C 0 s calJac3.chr22 45603339 3 + 49145316 aat---- i calJac3.chr22 I 12 C 0 e canFam3.chr1 19782492 0 - 122678785 C e rheMac3.chr19 3850535 0 - 64156825 I a score=112509.000000 s hg38.chr19_GL949747v2_alt 358153 47 + 729520 CGACCTTGTGTGAAAAGGGGACTCAACCCTCAGAGCTAACTCCAGGG s panTro4.chr19 59303766 47 + 63644993 TGACCTTGTGTGAAAAGGGGACTCAACCCTCAGAGCTGACTCCAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56189489 47 + 60714840 CGACCTTGTGTGAAAAGGAGACTCAACCCTCAGAGCTAACTCCAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102922609 47 - 106955855 CGATCTTGTGTGAAAAGGGGACTCAACCCTCAGAGCTGACTCCAGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60186561 47 + 64156825 CGACCTTGTGTGAAAAGGGGACTCGACCCTGAGAGCTGACCCCAGGG i rheMac3.chr19 I 37 C 0 s macFas5.chr19 55287200 47 + 59248254 CGACCTTGTGTGAAAAGGGGACTCGACCCTGAGAGCTGACCCCAGGG i macFas5.chr19 I 7 C 0 s papAnu2.chr19 47385135 47 + 51301725 CGACCTTGTGTGAAAAGGGGACTCGACCCTGAGAGCTGACCCCAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47082716 47 + 50890351 CGACCTTGTGTGAAAAGGGGACTCGACCCTGAGAGCTGACCCCAGGA i chlSab2.chr6 C 0 I 46 s calJac3.chr22 45603342 32 + 49145316 -------------aaatGGGCATTGACCCTGAGAGCCGGC-CCAGG- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19782492 29 - 122678785 ------TGCATGGACCGA----TAAACTCCTGG--------CCTGGG i canFam3.chr1 C 0 C 0 a score=27088.000000 s hg38.chr19_GL949747v2_alt 358200 29 + 729520 AAGCCACCT-GCAGTGTGGAGTGGAATT-GG s panTro4.chr19 59303813 29 + 63644993 AAGCCACCT-GCAGTGTGGAGTGGAACT-GG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56189536 29 + 60714840 AAGCCACCT--CACTGTGGAGTGGAATCAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102922656 29 - 106955855 AAGCCACCT-ACAGGGTGGAGTGGAATC-AG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60186608 29 + 64156825 TAGCCACCT-GTGCTGCGTAGTGTAATC-AG i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55287247 29 + 59248254 TAGCCACCT-GTGCTGCGTAGTGTAATC-GG i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47385182 29 + 51301725 TAGCCACCT-GCTCTGCGTAGTGTAATC-GG i papAnu2.chr19 C 0 I 1 s calJac3.chr22 45603374 30 + 49145316 AAGCCACTGAGCACTGCCAGGTGTAGTC-AG i calJac3.chr22 C 0 I 8 s canFam3.chr1 19782521 14 - 122678785 ------------AAAGCAGAGTGGAG----- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47082763 46 + 50890351 I a score=237929.000000 s hg38.chr19_GL949747v2_alt 358229 106 + 729520 GGCTGAGGACTGACGAGCTGGCGACAGGAAGAGCA---------GCT-GGGGGAGACGTGGACGGAGGAGACAGCTTCTGTGAAAGCCCTAATCAGGAGACAA-TTTTTCC----------TGTTGT--- s panTro4.chr19 59303842 106 + 63644993 GGCTGAGGACTGACGAGCTGGCGACAGGAAGAGCA---------GCT-GGGGGAGACGTGGACGGAGGAGACAGCTTCTGTGAAAGCCCCAATCAGGAGACAA-TTTTTCC----------TGCTGT--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56189565 106 + 60714840 GGCTGAGGACTGACGAGCTGGCGACAGGAAGAGCA---------GCT-GGGGGAGACGTGGATGGAGGAGACAGCTTCTGTGAAAGCCCCAATCAGGAGACAA-TTTTTCC----------TGTTGT--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102922685 106 - 106955855 GGCTGAGGACTGACGAGCTGGCGACAGGAAGAGCA---------GCT-GGGGGAGACGTGGACGGAGGAGACAGCTTCTGTGAAAGCCCCCATCAGGAGATAA-TTTTTCC----------TGTTGT--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60186638 95 + 64156825 GGCTGAGGACTGAC------------TGAAGAGCA---------GCTGGGGGGAGACGTGGACGGAGGAGACAGCTTTGGTGAAAGTCCCCATCAGCAGATAA-TTTTTCT----------TGTCGT--- i rheMac3.chr19 I 1 I 1 s macFas5.chr19 55287277 95 + 59248254 GGCTGAGGACTGAC------------TGAAGAGCA---------GCTGGGGGGAGACGTGGACGGAGGAGACAGCTTTGGTGAAAGTCCCCATCAGCAGATAA-TTTTTCT----------TGTCAT--- i macFas5.chr19 I 1 I 1 s papAnu2.chr19 47385212 94 + 51301725 GGCTGAGGACTGAC------------TGAAAAGCA---------GCTGGGGGGAGACTTGGACGGAGGAGACAGCTTCGGTGAAAGTCCCCATCAGCAG-TAA-TTTTTCC----------TGTTGT--- i papAnu2.chr19 I 1 T 7979 s chlSab2.chr6 47082809 96 + 50890351 GGCTGAGGACTGAC------------TGAAGAGCA---------GCTGGGGGGAGACGTGGACGGAGGAGACAGCTTCTGTTAAAGTCCCCATCAGCAGGTAATTTTTTCC----------TGTTGT--- i chlSab2.chr6 I 46 I 1 s calJac3.chr22 45603412 113 + 49145316 GGCTGAGGGCTGAGGAGCCGGCGACAGGAAATGCAGCATGGGGGGCT-GCGGGAGACGTGGACGGAAGAGAAAGTCTCTGTGAAA-CCCCAGTCAGGAGGTAA--TTTGCC----------TGTTGT--- i calJac3.chr22 I 8 C 0 s canFam3.chr1 19782535 81 - 122678785 GGCTA---------------------GGAAGAG-----------TCT-GGG-----------CAGAGGGGAAAGCTTCTGTGGGAG----AGTCAGGAAACAA-CTTTGCCAGCTCAGACAAGTTGTAGC i canFam3.chr1 C 0 C 0 a score=1048618.000000 s hg38.chr19_GL949747v2_alt 358335 378 + 729520 AAGTTGAGTGGACTCC-AGATGG-AAAAATAATAC-GAAGAATATGTGTACTGATTGAGCAGGAGTCTCTAAAaggccaaataaagttttggtattttaccctc-aagagagtgggacaggttttgagcataagtatggcatcatcatatttttgtctaaaatgtatcTGTAAGACCACTTCCTGAAGTCAGAATTGCACGAAGCAAAAACAGTAagaggtaacg-ttttctgagcatttactttatgccagacactgccctgagtccccagtatggatagtttacttaattttcccaacaactttggaaaggtgttttcatcactagactcattttaatgatgagaacactga-actcagag-g-ttaattagtttgattagtgt s panTro4.chr19 59303948 378 + 63644993 AAGTTGAGTGGACTCC-AGATGG-AAAAATAATAA-TAAGAATATGTGTACTGATTGAGCAGGCGTCTCTAAAaggccaaataaagttttggtattttaccctc-aagagagtgggacaggttttgagcataagtatggcatcatcatatttttgtctaaaatgtatctgtaagactgctCCCTGAAGTCAGAATTGCACGAAGCAAAAACagtaagaagtaacg-ttttctgaacatttactttatgccagacactgccctgagtccccagtatggatagtttacttaattttcccaacaactttggaaaggtgttttcatcactagactcattttaaagatgagaacactga-actcagag-g-ttaattagtttgattagtgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56189671 379 + 60714840 AAGTTAAGTGGACTCC-AGATGG-AAAAATAATAAGGAAGAATATGTGTATTGATTGAGCAGGAGTCTCTAAAaggccaaataaagttttggtattttaccctc-aagagagtgggacaggttttgagcataagtgtggcatcatcatatttttgtctaaaatgtatcTGTAAGACCGCCTCCTGAAGTCAGAATTTCACGAAGTAAAAACAGTAagaggtaacg-ttttctgagcatttactgtatgccagacactgccctgagtcccctgtatggatagtttgtttaattttcccaacaactttggaaaggtgttttcatcactagactcattttacagaggagaacactga-actcagag-g-ttaattagtttgattagtgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102922791 379 - 106955855 AAGTTGAGTGGACTCC-AGATGG-AAAAATAATAAGGAAGAATATGTGTATTGATTGAGCAGGAGTCTCTAAAAGGCCAAATAAAGTTTTGGTATTTTACCCTC-AAGAGAGTGGGACAGGTTCTGAGCATATGTGTGGCATCCTCATATTTTTGTCTAAAATGTATCTGTAAGACCACTTCCTGAAGTCAGAATTGCACGAAGCAAAAAAagtaagaggtaacg-ttttctgagcatttactttataccagacactgccctgagtcccctgtatggatagtttacttaattttcccaacaactttggaaagctgttttcatcactagactcattttacagatgagaacactga-actcagag-g-ttaattagtttgattagtgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60186734 365 + 64156825 AAGTTGAGTGGATTCC-AGATGG-AAAAATGATAAGGAAGAGTATGTGTATTGATTGAGCGGGAGTCTCTAAAAGGCCAAATGAAGTTTTGGTATTTTACCCTC-GAGAGAGTGGGAAAG-------------GTGTGGCATCATCATATTTTTGTCTAAAACGTTTCTGTGAGACCGCTTCCTGAAGTCAGAATTGCACGAAGCAAAAAAagtaagaggtaacg-ttttctgagcacttactttatgccagacactgctct-agtcccctgtatggatagttcacttaactttcccaacaactgtggaaaggcattttcatcactagactcattttacagatgagaaccctga-actcagag-g-ttaattagtttgattagtgt i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55287373 366 + 59248254 AAGTTGAGTGGATTCC-AGATGG-AAAAATAATAAGGAAGAGTATGTGTATTGATTGAGCGGGAGTCTCTAAAAGGCCAAATGAAGTTTTGGTATTTTACCCTC-GAGAGAGTGGGAAAG-------------GTGTGGCATCATCATATTTTTGTCTAAAACGTTTCTGTGAGACCGCTTCCTGAAGTCAGAATTGCACGAAGCAAAAAAagtaagaggtaacg-ttttctgagcacttactttatgccagacactgctctgagtcccctgtatggatagtttacttaactttcccaacaactttggaaaggcgttttcatcactagactcattttacagatgagaaccctga-actcagag-g-ttaattagtttgattagtgt i macFas5.chr19 I 1 C 0 s papAnu2.chr19 3802886 378 - 51301725 AAGTTGAGTGGATTCC-AGATGGAAAAAATAACGAAGAAGAGAATGTGTATGGGTTGAGCGGGAGTCTCTAAAAGGCCAAGTAGAGTTTTGGTATTTTACCCTC-AAGAGAGTGGCAAAGGTTCTGAGCCTCCGTGTGGCATCATCATATTTTCGTCTGGAACATATCGGTGAGACCGCTTCCCGAAGTCAGAACTGCATGAGGCAATCGAAGGAAGAGGTAAC--TTTGCTGATCTCTTGCTCTATGCCAGACACTGCCCTGAGTCCCCCTTACGGCTAGtttctttaa---tcctcacaactgtGGGAAGATATTGTCATCCTTAGGCcagctttacagatgagaacactgacgCTCAGGGAG-TTAATTAATTTGATGAGCCT i papAnu2.chr19 I 1300 C 0 s chlSab2.chr6 47082906 366 + 50890351 AAGCTGAGTGGATTCC-AGGTGG-AAAAATAATAAGGAAAAGTATGTGTATTGATTGAGCGGGAGTCTCTAAAAGGCCAAATGAAGTTTTGGTATTTTACCCTC-AAGAGAGTGGGAAAG-------------GTATGGCATCATCATATTTCTGTCTACAATGTTTCTGTGAGACCGCTTCCTGAAGTCAGAATTGCACGACGCAAAAAAagtaagaggtaacg-ttttctgagcacttactttatgccagacactgctctgagtcccctgtatggatagtttccttaattttcccaacaacttcggaaaggtgttttcatcactagactcattttacagaggagaaccctga-actcagag-g-ttaattagtgtgatcagtgt i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45603525 353 + 49145316 AAGTTGAGTGGACTCC-AG-TGG-GAAAATAATGTGGAACAGTATGTGCATTGATTGAGTAGGAGTGTCCAAAAGGCCAAATAAAGTTTTGGTGTTTTACCCTC-------GTGGGACGGGTTCTGAACGCAAGTGTGGCGTCATCATATTTTTGTCTAAAATGTATTTCTAAGACCGCTTCCTGAAGTCAGACTTGCACGAAGCTGTA------------aatg-tcttctgagccctcgctctatgccagaccctgctctgaatcccctgtatggatagt----ttaattttc---acagctttggaaaggagttttcatcactagacccattttacagatgagaacactga-actcagag-g-tcggttcatttgattggtgt i calJac3.chr22 C 0 C 0 s canFam3.chr1 19782616 362 - 122678785 AATTCCAGAAGAGCCAGAGATGG-GAGAACTAAGCGGGAAATAGTGGGGACTGAATTA------------------CCGTGTAAAGATTTGGGATTTTATCTTTAAAGATTATGGGTGAAGTGTGAAATATAAGCCTGGCATAATCAGATTTTTGTCTGAAACAT-TCACTATGAATCATTTATGGAGACAGAACCCGAGGAGGCAGTAAAaatcatggcaaacatttttctgagcactta---tgtggcagatgctattgtgagtcttacaaatgggtagttcacttaatcagcatcatagctcaggaaaggagtttccattattagacccattttataaatgagaatactgatgcttagag-gattaattaatttgATTAGTgt i canFam3.chr1 C 0 I 2776 a score=25681.000000 s hg38.chr19_GL949747v2_alt 358713 10 + 729520 catgtattaa s panTro4.chr19 59304326 10 + 63644993 cgtgtattaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190050 10 + 60714840 catgcattaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923170 10 - 106955855 catgcattaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60187099 10 + 64156825 catgcattaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55287739 10 + 59248254 catgcattaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3803264 10 - 51301725 CTTGCACCAA i papAnu2.chr19 C 0 I 2461 s chlSab2.chr6 47083272 10 + 50890351 catgcattaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45603878 10 + 49145316 cacgcaTCAA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19782978 2776 - 122678785 I a score=195686.000000 s hg38.chr19_GL949747v2_alt 358723 86 + 729520 catgcat-aatttcatggaaggaactggatttcaacccaggAAG-AAAGTATGTCCTTACCtat--tattattattattattattattat s panTro4.chr19 59304336 68 + 63644993 catgcat-aatttcatggaaggaactggatttcaacccaggaag-AAAGTATGTCCTTACC--------------------tattattat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190060 80 + 60714840 catgtat-aatttcatggaaggaactggatttcaacccaggAAG-AAAGTATGTCCTTACt--------tattattattattattattat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923180 89 - 106955855 catgtat-aatttcatggatggaactggatttcaacccaggaagAAAAGTATGTCCTTACCtattatattattattattattattattat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60187109 83 + 64156825 cacgcat-aatttcatggatggaactggatttcaacccaggaag-AAAGTATGTCCTTACC-----tattattattattattattattat i rheMac3.chr19 C 0 M 688 s macFas5.chr19 55287749 83 + 59248254 cacgcat-aatttcatggatggaactggatttcaacccaggaag-AAAGTATGTCCTTACC-----tattattattattattattattat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47377327 77 + 51301725 CACGCAT-AATttcatggatggaactggattTCAACCCAGGAAG-AAAGTATGTCCTTacc-----tactattattattattat------ i papAnu2.chr19 T 7979 C 0 s chlSab2.chr6 47083282 83 + 50890351 catgcat-aatttcatggatggaactggatttcaacccaggaag-AAAGTATGTCCTTACC-----Tataataataataataataataat i chlSab2.chr6 C 0 I 6 s calJac3.chr22 45603888 84 + 49145316 CATGCATGGATTTCATGGATGGAACTGGGTTTCCACCCAGGAAG-GAAGGATGTCCTTACC-----TTCCTTCCttaataataaaattat i calJac3.chr22 C 0 C 0 e canFam3.chr1 19782978 2776 - 122678785 I a score=382914.000000 s hg38.chr19_GL949747v2_alt 358809 174 + 729520 tattattattattattgagacagagtcttgctctgtcacccaggctggagttcagtggcatgatctcggctcactgcaacctccgcctcccaggttcaagcaattctccttgtctcagcctcctgagtagctgggactacaggcgcccaccaccacgcctggctaacttttgta s panTro4.chr19 59304404 174 + 63644993 tattattattattattgagacagagtcttgctctgtcacccaggctggagttcagtggcatgatctcggctcactgcagcctctgtctcccaggttcaagcaattcttctcgtctcagcctcccaagtagctgggactacaggcgcccgccaccacgcctggctaatttttgta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190140 174 + 60714840 tattattattattattgaaacagagtcttgctctgtcacccaggctggagttcaatggcatgatctcggctcactgcaacctctgcctcccaggttcaagcaattctcctcatctcagcctcccgagtagttgggactacaggcgccctccaccacgcctggctaatttttgta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923269 173 - 106955855 tattattattattCttgagacagagtcttgctctgtcacccaggctggagttcagtagcatgatctcggctcactgtaacctccgcctcccaggttcacaccattctcct-gcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcctggctaacttttgta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55287832 174 + 59248254 tattattattattattgagacagagtcttgctctgttacccaggctggagttcagtggcacaatcgtggctcactgcaacctctgccttccgggtgccagcagttctccttgtctcagcctcccgagtagctgggattacaggctcctgccaccatgcctggctaatttttgta i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47377404 174 + 51301725 tattattattattattgagacagagtcttgctctgttacccaggctggagttcagtggcacaatcttggctcactgcagcctccgcctcctgggtgccaGCAGTTctccttgtctcagcctcccgagtagctgggattacaggctcctgccaccacgcctggctaatttttgta i papAnu2.chr19 C 0 I 812 s chlSab2.chr6 47083371 171 + 50890351 tattattattattattgagacagagtcttgctctgttacccaggctggagttcagtggcacaatctcggctcactgcaacctccgcctcccaggtgccagcagtt---cttgtctcagcctcctgagtagctgggattacaggctcctgccaccacgcctgactaatttttgta i chlSab2.chr6 I 6 C 0 s calJac3.chr22 45603972 174 + 49145316 tattattataattattgagacggagtctcactctgtcactcaggctggagtacagtggtgcgatctcagcttgctgcaacctccgcctcccggattcaagaaattctccttgtttcagcctcccaagtagctgggattacaggtgcgtaccacgatgcctggctaatttttgta i calJac3.chr22 C 0 C 0 e canFam3.chr1 19782978 2776 - 122678785 I e rheMac3.chr19 60187192 688 + 64156825 M a score=160443.000000 s hg38.chr19_GL949747v2_alt 358983 68 + 729520 tttttagtagagacgaggtttcaccatgttgaccaggctgatctgcatctcctgacctc--atgatccac s panTro4.chr19 59304578 70 + 63644993 tttttagtagagacgaggtttcaccatgttgacctggctgatctgcatctcctgacctcagatgatccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190314 70 + 60714840 tttttagtagagacgaggtttcaccatgttgaccaggctgatctgcatctcctgatctcagatgatccac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923442 70 - 106955855 tttttagtagagacgaggtttcaccatgttgaccaggctgatctgcatctcctgacctcagatgatccac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55288007 70 + 59248254 tttttagtagagacgggatttcaccatgttgaccaggctgatctccatctcctgacctcagataatccac i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47378390 70 + 51301725 tttttagtagagacgggatttcaccatgttgaccaggctgatctccatctcctgacctcagataatccac i papAnu2.chr19 I 812 C 0 s chlSab2.chr6 47083542 70 + 50890351 tttttagtagagacgggatttcaccatgttgaccaggctggtctccatctcctgacctcagatgatccac i chlSab2.chr6 C 0 I 317 s calJac3.chr22 45604146 70 + 49145316 tttttagtggagatggggtttcactatgttggccaggctggtcttgaactcctgacctcaggtgatccat i calJac3.chr22 C 0 C 0 e canFam3.chr1 19782978 2776 - 122678785 I e rheMac3.chr19 60187192 688 + 64156825 M a score=5902.000000 s hg38.chr19_GL949747v2_alt 359051 3 + 729520 cca s panTro4.chr19 59304648 3 + 63644993 ccg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190384 3 + 60714840 ccg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923512 3 - 106955855 ccg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55288077 3 + 59248254 ccg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47378460 3 + 51301725 ctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47083929 3 + 50890351 ccg i chlSab2.chr6 I 317 C 0 s calJac3.chr22 45604216 3 + 49145316 ctg i calJac3.chr22 C 0 C 0 e canFam3.chr1 19782978 2776 - 122678785 I e rheMac3.chr19 60187192 688 + 64156825 M a score=153531.000000 s hg38.chr19_GL949747v2_alt 359054 54 + 729520 cctcggcctcccaaaatgctggaattacaggcgtgagccaccgcacccggccGT s panTro4.chr19 59304651 54 + 63644993 ccttggcctcccaaaatgctggaattacaggcgtgagccaccgcacccggccGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190387 54 + 60714840 cctcagcctcccaaaatgctggaattacaggtgtgagccaccgcacccggccGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923515 54 - 106955855 cctcggcctcccaaaatgctggaattacaggcgtgagccaccgcacccggccGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60187884 54 + 64156825 cctcggcctcccagaatgctgggattacaggcgtgagcccccgcacccagcTGG i rheMac3.chr19 M 688 C 0 s macFas5.chr19 55288080 54 + 59248254 cctcggcctcccagaaagctgggattacaggcatgagcccctgcacccggccGT i macFas5.chr19 C 0 I 327 s papAnu2.chr19 47378463 54 + 51301725 cctcggcctcccagaaagctgggattacaggcatgagtccccgCACCCGGCCGt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47083932 54 + 50890351 cctcggcctcccagaatgctgggattacaggcgtgagcccccgcacccggccGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45604219 54 + 49145316 cctcgacctcccacagtgttgggattacaggtgtgaaccaccgtgcctggACGT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19782978 2776 - 122678785 I a score=71380.000000 s hg38.chr19_GL949747v2_alt 359108 25 + 729520 CCTTACCTATTATTGATA-TATCATT s panTro4.chr19 59304705 25 + 63644993 CCTTACCTATTATTGATA-TATCATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190441 25 + 60714840 CCTTACCTATTATTGATA-TATCATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923569 25 - 106955855 CCTTACCTATTATTGATA-TATCATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60187938 25 + 64156825 CCTTACCTATTATTGATA-TATCATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55288461 25 + 59248254 CCTTACCTATTATTGATA-TATCATT i macFas5.chr19 I 327 C 0 s papAnu2.chr19 47378517 25 + 51301725 cctta-ctattattattattattatt i papAnu2.chr19 C 0 I 8257 s chlSab2.chr6 47083986 25 + 50890351 CCTTACCTATTATTGATA-TATCATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45604273 25 + 49145316 CCTTACCTATTATTGATA-TGTCATT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19782978 2776 - 122678785 I a score=10937.000000 s hg38.chr19_GL949747v2_alt 359133 5 + 729520 GTATT s panTro4.chr19 59304730 5 + 63644993 GTATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190466 5 + 60714840 GTATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923594 5 - 106955855 ATATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60187963 5 + 64156825 ATATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55288486 5 + 59248254 ATATT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47084011 5 + 50890351 ATATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45604298 5 + 49145316 ATAtt i calJac3.chr22 C 0 C 0 e canFam3.chr1 19782978 2776 - 122678785 I e papAnu2.chr19 47378542 8257 + 51301725 I a score=6139.000000 s hg38.chr19_GL949747v2_alt 359138 4 + 729520 TCTT s panTro4.chr19 59304735 4 + 63644993 TCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190471 4 + 60714840 TCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923599 4 - 106955855 TCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60187968 4 + 64156825 TCTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55288491 4 + 59248254 TCTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47386799 4 + 51301725 tcaa i papAnu2.chr19 I 8257 C 0 s chlSab2.chr6 47084016 4 + 50890351 TCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45604303 4 + 49145316 tctt i calJac3.chr22 C 0 I 2538 e canFam3.chr1 19782978 2776 - 122678785 I a score=73911.000000 s hg38.chr19_GL949747v2_alt 359142 38 + 729520 AAAGAAAACAAGAAAAACcaagtgtggatagaccagtt s panTro4.chr19 59304739 38 + 63644993 AAAGAAAACAAGAAAAACcaagtgtggatagaccagtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190475 38 + 60714840 AAAGAAAACAAGAAAAACcaagtgtggatagaccagtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923603 38 - 106955855 AAAGAAAACAAGAAAAACCAAGTGTGAATagaccagtt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60187972 38 + 64156825 AAAGAAAACAAGAAAAACCAAGTGTGGATAGACCAGTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55288495 38 + 59248254 AAAGAAAACAAGAAAAACCAAGTGTGGATAGACCAGTT i macFas5.chr19 C 0 I 314 s papAnu2.chr19 47386803 17 + 51301725 aaaaaaaaaaaaaagaa--------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47084020 38 + 50890351 AAAGAAAACAAGAAAAACCAAGTGTGGATagaccagtt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19782978 2776 - 122678785 I e calJac3.chr22 45604307 2538 + 49145316 I a score=4431.000000 s hg38.chr19_GL949747v2_alt 359180 2 + 729520 aa s panTro4.chr19 59304777 2 + 63644993 ag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190513 2 + 60714840 ag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923641 2 - 106955855 ag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60188010 2 + 64156825 AG i rheMac3.chr19 C 0 I 314 s macFas5.chr19 55288847 2 + 59248254 ag i macFas5.chr19 I 314 C 0 s papAnu2.chr19 47386820 2 + 51301725 ag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47084058 2 + 50890351 ag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19782978 2776 - 122678785 I e calJac3.chr22 45604307 2538 + 49145316 I a score=1610651.000000 s hg38.chr19_GL949747v2_alt 359182 744 + 729520 aaagttcttgccttccag---------gacagtgatgatttgtttgcactggaattatcacagcaggaatttcagtaaatatgtggatttatgactgggaggtaggctcagaagaaatgctgatggaAGTTTGGCTTCCAGAAATATCTGACTAGGTTGTTTTAGACTAAACTTCTCACCGTTAATT----------------aaaaaaaaaaaaaaaaaaaaCTTTAggccaggcgcggtggctcacgcctgtaatcccatcaccttgggaggccgaggcaggcagatcatgaggtcaagagatcgagaccatcctggccaacatggtgaaaccccttctctactaaaaatacaaaaattagccaggcgtgttggtggg-----------ttcctgtagtcccagctaccctggaggctgaggcaggagaatcgcttgaacccgggaggtggagattgtagtgagccgagatcgcgccactgcactccagcctgggcaacagagtgagactccgtctc-aaaaacaaaaaaaaaacaaaaaaaacaacaacaactgt-aaaagatgaacaaaaaccaaagaacatctgtctgtagaacttggcatgcttccaaggcagagagaatttagggttccaagacataaaagaggaaggaaaccaagcaaggggactttatcctttgaggttagttttatgttaacggtttgctgattctgaaactaaaggcagcagatgagagaccaaaaagctgagtagGAGCAGGATGAAGAATTTCAacaaa s panTro4.chr19 59304779 750 + 63644993 aaagttcttgccttccag---------gacagtgatgatttgtttgcagaggaattatcacagcaggaatctcggtaaatatgtggatttatgactgggaggtaggctcagaagaaatgctgatggaAGTTTGGCTTCCAGAAATATCTGACTAGGTTGTTTTAGACTAAACTTCTCACCATTAATTaaaaa---------aaaaaaaaaaaaaaaaaaaaaaCTTTAggccaggcgcggtggctcacgcctgtaatcccatcaccttgggaggccgaggcaggcagatcatgaggtcaagagatcaagaccatcctggccaacatggtgaaaccccttctctactaaaaatacaaaaattagccaggcgtgttggtggg-----------cgcctgtagtcccagctaccctggaggctgaggcagaagaatcgcttgaacccgggaggtggagattgtagtgagccgagatcgcgccactgcactccagcctgggcaacagagcgagactccgtctcgaaaaacaaaaacaaaaacaaaaaaaC--Caacaactgt-aaaagatgaacaaataccaaagaacacctgtctgtagaacttggcatgcttccaaggcagagagaatttagggttccaagacataaaagaggaaggaaaccaagcaaggggactttatcctttgaggttagttttatgttaacggtttgctgattctgaaactaaaggcagcagatgagagaccaaaaagctgagtagGAGCAGGATGAAGAATTTCAacaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190515 747 + 60714840 aaagttcttgccttccag---------gacagtgatgatttgtttgcactggaattatcacagcaggaatttcggtaaatatgtggatttatgactgagaggtaggctcagaagaaatgctgatggaAATTTGgcttccagaaatatctgactaggtcgttttagactaaacctctcactgttaattaaaaacaaacaaacaaacaaacaaacaaacaaaaaacTTTAggccaggcactgtggctcacgcctgtaagcccatcacgttgggaggccgaggcaggcagatcacgaggtcaagagatcgagaccatcctggccaacgtggtgaaaccccgcctctactaagaatacaaaaattaaccaggtgtggtggcggg-----------cgcc-gtagtcccagctaccctggaggctgaggcaggagaatcgcttgaacccgggaggcggagattgcagtgagcggagatcgcaccactgcactccagcctgggcgacaaagcgagactccgtctg--------------aaagcaaacagacaaaaaaaactgtaaaaagaggagcaaaaaccaaagaacatctgtctgtagaacttggcacgcttccaaggcagagagaatttagggttccaagacataaaagaggaaggaaaccaagcaaggggactttatcctttgaggttagttttatgttaacggtttgctgattctgaaactaaaggcagcagatgagagaccaaaaagctgagtagGAGCAGGATGAAGAATTTCAacaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923643 739 - 106955855 aaagttcttgccttccaggacagtgatgacagtgatgatttgtttggactggaattatcacagcaggaatttcagtaaatatgtggatttatgacggggaggtaggctcagaagaaatgctgatggaAGTTTGgcttccaaaaatatcggactaggtcgttttagactaaacttctcactgttaata--------------aaaaaaaaaaaacaaaaaaaacctttgggccaggcactgtggttcacgcctgtaatcccatcaccttgggagaccgaggcaggcagatcaggaggccaagagatcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccaggcgtgttggtgcg-----------cacc------tccagctaccctggaggctgaggcaggagaatcgcttgaacccgggaggcggagattgtggtgagtggggatcgcgccactgcactccagcctgggtgacagagcaagattccatctc---------aaaaaaaaaaaaaaaaaaaaaaaaaactgtaaaaagatgaacaaaaaccacagaacatctgtctgtagaacttggcacgcttccaaggcagggagaatttagggttccaagacataaaagaggaaggaaaccaagcaaggggactttatcctttgaggttagttttatgttaatggtttgctgattctgaaactaaaggcagcagatgagagaccaaaaagctg---agGAACAGGATGAAGAATTTCGACAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60188326 746 + 64156825 aaaGTTGTTGCCTTCCAG---------GACAGTGATGATTTGCTTGGACTGGAATTATCACAGCAGGAATTTCAGTAAATATGTGGATTTATGCCTGGGAGGTAGGTTCAGAAGAAACACTGATGGAAGTTTGGCTTCCAGAAATATCTGACTAGGTCGTTTTAGAATAAACTTCTCGCTGTTCATTTAAAAAAAA-----AACAAAAACAAAAAAACAAAAACTTTAGGCCTGTTGTTgtggcttgcgcctgtaatcccagtacctggggaggccaaggtgggcagatcacgaggtcaagagatggagactatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccaggtgtggtggaggg-----------cacctgtagtcccagctactcggaaggctgaggcaggagaatctcttgaacccgggaggtggaatttgcagtgagccaagatcgcaccattgcactccagcctgggcaacagaacgagactctgtctc-----------aaaaaaaaaaaaaaagaaaaaaaaaaTTAaaaagatgaacaaaaaccgaagaacatctgtctgtagaacttggcacgcttccaagtcagagagaatttagggttccaagacataaaagaggaaggaaaccaagcaaagggactttatcctttgaggttagctttatgttaacggtttgctgattctgaaacgaaaggcagcagatgagagaccaaaaagctgagTGGGAGcaggataaagaatttcaacaaa i rheMac3.chr19 I 314 I 963 s macFas5.chr19 55288849 757 + 59248254 aaaGTTGTTGCCTTCCAG---------GACAGTGATGATTTGCTTGGACTGGAATTATCACAGCAGGAATTTCAGTAAATATGTGGATTTATGCCTGGGAGGTAGGTTCAGAAGAAACACTGATGGAAGTTTGGCTTCCAGAAATATCTGACTAGGTCGTTTTAGAATAAACTTCTCGCTGTTCATTTaaaaaaaa-----acaaaaaacaaaaaaacaaaaaCTTTAGGCCTGTTGTTgtggcttgcgcctgtaatcccagtacctggggaggccaaggtgggcagatcacgaggtcaagagatcgagactatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccaggtgtggtggagggcacctgtagtccacctgtagtcccagctactcggaaggctgaggcaggagaatctcttgaacccgggaggtggaatttgcagtgagccaagatcgcaccattgcactccagcctgggcaacagaacgagactctgtctc-----------aaaaaaaaaaaaaagaaaaaaaaaatttaaaaaGAtgaacaaaaaccgaagaacatctgtctgtagaacttggcacgcttccaagtcagagagaatttagggttccaagacataaaagaggaaggaaaccaagcaaagggactttatcctttgaggttagctttatgttaacggtttgctgattctgaaacgaaaggcagcagatgagagaccaaaaagctgagTGGGAGcaggataaagaatttcaacaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47386822 732 + 51301725 aaagttgttgCCTTCCAG---------GACAGTGATGATTTGCTTGGACTGGAATTATCACAGCAGGAATTTCAGTAAATATGTGGATCTATGCCTGGGAGGTAGGTTCAGAAGAAACACTGATGGAAGTTTGGCTTCCAGAAATATCTGACTAGGTCGTTTTAGAATAAACTTCTcactgttcatttaaaaa-----------aaaaaaaaaaaaaaaaaaactttaggccTGTTGttgtggcttgcgcctgtaatcccagtacctggggaggccaaggtgggcagatcacgaggtcaagagatcgagactatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccaggtgtggtggaggg-----------cacctgtagtcccagctactcggaacgctgaggcaggagaatctcttgaacctgggaggtggaatttgcagtgagccaagatcgcaccattgcactccagcctgggcaacagaacgagactctgtctc-----------aaaaaaaaaaa----gaaaaaaaaatttaaaaagatgaacaaaaactGAAGAACATCTGTCTGTAGAACTTGGCACGCTTCCAAGTCAGAGAGACTTTAGGGTTCCAAGACATAAAAGAGGAAGGAAACCAAGCAAAGGGACTTTATCCTTTGAGGTTAGCTTTATGTTAACGGTTTGCTGATTCTGAAACGAAAGGCAGCAGAT----GACCAAAAAGCTGAGTGGGAGCAGGATAAAGAATTTCAACAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47084060 724 + 50890351 aaagttcttgccttccag---------gacagtgatgatttgcttggactggaattatcacagcaggaagtTCAGTAAATATGTGGATTTATGCCTGGG----AGGTTCAGAAGAAACACTGATGGAAGTTTGGCTTCCAGAAATATCTGACTAGGTCATTTTAGAATAAACTTCTCACTGTTCATTAAAGAA--------------------AAAAAACAAACTTTAAGCCAGTTGTTgtggctcgcgcctgtaatcccagtacctggggaggccaaggtgggcagatcacgaggtcaagagattgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccaggtgtggtggaggg-----------cacctgtagtcccagctacttagaaggctgaggcaggagaacctcttgaacccgggaggtggaatttgcagtgagccaagatcgcaccattgcactccagcctgggcaacagaacgagactctgtctc-----------aaaaaagaaaaa---gaaaaaaaaaTTTTaaaagatgaacaaaaaccaaagaacatctgtctgtagcacttggcatgcttccaagtcagagagaatttagggttccaagacataaaagaggaaggaaaccaagcaaggggactttatcctttgaggttagctttatgttaatggtttgctgattctgaaacgaaaggcagcagatgagagaccaaaaagctgagTGGGAGcaggataaagaatttcaacaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19782978 2776 - 122678785 I e calJac3.chr22 45604307 2538 + 49145316 I a score=35343.000000 s hg38.chr19_GL949747v2_alt 359926 18 + 729520 gaactagcaaatataaga s panTro4.chr19 59305529 18 + 63644993 gaactagcaaatataaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56191262 18 + 60714840 gaactagcaaatataaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102924382 18 - 106955855 GAACTAGCAAATATAAGA i nomLeu3.chr10 C 0 I 124 s macFas5.chr19 55289606 18 + 59248254 gaactagcaaatataaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47387554 18 + 51301725 GAACTAGCAAATATAAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47084784 18 + 50890351 gaactagcaaatataaga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19782978 2776 - 122678785 I e calJac3.chr22 45604307 2538 + 49145316 I e rheMac3.chr19 60189072 963 + 64156825 I a score=492467.000000 s hg38.chr19_GL949747v2_alt 359944 292 + 729520 acaaacacagccggacgcggtggctcacacctgtaatcccaatactttgggaggccaaggcgggtggatcacctgagcttgggggtttgagatcagcctgaccaacagggagaaaccccatctctactaaaaatacaaaattagccggactcagtggcgcatgcctgtaatcccagctactcaggaggctgaggcgggagaatcgcttgaacccaggaggcggaggttgcagtgaaccgagatggtgccactacactccagcctgggtgacagagtgagattccatctcaaa s panTro4.chr19 59305547 291 + 63644993 acaaacacagctggacacggtggctcacacctgtaatcccagtactttgggaggccaaggagggtggatcacctgagcttgggggtttgagatcagcctgaccaacagggagaaaccccatctctactaaaaatacaaaattagccggactcagtggtacatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgaactgagatggtgccactgcactccagcg-gggcaacagagtgagattccgtctcaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56191280 292 + 60714840 acaaacacggccggatgcggtggctcacacctgtaatcccagcactttcagaggccaaggcgggcggatcacctgaggtcgggggtttgagatcagcctgaccaacagggagaaaccccatctctactaaaaatacaaaattagccggacgcagtggctcatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcgtagattgcagtgagccgagatggtgccactgcactccagcctgggcaacagagtgagattccatctcaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102924524 292 - 106955855 acaaaaTTAgccggacgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggatcacctgaggtcgggggtttgagatcagcctgaccaacagggagaaaccccatctccactaaaaatacaaaattagccggacgcagtggctcacgcctgtaatcccagctactcagaaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagccgagatggtgccactgcactccagcctgggtgacagagtgagattctgtctcaaa i nomLeu3.chr10 I 124 C 0 s macFas5.chr19 55289624 292 + 59248254 acaaacacagccgggcgtggtggctcacgcctgtaatcccagcactttgggaggccggagggggcggatcacctgaggtggggggtttgagaccagcctgaccaacagggagaaaccccgtctctactaaaactacaaaattagccggacacagtggctcatgcccgtaatcccagctactcaggaggctgaggcaggagaatctcttgaacctgggaggcggaggttgcagtgagctgagatcgcaccactgcactccagcccgggcaacagagcaagactccatctcaaa i macFas5.chr19 C 0 I 587 s papAnu2.chr19 47387572 292 + 51301725 ACAAacacggccgggcgtggtggctcacgcctgtaatcccagcactttgggaggccggagggggcgtatcacctgaggtggggggtttgagaccagcctgaccaacagggagaaaccctgtctctactaaaaatacaaaattagccggacacagtggctcatgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaacccgggaggcggaggttgcaatgagccgagatcgcaccattgcactccagcccgggcaacagagcaagactccatctcaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47084802 280 + 50890351 acaaacacggctgggcgtg------------tataatcccagcactttgggaggctggagggggcggatcacctgaggtggggggtttgagaccagcctgaccaacagggagaaaccccatctctacttaaaatacaaaattagccggacacagtgactcatgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaacccaggaggcggaggttgcagtgagccgagatcacaccattgcactccagcccgggcaacagagcaagactccatctcaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19782978 2776 - 122678785 I e calJac3.chr22 45604307 2538 + 49145316 I e rheMac3.chr19 60189072 963 + 64156825 I a score=6790.000000 s hg38.chr19_GL949747v2_alt 360236 3 + 729520 aaa s panTro4.chr19 59305838 3 + 63644993 aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56191572 3 + 60714840 aaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102924816 3 - 106955855 aaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60190035 3 + 64156825 aaa i rheMac3.chr19 I 963 C 0 s macFas5.chr19 55290503 3 + 59248254 aga i macFas5.chr19 I 587 C 0 s papAnu2.chr19 47387864 3 + 51301725 aaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47085082 3 + 50890351 aaa i chlSab2.chr6 C 0 I 659 e canFam3.chr1 19782978 2776 - 122678785 I e calJac3.chr22 45604307 2538 + 49145316 I a score=4775.000000 s hg38.chr19_GL949747v2_alt 360239 6 + 729520 gaaa----aa s panTro4.chr19 59305841 6 + 63644993 gaaa----aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56191575 6 + 60714840 gaaa----aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102924819 10 - 106955855 gaaaaaagaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60190038 6 + 64156825 gaaa----ga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55290506 6 + 59248254 aaaa----ga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47387867 6 + 51301725 acaa----aa i papAnu2.chr19 C 0 I 573 e canFam3.chr1 19782978 2776 - 122678785 I e calJac3.chr22 45604307 2538 + 49145316 I e chlSab2.chr6 47085085 659 + 50890351 I a score=12576.000000 s hg38.chr19_GL949747v2_alt 360245 11 + 729520 gaaaaaaaaag s panTro4.chr19 59305847 11 + 63644993 gaaaaaaaaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56191581 11 + 60714840 gacaaaaaacg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102924829 11 - 106955855 aaaagaaaaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60190044 11 + 64156825 aagaaagaaag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55290512 11 + 59248254 aagaaagaaag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47388446 11 + 51301725 aaggaaggaag i papAnu2.chr19 I 573 C 0 e canFam3.chr1 19782978 2776 - 122678785 I e calJac3.chr22 45604307 2538 + 49145316 I e chlSab2.chr6 47085085 659 + 50890351 I a score=2001295.000000 s hg38.chr19_GL949747v2_alt 360256 875 + 729520 aaaatacgggacatggtgaaaatacttaacatatgtacaactggaatcccataaggggaagaaagacagagaaagagaa--aggcagacacgatattggaagggttactgaacaatatttcctaaaatgaatcaaaaacatcaagccacaCAGtagatgtccagtaggaacttaaacctcacgtgtttataacatgttataatataagttgcttatattcactcccaaatctcctcctcctaaggtctttcccatctcagtaaatgagaattccagccactagttatttgggc----------aaaaaa--aaaaaataagtgttacccttgactccatgtttttcctcatatcccacagctgtgagtacattatcagacatttccctttgaaatatctccagaatagtatcatttctctccacctcttggagaccacccgagcctgaaccactgtctgctgtacctggatcattgcaagagcttcctaactaatccttcttgcatctaacattcctcctctattaatctgttctccacacagtagcagagttgtcttgtaagaagataaCGATTCTCCCAAGGATCACAGCCAATCAGACACAGCAATGGCTGCTCCAAGCCACAGGGATGCCTGCTCATGCACCGTGCCAGCCAAGCTCGTTTCTGGAGTTTTGGGTGGGTCCGGATGAGAGAAGACAATAGCTAA-CTTTATGGCTGTCATTCTGGGAAATCATTCCCTTGAGAACAGAGCTTTGTCAAAAGAAGGTGGATTCTACAAAAGATTAAGCAGTAAATGACTCAAAAGATGATCAGGCAATGGGGGAAAATTAGCCAAGAGCTGATTCCTATGAAATGTTTTATTATTCCTGTGAAATTTTTGCATTAAT s panTro4.chr19 59305858 876 + 63644993 aaaatacgggacgtggtgaaaacacttaacataggtacaactggaatcccataagggaaagaaagacagagaaagagaatgaggcagacacaatattggaagggttactgaacaatatttcctaaaatgaatcaaaaacatcaagccacaCAGtagatgtccagtaggaacttaaacctcacatgtttataacatgttataatataagtttcttatattcactcccaaatctgctcctcctaaggtctttcccatctcagtaaatgagaattccagccactagttatttgggc---aaaaaaaaaaaaa--aaaaaataagtgttacccttgactccatgtttttcctcatatcccacagctgtgagtacattatcagccatttccctttgaaacatctccagaattgtatcatttctctccacctcttggagaccacccgagcctgaaccactgtctgctgtacctggatcattgcaagagcttcctaactaatccttcttgcatctaacattccttc--------tctgttctccacacagtagcagagttgtcttgtaaaaagataaCGATTCTCCCAAGGATCACAGCCAATCAGACACAGCAATGGCTGCTCCAAGCCACAGGGATGCCTGCTCACGCACCGTGCCAGCCAAGCTCGTTTCTGGAGTTTTGGGTGGGTCCGGATGAGAGAAGACAATAGCTAA-CTTTATGGCTGTCATTCTGGGAAATCATTCCCTTGAGAACAGAACTTTGTCAAAAGAAGGTGGATTCTACAAAAGATTAAGCAGTAAATGACTCAAAAGATGATCAGGCAATGGGGGAAAATTAGCCAAGAGCTGATTCCTCTGAAATGTTTTATTATTCCTGTGAAATTTTTGCATTAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56191592 871 + 60714840 aaaatatgggacgtagtgaaaacgcttaacataggtacaactggaatcccataaggggaagaaagacagagaaagagaatgaggcagacacaatattggaagggttactgaacaatatttcccaaaatgaatcaaaaacatcaagccacaCAGtagacgtccagtaggaacttaaacctaacatgtttataac-----------taagtttcttatattcactcccaaatctgctcctcctaaggtcttccccatctcagtaaatgagaattccagtcactagttatttgggc-----aaaaaaaaaaa--aaaaaaaaagtgttatccctgactccatatttctcctcataacccacagttgtgagtatattataagacatttccctttgaaatatctccagaatcgtatcatttctcaccacctcttggagaccacctgggcctgaaccactgtctgctgtacctggatcattgcaagagcttcctaactaatccttcttgcatctaacattcctcctctattaatctgttctccacacagtagcagagttgtcctgtaaaaagataaTGATTCTCCCAAGGATCACAGCCGATCAGACACAGCAATGGCTGCTCCAAGCCACAGGGATGCCTGCCCACGCACGGTGCCAGCCAAGCTCGTTTCTGGAGTTTTGGGTGGGTCCGGATGAGAGAAGACAATAGCTAA-CTTTATGGCTGTCATTCTGGGAAATCATTCCCTTGAGAACAGAACTTTGTCAAAAGAAGGTGGATTCTACAAAAAATTAAGTGGTAAATGACTCAAAAGATGATCAGGCAATGGGGGAAAATTAGCCAAGAGCAGATTCCTATGAAACGTTTTATTATTCCTGTGAAATTTTTGCATAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102924840 874 - 106955855 aaaatatgagacgtggtgaaaacgcttaacatatgtacagttggaatcccataaggggaagaaagacagagaaagagaatgaggcagacgcaatattggaagggttattgaacaatatttcctaaaattaatcaaagacatcaagccacaCAGtagatgtccagtaggaacttaaagctaacatgcttataac-----------taagtttcttatattcactcccaaatctgctccttctaaggtcttccccatctcagtaaatgagaattccagtcactagttatttgggcaaaaaaaaaaaaaaaa--aaaaaaaaagcgttatcctcgactccatgttgtccctcatatcccaccaccgtgagtatattacaaggtgtttccctttgaaatatctccagaatcgtatcatttctcaccacctcttggagaccacccgggcctgaaccactgtctgctgtacctggatcattgcaagagcttcctaacgaatccttcttgcatctaacattcctcctctattaatctgttctccacacagcagcagagttgtcctgtaaaaaG--AACAATTCTCCCAAGGATTAGAGCCGATCAGACACAGCAATGGCTGCTGCAAGCCACAGGGATGCCTGCTCACGCACCGTGCCAGCCAAGCTCATTTCTGGAGTTTTGGGTGGGTCTGGATGAGAGAAGACAATAGCTAA-ATTTATGGCTATCATTCTGGGAAATCATTCTCTTGAGAACACAACTTTGTCAAAAGAAGGTGGATTCTACAAAAGCTTAAGTGGTAAATGACTCAAAAGATGATCAGGCGATGGGGGAAAATTAGCCAAGAGCTGATTCCTGTGAAATGTCTTATTATTCCTGTGAAATTTTTGCGTAAAT i nomLeu3.chr10 C 0 M 705 s rheMac3.chr19 60190055 869 + 64156825 aaaatatgggacgtggtgaaaacgcttaacatatgtacaactggaatcccataaggggaagaaagacagagaaagagaatcaggcagacacaatattggaagggttactaaacaatatttcctaaaacgaataaaagacatcaagccacaCAGtaggtgtccagtaggaacttaaacctaacatgtttataac-----------caagtttcttatattcactcccagatctgctccttttaaggtcttccccatctcagtaaatgagaattccagtcactagttatttggga---------aaaaaaaatatatatatagtgttatccttgactctatgcttttcctcatatctcacagctgtgaacacattataagacgttttcctttgaaatatctccagaatcgcatcatttcccaccacctcttgaagaccacccgggcctgaaccactgtctgctgtacctggatcattgcaagagcttcctaattaatccttcttgcatctaacattcctcgtctattaatctgttatccacccagtagcagagttgtcctgtaaaaagataaCGTTTCTCCCAAGGATCAGAGACGATCAGACACAGCAGTGGCTGCTCCAAGCCACAAGGACGCCTGCCCACGCATCGTGCCAGCCAAGCTCGTTTCTGGAGTTTTGGGTGGCTCCAGATGAGAGAAGACAATAGCTGA-GTTTATGGCTGTCATTCTGGGAAATCATTCCCTTGAGAACAGAACTTTGTCAGAAGAAGGTGGAGTCTACAAAAGATTATGCGGTAAATGACTCAAAATATGATCAGGCAATGGGGGAAAATTAGCCAAGAGCTGATTCCTATGAAATGTTTTTTTATTCCTGTGAAATTTTTGCATAAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55290523 867 + 59248254 aaaatatgggacgtggtgaaaacgcttaacatatgtacaactggaatcccataaggggaagaaagacagagaaagagaatcaggcagacacaatattggaagggttactaaacaatatttcctaaaacgaataaaagacatcaagccacaCAGtaggtgtccagtaggaacttaaacctaacatgtttataac-----------caagtttcttatattcactcccagatctgctccttttaaggtcttccccatctcagtaaatgagaattccagtcactagttatttggg-----------aaaaaaatatatatatagtgttatccttgactctatgcttttcctcatatctcacagctgtgaacacattataagacgtttccctttgaaatatctccagaatcgcatcatttcccaccacctcttgaagaccacccgggcctgaaccactgtctgctgtacctggatcattgcaagagcttcctaattaatccttcttgcatctaacattcctcgtctattaatctgttatccacccagtagcagagttgtcctgtaaaaagataaCGTTTCTCCCAAGGATCAGAGACGATCAGACACAGCAGTGGCTGCTCCAAGCCACAAGGACGCCTGCCCACGCATCGTGCCAGCCAAGCTCGTTTCTGGAGTTTTGGGTGGCTCCAGATGAGAGAAGACAATAGCTGA-GTTTATGGCTGTCATTCTGGGAAATCATTCCCTTGAGAACAGAACTTTGTCAGAAGAAGGTGGAGTCTACAAAAGATTATGCGGTAAATGACTCAAAATATGATCAGGCAATGGGGGAAAATTAGCCAAGGGCTGATTCCTATGAAATGTTTTTTAATTCCTGTGAAATTTTTGCATAAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47388457 866 + 51301725 gaaatatggGACGTGGTGAAAACGCTTAACATATGTGCAACTGGAATCCCATAAGgggaagaaagacagagaaagagaatcagGCAGACACAATATTGGAAGGGTTACTAAACAATATTTCCTAAAACGAATCAAAGACATCAAGCCACACGGTAGGTGTCCAGTAGGAACTTAAACCTAACATGTTTATAAC-----------TAAGTTTCTTATATTCACTCCCAGATCTGCTCTTTTTAAggtcttccccatctcagtaaatgagAATTCCAGTCACtagttttttggg-----------aaaaaa--atatatatagtgttaTCCTTGACTCTATGCTTCTCCTCATATCTCACAGCTGTGAACACATTATAAGATGTTTCCCTTTGAAATATCTCCAGAATCGCATCATTTCCCACCACCTCTTGAAGACCACCCGGGCCTGAACCACTGTCTGCTGTACCTGGATCATTGCAAGAGCTTCCTAATTAATCCTTCTTGCATCTAACATTCCTCGTCTATTAATCTGTTCTCCACCCAGTAGCAGAGTTGTCCTGTAAAAAGATAACGTTTCTCCTAAGGATCAGAGCCGATCAGACACAGCAGTGGCTGCTCCAAGCCACAGGGATGCCTGCCCACGCATCGTGCCAGCTAAGCTCGTTTCTGGAGTTTTGGGTGGCTCCGGATGAGAGAAGACAATAGCTTCTGTTTATGGCTGTCATTCTGGGAAATCATTCCCTTGAGAACAGAACTTTGTCAGAAGAAGGTGGATTCTACAAAAGATTATGCGGTAAATGACTCAAAAGATGATCAGGCAACGGGGGAAAATTAGCCAAGAGCTGATTCCtatgaaatgttttattattccTGTGAAATTTTTGCATAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47085744 865 + 50890351 aaAAtatgggatgtggtgaaaacgcttaacatatgtacaactggaatcccataaggggaagaaagacagagaaagagaatcaggcagacacaatattggaagggttactaaacaatatttcctaaaacgaatcaaagacatcaagccacaCAGtaggtgtccagtaggaacttaaacctaacatgtttataac-----------caagtttcttatattcactcccagatctgctccttctgaggtcttccccttctcagtaaatgagaattccagtcactacttatttggg-----------aaaaaa-tatatatatagtgttatccttgactctatgcttttcctcatatcccaccactgtgaacacgttat-agacatttccctttgaaatatctccagaatcgcatcatttcccaccacctcttggagaccacccgggcctgaaccactgtctgctgtacctggatcattggaagagcttcctaattaatccttctagcatctaacattcctcctctattaagctgttctccacccagtagcagagttgtcctgtaaaaagataaCATTTCTCCCAAGGATCAGAGCCGATCAGACACAACAGTGGCTGCTCCAAGCCACAGGGACGCCTGCCCACGCACCGTGCCAGCCAAGCTCGTTTCTGGAGTTTTGGGTGGCTCCGGATGAGAGAAGACGATAGCTGA-CTTTATGGCTGTCATTCCGGGAAATCATTCCCTTGAGAACAGAACTTTGCCAGAAGAAGGTGGATTCTACAAAAGATTATGCGGTAAATGACTCAAAAGATGATCGGGCAATGGGGGAAAATTAGCCAAGAGCTGATTCCTATGAAATGTTTTATTATTCCTGTGAAAGTTTTGCATAAAT i chlSab2.chr6 I 659 C 0 e canFam3.chr1 19782978 2776 - 122678785 I e calJac3.chr22 45604307 2538 + 49145316 I a score=8022.000000 s hg38.chr19_GL949747v2_alt 361131 4 + 729520 CAAG s panTro4.chr19 59306734 4 + 63644993 CAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56192463 4 + 60714840 CAAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60190924 4 + 64156825 CAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55291390 4 + 59248254 CAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47389323 4 + 51301725 CAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47086609 4 + 50890351 CAAG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19782978 2776 - 122678785 I e calJac3.chr22 45604307 2538 + 49145316 I e nomLeu3.chr10 102925714 705 - 106955855 M a score=250809.000000 s hg38.chr19_GL949747v2_alt 361135 121 + 729520 ACCATGAATTTGGAAGGAGCCCTTCTTGGAG--AAGACCTCTTCATTGGAAGCAATGGTCCCTGTACAGGTGGCTGAGAGGAACACAACAAAAGCAACGTCCAGGTAGAGCAGGAAGGATGCC s panTro4.chr19 59306738 120 + 63644993 ACCATGAATTTGGAAGGAG-CCTTCTTGGAG--AAGACCTCTTCATTGGAAGCAATGGTCCCTGTACAGGTGGCTGAGAGGAACACAACAAAAGCAACGTCCAGGTAGAGCAGGAAGGACGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56192467 120 + 60714840 ACGGTGGCTTTGGAAGGAGCCCTCCTTGGA---AAGACCTCTTCATTGGAAGCAATGGTCCCTGTACAGGTGGCTGAGAGGAACACAACAAAAGCAACGTCCACTTAGAGCAGGAAGGGCGCC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60190928 121 + 64156825 ACTGTGGCTTTGGAAGGAGCCCTCCTTGGAG--AAGACGTCTTCATTGGAATCAACGGTCCCTGTACAGGTGACTGAGAGGAACACAATCAAACCAACCTCCAGGTAGAGCAGGAAGGACGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55291394 121 + 59248254 ACTGTGGCTTTGGAAGGAGCCCTCCTTGGAG--AAGACGTCTTCATTGGAATCAACGGTCCCTGTACAGGTGACTGAGAGGAACACAATCAAACCAACCTCCAGGTAGAGCAGGAAGGACGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47389327 121 + 51301725 ACTGTGGCTTTGGAAGGAGCCCTCCTTGGAG--AAGACGTCTTCATTGGAAGCAACGGTCCCTGTACAGGTGACTGAGAGGAACACAATCAAACCAACCTCCAGGTAGAGCAGGAAGGACGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47086613 121 + 50890351 ACTGTGGCTTTGGAAGGAGCCCTCCTTGGAG--AAGACGTCTTCATTGGAAGCAACGGTCCCTGTACAGGTGACTGAGAGGAACACAATCAAACCAACCTCCAGGTAGAGCAGGAAGGACGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45606845 118 + 49145316 ACTGTGGCTTTGGAAAGAGCCCTCCTTGCCATTTAGAGCTCTTCAGTGGAAGCAGTGGTCCCTGTGGAGGTGGCTGAGAAGGGCACAAC-----CAATGTCCAGGCCGAGCAGGAAGGAAACC i calJac3.chr22 I 2538 C 0 e canFam3.chr1 19782978 2776 - 122678785 I e nomLeu3.chr10 102925714 705 - 106955855 M a score=349323.000000 s hg38.chr19_GL949747v2_alt 361256 144 + 729520 CCTCAGGAGCAAGGAGTGGTCATCAGGTGAAACCC-AAGGTGTCTTCTTAGAGAGTGAAGGTCCCGGGTACCTGCCGCCAGGTCCTAGTGACCAGCCCCCAGAGTGGAAGTACAAGGGTAATGCCCAGCTACTCACACCGGGGGG-- s panTro4.chr19 59306858 144 + 63644993 CCTCAGGAGCAAGGAGTGGTCATCAGGTGAAACCC-AAGGTGTCTTCTTAGAGAGTGAAGGTCCCGGGTACCTGCCGCCAGGTCCTAGTGACCAGCCCCCAGAGTGGAAGTACAAGGGTAATGCCCAGCTACTCACACCAGGGGG-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56192587 140 + 60714840 CCTCAGGAGCAAGGAGTGGTCATCAGGTAAAACCC-AAGGTGTCTTCTTAGAGAGTGAAGGTCCTGGGTACCTGCTGCCAGGTCCTAGTGACCAGCTCCCAGAATGGAAGTACAAGGGTAATGCCCAGCTACTCACAC----GGG-- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60191049 140 + 64156825 CCTCAGGAGCAAGGAGGGGTCACCGGGTGAGACCC-AGGGTGTCTCCTTAGAGAGTGAAGGTCCCGGGTACCTGCCGCCAGGTCCTGGTGACCAGCCTGCAGAATGGAAGTACAAGGGTAATGCCCAACTACTCACAC----GGG-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55291515 140 + 59248254 CCTCAGGAGCAAGGAGGGGTCACCGGGTGAGACCC-AGGGTGTCTCCTTAGAGAGTGAAGGTCCCGGGTACCTGCTGCCAGGTCCTGGTGACCAGCCTGCAGAATGGAAGTACAAGGGTAATGCCCAACTACTCACAC----GGG-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47389448 140 + 51301725 CCTCAGGAGCAAGGAGGGGTCATCGGGTGAGACCC-AGGGTGTCTCCTTAGAGAGTGAAGGTCCCAGGTACCTGCTGCCAGGTCCTGGTGACCAGCCTGCAGAATGGAAGTACAAGGGTAATGCCCAGCTACTCACAC----GGG-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47086734 140 + 50890351 CCTCAGGAGCAAGGAGGGGTCATCGGGTGAGACCC-AGGGTGTCTCCTTAGAGAGTGAAGGTCCCGGGTACCTACCGCCAGGTCCTGGTGACCAGCCTGCAGAATGGAAGTACAAGGGTAATGCCCAGCTACTCACAC----GGC-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45606963 140 + 49145316 CCTCAGGAGCAAGGAG-GGTCATCAGGTGAGACCCTAGGGTTTCTCCTTAGAGAAGGAAGGTCTGGGGTACCTGCCACCAGGTGCTAGCGACCAGTCCCCAGAATGGAAATACAAGGGTCATGCCCAGCTGCTCACAC----GGG-- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19785754 138 - 122678785 CCCCAGAACTGGGAGGAGGCTGTCAGGTGAGACCC---CCTGGCTCATTTGACAAGGAATGTCCAAGCTGTGTGCCACCGACTCCTAGT-ACCAGCCC-CAGAAGGGAAGTGTGAGGATAACACCTAGGTATTTACAC----AGAGG i canFam3.chr1 I 2776 C 0 e nomLeu3.chr10 102925714 705 - 106955855 M a score=99803.000000 s hg38.chr19_GL949747v2_alt 361400 36 + 729520 TGATGTCCTGGAGAAAGGGCTGACAGCAGCTTACCT s panTro4.chr19 59307002 36 + 63644993 TGATGTCCTGGAGAAAGGGCTGACGGCAGCTTACCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56192727 36 + 60714840 TGATGTCCTAGAGACAGGGCTGACGGCAGCTTACCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102926419 36 - 106955855 TGATGTCCTGGAGATAGGGCTGACGGCAGCTTACCT i nomLeu3.chr10 M 705 C 0 s rheMac3.chr19 60191189 36 + 64156825 TGATGTCCTGGATATAGGGCTGATGGTAGCTTACCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55291655 36 + 59248254 TGATGTCCTGGAGACAGGGCTGATGGTAGCTTACCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47389588 36 + 51301725 TGATGTCCTGGAGATAGGGCTGATGGCAGCTTACCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47086874 36 + 50890351 TGATGTCCTGGAGATAGGGCTGATGGCAGCTTACCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45607103 20 + 49145316 TGATGTCCTGGAGCTAGAGC---------------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19785892 32 - 122678785 ---TGCCCAAGGGATGGGGC-AGCAGCAGCTCACCT i canFam3.chr1 C 0 I 401 a score=171190.000000 s hg38.chr19_GL949747v2_alt 361436 58 + 729520 GGACTGCTGGCATCATTATCACATGCATGCCACATGCCTTCATGAAAATCAAAGTCTC s panTro4.chr19 59307038 58 + 63644993 GGATTGCTGGCATCATTATCACATGCATGCTACATGCCTTCATGAAAATCAAAGTCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56192763 58 + 60714840 GGATTGCTGGCATCATTATCACGTGCATGCCACATGCCTTCATGAAAATCAAAGTCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102926455 58 - 106955855 GGATTGCTGGCATCATTATCACATGCATGCCGCATGCCTTCATGAAAATCAAAGTCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60191225 58 + 64156825 GGATTGCTGACATCATTGTCACATGCATGCCACATGCCTTCATGAAAATCAAAGTCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55291691 58 + 59248254 GGATTGCTGACATCATTGTCACATGCATGCCACATGCCTTCATGAAAATCAAAGTCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47389624 58 + 51301725 GGATTGCTGACGTCATTGTCACATGCATGCCACATGCCTTCATGAAAATCAAAGTCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47086910 58 + 50890351 GGATTGCCGACATCATTGTCACATGCATGCCACATGACTTCATGAAAATCAAAGTCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45607123 52 + 49145316 ----TGCTGGCAACATTGTCACATGCATGCCACATTCCTTCATGAAAATC--AGTCTC i calJac3.chr22 C 0 I 378 e canFam3.chr1 19785924 401 - 122678785 I a score=426503.000000 s hg38.chr19_GL949747v2_alt 361494 173 + 729520 CCTCCAAAGTGCAAGTCCAATTCCATAAAATAAGGCATGCTGATCATAAAATACGATTTGGCAATAAAATGGCAGTATAGCAAAAGCACTGGCCACTTTGTGTCACTCCTTAGtatggtttggatctgtgtccccaccaaatctcatgtcgaattgtcatctccagtgttgga s panTro4.chr19 59307096 173 + 63644993 CCTCCAAAGTGCAAGTCCAATTCCATAAAATAAGGCATGCTGATCATAAAATACGATTTGGCAATAAAATGGCAGTATAGCAAAAGCACTGGCCACTTTGTGTCACTCCTTAGtatggtttggatctgtgtccccaccaaatctcatgtcgaattgtcatctccagtgttgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56192821 173 + 60714840 CCTCCAAAGTGCAAGTCCAATTCCATAAAATGAGGCATGCTGATCATAAAATACGATTTGGCAATAAAATGGCAGTATAGCAAAAGCACTGGCCGCTTTGTGTCACTCCTTAGtatggtttggatctgcgtccccaccaaatctcatgtcgaattgtcatctccagtgttgga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102926513 173 - 106955855 CCTCCAAAGTGCGAGTCCAATTCCATAAAATAAGGCATGCTGACCATAAAATACGATTTGGCAATAAAATGGCAGTATAGCGAAAGCACTGGCCACTTTGTGTCACTCCTTAGCatggtttggatctgtgtccccaccaaatctcatgtcgaattgtcatctccagtgttgga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60191283 173 + 64156825 CCTCCAAAGTTCAAGTCCAATTCCATAAAATAAGGCATGCTGATCATAAAATACAATTTGGCAATTAAGTGGCAGTATAGCAAAAGCACTGGCCACTTTGTGTAACTCCTTAGtgtggtttggatctgtgtccccaccaaacctcatgtcgaactgttatctccagggttgga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55291749 173 + 59248254 CCTCCAAAGTTCAAGTCCAATTCCATAAAATAAGGCATGCTGATCATAAAATACAATTTGGCAATTAAGTGGCAGTATAGCAAAAGCACTGGCCACTTTGTGTCACTCCTTAGtgtggtttggatctgtgtccccaccaaacctcatgtcgaactgttatctccagggttgga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47389682 173 + 51301725 CCTCCAAAGTGCAAGTCCAATTCCATAAAATAAGGCATGCTGATCATAAAATACAATTTGGCAATTAAGTGGCAGTATAGCAAAAGCACTGGCCACTTTGTGTCACTCCTTAGTGTGGTTTggagctgtgtccccaccaaaccTCATGTCGAACTATTATCTCCAGGGTTGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47086968 173 + 50890351 CCTCCAAAGTGCAAGTCCAATTCCATAAAATAAGGCATGCTGATCATAAAATACAATTTGGCAATTAAGTGGCAGTATAGCAAAAGCACTGGCCACTTTGTGTCACTCCTTAGtgtggtttggatctgtgcccccactaaatctcatgtcgaactgttatctccagtgttgga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 45607175 378 + 49145316 I a score=44781.000000 s hg38.chr19_GL949747v2_alt 361667 34 + 729520 ggtggggactggtgggaggtgat----------------------------------------------------tggctcatggg s panTro4.chr19 59307269 23 + 63644993 ggtggggactggtgggaggtgat--------------------------------------------------------------- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102926686 86 - 106955855 agtggggactggtgggaggtgattgggtcatgggggtggctccggtatgaatggGGGGGACAGGTGGGAGGTGACTGGCTCATGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60191456 34 + 64156825 ggtggggactggtgggaggtgat----------------------------------------------------tggctcatggg i rheMac3.chr19 C 0 I 374 s macFas5.chr19 55291922 34 + 59248254 ggtggggactggtgggaggtgat----------------------------------------------------tggctcatggg i macFas5.chr19 C 0 I 208 s papAnu2.chr19 47389855 34 + 51301725 GGTGgagactggtgggaggtgat----------------------------------------------------tggctcatgga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47087141 34 + 50890351 ggtggggactggtgggaggtgat----------------------------------------------------tggctcatggg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e ponAbe2.chr19 56192994 0 + 60714840 C e calJac3.chr22 45607175 378 + 49145316 I a score=85297.000000 s hg38.chr19_GL949747v2_alt 361701 70 + 729520 ggtggctcctgcatgaatggtggggactggtgggaggtgactggctcatgggggtggctcctgcatgaat s panTro4.chr19 59307292 29 + 63644993 -----------------------------------------tggctcatgggggtggctcctgcgtgagt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102926772 70 - 106955855 GGTGGCTCCAGTATGAATTGGGGGGACAGGTGGGAGGTGACTGGCTCATGGGGGTGGctccggtatgaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60191864 70 + 64156825 ggtggctctggtatgaatggtGGGGACTGGTGGGAGGCGATAGGCTCATGGGGGTGGctccggtatgaat i rheMac3.chr19 I 374 C 0 s macFas5.chr19 55292164 70 + 59248254 ggtggctccggtatgaatggtggggactggtgggaggtgattggttcgtggaggtggctccggtatgaat i macFas5.chr19 I 208 C 0 s papAnu2.chr19 47389889 70 + 51301725 gGTGGCTCTGGTATGAACggtggggactggtgggaggcGATAGGCTCATGGGGGTGGCTCTGGTATGAAt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47087175 70 + 50890351 ggtgactctggcatgcatggtGGGGACTGTTGGGAGGTGATTGGTTCATGGCAGTGGctccggtgtgaat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e ponAbe2.chr19 56192994 0 + 60714840 C e calJac3.chr22 45607175 378 + 49145316 I a score=424068.000000 s hg38.chr19_GL949747v2_alt 361771 210 + 729520 ggtggggactggtgggaggtgattggctcatgggggtggctcctgcgtgaatggtggggactggtgggaggtgattggctcatgggggtggctcctgcgtgaatggtggggactggtgggaggtgactggctcatgggggtggctccggtatgaatggtggggactggtgggaggtgattggctcatgggggtgg--------------------------------------------------------ctccagcatgaatgg s panTro4.chr19 59307321 210 + 63644993 ggtggggactggtgggaagtgattggctcatgggggtggctcctgcgtgaatggtggggactggtgggaggtgattggctcatgggggtggctcctgcgtgaatggtggggactggtgggaggtgactggctcatgggggtggctccggtatgaatggtggggactggtgggaggtgattggctcatgggggtgg--------------------------------------------------------ctccagcatgaatgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56192994 209 + 60714840 ggtggggactggtgggaggtgattggctcatgggggtggctcctgcgtgaacggtGGGGACTGCTGGGAGATGATTGGCTCAT-GGGGTGGCTCTGGTATGAATggtggggactggtgggaggtgaccggctcatgggggtggctccggcatgaatggtggggactggtgggaggtgattggctcatggggatgg--------------------------------------------------------ctcctgcatgagtgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102926842 266 - 106955855 ggtggggacaggtgggaggtgactggctcatgggggtggctccggtatgaatggtggggactggtgggaggtgactggctcatgggtgtggctctggtatgaatggtggggactggtgggaggtgactggctcatgggggtggctccggtatgaatggtggggactggtgggaggtgactggctcatgggggtggctccagtatgaatgggggggacaggtgggaggtgactggctcatgagggtggttccctccagcatgaatgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60191934 210 + 64156825 ggtgggaactgttgggaggtgattggctcatgggggtgactctggcatgcatggtGGGAACTGTTGGGAGGTGATTGGTTCATGGCAGTGGctccagtatgaatggtggggattggtgggaggtgattggttcatggcagtggctccagtatgaatggtggggactggtgggaggcgataggctcatgggggtgg--------------------------------------------------------ctccggcatgaatgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55292234 210 + 59248254 ggtggggattggtgggaggtgattggctcatggcagtggctctggtatgaatggtggggactggtgggaggtgattggctcatggaggtggctctggtatgaatggtGGGGACTGGTGGGAGGCGATAGGCTCATGGGGGTGGctccggtatgaatggtggggactggtgggaggtgattggttcatgggggtgg--------------------------------------------------------ctccggcatgaatgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47389959 158 + 51301725 ggtggggactggtgggaggtgattggttcATGGAGGTGGCTCTGGTATGAAtggtggggactggtgggaggtgattggctcatgggggtggttccGGTATGAACGGTGgagactggtg----------------------------------------------------ggaggtgattggttcATGGGGGTGG--------------------------------------------------------CTCCGGCATGAATGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47087245 210 + 50890351 ggtggggactggtgggaggtgataggctcatggtagtggctcctgcatgaatggtggggactggtgggaggcgataggctcatggaggtggctccgacatgaatggtggggactggtgggaggcgataggctcatggaggtggctctgatatgaatggtggggactggtgggaggtgattggttcatgggggtgg--------------------------------------------------------ctccggtatgaacgg i chlSab2.chr6 C 0 I 156 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 45607175 378 + 49145316 I a score=1805570.000000 s hg38.chr19_GL949747v2_alt 361981 764 + 729520 tttgtcaccatccccttcggtgctgttctcacgatagtgagtgagtcctcattagatgtggttgtttaaaagtgtatggcacctctctt----ctctctctctctct-----ccctcctgctccagccatgtaaagtgtttgctcctcctttgccttccaccatgactgaaagcctcctgaggcctccccagaagccaagcagaagccactgtgcttcctgtacagcttgcagaaccatgagccaattaaacttcttttctttgtaagtttcccagtgccaggtatttctttacagcaatacaagaacggactaat-acaGAAAATTGGCACCCAGGATGGACTAATAcactcttatgcccaaaagcgttccagaacttcccaccaaggtcatattgacaagactttgcatcttctctcccccacccacctcttggcttagcactctgattgtatctcctcccactttccccttcgtgaccctgatccagccacatggacatccttgctgttcctagaatacaccaagcatgcatctgcctcaggacctttgcatgtgccatgctttctgcctggaacactc-ttcccccagagatgcatggggctcactctctgcctccttcactcttgactccaatattcccttctccttcaggtcttcttggaccatcctatctaaagttgcaacactccctccagatttcatatcacctctcactgcctttttttctttcttcagcatatatcactaatcttgcatatattttatttatta s panTro4.chr19 59307531 762 + 63644993 tttgtcaccatcccctttggtgctgttctcacgatagtgagtgagttctcatgagatgtggttgtttaaaagtgtatggcacctctct------cctctctctctct-----ccctcctgctccagccatgtaaagtgtttgctcctcctttgccttccgccgtgactgaaagcctcctgaggcctccccagaagccgagcagaagccactgtgcttcctgtacagcttgcaggaccatgagccaattaaacttcttttctttgtaagtttcccagtgccaggtatttctttacagcaatacaagaacggactaat-acaGAAAATTGGCACCCGGGATGGACTAATAcactcttatgcccaaaagcattccaggacttcccaccaaggtcatattgacaagactttgcatcttctctcccccacccacctcttggcttagcactctgattgtatctcctcccactctccccttcgtgaccctgatccagccacatggacatccttgctgttcctagaatacaccaagcatgcatctgcctcaggacctttgcatgtgccatgctttctgcctggaacactc-ttcccccagagatgcatggggctcactctctgcctccttcactcttgactccaatattcccttctccttcaggtcttcttggaccatcctatctaaagttgcaacactccctccagatttcatatcacctctcgctgcctttttttctttcttcagcatatatcactaatcttgcatatattttatttatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56193203 761 + 60714840 tttgtcaccatcccctttggtgctgttctcatgatagtgaatgagttctcatgagatgtggttgtttaaaagtgtatggcacctctctc----ctctctctctctct-----tcctcctgctccagccatgtaaaatgcttgctcctcctttgccttctgccatgactgaaagcctcctgaggcctccccagaagcctagcagaagccactatgcttcctgtacagcttgcagaaccatgagccaattaaa---cttttctttgtaagtttcctagtgccaggtatttctttatagcaatgcaagaacggactaat-acaGAAAATTGGCACCCGGGATGGACTAACAAactcttctgcccaaaagcgttccagaacttcccaccaaggtcatattgacaagactttgcatcttctctcccccacccacctcttggcttagcgctctgattgtatctcctcccactctccccttcgtgaccctgatccagccacatggacattcttgctgttcctagaatacaccaagcatgcatctgcctcaggacctttgcacatgccatgctttctgcctggaacactc-ttcccccagagatgcatggggctcactctctgcctccttcactcttgactccaatatccccttctccttcaggccttcttggaccatcctatctaaagttgcaacactccctccagatttcatatcacctctcgctgcctttttttctttcttcagcatatatcactaatcttgcatatattttacttatta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102927108 760 - 106955855 tttgtcaccatcccccttggtgctgttctcatgatag----tgagttctcatgagatgtg---gtttaaaagtgtatggcacccctctcctctctctctctctctct-----tcctcctgctccagccatgtaaagtgcttgctcctcctttgccttccgccgtgactgaaagcctcctgaggcctccccagaagctgagcagaagccactatgcttcctgtacagcttgcagaaccaggagccaattaaacttcttttctttgtaagtttcccagtgccaggtatttctttacagcaatgcaaggacggactaat-acaGAAAATTGGCACCCGGGATGGACTAATAcactcttctgcccaaaagcgttccaggacttcccaccgaggtcatattgacaagactttgcatcttctctcttccacccacctcttggcttagtgctctgattgtatctcatcccgctctccccttcgtgaccctgatccagccacatggacatccttgctgttcctagaatacgccaagcgtgcatctgcctcaggacctttgcacttgccatgctttctgcctgg-acactc-ttcccccagagatgcatggggctcactctctgcctccttccctcttgactccaatatccccttctccttcaggccttcttggaccatcctacctaaagttgcaacactccctccagatttcatatcacatctcactgcctttttttctttcttcatcatatatcactaatcttgcatatattttacttatta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60192144 765 + 64156825 tttgtcaccatcccccttggtgctgttctcctgatagcgagtgagttctcatgagatgtggttgtttaaaagtgtatagcacccctctc----ctctctctctccct-----tcctccagctccagccatgtgaagtgcttgctcctcctttgccctccgcggtgacggaaggcctcctgaggcctccccagaagccgggcagaagccactatgcttcctgtacagcctgcagaaccatgagccaattaaacttcttttctttgtaagtttcccagtgccaggtatttctttacagcgatgcaagaacggactaataACAGAAAATTGGCACCCGGGATGGACTAACAcgctcctctgcccaaaagcattccaggacttcccatctcggtcatactgacaagactttgcatcttctctcccccacccacctcttggcttagtgctctgattgtatctccccctactctccccttcgcgatgctgatccagccacatggacatccttgctgttcctagaatactccaagcatgcatctgcctcaggacctttgcacgtgccatgctttctgcccggaacactctttcccccagagatgcatgggactcactttccgcctccttcactcttgactccaatatccctttctccttcaggccttcttggaccatcctatctaaagttgcaacactccctccagattttatatcacctctggctgcc-ttttttctttcttcagcatatatcactaatcttgcatatattttacttacta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55292444 765 + 59248254 tttgtcaccatcccccttggtgctgttctcatgatagcgagtgagttctcacgagatgtggttgtttaaaagtgtatggcacccctctc----ctctctctctccct-----tcctccagctccagccatgtgaagtgcttgctcctcctttgccctccgcggtgacggaaggcctcctgaggcctccccagaagccgggcagaagccactatgcttcctgtacagcctgcagaaccatgagccaattaaacttcttttctttgtgagtttcccagtgccaggtatttctttacagcgatgcaagaacggactaataACAGAAAATTGGCACCCGGGATGGACTAACAcgctcctctgcccaaaagcattccaggacttcccatctcggtcatactgacaagactttgcatcttctctcccccacccacctcttggcttagtgctctgattgtatctccccctactctccccttcgcgatgctgatccagccacatggacatccttgctgttcctagaatactccaagcatgcatctgcctcaggacctttgcacgtgccatgctttctgcccggaacactctttcccccagagatgcatgggactcactttccgcctccttcactcttgactccaatatccctttctccttcaggccttcttggaccatcctatctaaagttgcaacactccctccagattttatatcacctctggctgcc-ttttttctttcttcagcatatatcactaatcttgcatatattttacttacta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47390117 768 + 51301725 TTTGtcaccatcccccttggtgctgttctcatgatagcgagtgagttctcatgagatgtggttgtttaaaagtgtatggcacccctctc----ctctctctctctctctctctcctcctgctccagccatgtgaagtgcttGCTCCTCCTTTGCCCTCCGCGGTGACTGAAggcctcctgaggcctccccagaagccagaCAGAAGctactatgcttcctgtatagcctgcagaaccatgagccaattaaacttcttttctttgtgagTTTCCCAgtgccaggtatttctttacagcgaTACAAGAAcggactaac-acagaaaattggcaCCCGGGATGGACTAACACGCTCCTCTGCCCAAAAGCATTCCAGGACTTCCCACCTCGGTCATACTGACAAGACTTTGCATCTTCTCTCCCCCACCCATCTCTTGGCTTAGTGCTCTGATTGTATCTCCCCCCACTCTCCCCTTCGCGACGCTGATCCAGCCACATGGATATCCTTG-TGTTCCTAGAATACACCTAGCATGCatctgcctcaggacctttgcacgtGCCATGCTTTCTGCCCGGAACACTCTTTCCCCCAGAGATGCATGGGACTCACTTTCCGCCTCCTTCACTCTTGACTCCAATATCCCTTTCTCCTTCAGGCCTTCTTGGACCATCCTATCTAAAGTTGCAACACGCCCTCCAGATTTTATATCACCTCTggctgcc-ttttttctttcttcagcatATATCACTAATCTTGCATATATTTTACTTACTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47087611 760 + 50890351 tttgtcaccatcccccttggtgctgttctcatgat----agtgagttctcgtgagatatggttgtttaaaagtgtatggcacccctctc----ctctctctctctcc-----tcctccagctccagccatgtaaagtgcttgctcctcctttgccttccgcggtgactgaaggcctcctgaggcctcctgagaagctggacagaagccactatgcttcctgtacagcctgcagaaccatgagccaattaaacttcttttctttgtgagtttcctagtgccaggtatttctttacagcgatgcaagaatggactaat-acaGAAAATTGACACCCGGGATGGACTAACAcattcctctggccaaaagcattccaggacttcccacctcggtcatactgacaagactttgcatcttctctcccccatccacctcttggcttagtgctctgattgtatctccccctactctccccttcacgacgctgatccagccacatggacatccttgctgttcctagaatactccaagcatgcatctgcctcaggacctttgcacgtgccatgctttctgcccggaacactctttcccccagagatgcatgggactcactttccgcctccttcactcctgactccaatatccctttctccttcaggccttcttggaccatcctatctaaagttgcaacactccctccagattttatattacctcttgctacc-tttttcctttcttcagcatatatcactaatcttacatatcttttacttacta i chlSab2.chr6 I 156 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 45607175 378 + 49145316 I a score=856347.000000 s hg38.chr19_GL949747v2_alt 362745 320 + 729520 atattgtttatgatctgcccccccattagaatatatctccatgaagtcatagatgttttttctgcagtgtttcctatagtgtccctgcaccta-ggacagtccctggcacacaatagatactcaataaatttttttgaatgaatATTTGTTGAGTATCTAAAATCTCTAAACTTATGAATGAATAGACATATACAGTATATAGGAAGTATAAGGAAGGCTACAAGGGCAtgattactgagtacaattctagaagccagatctctagcttttaattatggttgtaccagttataagctttgtgactttagagtaagtttatt s panTro4.chr19 59308293 320 + 63644993 atattgtttatgatctgcctccccattagaatatatctccatgaagtcatagatgttttttctgcagtgtttcctgtagtgtccctgcaccta-ggacagtccctggcacacaatagatactcaataaatttttttgaatgaatATTTGTTGAGTATCTAAAATCTCTAAACTTATGAATGAATAGACATATACAGTATATAGGAAGTATAAGGAAGGCTACAAGGGCAtgattactgagtacaattctagaagccagatctctagcttttaattatggttgtaccagttataagctttgtgactttagagtaagtttatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56193964 316 + 60714840 atattgtttatgatctgcctccccactagaatatatccccatgaagtcatagattttttttctgcagtgtttcctatagtgtccctgcaccta-agacagtccctggcacacaatagatactcaataaatttttttgaatgaatATTTGTTGAGTATCTAAAATCTCTAAACTTATGAATGAATAGACATATACAGTATATAGGAAGTATAAGGAAGGCTACAAGGGCAtgattactgagtacaattctagaagccagatct----cttttaattatggttgtaccagttataagctttgtgactttagagtaagtttatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102927868 320 - 106955855 atattgtttatgatctgcctccccactagaatatatcctcatgaagtcatagattttttttctgcagtgtttcctatagtgtccctgcaccta-ggacagtccctggcacataatagatactcaataaatttttttgaatgaatATTTGTTGAGTATCTAAAATCTCTAAACTTATGAATGAATAGACATATACAGTATATAGGAAGTATAAGGAAGGCTACAAGGGTAtggttactgagtacaattctagaagccagatctctagcatttaattacggttgtaccagttataagctttgtgactttagagtaagtttatt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60192909 319 + 64156825 atattgtttatgatctgcctccccactagaatatatccccatgaagtcatagat-ttttttctgcggtgtttcctatagtgtccctgtaccta-ggacagtccctggcacataatacatactcaataaatttttttgaatgaatATTTGTTGAGTATCTAAAACCTGGAAACTTATGAATGGATAGACATACACAGTATATAGGAAGTATAAGGAAAGCTACACGGGCAtgattactgagtacaattccagaagccagatctctagcttttaattatggttgtaccagttagaagctttgtgactttagactaagtttatt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55293209 319 + 59248254 atattgtttatgatctgcctccccactagaatatatccccatgaagtcatagat-ttttttctgcggtgtttcctatagtgtccctgtaccta-ggacagtccctggcacataatacatactcaataaatttttttgaatgaatATTTGTTGAGTATCTAAAACCTGGAAACTTATGAATGGATAGACATACACAGTATATAGGAAGTATAAGGAAAGCTACACGGGCAtgattactgagtacaattccagaagccagatctctagcttttaattatggttgtaccagttagaagctttgtgactttagactaagtttatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47390885 319 + 51301725 ATATTGTTTATGATCTGCCTCCCCACTAGAATATATCCCCATGAAGTCATAGAt-ttttttCTGCGGTGTTTCCTATAGTGTCCCTGTACCTA-GGACAGTCCCTGGCACATAATAcatactcaataaatttttttgaatgaatatttgttgagtatctaAAACCTCGAAACTTATGAATGGATAGACATACACAGTATATAGGAAGTATAAGGAAAGCTACACGGGCATGATTACTGAGTACAATTCCAGAAGCCAGATCTCTAGCTTTTAATTATGGTTGTACCAGTTAGAAGCTTTGTGACTTTAGACTAAGTTTATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47088371 319 + 50890351 atattgtttatgatctgccttctcactagaatatatccccatgaagtcacagat-ttttttctgcagtgtttcctctagtgtccctgcacctagggacagtccctggcacataatacatactcaataaatttttttgaatgaatATTTGTTGAGTATCTAAAACCTCGAAACTTATGAATGG-TAGACATACACAGTATACAGGAAGTATAAGGAAAGTTACACGGGCAtgattactgaatacaatttcagaagccagatctctagcttttaattatggttgtaccagttagaagttttgtgactttagactaagtttatt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3408922 263 - 49145316 acattgtttgctgcctgcctccccactacaatcaat-tccattaagccacagaa-gtttttctgcactgtttcctgtagtgtccctacgccca-gaacacaccctggcacacagcacat----aagaaatattttagagtgaatg-----------------------------aCGAATGCATAGACGCAGACAGCATATAGGAAGGATGAGGAGAGTTATCTGTGCAGGATTACCGAGTACAATTCCAGAGGTCACATCTCT----------------------ATTTATAAGCTCTGTCACCTTAAACTAAGGttatt i calJac3.chr22 I 2397 I 145 e canFam3.chr1 19785924 401 - 122678785 I a score=92821.000000 s hg38.chr19_GL949747v2_alt 363065 36 + 729520 aacctctctgttcctctacttcttcctctgtaaaaa s panTro4.chr19 59308613 36 + 63644993 aacctctctgttcctctacttcttcctctgtaaaaA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56194280 36 + 60714840 aacctctctgttcctctacttcttcctctgtaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102928188 36 - 106955855 aacccctctgttcctctacttcttcctctgtaaaaA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60193228 36 + 64156825 aacctctttgttcctctacttcttcctctgtaaaaa i rheMac3.chr19 C 0 I 1557 s macFas5.chr19 55293528 36 + 59248254 aacctctttgttcctctacttcttcctctgtaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47391204 36 + 51301725 AACCTCTCTGTTCCTCtacttcttcctctgtaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47088690 36 + 50890351 aacctctctgttcctctacttcttcctctgtaaaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 3409185 145 - 49145316 I a score=627.000000 s hg38.chr19_GL949747v2_alt 363101 1 + 729520 a s panTro4.chr19 59308649 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56194316 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102928224 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55293564 1 + 59248254 t i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47391240 1 + 51301725 a i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47088726 1 + 50890351 a i chlSab2.chr6 C 0 I 1951 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 3409185 145 - 49145316 I e rheMac3.chr19 60193264 1557 + 64156825 I a score=10280.000000 s hg38.chr19_GL949747v2_alt 363102 9 + 729520 aatttttca s panTro4.chr19 59308650 9 + 63644993 AATTTTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56194317 9 + 60714840 aatttttca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102928225 9 - 106955855 AATTTTTCA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55293565 9 + 59248254 tttttttca i macFas5.chr19 C 0 I 434 s papAnu2.chr19 47391241 9 + 51301725 aatttttca i papAnu2.chr19 C 0 I 770 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 3409185 145 - 49145316 I e chlSab2.chr6 47088727 1951 + 50890351 I e rheMac3.chr19 60193264 1557 + 64156825 I a score=14780.000000 s hg38.chr19_GL949747v2_alt 363111 19 + 729520 gccgggcaaggtggctcac s panTro4.chr19 59308659 19 + 63644993 gccgggcacggtggctcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56194326 19 + 60714840 gcagggcacggtggctcac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102928234 19 - 106955855 gccgggcgcggtggctcaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3840093 19 - 59248254 gctgggcacggtggctcat i macFas5.chr19 I 3121 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 3409185 145 - 49145316 I e chlSab2.chr6 47088727 1951 + 50890351 I e papAnu2.chr19 47391250 770 + 51301725 I e rheMac3.chr19 60193264 1557 + 64156825 I a score=42720.000000 s hg38.chr19_GL949747v2_alt 363130 91 + 729520 gcctgtaatcccagcactttgggaggccgaggcgggcggatcac--gaggtcaggagatcgaggccatcctggctaacacggtgaaaccccgt s ponAbe2.chr19 56194345 91 + 60714840 gcctgtaatcccagcactttgggaggccgaggcgggcggatcac--gaggtcaggagatcaagaccatcctggctaacacggtgaaaccccgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102928253 91 - 106955855 gcctgtaatcccagcactgtgggaggctgaggtgggcggatcac--gaggtcaggagatcaagaccaccctggctaacatggtgaaaccccgt i nomLeu3.chr10 C 0 M 838 s macFas5.chr19 3840112 93 - 59248254 gtctgtaatcccagcactttgggaggctgaagcgggcagattacctgaggacaggagttcgaaaccagcctggccaacgtggtgaaatcccat i macFas5.chr19 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 3409185 145 - 49145316 I e chlSab2.chr6 47088727 1951 + 50890351 I e papAnu2.chr19 47391250 770 + 51301725 I e rheMac3.chr19 60193264 1557 + 64156825 I e panTro4.chr19 59308678 0 + 63644993 C a score=41331.000000 s hg38.chr19_GL949747v2_alt 363221 203 + 729520 ctgtactaaaaatacaaaaaattagccgggcgtggttgcgcaagcctgtagttccagctactcgggaggctgaggcaggacaatggcgtgaacccgggaggtggagcttgtagtgagctgagatcgcgccactgcactccagcctgggcgacagagcaagactccgtctcaaaaaaaaaaaaaaaaaaaaaaata------caaagtaa s ponAbe2.chr19 56194436 209 + 60714840 ctttactaaaaatacaaaaaattagctgggcgtagtggcgggcacctgtagtcccagctactccggaggctgaggcaggagaacggcgtgaacccaggaggcggagcttgcagtgagccgagatagcgccactgctctccagcctgggtgacagagcgaaactcagtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaattcaaagtaa i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3840205 203 - 59248254 ctctactaaaaatacaaaaaattagccaggtgtggtggcgcacacctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacacaggagatagaggttgcagtgagccgagactgcaccaccatactccaccctgggcaacagagcaagactctgtcaaaaaaaaagaaaaaaaaaaagaaaag------aaaaGAaa i macFas5.chr19 C 0 I 124 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 3409185 145 - 49145316 I e nomLeu3.chr10 102928344 838 - 106955855 M e chlSab2.chr6 47088727 1951 + 50890351 I e papAnu2.chr19 47391250 770 + 51301725 I e rheMac3.chr19 60193264 1557 + 64156825 I e panTro4.chr19 59308678 0 + 63644993 C a score=36402.000000 s hg38.chr19_GL949747v2_alt 363424 421 + 729520 ttgtacagaactcataaaatttttgtgactattcggtgagttattatgttaaaagtaatcagaTaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagctgagatcacgccactgcactccagcctgggtgacagagcaagactccgtcaaaaaaaaaaaaaaaaaaaaaaaa--ttacgtaacggatacaatgtatgtcactgggttagtggatccctgaaagccctaacttcatcattctggaatctatccatgcaacaaagttacactcgtaccccataaacgtatacaaataaaaaaTAATCggctgcgcatggtggtttacagctgtaatcccagcactttgggaggctgaggagggcggatcacctgaggtcgggggtttgagaccagcctgaccaacag s ponAbe2.chr19 56194645 423 + 60714840 tggtatagaactcataaaatttttgtgactattcggtgagttattatgttaaaAATAAACAGATTggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcacaccactgcactccagcctgggtgacagagcgagactccgtcaaaaaaaaaaaaaaaaaaaaaaaaaattacctaacggatacaatgtatgtcactgggttaatggatccctgaaagccctaacttcatcattttggaatctatccatgcaacaaagttacactcgtaccccataaatgtatacaaataaaaaaTAATCTgctgggcatggtggcttacagctctaatcctagcactttgggaggccgaggagggaggatcacctgaggtcgggggtttgagaccagcctgaccaacag i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 3409185 145 - 49145316 I e nomLeu3.chr10 102928344 838 - 106955855 M e chlSab2.chr6 47088727 1951 + 50890351 I e papAnu2.chr19 47391250 770 + 51301725 I e macFas5.chr19 3840408 124 - 59248254 I e rheMac3.chr19 60193264 1557 + 64156825 I e panTro4.chr19 59308678 0 + 63644993 C a score=47930.000000 s hg38.chr19_GL949747v2_alt 363845 178 + 729520 ggagaaaccctgcctctactaaaaatacaaaattagctgggcgtggtagcacatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagcagagatcaaaccattgcactccagcctgggcaacgagagcaaaactcca s ponAbe2.chr19 56195068 178 + 60714840 ggagaaaccccgtctctactaaaaatacaaaattagctgggtgtggtggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagcagagatcacaccattgcactccagcctgggcaacaagagcgaaactcca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102929183 178 - 106955855 ggagaaacctcgtctctactaaaaatacgaaattagctgggcgtggtggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccgggaggcagagattgcagtgagcagagatcacaccattgcactccagcctgggcaacaagagtgaaactcca i nomLeu3.chr10 M 838 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 3409185 145 - 49145316 I e chlSab2.chr6 47088727 1951 + 50890351 I e papAnu2.chr19 47391250 770 + 51301725 I e macFas5.chr19 3840408 124 - 59248254 I e rheMac3.chr19 60193264 1557 + 64156825 I e panTro4.chr19 59308678 0 + 63644993 C a score=47020.000000 s hg38.chr19_GL949747v2_alt 364023 122 + 729520 tctcaaaaaataaTCATAATCATAATCATAAATATAAGGCAAAAGTAAGCATGCTTTCTTTAAA---AAAAGTAGTCAGACTGAGCCTGTCATCTGGTAAGAGCTCTAACGTttatcgttaatat s ponAbe2.chr19 56195246 122 + 60714840 tctcaaaaaataaTCATAATCATAATCATAAATATAAGGCAAAAGTAAGCATGCTTTCTTTAAA---AAAAGCAGTCAGACTGAGCCTGTCATCTGGTAAGAGCTCTAATGTttattgttaatat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102929361 122 - 106955855 tctcaaaaaGTAATCATAGTCATAATCATAAATATAAGGCAAAAGTAAGCATGCTTTCTTTAAA---AAAAGTAGTCCGACTGAGCCTGCCATCTGGTAAGAACTCtaatgtttactgttaatgt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3840532 110 - 59248254 ttttaaaaaaTAG--------------AAAAATGAAAGGCAAAAGTAAGCATGCTTTCTTAAAAATGAAAAGTAGTCAGACTGAGCCTGACAT-TACTAAGGGTTCTAATATTGAttattgttat i macFas5.chr19 I 124 I 1477 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 3409185 145 - 49145316 I e chlSab2.chr6 47088727 1951 + 50890351 I e papAnu2.chr19 47391250 770 + 51301725 I e rheMac3.chr19 60193264 1557 + 64156825 I e panTro4.chr19 59308678 0 + 63644993 C a score=44106.000000 s hg38.chr19_GL949747v2_alt 364145 168 + 729520 gattgttattgtcgctgttatattttcattattggtgttgtca------ttatatgtacaaaacagcatcagcagagaatccacatccttttcaagaacaaatgaagcatttacaaaaattgatgacttattaatccacccaggaagtctcaaaatcttccaaaaacttcatat s ponAbe2.chr19 56195368 174 + 60714840 gattgttattatcactgttatattttcattattggtgttgtcattatatttatatatacaaaacagtatcaacagagaatccacatccttttcaagaacaaatgaagcatttacaaaaattgatgacttattaatccacccaggaagtctcaaaatcttccaaagacttcatat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102929483 174 - 106955855 gattgttattattgctgttatattttcatTATTGGTGTTGTCATTATatttatatgtacaaaacagcatcaacagagaatccacatctttttcaagaacaaatgaagcattcacaaaaattgatgacttattaatccacccaggaagcctcaaaatcttccaaagacttcatat i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 3409185 145 - 49145316 I e chlSab2.chr6 47088727 1951 + 50890351 I e papAnu2.chr19 47391250 770 + 51301725 I e macFas5.chr19 3840642 1477 - 59248254 I e rheMac3.chr19 60193264 1557 + 64156825 I e panTro4.chr19 59308678 0 + 63644993 C a score=11421.000000 s hg38.chr19_GL949747v2_alt 364313 32 + 729520 aatacaaaCCATgactgggcacagtggctcat s ponAbe2.chr19 56195542 32 + 60714840 aatacaaacgatgactgggagcagtggctcat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102929657 32 - 106955855 aatacaaaCCATgactgggagcagtggctcac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55294008 31 + 59248254 aatacaaaaT-TAgctgggcgtggtggcacat i macFas5.chr19 I 434 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 3409185 145 - 49145316 I e chlSab2.chr6 47088727 1951 + 50890351 I e papAnu2.chr19 47391250 770 + 51301725 I e rheMac3.chr19 60193264 1557 + 64156825 I e panTro4.chr19 59308678 0 + 63644993 C a score=219811.000000 s hg38.chr19_GL949747v2_alt 364345 266 + 729520 gcctgtaatcccagcactttgggagaccgaggagggcggatcacctgaggtcaggagttcgagaccagcctggccaacat--ggcaaaaccccgtctctactaaaaacacaaaattagccgggcgtagtggtgcatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaactcgggaggtggaggttgcagtgagccgagattgtgccattgcgctccagcctgggcaacaagagcaaaacttcgtctcaaaa s panTro4.chr19 59308678 266 + 63644993 gcctgtaaccccagcactttgggagaccgaggagggtggatcacctgaggtcaggagttcgagaccagcctggccaacat--ggcaaaacctcgtctctactaaaaacacaaaattagccgggcgtagtggtgcatgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaactcgggaggtggaggttgcagtgagccaagattgtgccattgcactccagcctgggcaacaagagcaaaactccgtctcaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56195574 266 + 60714840 gcctgtaatcacagcactttgggaggccgaggagggcggatcacctgaagtcaggagcttgagaccagcctggccaacat--ggcgaaaccccatctctactaaaaatacaaaattagccgggcgtagtggggcatgcctgtaatcccagctactcgggagactgaagcaggagaattgcttgaactcaagaggtggaggtggcagtgaggcgagattgcaccattgcgctccagcctgggcaacaagagcgaaactccatctcaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102929689 266 - 106955855 gcctgtaatcccagcactttgggagaccgaggagggcggatgacctgaggtcaggagttcgagaccagcctggccaacat--ggcgaaaccccatctctactaaaaatacaaaattagccgggtgtagtggtgcatgcctgtaatcccagctactcgagaggctaaggcaggagaattgcttgaagtagggagatggaggttgcagtgagccgagattgtgccattgcactccagcctgggcaacaagagcgaaactccatttcaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55294039 265 + 59248254 gcctgcaatcccagcattttgggaggccgaggagggcggatcacctgaggtccggagttagagaccagcctggccaacattcggagaaaccctgtctctaccgaaaatacaaaattagccgtgtgtggtggtgcatgcctgtaatcccag---cttgggaggctgaggcaggagaattgcttgaactcgggaggtggaggttgcagtgagccgagattacaccactgcactccagcctgggcaacaagagtgaaactccatctcaaaa i macFas5.chr19 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 3409185 145 - 49145316 I e chlSab2.chr6 47088727 1951 + 50890351 I e papAnu2.chr19 47391250 770 + 51301725 I e rheMac3.chr19 60193264 1557 + 64156825 I a score=13559.000000 s hg38.chr19_GL949747v2_alt 364611 21 + 729520 aaaaaaaaaaaaaaaaaaaaa s panTro4.chr19 59308944 13 + 63644993 aaaaaaaaaaaaa-------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56195840 13 + 60714840 aaaaaaaaaaaaa-------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102929955 13 - 106955855 aaaaaaaaagaaa-------- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55294304 21 + 59248254 aaaaaaaaaaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47090678 21 + 50890351 aaaaaaaaaaaaaaaaaaaaa i chlSab2.chr6 I 1951 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 3409185 145 - 49145316 I e papAnu2.chr19 47391250 770 + 51301725 I e rheMac3.chr19 60193264 1557 + 64156825 I a score=39341.000000 s hg38.chr19_GL949747v2_alt 364632 48 + 729520 aaaagaaaaaagaaaagaaaagaaaaagaaaagaaaaaaaa-----gaaaTAC s panTro4.chr19 59308957 39 + 63644993 -----------gaaaagaaaagaaaaagaaaagaaaaaaaa---aagaaaTAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56195853 24 + 60714840 -------------------------aagaaaagaataaaaa----agaaatac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102929968 44 - 106955855 ---------aagaaaagaaaagaaaaaggaaagaaaaaaaaaaaaagaaaTAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60194821 51 + 64156825 aaaaaaaaaaagaaaagaaaagaaaaagaaagaaaaaaaag--aaagaaaTAC i rheMac3.chr19 I 1557 C 0 s macFas5.chr19 55294325 39 + 59248254 ------------aaaaaaaaagaaaaagaaagaaaaaaaag--aaagaaatac i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47090699 46 + 50890351 -----aaaaaaaaaaagaaaaaaagaaaagaaaaaaaaaat--aaagaaatac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 3409185 145 - 49145316 I e papAnu2.chr19 47391250 770 + 51301725 I a score=96280.000000 s hg38.chr19_GL949747v2_alt 364680 45 + 729520 AGACCATATTCTGTGACTACA-AATTtatgtaaaagattaaatatt s panTro4.chr19 59308996 45 + 63644993 AGACCATATTCTGTGACGACA-AATTTATGtaaaagattaaatatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56195877 45 + 60714840 agaccatattctgtgactaca-aatttatgtaaaagattaaatatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102930012 45 - 106955855 AGACCATATTCTGGGACTACA-AATTTATGTAAAAGATTAAATATT i nomLeu3.chr10 C 0 I 299 s rheMac3.chr19 60194872 45 + 64156825 AGACCATATTCTGTGACTACA-AATTTTTGTaaaagattaaatatt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55294364 45 + 59248254 agaCCATATTCTGTGACTACA-AATTTTTGtaaaagattaaatatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3805735 46 - 51301725 AAACCACATTTTGTGACTACAGAAATTACATAAGAGACCaaaaatt i papAnu2.chr19 I 2461 C 0 s chlSab2.chr6 47090745 45 + 50890351 agaccatattctatggctaca-aatttatataaaagattaaatatt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 3409185 145 - 49145316 I a score=32511.000000 s hg38.chr19_GL949747v2_alt 364725 18 + 729520 aaaaga-tttaaaaataca s panTro4.chr19 59309041 18 + 63644993 aaaaga-tttaaagataca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56195922 18 + 60714840 aaaaga-ttttaaaataca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102930356 18 - 106955855 aaaaGA-TTTTAAAATACA i nomLeu3.chr10 I 299 C 0 s rheMac3.chr19 60194917 19 + 64156825 aaaagattttaaaaataca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55294409 18 + 59248254 aaaaga-tttaaaaataca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3805781 18 - 51301725 aaacgt-ttaaaaaacaca i papAnu2.chr19 C 0 I 1070 s chlSab2.chr6 47090790 18 + 50890351 aaaata-ttttaaaataca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 3409185 145 - 49145316 I a score=154398.000000 s hg38.chr19_GL949747v2_alt 364743 68 + 729520 tttttaaaactaaaaatTCAGTACAACTTATGAGTTCAGACTTAAAAAACACAGGAGACATAAAATAT s panTro4.chr19 59309059 68 + 63644993 tttttaaaactaaaaattcagtacaacttacgagttcagacttaaaaaacacaggagatataaaatat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56195940 68 + 60714840 tttttaaaactaaaaattcagtacaatttatgagttcaggcttaaaaaacacataagatataaaatgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102930374 68 - 106955855 TTTTTAAAACTAAAAATTCAGTACAACTTATGAGTTCAGACTTAAAAAACACAGGAGATATAAAATAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60194936 66 + 64156825 tttttaaaactaaaaattcagtataacttatgagttcagacttaacaaacacaggagac--aaaatat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55294427 66 + 59248254 tttttaaaactaaaaatTCAGTATAACTTATGAGTTCAGACTTAAAAAACACAGGAGAC--AAAATAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47392020 66 + 51301725 tttttaaaactaaaaattcagtATAACTTATGAGTTCAGACTTAAAAAACACAggagat--aaaatat i papAnu2.chr19 I 770 C 0 s chlSab2.chr6 47090808 66 + 50890351 tttttaaaactaaaaattcagtataacttatgagttcagacttaaaaaACACAGGAGAT--AAAATAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 3409185 145 - 49145316 I a score=238953.000000 s hg38.chr19_GL949747v2_alt 364811 103 + 729520 TTAGAAATGAGCAGAGACAGTGATTCATATCGAAACTTGCTGAATGCAATAAAAGTCCTACTTAGGGGAAAATGT--------------ACACTTTTTT------TTTTTTTTTAGAAAACAC s panTro4.chr19 59309127 101 + 63644993 ttagaaatgagcagagacagtgattcatatcgaaacttgctgaatgcaataaaagtcctacttaggggaaaatgt--------------acactttttt------ttttttt--agaaaacac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56196008 102 + 60714840 ttagaaatgagcagagacagtgattcatgtcgaaacttgctgaatgcaataaaagtcctacttagaggaaaatgt--------------acacttttct------ttttttt-tagaaaacaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102930442 101 - 106955855 TCAGAAATGAGCAGAGACAGTGATTCATATCGAAACTTGCTGAATGCAATAAAAGTCCTACTTAGAGGAAAATGT--------------ACACTTTTTT------TTTTTTT--AGAAAACAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60195002 101 + 64156825 ttagaaatgaacagagacagtgattcataccgaaacttgctgaatgcagtagaagtcata-ttagaggaaaatgt--------------acactttttt------ttttttt-tagaaaacat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55294493 101 + 59248254 TTAGAAATGAACAGAGACAGTGATTCATACCGAAACTTGCTGAATGCAGTAGAAGTCATA-TTAGAGGAAAATGT--------------ACACTTTTTT------TTTTTTT-TAGAAAACAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47392086 101 + 51301725 ttagaaatgaacaGAGACAGTGATTCATACCGAAACTTGCTGAATGCAGTAGAAGTCATA-TTAGAGGAAAAtgt--------------acacttttta------atttttt-tagaaaacat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47090874 99 + 50890351 TTAGAAATGAACAGAGACAGTGATTCATACCGAAACTTGCTGAATGCAGTAGAAGTCATA-TTAGAGTGAAGTGT--------------ACACTTTTT--------TTTTTT-TAGAAAACAT i chlSab2.chr6 C 0 I 35 s calJac3.chr22 3409330 113 - 49145316 TTAGAAATGAACAGAGAATGTTACTCAT--CAAAACT---TAGATGCAATAAAAATCACA--CAGAGTGAAACGTGTATAGTTTCAAGCACACTTTTTTAAGAAATTTTTTT-TAGAAACT-- i calJac3.chr22 I 145 C 0 e canFam3.chr1 19785924 401 - 122678785 I a score=84819.000000 s hg38.chr19_GL949747v2_alt 364914 35 + 729520 GAAGTTTGGGAAATTACTTACTGAGCATGCAACTT s panTro4.chr19 59309228 35 + 63644993 gaagtttgggaaattacttactgagcatgcaactt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56196110 35 + 60714840 gaagtttgggaaattacttactgagcatgcaactt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102930543 35 - 106955855 GAAGTTTGGGAAATTACTTACTGAGCATGCAACTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60195103 35 + 64156825 gaagtttgggaaattacttactgagcatgcaactt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55294594 35 + 59248254 GAAGTTTGGGAAATTACTTACTGAGCATGCAACTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47392187 35 + 51301725 gaaGTTTGGGAAATTACTTACTGAGCATGCAACTT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 3409443 35 - 49145316 GAGGTGTGGGAAATTAATCACTGAGCATGCTTCTT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e chlSab2.chr6 47090973 35 + 50890351 I a score=199270.000000 s hg38.chr19_GL949747v2_alt 364949 85 + 729520 GTGGAGCTGGAAGGAGAAAGGAAGTCAAGGGGAGGTGCAGGAAGG--GTCCAGAAAAGCAGCAAACACAAGGTTAACAGAAGAAATG s panTro4.chr19 59309263 84 + 63644993 gtggagctggaaggagaaaggaagtcaaGGGGAGGTGC-GGAAGG--GTCCAGAAAAGCGGCAAACACAAGGGTAACAGAAGAAATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56196145 85 + 60714840 gtagagctggaaggagaaaagaagtcaaggggaggggcgggaagg--GTCCAGAAAAGCAGTGAACACAAGGGTAATAGAAGAAATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102930578 84 - 106955855 GTGGAGCTGGAAGGAGAAA-GAAGTCAAGGGGAGGGGCGGGAAGG--GACCAGAAAAGCAGTGACCACAAGGGTAATAGAAGAAATG i nomLeu3.chr10 C 0 I 100 s rheMac3.chr19 60195138 85 + 64156825 gtggaactggaaggagaaaagAAGTCGAGGGGAGGGGCTGGAAAG--GTCCAGAAAAGCAGTGAACACAAGGGTAATAGAAGAAATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55294629 85 + 59248254 GTGGAACTGGAAGGAGAAAAGAAGTCGAGGGGAGGGGCTGGAAAG--GTCCAGAAAAGCAGTGAACACAAGGGTAATAGAAGAAATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47392222 85 + 51301725 GTGGAactggaaggagaaaagaagtctAGGCGAGGGGCCGGAAGG--GTCCAGAAAAGCAGTGAACACAAGGGTAATAGAAGAAACG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47091008 85 + 50890351 GTGGAACTGGAAGGAGAAAAGAAGTCTAGGGGAGGGGCTGGAAAG--GTCCAGAAAAGCAGTGAACACAAGGGTAATAGAAGAAATG i chlSab2.chr6 I 35 C 0 s calJac3.chr22 3409478 81 - 49145316 GAGGAGCCGGAGTGAAAACAGGAAGGGCAGCGAGGA---GGAAGGCAGCCCAG-CCAGCAGGGAC--CGAGGGAAACTGAGGCAGTG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I a score=260135.000000 s hg38.chr19_GL949747v2_alt 365034 115 + 729520 CCCCAGTAAGTGCCCAAGGAACTCACCCAGGTGCATTGTCACGACGCTTTCAG-AAACAAAAGAAAAAGAAAATAAACATATTC---T---AGGTGAGAGAAAACAGACAACTGTGCACTAA s panTro4.chr19 59309347 115 + 63644993 CCCCAGTAAGTGCCCAAGGAACTCACCCAGGTGCATTGTCACGACGCTTTCAG-AAACAAAAGAAAAAGAAAATAAACATATTC---T---AGGTGAGAGAAAACAGACAACTGTGCACTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56196230 116 + 60714840 CCCCACTAAGTGCCCAAGGAACTcaccaaggtgcattgtcatgatgctttcagaaaacaaaagaaaaagaaaataaacatatcc---t---aggtgagagaaaacagacaactgtgcactaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3940358 103 + 106955855 CCTCCCTAAGGGCTCACCGCACTCACCAAGCTGCATTATc----------------tcaaaggaaaaagaaaataaagaaaact---tcaaaggtgggagaaaaaacaccatggtgtaccaa i nomLeu3.chr10 I 5581 C 0 s rheMac3.chr19 60195223 116 + 64156825 CCCCGCTAAGTGCCCAaggcactcaccaaggtgcattatcacgacacttttagaaaacaaaagaaaaagaaaataaacatattc---t---aggtgagaaaaagcagacaattgtgcactaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55294714 116 + 59248254 CCCCGCTAAGTGCCCAaggcactcaccaaggtgcattatcacgacacttttagaaaacaaaagaaaaagaaaataaacatattc---t---aggtgagaaaaagcagacaattgtgcactaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47392307 116 + 51301725 CCCCGCTAAGTGCCCAAGGCACTCACCAAGGTGCATTATCACGacacttttagaaaacaaaagaaaaagaaaataaacatattc---t---aGGTGAGAAAAAGCAGACAATTGTGCACTAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47091093 116 + 50890351 CCCCGCTAAGTGCCCAaggccctcaccaaggtgcattatcacgacacttttagaaaacaaaagaaaaataaaataaacatattc---t---aggtcagaaaaaacagacaactgtgcactaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3409559 103 - 49145316 TCTCACTCAGGGCCCACAGCACTCACCAAGCTGCATTATC----------------CAAAAGGAAAAAGAAAATCAAGAAGACTGTGT---AGGTGagagaaaaaagacagctgtgtactaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I a score=11633.000000 s hg38.chr19_GL949747v2_alt 365149 9 + 729520 GTTTCTAtt s panTro4.chr19 59309462 9 + 63644993 GTTTCTAtt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60195339 9 + 64156825 gtttccatt i rheMac3.chr19 C 0 I 2131 s macFas5.chr19 55294830 9 + 59248254 gtttccatt i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47392423 9 + 51301725 GTTTCCATT i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47091209 9 + 50890351 gtttccatt i chlSab2.chr6 C 0 T 2158 e canFam3.chr1 19785924 401 - 122678785 I e ponAbe2.chr19 56196346 0 + 60714840 C e calJac3.chr22 3409662 0 - 49145316 C e nomLeu3.chr10 3940461 0 + 106955855 C a score=1063.000000 s hg38.chr19_GL949747v2_alt 365158 3 + 729520 ttt s panTro4.chr19 59309471 3 + 63644993 ttt i panTro4.chr19 C 0 C 0 s macFas5.chr19 55294840 2 + 59248254 -tt i macFas5.chr19 I 1 I 730 s papAnu2.chr19 47392433 2 + 51301725 -TT i papAnu2.chr19 I 1 I 240 e canFam3.chr1 19785924 401 - 122678785 I e ponAbe2.chr19 56196346 0 + 60714840 C e calJac3.chr22 3409662 0 - 49145316 C e nomLeu3.chr10 3940461 0 + 106955855 C e chlSab2.chr6 47091218 2158 + 50890351 T e rheMac3.chr19 60195348 2131 + 64156825 I a score=28374.000000 s hg38.chr19_GL949747v2_alt 365161 306 + 729520 ttttttttttttttttttttttttgagacggagtctcactctgtcgcccaggctggagtgcggtggcgcgatctcagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgcgtagctgggactacaggcgcccgccaccacgcccggctaattttttgtatttttagtagagacggggtttcaccatgttggccaggatggtctcgatctcctgacctcgtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgaaccaccgcgcccggccG s panTro4.chr19 59309474 306 + 63644993 ttttttttttttttttttttttttgagacggagtctcgctctgtcgcccaggctggagtgcggtggcgcgatctcagctcactgcaagctccgcctcctgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggtgcccgccaccacgcccggctaattttttgtatttttagtagagacggggtttcaccatgttagccagaatggtctcgatctcctgacctcgtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgaaccaccgcgcccggccG i panTro4.chr19 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e ponAbe2.chr19 56196346 0 + 60714840 C e calJac3.chr22 3409662 0 - 49145316 C e nomLeu3.chr10 3940461 0 + 106955855 C e chlSab2.chr6 47091218 2158 + 50890351 T e papAnu2.chr19 47392435 240 + 51301725 I e macFas5.chr19 55294842 730 + 59248254 I e rheMac3.chr19 60195348 2131 + 64156825 I a score=109784.000000 s hg38.chr19_GL949747v2_alt 365467 71 + 729520 GTTTCTATTattataatcacatcagacttctcatcagtcactctggaagtt----gacaagggagaaatgcgttt s panTro4.chr19 59309780 71 + 63644993 GTTTCTATTattataatcacatcagacttctcatcagtcactctggaagtt----gacaagggagaaatgcgttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56196346 71 + 60714840 gtttctattattataatcacatcaggcttctcatcagtcactctggaagtt----gacaagggagaaatgcattt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3940461 75 + 106955855 gtttctattatcataattacatcagacttctcatcagtcggtctggaatttagaaggccagggagaaatatATGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3842119 75 - 59248254 gtttctattatcataattacatcagacttctcatcagtcactctggaatttagacgaccagggagaaatacattt i macFas5.chr19 I 1477 C 0 s papAnu2.chr19 3806869 75 - 51301725 GTTTCTATTATCATAATTACATCAGACTTCTCATCAGTCACTCTGGAATTTAGACGACCAGGgagaaatacattt i papAnu2.chr19 I 1070 n 240 s calJac3.chr22 3409662 74 - 49145316 gtttctattgtcatcattgcatc-ggcttctcatctgtcactctggcagttagaagacaagggagaaatatattt i calJac3.chr22 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e chlSab2.chr6 47091218 2158 + 50890351 T e rheMac3.chr19 60195348 2131 + 64156825 I a score=26647.000000 s hg38.chr19_GL949747v2_alt 365538 28 + 729520 gaaaATAGCCTGT-ggccgggtgcagtgg s panTro4.chr19 59309851 28 + 63644993 gaaaATAGCCTGT-ggccgggtgcagtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56196417 28 + 60714840 gaaaATAGCCTAT-ggccgggcgcagtgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3940536 21 + 106955855 GAAAATACCCCAT-GGGCCG-------gg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3842194 29 - 59248254 gaaaATACCCCATGggccgggcgcggtga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47392675 28 + 51301725 gaaaatagcctaT-GGCCGGTctcagtgg i papAnu2.chr19 I 240 C 0 s calJac3.chr22 3409736 27 - 49145316 gaaaATAGCCCATGggccgggcaccat-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e chlSab2.chr6 47091218 2158 + 50890351 T e rheMac3.chr19 60195348 2131 + 64156825 I a score=229807.000000 s hg38.chr19_GL949747v2_alt 365566 115 + 729520 ctcacggctgtaatcccagcacgttgggaggccgaggcgggcagatcac--aaggtcagtagttcgagaccagcctggccagcatggtgaaaccctgtctctattaaaaatacaaaa--- s panTro4.chr19 59309879 115 + 63644993 ctcatggctgtaatcccagcacgttgggaggccgaggtgggcagatcac--aaggtcagtagttcgagaccagcctggccagcatggtgaaaccctgtctctattaaaaatacaaaa--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56196445 115 + 60714840 ctcatggctgtaatcccagcacgttgggaggccaaggcaggcagatcac--aaggtcaggagttcgagaccagcctggccagcatggtgaaaccctgtctctattaaaaatacaaaa--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3940557 117 + 106955855 ctcctgactgtaatcccagcattttggaaggtggatgcgggtggatcacctgaggccaggagttcgagaccagcctggccaacatggtaaaaccctgtttctactaaaaatacaaaa--- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3842223 117 - 59248254 ctcctgactgtaatcccagcactttggaaggcggatgcaggcagatcacctgaggccaggagttccagaccagcctgaccaacatgataaaaccctgtttctactaaaaatacaaaa--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47392703 116 + 51301725 ctcacggctgtaatcccagcactttgggaggccgaggtgggtggatcacctgaggtcaggagttcgagaccagcctggccagcatggtgaaaccctgtctctagtgaaaatac-aaa--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47089060 117 + 50890351 ctcacggctgcaatcccagcactttgggagggtgaggcaggtggatcacctgaggttgggagttcaagaccagcctgaccaacatggagaaaccctgtctctaccgaaaatacaaaa--- i chlSab2.chr6 T 2158 I 19 s calJac3.chr22 3409763 119 - 49145316 -tcccgcctataatcccagcacgttgggaggcagatgcaggcagatccactaaggccaagagttccagaccagcttgaccaacatggtgaaaccctgtctctactaaaaatacaaagaaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e rheMac3.chr19 60195348 2131 + 64156825 I a score=2607.000000 s hg38.chr19_GL949747v2_alt 365681 3 + 729520 aaa s panTro4.chr19 59309994 3 + 63644993 aAA i panTro4.chr19 C 0 I 5 s ponAbe2.chr19 56196560 2 + 60714840 aa- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3940674 3 + 106955855 aaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3842340 3 - 59248254 aaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47392819 3 + 51301725 aaa i papAnu2.chr19 C 0 C 0 s calJac3.chr22 3409882 3 - 49145316 aaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e chlSab2.chr6 47089177 19 + 50890351 I e rheMac3.chr19 60195348 2131 + 64156825 I a score=8407.000000 s hg38.chr19_GL949747v2_alt 365684 9 + 729520 ttagccagg s ponAbe2.chr19 56196562 9 + 60714840 ttagccggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3940677 9 + 106955855 ttagctgga i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3842343 9 - 59248254 atagctgga i macFas5.chr19 C 0 I 10 s papAnu2.chr19 47392822 9 + 51301725 ttagctagg i papAnu2.chr19 C 0 I 10 s calJac3.chr22 3409885 9 - 49145316 ttagccaga i calJac3.chr22 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e chlSab2.chr6 47089177 19 + 50890351 I e rheMac3.chr19 60195348 2131 + 64156825 I e panTro4.chr19 59309997 5 + 63644993 I a score=140422.000000 s hg38.chr19_GL949747v2_alt 365693 130 + 729520 ----------catgtctgtag--tcccagc----cactccagaagctgag-gcaggagaactgcttgaacccgggaggtggaggttggagtgaactgagattgcaccactgtacttcagcccgggcaac-agagtgagactctgtctc s ponAbe2.chr19 56196571 130 + 60714840 ----------catgtctgtag--tcccagc----cactccagaagctgag-gcaggagaattgcttgaacctgggagacagaggttggagtgagctgagattgcaccactgtactccagcctgggcaac-agagtgagactctgcctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3940686 135 + 106955855 ----------cctggtggcgggcccccatcatttcatctcggaaggctga-gtaggagaattgcttcaacctgggaggtggagcttgcagtgagccgagatcgcgccatcgcactccagcatgggcaac-agagtgagac-ctgtctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3842362 125 - 59248254 ----------ggcccctatca--tttcagc----t----cgggaggctga-gtaggagaattgcttcaacctgggaggtggagattgcagtgagccgagatggcgccactgcactccagcctgggcgac-agagtgagact-tgtctc i macFas5.chr19 I 10 n 10 s papAnu2.chr19 47392841 128 + 51301725 ----------catgcctgtag--tcccagt----tactccagaaggtgaa-gcaggagaattgcttgaacctgggaggtggaggttggagtgagctgagattgaactactgcactgcagcctgggtaac-agagtgagactctgtc-- i papAnu2.chr19 I 10 I 83 s chlSab2.chr6 47089196 131 + 50890351 ----------catgtctgtaa--tcccagc----tact-cgggaggctgaggcaggagaattacttgaactcgggaggtggaggttgcagtgagccgagattacaccattgcactccagcctgggcaacaagagtgaaactccatctA i chlSab2.chr6 I 19 I 13 s calJac3.chr22 3409894 130 - 49145316 cgtggtggcaggtgcctgtaa--tctcagc----t----cgggaggccaa-gc---agaattgcttcaacctgggaagtggaggttgcagtgagccgagatcacgctactgaactttagcctggataac-agagtgagact-tgtc-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e rheMac3.chr19 60195348 2131 + 64156825 I e panTro4.chr19 59309997 5 + 63644993 I a score=20916.000000 s hg38.chr19_GL949747v2_alt 365823 63 + 729520 aaaaaatga------------aagaaagaaagggagggagg--gagggagggagg-gagggaggaaggaaggaaggaa s ponAbe2.chr19 56196701 45 + 60714840 aaaaaatga------------aagaaagaaaggaaggaagg--gagggagggagg-aagg------------------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3940821 14 + 106955855 aaaaaaaaa------------aaaaa---------------------------------------------------- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55295572 63 + 59248254 agagagagg------------gagggagggagggaggccgg--gagggaggaagg-aaggaaggaaggaaggaaggaa i macFas5.chr19 I 730 C 0 s papAnu2.chr19 47393052 75 + 51301725 agagagagggaaagaaaaaaagaaagagggaggaaggaggg--aaggaaggaagg-aaggaaagaaggaaagaaggaa i papAnu2.chr19 I 83 C 0 s chlSab2.chr6 47089340 58 + 50890351 ------agg------------aaggaaggaaggaaggaagg--aaggaaggaaggaaaggaaagaaggaaagaaagga i chlSab2.chr6 I 13 C 0 s calJac3.chr22 3410024 60 - 49145316 -aagaaagg------------aagaaagggagaaagaaaagaaAAGAAagagaga-gagggagggaggaaagga---- i calJac3.chr22 C 0 I 1963 e canFam3.chr1 19785924 401 - 122678785 I e rheMac3.chr19 60195348 2131 + 64156825 I e panTro4.chr19 59309997 5 + 63644993 I a score=36113.000000 s hg38.chr19_GL949747v2_alt 365886 40 + 729520 tg--aaggaaggaaggaaggaag--------AAAATAGCCTATGTATTCC s ponAbe2.chr19 56196746 38 + 60714840 ----aaggaagaaaggaaggaag--------gaaATAGCCTATGTACTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3940835 32 + 106955855 ----aagaaagaaa------aag--------aaaATAGCCTATGTACTTC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55295635 46 + 59248254 ag--aaggaaagaaggaaagaaggaaa--gaaaAATAGCCTATCTACTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47393127 46 + 51301725 ag--aaggaaagaaggaaagaaggaaa--gaaaaatagcttaTCTACTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47089398 48 + 50890351 aggaaaggaaagaaggaaagaaagaaa--gaaaAATAGCCTATCTACTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45607553 48 + 49145316 TG--GAGGCAGACAAGAGAGAAATCTGTTTGAACACAGCCTATGTACTCC i calJac3.chr22 I 378 C 0 e canFam3.chr1 19785924 401 - 122678785 I e rheMac3.chr19 60195348 2131 + 64156825 I e panTro4.chr19 59309997 5 + 63644993 I a score=19467.000000 s hg38.chr19_GL949747v2_alt 365926 12 + 729520 TATGGAGAGATC s panTro4.chr19 4237497 12 - 63644993 TATGGAGAGATC i panTro4.chr19 I 13529 C 0 s ponAbe2.chr19 56196784 12 + 60714840 TATGGAGAGAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3940867 12 + 106955855 TATGGAGAGATC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47393173 12 + 51301725 TATGGAGAGATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47089446 11 + 50890351 TATGGAGAGAT- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45607601 12 + 49145316 TATGGAGAGATC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e macFas5.chr19 55295681 0 + 59248254 C e rheMac3.chr19 60195348 2131 + 64156825 I a score=564443.000000 s hg38.chr19_GL949747v2_alt 365938 205 + 729520 CCAGAGTGTATTCTTAGAGATTAAACGACATCAGGATGTCATCTGTATTGTGCCAAGAATTGGGGGAATCAGAATATACATTCATATTGACTCATATTCACCCAGAAACAAACACTGGAAGGATTAATATGAGAAAGTTAAAATTGTGGCTCTCCCACGTTTTCTTccccgtccacccacctgaacaagctgcggtcctagaaat s panTro4.chr19 4237509 185 - 63644993 CCAGAGTGTATTCTTAGGGATTAAA----------------TCTGTATTGTGCCAAGAATTGGGGGAATCAGAATATACATTCATATTGTCTCATATTCACCCAGAAACAAACACTGGAAGGATTAAT---AGAAAGTTAAAATTGTGGCTCTCCCACGTTTTCTCccccatcca-ccacctgaacaagctgcagtcctagaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56196796 205 + 60714840 CCAGAGTGTATTCTTAGAGATTAAACGACATCAGGATGTCATCTGTATTGTGCCAAGAATTGGGGGAATCAGAATATGCATTCATATTGACTCATATTCACCCAGAAACAAACATTGGAAGGATTAATATGAGAAAATTAAAATTGTGGCTCTCCCACGTTTTCTTccccatccacccacctggacaagctgcagtcctggaaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3940879 202 + 106955855 CCAGAGTGTATTCTTAGGGATTAAACGACATCAGGATGGTGGCTGTATTGTGCCAAGAATT---GGAATCAGAATATACATTCATATTGACTCATATTCACCCAGAAACAAACACTGGAAGGATTAATATGAGAAAGTTAAAATTGTGGCTGTCCCACGTTTTCTTCCCCGTCGACCCACCTGGAcaagctgcagacctagaaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60197479 205 + 64156825 CCAGAGTGTATTCTTAGGGATTAAATGACATCAGGATGACGTCTGTATTGTGCCAAGAACTGGGGAAATCAGAATATACATTCATACTGACTTATACTCACCCAGAAACAAACAGTGGAAGGATTGACATGAGAAAATTAAAATTGTGGCTCTCCCACGTTTTCTTCCCGGTCGACCCACCTGGACAAGCTGCAGACCTAGAAAT i rheMac3.chr19 I 2131 I 95 s macFas5.chr19 55295681 203 + 59248254 --AGAGTGTATTCTTAGGGATTAAATGACATCAGGATGACGTCTGTATTGTGCCAAGAACTGGGGAAATCAGAATATACATTCATACTGACTTATACTCACCCAGAAACAAACACTGGAAGGATTAATATGAGAAAATTAAAATTGTGGCTCTCCCACATTTTCTTccccatcgacccacctggacaagctgcagacctagaaat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47393185 205 + 51301725 CCAGAGTGTATTCTTAGGGATTAAATGACATCAGGATGACGTCTATATTGTGCCAAGAACTGGGGAAATCAGAATATACATTCATACTGACTTATACTCACCCAGAAACAAACAGGGGAAGGATtaatatgagaaaattaaaattgtggCTCTCCCACGTTTTCTTCCCCATCGACCCACCTGGACAAGCTGCAGACCTAGAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47089457 194 + 50890351 -----------TCTTAGAGATTAAACGACATCCGGATGACGTCTGTATTGTGCCAAGAACTAGGGAAATCAGAATATACATTCATACTGACTTATGCTCACCCAGAAACAAACACTGGAAGGATTAATATGAGAAAATTAAAATTGTGGCTCTCCCACATTTTCTTccccatcgacccatctggacaagctgcagacctagaaat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45607613 204 + 49145316 CCAGAATGCATTCTTAGGGATTAAATGACATCAGGATGGCGTCGGCACTGTGCCAAGAATTGGAGGAATCAGAATGTACATTCATATTGACTTATATTCACCCAGAAACAAACACCTTAAGGATTCACATGAGAAAATTAAAATTGTGGCTCTCCCACGTTTTCTTCCCC-TCGACCCGCCTGGACAAGCTGCAGAGCCAGAGAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I a score=279032.000000 s hg38.chr19_GL949747v2_alt 366143 127 + 729520 cacctccgactgctcctctttctcaccctctccccttgttctaccttcagaatctgtcctcatgcagacactgcttgccagcaccacggcgccaggttcaccctctctctcctcgtccagggaacat s panTro4.chr19 4237694 126 - 63644993 cgcct-caactgctcctctttctcaccctctccccttgttctaccttcagaatctgtcctcatgcagatacggcttgccagcaccacggtgccaggttcaccctctctcccctcgtccagggaacat i panTro4.chr19 C 0 n 0 s ponAbe2.chr19 56197001 126 + 60714840 cccct-cgactgctcctctttctcaccctctccccttgttctaccttcagaatctgtcctaatgcagacacggcttgccagcaccacggtgccaggttcaccctctctctcctcgtccagggaacat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3941081 126 + 106955855 cgcct-cgactgctcctctttctcaccctctccccttgttccaccttcagaatctgtcctcatgcagacacggcttgccagcaccacggcaccaggttcaccctctctcccctcgtccagggaacat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55295884 126 + 59248254 cccct-cgactgcttctctttctcaccctctccccttgttctaccttcagaatccgtcctcatgcagacacggcttgccagcaccacgatgccaggttcaccctctctcccctcctgcagggaacat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47393390 126 + 51301725 CCCCT-TGACTGCTTCTCTTTCTCACCCTCTCCCCTTGTTCTACCTTCAGAATCCGTCCTCATGCAGCCACGGCTTGCCAGCACCACGGTGCCAGGTtcaccctctctcccctcctgcaGGGAACAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47089651 126 + 50890351 cccct-cgactgcttctctttctcaccctctccccttgttctaccttcagaatccgtcctcatgcagacacagcttgccagcaccacagtgccaggttcaccctctctcccctcctgcagggaacat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45607817 112 + 49145316 CACCT-CGACGGCTCCTCTTTCTCACCCTCTCCCCTTGTCCTAGCTTCAGAGTCTGCCCTTACGCAGACACGGCGTGCCAGCACCGCGGAGCCAGGT-------------CCTCGTCCAGGGAACA- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e rheMac3.chr19 60197684 95 + 64156825 I a score=83651.000000 s hg38.chr19_GL949747v2_alt 366270 54 + 729520 tccctaagtggtgtctctgtgttcatttgctgcttcttagctg---ttctcctcatt s ponAbe2.chr19 56197127 57 + 60714840 cccctaagtggtgtctctgtgttcatttgctgcttcttagccgtccttctcctcatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3941207 57 + 106955855 cccctagctggtttctccacgctcatttcttgctactcagctgcccctctccatatt i nomLeu3.chr10 C 0 I 2959 s macFas5.chr19 55296010 57 + 59248254 cccctagctggcgtctctgtgttcatttgctgcttcttagccgtccttctcctcatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47393516 57 + 51301725 CCCCTAGCTGGCGTCTCTGTGTTCATTTGCTGCTTCTTAGCCGTCCTTCTCCTCATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47089777 57 + 50890351 cccctaactggcgtctctgtgttcatttgctgcttcttagccgtccttctcctcatt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45607929 56 + 49145316 cccctaactggtgtctctgtgttcatttgttccttcttggccgtc-ttctccacgtt i calJac3.chr22 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e rheMac3.chr19 60197684 95 + 64156825 I e panTro4.chr19 4237820 0 - 63644993 I a score=43708.000000 s hg38.chr19_GL949747v2_alt 366324 26 + 729520 gtagccagggtgatgttttcaaaggg s ponAbe2.chr19 56197184 26 + 60714840 gtagccagggtgatgttttaaaatgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102930762 26 - 106955855 gtagccagggtgatgttttaaaaggg i nomLeu3.chr10 I 100 C 0 s macFas5.chr19 55296067 26 + 59248254 atagccaggatgatgttttaaaaggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47393573 26 + 51301725 ATAGCCAGGATGATGTTTTAAAAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47089834 26 + 50890351 atagccagggtgatgttttaaaaggg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45607985 26 + 49145316 gtagccagggcgatcttttaagaggg i calJac3.chr22 C 0 I 605 e canFam3.chr1 19785924 401 - 122678785 I e rheMac3.chr19 60197684 95 + 64156825 I e panTro4.chr19 4237820 0 - 63644993 I a score=21515.000000 s hg38.chr19_GL949747v2_alt 366350 20 + 729520 tcagtcaaatcatgtctcgc s ponAbe2.chr19 56197210 20 + 60714840 tcgatcaaatcatatctcgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102930788 19 - 106955855 tc-accaaatcatgtctcgt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55296093 20 + 59248254 tcgatcaaatcatgtctcat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47393599 20 + 51301725 TCGATCAAATCATGTCTCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47089860 20 + 50890351 tcgatcaaatcatgtctcat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 45608011 605 + 49145316 I e rheMac3.chr19 60197684 95 + 64156825 I e panTro4.chr19 4237820 0 - 63644993 I a score=267708.000000 s hg38.chr19_GL949747v2_alt 366370 158 + 729520 taccattgaaatctccagtga-ttcatgatgtacttcgcccaaaacccaaactctgtgacctacgggacactcactcacctctccagtttcatgttggtccctgtgcccctcactccctgccctcaggccacatgacattcctgctgttccttgaagac s ponAbe2.chr19 56197230 157 + 60714840 taccattgaaatctccagtga-ttcatggtgcactttgcccaaaacccaaactctgtgacctatgggacactcact-acctctctagtttcactttggtccctgtgcgcctcactccctgccctcaggccatatgacattcctgctgttccttgaagac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102930807 158 - 106955855 taccattgaaatctccagtgacttcacggtgcacttcgcccaaaacccaaactctgtgacctacgggacactcact-acctctctagtttcactttggtccccgtgcccctcactcactgccctcaggccacatgacattcctgctgttccttgaagac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60197779 157 + 64156825 taccatcgaaatctccagtgacttcacggtgcacttcgcccaaaacccaaa--ctgtgacccacgggacactcactcagctttccaatttcacattggtccctgtgcccctcactccctgccctcaggccacatgacattcccgctgttccttgaagac i rheMac3.chr19 I 95 C 0 s macFas5.chr19 55296113 158 + 59248254 tacca-cgaaatctccagtgacttcacggtgcacttcgcccaaaacccaaactctgtgacccacgggacactcactcagctttccaatttcacattggtccctgtgcccctcactccctgccctcaggccacatgacattcccgctgttccttgaagac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47393619 158 + 51301725 TACCA-TGAAATCTCCAGTGACTTCACAGTGTACTTCGCCCAAAACCGAAACTCTGTGACCCACGGGACACTCACTCATCTTTCCAATTTCGCATTGGTCCCTGTGCCCCTCACTCCCTGCCCTCAGGCCACGTGACATTCCCGCTGTTCCTTGAAgac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47089880 158 + 50890351 tacct-tgaaatctccagtgacttcacggtgcacttcgcccaaaacccaaactctgtgacccacgggacactcactcagctttccaatttctcattggtccctgtgcccctcactccctgccctcaggccacatgacgttcccgctgttccttgaagac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 45608011 605 + 49145316 I e panTro4.chr19 4237820 0 - 63644993 I a score=1009174.000000 s hg38.chr19_GL949747v2_alt 366528 475 + 729520 accaggtccctccctgccttgggactctgcgtctctgcctgggtgcactgacctcctgctttgcaccacagcctccaggtctctgctcagcatcatcttagcaagaagggccttctcagatcactctgttgaaagaagtccact--cccctgacacccatccctttgctaagaagatttgtcttcattctctcttgacgttcatcctcctttctaattatctactctttgacttgtacgctgtccctctctccccattagaatggagacttcacttggccagggaccttgtctgtcttgatcatcactctatcaccggtacttagggcctggcacataatagatgctcagcaaatacttgtagaac---gaatAGTGAATCAGAAACAATATTGGCCATTGTTTACTGGACATTTAAAggttaaataatggcacccctatgcaatgaaatactggattagcattaaaaatgatgctgctg s ponAbe2.chr19 56197387 473 + 60714840 accaggtccctccctgcctaggggcaccgcgtctctgtctggatgcaccgacctcctgctttgcaccacagtctccaggtctctgctcagcatcatctcagcaagaagggccttcccagaccactgtgttgaaagaagtccactcccccctgacacccatcccttcgctaagaagatttgtcttcatttcctcttgacgttcgtcctcctttctagttatctactctttgacttgtatgctgtccctttctccccattagaatggagacttcacttggccagggacct----tgtcttgatcatcactctatcactggtacttagggcctggcacataacagatgctcagcaaatacttgtagaac---gaaaagtgaatCAGAAAAAATATTGGCCATTGTTTACTGGACATttaaatgttaaataatggcacccctatgcaatgaaatactggatgagcattaaaaatgatgctgctg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102930965 475 - 106955855 accaggtccccccctgcctcggggcgctgcgtctctgtctggatgcacccacctcctgctttgcaccacagcctccaggtatctgctcagcatcatctcagcaagaagggccttcccagaccactgtgttgaaagaagtccact--ctcctgacacccatcccttcgctaagaagattcatcttcattccctcttgacgttcatcctcctttctaattatctactctttgacttgtacgctgtccctctctccccattagaatggagacttcacttggccagggagcttgtctgtcttgattatcactctatcgcctgtacttagggcctggcacataatagatgctcagcaaacacttgtagaat---gaatAGTGAGTCAGAAACAATATTGGCCATTGTTTACTGGACATTTAAAGGTTAAATAATGGCACCCCTATGCAATGAAATACTGGATGAGCATTAAAAACGACGCTGCTg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60197936 473 + 64156825 accaggtccctccctgcctcagggctcctcctctctgcctggatgacccaacctcctgctttgcaccacagcctccagg--tctgctcagcaccatctcagcaagaagggccttcccagaccaccctgttgaaagaagtccact--cccctgacaccaatccctttgctaaggaggtttgtcttccttccctcttgacgttcatcctcctttctaattatctactcattgactcgtacgctgtccccctcccgcagttagaatggagacttcacttggccagggacctcttctgtcttgatcatcactctatcactggtacttagggccgggcacataatagatgttcagtaaatacttgtagaat---gaatAGTGAATCAGAAACAATATTGGCCATTGTTTACTGGACATTTAAAggttaaataatggcacctctttgcaatgaaatactggatgagcattaaaaatgatgctgctg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55296271 473 + 59248254 accaggtccctccctgcctcagggctcctcctctctgcctggatgacccaacctcctgctttgcaccacagcctccagg--tctgctcagcaccatctcagcaagaagggccttcccagaccaccctgttgaaagaaatccact--cccctgacacccatccctttgctaaggaggtttgtcttcattccctcttgacgttcatcctcctttctaattatctactcattgactcgtacgctgtccccctcccgcagttagaatggagacttcacttggccagggacctcttctgtcttgatcatcactctatcactggtacttagggccgggcacataatagatgttcagtaaatacttgtagaat---gaatAGTGAATCAGAAACAATATTGGCCATTGTTTACTGGACATttaaaggttaaataatggcacctctttgcaatgaaatactggatgagcattaaaaatgatgctgctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47393777 451 + 51301725 accaggtccctccctgccTCAGGGCTCCTCCTCTCTGCCTGGATGACCCAACCTCCTGCTTTGCACCACAGCCTCCAGG--TCTGCTCAGCACCATCTCAGCAAGAAGGGTCTTCCCAGACCACTCTGTTGAAAGAAGTCCACT--CCCCTGACACTCATCCCTTTGCTAAGAAGGTTTGTCTTCGTTCCCTCTTGATGTTCATCCTCCTTTCTAATTATCCACTCATTGACTCATACGGTGT-CCTCTCCTGCAGTTAGAATGGAGACTTCACTTGGCCAGGGACCTCTTCTGTCTTGATCATCACTCTATTACTGGTACTTAGGGCCAGGCACATaatagatgttcagtaaatacttgtAGAAT---GAATAGTGAATCAGAAACAATATTGGCCATTGTTTACTGGACATTTAAAGGTTAAATAATGGCACCCCTTTGCAATGAAATACTGgatg---------------------g i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47090038 434 + 50890351 accaggtccctccctgcctcagggctcctcctctctgcctggatgacccaacctcctgctttgcaccacagcctccaggtctctgctcagc--------------------cttcccagaccactctgttgaaagaagtccact--tccctgacactcatccctttgctaaggaggtttgtcttcattccctcttgatgttcatcctcctttctaattatctactcattgactcgtacgctgtccccctcccgcagttagaatggagacttcacttggccagggacctcttctgtctagatcatcactctatcaccggtacttagggccgggcacataatagatgttcagtaaatacttgtagaat---gaatAGTGAATCAGAAACAATATTGGCCATTGTTTACTGGATATTTAAAGGTTAAATAATGGCACCCCTTTGCAATGAAATACTGGATG---------------------g i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45608616 476 + 49145316 accaggtccctccctgcctc-gggtgctgagtctctgcccggatgcgccgacctcctgctttgcaccacagcctccaggtctctgctcagcatcatctcagcaagaagggccttccctgaccactccgttgaaagaagcgcact--cccctgacacccctcccttcgctagcaaggtttatcctcattccctcttgacgtttatcctcctttccaattatccacccattgacttgtacgctgtccctctccccacattagaatggagacttcac-tggccagagacctcacctgtcttcatcttcaccctatcactggcacttaggtcctggcgcataatagatgctcagcaaacacttgtagaacgaagaatAGTGAATCAGAAACAACATTGGCCATTGTTTCCTGGACATTCGAAGGTTGGatcatggcacccctatgcagtgaaatactggatgatcattcaagatgatggtgttg i calJac3.chr22 I 605 I 9231 e canFam3.chr1 19785924 401 - 122678785 I e panTro4.chr19 4237820 0 - 63644993 I a score=92268.000000 s hg38.chr19_GL949747v2_alt 367003 55 + 729520 gccgggcacggcggctcatgcctgtaatcccagcactttgggaggccaaggcggg s ponAbe2.chr19 56197860 55 + 60714840 gccgggcacagtggctcattcctgtaatcccagcactttgggaggccaaggcggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102931440 55 - 106955855 gccgggcactgtgcctcatgcctgtaatcccagcactttgggaggctgagtcggg i nomLeu3.chr10 C 0 M 199 s rheMac3.chr19 60198409 55 + 64156825 gctgggtgtggtggctcacacctgtaatcccagcactttgggaggctgaggcggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55296744 55 + 59248254 gctgggtgtggtggctcacacctgtaatcccagcactttgggaggctgaggcggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47394228 55 + 51301725 gctgggtgtgatggctcacacctgtaatcccagcactttgggaggccgaggcggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47090472 55 + 50890351 gctgggtgtggtggctcacgcctgtaattccagcactttgggaggccgaggcggg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 45609092 9231 + 49145316 I e panTro4.chr19 4237820 0 - 63644993 I a score=71224.000000 s hg38.chr19_GL949747v2_alt 367058 60 + 729520 cggatcacctgaggtcaggagtttgagaccagcctgaccaacaggatgaaacctcatctc s ponAbe2.chr19 56197915 60 + 60714840 cggatcacctgaggtcaggagtttgagaccagcctggccaacaggatgaaacctcatctc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60198464 58 + 64156825 cagatcac--aaggtcaggagttcaagaccagcctgaccaacatggtgaaacctcatctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55296799 58 + 59248254 cagatcac--aaggtcaggagttcaagaccagcctgaccaacatggtgaaacctcatctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47394283 58 + 51301725 cagatcat--gaggtcaggagttcaagaccagcctgaccaacatggtgaaacctcatctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47090527 58 + 50890351 cagatcat--gaggtcaggagttcgagaccagcctgaccaacatggtgaaacctcatctc i chlSab2.chr6 C 0 I 1309 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 45609092 9231 + 49145316 I e nomLeu3.chr10 102931495 199 - 106955855 M e panTro4.chr19 4237820 0 - 63644993 I a score=285494.000000 s hg38.chr19_GL949747v2_alt 367118 370 + 729520 -----------------------------------------------------------------------cactaaaaataaaaaaaatagcttggcatggtggcgcacacctgtaatcccagctactcaggaggccgaggcaggagaatcacttgagcctgggaggcggaggttgcagtgagctgagatcgtgccactgcactccgggctgccccacacagcgaaactctgtctcaaaga----aaaaaaaaaaaaaaggatgatgttgttttacttttattgacatgaaagatgtcaagggtattgttgagtgaacaaaacaggaaaaacacatgtatgtagaagttacatacattaagttatatatgtacatttacacacatgtttatggaaggagagatttctgagaaagtgttaacagaaatgtttgctgtgattaaca s ponAbe2.chr19 56197975 369 + 60714840 -----------------------------------------------------------------------tactaaaaataaaaaaattagcttggtatggtggcgcacacctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcagaggctgcagtgagccgagatcctgccactgcactctaggctgcacgacacagcaaaactctttctcaaag-----aaaaaaaaaaaaagggaggatgctgttttacttttattgacatggaagatgtcaagggtattgttgagtgaacaaaacaggaaaaaaacatgtatgtagaggtttcatacattaagttatatatgtacatttacgcacatgtttatggaaggagagatttctgagaaggtgttaacagaaatgtttgctgtgattaACA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60198522 431 + 64156825 agctaaaaaaacaaaacaaaac--aaaaacttaaaaacaaaacaaaacaaacaaacaaaatactggatgaacattaaaaatgatgctgctggcttggcatggtggcacacacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcagaggttgcagtgagatgagatcgcgccactgcactccaggctaggcgacacagcggaactctgtctc---------aaaaaaaaaaaaaaggatgatgctgttctgtttttattgacatggacgatttcaagggtattgttgactgaacgaaacag-gaaaaaacatgtttgtagaggttacatacattaagttacatatgtacatttgcacac--gtttatggaaggagagatttctgaggaagtgttaacacaaatgtttgcagtgattaACA i rheMac3.chr19 C 0 I 43 s macFas5.chr19 55296857 432 + 59248254 agctaaaaaaacaaaacaaaacaaaaaaacttaaaaacaaaacaaaacaaacaaacaaaatactggatgaacattaaaaatgatgctgctggcttggcatggtggcacacacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcagaggttgcagtgagctgagatcgcgccactgcactccaggctaggcgacacagcgaaattctgtctc---------aaaaaaaaaaaaaaggatgatgctgttctgtttttattgacatggaagatttcaagggtattgttgactgaacgaaacagtaaaaaaacatgtttgtagaggttacatacattaagttacatatgtacatttgcacac--gtttatggaaggagagatttctgaggaagtgttaacacaaatgtttgcagtgattaa-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47394341 432 + 51301725 agctaaaaaaaaa-----------aaaacttaaaaaacaaaacaaaacaaacaaacaaaatactggATGAGCATTAAAAATGATGCTGctggcttggcatggtggcacatacctgtaatcccagctactcaggaggctgaggcaggagaatcgctttaaccggggaggcagaggttgcagtgagctgagatcgtgccactgcactccaggctgggcgacacagcgaaactctgtttcaaaaaaaaaaaaaaaaaaaaaaaggatgatgcTGTTTTACTTTTATTGACATGGAAGATTTCAAGGGTATTGTTGAgtgaacaaaacaggaaaaaaacatgtTTGTAGAGGTTACATACATTAAGTTACATATGTACATTTGCACAC--GTTTATGGAagaagagatttctgagaaagtgttaaCACAAATGTTAGCAGTGATTAAca i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 45609092 9231 + 49145316 I e nomLeu3.chr10 102931495 199 - 106955855 M e chlSab2.chr6 47090585 1309 + 50890351 I e panTro4.chr19 4237820 0 - 63644993 I a score=13837.000000 s hg38.chr19_GL949747v2_alt 367488 48 + 729520 tgaggtaatgagggtttcaaattctctcatttcattttttatgagttg s ponAbe2.chr19 56198344 48 + 60714840 TGAGGTAATGAGGGTTTCAAATTCTCTCATTTCATTTTTTATGAGTTG i ponAbe2.chr19 C 0 I 442 s macFas5.chr19 55297289 31 + 59248254 -----------------cagattctcttattttattttttatgagttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47394773 29 + 51301725 -------------------gattcttttattttattttttatgagttg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 45609092 9231 + 49145316 I e nomLeu3.chr10 102931495 199 - 106955855 M e chlSab2.chr6 47090585 1309 + 50890351 I e rheMac3.chr19 60198953 43 + 64156825 I e panTro4.chr19 4237820 0 - 63644993 I a score=4149.000000 s hg38.chr19_GL949747v2_alt 367536 15 + 729520 ttttatttggatttt s macFas5.chr19 55297320 15 + 59248254 ttttatttggatttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47394802 15 + 51301725 ttttatttggatttt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e ponAbe2.chr19 56198392 442 + 60714840 I e calJac3.chr22 45609092 9231 + 49145316 I e nomLeu3.chr10 102931495 199 - 106955855 M e chlSab2.chr6 47090585 1309 + 50890351 I e rheMac3.chr19 60198953 43 + 64156825 I e panTro4.chr19 4237820 0 - 63644993 I a score=8866.000000 s hg38.chr19_GL949747v2_alt 367551 295 + 729520 ttttttt-----gagacggagtctcgctctgtcgcccaggctggagtgcagtggtgccatctcggctcactgcaagctctgcctt-ctgggttcatgccattctcctgcctcggcctcccaagtagctgggaccacaggcgcccgccacc-acgccaggctaattttt-------------tgtatttttagtagagatggggtttcaccgtgttgaccgggatggt-------------------------------ctcaatctcctgaccttgtg--atccaccagccttggcctcccaaaatgctgggattacaggcatgagccaccgcgcctggtcCCTGGAC s papAnu2.chr19 47394817 342 + 51301725 tttttttttttaaagaaaaggtcttgctctgttacccaggctgaagtgtag-ggcgcgatcacaactcactgcattCTCAACCTTGCAGGGCTCAGGTCaacctcccaactcagcctcccgagtagctgggacttcagatgcgtgccacccacacccagctaatttttcttttttcttttttttttttttttttgagacggagtctcactctgtcgcccaggctggagtgcagtggcgtgatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccttgtagctgggactacaggtgcctgctaccacgtccggct-----aa i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e ponAbe2.chr19 56198392 442 + 60714840 I e calJac3.chr22 45609092 9231 + 49145316 I e nomLeu3.chr10 102931495 199 - 106955855 M e chlSab2.chr6 47090585 1309 + 50890351 I e macFas5.chr19 55297335 0 + 59248254 C e rheMac3.chr19 60198953 43 + 64156825 I e panTro4.chr19 4237820 0 - 63644993 I a score=1092.000000 s hg38.chr19_GL949747v2_alt 367846 2 + 729520 tt s rheMac3.chr19 60198996 2 + 64156825 tt i rheMac3.chr19 I 43 C 0 s macFas5.chr19 55297335 2 + 59248254 tt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47395159 2 + 51301725 tt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e ponAbe2.chr19 56198392 442 + 60714840 I e calJac3.chr22 45609092 9231 + 49145316 I e nomLeu3.chr10 102931495 199 - 106955855 M e chlSab2.chr6 47090585 1309 + 50890351 I e panTro4.chr19 4237820 0 - 63644993 I a score=180398.000000 s hg38.chr19_GL949747v2_alt 367848 277 + 729520 tttttttt----------taaagaaagggtcctgctcttgtcacccaggctgaagtgcaggacgcgatcgtagctcactgcactctcaacctcgcagggctcaggtcaacctcccaactcagcctcccgagtagctgggacttcagaagcgtgcca-----cgcacacccggctaatttttgtattttgtatctaactcctgggctcaagcgatccgcctgcctctgtctcccaaaatgcttggattacaggtgtgagccaccatgcctggGTGAA----ttttttttt-------ttttttg s ponAbe2.chr19 56198834 283 + 60714840 tttttttt----------taaagaaagggtctttctct-gtcacccaggctgaagtgcagggcgcaatcatagctcactgcactctgaacctcgcagggctcaggtcaacctcccaactcagcctcccgagtagctgggacttcagacgcgtgcca-----cccacccccagctaatttttgtattttgtatctaactcctgggctcaagcgatccacctgcctctgcctcccagagtgctggaattacaggtgtaagtgactatgcctggctGAA----tttttttttcttttttttttttg i ponAbe2.chr19 I 442 C 0 s rheMac3.chr19 60198998 273 + 64156825 tttttttt----------taaagaaagggtcttgctct-gttacccaggctgaagtgcagggtgcgatcacagctcactgcattctcaacctcgcagggctcaggtcaacctcccaactcagcctcctgagtagctgggacttcagacgtgtgcta-----cccacacccagctaatttttgtattttgtatctaactcctgggctcaagcgatcctcctacctctgcctcccaaagtgctgggattacaggtgtaagccaccatgcctggcTGAA-------tttttt-------ttttttg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55297337 278 + 59248254 tttttttt----------taaagaaagggtcttgctct-gttacccaggctgaagtgcagggtgcgatcacagctcactgcattctcaacctcgcagggctcaggtcaacctcccaactcagcctcttgagtagctgggacttcagacgtgtgcta-----cccacacccagctaatttttgtattttgtatctaactcctgggctcaagcgatcctcctacctctgcctcccaaagtgctgggattacaggtgtaagccaccatgcctggcTGAA--ttttttttttt-------ttttttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47395161 262 + 51301725 ttttttttgtagttttagtagagacggggtttcaccat-gttagccaggatg-------------------gtctcgct---ctcctgacctt-----------gtgatccgcccctttcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcctggccccagctagtttttgtattttgtatctaactcctgggttcaagcgatccgcctgtctctgcctcccaaagtgctgggattacaggtgtaaaccaccatgcctgactgaatatattttttttt-------tttttgg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 45609092 9231 + 49145316 I e nomLeu3.chr10 102931495 199 - 106955855 M e chlSab2.chr6 47090585 1309 + 50890351 I e panTro4.chr19 4237820 0 - 63644993 I a score=58639.000000 s hg38.chr19_GL949747v2_alt 368125 46 + 729520 agatggagtttcactcttgttgcccaggctggagtgcaatggtgca s ponAbe2.chr19 56199117 46 + 60714840 agatggagtttcactcttgttgcccaggctggagtgcaatggtgcg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60199271 44 + 64156825 agacggagtttcactcttgtcgctcaggctggagtgcaatggtg-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55297615 46 + 59248254 agacggagtttcactcttgtcgctcaggctggagtgcaatggtgcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47395423 46 + 51301725 agatggagtttcactcttgtcgctcaggctggagtgcaatggtgcg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47091894 46 + 50890351 aganggagtttcactcttgtcgctcaggctggagtgcaatggtgcg i chlSab2.chr6 I 1309 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 45609092 9231 + 49145316 I e nomLeu3.chr10 102931495 199 - 106955855 M e panTro4.chr19 4237820 0 - 63644993 I a score=88059.000000 s hg38.chr19_GL949747v2_alt 368171 72 + 729520 atctcggctcgccaccacctccgcctgc---------------------------------cgggttcaagtgattctcctgcctcagcctcctgagtagctggg s ponAbe2.chr19 56199163 72 + 60714840 atcttggctcaccgccacctccgcctcc---------------------------------caggttcaagtgattctcctgcctcagcctcctgagtagcaggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102931695 72 - 106955855 atctcggctcaccgccacctccgcctcc---------------------------------cgggttcaagtgattctcctgcctcagcctcccaagtagctggg i nomLeu3.chr10 M 199 C 0 s rheMac3.chr19 60199315 71 + 64156825 ----------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttcaagtgattctcctgcc------tcccaagtagctggg i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55297661 66 + 59248254 atgtcggctcaccaccacttctgcctcc---------------------------------tgggttcaagtgattctcctgcc------tcccaagtagctggg i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47395469 72 + 51301725 atctcggctcaccaccacctctgcctcc---------------------------------tgggttcaagtgattctcctgcctcagcttcccaagtagctggg i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47091940 72 + 50890351 atctcggctcaccaccacctctgcctcc---------------------------------tgggttcaagtgattctcctgcctcagcctcccaagtagctggg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 45609092 9231 + 49145316 I e panTro4.chr19 4237820 0 - 63644993 I a score=370786.000000 s hg38.chr19_GL949747v2_alt 368243 167 + 729520 attagaggcatacgccaccacgcccagctaattttgtatttttagtagagacagggtttccccatgttggtcaggctggtctcaaactcccgacctcaggcgatctgcccacctcagcctcccaaagtgctgggattataggggtgagccaccgtg-ctggccgaa-tt s panTro4.chr19 59310002 167 + 63644993 attagaggcatacgccaccacgcccagctaattttgtatttttagtagagacggggtttccccatgttggtcaggctggtctcaaactcccgacctcaggcgatctgcccacctcagcctcccaaagtgctgggattataggggtgagccaccgtg-cTGGCCGAA-TT i panTro4.chr19 I 5 C 0 s ponAbe2.chr19 56199235 168 + 60714840 attacaggcatatgccaccacgcccggctaattttgtatttttagcagagacggggtttccccatgttggtcaggctggtctcaaactcccaacctcaggtgatctgcccacctcagcctcccaaaatgctgggattacaggcgtgagccaccgtgcccagccGAA-TT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102931767 169 - 106955855 attagaggcatgcgccaccacgccctgctaattttgtatttttagtagagacggggtttccccacgttggtcaggctggtctccaactcccgacctcaggcgatctgcccacctcagcctcccaaagtgctgggattacaggcgtgagccaccgtgaccggccGAATTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60199387 169 + 64156825 attacaggcatgcgccaccatgcccggctaattttgtatttttagtagagacggggtttctccatgttggtcaggctggtctccaagtctggacctcaggtgatccgcccacgtcagcctcccaaagtgctgggattacaggtgtgagccactgcgtccagtcAAATTT i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55297728 169 + 59248254 attacaggcatgcgccaccatgcccggctaattttgtatttttagtagagacggggtttctccatgttggtcaggctggtctccaagtctggacctcaggtgatccgcccacgtcagcctcccaaagtgctgggattacaggtgtgagccactgcgtccagtcaaattt i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47395542 169 + 51301725 attacaggcatgcgctaccacgcccggctaattttgtgttttcaatagagacggcgtttctccatgttggtcaggctggtctccaagtctggacctcaggtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccactgcgtccggtgaaattt i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47092012 169 + 50890351 attacaggcatgcgccaccacgcccggctaattttgtgttttcaatggagacagggtttctccatgttggtcagcctggtctccaagtctggacctcaggtgatccgcccacctcagcctcccaaagttctgggattacaggcgtgagccactgcgtccggTGAAATTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 45609092 9231 + 49145316 I a score=645374.000000 s hg38.chr19_GL949747v2_alt 368410 265 + 729520 tttttacattaagcatgtgtcag--tcgtaactaggaaaaacaaAATTA-TTTTTGTTTAAG----------AAGATA----AAATAAAATGGCCACCTATGAGGAGCTGGGAGTACAGGCTTAGGTGGAAACAGATAAGGTGTCAAGACCTCCTT-CTGTGACTGACCCCTTCAGATTTTCTCCCta-gagtttcagtcatgcaagatgagga-ggtctcagagcctcctgtgcggtgtagtgccagcaggtaacaatacagtattgtgtgcttacacatttgc s panTro4.chr19 59310169 265 + 63644993 TTTTTACATTAAGCATGTGTCAG--TCGTAACTAGGAAAAACAAAATTA-TTTTTGTTTAAG----------AAAATA----AAATAAAATGGCCACCTATGAGGAGCTGGGAGTACAGGCTTCGGTGGAAACAGATAAGGTGTCAAGACCTCCTT-CTGTGACTGACCCCTTCAGATTTTCTCCCta-gagtttcagtcatgcaagatgagga-ggtctcagagcctcctgtgcggtgtagtgccagcaggtaacaatacggtattgtgtgcttacacatttgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56199403 265 + 60714840 TTTTTACATTAAGCATGTGTCAG--TCGTAACTAGGAAAAACAAAATTA-TTTTTGTTTAAG----------AAAATA----AAACAAAATGGCCATCTATGAGGAGCTGAGAGTACAGGCTTAGGTGGAAACAGATAAAGTGTCAAAACCTCCTT-CTGTGACTGATCCTTTCACATTTTCTCCCta-gagtttcagtcatgcaagatgagga-aggcttagagcctcctgtgcagtgtagtgccagcaggtaacaatacagtattgtgcgcttacacatttgc i ponAbe2.chr19 C 0 I 848 s nomLeu3.chr10 102931936 265 - 106955855 TTTTTACATTAAGCGTGTGTCAG--TCGTAACTAGGAAAAACAAAATTA-TTTTTGTTTAAG----------AAAGTA----AAAAAAAATGGCCACCTATGAGGAGCTGGGAGTACAGGCTTAGGTGGAAACAGATAAGGTGTCAAGACCTCCTT-CTGTGACTGATCCCTGCACCTTTTCTCCCTG-Gagtttcagtcatgcaagatgaggg-agtcttagagcctcctgtgcagtgtagtgccagcaggtaacaatacagaactgtgtgcttacacatttgc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60199556 269 + 64156825 TTTTTACATT-AGCATGTGTTAG--TCGTAACTAGGAAAAACAAAATTATTTTTTGTTCAAG----------AAAATT-AAAAAAAAAAACAGCCACCTATGAGGAGCTGGGAGTACAGGCTTAGGTGGAAACAGATAAGGTGTCAAGACCTCCTT-CTGTGACTGATCCCTTCACATTTTCTCCCCACGagtttcagtcatgcaagatgagga-aacgcgagagcctcctagtcagtgcagtgccagcaggtaacaatacagtattgtacgcttacacatttgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55297897 268 + 59248254 tttttacatt-agcatgtgttag--tcgtaactaggaaaaacaaAATTATTTTTTGTTCAAG----------AAAATTAAAAAAAAAAAACAGCCACCTATGAGGAGCTGGGAGTACAGGCTTAGGTGGAAACAGATAAGGTGTCAAGACCTCCTT-CTGTGACTGATCCCTTCACATTTTCTCCCCACGagtttcagtcatgcaagatgagga-aacgcgagagcctcc--gtcagtgtagtgccagcaggtaacaatacagtattgtacgcttacacatttgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47395711 267 + 51301725 tttttacatt-agcATGTGTTAG--TCGTaactaggaaaaacaaaattattttttgtttaag----------aaaattttttaaaaaa---ggccacCTATGaggagctgggagtacaggcttaGGTGGAAACAGATAAGGTGTCAAGACCTCCTT-CTGTGACTGATCCCTTCACATTTTCTCCCCACGAGTTTCAGTCATGCAAGATGAGGA-AACGCGAGAGCCTCCTAGTCAGTGCAGTGCCAGCAGGTAACAATACAGTATTGTACGCTTACACATTTGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47092181 264 + 50890351 TTTTTACATT-AGCATGTGTTAG--TCGTAACTAGGAAAAACAAAATTATTTTTTGTTTAAG----------AAAATT----AAAAAAAACGGCCACCCATGAGGAGCTGGGAGTACAGGCTTAGGTGGAAACAGATAAAGTGTCAAGACCTCCTT-CTGTGACTGAACCCTTCACATTTTCTCCCCACGagtttcagtcatgcaggacgaaga-aacgcgagagcctca--gtcagtgcagtgccagcaggtaacaatacagtattgtacgcttacacatttgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3412047 259 - 49145316 TTTTTAAATTTAGTACGTGTTAGCCTCATAACTGGAAAAAATAAAATTA-TTTATACGTCAGGGGAAAAAATAAAATG----AAATAAAAGTGCCACCTCCAAGGAGCTGAGA---------------GGAACAGGCCAGGTACTAAGGTCTCTTTCCTGTGACTGACACCTCCTCATTGTCCCTCCC-GAGTTTCTCTCCTTTGAGGTGAGGACCGGCCCAGCATCTCT-----GGCACAgcgcctgcaggtaacaatgctgccttgggcccttacagatttgc i calJac3.chr22 I 1963 C 0 e canFam3.chr1 19785924 401 - 122678785 I a score=220398.000000 s hg38.chr19_GL949747v2_alt 368675 81 + 729520 tgagaagatagatcttttgttaagtgctctt-atcatcacaaattgatatgtggccataaaaatagtatcaaacaataataa s panTro4.chr19 59310434 81 + 63644993 tgagaagatagatcttttgttaagtgctctt-atcatcacaaattgatatgtggccataaaaatagtatcaaacaataataa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56200516 81 + 60714840 tgAGAAGACAGATCTTTTGTTAAGTGCTCTT-AACATCACAAATTGACATGTGGTCATAAAAATAGTATCAAATAATAATAA i ponAbe2.chr19 I 848 C 0 s nomLeu3.chr10 102932201 78 - 106955855 tgagaagatagatcttttgttaagtgctctt----atcacaAATTGATATGTGGTCATAAAAATAttatcaaacagtaataa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60199825 81 + 64156825 tgagaaggtagatcttttgttaagtgctctt-atcatcactaactgatatgtagtcatagaaatattatcaaacaataataa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55298165 81 + 59248254 tgagaaggtagatcttttgttaagtgctctt-atcaTCACTAACTGATATGTAGTCATAGAAATATTATCAAACAATAATAa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47395978 82 + 51301725 TGAGAAGGTAGATCTTTTGTTAAGTGCTCTTAATCATCACAAATTGATATGTGGTCATAGAAATATtatcaaacaataataa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47092445 81 + 50890351 tgagaaggtagatcttttgttaagtgctctt-atcatcacaaACTGATATGTGGTCATAGAAATTTTATCAAACAATAATAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3412306 81 - 49145316 tgagaaggtagatcttatgttaagtgtactt-ttcagcataaaTTGATATGTGATAACATAAATATTATTAAATACTAACAA i calJac3.chr22 C 0 I 88803 e canFam3.chr1 19785924 401 - 122678785 I a score=361703.000000 s hg38.chr19_GL949747v2_alt 368756 161 + 729520 tatacaaatagacgggaggaacctgtgagaggtggtggatgggtttatgtcgtaaactgtggtgttgacacacagggcatactcatctccaaactcatcaagtcgtatatgttaaataca---tactgctttttatatgtcaattattcctcgatagagTAAGG s panTro4.chr19 59310515 161 + 63644993 tatacaaatagacgggaggaacctgtgagaggtggtggatgggtttatgtggtaaactgtggtgttgacacatagggcatactcatctccaaactcatcaagtcgtatacgttaaacaca---tactgctttttatatgtcaattattcctcgatagagTAAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56200597 161 + 60714840 TATACAAACAGACGGGaggaagctgtgggaggtagcggatgggtttatgttgtaaactgtggtgttgacgcataggacatactcatctccaaactcatcaagtcgtgtatgttaaataca---tactgctttttatatgtcaattattcctcgatagagTAAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102932279 160 - 106955855 tatacaaaca----ggagcaacctgtgggaggtggtggttgagtttacgttgtaaactgtggtgttgacgcatagggcatactcgtctccaaactcatcacgtcgtatatgttaaatacatcctactgctttttatatgtcaattattcctcgatagagTAAGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60199906 161 + 64156825 tatacaaacagatgggaggaacctgtgggaggtggtggacgggtttatgccgtaaactgtggtgtggacacgcagggcatactcctctccaaactcctcaagtcgtatacgttaaataca---tactgctttttatatgtcaattattctttgatagagTAGGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55298246 161 + 59248254 tatacaaacagatgggaggaacctgtgggaggtggtggacgggtttatgccgtaaactgtggtgtggacgcgcagggcatactcctctccaaactcctcaagtcgtatacgttaaataca---tactgctttttatatgtcaattattcttcgatagagTAGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47396060 161 + 51301725 tatacaaACAGGTGGGAGGAACCTGTGGGAGGTGGTGGGCAGGTTTATGCCGTAAACTGTGGTGTGGACACGCAGGGCATACTCCTCTCCAAACTCCTCAAGTCGTATACGTTAAATACA---TACTGctttttatatgtcaattattCTTCGATAgagtaggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47092526 161 + 50890351 TATACAAACAGTGGGGTggaacctgtgggaggtggtggacgggtttatgccgtaaactgtggtgtggacacgcagggcatactcctctccaaactcaccaagtcgcatacgttaaataca---tactgcttttcatatgtcaattattcttcgacagagTAGGG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 3412387 88803 - 49145316 I a score=2221299.000000 s hg38.chr19_GL949747v2_alt 368917 913 + 729520 TTT-----------TTTTTTTTTTGTAATTGCAAGTGTCTGCAGAGAGCTTCTATAGGTTTGGGGGTCCGGGAGACTCCCATAGGTGTGC-CCCGTGAGCCTCAGCACCTAGGGTGTGTGTAGTGGCTATTCTGCCTTTATCTGTATTAAA-------TTTTTTAAAA---------------------------------ATTATTTTCCCAGGCATTCCACGAC-GCTCAACTTTTCACCCAAGTTCAAGTTCCTG-TTTTTTTCTTCACAGAAGTCGATTGTGGGCGCCAGTTCCCACATTGCTCTCATCCTAAGTAGCAGCAACTTGCGGGCTGATGCCTGTGTCCAGCCCTAGAAGAGCCTCCGTACCTAGAAGAAAACCTCCCCTCCTGGGAGTCACGGCGCAAGGCTGGGCTCCCATCCTCGCAGGGAGGGGC-GGATGCACCTGCCCCTGCAGATCTGCGCCCAGATCTGTGTTATCCACACCCACATCTGCGTCTGCAGGAAGAGGCTCCGCAGCAGGCAACA-GCTTCCATCTGCGAGCctcatttaatccccacgaggatcctgtagagggttcctatgttcacctctgttttatatatagacgaggacgctggctctgggaggagtaaAGCCGTGCAGCAGTAACTCCCG-----------------TGCAGCAGTAACTCCCGTGCAGCAGTAACTGCAGCCGTGCAGAGTAAACTCCCAGCACAGAACCCGGCCTCCCCGGTTCAGAAACAAAAGTGAGCTCCCTCCTCCCTGCTTGCGGGCGAAACTCTCGCTGCCTGTTGAACGTCTCCACCTGGATGC-CACGGCTTCCCCAGACTCCCAGTGCCCCCGGGCAACGCCTTCCTCTCTCCCCACCTTTCCAAATTTTCTCTGCAGCAAGTTTCCCTCCTCCAAGTTTCTCCCCCTTCTCCAGCCTTCACGTTCAGTCCCGTGTCTCTGTGCCGTACAGGAC s panTro4.chr19 59310676 935 + 63644993 TTT---GTTTTTTTTTTTTTTTTTGTAATTGCAAGTGTCTGCAGAGAGCTTCTATAGGTTTGGGGGTCCGGGAGACTCCCATAGATGTGC-CCCGTGAGCCTCAGCACCTAGGGTGTGTGTAGTGGCTATTCTGCCTTTATCTGtattaaa-------ttttttaaaa---------------------------------attattttCCCAGGCATTCCACAACCGCTCAACTTTTCGCCCAAGTTCAAGTTCCTG-TTTTTTTCTTCACAGAAGTCGATTGTGGGCGCCAGTTCCCACATTGCTGTCATCCTAAGTAGCAGCAACTTGCGGGCTGATGCCTGTGTCCAGCCCTAGAAGAGCCTCCGTACCTAGGAGAAAACCTCCCCTCCTGGGAGTCACGGCGCAAGGCTGGGCTCCCATCCTCGCAGGGAGGGGC-GGATGCACCTGCCCCTGCAGATCTGCGCCCAGATCTGTGTTATCCACACCCACATCTGCGTCTGCAGGAAGAGGCTCCGCAGCAGGCAACA-GCTTCCATCTGCGAGCctcatttaatccccacgaggatcctgtagagggttcctatgttcacctctgttttata----gacgaggacgctggctctgggaggagtaaggccgtgcagcagtaaCTCCCGCGCAGCAGTAACTCCCGTGCAGCAGTAACTCCCGTGCAGCAGTAACTGCAGCCGTGCAGAGTAAACTCCCAGCACAGAACCCGGCCTCCCCGGTTCAGAAACAAAAGTGAGCTCCCTCCTCCCCGCTTGCGGGCGAAACTCTCGCTGCCTGTTGAACGTCTCCACCTGGATGC-CACGGCTTCCCCAGACTCCCAGTGCCCCCGGGCAACGCCTTCCTCTCTCCCCACCTTTCCAAATTTTCTCTGCAGCAAGTTTCCCTCCTCCAAGTTTCTCCCCCTTCTCCAGCCTTCACGTTCAGTCCCGTGTCTCTGTGCCGTACAGGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56200758 876 + 60714840 TtttttgtttttgtttttgtttttTTAATTGCAAGTGTCTGCAGAGAGCTTCTATAGGTTTGGGGGT-CGGGAAATTCCCATAGGTGTGC-CCCGTGAGCCTCAGCACCTAGGGTGTGTGTAGTGGCTATTCTGCCTTTATCTGTATTGaa------ttttttttaaa---------------------------------attattttCCCAGGCATTCCACAACCGCTCAACTTTTCGCCCAAGTTCAAGTTCCTG-CTTTTTTCTTCACAGAAGTCGATTGTGGGCGCCAGTTCCCACATTGCTCTCATCCTAAGTAGCAGCAACTTGCGGGCTGATGCCTGTGTCCAGCCCTAGAAGAGCCTCCGTACCTAGAAGAAAACCTCCCGTCCTGGGGGTCACGGCGCAGGGCTGAGCTCCCATCCTCGCAGGGAGGGGC-GGATGCACCTGCCCCTGCAGATCTGTGTCCAGGTCTGTGTTATCCACACCCACATCTCCGTCTGCAGGAAGAGGCTCCGCAGCAGGCAACA-GCTTCCATCTGCGAGCctcatttaatccccacgaggatcctgtagaggtttcctatgttcacctctgttttata----gacgaggacgctggctctgggaggagtaaAGCCGTGCAGCAGT--CCCCCG------------------------------------------------------------GTAAACTCCCAGCACAGAACCCGGCCTCCCCGGTTCAGAAACAAAAGTGAGCTCCCTCCTCCCTGCTTGCCGGCGAAACTCTCGCTGCCTGTTGAACGTCTCCACCTGGATGC-CGCGGCTTCCCCAGACTCCCAGTGCCCCCGGGCAACGCCTTCCTCTCTCCCCATCTTTCCAAATTTTCTCTGCAGCAAGTTTCCCTCCTCCAAGTTTCTCCCCCTTCTCCAGCCTTCACGTTCAGTCCCGGGTCTCTGTGCCGCACAGGAC i ponAbe2.chr19 C 0 I 631 s nomLeu3.chr10 102932439 869 - 106955855 TGt------tttttttttttttttttAATTGCAAGTGTCTGCAGAGAGCTTCTATAGGTTTGGGGGT-CGGGAAATTCCCATAGGTGTGC-CCCGTGAGCCTCAGCACCTAGGGTGTGTGTAGTGGCTATTCTGCCTTTATCTGTATTAAA-------TTTTTTTAAA---------------------------------ATTATTTTCCCTGGCATTCCGCAACCGCTTAACTTTTCACCCAAGTTAAAGTGCCTG-CTTTTTTCTTCACAGAAGTCGATTGTGGGCGCCAGTTCCCACATTGCTGTCATCCTAAGTAGCAGCAACTTGCGGGCTGATGCGTGTGTCCAGCCCTAGAAGAGCCTCCGTACCTAGAAGAAAACCTCCCCTGCTGGGAGTCACGGTGCAGGGCTGGGCTCCCACCCTCGCAGGGAGAGGC-GGATGCACCTGCCCCTGCAGATCTGCGTCCAGGTCTGTGTTACCCACACCCACATCTGCGTCTGCAGGAAGAGGCTCTGCAGCAGGCGACA-GTTTCCATCTGCAAGCCTAGtttaatccccacgaggatcctgtggagggttcctatgttcacctctgttttata----gacgaggacgctggctctgggaggagtgaAGCCGTGCAGCAGT--CCCCAG------------------------------------------------------------GTAAACTCCCAGCACAGAACCCGGCCTCCCCAGTTCAGAAACGAAAGTGAGCTCCCTTCTCCCCGCTTGCGGGCGAAACTCTCGCTGCCTGTCGAACATGTCCACCTGGATGC-CACGGCTTCCCCAGACTCCCAGTGCCCCCGGGCAACGCCTTCCTCTCTCCCCACCTTTCCAAATTTTCTCTGCAGCAAGTTTCACTCCTCCAAGTTTCTCCCCCTTCTCCAGCCTTCACGTTCAGTCCCGTGTCTCTGTGCCGCACAGGAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60200067 867 + 64156825 TTTTTTGTTTTTGG--TTTTTTTTTTAATTGCAAGTGCCTGCAGAGAGCGTCTATAGGTTTGAGAGTCTGGGAGATTCCCGTAGGTGTGG-CCCGTGAGCCTCAGCACCTAGGGTGTGTGTCGTGGCTCTTCTGCCTTTATCTGtattaaa------tttttttaaaa---------------------------------attattttCCCAGGCATTCCGCAACCGCTCAACTTTCTGCCCAAGTTCAAGTTCCTG-TTTTTTCCTTCACAGAACTCGATTGCGGGTGCCAG-CCCCACATTGCTCTCCTCCTAAGTGGCAGCAACTTGTGGGCTGATGCGTGTGTCCAGGCCTAGAGGGGCCTCGGTACCCAGAAGAAAACCTCCCCTGCCGGGCGTCACGGCGCAGGGCTGGGCTCCCGTCCTCGCAGGGAGGAGA-GGGTGCACCTGCCCCTACAGGTGTGCGCCCAGGTCTGTGTTATCCACACGCACATCTGCGTCTGCAGGAACAGGCTCCACAGCAGGCAACC-GCTTCCATCTTCGAGCctcatttaatccccacgaggatcctgtaaagggttcctatgctcacctccgtgttata----ggcgaggacgctggctctgggaggagtaaAGCCGGGCAGCAGT--CCCCAG------------------------------------------------------------GTAAGCTCCCAGCACAGAACCCGGCCTCCCCAGTTCTGTAACAAAAGGGGGCTCCCT-CTGCCCGCTTGCCGGTGACACTCTCACTGCCTGTCAAACGTCTC-------ATGCTCACGGCTTCCCCAGACTCGCGGTCCCCCCGGGCAGCGCCTTCCTCTCTCCCCACCTTTCCTCATTTTCTCTGCAGAAGGTTTCACTCCTCCAAGTTTCTCCCCCTTCTCCAGCCTTCACGTTCAGTCCCGTGTCCCTGTGCAGTAAGGGAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55298407 846 + 59248254 ttttttgtttttgg-tttttttttttAATTGCAAGTGCCTGCAGAGAGCGTCTATAGGTTTGAGAGTCTGAGGGATTCCCGTAGGTGTGG-CCCGTGAGCCTCAGCACCTAGGGTGTGTGTCGTGGCTCTTCTGCCTTTATCTGTATTAAA------TTTTTTTAAAA---------------------------------ATTATTTTCCCAGGCATTCCGCAACCGCTCAACTTTCTGCCCAAGTTCAAGTTCCTGTTTTTTTCCTTCACAGAACTCGATTGCGGGTGCCAGCCCCCACATTGCTCTCCTCCTAAGTGGCAGCAACTTGTGGGCTGATGCGTGTGTCCAGGCCTAGAGTAGCCTCGGTATCGA------------------------TCACGGCGCAGGGCTGGGCTCCCGTCCTCGCAGGGAGGAGA-GGGTGCACCTGCCCCTACAGGTGTGCGCCCAGGTCTGTGTTATCCACACGCACATCTGCGTCTGCAGGAACAGGCTCCACAGCAGGCAACC-GCTTCCATCTTCGAGCctcatttaatccccacgaggatcctgtaaagggttcctatgttcacctccgtgttata----ggcgaggacgctggctctgggaggagtaaAGCCGGGCAGCAGT--CCCCAG------------------------------------------------------------GTAAGCTCCCAGCACAGAACCCGGCCTCCCCAGTTCTGTAACAAAAGGGGGCTCCCT-CTGCCCGCTTGCCAGTGACACTCTCACTGCCTGTTAAACGTCTC-------ATGCTCACGGCTTCCCCAGACTCGCGGTCCCCCCGGGCAGCGCCTTCCTCTCTCCCCACCTTTCCTCATTTTCTCTGCAGCAGGTTTCACTCCTCCAAGTTTCTCCCCCTTCTCCAGCCTTCACGTTCAGTCCCGTGTCTCTGTGTGGTAAGGGAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47396221 869 + 51301725 ttttttgtttttgt-tttttgtttttaattgcaaGTGCCTGCAGACAGCGTCTATAGGTTTGAGAGTCTGGGAGATTCCCGTAGGTGTGA-CCCGTGAGCCTCAGCACCTACGGTGTGTGTCGTGGCTCTTCTGCCTTTATctgtattaaa------ttttttaaaaa---------------------------------attattttcccaggCACTCCGCAACCGCTCAACTTTCCGTCCAAGTTCAagttcctg-tttttttcttcacagaactCGATTGCGGGTGCCAGTCCCCACACTGCTCTCCTCCTAAGTGGCAGCAACTTGTGGGCTGATGCGTGTGTCCAGGCCTAGAGGAGCCTCGGTACCCAGAAGAAAACCTCCCCTCCTGGGCATCACGGCGCAGGGCTGGGCTCCCGTCCTCGCAGGGAGGAGA-GGGTGCACCTGCCTCTACAGGTGTGCGTCCAGGTCTGTGTTATCCACAAGGACATCTGCGTCTGCAGGAACAGGCTCCACAGCAGGCAACG-GCTTCCATCTTCGAGCCTCATTTAATCCCCACGAGGATCCTGTAAAGGGTTCGTATGTTCACCTCTGTGTTATA----GGTGAGGACGCTGGCTCTGGGAGGAGTAAAGCTGGGCAGCAGT--CCCCAG------------------------------------------------------------GTAAACTCCCAGCACAGAACCCGGCCTCCCCAGTTCTGTAACAAATGTGGGCTCCCT-CTGCCCGCTTGCCGGTGACACTCTCACTGCCTGTTAAACATCTC-------ATGCTCACAGCTTCCCCAGACTCGCGGTCCCCCTGGGCAGcgccttcctctctccccacctttcctcattttctctgcaGCAGGTTTCACTCCTCCAAGTTTCTCCCCCTTCTCCAGCCTTCGCGTTCAGTCCCGTGTCCCTGTGCAGTAAGGGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47092687 862 + 50890351 ttttttgtttttg----tttttttttAATTGCAAGTGCCTGCAGAGAGCTTCTATAGGTTTGAGAGTCTGGGAGATCCCCGTAGGTGTGACCCCGTGAGCCTCAGCACCTAGGGTGTGTGTCGTGGCTCTTCTGCCTTTATATGTATTAAA------TTTTTTAAAAA---------------------------------GTTATTTTCCCAGGCATTCCGCAACCGCTCAACTTTCCACCCAAGTTCAGGTTCCTG-TTTTTTCCTTCAGAGAACTCGATTGTCGGTGTCAGCCCCCACATTGCTCTCATCCTAACTGGCAGCAACTTGTGGGCTGATGCGTGTGTCCAGGCCTAGAGGAGCCTCGGTACCCAGGAGAAAACCTCCCCTCCTGGGAGTCACGGCGCAGGGCTGG------GTCCTCGCAGGGAGGAGAGGGGTGCACCTGCCCCTACAGGTCTGCGCCCAGGTCTGTGTTATCCACACGCACATCTGCGTCTGCAGGAACAGGCTCCACAGCAGGCAACG-GCTTCCATCTTTGAGCctcatttaatccccacgaggatcctgtaaagggttcctatgttcgcctctgtgttata----ggtgaggacgctggctctgggaggagtaaAGCCGGGCAGCAGT--CCCCAG------------------------------------------------------------GTAAACTCCCAGCACAGAACCCGGTCTCCCCAGTTATGTAACAAAAGTGGGCTCCCT-CTGCCCGCTTGCCGGTGACACTCTCACTGCCTGTTAAACATGTC-------ATGCTCACGGCTTCCCCAGACTCCCGGTCCCCCCGGGCAGCGCCTTCCTCTCTCCCCACCTTTCCTCATTTTCTCTGCAGCAGGTTTCACTCCTCCAAGTTGCTCCCCCTTCTCCAGCCTTCACGTTCAGTCCCGTGTCTCTGTGCAGTAAGGGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45618323 850 + 49145316 -----------tttttattttttttaaaCTGTAAGTGTCTGCAGAAAATGTC--CAGGTTTGTGGAGTCGTGAGATTCCCACAGGTGTGT-CCTGTGAACCTCAGCACCTGGGGTGTGTGTGGTGGCTCTTCTGCCTTTATCTGTATTAAACTTTTTTTTTTTTAAAAAAAGCTCTTTTCTTAAGACTACTATCAGTTCTCATTATTTTCCCAGACATTCTGCAACTGCTCAACTTTTCACTCAAGTTCAAGTTCCTC-TTTTTTTCTTCCGGGAGCTCGATTGTGGGCGCCAGTTCGCACATTGCCCTCACCCTAAGTAGCAGCAACTTGCCAGCTGATGCATGAGCCC-----------GGCCTCTGTACC-AGAAGGGAGCCTGCCCTCCTAGGAGTCGGGGCGCAGGGCCGGGCTCC-ATCCTCGCAGGGAGGGGC-TGGTGCACCTGC--------------GCCCCGGTCTGCGCCATCCACAC-CGCACGTGCGTCTGCAGGAGCAGGCTCGGCAGCAGGcaacgtgcttccacctgcgagctca--tgaatccccacgaagatcccgtaaagggtgactgtgttcgcctctgttttata----gaggaggacgctggcccttggaggggtaaagCCACGCGG-AGT--CCCCTG------------------------------------------------------------GGAAACTCCTGGCACCGAACCAGG------CAGTTCAGTGACAAAAGTGAGCTCCCC-GCTCCCGCTTGCGGGTGAAACCCCCACTGCCCGTCCAGCATCTCCCCCTGGAGACTCCCGGTCCCCC-----------TCCCCC----CAACACCTTCCTCTCT--CCACGTGTCCTCAGTTTCTCTGCAGCAAGTTTCTTCCTTCCACGTTCCTCCCTCTTCTGCAGCCTTCACGTTCAGTCCTGTGTCTCTGCGCTGTGCAGGAC i calJac3.chr22 I 9231 C 0 e canFam3.chr1 19785924 401 - 122678785 I a score=398805.000000 s hg38.chr19_GL949747v2_alt 369830 140 + 729520 TCAGCTGCCATAACAGCAGCTGGCGTCTCAGCGCCCCCGGAAGCTGAGACTTTCCAGGACAAGAACTGCTTTGGAGTCCTC-TCGGGCCCCAGCACGACCTGCTACACTGCAAACTACTGCAAAGAACCTTTCAAGACTGG s panTro4.chr19 59311611 140 + 63644993 TCAGCTGCCATAACAGCAGCTGACGTCTCAGCGCCCCCGGAAGCTGAGACTTTCCAGGACAAGAACTGCTTTGGAGTCCTC-TCGGGCCCCAGCACGACCTGCTACACTGCAAACTACTGCAAAGAACCTTTCAAGACTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56202265 140 + 60714840 TCAGCTGCCATAACACCAGCTGACGTCTCAGCACCCCGGAAAGCTGAGACTTTCCAGGACAAGAACTGCTTTGGAGTCCTC-TCGGGCCCCAGCACGACCTGCTACACTGCAAACTACTGCAAAGAACCTTTCAAGACTGG i ponAbe2.chr19 I 631 C 0 s nomLeu3.chr10 102933308 140 - 106955855 TCAGCTGCCATAATACCAGCTGACGTCTCAGCACCTCCCAAAGCTGAGACTTTCCAGGACAAGAACTGCTTTGGAGTCCTC-TTGGGCCCCAGCACGACCTGCTACACTGCAAACTACTGGAAAGAACCCTTCAAGACTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60200934 140 + 64156825 TCAGCTGCCTTAACACCAACGGACGTCTCAGCACCCCCAAAAGCTGAGACTTCCCAGGACAAGAACTGCTTTGGAGTCCTC-TCGGGACCCAGCCCGACCTGCCACACTGCAAACTACTGGAAAGAACCTTTCAAGACTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55299253 140 + 59248254 TCAGCTGCCTTAACACCAACGGACGTCTCAGCACCCCCGAAAGCTGAGACTTCCCAGGACAAGAACTGCTTTGGAGTCCTC-TTGGGACCCAGCCCGACCTGCCACACTGCAAACTACTGGAAAGAACCTTTCAAGACTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47397090 140 + 51301725 TCAGCTGCCTTAACACCAACGGACGTCTCAGCACCCCGGAAAGCTGAGACTTCCCAGGACAAGAACTGCTTTGGAGTCCTC-TCGGGCCCCAGCCTGACCTGCCACACTGCAAAttactagaaagaacctttcaaGACTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47093549 140 + 50890351 TCAGCTGCCTTAACACCAACGGACGTCTCAGCACCCCCGAAAACTCAGACTTCCCAGGACAAGAACTGCTTTGGAGTCCTC-TCCGGACCCAGCCCGACCTGCCACACTGCAAACTACTGGAAAGAACCTTTCAAGACTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45619173 140 + 49145316 CCAGCTGCCATAACACCAGCTCACGTCTCAGCGCCCC-GAAAGCTGAGACCATCCAGGACATGCCCAGCTTTGGAGTCCTCTTCAGGCCCCAGCACCGCCTGCTACACCGCGCACTTCTAGAAAGAACCTTTCGAGACTGG i calJac3.chr22 C 0 I 332 e canFam3.chr1 19785924 401 - 122678785 I a score=1776282.000000 s hg38.chr19_GL949747v2_alt 369970 672 + 729520 AGAGATGGAGCACCCCAAGTCTGTTTTACAGATGGAAA-GGTGGTGGCTCAAAGACGAGATACCacaata----acagtggctatgaagctctcgctttgtcaagatacagttcaaagcactgggcatgcactgactcatctcacgacccctaaaacactcacgttggatactattgctactcctcttaccaacgcagaaacagcgtcacagcaaagttaagcagcttgcccaaagatcctccgctaggaagggaagaa---ggtggcctttgaacttgag-ctccccatccacagtctgcagtccttcagactggagcacattgTAGAAATTAACAATGTCATCCCAACAACCCTTATAAAACACTTTTGggccgggcgcggtggctcacgcctgtcatcccagcacttcggaaggccgaggcaggtggatcacctgaggt---gagttcgagaccagccttaccaacaaggtgaaaccctgtccctactaaaaatacaaaaa-ttagccgggcgtggtggctggcgcctgtagtcccagctactcgggaggctaaggcaggagaattccttgaacccgcgaggtggaggttgcagtgagccgagatcgtgccactgcactccagcctgggcgat-ggagcgagactccatctca----------aaaac---------------aaaacaa----aacaaaaca--------------------------aaaaaCACT s panTro4.chr19 59311751 671 + 63644993 AGAGATGGAGCACCCCAAGTCTGTTTTACAGGTGGAAA-GGTGGTGGGTCAAAGACGAGATACCacaataacagacagtggctatgaagctctcgctttgtcaagatacagttcaaagcactgggcatgcactgactcatctcacgacccctaaaacactcacgttggatactattgttactcctcttaccaacacagaaacggcgtcacagcaaagttaagcagcttgcccaaagatcctccgctaggaagggaagaa---ggtggcctttgaacttgag-ctccccatccacagtctacagtccttcagactggagcacattgTAGCAATTAACAATGTCATCCCAACAACCCTTATAAAACACCTTTGggccgggcgcggtggctcacgcctgtcatcccagcacttcggaaggccgaggcaggtggatcacctgaggt---gagttcgagaccagccttaccaacaaggtgaaaccctgtccctactaaaaatacaaaaa-ttagccgggcgtggtggctggcgcctgtagtcccagctactcgggaggctaaggcaggagaattctttgaacccacgaggtggaggttgcagtgagccgagatcgtgccactgcactccagcctggacgat-ggagcgagactccatctca------------------------------aaaacaa----aacaaaaca--------------------------aaaaaCACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56202405 686 + 60714840 AGAGATGGAGCACCCCAAGTCTATTTTATAGATGGAAA-GGTGGGGGGTCAAAGAGGAGATGCCacaataacagacagtgactatgaaactctcgctttgtcaagatacagatcaaagcactgggcacgcactgactcatctcacgatccctaaaacactcacgttagacactattgttattcctcttaccaatggggaaactgagtcacagcaaaattaagcaacttgcccaaagatcctcagctaggaagggaagaa---ggtggcctttgaacttgag-ctccccatccacagtctgcagtccttcagactggagcacattgTAGAAATTAACAATGTCATCCCAACAACCCTTATAAAACACTTTTGggccgggcgtggtggctcatgcctgtcatcccagcacttcgggaggccgaggcaggtggatcacctgaggt---gagttcgagaccagccttaccaacaaggtgaaaccctgtctctactaaaaatacaaaaa-ttagccgggtgtggtggcaggcgcctgtagtcccagctactcgggaggctgagacaggagaattccttgaacccgcgaggcggaggttgcagtgagccgagattgtgccactgcactccagcctgggcgat-ggagcaagactccatctcaaaaacaaaacaaaac---------------aaaacaa----aacaaaaca--------------------------aaaAACACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102933448 661 - 106955855 AGAGATTGAGCACCCCAAGTCTATTTCACAGATGGAAA-GGTGGTGGGTCAAAGAGGAGATACGACAATG----ACAGTGACtatgaagctctcgctctgtcaagatacagttcaaagcactgggcatgcactgacccatctcacgacccctaaaacactcacgttagatactattg---------ttaccaatgcggacacagc--cccagcaaagttaagcaacttgcccccagatcctcagctaggaagcgatgaa---gctggcctttgaacttgag-ctccccatccacagtctgcagtccttcagactggagcacattgTAGAAATTAACAATGTCATCCCAACAACCCTTATAAAACACTTTTGggccaggtgccgtggctcacgcctgtcatcccagcacttcgggaggccgaggcaggtggatcacctgaggt---gacttcgagaccagccttaccaacaaggtgaaaccccgtctctactaaaaatacaaaaa-ttatgcgggcgtggtggcaggcgcctgtagtcccagctactcgggaggctgagacaggaggattccttgaacccacgaggcagagctttcagtgagccgacattgtgccactgcactccattctgggcgat-ggagcgagactccatatca----------aaaac---------------aaaacaa----aacaaaaca--------------------------aaaaaCACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60201074 679 + 64156825 CGAGATTGAGCGCCTCAAGTCTATTTTACAGATGGAAA-GGTGGTGGGTCAAAGAGGAGATACCATCATAATGGACAGAGACtatgaaactctcgctttgtcaagatacagttcaaagcactggacatgcattgactcatctcactacccctaaaacactcacgtcagatactgtcgttattcctcttacaaatggggaaactgagccacagcaaagttaagcaacttgcccgaagatcctcagctaggaagggatgaa---ggtggcctttgaacttgag-ctccccatccacagtctgCAGTCCCTC-----GGAGCACATTGTAGAAATTAATAATGTCATCCTAACAACCCGTATAAAACACTTTTGggccgggcgcggtggctcacggctgtcatcccagcacttcgggaggctgaggcaggcggaccacctgacgt---gagttcgagaccagccttaccaacaaggtgaaaccctgtctctactaaaaatacaaaaa-ttaaccgagtgtggtggcgggcacctgtagtcccagctactcgggaagctgaggcaggagaattccttgaacccgcgaggcagaggttgcagtgagccgagatcgcgccactacactccagcctgggcgaa-ggagcaaggctccagctca----------aaaaCACAC-----------acaacaacaacaacaacaac--------------------------aaaaacaCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55299393 684 + 59248254 CGAGATTGAGCGCCTCAAGTCTATTTTACAGATGGAAA-GGTGGTGGGTCAAAGAGGAGATACCATCATAATGGACAGAGACtatgaaactctcgctttgtcaagatacagttcaaagcactggacatgcattgactcatctcactacccctaaaacactcacgtcagatactgtcgttattcctcttacaaatggggaaactgagccacagcaaagttaagcaacttgcccgaagatcctcagctaggaagggatgaa---ggtggcctttgaacttgag-ctccccatccacagtctgCAGTCCCTC-----GGAGCACATTGTAGAAATTAATAATGTCATCCTAACAACCCGTATAAAACACTTTTGggccgggcgcggtggctcacggctgtcatcccagcacttcgggaggccgaggcaggcggaccacctgaggt---gagttcgagaccagccttaccaacaaggtgaaaccctgtctctactaaaaatataaaaa-ttaaccgagtgtggtggcgggcacctgtagtcccagctactcgggaagctgaggcaggagaattccttgaacccgcgaggcagaggttgcagtgagccgagatcgtgccactacactccagcctgggcgaa-ggagcaagactccagctca----------aaaaCACACAC------acaacaacaacaacaacaacaac--------------------------aaaaacaCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47397230 687 + 51301725 CGAGATTGAGCGCCTCAagtctattttacagatggaaa-ggTGGTGGGTCAAAGAGGAGATACCATCATAATGGACAGAGACTATGAAACTCTCGCTTTGTCAAGATACAGTTCAAAGCACTGGACATACATTGACTCATCTCACTACCCCTAAAACACTCACGTCAGATACTGTCGTTATTCCtcttacaaatggggaaactgagccacagcaaagttaagcaacttgcccgaAGATCCTCAGCTAGGAAGGGATGAA---GGTGGCCTTTGAACTTGAG-CTCCCCATCCGCAGTCTGCAGTCCCTC-----GGAGCACATTGTAGAAATTAATAATGTCATCCTAACAACCCGTATAAAACACTTTTggcccgggtgcggtggctcacggctgtcatcccagcacttcgggaggccgaggcaggcggaccacctgaggt---gagttcgagaccagccttaccaacaaggtgaaaccctgtctctactaaaaatacaaaaa-ttaaccgagtgtggtggcgggcacctgtagtcccagctacttgggaagctgaggcaggagaattccttgaacccgcgaggcagaggttgcagtgagccgagattgtgccactacactccagcctgggcgat-ggagcaagactccagctca----------aaaacacacacac---aacaacaacaacaacaacaacaac--------------------------aaaaacatg i papAnu2.chr19 C 0 I 656 s chlSab2.chr6 47093689 684 + 50890351 CGAGATTGAGCACCTCAAGTCTATTTTACAGATGGAAA-GGTGGTGGGTCAAAGAGGAGATACCatcataatggac--agactatgaaactctcgctttgtcaagatacagttcaaagcactggacatgcattgactcatctcactacccctaaaa----cgcattagatactgtcgttattcctcttacaaatggggaaactgagccacagcaaagttaagcaacttgcccgaagatcctcagctaggaagggatgaa---ggtggcctttgaacttgag-ctccccatccacagtctgCAGTCCCTC-----GGAGCACATTGTAGAAATTAATAATGTCATCCTAACAACCCGTATAAAACACTTTTGggctaggcgcagtagctcacggctgtcatcccagcacttcgggaggccgaggcaggtggactacctgaggt---gagtttaagaccagccttaccaacaaggtgaaaccctgtctctactaaaaatacaaaaa-ttaaccaagtgtggtggcgggcacctgtagtcccagctactcgggaggctgaggcaggagaattccttgaacccgcgaggcagaggttgcagtgagccgagatcgtgccactacactccagcctgggcgat-ggagcaagactccagctca----------aaaacacacacacaaaaacaacaacaaCAGCAACAACAAC--------------------------AAAAACACG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45619645 685 + 49145316 AGAGACGGAGGGCCCCAAGTCCGTTTTCCAGATGCAAAGGGCAGCAGGTGGAAGAGGAGAGACCGTCA------ACATACACCGTGAAg--ctcactttgtcaagatactgggcaaagcacttggcatgcactgactcatcttactgcccctaaaacactcatgttagacac--ttgctactcctcttacaaatggggaaactgagtcacagcaaaattaagccacttgcccaaagatcttcagccaggaagggatgaaggtggtggcgtttaaacttgggcccccccatccacagtctgcagacactcagactgcagcacattgTAGAAATTCACAGTGCC-----------------------------Tgccgggcgccttgactcaagcctgtaatcccagccctttgggaggccgaggcgggtggatcac--gaggtcaagagatcgagaccatcctggtctacaaggtgaaaccccgtctctactaaaaatacaaaaagttagctgggcatggtggcgcgtgcctgtaatcccatctactcaggaggctgaggcaggagaattgcctgaacccaggaggcggaggttgcggtgagccgagatcgcgccattgcactccagcctgggtaacaagagcgaaactccgtctca----------aaaaaaaaaaaaaaa-----aaaaaaaaaagaaCAAGAAATTCACAGTGCCATCCCAATAAGCCTTAAAAGCACT i calJac3.chr22 I 332 C 0 e canFam3.chr1 19785924 401 - 122678785 I a score=401551.000000 s hg38.chr19_GL949747v2_alt 370642 139 + 729520 TTTGAGTTCTGACTTTATTTCTTGCTGTTTTCTTATTTTTCATGGAACTCATCTTAATGATTTCACGTTTACCAATCACGTATATTTGGACGTGATTACAGGGCCACAGGGCAACCTCCAGAAGCATGATTCCTTTCCT s panTro4.chr19 59312422 139 + 63644993 TTTGAGTTCTGACTTTATTTCTTGCTGTTTTCTTATTTTTCATGGAACTCATCTTAATGATTTCACGTTTACCAATCATGTATATTTGGACGTGATTACAGGGCCACAGGGCAACCTCTAGAAGCATGATTCCTTTCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56203091 139 + 60714840 TTTGAGTTCTGACTTTATTTCTTGCTGTTTTCCTACTTTTCATGGAACTCATGTTAATGATTTCACGTTTACCAATCACGTATATTTGGACATGCTTTCATGGCCACAGGGCAAACTCTAGAAGCATGATTCCTTTCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102934109 139 - 106955855 TTTGAGTTCTGACTTTATTTCTTGCTCTTTTCTTATTTTTCATGGAACTCATCTTAATGATTTCACGTTTACCAATCACGTATATTTGGACATGATTACACGGCCACAGGGCAACCTCTAGAAGCTTGATTCCTTTCCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60201753 139 + 64156825 TTTGAGTTCTGACTTTATTTCTTACTCTTTTCTTATTTTTCACGGAACTCATCTTAATGATCTCATGTTTACCATTCACGTATATTTGGACGTGATTACATGGCCACAGGGCAACCTCTATAAGCACGAGTCCTTTCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55300077 139 + 59248254 TTTGAGTTCTGACTTTATTTCTTACTCTTTTCTTATTTTTCACGGAACTCATCTTAATGATCTCATGTTTACCATTCACGTATATTTTGACGTGATTACATGGCCACAGGGCAACCTCTATAAGCACGAGTCCTTTCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47398573 139 + 51301725 TTTGAGttctgactttatttcttactcttttcttatttttcacgGAACTCATCTTAATGATCTCATGTTTACCATTCACGTATATTTGGACGTGATTACACGGCCACAGGGCAACCTCTATAAGCACGAGTCCTTTCTT i papAnu2.chr19 I 656 C 0 s chlSab2.chr6 47094373 139 + 50890351 TTTGCGTTCTGACTTTATTTCTTGTTCTTTTCTTATTTTTCACGGAACTCATCTTAATGATCTCATGTTTACCATTCACGTATATTTGGACGTGATTACACGGCCACGGGGCAACCTCTATAAGCACGAGTCCTTTCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45620330 139 + 49145316 TCTGAGTCCTGACTCTATTTCTTGCTCTTTTCTTATTTTTCACGGGACTCATCTTAATAATTTCACCTTTACCATTCAGGTATATTTGGACACTGTTACATGGCCACAGGGCAACCTCTAGAAGCATGAtttctttttt i calJac3.chr22 C 0 I 2522 e canFam3.chr1 19785924 401 - 122678785 I a score=597602.000000 s hg38.chr19_GL949747v2_alt 370781 254 + 729520 AAGAATGAGGAAGGATGTGGTCAGTGTGTTCCTAAAATTATGATACTGCTTTGTAAGATAACATGTtttgttcgttttatttcatctttttattttgaaacagagtctcactctgtcacccagcctggagtgcagtggagcaatctcaattcactgcag----cctctgcctcctgggctcaagccatcctctcaccttggccccccaagtagctgggactataggcacacatcaccatacccagttaatttttgtat s panTro4.chr19 59312561 254 + 63644993 AAGAATGAGGAAGGATGTGATCAGTGTGTTCCTAAAATTATGATACTGCTTTGTAAGACAACATGTtttgttcattttatttcgtctttttattttgaaacagggtctcgctctgtcacccaggctggagtgcaatggagcaatctcaattcactgcag----cctctgcctcctgggctcaagccatcctctcaccttggccccccaagtagctgggactataggcacacatcaccacacccagttaatttttgtat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56203230 254 + 60714840 AAGAATGAGGAAGGATGTGGTCAGTGTGTTCCTAAAATTATGATACTGCTTTGTAAGATAACATGTtttgttcattttatttcgtctttttattttgaagcagggtctcgctctgtcacccaggctggagtgcagtggagcaatctcaattcactacag----cctctgcctcctgggctcaagccatcctctcaccttggccccccaagtagctgggactataggcacacatcaccccacccagttaatttttgtat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102934248 254 - 106955855 AAGAATGAGGAAGGATGTGGTCAGTGTGTTCCTAAAATTATGATACTGCTTTGTAAGATAACATATtttgttcgttttattttgtctttttattttgaaacagggtcttgctctgtcacccaggctggagtgcagtggagcaatctcaattcactgcag----cctctgccttctgggttcaagccatcctctcaccttggccccccaagtagctgggactataggcacacatcaccacacccagttaagttttgtat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60201892 213 + 64156825 GAGAAGGGGGAAAGATGTAGTCAGTGTGTTCCTAAAATTACGATACTGCTTTGTAAGATAACATGTTTTGTTCATTTTATTTC-------------------------------GTAATCCAGATATGAAGgcagtggagcaatctcaattcactgcag----cctttgcctcctgggctcaatatatcctctcgactt----------gtagctggggctataggcacacaacaccacacccagttaatttttgtag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55300216 213 + 59248254 GAGAAGGGGGAAGGATGTAGTCAGTGTGTTCCTAAAATTACGATACTGCTTTGTAAGATAACATGTTTTGTTCATTTTATTTC-------------------------------GTAATCCAGATATGAAGgcagtggagcaatctcaattcactgcag----cctttgcctcctgggctcaagctatcctctcgcctt----------gtagctgggactataggcacacaacaccacacccagttaatttttgtag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47398712 213 + 51301725 AAGAAGGGGGAAGGATGTAGTCAGTGTGTTCCTAAAATTACGATACTGCTTTGTAAGATAacatgttttgttcattttatttc-------------------------------gtAATCCAGATATGAaggcagtggagcaatctcaattcactgcag----cctttgcctcctgggctcaagctatcctctcgcctt----------gtagctgggactataggcacacaacaccacacccagttaatttttgtag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47094512 213 + 50890351 AAGAAGGAGGAAGGATGTAGTCAGTGTGTTCCTAAAATTACGATACTGCTTTGTAAGATAACATGTTTTGTTCATTTTATTTC-------------------------------GTAATCCGGATATGAAGgcagtggagcaatctcaattcactgcag----cctttgcctcctgggctcaagctatcctctcacctt----------gtagctgggactataggcacacaacaccacacccagttaattattgtag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45622991 241 + 49145316 AAGAATGAAGAAGGATGTGGTCAGTGTGTTCCTAAAATTATGATACTGCTTTGTCAGATAACAtttctttttcctttt-----------------tgagttagggtctcactctggcacccaggctggagtgcagtggagcaatctcggttcactgcagtctctctctgcctcttgggctcaagccatcctcccacctcagccccccaagtagctgggactataagcactcaccaccacgcctggataatttttgttt i calJac3.chr22 I 2522 I 13 e canFam3.chr1 19785924 401 - 122678785 I a score=1028034.000000 s hg38.chr19_GL949747v2_alt 371035 457 + 729520 tttttgtagagctagggtttcaccatgttgcccaggctgttctcaaactcccaaactcaagcaatccacccaccttggcttcccaaagtgctgggattacaggcgtgagccactgcacctggccCAATTTTATTTC------TTATTATTTTGCATGCCATTGTGAATGTatgaagtgtttctctctttatttagatctttaatttccctcagcaatcttttgtagttcttagtgtacacatcttgcatttctttattaaattggtttctattcattttattatttttgaggctttgtaaataaaattgctctcctaatttcattattgaattatttttgtcagtatatagacatatgattgattttagtGAATATGTCTTCATCGTGCTAGGATTTTTGTTGTTGTTGCTGCTGttgttgttattgttgagacagagtttcgctcttgttgcccaggctgga s panTro4.chr19 59312815 457 + 63644993 tttttgtagagctagggtttcaccatgttgcccaggctgttctcaaactcccaaactcaagcaatgcacccaccttggcttcccaaggtgctgcgattacagacgtgagccactgcacctggccCAATTTTATTTC------TTATTATTTTGCATGCCATTGTGaatgtatgaactgtttctgtctttatttagatctttaatttccctcagcaatcttttgtagtttttagtgtacacaccttgcatttctttattaaattggtttctattcattttattatttttgaggctttgtaaataaaattgctctcctaatttcattattgaattatttttgtcagtatatagacatatgattgattttagtGAATATGTCTTCATCGTGCTAGGATTTttgttgttgttgctgctgttgttgttattgttgagacagagtttcgctcttgtcgcccaggctgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56203484 451 + 60714840 tttttgtagagctagggtttcaccatgttgcccgggctgttctcaaactcctaaactcaagcaatccgcccaccttggcttcccaaagtgctgggattacaggcgtgagccactgcacctggccCAATTTTATTTC------TTATTATTTTGCATGCCATTGTGaatgtatgaactgtttctctc--tatttagatctttaatttccctcagcaatcttttgcagtttttagtgtacacgtcttgcacttctttattaaaattttttctattcatt---ttatttttgaggctttgtaaataaaattactctcctaatttcattattgaattatttttgtcagtat-tagacatatgattgattttagtgaatatgtcttcatcgtgctaggaactttgttgttgttgctgctgttgttgttattgttgagacagagtttcgctcttgttgcccaggctggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102934502 456 - 106955855 tttttgtagagctagggtttcaccatattgcccaggctgttctcaaactcccaaactcaagcaatccgcccaccttggcttcccaaagtgctgggattacaggtgtgagccactgcacctggccCAATTTTATTTC------TTATTATTTTGCATGCCATTGTGAATGTatgaattgtttctctctttatttagatctttaatttctctcagcaatcttctgtagtttttagtgtacacgtcttgcatttctttattaaatttgtttctattcattttattatttttgaggctttgtaaataaaattgctctcctaattttactgttgaattatttttgtcagtatctagatatatgattgattttagtGAATATGTCTTCATCGTGCTAGGAATTttgttgttgttgctgctgttgttgatattgttgAGACAGAGTTTCGCTCTTGT-GCCCAGGCTGGA i nomLeu3.chr10 C 0 I 332 s rheMac3.chr19 60202105 450 + 64156825 tttttgcagagctggggttgtaccatgttgcccaggctgtcctcaaacttccaaactcaagcaatcctctcaccttggcttcccaaagtattgggattacaggcatgagccactgcacctggccCAATTTTATTTCTTatatttattgttttgcaagtcattgtgaatgtatgaactgtttctc----tatttagatctttaatttccctcagcaatcttttgtagttttcagtgtacacgtctcgcatttctttattaaatttgtttctattcattttattatttttgagg-tttgcaaata-----gctttcctaatttcactattgaattatttttgtcagtatatagac--atgattgattGTAGTGAATATGTCTTCATCGTGCTAGGAATTTTGTTGTTGTTGTTGC-ATTGTTGTCAttgttgagacagagtttcgctctttttgcccaggctgga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55300429 450 + 59248254 tttttgcagagctggggttgtaccatgttgcccaggctgtcctcaaacttccaaactcaagcaatcctctcaccttggcttcccaaagtattgggattacaggcatgagccactgcacctggccCAATTTTATTTCTTatatttattgttttgcaagtcattgtgaatgtatgaactgtttctc----tatttagatctttaatttccctcagcaatcttttgtagttgtcagtgtacacgtctcgcatttctttattaaatttgtttctattcattttattatttttgagg-tttgcaaata-----gctttcctaatttcactattgaattatttttgtcagtatatagac--atgattgattGTAGTGAATATGTCTTCATCGTGCTAGGAATTttgttgttgttgttgc-attgttgtCAttgttgagacagagtttcgctctttttgcccaggctgga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47398925 454 + 51301725 tttttgcagAGCTGGGGTtgtaccatgttgcccaggctgtcctcaaacttccaaactcaagcaatcctctcaccttggcttcccaaagtattgggattacaggcatgagccactgcacctggcccaattttatttcttatatttattgttttgcaaGTCATTGTGAATGTATGAACTGTTTCTctctttatttagatctttaatttcccTCAGCaatcttttgtagttttcagtgtacacgTCTcgcatttctttattaaatttgtttctattcattttattatttttgagg-tttGCAAATA-----GCTTTCCTAATTTCactattgaattatttttgtcAGTATATAGAC--ATGATTGATTGTAGTGAATATGTCTTCATCGTGCtaggaattttgttgttgttgttgc-attgttgtcattgttgagacagagtttcgctccttttgcccaggctgga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47094725 454 + 50890351 tttttgcagagctggggttgcaccatgttgcccaggctgtcctcaaacttccaaactcaagcaatcctcccaccttggcttcccaaagtgctgggattacaggcatgagccactgcacctggccCAATTCTATTTCTTATATTTATTATTTTGCATGCCATTGTGAATGTatgaactgtttctctctttatttagatctttaatttccctcagcaatcttttgtagttttcagtgtacgcgtctcgcatttctttattaaatttgtttctattcattttattatttttgagg-tttgcaaata-----gctttcctgatttcactattgaattattttcgtcagtatatagac--atgattgattGTAGTGAATATGTCTTCATCGTGCTAGGAATTttgttgttgttgttgc-attgttgtCAttgttgagacagagtttcactctttttgcccaggctgga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 45623232 13 + 49145316 I a score=229207.000000 s hg38.chr19_GL949747v2_alt 371492 126 + 729520 gtgcaatggcgcaatctcggctcactgcaacctccacctcccgagttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcatgcaccaccatgcctggctaagtttttgtat s panTro4.chr19 59313272 126 + 63644993 gtgcaatggcgcaatctcggctcactgcaacctccacctcccgagttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcatgcaccaccatgtctggctaagtttttgtat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56203935 126 + 60714840 atgcaatggcgcaatctcggctcactgcaacctccacctcccgagttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcacgcaccaccacgcctggctaattttttgtat i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60202555 126 + 64156825 gtgcaatggcacaatctcggttcactgcaacctctgtctcctgagttcaagcaattctcctgcctcaacctcccgagtagctgggattacaggcatgcaacaccacacctggctaattttttgtat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55300879 126 + 59248254 gtgcaatggcacaatctcggttcactgcaacctctgtctcctgagttcaagcaattctcctgcctcaacctcccgagtagctgggattacaggcatgcaacaccacacctggctaattttttgtat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47399379 126 + 51301725 gtgcaatggcacaatctcggttcactgcaacctctgtctcctgagttcaagcaattctcctgcctcaacctcccgagtagctgggattacaggcatgcaacaccacacctggctaattttttgtat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47095179 126 + 50890351 gtgcaatggcgcgatctcggttcactgcaacctctgtctcctgagttcaagtgattctcctgcctcaacctcccgagtagctgggattacaggcatgcaacaccacacctggctaattttttgtat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I e calJac3.chr22 45623232 13 + 49145316 I e nomLeu3.chr10 102934958 332 - 106955855 I a score=261482.000000 s hg38.chr19_GL949747v2_alt 371618 123 + 729520 ttttagtagagacggggtttcaccatgttggccaggctggtctcaaacccctgacctcaggtgatcc--actcccctcagtctcccaaaatgctgggattacaggcatgagccaccacatccggc s panTro4.chr19 59313398 123 + 63644993 ttttagtagagatggggtttcaccatgttggccaggctggtctcaaacccctgacctcaggtgatcc--actcccctcagtctcccaaaatgctgggattacaggcatgagccaccacatccggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56204061 123 + 60714840 tttaagtagagatggggtttcaccatgttgaccaggctggtctcaaacccctgacctcaggtgatcc--actcccctcagcctcccaaaatgctgggattacaggcgtgagccaccacatccagc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60202681 123 + 64156825 ctttagtagagatggggtttcaccatgttggccaggctggtctcaaacccctgacctcaaaccctga--ccccccttcagcctcccaaagtgctgggataacaggcatgagccaccacTTTCTGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55301005 123 + 59248254 ctttagtagagatggggtttcaccatgttggccaggctggtctcaaacccctgacctcaaaccctga--ccccccttcagcctcccaaagtgctgggataacaggcatgagccaccacTTTCTGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47399505 123 + 51301725 ctttagtagagatggggtttcaccatgttggccaggctggtctcaaacccctgacctcaaaccCTGa--ccccccttcagcctcccaaagtgctgggataacaggcatgagccaccacttcctGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47095305 125 + 50890351 ctttagtagagatggggtttcaccatgttggccaggctggtctcaaacccctgacctcaaaccctgaccccccccttcagcctcccaaagtgctgggataacaggcatgagccaccacttcctgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45623245 123 + 49145316 tttttgaagagctggggtttcaccatgttgtccaggctggtctcaaactcctgaactcaagcaatct--gcccaccttggcttcccaaagtgcagggattacaggcatgagccaccacgcctggc i calJac3.chr22 I 13 C 0 e canFam3.chr1 19785924 401 - 122678785 I e nomLeu3.chr10 102934958 332 - 106955855 I a score=165248.000000 s hg38.chr19_GL949747v2_alt 371741 59 + 729520 TCTTGCTAGAAATTTATTGTACTTTTCAGCTTCATAATTTCCATTTAGTTTTATGCTTT s panTro4.chr19 59313521 59 + 63644993 TCTTGCTAGAAATttattgtacttttcagcttcataatttccatttagttttatgcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56204184 59 + 60714840 ccttgctagaaatttattGTACTTTTCAGCTTCATAATTTCCATTTACTTTTATGCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3944223 57 + 106955855 tcctgcTAGGAATGTATTGCACTTTTCAAC--CAGAGCTTCCATTTAGTTTTATGTTTT i nomLeu3.chr10 I 2959 n 332 s rheMac3.chr19 60202804 59 + 64156825 CCTTGCTAGAAATttattgtacttttcagcttcataatttccatttagttatatgcttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55301128 59 + 59248254 CCTTGCTAGAAATTTATTGTACTTCTCAGCTTCATAATTTCCATTTAGTTATATGCTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47399628 59 + 51301725 CCTTGCTAGAAATTTATTGTACTTCTCAGCTGCATAATTTCCATTTAGTTATATGCTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47095430 59 + 50890351 cCTTGCTAGAAATGTATTGTACTTCTCAGCTTCATAATTTCCATTTAGTTTTATGCTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45623368 59 + 49145316 GCTTGCTAGAAATTGATTGTACTTTTCGGCTTCATAATTTCCATTTGGTTTTATGCTTT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I a score=1121254.000000 s hg38.chr19_GL949747v2_alt 371800 405 + 729520 AATAATATCCCAAGGTAACATTATGGTCACTTTCTGTAACTAATATTTCTTACTCTGTTGATTTATCAGGGGCTGGATTACTCTCCTTCAAGTTTCCTGTGCTAGCCTAATGGTTTGGATGTTGTTGTTCAATGCAATTCTCCTTTATTTTTGTTCCATttatttttagcagctttgtttagctataattgttctactaaaaaacc-ttctcacttaatgtacacaatcagatgaatttggacacatgcaATAACCCCTTGGAAGACATTCACGTGCATGC-GTTGTTGG-TTTTTCCGCTTCTTACGGGAACTCCTTTcaggcatttccatctccacgctacacatggggaaatagaggctcacagaggagaaaggacgtggttcaggtcacacCTGTCCCTGGTCC s panTro4.chr19 59313580 405 + 63644993 aataatttcCCAAGGTAACATTATGGTCACTTTCTGTAACTAATATTTCTTACTCTGTTGATTTATCAGGGGCTGGATTACTCTCCTTCAAGTTTCCTGTGCTAGCCTAATGGCTTGGATGTTGTTGTTCAATGCAATTCTCCTTTATTTTTGTTCCATttatttttagcagctttgtttagctataattgttctactaaaaaacc-ttctcacttaatgtacacaagcagatgaatttggacacatgcaATAACCCCTTGGAAGACATTCACGTGCATGC-GTTGTTGG-TTTTTCCGCttcttacaggaactcctttcaggcatttctatctccacgctacacatggggaaatagaggctcacagaggagaaaggacgtggttcaggtcacacCTGTCCCTGGTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56204243 392 + 60714840 AATAATTTCCCAAGGTAACATTATGGTCACTTCCTGTAACTAATATTTCTTACTCTTTTGATTTATTAGGGTCTGGATTACTCTCCTTCAAGTTTCTTGTGCTAGCCTAATGGCTTGGATGTTGTTGTTCAATGCAATTTTACTTTATTTTTGTTCCATttatttttagcagctttgtttagctataattgttgtgct-aaaaacc-ctctcacttaatgaacacaactagatgaatttggacacaggcaATAACACCTTAGAAGACATTCACGTGCATGC-ATTGTTGG-TTTTTCCGCTTctcacaggaa------------atttccatctccacgctacacatggggaaatagaggctcacagaggagaaaggacgtggttcaggtcacacCTGTCCCTGGTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102935290 391 - 106955855 aaTAATTTCCCAAGGTAACATTATGGTCACTTCCTGTAACTAATATTTCTTACTCTGTTGATTTATTA--CTCTGGATTACTCGCCTTCAAGTTTCTTGTGC------------TTGGATGTTGTTGTTCAGCACAATTTTACTTTATTTTTATTGCATttatttttagcagctctgtttagctataattgttgtact-aaaaacc-ctctcacttaatgtacacaattagatgaatttggacacatgcaATAACCCCTTAGAAGACATTCATGTGCATGCAGTTGTTGG-TTTTTCCACTTCTCACAGGATCTCATTTcagccatttccatctccacgctacacatggggaaacagaggctcacagaggagaaaggacgtggtccaggtcacacCTGTCCCTGGTCC i nomLeu3.chr10 I 332 C 0 s rheMac3.chr19 60202863 404 + 64156825 aataatttcCCAAGGTAGCATTATGGTCACTTCCTGTAACTAATATTTCTTACTCTGTTGATTCATTAGGGTCTGGATTACTCTCCTTCAAATTTCTTGTGCTATCCTAATGGCTTGGATGTTGTGGTTCAATGCAATTTTACTTTATTTTTATTGCATttatttttagcagctttatttagctataattgttttact-aaaaacc-ctctcacttaacatacacaattagatgaatttggacacatgcaATAACCCCTCAGAAGACATTCACGTGCATGC-GTAGCTGG-TTTTCCGGCttctcacaggaactcatttcaggcatttccatctccacgctacacatggggaaatagaggctcacagaggagaaaggacgtggtccaggtcacacCTGTCCCTGGCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55301187 404 + 59248254 AATAATTTCCCAAGGTAGCATTATGGTCACTTCCTGTAACTAATATTTCTTACTCTGTTGATTCATTAGGGTCTGGATTACTCTCCTTCAAATTTCTTGTGCTATCCTAATGGCTTGGATGTTGTGGTTCAATGCAATTTTACTTTATTTTTATTGCATttatttttagcagctttatttagctataattgttttact-aaaaacc-ctctcacttaacatacacaattagatgaatttggacacatgcaATAACCCCTCAGAAGACATTCACGTGCATGC-GTAGCTGG-TTTTCCGGCTTCTCACAGGAACTCATTTcaggcatttccatctccacgctacacatggggaaatagaggctcacagaggagaaaggacgtggtccaggtcacacCTGTCCCTGGCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47399687 404 + 51301725 AGTAATTTCCCAAGGTAGCATTATGGTCACTTCCTGTAACTAATATTTCTTACTCTGTTGATTCATTAGGGTCTGGATTACTCTCCTTCAAATTTCTTGTGCTATCCTAATGGCTTGGATGTTGTGGTTCAAtgcaattttactttatttttattgcatatatttttagcagctttatttagctataattgttttaCT-AAAAACC-CTCTCACTTAACATACACAATCAGATGAATTTGGACACATGCAATAACCCCTCAGAAGACATTCACGTGCATGC-GTAGCTGG-TTTTCCGGCTTCTCACAGGAACTCATTTCAGGCATTTCCATCTCCACGCTACACATGGGGAAATAGAGGCTCACAGAGGAGAAAGGGTGTGGTCCAGGTCACACCTGTCTCTGGTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47095489 404 + 50890351 AATAATTTCCCAAGGTAGCATTATGGTCACTTCCTGTAACTAATATTTCTTACTCTGTTGGTTCATTAGGGTCTGGATTACTCTCCTTCAAATTTCTTGTGCTATCCTAACGGCTTGGATGTTGTGGTTCAATGCAATTTTACTTTATTTTTGTTGCATttatttttagcagctttatttagctataattgttatact-aaaaaacgctgtcacttaacgtacacaattagatgaatttggacacatgcaATAACCCCTTAGAAGACATTCACGTGCATGC-ATAGTTGG--TTTCTGGCTTCTCACAGGAACTCATTTcaggcatttccatctccacgctacacatggggaaatagaggctcacagaggagaaaggacgtggtccaggtcacacCTGTCCCTGGCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45623427 397 + 49145316 AATAATTTCCTAAGGTAGCTTTAAGGTCACTTCCTGTAACTAAGATTTCTGCCTCTGCTGATT------AGTCGGGATTGCTCTCCTTCAAGTTTTGCGTGCTAGCCTAATGGCTTGGATGTTGTTGCTCAGCGCCATTTTATTTTA-TTTTACTGCATttatttttagcagctttatttaggtataattgctgtactaaaacacc-gtctccctcaatggacacagctagatgaatttggacatatgcaatcacccCGTAGAGGACATTCTCGtgcatgc-gttgttggtttttttcacttctcacaggaacgtatttcaggcttttccatctccgtgctacacatggggaaatagaggctcgcagagAAGGAAGGTTGGGGTCCAGGT--CACCTGTTCCTGGTCC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19785924 401 - 122678785 I a score=1094238.000000 s hg38.chr19_GL949747v2_alt 372205 355 + 729520 TCCAGGCTGAGGAGCAG----------AGAGACCACCCACCTT-AGTGCTGGAAGGGTTTAACACATAGCTTGGGCTCCCTCTTGTGGCCACAGTGGAGAAACTCCCTGCTTAGTTCATTTTTA------TTTTTTCCATCTG-GCATTCATttt---tttcattcag-taagtatttgttggtcctgtcctgtg-tgccagacactgtttgaggctctagaggtccaccaatatagaaaacaaacaccctttccatggaagagcttatattcttgcagaaggagaggggcagtaacccacaggcatta-tacagtcacagtcagctagaaggtga--gagtgatttggataaatgagaaagtgcag-------cggtggtccagggg s panTro4.chr19 59313985 356 + 63644993 TCCAGGCTGAGGAGCAG----------AGAGACCACCCACCTT-AGTGCTGGAAGGGTTTAACACATAGCTTGGGCTCCCTCTTGTGGCCACAGTGGAGAAACTCCCTGCTTAGTTCCTTTTTA------TTTTTTCCATCTG-GCATTCATttt---tttcattcagttaagtatttgttggtcctgtcgtgta-tgccagacactgtttgaggctctagaggtccaccaatatagaagacaaacaccctttccatggaagagcttatattcttgcagaaggagaggggtagtaacccacaggcatta-tacagtcacagtcagctagaaggtga--gagtgatttggataaatgagaaagtgcag-------cggtggtccagggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56204635 352 + 60714840 TCCAGGCTGAGGAGCAG----------AGAGACCACCCACCTT-AGTGCTGCAAGAGTTTAACACATAGCTTGGGCTCCCTCTTGTGGCCACAGTGGAGAAACTCCCTACTTAGTTCATTTTTA------TTTTTTCCATCTG-GCATTCatttt---ttt-attcag-taagtatttgttggtcctgtcctgtg-tgccagacac----tgacgctctaaaggtccatcaatatacaaaacaaacaccctttccatggaagagcttatattcttgcagaaggagaggggcagtaactcacaggcatta-tacagtcacagtcagctagaaggtgaacgagtgatttggataaatgagaaagtgcag-------cggtggtccagggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102935681 352 - 106955855 TCCAGGCTGAGGAGCAG----------AGAGACCACCCACCTTGGGGGCTTCAAGGGTTTAACACATAGCTTGGGCTCCCTCTTGTGGCCACAGTGGAGAAACTCCCTGCTTAGTTCATTTTTA------TTTTTTCCATCTG-GCattcatttt---tttcattcag-----tatttgttggtcctgtcctgtg-tgccagacactgtttgatgctctagaggtccatcaatatacaaaacaaacaccctttccatggaagggcttatattcttgcagaaggagtggggcagtaacccacaggcatta-tacagtcacagtgagctagaaggtga--gagtgatttggataaatgagaaagtgcag-------cggtggtccagggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60203267 354 + 64156825 TCCAGGCGGAGGAGCAG----------AGAGACCACCCACCTT-GGAGCTGGGAGGGTTTAGCACATAGCTTGAGCTCCCTCTTGTGGCCACAGTGGAGAAACTCCCTGCTTAGCTCATTTTTA------TTTTTTCCATCTG-GCGTTCATTTT---TCtcattcag-tcagtatttcttggtcctgtcctgtg-tgcca-acactgtttgaggctctagaggttcgtcaatatacaacacaaacaccctttccatggaagagcttatattcttgcagaaggagacgggcagtaaCCCACGGGCATTA-CACAGTCACAGTCAGCTAGAAGATGa--gagtgatttggataaaggagaaagtgcag-------cggtggtccaagag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55301591 354 + 59248254 TCCAGGCGGAGGAGCAG----------AGAGACCACCCACCTT-GGAGCTGGGAGGGTTTAGCACATAGCTTGAGCTCCCTCTTGTGGCCACAGTGGAGAAACTCCCTGCTTAGCTCATTTTTA------TTTTTTCCATCTG-GCGTTCATTTT---TCtcattcag-tcagtatttcttggtcctgtcctgtg-tgcca-acactgtttgaggctctagaggttcgtcaatatacaacacaaacaccctttccatggaagagcttatattcttgcagaaggagacaggcagtaaCCCACGGGCATTA-CACAGTCACAGTCAGCTAGAAGATGa--gagtgatttggataaaggagaaagtgcag-------cggtggtccaagag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47400091 354 + 51301725 TCCAGGCTGAGGCGCAG----------AGAGACCACCCACCTC-GGGGCTGCGAGGGTTTAGCACATAGCTTGAGCTCCCTCTTGTGGCCACAGTGGAGAAACTCCCTGcttaactcattttta------ttttttctatctg-gCGTTCATTTT---TCTCAGTCAG-TCAGTATTTCTTGGTCCTGTCCTGTG-TGCCA-ACACTGTTTGAGGCTCTAGAGGTCCGtcaatatacaaaacaaacacCCTTTCCATGGAAGAGCTTATATTCTTGCAGAAGGAGACGGGCAGTAACCCACGGGCATTA-CACAGTCACAGTCAGCTAGAAGATGA--GAGTGATTTGGATAAAGGAGAAAGTGCAG-------CGGTGGTCCAAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47095893 352 + 50890351 TCCAGGCGGAGGCGCAG----------AGAGACCACCCACCTT-GGAGCTGGGGGAGTTTAGCACATAGCTTGAGCTCCCTCTTGTGGCCACAGTGGAGAAACTCCCTGCTTAACTCATTTTTA------TTTTTTCCATCTG-GCGTTCATTTT---TCtcattcag-tcagtatttcttggtcctgtcctgtg-tgcca-acactgtttgaggctctagaggtccgtcaatatacaaaacaaacaccctttccatggaagagcttatattcttgcagaaggagacgggcagtaacccacgggcatt---acagtcacagttggctagaagatga--gagtgatttggataaaggagaaagtgcag-------cggtggtccaaggg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45623824 342 + 49145316 CCCAGGCTGAGGAGC------------AGAGACCACCCACCTT-GGGGCTGCAAGAGTTTAACGCATATCTTGGGCGCCGTCTTGTGGCCACAGTGGAGAAACTCCCTGCTTAGTTCATGTTTA-----TTTTTTTCCATCTG-GCattcatttt---tcttattcag-taagtatttgtcggtcctctcctgtgatgccagacactgtttgaggctccagaggtccatcaatatacaaaacaaacaccctttccatcgaatagcttatattcttgcagaagcagacaggcagtaaccagtgagcatca-tacattcacag------------tga--gagCTATTTGGATAAATGAGAAGGTTCCG-------CGGTGGTCT-GGGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19786325 382 - 122678785 TCCAAGAACAGGAGCAGGTTCATCATCAAAGACCACCCACCT--GGGGCCGTAAGGAATTAGCATGTATCTTGTTCTCCCTCTTGTGGGCAAAGTGGAGAAATGCTTTTAGAAGTCAAAGGGAAAACAATTTTTTTTCATCTGAGAAATTATTTTttctttcattcag-taagtatttgctgatcctctactgta-tgccagatactattcaatactcttgagattcatcagatgaacagacaaggatccctgcccttgagaagcttatatttctgcagagggaaacaggccatacaccatggacagcagtaaattcgaggtctaccagaagaagaa-gagtgatttgga-aaataggaaagtggaagacacctgggtggctcagtgg i canFam3.chr1 I 401 I 518 a score=820031.000000 s hg38.chr19_GL949747v2_alt 372560 288 + 729520 gtctggagggtgcaaagctcagcagggggaatagtgtggcagttgcagacagaggggtaggaagagggaagtgg-caggaagagaatgcagaggggtgagggttggggccacaggtcctgtgt--agagccctgttggtcaccatgatcaccctgagtgagctgggaagtaacACAAATGACTCCAAATAGAA-GCGCCTTCATGGAGCCTTCTTCTTCCC--AGA------------------CTTCAACTAGAAACCTGAGCTGCCTGTCACAGCAGGGGACGTGTCATCCCATTAGACTTCAAACGTCC s panTro4.chr19 59314341 288 + 63644993 gtctggagggtgcaaagctcagcagggggaatagtgtggcagttgcagacagaggggtaggaagagggaagtgg-caggaagagaatgcagaggggtgagggttggggccacaggtcctgtgt--agagccctgttggtcaccatgattaccctgagtgagctgggaagtaacACAAATGACTCCAGATAGAA-GCGCCTTCATGGAGCCTTGTTCTTTCC--AGA------------------CTTCCACTAGAAACCTGAGCTGCCTGTCACAGCAGGGGACGTGTCATCCCATTAGACTTCAAACGTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56204987 288 + 60714840 gtctggagggtgcaaagctcaatagggggaatagcgtggcagttgcagacagaggggtaggaagagggaagtgg-caggaagagaatgcagaggggtgagggttggggccacaggtcctgtgt--agagccctgttggtcaccatgattaccctgagtgagctgggaagtaacACAAATGACTCCAAATAGAA-GCGCCTTCATGGAGCATTCTTCTTCCC--AGA------------------CTTCCACTAGAAATCTGAGCTGCCTCTCACAGCAGGGGACGTGTCATCCCATTAGACTTCAAACGTCC i ponAbe2.chr19 C 0 I 207 s nomLeu3.chr10 102936033 306 - 106955855 gtctggagggtgcaaaactcagcagcgggaacagtgtggcagtttcagacagaggggtaggaagagggaagtgg-caggaagagaatgccgaggggtgagggttggggccacaggtcctgtgt--agagccctgttggtcaccatgattaccctgagtgagctgggaagtaacACAAATGACTCCAAATAGAA-GCGCCTTCATGGAGCATTCTTCTTCCC--AGATGCTTCCCAGGAGCATTTCTTCCACTAGAAATCTGAGCTGCCTCTCACAGCAGGCGACGTGTCATCCCAGTAGACTTCAAACGTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60203621 290 + 64156825 gtctgg-gggtgcaaagctcagcagggggaacagtgtggcagttgcagacagagggatgggaagagggaagtgg-caggaagagaatgcagaggggtgagtgttggggccacaggtcctgtgtagagagccctgttggtcaccatgattatgctgagtgaactgggaagtaacagaaATGACCCCAAACAGAATGTGCCTTCATGGAGCATTCTTCTTCCC--AAA------------------CTTCCACTAGCACGCTGAGCTGCCTCTCACAGCAGGGGACGTGTCTTCCCATTAGACTTCAAACATCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55301945 290 + 59248254 gtctgg-gggtgcaaagctcagcagggggaacagtgtggcagttgcagacagagggatgggaagagggaagtgg-caggaagagaatgcagaggggtgagtgttggggccacaggtcctgtgtagagagccctgttggtcaccatgattatgctgagtgaactgggaagtaacagaaATGACCCCAAACAGAATGTGCCTTCATGGAGCATTCTTCTTCCC--AAA------------------CTTCCACTAGCACGCTGAGCTGCCTCTCACAGCAGGGGACGTGTCTTCCCATTAGACTTCAAACATCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47400445 290 + 51301725 GTCTGG-GGGTGCAAAGCTCAGCAGGGGGAACAGTGTGGCAGTTGCAGACAGAAGGATGGGAAGAGGGAAGTGG-CAGGAAGAGAATGCAGAGGGGTGAGGGTTGGGGCCACAGGTCCTGTGTACAGAGCCCTGTTGGTCACCATGATTATCCTGAGTGAACTGGGAAGTAACAGAAATGACTCCAGATAGAATGCGCCTTCATGGAGCATTCTTCTTCCC--AAA------------------CTTCCACTAGCACGCTGAGCTGCCTCTCACAGCAGGGGACGTGTCATCCCATTAGACTTCAAACGTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47096245 280 + 50890351 gtctgg-gggtgcaaagctcagcagggggaacagtgtggctgttgcagacagagggatgggaagagggaagtgg-caggaagagaatgcagaggggtgacggttggggccacaggtcctgtgtagagacccctgttggtcaccatgattatcctgagtaaactgggaagtaacAGATATGACTCCAAATAGAATGCGCCTTCATGGAGCATTCTTCTTCCCAAAAA------------------CTTCCACTA------------GCCTCTCACAGCAGGGGACGTGTCATCCCATTAGACTTCAAACGTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45624166 289 + 49145316 GTCTGGAGGGTACAAAGGTCAGCAGGAGGAGCAGCGTGGTGGTTGCAGACAGAGGAGCGGGGAGAGGGAAGTGTCCAGAAAGAGAATGCAGAGGGGTGAGGGTTGGTGCTACAGATCCCATTT--AGAGCTCCGTTGGTCACCATGATTACCCTGAGTGGGCTTGGAAGTAACACAAATGACCCTAAATAGAATGTGTCTTCAT-GAGCATTCTTCTTCCC--AAA------------------CTTCCACTAGAAAGCTGAGCTACCTCTCACAGCAGGGGACGTGTCATCCCACTAGACTTCAAACATCC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19786707 518 - 122678785 I a score=175793.000000 s hg38.chr19_GL949747v2_alt 372848 57 + 729520 TCAGCAATTCCCTGCCCCCTTCTTTCTAGGAGTCAGGATTCCTCAGCC-TTGCTCTAG s panTro4.chr19 59314629 57 + 63644993 TCAGCAATTCCCTGCCCCCTTCTTTCTAGGAGTCAGGATTCCTCAGCC-TTGCCCTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56205482 58 + 60714840 TCAGCAATTCCCTGCCTCCTTCTTTCTAGGAGTCAGGATTCCTCAGCCTTTGCTCTAG i ponAbe2.chr19 I 207 C 0 s nomLeu3.chr10 102936339 57 - 106955855 TCAGCAATTCCTTGCCCCCTTCTTTCTAGGAGTCGGGATTCCTCAGCC-TTGCTCTAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60203911 57 + 64156825 TCAGCAATTCCCTGCCCCCTTCTTTCTAGGAGTCAAGATTCCTCAGCC-TTGCTCAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55302235 57 + 59248254 TCAGCAATTCCCTGCCCCCTTCTTTCTAGGAGTCAGGATTCCTCAGCC-TTGCTCAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47400735 57 + 51301725 TCAGCAATTCCCTGCCCCCTTCTTTCTAGGAGTCAGGATTCCTCAGCC-TTGCTCAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47096525 57 + 50890351 TCAGCAATTCCCTGCCCCCTTCTTTCTAGGAGTCAGGATTCCTCAGCC-TTGCTCAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45624455 57 + 49145316 TCAGCAATTCCCCGTCTCCTTTTTTCCAAGAGTCAGGGTTCCTCAGCC-CTGCTCTAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19786707 518 - 122678785 I a score=2487466.000000 s hg38.chr19_GL949747v2_alt 372905 727 + 729520 AACTGCATCTGGTGACC---------CCTAGAAACCTGTCCTGGAAGCCTTACAAGGCTCttcacactcac----------------------------agtttgtgat---atgaccccagagttgtgcagtgcacaacctacacagctggacacgatgggcctgGCACTCT----------TCCTCTGTGCTCCCACTGCACTCTGTGCTGACTATGTCA-TTCCACTGGGTGGTGCCATGTCAACTTCTCTCCTCTCCTCTCAATATCCTGTAAG---------GATAAGATAGGATCAAAGTTCTACCCACGTCCCTGGTACTCAGAAGAGGAGCTGAAACATTGGCGACCACTCATTAGCACTCTACTTA----ACAAAACAAATTGCCCAGGTAGTTATGATTAGATTTCTATAAAAGGCTGAATAATTACAGAAAGGCTCTAGAAACTAGTGTATAATTATGTACAGGCGCTGGCAGTGTGTAGAGTCATGGAAATCAGCTAAGGAATCGCGGTGCAGTCTCAGGAACCAGCTGGATAATTGCACCAGGAGCTCCCAAAACCAGCTGGATAATTATAGTGGAGTCCCTGGAACTCAGCGGGTAATTACCATGTACTCATGGAATCAGCAGTAATAATAGAAGGGTCCCAAATGCAgacactagggaaagtctggagacacttttgattgtcacaacccagaggagagggggatgcttctgg-gtggtggggggtggaggcgggggatgc--------------------acaggacagctcctcccccaaggaataacctagccc s panTro4.chr19 59314686 730 + 63644993 ACCTGCATCTGGTGACC---------CCTAGAAACCTGTCCTGGAAGCCTCACAAGGCTCttcacactcac----------------------------agtttgtgatatgatgaccccagagttgtgcagtgcacaacctacacagctggacatgatgggcctgGCACTCT----------TCCTCTGTGCTCCCACTGCACTCTTTGCTGACTATGTCA-TTCCACTGGGTGGTGCCATGTCAACTTCTCTCCTCTCCTCTCAATATCCTGTAAG---------GATAAGATAGGATCAAAGTTCTACCCACGTCCCTGGTACTCAGAAGAGGTGCTGAAACATTGGCGACCACTCATTAGCACTCTACTTA----ACAAAACAAATTGCCCAGGTAGTTATGATTAGATTTCTATAAAAGGCTGAATAATTACAGAAAGGCTCTAGAAACTAGTGTATAATTATGTACAGGCACTGGCAGTGTGTAGAGTCATGGAAATCAGCTAAGGAATCGCGGTGCAGTCTCAGGAACCAGCTGGATAATTGCACCAGGAGCTCCCAAAACCAGCTGGATAATTATAGTGGAGTCCCTGGAACTCAACGGGTAATTACCATGTACTCATGGAATCAGCAGTAATAATAGAAGGGTCCCAAATGCAgacactagggaaagtctggagacacttttgattgtcacaacccagaggagagggggatgcttctgg-gtggtggtgggtggaggcgggggatgc--------------------acaggacagctcctcccccaaggaataacctagccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56205540 729 + 60714840 ACATGCATCTGGTGACC---------CCTAGAAACCCATCCTGGAAGTCTCACAAGGCTCttcacactcac----------------------------agtttgtgatatgatgaccccagagttgtgcagtgcacaacctacacagctggacatgatgggcctgGCGCTCT----------TCCTCTGTGCTCCCACTGCGCTCTGTGCTGACTATGTCA-TTCCACTGGGTGGTGCCATGTCGACTTCTCTCCTCTCCTCTCAATATCCTGTAAG---------GATAAGATAGGATCAAAGTTCTATCCACATCCCTGGTACTCAGAAGAGGAGCTGAAACATTGGCGACCACTCATTAGCACTCTACTTA----ACAAAACAAATTGCCCAGGTAGTTATGATTAGATTTCTATAAAAGGCTGAATAATTACAGAAAGGCTCTAGAAACTAGTGTATAATTATGTAGAGGCGCTGGCAGTATGTAGAGTCATGGAAATCAGCTAAGGAATCGTGGTGCAGTCTCAGGAACCAGCTGGATAATTGCACCAGGAGCTCCCAGAACCAGCTGGATAATTATAGTGGAGTTCCTGGAACTCAACGGTTAATTACCATGTACTCATGGCATCAGCAGTAATAATAGAAGGGTCCCAAATGCAgacactagggaaagtctggagacac-tttgattgtcacaagccagaggagagggggatgcttctgg-gtgacagtgggtggaggcgggggatgc--------------------acaggacagctcctcccccaaggaataacctagccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102936396 730 - 106955855 ACCAGCATCTGGTGACC---------CCTAGAAACCTGTCCTGGAAGCCTCACAAGGCTCttcacactcat----------------------------agtttgtgatatgatgaccccagagttgtgcagtgcacaacctacacagctggacatgatgggcctgGCGCTCT----------TCCTCTGTGCTCCCACTGCACTCTGTGCTGACTGTGTCA-TTCCACTGGGTTGTGCCATGTCAACTTCTCTCCTCTCCTCTCAATATCCTGTAAG---------GATAAGATAGGATCAAAGTTCTACCCACGTCCCTGGTACTCAGAAGAGGAGCTGAAACATTGGCGACCACTCATTAGCACTCTACTTA----ACAAAACAAATTGCCCAGGTAGTTATGATTAGATTTCTATAAAAGGCTGAATAATTACAGAAAGGCTCTAGAAACTAGTGTATAATTATGTAGAGGCGCTGGCAGTATGTAGAGTCATGGAAATCAGCTAAGGAATCGCGGTGCAGTCTCAGGAACCAGCTGGATAATTGCACCAGGAGCTCCCAGAACCAGCTGGATAATTATAGTGGAGTCCCTGGAACTCAATGGGTAATTACCATGTACTCATGGAATCAGCAGTAATAATAGAAGGGTCCCAAATgaagacactagggaaagtctggagacacttttgattgtcacaacccggaggagagggggatgcttctgg-gtggtggtgggtggaggtgggggatgc--------------------acagaacagctcctcgcccaaggaataacctagccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60203968 739 + 64156825 ACCTGCATCTGGTGACC---------CCTAGAAACCCGTCCTGGAAGTCTCACAAGGCTCttcacactcac----------------------------agtttgtgatatgatgaccccagagttgtgcagtgcactacctacccagctggacatgatggtcctgGTGCTCT----------TCCTCTGTGCTCCCACTGCACTCTGTGCTGACTATGTCA-TTCCACTTGGTGGTGCCATGTCAACTTCTCTCCTCTCCTCTTAATATCCTGTAAGCTCTTTAA-GATAGGATAGGATCAAAGTTCTACCCACGTCCCTGGTACTCAGAAGAGGGGCTGAAACATCGGCCACCACTCATTAGCGCTCTACTTA----ACAAAACAAATTGCCCAGGTAGTTATGATTAGATTTCTATAAAAGGCTGAATAATTACAGAAAAGCTCTAGAAACTAGTGTATAATTATGTAGAGGCGCTGGCAGTGTGTAGAGACACGGAAATCAGCTAAGGAATCGTGGTGCAGTCTCAGGAACCAGCTGGGTAATTGCACCAGGAGCTCCCAGAACCAGCTGGATAATTACAGTGGAGTCCCTGGAACTCAATGGGTGATTACCATGTACTCATGGAATCAGCGGTAATAATAGAAAGGTCCCAAATGCAgacactggggaaagtctggagacacttttgattgtcacaaccccgaggagagggcgatgctgctggcactgaggtgggtggaggctgaggatgc--------------------acagaacagctcctcccccagggaataacctagccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55302292 739 + 59248254 ACCTGCATCTGGTGACC---------CCTAGAAACCCGTCCTGGAAGTCTCACAAGGCTCttcacactcac----------------------------agtttgtgatatgatgaccccagagttgtgcagtgcactacctacacagctggacatgatggtcctgGTGCTCT----------TCCTCTGTGCTCCCACTGCACTCTGTGCTGACTATGTCA-TTCCACTGGGTGGTGCCATGTCAACTTCTCTCCTCTCCTCTCAATATCCTGTAAGCTCTTTAA-GATAGGATAGGATCAAAGTTCTACCCACGTCCCTGGTACTCAGAAGAGGGGCTGAAACATCGGCCACCACTCATTAGCGCTCTACTTA----ACAAAACAAATTGCCCAGGTAGTTATGATTAGATTTCTATAAAAGGCTGAATAATTACAGAAAAGCTCTAGAAACTAGTGTATAATTATGTAGAGGCGCTGGCAGTGTGTAGAGACACGGAAATCAGCTAAGGAATCGTGGTGCAGTCTCAGGAACCAGCTGGGTAATTGCACCAGGAGCTCCCAGAACCAGCTGGATAATTACAGTGGAGTCCCTGGAACTCAATGGGTGATTACCATGTACTCATGGAATCAGCGGTAATAATAGAAAGGTCCCAAATGCAgacactggggaaagtctggagacacttttgattgtcacaaccccgaggagagggcgatgctgctggcactgaggtgggtggaggctgaggatgc--------------------acagaacagctcctcccccagggaataacctagccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47400792 740 + 51301725 ACCTGCGTCTGGTGACC---------CCTAGAAACCTGTCCTGGAAGTCTCACAAGGCTCTTCACACTCAC----------------------------AGTTTGTGATATGATGACCCTagagttgtgcagtgcacaacctaCACAGCTGGACATGATGGTCCTGGTGCTCT----------TCCTCTGTGCTCCCACTGCGCTCTGTGCTGACTATGTCA-CTCCACTGGGTGGTGCCATGTcaacttctctcctctcctctcaatATCCTGTAAGCTCTTTAAGGATAAGATAGAATCAAAGTTCTACCCACATCCCTGGTAGTCAGAAGAGGGGCTGAAACATCGGCCACCACTCATTAGCGCTCTACTTA----ACAAAACAAATTGCCCAGGTAGTTATGATTAGATTTCTATAACAGGCTGAATAATTACAGAAAGGCTCTAGAAACTAGTGTATAATTATGTAGAGGCGCTGGCAGTGTGTAAAGACATGGAAATCAGCTAAGGAATCGTGGTGCAGTCTCAGGAACCAGCTGGGTAATTGCACCAGGAGCTCCCAGAACCAGCTGGATAATTACAGTGGAGTCCCTGGAACTCAATGGGTGATTACCATGTACTCATGGAATCAGCGGTAATAATAGAAAGGTCCCAAATGCAGACACTGGGGAAAGTCTGGAAACACTTTTGATTGTCACAACCCCTAGGAGAGGGTGATGCTGCTGGCACTGAGGTGGGTGGAGGCTGAGGATGC--------------------ACAGAACAGCTCCTCCCCCAGGGAATAACCTAGCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47096582 740 + 50890351 ACCTGCATCTGGTGACC---------CCTAGAAACCTGTCCTGGAAGTCTCACAAGACTCttcacactcac----------------------------agtttgtgatatgatgaccccagagttgtgcagtgcacaacctacacagctggacatgatggtcctgGTGCTCT----------TCCTCTGTGCTCCCACTGCGCTCTGTGCTGACTATGTCA-TTCCACTGGGTGGTGCCATGTCAACTTCTCTCCTCTCCTCTCAATATCCTGTAAGCTCTTTAAGGACAAGATAGGATCAAAGTTCTACCCACGTCCCTGGTAGTCAGAAGAGGGGCTGAAACATCGGCCACCACTCATTAGCGCTCTACTTA----ACAAAACAAATTGCCCAGGTAGTTATGATTAGATTTCTATAAAAGGCTGAATAATTACAGAAAGGTTCTAGAAACCAGTGTATAATTATGTAGAGGCGCTGGCAGTATGTAGAGACACGGAAATCAGCTAAGGAATCGTGGTGCAGTCTCAGGAACCAGCTGGGTAATTGCACCAGGAGCTCCCAGAACCAGCTGGATAATTACAGTGGAGTCCCTGGAACTCAATGGGTGATTACCATGTACTCATGGAATCAGCGGTAATAATAGAAAGGTCCCAAATGCAgacactggggaaagtctggaaacacttttgattgtcacaaccccgaggagagggcgatgctgctggcactgaggtgggtggaggctgaggatgc--------------------acaggacagctcctcccccagggaataaactagccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45624512 732 + 49145316 ACCTGCGTCTGCTGACC---------CCTAGAAACCTGTCCTGGAAGTCTCACAAGgctcttcacactcat----------------------------ggttggtggaatggtgacctcagagctgtgcagtgcacaacctacccagctgggcatgatggccctgATGCTCT----------TCCTCTGTGCTCCCACTGCGCTCTTTGCTGACCATGTCATTTCTACTGGGTGGTGCAATGCCAGCTTCTCTCCTCTGTC----ATATCCTGTAAGCTGTTTAGGGATAAGATAGAATCAAAGTTCTACCCAGGTCCCTGGTACTCAGAAGAGGGGCTGAAACATTGTCGACCACTCAGTAGCACTCTACTT---------AACAAATTGCCCAGGTAGTTATGGTTAGATTTCTATAAAAGGCTGAATAATTACAGAAAGCCTCTAGAAACTGGTGTATAATTATGTAGGGGCGCTGGCAGTGTGTAGAGTCACCGAAATCAGCTAAGGAATCATGGTGCAGTCTCAGGAACCAGCTGGATAATTGCACCAGGAGCTCCCGGAACCAGCTGGATAATTATAGTGGAGTCCCTGGAACTCAATGGGTAATTACCGTGTAGTCATGGAATCAGCAGTCATAATAGAAACGTCCCAAATGCAgacacaagggaaagtctggagacacttttgattgtcacaactcagaggagagggggatgctacggccactgaggtggggggaggctggggatgc--------------------agaggatagctcctcccccgaggaataacctagccc i calJac3.chr22 C 0 C 0 s canFam3.chr1 19787225 796 - 122678785 AATTGCATGAGGAGCTCCAGAGCAGGCCTGGATGCCTGTCTGGGAAGTCTCAGAAGTGGTCTTGCATTCAAAGTTTCCAAGGGACTGTATTGAAAATGGAGTTTGTGggatggtgacc-tggagttgtgcagggcacaaactacccagctgtccagga-agccctgCTGTCTTCTCTCTACAGtcctctgtggtcccaccaggttctgtgctggctctgtca-tgtctctgggtgatacagtgc---cttaatttctctccttccaacagcctataagctctttgaggacaagatagaatcagaattccatctatgttcctgctacccagaaaagggactgAAATCCCAGAGAC--CTCAGCAGGACTCTACATAATACATAAAGTAAGAAAACTGGGCAATTATGATTGGATTTCTATAGAAGGCCAGAT-ATTATGGCAGTGTTCTAGGAATTGGC-CATAATTATGCAAAATCACTGA-AGGATGTAAAGTCACTGGAATGAGCTAGGAAATCATGGTGTAGTCTCAGGAACCAGCTGGATAATTGCAAGAGGAGCT-CCAGAGCCAGCTGGGTAATTACAGTGGAGTTCCCAGAATCTGCTGGGTGACTAGCATGGAGTCATAGAATCAACAGTAATAATAGAAGAGTCCCAAATACAggcatcagggaatgtctggagacagttttgattgccacaacctgagagagag---gaatctcctgg-tatctagcaggtggaagccaggggtgctgcgaggcatcctgagatgtgcagggcggcccccacagcaaagaatcacccagtcc i canFam3.chr1 I 518 I 11529 a score=423987.000000 s hg38.chr19_GL949747v2_alt 373632 148 + 729520 cgaaagtcaacagtgttacccag-aaaaaaacagggttcctttgcctggtgaggagcaaacaactctcccgagaatgcaggtgatgtggtttggctctgtgtccccacccaaatctcacctggtattgtaatgatccccacgtgtcgat s panTro4.chr19 59315416 148 + 63644993 cgaaagtcaacagtgttacccag-aaaaaaacagggttcctttgcctggtgagtagcaaacaactcttttgagaatgcaggtgatgtggtttggctctgtgtccccacccaaatctcacctggtattgtaatgatccccacgtgtcgat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56206269 148 + 60714840 agaatgtcaacggtgttacccag-aaaaaaacagggttccttcgcctggtgagtagcaaacaactctcctgagaatgcaggtgatatggtttggctctgtgtacccacccacatctcacctggtattgtaataatccccacgtgtcggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102937126 148 - 106955855 cgaaagtcaacagtgttacccag-aaaaaaacagggttcctttgcctggtgagtagcaaatgactctcctgagaatgcaggtgatatggtttggctctacatccccacccaaatctcacctgctattgcaatgatcctcacatgtcgAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60204707 148 + 64156825 cgaatgtcaacagtgttacccag-aaaaaaacagtgttccttcgcctggtgagtagcaaacgactctcctgagaatgcaggtgatatggtttggctctgtgtccccacccaaatctcacctggtattgtaataatccccacctgtcAGT i rheMac3.chr19 C 0 I 11 s macFas5.chr19 55303031 148 + 59248254 cgaatgtcaacagtgttacccag-aaaaaaacagtgttccttcgcctggtgagtagcaaacgactctcctgagaatgcaggtgatatggtttggctctgtgtccccacccaaatctcacctggtattgtaataatccccacctgtcAGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47401532 149 + 51301725 TGAATGTCAACAGTGTTACCCAGaaaaaaaaCAGTGTTCCTTCGCCTGGTGAGTAGCAAACGACTCTCCTGAGAAtgcaggtgatatggtttggctctgtgtccccacccaaatctcacctggtattgtaataatccccacctgtcagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47097322 148 + 50890351 tgaatgtcaacagtgttacccag-aaaaaaacagtgttccttcgcctggtgagcagcaaacgactctcctgagaatgcaggtgatatggtttggctctgtgtctccaccgaaatctcacctggtattgtaataatccccacctgtcAgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45625244 146 + 49145316 agaatgtcaacagtgttagccag--aaaaaacaggtgtccttcacctggtgagtaacacaagactctcctgagaatgcaggtgatatgattttgctctgggtccccacccaaatctcacctgctattttaataatccccacatgtcat- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I a score=14302.000000 s hg38.chr19_GL949747v2_alt 373780 6 + 729520 gggggg s panTro4.chr19 59315564 6 + 63644993 gggggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56206417 6 + 60714840 aggggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102937274 6 - 106955855 Gggggg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55303179 6 + 59248254 Gggggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47401681 6 + 51301725 gggggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47097470 6 + 50890351 aggggg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45625390 6 + 49145316 gggagg i calJac3.chr22 C 0 I 3 e canFam3.chr1 19788021 11529 - 122678785 I e rheMac3.chr19 60204855 11 + 64156825 I a score=8712.000000 s hg38.chr19_GL949747v2_alt 373786 5 + 729520 cagtg s panTro4.chr19 59315570 5 + 63644993 cagtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56206423 5 + 60714840 cggtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102937280 5 - 106955855 cagtg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55303185 5 + 59248254 cggtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47401687 5 + 51301725 cggtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47097476 5 + 50890351 cggtg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45625396 3 + 49145316 I e rheMac3.chr19 60204855 11 + 64156825 I a score=603814.000000 s hg38.chr19_GL949747v2_alt 373791 284 + 729520 actcacgcctgtaatccaagcactttgggaggttgaggcaggcagatcatgaggtcagaagatcgagaccatcctggataacacagtgaaa-cccgtctctactaaaaatac------aaaaaattagccgagcgtggtggcgggcagctgtagtcccagctactcgggaggctgaggcaggagaattacttgaacctgggaggtggaggttgcagtgagctgagatcacgccgttgcactccagcctgggtgacagagcgagactccgtctcaaaa-------------taa-taataataata s panTro4.chr19 59315575 285 + 63644993 actcacgcctgtaatccaagcactttgggaggtcaaggcaggcagatcatgaggtcaggagatcgagaccatcctggataacacagtgaaaccccgtctctactaaaaatac------aaaaaattagctgagcatggtggctggcacctgtagtcccagctactcaggaggctgaggcaggagaattacttgagcctgggaggtggaggttgcagtgagctgagatcacgctgttgcactccagcctgggtgacagagcgagactccgtctcaaaa-------------taa-tagtaataata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56206428 282 + 60714840 gctcatgcctgtaatcccagggctttgggaggccgaggcgggcagataacgaggtcagaagatcaagaccatcctagctaacacagtgaaaccccgtctctactaaaaatac------aaaaaattagctgggcgtggtggcgtgcacctgtagtcccagctactcaggaggctgaagcaggagaatcgcttgaacctgggaggtggagcttgcagtgagccaagattgtgctgttgcactccagcctgggtgacagactgagactctgtctcaaaa-------------taa----taataata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102937285 284 - 106955855 actcacgcctgtaatccaagcactttgggaggtcgaggcaggcagatcacgaggtcaggagattgagaccatcctggataacacagtgaaa-cctgtctctactaaaaatac------aaaaaattagccgggcatggtggtgggcacctgtagtcccagctactccggaggttgaggcaggagaatcgcttgaacctgggaggcggaggttgcagtgagccaaggtcgtgccgttgcactccagcctgggtgacagactgagactctgtctcaaaa-------------taa-taataataata i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60204866 290 + 64156825 gctcacacctgtaatcccaccactttgggaggccgaggcgggtggatcacgaggtcaggagattgagaccatcctggctaacacggtgggaccccatctcgactaaaaatacaaaaaaaagaaattagccgggcgtggtgatgggcacctgtagtcccagctactcaggaggctgaggcagaagaatggcgtgaacccgggaggcagagcttgcagtgagccgagactgcaccactgcactccagcctgggcgacagagcgagactccgtctcaaaa-------------aaa--aataataata i rheMac3.chr19 I 11 C 0 s macFas5.chr19 55303190 303 + 59248254 gctcacacctgtaatcccaccactttgggaggccgaggcgggtggatcacgaggtcaggagattgagaccatcctggctaacacggtgagaccccatctcgactaaaaatacaaaaaaaagaaattagccgggcgtggtgatgggcacctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagccgagactgcaccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaataaataaataaa--aataataaTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47401692 301 + 51301725 gctcacacctgtaatcccaccactttgggaggccgaggcgggtggatcacaaggtcaggagattgagaccatcctggctaacacggtgagaccccatctcgactaaaaatac-aaaaaaagaaattagccgagcgtggtgatgggcacctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagccaagattgcaccactgcactccagcctgggcgacagagcgagacttcgtctcaaaaataaaaaataaa-aaa--aataataata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47097481 291 + 50890351 gctcacccctgtaatcccagcactttgggaggctgaggcgggtggatcacgaggtcaggagattgagaccatcctggctaacacggtgagaacccgtctcgactaaaaatac-aaaaaaagaaattagccgggcgtggtgatgggcacctgtagtcccagctactcaggaggctgaagcaggagaatggtgtgaacccgggaggcggagcttgcagtgagccgagatcacaccactgcactccagcctgggcgacagagcgagactccatttcaaaa-------------aaaTTAATAATAATA i chlSab2.chr6 C 0 I 2100 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45625396 3 + 49145316 I a score=3822.000000 s hg38.chr19_GL949747v2_alt 374075 2 + 729520 at s panTro4.chr19 59315860 2 + 63644993 at i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56206710 2 + 60714840 at i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102937569 2 - 106955855 at i nomLeu3.chr10 C 0 M 740 s rheMac3.chr19 60205156 2 + 64156825 at i rheMac3.chr19 C 0 I 2255 s macFas5.chr19 55303493 2 + 59248254 AT i macFas5.chr19 C 0 I 1688 s papAnu2.chr19 47401993 2 + 51301725 at i papAnu2.chr19 C 0 I 3246 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45625396 3 + 49145316 I e chlSab2.chr6 47097772 2100 + 50890351 I a score=6111.000000 s hg38.chr19_GL949747v2_alt 374077 21 + 729520 ccccacgtgtcatgggaggga s panTro4.chr19 59315862 21 + 63644993 ccccacgtgtcatgggaggga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56206712 21 + 60714840 ccccacgtgtcatgggaggga i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45625396 3 + 49145316 I e nomLeu3.chr10 102937571 740 - 106955855 M e chlSab2.chr6 47097772 2100 + 50890351 I e papAnu2.chr19 47401995 3246 + 51301725 I e macFas5.chr19 55303495 1688 + 59248254 I e rheMac3.chr19 60205158 2255 + 64156825 I a score=460110.000000 s hg38.chr19_GL949747v2_alt 374098 1064 + 729520 cctgtgggaggcgactgaatcacgggagcagg-tttttcccattctgttctcgtgatagtgaataagtctcacgagatctgatggttttataaatgggagcgcccctgcacgctctttct--tgcctgctgccatgtaagacgtgactttgctcctccttcatcttccgccatgattgttagccctccccagccaagtggaactatgagcccattaaacttctttcctttgtaaatgaaccagtctcgggtatgtctttattagcagcatgagaacaaactaatacagaggttttgatcaagaagagttttatgacttgacacagctaaggaaggcactgggtgtattcttcaaagcagtgtctccctgaggaaaagggacaggagggctctatggggtgagggagcagggagagggcgcgtcgttgtatgtggaggagggtcccagtcacgcagatgcagcgagtcgtcataccagcacacgggtcgcatgttacggtaacgagactacagctcctcccgggatggagacttgagcgcagcagtgcagaaagttcactcgggttcatctctaagttgccagggcccgtcagaggctggttccaaccaacgagtggccgcattccacacagggtttggagaaaaacaggctgcagggcagaaggctgtgaaacaggctgattgctcaagttgattaaattcctataatccctgg-agaccctccctgtctccatacaGTAGTGCTTGGGTTGAGAAATTTTCTTTAAAAGAC--TATTTTTA-gccgggcgcagtggctcacgcctgtaatcccagcacttt-gggaggccgaggcggatggatcacgaggtcaggagatcgagaccatcctggc-taacacggggagaccccgtctctactaaaaacacaca-gaaaaattagccgggcgtggtggcgggcgcctgcagtcccagctact-ggggaggctgaggcaggagaatggtgtgaa-cccgggaggtggagcttgcagtgagctg-agatcgcgcca-ctgcaccccagcctgggcgacagag---cgagact-ccgtctcaaaaa s panTro4.chr19 59315883 1034 + 63644993 cccgtgggaggcgactgaatcacgggagcagg-tttttcccattctgttctcatgatagtgaataagtctcatgagatctgatggttttataaacgggagcgcccctgcacactctttct--tgcctgctgccatgtaagacatgactttgctcctccttcatcttccgccttgattgttagccctccccagccaagtggaactatgagcccattaaacttctttcctttgtaaatgaaccagtctcgggtacgtctttattagcagcatgagaacaaactaatacagaggttttgatcaagaagagttttatgacttgacacaagtaaggaaggcactgggcgtattcttcaaagcagtgtctccctgagaaaaagggacaggagggctctatggggtgagggagcagggagagggcgtgtcattgtatgtggaggagggtcccagtcacgcagatgcagcgagtcgtcataccagcacacgagtctcatgttacggtaacgagactacagctcctcccgggatggagacttgagcacagcagtgaagaaacttcactcgggctcatctctaagttgccagggcctgtcagaagctg-------------------------------agggtttggagaaaaacaggctgcagggcagaaggctgtaaaacaggctgattgctcaagttgattaaattcctataatccctgg-agaccctccctgtctccatacaGTAGTGCTTGGGTTGAGAAATTTTCTTTAAAAGAC--TATTTTTA-gccaggctcggtggctcacgcctgtaatcccagcacttt-gggaggctgaggcgggcggatcacgaggtcaggagatcgaggccatcctggc-taacacggtgaaaccccatctctactaaaaacacacacaaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctact-ggggaggctgaggcaggagaatggtgtgaa-cccgggaggtggagcttgcagtgagccg-agatcgtgccc-ctgtactccagcctgggcgacacag---cgagact-ccgtctcaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56206733 1066 + 60714840 cccgtgggaggcaaccgaatcatgggagcaggttttttcccattctgttctcgtaatagtgaataagtctcatgagatctgatggttttataaatgggagcgcccctgcacatgctttct--tgcctgctgccatgtaagacatgactttgctcctccttcatcttccgtcatgattgtgagccctccccagccaagtggaactatgagtccattaaacttctttccttcgtaaatgaacctgtctcgggtatgtctttattagcagcatgagaacaaactaatacagaggttttgatcaagaagagttttatgacttgacacaagtatggagggcactggtcgtattcttcaaagcagtgcctcctggaggaaaagggacaggaagattctatggggtgagggagcggggagagggctcgtcattgcatgtagaggagggtcccagtcacgcagatgcagcgagtcatcataccagcgcacgggtctcatgttatggtaatgagactacagctcctcctgggatggagacttgagcacagcagtgaagaaagttcattcgggttcatctctgagttgccagggcctgtcagaagctggttccaacccatgagtggctgcattccacacagggtttggagaaaaacaggctgcagggcagaaggctgtaaaacatgctgattgctcaagttgattaaattcctataacccctggaagaccctccctgtctccctacaGTAGTGCATGGGTTTAGAAATTTTCTTTAAAAGAC----TTTTTa-gctgggcacggtggctcacgcctgtaatcccagcacttt-gggaggccgaggcgggcggatcatgaagtcaggagattgagaccatcctggcttaacacggcgagaccccatctctactaaaaatacaaaaaaaaaattagttgggcgtggtggcgggcacctgtagtcccagctact-caggaggctgaggcaggagaatcgcttgaa-ctcgggaggcagagcttgcagtgagcca-agattgtgcca-ctgcactccagcctgggtgacagag---cgagact-ctgtctcaaaaa i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45625399 1042 + 49145316 ccagtgggaggcgactgaatcatggaagcagg-tttttcccattctgttcttgtgatagtgagtaagtctcaggagatctgatggttttataaaggtgagttcctctgcacgcgctctctcctgcctgccgccatgtaagacatgcctttgctcctccttcaccttctgccatgattgtgaagcctccccagccgtgtggaactgtgagcctattaaatctctttgcattgtaaattacccagtctccggtgtgccttcattagcagcatgagaacagactaatacacagggttcgatcaataagagatttattacttgacacaagtcaggagggcactgg-tgtattcttcaaagcggtgtctccctaagggaaagtgacaggagggctctac-gggtgaggaagagaggagagggtgcgtcattgcatgtgtgggggggtcccagttacacagaggcactgagtcatcag--cagcacacgagccgc-----------------------ctcctcc-gggatggagactagagcacagcagtgaggtaagctcactc-ggttcgtctctaagttgccagggcctgtcagaagctggttccaaccaaccagtggccacattctacacagggtttgggg----acaggctgcagggcaggaggctgtaaaacaggctgattgctcaagttgattaaattcctataatcccggg-agaccctccctgcctccgtataGTAGTGCTCGGGTTGAGAAATTTTCTTTAAAAGATTTTATTTTTAggcggggtgtggtggctcatgcctataatcccagcactttggggaggccgagacaggtggatcacaaggtcaagagatcgagaccatcctggt-caacatggtgaaaccccgtctctactaaaaatac----aaaaaattagctgggcatggtggtgcgtgcctgtaatcccagctgctccgggaggctgagccaggagaattgcctgaaccccaggaggcagaggttgccgtgagctgaagatcgcgccgtttgcactccagcctgggtaacaaagagccgaaactcccgtctccaaaa i calJac3.chr22 I 3 I 3238 e canFam3.chr1 19788021 11529 - 122678785 I e nomLeu3.chr10 102937571 740 - 106955855 M e chlSab2.chr6 47097772 2100 + 50890351 I e papAnu2.chr19 47401995 3246 + 51301725 I e macFas5.chr19 55303495 1688 + 59248254 I e rheMac3.chr19 60205158 2255 + 64156825 I a score=9370.000000 s hg38.chr19_GL949747v2_alt 375162 60 + 729520 aaataaaataaaataagaataagaagaagaa-agaagaaagaagaagaagaggaagaggaa s panTro4.chr19 59316917 55 + 63644993 aaa------aaaataagaataagaagaagaagaagaggaagaggaagaagaggaagaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56207799 57 + 60714840 aaa---aataaaaaaaaagaagaaagaagaa-agaagaaagaagaagaagaagaagaagaa i ponAbe2.chr19 C 0 I 4691 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45626441 3238 + 49145316 I e nomLeu3.chr10 102937571 740 - 106955855 M e chlSab2.chr6 47097772 2100 + 50890351 I e papAnu2.chr19 47401995 3246 + 51301725 I e macFas5.chr19 55303495 1688 + 59248254 I e rheMac3.chr19 60205158 2255 + 64156825 I a score=47731.000000 s hg38.chr19_GL949747v2_alt 375222 561 + 729520 gaagaggaagaggaggaagaggaagaaaaaTGttttaaaaagactatttttagagcaggttcaggttcatagtaaaatgaggggaaggtagagattttccatgtactccctacgccgacacctacatagcttcccccattaccagcgttccctaccagagcggtatttttattacaactgatgagcctgcattgacacattgtaatcacccaaagtcatattagggctcgctcagtcttcctgttgcacatcctatgagttcaggcaaatgtctaatggcaggcacccaccgtcacagtgttagacagaggagagccattgccctaaaattcctctgtgcaccacctattcatccttccttcgcccaacccctggcagctctgatcttttcctgtctccatactttgccttttccagaatgtcatattgttggaatcagacaatgcgtagccttttcagatgggattctaccacttggtaatatgcatttaaggttcctctgtgtcttttcatggcttgagagctcatttctatctaTCTATCtatttatttatttattta s panTro4.chr19 59316972 535 + 63644993 gaagaggaagaggaggaagaggaagaaaaaTTtttttaaaagactatttttagagcaggttccggttcatagtaaaatgaggggaaggtagagattttccatgtactccctacgctgacacctacatagcttcccccattaccagcgttccctaccagagcggtatttttattacaattgatgagcctgcattgacacattgtaatcacccaaagtcatattagggctcgctcagtcttcctgttgtacatcctatgaattcaggcaaatgtctaatgacaggcatccaccgtcacagtgttagacagaggagagccattgccctaaaattcctctgtgcaccacctattcatccttccttcgcccaactcctggcagccctgatcttttcctgtctccatactttgccttttccagaatgtcatattgttggaatcagacaatgcgtagccttctcagatgggattctaccacttggtaatatgcatttaaggttcctccgtgtcttttcatggcttgagagctcatttctatc-------------------------- i panTro4.chr19 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56207856 4691 + 60714840 I e calJac3.chr22 45626441 3238 + 49145316 I e nomLeu3.chr10 102937571 740 - 106955855 M e chlSab2.chr6 47097772 2100 + 50890351 I e papAnu2.chr19 47401995 3246 + 51301725 I e macFas5.chr19 55303495 1688 + 59248254 I e rheMac3.chr19 60205158 2255 + 64156825 I a score=77862.000000 s hg38.chr19_GL949747v2_alt 375783 476 + 729520 tttatttacttatttacttatttatttatttttgagatagagtctcgctc-tgctgcccaggctggagtgcggtggctgtgatctcggctcactgcaagctccgtctcccaggttcaagcgattctcctgcctcagcctcccgagcagctgggattataggcacctgcccccacgcccggctaatttttgtatttttagt--agatggggtttcaccatgttggtcaggctggtctcgaactcctgactttagatgatccacccgcctcgatctcccaaagtgctgggattataggcgtgagccaccatgcctggcATCAtttctttttcttttcttttcttttcttttttttttttttttTGttgttgttgttgttgttgttgaggcaaagtttcactcttgtcgcccaggctggagtgcagtggcacgatctcagctccctgcaacttccgcctcccggtttcaagtgattttcctg s panTro4.chr19 59317507 456 + 63644993 ----------tatttacttatttatttatttttgagatagagtctcgctc-tgctgcccaggctggagtgcagtggctgtgatcttggctcactgcaagctccgtctcccaggttcaagcgattctcctgcctcagcctcccaagcagctgggattataggcgcctgccaccacgcccggctaatttttgtatttttagt--agatggggtttcaccatgttggtcaggctggtctcgaactcctgacttcagatgatccacccgcctcgatctcccaaagtgctgggattataggcatgagccatcatgcctggcATCATTTCTTTTTCTTTTCTTTTCTTTTAGttttttt----------ttgttgttgttcttgttgttgaggcaaagtttcactcttgtcgcccaggctggagtgcagtggcacgatctcggctccctgcaacttccgcctcccggtttcaagtgattttcctg i panTro4.chr19 C 0 C 0 s macFas5.chr19 55305183 390 + 59248254 TCTGtttgtttgtttgcttatttg-----ttttaagacggagtttcgctcttgtcgcccagtctggagtgcagtggc-acgatctcgactccctgcaacctccgcctcccgggttcaagctattcccctgcttcagcctcctgagtagctgggattacaggcatgagccaccgtgcctggctaatttttgtatttttagtagagatgggttttcgccatgttggccaggctggtctcgaactcctgacctt--gtgatctgccagccttggcctcccaaagtgctgggattacaggcgtgagccaccacacctggc-----------------------------------------------taatttttgtagttttagtagagacggggtttcac-cgtgttggccaggctag---------------tcttgaactcctg-acctT-----------------gtgatctgccag i macFas5.chr19 I 1688 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56207856 4691 + 60714840 I e calJac3.chr22 45626441 3238 + 49145316 I e nomLeu3.chr10 102937571 740 - 106955855 M e chlSab2.chr6 47097772 2100 + 50890351 I e papAnu2.chr19 47401995 3246 + 51301725 I e rheMac3.chr19 60205158 2255 + 64156825 I a score=130366.000000 s hg38.chr19_GL949747v2_alt 376259 272 + 729520 cctcagcctcccaagtagctgggattacaggcgcctgccaccacgcctggttaatttttgtatttttagtagagat-gggtttccccatgttggccaggctggtcttgaactcctgaccctgtgatctgtgggccttggcctcccaaagtgctgggattacagatgtgagccaccgtgactggctaatttttgtgtttttagtagagatggggtttcgccatgttggctaggctggtctcgaactcctgaccttgtgatccgcccgcttcggc s panTro4.chr19 59317963 272 + 63644993 cctcagcctcccaagtagctgggattacaggcgcctgccaccacgcctggttaatttttgtatttttagtagagac-gggtttccccatgttggccaggctagtctcgaactcctgaccttgtgatctggttgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacacttggctaatttttgtatttttagtagagatggggtttcgccatgttggccaggctggtctcgaactcctgaccttgtgatccgcccgcatcggc i panTro4.chr19 C 0 C 0 s macFas5.chr19 55305573 273 + 59248254 ccttggcctcccaaagtgctgggattacaggcgtgcaccaccacacctggctaatttttgtatttttagtagagacggggtttcaccgtgttggccaggctagtcttgaactcctgaccttgtgatctgctcgcctcagcctcccaaagtgctgggattacaggcgtgagccaccacacctggctaatttttgtatttttagtagagatggggtttcgccatgtaggccaggctagtctcgaacttctgaccttgtgatccgctcgcctcagc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47099872 273 + 50890351 cctcagcctcccaaagtgctgggattacaggcgtgcaccaccacacctggctaatttttgtgttttcagtagagacggggtttcgccatgttggccagacgagtctcaaactcctgaccttgtgatccgctagcctcagcctcccaaagtgctgggattacaggcgtgagccaccacacctggctaatttttgtatttttagtagagacggggtttcgccatgttggccagacgagtctcaaactcctgaccttgtgatccgctcgcctcagc i chlSab2.chr6 I 2100 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56207856 4691 + 60714840 I e calJac3.chr22 45626441 3238 + 49145316 I e nomLeu3.chr10 102937571 740 - 106955855 M e papAnu2.chr19 47401995 3246 + 51301725 I e rheMac3.chr19 60205158 2255 + 64156825 I a score=28742.000000 s hg38.chr19_GL949747v2_alt 376531 32 + 729520 ctcccaaagtgctgggattacaggcatgagcc s panTro4.chr19 59318235 32 + 63644993 ctcccaaagtgctgggattacaggcatgggcc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60207413 32 + 64156825 ctcccaaagtgctgggattacaggcttgagcc i rheMac3.chr19 I 2255 C 0 s macFas5.chr19 55305846 32 + 59248254 ctcccaaagtgctgggattacaggcttgagcc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47100145 32 + 50890351 ctcccaaagtgctgggattacaggcgtgagcc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56207856 4691 + 60714840 I e calJac3.chr22 45626441 3238 + 49145316 I e nomLeu3.chr10 102937571 740 - 106955855 M e papAnu2.chr19 47401995 3246 + 51301725 I a score=75489.000000 s hg38.chr19_GL949747v2_alt 376563 86 + 729520 acTAGAGTCTCTTTGTGAAAAGGAATGGAAGGATGTGGTGTGATGCAGCACGCATCACCAGGTCCCTGTCATAAATTTGCTTTTGT---------------------------------------------------------------------- s panTro4.chr19 59318267 86 + 63644993 acTAGAGTCTCTTTGTGAAAAGGAATGGAAGGATGTGGTGTGATGCAGCACACATCACCAGGTCCCtgtcataaatttgctttcgt---------------------------------------------------------------------- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60207445 84 + 64156825 acTAGAGTCTCTC--TGAAAAGGAATGGGAGGATGTGGCGTGATGCAGGACACAGCACCAGGTCCTtgtcataaatttgcttttgt---------------------------------------------------------------------- i rheMac3.chr19 C 0 I 977 s macFas5.chr19 55305878 84 + 59248254 acTAGAGTCTCTC--TGAAAAGGAATGGGAGGATGTGGCGTGATGCAGGACACAGCACCAGGTCCTtgtcataaatttgcttttgt---------------------------------------------------------------------- i macFas5.chr19 C 0 I 77 s chlSab2.chr6 47100177 84 + 50890351 GCTAGAGTCTCTC--TGAAAAGGAATGGGAGGATGTGACGTGATGCAGGACACAGCACCAGGTCCTtgtcataaatttgcttttgt---------------------------------------------------------------------- i chlSab2.chr6 C 0 I 982 s calJac3.chr22 45629679 138 + 49145316 ACTGGAGGCTCTTGGTGAAAAGGAATGGGAG------------------ACATGTCACCAGGTCCTtgtcacaaagttgctttcgttgctaccattctgaggcctgggacaagttgataagctgtttcaaatccagttgtactcccatcaccctCT i calJac3.chr22 I 3238 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56207856 4691 + 60714840 I e nomLeu3.chr10 102937571 740 - 106955855 M e papAnu2.chr19 47401995 3246 + 51301725 I a score=10444.000000 s hg38.chr19_GL949747v2_alt 376649 21 + 729520 ggccgggcgcggtggctcacg s panTro4.chr19 59318353 21 + 63644993 ggccgggcgcggtggctcacg i panTro4.chr19 C 0 I 393 s macFas5.chr19 55306039 21 + 59248254 gaccgggcgcggtggctcaca i macFas5.chr19 I 77 C 0 s calJac3.chr22 45629817 21 + 49145316 ggccgggggcagtggctcaca i calJac3.chr22 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56207856 4691 + 60714840 I e nomLeu3.chr10 102937571 740 - 106955855 M e chlSab2.chr6 47100261 982 + 50890351 I e papAnu2.chr19 47401995 3246 + 51301725 I e rheMac3.chr19 60207529 977 + 64156825 I a score=118962.000000 s hg38.chr19_GL949747v2_alt 376670 280 + 729520 cctgtaat----cccagcactttgggaggctgaggcaggcggatcccctgaggtcaggagatcgagaccagcctagccaacatggcgaaaccccatctctactaaaaatacaaaaaattagccgggcgtggtggcaggcacctgtag-tcccagccactcgggaggctgaggcaggagaatagtttgaacccgggaggcggaacttgcagtgagccgaga-----ttgctgcactccagcctgagcgacagagcgagactctgtctcaaaacaaaacaaaaaaaGCTTAC s panTro4.chr19 59318767 280 + 63644993 cctgtaat----cccagcactttgggaggctgaggcaggcggatcccctgaggtcaggagatcgagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaaattagccaggcatggtggcaggcacctgtag-tcccagccactcgggaggctgaggcaggagaatcgtttgaacccaggaggcggagcttgcagtgagccgaga-----tggctgcactccagcctgagcgacagagcgagactctgtctcaaaacaaaacaaaaaaaGCTTAC i panTro4.chr19 I 393 C 0 s macFas5.chr19 55306060 289 + 59248254 tctgtaatcccacccagcaggttgggaggctgaggtgggcggatcacctgaggtcagaagttcaagaccagcctggccaacatggggaaaccctgtctctactaaaaatac-aaaaattagccaggtgtggtggtacatgcctgtaattcccagcgacttgggaggctgaggcagcagaatcacttcaacccgggaggcggagtttgcagtgagccaagagcatgccgttgcactccagcctaggcaacagagtgagactctgtctcaaaaaaaaagaagttgaactcac i macFas5.chr19 C 0 I 593 s calJac3.chr22 45629838 283 + 49145316 cctgtaatcccacccagcacgttgggaggccggggtgggcggatcacttgaggtcagaagttcaagaccagcctggccaacatgggaaaatcccgtctccactaaaaatac-aaaaatcagccaggcgtggtggtgcacacctgtaa-ccccagctacttgggaggctgaagcaggagaatggcttgaacccaggagggggatgtcatggtgagccgaga-----ttgccacactccagcctgagcaatagagcgagactctttctcaaaacaaaccaaaaaaaGCTTAC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56207856 4691 + 60714840 I e nomLeu3.chr10 102937571 740 - 106955855 M e chlSab2.chr6 47100261 982 + 50890351 I e papAnu2.chr19 47401995 3246 + 51301725 I e rheMac3.chr19 60207529 977 + 64156825 I a score=280599.000000 s hg38.chr19_GL949747v2_alt 376950 1306 + 729520 CCTCCatgatgcagcaatcccactactgggtatatgctcaaagaaactgaaaccagtgtgtggaagagatgtctgcacccctatgtgta-ttgcagagttattcacaatagccaacatatggaatcacctaagtctccatcagtggacaatgggtaaaggaaatgtatatatacacagtggaa----------atactatccagccttagaaaggaaggaaaccctgtcatttacagtatggatgtaattgtcaaccttcaggacatcatgccacatgaaataagccagatacagaaagacaaatatcgcacaacctcacttatacatggaatattaaaaagttgaactcaggccttcgagactagccatggccaacatggcaaaaccTACTCGGGAggctgggcacggtggctcacgcctgtca-----gcactttgggagaccaaggcgggcagatcacctgaggttgggagttcgagaccagcctgaccaatatggagaaaccccgtctctactaaaaattcaaaattagccaggcgtggtggtgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatggcttgaacctgggaggcggaggttgcagtgagccgagattgcgccactgcactccagcctgggcgac-agagtgagactctgtctcaaaaaaaaaaaaaaaaaaaaagttgaactcacagaagcagagagcggaatggtggtgaccaggggcttgggaaggggagtagggattgggaagatcgtggtcagagggtacacaattttagatagaaaaaaataaattcaagagatctgttgtgcaacatggtgacaaattagtgaaaatgtattatgtacttaaacattgttagcagaatagatcgtaagggctctcgccacacacgcaaaaatgacaactatgtggccacgaacggtggctcacacctataatccaagcactttgggaggctgaggcaagtggatcacttgaggtcagcagtttgagaccagcctgggcaacatggccaaaccccatctctacaaaaaatacaaaaattagccagacgtggtggcacacacctgtaatcccagctactcgggaggctgaggcacaagaatcacttg-acgtgggaggtggagtttgccgtgagctgagatcgcaccactgcactctaggctgagtgacagaatgagactctgtctcag---aaaaaaaagtgaggtgatggatatgttaaacatcttgattatggtaattatttcacaatgtgtacatatgtcaaaacatcatgttgtacaccttaaatatataca s panTro4.chr19 59319047 1306 + 63644993 CCTCCatgatgcagcaatcccactactgggtatatgcccaaagaaactgaaaccagtgtgtggaagagatgtctgcacccccatgtgta-ttgcagagttattcacaatagccaacatatggaatcacctaagtctccatcagtggacaatgggtaaaagaaatgtatatatacacagtggaa----------atactatccaggcttagaaaggaaggaaaccctgtcatttacagtatggatgtaactgtcaaccttcaggacatcctgccacatgaaataagccagatacagaaacacaaatatcgcacaacctcacttatacatggaatattaaaaagttgaactcaggccttcgagactagccatggccaacatggcgaaaccTACCTGGGAggctgggcgcagtggctcacgcctgtcatctcagcactttgggagaccaaggcgagcagatcacctgagattgggagttcgagaccagcctgaccaatatggagaaaccccgtctctgctaaaaattcaaaattagccgggcgtggtggtgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatggcttgaacctgggaggtggaggttgcagtgagctgagattgcgccactgcactccagcctgggcgac-agagtgagactctgtctcaaaaaaaaaaaaaaaa-----gttgaactcacagaagcagagagcggaatggtggtgaccaggggcttgggaaggggagtagggattgggaagatcgtggtcagagggtacacaattttagatagaaaaaaataaattcaagagatctgttgtgcaacatggcgacaaattagtgaaaatgtattatgtacttacacattgttagcagaatagatcgtaagggcttttgccacacacgcaaaaatgacaactatgtggccacgaacggtggctcacacctataatcccagcactttgggaggctgaggcaagtggatcacttgaggtcagcagttcgagaccagcctgggcaacatggccaaaccccatctctacaaaaaatacaaaaattagccaggcgtggtggcacacacctgtaatcccagctactcgggaggctgaggcacaagaatcacttg-acctgggaggtggaggttgccgtgagccgagatcgcaccactgcactctaggctgagtgacagaatgagactctgtctcag---aaaaaaaagtgaggtgatgaatatgttaaacatcttgattatggtaattatttcacaatgtatacatatgtcaaaacatcatgttgtacaccttaaatatataca i panTro4.chr19 C 0 C 0 s calJac3.chr22 45630121 1249 + 49145316 CCTCtgtgatgcagcaatcccactactgggtatgtacccaaagaaactgaaacccatgtgtggaagagatgtctgcacccccatatgtatttgcagcattattcacaatagatgagatagggaatcacccagggctccatcagtgggcagtggagaaaggaaatgtttatatacacagtggaaacgcatatatacactacccagcctcagaagggaaggaaacccagtcattcacaacatggatgtaatcgtaaacctgaaggacattgtgccatgtgaaataagcgggacacagaaaggcaaataccgtgcaacctcacttacacatggaatattaaaaagttgaactc-----------------------------------------------ggccgggcgcggtgggtcaagcctgtaatcccagcactttgtgaggccgaggcgggtggatcac--gaggtcaagagatcgagaccatcctggtcaacatggtgaaaccccgtctctactaaaaatacaaaa-----------aattagtgcatgcctgtaatccaagctactcaggaggctgaggcaggagaattgcctgaacccaggaggcggaggttgcggtgagccgagatcgcgccattg-----cagcctgggtaacaagagcgaaactccatctcaaaaaaaaaaaaaaaa----agttgaactcacagaagcagagagcagaatggtggctaccagaggcttggggagggggttaggaattgcggagatcatggtcaaagggt--acaattttagatagaaaaaag-aagttcaagatacctatggtgcaacatggtgactaattagtggaaacgcattctgtacttaaacattgctaagagagtagatcctatgggctctcaccacacacccaaaaatgacaactatgtggccgggaaaggtggctcatacctgtaatcccagcattttaggagggcgaggcaagcagatcgcttgaggtcaggagtt-gagaccagcctgggcaacatggcaaaaccccatgtctatgaaaaatgcaaaaattatctgggcatggtggcgcacacctgtgatcccagctacttgggaggctgaggcacaagaattgcttgaacctgggaggtacaggttgcagtgagccaagatcgtgccaccacactccagcctgggtgactgagtgaga--ctatctcagaaaaaaaaaaaatgaggtgagaggtatgttacacatcttgattatggtaattatttcacgatgtatacatatgtcaagacatca---tgtacaccttaaatatataca i calJac3.chr22 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56207856 4691 + 60714840 I e nomLeu3.chr10 102937571 740 - 106955855 M e chlSab2.chr6 47100261 982 + 50890351 I e papAnu2.chr19 47401995 3246 + 51301725 I e macFas5.chr19 55306349 593 + 59248254 I e rheMac3.chr19 60207529 977 + 64156825 I a score=14551.000000 s hg38.chr19_GL949747v2_alt 378256 158 + 729520 cttctctttttgagacggagtctcgctctgtcgcccaggctggagtgcagtggcgcaatctcggctcactgcaatctccgcctcccggcttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcgcccggctaatttttgtatt s panTro4.chr19 59320353 158 + 63644993 cttctttttttgagacggagtctcgctctgtcgcccaggctggagtgcagtggtgcaatctcggctcactgcaatctccgcctcctggcttcacaccattctcctgcctcagcctcccaagtagctgggactacaggcacccggctaatttttgtatt i panTro4.chr19 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56207856 4691 + 60714840 I e calJac3.chr22 45631370 0 + 49145316 C e nomLeu3.chr10 102937571 740 - 106955855 M e chlSab2.chr6 47100261 982 + 50890351 I e papAnu2.chr19 47401995 3246 + 51301725 I e macFas5.chr19 55306349 593 + 59248254 I e rheMac3.chr19 60207529 977 + 64156825 I a score=31638.000000 s hg38.chr19_GL949747v2_alt 378414 127 + 729520 tttttttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgaccttgtgatccacccgcctcggcctcccaaaatgctgggattacaggcatgagccaccgcgcctgacc s panTro4.chr19 59320511 125 + 63644993 ttttttt--agtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgaccttgtgacccacccgcctcggcctcccaaagtgctgggattacaggcatgagccaccgcgcctgacc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102938325 127 - 106955855 TTTTtttttggtagagacagggtttcaccatgttagccaggatggtcttgatctcctgacctcgtgatccacacacctcggcctcccaaagtgctgggattacaggcatgagccaccacacccgAAC i nomLeu3.chr10 M 740 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56207856 4691 + 60714840 I e calJac3.chr22 45631370 0 + 49145316 C e chlSab2.chr6 47100261 982 + 50890351 I e papAnu2.chr19 47401995 3246 + 51301725 I e macFas5.chr19 55306349 593 + 59248254 I e rheMac3.chr19 60207529 977 + 64156825 I a score=16048.000000 s hg38.chr19_GL949747v2_alt 378541 11 + 729520 aaatatatacg s panTro4.chr19 59320636 11 + 63644993 aaatatatatg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102938452 11 - 106955855 aaatatatatg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60208506 11 + 64156825 aaatatatcca i rheMac3.chr19 I 977 C 0 s macFas5.chr19 55306942 11 + 59248254 aaatatatcca i macFas5.chr19 I 593 C 0 s papAnu2.chr19 47405241 11 + 51301725 aaatatatccA i papAnu2.chr19 I 3246 C 0 s chlSab2.chr6 47101243 11 + 50890351 aaatatatcca i chlSab2.chr6 I 982 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56207856 4691 + 60714840 I e calJac3.chr22 45631370 0 + 49145316 C a score=2198281.000000 s hg38.chr19_GL949747v2_alt 378552 984 + 729520 cttttatttgtcaatcatatctcaattaagcCAGGAAAaa-attggtaaggctacttttggaaacactttgacactatttcaaaaaattgaaactaacaatccctatagcgcaatcattccattcttatatgtatactctttaaaaattcttgcacatatgcaccaagaaacatgt-aaaaaatgtctgttacgtaatagggaaagtaaaataaatagaaatagaaaagtaactaaaataaaagaagcccatgtgttcatcaacaggtacaaaaatacaaaaactgtgatatagacctatattggaaagcttcaaactatggcattgaaaatgatttcacgaatcatttcaaaaaaaaattcatggt-ttctgttgtcatttttaccaagttcattccaatatgtggtttagagacactattttaaacaaataaggggccaggtgcagtggctcacgcctataatcccagcac-tttgggaggctgaggcgggcagatcacctgaggtcaggagtttgagaccagcctggacaacatggtgaaa--------ccccgtctctactgaaaatacaagaattagccaggcatggtggtgcgcgcctgtaatcccagctcttcgggaggctgaggcaggagaattacttgaacctgggaggcagagtttgcagtgagccgagatcattccaccgcactccagcctgggcaacagtgtgagactctgtctcagaactta----------aagtagaataaaataaaat-aat-----------------------------------------------aaaat---aaaacaaataagggaacgacaagcacagttacttctgcagaggaggaaagtggaggatgagaatggaaggagattccaggtagatgaggtggtcgggatgagattgtagctcttaat-tggatggtgggctAAGTGAGGCCGTTTCGTTAATGTTTCATGATTCAAGCTGTTTTATAAATTCTCTTTTATTTATGAAAAATACATAATACATGTTTGGTAAAGTGATCAAACTTT s panTro4.chr19 59320647 983 + 63644993 cttttatttgtcaatcatatctcaattaagcCCGGAAAaa-attggtaaggctacttttggaaacactttgacactatttcaaaaaattgaaactaacaatccctatagtgcaatcattccattcttatatgtatactctttaaaaattcttgcacatatgcaccaagaaacatgt-aaaaaatgtctgttacgtaatagggaaagtaaaataaatagaaatagaaaagtaactaaaataaaagaagcccatgtgtccatcaacaggtacaaaaatacaaaaactgtgatatagacctatattggaaagcttcaaactatggcattgaaaatgatttcacgaatcatttcaaaaaaaa-ttcatggt-ttctgttgtcatttttaccaagttcattccaatatatggtttagagacactattttaaacaaataaggggccaggtgcagtggctcacgcctataatcccagcac-tttgggaggctgaggcgggcagatcacctgaggtcgggagtttgagaccagcctggacaacatggtgaaa--------ccccgtctctactaaaaatacaagaattagccaggcgtggtggtgcgcgcctgtaatcccagctcttcgggaggctgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagccgagatcatgccactgcactccagcctgggcaacagtgtgagactctgtctcagaactta----------aagtagaataaaataaaat-aat-----------------------------------------------aaaat---aaaacaaataagggaacgacaagcacagttacttctgcggaggaggaaagtggaggatgagaacggaaggagattccaggtagatgaggtggtcgggatgagattgtagctcttaat-tggatggtgggctaagtgaggccgtttcgttaatgtttcattattcaagctgttttataaattctcttttatttatgaaaaatacataataCATGTTTGGTAAAGTGATCAAACTTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102938463 980 - 106955855 cttttatttgtcaatcatatctcaattaagctgggaaaaa-attggtaaggctacttttggaaacactttgacactatttcaaaaaattgaaactaacaatccctacagcacaatcattccattcctatatgtatactcttaaaaaattcttgcacatatgcaccaagaaacatgtaaaaaaatgtctgttacataatagggaaagtaaaataaatagaaatggaaaagtaactaaaataaaagaaacccatgtgtccatcaacaggtacaaaaatacaaaaactgtgatatagacctatattggaaagcttcaaactatggcattgaaaatgaTTTCACGAATAATTTCAAAAAAAC-TTCATGGT-TTCTGTTGTCATTTTTACCAAGTTCATTCCAATATATGGTTTAGAGACACTATTTTAAACAAATAAGGggccaggtgcagtggctcacgcctataatctcagcac-tttgggaggccaaggcgggcagatcacctgaggtcaggagtttgagaccagcctggacaacatggtgaaa--------ccccgtctctactaaaaatacaagaattagccgagcgtggtggtgtgcacctgtaatcccagcttttcgggaggctgaggcaggagaatcacttgaacccgggag-----ggttgcagtgagccaagatcacaccattgcactccagcctggatgacagtgtgagactctgtctcagaactta----------aagtagaataaaacaaaataaat-----------------------------------------------aaaaT---AAAACGAATAAGGGAATGACAAGCACAGTTACTTCTGCAGAGGAGGAAAGTGGAGGATGAGAACGGAAGGAGATTCCAGGTAGATGAGGTGGCCGGGATAAGATTGTAGCTCTTCAT-TGGATGGTGGGCCAAGTGAGGCCATTTCGTTAATGTTTCATGATTTACGCTGTTTTATAGATTCTCTTTTATTTATGAAAAATACATAATACATGTTTGGTAAAGTGATCAAACTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60208517 1048 + 64156825 ctcttatttgtcaatcatatctcaattaagctgggaaaaa-attggtaaggctacttttggaaatattttgacactatttcaaaaaattgaaactaacaatccctatagcacgatcattccattcctatatgtatcctctaaaaaaattcttgcacatatgcaccaagaaacatgt-aaaaaatgtctgttacataatagggaaagtaaaataaatagaaatagaaaagtaac-----taaaagaaactcgtgtgtccatcaacaggtacaaaaatacaaaaactgtgatgtagacctatattggaaagcttcaaacgatggcattgaaaatgaTCTCACGAATCATATCAAAAAAAACTTCATGAT-TTTTGTTGTCATTTTTACCAAGTTTATTCCAATATGTGGTTTAGAGATACTATTTTAAACAAATAAGAggccaggtacagtggctcacgcctacaatcccagcacttttgggaggccaaggcgggcagatctcctgagttcaggagcttgagaccagcctggccaacatggtgaagtactgtctccctgtctctactaaaaatacaaaaattagctgggcgtggtggtgggcacctgtaatcccagctctttgggaggctgaggcaggaaaattgcttgaacccgggaggcagaggtcgcagtgagcccagatcacgccattacactccagcctaggctacagtgtgagactctgtcttaGaaaataaaataaaataaaataaaataaaataaaat-aaaataaaataaaataaaataaaataaaataaaataaaataaaataaaataaaataaaaAAATGAATAAGAGAACGACAAACATAATTACTTCTGCAGAGGAGGAAAGTGGAGGATGAGAATGGAAGGAGATTCTGGGTAGATGAGGTGGTCGAGATAAGATTGTAGCTCTTAAT-TGGATGGTGGGCTAAGTGAGGCCATGTCATTAATGTTTCATTATTTAAGCTGTTTTATAGATTCTCTTTTATTGATGAAAAATACATAATATGTGTTTGGTAAAGTGATCAAACTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55306953 998 + 59248254 ctcttatttgtcaatcatatctcaattaagctgggaaaaa-attggtaaggctacttttggaaatactttgacactatttcaaaaaattgaaactaacaatccctatagcacgatcattccattcctatatgtatcctctaaaaaaattattgcacatatgcaccaagaaacatgt-aaaaaatgtctgttacataatagggaaagtaaaataaatagaaatagaaaagtaac-----taaaagaaactcgtgtgtccatcaacaggtacaaaaatacaaaaactgtgatgtagacctatattggaaagcttcaaacgatggcattgaaaatgaTCTCACGAATCATATCAAAAAAAACTTCATGAT-TTTTGTTGTCATTTTTAGCAAGTTTATTCcaatatgtggtttagagatactattttaaacaaataagaggccaggtacagtggctcacgcctataatcccagcacttttgggaggccaaggcgggcagatctcctgagttcaggagcttgagaccagcctggccaacatggtgaagtcctgtctccctgtctctactaaaaatacaaaaattagctgggcgtggtggtgggcacctgtaatcccagctctttgggaggctgaggcaggagaattgcttgaacccgggaggcagaggtcgcagtgagcccagatcacgccattacactccagcctaggctacagtgtgagactctgtcttagaacataaaataaaataaaataaaataaaataaaat-aaa-----------------------------------------------aaaat---aaaatgaataagagaacgacaaacataattacttctgcagaggaggaaagtggaggatgagaatggaaggagattctgggtagatgaggtggtcgagataagattgtagctcttaat-tggatggtgggctaagtgaggccatgtcattaatgtttcattatttaagctgttttatagattctcttttattgatgaaaaatacataataTGTGTTTGGTAAAGTGATCAAACTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47405252 999 + 51301725 CTCTTATTTGTCAATCATATCTCAATTAAGCTGGGAAAAA-ATTGGTAAGGCTACTTTTGGAAATACTTTgacactatttcaaaaaattgaaactaACAATCCCTATAGCACGATCATTCCATTCCTATATGTATCCTCTaaaaaaaTTCTTGCACATATGCACCAAGAAACATGt-aaaaaatgtctgttacataatagggaaagtaaaataaatagaaatagaaaagtaactaaaataaaagaaactcgtgtgtccatcaacaggtacaaaaatacaaaaactgtgaTGTAGACCTATATTGGAAAGCTTCAAACGATGGCATTGAAAATGATCTCACGAATCATATC-aaaaaaaCTTCAtgat-ttttgttgtca-ttttaccAAGTTTATTCCAATATGTGGTTTAGAGAtactattttaaacaaataagaggccaggtacagtggctcacgcctataatcccagcac-tttgggaggccgaggcgggcagatctcctgagttcaggagcttgagaccagcctggccaacatggtgaagtcctgtctccctgtctctactaaaaatacaaaaattagctgggcgtggtggcgggcacctgtaatcccagctctttgggaggctgaggcaggagaattgcttgaacccgggaggcagaggttgcagtgagcccagatcacgccattacactccagcctaggctacagtgtgagactctgtcttagaacttaaagtaaaat-aaataaaataaaataaaat-aaa-----------------------------------------------aaaat---aaaatgaacaagagAATGACAAGCACAGTTACTTCTGCAGAGGAGGAAAGTGGAGGATGAGAATGGAAGGATATTCTGGGTAGATGAGGTGGTCGAGATAAGATTGTAGCTCTTAAT-TGGATGGTGGGCTAAGTGAGGCCATGTCATTAATGTTTCATTATTTAAGCTGTTTTATAGATTCTCTTTTATTgatgaaaaatacataatatgtGTTTGGTAAAGTGATCAAACTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47101254 997 + 50890351 ctcttatttgtcaatcatatctcaattaagctgggaaaaa-attggtaaggctacttttggaaacactttgacactatttcaaaaaattgaaactgacaatccctatagcacgatcattccattcctatatgtatcctctaaaaaaattcttgcacatatgcaccaagaaacacgt-aaaaaatgtctgttacataatagggaaagtaaaataaatagaaatagaaaagtaactaaaataaaagaaactcatgtgtccatcaacaggtacaaaaatacaaaaactgtgatatagacctatattggaaagcttcaaacgatggcattgaaaatgaTCTCACGAATCATTTCAGAAAAAACGTCATGAT-TTTTGTTGTCATTTTTACCAAGTTTATTCcaatatgtggtttagagatactattttaaacaaataaggggccaggtacagtggctcacgcctataatcccagcac-tttgggaggccgaggcgggcagatctcctgagttcaggagtttgagaccagcctggccaacatggtgaagccctgtctccctgtctctactaaaaatacaaaaattagctgggtgtagtggtgggcacctgtaatcccagctcttcgggaggctgaggcaggagaattgcttgaaccagggaggcagaggtcgcagtgagcccagatcacgtcattgcactccagcctgggctacagtgtgagactctgtcttagaacttaaagta-----aaataaaataaaataaaat-aat-----------------------------------------------aaaat---aaaatgaataagagaacgacaagcacaattacttctgcagaggaggaaagtggaggatgagaatggaaggagattccgggtagatgaggtggtcgagataagattgtagctcttaat-tggatggtgggctaagtgaggccatgtcattaatgtttcattatttaagctgttttatagattctcttttattgatgaaaaatacataataTGTGTTTGGTAAAGTGATCAAACTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45631370 970 + 49145316 cttttatttgtcaattacatctcaagctgggggggaaaaataatggcaagactacttttggaaacactttgacactatttcagaaaattg--actaacaatcacgatagcgcaattattccattcctatacgtatactctaaaaaaattccttcacatatgcaccaagaaacatat-ataaaatgcctgttacataacagagaaagtaaaataaata------gaaaagtaactaaaataaaagaaacccatgtgtccatcaacaggtacaaaaatacagaaactgtgatagagaactatactggaaagcttcaaactat-gcattgaaaatgaTTTCACGAATCATTTCGGAAAAAC-TTCATGGTGTTTTTTTGTCATTTTTATCAAGTTCAATCCCAAATGTGGTTTAGAGACACTATTTAAAACGAATAAGGggccgggggcggtggctcactcctgtaatcccagcac-tttgggaggctgaggcgggcagatcactggaggtcaggagttcaagaccagcctggccaacatggtgaaa--------ccccatctctattaaaaatacaaaaattagccaggcgtggtggcgggcgtctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaactcaggaggcagaggttgaggtgagctgagatcacaccattgcacctcagtttgggtgac--tgtgggattctgtctcagaactta----------aagtaaaataaaataaaat-aat-----------------------------------------------aaaaa---gaa---aacaaGGGAAGGACAAGCAtagttacttccacagaggaggaaa--ggaggatgagaatggaaggagattccaggtagatggagtggccaggataagattgtagctcttaatctgtatggtgggctaagtgaggccacatcattaatgtttcattatttatgctgttttatagattctcttttatttatgaaaaatacataataTGTGTTTGGTAAAGTGATCAAACTtt i calJac3.chr22 C 0 I 4715 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56207856 4691 + 60714840 I a score=69181.000000 s hg38.chr19_GL949747v2_alt 379536 40 + 729520 CTTGATCAAGATATCAAAAGAAAGACCCAAGATTTTAttt s panTro4.chr19 59321630 40 + 63644993 CTTGATCAAGATATCAAAAGAAAGACCCAAGAttttattt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102939443 40 - 106955855 CTTGATcaagatatcaaaagagaaagccaagattttattt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60209565 40 + 64156825 CTTGATGaagatatcaaaagagagacccaagactttattt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55307951 40 + 59248254 CTTGATGAAGATATCAAAAGAGAGACCCAAGACTTTATTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47406251 40 + 51301725 CTTGATGAAGATATCAAAAGAGAGACCCAagacttcattt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47102251 40 + 50890351 CTTGATGAAGATATCAAAAGAGAGACCCACGACTTTATTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56207856 4691 + 60714840 I e calJac3.chr22 45632340 4715 + 49145316 I a score=1117.000000 s hg38.chr19_GL949747v2_alt 379576 13 + 729520 ----tctatttct----ttct s panTro4.chr19 59321670 10 + 63644993 ----tctatttct-------t i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102939483 17 - 106955855 ----tctatttcctttttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60209605 13 + 64156825 tctctttatttct-------- i rheMac3.chr19 C 0 I 4880 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56207856 4691 + 60714840 I e calJac3.chr22 45632340 4715 + 49145316 I e chlSab2.chr6 47102291 0 + 50890351 C e papAnu2.chr19 47406291 0 + 51301725 C e macFas5.chr19 55307991 0 + 59248254 C a score=37678.000000 s hg38.chr19_GL949747v2_alt 379589 151 + 729520 ttttctttttttgagacggagtctcaccctgtcacccaggctggagtgcagtggctcgatctcagctcactgtaagctccacctcccgggttcacgccattctcctgcctcagcctcctgagtagctgggactacaggcacccgccaccac s panTro4.chr19 59321680 151 + 63644993 ttttttttttttgagacggagtctcgccctgtcacccaggctggagtgcagtggctcgatctcagctcactgcaagctccacctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcacccgccaccac i panTro4.chr19 C 0 I 324 s nomLeu3.chr10 102939500 150 - 106955855 ttttttttttttgagatggagtctcgctctgtggcccaggctggagtgcggtggcgcgatctcagctcactgcaagctccacctcccgggttcatgccattcttctgcctcagcctcctgagta-ctgggactacagccacctgccactgc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56207856 4691 + 60714840 I e calJac3.chr22 45632340 4715 + 49145316 I e chlSab2.chr6 47102291 0 + 50890351 C e papAnu2.chr19 47406291 0 + 51301725 C e macFas5.chr19 55307991 0 + 59248254 C e rheMac3.chr19 60209618 4880 + 64156825 I a score=31436.000000 s hg38.chr19_GL949747v2_alt 379740 130 + 729520 gcctggctaattttttgtatttttagtagagatggggtttcattg------------tggtgtcaatctcctaacctcctgatccacccgcctcggcctcccaaagtgctgagattacaggcgtgagccactgcacccggcc s panTro4.chr19 59322155 130 + 63644993 gcctggctaattttttgtatttttagtagagatagggtttcactg------------tggtctcaatctcctgacctcctgatccacccgcctcggcctcccaaagtgctgagattacaggcgtgagccaccgcgcccggcc i panTro4.chr19 I 324 C 0 s nomLeu3.chr10 102939650 142 - 106955855 gcctggctaattttctgtatttttagtagagacagggcttcaccgtgttagccaggatggtcttgatctcctgacctcgtgatccacccgccttggcctcccaaagtgctgggattacaggtgtgagccactgcgcccggcc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56207856 4691 + 60714840 I e calJac3.chr22 45632340 4715 + 49145316 I e chlSab2.chr6 47102291 0 + 50890351 C e papAnu2.chr19 47406291 0 + 51301725 C e macFas5.chr19 55307991 0 + 59248254 C e rheMac3.chr19 60209618 4880 + 64156825 I a score=122838.000000 s hg38.chr19_GL949747v2_alt 379870 92 + 729520 TCTCTTTATTTCTATAtgtatcagttagctattgctgtgtaacaaatcacctcaaagggagcagcttcagacaacacacgtttattgtcttg s panTro4.chr19 59322285 92 + 63644993 TCTCTTTATTTCTATAtgtatcagttagctattgctgtgtaacaaatcacctcaaagggagcagcttcaaacaacacacgtttattatcctg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102939792 92 - 106955855 tctctttatttctatatgtatcagttagctattgctgtgtaacaaatcacctcaaagggagcagtttcaaacaacacacgtttattatcttg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55307991 92 + 59248254 TCTCTTTATTTCTATAtgtatcagttagctactgctgtgtaacaaatcacctcaaagggagcagcttcaaacaacacacgtttattatctcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47406291 92 + 51301725 tctctttatttctatatGTATCAGTTAgctactgctgtgtaacaaatcacctCAAAGGGAGCAGCTTCAAACAACACACGTTTATTATCTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47102291 92 + 50890351 TCTCTTTATTTCTATAtatatcagttagctactgctgtgtaacaaatcacctcaaagcgagcagcttcaaacaacacacgtttattatctcg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56207856 4691 + 60714840 I e calJac3.chr22 45632340 4715 + 49145316 I e rheMac3.chr19 60209618 4880 + 64156825 I a score=1873158.000000 s hg38.chr19_GL949747v2_alt 379962 1148 + 729520 cgatttccgtgaatcagggatctgagcacagccc-ggctggg---tcttcagcttcagggtctctccc-gggctgcaatcaaggggccagcagctttgtggccatctcaa-ggttctgttgatttcatggtgttgctggcagttcagttctttgctgactcttggccagaagccacccctcagttccttgccatgAAAGTTTTCTGCAACAGGATAGCTTTGTTTCATCAAAGTATGCAAACTAAGCAGGCAAAAAGAGTCTGCTAACAGaatgcaagtcacacaatcatccttaaaaggacgggattacatgatgctataaataccaggaggtgaggattattggggaccatctgggaggctgcctaccacaCCGCACAAGGCAAACCTTATGAATATGTATGGATTATATAGGTtgctttcaggcttccaccaaaaataggattgccttacagctctaccagcctaggacccaccccagcaggtgtggcttgcttgttttaagggagcagagacagagggttccttatatcccacagccaagcccttacaggcacagcagggcagctgcttaaggtggagagggagtctaaccggttttcttaccatgcttagggcagaaaacataatctctattttgccatgtaagactcaccactgagcagtccctctctttcctctgtattacactgacacttcacataaacctctaaacctcatataacctctaagcagagataggcttcataaa------------------------ggaatttagccagaatgccacattatttttccttgttgcagagagtagcatctatcttatgggaagagtcatagaaaggccctgcagaatttgctgtaagaaaatagtcaGGCCGggccaggcgccgtggctcacgcctgtaatcccagcactttgggaggccgaggcaggtggatcac--gaggtcaggagatcgagaccatcctggccaacatggtgaaaccccatctctactaaaaacacaaaaaattagccgggtgtgttggcggttgcctgtagtctcagctactcaggaggctgaggcaggagaatggcgtgaactcgggaggtggagcttgcagtgagcggagatcacaccactgcgctccagcctgggccacagagcgagactccatctcaaaaaaa s panTro4.chr19 59322377 1146 + 63644993 cgatttccgtgaatcagggatctgagcacagccc-ggccggg---tcttcagcttcagggtctctccc-gggctgcaatcaaggggccagcagctttgtggccatctcaa-ggttctgttgatttcatggtgttgctggcagttcagttctttgctgactcttggccagaagccacccctcagttccttgccatgAAAGTTTTCTGCAACAGGATAG-TTTGTTTCATCAAAGTATGCAAACTAAGCAGGCAAAAAGAGTCTGCTAACAGaatgcaagtcacacaatcatccttaaaaggacgggattacatgacgctataaataccaggaggtgaggattattggggaccatctgggaggctgcctaccacaCCGCACAAGGCAAACCTTATGAATATGTATGGATTATATAGGTtgctttcaggcttccaccaaaaataggattgccttacagctctaccagcctaggacccaccccagcaggtgcggcttccttgttttaagggagcagagacagagggttccttatatcccacagccaagccct-acaggcacagcagggcagctgcttaaggtggagagggagtctaaccggttttcttaccatgcttagggcagaaagcatgatctctattttgccatgtaagactcaccactgagcagtccctctctttcctctgtattacactgacacttcacataaacctctaaacctcatataacctctaagcagagacaggctttataca------------------------ggaattaagccagaatgccacattatttttccttgttgcagagagtagcgtctatcttatgggaagagtcatagaaaggccctgcagaatttgctgtaagaaaatagtcaGGCCAGTccaggcgccgtggctcacgcctgtaatcccagcactttgggaggccgaggcaggtggatcac--gaggtcaggagatcgagaccatcctggccaacatggtgaaaccccatctctactaaaaatacaaaaaattagccgggtgtgttggcggttgcctgtagtctcagctactcaggaggctgaggcaggagaatggcgtgaactcgggaggtggagcttgcagtgagcggagatcgcaccactgcgctccagcctgggccacagagcgagactccatctcaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56212547 1147 + 60714840 cgatttccgtgaatcagggatctgagcacagcccgggccggg---tcttcagcttcagtgtctctcctggggctgcagtcaaggggccagcagctttgtggccgtctcaagggctctgttgatttcatggcattgctgacagttcaattctttgctgactcttggccagaggccacccctcagttccttgccatgaaggttttctgcaacagggtag-cttgtttcatcaaagtatgcaaactaagcaggcaaaaagagtctgctaacagaatgcaagtcacacaatcatccttaaaaggacaggattacatgacgctataaataccaggaggtgaggattattggggaccatctgggaggctgcctatcacaCCGCACAAGGCAAACCTTATGAATATGTATGGattacatacgttgctttcaggcttccaccaaaaataggattgccttacagctctaccagcctaggacccaccccagcaggtgtggtttgcttgttttaagggagcagagacagagggttccttatatcccacggtgaagccct-acaggcacagcagggcagctgcttaaggtggagagggagtctaaccggttttctcatcatgcttagggcagaaagcatcatctctattttgccaagtaagactcaccactgagcagtccctctctttcctctgtattacaccaacacttcacataaacgtctaaacctcatataacctctaagcagagataggcttcataca------------------------ggaatttagccagaatgccacattatttttccttgttgcagagagtagcatctatcttatgggaagagtcatagaaa-gccctgcagagtttgctgtaagaaaatagtcaGGCCGggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggtggatcac--gaggtcaggagatcgagaccatcctggccaacatggtgaaaccccatctctactaaaaatacaaaaaattagccgggcatgttggcggtcg-ctgtagtctcagctaatcaggaggctgaggcaggagaacggcgtgaactcgggaggcggagcttgcagtgagccaagatcgcgccactgtgctccagcctgggccacagagcgagattctatctcaaaaaaa i ponAbe2.chr19 I 4691 C 0 s nomLeu3.chr10 102939884 1136 - 106955855 cgatttccatgaatcagggatctgagcacagccc-ggctggg---tcttcagcctcagggtctctctcagggctgcaatcaaggggccagcagctttctggccatctcaa-ggttctgttgacttcatggccttgttggcagttcagttccttgctga--cttggctagaggccacccctcagttccttgacacgcaggctttctgcaacaggatagctttgtttcatcaaagtatgcaaactaagaaagcaaaaagagtctgctaacagaatgcaagtcacacaatcatccttaaaaggacgggattacatgacgctataaataccaggaggtgaggattattggggaccatctgggaggctgcctaccgcaccacacaatgcaaaccttatgaatatgtatggattatatacattgctttcaggcttccaccagaaataggattgccttacagctctaccagcctaggacccacccctgcaggtgtggcttgcttgttttaagggagcagagacagagggttccttgtatcccacagccaagccct-acaggcacagcagggcagctgcttaaggtggagagggagtctaaccggttttcttaccatgcttagggcagaaagcatgatctctattttgccatgtgagactcaccactgagcagtccctctc--tcctctgtgttacaccgacacttcacataaacctctaaacctcatataacctctaagcagagataggcttcataca------------------------gaaatttagccagaacgccacattatttttccttgttgcagacagtagcatctatctcacgggaagagtcacagaaa-gccctgcagagtttgctgttaaaaaatagtcaGGCCAggccaggcgcggtggctcacgtctgtaatcccagcactttgggaggccgagacgggtggatcac--gaggtcaggagatcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaatttagccgggcatggtggcgggcgcctgtagtctcagctactcaggaggctgaggcaggagaatggtgtgaactcaggaggcggagcttgcagtgagccgagatcgcgccactgcgctccagcctgggccacagagcgagactccaccgc------- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55308083 1071 + 59248254 tgatttccatgagtcagggatctgagcacagccc-ggccgggtcttcttcggcttcaagatctctcccggggctgcaatcaaggggccagcggctttgtggccatctcaa-ggttctgttgacttcatggccttgttggcagttcagttccatgctgactgtcagccagaggctacccctcagttccttgccgtgcaggctttctgcaacagggtag-cttgtttcatcaaagtatgcaaactaagaaggcaaaaagagtctgctagcagaatgcaagtcacacaatcatctttaaaaggacaggattacatgacgctataaataccaggaggtgaggattattggggaccatctgggaggct------cctgccgcaCAAGGCAAACCTTATGAATATGTATGGATTATATATGTtgctttcaggcttccaccaaaaataggattgccttacagctctaccagcctaggacccaccccagcaggtgtggcttgcttgttttaagggagcagagacggagggttccttatatcccacagccaagccct-acaggcacagcagggcagctgctgaaggtggagagggagtccaaccggttttcttaccgtgcttagggcagaaaGCATGATCTCTATTTTGCCATGTAAGACTCACCACTGAGCAGTCCCTCTCTTTCCTCTGTATTACACTGACACTTCACACAATCCTCTAAACCTCATATAACCTCTAAGCAGAGATAGGCTTCATACATATACTTCCAGTATAATTCATACTGGAATTTAGCCAGAATGCCACACTATTTTTCCTTGTTGCAGAGAGTAGCATCTGTCTTATGGGAAGAGTCATAGAAA-GCCCTGCAGAGTTTGCTGTAAGAAAAT----AGGCCGggctaggcgcagtggctcacgcctgtaatcccagcactttgagaggccaaggcgggtggatcac--gaggtcaggagatcgagaccatcctggctaacacggtgaaaccctgtctctactaaaaatacaaaa--------------------------------------------------------------------------------------------aattagctgagatcgggccactgcactccagcctgggcgacagagcgagaatccctctaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47406383 1047 + 51301725 TGATTTCCATGAGTCAGGGATCTGAGCACAGCCC-GGCCGGGTCTTCTTCGGCTTCAAGATCTCTCCCAGGGCTACAATCAAGGGGCCAGCGGCTTTGTGGCCATCTCAA-GGTTCTGTTGACTTCATGGCCTTGTTGGCAGTTCAGTTCCTTGCTGACTGTCGGCCAGAGGCTACCCCTCAGTTCCTTGCCGTGCAGGCTTTCTGCAACAGGGTAG-CTTGTTTCATCAAAGTATGCAAACTAAGAAGGCAAAAAGAGTCTGCTAGCAGAATGCAAGTCACACAATCATCTTTAAAAGGACGGGATGACATGACGCTATAAATACCAGGAGGTGAGGATTATTGGGGACCATCTGGGAGGCT------CCTACCGCACAAGGCAAACCTTATGAATATGTATGGATTATATACATTGCTTTCAGGCTTCCACCAAAAATAGGATTGCCTTACAGCTCTACCAGCCTAGGACCCACCCCGGCAGGTGTGGCTTGCTTGTTTTAAGGGAGCAGAGACAGAGGGTTCCTTATATCCCACACCCAAGCCCT-ACAGGCACAGCAGGGCAGCTGCTGAAGGTGGAGAGGGAGTCTAACCGGTTTTCTTACTGTGCTTAGGGCAGAAAGCATTATCTCTATTTTGCCATGTAAGACTCACCACTGAGCAGTCCCTCTCTTTCCTCTGTATTACACTGACACTTCACACAATCCTCTAAACCTCATATAACCTCTAAGCAGAGATAGGCTTCATACA------------------------GGAATTTAGCCAGAATGCCACACTATTTTTCCTTGATGCAGAGAGTAGCATCTCTCTGATGGGAAGAGTCACAGAAA-GCCCTGCAGAGTTTGCTGTAAGAAAAT----AGgccgggccaggcgcagtggctcacgcctgtaatcccagcgctttgagaggccgaggtgggtggatcac--gaagtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaa--------------------------------------------------------------------------------------------aattagctgagatcgagccactgcactccagcctgggcgacagagtgagaatccctctccaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47102383 1137 + 50890351 cgatttccatgagtcagggatcggagcacaaccc-ggtcgggtcttcttcggcttcaaggtctctcccagggctgcaatcaaggggccagcagctttgtggccatctcaa-ggttctgttgacttcatggccttgttggcagttcagttccttgctgactgtcggccagaggctacccctcagttccttgccgtgcaggctttctgcaacagggtag-cttgtttcatccaagtatgcaaactaagaaggcgaaaagagtctgctagcagaatgcaagtcacacaattatctttaaaaggacgggattacatgacgctataaataccaggaggtgaggattattggggaccatctgggaggct------cctaccgcaCCAGGCAAACCTTATGAATATGTATGGattatatacgttgctttcaggcttccaccaaaaataggattgccttacagctctaccagcctaggacccaccccagcaggtgtggcttgcttgttttaagggagcagagacggagggttccttatatcccacagccaagccct-acaggcgcagcagggcagctgctgaaggtggagagggagtctaaccggttttcttaccgtgcttagggcagaaaGCATGATCTCTATTTTGTCATGTAAGACTCACCGCTGAGCAGTCCCTCTCTTTCCTCTGTATTACA--GACACTTCACACAATCCTCTAAACCTCAcataacctctaagcagagataggcgtcataca------------------------ggaatttagccagaatgccacactatttttccttgttgcagagagtagcatctctcttatgggaagagtcatagaaa-gccctgcagagtttgctgtaagaaaat----aggcCGggctaggcgcagtggctcacgcctgtaatcccagcactttgggaggctgaggcgggcggatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaa-tgagccggg-gtggtggcaggtgcctgtagtcttagctacttgggagactgaggcaggagaatggcttgaacccgggaggtggaggttgcagtgagctgagatcgcgccactgcactccagcctgggcaacagagcgagactgcgtctcgaaaaaa i chlSab2.chr6 C 0 I 7377 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45632340 4715 + 49145316 I e rheMac3.chr19 60209618 4880 + 64156825 I a score=18118.000000 s hg38.chr19_GL949747v2_alt 381110 32 + 729520 caacaaaaaaaaa--------------------aaagaaaaGAAAATGGTCA s panTro4.chr19 59323523 52 + 63644993 caaaaaaaaaaaacaaaaaaaaaaaaaaaaaagaaagaaaagaaaaTGGTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56213694 33 + 60714840 aaaaaaaaagaaa-------------------aagaaaaaaGAAAATGCTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102941020 28 - 106955855 ----aaaaagaaa--------------------aaagaaaagaaaaTGGTCA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55309154 22 + 59248254 ----aaaaaaaaa--------------------aaaaaaaaaaaa------a i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47407430 28 + 51301725 ----agagagaga--------------------gaaagaaagaaaatggtca i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45632340 4715 + 49145316 I e chlSab2.chr6 47103520 7377 + 50890351 I e rheMac3.chr19 60209618 4880 + 64156825 I a score=307983.000000 s hg38.chr19_GL949747v2_alt 381142 208 + 729520 ggccgggcgtggtggctcatgcctataatcccagcactttaggaggctgaggcaggtggatca--tgacgtcaggagttcgagaccagcctggccaacatggtgaaa-ccccgtctctactaaaaata----------------------caaaaaaaaattagccaggcgtggggtcaggcgcctgtaatcccagctacttgggaggctcaggcaggagaatagctaaaacc s panTro4.chr19 59323575 208 + 63644993 ggccgggcgtggtggctcatgcctataatcccagcactttaggaggctgaggcaggtggatca--tgacgtcaggagttcgagaccagcctggccaacatggtgaaa-ccccgtctctactaaaaata----------------------caaaaaaaaattagccaggcgtgggggcaggcgcctgtaatcccagctacttgggaggctcaggcaggagaatagctaaaacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56213727 208 + 60714840 GGATgggcgtggtggctcacacctataatcccagcactttaggaggctgaggcaggtggatca--tgacgtcaggagttcgagaccagcctggccaacatggtgaaa-ccccgtctctactaaaaata----------------------cacaaaaaaattagccaggcgtgggggcaggcgcctgtaatcccagctacttgggaggctgaggcaggagaatagctaaaacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102941048 212 - 106955855 ggccgggcgtggtggctcatgcctataatcccagcactgtaggaggctgaggcaggtggatca--tgatgtcaggagttcgagaccagcctggccaacatggtgaaa-ccccgtctctacttaaaatacacg------------------cacacaaaaattatccaggcgtgggggcaggtgcctgtaatcctagctacttggaaggctgaggcaggagaatcgctaaaacc i nomLeu3.chr10 C 0 M 1018 s macFas5.chr19 55309176 224 + 59248254 aaaaaGATgtggtggctcagg-ctgtaatcccagcactttaggaggctgaggcaggtggatta--tgaggtcaggagttcgagaccggcctggccaacatggtgaaacccccgtctctactaaaaatacaaaaaaaaaaaaaaa------aaaagaaaaattagccaggtgtgggggcaggcacctgtaatcccagctacttgggaggctgaggcaggagaatagcttaaacc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47407458 230 + 51301725 ggctgggcgtggtggctcagg-ctgtaatcccagcactttaggaggctgaggtaggtggatta--tgaggtcaggagatcaagaccgacctggccaacatggtgaaacccccatctctactaaaaataccaaaaaaaaaaaaaagaaaagaaaagaaaaattagccaggtgtgggggcaggcacctgtaatcccagctacttgggaggctgaggcaggagaatagcttaaact i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45637055 201 + 49145316 ggccgggcacagtggctcacgcctgtaatcctggcatttcgggaggccaaggcgggcggattgcctgagaccagcagctcgagaccagcttgggcaacaaggtgaaa-ccctgtgtctactaa---------------------------aatacaaaaattagccaggcatggtggcatgcatctgta----caggtacatggaaggctgaggcaggagaatcgcttgaact i calJac3.chr22 I 4715 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e chlSab2.chr6 47103520 7377 + 50890351 I e rheMac3.chr19 60209618 4880 + 64156825 I a score=89343.000000 s hg38.chr19_GL949747v2_alt 381350 95 + 729520 tgagaggtggagattgcagtgagccgagaccgcaccactgtactccagcctgaacaacagagggagaccccatttcaaaaaaaaaaa----------------------------------------------------------------aaaaaaaa s panTro4.chr19 59323783 94 + 63644993 tgagaggtggagattgcagtgagccgagaccgcaccactgtactccagcctgaacaacagagggagaccccatttcaaaaaaaaaaa----------------------------------------------------------------aaaaaGA- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56213935 95 + 60714840 tgagaggtggagattgcagtgagccgagactgcatcactgcactccagcctgaacaacagagggagaccccacttcaaaaaaaaaaa----------------------------------------------------------------aaaaaaaa i ponAbe2.chr19 C 0 I 1591 s macFas5.chr19 55309400 93 + 59248254 tgagaggtggaagttgcagtgagccaagaccgcaccactgcactccagcctgaaca--agagtgagaccccatttcaaaaaaaagaa----------------------------------------------------------------aaaaagaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47407688 93 + 51301725 tgagaggtggaagttgcagtgagccgagaccgcaccactgcactccagcctgaaca--agagtgagaccccatttcaaaaaaaagaa----------------------------------------------------------------aaaaagaa i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45637256 158 + 49145316 cgggaggcggaggttttggtgagctgagatcatgccacagcattcaagcctgggcatcagagtgagactccatctcacaataaaaaaattacattgtgccccgtaagtattcctaattacaatgtggcaactaaaatgaaaaGCATTTTTTAAAAAGA- i calJac3.chr22 C 0 I 7 e canFam3.chr1 19788021 11529 - 122678785 I e nomLeu3.chr10 102941260 1018 - 106955855 M e chlSab2.chr6 47103520 7377 + 50890351 I e rheMac3.chr19 60209618 4880 + 64156825 I a score=1205.000000 s hg38.chr19_GL949747v2_alt 381445 2 + 729520 gg s panTro4.chr19 59323877 2 + 63644993 gg i panTro4.chr19 C 0 C 0 s macFas5.chr19 55309493 2 + 59248254 ag i macFas5.chr19 C 0 I 3927 s papAnu2.chr19 47407781 2 + 51301725 ag i papAnu2.chr19 C 0 I 3922 s calJac3.chr22 45637421 2 + 49145316 gg i calJac3.chr22 I 7 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56214030 1591 + 60714840 I e nomLeu3.chr10 102941260 1018 - 106955855 M e chlSab2.chr6 47103520 7377 + 50890351 I e rheMac3.chr19 60209618 4880 + 64156825 I a score=1695.000000 s hg38.chr19_GL949747v2_alt 381447 7 + 729520 ccgggtg s panTro4.chr19 59323879 7 + 63644993 ccgggtg i panTro4.chr19 C 0 C 0 s macFas5.chr19 55313422 7 + 59248254 tagggaa i macFas5.chr19 I 3927 C 0 s papAnu2.chr19 47411705 7 + 51301725 TAAGGAA i papAnu2.chr19 I 3922 C 0 s calJac3.chr22 45637423 7 + 49145316 ctgggca i calJac3.chr22 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56214030 1591 + 60714840 I e nomLeu3.chr10 102941260 1018 - 106955855 M e chlSab2.chr6 47103520 7377 + 50890351 I e rheMac3.chr19 60209618 4880 + 64156825 I a score=14055.000000 s hg38.chr19_GL949747v2_alt 381454 18 + 729520 cggtggctcacgc--ctgta s panTro4.chr19 59323886 18 + 63644993 tggtggctcacgc--ctgta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56215621 18 + 60714840 cggtggctcatgc--ctgta i ponAbe2.chr19 I 1591 C 0 s macFas5.chr19 55313429 20 + 59248254 aattggctcacacgactaca i macFas5.chr19 C 0 I 7 s papAnu2.chr19 47411712 20 + 51301725 AATTGGCTCACACGACTACA i papAnu2.chr19 C 0 I 7 s calJac3.chr22 45637430 18 + 49145316 cggtggctcacgc--ctgta i calJac3.chr22 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e nomLeu3.chr10 102941260 1018 - 106955855 M e chlSab2.chr6 47103520 7377 + 50890351 I e rheMac3.chr19 60209618 4880 + 64156825 I a score=8604.000000 s hg38.chr19_GL949747v2_alt 381472 5 + 729520 atcct s panTro4.chr19 59323904 5 + 63644993 atccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56215639 5 + 60714840 acccc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60214498 5 + 64156825 atccc i rheMac3.chr19 I 4880 C 0 s macFas5.chr19 55313456 5 + 59248254 atccc i macFas5.chr19 I 7 C 0 s papAnu2.chr19 47411739 5 + 51301725 atccc i papAnu2.chr19 I 7 C 0 s calJac3.chr22 45637448 5 + 49145316 atccc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e nomLeu3.chr10 102941260 1018 - 106955855 M e chlSab2.chr6 47103520 7377 + 50890351 I a score=1202572.000000 s hg38.chr19_GL949747v2_alt 381477 625 + 729520 agcactttgggaggccaaggcgggcggatcacctgaggtcgggagttcgagaccagcctgaccaacacggagaaaccccgtctctactaaaaaatacaaaatta-gctaggcgtggtggcgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgc-ttgaacccgggaggcagaggctgcagtgagctgaggtcgagccactgcattcca-------gcctgggcgacag-agcaaaactccat-ctc----------aaaaaaaaaaaaaaaaaaaaaa--ggctgggcgcggtgactcacgtctgtaatcctagcacttt-cggaggccgaggttggtggatca--tgaggtcaggagatcaagaccatcctggccaacatgatgcaaacccatctctactaaaaatacaaaaattaactgggtgtggtggcgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaaccagggagtcagaggttgcagtgacgggagatctcaccactgcactccagcctgggcaacacagccagactccatctctttaaaaaaaaaaaa-----GGCCCACAT------TGGGCCGTGTGATGGGGGATCCCACTCTCCACCTCAAAGGATAGAATGG s panTro4.chr19 59323909 631 + 63644993 agcactttgggaggccaaggcgggcggatcacctgaggtcgggagttcgagaccagcctgaccaacacggagaaaccccatctctactaaaaaatacaaaatta-gctaggcgtggtggagcatgcctgtaatcccagctactcgggaggctaaggcaggagaatcgc-ttgaacccgggaggcagaggctgcagtgagctgaggttgtgccactgcattcca-------gcctggtcggcag-agcaaaactccat-ctc----------aaaaaaaaaaaaaaaaaaaaaaa-ggctgggcgtggtgactcccgtctgtaatcccagcacttt-cggaggccgaggttggcagatca--tgaggtcaggagatcaagaccatcctggccaacatgatgcaaccccatctctactaaaaatacaaaaattaactgggtgtggtggcgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaaccagggagtcagagagtgcagtgacgggagatctcaccactgcactccagcctgggcaacacagccagactccatctctttaaaaaaaaaaaaaaaaaGGCCCACAT------GGGGCCGTGTGATGGGGGATCCCACTCTCCACCTCAAAGGATAGAATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56215644 619 + 60714840 agcactttgggagactaaggcgggtggatcac--aaggtcaggagttcgagaccagtctggccaatgtagtgaaaccccgtctctactaaaaatacaaaaatta-cctaggggtagtggcaggcgcctatagtctcagctactcgggaggctgaggcaggagaatcgc-ttgaacccgggaggcagaggctgcagtgagctgaggtcacgccactacactcca-------gcctgggtgacag-agcaaaactccat-ctc----------aaaaaaaaaaaaaa----------ggctgggcatggtggctcatgtctgtaatcccagcacttt-cggaggccgaggttggtggatca--tgaggtcaggagatcaagaccatcctggccaacatgatgcaaccccatctctactaaaaatacaaaaattaactgggtgtggtggtgtgagcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaaccagggagtcagaggttgcagtgacctgagatctcgccactgcactccagcctgggcgacacagccagactccatctctttaaaaaaaaaaaa-aaaaGTCCCACAT------GGGGCCGTGTGATGGGGGATCCCACTCTCCACCTCAAAGGATAGAATGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102942279 618 - 106955855 agcac-ttgggagaccgaggtgggcgaatcac--aaggtcaggagttcgagaccagcctggccaatgtagtgaaaccccatctctactaaaaatacaaaaattaccccaggggtagtggcgggcgcctatagtctcagctactcgaaaggctgaggcaggagaatcgc-ttgaatccgggaggcggaggctgcagtgagctgaggttgcaccactgcattcca-------gcctgggtgacag-agcaaaactccat-ctc----------aaaaaaaaaaaaa-----------ggctgggagtggtggctcatgtctgtaatcccagcacttt-cggaggctgaggttggcggatca--tgaggtcaggagatcaagaccatcctggccaacatgatgcaa-cccatctctactaaaaatacaaaaattaactgggtgtggtggtgtgagcctgtaatcccagctactcgggaggctgaggcaggagaaccacttgaatcagagggtcagaggttgcagtgacccgagatctcgccactgcactccagcctgggcgacacagccagaacctatctctttaaaaaaaaaaaaaaaGAGCCCCACAT------GGGGCCGTGTGATGGGGGATCCCACTCTCCACCTCAAAGGATGGGATGG i nomLeu3.chr10 M 1018 C 0 s rheMac3.chr19 60214503 644 + 64156825 agccctttgggaggccaaggcgggtggatcccctgaggttgggagttcaagaccagcctgactaacatggagacaccccgtttctactaaaaa-tacaaaatta-actgggcctggtggcgcgcgcctgtagtcccagctacttgggaggctgaggcgggagaatctc-ttgagcctgggaggcagaggttgtggcgagttgagattgcgccactgcactccagcctccggcctgggtaacaacagtgaaactccgtcctc---------aaaaaaaaaaaagaaaagaaaaaaCGTTcaggtgtggtggctcacgtctgtaatcccagcacttt-cggtggtcgtggggggcggatca--tgacgtcaagagatcgagaccattctggccaatgggatgaaaccctatctctactaaaaatacaaaaatgaactgggtgtggtggtgtgtccctgtaatcccagctacttgggagtctgaggcaggagaatctattgaaccagggagtcagaggttgcagtgagccgagatcttgccactgcactccagcctgggtgacacagccagattccatctctt---aaaaaaaaaaaaaaaGTCCCACGTGGGGCCGGGGCCGTGTGATGGGGGAACCCAATCTCTACCTCAAAGGATTGGACAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55313461 644 + 59248254 agccctttgggaggccaaggcgggtggatcccctgaggttgggagttcaagaccagcctgactaacatggagacaccccgtttctactaaaaa-tacaaaatta-actgggcctggtggcgcgcgcctgtagtcccagctacttgggaggctgaggcgggagaatcgc-ttgagcctgggaggcagaggttgtggcgagttgagattgcgccactgcactccagcctccggcctgggtaacaacagtgaaactccatcctc----------aaaaaaaaaaagaaaagaaaaaaCGTTcaggtgtggtggctcacgtctgtaatcccagcacttt-cggtggtcgaggtgggcggatca--tgacgtcaagagatcgagaccattctggccaatgggatgaaaccctatctctactaaaaatacaaaaatgaactgggtgtggtggtgtgtccctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaaccagggagtcagaggttgcagtgagccgagatcttgccactgcactccagcctgggtgacacagccagactccatctctt--aaaaaaaaaaaaaaaaGTCCCACGTGGGGCCGGGGCCGTGTGATGGGGGAACCCAATCTCTACCTCAAAGGATTGGACAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47411744 649 + 51301725 agccctttgggaggccaaggcgggtggatgccctgaggttgggagttcaagaccaacct--ctaacatggagacaccccgtttctactaaaaa-tacaaaatta-actgggcctggtggtgcgcgcctgtagtcccagctacttgggaggctgaggcgggagaatcgc-ttgagcctgggaggcagaggttgtggcgagttgagattgcgccactgcactctagcctctggcctgggtaacaacagcgaaactccgtcctcaaaaaaaaaaaaaaaagaaaagaaaagaaaaaacgttCAGATGTggaggctcacgtctgtaatcccagcactttccggtggtcgaggcgggcggatca--tgacgtcaggagatcgagaccattctggccaatatgatgaaaccccatctctactaaaaatacaaaaattaactgggtgtggtggtgtgtccctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaaccagggagtcagaggttgcagtgagccgagatcttgccactgcactccagcctgggtgacacagccagactctatctcttaaaaaaaaaaaaaaaaaactcccacgT------GGGGCCGTGTGATGGGGGAACCCAATCTCTACCTCAAAGGATTGGACAG i papAnu2.chr19 C 0 M 420 s calJac3.chr22 45637453 627 + 49145316 agcactttgggagtccaaggcaggtggatcac--aaggtcaagagtttgagaccagcctggccaacatggtgaaactacatctttactaaaaatacaaaagtta-gctgggtgtggtggtgagtgtctgtagtcccagttactcaggaggctggggcaagagaattgctttgaaagcagaaggtggaggttgcagaaggccaagattgctccattgcactcca-------gcctgggcaacaagagcgaaactattc-ctt----------aggagaaaaaGTCCCACGTCGG--ggctggatgtggtggctcatgcctgtaatctcagcatttt-gtgggactgaggtgagcggatcacctgaggtc-gaagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggcgaggcttcaggcgcctataatcccagctactcaggagactgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccaagatcatgccactgtactccagcctgggcaacagagcgagactctgtctc----aaaaaaaaaaaaaaaaGTCCCACAT------GGGGCCATGTGATGGGGGAACCCACTCTCCGCCTCAAAGGATAGGACAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e chlSab2.chr6 47103520 7377 + 50890351 I a score=504725.000000 s hg38.chr19_GL949747v2_alt 382102 316 + 729520 ATTCCACCTTTCCCTCCACAGAGGAAGGCAGAACCAGACTTCCCACTAAGACTCAGACTGACAGGGACCTCTTTCCAAGTAGCAAAAAGGTTCATACACGGAAAGCGGAAAATGACAAATTATGACTTGCCACGGTGCATAGCAGCCAAGGTGGTTCCCAAAATAAAAC--CTCTTCCCACACACTTTGTGCCAGGTGCCCCACGTCtttttttttttttttttttttttttttGTAATTAAAGGAGATCGACAAATCTG-GGGTGAGAAGGTTGGTAGAGGATGAGTttttccttcaacatcttattataaaaatttt s panTro4.chr19 59324540 301 + 63644993 ATTCCACCTTTCCCTCCACAGAGGAAGGCAGAACCAGACTTCCCACTAAGACTCAGACTGACAGGGACCTCTTTCCAAGTAGCAAAAAGGTTCATACATGGAAAGCGGAAAATGACAAATTATGACTTGCCACGGTGCATAGCAGCCAAGGTGCTTCCCAAAATAAAAC--CTCTTCCCACACACTTTGTGCCAGGTGCCCCACGTCTTTTTTTTTTTT---------------GTAATTTAAGGAGATCGACAAATCTG-GGGTGAGAAGGTTGGTAGAGGCTGAGTttttccttcaacatcttattataaaaaattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56216263 316 + 60714840 AGACCACCGTTCCCTCCACAGAGGAAGGCAGAACCAGACTTCCCACTAAGACTCACACTGACAGGGACCTCTTTCCAAGTAGCAAAAAGGTTCATACACGGAAAGCGGAAAATGACAAATTATGACTTGCCACGGTGCATAGCAGCCAAGGTGGTTCCCAAAATAAAAC--CTCTTCCCACACACTTTGTGCCAGGTGCCCCATGTCtttttttttttt-ttttttttttttttGGAATTTAAGGAGATCGACAAACCTGTGGGTGAGAAGGTTGGTAGATGCTGAGTttttccttcaacatcttattataaaaatttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102942897 305 - 106955855 AGACCACCTTTCCTTCCACAGAGGAAGGCAGAACCAGACTTCCCACTAAGACTCAGACTGACAGGGACCTCTTTCCAAGTAGCAAAAAGGTTCATACACGGAAAGCGGAAAATGACAAATTATGACTTGCCACGGTGCATAGCAGCCAAGGTGATTCCCAAAATAAAAC--CTCTTCCCACACACTTTGTGCCAGGTGCCCCAAGtttttttttttttt--------tttttttGTAATTTAAGGAGATCGACAAACCTG-GGGTGAGAAGGTTGGTAGAGGCTGAATTTTTCCTTCAACATC---TTATAAAAATTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60215147 300 + 64156825 AGAGCACCTTTCCTTCCACAGAGGAAGGCAGAACCAGACTTCCCCCTGAGACTCAGACTGACAGGCACCTCTTTCCAAGTGGCAAAAAGGTTCATACACAGAAAGCGGAAAATGACAAATTATGACTTGCCACCGTGCATAGCAGCCAAGGTGGTTCCCAAAATAAAAC--CTCTTCCCACACACTTTGTGACAGGTGCCCCAAGTC--TTTTTTTTTT--------------TGTAATTTAAGGAGATCGACAAACCTGTGGGTGAGGAGGTTGGTAAAGGCTGAGTTCtt-ctccaacatcttattataaaattttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55314105 302 + 59248254 AGAGCACCTTTCCTTCCACAGAGGAAGGCAGAACCAGACTTCCCCCTGAGACTCAGACTGACAGGCACCTCTTTCCAAGTGGCAAAAAGGTTCATACACAGAAAGCGGAAAATGACAAATTATGACTTGCCACTGTGCATAGCAGCCAAGGTGGTTCCCAAAATAAAAC--CTCTTCCCACACACTTTGTGACAGGTGCCCCAAGTCTTTTTTTTTTTT--------------TGTAATTTAAGGAGATCGACAAACCTGTGGGTGAGGAGGTTGGTAAAGGCTGAGTTCtt-ctccaacatcttattataaaattttt i macFas5.chr19 C 0 C 0 s calJac3.chr22 45638080 303 + 49145316 AGAGCACCTTTTC-TCTACAGAGGAGGGCAGAGCCAGACTTCCCACTAAGACTCAGACTGGCAGGAACCTCTTTTCAAGCAGCAAAAGGGTTCATACATGGAAAGCGGAAAATGACAAATTGTGACTTGCCACCATGCATAGCAGCCTAGGTGGTTCCCAAAATAAAACCTCTCTTCCCACACACTTTTTGCCAGGTGCCCCAAGtttttttttttttt--------------ttaaatttaaGGAGATCGACAAACCTGTAGGTGAGAAGGTTGGTAGAGGCTGAGTTTCT-CTCCAACATCTTATTATAAAAATTTT i calJac3.chr22 C 0 I 5933 e canFam3.chr1 19788021 11529 - 122678785 I e chlSab2.chr6 47103520 7377 + 50890351 I e papAnu2.chr19 47412393 420 + 51301725 M a score=105916.000000 s hg38.chr19_GL949747v2_alt 382418 89 + 729520 tcaagcatagagaagagttgaaagaatcttagaatgaataccccatccacaccacccagacacccagactcaaccattcacaA----------Cttttt--- s panTro4.chr19 59324841 89 + 63644993 tcaagcatagagaagagttgaaagaatcttagaatgaataccccatccacaccacccagacacccagactcaaccattcacaA----------tttttt--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56216579 89 + 60714840 tcaagcatagagaagagttgaaagaatcttagaatgaataccccatccacaccacccagacacccagactcaaccattcacaA----------tttttt--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102943202 99 - 106955855 TCAAGCATAGAGAAGACCTGACAGAATCTGAGAATGAATACCCCATCCACACCACCCAGACACCCAGACTCAATCATTCACAAtttttttttttttttt--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60215447 91 + 64156825 tcaagcatagag-agagttgaaagaatcttagaatgaataccccatccacaccaaccagacacccagattcaaccattcacaA----------ttttttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55314407 94 + 59248254 tcaagcatagag-agagttgaaagaatcttagaatgaataccccatccacaccaaccagaCACCCAGACTCAaccattcacaa-------tttttttttttt i macFas5.chr19 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45638383 5933 + 49145316 I e chlSab2.chr6 47103520 7377 + 50890351 I e papAnu2.chr19 47412393 420 + 51301725 M a score=45617.000000 s hg38.chr19_GL949747v2_alt 382507 25 + 729520 ttctttttcgagacagagtcctgct s panTro4.chr19 59324930 25 + 63644993 ttctttttcgagacagagtcccgct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56216668 25 + 60714840 tttttttttgagacagagtcccgct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102943301 25 - 106955855 tttttttttgagacagagtcccgct i nomLeu3.chr10 C 0 M 100 s rheMac3.chr19 60215538 25 + 64156825 tttttttttgagacagagtcctgct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55314501 25 + 59248254 tttttttttgagacagagtcctgct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47412813 25 + 51301725 tttttttttgagacagagtcctgct i papAnu2.chr19 M 420 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45638383 5933 + 49145316 I e chlSab2.chr6 47103520 7377 + 50890351 I a score=83400.000000 s hg38.chr19_GL949747v2_alt 382532 63 + 729520 ctgtcgcccaggctagagtgcagtggcatgatcttgactcactgcaacctctgcctcccaggt s panTro4.chr19 59324955 63 + 63644993 ctgtcgcccaggctagagtgcagtggcatgatcttgactcactgcaacctctgcctcccgggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56216693 63 + 60714840 ctgtcacccaggctagagtgtagtggcatgatcttgactcactgcaacctctgcctcccgggt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60215563 63 + 64156825 ctgttgcccaggctggagtgcagtggcatgatcttgacttactgcaacctccgcctcccggat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55314526 63 + 59248254 ctgttgcccaggctggagtgcagtggcatgatcttgacttactgcaacctccgcctcccggat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47412838 63 + 51301725 ctgttgcccaggctggagtgcagtggcatgatcttgacttactgcaacctccgcctcccggat i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45638383 5933 + 49145316 I e nomLeu3.chr10 102943326 100 - 106955855 M e chlSab2.chr6 47103520 7377 + 50890351 I a score=749118.000000 s hg38.chr19_GL949747v2_alt 382595 477 + 729520 tcaagcgattctcctgcctcagcctcccacatagctgggattgcaggtgtctgccaccatg-cccagctaaa--tttttttttttatttttagtagaaacggggtttcatgatgttggccaggctagtttcaaactcctgacctcaagtgatctgcccgcctcggcctcccaaagtgctgggattccaggcatgagccaacatgcccagctaatttttgtatttttagtagaaacagggtttcattatgttgaccaggctggtcttgaactcttgacctattgatctgcccgcctcagcctcccaaagtgctgggattttcaggtgtgagccaccacacccggcTGTTGCACACATCTTAAGTACACCATTAACTGTGTGGGttttttt---------gtttgttttatttatttattatttatttatttattgagccagagtctcgctctgtca-ccaggctggagtgcagtggcacgatcttggctca s panTro4.chr19 59325018 471 + 63644993 tgaagcgattctcctgcctcaacctcccacatagctgggattgcaggtgtctgccaccatg-cccagctaaa--ttttttttgt-atttttagtagaaacggggtttcaccatgttggccaggctagtttcgaactcctgacctcaagtgatctgcccgcctcggcttcccaaagtgctgggattacaggcatgaaccaacatacccagctaatttttgtatttttagtagaaacagggtttcattatgttgaccaggctggtcttgaactcttgacctattgatctgcccacctcggcctcccaaagtgctgggattttcaggtgtgagccaccacacccagccGTTGCACACATCTTAAGTACACCATTAACTGTGTGGGttttttt---------gttt-----atttatttattatttatttatttattgagccagagtctcgctctgtca-ccaggctggagtgcagtggcacgatctcggctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56216756 468 + 60714840 tcaagcgattctcctgcctcagcctcccacatagctgggattgcaggtatctgccaccatg-cccagctaaa--attttttttgtatttttagtagaaatggggtttcaccatgttggccaggctagtttcgaactcttgacctcaagtgatctgcctgccttggcctcccaaagtgctgggattacaggcgtgagccaacatgcccagctaatttttgtatttttagtagaaacagggtttcattatgttgaccaggctggtctcgaactcttgacctattgatctgccagtctcggcctcccaaagtgctgggattttcaggtgtgagccaccacacccggccGTAGCACACATCTTAAGTACACCATTAACTGTGGGGtttttttt---------gttt-----gtttattta----ttatttatttattgagctggagtctcgctctgtca-ccaggctggagtgcagtggcatgatctcagctca i ponAbe2.chr19 C 0 M 1459 s nomLeu3.chr10 102943426 460 - 106955855 tcaagcgattttcctgcctcagcctcccacatagctgggattgcaggtgtgtgccactacg-cccagttaaa--ttttttttgt-atttttagtagagacggggtttcaccatgttggccaggctagtttcgaactcctgacctcaagtgatctgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccaacatgcccagctaatttttgtatttttagtagaaacagggtttcgttatgttgaccaggctggtcttgaactcctgacctattgatctgcccgcctcggcctcccaaagtgctgggattttcaggtgtgagccaccacacccagccGTTGCACACATCTTAAGTACCCCATTAACTGTGGG----ttttt---------gttt-----gtttgt-------ttatttatttattgagctggagtctccctccgtca-ccaggctggagtgcagtggcactatctccgctca i nomLeu3.chr10 M 100 I 8 s rheMac3.chr19 60215626 470 + 64156825 tcaagcggttctcctgcctcagcctcccacatagctgggattacaggtgtctgccaccatgaccaggctcaattttttttttgt-atttttggtagagacagtgtttcatcatgttggccaggctactttcgaactcctgacctcaagtgatctgcctgcctcggcctcccaaagcactgggattacaggtgtgagccaacatgcccagctaatttttctatttttagtagagacagggtttcatcatgttgaccaggctggtcttgaat---tgacctactgatctgcctgcttcagcctcccaaagtgctggga-ttacaggtgtgagccaccacacctggccATTGCACACATCTTAAGTACACTATTAACTGTGTGTG-------GGGGGGGGTGAGt-----atttatttat---ttatttatttgttgagatggcgtctcgctctgtcgcccaggctggagtgcagtggcatgatctcggctca i rheMac3.chr19 C 0 I 4 s macFas5.chr19 55314589 466 + 59248254 tcaagcggttctcctgcctcagcctcccacatagctgggattacaggtgtctgccaccatg-cccggctcaa-tttttttttgt-atttttggtagagacagggtttcatcatgttggccaggctactttcgaactcctgacctcaagtgatctgcctgcctcagcctcccaaagcactgggattacaggtgtgagccaacatgcccagctaatttttctatttttagtagagacagggtttcatcatgttgaccaggctggtcttgaat---tgacctactgatctgcctgcttcagcctcccaaagtgctggga-ttacaggtgtgagccaccacacctggccATTGCACACATCTTAAGTACACTATTAACTGTGTGTG-------GGGGGGG--GAGT-----Atttatttat---ttatttatttgttgagatggcgtctcgctctgtcgcccaggctggagtgcagtggcatgatctcggctca i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47412901 475 + 51301725 tcaagcggttctcctgcctcagcctcccacataactgggattacaggtgtctgccaccacg-cccggctcaa--tgttttttgt-atttttggtagagacagggtttcatcatgttgaccaggctactttcgaactcctgacctcaagtgatctgcccgcctcggcctcccgaagcactgggattacaggtgtgagccaatatgcccagctaatttttctatttttagtagagacagggtttcatcatgttgaccaggctggtcttgaattcctgagctattgatctgcccgcctcagcctcccaaagtgctggga-ttacaggtgtgagccaccacacctggccatttcaCACATCTTAAGTACACcattaactgtgtgtgtgtgtgtgggcggg--ggtt-----atttatttat---ttatttatttgttgagatggcgtctcgctctgtcgcccaggctggagtgcaatggtacgatctcagctca i papAnu2.chr19 C 0 I 4 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45638383 5933 + 49145316 I e chlSab2.chr6 47103520 7377 + 50890351 I a score=230074.000000 s hg38.chr19_GL949747v2_alt 383072 205 + 729520 ----agcgattctcgggttcaagcaattctcctgcctcagtctcccaagcagttgggactacaggtgcctgtcaccacgcctggctaa-tttttgtat----------ttttagtagagacagggttccaccatgttggccaaaattgtctcgatctcttgacctc--atgatcctcctgcctcggcctcccaaagtactgggattacaggcgtgagccacc s panTro4.chr19 59325489 205 + 63644993 ----agcgattctcgggttcaagcgattctcctgcctcagtctccggagcagttgggactacaggtgcctgccaccacgcctggctaa-tttttgtat----------ttttagtagagacagggtttcaccatgttggccaagattgtctcgatctcttgacctc--gtgatccgcctgcctcggcctcccaaagtactgggattacaggcgtgagccacc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102943894 217 - 106955855 ----tccgcctcccgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggcatttgccaccacacctggctaa-ttttttttttttttttgtattttagtagagacggggtttcaccatgttggccaggctggtctccaactcctgacctcaggtgatccatccatctcagcctcccaaagtgctgggattacaggcgtgagccacc i nomLeu3.chr10 I 8 I 460 s rheMac3.chr19 60216100 210 + 64156825 aacctctgcctccccggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcactcgccaccacgcctggctacttttttgtat----------ttttagtagagacggcgtttcaccatgttagccaggatggtctcaatctcctgacctc--gtgatatgcccgcctcagcctcccaaagtactggggttacaggcgtgagtcacc i rheMac3.chr19 I 4 C 0 s macFas5.chr19 55315059 210 + 59248254 aacctctgcctccccggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcactcgccaccacgcctggctacttttttgtat----------ttttagtagagacggcgtttcaccatgttagccaggatggtctcaatctcctgacctc--gtgatatgcccgcctcagcctcccaaagtactgggattacaggcgtgagtcacc i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47413380 210 + 51301725 aacctctgcctccccggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcccgactacttttttgtat----------ttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgaccta--ttgatccgcccacctcggcctcccaaagtactgggattacaggcgtgagtcacc i papAnu2.chr19 I 4 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56217224 1459 + 60714840 M e calJac3.chr22 45638383 5933 + 49145316 I e chlSab2.chr6 47103520 7377 + 50890351 I a score=352266.000000 s hg38.chr19_GL949747v2_alt 383277 432 + 729520 gttcccggccTAAGCGTGTTTTAAAATTATATACTGaagcccctatggagacatagaatatggccattgtcacagcaagctcccaaatgcacctgcccagtcacatcttgcctttactcccctggaggctaccactcttctgatattattat--ttttt-cactatagactaatttcaactgttctgggacttcacgcaagcagaatcataaactctcagaaaactgaactctcctctctggcttcttccactcagctcaaagtttctgagattcacccgtgctgctgtgtgtgtccacagtccgttcattttcactgcggggcaggattgcattgtacggggttccgtggtttatttatcctttcttccactgatgaacacctggctgtttccagtcttgggggctcttgtgaacaaagctactgttaacattt s panTro4.chr19 59325694 433 + 63644993 actcccggccTAAGCGTGTTTTAAAATTATATaccgaagcccctatggagacatagaatatggccattgtcacagcaagctcccaaatgcacctgcccagtcacatcctgcctttactcccctggaggccaccactcttctgatattatttt--ttttttcactgtagactaatttagactgttctgggacttcacgcaagcagaatcataaactctcagaaaactgaactctcctctctggcttcttccacgcagctcaatgtttctgagattcacccgtgctgctgcgtatgtgcacagtccgttcattttcactgcggagcaggattgcattgtacggggttccgtggtttatttatcctttcttccgctgatgaacacctggctgtttccagtcttgggggctcttgtgaacaaagctactgttaacattt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60216310 434 + 64156825 gctcctggccTGAGTGTGTTTCAAAATTATATACTGaagctcctatggagacatagaacacgg-cattgtcacagcaagctcccgaatgcacctgcccagtcacatcccgcctttactttcctggaggccaccactcctctgatattattattattttttcactatagtctaatttccactgttccgggacttcacacaagcagagtcataaactctcagaaagctaagctctcctctctggcatcttccactcagctcggtgtctctgagattcctccgtgccgctgtgtgtgtccacagtcccttcgcttttaccgtggcgcaggattgccttgtacggggttccgtcgtttctttatcctttcttctgctgatgaacacctggccgtttccagtcttgggggttcttgtgaacacagctaccattaacattt i rheMac3.chr19 C 0 I 889 s macFas5.chr19 55315269 434 + 59248254 gctcctggccTGAGTGTGTTTCAAAATTATATACTGaagctcctatggagacatagaacacgg-cattgtcacagcaagctcccgaatgcacctgcccagtcacatcccgcctttactttcctggaggccaccactcctctgatattattattattttttcactatagtctaatttccactgttccaggacttcacacaagcagagtcataaactctcagaaagctaagctctcctctctggcgtcttccactcagctcggtgtctctgagattcctccgtgccgctgtgtgtgtccacagtcccttcgcttttaccgcggcgcaggattgccttgtacggggttccgtcgtttctttatcctttcttcttctgatgaacacctggccgtttccagtcttgggggttcttgtgaacacagctaccattaacattt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47413590 433 + 51301725 gctccTGGCCTAAGTGTGTTTCAAAATTATATACTGAAGCTCCTATGGAGACATAGAACACGG-CATTGTCACAGCAAGCTCCCGAATGCACCTGCCCAGTCACATCCCGCCTTTACTTTCCTGGAGGCCACCGTTCctctgatattattattattttttcactataGTCTAATTTCCACTGTTCCGGGACTTCACACAAGCAGAGTCATAAACTCTCAGAAAGCTAAGCTCTCCTCTCTGGCGTCTT-CACTCAGCTCGGTGTCTCTGAGATTCCTCCGTGCCGCTGTGTGTGTCCACAGTCCGTTCGCTTTTACCGTGGCGCAGGATTGCCTTGTACGGGGTTCCGTCGtttctttatcctttcttctgctgatgAACACCTGGCCGTTTCCAGTCTTGGGGGTTCTTGTGAACACAGCtaccattaactttt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56217224 1459 + 60714840 M e calJac3.chr22 45638383 5933 + 49145316 I e nomLeu3.chr10 102944111 460 - 106955855 I e chlSab2.chr6 47103520 7377 + 50890351 I a score=215974.000000 s hg38.chr19_GL949747v2_alt 383709 461 + 729520 ctatttatttatttatttttgagacaaagtcttgctctctcacccaggctggagtgcagtggcgcgatcttggctcactgcaacctccgcctcatggtgcaagcgattct-ctgcctcagcctcccgagtagctgggattacagacatttgccactgcacctggctaatttttttttttttttttttt--------gtattttagtagagac-ggggtttcaccatgttggccaggctggtctccaactcctgacctcaggtgatccacccatctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccAACAAGTCTTTCAATcacacctttcatgtgcaaaccaaacagtccagagcccagcccccagccacctccatttctgagctctcacactcagggctgctgtgcacctgccttcatcacccagggccaggaaccagaccactagagtag s panTro4.chr19 59326127 469 + 63644993 ctatttatttatttatttttgagacaaagtcttgctctctcgcccagggtggagtgcagtggcgcgatcttggctcgctgcaacctccgcctcatggtgcgagcgattct-ctgcctcagcctcccgagtagctgggattacaggcatttgccaccgcacctggctaattttttttttttttttttttttttttttgtattttagtagagac-ggggtttcaccatgttggccaggctggtctccaactcctgacctcaggtgatccacccatctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccAACAAGTCTTTCCATcacacctttcatgtgcaaaccaaccagtccagagcccagcccccagccacctccatttctgagctctcacactcagggctgctgtgcacctgccttcatcacccagggccaggaaccagaccactagagtgg i panTro4.chr19 C 0 C 0 s macFas5.chr19 55315703 442 + 59248254 ttttttttttttttttttttgagac--agtctcgctctctcgcccaggctagagtgcagtggcgtcatcttggctcattgcaacctccgcctcctggtgcaggcgattctcctgcctcagcctcccgagtagctgggattacaggcatttgccactgcacccggctaa--------------tttttt-----------ttttagtagagacaggggtttcaccatgttggccaggctggtctccaactcctgacctcaggtgatccacccatctcagcctcccaaagtgct-cgattataggcttgagccaccg-gccaagccAACAACTCTTTCAATcacacctttcacatgcaaaccaaccagtccagagcccagcccccagccaccttcctttctgagctctcacactcaaggctgctgtgcacctgccttcatcacccagggccagaaaccataccgctagagTAG i macFas5.chr19 C 0 I 45 s papAnu2.chr19 47414023 444 + 51301725 ttttttttttttttttttttgagac--agtctcgttctctcgcccaggctagagtgcagtggcatcatcttgactcactgcaacctctgcctcccggtgcaggcgattctcctgcctcagcctcccgagtagctgggattacaggcatttgccactgcacccggctaa------------tttttttt-----------ttttagtagagacaggggtttcaccatgttggccaggctagtctccaactcctgacctcaggtgatccacccatctcagcctcccaaagtgct-cgattataggcttgagccaccg-gccAAGCCAACAACTCTTTCAATCACACCTTTCACATGCAAACCAACCAGTCCagagcccagcccccagccaccTTCCTTTCTGAGCTCTCACACTCAAGGCTGCTGTGCACCTGCCTTCATCACCCAGGGCCAGGAACCATACCGCTAGAGTAG i papAnu2.chr19 C 0 I 49 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56217224 1459 + 60714840 M e calJac3.chr22 45638383 5933 + 49145316 I e nomLeu3.chr10 102944111 460 - 106955855 I e chlSab2.chr6 47103520 7377 + 50890351 I e rheMac3.chr19 60216744 889 + 64156825 I a score=100520.000000 s hg38.chr19_GL949747v2_alt 384170 1105 + 729520 gcccaatgccccaggccctgctgaaattattcaaattagctaatcacaaacctgtttaccctgccccacccactcattcctgcaaaaaccaaatcaagctcttgccctctctccgccctcactccctctgcctctgatccctcgtgctctcccgtgtgacctgcatgctccctcggccctggtgctctctgggtgtcctgcctggcctggcatgtcccttcctcttgagaactgtgacaaactgtcttctcagtggtccatctcatctgctgggccccccatacctATGTATGAAAACATCTTGAAgccgggcgcggtggcttacgcctgtaatcccagcactttgggaggctgaggcaggtggatcatgaggttagtgtcacgcgagtccgtgtgaagagtccaccaaacaggctttgtgtgagcaacaaggctgtttatttcacctgggtgcaggcgggctgagtccgaaaacagagtcagtaaagggtggtgggattatcattagttcttacaggtttggggacaggcggtggagttaggagcaatgttttgcgggcagggggtggatctcacaaagtacattctcaagggtggggaaaattacaaagaaccttcttaagggtgggagagattacaaagaaccttcttaagggtggggaagattacaaagtacattgatcagtcagggtggggcaggaacaaatcacaatggtggaatatcatcagttaaggctattttcccttcttttgtggatcttcggttgcttcaggccatctggatgtatagatgcaggtcacaggggataggatggcttagcttgggcttagaggcctgacag---ttcaagagcagcctggccaagatggtgaaaccccatttctactaaaaatacaaagaattagccaggtgtggtggcatgcacctatagtcccagctactcaggaggctgaggcaggagaattgcttgaacccgggaggcggaggttgcagtgagccgagatcggaccattgcactccagcctgggcgacagagcgagactctgtctcaaaaaaaaaaaaaaagaaagaaagaaagaaAAGAAAAGAAAAAAGaaatacattggg s panTro4.chr19 59326596 1102 + 63644993 gcccaatgccccaggccctactgaaattattcaaattagctaatcataaacctgtttaccctgccccacccactcattcctgcaaaaaccaaatcaagctcttgccctctctccgccctcactccctctgcctctgatccctcgcgctcccaagtgtggcctgcatgctccctcggccctggtgctctctgggtgtcctgcctggcctggcgtgtcccttcctcttgagaactgtgacaaactgtcttctcagtggtccatctcatctgctgggccccccatacctATGTATGAAAACATCTGGAAgccgggcgcggtggcttacgcctgtaatcccagcactttgggaggctgaggcaggtggatcatgaggttagtgtcacgtgagtccgtgtgaagagtccaccaaacaggctttgtgtgagcaacaaggctgtttatttcacctgggtgcaggcgggctgagtccgaaaacagagtcagtaaagggtggtgggattatcattagttcttacaggtttggggacaggcggtggagttaggagcaatgctttgtgggcagggggtggatctcacaaagtacattctcaagggtggggagaattacaaagaaccttcttaagggtgggagagattacaaagaaccttcttaagggtggggaagattacaaagtacattgatcagttagggtggggcagaaacaaatcacaatggtggaatgtcatcagctaaggctattttcccttcttttgtggatcttcggttgcttcaggccatctggatgtatagatgcaggtcacaggggataggatggcttagcttgggcacagaggCCTGAcaggagttcaagagcagcctggccaagatggtgaaaccccatttctactaaaaatacaaagaattagccaggtgtggtggcatgcaactgtagtcccagctactcaggaggctgaggcaggagaattgcttgaacccaggaggcggaggttgcagtgagccgagatcgcaccattgcactccagcctgggcgacagagcgagactctgtctcaaaaaaaaaaaaa------gaaagaaagaaaagaaaAGAAAAAAGaaatacattggg i panTro4.chr19 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56217224 1459 + 60714840 M e calJac3.chr22 45638383 5933 + 49145316 I e nomLeu3.chr10 102944111 460 - 106955855 I e chlSab2.chr6 47103520 7377 + 50890351 I e papAnu2.chr19 47414467 49 + 51301725 I e macFas5.chr19 55316145 45 + 59248254 I e rheMac3.chr19 60216744 889 + 64156825 I a score=119815.000000 s hg38.chr19_GL949747v2_alt 385275 468 + 729520 tttggaaggccga-ggagggcggatcacaaggtcaggagttcaaaaccagcctgatcaacatggtgaaaccctgtctatactgaaaatacaaaaattagccaggcgtggtagcgcatgcctgcagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtaagccaagatcatgccattgcactccagcctgggctacagagtgatactctgtctc-aaaaaaaaaaaaagaaagaaatacattggcgtggttcagaaaggtggaacaacacaaagggtggggt-gaggcgtgcaatttaaacattttctgattgacaattggttgagttttctctgaagacccggaatcaatagaaaggaaatgttcaggttaagctaaaggatcgtggagaccaggttttattgtgcagaggaagctgacttcagagagagagggcagggt s panTro4.chr19 59327698 468 + 63644993 tttggaaggccga-ggagggcggatcacaagatcaggggttcaaaaccagcctgatcaacatggtgaaaccctgtctatactgaaaatacaaaaattagccaggcatggtagcgcatgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccgagatcatgccattgcactccagcctgggctacagagtgagactctgtctc-aaaaaaaaaaaaagaaagaaatacattggtgtggttcagaaaggtggaacaacacaaagggtggggt-gaggggtgcaatttaaacattttctgattgacaattggttgagttttctctgaagacccggaatcaatagaaaggaaatgttcaggttaagctaaaggattgtggagaccaagttttattgtgcagaggaagctgacttcagagagagagggcagggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56218718 471 + 60714840 tttggaaggccgagggagggtggatcacgaggccaggagttcaaaaccagcctgaccaacatggtgaaaccttgtctttactaaaaatacaaaaattagccgggcgtggtagcacatgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacctgggaggcagaggttgcagtgagccaagatcatgccattgcactccagcccgggcgacagagggagactccgcctcaaaaaaaaaaaaaagaaagaaatacattggtgtagttcagaaaggtggaacaacacaaagggtggggtgggggggtgcaatttaaacattttctgattgacaattggttgaattttatctgaagacccgggatcaatagaaaggaaatgttcaggttaagataaagaattgtggagaccaagttttattgtgcagaggaagctgacttcagagagagagagcaggtt i ponAbe2.chr19 M 1459 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45638383 5933 + 49145316 I e nomLeu3.chr10 102944111 460 - 106955855 I e chlSab2.chr6 47103520 7377 + 50890351 I e papAnu2.chr19 47414467 49 + 51301725 I e macFas5.chr19 55316145 45 + 59248254 I e rheMac3.chr19 60216744 889 + 64156825 I a score=329775.000000 s hg38.chr19_GL949747v2_alt 385743 684 + 729520 gtaaaatgcttcttacaggacctaaaagagtgcctgggccggccacggtggctcacacctgtaatcccagcaactttgggaggtcgaggcaggcggatcacctgaggtcgggagttcaaagccagcctgaccaacatggagaaaccctgtctctactaaaaaatacaaaattagctgggcgtggtggtgcatgcctgtaatctcagctagttgggaggctgaggcaggagaattgcttgaacctgggaggtggaggttgcggtaagccgagattgtgccgttgcactccagcctgggcaaaaagagtgaaactctgtctcaaaaaaaaaaaa---------gagtgcctggc-------------tctcctgggcctggaaaggaagaagggaaaacaaaggagaaacggggttctgtaaa-gaatgtggatttttcccacaagagactttgcagggcaatttcaaaatatggcagagaaacatgttttggggtaaaatatttttattttcttccttgtgttgtaatgctatgccagagtcagattggaaagtaagtcacaccatagaggattaaatacaacccatctgatgagaatttatggttt---------gtaaggcatgactcctcaaacgccttaggtaggaatttgggcaaga---taaaaaaatcagagcttagttctcaGGGGT--CATGGCGGGACAACAGGAGAGAGCG s panTro4.chr19 59328166 694 + 63644993 gtaaaatgcttcttacaggacctaaaagagtgcctgggccggccacggtggctcacacctgtaatcccagcaactttgggaggtcgaggcaggcggatcacctgaggtcgggagttcaaaaccagcctgaccaacatggagaaaccctgtctctactaaaaaatacaaaattagctgggcgtggtggtgcatgcctgtaatctcagctagttgggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgcggtaagccgagattgtgccattgcactccagcctgggcaaaaagactgaaactctgtctcaaaaaaaaaaaaaaaaaaaaagagtgcctggc-------------tctcctgggcctggaaaggaagaagggaaaacaaaggggaaaaggggttccctaaaagaatgtggatttttcccgcaagagactttgcagggcaatttcaaaatatggcagagaaacctgttttggggtaaaatatttttattttcttccttgtgttgtaatgctatgccagagtcagattggaaagtaagtcacaccatagaggattaaatacaacccatctgatgagaatttatggttt---------gtaaggcatgactcctcaaacgccttaggtaggaatttgggcaaga---taaaaaaatcagagcttagttctcaGGGGT--CATGGCGGGACAACAGGAGACAGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56219189 698 + 60714840 gtaaaatgcttcttacaggacctaaaagagtgcctgggccagccacagtggctcacacctgtaatcccagcaactttgggaggtcgaggcaggcggatcacctgaggtcgggagttcaaaaccagcctggccaacttggagaaaccctgtctgtactgaaaaatacaaaattagctgggtgtggcggtgcatgcctgtaatctcagctagtcgggaggttgaggcaggagaattgtttgaacccaggaggtagaggttgcagtgagccgagattgtgccattgcattccagcctgggcaaaaagagtgaaattctgtctcaaaaaaaaaaaa-aaaaaaaagagtgtttggc-------------tctcctgggcctggaaaggaagaagggaaaacaaaggggaaaaggggttctctaaa-gaatgtggatttttcccacaagagatttttcagggcaatttcaaaatatggcagagaaacatgttttggggtaaaatatttttattttcttccttgtgttgtaatgctatgctagagtcagattggaaagtaagtcacactatatagggttaaatacaacccatctgatgagaatttatggttgtagtttctattaagg------gccttaaacgccttaggtaggaatctgggcaagatttttaatagatcagagtttagtcctcaGGGGT--CATGGCGGGACAACAGGAGAGAGCG i ponAbe2.chr19 C 0 I 1192 s chlSab2.chr6 47110897 698 + 50890351 gtaaaatgcttctcccaggacctaaaagagtgcctggaccggccgcagtggctcacaccagtaatcccaacaactttggggggtcgaggcaggcggatcacctgaggttgggagttcaaaaccagcctggtcaacatggagaaaccccgtctctactgaaaaatacaaaattagctgggtgtggtggtgcacacccgtaatcccagctagttgggaggctgaggcaggagaactgcttgaacccaggaggcagaggttgcggtgagccgagattgcgccattgcattccagcctgggccaaaagagtgaaactccgtctcagaaaaaaaaaa------aagaagggcctggctcttagttgattatctcctgggcctggaaaggaaggaaggaaaacaaaggggaaaagaggttatctaaa-gaatgtggatttttcccacaagagactttgcagggctatttcaaaatataac--agaaacttgttttggggtaaaatatttttattttcttccttgtgtggcaatgctatgccagagtcagattggaaagtcagttacagtatatat--tagaatacagcccatctgatgagaatttatggttt---------gtaaggcatgactcctcaaaccccttaggtaggaatctgggcaaga---tagaaaaatcagagcttagtcctcaGGGGTCACACAGCAGGACAACAGGAGAGAGTG i chlSab2.chr6 I 7377 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45638383 5933 + 49145316 I e nomLeu3.chr10 102944111 460 - 106955855 I e papAnu2.chr19 47414467 49 + 51301725 I e macFas5.chr19 55316145 45 + 59248254 I e rheMac3.chr19 60216744 889 + 64156825 I a score=2221.000000 s hg38.chr19_GL949747v2_alt 386427 14 + 729520 TCTCACCCATATTT s panTro4.chr19 59328860 14 + 63644993 TCTCACCCatattt i panTro4.chr19 C 0 C 0 s chlSab2.chr6 47111595 13 + 50890351 TCTCACGCATGTT- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56219887 1192 + 60714840 I e calJac3.chr22 45638383 5933 + 49145316 I e nomLeu3.chr10 102944111 460 - 106955855 I e papAnu2.chr19 47414467 49 + 51301725 I e macFas5.chr19 55316145 45 + 59248254 I e rheMac3.chr19 60216744 889 + 64156825 I a score=10419.000000 s hg38.chr19_GL949747v2_alt 386441 22 + 729520 AAAAAAAAAAAAA---GTGCAATGC s panTro4.chr19 59328874 25 + 63644993 aaaaaaaaaaaaaaaaGTGCAATGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56221079 22 + 60714840 aaaaaaaaaaaaa---GTGCAATGC i ponAbe2.chr19 I 1192 C 0 s chlSab2.chr6 47111608 22 + 50890351 AAAAAAAAAAAAA---GTGCAATGT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45638383 5933 + 49145316 I e nomLeu3.chr10 102944111 460 - 106955855 I e papAnu2.chr19 47414467 49 + 51301725 I e macFas5.chr19 55316145 45 + 59248254 I e rheMac3.chr19 60216744 889 + 64156825 I a score=369704.000000 s hg38.chr19_GL949747v2_alt 386463 529 + 729520 Aggctgggcatggtgcctcacgcctgtaatcccagcactttgggaggccgaggagggtggatcacctcaggtcaggagttcaagatcagcgtggccaacttgacaaaaccccttctctactaaaaatacaaaaattacctgggtgtgatggcatgcacctgtagtcccagctactcgggaggccgaggcaggagaattgcttgaacccaggaggcggaggttgcagtgagctgagatggtgccactgcactccagccagggtgacaagagtgaaaactctgcctcaaaaaaaaaaaaa----------agaaTATTACAGTGAAAACCTAGATAGTTATCACCTGGATTCTAGTCTACTGTT-AATCTTTTCtccttccttccttccttccttccttcctt---ccttccttcTCTCTCTCTTt-ttccttccctttctttctttccttcctttctctctgtttctttcctttctctcccttc----tctttttctctttctttctttctttt------ctctccctctttctttctttcctttcctttccctt s panTro4.chr19 59328899 511 + 63644993 Cggctgggcatggtgcctcacgcctgtaatcccagcactttgggaggccaag-agggtggatcacctcaggtcaggagttcaagatcagcctggccaacttgacaaaaccccgtctctactaaaaatacaaaaattacctggctgtgatggcatgcacctgtagtcccagctactggggaggtcgaggcaggagaattgcttgaacccaggaggcggaggttgcagtgagctgagatggtgccactgcactccagccagggtgacaagagtgaaaactccgcctcaaaaaaaaaaaaa-----------gaaTATTACAGTGAAAACCTAGATAGTTATCACCTGGATTCTAGTCTACTGTT-AATCttttctccttccttccttccttc-----------------------tctctctcttt-ttccttccctttctttctttccttcctttctctctctttctttcctttctctcccttccttctctctttctctttctttctttctttc------ctttctctctttctttctttcctttcctttccctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56221101 548 + 60714840 Cggctgggcatggtgcctcacgcctgtaatcccagcactttgggaggccgaggagggcggatcacctcaggtcaggagttcaggatcagcctggccaacatgacgaaaccctgtctctactaaaaatgcaaaaattacctgggtgtgatggcatgcacctgtagtcccagctactcgggaggccgaggcaagagaattgcttgaacccgggaggcggaggttgcagtgagctgagattgtgccactgcactccagccagggtgac--gagtgaaaactccgtctcaaaaaaaaaaaaa---aaaaaaaagaaTATTACAGTGAAAACCTAGATACTTATCACCTGGATTCTAGTCTACTGTTAAATCTTTTCTCTCtccttccttccttccttccttccttttccctccttccttcctttctttattctttctttctctctctttcctttctttttccttccttccttcctttctttctctttctt-tttctttctctttctttctttctttctttcttccctttctctctctttctttcctttccctttcttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102944571 526 - 106955855 AAgccaggcgcggtggctcacgcctgtaatcccagcactttgggaagccgaggagggtggatcacctcaggtcaggagttcaagatcagcctggccaacatgacgaaaccccgtctctactaaaaatacaaaaattacctgggtgtgatggcacgcacctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacctgggaggcagaggttgcggtgagctgagatcgtgccactgcactccagcaagggtgacaagagtgaaaactccgtctcaaaaaaaaaaaaa-----------gaaTATTACAGTGAAAACCTAGATACTTATCACCTGGATTCTAGTCTACTGTT-AATTTTTTCtccctccttccttccttcctttctttcttt--ctttctttctttctttctttctttctttctttctttctttttctttctttctgtctctctctttc---tctctctctt-----tcctttccttttccttccttccttcc------ctttctttcttcctttctttctttttttttttttt i nomLeu3.chr10 I 460 I 140 s chlSab2.chr6 47111630 497 + 50890351 GAgctgggcatggtgcctcacgcctgtaatcccagcactttgggaggccgaggaggatggatcacctcaggtcaggagttcaagaccagcctggccaatatgacgaaaccccatctctactaaaaatataagaattacttgggtgtgatggcatgcacctgtagtcccagctactcgggaggccgaggcaggagaattgcttgaacccgggaggcagaggttgcagtgaactgagattgtgccactgcactccagccagggtgacaagagtgaaaactctgtcaaaaaaaaaaaaaaaaaaaaaaaaaagaaTATTACAGTGAAAACCTAGATACGTATCACCTGGATTCTAGCCTACTGTT-AATCTTTTCtccttccctccttccttccttccttccttc--cttccttccttccttccttccttccttccttccc----------------------------------tccctccctc-----cctctgtctctctctgtctttcttt-------ctctctctcgctctttctttctctttc-------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45638383 5933 + 49145316 I e papAnu2.chr19 47414467 49 + 51301725 I e macFas5.chr19 55316145 45 + 59248254 I e rheMac3.chr19 60216744 889 + 64156825 I a score=338.000000 s hg38.chr19_GL949747v2_alt 386992 2 + 729520 cc s panTro4.chr19 59329410 2 + 63644993 cc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56221649 2 + 60714840 ct i ponAbe2.chr19 C 0 I 78 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45638383 5933 + 49145316 I e nomLeu3.chr10 102945097 140 - 106955855 I e chlSab2.chr6 47112127 0 + 50890351 C e papAnu2.chr19 47414467 49 + 51301725 I e macFas5.chr19 55316145 45 + 59248254 I e rheMac3.chr19 60216744 889 + 64156825 I a score=-675.000000 s hg38.chr19_GL949747v2_alt 386994 56 + 729520 cttcccttcccttccactcactcactccctccctctctctcttttctttctttctt s panTro4.chr19 59329412 14 + 63644993 cttcccttcccttc------------------------------------------ i panTro4.chr19 C 0 C 0 s chlSab2.chr6 47112127 38 + 50890351 -ttgctctctctctcgctctctctttctctttatttctc----------------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56221651 78 + 60714840 I e calJac3.chr22 45638383 5933 + 49145316 I e nomLeu3.chr10 102945097 140 - 106955855 I e papAnu2.chr19 47414467 49 + 51301725 I e macFas5.chr19 55316145 45 + 59248254 I e rheMac3.chr19 60216744 889 + 64156825 I a score=168789.000000 s hg38.chr19_GL949747v2_alt 387050 429 + 729520 tctttctttctttctctctctttc-----------------tcccttccttccttccttccttc-ctttctttctttctttctttcttt-ctttctttctttctttctttctttc----------------------------tttcagacagggtctcgctatgttgtcccggctacagtgtagtggttattcacaggtgcaatcatacccacagagcagccttgaacttctaggctccagtgatcctcctgcaccagcctcctgagttgctgggagcacagactcatgccactgtaccttgcttaatatttatcttccttTGCCTTATtacttatccctccatccatccgtcttattttcttttgtgattaacttcaaaaagagactgcagacaccactacactttctcccaatactaagcatgcacctcattaacatttttcagtaaaatttttatagagtggagtgcacaaa s panTro4.chr19 59329426 376 + 63644993 -------------ctttccctttc-------------------cctccctccctccctccctcc-ctctctctctttct-------------------------------------------------------------------aagacagggtctggctatgttgtcccggctacagtgtagtggttattcacaggtgcaatcatacccacagagcagccttgaacttctaggctccagtgatcctcctgcaccagcctcctgagttgctgggagcacagactcatgccactgtaccTTGCTTCATATTTATCTTCATTTGCCTTATtacctatccctccatccatccgtcttattttcttttgtgattaacttcaaaaagagactgcagacaccactacactttctcccaatactaagcatgcacctcattaacatttttcagtaaaatttttatagagtggagtgcacaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56221729 475 + 60714840 tctctctttctttcctttcctttccttctctccttccttccttccttctttccttccttccttctctctctctctttctctctttctttcctttctctctctctttctttctttcccttctctttcttccttccttcctttctttgaagacagggtctggctatgctgtcccggctacagtgcagtggttattcacaggtgcaatcatacccacacagcagccttgaacttctaggctccagtgatcctcctgcaccagcctcctgagtcactgggaccacaggctcatgccactgtaccTTGCTTAATATTTGTCTTCATTTGCCTTATTACctatccctccatccatctgtcttattttcttttgggattaacttc-agaagagactgcagacactgctacactttctcccaatactaagcatgcacctcattaacatttttcagtaaaatttgtatacagtggaatgcacaaa i ponAbe2.chr19 I 78 C 0 s chlSab2.chr6 47112165 393 + 50890351 tctctctttgtttctctctctctt---------------------ttgttctctttctttcttt-ctctctctctttct-----------------------------ttctttc-------------------------------gagacaggatctggctatattgtccaggctacagtgcagtggttattcacaggtgcgaccgtaaccacacagcagccttgaacttctgggctccagtgaccctcctgcagcagcctcctgagtctctgggaccacaggctcatgccactgtaccttgcttaatatttgtcttCAGTTGCCTTATtacctatccctccctccatccatcttattttctcttgtgattaacctc-aaaggagactgcagccaccactacactttctcccaataccaagcgtgagtctcattaacatttttcagtaaaatttgtatgcagtggaatgcacgaa i chlSab2.chr6 C 0 I 23 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45638383 5933 + 49145316 I e nomLeu3.chr10 102945097 140 - 106955855 I e papAnu2.chr19 47414467 49 + 51301725 I e macFas5.chr19 55316145 45 + 59248254 I e rheMac3.chr19 60216744 889 + 64156825 I a score=78671.000000 s hg38.chr19_GL949747v2_alt 387479 80 + 729520 tcttttttttttttttt-tgagatggagtttcactctttctcccaggctagagtgcagtggtgtgat---agctcactacaact s panTro4.chr19 59329802 79 + 63644993 tctttttttttttcttt--gagatggagtttcactctttctcccaggctagagtgcagtggtgtgat---agctcactacaact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56222204 84 + 60714840 tctttttttttttttttttgagatggagtttcactttttctcccaggctagagtgcagtggtgtgatctcagctcactacaacg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55316190 83 + 59248254 tttttttttttttttgt-tgagacagactcttgctctgtcgcccaggctggagtgcagtggcgctatctcggcccactgcaagc i macFas5.chr19 I 45 C 0 s papAnu2.chr19 47414516 83 + 51301725 ttttttttttttttttt-tgagacggactcttgctctgttgcccaggctggagtgcagtggcactatctcggctcactgcaagc i papAnu2.chr19 I 49 C 0 s chlSab2.chr6 47112581 83 + 50890351 ttttttttttttttttt-tgaggtggactctcgctctgtcgcccaggctggagtgcagtggcacaatctcggctcactgcaagc i chlSab2.chr6 I 23 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45638383 5933 + 49145316 I e nomLeu3.chr10 102945097 140 - 106955855 I e rheMac3.chr19 60216744 889 + 64156825 I a score=626588.000000 s hg38.chr19_GL949747v2_alt 387559 392 + 729520 tccacct-cctgggttcaagcgattttcctgcctcagcctcccgagtagctgggattacaggcatgcaccaccacagctggctaatttt---tgtatgtttagtagagacggggtttcgtcatgttggccaggctggtctggaactcctgacctcaggcgatccacctgcctcggcctcccaaagtgctgggattacaggtgtgagccgccgcacctggccagaaattcacaaatcttaagtgagcgacaaatgcagacactggtacaaaacgaaccctcatcaagatacagaacgaggccctttatcccaggaagttcccccagcccccttcccagtcaccctgaccctactcacccagaggcaaccactgtttttattatttttgctaccatat s panTro4.chr19 59329881 392 + 63644993 tccacct-cctgggttcaagcgattttcctgcctcagcctcccgagtagctgggattaccggcatgcaccaccacagccggctaatttt---tgtatgtttagcagagacggggtttcgtcatgttggccaggctggtctggaactcctgacctcaggcgatccacctgcctcggcctcccaaagtgctgggattacaggtgtgagccgctgtgcctggcctgaaatgcacaaatcttacgtgagcaacaaatgcagacactggtacaaaacgaaccctcatcaagatacagaacgaggccctttatcccagaaagttcccccagcccccttcccagtcaccctgaccctactcacccagaggcaaccactgttcttattatttttgctaccatat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56222288 392 + 60714840 tccacct-cctgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggcatgcggcaccacagctggctaatttt---tgtatgtttagtagagacggggtttcgccatgttggccaggctggtctggaactcctgacctcaggcgatccacctgcctcggcctctcaaagtgctgggattacaggtgtgagccaccgcgcccggccagaaatgcacaaatcgtaagtgagcgacaaatgcagacactggtacaaaacgaaccctcatcaagatacagaacgaggccctttatcccaggaatttcccccagcccccttcccagtcaccctgaccctacttacccagaggcaaccactgttttgattatttttgctaccatat i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60217633 393 + 64156825 tccgcct-cccgggttcccgccattctcctggttcagcctcccgagtagctgggactacaggcgcccgcaaccttgcctggctaattttttgtatttttttagtagagatggggtttcaccgtgttagccaggatgctgtggatctcctgacctc--gtgatccgcctgcctcgggctcccaaagtgctgggattacaggcttgagccaccgtgcctggcctgaaatgcacaaatcttaagtgagcaacacatgcagacactggtacaaaacaaaccctcatcaatatacggaatgatttcctttgttccagaaagttcccccagcccccttcccagtcaccctgaccctgctcacccagaggcaaccactgttctgattgtttttgctaccacat i rheMac3.chr19 I 889 C 0 s macFas5.chr19 55316273 393 + 59248254 tccgcct-cccgggttcccgccattctcctggttcagcctcccgagtagctgggactacaggcgcccgcaaccttgcctggctaattttttgtatttttttagtagagatggggtttcaccgtgttagccaggatgctgtggatctcctgacctc--gtgatccgcctgcctcgggctcccaaagtgctgggattacaggcttgagccaccgtgcctggcctgaaatgcacaaatcttaagtgagcaacacatgcagacactggtacaaaacaaaccctcatcaatatacggaatgatttcctttgttccagaaagttcccccagcccccttcccagtcaccctgaccctgctcacccaaaggcaaccactgttctgattgtttttgctaccacat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47414599 381 + 51301725 tccgcctccccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcgccc------------ggctaattttttgtatttttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctc--gtgatccgcccgtctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgccctgcctgaaatgcacaaatcttaagtgaGTGACACATGCAGACACTGGTCCAAAAC-AACCCTCATCAAGATACGGAATGATTTCCTTTGTTCCAGAAAGTTCCCCCAGCCCCCTTCCCAGTCACCCTGACCCTACTCAcccagaggcaaccactgttCTGATTGTTTTTGCTACCATAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47112664 391 + 50890351 tccgcct-cccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcg-ccgccaccacgcccggctaattgttt-tgtatatttagtagagacagggtttcaccgtgttagccaggatggtctcgatctcctgacctc--gtaatccgcccgtctcggcctcccaaagtgctgggattacaagcttgagccaccgcgcctggcctgaaatgcacaaatcttaagtgagcgacacatgcagacactggtccaaaacgaaccctcatcaagatacggaacgatttccttcgttccagaaagttcccccagcccccttcccagtcaccctgaccctactcacccagaggcaagcactgttctgattatttttgctaccacat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45638383 5933 + 49145316 I e nomLeu3.chr10 102945097 140 - 106955855 I a score=1334929.000000 s hg38.chr19_GL949747v2_alt 387951 610 + 729520 gttaattctgtctgtttggaaaatcatctaactgaactcatacagtgcatcctcctttgtttctgacactcagcacaataattttgagaccgacccatattgctgcatgcattattagcttgtgccttttcattgctaagtagtattccattctgtggctatattacctatcttggtccattcccctgttgataggcatacaggatgtttctagcctgaggctattatgaataaagctgctgtaaacagtcttgcaaaattcttggtgtggataaatattttcttttcttttgggtaaaagtagaattgttggccgggcgtggtggctcacgcctgtaatcccagcagtttgggaggccgaggtgggcagatcacgtgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcatggtggtgtacacctgtagtcccagctactcgggaggctgaggcagaataatcacttaaacctgggaggcagaggttgcagtgagctgagatcatgccattgcactccagctt-ggtgacacagtgagactccgtctaaaaaaca-----aacaaac-------aaaa s panTro4.chr19 59330273 610 + 63644993 gttaattctgtgtgtttggaaaatcatctaactgaactcatacagtgcatcctcctttgtgtctgacactcagcacaataattttgagacctacccatattgctgcatgcattattagcttgtgccttttcattgctaagtagtattccattctgtggctatattacctatcttggtccattcccctgttgataggcatacaggatgtttctagcctgaggctattaggaataaagctgctgtaaacagtcttgcacaattcttggtgtggataaatattttcctttcttttgggtaaaagtagaattgttggccgggcatggtggctcacgcgtgtaatcccagcactttgggaggccgaggtgggcagatcacatgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccaggcatggtggtgtacacctgtagtcccagctacttgggaggctgaggcagaataatcacttaaacctgggaggcagaggttgcagtgagccgagatcatgccattgcactccagctt-ggtgacacagtgagactccatctaaaaaaca-----aacaaac-------aaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56222680 607 + 60714840 gttaatcctgtctgtttggaaaatcatctaactgaactcatacagtacatcctcctttgtggctgacactcagcacaataattttgagaccgacccatattgccgcatgcattattagcttgtgccttttcattgctaagtagtattccgttctatggctatatggcctatcttgggccattcgcctgttgataggcatacaggatgtttctagcctgcggctattgtgaataaagctgctgtaaac----------aattcttggtgtggatacatattttcctttcttttgggtaaaagtagaattgttggccgggcgtggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcagatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctccaccaaaaatacaaaaattagccgggcatggtggtgtacacctgtagtcccagctactcgggaggctgaggcagaagaatcacttaaacccgggaggcggaggttgcggtgagccgaggtcacaccattgcaccccagctt-ggtgacacagtgagactccatctaaaaaaca-----aacaaacaaacaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102945237 600 - 106955855 Gttaattctgtctgtctggaaaatcatctaactgaactcatacagtacgtcctcctttgtgtctgacactcaacacaataattttgagacctacccatactgctgcatgcattattagcttgtgcctttttattgctaagtagtattccattctgtggctatattacatatcttggtccattcccctgttgataggcatacaggctgtttctagcctgaggctattatgaataaagctgctgtaaacaatcttgcacaattcttggtgtggataaatattttcctttcttttgggtaaaagtagaattgttggccgggcatggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaagatacaaaaattagctgggcatggtggtgcacacctgtagtcccagctactcaggaggctgaggcagaagaatcacttaaacctgggaggcggagcttgcagtgagccgagattgcgccattgcactccagtct-ggcaacagagcgagactctgccttaaaa----------------------aaaa i nomLeu3.chr10 I 140 C 0 s rheMac3.chr19 60218026 613 + 64156825 gctaattctgtctgtttggaaaatcatctaactgaactcatacagtacgtccttctttgtgtctgacactcagcacaataattttgagacctacccgtattg-tgcatgcattattagcttgtgtctttccattgctaagtggcattccgttctgtggctatatgacatatcttggtccattcacctgttgacaggcatgcaggctgtttccagcctgaggctattatgaataaagctgctgtaaacagtcttgcacaattcttagtgtggatacatattttcctttcttttgggtaaaagtagaattgttgaccgggtgcagtagctcacgcctgtaatcccagcactttgggaggccaaggcgggcagatca--tgaggtcaggagttcgagaccagcgtggccaacgtggtgaaaccctgtatctactaaaaaaagaaaaattagccgggcgtggtggtgcatgcctgtagtcccagctactcgggaggctgaggcagaagaatcacgtaaatccgggaggcagaggttgcagcgagccaagatcgcaccactgcactccagcctgggtgacagagtgagactccgtctaaaaacaaaaagcaaaaaac-------aaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55316666 613 + 59248254 gctaattctgtctgtttggaaaatcatctaactgaactcatacagtacgtccttctttgtgtctgacactcagcacaataattttgagacctacccgtattg-tacatgcattattagcttgtgtctttccattgctaagtggcattccgttctgtggctatatgacatatcttggtccattcacctgttgacaggcatgcaggctgtttccagcctgaggctattatgaataaagctgctgtaaacagtcttgcacaattcttagtgtggatacatattttcctttcttttgggtaaaagtagaattgttgaccgggtgcagtagctcacgcctgtaatcccagcactttgggaggccaaggcgggcagatca--tgaggtcaggagtttgagaccagcgtggccaacgtggtgaaaccctgtatctactaaaaatagaaaaattagctgggcgtggtggtgcatgcctgtagtcccagctactcgggaggctgaggcagaagaatcacttaaatccgggaggcagagtttgcagcgagccaagatcgcaccactgcactccagcctgggtgacagagtgagactccgtctaaaaacaaaaagcaaaaaac-------aaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47414980 587 + 51301725 GCTGATTATGTCTGTTTGGAAAATCATCTAACTGAACTCATAGAGTACGTCCTTCTTTGTGTCCGACACTCAGCACAATAATTTTGAGACCTACCCGTATTG-TGCATGCATGATTAGCTTGTGCCTTTCCATTGCTAAGTGGTATTCCATTCTGTGGCTATATGACATATCTtgatccattcacctgttgacaGGCATGCAGGCTGTTTCCAGCCtgaggctattatgaataaagctgctgtaaacagtCTTGCACAATTCTTAGTATGGatacatattttcctttctttggggtaaaAGTAGAATTGTTgaccgggtgcagtagctcacgcctgtaatcccagcactttgggaggccaaggcgggcagatca--tgaggtcaggagttcgagaccagcgtggccaacgtggtgaaaccctgtatctactaaaaatagaaaaattagccgggcgtggtggtgcacgcctgtagtcccagctact--------------------------taaatccgggaggcagaggttgcagtgagccaatattgcaccactgcactccagcctgggtgacagagtgagactccgtctaaaaacaaaaagcaaaaacc-------aaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47113055 610 + 50890351 gctaattctgtctgtttggaaagtcatctaactgaactcatacagtacgtcctcctttgtgtctgacactcagcccgataattttgagacctacccgtattg-tgcatgccttattagcttgtgcctttccattgctaagtggtattccattctgtggctatatgacatatcttggtccattcgcctgttgacaggcgtgcaggctgtttccagcctgaggctatgatgaataaagctgctgtaaacagtcttgtacaattcttagtgtggatacatattttcctttctttggggcaaaagtagaattgttaaccgggcacggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcagatca--tgaggtcaggagttcgagaccagcgtggccaacgtggggaaaccctgtctctactaaaaatagaaaaattagccgggtgtggtggtgcacgcctgtagtcccagctactcgggaggctgaggc---agaatcacttaaatctgggaggcagaggttgcagtgagccaacatcgcaccactgcactccagcctcagtgacagagagagactccatctaaaaacaaaaagcaaaaaac-------aaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45638383 5933 + 49145316 I a score=1824253.000000 s hg38.chr19_GL949747v2_alt 388561 623 + 729520 aagagtagaattgttgggtcatgggataggtgtgggcttagatttgtaagaagctgccaggccttttcctacagggtttgtaccctttactctctcatcaataatggat-aacactcgggtgcttcattcctggaatctttggATCTCAGGCCTGCTTTGGGCTGT--TGGTATTTCACTGTGGTTGAATGCAGCTCtattagtcagatttgtccaaagaaagaaaaccaaagagatatataaagagataccagcagaggtttattatgagaacttttcttacacaattctggaggctgaggagtcccacgacgtgctgtccataagctgaagaagcaggaaagctggtggtgtcattcagtctgaggctaaaggcatgaggaccaggaagtttgatgtcctagggcaagagaaaatggatgcgccagttaagaaaacacagtgaattcgcccttcctctgctttttgttctattcgagcctccagcagattggatgaggcccgcccacattggtgagggagaacttctttactcagtctactgattcaaatgctcacctcttccagaaacacccccacagacacatccagaaataatgtcttaccagctatctgggcatccctta s panTro4.chr19 59330883 623 + 63644993 aagagtagaattgttgggtcatgggataggtgtgggcttagatttgtaagaagctgccaggccttttcctacagggtttgtaccctttactctctcatcaataatgtat-aacacttgggtacttcattcctggaatctttggATCTCAGGCCTGCTTTGGGCTGT--TGGTATTTCACTGTGGTTGAATGCAGCTCtattagtcagatttgtccaaagaaagaaaaccaaagagatatataaagagataccagcagaggtttattatgagaacttttcttacacaattctggaggctgaggagtcccacgacatgctgtccataagctgaagaagcaggaaagctggtggtgtcattcggtctgaggctaaaggcatgaggaccaggaagtttgatgtcctagggcaagagaaaatggatgtgctggttaggaaaacacagtgaattcgcccttcctctgctttttgttctattcgagcctccagcagattggatgaggcccgcccacattggtgagggagaacttctttactcagtctactgattcaaatgctcacctcttccagaaacacccccacagacacatccagaaataatgtcttaccagctatctgggcatccctta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56223287 615 + 60714840 aacagtagaattgttgggtcatgggataggtgtgggcttagatttgcaagaa-ctgtcaggccttttcctacagggtttgtaccctttactctctcatc------gtat-aacatttgggtgcttcattcctggaatctttggATCTCAGGCCTGCTTTGGGCTGT--TGGTATTTCACTGTGGTTGAATGCAGCTCtatt-gtcagatttgtccaaagaaagaaaaccaaagagatatatagagagataccagtggaggtttattatgagaacttttcttacacaattctggaggctgagaagtcccacgacatgctgtctataagctgaagaaccaggaaagctggtggtgtcattcggtctgaggctaaaggcatgaggatcaggaagtttggtgtcctagggcaagagaaaatggatgtgccagttaagaaaacacagtgaattcgcccttcctctgctttttgttctattgaagcctccagcagatcggatgatgcccgcccacattggtgacggagaagttctttactcagtctactgattcttatgctcacctcttccaaaactccccccatagacacatccagaaataatgtcttaccagctatctgggcatccctta i ponAbe2.chr19 C 0 I 500 s nomLeu3.chr10 102945837 622 - 106955855 aagagtagaattgttgggtcatgggataggtgtgggcttagatttgtaagaaactgccaggccttttcctacagggtttgtaccctttactctctcatcaataatgtat-aacactc-ggtgcttcattcctggaatctttggATCTCAGGCCTGCTTTGGGCTGT--TGGTATTTCACTGTGGTTGAATGCAGCTCtattagtcaggtttgtccaaagaaagaaaaccaaagagatatatagagagataccagcagagatgtattataaggacttttcttacacagttctggaggctgagaattcccacgacatgctgtctatacgccgaagaaccaggaaagctggtggtgtcattcggtctgaggctaaaggcatgaggaccaggaagtttgatgtcctagggcaagagaaaatggatgtgccagttaagaaaacacagtgaattcgcccttcctctgctttttgttctattcaagcctccagcagattggatgatgcccgcccacatcagtgaggcagaacttctttactgagtctgctgattcaaatgctcacctcttccagaaacacccccacagacacatccagaaataatgtcttaccagctatctgggcatccctta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60218639 623 + 64156825 aagagtagaattgttgggtcatgggataggtgtgggcttagctttgtaagaagctgccaggccttttcctaaagggtttgtaccctttactctctcatcaataatgtat-aacagtcgggtgctttattcctGGAATCTGTGGATCTCAGGCCTGCTTTGGGCTGT--CGGTATTTCACTGCGGTTGAATGCAGCTCtattagtcagatttgtccaacgaaagaaaaccaaagagctatagagagagataccagtggaggtttattatgagaacttttcttacacaattctggagcctgagaagtcccacgacatgctgtctataagctgaagaaccaggaaagctggtggtatcattcggtctgaggctagaggcatgaggaccacgaaatttgttgtcctagggcaagagaaaatggatgtgccagttaagaaaacacagtgaattcgcccttcctctgctttttgttctattcaagcctccagcagattggatgatgcccgcccacattggtgagggagaacttctttactcagtctactgattcaaatgctcacctcttccagaaacacccccacagacacatccagaaataatgtcttaccagctatctgggcatccctta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55317279 623 + 59248254 aagagtagaattgttgggtcatgggataggtgtgggcttagctttgtaagaagctgccaggccttttcctaaagggtttgtaccctttactctctcatcaataatgtat-aacagtcgggtgctttattcctGGAATCTGTGGATCTCAGGCCTGCTTTGGGCTGT--CGGTATTTCACTGCGGTTGAATGCAGCTCtattagtcagatttgtccaacgaaagaaaaccaaagagctatagagagagataccagtggaggtttattatgagaacttttcttacacaattctggagcctgagaagtcccacgacatgctgtctataagctgaagaaccaggaaagctggtggtatcattcggtctgaggctaaaggcatgaggaccacgaaatttgttgtcctagggcaagagaaaatggatgtgccagttaagaaaacacagtgaattcgcccttcctctgctttttgttctattcaagcctccagcagattggatgatgcccgcccacattggtgagggagaacttctttactcagtctactgattcaaatgctcacctcttccagaaacacccccacagacacatccagaaataatgtcttaccagctatctgggcatccctta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47415567 623 + 51301725 aagagtagaattgttgggtcatgGGATAGGTGTGGGCTTAGCTTTGTAAGAAGCTGCCAGGCCTTTTCCTAAAGGGTTTGTACCCTTTACTCTCTCATCAATAATGTAT-AACAGTTGGGTGCTTTATTCCTGGAATCTGTGGATCTCAGGCCTGCTTTGGGCTGT--CGGTATTTCACTGCAGTTGAATGCAGCTCTATTAGTCAGATTTGTCCAACGAAAGAAAACCAAAGAGCTATAGAGAGAGATACCAGTGGAGGTTTATTATGAGAACTTTTCTtacacaattctggaggctgagaagtcccacgaCCTGCTGTCTATAAGCtgaagaaccaggaaagctggtggtatcATTCGGTCTGAGGCTAAAGGCATGAGGACCACGAAATTTGTTGTCCTAGGGCAAGAGAAAATGGACGTGCCAGTTAAGAAAACACAGTGAATTCGCCCTTCCtctgctttttgttctattcaagccTCCAGCAGATTGGATGATGCCCGCCCACATTGGTGAGGGAGaacttctttactcagtctactgattcaaatgctcacctcttccagaaacacccccacagacacatccagaaataatgtcttaccagctatctgggcatccctta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47113665 623 + 50890351 aagagtagaatggttgggtcatgggttaggtgtgggtttagctttgtaagaagctgccaggccttttcctaaagggtttgtaccctttactctctcatcaataatgtat-aacactcgggtgctttattcctGGAATCTGTGGATCTCAGGCCTGCTTTGGGCTGT--CGGTATTTCACTGCGGTTGAATGCAGCTCtattagtcagatttttccaatgaaagaaaaccaaagagctatagagagacataccagcggaggtttattatgagaacttttcttacacaattctggaggctgagaagtcccacgacatgccgtctataagctgaagaaccaggaaagctggtggtatcattcggtctgaggctaaaggcatgaggaccacgaaatttgttgtcctagggcaagagaaaatggatgtgccagttaagaaaacacagtgaattcgcccttcctctgctttttgttctattcaagcctccagcagattggatgatacccgcccacattggtgagggagaacttctttactcagtctactgattcaaatgctcacctcttccagaaacacccccacagacacatccagaaataatgtcttaccagctatctgggcatccctta i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45644316 600 + 49145316 aagggtggaattgttgggtcacggggtaggtgtgggcatagatttgttaggagctgccaggcc---tcctacagggtttgtgcccgctgcaccctcaccaataatgtgcaaacacccaggtgcttcgttcctgggaacttggGGTCTCAGGCCTGCTTTGGGCTGTGCCGGTGTTTCACTGCGGTTGAATGCAGAtgtattagcc----ttgttcgaagaaagagaaccagagggatgcatggagagacaccagcggagatttactgtgagatcttcccttacacagtgagggaggctgagaagtcccaggatgtgctgtctataagccgaagaaccaggaaagctgctggtgtcactgggtctgaggctacaggcatggggaccaggaattttgctgtcctagggcaggagaagctgtatgtgccctttcaagaaa-acagtgacatcgcccttcctctgttttttgtcctgttcgggccttcagcagattggatggtg-acgcccacgttgctgagggaggactgctttacccagtct-----------------cctcttccagaaacacccccacagacgcgtccagaaataatgtcttaccagctatctgggtatccctta i calJac3.chr22 I 5933 C 0 e canFam3.chr1 19788021 11529 - 122678785 I a score=13748.000000 s hg38.chr19_GL949747v2_alt 389184 5 + 729520 ggcca s panTro4.chr19 59331506 5 + 63644993 ggcca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102946459 5 - 106955855 ggcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60219262 5 + 64156825 ggcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55317902 5 + 59248254 ggcca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47416190 5 + 51301725 ggcCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47114288 5 + 50890351 ggcca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45644916 5 + 49145316 ggcca i calJac3.chr22 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e ponAbe2.chr19 56223902 500 + 60714840 I a score=1136090.000000 s hg38.chr19_GL949747v2_alt 389189 438 + 729520 gtcaagttgacgcataaagttaaccatgac-aTCAGCTTatttaataaactggctatatctgcatatttgctcatttgcctaatgagttatctctatcatgctctgtgaaagcagagattttcatccc-tttagttcactgctgaattcccaggg--cctagaacaatgcctggcacctagtagctgt-ccaataaataaatacttggggaatgaacaaaCCAATGAATGTATGGATTCTTCTTTATTATTAATAGATCCCAGGGCTTACTTAACACAGCCTGGCAGCTAT-----------TAAA-CATGTAATCGAaag-aaaggaggggaaaaggaaggaagaaggaaggtagcaatgaaggaa-gaaggaaggagggaagaaagg-----------------------------------aagggagagagagagg----aaggaaagaagg--------aagaaagggagggaggaagga-------------------ggg--gagggagggaggaa--------ag-------- s panTro4.chr19 59331511 438 + 63644993 gtcaagttgacgcataaaattaaccatgac-aTCAGCTTatttaataaactggctatatctgcatatttgctcatttgcctaatgagttatctctatcatgctcggtgaaagcagagattttcactcc-tttagttcactgctgaattcccaggg--cctagaacaatgcctggcacctagtagctgt-ccaataaacaaatacttggggaatgaacaaaCCAATGAATGTACGGATTCTTTTTTATTATTAATAGATCCCAGGGCTTACTTAACACAGCCTGGCAGCTAT-----------TAAA-CATGTAATCGAAAG-AAAGGAGGGGAAAAGTaaggaagaaggaaggtagcaatgaaggaaagaaggaaggagggaagaaagg-----------------------------------aagggagagagagagg----aaggaaagaagg--------aagaaagggagggaggaagga-------------------ggg--gagggaggaaggaa---------g-------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56224402 472 + 60714840 GTCAAGTTGACGCttagatttacccatgacgatcagcttagtttataaactgcctatacctgcatatttgctcatttgcctaatgagttatctctatcatgctctgtgaaagcgggagatttcatttcgtttagttcactgttgaattccccagggccctagaacatgccctggcacctagtagctgtcccaataaataaatacttgcggaatgaacaaaCCAATGAATGTACGGATTGTTTTTTATTATGAATAGATCCCAGGGCTTACTTAACACAGCCTGGCAGCTAT-----------TAAACCATTTAATCGAAAGAAAAGGAGGGGAGAAAgaaggaagaaggaaggtagcattgaaggaaagaaggaaggagggaag-aagg-----------------------------------aggggagggagggagga---aaggaaagaaggaaagtaaaaaggaagagagggaggaaggaggaaggaaggaaggaagtgggg--gagggagggaggga---------g-------- i ponAbe2.chr19 I 500 C 0 s nomLeu3.chr10 102946464 449 - 106955855 gtcaagttgacgcataaaattaaccatgac-aTCAGCTTatttaataaactggctatatctgcatatttgctcatttgcctaatgagttatctctatcatgctctgtgaaagcag--attctcattcg-tttagttcactgctgaattcccaggg--cctagaacagtgcctggaacctagcagctgt-ccaataaataaatgcttggggaatgaaGAAACCAACGAATGTACGGATTCTTTTTTATTATTAATAGATCCCAGGGCTTACTTAACACAGCCTGGCAGCTAT-----------TAAA-CATTTGATCGAaag-aaaggaggggagaaggaaggaagaaggaaggtagcaatgaaggaaagaaggaaggagggaagaaagg-----------------------------------aagggagagagagaggaaggaaggaaagaagg--------aaggaagggagggaggaagga-------------------ggg--aagggagggagggagggaaggtag-------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60219267 433 + 64156825 gtcaagttgatgcataaaattaaccatgac-aTCAGCTTatttaataaactggctatatctgcatatttgctcatttgcctaatgagttatctctatcacgctctgtgaaagcagagattttcattcg-tttagttcactgctgaattcccaggg--cctagaacagtgcctggcacctagttgctgt-ccagtaaatacatacttggggaatgaacaaaCCAATGAATCTACGGATTCTTTTTTATTATTAATAGATCCCAGGGCTTACTGAACACAGTCTGGCAGCTAT-----------TAAA-CATTTAATTGAaag-aaaagaggggagaaggaaggaagaaggaaggtaggaatgaaggaaagaaggaaggagggaagaaagg----------------------------------------agaaagggagg----gagggacgaagg--------aaggaagggaggaaaaagaga-------------------aga--gaaggagggaagga---------a-------- i rheMac3.chr19 C 0 I 167 s macFas5.chr19 55317907 473 + 59248254 gtcaagttgacgcataaaattaaccatgac-atcagcttatttaataaactggctatatctgcatatttgctcatttgcctaatgagttatctctatcacgctctgtgaaagcagagattttcattcg-tttagttcactgctgaattcccaggg--cctagaacagtgcctggcacctagttgctgt-ccagtaaatacatacttggggaatgaacaaaCCAATGAATCTACGGATTCTTTTTTATTATTAATAGATCCCAGGGCTTACTGAACACAGTCTGGCAGCTAT-----------TAAA-CATTTAATTGAaag-aaaagaggggagaaggaaggaagaaggaaggtaggaatgaaggaaagaaggaaggagggaagaaaggaagggagagaggaaggaaggaaggagaaaggaagggaggaaggaaaggagg----aaggagggaagg--------aaggaagggaggaaaaaagga-------------------aga--gaaggagggaagga---------a-------- i macFas5.chr19 C 0 I 100 s papAnu2.chr19 47416195 434 + 51301725 GTCAAGTTGAcgcataaaattaaccatgac-ATCAGCTTATTTAATAAACTGGCTATATCTGCATATTTGCTCATTTGCCTAATGAGTTATCTCTATCACGCTCTGTGAAAGCAGAGATTTTCATTCG-TTTAGTTCACTGCTGAATTCCCaggg--cctagaacagtgcctgacacctaGTCGCTGT-CCAATAAATACATACTTGGGGAATGAACAAACCAATGAATGTAcggattcttttttattattaatagatCCTGGGACTTACTGA--ACAGTCTGGCAGCTAT-----------TAAA-CATTtaatggaaag-aaaggaggggagaaagaaggaagaaggaaggtaggaatgaaggaaagaaggaaagagggaagaaagg---------------------------------------aagggaaagagg----aaggaaggaagg--------aaggaaggagaaaggaaggga-------------------ggaaggaaaggaggaagga---------g-------- i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47114293 435 + 50890351 gtcaagttgacgcataaaattaaccatgac-atcagcttatttaataaactggctatatctgcatatttgctcatttgcctaatgagttatctctatcatgctctgtgaaagcagagattttcattcg-tttagttcactgctgaattcccaggg--cctagaacagtgcctcgcacctagtcgccgt-ccaataaatacatacttgggcaatgaacaaaCCAATGAATGTACGGATTCTTTTTTATTATTAATAGATCCCAGGGCTTACTGAACACAGTCTGGCAGCTAT-----------TAAA-CATTTAATTGAaag-aaacgaggggagaaggaaggaagaaggaaggtaggaatgaaggaaagaaggaaggagggaagaaagg---------------------------------------aagggagagagg----aaggaaggaagg---------agaaaggaagggaggaagga-------------------gaaaggaaggatggaagga---------g-------- i chlSab2.chr6 C 0 I 4 s calJac3.chr22 45644921 450 + 49145316 gtcaagttgatgcataaaattaaccatgac-aTCAGCTTATTTAATAAACTGGCCCTATCTGCATATTCGCTCATTTGCCTAATGAGTTACCTCTGTCGagctctgtgaaagcagaaattttcattcg-tttagctca-tgctgagtccccaggg---cgagaaccgtgcctgccacctagaagctgc-ccagtaaataAAGGCGGGGGGAACAAAAAAAACAATGAATGTACGGATTC-TCTTTATTATCAATAGATCCCAGGGCTAACTTAACACAGCCTGGCAGATACTGGGGATTTAATAAG-CATTTAATagaaag-aaaggaggggagaaggaaaagagaaggaaggtaggaatgaaagaaagaatgaaggaagaatggaaga---------------------------------------gagggagggagg----aaggaaagaagg--------caggaaggaaagaaaggaagg-------------------aag--gagggagggaggga---------gaaaggaag i calJac3.chr22 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I a score=184470.000000 s hg38.chr19_GL949747v2_alt 389627 123 + 729520 gaaggaaggaaggtaaaaaggaagag--agggaggaag----------------gaggaaggaagg-agaaaggaagagagggaggcaggga-----------------------gggagggaggg-------------------------------------------------a-ggaaggaaggg-gggagggagggagg----------------------gagggaggaagga s panTro4.chr19 59331949 121 + 63644993 gaaggaagg--gggagggagggaggg--aggaaggaagt--------------gggggagggaggg-agggaggaagaaaggaaggaaggg------------------------gggagggaggg-------------------------------------------------a-gggaggaaggaagggaggaagggag------------------------aaggaggaagga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56224874 181 + 60714840 gaaggaaggaagggagggagaaagaggaaggaaggaaggccagaaggcaggaagagggagggaagg-aaagaggaaagaaggaaggaaggaacgaaggagggaaggaagggaggggggagggagggaaag-aggaaagaagga--------------------------------a-ggaaggaaggagggaaggaaggaagg----------------------gaggggggaggga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102946913 198 - 106955855 gaaggaaggaaggtaaaaaggaagag--agggaggaag----------------gaggaaggaagg-agaaacgaagggagggaggcagagagggagggaggaaggaaggaaggaaagaaggaaggaaggaaggaaagaaggaaggaaggaaagaagtgggggagggagggaggga-ggaaggaaggaaggaagaaagggaggga--------------------gaaggaggaagga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60219867 127 + 64156825 gaaggaaggaaggtaaaaaggaagag--agggaggaag----------------aaggaaggaagg-agaaaggaagggagggaaggatgaa-----------------------gaaaggaagaa-------------------------------------------------agggagggagagaagaaaggaaggaaggaa--------------------gaaggagaaagga i rheMac3.chr19 I 167 I 4 s macFas5.chr19 55318480 127 + 59248254 gaaggaaggaaggtaaaaaggaagag--agggaggaag----------------aaggaaggaagg-agaaaggaagggagggaaggatgaa-----------------------gaaaggaagaa-------------------------------------------------agggagggagagaagaaaggaaggaaggaa--------------------gaaggagaaagga i macFas5.chr19 I 100 I 4 s papAnu2.chr19 47416630 144 + 51301725 gaaggaaggaaggaaaaaaggaacag--aaggagg--g----------------aaggaaggaagg-aggaaggaagggagggaggaaggaa-----------------------gggagggagga-------------------------------------------------a-ggagggaaggaaggaaggaaaaaaggaagagagggacgaagaaggaaggaaggagaaagga i papAnu2.chr19 I 1 I 4 s chlSab2.chr6 47114732 115 + 50890351 gaagggaggatgg-agaaaggaaggg--aggaagg--------------------------aaagg-aggaaggagggaaggaaggaaggaa-----------------------ggaaggaagga-------------------------------------------------a-ggaaggagaaaggaagggaggatggaga--------------------aaggaagggagga i chlSab2.chr6 I 4 I 376 s calJac3.chr22 45645371 130 + 49145316 agaggaaggaaggaagaaagggaggg--agggaggaaa----------------gaggaagggaggaaggaaggaagaaacggagggaggaaaga--------------------gaaagggagga-------------------------------------------------a-ggagggaggaaggaaggaaagagaaagg--------------------gaggaaggaagga i calJac3.chr22 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I a score=180171.000000 s hg38.chr19_GL949747v2_alt 389750 99 + 729520 agga---aggccagaaggcaggaag--g------ggtagggagggagggagggaaaga-----------------------ggaaagaaggaaggagggaagga------------------------------------------------------aggaag-ggaggcggggagggaggGAAAGA s panTro4.chr19 59332070 153 + 63644993 agga---aggccagaaggcaggaag--g------gggagggagggagggagggaaaga-----------------------ggaaggaaggaaggaaggaaggagggaaggaaggaaggaagggggagggagggagggaaagaggaaagaaggaaggaaggaag-ggaggCGGGGAGGGAGGGAAAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56225055 117 + 60714840 gggaaagaggaaagaaggaaggaag--gaaggaaggagggaaggaaggaagggaaaga-----------------------ggaaaaaaggaaggaaggaaggagggaagga----------------------------------------------aggaagaggggggagggagggagggaaaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102947111 95 - 106955855 agga---aggccagaaggcaggaag--g----------gggagggagggagggaaaga-----------------------ggaatgaaggaaggaagggaggg------------------------------------------------------aggcag-ggagggacggagggagggaaaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60219998 95 + 64156825 agga---aggccagaaggcaggaag--a----------gggaaggggggaaagaggaa-----------------------ggaaggaaggaagggagggtagg------------------------------------------------------agggag-ggagggagggagggagggaaaga i rheMac3.chr19 I 4 C 0 s macFas5.chr19 55318611 95 + 59248254 agga---aggccagaaggcaggaag--g----------gggagggagggaaggaggga-----------------------aagaggaaggaaggaagggaggg------------------------------------------------------taggag-ggagggagggagggagggaaaga i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47416778 120 + 51301725 aggg---agggctgaagaaaggaagaaa----------gggagggagagaagaaaggaaggaaggccagaaggcaggaagggggagggagggaaggagggaaag------------------------------------------------------aggaag-gaaggaagggagggagggaaaga i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 47115223 91 + 50890351 agga---aggccagaaggcaggaag--g----------gggagggagggaaggaggga-----------------------aagaggaaggaaggaagg----g------------------------------------------------------agggag-ggagggagagagggagggaaaga i chlSab2.chr6 I 376 C 0 s calJac3.chr22 45645501 96 + 49145316 agaa---agggagggagggagggag--g---------aaggaaggagaaagggaagga-----------------------gggaggaaggaaggaaaggaagg------------------------------------------------------agagag-ggaggaaggaagagaggaaaaaa i calJac3.chr22 C 0 n 0 e canFam3.chr1 19788021 11529 - 122678785 I a score=285276.000000 s hg38.chr19_GL949747v2_alt 389849 119 + 729520 TCATAAGGATGACTGAACATCTGAAGGCTGAACAGCTTTACGTATTTATGCCTTTTCCGGTCATTTTCTTATGTACTTGTGAATTCCTTCACTT----TGCTTTCCTTCTATTTGGCAGATGT s panTro4.chr19 59332223 123 + 63644993 TCATAAGGATGACTGAACATCTGAAGGCTGAACAGCTTTACGTATTTATGCCTTTTCTGGTCATTTTCTTATGTATTTGTGAATTCATTCACTTACTTTGCTTTCCTCCTATTTGGGAGATGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56225172 123 + 60714840 TCGTAAGGATGACTGAACATCTGAAGGCTGAACAGCTTTACGTATTTATGCCTTTTCTGGTCATTTTCTTACGTATTTGTGAATTCATTCACTTACTTTGCTTTCCTCCTATTTGGGAGATGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102947206 123 - 106955855 TCATAAGGATGACTGAACATCTGAAGGCTGAACAGCTTTACGTATTTATGCCTTTCCTGGTCATTTTCTTATTTACTTGTGAATTCATTCAGTTACTTTGCTTTCCTCCTATTTGGGAGATAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60220093 123 + 64156825 TCATAAGGATGACTGAACATCTGAAGGCTGAACAGCTTTATCTATTTATGCCTTTTCTGGTCATTTTCTTATCTTCTTGTGAATTCATTCACTTACTTTGCTTTCCTCCTATTTGGGAGATAT i rheMac3.chr19 C 0 I 12 s macFas5.chr19 55318706 123 + 59248254 TCATAAGGATGACTGAACATCTGAAGGCTGAACAGCTTTATCTATTTATGCCTTTTCTGGTCATTTTCTTATCTTCTTGTGAATTCATTCACTTACTTTGCTTTCCTCCTATTTGGGAGATAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47416898 123 + 51301725 tcaTAAGGATGACTGAACATCTGAAGGCTGAACAGCTTTATCTATTTATGCCTTTTCTGgtcattttcttatcttcttgTGAATTCATTCACTTACTTTGCTTTCCTCCTATTTGGGAGATAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47115314 119 + 50890351 TCATAAGGATGACTGAACATCTGAAGGCTGAACAGCTTTATC----TATGCCTTTTCTGGTCATTTTCTTATCTTCTTGTGAATTCATTCACTTACTTTGCTTTCCTCCTATTTGGGAGATAT i chlSab2.chr6 C 0 I 12 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45645597 0 + 49145316 I a score=13955.000000 s hg38.chr19_GL949747v2_alt 389968 42 + 729520 CACTGTAGTCATTTTT-AAAAATCAACAACTGTCACCCTCGTA s panTro4.chr19 59332346 42 + 63644993 CACTGTAGTCATTTTT-AAAAATCAACAACCGTCACCCTCGTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56225295 43 + 60714840 CACTGTAGTAATTTTTAAAAAATCAACAACCGTCACCCCCGTa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102947329 43 - 106955855 CACTGTAGTAATTTTTAAAAAATCAACAACCATCACCACCGTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55318829 12 + 59248254 ----------------------------GCCatcaccacc--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47417021 12 + 51301725 ----------------------------GCCATCACCACC--- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45645597 0 + 49145316 I e chlSab2.chr6 47115433 12 + 50890351 I e rheMac3.chr19 60220216 12 + 64156825 I a score=1159933.000000 s hg38.chr19_GL949747v2_alt 390010 524 + 729520 ATAATTCGCgagcgcttgtcaagcactttgtcagcaaacacttcccgcgtgttcactcgatctgcacaacaatcctgtggaattggttaaggttgc------tctttcttgcttt-tttttttttttttaaacagagtttcactcttgttgcccaggctggagtgaagtggtgcgatcctggctcactgcaacctctgcctcccgaattcaagcgattctcctgcctcagcctcctgagtcgctgggatcacaggcacgtgccaccatgctcggctaattttcgttatttttagtagagactgggtttcgtcatgttggccaggctggtctcgaactcctgatctcagctgatcc---cccccgccttggtctctcaaagtgctgggattacaggcatgagccactgagcctggccaaggttattattttcatcctgtttatgtgaaccgaaagcac--agagttgagaaaattgtctaaggtcaccgagctaataaggagctgagcc---agggttgaaaccagataatgtggctgca s panTro4.chr19 59332388 520 + 63644993 ATAATTCGcgagcacttgttaagcactttgtcagcaaacacttccc-----ttcactcgatctccacaacaaccctgtggaatcagttaaggttgc------tctttctttctttctttttttttttttaaacagagtttcactcttgttgcccaggctggagtgaagtggtgtgatcttggctcactgcaacctctgcctcccgaattcaagcgattctcctgcctcagcctcctgagtcgctgggatcacaggcacgtgccaccacgctcagctaattttcgttatttttagtagagactgggtttcgccatgttggccaggctggtctcgaactcctgacctcagctgatcc---ccccgatcttggtctcccaaagtgctgggattacaggcgtgagccactgggcctggccaaggttattattttcatcctatttatgtgaaccaaaagcac--agagttgagaaaattgtctaaggtcaccgagctagtaaggagctgagcc---agggttgaaaccagataatgtggctgca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56225338 535 + 60714840 ataattcgcgagcacttgttaagcacttgctcagcaaacacttcccgcatgttcactccatctccacaacaaccctgtggaatgagttaaggttgctttatttctttcttcctttcttttttttttttgagacagagtttcactcttgttgcccaggctggagtgaagtggcgcg-tcttggctcactgcaacctctgcctcccgaattcaagcgattctcctgcctcagcctcctgagtcgctgggatcataggcacgtgccaccacgctcagctaattttcgttatttttagtagagacggagtttcgccatgttggccaggctggtctcgaacccatgacttcagctgatcccctcccccgccttggtctcccaaagtgctgggattacaggcgtgagccactgggcctggccaaggttattattttcatcctatttatgtgaaccaaaagcacagagagttgagaaaattgtctaaggtcaccgagctaataaggagctgagcc---agggttgaaaccagataatgtggctgca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102947372 519 - 106955855 ATAATTCGCGAGCACAGgttaagcacttgctcagcaaacacttcccgcgtgttcactcgatctccacgacaaccctgtggaattagttaaggttgc------tcttttttttttttttttttttttttgagacagagtttcactcttgttgcccaggctggagtgaagtggcgcgatctcggctcactgcaacctctgcctcccga---------attctcctgcctcagcctcctgaatcgctgggatcataggcgcccaccatcatgctcagctaattttcgttatttttattagaggcagggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccc--ccccagccttggtctcccaaagtgctgggattacaggcgtgagccactgggccttgccaaggttattattttcatcctatttatgtgaaccaaaagcacagagagtagagaaaattgtctaaggtcacggagctaataaggagccaagct---agggttgaaatcagatagtgtggctgca i nomLeu3.chr10 C 0 I 124 s rheMac3.chr19 60220228 523 + 64156825 ataattcagtagcacatgttaagcactagctcagcaaacacttcccgcgtgttcactcaatct-cacaacagccctgtggaattagttaaggttac------tctctc-----tttttttttttttctgagacagagtttcactcttgttgcccaggctggagtgaagtggtacgatctcagctcactgcaacctccgtctcccgaattcaagtgattctcctgcctcagcctccagagtcgctgggcttataggcgcctgccaccacgctcagctaatttttgttatttttggtagagacagggttttgccatgttggccaggctggtcttgaactcctggcctcaggtgatc----cacccacctcggcctcccaaagtgctgggattacaggcgtgagccattgcgcctggccaaggttactattttcatcctatttatgtgaaccaaaagcacagagagttgagaaaattatctaaggtcaccgagctaataaagagccgagagaggagggttgaaaccagatagtgtgactgca i rheMac3.chr19 I 12 C 0 s macFas5.chr19 55318841 522 + 59248254 ataattcagtagcacatgttaagcactagctcagcaaacacttcccgcgtgttcactcaatct-cacaacagccctgtggaattagttaaggttac------tctctc------ttttttttttttctgagacagagtttcactcttgttgcccaggctggagtgaagtggtacgatctcagctcactgcaacctccgtctcccgaattcaagtgattctcctgcctcagcctccagagtcgctgggattataggcgcccaccaccacgctcagctaatttttgttatttttagtagagacagggttttgccatgttggccaggctggtctcgaactcctggcctcaggtgatc----cacccacctcggcctcccaaagtgctgggattacaggcgtgagccattgcgcctggccaaggttactattttcatcctatttatgtgaaccaaaagcacagagagttgagaaaattatctaaggtcaccgagctaataaagagccgagagaggagggttgaaaccagatagtgtgactgca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47417033 522 + 51301725 ATAATTCAGTAGCACATGTTAAGCACTAGCTCAGCAAACACTTCCCGCGTGTTCACTCaatct-cacaacagccctgtggaATTAGTTAAGgttac------tctctc------tcttttttttttctgagacagagtttcactcttgttgcccaggctggagtgaagtggtacgatctcagctcactgcaacctccgtctcccgaattcaagtgattctcctgcctcagcctccagagtcgctgggattataggcgcccgccaccacgctcagctaatttttgttatttttagtagagacagggttttgccatgttggccaggctggtctcgaactcctggcctcaggtgatc----cacccgcctcggcctcccaaagtgctgggattacaggcgtgagccactgcgcctggccaaggttACTATTTTCATCCTATGTATGTGAACCAAAAGCACAGAGAGTTGAGAAAATTGTCTAAGGTCACCGAGCTAATAaagagctgagacaggagggttgAAACCAGATAGTGTGACTGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47115445 526 + 50890351 ataattcagtagcacatgttaagcactagctcagcaaacacttcccgcgtgttcactcaatct-cacaacagccctgtggaattagttaaggttac------tctcttct--ttttttttttttttctgagacagagtttcactcttgttgcccaggctggagtgaagtggtgcgatctcagctcactgcaacctccgtctcccgaattcaagtgattctcctgcctcagcctccagagtcactgggattataggcgcctgccaccacgctcagctaatttttgttatttttagtagagacagggttttgccatgttggccaggctggtctcgaactcctggcctcaggtgatc----cacccgcctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcctggccaaggttactattttcatcctatttatgtgaaccaaaagcacagagagttgagaaaattgtctaaggtcaccgagctaataaagagccgagacaggagggttgaaaccagatagtgtgactgca i chlSab2.chr6 I 12 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45645597 0 + 49145316 I a score=306622.000000 s hg38.chr19_GL949747v2_alt 390534 128 + 729520 aagcatgaactcttagtcaTGCCAATCATGAACTAAAGAGCGTCcttcatttgtgtctctgttcagatatcatccaaatggagagagagacattccctgagcaccttctattatataagtagcaacca s panTro4.chr19 59332908 128 + 63644993 aagcatgaactcttagtcaTGCCAATCATGAACTAAAGAGCGTCcttcatttgtgtctctgttcaaatatcatccaaatggagagagagacattccctgagcaccttctattatataagtagcaacca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56225873 128 + 60714840 aagcatgaactcttagtcaTGCCAATCATGAACTAAAGAGCGTCcttcatttgtgtctctgttcaaatatcatccaaacggagagagagacattccctgagcaccttctattatataagtagcaacca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102948015 128 - 106955855 AAGCCTGAACTCTTAGTCATACCAGTCATGAACTAAAGAacgtccttcatttgtgtctctgttcaaatatcatccagatggagagagagacattccctgagcaccttctattatataggtagcaacca i nomLeu3.chr10 I 124 C 0 s rheMac3.chr19 60220751 128 + 64156825 aagcctgagctcttagtcaTGCCAATCATGAACTAAAGAACGTCCTTCATTTGTGTCTCTGTTCAAATATCACCCAAATGGAGACAGAGACATGCCCCGAGCACCTTCTGTTACATAAGTAGCAACCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55319363 128 + 59248254 aagcctgagctcttagtcaTGCCAATCATGAACTAAAGAacgtccttcatttgtgtctctgttcaaatatcacccaaatggagacagagacatgccccgagcaccttctgttacataagtagcaacca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47417555 128 + 51301725 AAGCCTGAGCTCTTAGTCATGCCAATCATGAACTAAACAGCGTCCTTCATTTGTGTCTCTGTTCAAATATCACCCAAATGGAGACAGAGACATGCCGCGAGCACCTTCTGTTACATAAGTAGCAACca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47115971 128 + 50890351 aagcctgagctcttagtcaTGCCAATCATCAACTAAAGAGCATCcttcatttgtgtctctgttcaaatatcacccaaatggagacagagacatgccccgagcaccttctgttacataagtagcaacca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e calJac3.chr22 45645597 0 + 49145316 I a score=110636.000000 s hg38.chr19_GL949747v2_alt 390662 36 + 729520 ccagacgtggtggctcacgcctgtaatcccagcact s panTro4.chr19 59333036 36 + 63644993 ccaggcgtggtggctcacgcctgtaatcccagcact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56226001 36 + 60714840 ccgggcatggtggctcacacctgtaatcccagcact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102948143 36 - 106955855 ccgggcgtggtggctcatgcctgtaatcccagcact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60220879 36 + 64156825 ccgggcgtggtggctcatgcctgtaatcccagcact i rheMac3.chr19 C 0 I 823 s macFas5.chr19 55319491 36 + 59248254 ccgggcgtggtggctcatgcctgtaatcccagcact i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47417683 36 + 51301725 cggggcgcggtggctcacgcctgtaatcccagcact i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47116099 36 + 50890351 cggggtgcagtggctcatgcctgtaatcccagcact i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3501190 36 - 49145316 ccgggcgcggtggctcacgcctgtaatcccagcact i calJac3.chr22 I 88803 C 0 e canFam3.chr1 19788021 11529 - 122678785 I a score=977510.000000 s hg38.chr19_GL949747v2_alt 390698 491 + 729520 ttgggaggccgaggcaggtggatcatgaggtcaggagttcaagacaagcctggccaagatggtgaaaccccgtctctactaaaaatacaaaaaattagctgagtgtgatggcaggcacctgtaatcccagctacttggg-----aggctgaggcagataattgcttgaaccggggaggtggaggttgcagtgaaccaagatcacgccactgcactccagcctgggcaacagagcaagactctgtctcaaaaaaaaaaaa-------------------------------------------------------------------------------------------gtagtgaccacct--------catccccaccacatccactcacatctatgtgttgcttcctcttacctgatagtatagactcagctcacctgttcattcctcaattttctaccttctgtactccagcggttttagttgtgccaactggagactttgtcttttttgcttatgcccatttctccagaacatgcagcagtgcctgggacatagtaggcactcaatacgtgtgtggggaacagatacat s panTro4.chr19 59333072 495 + 63644993 ttgggaggccgaggcaggtggatcatgaggtcaggagttcaagacaagcctggccaagatggtgaaaccccgtctctactaaaaatacaaaaaattagctgggtgtgatggcgggcacctgtaatcccagctactcggg-----aggctgaggcagataattgcttgaaccggggaggtggaggttgcagtgaaccaagatcacgccactgcactccagcctggacaacagagcaagactctgtctcaaaaaaaaaaaa-------------------------------------------------aaaa--------------------------------------gtagtgaccacct--------catccccaccacatccactcacatctatgtgttgcttcctcttacctgatagtatagactcagctcacctgttcattcctcaattttctaccttctgtactccagcggttttagttgtgccaacgggagactttgtcttttttgcttatgcctgtttctccagaacatgcagcggtgcctgggacatagtaggcactcaatacgtgtgtggggaacaggtacat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56226037 508 + 60714840 ttgggaggccgaggcaggtggatcatgaggtcaggagttcaagacaagcctggccaagatggtgaaaccccgtctctactaaaaatacaaaaaattagctgggtgtggtggcgggcacctgtaatcccagctgctcggg-----aggctgaggcagataattgcttgaaccggtgaggtggaggttgtagtgaaccgagatcacgccactgcactccagcctgggcaacagaggaagactctg-ctcaaaaaaaaaaaaaaaaaaaa----------------------------------aaaaaaaaaaa--------------------------------------ggagcaaccacct--------gattcccaccacatccactcacatctatgtgctgcttcctcttacctgatagtatagactcggctcacctgttcattcctcaattttctaccttctctactccagcagttttagttgt-cctaccggagactttgtcttttttgcttatccccgtttctccagaacatgtagcagtgcctgggacatagtaggcactcaatacgtgtgtggggaacagatacat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102948179 494 - 106955855 ttgggagaccgaggcaggtggatcatgaggtc---agttcaagacaagcctggccaagatggtgaaaccccatctctactaaagatacaaaaaattagctgggtgtggtggcgggctcc-gtaattccagttactcggg-----aggctgaggcagagaattgcttgaaccggggaggtggaagttgcagtgaaccgagatcacgccactgcactccagcctgggcaacagagcaagactctgtctcaaaaaaaaaaaa----------------------------------------------aaaaaaa--------------------------------------gtagcaaccacct--------catccccaccacttccactcatgtctatgtgctgcttcctcttgcctgacagtatggactcggctcacctgttcattcctcaattttctaccttctctactccagcagtttcacttgtgccaaccggagaccttgtcttttttccttatccccgcttctctagaacatgcagcaatgcctgggacacagtaggcactcaacacatgtgtggggaacagatACGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55319527 513 + 59248254 ttgggaggctgaggcgggtggatcacgaggtcaggagttcaagacaagcctggccaagatggtgaaaccccatctctactaaaaatacaaaaaattacttgggtgtggtggcgggcacctgtaatcccagctactcggg-----aggctgaggcagagaattgcttgaactgggtaggtggaggttacagtgaactgagatcatgccactgcactccagcctgggcaacagagcaagacactatctcaaaaaaaaaaaa---aaaaa----------------------------------aaaaaaacaaa--------------------------------------ggagcaaccaccccatccccgcatccccaccacatccactcacatctgtgtgttgcttcctcttacctgatagtacagactcggctca-ctgttcattcctcaattttctaccttctctactctggcagttttagttgtgccaatgggaaactttgtcttttttgcttatccccgtttctctagaacttgcagcagtgcctgggacatagtaggca-tcgatatgtgtgtgGGGGACAGACACAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47417719 527 + 51301725 ttgggaggctgaggcgggtggatcacgaggtcaggagttcaagacaagcctggccaagatggtgaaaccccatctctactaaaaatacaaaaaattacctgggtgtggtggcgggcacctgtaatcccagctactcggg-----aggctgaggcagagaattgcttgaactgggtaggtggaggttacagtgaactgagatcatgccactgcactccagcctgggcaacagagcaagacactatcgcaaaaaaaaaaga---aaaaa----------------------------------aaaaaaagaaaaaaaaaaaagaa------------------------agggagcaATCCCCCTATGCCCCCATCCCCACCACATCCACTCACATCTATGTGTTGCTTCCTCTTACCTGATAGTACAGACTCGGCTCA-CTGTTCATTCCTCAATTTTCTACCTTCTCTACTCCGGCAGTTTTAGTTGTGCCAACGGGAAACTTTGTCTTTTTTGCTTATCCCCGTGTCTCCAGAACGTGCAGCAGTGCCTAGGACATAGTAGGCA-TCGATATGTGTGTGGGGGACAGACACAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47116135 487 + 50890351 ttgggaggccgaggcgggtggatcatgaggtcaggagttcaagacaagcctggccaagatggtgaaaccccatctctactaaaaatacaaaaaattacctgggtgtggtggcgggcacctgtaatcccagctacttggg-----aggctgaggcagagaattgcttgaactaggtaggtggaggttacagtgaactgagatcatgccactgcactccagcctgggcaacagagcaagacactatctcaa-----------------------------------------------------------------------------------------------------ggagcaaccaccccatccccacatccccaccacatccactcacatctgtgtgttgcttcctcttacctgatagtacagactcggctca-ctgttcattcctcaattttctaccttctctactacggcagttttagttgtgtcaatgggaaactttgtcttttttgcttatccccgtttctctagaacatgcagcagtgcctgggacatagtaggca-tcgatgtgtgtgtgGGGGACAGACACAT i chlSab2.chr6 C 0 I 507 s calJac3.chr22 3501226 546 - 49145316 ttgggaggccaaggcgtgtggatcaccaggtcaagggatcgagaccatccgggtcaacgtggtgaaaccctgtctctactaaaaatacataaaattagctgggcatgg-ggcgcgcgcctgtagtcccagctactctggcgagcaagctgagagaagga-------------------------ccgcacggaac---------------gcctggcagcctgggtaacagagcgagactttgtctcaagaaaacaaacagaaaaaaCTCCTTCATTTGTGTCTCTGTTCAATTATCACCCAAATGGAGAGAGAGAGAGAGACATTCCCCGAGCATCTCCTGTCGTGTACATAGCTACCGCCT--------CATCCCCACCACATGCACGCACATCTGTGTGTTGCTTCCTCTCACCCGACGGTGTAGACGCGACTCACCTGTTCATTTCCCAGTTTCCTACCTTCCCTACTCCAGCAGTTTTACTTGTGCCACCcggagacttggttttttttgcttatccccgtgtctccagaacatgcagcggtgcctgggacatagtaggcactcaacacatgtgtgGGGGACAGATACGT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e rheMac3.chr19 60220915 823 + 64156825 I a score=2100.000000 s hg38.chr19_GL949747v2_alt 391189 1 + 729520 C s panTro4.chr19 59333567 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56226545 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102948673 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55320040 1 + 59248254 C i macFas5.chr19 C 0 I 378 s papAnu2.chr19 47418246 1 + 51301725 C i papAnu2.chr19 C 0 C 0 s calJac3.chr22 3501772 1 - 49145316 C i calJac3.chr22 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e chlSab2.chr6 47116622 507 + 50890351 I e rheMac3.chr19 60220915 823 + 64156825 I a score=14489.000000 s hg38.chr19_GL949747v2_alt 391190 18 + 729520 ATTGAAGCACAGCTGTTA s panTro4.chr19 59333568 18 + 63644993 ATTGAAGCACAGCTGTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56226546 18 + 60714840 ATGGAAGCACAGCTGTTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102948674 18 - 106955855 ATTGAAGCACAGCTGCTA i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 3501773 18 - 49145316 ATTGAAGCACAGCTGATG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e chlSab2.chr6 47116622 507 + 50890351 I e papAnu2.chr19 47418247 0 + 51301725 C e macFas5.chr19 55320041 378 + 59248254 I e rheMac3.chr19 60220915 823 + 64156825 I a score=73408.000000 s hg38.chr19_GL949747v2_alt 391208 26 + 729520 GCACAGCACACATGGTCCTGatttat s panTro4.chr19 59333586 26 + 63644993 GCACAGCACACATGGTCCTGatttat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56226564 26 + 60714840 GCACAGCACACGTGGTCCTGatttat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102948692 26 - 106955855 GCACAGCACACGTGGTCCTGatttat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60221738 26 + 64156825 gCACAGCACACGTGGTCCTGatttat i rheMac3.chr19 I 823 C 0 s macFas5.chr19 55320419 26 + 59248254 gCACAGCACATGTGGTCCTGatttat i macFas5.chr19 I 378 C 0 s papAnu2.chr19 47418247 16 + 51301725 ----------TGTGGTCCTGATTTat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47117129 26 + 50890351 gCACAGCACACGTGGTCCTGatttat i chlSab2.chr6 I 507 C 0 s calJac3.chr22 3501791 26 - 49145316 GCACAGCACATGTGGTCCTGAtttct i calJac3.chr22 C 0 I 313 e canFam3.chr1 19788021 11529 - 122678785 I a score=15488.000000 s hg38.chr19_GL949747v2_alt 391234 6 + 729520 tgagaa s panTro4.chr19 59333612 6 + 63644993 tgagaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56226590 6 + 60714840 tgagca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102948718 6 - 106955855 tgagaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60221764 6 + 64156825 tgagag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55320445 6 + 59248254 tgagag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47418263 6 + 51301725 tgagga i papAnu2.chr19 C 0 I 601 s chlSab2.chr6 47117155 6 + 50890351 tgagaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3502130 6 - 49145316 tgagga i calJac3.chr22 I 313 C 0 e canFam3.chr1 19788021 11529 - 122678785 I a score=120685.000000 s hg38.chr19_GL949747v2_alt 391240 56 + 729520 cctactatgtgctaggcacaggaccaagcagttggaaatctct-cctggcattctta s panTro4.chr19 59333618 56 + 63644993 cctactatgtgctaggcacaggaccaagcagttggaaatctct-cctggcattctta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56226596 56 + 60714840 cctactacgtgctaggcacagga-caagcacttggaaatctctccctggcatcctta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102948724 56 - 106955855 cctactacatgctaggcacaggaccaagcactgggaaatctct-cctggcatcctta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60221770 56 + 64156825 cctactacatgccaggcacagggccgagcgcttggaaatctct-cctggcatcctta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55320451 56 + 59248254 cctactacatgccaggcacagggccgagcgcttggaaatctct-cctggcatcctta i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47117161 56 + 50890351 cctactacatgctaggcacagggccgagtgcttggaaatctct-cctggcatcctta i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3502136 56 - 49145316 cctactatgcgctaggcactggcccaagcacttggaaatctct-cctggaatcctta i calJac3.chr22 C 0 C 0 e canFam3.chr1 19788021 11529 - 122678785 I e papAnu2.chr19 47418269 601 + 51301725 I a score=480573.000000 s hg38.chr19_GL949747v2_alt 391296 171 + 729520 cag-ccactcagttaagcaggcaAGTCTCCCAAAGCTTAAGCCGTGGGAAGCACATGCTGAGTCCTTCAGCCAGGAGCTGTCCTTGCCTTCTGTCAGCAGAAGCTGGTCAGGAGGCCTTCCTGGAGGAGGCAGCATCA---CTGCCTCCCCCAATCTTCCCTCCCATCCCTGTGG- s panTro4.chr19 59333674 171 + 63644993 cag-ccactcagttaagcaggcaAGTCTCCCAAAGCTTAAGCCGTGGGAAGCGCATGCTGAGTCCTTCAGCCAGGAGCTGTCCTTGCCTTCTGTCAGCAGAAGCTGGTCAGGAGGCCTTCCTGGAGGAGGCAGCATCA---CTGCCTCCCCCAGTCTTCCCTCCCATCCCTGTGG- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56226652 172 + 60714840 cagcccactcagttaagcaggcaAGTCTCCCAAAGCTTAAACCGTGGGAAGCACATGCTGAGTCCTTCAGCCAGGAACTGTCCTTGCCTTCTGTCAGCAGAAGCTGGTCAGGAGGCCTTCCTGGAGGAGGCAGCATCA---CCGCCTCCCCCAAGCTTCCCTCCCAGCCCTGTGG- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102948780 171 - 106955855 cag-ccactcagttacgcaggCGAGTCTCCCAAAGCTTCAGCCATGGGAAGCACATGCTGAGTCCTTCAGCCAGGAGCTGTCCTTGCCTTCTGTCAGCAGAAGCTGGTCAGGAGGCCTTCCTGGAGGAGGCAGCATCA---CCGCCTCCCCCAAGCTTCCCTCCCAACCCTGTGG- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60221826 171 + 64156825 cag-ccactcagttaagcaggcaAGTCTCCCAAAGCTTAAGCCATGGGAAGCACATGCTGAATCCTTCAGCCAGGAGCTGCCCTTGCCTTCTGTCAGCAGAAGCTGGTCAGGAGGCCTTCCTGGAGGAGGCAGCATCA---CCGCCTGCCCCAAGCTTCCCTCCCATCTCTGTGG- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55320507 171 + 59248254 cag-ccactcagttaagcaggcaAGTCTCCCAAAGCTTAAGCCATGGGAAGCACATGCTGAATCCTTCAGCCAGGAGCTGCCCTTGCCTTCTGTCAGCAGAAGCTGGTCAGGAGGCCTTCCTGGAGGAGGCAGCATCA---CCGCCTGCCCCAAGCTTCCCTCCCATCTCTGTGG- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47117217 171 + 50890351 cag-ccactcagttaagcaggCGAGTCTCCCAAAGCTTAAGCCATGGGAAGCACATGCTGCATCCTTCAGCCAGGAGCTGCCCTTGCCTTCTGTCAGCAGAAGCTGGTCAGGAGGCCTTCCTGGAGGAGGCAGCATCA---CCGCCTGCCCCAAGCTGCCCTCCCATCTCTGTGG- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3502192 174 - 49145316 caa-ccactcagttaagcaggtGAGTCTCCCAAAGTTTAAGCCATGGGAAGCACAGGTGGAGTCCTTCAGCCAGGAGCCGCCCTCGCCTTCTGTCAGTAGAAGCTGGTCAGGAGGCCTTCCTGGAGGCGGCGGTACCACTGCCGCCTGCCCCAAGCTTCCCTCCCACCCCTGTGG- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19799550 172 - 122678785 cAA-CCACCTTGTTAAGCTGGCAAGTATCCCAGAGTTTGAGTCTTGTGGAGTACATGCTGAACCCTTTAGCCAGGAGCTGATTTGGCCTTCCATCGAGAGAGGTAGGTTAGGAGGCCTTCCTGGAGGAGGTGGCTTTG---CTGCCTGTCTCTGGCTTCCCTCCTGCATCTCTGGG i canFam3.chr1 I 11529 C 0 e papAnu2.chr19 47418269 601 + 51301725 I a score=1488349.000000 s hg38.chr19_GL949747v2_alt 391467 416 + 729520 CTGCTCCTTCTCAGTCTCATTGTGGGCCCCTCTTTCTCCACTTGTCCC-TTTCATGCCTGTACTACTCCATGTCTGGCTAGACcagagcttataaaccagccagctccaacccacagacaggttttatttggcccacacagca---ttttttttt--------cat-ttgaattagttttaacatttaaaagctgagggattttgcttttaaaaatatccagatttctgccttctcttggaaatttggaacatctggtggtgccaggtccctcttcccatatggcaagcgttggctgaaacgaaatagcaacagccATGTTCTCTGAGCTACCCTCTACCAGGGGGTTTGCATGCGTCCCAAGCCATGAATGAACACCTGCAGAGCTTGAGATGGTTT--AGGGGTGGTATTCAGCCAAGGGCTCTAGAAA s panTro4.chr19 59333845 418 + 63644993 CTGCTCCTTCTCAGTCTCATTGTGGGCCCCTCTTTCTCCACTTGTCCC-TTTCATGCCTGTACTACTCCATGTCTGGCTAGACcagagcttataaaccagccagctccaacccacagacaggttttatttggcccacacagca---ttttttttt-tt-----cat-ttgaattagttttaacatttaaaagctgagggattttgcttttaaaaatatccagatttctgccttctcttggaaatttggaacatctggtggtgccaggtccctcttcccatatggcaagcgttggctgaaacgaaatagcaacagccATGTTCTCTGAGCTACCCTCTACCAGGGGGTTTGCATGCGTCCCAAGCCGTGAATGAACACCTGTAGAGCTTGAGATGGTTT--AGGGGTGGTATTCAGCCAAGGGCTCTAGAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56226824 419 + 60714840 CTGCTCCTTCTCAGTCTCACTGTGGGCCCCTCTTTCTCCATTTGTCCC-TTTCATGCCTGTACTACTCCATGTCTGGCTAGACcagagcttacaaaccagccagctccaacccacagacaggttttatttggcccacacggca---tttttttttttt-----cat-ttgaattagttttaacatttaaaagctgagggattttgcttttaaaaatatccagatttctgccttctcttggaaatttggaacatctggtggtgccaggtccctcttcccatatggcaagcgttggctgaaacgaaatagcaacagccATGTTCTCTGAGCTACCCGCTACCAGGGGGTTTGCATGCGTCCCAAGCCGTGAATGAACACCTGTAGAGCTTGAGATGGTTT--AGGGGTGGTATTCGGCCAAGGGCTCTAGAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102948951 418 - 106955855 CTGCTCCTTCTCAGTCTCATTGTGGGCCCCTCTTTCTCCACTTGTCCC-TTTCATGCCTGTACTACTCCATGTCTGGCTAGACcagagcttacagaccagccagctccaacccacagacaggttttatttggcccacacagca---ttttttttt-tt-----cat-ttgaattagttttaacatttaaaagctgagggattttgcttttaaaaatatccagatttctgccttctcttggaaatttggaacatctggtggtgccaggtccctcttcccatatggcaagcgttggctgaaacgaaatagcaacagccATGTTCTCCGAGCTACCCTCTACCAGGGGGTTTGCACGCGTCCCAAGCCGTGAATGAACACCTGTAGAGCTTGAGATGGTTT--GCGGGCGGTGTTCGGCCAAGGGCTCTAGAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60221997 419 + 64156825 CTGCTCCTTCTCAGTCTTTTTGTGGGCCCCTCTTTCTCCACTTGTCCC-TTTCATGCCTGTGCTACTCCATGCCTGGCTAGACcagagcttacaaaccagccag-tccaacccacagacaggttttatttggcccacacagca-ttttttttttt-tt-----cat-ttgaattagttttaacatttaaaagctgagggattttgcttttaaaaatatccagatttctgccttctcttggaaatttggaacatctggtggtgccaggtccctcttcccatatggcaagcgttggctgaaacgaaatagcaacAACCATGTTCTCTGAGCTCCCCTCTACCAGGGGGTTTGCACACGTCCCAAGCCGTGAATGAACACCTGTAGAGCCTGAGATAGTTT--GGGGGTGGTATTTGGCCAAGGGCTCTAGAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55320678 416 + 59248254 CTGCTCCTTCTCAGTCTTTTTGTGGGCCCCTCTTTCTCCACTTGTCCC-TTTCATGCCTGTGCTACTCCATGCCTGGCTAGACcagagcttacaaaccagccag-tccaacccacagacaggttttatttggcccacacagca----tttttttt-tt-----cat-ttgaattagttttaacatttaaaagctgagggattttgcttttaaaaatatccagatttctgccttctcttggaaatttggaacatctggtggtgccaggtccctcttcccatatggcaagcgttggctgaaacgaaatagcaacAACCATGTTCTCTGAGCTCCCCTCTACCAGGGGGTTTGCACACGTCCCAAGCCGTGAATGAACACCTGTAGAGCCTGAGATAGTTT--GGGGGTGGTATTTGGCCAAGGGCTCTAGAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47418870 420 + 51301725 CTGCTCCTTCTCAG-CTTTTTGTGGGCCCCTCTTTCTCCACTTGTCCC-TTTCATGCCTGTGGTACTCCATGCCTGGCTAGACCAGAGCTTACAAACCAGCCAGCTCCAACCCACAGACAGGTTTTATTTGGCccacacagca-ttttttttttt-tt-----catattgaattagttttaacatttaaaagctgagggattttgcttttaaaaatatccagatTTCTGCCTTCTCTTGGAAATTTGGAACATCTGGTGGTGCCAGGTCCCTCTTCCCATATGGCAAGCGTTGGCTGAAACGAAATAGCAACAACCATGTTCTCTGAGCTCCCCTCTACCAGGGGGTTTGCACACGTCCCAAGCCGTGAATGAACACCTGTAGAGCCTGAGATAGTTT--GGGGGTGGTATTCGGCCAAGGGCTCTAGAAA i papAnu2.chr19 I 601 C 0 s chlSab2.chr6 47117388 421 + 50890351 CTGCTCCTTCTCAGTCTTTTTGTGGGCCCCTCTTTCTCCACTTGTCCC-TTTCATGCCTGTGCTACTCCATGCCTGGCTAGACcagagcttacaaaccagccagctccaacccacagacaggttttatttggcccacacagcatttttttttttt-tt-----cat-ttgaattagttttaacatttaaaagctgagggattttgcttttaaaaatatccagatttctgccttctcttggaaatttggaacatctggtggtgccaggtccctcttcccatatggcaagcgttggctgaaacgaaatagcaacAACCATGTTCTCTGAGCTCCCCTCTATCAGGGGGTTTGCACACGTCCCAAGCCGTGAATGAACACCTGTAGAGCCTGAGATAGTTT--GGGGGTGGTATTTGGCCAAGGGCTCTAGAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3502366 388 - 49145316 CTGCT-----------------------CCTCTTTCTTCACTCGTCCCTTTTCATGCCTGTGCTACTGCA-GTCTGGCTGAA---------Acaaaccagctagctccgacccacagacaggttgtatttggcccacacagca---ctttttttt-tt-----cat-ttgaattagttttaacatttaaaagctgagggattttgcttttaaaaatatccagatttctgccttctcttggaaatttggaacatctggtggtgccgggtccctctttccatatggcaagcgttggctgaaacgaaatagtaacaaccATGTCCTCTGAGCTACCCTCCACCAGGGGGTTCTCACACGTCCCAGGCCGTGAATTAACACCTGTAGAGCTTGAGATGGTTTGGGGGGGTGGCATTTGGCCAACGACTCTAGAAA i calJac3.chr22 C 0 N 0 s canFam3.chr1 19799722 409 - 122678785 CTGCTCCTCTGCAGCCTCCTTGTGGGTACCT-------------TCCT-TTGTTTGCTGGTGCTGCTGAGCATCTGGCTAGACCAGAGCTTATAAATCAgccagatccaacccacagacaggttttatttggcccacacagta---ttttttttt-tttttggtat-ttgaattagttttaacatttaagagctgagggattttgcttttaaaaatatccaaatttctgtcttctcctgaaaatttgaaacatctggcattgctgggtccctcttcccatatggcaatcattgcctgaaacCAGACAGGAACAACCACATTCTCTGAGCCCTTCTCCAATGGGGGTTTCTCAGG-GACCCCAGCCCTGAATTAATACCTATAGAGCTTGAGATGGCAT--TGCAGTGGTATTCAGCCAAGAACTCTAGAAA i canFam3.chr1 C 0 C 0 a score=406132.000000 s hg38.chr19_GL949747v2_alt 391883 153 + 729520 TACCCAAGGGCCACCTGGAATGACCGTTTGTTTTCCTCAGCAGAAACAGACCCAGGGAACCACGGCCGGAGAAGGT-AGAGATAATACATTTCTGTCAGGCAGCATTGCAGATGTCCCATGCAGGAGGATGGATGTCCTGGGTTTAATCGATGC s panTro4.chr19 59334263 153 + 63644993 TACCCAAGGGCCACCTGGAATGACCGTTTGTTTTCCTCAGCAGAAACAGACCCAGGGAACCACGGCCGGAGAAGGT-AGAGATAATACATTTCTGTCAGGCAGCATTGCAGATGTCCCATGCAGGAGGATGGATGTCCTGGGTTTAATCGATGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56227243 153 + 60714840 TACCCAAGGGCCAGGTGGAATGACCGTTTGTTTTCCTCAGCAGAAACACACCCAGGGAACCACGGCTGGAGAAGGT-AGAGATAATACATTTCTGTCAGGCAGCATTGCAGATGTCCTATGCAGGAGGATGGATGTCCTGGGTTTAATCGATAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102949369 153 - 106955855 TACCCAAGGGCCACCTGGAATGACTGTTTGTTTTCCTCAGCAGAAACAGACCCAGGGAACCACGGCTGGAGAAGGT-GGAGATAACACATTTCTGTCAGGCAGCGTTGCAGATGTCCCATGCAGGAGGATGGATGTCCTGGGTTGAATCGATAC i nomLeu3.chr10 C 0 M 2239 s rheMac3.chr19 60222416 149 + 64156825 TACCCGAAGGCCACCTGGAATGACC----GTTTTCCTCAGCAGAAACAGACCCAGGGAACCACAGCCAGAGAAGGT-GGAGATAACACATTTCTGTCAGGCAGCAATGCAGATGTCCCATGCAGGAGGATGGATGTCCTAGGTTTAATCCATAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55321094 149 + 59248254 TACCCGAAGGCCACCTGGAATGACC----GTTTTCCTCAGCAGAAACAGACCCAGGGAACCACAGCCAGAGAAGGT-GGAGATAACACATTTCTGTCAGGCAGCAATGCAGATGTCCCATGCAGGAGGATGGATGTCCTAGGTTTAATCCATAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47419290 149 + 51301725 TACCCGAAGGCCACCTGGAATGACC----GTTTTCCTCAGCAGAAACAGACCCAGGGAACCACAGCCAGAGAAGGT-GGAGATAACACATTTCTGTCAGGCAGCAATGCAGATGTCCCATGCAGGAGGATGGATGTCCTAGGTTTAATCCATAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47117809 149 + 50890351 TACCCGAAGGCCACCTGGAATGACC----GTTTTCCTCAGCAGAAACAGACCCAAGGAACCACAGCCAGAGAAGGT-GGAGATAACATATTTCTGTCAGGCAGCAATGCAGATGTCCCATGCAGGAGGATGGATGTCCTAGGTTTAATCCATAC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19800131 154 - 122678785 TGCTTAGGGACTACCCTGGAAAAACATTTGTCTTTCCCATGAGAAACAGACTCAGGGAGCAAGGGCAGGAGGAGGTCAAAGAGAACAAATTTCTGTCAGACAGCATCTCAGCTCTCCCATTGACTGGGATGGATGTCTTGGGCTCAATCAGTAA i canFam3.chr1 C 0 C 0 a score=64972.000000 s hg38.chr19_GL949747v2_alt 392036 33 + 729520 AGGCT--AAGCCATTCTCTAAAGAG-GCTTGCCTTC s panTro4.chr19 59334416 33 + 63644993 AGGCT--AAGCCATTCTCTAAAGAG-GCTTGCCTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56227396 33 + 60714840 AGGCT--AAGCCATTCTCTAAAGAG-GCTTGCCTTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60222565 33 + 64156825 AGGCT--AAGCCATTCTCTAAAGAG-GCTTGCCTTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55321243 33 + 59248254 AGGCT--AAGCCATTCTCTAAAGAG-GCTTGCCTTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47419439 33 + 51301725 AGGCT--AAGCCATTCTCTAAAGAG-GTCTGCCTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47117958 33 + 50890351 AGGCT--CAGCCATGCTCTAAAGAG-GCTTGCCTTC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19800285 36 - 122678785 AGGTTGGAAGTAAAGCCTTAAAGAATGCGAACCTTC i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102949522 2239 - 106955855 M a score=161085.000000 s hg38.chr19_GL949747v2_alt 392069 60 + 729520 TGGGGCCCAAAACACATGTgagggagacagagaggtggggacag-aaagagccagagtaaa s panTro4.chr19 59334449 60 + 63644993 TGGGGCCCAAAACACATGTGAGGGAGACAGAGAGGTGGGGACAG-AAAGAGCCAGAGTAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56227429 60 + 60714840 TGGGGCCCAAAACATATGTGAGGGAGACAGAGAGGTGGCGATAG-AAAGAGCCAGAGTAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102951761 61 - 106955855 TGGGACCCAAAACACATGTgagggagacagagaggtggggacagaaaagagccagagtaaa i nomLeu3.chr10 M 2239 C 0 s rheMac3.chr19 60222598 60 + 64156825 TGGGGCCCAAAACACATGCGAGGGAGACAGAGAGGTGGGGACAG-AAAGAGCTGGAGTAAA i rheMac3.chr19 C 0 I 7 s macFas5.chr19 55321276 60 + 59248254 TGGGGCCCAAAACACATGCgagggagacagagaggtggggacag-aaagagctggagtaaa i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47419472 60 + 51301725 TGGGGCCCAAAACACGTGCgagggagacagagaggtggggacag-aaagagctggagtaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47117991 60 + 50890351 TGGGGCCCAAAACACATGCgagggagacagagaggtggggacag-aaagagctggagtaaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19800321 50 - 122678785 TGGGACCCAAATCATAT--gagagagacagagagat----acaa-gaggagacagag---- i canFam3.chr1 C 0 C 0 a score=39238.000000 s hg38.chr19_GL949747v2_alt 392129 50 + 729520 gcagagagagagagagaaagagataa--------------agagagagagagag--agacagagag s panTro4.chr19 59334509 52 + 63644993 GCAgagagagagagagaaagagataa--------------agagggagagagagacagagagagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56227489 40 + 60714840 GCAgagagagagagagagagagagag--------------agagaaagagagag------------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102951822 28 - 106955855 gcagagagagagagatatag--------------------------agagagag------------ i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55321337 44 + 59248254 acacagagagagagagagagagacaa--------------agagagagagagat--------agag i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47419532 36 + 51301725 --------acagagagagagagataa--------------agagagagagagac--------agag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47118051 44 + 50890351 acagagagaaagagagagagagacaa--------------agagagagagagag--------agag i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19800371 56 - 122678785 --ggagaaagtgggagaTTCAGTCAACAAACCTTTTTCTGAAGGGGAGTGACAG--------GGAG i canFam3.chr1 C 0 I 131 e rheMac3.chr19 60222658 7 + 64156825 I a score=40881.000000 s hg38.chr19_GL949747v2_alt 392179 42 + 729520 ag--agacaaagagagac--------agagagagagagagaaacagagagag s panTro4.chr19 59334561 50 + 63644993 ag--agacaaagagagacagacaaagagagagagagagagaaacagagagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56227529 32 + 60714840 ------------agagac--------agagagagagagagagacaaagagag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102951850 32 - 106955855 ------------agagac--------aaagagagagagagagagagaaagag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55321381 40 + 59248254 ag--agagacagagagat--------agagagagagagac--acagagagag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47419568 42 + 51301725 agatagagagatagagac--------agacagagagagag--acagagagag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47118095 42 + 50890351 at--aaaaagagagagac--------agacagagagagagaaacagagagag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19800427 131 - 122678785 I e rheMac3.chr19 60222658 7 + 64156825 I a score=13529.000000 s hg38.chr19_GL949747v2_alt 392221 18 + 729520 agagacaaagagagagag s panTro4.chr19 59334611 18 + 63644993 agagacaaagagagagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56227561 18 + 60714840 agagacagagaaacagag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102951882 12 - 106955855 agagacaaagaa------ i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47419610 18 + 51301725 agagacacacagagagag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47118137 16 + 50890351 --agacacagagagagag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19800427 131 - 122678785 I e macFas5.chr19 55321421 0 + 59248254 C e rheMac3.chr19 60222658 7 + 64156825 I a score=44888.000000 s hg38.chr19_GL949747v2_alt 392239 113 + 729520 agacaaagacagagagagacag--agagagacaaagagagagacagagagagaaagag----------agacagagagagac--------agagagagagacagagacaa----agagatagagagagaaagagaga s panTro4.chr19 59334629 135 + 63644993 agacaaagacagagagagacag--agagagacaaagagagagacagagagagaaagagagagagacaaagagagagagagacaaagacagagagagacagagagagacaaagagagagacagagagagaaagagaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56227579 81 + 60714840 ----aaagagagtgagagacag--agagagacaaagagagag--agacagagaaagag--------------------------------------------ggagacaa----agagagagagacagagaaagagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102951894 75 - 106955855 --------------agagacagcaagagagacagagagagagacagagagagagaaag--------------------------------------------agagacaa----agagagagagacagagagacaga i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47118153 113 + 50890351 agacaaagagag--agagagag--agagataaaaagagagagacagacagagagagag--------aaacagagagagagac--------acagagagagagagagacaa----agagagagagagagagagagaga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19800427 131 - 122678785 I e papAnu2.chr19 47419628 0 + 51301725 C e macFas5.chr19 55321421 0 + 59248254 C e rheMac3.chr19 60222658 7 + 64156825 I a score=14398.000000 s hg38.chr19_GL949747v2_alt 392352 43 + 729520 gagacagagagagagagacaaagacagagacagagaaacaaag s panTro4.chr19 59334764 43 + 63644993 gagacaaagagagagagacagagagacagagagagagacaaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56227660 39 + 60714840 gagacaaagagagagagacagag----aaagagggagacaaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102951969 41 - 106955855 gagagaaacaaagagagatagag--acagagacagaaacaaag i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19800427 131 - 122678785 I e chlSab2.chr6 47118266 0 + 50890351 C e papAnu2.chr19 47419628 0 + 51301725 C e macFas5.chr19 55321421 0 + 59248254 C e rheMac3.chr19 60222658 7 + 64156825 I a score=24866.000000 s hg38.chr19_GL949747v2_alt 392395 50 + 729520 ag----------------------agagagagagacagagag--------agacagagagagacagag----------------------------agagagagagac s panTro4.chr19 59334807 108 + 63644993 agatagagaaagagagagagacaaagagagagagacagagagagagacaaagacagagagagacagagagacaaagagagagagaaagagagacaaagagagagagac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56227699 58 + 60714840 ag----------------------agagtgagagacagagagagaggtaaagagagagagagagaaag----------------------------agagagagacaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102952010 56 - 106955855 ------------------------agagagagagacagagagagaaacaaagagagagagaaacagag----------------------------agagtgagagac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60222665 50 + 64156825 ag----------------------agagagagagacaaagagag------agagagagagagagagag----------------------------agacagagag-- i rheMac3.chr19 I 7 C 0 e canFam3.chr1 19800427 131 - 122678785 I e chlSab2.chr6 47118266 0 + 50890351 C e papAnu2.chr19 47419628 0 + 51301725 C e macFas5.chr19 55321421 0 + 59248254 C a score=5036.000000 s hg38.chr19_GL949747v2_alt 392445 16 + 729520 agagagagtgaga------------------gag s panTro4.chr19 59334915 34 + 63644993 agagagagagacagagagagacagagagagtgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56227757 16 + 60714840 agagagagagaca------------------gag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102952066 8 - 106955855 a--------gaca------------------gag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60222715 16 + 64156825 atagagagagaga------------------gac i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47419628 16 + 51301725 aaagagacagaga------------------gag i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19800427 131 - 122678785 I e chlSab2.chr6 47118266 0 + 50890351 C e macFas5.chr19 55321421 0 + 59248254 C a score=21927.000000 s hg38.chr19_GL949747v2_alt 392461 13 + 729520 agagagagagagT s panTro4.chr19 59334949 13 + 63644993 agagagagagagT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56227773 13 + 60714840 agagagagagaCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102952074 13 - 106955855 agagagagagagT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60222731 13 + 64156825 acagagagagaCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55321421 13 + 59248254 agagagagagaCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47419644 13 + 51301725 agagagagagact i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19800427 131 - 122678785 I e chlSab2.chr6 47118266 0 + 50890351 C a score=605335.000000 s hg38.chr19_GL949747v2_alt 392474 301 + 729520 CCATCAATTTAAAGTC-TTTTTCTAGGGGAATGAAGGGGAATGGCATATGTGGTGACTATGGGgtgt----gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtATTTCATGTAAGAAAGCAGCATGCTGAGGACACAGCAGCAAGAACAAAGCAATGAGCTCCCCCTGGAAGCCAATATAACTTACTTCTACTTAGTAACATTTACCCCttttcttttttaagacagag--tctcactctgtcgcccaggctggagtacagtggcacaatctcagctcaccgcaacctctgcctcccagg s panTro4.chr19 59334962 285 + 63644993 CCATCAATTTAAAGTC-TTTTTCTAGGGGAATGAAGGGGAATGGCGTATGTGGTGACTATGGG--------------------GGgtgtgcgtgtgtgtgtgtgtatgtgtATTTCATGTAAGAAAGCAGCATGCTGAGGACACAGCAGCAAGAACAAAGCAATGAGCTACCCCTGGAAGCCAATATAACTTACTTCTACTTAGTAACATTTACCCCttttcttttttaagacagag--tctcactctgtcgcccaggctggagtacagtggcacaatctcagctcaccgcaacctctgcctcccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56227786 294 + 60714840 CCATCAA-TTAAAGTC-TTCTTCTAGTGGAATGAAGGAGAATGGCGTATGTGGCGACTATGGG----------GGgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTTCATGTAAGAAAGCAGCATGCTGGGGACACGGCAGCAAGAACAAAGCAATAAGCTCCCCATGGAAGCCAATATAACTTACTTCTACTTAGTAACAGTTACCCCttttcttttttaagacagag--tctcactctgtcacccaggctggagtacagtggcacgatctcagctcactgcaacttctgcctcccagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102952087 306 - 106955855 CCATCAATTTAAAGTCTTTTTTCTAGGGGAATGAAGGGGAATGGTGTATGTGGTGACTATGGGgtgtgtgcgtgcgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTTCATGTAAGAAAGCAGCATGCTGGGGACTTAGCAGCAAGAACAAAGCAATGAGCTCCCCCTGGAAGCCAATATAACTTACTTCTACTTAGTAACAGTTACCCCttttcttttttaagacagag--tctcactctgtcacccaggctggagtacagtggcacaatctcagctcactgcaacctctgcctcccagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60222744 265 + 64156825 CCATCAATTTAAAGTT-TTTTTCT----------AGGGGAATAGCATATGTGGTGACTATGGGg------------------------------tgtgtgtgtgtgtgtgtgtTTCATGTAAGAAAGCAGCATGCTGCGGACATAGCAGTAAGAACAAAGCAATGAGCTCTCCCTGCAAGCTAATATAACTTACTTCTACTTAGTAACAGTTATCCCttttcttttttaagacagag--tctcactctgtcacccaggctggagtacagtagcgcaatctcagctcactgcaacctctgcctcccagg i rheMac3.chr19 C 0 M 968 s macFas5.chr19 55321434 267 + 59248254 CTATCAATTTAAAGTT-TTTTTCT----------AGGGGAATAGCATATGTGGTGACTATGGGg----------------------------tatgtgtgtgtgtgtgtgtgtTTCATGTAAGAAAGCAGCATGCTGCGGACATAGCAGTAAGAACAAAGCAATGAGCTCTCCCTGGAAGCTAATATAACTTACTTCTACTTAGTAACAGTTATCCCttttcttttttaagacagag--tctcactctgtcacccaggctggagtacagtagcgcaatctcagctcactgcaacctctgcctcccagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47419657 259 + 51301725 ccatcaatttaaagtt-tttttct----------aggGGAATAGCATATGTGGTGActatggga------------------------------------tgtgtgtgtgtatttcatgtAAGAAAGCAGCATGCTGCGGACATAGCAGTAAGAACAAAGCAATGAGCTTTCCCTGGAAGCTAATATAACTTACTTCTACTTAGTAACAGTtaccccttttcttttttaagacagag--tctcactctgtcacccaggctggagtacagtagcgcaatttcagctcactgcaacctccgcctcttggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47118266 263 + 50890351 CCATCAATTTAAAGTT-TTTTTCT----------AGGGGAATAGCATATGTGGTGACTATGGGG----------------------------------TGTGTGTGTGTGTGTTTCATGTAAGAAAGCAGCATGCTGTGGACATAGCAGTAAGAACAAAGCAATGAGCTCTCCCTGGAAGCTAATATAACTTACTTCTACTTAGTAACAGTTATCCCttttcttttttaagacagagtctctcactctgtcgcccaggctggagtacagtagcgcaatctcagctcactgcaacctctgcctcccagg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19800427 131 - 122678785 I a score=1168683.000000 s hg38.chr19_GL949747v2_alt 392775 686 + 729520 ttcaagctattctcatgccttggcctcctgagtacctgggattacaggcacacattgccatgtccagataatttttttgtatttttagtagagacagggta-------tttttttttttttttgagacagagtcttgctctgtcacccaggccggagtgcaatgacacaatctcggctcactgcaacctctgcctcccaggttcaagcaattctcctgtctcagcctcccgagtagctgtgactatgggagtgtgccatcacatccagctaatttttgtatttttactagagatggggcttcaccatgttggccaggctggtctcgaactcctgacctc--gtgatccgcccgccttggcctcccaaagtgctgggattacaggcatgagccaccatgcctggccTGtttgtttatttttttgagttggagtcgtgctctgttgtccaggctggagagcagtggcacaatctcagttcactgcaacctccgcctcctggattcaagcaattctcttgcctcagcctcccaagtagctgggattacaggcacacaccaccatgccaggctaa-tttttttgtatttttagtagagacaaggtttcgccatgttggccagactggtctcgaattcctgacctcaggtgatccactggcctcggcctcccaaagtgctggaattacaggcgtgagccac s panTro4.chr19 59335247 684 + 63644993 ttcaagctattctcatgccttggcctcctgagtagctgggattacaggcacacattgccatgtccagataatatttttgtatttttagtagagacagggta---------tttttttttttttgagacagagtcttgctctgtcacccaggccggagtgcaatgacacaatctcggctcactgcaacctctgcctcccaggttcaagcaattctcctgtctcagcctcccgagtagctgtgactatgggagtgtgccatcacacccagctaatttttgtatttttactggagatggggcttcaccatgttggccaggctggtctcgaactcctgacctc--gtgatccgcctgccttggcctcccaaagtgctgggattacaggcatgagccaccatgcctggccTGtttgtttatttttttgagttggagtcgtgctctgttgtccaggctggagagcagtggcacaatctcagttcactgcaacctccacctcctggattcaagcaattctcttgtctcagcctcccaagtagctgggattacaggcacacaccaccatgccaggctaa-tttttttgcatttttagtagagacgaggtttcgccatgttggccagactggtctcgaattcctgacctcaggtgatccactggcctcggcctcccaaagtgctggaattacaggcgtgagccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56228080 689 + 60714840 ttcaagctattctcgtgtcttggcctcctgagtagctggaattacaggcacacgtcgccatgtccagctaatttttttgtgtttttagtagaggaagggtAttttttttttttttttttttttgagacagagtcttgttctgtcacccaggccggagtgcaatgatgcaatctcggctcactgcaacccgcacctcccaggttcaagcaagtctcctgtctcagcctcctgagtagctgtgactacgggagcgtgccaccacgcctggctaatttttgtatttttactagagatggggtttcaccatgttggccaggctggtctcgaactcctaacctt--gtgatctgcccaccttggcctcccaaagtgctgggattacaggcatgaaccaccacgcccggccTGtttg-----ttttttgagatggagtcctgctctgtcgtccaggctggagagcagtggtgcaatcttggttcactgcaacctccgcctcctggattcaagcaattctcttgcctcagtctcccgagtagctgggattacaggcacacaccaccatgccaggctaattttttttgtatttttagtagagacgaggtttcaccatgttggccaggctggtctcaaattcctgacctcaggtgatccactggccttggcctcccaaaatgctgggattacaggcatgagccac i ponAbe2.chr19 C 0 I 153 s nomLeu3.chr10 102952393 688 - 106955855 ttcaagctattctcatgccttggcctcctgagtagctgggattacaggcacatgtcgtcatgtccagttattttttttgtatttttagtagagacggggta-----tttttttttttttttttgaggcagagtcttgctctgtcacccaggccagagtgcaatgacacaatctcggctcactgcaacctccgcctcccaggttcaagcaattctcctgtctcagcctcccgagtagctgtgactatgggagcgtgctaccacgcccagctaatttttgtattttcagtagagacggggtttcaccatgttggccaggctggtctcaaact-ctgacctcaggtgatctgcccaccgtggcctcccaaagtgctgggattacaggcatgagccaccacacctggccTGTTTGTGTG-ttttttgagacggagtcccactctgtcatccaggctggagagcagtggcgcaatcttggttcactgcaacctctgcctcctggattcaagcaattctcttgcctcagcctcctgagtagctgggattacaggcacacaccaccatgccaggctaa-tttttttgtatttttagtagagacgaggttttgccaagttggccaggctggtctcaaattcctgacctcaggtgatccactggcctcggcctcccaaaatgctaggattacaggcgtgagccac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55321701 685 + 59248254 ttcaagctattctcatgccttggcctcctgagtagctgggattacaggcacacgtcaccatgtccagctaacttttttgtacttttagtagagacagggtg--tttgtttgtttgtttgttttgagacagagtcttgctctgtcacccaggccagagtgcaatgacgcaatctcggctcactgcaacctccgcctcccaggttcgagcaattctcctgtctcagcctcccgagtagctggcactacgggcgcgtgccaccacg-ccgactaatttttgtatttttagtagagatggggtttcaccatatcggccaggctggtctcgaactcctgacctcaagtgatccacccaccttggcctttcaaagtgctgggattacaggtatgagccaccacgcccagccTGtttgttta-ttttttgaaatggagtcccactctgtcattcaggctggagagcagtggtgcaatcttggttcactgcaacctccacctcctggattcaagcaattctcttgcctcagcctcccgagtagctgggattacaggcacacaccaccatgccaagctaa-tttttttgtatgtttagtagagatggggttttgccatgttggccaggctggcctcaaattcctgacctcaggtgatccactggcctcggcccccgga------gggattacaggtgtgagccac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47419916 690 + 51301725 ttcaagctattctcatgccttggcctcctgagtagctgggattacaggcacatgtcaccatgtccagctaa-ttttttgtactgttagtagagacagggtg--tttgtttgtttgtttgttttgagacagagtcttgctctgtgacccaggccagagtgcaatgacgcaatctcggctcactgcaacctctgcctcccaggttcgagcaattctcctgtctcagcctcccgagtagctggcactacgggcgtgtgccaccacg-ccgactaatttttgtatttttagtagagatggagtttcaccatatcggccaggctggtctcgaactcctgacctcaagtgatccacccaccttggcctttcaaagtgctgggattacaggtatgagccaccacgcccagcttgtttgtttg-ttttttgaaatggagtcccactctgtcgttcaggctggagagcagtggtgcaatctcggttcgctgcaacctccacctcctggattcaagcaattctcttgcctcagcctcccgagtagctgggattacaggcacacaccaccatgccgggctaa-tttttttgtatgtttagtagagacggggtttcgccatgttggccaggctggcctcaaattcctgacctcaggtgatccactggcctcggcctcccaaagtgctgggattacaggtgtgagccac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47118529 683 + 50890351 ttcgagctattctcatgccttggcctcctgagtagctgggattacaggtacacgtcaccatgtccagctaatttttttgtacttttagtagagacaggg------tgtttgtttgtttgttttgagacagagtcttgctctgtcacccaggccagagtgcaatgacgcaatctcggctcactgcaacctccgcctcccaggttcgagcaattctcctgtctcagcctcccgagtagctggcactatgggcgagtgcccccacg-cggactaatttttgtatttttagtagagatggggtttcaccatatcggccagactggtctcgaactcctgacctcaagtgatccacccaccttggcctttcaaagtgctgggattacaggtatgagccaccacgcccagcttgtttg-----ttttttgaaatggagtcccactctgtcgttcaggctagagagcagtggtgcaatctcggttcactgcaacctccacctcctggattcaagcaattctcttgcctcagtctcctgagtagctgggattacaggcacacaccaccatgccaggctaa-tttttttgtatgtttagtagagatggggtttcaccatgttggccaggctggcctcaaattcctgacctcaagtgatccactggcctcggcctcccaaagtgctgggattacaggtgtgagccac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19800427 131 - 122678785 I e rheMac3.chr19 60223009 968 + 64156825 M a score=44750.000000 s hg38.chr19_GL949747v2_alt 393461 34 + 729520 tgggcctggccgagacagggttttaccatgttgg s panTro4.chr19 59335931 34 + 63644993 cgggcctggccgagacagggttttaccatgttgg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102953081 34 - 106955855 caggcttggccgagacagggttttaccacgttgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55322386 34 + 59248254 cgggctcggccgagacagggttttaccatgttgg i macFas5.chr19 C 0 I 316 s papAnu2.chr19 47420606 34 + 51301725 tgggctcggccgagacagggttttaccatgttgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47119212 34 + 50890351 cgggctcggccgagacagggttttaccatgttgg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19800427 131 - 122678785 I e ponAbe2.chr19 56228769 153 + 60714840 I e rheMac3.chr19 60223009 968 + 64156825 M a score=89364.000000 s hg38.chr19_GL949747v2_alt 393495 47 + 729520 ccaagctggtctcgaactcctgacctcaagtgatctgcccacctcca s panTro4.chr19 59335965 47 + 63644993 ccaagttggtctcgaactcctgacctcaagtgatctgcccacctcca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102953115 47 - 106955855 ccaagctggtctcgaactcctgacctcaagtgatctgcccacctctg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60223985 47 + 64156825 ccaagctggtcttgaactcctgacctcaagtgatctacccacctcca i rheMac3.chr19 M 968 C 0 s macFas5.chr19 55322736 47 + 59248254 ccaagctggtcttgaactcctgacctcaagtgatctacccacctcca i macFas5.chr19 I 316 C 0 s papAnu2.chr19 47420640 47 + 51301725 ccaagctggtcttgaactcctgacctcaagtgatctacccacctcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47119246 47 + 50890351 ccaagctggtcttgaactcctgacctcaagtgatctacccacctcca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19800427 131 - 122678785 I e ponAbe2.chr19 56228769 153 + 60714840 I a score=111684.000000 s hg38.chr19_GL949747v2_alt 393542 49 + 729520 cctccccaagtgctgggattacaggctcgagccactgcgcctggccCCC s panTro4.chr19 59336012 49 + 63644993 cctccccaagtgctgggattacaggctcgagccactgcgcctggccCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56228922 49 + 60714840 cctccccaagtgctgggattacaggcttgagctactgcatctggccCCC i ponAbe2.chr19 I 153 C 0 s nomLeu3.chr10 102953162 49 - 106955855 cctccccaagtgctgggataacaggcttgagccactgcgcctggccCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60224032 49 + 64156825 cctttccaggtgctgagattacaggcttgagccaccacgcctggccCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55322783 49 + 59248254 cctttccaggtgctgagattacaggcttgagccaccacgcctggccCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47420687 49 + 51301725 CCTTTccaggtgctgagattacaggcttgagccactgcgcccagccccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47119293 49 + 50890351 cctttccaggtgctgagattacaggctcgagccaccgcacccagccCCC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19800427 131 - 122678785 I a score=1268272.000000 s hg38.chr19_GL949747v2_alt 393591 504 + 729520 AGTTACCCCTTTTCTAACACCAACCCAGATTGTTCTCTGCAATTCAGGATTCAtg-tttctcaggtggcaatccaagatccattagccagccacaaaacaatttagaaggttgtgaccagatttgaa-ttacaaaatagaagtaacagaggatagaaattatccaagagcattgcacatagt---ggtca-----------gaaactttttacttttttttttttt------tttttttttgtgtgtgtgtgtgtatactagatcataatgtaaaatgtatttctcactgtgggttgtggccctatcagttggaaa-ccactCATCTAGAATATTATCCATATGGA-GAGGGCTGATGCAGGGCCAAATGATGGAGGGTATAAACTCAGGGCT--GAGGGTGTGAC--------TTGATTCTATGGGCAACGTGGAGCCACTGAGCTCTATTGGGTTGCACAGTCACCACCAGCACCTCACTGTCCTGCACTCTGATGTACACATGCCCAACTGTGCACATCATGACGTTTGGAATTC s panTro4.chr19 59336061 497 + 63644993 AGTTACCCCTTTTCTAACACCAACCCAGATTGTTCTCTGCAATTCAGGATTCAtg-tttctcaggtggcaatccaagatccattagccagccacaaaacaatttagaaggttgtgaccagatttgaa-ttacaaaatagaagtaacagaggatagaaattatccaagagcattgcacatagt---ggtca-----------gaaactttttac-------ttcgtg------tgtgtgtgtgtgtgtgtgtgtatatactagatcataatgtaaaatgtatttctcactgtgggttgcagccctatcagttggaaa-ccactCATCTAGAATATTATCCATATGGA-GAGGGCTGATGCAGGGCCAAATGATGGAGGGTATAAACTCAGGGCT--GAGGGTGTGAC--------TTGATTCTATGGGCAACATGGAGCCACTGAGCTCTATTGGGTTGCACAGTCACCACCAGCACCTCACTGTCCTGCACTCTGATGTACACATGCCCAACTGTGCACATCATGACATTTGGAATTC i panTro4.chr19 C 0 N 0 s ponAbe2.chr19 56228971 486 + 60714840 AGTACCCCTTTCTATA----CCACCCAGATTGTCCTCTGCAATTCAGGGTTCATGTtttttcaggtggcaatccaagatccattagccagccacaaaacaatttagaaggttgtgaccagatttgta-ttataaaatagaagtaacagaggatagaaattatccgaaagcattgcacatagt---ggtca-----------gaaactttttac---------------------ttcgtgtgtgtgtgtgtgtgtatactagatcataatgtaaaatgtatttctcactgtgggttgtggccctataagttggaaa-ccactCATCTAGAATATTATCCATATGGA-GAGGGCTGATGCAGGGCCAAATGATGGAGGGTATAAACTCAGGGCT--GAGGGTGTGAC--------TTGATTCTATGGGCAACGTGGAGCCACCGAGCTCTATTGGGTTGCAGAGTCACCACCAGCACCTCACTGTCCTGCACTCTGATGTACACAGGCCCAACTGTGCACATCATGACATTTGGAATTC i ponAbe2.chr19 C 0 N 0 s nomLeu3.chr10 102953211 495 - 106955855 ACTTAACCATTTTCTAACACCAACCCAGATTGTTCTCTACAATTCAGGATTCAtg-tttctcaggtggcaatccaagatccattagccagccacaaaacaatttagaaggttgtgaccacatttgta-ttataaaatagaagtaacagaggatagaaattatccaagagcattgcacatagt---ggtca-----------gaaactttttac-------ttcgtg--------tgtgtgtgtgtgtgtgtgtgtatactacatcataatgtacaatgtatttctcactgtgggttgtggccctataagttggaaa-ccactAATCTAGAATATTATCCATATGGA-GAGGGCTGATGCAGGGCCAAATGATGGAGGGCATAAACTCAGGGCT--GAGGGTGTGAC--------TTGATTCTATGGGCAACGTGGAGCCACTGAGTTCTATTGGGTTGCAGAGCCACCACCAGCACCTCACTGTCCTGCACTCTGAGGTACACATGCCCAATTGTGCACATCATGACGTTTGGAATTC i nomLeu3.chr10 C 0 N 0 s rheMac3.chr19 60224081 492 + 64156825 AGTTACCCCTTTTCTAACACCAACCCAGATTGTTCTCTGCAATTTGGGGTTCATG-TTTCTCAGGTGGCAATCCAACATCCATCAGC-----------caatttagaaggttgtgaccagatttgtg-ttataaaatagaagtaacagaggatagaaattatccaagagcattgcacatagt---ggtca-----------gaaactttttac-------ttggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatactagatcataacgtaaaatgtatttctcactgtgggttgtggctctataaattggaaa-ccactAATCTAGAATATTATCCTTACGGA-AAGGGCTGATGCAGGGCCAAACGATGGAGGGCATAAACTTAGGGCT--GAGGGTGTGAT--------TTGATTCTCTGGGCAATGTGAAGCCACTGAACTCTATTGGGTTGCAGAGTTACCACCAGCACCTCACTGTCCTGCACTCTGATGTACACACGCCCAAATGTGCACATCATGACATTTGGAATTC i rheMac3.chr19 C 0 N 0 s macFas5.chr19 55322832 490 + 59248254 AGTTACCCCTTTTCTAACACCAACCCAGATTGTTCTCTGCAATTTGGGGTTCATG-TTTCTCAGGTGGCAATCCAACATCCATCAGC-----------CAATTTAGAAGGTTGTGACCAGATTTGTG-TTATAAAATAGAAGTAACAGAGGATAGAAATTATCCAAGACCATTGCACATAGT---GGTCT-----------GAAACTTTTTAC-------TTCgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg--tactagatcataacgtaaaatgtatttctcactgtgggttgtggctctataaattggaaa-ccactAATCTAGAATATTATTCTTACGGA-AAGGGCTGATGCAGGGCCAAACGATGGAGGGCATAAACTTAGGGCT--GAGGGTGTGAT--------TTGATTCTCTGGGCAATATGAAGCCACTGAACTCTATTGGGTTGCAGAGTTACCACCAGCACCTCACTGTCCTGCACTCTGATGTACACACGCCCAAATGTGCACATCATGACATTTGGAATTC i macFas5.chr19 C 0 N 0 s papAnu2.chr19 47420736 503 + 51301725 agtTACCCCTTTTCTAACACCAACCCAGATTGTTCTCTGCAATTTGGGGTTCATG-TTTCTCAGGTGGCAATCCAACATCCATCAGCCAGCCACAAAACAATTTAGAAGGTTGTGACCAGATTTGTA-TTATAAAATAGAAGTAACAGAGGATAGAAATTATCCAAGAGCACTGCACATAGT---GGTCA-----------GAAACTTTttac-------ttcgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtatactagatcataacataaaatgtatttctcactgtGGGTTGTGGCCCCATAAATTGGAAA-CCACTAATCTAGAATATTATCCTTATGGA-AAGGGCTGATGCAGGGCCAAACGATGAAGGGCATAAACTTAGGGCT--GAGGGTATGAT--------TTGATTCTCTGGGCAATATGAAGCCACTGAACTCTATTGGGTTGCAGAGTCACCACCAGCACCTCACTGTCCTGCACTCTGATGTACACACGCCCAACTGTGCACATCATGACATTTGGAATTC i papAnu2.chr19 C 0 N 0 s chlSab2.chr6 47119342 503 + 50890351 AGTGACCCCTTTTCTAACACCAACCCAGATTGTTCTCTGCAATTTGGGGTTCAtg-tttctcaggtggcaatccaacatccatcagccagccacaaaacaatttagaaggttgtgaccagatttgta-ttataaaatagaagtaacagaggatagaaattatccaagagcattgcatatagt---ggtga-----------gaaactttttac-------ttcgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtatactagatcataacgtaaaatgtatttctcactgtgggttgtggccccataaattggaaa-ccactAATCTAGAATATTATCCTTATGGA-AAGGGCTGATGCAGGGCCAAACGATGGAGGGCATAAACTTAGGGCT--GAGGGTGTGAT--------TTGATTCTCTGGGCAATATGAATCCACTGAACTCTATTGGGTTGCAGAGTCACCACCAGCACCTCACTGTCCTGCACTCTGAGGTACACACGCCCAAATGTGCACATCATGACATTTGGAATTC i chlSab2.chr6 C 0 N 0 s canFam3.chr1 19800558 488 - 122678785 AGTTACTCCTTTTCTAACACCAACCCAGATTGTTCTCTGGAATTCAAGATTagtg-tttttcagattgcaggtcaagacccattagccagtcatgaaa-aattt---aggttgtgaccagatttttatttctgaaatagaatta------gatgggagagatctgagagcatcgtgctgagtggaggtcagttttgttcgtgagacttttcac-------ttctga----------------------catgtgtgtgccagatcacactgtaaaatgtatttctcagtgt-ggttgaggttccacaggttggaaatctactACCCTTAAA---TATCTATATTGAGGAGGGTGGACATAAGGCCAGATGGTGGAAGACATGAAAGCAAGACTAAGAGGGTTTGTTTGACCTGATCGATCCCATGGGCAATG-GGAGCCACTGAGTACTCTTGAGTCACTGAGTCACAATGACCACCTCA--GCC---CACCCATAGATACATGAGCCTAACTACACACATTATGGAATTTGGAATTC i canFam3.chr1 I 131 I 91799 a score=0.000000 s hg38.chr19_GL949747v2_alt 394095 5000 + 729520 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN e canFam3.chr1 19801046 91799 - 122678785 I a score=5980.000000 s hg38.chr19_GL949747v2_alt 399095 15 + 729520 GAATTCCAATCATGA s ponAbe2.chr19 56642148 15 + 60714840 GAATTCCAATCATCA i ponAbe2.chr19 N 0 C 0 s rheMac3.chrUn_JH290802 6077 15 + 40826 GAATGCCAACCATCA i rheMac3.chrUn_JH290802 N 0 C 0 s papAnu2.chr19 47703448 15 + 51301725 GAATACCAACCATCG i papAnu2.chr19 N 0 C 0 e canFam3.chr1 19801046 91799 - 122678785 I a score=16046.000000 s hg38.chr19_GL949747v2_alt 399110 23 + 729520 TTTTTCTATTTCTCTATAATTac s panTro4.chr19 59652045 23 + 63644993 TTTTTCTATTTCTCTGTATTTAA i panTro4.chr19 N 0 C 0 s ponAbe2.chr19 56642163 23 + 60714840 TTTTTCTATTTCTCTATAATTAC i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 6092 23 + 40826 TTTTTCTACTTCTCTGTCTTTAA i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47703463 23 + 51301725 TTTTTCTACTTCTCTGTCTTTAA i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19801046 91799 - 122678785 I a score=492152.000000 s hg38.chr19_GL949747v2_alt 399133 440 + 729520 ttctttgatcctttatcttatccattaggcaatgagcctaaaacctcttccctatttggctttctgtgagcatgagatcatatagaaaatgtgaaagcccgctgaatcctccagcacagatcctggaatagagaaagtgctcTGGTCATCACAAAAAAAACTTGCCCACTCACCCAAATCCCCCACCTCACCCCTACTTCCAATCACCTGTGGAGATTCAGATAGACCATGGGGAGGTAAACATTAACACTCCTTGGAGTGAGTCCAGATCTTGGAATCAGAGATCAGCGACAGCACTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTTTTGAAGCAATAGATGGCCGAGGGGGTGGTCCTTCCCCCAGCCTCTCGGGTAGAACAGCAGCCTAATATGTGTCTCCCGAGATCACAAAGAGCAGCA s panTro4.chr19 59652068 438 + 63644993 TTCTTTGACCCTTTATCTTATCCATTAAACAATCAGGCTAAAACCTCTTCCTTATTTGGCTTTCTGTGAGCTTGAGATCATATGGAAAATGTGAAAGCCTCCTGCACCCACCAGCACAGGTCCTGGAATAGAACACGTGCTCTGTTCATGGCATAAAA--CTTGCCCCTTCACCCAAATCCCCCAATTCATCTCTACTTCCAATCACCTATGGAGATACAGATAGATCTTGGGGAGGTAAACACTAATACTCTTTGGAGTGAGCTCAGATCTTGGACTCAGAGACCAGTGCCAGCACTAGCCCCTGGTCACATTTCGTACTAACTCACAGAAGGACAGGCTGTATTGAAACAATAAACGACGGAGAGGGCGGTCCTTCCCCGTGCTTCCCGGGTGGAATAGCAGCCTAATATATGTCTCAGGAGATCACAAAAAGTAGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56642186 440 + 60714840 TTCTTTGATCCTTTATCTTATCCATTAGGCAATCACCCTAAAACCTCTTCCCTATTTGGTTTTCTGTGAGCATGAGATCATATAGAAAATGTGAAAGCCCGCTGAATCCTCCGGCACAGATCCTGGAATAGAGAAAGTGCTCTGTTCATAGCAAAAAAAAATTGTGCTCTCACCCAAACCCCCCACCTCAGCCCTACTTCCAATCACCTGTGGAGATTCAGATAGACCATGGGGAGGTAAACATTAATACTCCTTGGAGTGAGTCCAGATCTTGAAATCAGAGATCAGCGCCAGCACTAGCTCCTGCTCCCCTTTCATACTAATTCACAGGAGGACAGGTGGTATTGAAGCAGTAGATGGTGGAGGGGGCGGTCCTTCCCCCAGCCTCTCGGGTGGAACAGCAGCCTAACATGTGTCTCCTGAGATCACAAAGAGTAGCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 6115 437 + 40826 TTCTTTGACCCTTTACCTTATCCATTAAACAATCAGGCTAAAACCTCTTCCTTATTTGGCTTTCTGTGAGTTTGAGATCATACAGAAAATGTGGAAGCCCCCTGAACCCACCAACGCAGGCCCTGGAATAGAGAATGTGCTCTGTTCATGGTATAAAA--CTTGCCCTGTCACTCAAATCCCCCACCCTACTCCTACTTCCAATCACCTGTGGAGATTCAGATAGATCATGGGGAGATAAAAACCAATACTCTTTGGAGTGAGCTCAGATCTTGGACTCAGAGACCAGCGCCAGCACTATCTCCTGGTCACATTTCGTACTAACTCACAGAAGAACAGGCTGTATTGAAACAATAGATGATGGAGGTGGTTGTGCTTCCCACTGCCTCTCAGGTAGAACAACAGCTTAATA-ATGTCTCAGGAGATCACAAAAAGTAGCA i rheMac3.chrUn_JH290802 C 0 I 30279 s papAnu2.chr19 47703486 438 + 51301725 TTCTTTGACCCTTTATCTTATCCATTAAACAATCAGGCTAAAACCTCTTCCTTATTTGGCTTTCTGTGAGCTTGAGATCATATGGAAAATGTGGAAGCCCCCTGAACCCACCAACGCAGGCCCTGGAATAGAGAATGTGCTCTGTTCATGGTATAAAA--CTTGTCCTCTCACCCAAATCCCCTACCTGACTCCTACTTCCAAGCACCTGTGGAGATACAGATAGATCATGGGAAGGTAAAAACTAATACTCTTTGGAGTGAGCTCAGATCTTGGACTCAGAGACCAGCGCCAGCACTATCTCCTGGTCACATTTCGTACTAACTCACAGAAGAACAGGGTGTATTGAAACAATAGATGATGGAGGTGGTTGTGCTTCCCCCGGACTCTCAGGTAGAACAACAGCTTAATATGTGTCTCAGGAGATCACAAAAAGTAGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47384223 438 + 50890351 TTCTTTGACCCTTTATCTTATCCATTAAACAATCAGGCTAAAACCTCTTTCTTATTTGGCTTTCTGTGAGCTTGAGATCATACGGAAAATGTGGAAGCCCCTTGAACCCACCAACGCAGGCTCTGGAATAGAGAATGTGCTCTGTTCATGGTATAAAA--CTTGCCCTGTCACCCAAATCCCCCACCTCACTCCTACTTCCAATCACCTGTGGAGATACAGATAGATCATGGGGAGATAAAAACCAATACTCTTTGGAGTGAGCTCAGATCTTGGACTCAGAGACCAGTGCTAGCACTATCTCCTGATCACATTTCGTACTAACTCACAGAAGAACAGGGTGTATTGAAACAATAGATGATGGAGGTGGTTGTGCTTCCCCCGGACTCTTAGGTAGAACAACAGCTTAATATGTGTCTCGGGAGATCACAAAAAGTAGCA i chlSab2.chr6 N 0 C 0 e canFam3.chr1 19801046 91799 - 122678785 I a score=59128.000000 s hg38.chr19_GL949747v2_alt 399573 68 + 729520 GGTTTCACACGGGCTTCAACACTATTTCCTGGCCGTTTGACATAAGAGAATTCTATTTCGCTTTTTTT s panTro4.chr19 59652506 68 + 63644993 TGTTGTTCCTGGGCTACATCATTATTTCATGGCTGTTTGATTTAAGTCAGTTCTACTTCACTTTTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56642626 68 + 60714840 CGTTTCACACGGGCTTCAACACTATATCCTGGCTGTTTGACATAAGAGAATTCTACTTCGCTTTTTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 36831 68 + 40826 CGTTCTTCACGACCTTCATCATTATTTCCTGGCTGTTTGATATATGACAGTTCTACTTCACTTTTTTG i rheMac3.chrUn_JH290802 I 30279 T 30278 s papAnu2.chr19 47703924 68 + 51301725 CATTGTTCCTGGGCTGCATCATTATTTCATGGCTGtttgatttaagtggggtttacttcacctttttt i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47384661 68 + 50890351 CGTTGCTCCTGGGCTGCATCATTATTTCATGGTTGTTTGATTTAAGTCAGGTTTACTTCACCTTTTTT i chlSab2.chr6 C 0 I 1 e canFam3.chr1 19801046 91799 - 122678785 I a score=93767.000000 s hg38.chr19_GL949747v2_alt 399641 87 + 729520 ATCTTGATTTCACTTTTGTTTTCTTTCCTTGGAGAATGCAAGTTGTTTGATTCAAGAATGCTGTGGATGTAGAAACCCTAAAGCACA s panTro4.chr19 59652574 87 + 63644993 ATCTTGATTTCATTTTTTCTTTCTTTTCTTGGAGAATGTAATTTTTTTGAGTCAAGAGGGTTGTGGAGGTAGAAACTGTAAAGCACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56642694 87 + 60714840 ATCTTGATTTCACGTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTCACTCAAGAATACTGTGGATGTAGAAATCCTAAAGCACA i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 6621 87 + 40826 ATCTTGATTTCACTTTTTATTTCATTTCTTGGAGAATGTAATTTTTTTGAGTCAAGAGGGTTGTGGCTGTAGAAACTGTAAAGCACA i rheMac3.chrUn_JH290802 T 30278 I 30276 s papAnu2.chr19 47703993 87 + 51301725 atcttgatttcactttttatttcttttcttggagaATGTAATGTGTTTGAGTCAAGAGGGTTGTGGCTGTAGAAATTGTAAAGCACA i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47384730 87 + 50890351 ATCTTGATTTCACTCTTTATTTCTTTTCTTGGAGAATGTAATTCTTTTGAGTCAAGAGGGTTGTGGCTGTAGAAATTGTAAAGCACA i chlSab2.chr6 I 1 C 0 e canFam3.chr1 19801046 91799 - 122678785 I a score=506153.000000 s hg38.chr19_GL949747v2_alt 399728 411 + 729520 TTCGCTGTGAATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGGactgcacctgggcctatgccaattcctatcactcaccgtcactccagggagacagaacacacagagaatacgttacat-aggcaggttcattactaacagataagcagcgagtgacaacagaaacctatatttcaatgtgacccagtccctcaaggctcagaaaagctgctcgggacatatggagtcaccccatttgcagtgtagctgggggaagccagaaagcagcccagcctgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacgtcctcc---aggaagaacaggaagacagcccagggtgttctgagacgttcctcctgatctcaggaagttg s panTro4.chr19 59652661 414 + 63644993 TTCACCGTGTTTCAATCCCAGTGCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGGactgcacctgggcctatgccaattcctatcactcaccgtcactctagggagacagaacacacagagaatacgttacac-aggcaggttcattactaacagataagcagcgagtgacaacagaaacctacatttcaatgtgagccagtccctcaaggctcagaaaagctgctcgagacatgtggagtcaccccatatgcagtgtatctgggggaactcaaaaagcagcccagcctgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacgtcctcctccaggaagaacaggaagacagcccaggctgttctgggacattcctcctgatctcaggacgttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56642781 414 + 60714840 TTCGCTATATATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGTACTGCGCCTGGGCCTATGCCAATTCCTATCACTCACCGTCACTCAAGGgagacagaacacacagagaatacattacat-aggcaggttcattactaacagataagcagtgagtgacaagagaagcctacatttcaatgtgagccagtccctgaaggctcagaaaagctgctccggagatatggagtcatcccatttgcagggtagctgggggaagccagaaagcagcccagcctgggtgttctaccctggagccacaggaagcactcagctaaagcactgcatgacatcctcctctaggaaaaacaggaagacagcccaggctcttctgggacattcctcctgatctcaggatgttg i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 36984 412 + 40826 TTCACTGTGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTaaacacctcctgtactgcacctggggctatgccagtttctgtcactcactgtcactccagggaaacaaaacacacatagaatacattacataaggtgggttcattactaacacataagcagcaactgacaacagaagcctacatttcaatgtgagccagtcccccaaggctcagaaaagctgctcgggacatatggagtcaccccatttgcactgcagctgggggaacccagaaagcagcccagcctgggttttgtaccctggagccacaggaagcactgagctaaagcactgcatgacgtcctcctctgggaagaacaggaagacagcccaggctgttgtgggacgttcctcctgatctcaggatg--- i rheMac3.chrUn_JH290802 I 30276 T 30357 s papAnu2.chr19 47704080 412 + 51301725 TTCACTGAGTATCAATCCGAGTCCAGTCTTCCCAGAGAAGA--CTAAACACCTCCTGTACTGCACCTGGGGCTATGCCAGTTTCTATCCCTCACCGTCACTCCAGGGAGACAGAACACACAGAGAATACATGACAT-AGGCAGGTTCATTGCTAACAGATAACCAGCAAGTGACAACAGAAGCCTATATTTCAATGTGAGCCAGTCCCCCAAGGCTCAGAAAAGCTGCTCGGGACATATGGAGTCACCCCATTTGCACTGCAGCTGGGGGAACCCACAAAGCAGCCCGGCCTGGGTTTTGTACCCTGGAGCCACAGGAAGCACTGAGCTAAAGCACTGCATGACGTCCTCCTCTGGGAAGAACAGGAAGACAGCCCAGGCTGTTCTGGGACATTCCTCCTGATCTCAGGACGTTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47384817 414 + 50890351 TTCACTGTGCATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTaaacacctcctgtactgcacctggggctatgccagtttctgtcactcaccatcatttcagggagacagaacacacagagaatacatgacat-aggcaggttcattactaacagataaccagcaagtgacaacagaagcctatatttctatgtgagccagtcccccaaggctcagaaaagctgcttgggacatatggagtcaccccatttgcagtgcagctgggggaacccacaaagcagcccggcctgggttttgtaccctggagccacaggaaacactgagctaaagcactgcatgacgtcctcctctaggaagaataggaagacagcccaggctgttctgggacgttcctcctgatctcaggatgttg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19801046 91799 - 122678785 I a score=1387791.000000 s hg38.chr19_GL949747v2_alt 400139 1111 + 729520 ctgtcttaggccatttttgttgctctaaaggaacacttgagcctcggtaacttctaaagaaaagagattggtttgcctcaccgttctgcaggctgtactggaagcatggcaccagcatctatttctcgtgacggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgcagagaccacagagatcacacggcaagagagggagcaagggggagggggagtgatggagcttccaagctctttttaacaaccagctctccgggaactaatagagggggaacttgctaaccccgtctccttgggacagcattgatgtgttcatgatggatccacctccatgacccaaacacctctcaagaggcccaacctcccacagtgggggtgaaatttcaatgtgaggtttgaaggggtcaaacatctcaactaaagtagtcgtatcctcagcacgttctatggttactatgagagctataactgaaaaagcaggagaaagctgggtctcctgccatctgggtgcttgtcctAAAGAGGTGTTTTATGTGGTTACCTGTCAATCAAGAAATGCGAGACAATTCATAAAGAGGAACTGCTAAGATTAGCTTCTTATTGGTGTCTCATCTTCTTCCAGGTAACCCCCGACACCTGCACATTCTGATTGGGACCTCAGTGGtcatcatcctcttcatcctcctc---ttctttctcctTCATCGCTGGTGCTCCAACAAAAAAAGTAAGTCTCACGAAGCAGAGGCCAGAGAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCACTCAGGTGTGTGTTCCTCACAAACAGGATGGTCCCTGGCCCAAGGCAGCAGCCACAGAGGCAGGACTTTCTAGAGAGGGCACCAGACTCCCTGTCCCTGCCTTCAACTCACAGACCGTTGCCTGATTCTGAACTGTATCCTCATGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTT-GAGCTCAGAGAGATAGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGCCA s panTro4.chr19 59653075 1103 + 63644993 ctgtcttagtccatttttgttgctataaaagaacacttgagcc-gggtaacttctaaagaaa-gagattggtttgcctcaccgttctgcaggctgtactggaagcatggcaccagcatctatttcttgtgacggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgcagagaccacagagatcacacggcaagagagagagcaagggggagggggagcgatggagcttccaagctcttttgaacaaccagctctccaggaactaatagagggggaacttgctaaccccatctccttgggacagcattgatctgttcatgatggatccacctccatgacccaaacacctctcaagaggcccaacctcccaccctgggggttaaatttcaatgtgaggtttgaaggggtcaaacatctcaactaaagtagtggtatcctcagcacgttctatggttactat---------aactgagaaagcaggagaaagctgggtctcccgccatctgggtgcttgtcctAAAGAGGTGTTTTATGTGGTTACCTGTCAATCAAGAAATGCGAGGCAATTCATAAAGAGGAACTGCTATGATCAGCTTCTTATTGGTGTCTCGTCTTCTTCCAGGTAACCCCAGACACCTGCACGTTCTGATTGGGACCTCAGTGGCCATCAtcctcctcatcctcctcctcttctttctcctTCATCGCTGGTGCTCCAACAAAAAAAGTAAGTCTCATGAAGCAGAGGCCAGAGAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCACTCAGGTGTGTGTTCCTCACCGGCAGGATGGTCCCTGGCCCAAGGCAGGAGCCACAGAGGCAGGACTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTGTCCTCACGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTT-GAGCTCAGAGAGATAGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56643195 1112 + 60714840 ctgtcttagtccatttttgttgctataaaggaacacttgagcctgggtaacttctaaagaaaagagatttgtttgcctcacagttctgcaggctgcactggaagcatggcaccagcatctatttcctgtgacggcctcaggctgctcccactctggcagaaggggaggagggtctgtctgtgc--agaccacacagatcacacggcaagagagggagtaagtgggagggggagcgatggagcttccaagctctttttaacaaccagctctccaggaactaacagagggggaacttgctaaccccgtctccttggaacagcattgatctgttcatgatggatccacctccatcacccaaacacctcccaagaggcccaacctcccacactgggagttaaatttcaatgtgaggtttgaaggggtcaaacatctaaactaaagtagttgcatcctcagcacattctatggttactatgagagctataactgagaaagcaggagaaagctaggtctcccgccatctgggtgcttgtcctAAAGAGACGTTGTATGTGGTTACCTGTCAATCAACAAATGCGAGACAATTCATAAAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCGTCTTCTTCCAGGTAACCCCAGACACCTGCACGTTCTGATTGGGATCTCAGTGGTCATCATCCCCTTTGCCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAAAGTAAGTCTCACGAAGCAGGGGCCAGAGAGCTCAGGGCCGTGTGGGGAAGCAAGATTGGAGCACGCGGGTGTGTGTTCCTCACTGGCAGGAAGGTCTCTGGCCCAAGGCAGGAGCCTCAGAAGCAGGACTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTATCCTCACATTCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTT-GAGCTCAGAGAGATTGAGTGTCTGAGTCT-GCTGTTGGCAAGTGAGGGACCTCAGGCA i ponAbe2.chr19 C 0 T 55725 s rheMac3.chrUn_JH290802 7039 1113 + 40826 Ctgtcttagtccctttttgaggctataaaagaacacttgagcctgggtaacttctaaagaaatgagatttgtttgcctcacagttctgcaggctgtactagaagcatggaaccagcatctatttcttctgatggcctcaggctgctcccactctggcagaaaggaaggagggtctgtgtgtgcagagac--cagagatcacacagcaagagagggagcaaggggaagagggagcgatggagtttccaagctctttttaacaaccagctctccaggaactaatagagggagaacttgctaaccctgtctccttgggacagcattgatctattcaggatggatccacctccatgacccaaacacctcccaagaggcccaacctcccacactgggggttacatttcaatgtaaggtttcaaggggtcaaacatctaaactaaagcagtggtatcctcagcacattctatggttactatgagagctataactgagagaggaggagaaagctgggtcTCCTGCTATCTGGCTGTTTGTCCTAAAGAGACGTTGTATATGGCTACCTGTCAATCAAGAAATGCGAGACAATCCATAGAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCGTCTTCCTCCAGGTATCCCCAGACACCTGCATGTTCTGATTGTGTCCTCAGTGGTCATCATCCCCTTCACCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAGAGTAAGTCTCACGAAGCAGAGGCCAGAGACCTCAGGGCCCCGTGGGGAAGCGGGATGGAAGCACGCAGGTGTGTGTTTCTCACTGGCAGGATGGTCTCTGGCCCAAGGCAGGAGCCACAGAGGCAGAGCTTTCTAGAGAGAGCACCAGACCCCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCCGATTCTCAACTGTATCCTCATGT-CCCGGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGGCAGAATCACTGGGATGGGAACTCAGAGCTATTCATGGGATGAGTCCTTGCAGCTCAGAGAGATAGAATGTCTGAGTCTGGCTGTTGGCAACTGAGGGACCTCAGGCA i rheMac3.chrUn_JH290802 T 30357 C 0 s papAnu2.chr19 47704492 1113 + 51301725 CCGTCTTAGTCCCTTTTTGTGGCTATAAAAGAACACTTGAGCCTGAGTAACTTCTAAAGAAATGAGATTTGTTTgcctcatagttctgcaggctgtactaGAAGCATGGAACCAGCATCTATTTCTTCTGATGGCCTCAGGCTGCTCCCACTCTGGCAGAAAGGAAGGAGGGTCTGTGTGTGCAGAGACCACAGAGATCACActgcaagagagggagcaaggggAAGAGGGAGCGATGGAGCTTCCAAGCtctgtttaacaaccagctctccagGAACTAATAGAGGGAGAACTTGCTAACCCTGTCTCCTTGGGACAGCATTGATCTATTCACGAtggatccacctccatgacccaaacacctcccaagaGGCCCAACCTCCCACACTGGGGGTTAAATTTCAATGTGAGGTTTCAA-GGGTCAAACATCTAAACTAAAGCAGTGGTATCCTCAGCACGTTCTATGGTTCCTATGAGAGCTATAactgagagaggaggagaaagctgGGTCTCCCGCCATCTGGCTGTTTGTCCTAAAGAGACGTTGTATATGGCTACCTGTCAATCAAGAAATGCGAGACAATCCATAAGGAGGAACCGCTGTGATTAGCTTCTTATTGGTGTCTCGTCTTCCTCCAGGTAACCCCAGACACCTGCATGTTCTGATTGTGTCCTCAGTGGTTATGATCCCCTTCAccatcctcctcttctttctcctgcatCGCTGGTGCTCCAACAAAAAGAGTAAGTCTCACGAAGGAGAGGCCAGAGACCTCAGGGCCTTGTGGGGAAGTGGGATGGGAGCACGCAGATGTGTGTTTCTCACTGGCAGGATGGTCTCGGGCCCAAGGCAGGAGCCACAGAGGCAGGGATTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCCCAGACCATTGCCTGATTCTCAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGGCAGAATCACTGGGATGGGAACTGACAGCTCTTCATGGGATGGGTCCTT-TAGCTCAGAGAGACAGAATGTCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCAGGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47385231 1114 + 50890351 ccgtcttagtccctttttgaggctataaaagaacacttgagcctgggtaacttctaaagaaacgagatttgtttgcctcacagttctgcaggctgtactggaagcacggaaccagcatctatttcttgtgatggcctcaggctgctcccattctggcagaaaggaaggggggtctgtgtgtgcagagaccacagagatcacacggcaagagagggagcaagggggagggggagcaatggagcttccaagctctttttaacaaccagctctccaggaactgatagagggagaacttgctaaccctgtctccttgggacagcattgatctattcacgatggatccacctccatgaccccaacacctcccaagaggcccaacctcccacactgggggttaaatttcaatgtgaggtttcaaggggtcaaacatctaaactaaagcagtggtatcctcagcacgttctatggttactatgagagctataactgagagaggaggagaaagctgggtctcccgccatctggCTGTTTGTCCTAAAGAGACGTTGTATATGGCTACCTGTCAATCAAGAAATTCGAGACAATCCATAAGGAGGAACTGCTGTGATTAGCTTCTTATTGGTGTCTCGTCTTCCCCCAGGTAACCCCAGACACTCGCATGTTCTGATTGTGTCCTCAGTGGTCATCATCCCCTTCACCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAAAAAAAAGAGTAAGTCTCACGAAGCAGAGGCCAGAGACCTCAGGGCCCTGTGGGGAAGCGGGATGGGAGCACGCAGGTGTGTGTTCCTCACCGGCAGGATGGTCTCTGGCCCAAGGCAGGAGCCACAGAGGCAGGGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATCGGATGAGTCCTT-GAGCTCAGAGAGATAGAATGTCTGAGTCTGGCTGTTGGCAACTGAGGGACCTCAGGCA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19801046 91799 - 122678785 I a score=36853.000000 s hg38.chr19_GL949747v2_alt 401250 35 + 729520 CCTATGGTCTCCCCCTGTATGTTGGTATCTGCTTA s panTro4.chr19 59654178 35 + 63644993 CCTATGGCCTCCCCCTGTATGTTGCTATCTGCTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56588582 35 + 60714840 CCTATGGCCTCCCCCTGCATGTTGCTATCTGCTTA i ponAbe2.chr19 T 55725 I 55690 s rheMac3.chrUn_JH290802 8152 35 + 40826 CCTATGGCCTCCCCCTGTATCTTGGTATCTGCTTA i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47705605 35 + 51301725 CCTACAGTCTCCCGCTGTGTGTTGGGCTCTGCTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47386345 34 + 50890351 CCTATGGCCTCCC-CTGTATCTTGGTATCTGCTTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19801046 91799 - 122678785 I a score=225842.000000 s hg38.chr19_GL949747v2_alt 401285 196 + 729520 TGAAATGAGGACCCAGAAGTGCCCTCCGAGCTGTTTTGTTGACTTCCGTCTTCTACAGATGCTGCGGTAATGGACCAAGAGTCTGCAGGAAACAGAACAGCGAATAGCGAGGTAGGTACTCCTCGGCCCGGGCTCGTGG--CTACTGTTATTCCCAAAGAGTCCTGGAAAATGTGAGCACCCTCCCTCACTCAGCATT s panTro4.chr19 59654213 196 + 63644993 TGAAATGAGGACCCAGAAGTGCCCTCTGAGCTGTTTTGATGACTTCCGTCTTCTACAGATGCTGCTGTAATGGACTAAGAGCCTGCAGGGAAAAGAACAGTGAAGAGGGAGGTAGGTGCTCCTTGGCCCAGCCTCGTGG--CTAGTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGCACCCTCCCTCACTCAGCATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56644307 196 + 60714840 TGAAATGAGGACCCAGAAGTGCCCTCCGAGCTGTTTTCTTGACTTCCGTCTCCTACAGATGCTGCTGTCATGGACCAAGAGCCTGCAGGGAACACAACAGTGAAGAGGGAGGTAGGTGCTCCTTGGCCCAGCCTCATGG--CTAGTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGCACCCTCCCTCACTCAGCATT i ponAbe2.chr19 I 55690 C 0 s rheMac3.chrUn_JH290802 8187 198 + 40826 TGAAATGAGGACCCAGAAGTGTCCTCCCAGCTGTTTTGATGACTCTCGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTTGCCCCAGCCTCATGGATATAGTCTTATTCCCTAAGAGGCCTGAAAAATAGGAAGCCCCTCCCTCACTCAACATT i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47705640 198 + 51301725 TGAAATGAGGACCCAGAAGTGTCCTCCCAGCTGTTTTGATGACTTCCGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGTGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGCCCCAGCCTCATGGATATAGTCTTATTCCCTAAGAGGCCTGAAAAATAGGAACCCTCTCCCTCACTCAACATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47386379 195 + 50890351 TGAAATGAGGACCCAGAAGTGCCTTCCCAGCTGTTTTGATGACTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGCCCCAGTCTCGTGG--ATAGTCTTATTCCCTAAGAGGCCTGAAAAATAGGAACCCCCTCCCTCACT-AACATT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19801046 91799 - 122678785 I a score=241535.000000 s hg38.chr19_GL949747v2_alt 401481 170 + 729520 TCCCTCTCTC-CAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATACACACAGTTGAATCACTGCGTTTTCACACAGAGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATATCATCGTGTACACGGAACTT-CCAAATGCTGAGTCCAGATCCA s panTro4.chr19 59654409 170 + 63644993 TCCCTCTCTC-CAGGACTCTGATGAACAAGACCCTCAGGAGGTGTCATACGCATAATTGGATCACTGCGTTTTCACACAGAGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAGCATGTACATAGAACTT-CCAAATGCTGAGCCCAGATCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56644503 170 + 60714840 TCCCTCTCTC-CAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTTTCACACAGAGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCATCGTGTACACGGAACTT-CCAAATGCTGAGCCCAGATCCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 8385 168 + 40826 TCCCTCTCTC-CAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACCGCGTTTTCACACAGAGAAAAATCGCTCGCCCTTCTCAGAGGCCCAAGAGACCCCCAACAGATACCAGCGTGTACATAGAACTT-CCAAATGCTGAGCCCAGATC-- i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47705838 168 + 51301725 TCCCTCTCTG-CAGGACTCTGATGAACCAGATCCTCAGGAGGTGACATACGCACAGTTGGATCACCGCGTTTTCACTCAGAGAAAAATCGCTCGCCCTTCTCAGAGGCCCAAGAGACCCCCAACAGATACCAGCGTGTACACGGAGCTT-CCACATGCTGAGCCCAGATC-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47386574 170 + 50890351 TCCCTCTCTC-CAGGACTCTGATGAACCAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTCTCACACAGGGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAGCGTGTACACGGAACTT-CCAAATGCTGAATCCAGATCGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102921173 172 + 122678785 TCTCTCTCTCTCAGACCCCTACTGCAGGAGGCCCCCAGGACGTGACATATGCTCAGCTGGACCACCACATCCTCACACAGAGGACAGCTCCAGCCACATCCCCACAGTCTGTGGAGCCCATGGCTGAGTCCAGTACATATGCAGCCCTTGCCAGACACTGACTCCATGCCCA i canFam3.chr1 n 91799 I 36357 a score=700286.000000 s hg38.chr19_GL949747v2_alt 401651 631 + 729520 AAGTTGTCTCCTGCCCATGAGCACCACAGTCAGGCCTTGAGGGCGTCTTCTAGGGAGACAACAGCCCTGTCTCAAAACCGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATGAGTCTGCATCTTAGGGCATCGATCTTCCTCACACCACAAATCTGAATGTGCCTCTCACTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGGAGAAAAAACACACTCCTTTGCTTAGCCCACAGTTCTCCATTTCacttgacccctgcccacctctccaacctaactggcttacttcctagt-ctacttgaggctgcaatcacactgaggaactcacaattccaaacatacaagaggctccctcttaacgcagcacttagacacgtgttgttccaccttccctcatgctgttccacctcccctcagactagctttcagtcttctgtcagcagtaaaacttatatatt------tttt----------------------------aaaa-------taacttcaatgtagttttccatccttcaaataaacatgtctgcccccatgg-tttcggtaatgggactcttttcttgcctaaggcttccggtgttatcagtaccatgtccatataatcccatctgttccccactgagttctcatccccgga s panTro4.chr19 59654579 610 + 63644993 AAGTTGTCTCCTGCCCATGAGCACCACAGTCAGGCCTTGATGGGATCTTCTAGGGAGACAACAGCCCTGTCTCAAAAACAGGTTGCCAGCTCCCATGTACCAGCAGCTGAAATCTGAAGGCGTCAGTCTTCATCTTAGGGCATCGCTCTCCCTCACACCACGAATCTGAACATGCCTCTCTCTTGCTTACAAATGTGTAAGGTCCCCACTGCCTGCTGGAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCacttgacccctgcccacctctccaacctaactggcttacttcctagt-ctacttgaggctgcaatcacactgaggaactcacaattccaaacatgcaagaggctccctcttaacacagcacttagacacg--------------------tgctgttccacctcccttcagactatctttcagccttctgccagcagtaaagcttataaatt------tttt-----------------------------aaa-------taatttcaatgtagttttcccgccttcaaataaacatgtctgccctcatgg-tttcggtaacgagactcttttcttgcctaaggcttccggtgttatcattaccatgtccacataaccccatctgttctccactgggttctcagccctgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56644673 670 + 60714840 AAGTTGTCTCCTGCCCGTGAGCACCACAGTCTGGCCTTGAAGGGGTCCTCTAGGGAGACAACAGCCCTGTGTCAAAACCAGCTTGCCAGCTCCCATGTACCGGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGCATTGCTCTTCCTCACACcacaaatct---cgtgcctctctgttgcttacaaatgtctatagttcccactgcctgctggagagaaaacacactcctttgcttagttcacaattctctatttcacgtgacccctggccacctctccagcctaactggcttacttcctagt-ctacttgaggctgcggtcacactgaggaactcacagttccaaacatacaagaggctcgctcttaacaaggcacttacgcacgtgctgttccaccttccctcatgctgttccacctttcctcagacaatctttcagccttctgtcatcagttaaatTAATAAATTTATAAATTTTCCAGCCTTCCATCATCAGTGGAACTTATAAAATTTTTTGTGATTTCAATGTAGCTGTCTCCTCTTCAAATAAATATGTCTGCCCTCATTGCTTTAGGTAATATGACACTGTATTGGCTGAAAGAAACTGGTGTTATCATTACCATGTCCATATAACCCCATCTGTTCTCCACTGGGTtctcacccctgga i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 8553 628 + 40826 --ATTGTCTCCTGCCCGTGAGCACCAGAGTCAGGCCTTGAGGGGGTCCTCCAGGGAGACAACAGCCCTGTCTCAAACCCAGCTTGCCAGTTCCAATGTACCAGCAGCAGGAATCTGAAGGCGCGACTCTGCATCTTAGGACATCGCTCCTCCTCACACCACGAATCTGAACGTGCCTCTCTCTTGCTTGCCAATGTCTAAGGTCCTCACTGCCTGCTGGAAAGAAAACACACTCCCTTGCTTAGCCCACAATTCTCCACTTCACTTGACCCCAGCCCACATCTCCAACCT-ACTGGCTTACTTCCTAGTCCTACTGGAGGCTGCAGTCACACCAAGGAACTCACAATTCCAAACAGACGAGAGGCTCCCTCTTAACACGGCACTTAGACACGTGCTGTTCCACCTTCCCTCATGCTGTTCCACCTCCCCCCAGACTATCTTTCAGCC-TCTGTCAGCAGTGAAACttataaatt------ttta----------------------------aaaa-------taatttCAATGTAGTTGCCTCTTCTTCAAATAAACATGTCTACCCTCATGG-TTTCAGTAATGTGACTCTTTTCTTGCCGAAAGTTTCCGGTGTTATCATTACTATGTCCATGTAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGA i rheMac3.chrUn_JH290802 C 0 I 189 s papAnu2.chr19 47706006 628 + 51301725 --ATTGTCTCCTGCCCATGAGCACCACAGACAGGCCTGGAGGGGGTCCTCCAGGGAGACAACAGCCCTGTCTCAAACCCAGGTTGCTGGTTCCAATGTACCAGCAGCAGGAATCTGAAGGCGCGACTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTTGCTTGCCAATGTCTAAGGTCCCCACTGCCTGCTGGAAAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCACTTCCCTTGacccctgcccacctctccaaCCT-ACTGGCTTACTTCCTAGTCCTACTGGAGGCTGCAGTCACACTGAGGAACTCACAGTTCCAAACATACGAGAGGCTCCCTCTTAACACAGCACTT-GACAGGTGCTGTTCCACCTTCCCTCATGCTGTTCCACCTCCCCCCAGACTATCTTTCAGCCTTCTGTCAGCAGTGAaacttataaatt------ttta----------------------------aaaa-------taatttcaatggaGTTTTCTCTTCTTCAAATAAACATGTCTGCCCTCATCC-TTTAGGTAATGTGACTCTCTTTTGGCTGAAAGAAACCGGTGTTATCATTACTATGTCCATATAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47386744 631 + 50890351 AAGTTGTCTTCTACCCATGAGCACCACCGTCAGGCCTTGCAGGGGTCTTCTATGGAGACAACAGTCCTGTCTCAAAACTGGCTTGACAGCTCCAATGTACCAGCAGCAGGAATCCGAAGGTGTGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACGTGCCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCacttgacccctgcccacctctccaacct-actggcttacttcctagtcctactggaggctgcagtcacactgaggaactcacaattccaaacatacaagagactccctcttaacacagcacttagacatgtgctgttccaccttccctcatgttgttccacctcccctcAGACTATCTTTCAGCCTTCTGTCAGCAGTAAAACTTATAAATT------TTTA----------------------------AAAA-------TAATTTCAATGTAGTTACCTCTTCTTCAAATAAACATGTCTATCCTCATGG-TTTCAGTAATGTGACTCTTTTCTTGCTGAAAGTTTCCGGTGTTATCATTACTATGTCCATGTAACCCCATATGTTCTCCACTGGATTCTCACCCCTAGA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I a score=28070.000000 s hg38.chr19_GL949747v2_alt 402282 35 + 729520 ctctgagtttctggaagcagggtggagcctcattt s panTro4.chr19 59655189 35 + 63644993 ctctgagcttctggaagcagaatggagcctgattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56645343 35 + 60714840 ctctgagcttctggaagcagggtggagcctgattt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47706634 34 + 51301725 CTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47387375 34 + 50890351 CTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e rheMac3.chrUn_JH290802 9181 189 + 40826 I a score=455732.000000 s hg38.chr19_GL949747v2_alt 402317 403 + 729520 gtctctgggactccaatttccatccaaagatgtagcacataggaggTTCCAAGGATCACGAATCATATGAACAAGTGATACTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACAATGAAACATTTGTAGAATCATAGGCCTTGTTAGTCTCAT---CTCCATGGGGACACATATCAACACATCATCTTTCATaatataaatatacggtcactcctccatatctgcggggtttacaggtgtttattgaaccaagtataaatcaaaaatattgagag---aaagtatccacagagtttcaaaa-agc--ataactatgttgaatggacacaaatgaagc--tgtgtgtaggctgtatcaggaattataagtaatctagagatgatttcatgtatacaggaggatg s panTro4.chr19 59655224 406 + 63644993 gtctctgAGACTCCAATTTCCATCCAAAGATACAGCACATAGGAGGCTCCAAGAATCGTGAATCACATGAACAAGGGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCAT---CTCCACGGGGACACATATCAACATATCATCTTTCATAATATAAATATAcagtcggtcctccatatctgcggggtttacaggtgtttattgaaccaacaatagatcaaaaatattttgag--aaaaaaatccccgaagtttcaaaa-agcaaaaaactatgttgaatcgacacaaattgagt--ggtgtataggctgtgtcaggaattataagtaatcaagagatgatttcatgtatacaggaggatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56645378 406 + 60714840 gtctgtgggactccaatttccatctaaagatgcagcacataggaggtTCCAAAGATCGTGAATCGCATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACGATGAAACATTTGCAGAGTCATAGGTCTTGTTAGTCTCATCTCCTCCACAGGGACACATATCAACACATCATCTTTCATACTATAAATATAcagtcactcctctgtatctgtggggtttacaagtgtttattgaaccaactataaatcaaaaatattcagag---aatatatccacaaaatttcaaaa-agc--aaaactatgttgagtggacacaaatgaagc--ggtgtgtaggctgtatcaagaattataagtcatctacagatgatgtaatgtatacaggagtatg i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 9370 402 + 40826 GTCTCCAGGACTCCAATTT-CATCCAAAAATGCAGCACATAGGAGGTTGCAAGGATCGTGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACATGTGTAGAGTCATAGGCCTTGTTAGTGTCAT---CTCCATGGGGacacatgtccacacatcatctttcataccataaatacacagtcgctcctctagatctgtggggtttacaggtgtttattaaaccaactataaatcaaaaatattcagag---aaaaaatccacaaaatttcaaaa-agc--aaaactatgttgaatggacacaaatggaat--ggtgtgtaggctgtgtcaggaattataagtaatctagagatgatttcatgtatacaggaggatg i rheMac3.chrUn_JH290802 I 189 I 30191 s papAnu2.chr19 47706668 409 + 51301725 GTTTCTGGGACTCCAATTTCCGTCCACAGATGCAGCGCATAGGAGGTTTCAAGGATCGTGAATCAGATGAACGAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACACCTGTAGAGTCATAGGCCTTGTTAGTCTCAT---GTCCACGGGGACACATGTCCACACATCATCTTTCATACCATAAATACACAGTCGCTCCTCCAGATCTGTGGGGTTTACAGGTGTTTATTGAACCaactataaaccaaaaatattttgagaaaaaaaaatccccgaagttccaaaaccaa--aaaaccatgTTGAATGAACACAAATGGAGTGGGGTGTGTAGGCTGTGTCAGGAattataagtaatccagagatgatttCATGTATGCAGGAGGATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47387409 405 + 50890351 GTCTCTGGGACTCCAATTTCCATCCACAGATGCAGCTCATAGGAGGTTGCAAGGATCGTGAATCAGAGGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTTCAAGATGACACATTTGTAGAGTCATAGGCCTTGTTAGTCTCAT---Ctccacagggacacatgtccacacatcatc-ttcatactataaatacacagtcgcttctccagacctgtggggtttacaggtgtttattgaaccaactataaatcaaaaacattttgag-aaaaaaaatccccgaagttcaaaaaccaa--aaaaccatgttgaatggacacaaatggagt--ggggtgtaggctgtgtcaggaattataagtaatccagagatgatttcatgtatacaggaggatg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I a score=11945.000000 s hg38.chr19_GL949747v2_alt 402720 10 + 729520 tgcataggtt s panTro4.chr19 59655630 10 + 63644993 tgcatgggtt i panTro4.chr19 C 0 I 34480 s ponAbe2.chr19 56645784 10 + 60714840 tgcatgggtt i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 39963 10 + 40826 aacatgggtt i rheMac3.chrUn_JH290802 I 30191 C 0 s papAnu2.chr19 47707077 10 + 51301725 TGCATGGGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47387814 10 + 50890351 tgcatgggtt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I a score=7328.000000 s hg38.chr19_GL949747v2_alt 402730 8 + 729520 atttgcaa s panTro4.chr19 59690120 8 + 63644993 atttgcaa i panTro4.chr19 I 34480 C 0 s ponAbe2.chr19 56645794 8 + 60714840 atatccaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 39973 8 + 40826 atatgcaa i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47707087 8 + 51301725 ATAGGCAA i papAnu2.chr19 C 0 I 301 s chlSab2.chr6 47387824 8 + 50890351 atatgcaa i chlSab2.chr6 C 0 I 319 e canFam3.chr1 102921345 36357 + 122678785 I a score=546.000000 s hg38.chr19_GL949747v2_alt 402738 1 + 729520 a s panTro4.chr19 59690128 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56645802 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 39981 1 + 40826 a i rheMac3.chrUn_JH290802 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e chlSab2.chr6 47387832 319 + 50890351 I e papAnu2.chr19 47707095 301 + 51301725 I a score=218.000000 s hg38.chr19_GL949747v2_alt 402739 2 + 729520 cg s panTro4.chr19 59690129 2 + 63644993 ct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56645803 2 + 60714840 tg i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 39982 2 + 40826 cg i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47707396 2 + 51301725 ca i papAnu2.chr19 I 301 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e chlSab2.chr6 47387832 319 + 50890351 I a score=128717.000000 s hg38.chr19_GL949747v2_alt 402741 115 + 729520 ctgtgccatttcatataagaggcttgagcatctacagattttggtatctgagtggagatctcaaaaccaatcacccacgaatagtgaaggatgaccgtatatgacttttatttct s panTro4.chr19 59690131 115 + 63644993 gtgttccatttcatataagaggcttgagcatctacagattttggtatctgagtggagatctcgaaaccaatcacccacgaatagtgaaggatgactgTATATGACTTTTATTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56645805 114 + 60714840 ctgtgtcattttatgtaagaggcttgagcatctgcagattttggt-tctgagtggagatcctgaaaccaatcacccacgaatagtgaaggatgactgTATATGACTTTTATTTCT i ponAbe2.chr19 C 0 I 308 s rheMac3.chrUn_JH290802 39984 115 + 40826 ctctgccattttatgtaagaggcttgagcatctgcagattgtggtatctgagcggagatcctgaaaccaatcacccacgaatagtgaaggacgactgTATCTAACTTTTATTTCT i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47707398 115 + 51301725 cTGTGACATTTCACGCAAGAggcttgagcatctgcagattttggtctCTGAatggggatcctggaaccaatcacCCAGGAATAGTAAAGGACAACTGCATATAATTCTTAtttgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47388151 115 + 50890351 ctgtgccatttcatgcaagaggcttgaggatctgcagattttggcctctgaatggggatcctggaaccaatcacccaggaatagtgaaggacgactgtatataattcttatttgt i chlSab2.chr6 I 319 C 0 e canFam3.chr1 102921345 36357 + 122678785 I a score=69969.000000 s hg38.chr19_GL949747v2_alt 402856 69 + 729520 caaatttaaatataaatcataaaAAATGTAC---AACTAGAT-AAAAACTAAGAAGTGTTTTtatagtgtgag s panTro4.chr19 59690246 69 + 63644993 CAAATTTAAATATAAATCATAAAAAATGTAC---AACTAGAT-AAAAACTAAGAAGTGTTTTtatagtgtgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56646227 72 + 60714840 caaatttaaatataCATCATAAAAAATGTACAATAACTAGAT-AAAAACTAAGAAGTGTTTTtatagtgtgag i ponAbe2.chr19 I 308 I 7 s rheMac3.chrUn_JH290802 40099 72 + 40826 CaattttaaatataaatcataaaaaatttaCAATACCAAGATAAAAAAACAAGAAGTG-TTTtatagtgtgag i rheMac3.chrUn_JH290802 C 0 I 7 s papAnu2.chr19 47707513 72 + 51301725 caattttaaaaataaagcataaaaaatttacaacaggaaaat-aaaaaataagaagtgttTTTATAGTGTGAG i papAnu2.chr19 C 0 I 7 s chlSab2.chr6 47388266 72 + 50890351 caattttaaaaataaAGCATAAACAATTTACAACAATAAAAT-AAAAAATGAGAAGTGTTTTTATAGTGTGAG i chlSab2.chr6 C 0 I 58430 e canFam3.chr1 102921345 36357 + 122678785 I a score=49553.000000 s hg38.chr19_GL949747v2_alt 402925 59 + 729520 ttagatttattttttcctaggtgtaaccaattggtttaatattatttattgagaagaca s panTro4.chr19 59690315 59 + 63644993 ttagatttattttttcctaggtgtaacccattggtttaatattatttattgtgaagaca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56646306 59 + 60714840 ttagatttattttttcctatgtgtaaccctttggtttaatgttatttattgagaagacg i ponAbe2.chr19 I 7 C 0 s rheMac3.chrUn_JH290802 40178 58 + 40826 gtagatttatttttttctatgcgtaaccct-tgggcccatgttatctatggagaagaca i rheMac3.chrUn_JH290802 I 7 C 0 s papAnu2.chr19 47707592 55 + 51301725 TTAGATTGATTTTTTCCTACGTGTAACCCTATGGCCCTGTGTTATTTGTTGAGA----A i papAnu2.chr19 I 7 C 0 s chlSab2.chr6 47446768 58 + 50890351 atagatttatttttttctatgcgtaacgct-tgggcccatgttatctatggagaagaca i chlSab2.chr6 I 58430 T 58443 e canFam3.chr1 102921345 36357 + 122678785 I a score=331723.000000 s hg38.chr19_GL949747v2_alt 402984 327 + 729520 ttctatgccaccttaaaccacacggcagcctttgtcaactctaaagggactgtgtgtacatggatgtattttagacactg-tttctgctaaggggctctctgtgtccacactcttgatgatgctgcactttatgtagccttatagaacccttt-aaatttagtagccagagccctctaatttgttattATAGGCTGTTTGC----------ttttttttt------------cttgaggcggagtcttgctctgtcgcccaggctggactgcagtggcacaatctcagctcactgcaacctccgcctcccaggttcaagcgattctcgtgcctcagcctcttgagtagctg s panTro4.chr19 59690374 330 + 63644993 ttctatgccaccttaaaccacacagcagcctttgtcaactaaaaagggactgtgtgtacgcggatgtactttagacactg-tttctgctaaggggctctctgtgtccacactcttgaggatgctgcactttatgtagccttataaaacccttt-aaatttagtagccagagccctctaatttgttattATAGGCTACTTGCTA-------tttttttttt------------cttgaggcggagtcttgctctgtcgcccaggctggactgtagtggtgcaatctcagctcactgcaacctccgcctcccatgttcaagcgattctcgtgcctcagcctcttgagtagctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56646365 329 + 60714840 ttctatgccaccttagaccacacggcagcctttgtcaaccataaagggactgtgtgtacacggatgtattttagacactgttttctgctaaggggttgtctgtgtccacactcttgaggatgctgcactttatgtagccttatagaacccttt-aaatttagtagccagagccctctaatttgttattATAGGCTATTTGC---------TAtttttttt------------cttgaggtggagtcttgctctgtcgcccaggctggactgcactggcgcagtctcagctcactgcaacctccgccttccaggttcaggtgattctcgcgtctcagcctcttgagtagctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 40236 325 + 40826 ttctattcctccttaaaccacacggcagcctttgtcaACTCTAACGGGACTGTGTGTTCACGGATGTATTTTAGACACTGTTTG------------TCTCTGTGTTCACTCTCTTGAGGATGCTGCACATTATGTAGGCTTACACAACCCCTTAAAATTTGGTAGCTGGAGTCCTCTACTTTTTTATTATAGGCTATTTGCTAGGCTTTTTAAAATAttt------------cttgaggcag--tctcactctgtcgcccaggctggactgaagtggcacgatctcagctcaccgcagcctttgcctcctgggttcaagtgattctcctgcctcagcctcccaagtagctg i rheMac3.chrUn_JH290802 C 0 I 233 s papAnu2.chr19 47707647 341 + 51301725 TTCTATTCCACCTTAAATCACATGGCAGCCTGGGTCAACTGTAAAGGGACTGTGCATCCATGGGTGTATTTTAGACAGTCTTTTCTGCCCAGTGGCTCTCTGTATCCCCTCTGATGAGGATGCTACACTTCATGTAACCTTATAGAACCCCTTAAAATTTGGTAACCTGAGTCCTCTGATTTGTTATTATAGgttatttagtttgctttttttttttttt----------tccttgagacagactcttcctctgtcacccaagctggatttcagtggcacaagctcagctcactgcaacctccgcctcccaggttcaagcaattctcgtgcctaggcctcttgagtagctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47388383 351 + 50890351 TTTTATTCCACCTTAAACCACATGGCAGCCTGTGTCAACTGTAAAGGGACTGTGCATCCACGGGTGTATTTTAGACACTCTTTTCTGCCCAGTGGTTCTCTGTATCCCCTCTGATGAGGATGCTACACTTTATGTAACCTTATACAACCCCTTAAAATTTGGTAACCTAAGCCCTCTGATTTGTTATTATAGGTTACTTAGTTTGCtttttttttttttttttttttttttccttgagacagactcttcctctgtcacccaagctggatttcagtggcacaagctcagctcactgcaacctccgcatcccaggttcaagcaattctcgtgcctaggcctcttgagtagctg i chlSab2.chr6 T 58443 C 0 e canFam3.chr1 102921345 36357 + 122678785 I a score=158138.000000 s hg38.chr19_GL949747v2_alt 403311 246 + 729520 gcgttacaggtgcctgccaccaggcacggctaatttttggatttttaacagagacacggtttcactatattggccaggctgctctcaaactccttatctcagttgatccgcccacctcggcttcccaacgtgctgggGAAAACTTGATTTTCTATAGCATTATGTTACTGGATATTTCTGTAAAATTTAAAAC-gagggagggagagagac----------------------------------------------------------------agacagagagCAAACTCCAGAGTTGGGACTCTGGAA s panTro4.chr19 59690704 245 + 63644993 gcatttcaggtgcctgccaccaggctcggctaatttttggatttttagcagagacacggtttcactgtgttggccaggctgctctcaatctcctcatctcagttcatccgcccacctcggcttcccaacgtgctgggG-AAACTTGATTTTCTATAGCATTATGTTCCTGGATATTTCTGTAAAATTTAAAAT-GAGGGAGGGAGAGAGAC----------------------------------------------------------------AGAGAGAGAGCAAACTCCAGAGTTGGGACTCTGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56646694 247 + 60714840 acattacaggtgtgtgccacgaggcatggctaatttttgagtttttagcagagacacggtttcactatgttggccaggctgctctcaaactcctcatctcagttgatccgcccacctcggcttcccaacgtgcggggGGAAACTTGATTTTCTATAGCATTATGTTACTGGATATTTCTGTAAAATTTAAAAAGGAGGGAGGGAGAGAGAC----------------------------------------------------------------AGAGAGAGAGCAAACTCCAGAGTTGGGACTCTGGAA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47707988 239 + 51301725 ggagtacaggtgcccgccaccaagccccactaacttttgtatttttagcagagacagggttgaaccatgttggccaggctggtcttgaactgccgacctcaagtgatccacccacctctgcctcccaaagtgctgggggaagCTTGATTTTCTATCGTAT--TGTTACTGGACAttcctataaaatttaaaat-gagggagggagagagac--------------------------------------------------------------------agagagcaaac-CATGAGTTTGGAATCTGGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47388734 307 + 50890351 ggagtacagatgcccgccactgagccccactaacttttgtatttttagcagagacagggttgcaccatgttggccaggctggtcttgaactgacgacctcaagtgatccacccacctcagcctcccaaagtgctgggGGAAACTTGATTTTCTATCGTAT--TGTTACTGGATATTCCTGTAAAATTTAAAAT-gagagagggagagagacagagagagagcgaaccagggagggagagagacagagagagagcgaaccagggagggagagagacagagagagagCAAAC-CATGAGTCTGGAATCTGGAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e rheMac3.chrUn_JH290802 40561 233 + 40826 I a score=35690.000000 s hg38.chr19_GL949747v2_alt 403557 27 + 729520 TCTTGGGTCATGAGACAAATTTTAGAT s panTro4.chr19 59690949 27 + 63644993 TCTTGGGTCATGAGACAAATTTTAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56646941 27 + 60714840 TCTTGGGTCATGAGACAAATTTTAGAT i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 40794 27 + 40826 TCTTGGGTCATGAGACAAATTGTAGAT i rheMac3.chrUn_JH290802 I 233 T 29625 s papAnu2.chr19 47708227 27 + 51301725 TCTTGGGTCATGAGACAAATTCTAGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389041 27 + 50890351 TCTTGGGTCATGAGGCAAATTCTAGAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I a score=96211.000000 s hg38.chr19_GL949747v2_alt 403584 140 + 729520 TAAACTACAAAACTCCAGAATTTACAGG-TGTGGTTTTTGCTGATAAAGTACAATTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAATTTAAATCATTTTAGCTGGTTCTGCTGTAATACTAGAAATACAAGCA s panTro4.chr19 59690976 140 + 63644993 AAAACTACAAAACTCCAGAATTTACATG-TGTGGTTTTTGCTGATAAAGTACAATTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAATTTAAATCATTTTAACTGGTTCTGCTGTAATACTAGAAATACAAGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56646968 141 + 60714840 AAAACTACAAAAATCCAGAATTTACATGTTGTGGTTTTTGCTGATAAAGTACAATTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAACTTAAATCACTTTAACTGGTTCTGCTGTAATACTAGAAATACAAGCA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47708254 139 + 51301725 AAAATGACAAAA-TCCAGAATTTACTTGTTGTGTTTTCTGCTAATAAAGTGGGATTCTAAGATCATAAATAACTGCATAATCCTTCACTGTGAATTTAAATCATTTTCACTCCTTCTGGGTTAGTACTAgaaattcaaga- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389068 140 + 50890351 AAAACGACAAAA-TCCAGAATTTACATGTTGTGTTTTTTGCTAATAAAGTAGGATTCTAAGAGCATAAATAACTGCATAATCCTTCACTGGGAATTTAAATCATTTTCACTCTTTCTGGTTTAGTACTAGAAATTCAAGAA i chlSab2.chr6 C 0 I 21 e canFam3.chr1 102921345 36357 + 122678785 I e rheMac3.chrUn_JH290802 40821 29625 + 40826 T a score=5700.000000 s hg38.chr19_GL949747v2_alt 403724 23 + 729520 TGAAAAATTCTAATGGTTTATTA s panTro4.chr19 59691116 23 + 63644993 TGAACAATTCTAATGGTTTATTA i panTro4.chr19 C 0 T 34541 s ponAbe2.chr19 56647109 23 + 60714840 TGAAAAATTCTCATGGTTTATTA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47708393 22 + 51301725 aggaaaattaGACTGACTTTTT- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e chlSab2.chr6 47389208 21 + 50890351 I e rheMac3.chrUn_JH290802 40821 29625 + 40826 T a score=19205.000000 s hg38.chr19_GL949747v2_alt 403747 26 + 729520 GTCACAATGACTCCGAAAACATTAAT s panTro4.chr19 59656598 26 + 63644993 GTCACAATTACTCTGATAATGTTAAT i panTro4.chr19 T 34541 C 0 s ponAbe2.chr19 56647132 26 + 60714840 GTCACAATTACTCTGAAAACCTTAAT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47708415 26 + 51301725 GTCACAATTACTCTGATAATGTTAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389229 26 + 50890351 GTCGCAATTACTCTGATAATGTTAAT i chlSab2.chr6 I 21 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e rheMac3.chrUn_JH290802 40821 29625 + 40826 T a score=25947.000000 s hg38.chr19_GL949747v2_alt 403773 23 + 729520 AATACCTATTAGATACTTTGCAT s panTro4.chr19 59656624 23 + 63644993 AATACCTCTTAGATATTTTGCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647158 23 + 60714840 AATACCTATTAGATATTTTGCAT i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 11196 23 + 40826 aaTACTTGTTAGATATTTTGCAT i rheMac3.chrUn_JH290802 T 29625 C 0 s papAnu2.chr19 47708441 23 + 51301725 AGTATCTGTTAGATATTTTGCAC i papAnu2.chr19 C 0 T 15746 s chlSab2.chr6 47389255 23 + 50890351 AGTATCTGTTAGATATTTTGCAC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I a score=46366.000000 s hg38.chr19_GL949747v2_alt 403796 43 + 729520 ATTACACAGGAAGAAGAGTTTGAATCTCAGATAAAAACAAAAA s panTro4.chr19 59656647 43 + 63644993 ATTACACATGAAGAAGAGTTTGAATCTCAGATAAAAACAAAAA i panTro4.chr19 C 0 I 34541 s ponAbe2.chr19 56647181 40 + 60714840 ATTACACAGGAAGAAGAGTTTGCATCTCAGATAAAAACAA--- i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 11219 43 + 40826 ATTACACATGAAGAAGAGTTTGAATCTCAGATAAAAACAACAA i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47692718 40 + 51301725 atagCACATGGAGAAGAGTTTGaatctcagaagaaaacaa--- i papAnu2.chr19 T 15746 C 0 s chlSab2.chr6 47389278 43 + 50890351 ATTACACATGAAGAAGAGTTTGAATCTCAGATAAAAACAACAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I a score=11297.000000 s hg38.chr19_GL949747v2_alt 403839 24 + 729520 AAATACATGAAAAGTCTTTCATGT s panTro4.chr19 59691231 24 + 63644993 AAATACATGAAAAGTCTTTCATGT i panTro4.chr19 I 34541 C 0 s rheMac3.chrUn_JH290802 11262 24 + 40826 AAGTACATCAAAAGTCTTTAATGT i rheMac3.chrUn_JH290802 C 0 I 15 s chlSab2.chr6 47389321 24 + 50890351 AAATACATCAAAAGTCTTTAATGT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e ponAbe2.chr19 56647221 0 + 60714840 C e papAnu2.chr19 47692758 0 + 51301725 C a score=1869.000000 s hg38.chr19_GL949747v2_alt 403863 22 + 729520 TAGCACAGATTTTAGGCATCTC s panTro4.chr19 59691255 22 + 63644993 TAGCACAGATTTTAGTCATCTC i panTro4.chr19 C 0 I 11308 e canFam3.chr1 102921345 36357 + 122678785 I e ponAbe2.chr19 56647221 0 + 60714840 C e chlSab2.chr6 47389345 0 + 50890351 C e papAnu2.chr19 47692758 0 + 51301725 C e rheMac3.chrUn_JH290802 11286 15 + 40826 I a score=0.000000 s hg38.chr19_GL949747v2_alt 403885 9 + 729520 GTGTTCGGA e canFam3.chr1 102921345 36357 + 122678785 I e ponAbe2.chr19 56647221 0 + 60714840 C e chlSab2.chr6 47389345 0 + 50890351 C e papAnu2.chr19 47692758 0 + 51301725 C e rheMac3.chrUn_JH290802 11286 15 + 40826 I e panTro4.chr19 59691277 11308 + 63644993 I a score=17529.000000 s hg38.chr19_GL949747v2_alt 403894 43 + 729520 TAAAAATACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGG s panTro4.chr19 59702585 43 + 63644993 TAAAAATACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGT i panTro4.chr19 I 11308 C 0 s ponAbe2.chr19 56647221 43 + 60714840 TAAAAATACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47692758 43 + 51301725 caaaaatacgtCAAAAGTCTTTCATGTCAGCACAAAATTCAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389345 15 + 50890351 ----------------------------AACCCAGAATTCCAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e rheMac3.chrUn_JH290802 11286 15 + 40826 I a score=16490.000000 s hg38.chr19_GL949747v2_alt 403937 18 + 729520 CATCTTGTGTTCGGGAGG s panTro4.chr19 59702628 18 + 63644993 CATCTCGTGTTCAGGAGG i panTro4.chr19 C 0 T 45901 s ponAbe2.chr19 56647264 18 + 60714840 CATCTCGTGTTCGGGAGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 11301 18 + 40826 CATCTTGTGTTCAAAAGA i rheMac3.chrUn_JH290802 I 15 C 0 s papAnu2.chr19 47692801 18 + 51301725 CATCTCCTGTATGAGAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389360 18 + 50890351 CATCTTGTGTTGGAAAGA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I a score=216907.000000 s hg38.chr19_GL949747v2_alt 403955 201 + 729520 TTGGATCTGAGACGTGTTGTGAGT-TGGTCATAGTGAAGGACGTGAGGTGCCAATTCTAGTGAGAACAATTTCCAGGAAGCCGTGTTCCGCTCTTGAGCAAGCATCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTAGTCAACATGTAAGCTGCATGGGCAGGGCGCCAAATAACAT s panTro4.chr19 59656745 202 + 63644993 TTGGATCTGAGACGTCTTTTGAGTCTGGTCATAGTGAAGGACGCAAGGTGTCAATTCTAGTGAGAACAATTTCCAGGAAGCCATGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAGCATGTAAACTGCATGGGCAGGGCGCCAAAAAACAT i panTro4.chr19 T 45901 C 0 s ponAbe2.chr19 56647282 201 + 60714840 TTGGATCCGAGACGTGTTTTGAGA-TGGTCATAGTGAAGGACGCGAGGTGTGAATTCTAGTGAGAACAATTTCCAGGAAGCCATGTTCCGTTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTATGTCAGCCTCCCATGATGTGGTCAGCATGTAAACTGCATGGGCAGGGCGCCAAATAACAT i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 11319 192 + 40826 TTGGATCTGAGACGTGTTTTGAGC-TGGTCATAGTGAATGACGCAAGGTG---------GTCACAACAATTTCCAGGAAGCCATTTTCTGCTCTTGGCTGGAGGCCCGCTGGGCATCATGTAACGTAGAAACAGCCTGCATACGTCACCCTCCCATGATGTGGTCGGCATGTCAACTGCATGGGCAGAGCGCCACATAACAT i rheMac3.chrUn_JH290802 C 0 I 3 s papAnu2.chr19 47692819 196 + 51301725 TTGGATCTGAGACGTGTTTTGAGT-TGGTAATAGTGAAGGATGCAAGGTGCCAATTCTAGTTGGAACAATTTCCAGGAAGCCATGTTCCACTCTTGAGCAAACACCCACTGGGCCTCATGCAAGGCAGAAAGAGCCTGCGTACGTCATCCTCTCATGATGTGGTCAGCATGTAAACTGCAT-----GAGCCCCTCACAACAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389378 201 + 50890351 TTGGATCTGAGACGTGTTTTGAGC-TGGTCATAGTGAATGAAGCAAGGTGGCAATTGTAGTCACAACAATTTCCAGGAAGCCATTTTCTGCTCTTGGCTGGAGGCCCGCTGGGCGTCATGCAAGGTAGGAAGAGCCTGTGTACGTCACCCTCCCATGATGTGGTCAGCACGTCAACTGCATGGGCAGGGCGCCAGATAACAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I a score=73603.000000 s hg38.chr19_GL949747v2_alt 404156 82 + 729520 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGC s panTro4.chr19 59656947 82 + 63644993 CCTGTGCGCTGCTGAGCTGAGCTGGGGCACGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647483 82 + 60714840 CCTGTGCGCTGCTGAGCTGAGCTGGGGCACAGCCGCCTGTCTGCACAGAGAGCACCATGTCGCTCATGGTCGTCAGCATGGT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47693015 82 + 51301725 CCTGTGTGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389579 82 + 50890351 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGCCGCTCATGGTCATCAGCGTGGC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=33203.000000 s hg38.chr19_GL949747v2_alt 404238 27 + 729520 GTGTGTTGGTGAGTCCTGGAAAGGAAT s panTro4.chr19 59657029 27 + 63644993 GTGTGTTGGTGAGTCCTGGAAGGGAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647565 27 + 60714840 GTGTGTTGGTGAGTCCTGGAAAGGAAT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47693097 27 + 51301725 GTGTGTTGGTGAGTCTCGGAAGGGAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389661 27 + 50890351 GTGTGTTGGTGAGTCCTGGAAGGGAAT i chlSab2.chr6 C 0 I 1418 s calJac3.chr22 45769230 27 + 49145316 GTGTCTGGGTGAGTCCTGGAAGGGAAA i calJac3.chr22 N 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=4333.000000 s hg38.chr19_GL949747v2_alt 404265 6 + 729520 AGAGGG s panTro4.chr19 59657056 6 + 63644993 CGAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647592 6 + 60714840 AGAGGG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47693124 6 + 51301725 CGAGGG i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45769257 6 + 49145316 GGAGGG i calJac3.chr22 C 0 I 808 e canFam3.chr1 102921345 36357 + 122678785 I e chlSab2.chr6 47389688 1418 + 50890351 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=546.000000 s hg38.chr19_GL949747v2_alt 404271 1 + 729520 A s panTro4.chr19 59657062 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647598 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47693130 1 + 51301725 A i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e calJac3.chr22 45769263 808 + 49145316 I e chlSab2.chr6 47389688 1418 + 50890351 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=4351.000000 s hg38.chr19_GL949747v2_alt 404272 7 + 729520 GGGAGTG s panTro4.chr19 59657063 7 + 63644993 GGGAGTG i panTro4.chr19 C 0 I 1107 s ponAbe2.chr19 56647599 7 + 60714840 GGGAGTG i ponAbe2.chr19 C 0 I 1400 s papAnu2.chr19 47693131 7 + 51301725 GGGAGCA i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45770071 7 + 49145316 GGGGGCT i calJac3.chr22 I 808 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e chlSab2.chr6 47389688 1418 + 50890351 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=1000.000000 s hg38.chr19_GL949747v2_alt 404279 1 + 729520 C s panTro4.chr19 59658177 1 + 63644993 C i panTro4.chr19 I 1107 C 0 s ponAbe2.chr19 56649006 1 + 60714840 C i ponAbe2.chr19 I 1400 C 0 s papAnu2.chr19 47693138 1 + 51301725 C i papAnu2.chr19 C 0 I 1164 s calJac3.chr22 45770078 1 + 49145316 C i calJac3.chr22 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e chlSab2.chr6 47389688 1418 + 50890351 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=3332.000000 s hg38.chr19_GL949747v2_alt 404280 4 + 729520 CACA s panTro4.chr19 59658178 4 + 63644993 CACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56649007 4 + 60714840 CACG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47694303 4 + 51301725 CACA i papAnu2.chr19 I 1164 C 0 s calJac3.chr22 45770079 4 + 49145316 CACA i calJac3.chr22 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e chlSab2.chr6 47389688 1418 + 50890351 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=20920.000000 s hg38.chr19_GL949747v2_alt 404284 23 + 729520 TCCTCCTCTCT-AAGGTGGCGCCT s panTro4.chr19 59658182 23 + 63644993 TCTTCCTGTCT-AAGGCGGCGCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56649011 23 + 60714840 TCCTCCTCTCT-AAGGCGGCACCT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47694307 24 + 51301725 TCCTCCTCTCTAAAGGCTGTGCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47391106 23 + 50890351 TCCTCCTCTCT-AAGGTGGCACCT i chlSab2.chr6 I 1418 C 0 s calJac3.chr22 45770083 22 + 49145316 CTCCCCTCTCT--AGGCTGCGCCT i calJac3.chr22 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=311321.000000 s hg38.chr19_GL949747v2_alt 404307 315 + 729520 CCTTCTCCCCCAGGTGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCCCTGTGGTGTCTGAAGGAGAACATGTGGCTCTTCAGTGTCGCTCTCGTCTTGGGTTTAACGAATTCAGTCTGTCCAAAGAAGACGGGAT---GCCTGTCCCTGAGCTCTACAACAGAGTATTCCGAAACACCGTTTTCATAGGCCCTGTGACCCCAGCACATGCAGGGACC--TACAGATGTCGGGGTTC--ACACCCACACTTCCTCACTGGGTGGTCAGCA---CCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAGAGGGCTCCTGTC s panTro4.chr19 59658205 315 + 63644993 CCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCGCTGTGGTGTCTGAAGGAGAATATGTGACTCTTCAGTGTCGCTCTCGTCTTGGGTTTAACGAATTCAGTCTGTCCAAAGAAGACGGGAT---GCCTGTCCCTGAGCTCTACAACAGAGTATTCCGGAACAGCCTTTTCATGGGCCCTGTGACCCCAGCACATGCAGGGACC--TACAGATGTCGGGGTTC--ACACCCACACTTCCTCACTGGGTGGTCGGCA---CCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAGAGGGCTCCTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56649034 312 + 60714840 CCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCTGCCTGGTCCAGCCTTGTGGTGCCTCCAGG---ACATGTGATTCTTCAGTGTCACTCTTATCTTAGGTTTAACAACTTCAGTCTCTACAGGGAGGATGGGGT---GCCTGTCCCTGAGCTCTACAACAGAATATTCTGGAACAGCCTTTTCATGGGCCCTGTGACCTCAGCACAAGCAGGGACC--TACAGATATCAGGGTTC--ACACCCACACCCCCCCAGTGGGTGGTCGGCA---TCCAGCAACCCCCTGGTGATCATGGTCACAGTTCAGAGGGCTCCTGTC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47694331 315 + 51301725 CCTTCTCCCCCAGATGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCGCCGTGGTGCCTCAAGGAGAACACGTGAGTCTTCAGTGTCACTCTCATCTTGGGTTTACCATCTTCAGTCTGTACAAGGAAGATGGGGT---GCCTACCCCTGAGCTCTACAACAGAAGATTCTGGAAGGACATCCTCCTGGGCCCTGTGACCTCGGCACACGCAGGGACC--TACAGATGTCGGGGTTC--ACACCTGAACTCCCCCACTGAGTGGTCGGCT---CCCAGCAACCCCCTGGTGATCACGGTCACAGGTCAGAGGGCTCCTGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47391129 309 + 50890351 CCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTTGGCCTGGACCAGCCCTGTGATGTCTCCAGG-----ACGTGACTCTTTGGTGTCACTCTTATCTTGGGTTTAACAACGTCAGTCTGTACAAGGAAGATGGGGT---GCCTGTTCCTGAGCCCTACAACAGAATATTCTGGAACAGCTTCCTCATGGGCACTTTGATCCC-ACACATGCAGGGACC--TACAGATGTCCGGGTTC--ACACCCACAATCCCCCAAAGGGTGGTCGCCT---CCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAGAGGGCTCCTGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45770105 312 + 49145316 CCTCCTCTTCCAGGTGCTCTGTACAAACTCTCCCTGTCAGCCCGGCCGAGCCCTGTGGTTCCCCAGGGAGGACGTGTGACTCTCTCCTGTGATTCTCATCTTCGGTTTGTCACATTCAAAATATACAAAACATCTGGGAC---CCAGGACCGTGAGCTGCAC-ACTGGCCGTTCC--AATGACTTCACCATCAACCCTGTGACCCCAGGACATGCAGGGACC--TACAGATGTTCTGGATCTTTCAGCCGCACCTCAC-----AGTGGTCAGCTGTGCACAGCAACTCCCTGATGCTATTGGTCACAGGTAGGAGAAGTCCAGCC i calJac3.chr22 C 0 I 914 s canFam3.chr1 102957702 310 + 122678785 CCCTTCCATGCAGGTGCCTACAGGGAGCCCTCCCTCTCAGCTCAGCCAGGCTCATTGGTTCATTCTGGAGACAACCTGACCCTGCAGTGTCACTCAGAAGCTGGCTTTGATAGATTCGCTCTGACCAAGGATGAGGAGCTCAGACCTGCCC---AGCATCTGGATGGTCAACCCAGCCCCGACTTCCCCCTGGACCCTGTGAGCC--GCACCCACGGGGGCCGGTACAGGTGCTACAGTGG--ACACAACCTCTCCTCCAC---GTGGTCAGCA---CCCAGTGCCCCTCTGGACATCCTGATCACAGGTGAGAAGCCCCCTG-- i canFam3.chr1 I 36357 C 0 e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=24631.000000 s hg38.chr19_GL949747v2_alt 404622 27 + 729520 TGGGATTCTCCTTGTCCCACCTCCTGA s panTro4.chr19 59658520 27 + 63644993 TGGGATGCTCCTTGTCCCACCTCCTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56649346 27 + 60714840 TGGCATTCTCTTTGTCCCACCTCCTGA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47694646 27 + 51301725 TGGGCTTCTCCTTGTCCCAACTCCTGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47391438 27 + 50890351 TGGGCTTCTCCTTGTCCCACCTCCCGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102958012 20 + 122678785 -------CCCCATGTCCTGTCTGCTGA i canFam3.chr1 C 0 I 4 e calJac3.chr22 45770417 914 + 49145316 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=452316.000000 s hg38.chr19_GL949747v2_alt 404649 600 + 729520 GTCCCAGAGCTTCTGGTGGGAGTGTCCACCAGCGTCCCATCATCCAGACCCTAACTGTATTTGGGGTAAAAGGGGATTGAATACAGGGAAATGGGTGCtgtggtggaaagaataattgtccccaatgatgactgcattctaatccctgcagtctgtgactatttatgttataggggaaggcactgaaggggaagatggagctcaggttgttga---gttgaccttgagatggggagacagcctggactgtcctgctgggctcagtgtaatcacaagggtgcacatgagaggagaaggaagaggggagtggcgattagagcagtgcaatggaagt------ctccatcagctttgaaggtggaggaaggccatgagccatgaatgcaggtggcctatagaggctggaaaagtcaa-ggaactgattct--cctgggtctccagagggaacgcagccctgcagatgccttgattttagccctcaaaaaacagggtccgatttctg-tctccagaaacggaaggggtcagtgtgctctctcctgctgccatgcttctgataattttccacagcaccaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGAT s panTro4.chr19 59658547 603 + 63644993 GTCCCAGAGCTTCTGGTGGGGGTGTCCACCAGCGTCCCATCATCCAGACCCTAACTGTATTTGGGGTAAAGGGGGATTGAATGCAGGGAAATGGCTGCtgtggtgggaagaataattgtccccagtgatgactacattctaatccctggagtctgtgactatttatgttataagggaagggacagaaggggaagatggagctcaggttgttgattagttgaccttgagatggggagatggcctggactgtcccagtgggctcagtgtaatcacaagtgtccacatgaaaggaggaggaagaggggagtggggattagagcagcataatgggaga------ctcagtcagctttgaaggtggaggaaggccatgagccatgaatgcaggtggcctatagaggctggaaaagtcaa-ggaactgattct--cctgagtctccagagggaacacagccctgcagatgccttgattttagcccaggaaaaacagggtccgatttctg-tctccagaattggaaggggtcagtgtgctctctcctgctgccatgcttctgataattttctacagcagcaacaggaaaccaacacTGGAACCCAGCTCAAGGACAAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56649373 603 + 60714840 ATCCCAGAGCTTCTGGTGGGCGTGTCCTTGAGGGTCCCATCACCCAGGCCCTGACTGTATTTGGGTTAAAGGTGGATTGAATACAGGGAAATGGGTGCtgtggtgggaagaataattgtccccagtgataactgcattctaatccctggagtctgtgactatttatgttataggggaagggactgcaggggaagatggagctcaggttgttgatgagttaaccttgagatggggagacagcctggactgtcccgctggggtcagtgtaatcacaagggtccacatgaaaggaggaggaagaggggagtggggattagagcagcgtaatgacagt------ctccatcagctttgaaggtggaggaaggccacgagccatgaatccaggtggcctatagaggctggaaaagtcaa-ggaactgattct--cctgagtctccagagggaacaaagccctgcagatgtcttgattttagcccaggaaaaacagggtccaatttctg-tctccagaagtggaagaggtcagtgtgttctctcctgctgccatgcttctgataattttctacagcagcaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGTT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47694673 612 + 51301725 ATCCCCGAGCTTCTGCTGGGGGTGTCCACCAGGGTCCCATCACCCAGGACCTGACTGTATTTGGGGTAAAGGGGGATTCAGTACAGAAAAATAGGTACTGTGATGGGAAGAAAAATTGTCCCTAGTTATGGCTACATGATAATCCGTGGACCCTATGACTGTTTATGTTATAGGGCAGAGGACTGAAGGGGAAGATGGAGCTCAGGTTGTTGATGAGTtgaccttgagatggggagacGACCTGGACTGTCCCGCTGGGCTCAGTGGAATCACAAGGCACCACatgagaggaggaggatgaggagagtGGGGATTAGAGCAGCATAGTGGGAGGGAGACTCACTACAGGCTTTGAAGGTGAAGGAAGGCCACGAGCCATGAAGGCAGGTGGCCTCTAAGGGCTGGAGAAGTCAAGGGAACTGATTCT-CCCTGAGTCTCCAGTGGAAGCACAGCCCTGCAGATGCCTTGGTTTTAGCCCAGAGAGAACTGGGTCAGATTTCTGTTCTCCATAAGTGGAAGGGGTTATTGTATTCTCTCCTGCTACCATGTTTGTGATAATTTtctacagcagcaacaggaaaccaacacaggaacTCAGGTCAAGGACAAGTT i papAnu2.chr19 C 0 I 17666 s chlSab2.chr6 47391465 605 + 50890351 ACCCCAGAGCTTCTGCTGGGGGTGTCCGTCAGGATTTGGTCACCCAGGCCCTGACTTTATTTGGGGTGAAGGGGGATTGAATACATGGAGATCGGTGCtgtgatgggaagaataactgtccccaatgatggctacattctaatccctggagcctgtgactatttatgctatagggcaggggactgaaggagaagacggagctctggttgttgatgagttaaccttgagatggggagatggcctgaactgtcccgctgggctcagtggaatcacaagggaccacacgagaggagaaggaggagggcagtggggattagagcagcatagtgggaga------ctccatctgctctgaaggtgtaggaagcccatgggccaccaatgcaggtgacctatagaggctgaaaaagtcaa-ggaactgattctcccctgagactccagagggaacgcagccctgcagatgccttgattttagcccaggaaaaacagggtccgatttctg-tctccagaagtggaaggggtcagtgtgttctctcctgctgccttgcttctgataattttctacagcggcaacaggaaaccaacacTGGAATCCAGGTCATGGACAAGTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958032 4 + 122678785 I e calJac3.chr22 45770417 914 + 49145316 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=142597.000000 s hg38.chr19_GL949747v2_alt 405249 186 + 729520 AAGAAAGGACACAAGGAtagccgggcgtggtggcaggtgcatgtaatcctagcaactcaggaggctgagggcaggagaatcacttgaacccaggagacagaggttgcagtgagcctagaccacaccacttcactccagcctgggtgaaggagtgagactctgactccaaaaTTAATTAATTAATTA s panTro4.chr19 59659150 186 + 63644993 AAGAAAGGACACAAGGAtagccaggcatggtggcaggtgcatgtaatcctagcgactcgggaggctgagggcaggagaatcagttgaacccaggaggcagacgttgcagtgagcctagaccacaccacttcactccagcctgggcgaaggagtgagactctgtctctaaaaTTAATTAATTAATTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56649976 186 + 60714840 AAGAAACGACACAAGGAtagctgggcatggtggcaggcccatgtaatgctagtgactcgggaggctgggggcaggagaatcacttgaacccaggagacagaggttgcagggagcctagaccacaccacttcactccagcctgggcaaaggagtgagactctgtctccaaaaTTAATTAATTAATTA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47712951 185 + 51301725 AAGAAACGGCCCAAggatagccgggcgtggtcgcaGGCGCATGTAATCttagcgactcgggaggctga-ggcaggagaatcgcttaaacccaggaagcagaggttacagtaagctgagaccacaccacttcactccagcctgggcgaaggagtgagactctctctccaaaattaattaattaatta i papAnu2.chr19 I 17666 T 17851 s chlSab2.chr6 47392070 180 + 50890351 AAGAAGTGGCCCAAGGAtagccgggcgtggtcgcaggcacatgtaatcctagtgactcgggaggctga-ggcaggagaatcgcttaaacccaggaggcagaggttgcagtaaaccgagaccacacctcttcactccagcctgggcaaaggagt--gactctgtctccaaaaTTAATTAATTAA--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958032 4 + 122678785 I e calJac3.chr22 45770417 914 + 49145316 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=299952.000000 s hg38.chr19_GL949747v2_alt 405435 408 + 729520 AagaaaccaaacaaagagaaggttggctacaccgagatcagcaagggtgggatgatgatgccaccaccaggctccatccacatagggaggggttgatactcctcaaaccagcaccagaagccagcctatggaagctggcaccaTGGAGAAGGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATACCTTCTGCCAAGGATTCCAAATCGTCCAAAAGAGATTGAACCAGTCTGCTAAGAGCCTGGACGTGCAGCCTATCCTGGTTCCTCTTCCACCCCCACATAGA-AGCAGGAAAGACATTAGTTCGAAATAGATACAACAGCCCAAGAGATGAGGCTGAGCCCAGCGGCAAGGGAA s panTro4.chr19 59659336 394 + 63644993 Aagaaaccaaacaaggagaaggttggctaccctgagatcagcaagggtgggatgatgatgccaccaccaggctccatccacatagggaggggttgataatcctccaaccagcaccaggagccagcctatggaagctggcac--------------aggcatggcaagagtggctcccagTCCCCACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATTCATCCAAAAGAGATTGAACCAGTCTGCTAAGAGCCTGGACATGCAGCCAATCCTGGTTCCTCTTCCACCCCCACATAGA-AGCAGGAAAGACATTAGTTCGAAATAGATACAACAGCCCAAGAGATGAGGCTGAGCCCAGCGGCAAGGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56650162 409 + 60714840 AagaaaccaaacaagtagaaggttggttaccctgagatcagcaagggtgggatgatgatgccaccaccaggctccatccacatagggaggggttgaaactcctcaaaccagcaccaggagccagcctatggaagctggcaccatggagAAGGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCCACCAGGAACAGGCTGTGTGGACACTGCTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATTCATCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGATGTGCAGCCTATCCTGGTTCCTCTTCCACCCCCACACAGACAGCAGGAAAGACATTAGTGTGAAATACATACAACAGCCCAAGAGATCAGGCTGAGCCCAGCAGGAAGGGAA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47695285 402 + 51301725 AAGAAACCAAACAAGGAGAAGGTTGGCTACACTGATTTCAGCACAGGTGGAATACTGTTGCTACCACCAGGCTTGATCCACACAGGGAGGGGTTGATTCTCCTGGAACCAGCACCAGGGGCCACCCTATGGCAGCTGGGACCATGGAAAAGGCACAGACTTGGCAGGAGAGGCTCCCAACCCCCATCAGGAACAG-------GGACATTGATGCCTGCCTTACTGATGAGTTCACACCTCCCGCCAGTCATTCCAATTTGTCCAAAAGAGATTGATTCAAGCTGCTGAGAGCCTGGACGTGCAGCCTGTCATGGTTCCTCTTCCAGCCCCACATAAACACCAGCAAAGAGATTAGTGGGAAACAGATACAACAGCCTAAGAGATGACACTGAGCCCAGTgggaagggaa i papAnu2.chr19 T 17851 C 0 s chlSab2.chr6 47392250 408 + 50890351 -agaagccaaacaaggaaaaggttttcaaccccgagatcagcaagggcaggacgctgataccatcaccaggttcgatccacatagggaggggctgatagtcctcgaaccagcaccaggaaccaccctatggaagctgtcaccatggagaaggcacagagatggcaagagcggctcccaatccccaccagaaacagggagtgtggacactggtgcctgccttactgatcagttcatacttcctgccaaggactccaatgtgtccaaaagagattgaaccgggctgctaagagcctggacatgcagcctgTCTTGGTTCCTCTTCCACCCCCACGTAGACAGCCGGAAAGAGATTAGTGCGAAATAGATACAGCAGCCCAAGAGATGAGGCTGAGCCCAGTGGGAAGGGAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958032 4 + 122678785 I e calJac3.chr22 45770417 914 + 49145316 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=43289.000000 s hg38.chr19_GL949747v2_alt 405843 55 + 729520 TCAGGAGCTACTa--------gagacagagggacagagaagaggg--agggagacagaTGGAAGG---- s panTro4.chr19 59659730 55 + 63644993 TCAGAGGCTACTA--------GAGACAGAGGGACAGAGAAGAGGG--AGGGAGACAGATGGAAGG---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56650571 54 + 60714840 TCAGAGGCTACTA--------GAGACAG-GGGACAGAGAAGACGG--AGGGAGACAGATGGAAGG---- i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47695687 54 + 51301725 tcagggg-tccta--------gagacagagagacagggaagaggg--agggagacagatggaggg---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47392658 55 + 50890351 TCATGGGCTACTa--------gagacagagagacagagaagaggg--agggagacagaTGGAAGG---- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102958036 69 + 122678785 TCAGGGGCCACTGTCACCCCTGGGTGATGGGGTCCGGGGAGAGGGTCAGGAGCACAGGCTGAGATGGGG i canFam3.chr1 I 4 C 0 e calJac3.chr22 45770417 914 + 49145316 I e rheMac3.chrUn_JH290802 11511 3 + 40826 I a score=79836.000000 s hg38.chr19_GL949747v2_alt 405898 73 + 729520 ACCTGTACCAGGAGTTATGGGCACAGAAAAGAACATGAAGA--CACAGAGAGGAAGG----------AGAGAGATA--AGACACCAG s panTro4.chr19 59659785 73 + 63644993 ACCTGCACCAGGAGTTATGGGCACAGAAAAGAACATGAAGA--CACAGAGAGGAAGG----------AGAGAGATA--AGACACCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56650625 72 + 60714840 ACCTGCACCAGGAGTTATGGGCACAGAAAAGAACATGAAGA--CACAGAGAGGAAGG----------AGAGAGAC---AGACACCAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 11514 71 + 40826 ACCTGCAACAGGGGTTATGGGCACAGAAAAGAACACGGAGA--CACAGAGGAGGAGG----------AGAGAGAC---AGAC-CCGG i rheMac3.chrUn_JH290802 I 3 C 0 s papAnu2.chr19 47695741 72 + 51301725 ACCTGCACCAGGGGTTATGGGTACAGaaaaaaaCATGGAGA--CACAGACAGGGAGG----------AGAGAGAT---GGACACCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47392713 72 + 50890351 ACCTGCACCGGGAGTTAAGGGCACAGAAAAGAACATGGAGA--CACAGAGAGGAAGG----------AGAGAGAC---AGACACCAG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102958105 85 + 122678785 CCATGTTCTAGGGA-CAGGGGCTGAAAAATGGCCGGTGAGGGTCATGGAGATGAAGGACATCCACTCAGAGAGACAAGAGGAGCTG- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45770417 914 + 49145316 I a score=298006.000000 s hg38.chr19_GL949747v2_alt 405971 206 + 729520 CGAGGGGAAGCCTCACTCATTCTA---------------GGTGCCATGGATGGGAT-GA---------TAAAGAGAGATGCCTTCTAAAGTCACAACCTCTCTT---CCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAGATGTCATGTTTGAGCACTTCCTTCTGCACAGAGAGGGG s panTro4.chr19 59659858 206 + 63644993 CGAGGGGAAGCCTCACTCATTCTA---------------GGTGCCATGGATGGGAT-GA---------TAAAGAGAGACACCTTCTAAACTCACAATCTCTCTT---CCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAGATGTCATGTTTGAGCACTTCCTTCTGCACAGAGAGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56650697 206 + 60714840 TGAGGGGAAGCCTCACTCATTCTA---------------GGTGCAATGGATGGGAT-GA---------TAAAGAGAGACGCCTTCTAAACTCACAACCTCTCTT---CCTAGGAGTCCACAGAAAACCCTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAGATGTCAAGTTTGAGCACTTCCTTCTGCACAGAGAGGAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 11585 206 + 40826 GGAGGGGAAGCCTCACTGATTCCA---------------GGTCCCATGGATGGGAT-GA---------CAAACAGAAACGCCTTCTAAACTCACAACCTCTCTT---TCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCGCTGGTGAAATCAGGAGAGACGGTCGTCCTGCAATGTTGGTCAGATACCGTGTTTGAGCACTTCTTTCTGCACAGAGAGGGG i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47695813 206 + 51301725 GGAGGGGAAGCCTCACTTATTCCA---------------GGTCCCATGAATGGGAT-GA---------GAAAGGGAGACGCCATCTGAACTCACAACCTCTCTT---CTTAGGAGTCTACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGGAGAGACAGTCATCCTGCAATGTTGGTCAGATATGAGGTTTGAGCATTTCCTTCTGCACAGAGAGGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47392785 207 + 50890351 GGAGGGGAACCCTCCCTCATTCTG---------------GATCCTGTGGATGAGATAAA---------AAAAGAGAGACGCCTTCTAAACTCACAAATTCTCTT---TCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAGTGCTGGTCAGATATCAAGTTTGAGCACTTCCTTCTGCACCGAGTGGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771331 202 + 49145316 CGAGGGAGAGCTTCACCC---TGA---------------GGTCCCAGGTGAGGGGT-GA---------GGAAG-GAGACCCCTGTGAATTCCTCTGTCTTTGCT---CCCAGGTGCATTCACAAAACCTTCCATCTCAGCCCACCCAAGCTCCCTGGTGGCTGCGGGAGTTAGGGTGACCGTGAGCTGTCACTCGGAGCTGGCATTTGATGAGTTTATCTTATACAAAGATGGG i calJac3.chr22 I 914 I 55 s canFam3.chr1 102958190 233 + 122678785 AGAGGGGGTCCCACACAGAGTCTCTGGAGAGACGAAGGTGGTCCCCCAGCTGGGTC-AAGGGCATATGTGGAGAGGCAGGCCTCTACACATCACGACCTTCCTTTTCCCCAGGAATATACCCAAAACCATCCCTCTCAGCCCAGCCTGGGCCTTCAGTATCCTGGGGAGAGAATGTGACCCTGCAGTGTCGCTCTGAGATCTGGTTCAATACCTTCCACCTGTCCAAGGAGGGG i canFam3.chr1 C 0 C 0 a score=36173.000000 s hg38.chr19_GL949747v2_alt 406177 49 + 729520 ACGTTTAATGACACTTTGCGCCTCACTGGAG-----AGCTCCATGATGGGGTCT------ s panTro4.chr19 59660064 49 + 63644993 ATGTTTAACGACACTTTGCGCCTCATTGGAG-----AGCACCATGATGGGGTCT------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56650903 49 + 60714840 AAGGTTGAGGACACTTTGCGCCTCACTGGAG-----AGCTCCATGATGGGTTCT------ i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 11791 48 + 40826 ATCTCTGAGGACCCC-TATGCCTCGTTGGAG-----AGCTCCATGATGGGGGCT------ i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47696019 49 + 51301725 ATCACTGAGGACCCCTTGCACCTCATTGGAC-----AGCTCCATGATGGGGGTT------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47392992 49 + 50890351 AAGCTTGAGGAGCCCTTGCGTCTCATCGGAG-----AGCTCCATGACGGGGGCT------ i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102958423 49 + 122678785 -----------TCCCTTGCTCCTCCCCAGCACCTTCATCTGCAGGATACAGCTATACCGT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45771533 55 + 49145316 I a score=228361.000000 s hg38.chr19_GL949747v2_alt 406226 136 + 729520 CCAAGGCCAACTTCTCCATCGGTCGCATGACGCAAGACCTTGCAGGGACCTACAGATGCTACGGTTCTGTTCCTCATTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCTCTGGACATCGTGATTACAGGTGAGAG s panTro4.chr19 59660113 136 + 63644993 CCAAGGCCAACTTCCCCATCGGTCGCATGACGCAAGACCTGGCAGGGACCTACAGATGCTACGGTTCTCTTACTCACTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCACAGGTGAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56650952 136 + 60714840 CCAAGGCCAACTTCTCCATCGGTCCCATGACGCCTGCCCTTGCAGGGACCTACAGATGCTATGGTTCTGTTACGCATTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCACAGGTAATAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 11839 136 + 40826 CCAAGGCCAACGTCTCCATGGGTCCCATGACGCCTGCCCTTGCAGGGACCTACCAATGCTATGGTTCTTTTACTCACTCCCCCTATGAATGGTCAGTCCCCAGTGACCCCCTGGACATCGTGATCACAGGTGAGAG i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47696068 136 + 51301725 CCCAGGCCAACTATTCCGTGGGTCCCATGATGCCTGCCCTTGCAGGGACCTACAGATGTTTTGGTTCTGTCGCTCACTCCCCCTATGAGTGGTCAGCTCCCAGTGATCCACTGGACATCGTGATCATAGGTGAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47393041 136 + 50890351 CCAAGGCCAATGTCTCCATCAGTCCAGTGACACCTGCCCTGGCAGGGACCTACCAATGCTACGGTTCTTTTACTCACTCCCCCTATGAATGGTCAGCCCCCAGTGACCCCCTGGACATCGTGATCACAGGTGAGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771588 136 + 49145316 TCAAGGCTGTCTTTTGCCTGGGTCCTGTCACGCCGGCCCAGGCAGGAGCCTACAGATGCTGTGGTTCTTTCAGTCACTCCCGCTATGAGTGCTCGGCTCCCAGCGACCCCCTGGAGATTGTGATCACAGGTGAGTG i calJac3.chr22 I 55 C 0 s canFam3.chr1 102958472 136 + 122678785 ATGAGGTCAACTTCACCCTGAATCCTGTGACCTCAGACCACCAGGGGACCTACAGGTGCTACAGCTCACACAACTCCTCCCCCTACCTGTTGTCAAGTCCCAGTGACTCCCTGGAGCTCCTTGTCTCAGGTGAGAG i canFam3.chr1 C 0 I 15338 a score=12115.000000 s hg38.chr19_GL949747v2_alt 406362 9 + 729520 TGTCTGGAC s panTro4.chr19 59660249 9 + 63644993 TGTCCAGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56651088 9 + 60714840 TGTCCGGAC i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 11975 9 + 40826 TGTCCAGAC i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47696204 9 + 51301725 AATCCAGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47393177 9 + 50890351 TGTCCGGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771724 9 + 49145316 TGGCTGGAC i calJac3.chr22 C 0 I 627 e canFam3.chr1 102958608 15338 + 122678785 I a score=12634.000000 s hg38.chr19_GL949747v2_alt 406371 18 + 729520 ATTATTCTCATTGTCACT s panTro4.chr19 59660258 18 + 63644993 ATTCTTCTCATTTTCATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56651097 18 + 60714840 ATTCTTCTCATTGTCATT i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 11984 18 + 40826 ATTCTTCTCATTGACAGT i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47696213 18 + 51301725 CTGCCTCTCACCCTTGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47393186 18 + 50890351 CTTCTTCTCATTGTCACT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958608 15338 + 122678785 I e calJac3.chr22 45771733 627 + 49145316 I a score=218019.000000 s hg38.chr19_GL949747v2_alt 406389 191 + 729520 GGGACACAG---AGTGAATGATCCACGAC-TTGGAGGCCCAGGTGGTTATAAGGAAGATGAGCTTGGTATTCTTATGGAGAGAGACTAACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAAC--AGAGGACAGACACAGGGGCCATACAGGGAGTTA-GAAAAG s panTro4.chr19 59660276 191 + 63644993 GGGATGCAG---AGTGAATGATCCAGGAC-TTGGAGGCCCAGCTGGTTGTAAGGAAGATGAGCTTGGTATTCTTATGGAGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAAC--AGAGGACAGACACAGGGGCCATACAGGGAGTTA-GAAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56651115 191 + 60714840 GGGACGCAG---AGTGAATGATCCAGGAC-TTGGAGGCCCAGGTCATTGTAAGGAAGATGAGCTTGGTATTCTTAAGGAGCGAAACTGACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAAC--AGAGGACAGACACAGGGGCCATACAGGAAGTTA-GAAATG i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 12002 192 + 40826 GGGACACAG---AGTGAATGATCCAGGACTTGGAAGCCCCAGGGTGTCATGAGGAAGATGAGTGTGGCATTCTTATGGAGAGAGACTCACTTGGCGAGGTCTGTACCAACAGAGACAGAGAAATAGGAGACACAAGTACAGACCACGTGTCATAAC--AGAGGACAGACACAGGGGCCACACAGGGAGGTA-GAAAAG i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47696231 194 + 51301725 GGGACAGGG---AGTGAATGATCTGGGAC-TGGAAGCCCCAGGTGGTCATGAGGAAGATGAGTGTGGGATTCTCATGGAGAGAAAGTGACTTCATGAGGTCTGTACCAACAGAGGTAGAGAAACAGGAGACACAAGTACAGACCACACGTCATAACGTAGAAGCCAGACACAGGGACCATACAGCGTGTTAGGaaaag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47393204 191 + 50890351 GGGACACAG---AGTGAATGATCCTGGAC-TTGGAGGCCCAGGTGGTTGTAAGGAAAATGTGCATGGGATTCTTATGGAGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAGCAGGAGACACAAGCACAGACCAGGTGTCGTAAC--AGAGGACAGACACAGGGGCCATACAGGGAGGTA-GAAAAC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102973946 162 + 122678785 GGGCCACAGTGCAGGGAAAGCCCCAGACT-CTA----CACAGGTCCCTGTGAGGGA----AGCCCAG----CTGATGGTGGCCAACCTGGGAGGTGGGGTCT------------CCAGGGAGGGAAGAGACAGAAATACGGGATGAGG----------ATGGGAGAGACTCAGAGGACACAGAGAGATTCA-GGTCAG i canFam3.chr1 I 15338 n 15338 e calJac3.chr22 45771733 627 + 49145316 I a score=523366.000000 s hg38.chr19_GL949747v2_alt 406580 480 + 729520 ACAGAAAGAGTTAAAGGAGAC------ACAGACAGACATGTGCCAGAGAGAGGTGTCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACTTCCACAAAGTGTTCTCTACCAGAAGAACCCAAGGACACCCATATTTCTGGCCTGAGTTGGGCCCTGTGGCCTCAGGCCTTCTGGCACCTACAGATGCCGTGTTTATTCTGACACCTCTGCCTTCCATGCAATGGAGA-GTAATCGTCCCAGGATATCATGGCCC------------CAGAACATCAACCCCTGTATACTGTGTGAACTTGCGG-TCCCCAGACTGGATTCTGAGGCTCACATTCCAAATAACCCCACATATGAGAGGATCACT-----------------GAGAGACACAGAGAGAAATCAGGGACACCAAAAAGCAAAGACATAA--ACACACAGAGAATGAGCCAGAGGAAGGAGATTGAGAGACTCACAGACACATAAAGAGGGAGAA s panTro4.chr19 59660467 480 + 63644993 ACAGAAGGAGTTAAAGGAGAC----AGACAGACAGACATGTCCCAGAGAGAGGTGTCCCTCCATGCTGACTTTGCTCAGACACCTGGCACAGGTTAGAAGTTTCATTTGTGTTTTACCTCCACAAAGTGTTCTCTACCAGAAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCCGTGGCCTCAGGCCTTGTGGCACCTACAGATGTCGTGGTTATTCTGACACCTCTGCCTTCCATGCAATGGAGA-GTAATCGTCCCAGGATATCATGGCCC------------CAGAACACCAACCCCTGTATGCTGTGTGAACTTGTGG-TCTCCAGACTGGATTCTGAGGCTCACATTCCAAATAACCCCACATATGAGAGGATCACT-----------------Gagagacacagagagaaatcagggacaccaaaaaacaaagacagaa--acacacagagaaagagccagaggaaggagattgagagactcacagacacataaagagagag-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56651306 481 + 60714840 ACAGAAAGAGTTAAAGGAGAC----AGACAGACAG--ATGTCCCAGAGAGAGATATCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAAAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGGCATCTACAGATGCCATGTTTATTCTGACACCTCTGCCTTCCATGCAATGGAGA-GTAATCATCCCAGGATATCATGGCCC------------CAGAACACCAACCCCTGTATGCTGTGTGAACTTGGGGTTCCCCAGACTAGATTCTGAGGCTCACATTCCAAATAACCCCACATATGAGAGGATCACT-----------------GAGAGACACAGAGAGAAATCAGGGACGCCAAAAAGCAAAGACATAA--ACACACAGAGAATGAGCCAGAGGAAGGAGATTGAGAAACTCACAGACACATAAAGAGAGAGAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 12194 487 + 40826 AGAGAAAGAAGTAAAGGAGACACTCAGACAGACAGACACGTCCCAGAGAGAGGCGTCCTTCCGTGCTGACTTTGTTCAGAGACCTGGCACAGGTTAGAAACTTCATCTCTGTGTTACCTCCACAGAGTGATCTCTACCGGGAGAACCCAAGAGCACCCTTATTTCTCACCTTAGTTGGGCCCTGGGACCTCAGGCCTTGTGGCACCTACAGATGCCGTGTTCATTCTGACACCTCTGCCTCGTGTTCAGGGGAGCCGTAACCTTCTCACGATATCATGGCCC------------CAGAACACCAACCCCTGTGTGCTGTGTGTACTTGGGG-TCTCCAGACTGGATTCTGAGGCTCATATTCCAAACAACCACACATATGATAGGATTACT-----------------GACAGACACAGAGAGAAATCAGGGACATTAAAAAGCAAAGGCATAA--ACACACAGAGAATGAGCCAGAGGAAGGAGACTGACAAGCTCACAGCCACATAAAGACAGAGAA i rheMac3.chrUn_JH290802 C 0 I 509 s papAnu2.chr19 47696425 516 + 51301725 agataaagaggtaaagaagacacacagagagacagacatgtcccagagagagaTGTCCTTCCATGCTGACTTTGTTCAGAGACCAGGCACAGGTTAGAAGGTTCCATTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAAGAGACACGTCTATCTGGCCTGAGTTGGGCCTTGTGGCCCCAGG-CTTGTGGCACCTACAGATGCCATGTTTTTTCTTaaacctctgccttccatgcAGTGGAGCTGTCATCGTCCCAGGACACCATGGCCCCAGGTGAGGGAGCAGAACACCAACCCCTGTATGCTGTGAGTTCCTGGAG-TCCCCAGACTGGATTCTGAGGCTCATATT-CAAATAACACCACACGTTATAGGATTACTGAGAACAAAAGCCCACAGAGAGACATGGAGTGAAATCAGGGAAATCAAAAAGCgaagacatgaacacacacacagaatgagcCAGAAGAAGGGAATTGAGAGACTCACAGACacataaagagatagaa i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47393395 480 + 50890351 AGAGAAAGAGTTAAAGGGGACACCCAGACAGACAGACATGTCCCAGAGAGAGGCGTCCTTCCGTGCTGACTTTGTTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTGTTACCTCCACAATGTGTTCTCTACCAGGAGAACCCAAAGACACCCACATTTCTGACCTGAGTCAGCCCCTGTGGCCTCAGGCCTTGTGGCACCTACAGATGCCGTGTTGATTCTGACACCTCTGCCTTGTGTGCAGGAGAGA-GTCATCATTCCAGGATATCATGGCCC------------CAGAACACCAACCCCTGTATGCTGTGTGAACTTGGGG-TCCCCACACTGGATTCTGAGGCTCATATTCCAAATAACCCCACATATGATAGGATTGCT-----------------GAGAGACATAGAGAGAAATCAGGGACATCAAAAAGCAAAGGTGTAA----ACACACAGAATGAGCCAGTAGAAGGGGATTGAGAGACTCACAGACACATAAAGAGAA---- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102974108 15338 + 122678785 I e calJac3.chr22 45771733 627 + 49145316 I a score=249097.000000 s hg38.chr19_GL949747v2_alt 407060 244 + 729520 AAGAGGGCAGAGAAGTGGAGAGAACAATGGAAGGGAACAGAGAAAAGcactaaaattagagtcctgagggagagacacaaggacatagaaagatggagatgtgg-ggatgaattgcagagattcc-aaagagaactagagagaccgagaggcagagca----agacagat-------gatagatg----gatagatatagatagatgataaatagg---tagatgatagataat--------aggttaaagatacatagatgatgattgatt s panTro4.chr19 59660947 244 + 63644993 aagagggcagagaagtggagacaatgatggaagagagcagagaAAACcactaaaattagagtcctgagggcgaggcacaagggcatagaaagatggagatgtgg-ggatgaattgcagagattcc-aaagagaactagagaaaccgagaggcagagca----agacagat-------gatagatg----gatagatatagatagatgataaatagg---tagatgatagataat--------aggttatagatacatagatgatgattgatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56651787 244 + 60714840 AAGAGGGCAGAGAAGTGGCGAGAATGATGGAAGGGAGTAGAGAAAAGCACGAAAATTAGAGTCCTGAAGGAGAGGCACAAGGACTTAGAAAGATGGAGATGTGG-GGATGAATTGCAGAGATTCC-AAAGAGAACTAGAGAGACCGAGAGGCAGAGCA----agacagat-------gatagatg----gatagatatagatagatgataaatagg---tagatgatagataat--------aggttataggtacatagatGATGATTGATT i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 13190 260 + 40826 AAGAGGGCAGAGAAGTGGAGAGAATGAGGGAAGGGAGCTGAGAAAAGCCCTAAAATCAGAGTCCTGAGGGAGAGGCACAAGGAGAGAGAAAGATGGAGATGTGGAGGATGAATTGCAGATATTTc-aaagacaacgagacagactgagaggcagagaaagacaaggagatggagacagagaGATG--Cagatgg--atagatagatgataaatacg---tagatgatagataat----agataggttatagatacatacatgatgattgatt i rheMac3.chrUn_JH290802 I 509 I 538 s papAnu2.chr19 47696942 265 + 51301725 aagagggCAGAGCAGT-GAGCATATGATGGAAGGGAGCAGAGAAATGCCCTAAAATCAGAGCCCTGAGGGAGGGGCACAAAAACAGGGAAAGATAAAGATGTGG-GGATGGATTGCagagatgccaaaagagaactagagagactgagaggcagagaa----aaggagaaggagaaagacagacg-atagatagatataaatggatgaaagataagagatagatgatagataacagagagataggtgatagataaatagatgatgagtagac i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47393875 252 + 50890351 AAGAGGGCAGAGAAGTGGAGAGAATGATGGAAGGGAGCAGAGAAAAGCTCCAAAATTAGAGTCCTGAGGGAGAGGCACAAGGACAGAGAAAGCTGGAGATGTGG-GGATGAATTACAGAGATTCC-AAAGAGAACTAGAGAGACCAAGAGGCAGagaa----agacagat-------gatagatggatagatagatatagagagatgataaatagt---taggtgatagataat----agataggttatagatacatagatgatgattgctt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102974108 15338 + 122678785 I e calJac3.chr22 45771733 627 + 49145316 I a score=195499.000000 s hg38.chr19_GL949747v2_alt 407304 364 + 729520 cattcattgattaatcgatgatacatagagatgatgaagatgaaga--tagatagata--------atacat----agagatagagaggcagac--aaagagaaatcatagagagagagagacgatacatagatatagataatagatgatttttg----gatagacaattgatagata----aatagattatatatagat----atagatgacaggtagagaatttgtagataggcaccaaatagataaatagatatatcgatagataatagatagaaatatgcagaaagttatgaacaggacacaaagtgagaaactcagaattt-aaaaaaagtaacatcaagtcaactagtccaaggagAGTCAGAGAG---------AATAAAACAATCCAAAAAGGG s panTro4.chr19 59661191 357 + 63644993 gattc----attaatagatgatacatagagatgatgatgatgaaga--cagatagata--------atacat----agagatagagaggcagac--agagagaaatcat------acagagatgatacatagatatagataatagatgattgatggatagatagacaattgatagata----catagatgatatatagat----atagatgacaggtagagaatttgtagataggcactgaatagataaatatatagatcgatagataatagatagaaatatgcagaaagttatgaacaggacacaaagtgagaaactcagaattt--aaaaaagtaacatcaagtcaaccaatccaaggagAGTCAGAGAG---------AATAAAACAATCCAAAGAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56652031 365 + 60714840 GACTCATTGATCAATAGATGATACATAGAGATGATGAGGATGAaga--tagatagata--------atacat----agagatagagaggcagacaaagagagaaatcat--agagagagagatgatacatagatatagataatagatgattgatggatagatagacaattgatagata----aatagatgatatatagat----aTAGAGGACAGGTAGAGAATTTGtagatagacactgaatagataaatagatagatcggtagata----atagaAATATGCAGAAAGTTATGAAGAGGACACAAAGTGAGAAACTCAGAATTTAAAAAAAAGTAACATCAAGTCAACCAATCCAAGGAGAGTCAGAGAG---------AATAAAACAATCCAAAAAGGG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47697207 360 + 51301725 -------------------gatatagatagatgatatagatagagaagtagatagatagacagatgatacataaatagacatagagagacagaaagacagacacgtgat---gatagatagatgg---atagatacatacatacattgattgatagat-gatagataacagagagagaggt-cata---gatacacagatgatgatagatgatagata---catacatacatagataattgatagatc--------gatcaatagataatagatagaaataTGCAGAAAGTTATGaataagacagaaaatgagagactcagaattaaagaaagaggaagatcAAGTCAACCAATCCAAGTAGGGTCAGAAAggtcagaaataataaaatggtacaaaaaag- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47394127 376 + 50890351 gtttcattgattaatagatgatacatagagatgatgatgatcaaga--tagatagataaatatatgatacatcgagagagagagagaggcagacagagagagaaatcag--agagagagagatggtacattgatacagataacaggtgatggatggatagatagacaattgatagagagataaatagatgatacatagat----atagatgacagata----atttatagatagaccctgaatagatca----atagatcagtagataacatatagaaatataCAGAAAGTTATGAACAGGACACAAAGTGAGAAACTTAGAATT-AATAAAAAGTAACATCAAGTCAACAAATCCAAGGAGAGTCAGAGAG---------AAGAAAACAATACAAAAAGGG i chlSab2.chr6 C 0 I 13426 e canFam3.chr1 102974108 15338 + 122678785 I e calJac3.chr22 45771733 627 + 49145316 I e rheMac3.chrUn_JH290802 13450 538 + 40826 I a score=26327.000000 s hg38.chr19_GL949747v2_alt 407668 39 + 729520 AAAACATATCTagaggtgagaaagtgaggtcagagacct s panTro4.chr19 59661548 39 + 63644993 AAAACATATCTAGAGGTGGGGAAGTGAGATCAGAGACCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56652396 39 + 60714840 AAAACATATCTAGAGGTGGGGAAGTGAGGTCAGAGACCT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47697567 31 + 51301725 aaaacatagatagGGATGGGGAAGTGAGGTC-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47407929 39 + 50890351 AAAACATAGCTAGGGATGGGGAAGTGAGGTCAGAGACCT i chlSab2.chr6 I 13426 C 0 e canFam3.chr1 102974108 15338 + 122678785 I e calJac3.chr22 45771733 627 + 49145316 I e rheMac3.chrUn_JH290802 13450 538 + 40826 I a score=60501.000000 s hg38.chr19_GL949747v2_alt 407707 54 + 729520 agagagacagagaaggtggaaagaggaaatagacataaagagagatggtgtgga s panTro4.chr19 59661587 53 + 63644993 AGAGAGACAGAGAAGGTGGAAGGAGGAAATAGACATGAAGAGAGATGG-GTGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56652435 54 + 60714840 agagagacagagaaggtggaaggaggaaatagacatgaagagagatggggtgga i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 13988 54 + 40826 agagagagagagaaggtgaaaggagaaaatagacatgaagagacatggggtgga i rheMac3.chrUn_JH290802 I 538 C 0 s papAnu2.chr19 47697598 52 + 51301725 --agagacagagaaggtggaaggaggagacagacatgaagagagacggggtgga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47407968 54 + 50890351 AGAGACACGGAGAAAGTGGAAGGAGGAAATAAACATTAAGGGAGATGGGGTGAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102974108 15338 + 122678785 I e calJac3.chr22 45771733 627 + 49145316 I a score=100508.000000 s hg38.chr19_GL949747v2_alt 407761 99 + 729520 gggtgagacagag----agagagagCATTAGGCCA-TAGAGCAGGGG-AGTGAGT---------------TCTCAGCTCAGGTGGGAGGGGAGTTGTGACAAGGAAGAACCTCCCTGAGG s panTro4.chr19 59661640 91 + 63644993 GGGT------GAG----AGAGAGAGCATTAGGTCA-TAGAGCAGGGG-AGTGAGC---------------TCTCAGCTCAGGT--GAAGGGAGCTGTGACAAGGAAGATCCTCCCTAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56652489 99 + 60714840 gggtgagagatag----agagagagCATTAGGCCA-TAGAGCAGGGG-AGTGAGT---------------TCTCAGCTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 14042 95 + 40826 gggt------aag----aaagagagCATTAGGTCACTAGAGCAGGTGCAGGGAGT---------------TCTCAGCTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47697650 91 + 51301725 gggt--------g----agagagagcattaggCCA-TAGAGCAGGGG-AGTGAGT---------------TCTCAGCTCAGATGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47408022 97 + 50890351 GGGT------GAGAGATAGAGAGAGTACTAGGTCA-TAGAGCAGGGG-AGTGAGC---------------TCTCAGCTCAGGTGTGAGGGGAACTGTGACAAGGAAGAACCTCCCTGAGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102735479 87 + 122678785 GGAGGAGACAGAG----AGAGAGAG----AGGGGA-TGGGG-ATGGG-AGAGACTCAGAGGACACAGACATCTCAGGTCAG----------------GACAAGGCTAGATCACC------ i canFam3.chr1 n 15338 C 0 e calJac3.chr22 45771733 627 + 49145316 I a score=397190.000000 s hg38.chr19_GL949747v2_alt 407860 264 + 729520 ---AAACTGCCTCTTCTCCTTCCAGG--------TCTATGTGGGAAACCTTCTCTCTCAGCCCAGCCGCGCCCCATGGTTAAGGCAGGAGAGAGCGTGACCTTGTCCTGCAGCTCCCGGAGCTCCTATGACATCTACCATCTATCAAGGGACGGGGAGGCTCATGAACTTAGGCTCCCTGCA----GTGCCCAAGGTCAA---TGGAACCTTCCAGGCCAACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGAC s panTro4.chr19 59661731 264 + 63644993 ---AAACTGCCTCTTCTCCTTCCAGG--------TCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGATTCTGGCAGGAGAGAATGTGACCTTGTCCTGCAGCTCCCGGAGATCCTATGACATGTACCGTCTATCCAGGGAGGGGGAGTCTCATGAACGTAGGCTCCCTGCA----GGGCCCAAGGTCAA---CGGAACATTCCAGGCCGACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACCGATGCTTCGGCTATTTCCGTGAC i panTro4.chr19 C 0 I 78854 s ponAbe2.chr19 56652588 264 + 60714840 ---AAACTGCCTCTTCTCCTTCCAGG--------TCTATATGAGAAACCTTCTCTCTCAGCCCAGCCAGGCCCCAGGGTTCTGGCAGGAGAGAGCGTGACCTTGTCCTGCAGCTCCAGGAGCTCCTTTGACATCTACCATCTACCCAGGGAGGGGAAGGCTCATGAACTTAGGCTCCCTGCA----GTGCCCAAGGTCAA---CGGAACATTCCAGGCTGACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACAGATGCTTCGGCTGTTTCCGTGAC i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 14137 264 + 40826 ---AAACTGCCTCTTCTCCTTACGGG--------TCTATACAGGAAATGTTCTCTCTCAGCCCAGCCGGGCCCCACTGTTCATGCAGAAGAGAACATGACCTGATCCTGCAGCTCCCGGCACTCCTTTGACATGTACCATCTATCCAGGGAAGGGGAGGCCCATGAACTGAGGCTCCCTGCA----GTGCCGAGGGTCCA---TGGAACATTCCAGGCCGACTTCCCTCTGGGGCCTGCCA------CCCACGGAGGGACGTTCAGATGCTTTGGCTCTTTCCGTGAC i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47697741 264 + 51301725 ---AAACTGCCTCTTCTCCTTCCAGG--------TCTATATGCGAAACCTTGTCTCTCAGCCCAGCCAGGCCCCATGGTGCAGGCAGGAGAGAACGTGACCTTGTCCTGCAGCTCCCAGAGCTCGTTTGACATTTACCATCTATCCAGGGATGGGGAGGCCCATGGACTTAGGCTCCCTGCA----GTGCCGAGGGTCAG---TGGAACATTCAAGGCTGACTTTCCTCTGGGCCCTGCAA------CCCACGGAGGGAACTACAGATGCTTCGGCTCTTTCCGTGCC i papAnu2.chr19 C 0 I 31313 s chlSab2.chr6 47408119 264 + 50890351 ---AAACTGTCTCTTCTCCTTCCAGG--------TCTATACAGGAAACCTTCTCTCTCAGTCCAGCCGGGCCCCACTGTTCACGCAGGAGAGAACTTGACCTTGTCCTGCAGCTCCCAGAGCTCCTTTGACATGTACCATCTATCCAGGGAAGGGGAGGCCCATGAACTGAGGCTCCCTGCA----GTGCCGAGGGTCCA---TGGAACATTCCAGACCGACTTCCCTCTGGGGCCTGCCA------TCCACGGAGGGACGTACAGATGCTTCGGCTCTTTCCGTGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772360 270 + 49145316 ---AATCAGCCTCTTTTCCTCCCAGG--------AAAACACAAAAAGCCTTCTCTCTCCACCCAGGAGGACCCCAGGATGGGGAGTGGAGAGAACGTGACGTTATTCTGCATCTCTGAAATCTCATTTGACCGGTACCATCTGTGGAGAGAGGGGGCTCCTTATGGCCAGTGGCTCAGTGGA----GGTCAGGGACACAG---GGGAGCATTCCAGGCCAACTTTTCTGTGGGCCTCGCAACGCCAGCCCATGGAGGGACCTATAGATGCTACGGTTCTTTCAATGCC i calJac3.chr22 I 627 C 0 s canFam3.chr1 102735566 275 + 122678785 ACTCACTCATCCTTCCTCTCTCTAGGACAGTTCCCCTATAC-----ACCCTCCCTCTGGGTGCAGCCAGGACCTATGGTGGCCCCAGGAGAGAATGTGACCCTGCTATGTCAGTCACAGAGCTCTGTGCACACTTTCCTTCTGTCCAAGGAGGGGGCAGCTGATCA-------CCCCCTGCATATTAGATCAAAGTACAAAGCTGGGCAGCACCAGGCTGAATTCTCCATGAGTCCTGTGACTTCAGCCCATGG-GGGGCCTACAGGTGTTACAGCTCATCTAGTGCC i canFam3.chr1 C 0 C 0 a score=87442.000000 s hg38.chr19_GL949747v2_alt 408124 64 + 729520 TCTCCCTACGAGTGGTCAGACCTTAGTGACCCACTGCTTGTTTCT-GTCACAGGTGAGGAAACCA s panTro4.chr19 59740849 64 + 63644993 TCTCCCTACAAGTGGTCAGACCTTAGTGACCCACTGCTTGTTTCT-GTCACAGGTGAGGAAACCA i panTro4.chr19 I 78854 C 0 s ponAbe2.chr19 56652852 64 + 60714840 TCTCCCTATGAGTGGTCAGACCCGAATGACCCACTGCTTGTTTCT-GTCACAGGTGAGGAAACCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 14401 64 + 40826 TCTCCCTATGAGTGGTCAGACCCGAGTGACCCACTGCCCATTTCT-GTCACAGGTGAGGAAACCA i rheMac3.chrUn_JH290802 C 0 C 0 s chlSab2.chr6 47408383 64 + 50890351 TCTCCCTACGAGTGGTCAGACCTGAGTGACCCACTGCCCATTTCT-GTCACAAGTGAGGAAACCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772630 64 + 49145316 TCCCCCTATGAGTGGTCGGCCCCCAGTGAGCCCCTGCACCTTTCT-GTCACAGGTGAGGAGCCCA i calJac3.chr22 C 0 I 91198 s canFam3.chr1 102735841 65 + 122678785 TCCCTCTACAACTTGTCACACCCCAGTGACCCCCCTGGAGCTCCTGGTCTCAGGTGAGGAGCCCT i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47698005 31313 + 51301725 I a score=6774.000000 s hg38.chr19_GL949747v2_alt 408188 8 + 729520 GTCTGTTC s panTro4.chr19 59740913 8 + 63644993 GTCTGTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56652916 8 + 60714840 ATCTGTTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 14465 8 + 40826 ATCTCTTC i rheMac3.chrUn_JH290802 C 0 C 0 s chlSab2.chr6 47408447 8 + 50890351 ATCTCTTC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102735906 8 + 122678785 GACTGTCC i canFam3.chr1 C 0 n 0 e calJac3.chr22 45772694 91198 + 49145316 I e papAnu2.chr19 47698005 31313 + 51301725 I a score=897828.000000 s hg38.chr19_GL949747v2_alt 408196 1065 + 729520 CCCAAATAGTGGGACTCAGACGGACTACAATGGCCACATTCAGGGGAGCCTCAGATGGAGGGGGTGGCCATGGGGGTGTCAGCCAGAGATGCTGgacagaagagacacaaagcaaacatacagaaagaggcatagacagacagacagagcgaggcagacagaTCACATTAGGGTTTGGGGTGGTAACTGCAACCCTACCTGA---AGCTTGCAGATAGAGCACAGGCCACATAAACCACTTCCCAGTCTTTGTACAGAAGCCCACCTGGGACACATGTAAACAGCATCAATGCTGACTCAGGAGCATGAAAGGCCGGGCTCAGATTGGAAAGACTAGAGGTAGCATTGGCCGCCCGCCATTGCCCATTTCCAGAAGCCCCCACCTCTCACCAAAGAGTGATTTCCACATGGGGGGCACAGATGCAACCATCGTTGGGGGAGCCCCAATGTCTCTTGATGGGAGGCATTTTCCACCCTAGATGTTTTTTGCTCTCTCCACACCTTGGAGACTCAGTGGGGGAGTCTTCTCTGGGGACTCGGGGAGGGCCTCCCTGGGACTCGCAGGATTTCCAAGCTAGATGACAACATGACAGGTGGAAACAGGCCCATTCCTTCGCCAGGGGCCCCAAGCTCCATCCCAGGAGATGAGAAGAGGCTCTTCTCATTGGTCAGTGGATCCCTGAGGGGACAGAGGCTCAGCACTGAAGGCTGAGAAGGATCTGCCACTT---CGCTCAGTGGCCTCAAGCCAGACATCTTCCCTACAGACTTGCAGTGATTCTCCATCAGCATTTAGGGCTGTGGCCACCAACCTGGGTGTTGGTCTGTAGGAACTTTTCATTTCTGACCTTCCATAACTGAGTTCTCTTCCTAAATGTGGAATGCCTTGTACTCCATGTTACTCTCTCCCCAGAAAGAATGTGTGGCTTGTCTGCTCTCCAGCCCTGTCATGGAGATTGATAATCCTTAGGGAGCAAGAGGAGAGGGAAAGAACAAAGTATGAGACCACCTAGGTGCTACTGGTTGAGGTTCCATTTGCCAGTGAAGGGACTTCACTCAGCCGAGGGGGCA s panTro4.chr19 59740921 1068 + 63644993 CCCAAATAGTGGGACTCAGACGGACTACAATGGCCACATTCAGGGGAGCCTCAGATGGAGGAGGTGGCCATGGGGGTGTCAGCCAGAGATGCTGGATAGAAGagacataaagcaaacatacagaaagaggcatagacagacagacagagcgaggcagacagaTCACATTAGGGTTTGGGGTGGTAACTGCAACCCTACCTGA---AGCTTGCAGATAGAGCGCAGGCCACATAAACCACTTCCCAGTCTTTGTACAGAAGCCCACCTGGGACACATGTAAACAGCATCAATGCTGACTCAGGAGCATGAAAGGCCAGGCTCAGATTGGAAAGACTAGAGGTAGAATTGGCCGCCCACCATTGCCCATTTCCAGAAGCCCCCACCTCTCACCAAAGAGTGATTTCCACATGGGGGGCACAGATGCAACCATCGTTGGGGGAGCCCCAATGTCTCTTGATGGGAGGCATTTTCCACCCTGGACATCTCTTGCTCTCTCCACACCTTGGAGACTCAGTGGGGGAGTCTTCTCTGGGGACTCGGGGAGGGCCTCCCCGGGACTCGCAGGATTTCCAAGCTAGATGATAACATGACAGGTGGAAACAGGCCCATTCCTTCACCAGGGGCCCCAAGCTCCATCCCAGGAGATGAGAAGAGGCTCTTCTCATTGGTCAGTGGATCCCTGAGGGGACAGAGGCTCGGCACTGAAGGCTGAGAAGGATCTGCCACTTCTCCGCTCAGTGGCCTCAAGCCAGACATCTTCCCTACAGACTTGCAGTGATTCTCCATCAGCATTTAGGGCTGTGGCCACCAACCTGGGTGTTGGTCTGTAGGAACTTTTCATTTCTGACCTTCCATAACTGAGTTCTCTTCCTAAATGTGGAATGCCTTGTCCTCCATGTTACTCTCTCCCCAGAAAGAATGTGTGGCTTGTCTGCTCTCCAGCCCTGTCATGGAGATTGATAATCCTTAGGGAGCAAGAGGAGAGGGAAAGAACAAAGTATGGGACCACCTAGGTGCTACTGGTTGAGGTTCCATTTGCCAGTGAAGGGACTTCACTCAGCCGAGGGGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56652924 1068 + 60714840 CCCAAATAGTGGGACTCAGACGGACTACAATGGCCACATTCAGGGGAGCCTCAGATGGAGGGGGTGGCCATGGGGGTGTCAGCCAGAGATGCTGGATAGAAGagacataaagcaaacatacagaaagagatatagacagacagacagagcgaggcagacagaTCACATCAGGATTTGGGGTGGTAACCGCAACCCTACCTGA---AGCTTGCAGATAGAGCACAGGCCACATAAACCACTTCCCAGTCTTCGTACAGAGGCCCACCTGGGATGCATCTAAACAGCATCAGTGCTGACTCAGGAGCATGAAAGGCCAGGCTCAGATTGGAAAGACTAGAGGTAGCATTGGCCGCCCACCATTGCCCATTTCCAGAAGCCCCCACCTCTCACCAAACAGTGATTTCCACGTGGGGGGCACAGATGCGACCATCGTTAGGGGAGCCCCAATGTCTCTTGATGGGATGCATTTTCCACCCTGGATGTCTCTTGCTCTCTCCACACCTTGGAGACTCAGTGGGGGAGTCTTCTCTGGGGACTCGGGGAGGGCCTCCCCGGGATTTGCAGGATTTCCAAGCTAGATGACAACGTGACAGGTGGAAACAGGCCCATTCCTTCACCAGGGGCCCCAAGCTCCATCCCAGGAGATGAGAAGAGGCTCTTCTCATTGATCAGTGGATCCCTGAGGGGACAGAGGCTCAGCACTGAAGGCTGAGAAGGATCTGCCACTTCTCCGCTCAGTGGCCTCAAGCCAGACATCTTCCCTAAAGATTTCTGGTGATTCTCCATCAGCATTTAGAGCTGTGGCCACCAACCTGGGTGTTGGTCTGTAGGAACCTTTCATTTCTGACCTTCCATAACTGAGTTCTCTTCCTAAATGTGGAATGCCTTGTACTTCATGTTATTCTCTCCCCAGAAAGAATGTGTGGCTTGTCTGCTCTCCAGCCCTGTCATGGAGATTGATAATCCTTAGGGAGCAAGAGGAGAGGGAAAGAACAAAGTATGAGACCACCTAAGTGCTACTAGTTGAGGTTCCATTTGCCAGTGAAGGGACTTCACTCAGCCGAGGGGGCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 14473 1056 + 40826 CCCAAATAGTGGGACTCAGACAGACGACAATGGCCACATTCAGGGTGACCTCAGA---------TGGCCATGGTGGTGCCAGCCAGAGATACTGgacagaaaagacacagagcaaacatacagaaagag--atagacagacagacagagcaaggcagacagaTCACATCAGGATTTGGGGCGGTAACTGCAACCCTACATGA---AGCTTGCAGATAGAGCACAGGCCACAAAAAACACTTCCCGGTCTTTGTACAGAGGCCTACATGGGACACATCTAAGCAGCATCAGTGCTGACTCGGCAGCGTGAAAGGCCAGGCTCAGATTGGAAAGACTAGAGGTAGCATTGGCCGCCCACCATTCCCCATTTCCAGAAGCCCCCACATCTCACCAAAGAGTGATTTCCACGTGGGAGGCACAGATGCAACCATTGTTGGGGGAGCCTCCATGTCTCTTGATGGGAGGCATTTTCCACCCTGGATGTCTCCTGCTCCCTCCACACCTTGGAGCCTCAGTGGGGGAGCCTTCTCTGAGGACTCGGGGAGGGCCT-CCTGGGATTCCCAGGATTTCCAAGCTAGATGACAACATGGCAGGTGGAAAGAGGCCCATTCCTCCATCCAGGGAGCCAAGCTCCATCCCAGGAGATGAGAAGAGGCTCTTCTCTTTGGTCAGTGGATCCCTGAGGGGACAGAGGCTCAGCACTGAAGGCTGAGAAGGATGTGCCACTTCTCCACTCAGTGGCCTCAAGCCAGACATCTTCCCTGCAGACTTCCAGTGATTCTCCATCAGCATTGAGGGCTGTGGCCACCAACCTGGGTGTTAGTCTATAGGAACTTTTCATTTCTGACCTTCCATAACTGAGTTCTCTTCCTAAATGTGGAATGCCTTGTACTCCATATTACTCTCTCCCCAGAACGAATGTGTGGCTTGTCTGCTCTCCAGCCCTGTCATGGAGATTGATCATCTTTAGGGAGCAAGAGGAGAAGGAAAGAACAAAGTATGGAACCATCTAGGTGCTGCTGGCTGAGGTTCCATTTGCCAGTGAAGGGACTGCACTCAGCCGAGGCGGCA i rheMac3.chrUn_JH290802 C 0 C 0 s chlSab2.chr6 47408455 1042 + 50890351 CCCAAACAGTGGGACTCAGACGGACGACAATGGCCACATTCAGGGGAGCCTCAGA---------TGGCCATGGGGGTGTcagccagagatactggatagaaaagacacagagcaaacatacagaaag------agacagacagacagagcgaggcagacagaTCACATCAGGACTTGGGGTGGTAACTGCAACCCTACATGAATCAGCTTGCAGACAGAGCACAGGCCACAAAAAACACTTCCCAGTCTTTGTACAGAGGCCTACATGGGACACATCTAAGCAGCATCAGTGCTGACTCAGCAGCATGAAAGGCCAGGCTCAGATTGGAAAGACAAGAGGTGGCATTGGCCGCCCACCATTCCCCATTTCCAGAAGCCCCCACATCTCACCAAAGAGTGATTTCCACGTGGGGGGCACAGATGTGACCATCGTTGGGGGAACCTCCATGTCTCTTGATGGGAGGCATTTTCCACCCTGGATGTCTCCTGCTCCCTCCACACCTTGGAGCCTCAGTGGGGGAGTCTTCTCTGAGGACTCGGGGAGGGCCT-CCTGGGACTCCCAGGATTTCCAAGCTAGATGACAACATGGCAGGTGGAAAGAGGTCCATTCCTCCATCCGGGGAGCCAAGCTCCATCCCAGGAGATGAGAAGAGGCTCTTCTCTTTGGTCAGTGGATCCCTGAGGGGACAGAGGCTCAGCACTGAAGACTGAGAAAGATGTGTCACTTCTCCACTCAGTGGCCTCAAGCCAGACATCTTCCCTGCAGACTTCCAGTGATTCTCCATCAGCTTTTAGGGCTGTGGCCACCAACCTGGGTGTTGGTCTGTAGGAACTTTTCATTTCTGACC-------------TTCTCTTCCTAAATGTGGAATGCCTTGTACTCCATATTATTCTCTCCCCAGAACGAATGTGTGGCTTGTCTGCTCTCCAGCCCTGTCATGGAGATTGATAATCTTTAGGGAGCAAGAGGAGAAGGAAAGAACAAAGTATGGAACGATCTAGGTGCTGCTGGCTGAGGTTCCATTTGCCAGTGAAGGGACTGCACTCAGCCAAGGCGGCA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102735914 0 + 122678785 I e calJac3.chr22 45772694 91198 + 49145316 I e papAnu2.chr19 47698005 31313 + 51301725 I a score=324602.000000 s hg38.chr19_GL949747v2_alt 409261 263 + 729520 ACTCAGGGAAGTCAGCCGAGGGAGGGCATTAGAGTAGAGAGAACTGAGCTCACCCAGTAAATGACCCCTTCACTAactcattcatctaatatttatttcacacctaccatcagttctctctgtttcatggccaggagtagacagcacggccaagctcctgggttcatgatgctcacattgctgtggggtgggagagagaggcagaac----atgaatgaatgaatgagagaatgaatgaatgagtgaatgatggaatgagtg--------------------aatga s panTro4.chr19 59741989 263 + 63644993 ACTCAGGGAAGTCAGCCGAGGGAGGGCATTAGAATAGAGAGAACTGAGCTCACCCAGTAAATGACTCCTTCACTAactcattcatctaatatttatttcacacctaccatcagttctctctgtttcatggccaggagtaaacagcacggccaagctccttggttcatgatgctcacattgctgtggggtgggagagagaggcagaacatgaatgaatgaatgaatgagagaatgaatgaatgagtgaatgatggaatgag------------------------tga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56653992 263 + 60714840 ACTCAGGGAAGTCAGCCGAGGGAGGGAATTAGAGTAGAGACAACTGAGCTCACCCAGTAAATGACCCCTTCACTACCtcattcatctaatatttacttcacacctaccatcaattctctctgtttcatggccaggagtaaacagcacagccgagctccttggttcatgatgctcacattgctgtggggtgggagagagaGGCAGAAC----atgaatgaatgaatgagagaatggatgaatgagtgaatggatgaatgagtg--------------------aatga i ponAbe2.chr19 C 0 I 318 s rheMac3.chrUn_JH290802 15529 263 + 40826 ACTCAGGGAAGTCAGCCGAGGGAGGGCATTAGATTAGAGAGAACTGAGCTCACCCAGTAAATGACCTCTTCattaactcattcatctaatatttatttcacagctaccatcagttatctctgttgcatggccaggagtaaacagtgtggccaagttccttggttcatgatgctcacattgctgtggggtgggaaagaGAGGCAGAAC----atgaatgaatgaatgagtgaatgaatgaatgagtgaatggatgaatgagta--------------------aatga i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47729318 283 + 51301725 aCTCAGGGAAGTCAGCCGAAGGAGGGCATTAGATTAGAGAGAACTGAGCTCACCCAGTAAATGACCTCTTCATTAACTCATTCATCTAATATTTATTTCACACCTACCATCAGTTATCTCTGTTGCATGGCCAGGAGTAAACAGTATGGCCAAGCTTCTTGGTTCATGATGCTCACATCGCTGTGGGGTGGGAGAAAGAGGCagaac----atgaatgaatgaatgagcaaatgaatgaatgagtgaatggaggaatgagtaaatgaatgaatgagtgagtgaatga i papAnu2.chr19 I 31313 C 0 s chlSab2.chr6 47409497 263 + 50890351 ACTCAGGGAAGTCAGCCGAGGGAGGGCATTAGATTAGACAGAACTGAGCTCACCCAGTAAATGACCTCTTCattaactcattcatctaatatttatttcacacctaccatcagttatctctgttgcatggccaggagtaaacagtgtggccaagttgcttggttcatgatgctcacattgctgtggggtgggagagagaggcagaac----atgaatgaatgaatgagcaaatgaatgaatgagtgaatggatgaatgagta--------------------aataa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102735914 0 + 122678785 I e calJac3.chr22 45772694 91198 + 49145316 I a score=10485.000000 s hg38.chr19_GL949747v2_alt 409524 12 + 729520 atgaatgaatga s panTro4.chr19 59742252 12 + 63644993 atgaatgaatga i panTro4.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 15792 12 + 40826 atgaatgagtga i rheMac3.chrUn_JH290802 C 0 I 165 s papAnu2.chr19 47729601 12 + 51301725 atgaatgagtga i papAnu2.chr19 C 0 I 16 s chlSab2.chr6 47409760 12 + 50890351 atgaatgagtga i chlSab2.chr6 C 0 I 165 e canFam3.chr1 102735914 0 + 122678785 I e ponAbe2.chr19 56654255 318 + 60714840 I e calJac3.chr22 45772694 91198 + 49145316 I a score=2810.000000 s hg38.chr19_GL949747v2_alt 409536 13 + 729520 atgtatgaattag s panTro4.chr19 59742264 13 + 63644993 atgtatgaattag i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47729629 13 + 51301725 ctggatgaattag i papAnu2.chr19 I 16 I 85 e canFam3.chr1 102735914 0 + 122678785 I e ponAbe2.chr19 56654255 318 + 60714840 I e calJac3.chr22 45772694 91198 + 49145316 I e chlSab2.chr6 47409772 165 + 50890351 I e rheMac3.chrUn_JH290802 15804 165 + 40826 I a score=115832.000000 s hg38.chr19_GL949747v2_alt 409549 132 + 729520 tgagtgaatccttagcacttggtgaaagtgccatgcacagaatgaaatgaatgaacgtggaacgttgtcatttggagtgtacaggagggaacgtctcactgagacctcatcagagagatcacatttaaactc s panTro4.chr19 59742277 132 + 63644993 tgagtgaatccttagcacttggtgaaagtgccgtgcacagaatgaaatgaatgaacgtggaacgttgtcatttggagtgtacaggagggaacgtctcactgagacctcatcagagagatcacatttaaactc i panTro4.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 15969 132 + 40826 tgagtgaatCCTCAGCACCTGGTGAAAGTGCCGTGCACAGAATGAAATGAAGGAACATGGAACGTTGTCATTTGGAGTGTACAGGAGGGAACATCTCACTGagaactcaccaaggagatcacatttaaactc i rheMac3.chrUn_JH290802 I 165 C 0 s papAnu2.chr19 47729727 132 + 51301725 tgagtgaatcctCAGCACTTGGTGAAAGTGCCGTGCACAGAATGAAATGAAGGAACATGGAACGTTGTCATTTGGAGTGTACAGGAGGGAACATCTCACTGAGAACTCACCAAGGAGATCACATTTAAACTC i papAnu2.chr19 I 85 C 0 s chlSab2.chr6 47409937 132 + 50890351 tgagtgaatCCTCAGCACTTGGTGAAAATGCCGTGCACAGAATGAAATGAAGGAACATGGAACGTCATCATTTGGAGTGTACAGGAGGGAACATCtcactgagaactcaccagggagatcacatttaaactc i chlSab2.chr6 I 165 C 0 e canFam3.chr1 102735914 0 + 122678785 I e ponAbe2.chr19 56654255 318 + 60714840 I e calJac3.chr22 45772694 91198 + 49145316 I a score=2660456.000000 s hg38.chr19_GL949747v2_alt 409681 2148 + 729520 cgatcttagagacaagagggagtgagccctggggagtgtgttgaaaggaactttcatggacttaggacattggggatgaccctaatgtgagaatgagcttggtgtgttccaagaaGTCCATGGACCTGCCATATGGTGAGGGCTGGTCAGAATCCAGAGAGATTTCtaaatgcccttgtgcttgtaaggaaagtgagtcctgtggttgggagtggacttataccttgggtcaggtccagcaattatctttctaaatcctctctaattgcctgaaccacttctatcaacaactgagaaaagaggagtgttaaacaccccactgtggccgtggatttgcctacctgtccatttatttccgcgactcttcctccatgtatatttgcaggaatattactgggagtggttaagtgtaaactgattatatattcctggtaaatttaaaatgctataaatttacctgcttttttcctacattttatgcttaatgttttccgctgatttttcccaaagactaattttgtctaattttaatatagttataccacatttctaac----agtgattgcttggtatatttctacattgtttaatttcaaactccatgaattgttaacattgagatgtgtcctttgtaaaTTTCAAACAATTCGCCTTAGAAAGTAAGACTTTCTGACAATCTTTTGTTCATGTTTGAGCAGTTCTTCCAATCATATTTTTGTTATTATTACGTTGTGTTTTCCTGATTCCCTTTTTTTCCCACTGA---CTTCTGTGGTTTTCTATTTCAAACATTCTATTTTTGATCTATGTCGTTTAGGAATACATATATGGTGTACTCATCCTGAAGTTGTTACATATTTTTAAAATTGAAATTAATCATTTCAGAGATTAAACTGCAAATATAAAAACATATTTCCACTCTTCCTGTGTAAGAACAGGATTTTAGAGCATATTTAGTACATATGTTTGTATTTACTTATATGATGTTTTGTTTTGTGGTATACATAATTCTATCTTTTTCAGAAATTACACAGGGGCATGTTTTCATACACTATCGtatggtccatattcatttttggcatagccatatttttagttcttcctctgctcttagttattgtcagaatcttcgacaccccatctggtttcactttctttatctttgaggcacggtcatcagaatttcctttagggtcagtgagaaaagctttctttgcccttttgtctttcagttctgtttctttcctgcgttgatcttggacagtaactgtactatgtaaggaattgtcggtggctggcgacggtatcttagctgggta-aagatgctattctactggcttatgttttcc-ttttttctgtggggaagacaatgcttggctccctataaatccttaccagctgatccttttcctctggctaattttaagggttggttgtgcttttatgctgcttttctgtaatgttgaacgtgaggtgtgtttacttcattctgcctggcattcactggatttcttgaacctgtggattgatggatgtgtctacttcctccaaataatcaacaattgcctctttaaagattgcttctgacctgttttctcgttctttctttttggaactcaagttaggagcattctaaaactgttgtcaatttttaccctgtcacaaaactgctctttcttgtttcagttatttgctttttctgtgcattaatattgatggtttcctctgtcatagaggataaatactctcttcactgttgtgtACACAACATTTTAACTAGTTATTCTGGTTTAAATTTAATATTGACTTTATCTACATATCACAATTGATTACTGTGTACAGACTTTCttttctattagtataaatttatgaggtacacttgtaattttgtgacatgagtatgttgcagagtagtgaagtcaggacttttactatatccatcacccaaataccgtacattgtactcattaagcaaattctcatcactcacccacgtcccgccaccctccagccttct-agcctccgctgtccgtcattccacactctacgtccatatgtacacattactcccctcccatgtagagtgagaagatgtggtatttgtctttctgagtggttttatgtaaaataatggcgtccagctccatctatgtt s panTro4.chr19 59742409 2152 + 63644993 tgatcttagagacaagagggagtgagccctggggagtgtgttgaaaggaactttcatggacttaggacattggggatgaccctaatgtgagaatgagcttggtgtgttccaagaaGTCCATGGACCTGCCATATGGTGAGGGCTGGTCAGAATCCAGACAGATTTCtaaatgcccttgtgcttgtaaggaaagtgagtcctgtggttgggagtggacttataccttgggtcaggtccagcaattatctttctaaatcctctctaattgcctgaaccacttctatcaacaactgagaaaagaggagtgttaaacaccccactgtggccgtggatttgcctacctgtccatttatttccgtgactcttcctccatgtatatttgcaggaatgttactgggagtggttaagtgtaaactgattatatattcctggtaaattaaaaatgctataaatttacctgcttttttcctacattttatgcttaatgttttccgctgatttttcccaaagactaattttgtctaattttaatatagttatgccacatttctaacagttagtgattgcttggtatattcctacattgtttaatttcaaactctgtgaattgttaagattgagatgtgtcctttgtaaaTTTCAAAAAATTCGCCTTAGAAAGTAAGACTTTCTGACAATCTTTTGTTCATGTTTGAGCAGTTCTTCCAGTCATATTTTTGTTATTATTACGTTGTGTTTTCCTGATTCCCTTTTTTTCCCACTGA---CTTCTGTGGTTTTCTATTTCAAACATTCTATTTTTGATCTATGTCGTTTAGGAATATATATATGGTGTACTCATCCTGAAGTTGTTACATATTTTTTAAATTGAAATTAATCATTTGAGAGATTAAACTGCAAATATAAAAACATATTTCCACTCTTCCTGTGTAAGAACAGGATTTTAGAGCATATTTAGTACGTATGTTTGTATTTACTTATATGATGTTTTGTTTTGTGGTATACATAATTCTATCTTTTTCAGAAATTACACAGGGGCATGTTTTCATACACTAttgtatggtccatattcatttttggcatagccatatttttagttcttcctctgctcttagttattgtcagaatcttcgacaccccatctggtttcactttctttatctttgaggcacggtcatcagaatttcctttagggtcagtgagaaaagctttctttgcccttttgtctttcagtgctgtttctttcctgcgttgatcttggacagtaactgtactatgtaaggaattgtcggtggctggcgacggtatcttagctgggta-aagatgctattcaactggcttatgttttcc-ttttttctgtggggaagacaatgcttggctccctataaatccttaccagctgatcctttccctctggctaattttaagggttggttgtgcttttatgctgcttttctgtaatgttgaacgtgaggtgtgtttacttcattctgcctggcattcactggatttcttgaacctgtggattgatggatgtgtctacttcctccaaataatcaacaattgcctctttaaagattgcttctgacctgttttctcgttctttctttttggaactcaagttgggagcattctaaaactgttgtcaatttttaccctgtcacaaaactgctctttcttgtttcagttattttctttttctgtgcattaatattgacggtttcctctgtcatagaggataaatactctcttcactgttgtgtACACAACATTTTAACTAGTTATTCTGGTTTAAATTTAATATTGACTTTATCTACATATCACAATTGATTACTGTGTACAGACTTTCttttctattagtataaatttatgaggtacacttgtaattttgtgacatgagtatgttgcagagtggtgaagtcaggacttttactatatccatcacccaaataccgtacattgtactcattaagcaaattctcatcactcacccacgtcccgccaccctccagccttct-agcctccgctgtccgtcattccacactctacgtccatgtgtacacaatattcacctcccatgtagagtgagaagatgtggtatttgtctttctgagttgttttatgtaaaataatggcgtccagctccatctatgtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56654573 2152 + 60714840 CGATCTTAGAGACAAGAGGGAGTGAGCCCTGGGGAGTGTGTTGAAAGGAACTTTCACGGACTTAGGACATTGGGGATGACCCTAATGTGAGAATGAGCTTGGTGTGTTCCAAGAAGTCCATGgacctgctgtatggtgagggctggtcagaatccagtcagatttctaaatgtcttagtgcttataaggaatgtgagtcctgtggttgggagtggacttataccttgggtcaggtccaacaattatctttctaaatcctctccaattgcctgaaccacttctatcaacaactgagaaaagaggagtgttaaacaccccactgtggctgtggatttgcctacctgtccgtttatttccgcgacccttcctctatgtatatttgcaggaatgttgctgggagtggttaagtgtaaactgattatatattcctggtaaatcaaaaatactataaatatacctccttttttcctacattttatgcttaatgttttccactgatttttcccaaagactaattttgtctaattttaatatagttataccacatttctaacagttagtgattggttggtatatttccacattgtttaatttcaaactctgtgaattattaacattgagatatgtccttcataaaTTTCAAACAATTCGCCTTAGAAAATAAGACTTTCTGACAATCTTTGGTTTATGTTAGGGCAGTGTTTCCAATCAtatttttgtaattattacgttgtgtttccctgattccctttttttcccacagatttcttttgtggttttatatttcaagcattctattttttatctacatcatttaggaatacatatatggtgtgcctatcctgaagttgttacatattcttaaaattgaaattaatcatttcagagattaaactgcaaatataaaaacatatttccactcttcctgtgtaagaacaggattttagagcatatttagtacatatgtttgtatttacttatatgatgttttgttttgtggtatatataattccatctttttcagaaattacacaggggcatgttttcatacactattgtacggtccatattcatttttggcatagccatatttttagttcttcctctgctcttagttattgtcacaatcttcgacaccccatctggtttcactttctttatctttgaggcacggtcatcagaatttcctttagggtcagtgagaaaagctttctttgcccttttgtctttcagttctgtttctttcctgcgttgatctcggacagtaactgtactatgtaaggaattgtcggtggcaggtgacggtatcttagctgggtg-aagatgctattctactggcttatgttttcc-ttttttctgtggggaagacaatgcttggctccctataaatccttaccagctgatccttttcctctggctaattttaagggttggttatgcttttatgcagcttttctgtaatgttgaacgtgaggtgtgtttacttcattctgcctggcattcactggatttcttgaacctgtggattgatgtatgtgtatacttcctccaaataatcaacaattgcctctttaaagattgcttctaacctgttttctcgttctttctttttggaactcaagttaggagcattctaaaactgttgtcaatttttaccctgtcacaaaactgctctttcttgtttcagttattttctttttctgtgcattaatattgacagtttcctctgacgtaGATG----ATATTCTCTTCACTGTTGTGTACACAACATTTTAACTAGTTATTCTGGTTTAAATTGAATATTGACTTTATCTACATATCATGATTGATTACTGTGTACAGACTTTCttttctatttgtataaatttatgaggtacacgtgtaattttgtgacatgggtatattgcacagtggtgaagtcaggacctttactatatccatcacccaaatactgtacattgtactcattaagcaaattctcattactcacccacgtcctgccaccctccagccttccaagcctctgctgtccgtcattccacactctacgtccatgtgtacacattactcccctcccacgtagagtgagaagatgtggtatttgtctttctgagttgttttatgtaaaataatggcatccagctccatctatgtt i ponAbe2.chr19 I 318 C 0 s rheMac3.chrUn_JH290802 16101 2138 + 40826 cgatcttagagacaagagggagtgagccctggggagcgtgttgaaaggaagtttcatgtacttaggacgctggggatgaccctaatgtgagaatgagcttggtgtgttccaagaaGTCCATGGACCTGCCGTATGGTGAGGGCTGCTCAGAATCCAGTGAGATTTCTAAGTGCCCTTGGGcttgtaaggagtgtgagtcctgtggttgcaagtgaacttgtaccttaggtcaagtccagcaattctcttcctaaatcctctctaactgcctgaaacacttctatcaacaactgag---agaagagtgttaaacaccccactgtggccgtggatgtgcctatctctccgtttacttcggcgacacttcctccatgtatatttgcaggaatattactgggagtgattaagtgtaaattgattatatattcctggtaaattaaaaatactataaatttacctgcttttttcctaaattttatgcttaatgttttccactgatttttccccaagacttattttgtctaattttattataactacaccacatttccaacagttagtgattgcttggtatatttctacattgtttaatttcaaaccctgtgaattgttaacactgacatgtgtcctttgtaaaTTT--AACAACGCACCTTAGAAAACAAGATTTGCTGACAATCTTTTGTTCGTGTTTGAGCAGTTCTTCCAATCATATTTGTGTTATTATTACGTTGTGTTTTCCTGATTCCC--TTTTTCCCACGGACTTCTTTGGTGGTTTTCTATTTCAAACATTCTATTTTTGATCTATGTCGTTTAGGAATACATGTATGGTGTACTCATCCTGAAGTTGTTACATATTTTTAAAACTGAAATTCATCATTTCAGAGATTAAACAGCAAATATAAAAACATATTTCCACTCTTCCTGTGTAAGAACAGGATTTTAGAGTATCTTTATTACATATGTTTGTATTTACTTATATGA-----TGTTTTGTGGTATATGTAATTCTATCTTTTCCAGAAATTACACAGGGGCATGTTTTCATACATGACtgtatggtccatattcattttaggcatagccatattttaagttctttctctgctcttagttatcgtcagagtcttcgacacccagtctggtttcactttccttctctttgagacacagtcatcagaatttcctttagggtcagtgagaaaagctttctttgtccttttatctttcagtgctgtttctttcctgtgttgatcttggaca------gtactatgtaaggaattgtcggtggctggtgatggtatcttagctgggta-aagattttgttctactggcttatgttttcctttttttctgtggggaagacaatgtttggctccctttgaatccttaccagctgatccttttcctccggctaagtttaagggttggttatgcttttttgcagcttttctgtaacgttgaacgtgaggtgtgtttaattcattctgcctggcattcactgcatttcttgaacccatggattgatggatgtgtctacttcctccaaataatcaacaattgcctctttaaagattgcttctgacctgttttctcattctttccttttggaactcaagttaggagcattctaaaactgttgtcagtttttaccctgtcacaaaactgctctttctt-tttcagttgttttctttttctgtgccctaatattgacagtttcctgtggcgtagatgataaatgctctcttcactgttgtgtacacaatgttttaactaattattctgctttaaatttaatgttgactatatctAGATATCACAATTGATTACTGTGTACAGACTTTCttttctatttgcatacacttatggggtacacgtgtaactttgtgacatgaatatattgcagagtggtgaagtcaggactttgactatatccatcacccaaatgctgtacattgtactcgttaagcaatttctcatcacgcacccaggtcccaccaccctccagccttccaagcctccactgtccatcattccacactctacgtccaggtgtatgcactactcgcctcccgcttagagtgagaagatgtggtgtttgtctttctgagttgtttcacgtaaaataatggcctccagttccatccatgTT i rheMac3.chrUn_JH290802 C 0 I 702 s papAnu2.chr19 47729859 2140 + 51301725 TGATCTTAGAGACAAGAGGGAAGAAGCCCTGGGGAGTGTGTTGAAAGGAATTTTCATGTACTTAGGACGCTGGGGATGACCCTAATGTGAGAATGAGCTTGGTGTGTTCCAAGAAGTCCATGGACCTGCCGTATGGTGAGGGCTCCTCAGAATCCAGTGAGATTTCTAGATGTCCTTGTGCTTGTAAGGAGTGTGAGTCCTGTGGTTGCAAGTGGACTCGTACCTTAGGTCAAGTCCAGCAATTCTCTTTCTAAATCCTCTCTAACTGCCTGAACCACTTCTATCAACAACTGAG---AGAAGAGTGTTAAACACCCCACTGTGGCCGTGGATTTGCCTACCTCTCCATTTACTTCAGTGACACTTCCTCCATGTATATTTGCAGGAATATTACTAGGAGTGATTAAGTGTAAATTGATTATATATTCCTgctaaattaaaaatactataaatttaCCTGCTTTTTCCCTAAATTTTATGCTTAATGTTTTCCACTGATTTTTCCCAAAGACttattttgtctaattttattATAACTACACCACATTTCCAACAGTTAGTGATTGCTTGGTATATTTCtacattgtttaatttcaaaCCCTGTGAATTGTTAACACTGACATGTGTCCTTTGTAAATTTC-AACAACGCACCTTAGAAAACAAGACTTGCTGACAATCTTTTGTTCATGTTTGAGCAGTTCTTCCAATCATATTTGTGTTATTATTATGTTGTGTTTTCCTGACTCCC--TTTTTCCCACGGACTTCTTTGGTGGTTTTCTATTTCAAACATTCTATTTTTGATCTATGTTGTTTAGGAATACATATATGGTGTACTCATCCTGAAGTTGTTacgtatttttaaaactgaaattcatCATTTCAGAGATTAAACtgcaaatataaaaacatatttccacTCTTCCTGTGTAAGAACAGGATTTTAGAGTGTATTTATTACATATGTTTGTATTTACTTACATGA-----TGTTTTGTGGTATATATAATTCTATCTTTTCCAGAAATTACACAGGGGCATGTTTTCATACACGACTGTATGGTCCATATTCATTTTTGGCATAGCcatattttaagttctttctCTGCTCTTAGTTATCGTCAGAATCTTCGACACCCAATCTGGtttcactttccttctctttgaGACACAGTCATCAGAATTTCCTTTAGGGTCAGTGAGAAAAGCTTTCTTTGCCCTTTTATCTTTCAGTGCTGTTTCTTTCCTGTGTTGATCTCGGACA------GTACTATGTAAGGAATTGTCGGTGGCTGGTGATGGTATCTTAGCTGGGTACAAGATGCTGTTCTACTggcttatgttttcctttttttctgtgggGAAAACAATGCTTGGCTCCCTTTGAATCCTTACCAGCTGATCCTTTTCCTCCGGCTAAGCTGAAGGGTTGGTTATGCTTTTATGCAGCTTTTCTGTAACGTTGAACATGAGGTGTGTTTAATTCATTCTGCCTGGCATTCACTGCATTTCTTGAACCTATGGATTGATGGATGTGTCTACTTCCTCCAAATAATCAACAATTGCTTCTTTGAAGATTGCTTCTGAcctgttttctcattctttccttttggAACTCAAGTTAGGAGCATTCTAAAACGGTTGTCAGTTTTTACCCTGTCACAAAACtgctctttctt-tttcagttgttttctttttctgtgcactAATATTGACAGTTTCCTGTGGCGTAGATGATAAATGCTCTCTTCACTGTTGTGTACCCAATATTTTAACTAATTATTCTGCTTTAAATTTAATGTTGACTATATCTAGATATCACAATTGATTACTGTGTACagactttcttttctatttgtatacatttatggggtacacgtGTAACTTTGTGACATGAATATATTGCAGAGTGGTGAAGTCAGGACTTCGACTATATCCATCACCCAAATGCTGTACATTGTACTCGTTAAGCAATTTCTCATCACACACCCAGGTCCCACCGCCCTCCAGCCTTCCAAGCCTCCACTGTCCGTCATTCCACACTCTACGTCCAGGTGTATGCACCACTCGCCTCCCGCTTAGAGTGAGAAgatgtggtgtttgtctttctgagttgtttcacgtaaaataatggcctccagttccatccacgtt i papAnu2.chr19 C 0 I 1725 s chlSab2.chr6 47410069 2139 + 50890351 tgatcttagagacaagagggaataggccctggggagtgtgttgaaaggaagtttcatgtacttaggacactggggatgaccctaatgtgagaatgggcttggtgtgctccaagaaGTCCATGGACCTGCCGTATGGTAAGGGCTGCTCAGAATCCAGTGAGATTTCTAAGTGTCCTTGGGCTTGTAAGGAGTGTGAGTCCTGTGGTTGCAAGTGAACTTGTACCTGAAGTCAAGTCCAGCAATTCTCTTTCCAAATCCTCTCTAACTGCCTGAACCACttctatcaacaactgag---agaagagtgttaaacaccccactgtggccgtggatgtgcctacctctccatttacttcagcgacacttcctccatgtatatttgcaggaatattactgggagtgattaagtgtaaattgattatatattcctggtaaattaaaaatactataaatttacctgtttttttcctaaattttatgcttaatgttttccactgatttttcccaaaggcttattttgtctaattttattataactacaccacatttccaacagttagtgattgcttggtatatttctacattgtttaatttcaaaccctgtgaattgttaacactgacttgtgtcctttgtaaaTTTC-AACAACACACCTTAGAAAACAAGATTTGCTGACAATCTTTTGTTCATGTTTGAGCAGTTCTTCCAATCATATTTGTGTTATTATTATGTTGTGTTTTCCTGATTCCC--TTTTTCCCATGGACTTCTTTGGTGGTTTTCTATTTCAAACATTCTATTTTTGATCTATGTCATTTAGGAATACATATATGGTGTACTCATCCTGAAGTTGTTACGTATTTTTAAAACTGAAATTCATCATTTCAGAGATTAAACTGCAAATATAAAAACATATTTCCACTCTTCCTGTGTAAGAACAGGATTTTAGAGTATATTTATTATATATGTTTGTATTTACTTGCATGA-----TGTTTTGTGGTATATATAATTCCATCTTTTCCAGAAATTACACAGGGGCATGTTTTCATACACTACtgtatggtccgtattcatttttggcatagccatattttaagttctttttctgctcttagttattgtcagaatctttaacaccccatctggtttcactttccttctctttgaggcacagtcatcagaatttcctttagggtcagtgagaaaagctttctttgcccttttatctttcagtgctgtttctttcccgtgttgatctcggaca------gtactatgtaaggaattgttggtggctggtgatggtatcttagctgggta-aagatgctgttctactggcttatgttttcctttttttctgtggggaagacaatgcttggctccctatgaatccttaccagctgatccttttcctccggctaagtttaagggttggttctgcttttatgcagtttttctgtaacgttgaacgtgaggtgtgtttaattcattctgcctggcattcactgcatttctcgaacccatggattgatggatgtgtctatgtccatcaaataatcaacaatggcctctttaaagattgcttctgacctgttttctcattctttccttttggaactcaagttaggagcattctaaaactgttgtcagtttttaccctgtcacaaaactgctctttctt-tttcagttattttctttttctgtgccttaatattgacagtttcctgtggtgtagatgataaatactctcttcactgttgtgtacacaatattttaactaattattctgctttaaatttaatgttgactatatctAGATATCACAATTGATTACTGTGTACAGACTTTCttttctatttgtatacatttatggggtacacgtgtaactttgtgacatgaatatattgcagagtggtgaagtcaggactttgactatatccatcacccaaatgctgtacattgtactcgttaagcaatttctcatcacgcatccaggtcccaccgccctccagccttccaagcctccaccgtccgtcattccacactctacatccaggtgtgtgcactactcgcctcccgcatagagtgagaagatgtggtgtttgtctttctgagttgtttcacgtaaaataatggcctccagttccatccatgtt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102735914 0 + 122678785 I e calJac3.chr22 45772694 91198 + 49145316 I a score=147402.000000 s hg38.chr19_GL949747v2_alt 411829 319 + 729520 gctgcaaaagacatggtttta-tttttatgaccaaatagtatttcgttgtgtatacacgcatcctttttttaatccaatcattcattcacagacacttagattgatttcatatctttgc---tattgcaaacagtgctgcaataaacatacaggtgcagatattt------------------------tttgagtagatacccagcagcgggacccctagatcgaatggtgcttctatttttggttctctgccaaatttc--catactgtcttccatagaggctatactaatttacataccggccaacagtgtataagagtttccttttctctgcatccttgccaaca s panTro4.chr19 59744561 319 + 63644993 gctgcaaaagacatggtatta-tttttatgaccaaatagtatttcgttgtgtatacacgcatccttttttaaatccaatcattcattcacagacacttagattgatttcatatctttgc---tattgcaaacagtgctgcaataaacatacaggtgcaggtattt------------------------tttgagtagatacccagcagcgggacccctagatcgaatggtgtttctatttttggttctctgccaaatttc--catactgtcttccatagaggctatactaatttacataccggccaacagtgtataagagtttccttttctctgcatccttgccaaca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56656725 320 + 60714840 gctgcaaaagacatggttttattttttatgaccaaatagtatttcgttgtgtatacacgcatccttttttaaatccaatcattcattcacagacacttagactgatttcatatctttgc---tattgcaaacagtgctgcaataaacatacaggtgcaggtattt------------------------tttgagtagatacccagcagtgggaaccctagatcgaatggtgtttctatttttggttctctgccaaatctc--catactgtcttccatagaggctgtactaatttacgtaccggccaacagtgtataagagtttccttttctctgcatccttgccaaca i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47412208 349 + 50890351 actccaaatgacaggattttatattttatggccaaatactatttcattgttgatacacaccacactttattaatccaatcgttctctcacagtcacttagattgattccatgtctttgctgttgttgcaaacagtgctgcaataaacatacaggtgcaggtatttgtttgacataagtgctgcttctcctttgggtagacaccccacagtgggagcgctaggtcgaatggtgtttctattcttggttctctgacagatctcctcatgctgtcttccacagaggctatactaatttacattctgacccacagtgtataagagtttccttttctctgcttccttgccaaca i chlSab2.chr6 C 0 I 16 e canFam3.chr1 102735914 0 + 122678785 I e calJac3.chr22 45772694 91198 + 49145316 I e papAnu2.chr19 47731999 1725 + 51301725 I e rheMac3.chrUn_JH290802 18239 702 + 40826 I a score=81467.000000 s hg38.chr19_GL949747v2_alt 412148 318 + 729520 cctgttatatgtttcactttttc----tttttttctttttgagatggagtcttccactgtcacccaggctggagtgcagtgccgccatctccacgcgctgcaacctccaccaaccaggttcaaatgattctcctgcctcaacctcctgagtagctgggattacagaaccacaccaccatgcccagctaatcttttgtatatttagtagagatggggtttcactatgttggtcaggctggtctcaaactcctgacctcatgatccacccgcctcagcttcccaaagtgctgggattacaagcgtgagccaccactccccacca s panTro4.chr19 59744880 318 + 63644993 cctgttatatgtttcactttttc----tttttttctttttgagatggagtcttccactgtcacccagcctggagtgcagtggcgccatctccacgcgctgcaacctccaccacccgggttcaaatgattctcctgcctcagcctcctgagtagctgggattacagaaccactccaccacgcccagctaatcttttgtatatttagtacagacggggtttcactatgttggtcaggctggtctcaaactcctgacctcatgatccacccgcctcagcatcccaaagtgctgggattacaggcgtgagccaccactccccacca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56657045 322 + 60714840 cctgttatatgtttcactttttctttttttttttttttttgagattgagtcttccactgtcgcccaggctggagtgcagtggcaccatctccacgtgctgcaacctccaccaaccgggttcgaatgattctcctgcctcagcctcctgagtagctgggattacagaaccacaccaccacgcccagctaatcgtttgtatatttagtagagacggggtttcactatgttggtcaggctggtcttgaactcctgacctcctgatccaccggcctcaccctcccaaagtgctgggattacaggtgtgagccactgctccccacca i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102735914 0 + 122678785 I e calJac3.chr22 45772694 91198 + 49145316 I e chlSab2.chr6 47412557 16 + 50890351 I e papAnu2.chr19 47731999 1725 + 51301725 I e rheMac3.chrUn_JH290802 18239 702 + 40826 I a score=559946.000000 s hg38.chr19_GL949747v2_alt 412466 703 + 729520 gcatttttagtaatagccattctgactactgtaagatgatatctcattgtggtttcaatttgcatttctctgatgattagtga-----------tgttcatacgctgtttggccattcgtatgtcttcttttgaaaaatgtctatgtatatccctttgcccactttttaatgctattatttgaggggttatgtttagttgtttgagttgcctagaaattctggatgttagtcccctgttgggtgcatagtttgcaaacatttccattcattctgtgggttgtctgttcaccctgctactatttcctttgcttggcagaagctctttcgtttattaagtcccattggtctagttttatttttattgcctgtgcttttgaggtcttagtgatgaattctttgcccagaccaatgcccagaagagtttctctttgggtttccaccggtgattttatagttctggatttacatttaagctgctaattaccttaagttaatttatgtgtatgattacagatacaggtccagttttattcttctgcatatggctatttagttttcccagcaccttttattgaaaaggaaatctttctccagggtatgttttgttaacgtcgtcaatgattattcactgtagatatgaggctgtatttctgggctctctattctggtctattgatctctgtttctgtgtctataccagcactgtgctattt s panTro4.chr19 59745198 714 + 63644993 gcatttttagtaatagccattctgactactgtaagatgatatctctttgtggtttcaatttgcatttctctgatgattagtgatgttggacatttgttcatatgctgtttggccattcgtatgtcttcttttgaaaaatgtctgtgtatatccctttgcccactttttaatgttattatttgaggggttatgtttagttgtttgagttgcctagaaattctggatgttagtccccggttgagtgcatagtttgcaaacatttccattcattctgtgggttgtctgttcaccctgctactatttcctttgcttggcagaagctcttttgtttattaagtcccgttggtctagttttatttttattgcctgtgcttttgaggtcttagtgatgaattctttgcccagaccaatgcccagaagagtttctctttgggtttccaccagtgattttatagttctggatttacatttaagctgctaattaccttaagttaatttatgtgtataatgacagatacaggtccagttttattcttctgcatatggctatttagttttcccagcaccttttattgaaaaggaaatctttctccagtgtatgttttgttaacgtagtcaatgattattcactgtagatatgaggctgtatttctgggctctctattctggtctattgatctctgtttctgtgtctataccagcactgtgctattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56657367 711 + 60714840 gcatttttaataatagccattctgactactgtaagatgatatctcattgtggtttcaatttgcatttctctgatgactagtgatgttgaacatttgttcgtatgctgtttggccagtcgtatgtcatcttctgaaaaatgtgtatgaatatccctttgcccactttttaatgctattatttgaggggtta-gtttagttgtttgagttgcctagaaattctggatgttagttccctgttggatgcatagtttgcaaacattttctttcattctgcaggttgcctgttcactctgctattatttcctttgctgggcaggagctctttcatttattaagtcctgttggtctagttttatttttattgcctgggcttttgaggtcttagtgatgaattctttgcctagagcaatgtccagaagagtttctctttgggtttccactggtgattttatagttctgtttttgcatttaagctgttaatta--ttaagttaatttttgtgtataatgacagatatgggtccagttttattcttctgcatatggctatttagttttcccagcaacatttattcaaaaggatatctttccccagtgtatgttttgttgactttgtcaaagattattcactgtagatatgaggctgtatttctgggctctctattctggtctattgatctctgtttctatgtctataccagcaccgtgctattt i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 18941 713 + 40826 gcattttcagtaatagccattctgactactgtaagatgatatctcattgtggtttcaatttgcatttctctgatgagtcttgatgctgaacacttgttcataggctgtttggccattcgtatgtcttcttttgaaaaatctgtgtaaacattcctttgcccacttttgaatgctattatttga-gggttgtgattagttgtttgagttgcctagaaattgtggatgttagtcccctgtcggatgcacagtttaaaaacattttctttcattctgcaggtcgtcggttcactctgctattatttcctttgctattcagaagttctttcgtttactaagtcccatttgtctagttttatttttgttgcctgtggttttgaggttttactgatgaattctttgcctagaccaatgtccaggagagtttctctttgcatttccacctgtgattttatagttctgggtttacatttaagccgttaattatcttacattaatttttgtgtataatgacagatatgagtccagttttattcttctgcctatgactatttagatttctcagcactatttatggaaaagcatatctttccccagtgtatgttttgttgactttgtccatgatcattcactgtagatacgaggctgcatttttgggctctctattctggtctattgatctctgtttctatgtctataccagcaccgtgctgttt i rheMac3.chrUn_JH290802 I 702 C 0 s chlSab2.chr6 47412573 713 + 50890351 gcattttcagtaatagccattctgactactgtaagatgatatctcgttgtggtttcaatttgcatttctctgatgagtcgcgatgctgaacacttgttcatatgctgtttggccattcgtatgtcttcttttgaaaaatctgtgtaaacatccctttgcccactttttaatgctattatctga-gagctgtgattagttgtttgagttgcctagaaattgtggatgttagtcccctgtcggatgcacagtttgcaaacattttcgttcattctgcaggtcgtcggttcactctgctattatttcctttgctgttcagaagttttttcgtttactaagtcccatttgtctagttttatttttgttgcctgtggttttgaggttttactgatgaattctttgcctagaccaatgtccaggagagtttctctttgcatttccacctgtgattttatagttctgggtttacatttaagccgttaattatcttacattaatttttgtgtataatgacaggtatgagtccagttttattcttctgcctatgactatttagatttctcagcactatttatggaaaagcatatctttccccagtgtatgttttgttgactttgtccatgatcattcactgtagatacgaggctgtatttttgggctctctattctggtctattgatctctgtttctgggtctataccagcaccgagctgttt i chlSab2.chr6 I 16 C 0 e canFam3.chr1 102735914 0 + 122678785 I e calJac3.chr22 45772694 91198 + 49145316 I e papAnu2.chr19 47731999 1725 + 51301725 I a score=236862.000000 s hg38.chr19_GL949747v2_alt 413169 195 + 729520 aagttactatagccttagagcatagtttgaagtcagatagcgtgatgcctccaggtttctacattcacctagaattgctttctctattaggatcttttttggttctgtatgaattttaggattgctttttctaattctgtgaaaactggtgttactattttcatataagaattgcactgaatctgtagattgctt s panTro4.chr19 59745912 195 + 63644993 aagttactatagccttagagcatagtttgaagtcagatagcgtgatgcctccaggtttctacattcacctagaattgctttctctattaggatcttttttggttctgtatgaattttaggattgctttttctaattctgtgaaaactggtgttactattttcatataagaattgcactgaatctgtagattgctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56658078 195 + 60714840 cagttactatagccttagagcatagattgaagtcagatagcgtgatgcctccaggtttctacatttccctagaattgctttgtctattaggattttttttggttctgtatgaattttaggattgctttttctaattctgtgaaaactggtgttactattttcatataagaattgcactgaatctgtagattgctt i ponAbe2.chr19 C 0 I 2787 s rheMac3.chrUn_JH290802 19654 192 + 40826 aagttactatacccttagagcataatttgaagtcagagagcctgatgactccaagtttctacacttgcctagaattgctttgtctatgaggctcttttttggttctgtatgaattttaggattgctttttctaattctgtgagacctggtgttactattttcatttaagaattgcactaaatctgtagattg--- i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47733724 192 + 51301725 aagttactatacCCTTagagcataatttgaagtcagagagCCTGATGACTCCAAGTTTCTATACTTGCCTAGAATTGCTTTGTCTAtgaggctcttttttggttctgtatgaactttaggattgctttttctaattctgtgagaccTGGTGTTACTATTTTCATTTAAGAATTGcactaaatctgtagattg--- i papAnu2.chr19 I 1725 C 0 s chlSab2.chr6 47413286 195 + 50890351 aagttactatatccttagagcataatttgaagtcagagagcctgatgactccaagtttctacatttgcctagaattgctttgtctattaggctctttttaggttttgtatggattttaggattgctttttctaattctgtgagacctggtgttactattttcatttaagaattgcactgaatctgtagattgctt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102735914 0 + 122678785 I e calJac3.chr22 45772694 91198 + 49145316 I a score=273.000000 s hg38.chr19_GL949747v2_alt 413364 1 + 729520 t s panTro4.chr19 59746107 1 + 63644993 t i panTro4.chr19 C 0 C 0 s chlSab2.chr6 47413481 1 + 50890351 t i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102735914 0 + 122678785 I e ponAbe2.chr19 56658273 2787 + 60714840 I e calJac3.chr22 45772694 91198 + 49145316 I e papAnu2.chr19 47733916 0 + 51301725 C e rheMac3.chrUn_JH290802 19846 0 + 40826 C a score=1110618.000000 s hg38.chr19_GL949747v2_alt 413365 931 + 729520 aggcagtatggtcattttaacaatattaattcttatgatccatgagcgtgggattttttttctttttttttttgtattatctataattgctttcattggtgtcttacacctttcctggtacagatctttcaccaccttggttaaatgtattcctgagtgttttaattttgcgtatctattgtaaacggcattgccttcttgatttggttctcagctagatcattataggtgtagagaaatgctaccggcttttacatattgattttgtattctgaaactttacttagttcatttatcaatcataagaatttttggcagggtctttaggattttctagatttaagatcatagcatcagaaataaaaataattttacttcctcttttctaatttggat---ttttacttcttcctgttgcccaatagctctgacaaggcttccagtactatgttgataggaagtggtggatgtccgtgtccttgtcttgtgccagttctcagagg------agtgcttttaactttt-cctgttcagtatgatgttgactctagatatgtcatctatggcttttattattttgaggtatgttctttctatgcctaagtttttgagggttttcatcaggtaaggatgttgaatttctttt-cagatgcttttctttatgtctattgagatgatcatatggtttttgttctggattctgctCGTTCttctaagtggatgagacatgccagaaaagcatttagtcagccatcttggaaacaaGCATCTCAGATGTTTTCTTTCTCTATAGCTCATTCTTTCTTACCAGTGTTTTCAATTTTGTACTTAATTTTGTAAAGAGAGTAAATGATATAATTTCCACATATGTTTCCTCTGCCAAATCAGACTCACTATGCTTCCTTTCCTTGTATGCATAACCTACCCAGCAATACACACA s panTro4.chr19 59746108 930 + 63644993 aggcagtatggtcattttaacaatattaattcttatgatccatgagcgtgggattttttttctttttttttt-gtattatctataattgctttcattggtgtcttacacctttcctggtacagatctttcaccaccttggttaaatgtattcctgagtgttttaattttgcgtatctattgtaaacggcattgccttcttgatttggttctcagctagatcattataggtgtagagaaatgctactggcttttacatattgattttgtattctgaaactttacttagttcatttatcaatcataagaatttttggcagggtctttaggattttctagatttaagatcatagcatcagaaataaaaataattttacttcctcttttctaatttggat---ttttacttcttcctgttgcccgatagctctgacaaggcttccagtactatactgataggaagtggtggatgtccgtgtccttgtcttgtgccagttctcagagg------agtgcttttaactttt-cctgttcagtatgatgttgactctagatatgtcatctatggcttttattattttgaggtatgttctttctatgcctaagtttttgagggttttcatcaggtaaggatgttgaatttttttt-cagatgcttttctttatgtctattgagatgatcatatggtttttgttctggattctgctCGTTCttctaagtggatgagacatgccagaaaagcatttagtcagccatcttggaaacaaGCATCTCAGATGTTTTCTTTCTCTATAGCTCATTCTTTCTTACCAGTGTTTTCAATTTTGTACTTAATTTTGTAAAGAGAGTAAATGATATAATTTCCACATATGTTTCCTCTGCCAAATCAGACTCACTATGCTTCCTTTCCTTGTATGCATAACCTACACAGCAATACACACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56661060 927 + 60714840 aggcagtatggtcattttaacaacattaattcttatgatccgtgagcgtggaattttttttctttttttt---gtgttatctataattgctttcattggtgtcttaca-ttttcctggtagagatctttcactaccttggttaaatatattcctgagtgttttaattttgcgtatctattgtaaacgggattgccttcttgatttggttctcagctagatcattataggtgtaaagaaatgctaccggtttttatgcattgattttgtattctgaaactttacttagttgatttatcaatcataagaatttttggcagggtctttaggattttctagatttaagatcatagcatcagaaataaaaataattttacttcctcttttctaatttggat---ttttacttcttcctgttgcccgatagctctgacaaggcttccagtactatgttgatagagagtggtggatgtccgtgtccttgtcttgtgccagttctcagagg------agtgcttttaactttt-cctgttcagtatgatgttgactctaggtttctcatctatggcttttattactttgaggtatgttctttctatgcctaagtttttgagggttttcatcaggtaaggatgttgaattttttttacagatgcttttctttatgtctattgagatgaccatatggtttttgttctagattctgctcatTCttctaagtggatgagacatgccgaaaaagcatttagtcagccatcttggaaacaaGCATCTCAGATGTTTTCTTTCTCTATAGCTCATTCCTTCTTACCAGTGTTTTCAATTTTCTACTTAATTTTGTAAAGAGAGTAAATGATATAATTTCCACATATGTTTCCTCTGCCAAATCAGACTCACTCTGCTTCCTTTCCTTGTATGCATAACCTGCACAGC-ATACACACA i ponAbe2.chr19 I 2787 C 0 s rheMac3.chrUn_JH290802 19846 919 + 40826 ------------cattttaacaatattaattcctatgatccatgagcatggaa-----tttttttcttttttggtatcatctataattgctttcatgggtgtcttacactcttcctggtagagatctttcaccaccttggttaagtgtattcctcagtgttttaattttgtgtatctattgtaaatgg-gttgccttcttgatttggttctcagttagatcattataggtgtagagaaatgctaccgggttttacacattgattttttactctgaaactttactgagttcacttttcaatcataagaattttt-tcagagtctttaggattttctagatttaagatcatagcatcagcaatagaaataattgcacttcctcttttctaatttagtcatgttttatttcttcctgtggcctgatagctctgacagagcttccagtactatattgatagggagtggtgcatgtctgtgtccttgtcttgtgccagttctcagaggagtc--agtcattttaacttctccctgctcagta-gatgttgactttaggtatgtcatctatggcttttattactttgaggtatattctttctatgcctaattttttgagggttttcatcaggtaaggacgttgaattttttta-aagatgcttttctttatgtctattgagatgatcacatgtttttggttctggattcGGCTCACTCTTCCAGGTGGATGACATATGCCAAAAAAGCACTTAGTCAGCCATCTTGGAAACAAGCATCTCAGATGTTTTCTTTCTCTACAGCTCATTCTTCCTTATCAATGTTTTCAATTTTGTACTTAATTTTATAAAGAGAGTAAATGATATAATTTCCACATACGTTTCCTCTGCCAAATCTGACTCACTGTGCTTTCTTTCCTTGTATGCATAACCTGCCCAGCAATACACACA i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47733916 927 + 51301725 ------------cattttaacaatattaattgctatgatccatgagcgtggaatttcttttctttttttttttgtatcatcTATAATTGCTTTCATGGGTGTCTTACACTCTCCctggtagagatctttcaccaccttggttaaatgtattcctcaGTGTTTTACTTTTGTGTATCTATTGTAAATGG-GttgccttcttgatttggttctcagttaGATCATTATAGGTGTGGAGAAATGCTGTCGggttttacacattgattttgtactctgaaactttactgagttCATTTTTCAATCATAAGAATTTTT-TCAGAgtccttaggattttctagaCTTAAGATCATAGCATCAGCAATAGAAATAATTGCACTTCCTCTTTTCTAGTTtagttatgttttatttcttcctgtggcCTGAGAGCTCTGACAGggcttccagtactgtgttgataGGGAGTGGTGGATGTCTGTGTCCTTGTGTTGTGCCAGTTCTCAGAGGAGTCAGAGTCATGTTAACTTTTCCCTgctcagtatgatgttgactttAGGTATGTCATctatggcttttattactttgaggtatatTCTTTCTATGCCTAATTTTTTGAGGGTTTTCATCAGGTAAGGacgttgaattttttta-aagatgcttttCTTTatgtctgttgagatgatcacatgTTTTTGGTTCTGGATTTGGCTCATTCTTCCAGGTGGATGACATATGCCAAAAAAGCACttagtcagccatcttggaaaCAAGCATCtcagatgttttctttctctacagGTCATTCTTCCTTACCAGTGTTTTCCATTTTGTACTTAATTTTGTAAAGAGAGTAAATGATATAATTTCCACATATGTTTCCTCTGCCAAATCTGACTCACTGTGCTTTCTTTCCTTGTATGCATAACCTGCCCAGCAATACACACA i papAnu2.chr19 C 0 I 165 s chlSab2.chr6 47413482 933 + 50890351 aggcaatatgatcattttaacaatattaattcctatgatccatgagcatggaa----ttttttttcttttcttgtatcatctataattgctttcatgggtgtcttacactcttcctggtagagatctttcactaccttggttaaatgtattcctcagtgttttacttttgtgtatctattgtaaatgg-gttgccttcttgatttggttctcagttaaatcattattggtgtagagaaatgctactgggttttacacactgattttgtattctgaaacttcactgagttcatatttcaatcataagaattttt-tcagagtctttaggattttctagatttaagatcatagcatcagcaatagaaataattgcacttcctcttttctaacttagatatgttttatatcttcctgtggcctgatagctttgacagggcttccagtactgtgttgatagggagtggtggatatctgtgtccttgtcttgtgccagttctcagaggagtc--agtcattttaacttttccctactcagtatgatgttgactctaggtatgtcatctacggcttttattactttgaggtatattctttctatgcctaatttattgagggttttcatcaggtaaggacgttgaattttttta-aagatgctttcctttttgtctattgagatgatcacatgtttttggttctggattcggcttatTCTTCCAGGTGGATGAGATATGCCAAAAAAGCATTTAGTCAGCCATCTTGGAAACAAGCATCTCAGATGTTTTCTTTCTCTACAGCTCATTCTTCCTTACCAGAGTTTTCAATTTTGTACTTAATTTTATAAAGAGAGTAAATAATATAATTTCCACGTATGTTTCCTCTGCCAAATCTGACTCACTGTGCTTTCTTTCCTTGTATGCATAACCTGCCCAGCAATACACACA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102735914 0 + 122678785 I e calJac3.chr22 45772694 91198 + 49145316 I a score=3730.000000 s hg38.chr19_GL949747v2_alt 414296 4 + 729520 AACA s panTro4.chr19 59747038 4 + 63644993 AACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56661987 4 + 60714840 AACA i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 20765 4 + 40826 AACA i rheMac3.chrUn_JH290802 C 0 C 0 s chlSab2.chr6 47414415 4 + 50890351 AACA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102735914 0 + 122678785 I e calJac3.chr22 45772694 91198 + 49145316 I e papAnu2.chr19 47734843 165 + 51301725 I a score=325434.000000 s hg38.chr19_GL949747v2_alt 414300 259 + 729520 TTTATTGCTTTGGAGAATTAGTTTGGGAACATTTTTGAAATGT------ACAA-AAAAATGTATATCTTCAAAAGAAATTTCTTTTTGTGGCAAAAGACTTCTGAAGGTGCTCATGATGATATAGGGAGAAGAGGGGTTCTGGACAGGAAGAATTTTATGAAGGTGAGATGGGGAAATAGCTCCATTTCAGAGCTTCTGGGGAGAGAGGGGCCTGGCCCACATGGAAAGGTCTCTGATCTTACCCCCACCCTCCAGCCCCTGTTCT s panTro4.chr19 59747042 259 + 63644993 TTTATTGCTTTGGAGAATTAGTTTGGGAACATTTTTGAAATGT------ACAG-AAAAATGTATATCTTCAAAAGAAATTTCTTTTTGTGGCAAAAGACTTCTGAAGGTGCTCATGATGATATAGGGAGAAGAGGGGTTCTGGACAGGAAGAATTTTATGAAGGTGAGATGGGGAAATAGCTCCATTTCAGAGCTTCTGGGGAGAGAGGGGCCTGGCCCACATGGAAAGGTCTCTGATCTTACCCCCACCCTCCAGCCCCTGTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56661991 260 + 60714840 TCTATTGCTTTGGAGAATTAGTTTGGGAACATTTTTGAAATGT------ACAGAAAAAATGTATATCTTCAAAAGAAATTTCTGTTTGTGGCAAAAGGCTTCTGAAGGTGCTCATGATGATATAGGGAGAAGAGGGGTTCTGGACAGGAAGAATTTTATGAAGGTGAGATGGGGAAATAGCTCCATTTCAGAGCTTCTGGGGAGGGAGGCGCCTGGCCCACATGGAAAGGTCTCTGATCTTACCCTCACCCTCCAGCCCCTGTTCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 20769 263 + 40826 TTTATTGCTTTGGAGAATTAGTTTGGGAACTATTTTGAAATGT-AAAAAAAAA-AAAAATGTGTATCTTCAAAAGAAATTTCTGTTTGTGGCAAAAGGCTTCTGAGCGTGCTCAGGATGATATAGGGAGAAGAGGGGCTCTAGACAGGAAGAATTTTGTGAAGGTGAGATGGGGAAATAGCTCCATTTCAGAGCTCCTGGGGAGGGA-GGGCCTAGCCCACATGGAAAAGTCTCTGATCTTACCCCCACCCTCCAGCCCCTGTTCT i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47735008 265 + 51301725 tttattgCTTTGGAGAATTAGTTTGGGaatgattttgaaatgtaaaaaaaaaa-aaaaaagtgtatcttcaaaagaaatttctgtttGTGGCAAAAGGCTTCTGAAGGTGCTCAGGATGATATAGGGAGAAGAGGGGATCCGGACAGGAAGAATTTTGTGAAGGTGAGATGGGGAAATAGCTCCATTTCAGAGctcctggggagggaggggcctAGCCCACATGGAAAAGTCTCTGATCTtacccccaccctccagcccctgTTCT i papAnu2.chr19 I 165 C 0 s chlSab2.chr6 47414419 259 + 50890351 TTTATTGCTTTGGAGAAT--GTTTGGGAACTATTTTGAAATGT----AAAAAA-CAAAATGTGTATCTTCAAAAGAAATTTCTGTTTGTGGCAAAAGGCTTCTGTAGGTGCTCAGGATGATATAGGGAGAAGAGGGGTTCCGGACAGGAAGAATTTTGTGAAGGTGAGATGGGGAAATAGCTCCATTTCAGAGCTCCTGGGGAGGGAGGGGCCTAGCCCACATGGAAAAGTCTCTGATCTTACCCCCACCCTCCAGCCCCTATTCT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102735914 0 + 122678785 I e calJac3.chr22 45772694 91198 + 49145316 I a score=228228.000000 s hg38.chr19_GL949747v2_alt 414559 153 + 729520 CCAGAACTATACTGTGGAGAGTTCCATCAGGATTGTTGTGGCTGGTCTGGTCTTCCTGGCTCTTTTGGCAATGCTGGCTAAGACCTGGTGGAGACATGAGGGGCCACAGGTGGAAATGGAAGA-------AACATGACTGAAGCTGGCTGGAGTGAATGG s panTro4.chr19 59747301 153 + 63644993 CCAGAACTATACTGTGGAGAGTTCCATCAGGATTGTTGTGGCTGGTCTGGTCTTCCTGGCTCTTTTGGCAATGCTGGCTAAGACCTGGTGGAGCCATGAGGGGCCACAGGTGGAAATGGAAGA-------AACATGACTGAAGCTGGCTGGAGTGAATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56662251 153 + 60714840 CCAGGACTATACTGTGGAGAATTCCATCAGGATGGTTGTGGTCGGTCTGGTCTTCCTGGCACTTTTGGCAATGCTGGCTAAGACCTGGTGGAGCCATGAGGGGCCACAGGTGGAAATGGAAGA-------AACATGACTGAAGCTGGCTGGAGTGAATGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 21032 153 + 40826 CCAGGACTATACTGTGGAGAATTCCATCAGAATGGCTGTGGCTGGTCTGGTCTTCCTGGCTCTTTTGGCAATGCTGGCTAAGACCTGGTTCAGCCATGCGGGGACACAGGTGGAAATGGAAGA-------AACGTGACTGAAGCTGGCAGGAGTGAATGG i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47735273 153 + 51301725 CCAGGACTATACTGTGGAGAATTCCATCAGAATGGCTGTGGCTGGTCTGGTCTTCCTGGCTCTTTTGGCAATGCTGGCTAAGACCTGGTTCAGCCATGCGGGGACACAGGTGGAAATGGAAGA-------AACGTGACTGAAGCTGGCAGGAGTGAATGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47414678 153 + 50890351 CCAGGACTGTACTGTGGAGAATTCCATCAGAATGGCTGTGGCTGGTCTGGTCTTGCAGGCTCTTTTGGCAATGCTGGCTAAGACCTGGTTCAGCCATGCGGGGACACAGGTGGAAATGGAAGA-------AACGTGACTGAAGCTGGCTGGAGTGAACGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45863892 154 + 49145316 CCAAGATCACACGGTGCAGAACCTGATCCGCATGGCCGTGGCAGGACTGGTCCTCATGGCTCTCTTGGCCATACTGGCTGAAAACTGGTACAGCCATAGGGCGT------TAGGCAAGGAAGCCTCGGCTGACGTGGCTGAACTGAGCTGGAGCAAGCGG i calJac3.chr22 I 91198 T 94120 e canFam3.chr1 102735914 0 + 122678785 I a score=1875.000000 s hg38.chr19_GL949747v2_alt 414712 2 + 729520 CG s panTro4.chr19 59747454 2 + 63644993 GG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56662404 2 + 60714840 CG i ponAbe2.chr19 C 0 I 1302 s rheMac3.chrUn_JH290802 21185 2 + 40826 CG i rheMac3.chrUn_JH290802 C 0 I 1331 s papAnu2.chr19 47735426 2 + 51301725 CG i papAnu2.chr19 C 0 I 1325 s chlSab2.chr6 47414831 2 + 50890351 CG i chlSab2.chr6 C 0 I 1318 e canFam3.chr1 102735914 0 + 122678785 I e calJac3.chr22 45864046 94120 + 49145316 T a score=100.000000 s hg38.chr19_GL949747v2_alt 414714 1 + 729520 C s panTro4.chr19 59747456 1 + 63644993 C i panTro4.chr19 C 0 C 0 e canFam3.chr1 102735914 0 + 122678785 I e ponAbe2.chr19 56662406 1302 + 60714840 I e calJac3.chr22 45864046 94120 + 49145316 T e chlSab2.chr6 47414833 1318 + 50890351 I e papAnu2.chr19 47735428 1325 + 51301725 I e rheMac3.chrUn_JH290802 21187 1331 + 40826 I a score=2489686.000000 s hg38.chr19_GL949747v2_alt 414715 2044 + 729520 GACATTCTGTCTGTGGGAGATTGGCCAGATGGGTTTCAAGTGTGTTGTATCAGCTGTGACTTTTAGTAATGTTCTTG--------------CTACCACAATATCCACTCGTCCATCCCGAATAATTGTGATGAAATATTGTCCTTGGGATAATATTCATTTGCTAAAGACAGGGATGATACCTCAAGGTGCCACTATATACATCGAGGGGATCCACAAAAGTCCATTCAGTAAAATGTAGTTGGCATCTTAGGGTAGGTTGATTCCACCTCTAAAAAAGTAGGTACAACATCAGGTTGATTTTTCCGAAGAAAAGTGGTGATTGGCCATCTTTAGTCTCAATGTAAACGGTAATACTGATGAGTGTGGAAAAGGCAGGGAAGAGGATTGACAATAAGTGACACTCATTGTTTTCATCTGAGCTTTGAGACTGAAAGAGGAACACAGGAGTGAGATGTATGGGAACAAACCCCTTCTTTTTCCAGCTAAACAGAGTGGAAGTTGGACACTGAGTTTTGGCGTACAGCAAAATCCTAAGTCCATTGTTGGGTTGAACACGGCCATGTTGTACATCCTGGTTTCACAGCAGACACTGGAGGAAAACAGCCTGTATTCATAAGAGGCTGTCCCTCGGGTCACTGCCCAGAATATCCGGAGTTGGTGCTCACAGGGTTGGGAACTCTCCTGGACCAGACAGGCTCTGGATATGGGGGGGTACCAAGCTCCCCGGGGCCATGCCTCCACAGCTCTCTTCTCACCTCA-TTCTTGACCATTTCCCAAACCTCTGACCTCACCTTCATTCATCCATGGTGAACACGC----TAAAGCTGGCCTTCAAAGCTTGAGACAGAGGAAAATTGGGCTTCATCTCTGGGAACTA-AATTGGGGAGTGGAGACTCAGTTCTGGCCTGACAGGAGGGAGAAGACCCTGGATCCCAGTGTGGATGGGAAGAAGTATGTGTTTCTCTTTTGTGCTTGGACCCTGTGTCCAAGCATGTCTGAGATGTGATGAAGATGAATCTTCCTTTCCTTGTCTATTTTCTCATGCCAGAGAATTGGAATCTTATATTCCATTAACTCTTTCTGTTCTGTTCATCCAGATTCTATGAAGGAGAAAGGAAAAGATGTGATACTGTAATTTTGCTCCATTTGTCTAAAATGAGTAGGCTGCAACTCCTCTTGAAGTGATACCTTTTCTAGCTCTTGTTGGAGGTGTCTCAGGACTCATTACTTCGGGGAACCTGCAACTGTGTCAGTCTGGGGAAACTGCAAATATTCTTGTCTTACATTTGTCTCCAGCCAATTGTGATGGACTCCAGTGACCTGCAATTGCTGTTATTGCAGGTAAAATGTACCTGAGTCAGGCCACAGTTCTCCTGGACTATGAGCCCCTGGCCATGTTCCTGAGGCAATTCTGTTCATCTAAATAT-AATAATAATAACACACTAAAAATGGCAAGCCATTGTTAATTCCTGAAGTCTCATTTGAAAATTACTAAATGTCTGTTATTTTTTGGTGTTTACATTATATGTAGACAGATAAACT----------acacacacacacacacacacacatgcacac--aGAAGAATGGATTGGTTCATGTAGAAAAGTAAATAATTCAAGATGAAAGGATGAAATGTCATGGCACCTACTATTCTATTTTAGATAAAGGGTCTATGAAAA-GATTGATTTCTTTTTATGTTTTATTTGTTGACATTTGAACACAAACTATGTAAGTGAGGGAGTCGATTTGAAAGGGAGAAGAGCAAGTTCAAACACATTCAGGTGAGGTCATGCTTTACATGTTTTAATTGAAATGATCCATCTTGGGAGTAGATCAATAACTGAGATGGTGCCAGGAATGTTAAAAAGCTTTTGTCagtcctaaatattgacaaat-------------------------------------------------------------aaaatttaattaaagtcttagaagaaaacacaaagg-aaaacttcacaacatcggatttggcagtgattctttagatgtgacaacaacggcacaggctactacagaaaaaataaacaagttagactttatgaaaattttgaaatattgtgactcaaaagacaacatcag s panTro4.chr19 59747457 2037 + 63644993 GACATTCTGTCTGTGGGAGATTGGCCAGATGGGTTTCAAGTGTTTTGTATCAGCTGTGACTTTTAGTGATGTTCTTG--------------CTACCACAATATCCACTCGTCCATCCCGAATAATTGTGACGAAATATTGTCCTTGGGATAATATTCATTTGCTAAAGACAGGGATGATACCTCAAGGTGCCACTATATACATCGAGGGGATCCACAAAAGTCCATTCAGTAAAATGTAGTTGGCAACTTAGGGTAGGTTGATTCCACCTCTAAAAAAGTAGGTACAACATCAGGTTGATTTTTCCGAAGAAAAGTGGTGATTGGCCATCTTTAGTCTCAATGTAAACCGTAATACTGATGAGTGTGGAAAAGGCAGGGAAGAGGATTGACAATAAGTGACACTCATTGTTTGCATCTGAGCTTTGAGACTGAAAGAGGAACACAGGAGTGAGATGTAGGGGAACAAACCCCTTCTTTTTCCAGCTAAACAGAGTGGAAGTTGGACACTGAGTTTTGGCGTACAGCAAAATCCTAAGTCCATTGTTGGGTTGAACGTGGTCATGTTGTACATCCTGGTTTCACAGCAGACACTGGAGGAAAACAGCCTGTATTCATAAGAGGCTGTCCCTCGGGTCACTGCCCAGAATATCCGGAGTTGGTGCTCACAGGGTTGGGAACTCTCCTGGACCAGACAGGCTCTGGTTAT-GGGGGGCACCAAGCTCCCCGGGGCCATGCCTCCACAGCTCTCTTCTCACCTCA-TTCTTGACCATTTCCCAAACCTCTGACCTCACCTTCATTCATCTATGGTGAATACAC----TAAAGCTGGCCTTCAAGGCTTGAGACAGAGGAGAATTGGGCTTCATCTCTGGGAACTA-AAGTGGGGAGTGGAGACTTAGTTCTGGCCTGAGAGGAGGGAGAAGACCCTGGATCCCCGCATGGATGGGAAGAAGTACGTGCTTCTCTTTTGTGCTTGGACCCTGTGTCCAAGCATGTCTGAGATATGATGAAGATGAATCTTCCTTTCCTTGTCTATTTTCTCATGCCAGAGAATTGGAATCTTATATTCCATTAACTCTTTCTGTTCTGTTCATCCAGATTCTATGAAGGAGAAAGGAAGAGATGTGATACTGTAATTTTGCTCCATTTGTCTAAAATGGGTAGGCTGCAACTCCTCTTGAAGTGATACCTTTTCTAGCTCTTGTTGGAGGTGTCTCAGGACTCATTACTTCGGGGAACCTGCAACTGTGTCAGTCTGGGGAAACTGCAAATATTCTTGTCTTACATTTGTCTCCAGCCAATTGTGATGGACTCCAGTGACCTGCAATTGCTGTTACTGCAGGTAAAATGTACCTGAGTCAGGCCACAGTTCTCCTGGACTATGAGCCCCTGGCCATGTTCCTGAGGCAATTCTGTTCATCTAAATAT-AATAATAATAACACACTAAAAATGGCAAGCCATTGTTAATTCCTGAAGTCTCATTTGAAAATTACTAAATGTCTGTTATTTTTTGGTGTTTACATTATATGTAGACAGATAAACT----------------ACACACACACACACACATGCACAA--AGAAGAATGGATTGGTTCATGTAGAAAAGTAAATAATTCAAGATGAGAGGATGAAATGTCATGGCACCTACTATTCTATTTTAGATAAAGGGTCTATGAAAA-GATTGATTTCTTTTCATGTTTTATTTGTTGACATTTGAACACAAACTATGTAAGTGAGGGAGTCGATTTGAAAGGGAGAAGAGCAAGTTCAAACACATTCAGGTGAGGTCATGTTTTACATGTTTTAATTGAAATGATCCATCTTGGGAGTAGATCAATAACTGAGATGGTGCCAGGAATGTTAAAAAACTTTTGTCagtcctaaatattgacaaat-------------------------------------------------------------aaaatgtaattaaactcttagaagaaaacacaaagg-aaagcttcacaacatcggatttggcagtgattctttagatgtgacaacaacggcacaggctactacagaaaaaataaacaaattagactttatgaaaattttgaaatattgtgactcaaaagacaacatcgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56663708 2052 + 60714840 GACATTCTGTCGGTGGGAGGTTGGCCAGATGGGTTTCAAGTGTGTTGTATCAGCTGTGACTTTTTGTAATGTTCTTG--------------CTACCACAATATCCACTCATCCATCCCGAATAATTGTGAGGAAACATTGTCCTTGGGATAATATTCATTTGCTAAAGACAGGGATGATACCTCAAGGTGCCACTATATACATCGAGGGGATCCACAAAAGTCCATTCAGTAAAATGTAGTCGGCATCTTAGGGTAGGTTGATTCCACCTCTAAAAAAGTAGGTACAACATCAGGTTGATTTTTCCAAAGAAAAGTGGTGATTGGCCATCTCTAGTCTCAATGTAAACGGTAATACTGATGAGTGTAGAAAAGGCAGGGAAGAGGATTGTCAATAAGTGACACTCATTGTTTTCATCTGAGCTTTGAGACTGAAAGAGGAACACGGGAGTGAGATGTCTGGGAACAAACCCCTTCTTTTTCCACGTAAACAGAGTGGAAATTGGACACTGAATTTTGGTGTACAGCAAAATCCTAAGCCCATAGTTGGGTTGAACGCGGTCATGTTGTACATCCTGGTTTCACCGCAGACATTGGAGGAAAACAGCCTGTATTCATAAGAGGCTGTCCCTCAGGTCACTGCCCAGAATATCCGGAGCTGGTGCTCACAGGGTTGGGAACTCTCCTGGACCAGACAGGCTCTGGATAT-GGGGGGCACCAAGCTCCCCGGGGCCATGCCTCCACAGCTCTCTTCTCACCTCAGTTCTTGACCATTTCCCAAACCTCTGACCTCACCTTCATTCATCCATGGTGAACACAC----TAAAGCTGGCCTTCAAAGCTTGAGACAGAGGAGAATTGGGCTTCATCTCTGGGAACTACAAGTAGGGAGTGGAGACCCAGTTCTGATCTGAGAGAAGGGAGAAGATCCTGGATCCCACTGTGGATGGGAAGAAGTA--TGTTTCTCTTTTGTGCTTGGACTCTGTGTCCAAGCATGTCTGAGATGTGATGAAGATGAATCTTCCTTTCCTCGTCCATTTTCTCATGCCAGAGAATTGGAATCTTATATTCCATTAACTCTTTTTGTTCTGTTCATCCAGACTCTACGAAGGAGAAAGGAAAAGATGTGATACTGTAATTTTGCTCCATTTGTCTAAAATGGGTAGGCTGCAACTCCTCATGAAGTGATACGTTTTCTAGCTCTTGTTGGAGGTGTCTCAGGACTCATGACTTTGGGGAACCTACAACTGTGTCAGTCTGGGGAAACTGCAAATATTCTTGTCTTACATTTGTCTCCAGCCAATTGTGATGGACTCCAGTGACCTGCAATTGCTGTTATTGCAGGTAAAATGTACCTGAGTCAGGCCACAGTTCTCCTGGACTATAAGGCCCTGGCCATGTTCCTGAGGTGATTCTGTTCATCT-AATAT-AATAATAATAACACACTAAAAATGGCAAGCCATTGTTAATTCCTGAAGTCTCATTTGAAAATTACTAAATGTCTGTTATTTTATGGTGTTTACATTATATGTAGACAGATAAACTacacacacacacacacacacacacacacacacacacacac--aGAAGAATGGATTGGTTCATGTAGAAACATAAATAATTCAAGATGAGAGGATGAAATGTCACGGCACCTACTATTCTATTTTAGATAAAGGGTCTATGAAAAGGATTGATTTCATTTTATGTTTTATTTGTTGACATTTGAACACAAACTATGTAAGTGAGGGAGTCGATTTGAAAGGGAGAAGAGCAAGTTCAAACACATTCAGGTGAGGTCATGCTTTACATGTTTTAATTGAAATGATCCATCTTGGGAGTAGATCAATAACTGAGATGGTGCCAGGAATGTTAAAAAGCTTTTGTCagtcctaaataatgacaaat-------------------------------------------------------------aaaatt--attaaactcttagaagaaaacacaagggaaaagctccacaacattggatttggcagtgatcctttagatgtgacaacaatggcacaggcaactacagaaagaattaacaagttagactttatgaaaattttgaaatattgtgactcaaaagacaacatcag i ponAbe2.chr19 I 1302 C 0 s rheMac3.chrUn_JH290802 22518 2108 + 40826 GACATTCTGTCTGTGGGAGATTGGCCAGATGGGTTTCCCGTGTGTTGTATCAGCTGTGACTTTTTTTCATGTTCTTGCCACATTTCATGTTCTACCACAATATCCGCTAGTCCATCCCAAATAATTGTGAGGAAACTCTGTCCTTGGGAAAATATTAATTTGCTACAGACAGAGATGATACCTCAAAGTCCCACTATATACATCGAGGGGATCCACAAAAGTCCATTCAGTAAAATGTAGTCGGCATCTTAAGGTAGGCTGATTCCACCTCTAAAAAAGTAGGTACAACATCGGGTTGATTTTTCCAAAGAAAAATGGTGATTGGCCATCTTTAGTCTCAATGTAAACAGTAATACTGATGAATGTGGAAGAGGCAGGGAAGAGGATTGACAGTAAGTGACACTCATTGTTTTCATCTGAGCTTTGAGACTGAAAGAGGAACACAGGAGTGAGGTGTGTGGGAACAAACCCCTTCTTTTTCCACCTAAACAGAGTGGAAATTGGACACTGAGATTTGGTGTACAGCTAAACACTAAGCCCATAGTTGGGTTAAACGCGGTCATGTTGTACATCCTGGTTTCACAGCAGACACTGGAGGAAAACAGCCGGTATTCATAAGAGGCTGTCCCTTGGGTCATTGCCCAGAATATCCGGAGTTGGTGCTCACAGCGTTGGGAACCATCCTGGACCAGACAGGCTCTGAATAT--GGGGGCACCAAACTGCCCAGGGCGACGCCTCCAT-GCACCCTTCTCACCGCAGTTCTTGACCATTTCCCAAACCTCTGACCTCACCTTCATTCTTCCACGGTGAACACAC----TAAAGTTGGCCTTCAAAGCTTGAGACAGAGGAGAATTGGGCTTCATCTCTGGTGACTACAAGTAGGGAATGGAGACTCAGTTCTGGCCTGAGAGGAGGGAGAAGACCCTGGATCCCAGTGTGGATGGGAAGAAGTATGTGTCTGTTTTTTGTGCTTGGATTCTGTGTCCAAGCATGTCTGAGATATGATAAAGATGGATCTTCCTTTCCTTGTCCATTTTCTCATGCCAGAGAATTGGAATCTTATATTCCACTAACTCCTT-TATTCTGTTCACCCAGACTCTGTGAAGGAGAAAGGAAAAGATGTGATACTCTAATTTTGCTCCATTTGTCTAAAATGGGTAGGCTGCAGCTCCTCATGAAATGATACCTTTTCTAGCTCTTATTGGAGGTGTCTCAGGACTCACTACTTCACGGGACCTGCAACTGTGTCAGTCTGGGGAAACTGCAAATATTCTTGTCTTACACTTGTCCCCAATCAATTGTGATGGACGCTGGTGACCTGCAATAGATGTCATTGCAGGTAAAATGTACCTGAGTCATGCTGCAGTTCTCCTGGACTATAAACCCCTGGCCATGTTCCTGAGGCGATTCTGTTCGTCTCAATATGAATAATAATAACACACTAAAAATGGCAAGCCATTCTTAATTCCTGAAGTCTCACTTGTAAATTAGTAAATATCTCTTATTTTATGTAGTTTACATTATATGTAGACAGATAATAA----------acacacacacacacacacac------------aGAAGAATGGATGGGTTCACCTAGAAATGTAAATAATTCAAGATGAGGAAATGAAATGTCACCGCATTTACTATTCCATTTTAGATGAAGAGTCTATGAAAAGGTTTGATTTCATTTTATGTTTTATTTGTGGACATTTTCACACAAACTATGTAAGTGAGGAAGTCGATTTGAAAGGGAGAAGAGCAAATTGAAACACATTCAGATGAGGTCATTCTTTAAATGTTTTAATTGAAATGATCCATCTTGGGATTAGAACAATAACTGAGATGGTGCCAGGAAAGTTAAAAAGCTTTTGTTAGTCCTCAATATTGACACCCAAAAGTATTAAACTCTTAGAAGAAAACACAGGGTTTTTGTTagtcctaaatattgacacctaaaatt--attaaactcttagaagaaaacacaggggaaaagcttcacaagattggatttggcagtgattctttggatgtgacaacaatggcacaggcaactacagaaaaagtacacaaattagactttataaaaattttgaaaaattgtgcctcaaaagacatcatcag i rheMac3.chrUn_JH290802 I 1331 C 0 s papAnu2.chr19 47736753 2055 + 51301725 GACATTCTGTCTGTGGGAGATTGGCCAGATGGGTTTCCAGTGTGTTGTATCAGCTGTGAC-TTTTTTCATGTTCTTGCCACATTTCATGTTCTACCACAATATCCACTAGTCCATCCCGAATAATTGTGAGGAAACTCTGTCCTTGGGAAAATATTAATTTGCTACAGACAGAGATGATACCTCAAAGTCCCACTATATACATCGAGGGGATCCACAAAAGTCCATTCAGTAAAATGTAGTCGGCGTCTTAAGGTAGGCTGATTCCACCTCTAAAAAAGTAGGTACAACATCGGGttgatttttccaaagaaaaatggTGATTGGCCATCTTTAGTCTCAATGTAAACGGTAATACTGATGAATGTGGAAAAGGCAGGGAAGAGGATTGACAGTAAGTGACACTCATTGTTTTCATCTGAGCTTTGAGACTGAAAGAGGAACACAGGAGTGAGGTGTGTGGGAACAAATCCCTTCTTTTTCCACCTAAACAGAGTGGAAATTGGACACTGAGATTTGGTGTACAGCAAAACACTAAGCCCATAGTTGGGTTAAATGCGGTCATGTTGTACATCCTGGTTTCACAGCAGACACTGGAGGAAAACAGCCGGTATTCATAAGAGGCTGTCCCTTGGGTCATTGCCCAGAATATCCGGAGTTGGTGCTCACAGCATTGGGAACCGTCCTGGACCAGACAGGCTCTGAATAT--GGGGGCACCAAACTCCCCAGGGCGACGCCTCCAT-GCACTCTTCTCACCTCAATTCTTGACCGTTTCCCAAACCTCTGACCTCACCTTCATTCTTCCATGGTGAACACGC----TAAAGCTGGCCTTCAAAGCTTGAGACAGAGGAGAATTGGGCTTCATCTCTGGTAACTACAAGTAGGGAATGGAGACTCAATTCTGGcctgagaggagggagaagaccCTGGATCCCAGTGTGGATGGGAAGaagtatgtgtttgttttttgtgcttGGATTCTGTGTCCAAGCATGTCTGAGATATGATAAAGATGAATCTTCCTTTCCTTGTCCATTTTCTCATGCCAGAGAATTGGAATCTTATATTCCACTAACTCCTT-TATTCTGTTCACCCAGACTctgtga---agaaaggaaaagatgtgATACTCTAATTTTGCTCCATTTGTCTAAAATGGGTAGGCTGCAGCTCCTCATGAAATGATACCTTTTCTAGCTCTTATTGGAGGTGTCTCAGGACTCACTACTTCACGGGACCTGCAACTGTGTCAGTCTGGGGAAACTGCAAATATTCTTGTCTTACACTTGTCTCCAATCAATTGTGATGGACGCTGGTGACCTGCAATAGATGTCATGGCAGGTAAAATGTACCTGAGTCATGCTGCAGTTCTCCTGGACTATAAACCCCTGGCCATGTTCCTGAGGCGATTCTGTTCGTCtcaatatgaataataataacactCTAAAAATGGCAAACCATTCTTAATTCCTGAAGTCTCACTTGTAAATTAGTAAATATCTCTTATTTTATGGAGTTTACATTATATGTAGACagataataa----------acacacacacacacacacacacacacacacatagaagaaTGGATGGGTTCACCTAGAAACgtaaataattcaagatgaggaaatgaaatgtCACCGCATCTACTATTCCATTTTAGATGAAGAGTCTATGAAAAGgtttgatttcattttatgttttatttgtggACATTTTCACACAAACTATGTAAGTGAGGAAGTCGATTTGAAAGGGAGAAGAGCAAATTGAAACACATTCAGGTGAGgtcattctttaaatgttttaattgaaaTGATCCATCTTGGGATTAGAACAATAACTGAGATGGTGCCAGGAAAGTTAAAAAGATTTTGTTAGTCCTCAATATTGACACCC-------------------------------------------------------------AAAAGT--attaaactcttagaagaaaacacaggggaaaagctTCACAAGGTTGGATTTGGCAGTGATTCTTTGGATGTGACAACAATGGCGCAGGCAACTAcagaaaaagtacacaaattagactttataaaaattttgaaaaattgtgcCTCAAAAGACatcatcag i papAnu2.chr19 I 1325 I 4374 s chlSab2.chr6 47416151 2025 + 50890351 GACATTCTGTCTGTGGGAGATTGGCCAGATGGGTTTCCAGTGTGTTGTATCAGCTGTGACTTTTTTTCATGTCCTTG--------------CTACCACAATATCCACTAGTCCATCCCGAATAATTGTGAGGAAACTCTGTCCTTGGGAAAATATTAATTTGCTAAAGACAGAGATGATACCTCAAAGTCCCACTATATACATCAAGGGGATCTACAAAAGTCCATTCAGTAAAATGTAGTCGGCATTTTAAGGTAGGTTGATTTCACCTCTAAAAAAGTAGGTACAACATCGGGTTGATTCTTCCAAAGAAAAACGGTGATTGGCCATCTTTAATCTCAATGTAAACGGTAATACTGATGAATGTGGAAAAGGCAGGGAAGAGGATTGACAGTAAGTGACACTCATTGTTTTCATCTGAGCTTTGAGACTGAAAGAGGAACACAGGAGTGAGGTGTGTGGGAACAAATCCCTTCTTTTTCCACCTAAACAGAGTGGAAATTGGACACTGAGGTTTGGTGTGTAGCAAAACCCTAAGCCCATAGTTGGGTTAAACACGGTCATGTTGTACATCCTGGTTTCACAGCTGACACTGGAGGAAAACAGCCGGTATTCATAAGAGGCTGTCCCTTGGGTCATTGCCCAGAATATCCGGAGTTGGTGCTCACAGCGTTGGGAACTGTCCTGGACCAGACAGGCTCTGAATAT--GGGGGCACCAAACTCCCCAGGGCGACGCCTCCAT-GCACTCTTCTCACCTCAATTCTTGACCGTTTCCCAAACCTCTGACCTCACCTTCATTCTTCCATGGTGAACACACTAAATAAAGCTGGCCTTCAAAGCTTGAGACAGAGGAGAATTGGGCTTCATCTCTGGTAACTACAAGTAGGGAATGGAGACTCAGTTCTGGCCTGAGAGGAGGGAGAAGACCCTGGATCCCAGTGTGGATGGGAAGAAGTATGTGTTTGTTTTTTGTGCTTGGATTCTGTGTCCAAGCATGTCTGAGATATGATAAAGATGAATCTTCCTTTCCTTGTCCATTTTCTCATGCCAGAGAATTGGAATCTTATATTCCACTAACTCCTT-TATTCTGTTCACCTAGACTCTGTGAAGGAGAAAGGAAAAGATATGATACTCTAATTTTGCTCCATTTGTCTAAAATGGGTAGGCTGCAGCTCCTCATGAAAAGATACCTTTTCTAGCTCTTATTGGAGGTGTCTCAGGACTCACTACTTCACGGGACCTGCAACTGTGTCAGTCTGGGGAAACTGCAAATATTCTTGTCTTACACTTGTCCCCAGTCAATTGTGATGGACGCTGGTGACCTGCAATAGATGTCATTGCAGGTAAAATGTACCTGAGTCATGCTGCAGTTCTCCTGGACTATAAACCCTTGGCCATGTTCCTGAGGCGATTCTGTTCGTCTCAATACGAATAATAATAACACACTAAAAATGGCAAGCCATTCTTAATTCCTGGAGTCTCACTTGTAAATTAGTAAATATCTCTTATTTTATGGAGTTTACATTATATGTAGACAGATAATAA----------acacacatacacacacacacacacacacac--aGAAGAATGGATGGGTTCACCTAGAAACGTAAATAATTCAAGATGAGGAAATGAAATGTCACTGCATCTACTATTCCATTTTAGATGAAGAGTCTATGAAAAGGTTTGATTT----------------------CATTTTCACACAAACTATGTAAGTGAGGGAGTCGATTTGAAAGGGAGAAGAGCAAGTTCAAACACATTCAGGTGAGGTCATTCTTTAAACGTTTTAATTGAAATGATCCGTCTTGAGATTAGAACAATAACTGAGCTGGTGCCAGGAAAGTTAAAAAGTTTTTGCTagtcctaaatattgacacct-------------------------------------------------------------aaaatt--attaaactcttagaagaaaacacaggggaaaagcttcacaagactggatttggcagtgattctttggatgtgacaacaatggcacaggcaactacagaaaaattacacaaattagactttatgaaaattttgaaaaattgtgcctcaaaagacatcatcaG i chlSab2.chr6 I 1318 C 0 e canFam3.chr1 102735914 0 + 122678785 I e calJac3.chr22 45864046 94120 + 49145316 T a score=2398272.000000 s hg38.chr19_GL949747v2_alt 416759 2989 + 729520 ttacttcacatggcaagg---aaaaagaacttttaagacgatattatcaaagtaaaaagacaacccacagaatgggagaaaatgttttcaaaccacaccacctgtaagggattaacatccagaatatacagacaactcctaaaactcaatcacaataaactcaattcaaaaatgggcaaagtactgaaacagacatttctccaaagaacatacgcatgaaaagatattcagcatcacgaatcattagggaaatactaactaaaactacaccagatgccatttcataccccttaggatgggtatcatcaaa----acaacaacaacaacaacaacaaagtttctatacattaacaacaaactatccaaaaaagtttacaagaaaataagcccatttgcaataactacagaaaacaaaacatgcaggaataaattcacccaaggagtagaaagatctgtatgc-aaaagctataaaacattgatgaaaaaactcaagaaataaacaaataaatcgaaagatattccatgttcacggatcagaaggattaatgttgttaaaatgtccattctatccaaagtgattcaatgcaaccattatcaaaaatccaatga-cattttttttacagaaatagaaaaaacagtcctaaaattcatgtggaaccacaaaagatctcaaataaccaaagccatctagagggaaaggaacaaagttggaagcatcacattacctaaac---------acaaactacattacaaaattacagtaattaaaacaacacagtacttgcataaaaacagacacatagaccaatggaagtgattcatagcccagg-aaaaaaatgcatgcatttagggtcaaacaatttttgggatg-tgtcaagaacacacaatggagaaggaacagtctctttaataaatgggattgggagactgcatgtccacatgcagaagaatggaagtggacatttgcctcacaaaacatacaaagtcaactcaagatagattaatgacttaaatgtaagatgaaagactataatcccagcaatttgggaggccaaggtgggcagatcacctaaggtcaggattccaagaccagcatggccaacatggtgaaatcccgcctctactaaaaatac-aaaaacagctgggtgtggttgtgggtgcctgtaatctcagctactcgggaggttgagacaggagaatcacttgaacccaggaggtagaggttgcagtgagccgagatcgcaccactgcactccagccggggcaacacagtgagactccatcttaaaaaa---------aaaaaaaaaactactaaaagaaatcaagggaaaactccactggcttgggcaaaaccattttggatattaacccaaaggcccaggcaacaaaagcaaaagtagacaaataacattatatcaaattgaaagtttctgcaaag----aaaaaaaaaactcaacaagtggaaagacaacctatggaatg--------ggagaatatatttgcacccatacatctaataaggaattaatatccaaaatatataagaaactcaaacaactcaatggtaagaaatcaaataacccaacttaaaaaaatgggcaaagtatctgaataaacatttctaagaataagacaaatcaccaaaaggtatatgaaaaaatgattagcattactaaacatcagctaaataaaaattaaaactagaatgagatatcacctcacacctcttagaatgaccattaacagtctgggcatggtggctcatgcctgtaattcaggcactttgggaggccgaggcagggagattacctgaggtcagcagttcgaaaccagcctggccaatatggtgaaaccccatccctactaaaaatacaaaaattagcagagtttggtggcgcacacttgtagtcccagctactctggagactgaggcaggggaatcgcttgaacccaggaggcagaggttgcagtacaccgagattgtgccactgcactccagcctgggtgacagagcaagactgagtctcaaaaaaaaaaaaaa-aaaaagaccattatcaaaaacataaaaaataacaagggttaacgaggatgtggagaaaagggaacatttgtatgcagttgatgggaatgtaaattagcacaaccattatggaaaacagtctggaagttcctgaaaaaattaaacatagaattcccatatgtgtctgcaatccaactactgcgcatgtatccaaaggaagtggaatcagtatgttgaagagatatctgcattcccatgtttacagccgcattattcataacagccaagatgtggaatcacccttactgcccatctatgggtgcatggacaaagaaaacgtggtatacgataggaacgtaatgaagtactatacaacctttacaacaaagaaggaagtcctctcatttgtgacaatgtgaaaaaacttagaggacattatgttaagggaaacaatccaggcacagaaagacaaatgccacatgatctcatgtgtggagtgtaagaagtggaacctagaggaacagtaaaatggtcgtcgaaagaacct-gggatggagagagattgaagagatgttggtcaaaggatgcaaaatttcagttagaagaaatcggttcaagagatctattgtatgtcttggtgactccagttaatagcaacatatggtgtattgaacattactaagagattagattttacatgttctcaccacacacacaaaacatac---aagtatgtgaaaaaataaatatgataaagaggttgtttcatccattccacaatgtgtacctatatgaaaacatcatgatggacaccacaaataCCCTTTTCCTCATTAATTAAAtttg------ttttggtttttt-ttttgagatgcagtttcactgttgttgcccaagctgaggtgcaatggcgtgatctccgctcactgcaacctctgcctcccaggttcaagcggttctcctgactcagcctcccaagcagctgggactacagttgcgtaccacc s panTro4.chr19 59749494 2973 + 63644993 ttacttcacatgccaagg---aaaaagaacttttaagacgatattatcaaagtaaaaagacaacccacagaatgggagaaaatgttttcaaaccataccacctgtaagggattaacatccagaatatacagacaacacctaaaactcagtcacaataaactcaattcaaaaatgggcaaagtacttaaacagacatttctccaaagaacatacacatgaaaagatattcagcatcacgaatcattagggaaatactaactaaaactacaccagatgccatttcataccccttaggatggggatcatcaa-------aacaacaacaacaacaacaaAGtttctatacattaacaacaaactatccaaaaaagttcacaagaaaataagcccatttacaataactacagaaaacaaaacatgcaggaataaattcacccaaggagtagaaagatctgtacac-aaaagctataaaacattgatgaaaaaactcaagaaaaaaacaaataaatcgaaagatattccatgttcacggatcagaaggattaatgttgttaaaatgtccattctatccaaagtgattcaatgcaaccattatcaaaaatccaatga-c-ttttttttacagaaatagaaaaaacagtcctaaaattcatgtggaaccacaaaagatctcaaataaccaaagccatctagagggaaaggaacaaagttggaagcatcacattacctaaac---------acaaactacattacaaagttacagtaattaaaacaacacagtacttgcataaaaacagacacatagaccaatggaagtgatttgtagcccagg-aaaaaaatgcatgcatttagggtcaaacaatttttgggatg-tgtcaagaacacacaatggagaaggaacagtctctttaataaatgggattgggagactacatgtccacatgcagaagaatggaagtggacatttgtctcacaaaacatacaaagtcaactcaagatagattcatgacttaaatgtaagatgaaagactataatcccagcaattagggaggccaaggcgggaggatcacctaaggtcaggattccaagaccagcatggccaacatggtgaaatcccgcgtctactaaaaatac-aaaaacagctgggtgtggtggtgggcgcctgtaatctcagctactcgggaggttgagacaggagaatcacttgaacccaggaggtagaggttgcagtgagccgagatcgcaccactgcactccagcctgggcaaca----gagactccatctt-aaaaa---------aaaaaaaaaactactaaaagaaatcaagggaaaactccactggcttgggcaaaaccattttggatattaacccaaaggcccaggcaacaaaagcaaaagtagacaaatgacattatatcaaattgaaagtttctgcaaag-----aaaaaaaaactcaacaagtggaaagacaacctatggaatg--------ggagaatatatttgcacccatacatctaataaggaattaatatccaaaatatataagaaactcaaacaactcaatggtaagaaatcaaataacccaacttaaaaaaatgggcaaagtatctgaatagacatttctaagaataagacaaatcaccaaaaggtatatgaaaaaatgattagcattactaaacatcagctaaataaaaattaaaactagaatgagatatcacctcacacctcttagaatgaccattaacagtctgggcatggtggctcatgcctgtaattcaggcactttgggaggccgaggcagggagattacctgaggtcagcagttcgaaaccagcctggccaatatggtgaaaccccatccctactaaaaatacaaaaattagcagagtttgatggcgtgcacttgtagtcccagctactctggagactgaggcaggggaatcgcttgaacccaggaggcagaagttgcaggacaccgagattgtgccactgcactccagcctgggtgacagagcaagactgagtctcaaaaaaaaaaaaaa-------accattatcaaaaacataaaaaataacaagggttaatgaggatgtggagaaaagggaacatttgtatgcagttgatgggaatgtaaattagtacaaccattatggaaaacagtctggaagttcctgaaaaaattaaacatagaattcccatatgtgtctgcaatccaactactgcacatatatccaaaggaagtggaatcagtatgttgaagagatatctgcattcctatgtttacagtcacattattcataacagccaagatgtggaatcacccttactgcccatctatgggtacatggacaaagaaaacgtggtatacaataggaacgtaacgaagtattatacaacctttacaacaaagaaggaagtcctgtcatttgtgacaatgtgaaaaaacttagagaacattatgttaagggaaacaatccaggcacagaaagacaaatgccacatgatctcatgtgtggagtgtaagaagtggaacctagaggaacagtaaaatggtcgtcgaaagaacct-gggaaggagagggattgaagagatgttggtcaaaggatgcaaaatttcagttagaagaaatcggttcaagagatctattgtatgtcttggtgactccagttaatagcaacatatggtgtattgaacattactaagagattagattttaagtgttctcaccacacacaaaaaacatac---aagtatgtgaaaaaataaatatgataaagaggttgtttcatccattccacaatgtgtacctatatgaaaacatcatgatggacaccacaaataCCCTTTTCCTCATTAATTAAAtttg------ttttggtttttt-ttttgagacgcagttttgctgttgttgcccaagctgtggtgcaatggcgtgatctccgctcactgcaacctctgcctcccaggttcaagcggttctcctgactcagcctcccaagcagctgggactacagttgcgtaccacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56665760 3015 + 60714840 ttacttcacatgccaagg---aaaaacaacttttaagacattattatcaaagtaaaaagacaacccacagaatgggagaaaatattttcaaatcatatcacctgtaaaggatcaatatccagaatatacagacaactcctaaaactcagccacaataaactcaattcaaaaatgggcaaagaacttaaatagacatttctccaaagaacatacacatgaaaagatattcagcatcacaaatcattagggaaatacaaaccaaagctataccagatgccacttcataccccttaggatgggtatcatccaa------aacaacaacaacaacaacagagtttctatacactaacaaaaaattatccaaaaaattttacaagaaaataagcccatttacaataactacagaaaacaaaacatgcaggaataaattcatccaaggagtagaaagatgtgtacac-aaaagctataaaacattgatg-aaaaactcaagaaaaaaacaaataaatcaaaagatattccatgttcatggatcagaaggattaatatttttcaaatgtccattctatccaaagtgattcaatgcaaccattatcaaaaatccaatga-c-tttttttcacagaaatagaaaaaacagtcctaaaattcacgtggaactacaaaagacctcaaataaccaaagcaacctagagggaaaggaacaaagttggaagcatcacattacctaaactactactaaacaaactagattacaaagttacagtaattaaaacaacacagtacttgcataaaaacagacacatagaccaatggaagtgattcatagcccagg-aaaaaaatgcatgcatttagggtcaaacagtttttgggatgttgtcaagaacacacaatggagaagcaacagtctctttaataaatggggttgggagactgcacgtccacatgcagaagaatggaagtggacatttgtctcacagaacatacaaagtcaactcaagatagattaatgacttaaatgtaagatgaaagactataatcccagcaatttgggaggccaaggcaggcggatcacctaaggtcaggattccaagacaagcacggccaatatggtgaaatcccatctctactaaaaatacaaaaaacatctaggtgtggttgtgggtgactgtaatctcagctactcaggaggctgagacaggagaatcacttgaacccaggaggtagaggttgcagtgagccgagatcgcaccactgcactccagcctgggcaacagagtgagactccatcttaaaaaacaaacaaacaaacaaaaaactactaaaagaaatcaagggaaaactccactgacttgggcaaaagctttttggatattatcccaaaggcccaggcaacaaaagcaaaagtagacaaataacattatatcaaattgaaagtttctgcaaag-----aaaaaaaaattcaacaaatggaaagacaacctatggaatgggaggataggagaatatatttgcacccatacatctaataaggaattaatatccaaaatatataagaaactcaagcaactcaatggtaagaaatcaaataacccaattttaaaaa--gggcaaagtatctgaataggcatttctaagaataagacaaatcaccaaaaggtatatgaaaaaatgatgagcattaataaacatcagctaaataaaaattaaaactagaatgagatatcacctcacacctcttagaatgaccattaatagtctgggcacagtggctcatgcctgtaattcaggcactttgggaggccgaagcagggagattacctgaggtcagcagttctaaaccagactggccaatatggcaaaaccccatctctactaaaaatacaaaaattagcagggtttggtggcttgcacctgtagtcccagctactctggagactgaggcaggggaatcacttgaacccaggaggcagaggttgcagtgggccgagattgtgccactgcactccagcctgggtgacagagcaagactgagtctcaaaaaaaaaaaaaaaaaaaagaccgttatcaaaaacataaaaaataacaagggttaatgaggatgtggagaaaagggaacatctgtatgcagttgatgggaatgtaaattagtacaaccattatggaaaacagcctggaagttcctg-aaaaattaaacatagaattcacatatgt-tctgcaatcccactactgtgcatgtatccaaaggaagtggaatcagtatgttgaagagatatctgcattaccatgtttacagcggcattattcataacagccaagctgtggaatcaaccttactgcccatctatgggtgcatggacaaagaaaataaggtatacaacaggaacgtaatgaagtactatacaaccttttcaacaaagaaggaagccatgtcatttgtgacaatgtgaataaacttagaggacattatgttaagggtaacaatccaggcacagaaagacaaatgccacatgatctcatatgtggagtgtaagaagtggaacccagagaaacagtaaaatggtcgttgaaagaacctaggggaggagagggattgaagagatgttggttaaaggatgcgaaatttcagttagaagaaattggttcaagaaatctattgtatgtcttggtgactccagttaataacaacatatggtgtattgaacattactaagagattagattttaagtgttctcaccacacacacaaaacatac---aagtatgtgaaaaaataaatatgataaagaggttgtttcatcctttccacaatgtgtacctatatgaaaacatcatgatgtacaacacaaataCCC-TTTCCTCATTAATTACATTTGGGtttttttttttttttt-ttttgagacacagttttgctgttgttgcccaagctgaggtgcaatggcgtgatctccattcactgcaacctccgcctcccaggttcaagcggttctcctgactcagccttccaagtaactgggactacagttgtgtgccacc i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 24626 2958 + 40826 ttacttcatatgccaagggggaaaaaaaaagtttaagacaatattatcaaagtaaaaagacaacccacagaatgggagaaaatgttttcaaatcatatcacctgtaagggattaacatccacaatatacacagaactcctaaaactcgaccacaataaactcaattcaaaaatgggcaaagaacttacacagacatttctccaaagaatatacacatgaaaagatactcaacatcatgaatcattaggaaaatacaaaccaaagctacaccagatgccacttcataccccttaggatgggtatcatcaaa---------------aacaacaacagagtttccacacactaacaacaaactatccaaaacattttccaagaaaataagcccatttacaataattacagaaaacaaaacatgcaggaataaattcatccacagagtacaaagatctgtatataaaaaattataaaacattgatgaaaaaactcaagaaa-aaacaaataaatcaaaagatattccatgttcacagattagaagaattaatgctgttaaaatgtccattctatccaaagtgattcaatgcaaccattatcaaaaatccaatga-c-ttttttttacagaagtagaaaaaacaatcctaaaattcatgtggaaccaaaaaagacctcaaataaccaaagccatctagagggaaaggaacaaagttggaagcatcacattacctaaac---------acaaactacaatacaaagttacagtaattaaaacaacatagtacttgcataaaaacagacacatagaccaatggaagtgattcatagcacaggaaaaaaaatgcatgcatttagggtcaaacaattttggggatgttgtcaagaatacacaatggagaaggaacagcctctttaataaatagggttaggagacttcgtgtccacatgaagaagaatggaagcggatacttatctcacaaaacatacaaagtcaactcaagatagattaatgacttaaatgtaagatgaaagaccataatcccagcaatttggaaggccaaggtgggcggatcacctaaggtcaggattccaagaccagcccagccaacatggtgaaatcccgtctctactaaaaatacaaaaagtagctgggtgtggttgtgggtgcctgtaatctcagcagctcaggaggctgagacaggagaatcacttgaaccaaggaggtagaggttacagtgagccgagatcacaccactacactccagcctgggcaacagagtaagattccatct----aaa---------aaacaaaaaactactaaaagaaatcaagggaaaactccactagcttgcacaaaacctatttggatattatcccaaaggcccaggcaacacaagcaaaagtagacaaatgaaattatatcaaattgaaagtttctgcaaagaaaaaaaaaaaaaactcaacaagtgaaaagacaacctatggaatg--------tgagaatatatttgcacgcatacatctaataaggaattaatatccaaaatatataagaaactcaaacaactcaatgataagaaatcaaataatccaatt--aaaaaataggcaaagtatctgaatagacatttctaagaataagacaaatcaccaaaagctatacaaaaaaatgattag----------caccagctaaataaaaattaaaactagaatgagatatcacctcacacctcttagaatgaccattaatggtctgggcacggtggctcatgcctgtaattcaggcactttgggaggccgaggcagggagattacctgaggtcagcagttcgaaaccagcctggccaatgtggcgaaatctcatctctactaaaaaaacaaaagttagcagggtttggtggtgcacacctgtagtcacagctactctggagactgaggcaggggaatccctagaacccaggaggcaaaggttgcagtgggccgaggttctgccactgcactccagcctgggtgacagagtaagactgtgtcaaaaaaaaaaaaaaag-------tccattatcagacacataaaaaataacaagggttaatgaggatgtggagaaaagggaacatttgtatgcagttgatgggaatgtaaattagtacaaccattatggaaaacagtctggaagttcctgaaaaaattaaacatagaattccc--atgtttctgcaatcccactaccgtccatgtatccaaaggaagtggaatcagtccattgaagagatagctgcattcccatgtttacagcggcattattcataacagtcaagatgtggaatcaactttaatgcccatctgtgggggcatggacaaagaaaatgtggtatacaataagaatgtaatgaagtactatacaacctttacaacaaagaaggaagtcctgtcatttgtgacaatgtcaataaacttagaggacattatgtcaagggaaacaatccacacacagaaagacaaatgccccaagatctcatatgtggagtgcaagaagtggaacccagagaaacagtaaaatggttgcctc---ctcct-ggggaggagagggattgaagagttgttggtcaaaggatgcaaaatttcagtttgaagaaatcgggtcaagagatctattgtacgtcttgtggactccagttaatcacaacatgtggtgtattgaacattactaagagattagattttaagtgttctcaccacacacacaaaacatacaacaagtatgtgagaaaataaatatgataaagaggttatttcatccattccacaacgtgtacttatataaaaacatcacaaggtacaccacaaataCCTTTCTCCTCATAGATTAAAtttt------------ttttttattttgagatggagtttcgctcttgtcgcccaagctggagtgcagtggtgcaatctcagctcactgcaacctcctcctcccaggttcgagcggttctcctgactcaacctcccaagtagctgggactacaggtgcgtgccacc i rheMac3.chrUn_JH290802 C 0 I 894 s chlSab2.chr6 47418176 2958 + 50890351 TTACTTCATATGCCAAGGGAAAAAAAAAACATTTaagacaatattatcaaagtaaaaagacaacccacagaatgggagaaaatgttttcaaatcatatcacctgtaagggattaacacccacaatatacacagaactcctaaaacttgaccacaataaactcaattcaaaaatgggcaaagaacttaaatagacatttctccaaagaatatacacatgaaaagatactcgacatcatgaatcattaggaaaacacaaaccaaagttacaccagatgccacttcataccccttaggatgggtatcatcaaaaacaacaacaacaacaacaacaacagagtttccacacactaacaacaaactatccaaaaaatttcccaagaaaataagcccatttacaataattacagaaaacaaaacatgcaggaataaattcatccacagagtacaaagatctgtatataaaaaattataaaacattgatgaaaaaactcaagaaa-aaacaaataaatcgaaagatattccatgttcacagattggaagaattaatgctgttaaaatgtccattctatccaaagtgattcaatgcaaccattatcaaaaatccaatgacc-ttttttttacagaagtagaaaaaacaatcctaaaattcatgtggaaccaaaaaaaccctcaaataaccaaagccatctagagggaaaggaacaaagttggaagcatcacattacctaaac---------acaaactacaatacaaagttacagtaattaaaacaacatagtacttgcataaaaacagacacatagaccaatggaagtgattcatagcacaggaaaaaaaatgcatgcatttagggtcaaacaattttggggatgttgtcaagaatacacaatggcgaaggaacagcctctttaataaatagggttaggagacttcgtgtccacatgaagaagaatggaagcagatacttttctcacaaaacatacaaagtcaactcaacatagattaatgacttaaatgtaagatgaaagaccataatcccagcaatttgggaggccaaggtgggtggatcacctaaggtcaggattccaagaccagcccagccaacatggtgaaatcccgtctctactaaaaatacaaaaagtagctgggtgtggttgtgggtgcctgtaatctcagcaactcaggaggctgagacacgagaatcacttgaaccaaggagttagaggtttcagtgagccgagatcacaccactgcactccagcctgggcaacagagtaagattccatct----aaa---------aaacaaaaaactactaaaagaaatcaagagaaaactccactagcttggacaaaacctatttggatattatcccaaaggcccaggcaacacaagcaaaagtagacaaatgaaattatatcaaattgaaagtttctgcaaaggaaaaaaaaaaaaactcaacaagtgaaaagacaacctatggaatg--------tgagaatatatttgcatgcatacgtctaataaggaattaatatccaaaatatataagaaactcaaacaactcaatgataagaaatcaaataacccaatt--aaaaaataggcaaagtatctgaatagacatttctaagaataagacaaatcaccaaaagctatacaaaaaaatgattag----------catcagctaaataaaaattaaaactagaatgagatatcacctcacacctcttagaatgaccattaatggtctgggcacagtggctcatgcctgtaattcaggcactttgggaggccgaggcagggagattacctgaggtcagcagttcgaaaccagcctggccaatatgacgaaatcccatctctactaaaaatacaaaagttagcagggtttggtggtgcacacctgtagtcacagctactctggagactgaggcaggggaatccctagaacccaggaggcaaaagttgcagtgggccaagattctgccactgcactccagcctgggtgacagagtaagactgtgtc--aaaaaaaaaaaaag-------tccgatatcagaaacataaaaaataacaagggttaatgaggatgtggagaaaagagaacatttgtatgcagttgatgggaatgtaaattagtacaaccattatggaaaacagtctggaagttcctgaaaaaattaaacatagaattccc--atgtttctgcaatcccactaccatccatgtatccaaaggaagtgggatcagtatattgaagagatatctgcattcccatgtttacagcggcattattcataacagtcaagatgtgggatcaaccttaatgtccatctatgggggcatggacaaagaaaatgtggcatacaataagagtgtaatgaagtactatacaacctttacaacaaagaaggaagtcctgccatttgtgacaatgtgaataaacttagaggacattatgtcaagggaaacaaaccacacacagaaagacaaacgtcccaagatctcatatgtggagggcaagaagtggaacccagagaaacagtaaaatggtcgtc-----------------gaaagaacctggggaggagttggtcaaaggatgcaaaatttcagttagaagaaatcgggtcaagagatctattgtatgtcttgaggactccagttaatcacaacatgtggtgtattgaacattactaagagattagattttaagtgttctcaccacacacacaaaacatacaataagtatgtgaaaaaataaatatgataaagaggttgtttcatccgttccacaatgtgtacctatataaaaacatcacgatgtacaccacaaataCCTTTCTCCTCACAGATCAAAAttt------------tttttt-ttttgagatggagtttcactcttatcgcccaagctggagtgcagtggtgcaatctcagctcactgcaatctcctccttccaggttcgagcggttctcctgactcaacctcccaagtagctgggactacaggtgcatgccacc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102735914 0 + 122678785 I e calJac3.chr22 45864046 94120 + 49145316 T e papAnu2.chr19 47738808 4374 + 51301725 I a score=50401.000000 s hg38.chr19_GL949747v2_alt 419748 112 + 729520 ccgtccggct-atatttgtgtttctagtagagacagggtttcgccatgttggccaggctggtctcgaactccagacctcaggtgatccacccgcttcgccctcccaaagtgct s panTro4.chr19 59752467 112 + 63644993 ccgtccggct-atatttgtgtttctagtagagacagggtttcgccatgttggccaggctggtcttgaactccagacctcaggtgatccacccgcttcgccctcccaaagtgct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56668775 112 + 60714840 ccgtctggct-atatttgtgtttctagtaaagacagggtttcgccatgttggccaggctggtctcgaactcctcacctcaggtgatccacccgcttcgccctcccaaagtgct i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47421134 113 + 50890351 atgccaagctaattttggtatttttattagagatggggtttctccatgttagccaggctggtctcgaactcctgatctcaggtgctccaacctcttcagcctcccaaagtgct i chlSab2.chr6 C 0 I 1003 e canFam3.chr1 102735914 0 + 122678785 I e calJac3.chr22 45864046 94120 + 49145316 T e papAnu2.chr19 47738808 4374 + 51301725 I e rheMac3.chrUn_JH290802 27584 894 + 40826 I a score=-31.000000 s hg38.chr19_GL949747v2_alt 419860 1 + 729520 -a s panTro4.chr19 59752579 1 + 63644993 -a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56668887 2 + 60714840 gg i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102735914 0 + 122678785 I e calJac3.chr22 45864046 94120 + 49145316 T e chlSab2.chr6 47421247 1003 + 50890351 I e papAnu2.chr19 47738808 4374 + 51301725 I e rheMac3.chrUn_JH290802 27584 894 + 40826 I a score=6734.000000 s hg38.chr19_GL949747v2_alt 419861 26 + 729520 gatttcaggctgagacaccacaccca s panTro4.chr19 59752580 26 + 63644993 gatttcaggctgagacaccacgctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56668889 26 + 60714840 gatttcaggctgagacaccatgccca i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47743182 21 + 51301725 gattacaggcgtgaggacCAG----- i papAnu2.chr19 I 4374 C 0 e canFam3.chr1 102735914 0 + 122678785 I e calJac3.chr22 45864046 94120 + 49145316 T e chlSab2.chr6 47421247 1003 + 50890351 I e rheMac3.chrUn_JH290802 27584 894 + 40826 I a score=2179092.000000 s hg38.chr19_GL949747v2_alt 419887 1844 + 729520 gcctgtacattgactttctgcccttaaactgtgctgaagtttgtttctcagatgtaggagcctttgggcagagactatggggtttctaggtatagaaattatctcatcttcaaacagaggtaatttgactacctctctctgctactctcttcttacttggatgccttataattctttctctttcctgatggctctgtctaggacttcaagtactatgttgaataggatggtgagagtgggcattcttgtcttg-tttcacttatgaa-gggaacttcttccagcttttactcattcagtatgatgtt-ggttgtgggtttgtcaca-ggcggctcttattatattgagttatgtttcttcaatgcttagcttgttgagggcttttaacatgaagaaatgcttagtaaaaagtatgttctacatgtgtgttgagaagatcatgtggtttttgtttttagttttgtttaggtgatgaatcacatgtattga-ttgtgtatgttcaaccaaccttgcaccctaagaataaagttgacttgatcatggtggattcactttttgata----------tgctgcgggattcagttc-ttagtattttttgtggatttttgcctctatgttcatcaggaatattggcatgtagttttcttttgtttaatgttcttttctgtctttagtatcagggtgatgccagccttatagaatgagtaaaggCCACCCTGGGC-AAACAGTGAGACCCATCCCTTTTTAAAAATTATGAGTTTTACAAATTTAAAATGCATAGTGAAAAAGTTCTTACAAACTCCAGAAAGGTAGGTGTAAATAAGAGACATTTGTAAGAATGACAGCACATTAAATGTGTAGATTTCAACCTTCAGTTATTGCAATATTCCAGTATCAAGTTGGAGGATGTTATC----------------------------------------------------------------------------------------------AGTCTGATATTTTTTCCTCAAATGAGAGAGAGAAAGAAAGACACACAAACAACACAGGGAGAAAAAAAGCAC-ACGTTACAGAGAGACAAAAAGGGAGACAGGGAACTGTGAATTTGGACTCTTGTGTCATAAGACAAATTCTAGATAACACGACCAGACCTTCAATTGACATATTGTGTTTTTGCTAATAAGGTGGAATTCTATGATGCGAAATAACTATATAGTCTTTTCTACTGGGATTTAAATCATTTTATCTGTTTCTGGCTTAACAGGAAAAATACAACCATGGAAAATTATGATGATTTATTTAATACGATTGCTCTATAGTGTTAATAAAACCTATTAGGTATTTTGCATATTACATATCAAGGAGAGTTTGAATCTCAGGTAGAAACA---------AAAAAAAATACATCAAAAGTTCCTCATGTGAGTGCAGAATTCAATCGTCCCGTGCAGGGGTAAGTGAGTCTGAGATGTGTTTTGAGCCTGGCCGTTGCGCATGATGTGAAGTGACAAGTCTAGTCTGCAGTTTTCAGAAACCCTCATTCCTCCCTTGACTG-ATTCACCACTTGAACCTCATATGACGTAGAAGAAGCCTACCTATGTCCCCTTCACATGTTGTGGTCAATGTGTCAACTGCACGATCCGGGCCCCTCACCACATCCTCTGCACCGGTCAGTCGAGCCGAGTCACTGCGTCCTGGCAGCAGAAGCTGCACCATGTCCATGTCACCCACGGTCATCATCCTGGCATGTCTTGGTGAGTCCTGGAAGGGAAGGAGCACCAGGGTTACACTATGGGCCTGCAGATTGGGTGTCTCCCCAGCAGAGAGCCATGTTCTGAAGCAAGTGAGTGGTGAGGATGAGTTAATTTTCAGTCCAGCGTGGCGCCCAGTGGCTCAGGAGGAAAGGGTAGGTTGCTGCCGAGATGAATAGTTCCTCAT s panTro4.chr19 59752606 1845 + 63644993 gcctgtacattgactttctgcccttaaactgtgctgaagtttgtttctcagatgtaggagcctttgggcagagactatggggtttctaggtatagaaattatctcatcttcaaacagaggtaatttgactacctctctctgctactctcttcttacttggatgccttataattctttctctttcctgattgctctgtctaggacttcaagtactatgttgaataggatggtgagagtgggcattcttgtcttg-tttcacttatgaa-gggaacttcttccagcttttactcattcagtatgatgtt-ggttgtgggtttgtcata-ggcggctcttattatatcgagttatgtttcttcaatgcttagcttgttgagggcttttaacatgaagaaatgcttagtaaaaagcatgttctacatgtgtgttgagaagatcatgtggtttttgtttttagttttgtttaggtgatgaatcacatatattgatttgtgtatgttcaaccaacattgcaccctaagaataaagtcgacttgatcatggtggattcactttttgata----------tgctgcgggattcagttc-ttagtattttttgtggatttttgcatctatgttcatcaggaatattggcatgtagttttcttttgtttaatgttcttttctgtctttggtatcagggtgatgccagcctcatagaatgagtAAATGCCACCCTGGGC-AAACAGTGAGACCCATCCCTTTTTAAAAATTATGAGTTTTACAAATTTAAAATGCATAGTGAAAAAGTTCTTACAAACTCCAGAAAGGTAGGTGTAAATAAGAGACATTTGTAAGAATGACAGCACATTAAATGTGTAGATTTCAACCTTCAGTTATTGCAATATTCCAGTATCAAGTTGGAGGATGTTATC----------------------------------------------------------------------------------------------AGTCTGATATTTTTTCCTCAAATGAGAGAGAGAAAGAAAGACACACGAACAACACAGGGAGAAAAAAAGCAC-ACGTTACAGAGAGACAAAAAGGGAGACAGGGAACTGTGAATTTGGACTCTTGTGTCATAAGACAAATTCTAGATAACACGACCAGACCCTCAATTGACATATTGTGTTTTTGCTAATAAGGTGGAATTCTATGATGCGAAATAACTATATAGTCTTTTCTACTGGGATTTAAATCATTTTATCTGTTTCTGGCTTAACAGGAAAAATACAACCATGGAAAATTATGATGATTTATTTAATACAATTGCTCTATAGTGTTAATAAAACCTATTAGGTATTTTGCATATTACATATCAAGGAGAGTTTGAATCTCAGGTAGAAAC----------AAAAAAAATACATCAAAAGTTCCTCATGTGAGTGCAGAATTCAATCATCCTGTGCAGGGGTAAGTGAGTCTGAAATGTGTTTTGAGTCTGGCCGTTGTGCATGATGTGAAGTGACAAGTCTAGTCTGCAGTTTTCAGAAACCCTCATTCCTCCCTTGACTGAACTCACCACTTGAACCTCATATGACGTAGAAGAAGCCTACCTATGTCCCCTTCACATGTTGTGGTCAATGTGTCAACTGCACGATCCAGGCCCCTCACCACATCCTCTGCACCAGTCAGTCGAGCGGAGTCACTGCGTCCTGGCAGCAGAAGCTGCACCATGTCCATGTCACCCACGGTCGTCATCCTGGCATGTCTTGGTGAGTCCTGGAAGGGAAGGAGCACCAGGGTTACACTATGGGCCTGCAGATTGGGTGTCTCCCCAGCAGAGAGCCATGTTCTGAAGCAAGTGAGTGGAGAGGATGAGTTAATTTTCAGTCCAGCGTGGCGCCCAGTGGCTCAGGAGGAAAGGGTAGGTTGGTGCCGAGATGAATAGTTCATCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56668915 1847 + 60714840 gcctatacattgactttctacccttaaactgtgctgaagtttgtttctaagatgtaggagcctttgggcagagactatggggtttctaggtatagaaattatctcattttcaaacagagggaatttgactacctctctctactactctcttcttacttggacgccttataattctttctctttcctgattgctcagtccaggacttcaagtactatgttgaataggatggtgagagtgggcattcttgtcttgttttcacttatgaaggggaactccttccagctttcactcattcagtatgatgttgggttgtgggtttgtcatagggcggttcttattatattgagttatgtttcttcaatgcttagcttgttgagggcttttaacatgaagaaatgcttagtaaaaggtatgttctacatgtgtgttgagaagattatgtggtttttatttttagttttgtttaggtgatgaatcacatgtattgatttgtgtatgttcaaccaaccttgcatcctaagaataaagtcgacttgatcatggtggatttgctttttgata----------tgctgcgggattcagttc-ttagtattttggggggatttttgcatctatgttcatcgggaatattggcatgtagttttcttttgtttaatgttcttttctgtctttagtatcagggtgatgccagccttatggaatgagtAAAGGCCACCCTGGGC-AAACAGTGAGACCCATCTCTTTTTAAAAATTATGAGTTTTACAAATTTAAAATGCATAGTGAGAAAGTTCTTACAAACTCCAGAAAGGTAGGTGTAAATAAGAGACATTTGTAAGAATGACAGCACATTAAATGTGTATTTTTCAACCTTCAGTTACTGCAATGTTCCAGTATCAAGTTAGAGGATGTTATC----------------------------------------------------------------------------------------------AGTCTGATATTTTTTCCTCAAATGAGAGAGAGAAAGAAAGACACACAAACAACACAGGGAGAAAAAAAGCAC-ACGTTACAGAGAGACAAAAAGGGAGACAGGGAACTGTGAATTTGGACTCTTGGGTCATAAGACAAATTCTAGATAACACGAGCAGACCCTCAATTGACATATTGTGTTTTTGCTAATAAGGTGGAATTCTATGATGCTAAATAACTATATAGTCTTTTCTACTGAGATTTAAATCATTTGATCTGTTTCTGGCTTAACAGGAAAAATACAACCATGGAAAATTATGATAATTTATTTAATACAATTCCTCTATAATGTTAATAAAACCTATTAGGTATTTTGCATATTACATATCAAGGAGAATTTGAATCTCAGGTGGAAAC-----------AAAAAAATACATCAAAAGTTCCTCATGTGAGTGCAGAATTCAATCGTCCTGTGCAGGGGTAAGTGGGTCTGAGATGTGTTTTGAGTCTGGCCGTTGTGCATGATGTAAAGTGACAAGTCTAGTCTGCAGTTTTCAGAAAGCCTCA-TCCTCCCTTGACTGGACTCCCCACTTGAACCTCATATGACGTAGAAGCAGCCTACCTATGTCCCCTTCGCATGTTGTGGTCAATGTGTCAACTGCACGATCCGGGCTCCTCACCACATCCTCTGCACCGGTCAGTCGAGCGGAGTCACTGCGTCCTGGCAGCAGAAGCTGCACCATGTCCGTGACGCCCATGGTCGTCATCCTGGCGTGTCTTGGTGAGTCCTGGAAGGGAAGGAGCACCAGGGTTACACTGTGGGCCTGCAGATTGGGCGTCTCCCCAGCAGAGAGCCATGTTCTGAAGCAAGTGAGTGGTGAGGCTGAGTTAATTTTCAGTCCAGCATGGCGCCCAATGGCTCAGGAGGAAAGGGCAGGTTGGTGCCGAAATGAATAGTTCATCAT i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 28478 1942 + 40826 GCCtgtacactgactttctacccttaaagtgtgctgaagtttgtttctcagatgcaggagcctttgggcaaagactatggggtttccaggtatagaaattatatcattttcaaacagagataatttgactacctctctctactactgtcgtctaacttggatgccttattattctttctttttcctcattgctctgtctaggacttcaggtactatgttgaataggatggtgagagtgggcattcttgtcttg-tttcacttataaa-aggaactccttccagcttttactcatcccgtgtgatgtt-ggttgtgggttcgtcata-ggtggcacttattatattgaggtatgtttcttcaatgcttagcttgttcacggcttttaacatgaagaaatgctgagtaaaaagcatgccctaca--tgtattgagaagatcatgtggtttttgtctttagttttgtttaggtgatgagtcacatgtattgatttgtgtatgttcaaccaaccttgcatcctaagaatcaagtcgacgtgatcatggtggattagctttctgatg----------tgccgcgggattcagtttgttcgtattttctgcggatttttgcacctgcgttcatcaggaatattggcctgtagttttctttt-tttaatgttcttttctgtcattagtatcagggtgatgttagccttacaaaatgagtAAAGGCCACCCTGGGCAAAAC--AGAGGCCCATCATTTTTTAAAAATTTGGAGTTTTACAAATTTAAAATACACAGTGAAAAAGTTCTCACAAACTCCAGAAAGGCAGCTGTAAGTAAGAGATATTTGTAAGAATGACAGCACAGTAAATGAGTAGATTTGAACCTTCAGTTACTGCAGTGTTCCGGTATCAAGTTGGAGGATGTTATCATTCTGGTATTTTTTCTTCGAGTCAGAGAGAGAAAGACACACAAGCAATATAGAGAGCAGAAAAGCGCAAAGCCAAAGAGAGAGAGAAAGAGAGACTCTGGTATTTTTTCTTCAAGTCagagagagaaagaaagacacacaagcaat-tagagagcagaaaagcacaaagccaaagagagagagaaagagagacagGAAACCGTGAGTTTAAAGTCTTGGGTCATAAGACAAACTCTAGATAAAACGACAAGATCCTCAATCAACATGTTGTGTTTTTGCTAATGAGATGGAAATCTATGATGCTAAATAACTGCACAGTC-TTTCTACTGAGATTTAAATCATTTTACCTGTTTCTGGTTTAATAGTAGAAATACCAGCATGGGAAATTATGATGATTTATTTAATACAATTGCTCAATAATGATAATAAGACCTATTAGGTATTTTGCATATTGCACACGAAGGAGAGTTTCAATCGCAGAGAAAAACAAACAAACAGAAAAAGATTACAACGAAAGTCCTTCATGTGAGTGCACAGTTCAATCGTCCCGGGCTGGGGTAAGTGGGTCTGAGATGTGTTTTGAGTCTGGCCGTCATGCATGACGGGAAGTGACAAGTCTAGTCTGCAGTTTTCAGAAAGCCACATTCCTCCCTTGACCGGACTT-CCACTAGAACCTCATATGAGGTAGAAGAAGCCTACCTGTGTCCCCTTCACATGTTGTGGTCGATGTGTCAACTTCATGATCCAGGCTGCTCACCACATCCTCTGCACCGGTCAGTCGAGCAGAGTCACTGCATCCTGGCAGCAGAAGCTGCACCAAGTCCATGTCGCCCACGGTCGTCATCCTGGCCTGTCTTGGTGAGTCCTGGAAGGGAAGGAGCACCAGGGTTACACTACGGGCCTGCAGATTCGGGGTCT-CCCAACAGGGAGCCGAGTTCTGGAGCAAGCGGGTGGTGAGGCTGAGTGAACGTTCAGCCCAGCGAGGCGCCCAATGGCT-GGGAGGAAAGGGCAGGTTGCTGCAGACATGAATAGTTCATCAT i rheMac3.chrUn_JH290802 I 894 C 0 s papAnu2.chr19 47743203 1851 + 51301725 GCCTGTACACTGACTTTCTACCCTTAAAGTGTGCTGAAGTTTGTTTCTCAGATGCAGGAGCCTTTGGGCAAAGACTATGGGGTTTCCAGGTATAGAAATTATATCATCttcaaacagagataatttgactacCTCTCTCTACTACTGTCTTCTGACTTGGATGccttattattctttctttttcctcattgctctgtctaggacttcaagtactatgttgaataggatggtgacagtgggcattcttgtcttg-tttcacTTACGAA-GGGAACTCCTTCCAGCTTTTactcattcagtgtgatgtt-ggttgtgggttcgTCATA-GGTGGCacttattatattgaggtatgtttcttcaatgctTAGCTTGTTCACGGCTTTTAACACGAAGAAATGCTGAGTAAAAAGCATGCCCTACA--TGTATTGAGaagatcatgtggtttttgtctttagttttgtttaggtgatgaatcacatgtattgatttgtgtatgttcaaccaaccttgcatcctaagAATAAAgtcgacttgatcatggtggattagctttctgatg----------tgctgcggGATTCAGTTGGTTTGTATTTTCTGCGGATTTTTGCACCTgcgttcatcaggaatattggcctgtagttttctttt-ttccatgttCTTTTCTGTCATTAGTATCAGGGTGATGTCAGCCTTACAAAATGAGTAAAGGTCACCCTCGGCAAAACAGAGAGGCCcatcgatttttaaaaatttggagttTTACAAATTTACAATACATAGTGAAAAAGTTCTCACAAACTCTAGAAAGGCAGGTGTAAGTAAGAGACATTTGTAAGAATGACAGCACAGTAAATGAGTAGATTTGAACCTTCAGTTGCTGCAGTGTTCCGGTATCAAGTTGGAGGATGTTATC----------------------------------------------------------------------------------------------ACTCTGGTATTTTTTCTTCaagtcagagagagaaagaaagacacacaagcaatatagagagcagaaaagtgcaaagccaaagagagagagaaagagagacaggaaacCGTGAGTTTAAAGTCTTGGGTCATAAGACAAACTCTAGATAAAATGACAAGATCCTCAGTCGACGTGTTGTGTTTTTGCTAATGAGATGGAAATCTATGATGCTAAATAACTGCACAGTC-TTTCTACTGAGATTTAAATCATTGTATCTGTTTCTGGTTTAATAGTAGAAATACCAGCATGGGAAATTATGATGATTTATTTAATACAATTGCTCAATAATGATAGTAAGACCTATTAGGTATTTTGCATATTGCACATGAAGGAGAGTTTCAATcgcagagaaaaacaaacaaacagaaaaagattaCAACGAAAGTCCTTCATGTGAGTGCACAGTTCAATCTTCCTGGGCTGGGGTAAGTGGGTCTGAGATGTGCTTTGAGTCTGGCCGTCATGCATGATGGGAAGTGACAAGTCTAGTCTGCAGTTTTCAGAAAGCCACATTCCTCCCTTGACCGGACTC-CCACTAGAACCTCATATGACGTACAAGAAGCCTACCTGTGTCCCCTTCACATGTTGTGGTCAATGTGTCAACTTCATGATCCAGGCTCCTCACCACATCCTCTGCACCGGTCAGTCGAGCAGAGTCACTGCGTCCTGGCAGCAGAAGCTGCACCAAGTCCATGTCGCTCACGGTCGTCATCCTGGCCTGTCTTGGTGAGTCCTGGAAGGGAAGGAGCACCAGGGTTACACTACGGGCCTGCAGATTCGGGGTCT-CCCAACGGGGAGCCGTGTTCTGGAGCAAGCGGGTGGTGAGGCTGAGTGAACGTTCAGCCCAGCGAGGCGCCCAATGGCT-GGGAGGAAAGGGCAGGTTGCTGCAGACATGAATAGTTCATCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47422250 1861 + 50890351 GCCtgtacactgactttctacccttaaactgtgctgaagtttgtttctcagatgcaggagcctttggccacagactatggggtttctaggtatagaaattatatcatcttcaaacagagataatttgactacctctctctactactgtcgtctgacttggatgccttattattctttctttttcctcattgctctgtctaggacttcaagtactatgttgaataggatggtgacagtgggcattcttgtcttg-tttcacttatgaa-gggaactccttccagcttttactcattccgtgtgatgtt-ggatgtgggttcgtcata-ggtggcacatattatattgaagtatgtttcttcaatgcttagcttgttcacggctttcaacacgaagaaatgctgaataaaaagcatgctctaca--tgtattgagaaaatcatgtggtttttgtctttagttttgtttaggtgatgagtcacatgtattgatttgtgtatgttcaaccaaccttgcatcctaagaatcaagtcgacttgatcatggtggattagctttctgatgtgctgctaattgctgcaggattcagtttgttcgtattttctgcagatttttgcacctgcgttcatcaggaatattgacctgtagttttctttt-tttaatgttcttttctgtcgttagtatcaggatgatgtcagccttacaaaatgagtAAAGGCCACCCTGGGCAAAACAGAGAGGCCCATCGTTTTTTAAAAATTTGGAGTTTTACAAATTTAAAATACATAGTGAAAAAGTTCTCACAAAGTCCAGAAAGGCAGCTGTAAGTAAGAGATATTTGTAAGAATGACAGCACAGTAAATGAGTAGATTTGAACCTTCAGTTACTGCAGTGTTCCAGTATGAAGTTGGAGGATGTTATC----------------------------------------------------------------------------------------------ACTCTGGTATTTTTTCTTCAAGTCagagagagaaagaaagacacacaagcaatatagagagcagaaaagcacaaagccaaagagagagagaaagagagacagGAAACCGTGAGTTTAAAGTCTTGGGTCATAAAACAAACTCGAGATAAAACAACAAGATCCTCAATCGACATGCTGTGTTTTTGCTAATGAGATGGAAGTCTATGATGCTAAATAACTGCACAGTG-TTTCTACTGAGATTTAAATCATTTTTTCTGTTTCTGGTTTAATAGTAGAAATACCAGCATGGAAAATTATGATGATTTATTTAATACAATTGCTCAATAATGATCATAAGACCTATTAGGTATTTTGCATATTGCACATGAAGGAGAGTTTCAATCGCAGAGAAACACAAACAAACAGAAAAAGATTACAACGAAAGTTCTTCATGTGAGTGCACAGTTCAATCGTCCTGGGCTGGGGTAAGTGGCTCTGAGATGTGTTTTGAGTCTGGCCGTCATGCATGACGGGAAGTGACAAGTCTAGTCTGCAGTTTTCAGAAAGCCACATTCCTCCCTTGACCGGACTC-CCACTAGAACCTCATATGACGTAAAAGAAGCCTACCTGTGTCCCCTTCACATGTTGCGGTCGATGTGTCAACTTCATGATCCAGGCTCCTCACCACATCCTCTGCACTGGTCAGTCGAGTGGAGTCACTGCGTCCTGGCAGCAGAAGCTGCACCAAGTCCATGTCGCCCACGGTCGTCATCCTGGCCTGTCTTGGTGAGTCCTGGAAGGGAAGGAGCACCAGGGTTACACTGCGGGCCTGCAGATTCGGGGTCT-CCCAGCAGAGAGCCGTGTTCTGGAGCAAGCAGGTGGTGAGGCTGAGTGAACGTTCAGCCCAGCGAGGCGCCCAATGGCT-GGGAGGAAAGGGCAGGTTGGTGCAGACATGAATAGTTCATCAT i chlSab2.chr6 I 1003 C 0 e canFam3.chr1 102735914 0 + 122678785 I e calJac3.chr22 45864046 94120 + 49145316 T a score=205178.000000 s hg38.chr19_GL949747v2_alt 421731 180 + 729520 GATCTTTCTTTGCAGGGTTCTTCTTGGACCAGAGTGTGTGGGCACACGTGGGTGAGTCCTTCCCCAAATGATGGGTTGCCATCTTCACCCCAATACAAGTGAATTTTCCGGAAATGGGAGGGAGGCAGCACAGAGGGTGGGCTGATGGGCTGACCATGGGAAGGCCTGGGGGGAGTCTCT---------- s panTro4.chr19 59754451 170 + 63644993 GATCTTTCTTTGCAGGGTTCTTCTTGGACCAGAGCGTGTGGGCACACGTGGGTGAGTCCTTCCCCAAATGATGGGTTGCCATCTTCACCCCAATACAAGTGAATTTTCCGGAAATGGGAGGGAGGCAGCACAGAGGGTGGGCTGATGGGCTGACCATGGGAAGGCCTGGG-------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56670762 170 + 60714840 GATCTTTCTTTGCAGGGTTCTTCTTGGACCAGAGCGTGTGGGCACACGTGGGTGAGTCCTTCCCCAAATGATGGGTTGCCATCTTCACCCCAATACAAGTGAATTTTCCAGAAATGGGAGGGAGGCAGCACAGAGGGTGGGCTGATGGGCTGACCATGGGAAGGCCTGCG-------------------- i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 30420 166 + 40826 GATCTTTCTTTGCAGGGTTCTTCTTGGACCAGAGGGTGCGGGCACACGTGGGTGAGTCCTT-CCCAAATGATGGGTTGCCATCCCCA--CCAATACAAGTGAATTTTCCTGAGAAGGGAGGCAGGCAGCACAGAGGGC-GGCTGATGGACTGACCATGGGAAAGCCTGTG-------------------- i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47745054 166 + 51301725 GATCTTTCTTTGCAGGGTTCTTCTTGGACCAGAGGGTGTGGGCACACGTGGGTGAGTCCTT-CCCAAATGATGGGTTGCCATCCCCA--CCGATACAAGTGAATTTTCCTGAGAAGGGAGGCAGGCAGCACAGAGGGT-GGCTGATGGACTGACCGTGGGAAAGCCTGTG-------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47424111 166 + 50890351 GTTCTTTCTTTGCAGGGTTCTTCTTGGACCACAGGGTGCGGGCACACGTGGGTGAGTCCTT-CCCAAATGATGGGTTGCCATCTCCA--CCAATACAAGTGAATTTTCCTGAGAAGGGAGGCAGGCAGCACAGAGGGC-GGCTGATGGACTGACCATGGGAAAGTCTGTG-------------------- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102914294 138 + 122678785 GATCCTCTCTTTCAGCGCTCTGCCTGGGTGGAGGGCTCCACGCACAGCAGGGTGAGTCTCCTCCTCA---------TCCTCTTTGCATCCCAA-----------------------------AGGCAGCTC--TGGACAGGATGGTG--CTGACCCTGGGAGGGCCTGGG----------AGGAGGCCCT i canFam3.chr1 n 0 n 0 e calJac3.chr22 45864046 94120 + 49145316 T a score=606142.000000 s hg38.chr19_GL949747v2_alt 421911 568 + 729520 CATGAACTAGTAAGAGGAGATCCTGGGAGTCTCTCATGAACTAGTAAGAGGAGATCCTGGGAGTCTCTCATGAACTAGTAAGAGGAGATCCTGGTATGCTCAGCCTTCTGTTTTGTCTTAGCCCTCCCCAGCCTTTCTTCCCCATGGCTGAGTTGAGCTCTGTGTGGCCCAGGCGGGATACTGAGGTGCTCAAAGCTGGGGTGTGTGGG---GGGATGTGGTGTCACCGACAGAGGAGGGAAGGGTAGCAGTGTTAGGAACAGCAGGTCCTCTGAGGACAAGAGGGTAACTCACACCCTCCAGCGTTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTGCCAGAAGAGGTGGGGGAACCACAGCCACGACCCTGCCATTCCAAATCCTCTGATGGAGCTCAGTTGTTTATTGTGGTTCAGGCATTAGCTAATATTCCATTCACAAAGGTCATACCCTCCACCCCATGTCTACTTTGTGTTGTTTGGTGTAACTAATCTTGCAGTATTAAAATCTAGTAAGAGTCCCTTACTCAGCACCTGCTC--AGTTCTCAACTGACACTTT s panTro4.chr19 59754621 546 + 63644993 ------------------------GGGAGTCTCTCATGAAGTAGTAAGAGGAGATCCTGGGAGTCTCTCATGAACTAGTAAGAGGAGATCCTGGTATGCTCAGCCCTCTGTTTTGTCTTAGCCCTCCCCGGCCTTTCTTCCCCATGGCTGAGTTGAGCTCTGTGTGGCCCAGGCGGGATACTGAGGTGCTCAAAGCTGGGGTGTGTTGG---GGGATGTGGTGTCACCGACAGAGGAGGGAAGGGTAGCAGCATTAGGAACAGCAGGTCCTCTGAGGAGAAGAGGGTAACTCACACCCTCCAGCGTTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTATCATTCTACCAGAAGAGGTGGGGGAACCACAGCCACGACCCTGCCATTCCAAATCCTCTGAAGGAGCTCAATTGTTTATTGTGGTTCAGGCATTAGCTGATATCCCATTCACAAAGATCATACCCTCCACCCCGTGTCTACTTTGTGTTGTTTGGTGTAACTAATCTTGCAGTATTAAAATCTAGTAAGAGTCCCTTACTCAGCACCTGCTCAAAGTTCTCAGCTGACACTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56670932 510 + 60714840 -----------------------------------------------------------GGAGTCTCTCATGAACTAGAAAGAGGAGATCCTGGTATGCTCAGCCCTCTGTTTTGTCTTAGCCCTCCCCAGCCTTTCTTCCCCATGGCTGAGTTGAGCTCTGTGTGGCCCAGGCAGGATACTGAGGTGCTCAAAGCTGGGGTGTGTGGG---GGGATGTGGTGTCACCGACAGAGAAGGGAAGGGTAGCAGCGTTAGGAACAGCAGGTCCTCTGAGGACAAGAGGGTAACTCAC-CCCTCCAGCGTTTCCATGACGGTAGGGAATGCAGTGTGGCTGCTGTCATTCTGCCAGAAGAGGTGGGGGAACCACAGCCACGACCCTGCCATTCCAAATCCTCTGATGGAGCTCAGTTGTTTATTGTGGTTCAGGCATTAGCTGATATTCCATTCACAAAGATCATACCCTCCACCCCGTGTCTACTTTCTGTTGTTTGGTGTAACTAATCTTGCAGTATTAAAATCTAGTAAGAGTCCCTTACTCAGCACCTGCTCAAAGTTCTCAGCTGACACTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 30586 515 + 40826 ------------------------GG---------------------------------GAAATCTCTCGTGAACTAGGAAGAGGAGACCCTGGGATGCTCGGCCCTGAGTTCTGTCTTATCCCTCCCCAGCCGTTCTTCCCCGTGGCTGAGTCTAGCTCTGTGTGGCCCAGG-TGGAGACTTGGGCGCTCAAAGCTGGGGTGTCAGGGGATGGGATATGGTGTCACTGGCAGAGGAGAGAAGGGAAGCAGTGCTAGGAACAGCAGGTCCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGTGTTTCCATGATGGTCGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTGGGGGAACCACAGTCATGACCCTGACATTCCAATCCCTCTGATGGGGCTCAGTTGTTTATTATGGTTCAGGCATTAGCTGATATTCCATCCACAAAGGTCGTACCCTCCGCCGCGTGTCTACTTTGTGTTGTTTGGTGTAACCAATCTTGCAGTATTAAAATCTAGTAAGAGTTCCATACTCAGCACCTGCTCAGAGTTTTCAGCCCATACTTT i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47745220 515 + 51301725 ------------------------GG---------------------------------GAAATCTCTCGTGAACTAGGAAGAGGAGACCCTGGGATGCTCGGCCCTGAGTTCTGTCTTATCCCTCCCCAGCCGTTCTTCCCTGTGGCTGAGCCTAGCTCTGTGTGGCCCAGG-GAGAGACTTGGGCGCTCAAAGCTGGGGTGTCGGGGGATGGGATATGGTGTCACtggcagaggagggaagggaagcaaTGCTAGGAACAGCAGGTCCTCTGAGGACAAGAGGGTAAATCACTCTCTCCAGTGTTTCCATGATGGTCGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTGGGGGAACCACAGTCACGACCCTGACATTCCAATCCCTCTGATGGGGCTCAGTTGTTCATTATGGTTCAGGCATTAGCTGATATTCCATCCACAAAGGTCGTACCCTCAGCTGCATGTCTACTTTGTGTTGTTTGGTGTAACCAATCTTGCAGTATTAAAATCTAGTAAGGGTTCCGTACTCAGCACCTGCTCAGAGTTTTCAGCCCATACTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47424277 515 + 50890351 ------------------------GG---------------------------------GAAATCTCTCGTGAACTAGGAAGAGGAGACCCTGGGATGCTCGGCCCTGAGTTCTGTCTTATCCCTCCCCAGCCATTCTTCCCCGTGGCTGAGTCTAGCTCTGTGTGGCCCAGG-GGGAGACTCGGGCGCTCAAAGCTGGGGTGTGGGGGGAGGGGATATGGTGTCACTGGCAGAGGAGGGAAGGGAAGCAGCGCTAGGAACAGCAGGTCCTCTGAGGACAAGAGGGTAAATCACTCCCTCCAGTGTTTCCATGATGGTCGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTGGGGGAACCACAGTCATGACCCTGACATTCTAATCCCTCTGATGGGGCTCAGTTGTTTATTATGGTTCAGGCATTAGCTGATATTCCATTCACAAAGGTCGTACCCTCTGCCGCGTGTCTACTTTGTGTTGTTTGGTGTAACCAATCTTGCAGTATTAAAATCTAGTAAGCGTTCCGTACTCAACACCTGCTCAGAGTTTTCAGCCCATACTTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102914432 0 + 122678785 I e calJac3.chr22 45864046 94120 + 49145316 T a score=67540.000000 s hg38.chr19_GL949747v2_alt 422479 52 + 729520 TGTTGTAGGGAGAC--GCCACGTCTAT------GCGGGATGGGTCCTTCCTGTAGCCCCA s panTro4.chr19 59755167 52 + 63644993 TGTTGTAGGGAGAC--ACCATGTCTAT------GCAGGATGGGTCCTTCCTGTAGCCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56671442 52 + 60714840 TGTTGTAGGGAGAC--GCCATGTCTAT------GCGGGATGGGTCCTTCCTGTAGCCTTG i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 31101 52 + 40826 TGTTGTAGGGAGAC--ACCATGTCCAT------GCTGGATAAGTTCTTCCTGTAGCCCTG i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47745735 52 + 51301725 TGTTGTAGGGAGAC--GCCATGTCTAT------GTGGGATGGGTTCTTCCTGTAGCCCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47424792 52 + 50890351 TGTTGTAGGGAGAC--GCCATGTCCAT------GCTGGATAGGTTCTTCCTGTAGCCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45769926 60 + 49145316 TATTCCAGGAAGACCTTCCATGTCCACTCTGGGGTGGGCCGGGTCCCTGTCCCACCACCA i calJac3.chr22 T 94120 C 0 e canFam3.chr1 102914432 0 + 122678785 I a score=18029.000000 s hg38.chr19_GL949747v2_alt 422531 16 + 729520 GGC-------ACCCAGGTGTGGT s panTro4.chr19 59755219 23 + 63644993 GGCACCCAGGACCCAGGTGTGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56671494 16 + 60714840 GGC-------ACCCAGGTGTGGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 31153 16 + 40826 GAC-------ACCCAGGTGTGGT i rheMac3.chrUn_JH290802 C 0 I 260 s papAnu2.chr19 47745787 16 + 51301725 GAC-------ACCCAGGTGTGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47424844 16 + 50890351 GAC-------ACCCAGGTGTGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45769986 15 + 49145316 GGT-------ACCCAGG-GCATC i calJac3.chr22 C 0 C 0 s canFam3.chr1 102592183 15 + 122678785 GGT-------AGCAGGGTGAGT- i canFam3.chr1 n 0 C 0 a score=79299.000000 s hg38.chr19_GL949747v2_alt 422547 69 + 729520 AGGAGCCT-----------------TAGAAA-GAAGAAATGGGGAGAATCTTCTGAGCAC----AGGGAGGGAGGGGCAGC----------------TCAACATACT s panTro4.chr19 59755242 69 + 63644993 AGGAGCCT-----------------TAGAAA-GTGGAAATGGGGAGAATCTTCTGAGCAC----AGGGAGGGAGGGGCGGC----------------TCCACATCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56671510 74 + 60714840 AGGAGCCT-----------------TAGAAACATGGAAATGGGGAGAATCTTCTGAGCACAGGGAGGGAGGGAGGGGCGGC----------------TCCACATTCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 31429 70 + 40826 AGGAGCCT-----------------TAGAAACACGGAAAGGGGAAGAATATTCTGAGCAC----ATGGAGGGAGGGGTGAC----------------TCCACATCCT i rheMac3.chrUn_JH290802 I 260 C 0 s papAnu2.chr19 47745803 70 + 51301725 AGGAGTCT-----------------TAGAAAGATGGAAAGGGGAAGAATCTTCTAAGCAC----ATGGAGGGAGGGGCGAC----------------TCCACATCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47424860 70 + 50890351 AGGAGCCT-----------------TAGAAACATGGAAAGGGGAAGAATCTTCTGAGCAC----ACGGAGGGAGGGGCGAC----------------TCCACATCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45770001 86 + 49145316 AGGGGCTTCATGTTACAGGGCAAAGCAGAACAGTGGGAAGAAGGA-AAGCCCCCAAGGAC----AGTGGCGGGTGGGGGGC----------------TCCACACTCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 102592198 85 + 122678785 GGGTTCTC-----------------TAGAAG-GGATATACCTGAAGAGTTTCCTAGCTCT----TAGGAGGTGGGGGGAATCTTCCTACCCCCATGGTCAACACACT i canFam3.chr1 C 0 n 0 a score=417508.000000 s hg38.chr19_GL949747v2_alt 422616 247 + 729520 CCTCTCTGAGGCGGCATCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTCTGCTCTGCCTGGCCCAGCGCTGTGGTGCCTCAAGGAGGACACGTGACTCTTCGGTGTCACTGTCGTCGTGGGTTTAACATCTTCACGCTGTACAAGAAAGATGGGG--------TCCCTGTCCCTGAGCT----------CTACAACAGAATATTCTGGAACAGTTTCCTCATTAGCCCTGTGACCCCAGCACACGCAGGGACCTACAGATGT s panTro4.chr19 59755311 247 + 63644993 CCTCTCTAAGGCAGCATCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTCTGCTCTGCCTGGCCCAGCGCTGTGGTGCCTCAAGGAGGACACGTGACTCTTCGGTGTCACTATCGTCGTGGGTTTAACATCTTCACGCTGTACAAGAAAGATGGGG--------TCCCTGTCCCTGAGCT----------CTACAACAGAATATTCTGGAACAGTTTCCTCATTAGCCCTGTGACCCCAGCACACGCAGGGACCTACAGATGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56671584 247 + 60714840 CCTCTCTAAGGCGGCATCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTCTGCTCTGCCTGGCCCAGCGCTGTGGTGCCTCAAGGAGGACACGTGACTCTTCGATGTCACTATCGTCGTGGGTTTAACATCTTCACGCTGTACAAGAAAGATGGGG--------TCCCTGTCCCTGAGCT----------CTACAACAGAATATTCTGGAACAGTTTCCTCATTAGCCCTGTGACCCCAGCACACGCAGGGACTTACAGATGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 31499 247 + 40826 CTTCTCTAAGGCGGCACCTCCTTCTCCCCCAGGTGGTCAGGACAAGCCCTTCTGCTCTGCCTGGCCCAGCGCTGTGGTGCCTCAGGGAGGACACGTGACTCTTTGGTGTCACTATCGTCCTGGGTTTAACATCTTCACGCTGTACAAGGAAGACGGGG--------TGCCTGTCCCTGAGCT----------CTACAAAAGAATATTCTGGAACAGTTTCCTCATTAGCCCTGTGACTGCAGCACATGCAGGGACCTACAGATGT i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47745873 247 + 51301725 CCTCTCTAAGGCGGCACCTCCTTCTCCCCCAGGTGGTCAGGACAAACCCTTCTGCTCTGCCTGGCCCAGCGCTGTGGTGCCTCAGGGAGGACACGTGACTCTTTGGTGTCACTATCGTCCTGGGTTTAACATCTTCACGCTGTACAAGGAAGATGGGG--------TGCCTGTCCCTGAGCT----------CTACAAAAGAATATTCTGGAACAGTTTCCTCATTAGCCCTGTGACTGCAGCACATGCAGGGACCTACAGATGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47424930 247 + 50890351 CCTCTCTAAGGCGGCACCTCCTTCTCCCCCAGGTGGTCAGGACAAGCCCTTCTGCTCTGCCTGGCCCAGCCCTGTGGTGCCTCAGGGAGGACACGTGACTCTTTGGTGTCACTATCATCCTGGGTTTAACATCTTCACGCTGTACAAGGAAGACGGGG--------TGCCTGTCCCTGAGCT----------CTACAAAAGAATATTCTGGAACAGTTTCCTCATTAGCCCCGTGACTGCAGCACACGCAGGGACCTACAGATGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45770087 243 + 49145316 CCTCTCT-AGGCTGCGCCTCCTCCTCTTCCAGGTGCTCTGTACAAACTCTCCCTGTCAGCCCGGCCGAGCCCTGTGGTTCCCCAGGGAGGACGTGTGACTCTCTCCTGTGATTCTCATCTTCGGTTTGTCACATTCAAAATATACAAAACATCTGGGA--------CCCAGGACCGTGAGCT----------GCAC-ACTGGCCGTTCC--AATGACTTCACCATCAACCCTGTGACCCCAGGACATGCAGGGACCTACAGATGT i calJac3.chr22 C 0 I 1317 s canFam3.chr1 19892845 264 - 122678785 CCCATTTAACACAGCCCCTCC-CCTCTCCTAGGGATGCACAGCAAACCCAGCCTCTCAGTTCTGCCCAGCCCTATCGTGCCCTCAGGAGGGAACGTGACCCTCCAGTGTGGTTCATGGAGAGGATTTAACAGGTTTATTCTGATGAGGGAAGTAGAAGGCCAGCCCTCCTGGACCCGGGACTCCCAGCGAGCCCCCAGTGGAGAGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGATCCCCAGCCTCATGTGGACGTTCAGATGC i canFam3.chr1 I 91799 C 0 a score=143474.000000 s hg38.chr19_GL949747v2_alt 422863 75 + 729520 CGAGGTTTTCACCCGCACTCCCCCACTGAGTGGTCGGCACCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAG s panTro4.chr19 59755558 75 + 63644993 CGAGGTTTTCACCCGCACTCCCCCACTGAGTGGTCGGCACCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56671831 75 + 60714840 CGAGGTTTTCACCCGCACTCCCCCACTGAGTGGTCGGCACCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 31746 75 + 40826 CGAGTTTTTCATCCGCACTCCCCCACTGAGTGGTCGGCACCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAG i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47746120 75 + 51301725 CGAGTTTTTCATCCGCACTCCCCCACTGAGTGGTCGGCACCCAGCAACCCCCTGGCGATCATGGTCACAGGTCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47425177 75 + 50890351 CGAGTTTTTCATCCGCACTCCCCCACTGAGTGGTCGGCACCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771647 75 + 49145316 TGTGGTTCTTTCAGTCACTCCCGCTATGAGTGCTCGGCTCCCAGCGACCCCCTGGAGATTGTGATCACAGGTGAG i calJac3.chr22 I 1317 I 638 s canFam3.chr1 19893109 75 - 122678785 CATGGTTTTTACAGCAACACCCCCCAGGTGTGGTCACTCCCCAGTGACCCTCTGGAGCTGCTGGTCTCAGGTGAG i canFam3.chr1 C 0 C 0 a score=544436.000000 s hg38.chr19_GL949747v2_alt 422938 464 + 729520 AGGGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAGTCCCAGAGCTTCTGGTGGGGGTGTCCACCAGAGTCCGATCATCCAGGCCCCAACTAT-ATTTGGGGTAAAGggggattgaatacaggggaatgggtgctg----------tgttggaaagaataactgtccccatcgatggccacattgtaatccttggagcctgtgac----tatgttatagggcaggggactgaaggggaagatggag-ctcaggttgttgatgagttgaccttgagatggggagatggcctggaccctcccactgggc-tcagtgtaatcacaagggtccatatgagtggagaaggaagaggagaatggggattagagcagcat------cgtgggatactccaccagccactgtgggcttt-------gaaggtggaggaagaccac------gagccacga---------------aggggctggagaaatc-----aatggaactgattctccc--gagtctccag s panTro4.chr19 59755633 468 + 63644993 AGGGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCGGAGTCCCAGAGCTTCTGGTGGGGGTGTCCACCAGAGTCCGATCATCCAGGCCCCAACTgt-atttggggtaaagggggattgaatacaggggaatgggtgctg----------tgttgggaagaataactgtccccatcgatggccacattgtaatccttggagcctgtgactatttatgttatagggcaggggattgaaggggaagatggag-ctcaggttgttgatgagttgaccttgagatggggagacggcctggactctcccactgggc-tcagtgtaatcacaagggtccatatgagtggagaaggaagaggagaatggggattagagcagcgt------cgtgggatactccaccagccactgtgggcttt-------gaaggtggaggaagaccac------gagccatga---------------aggggctggagaaatc-----aatggaactgattctccc--gagtctccag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56671906 467 + 60714840 AGGGCTCCTGTCTGGGCTTCTCCTTGTTCCACCTCCTGAATCCCAGAGCTTCTGGTGGGGGTGTCCACCAGAGTCCAATCATCCAGGCCCCGACTgt-atttggggtaaagggggattgaatacaggggaatgggtgctg----------tgtcgggaagaataactgtccccattgatggccacattgtaatgcttggagcctgtgactatttatgttatagggcaggggactgaaggggaagatgggg-ctcaggttgttgatgagttgaccttgagat-gggagatggcctggactctcccactgggctttagtgtaatcacaagggcccacatgagaggaggaggaagaggagaatggggattagagcagcgt------cgtgggagactccaccagccactgtggg-ttt-------gaaggtggaggaagaccac------gagccacaa---------------aggggctggagaagtc-----aagggaactgattctccc--tagtctccag i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 31821 494 + 40826 AGGGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGCTGGGGgtgtccgtcagggtcccatcatccaggccctgactgt-atttggggtaaa-ggggatttaatacaggggaatgggtgctgggaggaagaatggtgggaagaataactgtccccattgatggccacattgtaatccgtggaccctgtggctctttatgttatagggcaggggactgaaggggaagatggag-ctcaggatgttgatgagttgaccttgagatggggagacggcctggactgtcccgctgggc-tcagtggaatcacaagggtcctcaagacaggaggaggaagaggggagtggggattacagcagcat------catgggagactccatcagccactgtgggcttt-------gaaggtggaggaaggtcac------gagtcacaaaggcaggaggcctataggggctggagaagtc-----aagggaactgattctcccctgagtctccag i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47746195 485 + 51301725 AGGGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGGGTGTCCACCAGGGTCCCATCATCCAGGCCCTGACTGT-ATTTGGGGTAAAGGGGGATTGAATACATGGAAATGGGTGCTG----------TGGTGGGAAGAATAACTGTCCCCACTGATGGCCACATTGTAATCCGTGGACCCTGTGACTCTTTATGTTATAGGGCGGGGGACTGAAGGGGAAGATGGAG-CTCAGGTTCTTGATGAGTtgaccttgagatggggagatggcCTGGACTGTCCCGCTGGGC-TCAGTGGAATCACAAGGGTCCTCAtgacaggaggaggaagaggggagtgGGGATTACAGCAGCAT------CATGGGAGACTCCATCAGCCACTGTgggcttt-------gaaggtggaggaaggtcAC------GAGTCACAAAGGCAGGAGGCCTATAGGGGCTGGAGAAGTC-----AAGGGAACTGATTCTCCCCTGAGTCTCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47425252 485 + 50890351 AGGGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGCTGGGGGTGTCCGTCAGGGTCCCATCATCCAGGCCCTGACTgt-atttggggtaaagggggatttaatacaggggaatgggtgctg----------tggtgggaagaataactgtccccactgatggccacattgtaatccgtggaccctgtgactctttatgttatagggcaggggactgaaggggaagatagag-ctcaggttgttgatgagttgaccttgagatggggagacggcctggactgtcccgctgggc-tcagtggaatcacaagggtcctcatgacaggaagaggaagaggggagtggcgattacagcagcgt------catgggagactccatcagccactgtgggcttt-------taaggtggaggaaggtcac------gagtcacaaaggcaggaggcgtataggggctggagaagtc-----aatggaactgattctcccctgagtctccag i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19893184 314 - 122678785 ---------------------------------------------------------------------AAAGTCTGATTTTT---GCCTCATCTGTGGTTTGAGGCA--------------CCAGACAAGTTATTGCAG-----------------------ATCTGCTCCCA---------------------GGAGACCTTCAGAC------------ATAACAGTGGGGTG-AGGGGACCATGGGGTCACAGGTCA----------GAAACTGAGAGGGTGAG--------------------GGAC---AGTGAGACC-CAGGAGTC---AGGATGGGAGAAGGGAG----GATTGGGGA--GAATCAGCCTACAATCCATGG-----CCTACAATCCATGGCTGGTCTTCTCCCAGGTGTGTTGGGGAAGCCCTCCCTCTTGACCCAGCA---------------GGGCCCTGTTGTGACCTCTGGACAGAACCTGACCCTCCA--GTGTCTCTCT i canFam3.chr1 C 0 I 257 e calJac3.chr22 45771722 638 + 49145316 I a score=294901.000000 s hg38.chr19_GL949747v2_alt 423402 233 + 729520 agggaatgcagccctgcagatgccttgattgtagcccaggaagaacagggtctgatttctg-tctccagaagtggaaggggtcagtgtgttctctcctgccgccatgtttgtgataattttctccagcaacatcaggaaaccaacacaggaacccaggtgaaggacaagttaaaaaaccaaacaagaaggttggctaccctgagatcagcaagggtgcactgctgatgccacca s panTro4.chr19 59756101 233 + 63644993 agggaatgcagccctgcagatgccttgattgtagcccaggaagaacagggtctgatttccg-tctccagaagtggaaggggtcagtgtgttctctcctgccgccatgtttgtgataattttctccagcaacaacaggaaaccaatacaggaacccaggtgaaggacaagttaaaaaaccaaacaagaaggttagctaccctgagattagcaagggtgcactgctgatgccacca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56672373 233 + 60714840 agggaatgcagccctgcagatgccatgattgtagcccaggaagaacagggtctgatttctg-tctccagaagtggaaggggtcagtgtgttctctcctgctgccatgtttgtgataattttctccagcaacaacaggaaaccaacacaggaacccaggtcaaggacaagttaaaaaaccaaacaagaaggttggctaccctgagatcagcgagggtgcactgctgatgccacca i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 32315 233 + 40826 agggaacacagccctgtagatgccttgattttagcccaggaagaactggatccaatttctgttctccagaagtggaa-gggtcagtgtgttctctcctgccgccatgtttgtgataattttctacagcagcaacaggaaaccaacacaggaacccaggtcaaggacaagtttaaaaaccaaacaagagggttggctaccccgagatcagcaaaggtgcactgctgatgccacca i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47746680 234 + 51301725 AGGGAACACAGCCCTGTAGAtgccttgattttagctcagGAAGAACTGGATCCAATTTCTGTTCTCCAGAAGTGGAAGGGGTCAGTGtgttctctcctgctgccatgtttGTGATGATTTtctacagcagcaacaggaaaccaacacaggaacCCAGGTCAAGGACaagtttaaaaaccaaacaagagGGTTGGCTACCCCGAGATCAGCAACGGTGCACTGCTGATGCCACCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47425737 234 + 50890351 ggggaacacagccctgtagataccttgattttagcccaggaagaactggatccaatttctgttctccagaagtggaaggggtcagtgtgttctctcctgctgccatgtttgtgataattttctatagcagcaacaggaaaccaacacaggaacccaggtcaaggacaagtttaaaaatcaaacaagagggttggctaccctgagatcagcaaaggtgcattgctgatgccacca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19893498 257 - 122678785 I e calJac3.chr22 45771722 638 + 49145316 I a score=177902.000000 s hg38.chr19_GL949747v2_alt 423635 155 + 729520 ccaggctggaaccacatagggaggGATCGACAGGAAGAGTTGGGGGTGgagggt-gagagagagagagagagagagagCACTAGGCCATAGAGCAGGGCAGTGAGTTCTCAG----------CTCAGGTGGGAGGGGAGCTGTGACAAGGAAGAACC--TCCCTGA-GG s panTro4.chr19 59756334 151 + 63644993 ccaggctggaaccacatagggaggGATCGACAGGAAGAGTTGGGGGTGGAGGGT-----GAGAGGGAGAGAGAGAGAGCACTAGGCCATAGAGCAGGGGAGTGAGTTCTCAG----------CTCAGGTGTGACAGGAGCTGTGACAAGGAAGAACC--TCCCTGA-GG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56672606 147 + 60714840 ccaggctggaaccacacagggaggGATCGACAGGGAGAGTTTGGGGTGGAGGGT---------GAGAGAGAGAGAGAGCACTAGGCCATAGAGCAGGGAAGAGAGTTCTCAG----------CTCAGGTGTGAGGGGAGCTGTGAGAAGGAAGAACC--TCCCTGA-GG i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 32548 147 + 40826 ccaggctggagccacatagggaggGAACGACAGGGAGAGTCGGGGGTGGAGGGT-----------GAGAGAGAGAGAGCATTAGGTCATAGAGCAGGGGAGTGAGTTCTCAG---------CCTCAGGTGTGATGGGAGCTGTGACAAGGAAGAACC--TCCCTGAGGG i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47746914 141 + 51301725 CCAGGCTGGAGCCACATAGGGAGGGAATGACAGGGAGAGTcgggggtggagggt---------------gagagagagcattaggTCATAGAGCAGGGGAGTGAGTTCTCAG----------CTCAGGTGTGAGGGAAGCTGTGACAAGGAAGAACC--TCCCTGA-GG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47425971 153 + 50890351 ccaggctggagccacatagggaggGAAGGACAGGGAGAGTCGGGGGTGgagggt---gagagagagagagagagagagCATTAGGTCATAGAGCAGGGGAGTGAGTTCTCAG----------CTCAGATGTGAGGGGAGCTGTGACAAGGAAGAACC--TCCCTGA-GG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19893755 143 - 122678785 CCTGAGGGGAACCCC--AGGTAGTGGCCGCCAGGA----CCAAGGGTGTGGGGTCCACAGGGAGGGAGAGAGACAGAGAAACCGGGGATAAAG-ATGGGAGAGA---CTCAGAGGACACAGACTCAGGT-----------CAAGACAAGGCTGGACCAACCCTT----- i canFam3.chr1 I 257 C 0 e calJac3.chr22 45771722 638 + 49145316 I a score=441784.000000 s hg38.chr19_GL949747v2_alt 423790 264 + 729520 AAACTGCCTCTTCTCCTTCCAGGT---CTATATGAGAAACCTTCGCTTACAGCCCGGCCGGGCCCCACGGTTCGCGCAGGAGAGAACGTGACCTTGTCCTGCAGCTCCCAGAGCTCCTTTGACATCTACCATCTATCCAGGGAGGGGGAAGCCCATGAACTTAGGCTCCCTGC------------AGTGCCCAGCATCAATGGAACATTCCAGGCCGACTTCCCTCTGGGTCCTGCCA------CCCACGGAGAGACCTACAGATGCTTCGGCTCTTTCCATGGA s panTro4.chr19 59756485 264 + 63644993 AAACTGCCTCTTCTCCTTCCAGGT---CTATATGAGAAACCTTCACTCACAGCCCGGCGGGGCCCCACAGTTCGCACAGGAGAGAACGTGACCTTGTCCTGCAGCTCCCGGAGCTCCTTTGACATCTACCATCTATCCAGGGAGGGGGAGGCCCATGAACTTAGGCTCCCTGC------------AGTGCCCAGCGTCAATGGAACATTCCAGGCCGACTTCCCTCTGGGTCCTGCCA------CCCACGGAGAGACCTACAGATGCTTTGGCTCTTTCCATGAA i panTro4.chr19 C 0 T 94754 s ponAbe2.chr19 56672753 264 + 60714840 AAACTGCCTCTTCTCCTTCCAGGT---CTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTTGCGCAGGAGAGAACGTGACCTTGTCCTGCAGCTCCTGGAGCTCCTTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCCATCAACTTAGGCTCCCTGC------------AGTGCCGAGCATCAATGGAACATTCCAGGCCGACTTCCCTCTGGGCCCTGCTA------CCCACAGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 32695 264 + 40826 AAACTGCCTCTTCTCCTTCCAGGT---CTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCCCACAGGAGAGAACATGACCTTGTCCTGCAGTTCCCGGCGCTCCTTTGACATGTACCATCTATCCAGGGAGGGGGAGGCTCACGAACTTAGGCTCCCTGC------------AGTGCCGAGCGTCAATGGAACATTCCAGGCTGACTTCCCTCTGGGCCCTGCCA------CCCACGGAGGGAACTACAGATGCTTCGGCTCTCTCCGTGAC i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47747055 264 + 51301725 AAACTGCCTCTTCTCCTTCCAGGT---CTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCCCACAGGAGAGAACATGACCTTGTCCTGCAGTTCCCGGCACTCCTTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCCATGAACTTAGGCTCCCTGC------------AGTGCCAAGCGTCAATGGAACATTCCAGGCTGACTTCCCTCTGGGCCCTGCCA------CCCATGGAGGGAACTACAGATGCTTCGGCTCTCTCCGTGAC i papAnu2.chr19 C 0 T 49314 s chlSab2.chr6 47426124 264 + 50890351 AAACTGCCTCTTCTCCTTCCAGGT---CTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCCCGCAGGAGAGAACATGACCTTGTCCTGCAGTTCCTGGCGCTCCTTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCCATGAACTTAGGCTCCCTGC------------AGTGCCGAGCATCAATGGAACATTCCAGGCTGACTTCCCTCTGGGCCCTGCCA------CCCACGGAGGGAACTACAGATGCTTCGGCTCTCTCCATGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772360 270 + 49145316 AATCAGCCTCTTTTCCTCCCAGGA---AAACACAAAAAGCCTTCTCTCTCCACCCAGGAGGACCCCAGGATGGGGAGTGGAGAGAACGTGACGTTATTCTGCATCTCTGAAATCTCATTTGACCGGTACCATCTGTGGAGAGAGGGGGCTCCTTATGGCCAGTGGCTCAGTGG------------AGGTCAGGGACACAGGGGAGCATTCCAGGCCAACTTTTCTGTGGGCCTCGCAACGCCAGCCCATGGAGGGACCTATAGATGCTACGGTTCTTTCAATGCC i calJac3.chr22 I 638 C 0 s canFam3.chr1 19893898 272 - 122678785 -ACCTACCCTTCCTCTCTCTAGGACAGCTCTCCTATACACCCTCCTTACGGGTGCATCCAGGACCCACGGTGGCCCCAGGAGAGAATGTGACCCTGCTGTGTCAGTCACTGAGCAATGTGGACACATTCCTTCTGTCCAAGGATGGGGCAGCTGAT-------GCCTCCTTGCGTCTTAGATCGAAGTACCGAGC-----TGGGAAGTACGAGGCTGAATTCTCCATGAGTCCTGTGACCCCAGCCCATGGGGGGACCTACAGGTGCTACGGCTCTATCAAAACC i canFam3.chr1 C 0 C 0 a score=159550.000000 s hg38.chr19_GL949747v2_alt 424054 99 + 729520 TCTCCCTACGAGTGGTCAGACCCGAGTGACCCACTGCCTGTTTCTGTCACAGGTGAGGAAAGCCAATGTCTGTC----CCATGTCCTA----T---------GGTCCTAGAGCCTT s panTro4.chr19 59661995 99 + 63644993 TCTCCGTACGAGTGGTCAAAGTCAAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAGAGCCCATGCCTGTC----CCATGTCCTA----T---------GATCCTAGAGCCTT i panTro4.chr19 T 94754 C 0 s ponAbe2.chr19 56673017 99 + 60714840 TCTCCCTAAGAGTGGTCAGACCCGAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAAAGCCCATGTCTGTC----CCATGTCTTC----T---------GATCCTAAAGCCAT i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 32959 99 + 40826 TCTCCCTACGAGTGGTCAGACCCGAGTGACCCACTGCCCGTTTCTGTCACAGGTGAGGAAACCCCATGTCTGTC----CCATGTCTTA----T---------GATCCCAGAGCCAT i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47698005 99 + 51301725 CTGCCCTATGTGTGGTCACACCCGAGTGACCCACTGCCCATTTCtgtcacaggtgaggaaaccccATGCCTGTC----CCACGTCTTG----T---------AATCCTAGAGCCAT i papAnu2.chr19 T 49314 C 0 s chlSab2.chr6 47426388 99 + 50890351 TCTCCCTATGAGTGGTCAGACCCGAGTGACCCACTGCCCGTTTCTGTCACAGGTGAGGAAACCCCATGTCTGTC----CCATGTCTTA----T---------GATCCCAGAGCCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772630 106 + 49145316 TCCCCCTATGAGTGGTCGGCCCCCAGTGAGCCCCTGCACCTTTCTGTCACAGGTGAGGAG--CCCACACCTGCC----ACCTGTCCTG----TTGTCCACTAAGTCCCAGAGCCAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19894170 107 - 122678785 TCTCCCTACCTGTTGTCATACCCCAGTGTCCCCGTGGAGATCCTGGTCTCAGGTGAGTAGCCCTTGCCCCTGTCCCCTCCATGTGCTAACATT---------GTTCTCAGGGCCCT i canFam3.chr1 C 0 N 0 a score=136719.000000 s hg38.chr19_GL949747v2_alt 424153 121 + 729520 -AGCTGAGGAGCTTCCTGCTGA------------------------TGATGGAGAGAAGCATGGACAGATGTGGAG--AGAAGATGC--AGCAT-GGTGTGAGGGTGGGATCAGGGCACAGGATGGCAGACAGGGCACCTCCAAACCCTCC s panTro4.chr19 59662094 122 + 63644993 -AGCTGAGGAGCTTCCTGCTGA------------------------TGATGGAGAGAAGGATGAACAGATGCAGAG--AGAAGACGA--AGCTTGGGTGTGAGGGAGACATCAGGGCACAGGATGGCAGACAGGGCAGCTCCAAACCCTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56673116 121 + 60714840 -AGCTGAGGAGCTTCCTGCTGA------------------------TGATGGAAAGAAGGATGAACAGATGCAGAG--AGAAGACGA--AGCCTGGGTGTGAGGGCGGGATCAGGGTGCACGATGGCAGACA-AGCACCTCCAAACCCTCC i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 33058 121 + 40826 -AGCTGGGGAGCTTCCTGCTGA------------------------TGATGGAGAGAGGGATGGACAGATGCAGAG--AGAAGATGA--AGCCTCGGTGTGAGGTTGGGGTCAGGGCACAGGAGGGCAGACACAGCACAT-CAAACCCTCC i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47698104 122 + 51301725 -AGCTGAGGAACTTCCTTTTGA------------------------TGATGGAGAGAAGCGTGGACAGATGCAGAG--AGAAGACAA--AGCCTGGGTGTGAGGGTGGGGTCAGGGCACAGGATGGCAGACAGGGCACCTCCAAACCCTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47426487 121 + 50890351 -AGCTGGGGAGCTTCCTGCTGA------------------------TGATGGAGAGAGGGATGGACAGATGCAGAG--AGAAGACGA--AGCCTCGGTGTGAGGTTGGGGTCAGGGCATAGGAGGACAGACACAGCACAT-CAAACCCTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772736 146 + 49145316 -ACCAGAGGGGCATCCCACTGGGCACACAGGGGCATTAGGTATTCTGGACAAAATGAAGCAGTGAAAAATACAGAC--AG-GGATGAACAGGCTGAGTGGGATGGGGCTGTCAGGGTGCAGGGC-ATAGACAGGGCAGCTCTGCGCCCTCC i calJac3.chr22 C 0 I 11 s canFam3.chr1 19679120 125 - 122678785 AACTCGGGGACCTGCCCATAGG----------------GCAGTGCTAGCCTGGGATGGGAGTGAGGGGTCACAGAATTAGGAGATCA----------TCCAGAGGGGACCTCAGCTCTCAGGGGGATAGTCAGGACAACACCATCCCTGAC i canFam3.chr1 N 0 C 0 a score=15842.000000 s hg38.chr19_GL949747v2_alt 424274 20 + 729520 TGCATGGCCTGCATGGAAGC- s panTro4.chr19 59662216 20 + 63644993 TACACGGACTGCATGGAGGC- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56673237 20 + 60714840 TGCATGGCCTGCATGGAGGC- i ponAbe2.chr19 C 0 I 11 s rheMac3.chrUn_JH290802 33179 20 + 40826 CGCACTGCCTGCATGGAGGC- i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47698226 20 + 51301725 TTCACAGCCCACATGGAGGC- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47426608 20 + 50890351 TGCATGGCCAGCGTGGTGGT- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19679245 21 - 122678785 TTCTCCCCTTCCCTTGAGGCC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45772882 11 + 49145316 I a score=7043.000000 s hg38.chr19_GL949747v2_alt 424294 13 + 729520 TTGCAGTAAGGGC s panTro4.chr19 59662236 13 + 63644993 CTGCGGCCAGGGC i panTro4.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 33199 13 + 40826 CTGTGGTCAGGGC i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47698246 13 + 51301725 CCGCGTTCAGGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47426628 13 + 50890351 CCGCAGTCAGGGC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19679266 9 - 122678785 CTGTAGTGA---- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56673257 11 + 60714840 I e calJac3.chr22 45772882 11 + 49145316 I a score=19532.000000 s hg38.chr19_GL949747v2_alt 424307 17 + 729520 TCCGGGTACCCAGGCAG s panTro4.chr19 59662249 17 + 63644993 TCCAGGCACCCAGGCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56673268 17 + 60714840 TCCAGGCACCCAGGCAG i ponAbe2.chr19 I 11 C 0 s rheMac3.chrUn_JH290802 33212 17 + 40826 TTCAGGCACCCAGGCAG i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47698259 17 + 51301725 TGTCAGCACCCAGGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47426641 17 + 50890351 TCCAGGCACCCAGGCAG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19679275 16 - 122678785 -CAGGGGAGTGATGTAG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45772882 11 + 49145316 I a score=65198.000000 s hg38.chr19_GL949747v2_alt 424324 52 + 729520 -ATGGAGAAAGTGGTCAGGACAGACCCAGAGG-AGG-GAGACTGGGCTCAGTTTG s panTro4.chr19 59662266 52 + 63644993 -ATGGAGAAAGTGGTCAGAAGAGACCCAGAGG-AGG-GAGACTGGGCTCAGTTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56673285 51 + 60714840 -ATGGAGAAACTTATCAG-ACAGACCCAGAGA-AGG-GAGACTGGGCTCAGTTTG i ponAbe2.chr19 C 0 T 78945 s rheMac3.chrUn_JH290802 33229 53 + 40826 -ATGGAGAAACTGGTCAGGACAGACCCAGAGGAAGG-GAGATTGGGCTCAGTTTG i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47698276 53 + 51301725 -ATGGAGAAAGCTGTCAGGACAGACCCAGAGGTGGG-GAGACTGGGCTCAGTTTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47426658 52 + 50890351 -ATGGAGAAACTGGTCAGGACAGACCCAGAGG-AGG-GAGACTGGGCTCAGTTTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772893 54 + 49145316 -ATGAAGAAAGAGGTCAGGGCAAACACAGGTGGAGGTGAGGCCAGATGGAGTTTG i calJac3.chr22 I 11 C 0 s canFam3.chr1 19679291 31 - 122678785 ACTGGAGAGGAC--TCAGGGCTGAC----AGA-AGG-GA---------------- i canFam3.chr1 C 0 C 0 a score=81023.000000 s hg38.chr19_GL949747v2_alt 424376 47 + 729520 GGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCATTTCCCAG------ s panTro4.chr19 59662318 47 + 63644993 GGAAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCATTTCCCAG------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594391 47 + 60714840 GGGAGATCAAAGGTTCCCTCAGCCCCTCAACCTTACCCGTTTCCCAG------ i ponAbe2.chr19 T 78945 I 79256 s rheMac3.chrUn_JH290802 33282 47 + 40826 GGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCATTTCCCAG------ i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47698329 47 + 51301725 GGGAGATCTGAGGTTCCCTCAGCCCCTCAACCTTACTCATTTCCCAG------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47426710 47 + 50890351 GGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCATTTCCCAG------ i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772947 47 + 49145316 TTGAGATCAGAGGTTGCCTCAGCCCCTCGCCCTTTTCCATTTTCTCC------ i calJac3.chr22 C 0 I 1 s canFam3.chr1 19679322 50 - 122678785 AGAAGGCCAGAGGCCCTTCCCG---CTCATTCTCCTCCAGTCTCCAGTCCTAG i canFam3.chr1 C 0 C 0 a score=58730.000000 s hg38.chr19_GL949747v2_alt 424423 36 + 729520 AAGCCCACCCTGGCCTCTCACCTACACAGAGATGTC s panTro4.chr19 59662365 36 + 63644993 AAGCCCATCCTGGCCTCTCACCCACACAGAGATGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56673694 36 + 60714840 AAGCCCATCCTGGCCTCTCACCCACAGAGAGATGTC i ponAbe2.chr19 I 79256 C 0 s rheMac3.chrUn_JH290802 33329 36 + 40826 AAGCCCATCCCGGCCTCTCATCCACAGAGAGATGTC i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47698376 36 + 51301725 AAGCCCATCCCGGCCTCTCACCCACAGAGAGATGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47426757 36 + 50890351 AAGCCCATCCTGGCCTCTCACCCACAGAGAGATGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772995 35 + 49145316 AAGCCCCTCCTGACCCCTCA-CCACAGAGAGATTTC i calJac3.chr22 I 1 I 20261 s canFam3.chr1 19679372 22 - 122678785 ----------GAGCCGCTCCTCC----GGAGACACC i canFam3.chr1 C 0 C 0 a score=14760.000000 s hg38.chr19_GL949747v2_alt 424459 8 + 729520 ATCACCAG s panTro4.chr19 59662401 8 + 63644993 ATCACCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56673730 8 + 60714840 ATCACCAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 33365 8 + 40826 ATCACCAG i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47698412 8 + 51301725 ATCACCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47426793 8 + 50890351 ATCACCAG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19679394 8 - 122678785 AACACCAG i canFam3.chr1 C 0 N 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=82609.000000 s hg38.chr19_GL949747v2_alt 424467 85 + 729520 CAACCCCTACACTT-TTTCTTTTCCTTTGAAAAAATGCTGattgaggttaaatatacctatataatttatcaactttaccattttt s panTro4.chr19 59662409 85 + 63644993 CAACCCCTACACCC-TTTACTTTTGTTTGAAGAAATATTTATTGAGGATAAATATACCTATATAGTTTACCACCTTTAACAttttt i panTro4.chr19 C 0 I 94752 s ponAbe2.chr19 56673738 85 + 60714840 CAACCCCTACACCCTTTTCTTTTCCTTCGAAAAAATGCTGATTGAGGTTAAATGTACCTATATAATTTACCAACTTTACCATTTT- i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 33373 86 + 40826 CAACCCTTACACCCTTTTCTTTTCATTTGAAAAAATGCTGattgaggttaaatatacctgtataatttaccaatgttaccatttta i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47698420 86 + 51301725 CAATCCCTAcacccttttcttttcatttggaaaagtatttattgaggTGGAATATACCTATATAATTTACCtcctttaccattttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47426801 80 + 50890351 CAACCCTTACACCCTTTTCTTTTCATTTGAAAAAATGCTGATTGAGGT------TACCTGTATAATTTACCAACGTTACCATTTTT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=42675.000000 s hg38.chr19_GL949747v2_alt 424552 41 + 729520 aagtgtaaaatctagggatcataaatacctttataTgctgt s panTro4.chr19 59757246 41 + 63644993 AAGTGTAAAATCTAGGGATCATAAATACCTTTATATgctgt i panTro4.chr19 I 94752 C 0 s ponAbe2.chr19 56673823 41 + 60714840 ATGTGTAAAATTTAGGGATCATAAATACCTTTATATgctgt i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 33459 41 + 40826 aagtgtaaaatctaggggtcataaatacctatacaggccgg i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47698506 41 + 51301725 aagtgtgaagTCTACTGttcataaatacatttataggctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47426881 41 + 50890351 AAGTGTAAAATCTAGGGGTCATAAATACCTATATAggccgg i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=885134.000000 s hg38.chr19_GL949747v2_alt 424593 586 + 729520 gtgcggtggctcacgcctgtaatctcagcattttgagacgccaaggcaggtggatcatttaaaatcaggggctggagaccagcccggccaacatggggg-aaccaatctttactaaaaagac-aaaaa----aaataaaattagccaggcatggtgccaggcgcctataatcccagcaacttgggaggctgaggcgggagagtggcttaaacccaggaggaggaggttgcagtgagctgagatcatgccactgcactgcagcctggtgacaca--gagagactctgtctctaaataaataaataaaTACTTTTATA---------TTctt-cttttgttaccctccaccccttccttcctaacctctggtatccaccattctactctctaccttcatgaggtccaccttttacatcctgcatgtgagtaagaaatggcaatccttgtaatgacctccag-tccatccatgtggctgcaaatgacaggacgtttctctttgtatggatgagttgtctccattgtgtgtatgtactacattctctctatccattcatccactgatgggcaggtaggttgactccacatcttggctactgtgaacagt s panTro4.chr19 59757287 585 + 63644993 gtgcggtggctcacgcctgtaatctcagcattttgagatgccaaggcaggtggatcatttaaaatcaggtgctggagaccagcctggccaacagggggg-aaccaatctttactaaaaagac--aaaa----aaataaaattagccagacatggtgccgggcgcctataatcccagcgacttgggaggctgaggcgggagagcggcttaaacccaggaggaggaggttgcagtgagctgagatcatgccactgcactgcagcctggtgacaca--gagagactctgtctctaaataaacaaataaaTACTTTTATA---------TTctt-cttttgttaccctccaccccttccttcctaacctctggtatccaccattctaatctctaccttcatgaggtccaccttttacatcctgcatgtgagtaagaaatggcaatccttgtaatgacctccag-tccatccatgtggctgcaaatgacaggacgttactctttctatggatgagttgtctccattgtgtgtatgtactacattctctctatccattcatccactgatgggcaggtgggttgactccacatcttggctactgtgaacagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56673864 586 + 60714840 gtgtggtggctcacgcctgtaatctcagcattttgagacgccaaggcaggtggatcatttaaaatcagggcctggagaccagcctggcctacatggggg-aacccatctttactaaaaagacaaaaaa----aaaaaaaattagccaggcatggtgccatgggcctataatcccagctacttgggaggctgaggcaggagagccgcttaaacccaggaggcggaggttgcagtgagctgagatcatgccactgcactgcagcctggtgacaca--gagagactctgtctctaaatgaataaataaaTACATGTATG---------TTATt--ttttgttaccctccaccccttccttcctaacctctggtatccaccattctactctctaccttcatgaggtccaccttttacatcctgcatgtgggtgagaaatggcaatccttgtaatgacctccag-tccatccatatggctgtaaatgacaggatgttactctttctatggaggagttgtctccattgtgtgtgtgtaccacattctgtctatccattcatccactgatgggcaggtaggttgactccacatcttggctactgtgaacagt i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 33500 584 + 40826 atgcagtggctcacacctgtaatctcagcaatttgagaggccaaggtaggtagatcattcaaaatcaggggctggagaccagcctggccaacatgggggaaacccatctttactaaaaagat--gaaa-------aaaaattaaccaggcatagtaccacatgcctgtaatcccagctacttgggaggctgaggcaggagaactgcttaagcccaggaggcagaggttgcagtgagccgagatcatgccactgcactgcagcctggtgaaaca---agagactctgtctctaaatagataaataaataaaTTTATA---------TTcttttttttgttaccctccatcctttccttcctaacctctggcatccaccattctactctctaccttcatgagcttcaccttttacatcctgcaggttagtgagaaatggcaatccttgtaatgacctccagttccacccatgtggctgcaaatgtcagtatgttattgtctctatggatgagtagtctccaccgtgtggatgtactacattctctctatccattcacccactgaggggcaggtaggttgactccacatcttggctactgtgaatggt i rheMac3.chrUn_JH290802 C 0 C 0 s macFas5.chr19 55627193 600 + 59248254 gcacggtggctcacggttgtaatcccaacactttgagaggccaaggcaggtggatcatttgagatcagggactcaagaccaccctggccaacgtggggaaaatccatctgtactaaaaatac--aaaataataataataattagccgagcatggtggcacatgcctgtagtcccaactacttgggagggttaggcaggagatgcacttagttgcaggaggcacaggttgcagtgagccgagatcatgccactgcactgcagcctgg-gagacagacagagacactctctcaaaaTTAATTAATTAATTAATtagtacttttt--tttttttttttttttaccctccacccttcccttcctggcctctggtagccaccattctactctctactttcatgagatccaccttttagctcctgcatatgagtaagaaatggaaatacttgtaatgacctccagttccatccatgtggctgcaaatgtcaggatgttattgtttctatggatgagtagtctccagtgtgtgtatgtactacattctctctatccattcacccactgaggggcaggtaggttgactccacatcttggctactgtgaactgt i macFas5.chr19 N 0 T 6660 s papAnu2.chr19 47698547 601 + 51301725 gcacagtggctcacggttgtaatcccaacactttgagaggccaaggcaggtggatcatttgagatcagggactcaagaccaccctggccaacgtggggaaaatccatctgtactaaaaatac--aaaataataataataattagccgagcatggtggcacatgcctgtagtcccagctacttggaagggttAGGCAGGAGATGCACTTAGTtgcaggaggcacaggttgcagtgagccaagatcatgccactgcactgcagcctgg-gagacagagagagacactctctcaaaattaattaattaattaattaggttttttttgttgttttttttttttaccctccacccttcccttcctgggctctggtagccaccattctactctctactttcaTGAGATCCACCTTTTAGCTCCTGCATATGagtaagaaatggaaataattgtaatgacctccagttccatccatgtggctgcaaatgTCAGGATGTT-TTGTTTCTATGGATGAGTAGTCTCCACTGTGTGTATGTACTACATTCTCtctatccattcacccactgagGGGCAGGTAGGTTGACTCCacatcttggctactgtgaactgT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47426922 585 + 50890351 gtgcagtggctcatgcttgtaatctcagcaatttgagaggccaaggcaggtagatcattcaaaatcaggggctggagacaagcctggccaacatgggggaaacccatctttactaaaaagat--gaaa-------aaaaattaaccaggcatagtgccacgtgcctgtaatcccagctacttgggaggctgaggcagcagaaccgcttaagcccaggaggcagaggttgcagtgagccgagatcatgcctctgcactgcaacctggtgacaca--cagagactctgtctctaaatagataaataaataaaTTTGTA---------TTcttttttttgttaccctccatcctttccttcctaacctctggcatccaccattctactctctaccttcatgagcttcaccttttatatcctgcaggttagtgagaaatggcaatccttgtaatgacctccagttccacccatgtggttgcaaatgtcaggatgttactgtctctatggatgagtagtctccactgtgtgtatgtactacattctctctatccattcacccactgatggacaggtaggttgactccacatcttggctactgtgaatggt i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=580752.000000 s hg38.chr19_GL949747v2_alt 425179 503 + 729520 gctggaacagtcatgggagtgcagatgtcacttcaatacactgaagtccttttctttgcatttacacccactagtggaattgctagatcctctggatgttctctttttaggttttgttttatgctttttgttttttt---gacatagcgtttcactcttgttgcccaagctggagtgcaatggcaccacctgggctcactgcaacctctacctccaggattcaagtgattctccagcctcagcctcccgagtagttgggattactggtgcccgccaccacgcctggctgatttttgtatttttagtagagacggggtttcaccatgttagccaggctggtctcgaactcttgacctccagtgatctgcccacttcagcctcccaaggtgctgggattacaagcgtgagccacagtgcctaatctctttttagtttttaaggaacttccatattcttctcctctgtaatggctgtattaatttacattcctatcaacagtgtatcag s panTro4.chr19 59757872 503 + 63644993 gctggaacagtcatgggagtgcagatgtcacttcaatacactgaagtccttttctttgcgtttacacccactagtggaattgctagatcctctggatgttctctttttaggttttgttttatgctttttgttttttt---gacatagcgtttcactcttgttgcccaagctggagtgcaatggcaccatctgggctcactgcaacctctacctccaggattcaagcgattctccagcctcagcctcccgagtagttgggattactggtgcctgccaccacgcctggctgatttttgtatttttagtacagatggggtttcaccatgttagccaggctggtctcgaactcttgacctccagtgatctgcccacttcagcctcccaacgtgctgggattacaagcgtgagccacagtgcctaacctctttttagtttttgaggaacttccgtattcttctcctttgtaatggctgtattaatttacattcctatcaacagtgtatcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56674450 503 + 60714840 gctggaacactcatgggagtgcagatgtcacttcaacacactgaagtccttttctttgcatttacacccactagtggaattgctagatcctctggacgttctctttttaggttttgttttatgctttttgttttttt---gacatggcgtttcactcttgttgcccaagctggagtgcaatggcaccatctgagctcactgcaacctctacctccaggattcaagcgatcctccagcctcagcctcctgaggagttgggattactggcgcccgccaccacgcctggctgatttttgtatttttagtagagacggggtttcaccgtgttagccaggctggtctcgaactcccaacctccagtgatctgcccacttcagcctcccaaggtgctgggattacaagcgtgagccacagtgcctaacctctttttagtttttgaggaacttccatattcttttcctctgtaatggctgtattaatttacattcctatcaacagtgtatcaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 34084 501 + 40826 gctagaacagtcatgggagtgcagatgtcactttgataca-tgaagtcctttcctttgcatttgcacccactagtggaattgctagatcctctggaagttctctttttaggttttggtttatgctttttgttttttt---gacaagaagtttcactcttgttgcccaggctggggtgtaatggcaccatctgggatcactgcaacctctacctccaggattcaagtgattctcctgcctcagcctcctgagtagttg-gattactggcgcctgccaccacacccgcctaatttttgtatttttagtagatacgggttttcaccatgttggccaggctggtctcaaactcttggcatcgagtgatccacccacttcagcctcccaaggtgctgggattacaagggtgagctgcagcacccagcctctttttattttttgaggaacttccatattcttctcctctgtgaaagttgtactaatttatattcctgtcaacagtgtatcag i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47699148 498 + 51301725 GCTAGAACAGTCATGGGAGTGCAGCTATCACTTCGATACACTGAAGTCCTTTCCTTTTGGTTTACACCCAGTCGTAGAATTGCTAGATCCTGTGCAAGTTGACtttttacgttttgttttatggtttttgtttttttttagaca--gagtttcattcttgttgcccaggctggagtgccgtggtgccatctgggctcactgcaacttgcacCTCCGGGATTCAAGAGATTccctagcctcagcctcccaagtagctgagattactggctcccaccaccacactcagctaa------tatttttagtagagacggggtttctctatattggccaggctgctcttcaactcttgacctcaagtgatctacccacctcggcctcccaatgtgctgggattacaggcatgaaccaccgtgcccaacctcgttttattttttgaggaacttccatactctTCTCCTCtgtaatggctgtattaatttacattcataTCAACAGTGTACCAG i papAnu2.chr19 C 0 I 192 s chlSab2.chr6 47427507 501 + 50890351 gctagaatagtcatgggagtgcagatgtcactttgataca-tgaagtcctttcctttgcatttacacccactagtggaattgctagatcctctggaagttcattttttaggttttggtttatgctttttgttttttt---gacatgaagtttcactcttgttgcccaggctggggtgtaatggcaccatctgggctcactgcaacctctacctccaggattcaagtgattctcctgcctcagcctcctgagtagctg-gattactggcacctgccaccacacctggctaatttttctatttttagtagatatggattttcaccatgttggccaggctggtctcgaactcctggcctccagtgatctgcccacttcagcctcccaaggtgctgggattacaagggtgagctgcagcacccagcctctttttattttttgaggaacttccatattcttctcctctgtgaaagttgtactaatttatattcctgtcaacagtgtatcgg i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55627793 6660 + 59248254 T a score=1000.000000 s hg38.chr19_GL949747v2_alt 425682 1 + 729520 g s panTro4.chr19 59758375 1 + 63644993 g i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56674953 1 + 60714840 g i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 34585 1 + 40826 g i rheMac3.chrUn_JH290802 C 0 C 0 s chlSab2.chr6 47428008 1 + 50890351 g i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e papAnu2.chr19 47699646 192 + 51301725 I e macFas5.chr19 55627793 6660 + 59248254 T a score=779057.000000 s hg38.chr19_GL949747v2_alt 425683 677 + 729520 gttctcctttctccaccaccttgccaacatttgttttgtctgtctctgagat-aaaacccattgtaatggggtgagatgatagctcattgtgacttca-tttgcatttctctgatgattagtgatactgagcactttttcatatatgcaatgtatatatgttcatttgtatgttttgttcattgagaaatgtctgttcaggtcttttactaattttataattaaattattagttttattgaggtgtttgagcttcttttatattctagttattaatcccatctcagatgcatagtttgcaaatatttgctcccattctgtgggttgtctcttcttcacttcattggttgcttcctttgcggtgcagaagctgcttgatttgatataatcccaatggtcta-tttttttgttgttgttgtgattacttgtgtttttgaggtttt-----aaacaaaatgtcttccctcagacaaatgtcctggagcatttctccagtgtttccttttagacatttaatggattcaggtcttaagtcattaatccattttcatctgatttttgtgtatggtgagaggtagaggtgcagtttcatccctctgcatgtagatatccagttttccctgcaccatttattgaaatgactgtcctttccagattgtagattcttcgaacctttgtcaaagtc s panTro4.chr19 59758376 682 + 63644993 gttctcctttctccaccaccttgccaacatttgttttgtctgtctctgagat-aaaacccattgtaatggggtgagatgatagctcattgtgacttca-tttgcatttctctgatgattagtgatactgagcactttttcatatatgcaaggtatatatgttcatttgtatgttttgttcattgagaaatgtctgttcaggtcctttactaattttgtaattaaattattagttttattgaggtgtttgagcttcttttatattctagttactaatcccctctcagatgcatagtttgcaaatatttgctcccattctgtgggttgtctcttcttcactttgttggttgcttcctttgcggtgcagaagctgcttaatttgatataatcccaatggtcta-ttttgttgttgttgttgtgattacttgtgtttttgaggttttaaataaaataaaatgtcttccctcagacaaatgtcctggagcatttctccagtgtttccttttagacgtttaatggattcaggtcttaagtcattaatccattttcatttgatttttgtgtatggtgagaggtagaggtgcagtttcatccctctgcatgtagatatccagttttccctgcaccatttattgaaatgactgtcctttccagattgtagattcttcgaacctttgtcaaagtc i panTro4.chr19 C 0 T 94143 s ponAbe2.chr19 56674954 666 + 60714840 gttctcctttctccaccaccttgccaacatttgttttgtctgtctttgagat-aaaagccattgtagtggggtgagatgatagctcattgtgacttca-tttgcatttctctgatgattagtgatactgagcactttttcatatatgca--------atgttcatttgtatgttttgctcattgagaaatgtctgttcagctcttttactaattttataattaaattattagttttattgaggtgtttgagcttcttttatattctagtttttcatcccctttcagatgcgtagtttgcaaataattgctctcatcctgtggcttgtc---tcttcgctttgttgcttgcttcctttgcagcgcagaagctgcttagtttcatataatcccaatggtcta-tttttttgttgttgttccaattacttgtgtttttgaggtttt-----aaacagaatgtcttccctcagacaaatgtcctggagcatttccccagtgtttccttttagacgtttaatgggttcaggttttaagtcattaatccattttcatctgatttttgtgtatggtgagaggtagaggtgcagtttcatccctctgcatgtagatatccagttttccctgcaccatttattgaaatgactgtcctttccagattgtagattcttggaacctttgtcaaagtc i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 34586 663 + 40826 gttctcgtttctccaccaccttgtcagcatttgttttgtctgtctttgagat-aaaagccattgtaatggggtgcgatgatagctcattgtgatttca-tttgcatttctctgatgattagtgatactgagca-cttttcatatatgca--------atgttcatttgtatgttttgttcattgagaaatgtctgttcaggtcttttactaattttataattaaattagtaattttattgaggtgtttgagcttcttttatattctagttcttaatcccctctcagatgcatagtttgcaaatatttgctcccattccatgggttgtctcttcttcactttgttggttggttcctttgcagtgcagaagctgcttagtttgatataatcccaatggtcta-tgtttttg----tgttctgattacttgtgtttttgagg-ttt-----aaacaaaatgtcttccctcagacaaatgtcctggagcatttccccagtgtttccttttagatgtttaatgggttcaggccttaagttgttaacccattttcatttgatttttgtatatggtgagaggtagaggtgcattttcatccctctgcatgtagctatccagttttccctgcatcatttattgaaaccactgtcctttccagattgtagattcttggaacctttctcaaagtc i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47699838 647 + 51301725 GCTCTCCTTTCTCTACCACCTTACCAGCATTTGTTTTGTCTGTCTTTCTGATAAAAAGCCATTGTAATGGGGTGAGATGATAGCTCACTGTGAAttcagtttgcatttctctgattagt--tgatactgagcattttttcatatatacg--------ATGTCCATTTGCATGTTTTGTTcattgagaaatgtctgttcagatcttttattaattttataattaaattatttgtttaattgaggtgtttgagcttcttatatattctagttgTTAATCCCCTC-CAAgtgcatattttgcaaat----------attctgtgagttgtc---tcttcactttgtttgtTGCTTCCTTTGCGGTGCAGAAGCTgcttagtttgatgtaatcccaatcgtcta-----tttt----tgttttgattgtttgtgtttttgaggtttt-----AAACAAAATGTCTTTCTTCAGACAAATGTCCTGgagcatttccccaatgtttccTCTTAAATGTTTGATGGGTTTAGGccttaagtctttaattcattttcatttgatttttgtgtatggtgagagtcAGAGGTGCAGTTTCATCCCTCTGCATGTAGATATACAgttttccctgcaccatttattgaaatgacAGTCTCTTCCTGATTTTAGACCTTTAGAACCTTTGTCAAATTC i papAnu2.chr19 I 192 C 0 s chlSab2.chr6 47428009 663 + 50890351 gttctcgtttcttcacca-cttgtcagcatttgttttgtctgtctttgagat-aaaagccattgtaatggggtgcgatgatagctcattgtgatttca-tttgcatttctctgatgattagtgatactgagca-cttttcttatacgca--------atgttcatttgtatgttttgttcattgagaaatgtctgttcaggtcttttactaattttataattaaattattaattttgttgaggtgtttgagcttcttttatattctagttcttaatcccctctcagatgcatagtttgcaaatatttgctcccattccatgggttgtctcttcttcactttgttggttggctcctttgcagtgcagaagctgcttagtttgatataatcccaatggcctaatttttttg----tgttctgattacttgtgtttttgagg-ttt-----aaacaaaatgtcttccctcagacaaatgtcctggagcatttccccagtgtttccttttagatgtttaatgggttcaggccttaagtcgttaatccattttcatttgatttttgtatatggtgagaggtagaggtgcagtttcatccctctgcatgtagctatccagttttccctgcatcatttattgaaaccactgttctttccagattgtagattcttggaacctttctcaaagtc i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55627793 6660 + 59248254 T a score=1406947.000000 s hg38.chr19_GL949747v2_alt 426360 1288 + 729520 cattggatgtaaatgggtggattacatccgtgttcttcattctgctccattgttttatgtgcttttctttatgccaatgtcatgttgttttgcttactacagctctgtaacatatttttaagtcaggtagtgtgatgctcctgttttctccttATACCTTGAAGTCTCAAGATAGTTGGTGTCACCTACAATGATTATGGAGAATGGGATGCCAGGACTCCCAGGGCCCAACATTAGATAATAGAATG-TTGGCCATGAACCAACCTCAAAGATTTCCATTGAGTAGAAGACAGGCATCCTCATTGCCACACCTCTCTCCTGTCCCATGTTCTAGGAAACCCTTCTAGTAGTTGGCCTTCACCCACTGAACCAAGCTTCAAAACTGG-TAAGTGAAGGACCCCTCTTATCTCTGCTTTTGGAAACCTGGggaggtagaagccttggattcaagcgttggctcagcacctgccagctctgtgattgtgggcctgtcttccattgtctctgaaccccagACACTCCAACAGCGAAAGGGATCTGGGCCCAGCACAGGGCTCAGTGAAATCTCTTAATCTCTAATTTTCTGCTGCTGAGACCT-C----AGGGTAGAAGGATGAGTGCAAATCAGACATTCTTCTCAG---------------GAAAAATGCTGTGTTTGTTCTGCCTGCATTCCTAACTGGGAGGACAAATGCCTGGGGGCTTGAGAAGGGGAAGGACGGGGAACATTTT-TGAGGGTGGTGTATTTGTAGAGAAGTTCTACTTGCCAAGGAATGAGCTCCTGTCTGTCATGATCCAACCCTGGTTGACTTAGTGGAACAAGAGCTTTGCGGTAAGAGAGAACGTAGTTCATCCGTGCACA---TGACACTTCCACTTACTCGTTCAGCCACTGCCCCATGCTCAGACTGTGCAGTGTGGAACCTtttccta-t-gttgccataacaaatttccacaagcttcgtggatggaaaccacatt-ttaaaaaaatatctcatggtgctgtagctcagaagtatgaaatgcatcatctcactgggctaaaatcaaggtgacagcaaggctgccttccctctgaatgttccaggcaagaatctgcttcctcacttttcccagctcctagaggctcccacattccttggctcctggtccccgtcttcctccctcaaagtccacaaaggctggtcacgcctctcacacggcatcactcagacccttcttccttgtccacacctctttctctgaatgctgctctgccttcttcctcatcttttaaggactttggcattctattggaa s panTro4.chr19 59664915 1282 + 63644993 cattggatgtaaatgcatggattatatctgtgttcttcattctgctccgttgttctatgtgcctttccttatgccaacatcatgctgttttgcttactacagctctgtaacatattttgagatcaggtagtgtgatgctcctgtttactctttATACCTTGAAGTCTCAAGACAGTGGGCGTCACATATAAAAATTATGGAAAAAAGGATCCCTGGACTCCCAGGGCACAATATCAGATTACAGAGTG-TTGGCCATGAACCAACCTCAAAAATTTCCATTGAATAGAGGACAGACACTCACATTTCCTCACCTGTCTCCTGTCTCATGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACTGAATCAAGCTCCAAAACCAG-TGAGTACAGAACCC-TCTTATATCTGCTTTTGGAAACCTGGGGAGGTGGAAACCTTGGATTCAGGCATTGAGTCAGCATCTCACAGCTCTGACATTGGGCGCCTGTCTTCCACCATCTCCGAACTCCAGATACTTCAACAGCGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTCATCTCTCATTTTATGGAGCTGAGACCT-CCTACAAGCTAGAAGAATGATCGCCAATCTGACATCTTTCTCAG---------------GAAAAATGCAATGTTTCTTCTGCCTGCATTCCTAACTGG-AGGATAAATTCCTGGGGGCTTGAGAGAGGGAAGGGAAGGGAACATCCGATGAGGGCGAGGTGTTT-TAGAGAAGTTCCACTTGCCAAGGAATGAATTACTGTTGGTCACGAAGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCCGTAACAGAGAACAGAGCTCACGCATGCACACTTTGAC----TCACTGACTCATTCAGCCACGGCCCCATGCTCAGGCTGTGCAGTGTGGAACCTtttccta-ttgttgccataacaaatttccacaagattcgtgggtgaaaacaaaacggttatttaattatcttacagtgctctagctca-aagtacgaagtgcatg---tcactgggctaaaatcaaggtgacagcaaggctgccttccctctgagggttccaggcaagaatctgcttc-tcacttgtcccagcttctaaaggctccca-gttccttggctcctggtccccttcctccttcctcaaagcccacaaaggctggtcaca--tctcacatggcatcactcagacacttcctcctta-ccacacctctttctctgaatgctgctctcccttcttccttatcttttgaaaacttggggattctattgggt i panTro4.chr19 T 94143 C 0 s ponAbe2.chr19 56675620 1285 + 60714840 cattggatgtaaacgggtggattacatctgtgttcttcattctgctccattgtttcatgtgcttttctttacgccaatgtcatgctattttgcttactacagctctgtaacatattttcaagtcaggtagtgtgatgctcctgttttctccttATACCTTGAAGTCTCAAGACAGTTGGTGTCACGTACAATGATTATGGGGAAGGGGATGCCAGGATTACCAGGGCCCAACATTAGATAATAGAATG-TTGGCCATGAACCAACCTCAAAGATTTCCATTGAGTAGAAGACAGGCATCCTCACTGCCACACCTCTCTCCTGTCCCGTGTTCTAGGAAACCCTTCAAGTAGTTGGCCTTCACCCACTGAACCAAGCTTCAAAACTGG-TAAGTGAAGGACCCCTCTTATCTCTGCTTTTGGAAACCTGGggaggcag-agccttggattcaagcgttggctcagcacctgccagctctgtgattgtgggcctgtcttccattgtctc-gaaccccagacactccaacagtgaaaaggATCTGGGCCCAGCACAGGGCTCAGTGAAATCTCTTCATCTCTAATTTTCTTCTGCTGAGACCT-C----AGGGTAAAAGGATGAGTGCAAATCAGACGTTCTTCTCAG---------------GAAAAATGCAGTGTTTGTTCTGCCTGCACTCCTAACCGG-AGGACAAACGCCTGGGGGCTTGACACGGGGAAGGAAGGGGAATATTTT-TGAGGGTGGGGTGTTTGTAGAGAAGTTCTACTTGCCAAGGAATGAGCTCCTGTCTGTCATGATCCAACCCTGGTTGACTTAGCAGAGCAAGAGCTTTGCAGTAAGAGAGAACGTAGTTCATCCACACACA---TGACACTTCCACTCACTCATTCAGCCACTGCCCCATGCTCACACTGTGCAGTGTGGAACCTtttccta-t-gttgccataacaaatttccacaagcttcgtggatggaaaccacatt-tttaaaaaatatctcatggtgctgtagctccgaagtatgaaatgcatcatctcactgggctaaaatcaaggtgacagcaaggctgccttccctctgaaggttccaggcaagaatctgcttcctcacttttcccagctcctagaggctcccacattccttggctcctggtccccgtcttccttcctcaaagtccacaaaggctggtcacgtctctcacacggcatcactcagacccttcttccttgtccacacctctttctctgaatgttgctctgccttcttcctcatcttttaagtacttgggcattctatcggaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 35249 1286 + 40826 cattggatgtaaataggtggattacatctgtgttcttcattctgctccattgttttatgtgcttttctttatgccagtgtcatactgttttgtttactacagctctgtaacatatttttaagtcaggtagtgtgatactcctgttttctccttATACCTTAAAGTCTCAAGATAGTGGGCATCACGTACAATGGTTATGGAGAAGGGGATGCCAGGACTCCCAGGGCCCAATATTAGATAACAGAATG-TTGGCCAGGAACCAACCTCAAAGATGTCCTTTGAGTAGAACACAGGCATCCTTATTTCCACACCTCTCTCCTGTCCCATGTTCTAGGAAACCCTTCAAGTAGTTGGCCTTCACCCACTGAACCAAGCTTCAAAACTGG-TAAGTGAAGGATCCCTCTTACCTCTGCTTTTGAAAACCCGGGGAGGTCgaagccttggattcaagcgttggctcagcacctcccagctctgtgattgtgggcctgtcttccgctgtctctgaaccccagACACTCCAACAACGAAAGGGATCTGAGCCCAGCACAGGGCTCAGTGAAATCTCTTAACCTCTGATTTTCTGCTGCTGAGACCT-C----AGGGTAGAAGGTTGAGTGCAAATCAGACATTGTTCTCGG---------------GATAAATGTGGTGTTTGTTCTGCCTGCATTCCTAACCAA-AGGACAAATGCCTGGGGGCTTGAGAGGGGGAAGGAAGGGGAACATTTT-TGAGGGTGGGGTGTTTGTAGAGAAGTTCTACTTGCCAAGGAATGAGCTCCTGTCTGTCATGATCCAATCTTGGTTGATTTAGCAGAGCAAGAGCCTTGCAGTAAGAGAGAACGGAGTTCATCCACGCACA---TGACACTTCCACTTACTGGCTCAGCCACTGCTCCATGCTCAGGCTGTGCAGTGTGGACCCTtttccta-t-gttgccataacaaatttccacaggcttcgtggatggaagccacatt-tttaaaaaatatctcacggtgctgtagctcagaattatgaaatgcgtcatctcactgggctaaaatcaaggtgacgtcaaggctgacttccctctgaaggttccaggcaagaatctgcttcctcacttttccaagctcctagaggctcccacattccttggcttctggtccccatcttccttcctcaaagcccacaaaggctggtcacatctctcacatgacatcagtcagatccttcttcctca-ccacacctctttctctgaatgttgctctgccttcttcctcatcttttaaagcccttgggattctattggAA i rheMac3.chrUn_JH290802 C 0 T 32169 s papAnu2.chr19 47700485 1286 + 51301725 CATTGGATGTAAATGGGTGGATTACCTCTGTGTTCTTCATTTTGCTCCATTGTTCTATGGGTCTTTCTTTATGCCAAtgtcatgctgttttgcttactacaGCTCTGTAACGTATTtttaagtcaggtagtgtgatgctccTGTTTTCTCCTCATACCTTGAAGTCTCAAGACAGTGAGCATCACATACGATGATTATGGAGAAGGGTACACCAGGACTTCCAGGGCCCAACATTAGATAACAGAATGTTTGGGCATGAACCAACCTTAAAGGTTTCCATTGAGTAGAAGACAGGCATCTTCATTTCCACACCTCTCTCCTGTCCTGTGTTCTAGGAAACTCTTCAAGTACTTGGTCTTCACCCACAGAACCAAGCTCCAACACTGG-TGAGTAAAGAACCCCTCTTGTCTCTGCTTTTGGAAACCTGGAGAGGTGGAAGCCTTGGATTCAAGCGTTAGCTCGGCTCCT------TCTGGGATTGTGGGCCTGTCTTCTGCTGTCTTTGAACTCCAGACACTCCAACAGCACAAGGGATCTGGGGCCAACACAAGGCTCAGTGAAGTGTCTTAATCTCTAATTTTCTGCACCTGAGACCTCC----AAGCTAGAAGGATGAGTGCAAATCTGACatccttctcagaaaaaaaaaaaaaaaaaaaaaagcagtatttttTCTGCCTGCATTCCTAACTGC-AGGATAAATGCCTGGGGGTTTGAGAAAGGGAAGTGAAAAGAACATCTGATGAGGGTGGGATGTTTTTAGGAAAGTTCTACTTGCCAAGGAATGAGCTCCTGTCTCTCATGACGCAACCCTGGTTGACTCAGCAGAGCAAGAAACTTGTAGTAACAgagaatttagttcatttatGCACA---TGA------CACTCACTTGTTCAGCCAATGCCCCATGCTCTGGCTGTGCAGTGTGGAATCTTTTCCTATT-GTTGCCATAACAAATTTCCACAAGCTTTGTGGATGAAAG-CATGTT-TTTCTTAATTATCTCACAGTGCTGTAACTCAGAAGTATGAAATG---CATCTCACTGGGCTGATATCAAAGGCACAGGAAGGCTGAACTTCTTTTTAAGATTCCAAGCAAGAATCTGC-TCCTTACATTTCCCAGTTCCTAAAGACTCCCATGTTCTTTGGCTCCTagtccccttcctccttcctcaaaGCCCATAAAGGCTGGTCACG--TCTCACATGGCATCATTCAAACTGTTATTCTTCACCCACACCTCTTTCTCTGAATGCTACTCTgcctttttcctcatc-tttaaggACTTTGGGATTCTACTGGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47428672 1287 + 50890351 cattggatgtaaataggtggattacatctgtgttcttcattcttctccattgttttatgtgcttttctttatgccaatgtcatactgttttgtttactacagctctgtaacatatttttaagtcaggtagtgtgatactcctgtttcctccttATACCTTAAAGTCTCAAGATAGTGGGCATCACGTACAATGATTATGGAGAAGGGGATGCCAGGACTCCCAGGGCCCAATATTAGATAACAGAATG-TTGGCCAGGAACCAACCTCAGAGATGTCCTTTGAGTAGAACACAGGCATCCTTATTTCCACACCTCTCTCCTGTCCCATGTTCTAGGAAACCCTTCAAGTAGTTGGCCTTCACCCACTGAACCAAGCTTCAAAACTGGTTAAGTGAAGGATCCCTCTTATCTCTGCTTTTGAAAACCCAGGGAGGTggaagccttggattcaagcgttggctcagcacctcccagctctgtgattgtggatctgtcttccgctgtctctgaaccccagacactccaacagtgaaagggatCTGAGCCCAGCACAGGGCTCAGTGAAATCTCTTAACCTCTGATTTTCTGCTGCTGAGACCT-C----AGGGTAGAAGGATGAGTGCAAATCAGACGTTCTTCTCGG---------------GATAAATGTGGTGTTTGTTCTGCCTGCATTCCTAACTGA-AGGACAAATGCCTGGGGACTTGAGAGGGGGAAGGAAGGGGAACATTTT-TCAGGGTGGGGTGTTTGTAAAGAAGTTCTGCTTGCCAAGGAATGAGCTCCTATCTGTCATGATCCAACCCTGGTTGACTTAGCAGAGCAAGAGCCCTGCAGTAAGAGGCAACGGAGTTCATCCACGCACA---TGACACTTCCACTTACTGGCTCAGCCACTGCTCCATGCTCAGGCTGTGCAGTGTGGACCCTtttccta-t-gttgccataacaaatttccacaggcttcgtggatggaagccacatt-ttaaaaaaatatctcacggtgctgtagctcagaattatgaaatgcgtcatctcactgggctaaaatcaaggtgacgtcaaggctgacttccctctgaaggttccaggcaagaatctgcttcctcacttttccaagctcctagaggctcccacattccttggcttctggtccccatcttccttcctcgaagcccacaaaggctggtcacatctctcatataacatcagtcagatccttcttcctta-ccacacctctttctctgaatgttgctctgccttcttcctcatcttttaaaggccttgggattctattggAA i chlSab2.chr6 C 0 T 47452 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55627793 6660 + 59248254 T a score=384122.000000 s hg38.chr19_GL949747v2_alt 427648 324 + 729520 acaccaagat---aatccatcataatttccctaaaatcatctaggataccctccttttaaggttagctgattagcaaccgtaattccatctgcaatctgcattccttttttccatgtaaaataacatattcacaagatatggcgactaggacaggaacattttggggtggggcggcattcttatcctttccacaAATGGTAAACAAGGTGCATTTGGCCTCTGCTCTTGG-ACACTGATATTGCAAAGGATTAAATGGGAGGGCAGAAAATGAATGCACCAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGCATGAGA s panTro4.chr19 59666197 327 + 63644993 tcaccaagatgaaaatccatcataatctcccggaaatcatccaggatactcttgttttaagttcagctgattagcaaccgtaattccatctgcaatcttcattcctccttccc-tgtaaaataacatattcacaagctatggaggctaggacagggacattttggggtgggacagcattctcctgccttccacaAACAGTGAACAAGACGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGACCAATAAGTGAATGATCCACTGGGAAGCATCTGTGCATGAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56676905 323 + 60714840 acgccaagat---aatccatcataatttccctaaaatcatctaggataccctccttttcagtttagctgattagcaaccataattccatctacaatcttcattcctcctttaa-tgtaaaataacatattcacaagatgtggagactgggacatggacattttggggtggagctgcattctcctcctttccacaAATGGTAAACAGGATGCATTTGGCCTCTGCTCTTAGGACCCTGATATTGCAAAGGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGCATGAG- i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 4366 324 + 40826 tcaccaagat---aatccatcataatctccctaaaatcgtctaggataccctccttttcagttcagctgattagcaaccgtaattccatctgtaatcttcattcctcctttca-tgtaaaataatatattcacaagctatggaggctaggacagggacattttggggtggggaagcattcgcctgccttccacaAATGGTAAACAGGGTGCATTCGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAAAACGAGGGCAGAAAATGAATGCACAAGTGGATCAATAAATGAATGATCCATTGGGAAGCATCTGTGCACCAAA i rheMac3.chrUn_JH290802 T 32169 I 16 s papAnu2.chr19 47701771 324 + 51301725 TCACCAAGAT---AATCCATCATAATCTCCCTAAAATCGTCTAGGATACCCTCCTTTTCAgttcagctgattagcaaccatAATTCCATCTGCAATCTTCATTCCTCCtttca-tgtaaaataatatattcacaaGCTATGGAGGCTAGGACAGTGACATTTTGGGGTGGGgcagcattctcctgccttccaCAAATGGTAAACAGGGTGCATTCGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAAAACGAGGGCAGAAAATGAATGCACAAGTGGATCAATAAATGAATGATCCATTGGGAAGCATCTGTGCACCAaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47382507 324 + 50890351 tcatcaagat---aatccatcataatctccctaaaatcatctaggataccctccttttcagttcagctgattagcaaccgtaattccatctgcaatcttcattcctcctttca-tgtaaaatgacatagtcacaagccatggaggctaggacagggacattttggggtggggcagcattctcctgccttccacaAATGGTAAACAGGGTGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAAAACGAGGGCAGAAAATGAATGCACAAGTGGATCCACAAATGAATGATCCATTGGGAAGCATCTGTGCACCAAA i chlSab2.chr6 T 47452 I 24 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55627793 6660 + 59248254 T a score=-113.000000 s hg38.chr19_GL949747v2_alt 427972 16 + 729520 -ATGATTGATTGATTGG s panTro4.chr19 59666524 16 + 63644993 -TCTAttttttgtttgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56677228 13 + 60714840 ----ATTGATTGATTGG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47702095 16 + 51301725 tctgtttttttggttt- i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e chlSab2.chr6 47382831 24 + 50890351 I e macFas5.chr19 55627793 6660 + 59248254 T e rheMac3.chrUn_JH290802 4690 16 + 40826 I a score=5062.000000 s hg38.chr19_GL949747v2_alt 427988 6 + 729520 ttgttt s panTro4.chr19 59666540 6 + 63644993 tcgttt i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 56677241 6 + 60714840 ttgttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 4706 6 + 40826 ttgttt i rheMac3.chrUn_JH290802 I 16 I 2 s papAnu2.chr19 47702111 6 + 51301725 ttgttt i papAnu2.chr19 C 0 I 2 e calJac3.chr22 45773030 20261 + 49145316 I e chlSab2.chr6 47382831 24 + 50890351 I e macFas5.chr19 55627793 6660 + 59248254 T a score=1563371.000000 s hg38.chr19_GL949747v2_alt 427994 1495 + 729520 ttat-gagacggtgtctccctctgtgccccaggctggagtgcagtggcgggatctcggctcaccgcaacctccacctcccaggttaaagcgattctctacactcagcttcccgagaggctgggattacacccatgtcccaccacgcctggctaatttttttttggtattttttttttagtacagacaaggttttaccatgttgcccaggct-atctcaaactcccaaccttaagggatccgcccgtctcagcctcccaaagtgctgagattcgaggcgtgagccaaggcgccgagccGTATTTTAAAAGAAATAATAGATAATGCTgagtgtataatttcgggtgacagagaagttctcactgatcaaataatacttgtgaccttaatgaaaaaaatagatc-aacccctggaagattggcggaaggattttccacaca--gctgtcagccgtgaaggcacaaaggtgaaaacaatgt---tatgtggaaggaagaggctctgcctgaaatg--------------------------------ctgggaatgagatggggagaatgacaagacgactgtggag-agacagagagcACTCTGGGTACACAGGAAACTAAGGAGGAACAAGGAGCGTGTGTTTGACACTCACAGCCATTGGACTTACCTCGGGGCTAACTGGGAATCCCTACATGATGAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCATAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCCGCCCCCCTGGTGAAATGTGGTGCTGATTTAGACACTAAATGAATGAA--AGATGGACACAAGATGTGTTTGTGAGGTAGAGTAATTTGCAGGGAGGGCTTGCCTGCTTTGATTTTTCCTAATTGTTTAATCTTCACTTCATTGATTTCTTTCTGAGATTTA--TTTTTCCTACATGTAAATCAATACTTGGCAGAGGAGTGAGAGATACATGAGGGGTGGTGCAAAGGAAGAGACCTATT---ATAATATAACACACAAGGTTCTGAAcggtggctcacacctgtaacccaacattttgggaggctgaggaggctggatcaagtgagatcaggagttcgagatcagcctggacaacatggtgaaaccccatctctactaaatatacaaaaactagctgggggtggtggcgcatgcctgtaataccag---ctattcgggaagttgaagaaggagaatggcttcaaccagggagggagaggttacagtgagccaagatcgcgtcattgcactgcaccctaggtgacagagtgagactccatggcaaaaaat-aaaaataaagaaTACATAAATATAATATAACATACACGAATGACAAAGGCACACCAATTCCAATCATCATTTTTCTATTTCTCTATA-ATGACTTCTTTGATCCTTTATCCTATCCATAAGAAAATCAGGCGAAAACATCTTCCTTATTTGGCTTTCTGTGAGCATGAGATCATATGGAAAATGTGA----------AACCCACCAGCGCAGGTCCTGGAATAGAGAACGTGA s panTro4.chr19 59666548 1505 + 63644993 ttattgagacagagtctccctctgtcttccaggctacagtgcagtgtcacaatcttggctcactgcaacctgtgtctcctggattcaagtgattctcctgcctcagcctctcgagtagctgggattataggcaactgccaccatgcccggctaattcttttt--gtatatttttt---gtagagaggatgtttcaccatgttggccaagcttgtctgaaactcccaacctcaagtgatccaaccacctcagcatcccaaagtactgggattacaggcgtcagccactgcgcccagccAGAATTCAAAATCAATAATAGATAATGCTgagtgtatgattttgggtgacagagaaggtctcactaaacagata---tttgtgacattaatgaaaaacacggattgaacccctggaagattggcagaaggattttccacacacagctgtcagccgtgaaggcacaaaggtgaaaacaatct---gatgtggaaggaagaggctctgcctgaaatg--------------------------------ctgggaatgagatggggagaatgacaagacgactgtggag-agacggagagcACACTGGGTACACAGGAAACGAAGGAGGAACAAAGGGTGTGTGTTTTATACTCACAGCCATTGGATTCACCTCAGGG-TAACCAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGCGTGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCTGCCCCACTGGTGAAATGTGGTGCTGATTTAGACCCTAAGTGGATGAAGCAGATGGATATAAGCTATGCTTGTGAGGTGGAATCATTGGCTGGAAAGGCTTGCGGGGTATGA-TTTTCCTAGTTGTTTAATCCTCGCTTAATTAATTTCTTTCTGAGATTTA--TTCATCCTACACATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGGGACCTATT---ATAGCATAGCATACAAGTCTGTGAAcggtggctcactcctgtaacccagcactgcaggaggccaaggcgggtggattcgatgaagtcaggagtttcagaccagcctggccaacatggtgaaaccctatctctatgaaaaatacaaaaattagccgagcatggtggtgcatccctgtaatcccagctcctactctggaagatgaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtggagattgcatcactgcactccagcctgggtgacacaaggagactctgtcctaaaaaat-aaaaataagaaaTGCATAAATATAATAAAACACACATGAATGACAAAGGCGCCTGAATTCCAATCATCATTTTTCTATTTCTCTATA-ATTACTTCTTTGATCCTTTATCTCATCCGTTAGGCAATCAGCCTAAAACCTCTTCCCTATTTGGCCTTCTGTGAGCATGAGATCACATAGAAAATGTGAAAGCCCGCTGAATCCTCCAGCACAGATCCTGGAATAGAGAAAGTGC i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 56677247 1493 + 60714840 ttat-gagacagtgtctccctctgtgccccaggctggagtgcagtggcgggatctcggctcactgcagcctccacctcccaggttaaagtgattctcctcactcagcttcccgagaggctgggattacacccatgtcccaccacgcctggctaatttttttttggtatttttttt--agtgcagacaaggttttaccatgttgcccaggct-atctcaaactcccaaccttaagggatccgcccgcctcagcctcccaaagtgctgagattagaggcgtgagccacggcgcTGAGCCGTATTTTAAAATAAATAATAGATAATGCTgagtgtataatttcaggtgacagagaagttctcactgatcaaatattacctgtgaccttaacgaaaaaagtagatc-aacccctggaa-attggcggaaggattttccacacacagctgtcagccgtgaaggcacaaaggtgaaagcaatct---tatgttgaaggaagaggctctgcctgaaatg--------------------------------ctgggaatggcatggggagaatgacaacacgactgtagag-agacggagagcACACTGGGTACACAGGAAACTAAGGAGGAATAAGGGGTGTGTGTTTTATACTCACAGCCATTGGACTCACCTCGGGG-TAACTAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCATAACTGGAATCTAGGAGACCGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGATTTAGACACTAAATGAATGAA--AGATGGACACAAGATGTGTTTGTGAGGTAGAGTAATTCGCAAGGAGGGCTTACCTGGTTTGATTTTTCCTAACTGTTTAATCTTCACTTCATTCATTTCTTTCTGAGATTTA--TTTTTCCTACGTGTAAATCAATACTTGGCAGAGGAGTGATAGATACATGAGGGGTGGTGTGAAGGAAGAGACCTATT---ATAATATAACACACAAGGTTCTGAAcggtggctcacacctgtaacccaacattttgggaggctaaggcggctggatcaagtgaggtcaggagttcgagatcagcctggacaacatggtgaaatcccatctctactaaatatacaaaaactagctgggcgaggtggcgcatgcctgtaataccag---ctattcgggaagctgaagcaggagaatggcttcaaccagggagggagaggtttcagtgagccaagatcacgtcattggactgcaccctaggtgacagagtgagactccatctcaaaaaat-aaaaataaaaaaTACATAAATATAATATAACATACACGAATGACAAAGGCACACCAATTCCAATCATCATCTTTCTATTTCTCTATA-ATGACTTCTTTGATCCTTTATCTTATTCATAAGAAAATCAGGTGAAAACATCTTCCCTATTTGGTTTTCTATGACCATGAGATCATACGGAAAATGTGA----------AACCCACCAGCACAGGTCCTGGAATAGAGAACATGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 4714 1541 + 40826 tttt-gaggtagagtctcactctgtcccacaggctggagtgcagtggcacaatctcaactcactgcaccctctgcctcctgggttcatgcaattcttctgcctcagcctaccgagtagctgggattacagccgcgcaccaccacactcggctaaaatttttt-ggtatatttttt--agtagagatgaggtttcaccgtgttgtgcaggct-gtctcaaactcccaatctcaagtaatctgaccgccttggcctccctaagtgcaaggattataggcgtgagccactgtgcccagccAGGATTTAAAATAAATAATAGATAATGCTgagtgtataatttcaggtgacagagaaggtctcactgatcagataatatttatgaccttaatgaaaaaaatggattcaacccttggaagattggcagaaggattttgcacactgagctctcagctgtgaaagcacaaaggtggaaacattcttaataagttcaaggaagagGCTCTGCCTGAAACGCTGGGTTCAAGGAAGAGGCTCTGCCCGAAACTCTGGGAATGAGATGGGGAGAATTACAAGACCACTGGAGAGAAGA-GAAGAGCACACTGGGCACACAGGAAACTAAGAAGGAACAAGGAGTGTGTGTTTTATACTCTCAGCCCTTGGATTCAACTCAGGGCTAACTAGGAATCCCTAAGTGATTAATAGTGACTGACGTGAAAATAAAGGAGGCCCCGGTGCGTAACTGGAATCTAGGAGATTGTTGAAAAGGCAATTCCCACCCCACTGGTGAAATGTAGAGTTGATTTACACACTAAATGAATGAA--AGATGGATATAAGATATGTTTGTGAGGTAGAATCATTTGCAGGGAGGTCTTGCTGGGTTTGATTTTTCCTAGTAGTTTAATCCTTGTTTCATTAATTTCTTTCTGAGATGTATTTTTTTTCTACATCTAAATCAATACCTGGCAGAGGAGTAATGGACACATGAGGGGTGGTGCAAATGAAAGGACCTAGT---ATAACATAATATACGAGACTGG--ATgggggctcatgcctgtaacccaacacttttggatgccaaggtgggtgcatcctttgagggtaggagtttgagaccagcctggccaacatggtgaaaccctgtgtgtgctaaaaatacaaaaattagcctggtgcattggcacgtgcctgtaatcccag---ttactagggaggctgaagcaggagaatggcttcaaccctggaggcagaggtttcagtgagctgagatggtgccactgcactccagcctgggcgacacagggggactctgtctcaaaaaataaaaaataaaaaaTACATAAATATGATATAACATACACAAATTACAAAGGCACCTGAATGCCAACCATCATTTTTCTACTTCTCTGTC-TTTAATTCTTTGACCCTTTACCTTATCCATTAAACAATCAGGCTAAAACCTCTTCCTTATTTGGCTTTCTGTGAGTTTGAGATCATACAGAAAATGTGGAAGCCCCCTGAACCCACCAACGCAGGCCCTGGAATAGAGAATGTGC i rheMac3.chrUn_JH290802 I 2 I 30282 s papAnu2.chr19 47702119 1507 + 51301725 tttt-gaggtagagtctcactctgtcccacaggctggagtgcagtggcacaatctcaactcactgcaccctctgcctcctgggttcatgcaattcttctgcctcagcctactgagtagctgggattacagccatgcaccaccacactcagctaaaatttttt-ggtatatttttt--agtagagatgaggtttcaccgtgttgtgcaggct-gtctcaaactcccaatctcaagtaatctgactgccttggcctccctaagtgcaaggattataggcgtgagccactgtgccaagccaggatttaaaataaataatagataatgCTGAGTGTATAATTTCAGGTGACAGAGAAGGTCTCACTGATCAGATAATATTTGTGAccttaatgaaaaaaatggatTCAACCCTTGGAAGATTGGCAGAAGGATTTTCCACACTGAGCTCTCAGCTGTGAAGGCACAAAGGTGGAAACATTCT---TAAGTTCAAGGAAGAGGCTCTGCCCGAAACG--------------------------------CTGGGAATGAGATGGGGAGAATTACAAGACcactggagag-aga-ggagagcacACTGGGCACACAGGAAACTAAGAAGGAACAAGGAGTGTGTGTTTTACACTCTCAGCCCTTGGATTCAACTCAGGGCTAACTAGGAATCCCTAAGTGATTAACAGTGACTGACGTGAAAATAAGGGAGGCCCCAGTGCATAACTGGAATCTAGGAGATTGTCGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTAGAGTTGATTTACAcactaaatgaatgaa--agatgGATATAAGATATGTTTGTGAGGTAGAATCATTTGCAGGGAGGTCTTGCTGGGTTTGATTTTTCCTAGTAGTTTAATccttgttttattaatttctttctgaGATGTACtttttttCTACATCTAAATCAATACCTGGCAGAGGAGCAATGGACACACGAGGGGTGGTGCAAATGAAAGGACCTAGTATAATAACATAATATGTGAGACTGtgcatgggggctcacgcctgtaacctaaCACTTTTggatgccaaggcgggtgcatcCCTTGagggtaggagtttgagaccagcctggccaacatggtgaaaccctgtgtgtgctaaaaatacaaaaattagcccggtgcattggcacatgcctgtaatcgcag---ttactagggaggctgaagcaggagaatggcttcaaccctggaggcagaggtttcagtgagctgagatggtgccactgcactccagcctgggtgacacagggggactctgtctcaaaaaat-aaaaataaaaaatacataaatatgataTAAC--ACACAAATTACAAAGGCACCTGAATACCAACCATCGTTTTTCTACTTCTCTGTC-TTTAATTCTTTGACCCTTTATCTTATCCATTAAACAATCAGGCTAAAACCTCTTCCTTATTTGGCTTTCTGTGAGCTTGAGATCATATGGAAAATGTGGAAGCCCCCTGAACCCACCAACGCAGGCCCTGGAATAGAGAATGTGC i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47382855 1508 + 50890351 tttt-gaggtagagtctcactctgtcccacaggctggagtgcagtgacacaatctcaactcactgcaacctctgcctcctgggttcatgcaattcttctgcctcagcctaccgagtagctgggattacagccgcgcaccaccacactcggctaatttttttt-ggtatatttttt--agtagagatgaggtttcaccgtgttgtgcagtct-gtctcaaactcccaatctcgagtaatctgaccgccttggcctccctaagtgcaaggattataggcgtgagccactgtgcccagtcAGGATTTAAAATAAATAATAGATAATGCTgagtgtataatttcaggtgacagagaaggtctcactgatcagataatatttgtgaccttaatgaaaaaaatggattcaacccttggaagattggcagaaagattttccacactgagccctcagccgtgaaggcaaaaaggtggaaacattct---tatgttcaaggaagagGCTCTGCCCAAAATG--------------------------------CTGGGAATGAGATGGCGAGAATTACAAGACCACTGGAGAG-AAA-GAAGAGCACACTGGGCACACAGGAAACTAAGAAGGAACAAGGAGTATGTGTTTTATACTCGCCGCCCTTGGATTCAACTCAGGGCTAACTAGGAATCCCTAAGTGATTAATAGTGACTGATGTGAAAATAAGGGGGGCCCCGGTGCGTAACTGGAATCTAGAAGATTGTCGAAAAGGCAATTCACATCCCACTGGTGAAATGTAGAGTTGATTTACACACTAAATGAATGAA--AGATGGATATAAGATGTGTTTGTGAGGTAGAATCATTTGCAGGGAGGTCTTGCTGGGTTTGATTTTTCCTAGTAGTTTAATCCTTGTTTCATTAATTTCTTTCTGAGATGTACTTTTTTTCTACATCTAAATCAATACCTGGCAGAGGAGCAATGGACACACGAGAGGTGGTGTAAATGAAAGGACCTAGTATAATAACATAATATGTGAGACTGTgcatgggggctcacacctgtaacccaacacttttggatgccaaggcgggtgcatcccttgagggtaggagcttgagaccagcctggccaacatggtgaaaccccgtgtgtactaaaaatacaaaaattagcccggtgcattggcacgtgcctgtaatcacag---ttactagggaggctgaagcaggagaatggcttcaaccctggaggcagaggtttcagtgagctgagatggcgccactgcactccagcctgggcaacacagggggactc--tctcaaaaaat-aaaaataaaaaaTACGTAAGTATGATATAACACACACAAATTACAAAGGCACCTGAATACCAACCATCATTTTTCTACTTCTCTGTCTTTTAATTCTTTGACCCTTTATCTTATCCATTAAACAATCAGGCTAAAACCTCTTTCTTATTTGGCTTTCTGTGAGCTTGAGATCATACGGAAAATGTGGAAGCCCCTTGAACCCACCAACGCAGGCTCTGGAATAGAGAATGTGC i chlSab2.chr6 I 24 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55627793 6660 + 59248254 T a score=2865.000000 s hg38.chr19_GL949747v2_alt 429489 2 + 729520 TC s panTro4.chr19 59668053 2 + 63644993 TC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56678740 2 + 60714840 TC i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 36537 2 + 40826 TC i rheMac3.chrUn_JH290802 I 30282 C 0 s papAnu2.chr19 47703626 2 + 51301725 TC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47384363 2 + 50890351 TC i chlSab2.chr6 C 0 I 45598 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55627793 6660 + 59248254 T a score=68531.000000 s hg38.chr19_GL949747v2_alt 429491 68 + 729520 TGTTCATGGCAC-AAAACTTGCCCCTTCACCCAAATCCCCCACCTCACCCCTACTTCCAATCACAT-TAA s panTro4.chr19 59668055 69 + 63644993 TGGTCATCACACAAAAAAATGCCCTCTCACCCAAAT-CCCCACCTCACCCCTACTTCCAATCACCTGTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56678742 68 + 60714840 TGTTCATGGCAT-AAAACTTGCCCCTTCACCCAAATCCCCCACCTCACCCCTACTTCCAATCATAT-TAA i ponAbe2.chr19 C 0 I 1917 s rheMac3.chrUn_JH290802 36539 68 + 40826 TGTTCATGGCAT-AAAACTTGCCCCCTCACCCAAATCCCCCACCTCACCTCTACTTCCTATCACAT-TAA i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47703628 68 + 51301725 TGTTCATGGTAT-AAAACTTGTCCTCTCACCCAAATCCCCTACCTGACTCCTACTTCCAAGCACCT-GTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47429963 68 + 50890351 TGTTCATGGCAT-AAAACTTGCCCCCTCACCCAAATCCCCCACCTCACCTCTACTTCCTATCATAT-TAA i chlSab2.chr6 I 45598 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55627793 6660 + 59248254 T a score=292199.000000 s hg38.chr19_GL949747v2_alt 429559 284 + 729520 -TGATACAGATAGATCATGGGGAGGTAAAAACTAATATTCTTTG----GAGT----TCAGATCGTAGACTCAGAGACCAGTGCCAGCACTATCTCCTGGTCACCTTTTGGAGTAATTCACAGAAAGACAGGCTGTATTGAAGCAACAGATGATGGAGGGGGTGGTCTTTCCCCCAGACTCTCGGGTGGAACAGCAGCCTAATATCTGACTCCCAAGATGACAAA-AGTAGCATGTTGCCCACGAGCTTCATCATTATTTCCTGGCTGTTTGATATAAGACAGCTCAACCTCACT s panTro4.chr19 59668124 289 + 63644993 -AGATTCAGATAGACCATGGGGAGGTAAACATTAATACTCCTTGGAGTGAGT----CCAGATCTTGGAATCAGAGATCAGTGCCAGCACTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTATAGAAGCAATAGATGGCCGAGGAGGTGGTCCTTCCCCCAGCCTCTCGGGTAGAACAGCAGCCTAACATGTGTCTCCCGAGATCACAAAGAGTAGCACGTTGCACACGGGCTTCAACACTATTTCCTGGACGTTCGACATAAGAGAATTCTACTTTGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56680727 284 + 60714840 -TGGCACAGATAGATCATGGGGAGGTAAAAACTAATATTCTTTG----GAGT----TCAGATCTTAGACTCAGAGACCAGTGCCAGCACTATCTCCTGGTCACCTTTTGGACTAATTCACAGAAAGACAGGCTGTATTGAAGCAACCGATGAGGGAGGGGGTGGTCCTTCCCCGGGACTCTCGGGTGGAACAGCAGCCTAATATCTGACTCCCAAGATCACAAA-AGTAGCACATTGCCCACGAGCTTCATCATCGTTTCCTGGCTGTTTGATATAAGACAGTTCAACCTCACT i ponAbe2.chr19 I 1917 C 0 s rheMac3.chrUn_JH290802 36607 286 + 40826 GAGACACAGATAGACGGTGGGAAGGTAAAAACTAATATTCTTTG----GAGT----TCAGATCTTGGACTCAGAGACCAGCGCCAGCACCATCTCCTGGTCACCTTTTATACGAATTCACAGAAGGACAGGTTGTACCGAAGCAATAGATGATGGAGGGGGTTGTCCTTCCTCCGGACTCTCAGGTAGAACAGCAGCCTAATATAGGACTCCCGAGATCACAAAAAGGAGCACGTTCTTCACGACCTTCATCATTATTTCCTGGCTGTTTGATATATGACAGTTCTACTTCACT i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47703696 290 + 51301725 GAGATACAGATAGATCATGGGAAGGTAAAAACTAATACTCTTTG----GAGTGAGCTCAGATCTTGGACTCAGAGACCAGCGCCAGCACTATCTCCTGGTCACATTTCGTACTAACTCACAGAAGAACAGGGTGTATTGAAACAATAGATGATGGAGGTGGTTGTGCTTCCCCCGGACTCTCAGGTAGAACAACAGCTTAATATGTGTCTCAGGAGATCACAAAAAGTAGCACATTGTTCCTGGGCTGCATCATTATTTCATGGCTGtttgatttaagtggggtttacttcacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47430031 285 + 50890351 GAGACACAGATAGACCATGGGAAGGTAAAAACTAATATTCTTTG----GAGT----TCAGACCTTGGACTCAGAGACCAGTGCCAGCACCATCTCCTGGTCACCTTTTATACGAATTCACAGAAGGACAGGTTGTACCGAAGCAATAGATGATGGAGGGGGTTGTCCTTCCTCTGGACTCTCAGGTAGAACGGCAGCCTAATAT-TGACTCCCGAGATCACAAAAAGGAGCACGTTCTTCACGAGCTTCATCATTATTTCCTGGCTGTTTGATATATGACAGTTCTACTTCACT i chlSab2.chr6 C 0 I 20 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55627793 6660 + 59248254 T a score=910.000000 s hg38.chr19_GL949747v2_alt 429843 1 + 729520 T s panTro4.chr19 59668413 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56681011 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 36893 1 + 40826 T i rheMac3.chrUn_JH290802 C 0 I 19 s papAnu2.chr19 47703986 1 + 51301725 t i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e chlSab2.chr6 47430316 20 + 50890351 I e macFas5.chr19 55627793 6660 + 59248254 T a score=6668.000000 s hg38.chr19_GL949747v2_alt 429844 22 + 729520 ATGTTGATTTCAATGTCACTGT s panTro4.chr19 59668414 22 + 63644993 TTTTTAATCTTGATTTCACTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56681012 22 + 60714840 CTGTTGATTTCAACGTCACTGT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47703987 22 + 51301725 tttttgatcttgatttcacttt i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e chlSab2.chr6 47430316 20 + 50890351 I e macFas5.chr19 55627793 6660 + 59248254 T e rheMac3.chrUn_JH290802 36894 19 + 40826 I a score=1156788.000000 s hg38.chr19_GL949747v2_alt 429866 1071 + 729520 TTTTTCCTTTTCTTGGAGAATGTAATTTGTTTGAGTCAAGAGGGTTGTGGATGTAGAAACTGTAAAGCACATTCACTGTGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTaaacacctcccatactgcacctggggctgtgccaatttctatcactcaccatcactccagggagacagaacacacagggaatacattacat-aggcaggttcattacttatagataagcagcgagtgacaacagaaaccttcctttcagggtgagccagtccctcaaggctcagaaaaactgctcaggacacatggagtcacttcatgtgcactgtagctgggggaagccagaaagcagcccagcctgggttttgtaccctggagccacagggaacactcagctaaagcactgcatgatgttctcctccaggaagaacaggaagacagcccaggctgttctgagacgttcctcctgatctcaggatgttgctgtcttagcctatttttgttgctataaaagaacacttgagcctgggtatcttctaaagaaaagagatgtgtttggctcactgatctgcacgctgtactagaagcaggacactaccatctatttctggctgcggcctcaggctgctcccacactgacagaagagaagggggtcctgcgtgtgcagagaccacagagatcacatggcaagagagggagaa------agg------gggtgtgatggagcttccaagctctttttaagaatcaactctccagggtactaatagagggagaacttgctaaccccgtcctctggggacagcattaatctattcatgatggatccacccccatgaccaaaacacccctcccaataggcacaacctcccacactggggattaaatttcaaagtggggtttggaggggtcaaacattgaaacaatagcagttgtatcatcagcacattctattgttattatgaaaactataacggagaaagcaggagaaagctgggtcTCCCGCCTCGTGGGTGCTTGTCCTAAAGAGGTGTTTTATGTGGTTGCCTGGCAACCAAGAAATGAGAGACAATCCAC s panTro4.chr19 59668436 1074 + 63644993 TGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTGACTCAAGAATGCTGTGGATGTAGAAATCCTAAAGCACATTCGCTGTGTATCAATCCCAGTGCAGTCTTCCCAGAGAAGACTCTAAACACCTGCTGGactgcacctgggcctatgccaattcctatcactcaccgtcactccagggagacagaacacacagagaatacattacac-aggcaggtgcattactaacagataagcagcgagtgacaacagaaacctacatttcaatgtgagccagtccctcaaggctcagaaaagctgctcgggacatatggagtcatcccatttgcagtgtagctgggggaagccagaaagcagcccagcctgggttttgtaccctggagccacaggaagccctcagctaaagcactgcatgacgtcctcctccaggaagaacaggaagacagcccaggctgttctgagacattcctcctgatctcaggacgttgctgtcttagtccatttttgttgctctaaaggaacacttgagcctgggtaagttctaaagaaaagagattggtttgcctcaccgttctgcaggctgtactggaagcatggcaccagcatctatttatcgtgatggcctcaggctgctcccactctggcagaagggaaagagggtctgtccgtgcagagaccacggagatcacacggcaaccgagggagcaaggaggagg------gggagcaatggagtttccaagctctttttaacaatcagctctccagga-actaatagagggggaacttgctaaccccgtttccttgaaacagcattgatctgttcatgatggatccacctccatgactcaaaca--cttcccaagaagcccaccctcccacactgggggttaaatttcaatgtgaggtttgaaggggtcaaacatctcaactaaagtagtggtatcctcagcacgttcgatggttactatgagagctataactgagaaagcaggaggaagctaggtctcccgccatctgggtgcttgtcctAAAGAGACGCTGTATGTGGTTACCTGTCAATCAAGAAATGCAAGACAATTCAT i panTro4.chr19 C 0 I 2202 s ponAbe2.chr19 56681034 1071 + 60714840 TTTTGCCTTTACGTGGAGAATGTAATTTGTTTGAGTCAAGAGGGTTGTGGATGTAGAAACTGTAAAGCACATTCGCTGTGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTaaacaccccaggtactgcacctggggctgtaccaatttctatcactcaccgtcactccagggagacagaacacacagagaatacattacat-aggcaggttcattacttatagataagcagcaagtgacaacagaaaccttcccttcagggtgagccagtccgccaaggctcagaaaaactgctcaggacacatggagtcacctcatgtgcactgtagctgggggaacccagaaagcagcccagcctgggtgttgtaccctggagccacaggaagcactcagctaaagcactgcatgacgtcctcctccaggaagaacaggaagacatgccacgctgttctgggacattcctcctgatctcaggatgttgctgtcttaatccatttttgttgctataaaagaacacttgagcctgggtatcttctaaagaaaagagatgtgtttggctcactgatctgcaggctgtactagaagcaggacaccagcatctatttctggctgcggcctcaggctgctcccactctgacagaagacaaggggggcctgcgtgtgcagagaacacggagatcacatggcaagagagggagaa------agg------gggtgtaatgaagcttccaagctctttttaagaatcaactctccagggcactaatagagggagaacttgctaaccccgtcctctggggacagcattaatctattcatgatggatccaccccgctgaccaaaacacccctcccaataggcacaacctcacacactggggattaaatttcaaagtggagtttggaggggtcaaacattgaaactgtaacagttgtatcatcagcacattctattgttgttatgaaaactataactgagaaagcaggagaaagctgggtcTCCCACCAAGTGGGTGCTTGTCCTAAAGAGGTGTTTTATGTGGTTGCCTGGCAACCAAGAAATGACAGACAATCCAC i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 36913 1064 + 40826 TTATGCCTTTTCTTGTCGAATGTAATGTGTTTGAGTCAAGAGGGATGTGGCCGTAGAAATTGTAAAGCACATTCACTGTGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTaaacacctcctgtactgcacctggggctatgccagtttctgtcactcactgtcactccagggaaacaaaacacacatagaatacattacataaggtgggttcattactaacacataagcagcaactgacaacagaagcctacatttcaatgtgagccagtcccccaaggctcagaaaagctgctcgggacatatggagtcaccccatttgcactgcagctgggggaacccagaaagcagcccagcctgggttttgtaccctggagccacaggaagcactgagctaaagcactgcatgacgtcctcctctgggaagaacaggaagacagcccaggctgttgtgggacgttcctcctgatctcaggatgtt---gtcttagtccctttttgtggctataaaacaacacttgagcctgggtaacttctaaagaaaacagatttggttggctcacggttctgcaaggtgtactagaggcaggacaccagcatctatttctggctgcggcctcaggctgctcctactctggtagaagagaagg-gggcttgcatgtgcagagaccaccgagatcacacggcaagacagggagaa------agg------gggtgtgatggagcttccaacctctttttaagaaccgagtctctagagtactaataaagggagaa-ttgctaaccctgtcg-tgtgggggaacattaatctatttatgatggatccacccccatgacccaaaca--cgtccccataggcaccaccacccacactcagggttaaatttcagagtgaagattgggggggtcaaatatccatatgatagcaggtgtctcatcagcacattctgtagttattacgaaaactataactgagaaagcaggagaaagctgggtcTCCCACCACGTGGGTGCTTGTCCTAAAGAGATGTTTTATGGGGTTGCCTGGCAACCAAGAAATGAGAGACAATCCTC i rheMac3.chrUn_JH290802 I 19 C 0 s papAnu2.chr19 47704009 1071 + 51301725 ttatttcttttcttggagaATGTAATGTGTTTGAGTCAAGAGGGTTGTGGCTGTAGAAATTGTAAAGCACATTCACTGAGTATCAATCCGAGTCCAGTCTTCCCAGAGAAGA--CTAAACACCTCCTGTACTGCACCTGGGGCTATGCCAGTTTCTATCCCTCACCGTCACTCCAGGGAGACAGAACACACAGAGAATACATGACAT-AGGCAGGTTCATTGCTAACAGATAACCAGCAAGTGACAACAGAAGCCTATATTTCAATGTGAGCCAGTCCCCCAAGGCTCAGAAAAGCTGCTCGGGACATATGGAGTCACCCCATTTGCACTGCAGCTGGGGGAACCCACAAAGCAGCCCGGCCTGGGTTTTGTACCCTGGAGCCACAGGAAGCACTGAGCTAAAGCACTGCATGACGTCCTCCTCTGGGAAGAACAGGAAGACAGCCCAGGCTGTTCTGGGACATTCCTCCTGATCTCAGGACGTTGCCGTCTTAGTCCCTTTTTGTGGCTATAAAAGAACACTTGAGCCTGAGTAACTTCTAAAGAAATGAGATTTGTTTgcctcatagttctgcaggctgtactaGAAGCATGGAACCAGCATCTATTTCTTCTGATGGCCTCAGGCTGCTCCCACTCTGGCAGAAAGGAAGGAGGGTCTGTGTGTGCAGAGACCACAGAGATCACActgcaagagagggagca------aggggAAGAGGGAGCGATGGAGCTTCCAAGCtctgtttaacaaccagctctccag-GAACTAATAGAGGGAGAACTTGCTAACCCTGTCTCCTTGGGACAGCATTGATCTATTCACGAtggatccacctccatgacccaaaca--cctcccaagaGGCCCAACCTCCCACACTGGGGGTTAAATTTCAATGTG-AGGTTTCAAGGGTCAAACATCTAAACTAAAGCAGTGGTATCCTCAGCACGTTCTATGGTTCCTATGAGAGCTATAactgagagaggaggagaaagctgGGTCTCCCGCCATCTGGCTGTTTGTCCTAAAGAGACGTTGTATATGGCTACCTGTCAATCAAGAAATGCGAGACAATCCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47430336 1052 + 50890351 TTATTCCTTTTCTTGCCGAATGTAATGCGTTTGAGTCAAGTGGGTTGTGGCCGTAGAAATTGAAAAGCACATTCACTGTGTATCGATCCCAGTCCAGTCTTCCCAGAGAAGACTCTaaacacctcctgtactgcacctggggctatgccagtttctatccctcaccgtcactccagggagacagaacacacagagaatacattacat-agacaggttcactactaacagataaccagcaagtgactacagaagcctacatttcagtgtgagccagtgccccaaggctcagaaaagctgcccgagacatacggagtcaccgcatttgcactgcagctgagggaacccagaaagcaacccagcctgggttttgtaccctggagctacaggaagcactgagctaaagcactgcatggtgtcctcctctgggaagaacaggaagacagccca-gctgttctgggactttcctcctgatctcaggatgttgctgtcttagtccatttttgaggttgtaaaagaacacttgagcctgggtaacttctacagaaaagagaattggttgacttacagttctgcaagctgtacaagaggcaggacaccagcatctatttctggctgcggcctcaggctgctcctactctggtagaagagaaggggggcctacatgtgcagtgaccaccgagatcacatggcaagacagggagaa------agg------gagtgtgatggagcttccaagctctttttaagaaccaactctccagagtactaatagagggagaacgtgctaaccccgtca-tgtggggcagcat------------gatggatccacccccatcacccaaata--cctcctgataagaccaacttcccacactcagggttaaatttcaaagtgaagtttctgggggtcaaatatccatacgatagcaggtgt---ctcagcacattccgtggttattatgaaaactataactgagaaagcaggagaaagctgggccTCCCACCACGTGGGTGCTTGTCCTAAAGAGATGTTTTATGGGGTTGCCTGGCAACCAAGAAATGAGAGACAATCCAC i chlSab2.chr6 I 20 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55627793 6660 + 59248254 T a score=846854.000000 s hg38.chr19_GL949747v2_alt 430937 736 + 729520 AAAGAGGAACTGCTATGGTTAGCTTCTTATTGGATTCTCATCTTCCTCCAGGTATCGCCAGACACCTGCATGCTGTGATTAGGTACTCAGTGGCCATCATCCTCTTCACCATCCTTCCCTTCTTTCTCCTTCATCGCTGGTGCTCCAA-AAAAAAAAGTAAGCCTCACGAAGCAGAGGCCAGAGAACTCAGGGCCCTGTGCG----------GAAGCAGGATGGGAGCACGCAGGTGTGTGTTCCTCACTGGCAGGAAAGTCTCTGGCCCAAGGCAGGAGCCA--GAGGCAGAGCTTTCTAGAGAGAGCACCAGACAACCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTGTGAACTGTATCCTCACGTCCCCTGCAGCCACTCACATCCAGGAGAAGATTCCATGACAGGCAGAAAGTGGGAGATAGAATCAATGGGATGGGAACTGACAGCTATTCATGGAATGGGGTCTTGCACTCAGAGAGATGGAATGTCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCAGGCACCTATGGCCTCCCCCTGTGTGTTGGTATCTGTTCATGAAATGAGGACCCAGAAGTGCCCTCCCAGCTGTTTCGATTGCTTCCGTCTCCTACAGATGCTGCTGTAATGAACCAAGAGCCTGCGGGACACAGAACAGTGAACAGGGAGGTAGGTCCTCCT-AGCCCAGCCTCATGGATACAGTCTTATTCCCTAATAGTCCTGAAAAATGTGAAC s panTro4.chr19 59671712 737 + 63644993 aaaGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCCTCTTCTTCCAGGTAACCCCAAACACCTGCACGTTCTGATTGGGACCTCAGTGGTCAAAATCCCTTTCACCATCCTCCTCTTCTTTCTCCTTCATCGCTGCTGCTCCAACAAAAAAAAGTAAGTCTCATGAAGCAGAGGCCAGAGAGCTCAGGGCCATGTGGG----------GAAGCAGGATGGGAGCACTCAGGTGTGTGTTCCTCACTGGCAGGATGGTCCCTGGCCCAAGGCAGCAGCCACAGAGGGAGGACTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTGTCCTCACGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTGAGCTCAGAGAGATAGAATGTATGAGTCTG-CTGTTGGCAACTGAGGGACCTCAGGCACCTATGGCCTCCCCCTGTATGTTGGTATCTGCTTATGAAACGAGGAGCCTGAAGTGCCCTCTGAGCTGTTTTGATGACTTCCATCTTCTACAGATGCTGCCGTAATGGACCAAGAGCCTGCAGGGAACAGAACAGTGAAGAGGGAGGTAGGTGCTCCTTGGCCCAGCCTCGTGGCTA--GTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGC i panTro4.chr19 I 2202 C 0 s ponAbe2.chr19 56682105 737 + 60714840 AAAGAGGAACTGCTATGGTTAGCTTCTTATTGGATTCCCATCTTCCTCCAGGTATCGCCAGGCACCTGCATGCTGTGATTAGGTACTCAGTGGCCATCATCCTCTTCACCACCCTCCTCTTCTTTCTCCTTCGTCGCTGGTGCTCCAA-AAAAAAAAGTAAGCCTCGTGAAGCAGAGGCCAGAGAACTCAGGGCCCTGTGGG----------GAAGCAGGATGAGAGCACGCAGGTGTGTGTTCCTCACTGGCAGGATGGTCCCTGTCCCAAGGCAGGAGCCA--GAGGCAGAGCTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTAATTGTGAACTGTATCCTCACGTCCCCTGCAGCCACTCACATCCAAGAGAAGGTTCCATGACAGGCAGAAAATGGGAGATAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGAATGGGGTCTTGCACTCAGAGAGATGGAATCTCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCAGGCACCTATGGCCTCCCCCTGTGTGTTGGTATCTGTTCATGAAATGGGGACCCAGAAGTGCCCTCCCAGCTGTTTCGATGACTTCTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCGGGGGACAGAACGGTGAACACGGAGGTAGGTCCTCCTCGGCCCAGCCTCATGGATACAGTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGC i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 37977 746 + 40826 AAAGAGGAACTGCTATGGTGAGCTTCTCATTGGATTTCCATCTTCCTCCAGGTATCACCAGACACCTGCCTATTGTGATTAGGTACTCGGTGGCCACCATCTTCTTCACCATCCTCCTCTTCTTTCTCCTTCGTTGCTGGTGCTCCGA-CAAAAAGAGTAAGTCTCAAAAACCAGAGGCCAGAGACCTCAGGGCCATGTAGGGAGGAAGGATGAGGAGGGATGGGAGCACGTAGGTGTGTGTTTCTCACCAGCAGGATGGTCTCGGG-CCAAAGCAGGAGCCACAGAGGCAGAGCGTTCTAGAGAGAGCATCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCAGATTCTGAACTGTATCCTCATGT-CCCTGGAGCCACTGACATCCAGGAGAAGATTCCATGACAGGCAGAAAGTGGGAGGCAGAATCACTGGGATGGGAACTGACAGTTCTTTATGGGATGGGTCCTTCAGCTCAGAGAGATAGAATGTCTGAGTC-GGCTGTTGGCAGCTGAGGGACCTCAGGCACCTACGACCTCCCGCTGTGTGTTGGGCTCTGCTCATGAAATGATGACCCAGAAGTGCCCTCCCAGCTCTTTTGATGACTTCTGTCTCCTACAGATGCTGCTGTAATGGACCCAGAGCCTGCGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCTCCCCAGCCTCATGGATATAGTCTTATTCCCTACTAGTCCTGAAGAATGTGAGC i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47705080 738 + 51301725 AAGGAGGAACCGCTGTGATTAGCTTCTTATTGGTGTCTCGTCTTCCTCCAGGTAACCCCAGACACCTGCATGTTCTGATTGTGTCCTCAGTGGTTATGATCCCCTTCAccatcctcctcttctttctcctgcatCGCTGGTGCTCCAA-CAAAAAGAGTAAGTCTCACGAAGGAGAGGCCAGAGACCTCAGGGCCTTGTGGG----------GAAGTGGGATGGGAGCACGCAGATGTGTGTTTCTCACTGGCAGGATGGTCTCGGGCCCAAGGCAGGAGCCACAGAGGCAGGGATTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCCCAGACCATTGCCTGATTCTCAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGGCAGAATCACTGGGATGGGAACTGACAGCTCTTCATGGGATGGGTCCTTTAGCTCAGAGAGACAGAATGTCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCAGGCACCTACAGTCTCCCGCTGTGTGTTGGGCTCTGCTCATGAAATGAGGACCCAGAAGTGTCCTCCCAGCTGTTTTGATGACTTCCGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGTGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGCCCCAGCCTCATGGATATAGTCTTATTCCCTAAGAGGCCTGAAAAATAGGAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47431388 739 + 50890351 AAAGAGGAACTGCTATGGTGAGCTTCTCATTGGATTCCCATATTCCCCCAGGTATCACCAGACACCTGCCTGCTGTGATTAGGTACTCGGTGGCCACCGTCTTCCTCATCATCCTCCTCTTCTTTCTCCTTCATTGCTGGTGCTCCAA-CAAAAAGAGTAAGTCTCACAAAGCAGAGGTCAGAGACCTCAGAGCCGTGTGGG----------GAAGCGGGATGGGAGCACGCAGGTGTGTGTTCCTCACCGGCAGGATGGCCTCTGGCCCAAGGCAGGAGCCACAGAGGCAGAGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGTCTGATTCTGAACTGTATCCTCACGTCCCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGGCAGAATCAATGGGATGCAAATTGAGAGCTATTCATGGGATGGGTCCCTGAACTCAGAGAGACAGAATGTCTGAGCCTGGCTGTTGGCAGCTGAGGGACCTCAGGCACCTACAGTCTCCCGCTGTGTGTTGGTATCTCCTCATGAAATGAGGACCCAGAAGTGCCCTCCCAGCTGTTTTGATGACTTCCGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGTGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTAAGGCCAGCCTCATGGATATAGTCTTATTCCCTACTAGTCCTGAAGAATGTGAGC i chlSab2.chr6 C 0 I 1212 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55627793 6660 + 59248254 T a score=-2387.000000 s hg38.chr19_GL949747v2_alt 431673 1 + 729520 -A s panTro4.chr19 59672449 1 + 63644993 -A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56682842 1 + 60714840 -A i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 38723 1 + 40826 C- i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47705818 1 + 51301725 C- i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e chlSab2.chr6 47432127 1212 + 50890351 I e macFas5.chr19 55627793 6660 + 59248254 T a score=-174.000000 s hg38.chr19_GL949747v2_alt 431674 2 + 729520 CC s panTro4.chr19 59672450 2 + 63644993 CC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56682843 2 + 60714840 CC i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 38724 1 + 40826 C- i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47705819 2 + 51301725 CT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47433339 2 + 50890351 CC i chlSab2.chr6 I 1212 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55627793 6660 + 59248254 T a score=248820.000000 s hg38.chr19_GL949747v2_alt 431676 181 + 729520 CTCCCTCACTCAGGATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCATTTTCACACAGAGAAAAATCACTGGCCCTTCTCAGAGGAGCAAGAGACCCTCAACAGATACCAGCGTGTGTATAGAACTT-CCAAATGCTGAGCCCA s panTro4.chr19 59672452 181 + 63644993 CTCCCTCACTCAGCATTTCCCTTGCTCCAGGATTCTGTTGAACAAGACTCTCAGGAGGTGTCATACGCATAATTGGATCACTGCGTTTTCACACAGAGAAAAATCACTCGCCCTTCTCAGACGCCCAAGACACCCCCAACAGATACCAGCGTGTACACGGAACTT-CCAAATGCTGAGCCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56682845 181 + 60714840 CTCCCTCATTCAACATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATATGCACAGTTGGATCAGTGCATTTTCACACAGAGAAAAATCACTGGCCCTTCTCAGAGAACCAAGAGACCCCCAACAGATACCAGTGTGTACATAGAACTT-CCAAATGCTGAGCCCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 38725 181 + 40826 CTCCCTCACTCAACATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTTTCACACGGGGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAGCGTGTACATAGAACTT-CCAAATGCTGAGCCCA i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47705821 181 + 51301725 CTCCCTCACTCAACATTTCCCTCTCTGCAGGACTCTGATGAACCAGATCCTCAGGAGGTGACATACGCACAGTTGGATCACCGCGTTTTCACTCAGAGAAAAATCGCTCGCCCTTCTCAGAGGCCCAAGAGACCCCCAACAGATACCAGCGTGTACACGGAGCTT-CCACATGCTGAGCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47433341 181 + 50890351 CTCCCTCACTCAACATTTCCCTCTCTCCAGGACTCTGATGAACCAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTCTCACACAGGGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAGCGTATACACAGAGCTT-CCAAATACTGAGCCCA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102921159 180 + 122678785 CCTTCTCACCTGG-GTCTCTCTCTCT-CAGACCCCTACTGCAGGAGGCCCCCAGGACGTGACATATGCTCAGCTGGACCACCACATCCTCACACAGAGGACAGCTCCAGCCACATCCCCACAGTCTGTGGAGCCCATGGCTGAGTCCAGTACATATGCAGCCCTTGCCAGACACTGACTCCA i canFam3.chr1 N 0 N 0 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55627793 6660 + 59248254 T a score=1202991.000000 s hg38.chr19_GL949747v2_alt 431857 1082 + 729520 GAGC----GTTGTCTCCTGCCCATGAGCACCACAGTCAGGCCTTGATGGGATCTTCTAGGGAGACAACAGCCCTGTCTCAAACCCAGCTTGCCAGCTCTAATGTACCAGCAGCTGGAATCTGAAGGCGTGAGTCTCCATCTTAGAGCATCACTCTTCCTCACACCACAAATCTG---G---TGCCTGTCTCTTGCTTACCAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCTATTTCacttgacccctgcccacctctccaacctaactggcttacttcctagt-ctacttgaggctgcaatcacactgaggaactcacaattccaaacatacaagaggctctctcttaacacggcacttagacacgtgctgttccaccttccctcgtgctgttccacctttcctcagactatttttcagccttctggcatcagcAAACCTTATAAAATTTT-TT---TGATTTCAGTGTAGTTCTCTCCTCTTCAAATAAACATGTCTGCCTTCATTCTTTAG-----GT-----GACTCTTTTTTTGGCTGAAAGTTTCCAGTGTTATCATTACCATGTCCAAATAACTCCAACTGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAGGGTGGAGCCTCATTTGTCTCTGAGACTCCAATTTCCATCCAAAGATGCAGCACATAAGAGGTTCCAAGGATCGTGAATCACATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCATGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGGACACATATCAACACATCATCTTTCATACTATAAATATAcagtcggtcctctgtatctgtgggatttacaggtgtttattgaaccaaatataaatcaaaaatattcagag---aaaaaatccacaaagtttcaaaa-agcaaaactatgttgaatggacacaaatgaagc--tgtgtgtaggctgtatcaggaattataaataatcaagggatgatttcatgtacacaggaggatgtgcatgggttatttgcaaatg s panTro4.chr19 59672633 1096 + 63644993 GATCCAAAGTTGTCTCCTGCCCACGAGCACCACAGTCAGGCCTTGAGGGGATCTTCTAGGGAGACAACAGCCCTGTCTCAAAACCGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCGTCAGTCTTCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTG---AACATGCCTCTCTCTTGTTTACAAATGTGTAAGGTCCCCACTGCCTGCTGGAGAGAAAACACACTCCTTTCCTTAGCCCAGAATTCTCCATTTCacttgacccctgcccacctctccaacctaactggcttacttcctagt-ctacttgaggctgcaatcacactgaggaactcacaattccaaacatacaagaggctccctcttaacgcagcacttagacacgtgctgttccaccttccctcatgctgttccacctccactcagactatctttcagccttctgtcagcagtaaaacttataaattttt-ttgaataatttcaatgtagttttccctccttcaaataaacatgtctgtcctcatggtttcg-----gtaatgggactctatttttgcctacga-cttctggtgttatcattaccatgtccacataagcccatatgttctccactgggttctcacccctagactctgagcttctgtaagcagagtggagcctcatttgtctctgggactccaatttccatccaaagatgcagcacataggaggtTCCAAGGATCGTGAATCACATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACGATGAAACATTTGTACAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGGACACATATCAACATATCATCTTTCATACTATAATTATAcagtcactcctccatatctgtgggatttacaggtctttattgaaccaagtataaatcaaaaatattcagag---aaaatatccacaaactttcaaaa-agcaagactgtgttgaatggacacaaatgaggc--agtgtgtaggctgtatcaagaattataagtaaccaagagatgattttatgtatacaggaggatgtgcatgggttatatccaaatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56683026 1079 + 60714840 GAGC----GTTGTCTCCTTCCCACAAGCACCACAGACAGGCCTTGATGGGATCTTCTAGAGAGACAATAGCCCTGTCTCAAAATCAGCTTGCCAGCTCCCATGTACCAGCAGCTGGAATCCGAAGGCGTCAGTCTGCATCTTAGAGCATCGTTCTTCCTCACACCACAAATCTG---G---TGTCTCTCTCTTGCTTACTAATGTCTATGGTTCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCGTAGCCCACAATTGTCCATTTCACTTCAcccctggccacctctccagcctaactggcttacttcctagt-cctactgaggaagttcctacactgaggaactcacaattccaaacatacaagaggctccctcttaacacggcacttagacacgtgctgttccaccttacttgatgctgttccacctttcctcaggctatttttcagccttctggcatcagc-AACCTTATAAAATTTT-TTTA-TGATTTCAATGTAGTTCTCTCCTCTTCAAATAAACGTGTCTGCCCTCATTCTTTAG-----GT-----GACTCTTTTATTGCCGAAAG-TTTCCGGTGTTATCATTACTATGTTCATATAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAGGGTGGAGCCTCATTTGTCTCTGAGACTCCAATTTCCTTCCAAAGATGCAGCACATAGGAGGTTCCAAGGATCGTGAATCACATGAACAAGTGATATTCTTACTCTCTGCAGACCTGCAGAGCCGGCAGAGTCATTCCACGATGAAACATTTGCAGAGTCATAGGTCTTGTTAGTCTCATCTCCACGGGGACACATATCAACACATCATCTTTCACACTATAAATATAcagtcgctcctccatatctgtggggtttacaggtgtttatggaaccaaatataaatcaaaaatattcagag---aaaaaatccacaaagtttcaaaa-agcaaaactatgttgaatggacacaaataaagc--tgtgtgtgggctgtatcagga---ataagtaatcaagagatgatttcatgtatacaggaggatgtgcatgggttatttgcaaacg i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 38906 1078 + 40826 GATC----GTTGTCTCCTGCCCACGAGCACCACAGACAGGCCTGGA-GGGGTCTTCTAGGGAGACAACAGCCCTGTCTCAAAACCGGCTTCACAGCTCCA--GTGCCAGCAGCTGGAATCTGAAGTCTCGACTCTGCATCTTAGAGCATTGCTCTTCCTCACACCACAAATCTG---C---TGGCTCTGTCTTGCTTACCAACGTCTGCGGTTCCCACTGCCTGCTGGAGAGAAAATGCACTCCTTTGCTTAACCCACAATTCTCCACTTCACTTGACCCCTGCCCACCTCTCCAAACTAACTGACTTGCTTCCTAGTCCTACTTGAGGCTGCAGTCACACTGAGGAGCTCACAATTCCAAACATACAAGAGGCTCCGTCTTAACACGGCACTTAGACTCACGCTGTTCCACCTTCCCTCATGCTGTTCCACCTCCCCTCAGACGATTTTTCAGTCTTCTGTCATCAGTAAACCTTATAAAAATTT-GTTG-TGATTTCTATGTAGCTCTCTCGTCTTCAAATAAACGTGACTGTCCTCATTCTATAG-----GT-----GAGTCTTTTTTTCCCTAAAT-TTTCTGGTGTTATCATTACTATGTTCATATAACCCCATATGTTCTCCACTGGGTTCTCGCCCCTGGAATCTGAGCTTCTGGAAG-AG-GTGGAGCCTGATTTGTCTCTGGGACTCCAATTTCCATCCAACGATACAGCACGTAGGCGGTTTCAAGGATCACGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACATCTGTAGAGTCATAGGCCTTGTTGGTCTCATCTCCACGGGGACACATGTCCACACATCATC-TTCATACTATAAATACAcagtcgctcctccagacctgtggggtttacaggtgtttattgagccaactataaatcaaaaatattcagag---aaaaaatccacaaagtttcaaaa-agcaaaactatgttgaatggacacaaatgaaat--ggtatgtaggctgtgtcaggaattataagtaatctagagatgatttcatgtatacaggaggatgaacatgggttatatgcaaacg i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47706002 1096 + 51301725 GATC----ATTGTCTCCTGCCCATGAGCACCACAGACAGGCCTGGAGGGGGTCCTCCAGGGAGACAACAGCCCTGTCTCAAACCCAGGTTGCTGGTTCCAATGTACCAGCAGCAGGAATCTGAAGGCGCGACTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACA---TGCCTCTCTCTTGCTTGCCAATGTCTAAGGTCCCCACTGCCTGCTGGAAAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCACTTCCCTTGacccctgcccacctctccaaCCT-ACTGGCTTACTTCCTAGTCCTACTGGAGGCTGCAGTCACACTGAGGAACTCACAGTTCCAAACATACGAGAGGCTCCCTCTTAACACAGCACTT-GACAGGTGCTGTTCCACCTTCCCTCATGCTGTTCCACCTCCCCCCAGACTATCTTTCAGCCTTCTGTCAGCAGTGAaacttataaatttttaaaaa-taatttcaatggaGTTTTCTCTTCTTCAAATAAACATGTCTGCCCTCATCCTTTAGGTAATGT-----GACTCTCTTTTGGCTGAAAG-AAACCGGTGTTATCATTACTATGTCCATATAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTTGTTTCTGGGACTCCAATTTCCGTCCACAGATGCAGCGCATAGGAGGTTTCAAGGATCGTGAATCAGATGAACGAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACACCTGTAGAGTCATAGGCCTTGTTAGTCTCATGTCCACGGGGACACATGTCCACACATCATCTTTCATACCATAAATACACAGTCGCTCCTCCAGATCTGTGGGGTTTACAGGTGTTTATTGAACCaactataaaccaaaaatattttgagaaaaaaaaatccccgaagttccaaaaccaaaaaaccatgTTGAATGAACACAAATGGAGTGGGGTGTGTAGGCTGTGTCAGGAattataagtaatccagagatgatttCATGTATGCAGGAGGATGTGCATGGGTTATAGGCAATTa i papAnu2.chr19 C 0 I 300 s chlSab2.chr6 47433522 1082 + 50890351 GATC----GTTGTCTCCTGCCCACGAGCACCACAGACAGGCCTGGACGGGGTCTTCTAGGGAGACCACAGCCCTGTCTCAAAACCGGCTTGACAGCTCCAATGTACCAGCAGCTGGAATCTGAAATCTCGACTCTGCATCTTAGAGCATTGCTCTTCCTCACACCACAAATCTG---C---TGGCTCTGTCTTGCTTACCAATGTCTGTGGTTCCCACTGCCTGTTGGAGAGAAAACGCACTCCTTTGCTTAGCCCACAATTGTCCActtcacttgacccctgcccacctctccaacctaactcacttgcttcctagtcctacttgaggctgcagtcacactgaggaactcgcatttccaaacatacaagaggctccctcttaacacagcacttagacgcgtgttgttccaccttccctcatgctgttccacttcctctcagactatttttcagtcttctgtcaTCAGTAAACCTTATAAAAATTT-GTTG-TGATTTCTATTTAGTTCTCTCCTCTTCAAATAAATATGTCTGCCCTCATTCTTTGG-----GT-----GACTCTTTTTTTGCTGAAAG-TTTCCGGTGTTATCGTTACTATGTCCATATAACCCCATCTGTTCTCCACTGGGCTCTCACCCCTGGCATCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTTGTCTCTGGGACTCCAATTTCCGTCCAAAGATGCAGCTCATGGGAGGATCCAAGGATCGTGAATCACATGAACAAGTGATATTCTTACTCACTGCAGACCTGGAAAGCTGGCAGAGTCATTCCAAGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCCTCTCCACGGGGACACATGTCCACACATCATC-TTCATACCATAAATACAcagtcgctcctccggatctgtggggtttacaggtgtttattgagccaaatataaatcaaaaatattcagag---aaaaaatccgcaaagtttcaaaa-agcaaaactgtgttgaatggacacaaatggaat--ggtgtgtaggctgtgccaggaattataagtaatctagagatgatttcatgtagacaggaggatgagcttggattatatgcaaacg i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55627793 6660 + 59248254 T a score=196509.000000 s hg38.chr19_GL949747v2_alt 432939 190 + 729520 ctgtgccatttcatgtaagaggcttgagcatctgcagattgtgctatctgagtggagatcctgagaccaatcacccacgaataatgagggatgactgTATATAATTTTTATTTCTCAATTTTAAATATAAAACATAAAAAAATTACAATAACAAGAT-AAAA-TAAACAAGTG-TTTt-atagtgtgagaatac s panTro4.chr19 59673729 191 + 63644993 ctgtgtcattttatgtaagaggcttgaccatctgcagattttggtatctgagtggagatcctgaaaccaatcacccacgaatagtgaaggatgaccgTATATGACTTTT-TTTCTCAAATTTAAAAATAAATCATAAAAAATGTACAATAACTAGAT-AAAAACTAAGAAGTG-TTTTtatagtgtgagaataa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56684105 188 + 60714840 ctgtgccatttcatgtaagaggcttgagcatctgcagattttgatatctgagtggagatcctgaaaccaatcacccacaaatagtgagggatgactgTATATAACTTTTATTTCTCaattttaaatataaatcataaaaaaattaCAACAACAAGAT-AAAA---AACAAGTG-TTCt-atagtgtgagaatac i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 39984 192 + 40826 ctctgccattttatgtaagaggcttgagcatctgcagattgtggtatctgagcggagatcctgaaaccaatcacccacgaatagtgaaggacgactgTATCTAACTTTTATTTCTCaattttaaatataaatcataaaaaatttaCAATACCAAGATAAAAAAACAAGAAGTG-TTTt-atagtgtgagaatac i rheMac3.chrUn_JH290802 C 0 C 0 s papAnu2.chr19 47707398 192 + 51301725 cTGTGACATTTCACGCAAGAggcttgagcatctgcagattttggtctCTGAatggggatcctggaaccaatcacCCAGGAATAGTAAAGGACAACTGCATATAATTCTTAtttgccaattttaaaaataaagcataaaaaatttacaacaggaaaat-aaaaaataagaagtgttTTT-ATAGTGTGAGGATAA i papAnu2.chr19 I 300 C 0 s chlSab2.chr6 47434604 188 + 50890351 ctgtagcattttacgtaaaaggcttaagcatctgcagattgtggcatctgagccgagatcctgaaaccaatcacccacgaatagtgaagcacgactgTATCTAACTTTTATTTCTCAATTTTAAATATGAATCATAAAAAATTTACAACAACAAGAT----AAAGAAGAAGTG-TTTT-ATAGTGTGAGAATAC i chlSab2.chr6 C 0 I 11974 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55627793 6660 + 59248254 T a score=371560.000000 s hg38.chr19_GL949747v2_alt 433129 387 + 729520 ttttagatatatttttctccatgtgtaaccct-tgggccca-tgttatttattgagaagacattctattccaccttaaaccacatggcagcctttgtcaactataaagggactgtgtgtacacggatgtattttagacactgttttctgctcagtggctctctctctgtccactctcttgagaatgctgcattttatgcagccttatacaacccc-taaaatttggtagctggagtcctctaG-TTATTTATTATAGGCTATTTGCTATGCttttt-ttattttt--cttgaggcagagtctcgctctgttgcccaggctggagtgcagtggcacgatctcggctcactgcaacttctgcctcccaggttcaagggattc-cgtgcctcagcctc s panTro4.chr19 59673920 381 + 63644993 gtttagatttattatttcctatgtgtaaccct-ttggtttaatattatttattgagaagacattctatgccaccttaaaccacacggcagcctttgtcaactctaaagggactgtgtgtacatggatgtagattagacactgttt-ctgctaaagggctctctgt--gtccacactcttgaggatgctacactttatgtagcctcatagaaccct-ttaactttagtagccagagccctctaa-tttgtAATTATAGGCTAtttgct-----tttt-tttttttt--cttgaggcggagtcttgctctgtcgcccaggctggactgcagtggcgcaatctcagctcactgcaacctccacctcccaggttcaagcgattctcgtgcctcagcctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56684293 387 + 60714840 gtttagatttatttttctctatgtgtaaccct-tgggccca-tgttatttattgagaagacattctattccaccttaaaccacacggcagcctttgtcaactataaagggactgtgtgtacacggatgtattttagacactgttttctgctcagtggctctctctgtgtccactctcttgagaatgctgcattttatacagccttatacaaccc--tagaatttggtagctggagtcctctagtttttttattATAGGCTGTTTGTTATGtttttt-tcattttt--cttgaggcagagtctcgctctattgcccaggctggagtgcagtggcatgatctcggctcattgcaacttccgcctcccaggttcaagggattc-cgtgcctcagcctc i ponAbe2.chr19 C 0 C 0 s rheMac3.chrUn_JH290802 40176 374 + 40826 gtgtagatttatttttttctatgcgtaaccct-tgggccca-tgttatctatggagaagacattctattcctccttaaaccacacggcagcctttgtcaACTCTAACGGGACTGTGTGTTCACGGATGTATTTTAGACACTGTTTG------------TCTCTGT--GTTCACTCTCTTGAGGATGCTGCACATTATGTAGGCTTACACAACCCCTTAAAATTTGGTAGCTGGAGTCCTCTAC-TTTTTTATTATAGGCTATTTGCTAGGCTTTTTAAAATAttt--cttgaggcag--tctcactctgtcgcccaggctggactgaagtggcacgatctcagctcaccgcagcctttgcctcctgggttcaagtgattctcctgcctcagcctc i rheMac3.chrUn_JH290802 C 0 N 0 s papAnu2.chr19 47707590 387 + 51301725 GTTTAGATTGATTTTTTCCTACGTGTAACCCTATGGCCCTG-TGTTATTTGTTGAGA----ATTCTATTCCACCTTAAATCACATGGCAGCCTGGGTCAACTGTAAAGGGACTGTGCATCCATGGGTGTATTTTAGACAGTCTTTTCTGCCCAGTGGCTCTCTGT--ATCCCCTCTGATGAGGATGCTACACTTCATGTAACCTTATAGAACCCCTTAAAATTTGGTAACCTGAGTCCTCTGA-TTTGTTATTATAGgttatttagtttgctttttttttttttttccttgagacagactcttcctctgtcacccaagctggatttcagtggcacaagctcagctcactgcaacctccgcctcccaggttcaagcaattctcgtgcctaggcctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47446766 387 + 50890351 gtatagatttatttttttctatgcgtaacgct-tgggccca-tgttatctatggagaagacattctattcctccttaaaccacacggcagtctttgtcaactctaacgggactgtgtgtgcacggatgtattttagacactgttttctgataaggggctctctgt--gttcgctcttttgaggatgctgcacattatgtaggcttatacaaagccttaaaatttggtagctggagtcctttag-tttCTTATTATAGGCTATTTGCTACGCttttt-ttatattt--cttcaggcagagtctcgctctgttacccaggctggactgcagtggcacaatctcggctcactgcaacttccgcctcccaggttcaagcgattctcctgcctcagcctc i chlSab2.chr6 I 11974 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55627793 6660 + 59248254 T a score=340221.000000 s hg38.chr19_GL949747v2_alt 433516 496 + 729520 ttgaatagctggcattacaagtgcctgctaccaggcatggctaatttttgtatttttagcagagacatggtttcactatattggccaggctggtctcaaactcctgacctcggttgatc-actcacctcggcttccaaa-gtgctgggGAAA--TTGATTTTCTATAGCATTATGTTACTGGATATTTCTGTAAAATTTAAAATgagggaggcagagagacagagagagagCAAAC-CATGAGTTGGAACTCTGGAATCTTGGGACATGAGACAAATTCTAGATAAATCTACAAAAATCCAGAATTTACATGTTGTGATTTTTGCTGATAAAGTACAATTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAGTTTAAATCATTTGAACTGGTTCTGCTGTAATACTAGAAATACAATCATGAAAAATTCTAATGGTTTATTAGTCACAATTGCTCTGAAAACCTTAATAATACCTATTAGATATTTTGCATATTA s panTro4.chr19 59674301 500 + 63644993 ttaagtagctggcattacaggtgcctgccaccaggcatggctaatttttggatttttagcagagacacggtttcactgtgttggccaggctgctctcaatctcctcatctcagttcgtccgcccacctcggcttcccgacgtgctgggGGAAACTTGATTTTCTATAGCATTATGTTACTGGATATTTCTGTAAAATTTAAAATGAGGGAGGGAGAGAGACAGAGAGAGAGCAAACTCCAGAGTTGGGACTCTGGAATCTTGGGTCATGAGACAAATTTTAGATAAAACTACAAAAATCCAGAATTTACATGT-GTGGTTTTTGCTGATAACATACAATTCTAAGATTGTAAATAACTGCATAATCCTTCCCTGGGAGTTTAAATCATTTTAACAGGTTGTGCTGTAATACTAGAAATACAAGCATGAACAATTCTAATGGTTTATTAGTCACAATGACTCTGAAAACATTAATAATACCTATTAGATATTTTGCATATTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56684680 496 + 60714840 ttgaatagctggcattacaggtgcctgctaccaggcatggctaatttttgtatttttagcagagacacagtttcactatattggccaggctggtctcaaactcctgacctcggttgatc-gcccacctcggcttccaaa-gtgctgggGAAA--CTGATTTTCTATAGCATTATGTTACTGGATATTTCTGTAAAATTTAAAATGAGGGAGGCAGAGAGACAGAGAGAGAGCAAAC-CATGAGTTGGAACTCTGGAATCTTGGGTCATGAGACTAATTTTAGATAAAACTACAAAAATCCAGAATTTACATGTTGTGATTTTTGCTGATAAAGTACAATTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAGTTTCAATCATTTTAATTGGTTCTGCTGTAATACTAGAAATACAAGCATGAAAAATTCTCATGGTTTATTAGTCACAATTACTCTTAAAACCTTAATAATACCTATTAGATATTTTGCATATTA i ponAbe2.chr19 C 0 N 0 s papAnu2.chr19 47707977 491 + 51301725 ttgagtagctgggagtacaggtgcccgccaccaagccccactaacttttgtatttttagcagagacagggttgaaccatgttggccaggctggtcttgaactgccgacctcaagtgatccacccacctctgcctcccaaagtgctgggggaagCTTGATTTTCTATCGTAT--TGTTACTGGACAttcctataaaatttaaaatgagggagggagagagac----agagagcaaac-CATGAGTTTGGAATCTGGAATCTTGGGTCATGAGACAAATTCTAGATAAAATGAC-AAAATCCAGAATTTACTTGTTGTGTTTTCTGCTAATAAAGTGGGATTCTAAGATCATAAATAACTGCATAATCCTTCACTGTGAATTTAAATCATTTTCACTCCTTCTGGGTTAGTACTAgaaattcaagaaggaaa-attaGACTGACTT-TTTGTCACAATTACTCTGATAATGTTAATAGTATCTGTTAGATATTTTGCACATTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47447153 500 + 50890351 ttgagtagctggcatgacaggtgcccactgccaggcatggctaatttttgtatgtttagcagagacatggtttctctaagttggccagggaggtctcgaactcccgacctccgttgatccacccacctcggcttcccaaagtgctgggGGACACTTGATTTCCTACAGTATTATGTTACTGGATATTTCCACACAATTTAAAATgagggaggcagagagacagagagagagcgaAC-CATGTGCTGGGACTCTGGAATCTCAGGTCATGAGACAAATTGTAGATAAAATGACAAAAATCCAGAATTGACATGTTGTGGGTTTTGCTGATAAAGAACAGTTCTAAGACTGTAAATAATTGCATAATCCTTCCCTGGGTATTTAAATCATTTAAACTGGTTCTGCTGTCATACTAGAAATACAAGCATGAAACATCCTAATGGTTTATTCGTCACAATTGCTCTGACAACGTTCATAATACCTATTAGATATTTTGCATATTA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55627793 6660 + 59248254 T a score=1910.000000 s hg38.chr19_GL949747v2_alt 434012 2 + 729520 CA s panTro4.chr19 59674801 2 + 63644993 CA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56574977 2 + 60714840 cA i ponAbe2.chr19 N 0 C 0 s papAnu2.chr19 47708468 2 + 51301725 CA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47447653 2 + 50890351 CA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55627793 6660 + 59248254 T a score=4109.000000 s hg38.chr19_GL949747v2_alt 434014 5 + 729520 CAGGA s panTro4.chr19 59674803 5 + 63644993 CAGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56574979 5 + 60714840 CATGA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55621133 5 + 59248254 CATGG i macFas5.chr19 T 6660 C 0 s papAnu2.chr19 47708470 5 + 51301725 CATGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47447655 5 + 50890351 CACGG i chlSab2.chr6 C 0 T 74242 e calJac3.chr22 45773030 20261 + 49145316 I a score=469195.000000 s hg38.chr19_GL949747v2_alt 434019 419 + 729520 AGAAGAGTTTGAATCTCAGATAAAAGCAATAAAAATACATGAAAAGTCTTTCATGTTAGCACAGATTTTAGGCATCTCGTGTTCAGGAGGTTGGATCTGAGACGTGTTTTGAGTTGGTCATAGTGAAGGACGCGAGGTGTCAATTCTAGTGAGAGCAATTTCCAGGAAGCCATGCTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAACATGTAAACTGCAT-----GGGCAGGGCGCCAAATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCAGCCGCCTGTCTGCACCGGCAGCACCATGTTGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATCGAGGGAGGGAGTGCGGGG s panTro4.chr19 59674808 419 + 63644993 AGAAGAGTTTGAATCTCAGATAAAAACAATAAAAATACGTGAAAACTCTTTCATGTTATCACAGATTTTAGGCATCTCATGTTTGGGAGGTTGGATCTGAGACATGCTTTGAGTTGGTCATAGTGAAGGACACTAGGTGTCAATTCTAGTGAGAACAATTTCCAGGAAGCCATGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAGCATGTAAACTGCAT-----GGGCAGGGCGCCAAATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCATCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATAGAGGGAGGGAGTGCGGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56574984 413 + 60714840 AGAAGAGTTTGAATCTCAGATAAAAACAACAAAAATACATCAAAAGTCTTTAATGTAAGCCAAGCATTCAGTCATCTCCTGTATGAGATATTGGATCTGAGACGTGTTTTGAGTTGGTAATAGTGAAGGATGCAAGGTGTCAATTCTAGTCGGAACAATTTCCA-GAAGCCATATTCCGCTCTTGACCAAACAGCCACTGGGCCTCATGCAAGGTAGAAATAGCCTGCATACGTCATCCTCCCATGATGTGGTCAGCATGGAAACTGCAT-----GAGCC-----CCTCACAACATCCTGTGTGCTGCTGAACTGAGCTGGGGCGCAGCCGCCTGTCTGCACAGGCAGCACCATGTCACTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATCGAGGGAGGGAGCGCTGGG i ponAbe2.chr19 C 0 N 0 s macFas5.chr19 55621138 414 + 59248254 AGAAGAGTTTGAATCTCAGAAGAAAACAACAAAAATACGTCAAAAGTCTTTCATGTCAGCACAAAATTCAGTCATCTCCTGTATGAGAGATTGGATCTGAGACGTGTTTTGAGTTGGCAATAGTGAAGGATGCAAGGTGTCAATTCTAGTTGGAACAATTTCCAGGAAGCCATGTTCCACTCTTGAGCAAACAACCACTGGGCCTCATGCAAGGCAGAAAGAGCCTGTGTACGTCATCCTCTCATGATGTGGTCAGCATGTCAACTGCAT-----GAGCC-----CCTCACAACATCCTGTGTGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCATCAGCATGGCATGTGTTGGTGAGTCCCAGAAGGGAATCGAGGGAGGGAGCACTGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47708475 417 + 51301725 AGAAGAGTTTgaatctcagataaaaacaacaaaaatacatcaAGAGTCTTTAATGT-AACCCAGAATTCCATCATCTTGTGTTGGAAAGATTGGATCTGAGACGTGTTTTGAGCTGGTCATAGTGAATGAAGCAAGGTGGCAATTGTAGTCACAACAATTTCCAGGAAGCCATTTTCTGCTCTTGGCTAGAGGCCCGCTGGGCGTCATGCAAGGTACGAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAGCATGTCAACTGCACAGGCAGGGCG-----CCAGATAACATCCTGTGCACTGCTGAACTGAGCTGGGGCACGGCCGCCTGTCTGCACCAGCAGCACCATGTCGCTCATGGTCATCAGTGTGGCGTGTGTTGGTGAGTCCTGGAAGGGAATTCATGGAGGGAGCACT-GG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47373418 414 + 50890351 AGAAGAGTTTGAATCTCAGAAGAAAACAACAAAAATACGTCAAAAGTCTTTCATGTCAGCACAAAATTCAATCCTCTCCTGTATGAGAGATTGGATCTGAGACGTGTTTTGAGTTGGTAATAGTGAAGGATGCAAGGTGTCAATTCTAGTCGGAACAATTTCCAGGAAGCCATGTTCCACTCTTGAGCAAACACCCACTGGGCCTCGTGCAAGGCAGAAAGAGCCTGTGTACGTCATCCTCTCATGATGTGGTCAGCATGTCAACTGCAT-----GAGCC-----CCTCACAACATCCTGTGTGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCATCAGCATGGCGTGTGTTGGTGAGTCCCGGAAGGGAATCGAGGGAGGGAGCACTGGG i chlSab2.chr6 T 74242 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=58990.000000 s hg38.chr19_GL949747v2_alt 434438 75 + 729520 ATGGAGATCTGGACCTGGAGGTAAAGATATGGGCCTAGAGGTGGAGTTATGGGCCTGGAGGTGGAGTTATGGGCC s panTro4.chr19 59675227 74 + 63644993 ATGGAGATCTGGGCCCAGAGGTGGAGATCTGGGCCTGGA-GTGGATTTATGGGCCTAGAGATGGAGTGATGGGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685602 75 + 60714840 GAATAGATCTGGAGTTGGAGGTAAAGATATGGGCCTAGAGGTGGAGTTATGGGCCTGGAAGTGGAGTTATGGGCC i ponAbe2.chr19 N 0 N 0 s macFas5.chr19 55621552 54 + 59248254 GTGGATATCTGGGCCTGGAGGTAAAGATATGGGCCT-GAGGTGGAGATAC--------------------GAGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47708892 75 + 51301725 GTGGAGATCTGGGCCCGGAGGTGGAGATATGGGCCTAGAGGTGAAGATACGGGTCTAGAGGTGGCGttatgggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47373832 73 + 50890351 Gtggatatctgggcctggaggtaaaggtataggcct-gaggtggagatataggcctggA-GTGGAGATATGGGCC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=-278.000000 s hg38.chr19_GL949747v2_alt 434513 4 + 729520 T-GAA s panTro4.chr19 59675301 5 + 63644993 TAGAA i panTro4.chr19 C 0 C 0 s macFas5.chr19 55621606 4 + 59248254 -TGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47708967 4 + 51301725 -tgga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47373905 4 + 50890351 -TGGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=10169.000000 s hg38.chr19_GL949747v2_alt 434517 9 + 729520 GTGGAGATC s panTro4.chr19 59675306 9 + 63644993 GTGGATATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575397 9 + 60714840 GTGGAGATC i ponAbe2.chr19 N 0 C 0 s macFas5.chr19 55621610 9 + 59248254 GTGGAGATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47708971 9 + 51301725 gtggagatc i papAnu2.chr19 C 0 I 491 s chlSab2.chr6 47373909 9 + 50890351 GTGGAGATA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=91566.000000 s hg38.chr19_GL949747v2_alt 434526 125 + 729520 TGGGCCTGGAGTGGAGATCTGGGCCTGGAG-TGGAGATAGGGGCCTGGGGTGGAGATATGTGCCT-------------------------GGAG-TGGAGATCTGGGCCTGGAG-TGGAGAT------------------------------------------ATGGGCCTGG-GGTGGAGATA-----------------------------TGTGCCTGG-GG s panTro4.chr19 59675315 127 + 63644993 TGGGCCTGGAGTGGAGATAGGAATCTGGAA-GGGAGATAGGAGCCTGGACTGGAGATATTGGCCT-------------------------GGGG-TGGACATATGAGACTGGAG-TGGAGAC------------------------------------------ATGGGCCTGGAGGTGGAGATA-----------------------------TGGGCCTGGAGG i panTro4.chr19 C 0 T 32459 s ponAbe2.chr19 56575406 213 + 60714840 TGGGCCTCGAGTGGAGATATGGGCCTGGAG-TGGAGATATAGGCCTGGAGTGGAGATATAGGCCTGGAGTGGAGATCACTCTTGGTCACGGGGG-TGGAGATATGAGCCTGGAA-TGGAGACGTGGCCTTTGACGTAGAGATATGGGCCTGCACCCCCGAGATAGTGGGCCTGGAACTGTAGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG---------- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55621619 126 + 59248254 TGGGCCTGGAGTGGAGATATGGGCCTGGAG-TGGAGATATGGGCCTGGGGTGGAGATATGAGCCT-------------------------GGAG-TGGAGACATGGGCCTGGAGCTTTAGAT------------------------------------------ATGGGCCTGG-AATGGAGATA-----------------------------TGGGCCTGGAG- i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47709471 125 + 51301725 tgggcctggagtggagataagggcctgggg-tggagatatgaacctggagtggagatatgagcct-------------------------ggag-tggagatttgggcctggag-tggagat------------------------------------------atgggcctgg-aaTGAAGATA-----------------------------TGGGACTGGAG- i papAnu2.chr19 I 491 C 0 s chlSab2.chr6 47373918 127 + 50890351 TGAGCCTGGAGTGGAGACATGGGCCTGGAGCTTTAGATATGGGCCTGGAATGGAGATATGGGCCT-------------------------GGAGATAGAGATATGGGCCTGGAG-TGGAGAT------------------------------------------ATTGTCTTGG-AGTGCAAATA-----------------------------TGTACCTGGAA- i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=36557.000000 s hg38.chr19_GL949747v2_alt 434651 32 + 729520 TGGAGATATGGGCCTGGA-GGGGAGATATGGGC s panTro4.chr19 59642983 32 + 63644993 TAGAGATATGGGCCTGGA-GTGGAGATATTGGC i panTro4.chr19 T 32459 C 0 s ponAbe2.chr19 56575619 32 + 60714840 TGGAGATATGGGCCTGGA-GTGGATATATGGGC i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55621746 32 + 59248254 TAGAGATATGGGCCTGGA-GTGGAGATACTGGT i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47709596 32 + 51301725 TGGAGATAtgagcctgga-gtggagatatgggc i papAnu2.chr19 C 0 I 228 s chlSab2.chr6 47374045 33 + 50890351 TGGAGATACGGGCCTGGAGGTGGAGATATGGGC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=5158.000000 s hg38.chr19_GL949747v2_alt 434683 13 + 729520 -CTGGAGGGGAGAT s panTro4.chr19 59643015 13 + 63644993 -TTGGAGTGCAGAT i panTro4.chr19 C 0 I 60228 s ponAbe2.chr19 56575651 13 + 60714840 -CTGGACTGTAGAT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47709856 14 + 51301725 CTAGAGGTGGAGAT i papAnu2.chr19 I 228 C 0 s chlSab2.chr6 47374078 14 + 50890351 CTGGAACTGTAGAT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55621778 0 + 59248254 C a score=5998.000000 s hg38.chr19_GL949747v2_alt 434696 40 + 729520 GTGGGCCTAGAGGTGGAGTGATGGGC--------------------CTAGAAGTGGAGCG s panTro4.chr19 59703256 38 + 63644993 atgggtctgga-gtggagatatgggc--------------------ct-gaagtggagat i panTro4.chr19 I 60228 T 60266 s ponAbe2.chr19 56575664 39 + 60714840 ATGGGCCTGGA-GTGGAGATATGAGC--------------------CTGGAGGTGGAGAT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55621778 13 + 59248254 ----------------------------------------------TT-GGAATGCAAGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47709870 59 + 51301725 ATGGGCCTAGAGGTGGAGATACGGGTCTAGAGGTGGTGttatgggcct-ggagtggagat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47374092 19 + 50890351 ATGGGC----------------------------------------CT-GGAGTGGAGAT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=8195.000000 s hg38.chr19_GL949747v2_alt 434736 12 + 729520 ATGGGCCTGGAG- s panTro4.chr19 59643028 12 + 63644993 ATGGGCCTGGAA- i panTro4.chr19 T 60266 I 32402 s ponAbe2.chr19 56575703 12 + 60714840 ATGGGCCTGGAG- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55621791 12 + 59248254 ATGGGCCTGGA-A i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47709929 13 + 51301725 ctgGGCCTAGAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47374111 13 + 50890351 ATGGGCCTGGAAC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=80672.000000 s hg38.chr19_GL949747v2_alt 434748 77 + 729520 TGGAGATATGGGCCTGGAGGTGGAGTTATGGGCCTGCAGTAGAGATATGGGCCTGAAG-TGGAGATATGGGCCTGGAG s panTro4.chr19 59675442 77 + 63644993 TGGAGATATGGGCCTGGAGGTGGAGTTACGGGCCTCTAGTAGACATACGGGCCTGGAG-TGGAGACATGGGCCTGGAG i panTro4.chr19 I 32402 C 0 s ponAbe2.chr19 56575715 77 + 60714840 TGGAGATATGGGCCTGGAGGTGGAGATTTGGGCCTGGAGTGGAGATATGGGCCTGGAG-TGGAGATACGGGCCTGGAG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55621803 78 + 59248254 TGAAGATACAGGCCTGGAGGTGGAGATATGAGCCTGGAGTGAAGATATGAGCCTAGAACTGTAGATATGGGCCTGGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47709942 77 + 51301725 TGGAGATACAGGTCTAGAGATGGAGttatgggcctggagtggagatctgGGCCTTGAG-TGGAGATAtgagcctggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47374124 78 + 50890351 TGTAGATATGGGCCTGGAGGTGGAGATATGGGCCTAGAGTATAGATATGGGCCTGGAACTGTAGATATGGGTCTGGAG i chlSab2.chr6 C 0 I 15895 e calJac3.chr22 45773030 20261 + 49145316 I a score=16724.000000 s hg38.chr19_GL949747v2_alt 434825 20 + 729520 TGGAGATATGGGCCTAGAGG- s panTro4.chr19 59675519 19 + 63644993 TGGAGATATGGGCCTGGAG-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575792 19 + 60714840 TGGAGATATGGGCCTGGAA-- i ponAbe2.chr19 C 0 N 0 s macFas5.chr19 55621881 20 + 59248254 TGAAGATATGAGCCTAGAA-C i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47710019 20 + 51301725 tggagatatgggtCTAGAG-G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47390097 20 + 50890351 tggagatatgggtctagag-g i chlSab2.chr6 I 15895 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=7912.000000 s hg38.chr19_GL949747v2_alt 434845 34 + 729520 TGGAGTTATGGGCCCGGAGGTGGAGTTAAGGGCA s panTro4.chr19 59675538 34 + 63644993 TGGAGATATGGGCCTGGAGGTGGAGATATGGGCC i panTro4.chr19 C 0 C 0 s macFas5.chr19 55621901 14 + 59248254 TGTAGA--------------------TATGGGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47710039 34 + 51301725 TGGAGATATGGGTCTACAGATGGAGttatgggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47390117 14 + 50890351 tggaga--------------------tatgggcc i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=29483.000000 s hg38.chr19_GL949747v2_alt 434879 36 + 729520 T-GAA-GTGGAGATCTGGGCCTGGA-GTGGAGATATGAT s panTro4.chr19 59675572 37 + 63644993 TAGAG-GTGGATATCTGGGCCTGGA-GTGGAGATATGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685677 36 + 60714840 -TGAA-GTGGAGATCTGGGCCTGGA-GTGGAGATATGAT i ponAbe2.chr19 N 0 C 0 s macFas5.chr19 55621915 36 + 59248254 -TGGA-GTGGAGATATGGGTCTGGA-GTGGAGATACTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47710073 36 + 51301725 -tgga-gtggagatctgggcctgga-gtgggGTTATGAT i papAnu2.chr19 C 0 I 485 s chlSab2.chr6 47390131 38 + 50890351 -tagaggtggaggtatgggtctagaggtggaggtatggG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=7253.000000 s hg38.chr19_GL949747v2_alt 434915 7 + 729520 CCTGGAG s panTro4.chr19 59675609 7 + 63644993 CCTAGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685713 7 + 60714840 CCTGGAG i ponAbe2.chr19 C 0 N 0 s macFas5.chr19 55621951 7 + 59248254 CTTGGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47710594 7 + 51301725 cctggag i papAnu2.chr19 I 485 C 0 s chlSab2.chr6 47390169 7 + 50890351 CCTGGAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=31672.000000 s hg38.chr19_GL949747v2_alt 434922 27 + 729520 TGGAGATATGGGCCTGGG-GTGGAGATA s panTro4.chr19 59675616 28 + 63644993 TGGAGATATGGGCCTGGGTGTGGAGATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575812 27 + 60714840 TGTAGATATGGGCCTGGA-GTGGAGATA i ponAbe2.chr19 N 0 C 0 s macFas5.chr19 55621958 27 + 59248254 TGCAAATATGGGCCTGGA-ATGGAGATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47710601 27 + 51301725 tggagatatgggcctggg-gtggagata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47390176 27 + 50890351 TGGAGATATAGGCCTGGA-GTGGAGATA i chlSab2.chr6 C 0 I 91038 e calJac3.chr22 45773030 20261 + 49145316 I a score=87746.000000 s hg38.chr19_GL949747v2_alt 434949 134 + 729520 CGGGCCTGG-AGCAGACATACAAGCCTGGAAAGGAGATATGGGCCTGGAGA-------------------GGAGATAGAAGCCTGGAG-TGGAAATATGGGCCTGG-agtggagatatgagcctggag-tggatatatgagcctgg-agttgagatag s panTro4.chr19 59675644 115 + 63644993 TGGGACTGG-AGT-------------------GGAGATATGGGCCTGGAGT-------------------GGAGATATGGGCTTGGGG-TGGATATCTGGGCCTGG-GTTGGAGATAAGGGCCTGGAT-TGGAGATATGGGCCTAG-GGTGGAGATCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575839 118 + 60714840 TGGGCCTGG-AAC------------------TGTAGATATGGGCCTGGAGT-------------------GGAGATATAGGCCTGGAG-TGTAGATATGGGCCTGGAGGTAGACATATGGGCCTGGAG-TGGAACTATGAGCCTGGAGGTGGAGATAT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55621985 118 + 59248254 CGGGCCTGGAGGT-------------------GGAGATATGGGCCTAGAGT-------------------GTAGATAGGGGCCTGGAACTGTAGATATGGGCCTGG-AGTGAAGATATGAGCCTGGAACTGTAGATATGGGCCTGG-AGTGGAGATAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47710628 135 + 51301725 tgggcctgg-gat-------------------GGAAATATGGGCCTAGAGTGGAGATCTGGGCCAGGAGGGGAGATATGGGTCTAGAGgtggagttatgggcctgg-agtggagatatgggcctggag-tggagatatgggcctgg-agtggagatct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47481241 134 + 50890351 GAGGCCTGG-AGT-------------------GGAGATAGGATCCTGCAGTGGAGATATGAGCATGGAGAGGAGATGGGAGCCTGGAG-TGGACATATGGGACTGG-GGTGGAGATATGAACCTGGAG-TGCAGATATTAGCCTGG-AGGGGAGATAT i chlSab2.chr6 I 91038 T 33021 e calJac3.chr22 45773030 20261 + 49145316 I a score=30206.000000 s hg38.chr19_GL949747v2_alt 435083 29 + 729520 gagcctggagtggagatatgggcctggag s panTro4.chr19 59675759 29 + 63644993 GAGCCTGGATTGGAGATACGGGCGTAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575957 29 + 60714840 GGGCCTGGAGTGGAGATATGGGCCTGGAG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55622103 29 + 59248254 GGGTCTGGAGTGGAGATATGGGCCTGGAG i macFas5.chr19 C 0 I 8 s papAnu2.chr19 47710763 29 + 51301725 ggacctggagtggagatatgggccaGGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47448354 29 + 50890351 TAGCCTGGATTGGAGATAAGGGTTTGGAG i chlSab2.chr6 T 33021 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=1910.000000 s hg38.chr19_GL949747v2_alt 435112 2 + 729520 tg s panTro4.chr19 59675788 2 + 63644993 TG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575986 2 + 60714840 TG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47710792 2 + 51301725 tg i papAnu2.chr19 C 0 I 192 s chlSab2.chr6 47448383 2 + 50890351 TG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55622132 8 + 59248254 I a score=1090.000000 s hg38.chr19_GL949747v2_alt 435114 2 + 729520 ga s panTro4.chr19 59675790 2 + 63644993 GC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575988 2 + 60714840 GA i ponAbe2.chr19 C 0 N 0 s papAnu2.chr19 47710986 2 + 51301725 GA i papAnu2.chr19 I 192 C 0 s chlSab2.chr6 47448385 2 + 50890351 GA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55622132 8 + 59248254 I a score=707.000000 s hg38.chr19_GL949747v2_alt 435116 4 + 729520 ctta s panTro4.chr19 59675792 4 + 63644993 GATA i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47710988 4 + 51301725 Gtta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47448387 4 + 50890351 GATA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55622132 8 + 59248254 I a score=148502.000000 s hg38.chr19_GL949747v2_alt 435120 245 + 729520 tcagcctggagaggagatATGGGTCTGGAGTGGAGATACGGACCTGGAGTGGAGATCTGGGCCTGTTGTGTAGATCTAGGCCTGGAGGTAGAGATCTGGGCCTGGAGGCTGAGTCTCTGCACAGCCGAGATCCTTGTTCCTGGGGGCAGGTAGGCAGCGAGGGTGAGTTTACCTTCAGCCCAGCAAGGGCCTGGCTGCCAAGACGCACAACCCAGTGGGGGCAGCA-GGGTGC-CCTGGTTTGCCTG s panTro4.chr19 59675796 226 + 63644993 TGGGCTTAGGGTGGAAATATAGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCTTG--------------------GGGCGGGGATATGGACCTGGAGGCTGGGTCTCTGCACAGCCGACAGCCCTGTTCTTGGGTGCAGGTAGGCACTGAGGGTGAGTTTACCTTCGGCCCTGCAGAGGCCTGGCTGCCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGAGG-CCTGGTTTGCCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685879 227 + 60714840 ------------------TCAGACCTGAAGTGGAGATCTGGGCCTAGAGCGGAGATCTGGGCCTGTTGTGTAGATCTAGGCCTGGAGGTAGAGATCTGGGCCTGGAGGCTGAGTCTCTGCACAGCTGAGATCCTTGTTCCTGGGGGCAGGTAGGCAGCGAGGGTGAGTTTAACTTCAGCCCAGCAAGGGCCTGGCTGCCAAGACACACAGCCAAGTGGGGGCAGCA-GGGTGC-CCTGGTTTGCCTG i ponAbe2.chr19 N 0 N 0 s papAnu2.chr19 47710992 245 + 51301725 tgggcctggagtggagatatgggcctggagtggagatacgGGCCTGGGATGGAAATATGGGCCTagagtggagatatgggcctgga-gtggagatctgggcctggaggCCGGGTCTCTGCACAGATGAGAGCCCTGTTCTTGGGGGCAGGTAGGCAGAGAGTGTGAGTTTACCTTCAGCCCAGGAAAAGCCTGGCTGCCAAGACTGACAGCCCAGTGGGGGCAGCAAGGGAGG-CCTGGTTTGCCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47448391 244 + 50890351 TGAGCCTGGAGTACAGATATGAGCCTGGAGTGGAGATATCAGCATGGAGCGGACATGTGGGCCTGTTGTGTAGATCTAGGCCTCG--GTGCAGATCTGGATCCGGAGGCTGGGTCTCTGCACAGCTGACATCCCTGCT-GCGGGGGCAGGTAGGCAGCCAGGGTGAGTTTACTTTCAGCCCAAAAAGGGCCTGGCTGCCCAGACGCACAGCCCCGTGGGGGCAGCAGGGGAGGCCCTGGTTTGCCTG i chlSab2.chr6 C 0 T 74406 e calJac3.chr22 45773030 20261 + 49145316 I e macFas5.chr19 55622132 8 + 59248254 I a score=152945.000000 s hg38.chr19_GL949747v2_alt 435365 129 + 729520 CAGATGGATGGTCCATCATGATCTTTCTTTCTAGGGTTGTTCTTGGTCCAGAGGGCCGGTCCACACATGGGTGAGTCCTTCCCCAAACCTTAGGGTGTCATCTCCCCACATAAGAGGATTTTCCTGAAA s panTro4.chr19 59676022 129 + 63644993 CAGATGGATCATCCATTATGATCTTTCTTTCCAGGGTTCTTCTTGATGCAGGGGGCCTGGCCACACATGGGTGAGTCCTTCTCCGAACCTTAGGGTGTCATCTCCCCACATAAGAGGATTTTCCTGAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56576013 129 + 60714840 CAGATGGATCACCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCAGGCCACATGTGTGTGAGTCCTTCCTCAAACCTTAGGTTGTCATCTCCCCACATAAGATGATTTTCCTGAAA i ponAbe2.chr19 N 0 C 0 s macFas5.chr19 55622140 129 + 59248254 CAGATGGATCATCCATCATGATCTTTCTTTATAGGGTTCTTCTTGCTGCAGAGGGCCTGGTCACATGTGGGTGAGTCCTTCTCCAAACCTTAGGTTGTCATCTCCCCACATAAGATGATTTTCTTGAAA i macFas5.chr19 I 8 C 0 s papAnu2.chr19 47711237 129 + 51301725 CAGATGGATCGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGAGGGCCTGGCCACATGAGGGTGAGTCCTTCCCCAAACGTTAGGGTGTCCTCTCTCCATGTAAGAGGATTTTCCTGAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47374229 129 + 50890351 CAGATGGATCATCCATCATGATCTTTCTTTATAGGGTTCTTCTTGCTGCAGAGGGCCTGGTCACATGTGGGTGAGTCCTTCCACAAACCTTAGGTTGTCATCTCCCCACATAAGATGATTTTCTTGAAA i chlSab2.chr6 T 74406 I 74406 e calJac3.chr22 45773030 20261 + 49145316 I a score=-1367.000000 s hg38.chr19_GL949747v2_alt 435494 7 + 729520 TGGGA--------------------------------------GG s panTro4.chr19 59676151 7 + 63644993 CCGGA--------------------------------------GG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56576142 7 + 60714840 TGGGA--------------------------------------GG i ponAbe2.chr19 C 0 N 0 s macFas5.chr19 55622269 45 + 59248254 CATGAGGCAGGCAGCACAAGGGGTTGACTGATGGGATGACGATGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47711366 7 + 51301725 CAGGA--------------------------------------GG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47448764 7 + 50890351 CAGGA--------------------------------------GG i chlSab2.chr6 I 74406 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=142967.000000 s hg38.chr19_GL949747v2_alt 435501 151 + 729520 GAAGTCCTGTCGGGGAGTCTCTCATACACTAGGAAGAGGGGACCCTCGGATGCTCGGCCCACATTTCTGACCTTGCCCTCCCCGGCCTTTCTTTCCCTTTCCTGAGTCAAGCTCTGTGAAGACTG-GGGTGAGACTAGGGTGCTCCAAGATG s panTro4.chr19 59676158 150 + 63644993 GAAGTCCTGTCAGGGAGTCTCTCATAAACTAGGAAGAAGGGACCCTCGGATGCTCCGCCCACAGTTCTGACCTCGCC-TCCCTGGCCTTTCATTCCCTTGGCAGAGTCAAGTCCTGTGGGGACCA-GGGTTACACTAGGGTGCTCAAAGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56686242 151 + 60714840 GAAGTCCTGTCGGGGAGTCTCTCATAAACTAGGAAGAGGGGACCCTCGGATGCTCGGCCCATAGTTCTGACCTCGCCCTCCCCAGCCTTTCTTTCCCTTTCCTGATTCAAGCTCTGTGAAGACTG-GGGTGACACTGGGGTGCTCCAAGCTG i ponAbe2.chr19 N 0 N 0 s macFas5.chr19 55622314 144 + 59248254 GAAGCCATGT--GGGAATCTCTCATGAACTAGGAAAAGGAAGCCATGGGAAGCTTGGCCCACAGTTCTGTCCTAGCCCTCCCTGTTCTTTCTTTCCCTTGGCTGAG------TCTGTGGGGACCCTGGGGGAGACTGGAGTGCTCAAAGCAG i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47711373 151 + 51301725 GAAGTCCTGTCCAGGAGTCTCTCATCAATTAGGAAGAGGGGACGCTCGGATACTCAGCCCACAGTTCTGACCTCGCCCTCCCCAGCCTTTCTTTCCCTTGGCAGAGTCAAGTTCTGTGGGGACCA-GGGTAAGACTGGGGTGCTCAAAGCTG i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47448771 151 + 50890351 GAAGTCCTGTCAGAGAGTCTCTCATACAATAAGAAGGGGGGACCCTGGGGTGCTCGGCTCACACTTCCGACCTCGTCCTCTCTGGCCTTTCTTACCCTTGGCTGAGTCAAGCTCTGTGAAGACCG-GGGTGAGCTTGGGGTGCTCCAAGCTG i chlSab2.chr6 C 0 T 74374 e calJac3.chr22 45773030 20261 + 49145316 I a score=18181.000000 s hg38.chr19_GL949747v2_alt 435652 19 + 729520 GG-TGTGCAGGGAGGAAGTG s panTro4.chr19 59676308 20 + 63644993 GGGTGTGTGGTGGGGAAGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56576331 19 + 60714840 GG-TATGCGGGGAGGAAGTG i ponAbe2.chr19 N 0 C 0 s macFas5.chr19 55622459 19 + 59248254 AG-TGTGTGGGGAAGAAGTG i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47711525 19 + 51301725 GG-TGTGGAGGGGGGAAGTG i papAnu2.chr19 I 1 T 17725 s chlSab2.chr6 47374548 19 + 50890351 GG-TGTGCGGGGAAGAAGTG i chlSab2.chr6 T 74374 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=2210.000000 s hg38.chr19_GL949747v2_alt 435671 2 + 729520 GT s panTro4.chr19 59676328 2 + 63644993 GT i panTro4.chr19 C 0 I 91566 s ponAbe2.chr19 56576350 2 + 60714840 GT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55622478 2 + 59248254 GT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47693819 2 + 51301725 GT i papAnu2.chr19 T 17725 C 0 s chlSab2.chr6 47374567 2 + 50890351 AT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=37275.000000 s hg38.chr19_GL949747v2_alt 435673 31 + 729520 GTCAGCAGCAGAGAAAGAGAGGGAAGCAGTG s panTro4.chr19 59767896 31 + 63644993 GTCAGCAGCAGAGAAAGAGAGGGAAGCAGTA i panTro4.chr19 I 91566 C 0 s ponAbe2.chr19 56576352 31 + 60714840 GTCACCGGCAGAGGAAGGGAGAGAAGCAGTG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55622480 31 + 59248254 GTCACCGACAGAGGAAGGGAGGGAAGCAGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47693821 31 + 51301725 GTCACCagcaaaggaagggagggaagcagtG i papAnu2.chr19 C 0 I 17692 s chlSab2.chr6 47374569 31 + 50890351 GTCACCGGCAGAGGAAGGGAGGGAAGCAGTG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=-3330.000000 s hg38.chr19_GL949747v2_alt 435704 2 + 729520 -CT s panTro4.chr19 59767927 2 + 63644993 -CT i panTro4.chr19 C 0 T 91599 s ponAbe2.chr19 56576383 2 + 60714840 -CA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55622511 1 + 59248254 -C- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47711544 2 + 51301725 CT- i papAnu2.chr19 I 17692 C 0 s chlSab2.chr6 47374600 1 + 50890351 -C- i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=166425.000000 s hg38.chr19_GL949747v2_alt 435706 159 + 729520 AGGAACAGCAGGTCCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGCGTTTCCGTGAT-GGTAGGGGCTGCAGTGTGGCTGCGGTCTTTCTACCAGAAAAGGTG-AGGAAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCAGTT------------- s panTro4.chr19 59676330 158 + 63644993 AGGAACAGCAGATCCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCGTTTCCATGAC-GGTAGGGGCTGCAGTGTGGCTGCTGTCACTGCACCAGAAGAGGTG--GGAAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCAGTT------------- i panTro4.chr19 T 91599 I 30 s ponAbe2.chr19 56576385 159 + 60714840 AGGAACAACAGG-CCTCTGAGGACAAGAGCATAACTCACACTCTCCAGCGTTTCCATGACGGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTG-GGGGGACCACAGTCATGACCCTGACATTCCAGATCTTCTAATAGGGGCTCAGTT------------- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55622512 172 + 59248254 AAGAACAGCCAG-CCTCTGAGGACAAGAACGTAACTCACACCCTCCAGTGTTTCCATGAT-GGTCGGGGCTGCAGTGTTGCCGCTGTCATTCTACCAGAAGCGGGGTGGGGAACCACAGTCATGATCCTGACATTTCAGATCTTCTAATGAGGGCTTAGTTGTTTATTTTGGTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47711546 172 + 51301725 AGGAACAGCAGGTCCTCTGAGGACATAGGTGTGACTCACACACTTGAGTGTTTCCATGAc-ggtcagggctgcagtgtggCTGCTGTCATTCTACCAGAAGAGGTG-GGGAAACCACAGCCATGGCCCTGACATTCCAAATCCGCTGATGGGGGCTCAgctgtttatttttgtt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47374601 172 + 50890351 AAGAACAGCAGG-CCTCTGAGGACAAGAGCGTAACTCACACCCTCCAGCGTTTCCATGAT-GGTCGGGGCTGCAGTGTTGCCGCTGTCATTCTACCAGAAGCGGGGTGGGGAACCACAGTCATGACCCTGACATTTCAGATCTTCTAATGAGGGCTCAGTTGTTTATTATGGTT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=-2102.000000 s hg38.chr19_GL949747v2_alt 435865 7 + 729520 -CATCAAT s ponAbe2.chr19 56576544 7 + 60714840 -GTTTATT i ponAbe2.chr19 C 0 I 18 s macFas5.chr19 55622684 7 + 59248254 CATGCAT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47711718 7 + 51301725 caggCAT- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47374773 7 + 50890351 CGTGCAT- i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I e panTro4.chr19 59676488 30 + 63644993 I a score=4957.000000 s hg38.chr19_GL949747v2_alt 435872 11 + 729520 TGGCTGATATT s macFas5.chr19 55622691 11 + 59248254 TAGCTGATATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47711725 11 + 51301725 CGGCTGGTATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47374780 11 + 50890351 TAGCTGATATT i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56576551 18 + 60714840 I e calJac3.chr22 45773030 20261 + 49145316 I e panTro4.chr19 59676488 30 + 63644993 I a score=9514.000000 s hg38.chr19_GL949747v2_alt 435883 11 + 729520 CCATTCACATA s panTro4.chr19 59676518 11 + 63644993 CCATTCACAAA i panTro4.chr19 I 30 C 0 s macFas5.chr19 55622702 11 + 59248254 CCATTCACAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47711736 11 + 51301725 CCATTCACAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47374791 11 + 50890351 CCATTCACAAA i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56576551 18 + 60714840 I e calJac3.chr22 45773030 20261 + 49145316 I a score=283415.000000 s hg38.chr19_GL949747v2_alt 435894 253 + 729520 GGACTTGCCCTCCATGCCGTGTCTACTTTGTATTGTTTTATATGAGTAATTTTGCAGTATTAAAATCTAGTAAGAGTTGCTTCTCCAGCACTTGCTCAAAGTTCTCAGCTGACACTT--GTTGTAGGGAGACGCCATGTCTATGCAGGATGGGTCCTTCCTGTAGCCCTGGGCACCCAGGTGTGGTAGGAGCCTTAGAAA-GTGGAAA-TGGGGAGAATCTTCTGGGCACTGGGAGTGAGGGGCGGCTCCACATCCT s panTro4.chr19 59676529 257 + 63644993 GGACATGCCCTCCACCCCATGTCTACCTTGTGTTCTTTTATGTGAGTAATCTTACAGTATTAAAATCTAGTAGGAGTCTCTTACTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTGTTGTAGGGAGACACCATGTCTTTGTGGGATGCGTCCTTCCTTTAGCCCTGGGCACCAAGGTGTGATAGCAGCCACAGAAACGTGGAAAGCGAGGAGAATCTTCAGAGCACAGGGAGGGAGGGGCGGCTCCACATCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56576569 254 + 60714840 GATCATACCCTCCATCCTGTGTCTACCTTGTGTTCTTTTATGTCAGTAATTTTGCAGTATTAAAATCTAGTAAGAGTCGCTTCTTCAGCACTTGCTCAAAGTTCTCAGCTGACACTT--GTTGTAGGGAGACACCATGTCTATGTGGGATGGGTCCTTCCCATAGCCCTGGGCACCCAGGTGTGGTAGGAGCCTTAGAAACGTGGAAA-TGGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCGGCTCCACGTCCT i ponAbe2.chr19 I 18 C 0 s macFas5.chr19 55622713 257 + 59248254 GGTCATGCCCTCCATCCTGTGTCTACTTTGTGTTTTTTTATGTGAGTAATCTTGCAGTATTAAAATCTAGTAAGAGTCACTTATTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTCTTGTAGGGAGATGCCATGTCTATGCGAGATGGGTTCTTCCTGTAGCCCTGGGCACCCAGGTGTGGTAGGAGCCTTAGAAATGTGGAAAGTGGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCTGCTCCACATCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47711747 247 + 51301725 GGACATGCCCTCCACCCCATGTCTACCTTGTGTTGTTTTATGTGAGTCATCTTGCAGTATTAAAATCTAG---GAGTCGCTTACACAGCACTTGCTCAAAGTTCTCAGCTAACACTTTG-TCGCAGGGAGACACCATGTCTTTGCGGAATGGGTCCTTCCTTTAGCCCTGGGCACCCAGGTGAGGTAGGAGCCATAGAAACATGGAAAGCGAGGAGAATCTTCTGAGCACACGGAGGGTGGGGCGGCTCCG------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47374802 257 + 50890351 GGTCATGCCCTCCATCCTGTGTCTACTTTGTGTTGTTTTATGTGAGTAATCTTGCAGTATTAAAATCTAGTAAGAGTGGCTTATTTAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTCTTATAGGGAGACGCCATGTCTATGTGGGATGGGTTCTTCCTGTAGCCCTGGGCACCCAGGTGTGGTAGGAGCCTTAGAAATGTGGAAAGTGGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCTGCTCCACATCCT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=13214.000000 s hg38.chr19_GL949747v2_alt 436147 13 + 729520 CCTCTCT-AAGGCA s panTro4.chr19 59676786 13 + 63644993 CCTCTCT-AAGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56576823 13 + 60714840 TCTCTCT-AAGGTA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55622970 14 + 59248254 CCTCTCTAAAGGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47711994 13 + 51301725 CCTCTCT-AAGGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47375059 14 + 50890351 CCTCTCTAAAGGCG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19892845 13 - 122678785 CCCATTT-AACACA i canFam3.chr1 N 0 C 0 e calJac3.chr22 45773030 20261 + 49145316 I a score=431628.000000 s hg38.chr19_GL949747v2_alt 436160 310 + 729520 GTGCCTCCTTCTCCCCCAGGTGGTCAGGACAAGCCCTTCCTGTCTGCCTGGCCCAGCGCTGTGGTGCCTCGCGGAGGACACGTGACTCTTCGGTGTCACTATCGTCATAGGTTTAACAATTTCATGCTATACAAAGAAGA----------------------CAGAATCCACGTT--CCCATCTTC-----------------CATGGCAGAATATTCCAGGAGGGCTTCAACATGAGCCCTGTGACCACAGCACATGCAG--GGAACTACACATGTCGGGGTTCACACCCACACTCCCCCACTGGGTGGTCGGCACCCAGCAACCCCATGGTGATCATGGTCACAGGTCAGA s panTro4.chr19 59676799 307 + 63644993 GTGCCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCTGCCTGGCCCAGCCCTGTGGTGCCCCC---AGGACATGTGATTCTTCGGTGTCACTCTTATCTTGGGTTTAACAACTTCAGTGTGTACAAGGAAGA----------------------TGGGGTGCCTGTC--CCTGAGCTT-----------------TACAACAGAATATTCTGGAAGAGCCTTTTCATGGGCCCTGTGACCCAAGCACAGGCAG--GGACCTACAGATGCCGGGGTTCACACCCACACTCCCCCAGTGGGTGGTCGGCACCCAGCAACCCCCTGGTGATCGTGGTCACAGGTCAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56576836 310 + 60714840 GTGCCTCCTTCTCCCCCAGATGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCACTGTGGTGTCTGAAGGAGAACATGTGTCTCTTCAGTGTCGCTCTCGTCTTGGGTTTAACAAATTCAGTCTGTCCAAAGAAGA----------------------CGGGATGCCTGTC--CCTGAGCTC-----------------TACAACGGAGTATTCCAGAACAGCTTCCTTATGGGCCCTGTGACCCCAGCACATGCAG--GGACCTACAGATGTTGGGGTTCACACCCACACTCCCCCACTGGGTGGTCGGCACCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAGA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55622984 310 + 59248254 GTGCCTCCTTCTCCCCCAGATGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCGCTGTGGTGCCTCAAGGAGAACACGTGAGTCTTCAGTGTCACTCTCATCTTGGGTTTACCATCTTCAGTCTGTACAAGGAAGA----------------------TGGGGTGCCTGCC--CCTGAGCTC-----------------TACAACAGAAGATTCTGGAAGGACATCCTCCTGGGCCCTGTGACCCCGGCACACGCAG--GGACCTACAGATGTCGGGGTTCACACCTGCACTCCCCCACTGAGTGGTCGGCTCCCAGCAACCCCCTGGTGATCACGGTCACAGGTCAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47712007 304 + 51301725 GCGCCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCGGCCTGGCCCAGCCCTGTGATGTCTCCAGG-----ATGTGACTCTTTGGTGTCACTCTTATCTTGGGTTTAACAGATTCAGTCCGTACAAGGAAGA----------------------CGGGGTGCCTGTC--CCTGAGCCC-----------------TACAACAGAATATTCTGGAACAGCTTCCTCATGGGCACTTTGATCCC-ACACATGCAG--GGACCTACAGATGTGGGGGTTCACACCCGCACTCCCCCAATGGGTGGTTGGCTCCCAGCAACCCCCTGGTGATCACGGTCACAGGTCAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47375073 310 + 50890351 GTGACTCCTTCTCCCCCAGATGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGTGCTGTGGTGCCTCAAGGAGAACACGTGAGTCTTCAGTGTCACTCTCATCTTGGGTTTACCATCTTCAGTCTGTACAAGGAAGA----------------------TGGGGTGCCTGCC--CCTGAGCTC-----------------TACAACAGAAGATTCTGGAAGGACATCCTCCTGGGCCCTGTGACCCCAGCACACGCAG--GGACCTACAGATGTCAGGGTTCACACCTGAACTCCCCCACTGAGTGGTCGGCTCCCAGCAACCCCCTGGTGATCACGGTCACAGGTCAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45793291 328 + 49145316 GTGCCTCCTTCTCTTCTAGGATATTACAGCAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGACCCCAGGAGGAAGCGTGACCCTCCAGTGTGGCTCACAGGTGGCATTTCATGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACCGTGCCGGAGCTCCCAGC--CCCGTACCC---------------------GTGGGTCGTCCTGGGCCGTCTTCTCCGTGGGCCCCGTGAGCCC--CAGTCGCAGGTGGATGTACAGGTGCTATGGTTATGACTCTCACTCTCCCTATGTGTGGTCTTCACCCAGTGATCTCCTGGAGCTCCGGGTCCCAGGTGAGA i calJac3.chr22 I 20261 T 22013 s canFam3.chr1 19892858 327 - 122678785 GCCCCTCC-CCTCTCCTAGGGATGCACAGCAAACCCAGCCTCTCAGTTCTGCCCAGCCCTATCGTGCCCTCAGGAGGGAACGTGACCCTCCAGTGTGGTTCATGGAGAGGATTTAACAGGTTTATTCTG-ATGAGGGAAG----------------------TAGAAGGCCAGCCCTCCTGGACCCGGGACTCCCAGCGAGCCCCCAGTGGAGAGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGATCCCCAGCCTCATGT--GGACGTTCAGATGCCATGGTTTTTACAGCAACACCCCCCAGGTGTGGTCACTCCCCAGTGACCCTCTGGAGCTGCTGGTCTCAGGTGAGA i canFam3.chr1 C 0 I 239 a score=692277.000000 s hg38.chr19_GL949747v2_alt 436470 657 + 729520 GGCTTTCCGTCTGGGCTTCTCACTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGGCTGTCCGTCAGGGTCCCATCACCCAGGCCCTGGCTGTATTTGGGGTCAAGGGAGATTGAATACAGGGCAAATGGGTGCtgtggtgggaagaataactgtccccaatgatggctacattgtaatccctggagcctgtgactatttatgttatagggcaggggactgaaggggaaggtggagctcaggttgttgatgagttgaccttgagatggggagacagcctggactgtcccactgggctcagtgtaatcacaagggtccgcgtgagaggtggaggaagaggggagtggggattagagcagtgtagtgggagggaga--cgctatcagccactgcgggctttgaaagtggaggaagaccactagtcacagaatgcaggtggcctctaagggctggagaagtcaggagaactgattc---gctgattctccagagggaacgcagccctgtagacgccttgatttcagcacagggagaactggatccaatttctg-tctccagaagtggaaggggtcagtgtgttctctcctgctgccatgtttgtggtaattttctgcagcagcaacaggaaaccaacacaGGAACCCAGGTCAAGGACAAGTT s panTro4.chr19 59677106 627 + 63644993 GGGCTCCTGTCTGGGATTCTCCTGGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGCGTGTCCTTGA--------------AGGCCCTGAGTGTATTTGGGGTAAAGGGGGATTGAATACAGGG-AAATGGGTGCtgtgctgggaagaataattgtccccagtgatgactgcattctaatccctggagtctgtgactatttatgttacaggggaagggactgaaggggaagatggagctcaggttgttgatgagttgaccttgagatggggagatggcctggactgtcccagtgggctcagtgtagtcacaagggtccacatgaaaggaggaggaagatgagagtggggattagagcagcataatgggagt------ctccatcagc----------tttgaaggtggaggaaggccatgagccat-gaatgcaggtggcctatagaggctggaaaagtcaag-gaactgattct--cctgagtctccagagggaacgaagccctacagatgccttgattttagcccacgaaaaacagggtcccatttctg-tctccagaattggaaggggtcagtgtgctctctcctgctgtcatgcttctgataattttctacagcaacaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56577146 659 + 60714840 GGCTTTCTGTCTGGGCTTCTCACTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGGGTGTCCATCAGGGTCCGATCATCCAGGCCCTGACTgtatttggggtaaagggggattcagtacagag-aaataggtgctgtggtgggaagaataattgtccccagtgatggctacatggtaatccatggaccctgtgactatttatgttatagggcaggggactgaaggggaaggtggagctcagtttgttgatgagttgaccttgagatggggagacagcctggactgtcctgctgtgctcagtgtaatcacaagggtcctcatgacaggaggaggaagaggagagtggggattagagcagcgtagtgggagggaga--ctccatcagccacagtgggctttgaagatgggggaaggccatgagccac-aaaggcaggtggcctctaagggctggagaagtcaagggaactgattcttccctgagtctccagaggaaacacagccctgaagacgccttgattttagcccagagagaactgggtccgatttctgttctccagaagtggaaggggtcgttgtattctctcctgccgccatgtttgtgataattttctccagcagcaacaggaaaccaacacaggaacccaggtgaaggacaagtt i ponAbe2.chr19 C 0 N 0 s macFas5.chr19 55623294 649 + 59248254 GGGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGCTGGGGGTGTCCACCAGGGTCCCATCACCCAGGACCTGACTGTCTTTAGGGTAAAGggggattcagtacagaa-aaatagatactgtggtgggaagaataattgtccccagttatggctacatggtaatcagtggaccctgtgactctttatgttatagggcaggggactgaaggggaagatggagctcaggttgttgatgagttgaccttgagatggggagacgtcctggactgtcccactgggctcagtgtaatcacaagggaccacatgagaggaggaggatgaggagagtggggattagaacagcatagtgggagggagactcactacaggc----------tttgaaggtgaaggaaggccacgaaccat-gaaggcaggtgg-ctctaagggctggagaagtcaagggaactgattctc-cctcagtctccagtggaagcacagccctgcagatgccttgattttagcccagagagaactgggtcagatttctgttctccattagtagaaggggttattgtattctctcctgccaccatgtttgtgataattttctacagcagcaacaggaaaccaacacaggaactcaggtcaaggacaagtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47712311 640 + 51301725 GGGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGCTGGGGGTGTCCGTCAGGATTTGGTCACCCAGGCCCTGACTTTATTTGGGGTAAAGGGGGATTGAATACATGG-AAATGGGTGCTGTGGTGGGAAGAATAACTGTCCCCAA-TATGGCTACATTCTAATCCCTGGAGCCTATGACTCTTTATGCTATAGGGCAGGGGACTGAAGGGGAAGACGGAGCTCTGGTTGTTGATGAGTTaaccttgagatggggagacGGCCTGGACTGTCCCGCTGGGCTCAGTGGAATCACAAGGGACCACACGAGAGGAGAAGGATGAGGGGAGTGGGGATTAGAGCAGCGTCGTGGGAGA------CTCCATCCGC----------TTTGAAGGTGCAGGAAGCCCATGGGCCAC-CAATGCAGGTGACCTATAGAGTCTGGAAAAGTCAA-GGAACTGATTCTC-CC-AAGTCTCCGGAGGGAACGCAGCCCTGCAgatgccttgattttagcccaggaAAAACAGGGTCCAATTTCTG-TCTCCAGAAGTGGAAGGGGTCAGTGtgttctctcctgctgccttgctTCTGATAATTTTCTACAGTGGCAACAGGAAACCAACACTGGAATCCAGGTCATGGATAAGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47375383 650 + 50890351 GGGCTCCTGTCTGGGCTTCTCCTTGTCCCATCTCCTGAATCCCAGAGCTTCTGCTGGGGgtatccaccagggtcccatcacccaggacctgactgtatttggggtaaagggggattcagtacagag-aaataggtactgtgatgggaagaataattgtccctagttatggctacatggtaatccgtggaccctatgactatttatgttatagggcagaggactaaaggggaagatggagctcaggttgttgataagttgaccttgagatggggagacggcctggactgtcccgctgggctcagtggaatcacaagggaccacatgagaggaggaggatgaggagagtggggattagagcagcacagtgggagggagactcactacaggc----------tttgaaggtgaaggaaggccacgagccat-gaaggcaggtggcctctaagggctagagaattcaagggaactgattctc-cctgagtctccagtggaagcacagccctgcagattccttgattttagcccagagagaactgggtcagatttctgttctcctttagtggaaggggttattgtattctctcctgccaccgtgtttgtgataattttctacagcagcaacaggaaaccaacacaggaactcaagtcaaggacaagtt i chlSab2.chr6 C 0 I 74353 e canFam3.chr1 19893185 239 - 122678785 I e calJac3.chr22 45793619 22013 + 49145316 T a score=-246.000000 s hg38.chr19_GL949747v2_alt 437127 8 + 729520 AGGAACCC s panTro4.chr19 59677733 5 + 63644993 AAGAA--- i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47712951 7 + 51301725 AAGAAAC- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19893185 239 - 122678785 I e calJac3.chr22 45793619 22013 + 49145316 T e chlSab2.chr6 47376033 74353 + 50890351 I e macFas5.chr19 55623943 0 + 59248254 C a score=98566.000000 s hg38.chr19_GL949747v2_alt 437135 204 + 729520 AGGTCAAGGACAAGTTAGGAAACCAAACAAGGACagccaggtgtggtggtgggcgcgagtaatc-c-aacgactggggaggctgag-gcaagagaatcacttgaactggggaggcagaggtttcagtgagccaagacaacaccactacactccagcctgggtgaaaaagtga----ctgtctcaaaaataaaTTAATTAATCAATTAATTA s panTro4.chr19 59677738 181 + 63644993 ------ATGACA---------------CAAGGAtagccgggcgtggtggcaggtgcatgtaatc-ctagcgactcggcaggctgagagcaggacaatcacttgaacccaggagacagacgttgcagtgagcctagaccacaccacttcactccagcctgggtgaaggagtgagactctgtctccaaaaT--------TAATTAATTAATTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56687870 188 + 60714840 ----------------AGGAAACCAAACAAGGAtagccgggcgtggtggtgggcgcgagtaatc-c-aacgactggggaggctgag-gcaagagaatcacttgaaccggggaggcagaggtttcagtgagccaagaccacaccactacactccagcctgggtgaaaaagtga----ctgtctcaaaCATAAATTAATTAATCAATTAATTG i ponAbe2.chr19 N 0 N 0 s papAnu2.chr19 47712958 178 + 51301725 --------------------GGCC---CAAggatagccgggcgtggtcgcaGGCGCATGTAATCtt-agcgactcgggaggctgag-gcaggagaatcgcttaaacccaggaagcagaggttacagtaagctgagaccacaccacttcactccagcctgggcgaaggagtgagactctctctccaaaattaattaattaatta-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47450386 192 + 50890351 AGGTCAAGGACAAGTtaagaaacc---aaacgatagccgggcatggtggtgggcgtgagtaaac-c-aacgact--ggattc------------aatcgcttgaatccgggaggcagaagttgcagtgagccaagaccacaccactatactcctgcctgggtgaaaaagtgacactctgtctcaaaaatcaattaattaatcaattaatta i chlSab2.chr6 I 74353 T 74545 e canFam3.chr1 19893185 239 - 122678785 I e calJac3.chr22 45793619 22013 + 49145316 T e macFas5.chr19 55623943 0 + 59248254 C a score=213245.000000 s hg38.chr19_GL949747v2_alt 437339 191 + 729520 AagaaaccaaacaaggagaaggttggctaccctgagatcagcaagggcaggatgctgatgttaccaccaggctccatccacataggaaggggttgatgctcctggaaccagcaccaggggccaccctatggaagctggggccatggagaaggcacagacatggcaggagaggctcccaaTCCCCATCAGGA s panTro4.chr19 59677919 191 + 63644993 AAGAAACCAAACAAAGAGAAGGTTGGCTACACCAAGATCATCAAGTGTGGGATGATGATGCCACAACCATGTTCCATCCACATAGGGAAGTGTTGATACTCCTCAAACCAGCACCAGGAGCCAGCCTATGGAAGCTGGCACCATGGAGAAGGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCCACCAGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56577805 190 + 60714840 aagaaaccaaacaaggagaa-gttggctacactgattttagcacgggtgggatactgatgctaccaccaggctcgatccacatagggaggagttgatgctcctggaaccagcaccaggggccaccttatggaagctggggccaTGGAGAATGCACAGACATGACAGGAGAGGCTCCCAATCCCCATCAGGA i ponAbe2.chr19 N 0 C 0 s macFas5.chr19 55623943 191 + 59248254 aagaaaccaaacaaggagaaggttggctacactgatttcagcacaggcggaatactgatgctaccaccaggctcgatccacagaggaaggggttgattctcctggaaccagcactaggggccaccctatggcagctgggaccacggaaaaggcacagacatggcaggagAGGCTCCCAACCCCCATCAGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47713136 191 + 51301725 aagaagcCAAACAAGGAAAAGGTTGGCAACCCCGAGATCAGCAAGGGCGGGACGCTGATGCCACCGCCAGGTTCGATCCACAAAGAGAGGGGCTGATAGTCCTCGAACCAGCACCAGGAACCACCCTATGGAAGCTGGCACCATGGAGAAGGCACAGGCATGGCAGGAGAGGCTCCCAATCCCCACCAGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47376033 191 + 50890351 aagaaaccaaacaaggagaaggttggctacactgatttcagcacaggcggaatactgatgctaccaccaggctcgatccacacagggaggggttgattctcctggaaccagcaccaggggccaccctatggcagctgggaccatggaaaaggcacagacatggcaggagAGGATCCCAACCCCCATCAGGA i chlSab2.chr6 T 74545 I 58581 e canFam3.chr1 19893185 239 - 122678785 I e calJac3.chr22 45793619 22013 + 49145316 T a score=440534.000000 s hg38.chr19_GL949747v2_alt 437530 429 + 729520 ACAGGGTGTGTGGTCACTGATGTCTGTCTTACTGATGAGTTGATACCACCTGCCAGAGACTCCAATTTGTTCAAAAGAGATTGATTCAGGCTGCTAAGAGCCTGGACATGCAGCCTGTCCT-------CTTCCACCCCCATATAAACAGCAGGAAAGAGATTAGTGGGAAACAGATACAACAGCCCAAGAGATGAGGCTGTCTTCACAGTGGCAAGGGAGTCAGGGGCTACTGGAGACAGAGGGACAGAGAAGAGGGAGGAAGACAGATGGAGGCACCTGCACCAGGGGATATGGGCACAGAAAAGA-CACGGAGATGCAGAGAGGGAGGAGAGAGACAGACACGGG-GAGGGGAACCCTCACTCATTCCAGGTGCCATGGATGGGATGATAAAGAGAGATGCCTTCTAAACTCACAACTTCTCTTTCTAGGAAACCA s panTro4.chr19 59678110 436 + 63644993 ACAGGGTGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATAGCTCCTGCCAAGGATTCCAATTCGTCCAAAACAGATTGAACCAGGCTGCTAAGAGCCTGGATGTGCAGCCTATCCTGGTTCCTCTTCCACCCCCACATCGACAGCAGGAAAGACATTAGTGTGAAATAGATACAACAGCCCAAGAGATGAGGCTGAG--CCCAATGGGAAGGGAATCAGAGGCTACTAGAGACAGAGAGACAGAGAAGAGGGAGGGAGACAGATGGAAGGACCTGCACCAGGAGTTATGGGCACAGAAAAGAACTTCAAGACACAGAGAGGAAGGAGAGAGACAGACACCAGCGAGGGGAAGTCTCACTCATTCTAGGTGCCATGGATGGGATGATAAAGAGAGATGCCTTCTAAACTCACAACCTCTCTTCCTAGGAGTCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56577995 428 + 60714840 ACGG-------GGACACTGATGCCTGCCTTACTGATGAGTTCATACCTCCTGCCGGCCTTTCCAATCTGTCCAAAAGAGATTGATTCAGGCTGCTAAGAGCCTGAACATGCAGCCTGTCGTGGTTCCTCTTCCACCCCCACATAAACACCAGGAAAGAGATTAGTGGGAAAGAGATACAACAGCCTAAGAGATGACGCTAAG--CACAGTGGGAAGGGAATCAG-GGCTACTAGAGACAGAGAGACAGGGAAGAGGGAGGGAGACAGATGCAGGGACCTGCACCAGGGGTTATGGGCACAGAAAAGAACACGGAGACACAGAGAGGTAGGAGAGAGATAGACACCATGGAGCGGAAGCCTCACTTATTTCAGGTCCCATGAATGGGATGAGAAAGGGAGACACCTTCTGAACTCACAACCTCTCTTCTTAGGAGTCCA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55624134 427 + 59248254 ACAG-------GGACATTGGTACCTGCCTTACTGATGAGTTCACACCTCCTGCCAGCCATTCCCATTTGTCCAAAAGAGATTGATTCAGGCTGCTGAGAGCCTGGACATGCAGCCTGTCGTGGTTCCTCTTCCAGCCCCACATAAACACCAGCAAAGAGATTAGTGGGAAACAGATACAACAGCCTAAGAGATGACACTGAG--CCCAGTGGGAAGGGAATCAGGGG-TCCTAGAGACAGAGAGACAGGGAAGAGGGAGGGAGACAGATGGAGGGACCTGCACCAGG-GTTATGGGCACAGAAAAGAACATGGAGACACAGACAGGGAGGAGAGAGATAGACACCATGGAGGGGAAGTCTCACTTATTCCAGGTCCCATGAATGGGATGAGAAAGGGAGACGCCATCTGAACTCACAACCTCTCTTCTTAGGAGTCTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47713327 435 + 51301725 ACAGGGAGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATATGT-CTGCCAAGGACTCCAATGTGTCTGAAAGAGATTGAACCAGCCTGCTAAGAGCCTGGACATGCAGCCTGTCCTGGTTCCTCTTCCACCCCCATGTAGACAGCCGGAAAGAGATGAGTGCGAAATAGATACAGCAGCCCAAGAGATGAGGCTGAG--CCCAGTGGGAAGGGAATCAGGGGCTactagagacagagagacagagaagagggtgggagacagaaggaaggaCCTGAAACAGGAGTTAAGGGCACAGAAAAGAAcatggagacacagagaggaaggagagagaaagacaccAGGGAAGGAAAGCCTCACTCATTCCGGATCCTGTGGATGAGATGAAAAAGAGAGATGCCTTCTAAACTCACAACCTCTCTTCCTAGGAGTCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47434805 425 + 50890351 ACAGGGAGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAGGGACTCCAGTTTGTCCAAAAGAGATTGAACCAGGCTGCTGAGAGCCTGGACATGCAGCCTGCCATGGTTCCTCTTCCACCCCCACATAGACAGCAGGAAACAGATTAGTAGGAAACAGATACAACAGCCTAAGGGATGAGGCTGAG--CCCAGTACGAAGGGCGTCCGGAGCTACTAGAGACAGACGGACAGAGAAGAGGGAGGGACACCAATGGAGGGACCTGCACCAGGGGAT-----------AAAagacagggagacacagagagggaggagagagacagacagCCAGGAGGGGAACCCTCACTCATTCCAGGTGCTGTGGATATGATGACAAAGGGAGACGTCTTCTAACCTCACAACCTCTCTTTCTAGGAGTCCA i chlSab2.chr6 I 58581 C 0 e canFam3.chr1 19893185 239 - 122678785 I e calJac3.chr22 45793619 22013 + 49145316 T a score=4011.000000 s hg38.chr19_GL949747v2_alt 437959 2 + 729520 CA s panTro4.chr19 59678546 2 + 63644993 CA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56578423 2 + 60714840 CA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55624561 2 + 59248254 CA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47713762 2 + 51301725 CA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47435230 2 + 50890351 CA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3387547 2 - 49145316 CA i calJac3.chr22 n 22013 C 0 e canFam3.chr1 19893185 239 - 122678785 I a score=416324.000000 s hg38.chr19_GL949747v2_alt 437961 307 + 729520 GAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGGAGAGAGAGTCATCCTGCAATGTTGGTCAGATATCATGTTTGAGCACTTCTTTCTGCACAGAGAGTGGATCTCTAAGGACCCCTCACGCCTCGTTGGACAGATCCATGATGGGGTCTCCAAGGCCAA------TTTCTCCATCGGTTCCATGATGCGTGCCCTTGCAGGGACC--TACAGATGCTACGGTTCTGTTACTCACACCCCCTATCAGTTGTCAGCTCCCAGTGATCCCCTGGACATCGTGGTCACAGGTGAGAGTGTCTAGAC s panTro4.chr19 59678548 307 + 63644993 CAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGAAGAGACAATCATCCTGCAATGTCGGTCAGATGTCATGTTTGAGCACTTCCTTCTGCACAGAGAGGGGGAGTGTAACGACACTTTGCACGCCATTGGAGAGCTCCACGATGGGGTCTCCGAGGCCAA------CTTCTCCATCGGTCCCATGACGGAAGACCTGGCAGGGACC--TACAGATTCTACAGTTCTGTTCCTCACTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCACAGGTGAGAGTGTCCGGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56578425 307 + 60714840 GAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGGAGAGACGGTCATCCTGCAATGTTGGTCAGATATCAGGTTTGAGCACTTCCTTCTGCACAGAGAGGGGACCACTGAGGACCCCTTGCGCCTCGTTGGAGAGCTCCACGATGCAGGTTCCCAGGTCAA------CTATTCCATGGGTCCCATGACACCTGCCCTTGCAGGGACC--TACAGATGCTTTGGTTCTGTCACTCACTTACCCTATGAGTTGTCGGCTCCCAGTGACCCTCTGGACATCGTGATCATAGGTGAGAGAATCCAGAC i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55624563 307 + 59248254 GAAAGCCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGGAGAGATGGTCGTCCTGCAATGTTGGTCAGATATGAGGTTTGAGCATTTCCTTCTGCACAGAGAGGGGATCACTGAGGACCCCTTGCACCTCACTGGACAGCTCCATGATGGGGGTTCCCAGGCCAA------CTCTTCCGTGGGGCCCATGATACCTGCCCTTGCAGGGACC--TACAGATGTTTTGGTTCTGTCGCTTACTCCCCCTATGAGTGGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCATAGGTGAGAGAATCCAGAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47713764 307 + 51301725 GAAAACCTTCCCTCCTGGCCCTCCCAGGTCCGCTGGTGAAATCAGGAGAGACAGTCATCCTGCAGTGCTGGTCAGATATCAAGTTTGAGCACTTCCTTCTGCACCGAGTGGGGAAGCTTGAGGAGCCCTTGCGTCTCATCGGAGAGCTCCATGACGGGGGTTCCAAGGCCAA------TGTCTCCATCAGTCCAGTGACACCTGCCCTGGCAGGGACC--TACCAATGCTACGGTTCTTTTACTCACTCCCCCTATGAATGGTCAGCTCCCAGTGACCCCTTGGACATCGTGATCACAGGTGAGAGTGTCAGGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47435232 307 + 50890351 GAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGGAGAGACGGTCATCCTACAATGTTCCTCAGATATCGTGTTTGGGCACTTCTTTCTGCACAGTGAGGTGACCTTTGAGGAGCCCTTGCACCTTGTTGCAGAGCTCCATGGTAGGGGTTCCCAGGTCAA------CTACTCCATCAATTCCACGACGTCTGACCTTGAAGAGACC--TTCAGATGCTACGGTTCTCTCACTCACTCCCCCTATGTGTTTTCAGCTCCCAGTGACCCCCTGAACATCGTGATCACAGGTGAGAGTGTCCGGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3387549 313 - 49145316 CAAAACCCTCCATCTCAGCACACCCAAGCTCCCTGGTGGCCGCGGGAGTTAGGGTGACCGTGTGCTGTCACTCGGAGCTGGCATTTGATGAGTTTATCTTATACAAAGATGGGCACACACAGCATTCCCAGGAACTTGACACGAGGTTGGAGGCTGGGACTTACTACGTCAAGGCTGTCTTTCGCCTGGGTCCTGTCACGCCGGCCCAGGCAGGAGCC--TACAGATGCTGTGGTTCTTTCAGTCACTCCCGCTATGAGTGCTCGGCTCCCAGCGACCCCCTGGAGATTGTGATCACAGGTGAGTGTGGCTGGAC i calJac3.chr22 C 0 I 632 s canFam3.chr1 19893424 298 - 122678785 GGAAGCCCTCCCTCTTGACCCAGCAGGGCCCTGTTGTGACCTCTGGACAGAACCTGACCCTCCAGTGTCTCTCTGATGTCAGCTACGACAGATTCGCTCTGTTCAAGGAAGGGACAAGTGACCTCCTTCAGCTTCATGGCCGGCAGACTCAGGCTGGGTTCTCTGGGGCAGA------CTTCTCCCTGAGCCCAGTGAAATCCTCCC--GCGGGGGCCAGTACACATGCTACGGTGGACACAACCTCTCCTCCCA---GTGGTCAGCCCCCAGTGACCCCCTAGACATCCTGGTCACAGGTGAG-GAGCC----- i canFam3.chr1 I 239 C 0 a score=9790.000000 s hg38.chr19_GL949747v2_alt 438268 20 + 729520 ATTGTTCTCATTGTCACTGG--- s panTro4.chr19 59678855 20 + 63644993 ATTCTTCTCATTGTCATTGG--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56578732 20 + 60714840 CTGCCTCTCACCCTTGCTGG--- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55624870 20 + 59248254 CTGCCTCTCACCCTTGCAGG--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47714071 20 + 51301725 ATTCTTCTCAATGTCACTGG--- i papAnu2.chr19 C 0 T 17858 s chlSab2.chr6 47435539 20 + 50890351 ATTCTTCTCATTGTCACTGG--- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19893722 14 - 122678785 ---------ATGGGTACAGTCAG i canFam3.chr1 C 0 C 0 e calJac3.chr22 3387862 632 - 49145316 I a score=178107.000000 s hg38.chr19_GL949747v2_alt 438288 161 + 729520 GACACAGAGTGAAT-GATCCAGGACTTGGAACCCCCAGGTGGT---CATGAGGAAGATAAGTGTGGGATTCTTATGGAAAGAGAGTGACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACATAAGT---ACAGAACAGGTGTCATAAC--AGGGGACAGA-- s panTro4.chr19 59678875 161 + 63644993 GATGGAGAGTGAAT-GATCCACGACTTGGAACCCCCAGGTAGT---TCTAAGGAAGATGAGCTTGGTATTCTTATGGAGAGAGACTGACTTGGTGAAGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGT---ACAGACCAGGTGTCATAAC--AGAGGACAGA-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56578752 162 + 60714840 GACAGGGAGTGAAT-GATCTAGGA-TTGGAAGCCCCAGGTGGT---CATGAGGAAGATGAGTGTGGGGTTCCTATGGAGAGAAAGTGACTTGGTGAGGTCTGTACCAACAAAGGCAGAGAAACTGGAGACACAAGT---ACAGACCACATGTCATAACATAGAAGCCAGA-- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55624890 162 + 59248254 GACAGGGAGTGAAT-GATCTAGCAC-CGGAAGCCCCAGGTGGT---CATGAGGAAGATGAGTGTGGGATTCTCATGGAGAGAAAGTGACTTCATGAGGTCTGTACCAACAGAGGTAGAGAAACAGGAGACACAAGT---ACAGACCACACATCATAACGTAGAAGCCAGA-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47696233 162 + 51301725 GACAGGGAGTGAAT-GATCTGGGAC-TGGAAGCCCCAGGTGGT---CATGAGGAAGATGAGTGTGGGATTCTCATGGAGAGAAAGTGACTTCATGAGGTCTGTACCAACAGAGGTAGAGAAACAGGAGACACAAGT---ACAGACCACACGTCATAACGTAGAAGCCAGA-- i papAnu2.chr19 T 17858 C 0 s chlSab2.chr6 47435559 161 + 50890351 GACACAGAGTGAAT-GATCCAGGACTTGGAAGCCCCGGGTGGT---CATGAGGAAGATGAGTGTGGGATTCTTATGGAAAGACACTCACTTGGGGAGATCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGT---ACAGACCTGGTGTCATAAC--AGAGGACAGA-- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19893736 131 - 122678785 GACCCAGACTGCACAGGTCCCTGA--GGGGAACCCCAGGTAGTGGCCGCCAGGACCAAGGGTGTGGGGTCCACAGGGAGGGAG--------------------------AGAGACAGAGAAACCGGGGATAAAGATGGGAGAGACT-----------C--AGAGGACACAGA i canFam3.chr1 C 0 C 0 e calJac3.chr22 3387862 632 - 49145316 I a score=819804.000000 s hg38.chr19_GL949747v2_alt 438449 799 + 729520 CACAGGGGCCATACAGGGAGGTA-G-AAAAGAGAGAAAGAGGTAAAGGAGACACTCAGACAGACAGACATGTCCCAGAGAGAGGTGTCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTT-TCTACCAGAAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGCCACCTACAGATGCCGTGTTTATTCTGACACCTCTGCCTTCCATGCAATGGAGA-GTAATCATCCCAGGATATCATGGCCC------------CAGAACACCAACCCCTGTATGCTGTGTGAACTTGGGGTCCCCAGACTGGATTCTGAGGCTCATATTCCAAATAATCCCACATATGATAGGATCGCT-----------------GAGAGACACAGAGAAAAATCAGGGACACCAAAAAGCAAAGACATAA--ACACACACAAAATGAGCCAGAAGAAGGAGATTAAGAGATTCACAGACACATAAAAAGAAAGAA-AAGAGGGCAGAG---TGGAGAGAATGATGGAAAGGAGGAGAGAAAAGCCCCAAAATCAGAACCCTGAGGGAGGGACACAAAGACAGAGAAAGATAAAGATGTGGGGATGGATTGCAGAGATTCC-AAATAGAACTAGAGAGACTGAGAGGCAGAGAAAGACA-AGGA--GACGGagagagagagatgatagatggatagatagacgtagatagatgataaat---aggtagatgatagataatgg----attggttatagatacatagatgatgactg------at------------agatgatacatagagatga s panTro4.chr19 59679036 804 + 63644993 CACAGGGGCCATACAGGGAGTTA-G-AAAAGATGGAAAGAGCTAAAGGACACA----GACAGACAGACATGTCCCAGAGAGAGGTGTCCCTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACTTCCACAAAGTGTTCTCTACCATAAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCCTGTGGCACCTACAGATGCTGTGTTTATTCTGACACCTCTGCCTTCCATGCAATGGAGA-GTAATCGTCCCAGGATATCATGGCCC------------CAGAACACCAACCCCTGTATGCTGTGTGAACTTGCAGTCCCCAGACTGGATTCTGAGGCTCACATTCCAAATAACCCCACATATGATAGGATCACT-----------------Gagagacacagagagaaatcagggacaccaaaaagcaaagacataa--acacacagagaaagagccagaggaaggagattgagagactcacagacacataaagagagagaa---gagggcagagaagtggagacaatgatggaagagagcagagaAAACCACTAAAATTAGAGTCCTGAGGGCGAGGCACAAGGGCATAGAAAGATGGAGATGTGGGGATGAATTGCAGAGATTCC-AAAGAGAACTAGAGAGACCGAGAGGCAGAGCAagacagatgatagatggatagatagagatagatgatggatagata----tagatagatgataaat---aggtagatgatagataatag--------gttatagatacatagatgatgattg------attgattcattaatagatgatacatagagatga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56578914 845 + 60714840 CACAGGGGCCACACAGGGTGTTA-GAAAAAGAGATAAAGAGGTAAAGAAGACA--CAGAGAGACAGACATGTCCCAGAAAGAGGTGTCCTTCCATGTTGACTTTGTTCAGAGACCAGGCACAGGTTAGAAGATTCCATTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAAGAGACACATCTATCTGGCCTGAGTTGGGCCCTGTGGCCCCAGG-CTTGTGGCACCTACAGATGCTGTGTTTATTCTTAAACCTCTGCCTTCCATGCAGTGGAGCTGTCATCATCCCAGGACACCATGGCCCCAGGTGAGGGAGCAGAACAGCAACCCCTGTATGCTGTGAGTTCCTGGAGTCCCCAGACTGGATTCTGAGGCTCATATT-CAAATAACACCACATGTTATAGGATTGCTGAGAACAAAAGCCCACAGAGAGACACGGACTGAAATCAGGGAAATCAAAAAGCAAAGACATGAACACACACACAGAATGAGCCAGAAGAAGGGAATTGAGAGACTCACAGACACATAAAGAGATAGAAAAAGAGGGCAGAGAAGTGGAGCATATGATGGAAGGGAGCAAAGAAAAGCCCTAAAATCAGAGCCCTGAGGGAGGGGCACAAAAACAGGGAAAGATAAAGATGTGGGGATGGATTGCAGAGATTCCAAAAGGGAACTAGAGAGACTGAGAGGCAGAGAAAGACA-AGGA--GATGGAGAGAGACagatgatagatggatagatagatatagatagatgaaagataaaagatagatgatagataatagagagataggtgatagataaatagatgatgaatg------actgat--------agatgatatagatagataa i ponAbe2.chr19 C 0 N 0 s macFas5.chr19 55625052 821 + 59248254 CACAGGGACCATACAGCGTGTTAGG-AAAAGAGATAAAGAGGTAAagaagacacacagagagacagacaTGTCCCAGA-AGAGGTGTCCTTCCATGCCGACTTTGTTCAGAGACCAGGCACAGGTTAGAAGGTTCTGTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAAGAGACACGTCTATCTGGCCTGAGTTGGGCCCTGTGGCCCCAGG-CTTGTGGCACCTACAGATGCCATGTTTATTCTTAAACCTCTGCCTTCCATGCAGTGGAGCTGTCATCGTCCCAGGACACCATGGCCCCAGGTGAGGGAGCAGAACACCAACCCCTGTATGCTGTGAGTTCCTGGAGTCCCCAGACTGGATTCTGAGGCTCATATT-CAAATAACACCACATGTTATAGGATTACTGAGAACAAAAGCCCACAGAGAGACACGGAGTGAAATCAGGGAAACCAAAAAGCGAAGACATGAACACACACACAAAATGAGCCAGAAGAAGGGAATTGAGAGACTCACAGACATATAAAGAGATAGAAAAAGAGGGCAGAGCAGT-GAGCATATGATGGAAGGGAGCAGAGAAATGCCCTAAAATCAGAGCCCTGAGGGAGGGGCACGAAAACAGGGAAAGATAAAGATGTGGAGATGGATTGCAGAGATGCCAAAAGAGAACTAGAGAGACTGTGAGGCAGAGAA----A-AGGA--GAAGGagaaagacagat--------gatagatagatataaatggatgaaagataagagatagatgatagataacagagagataggtgatagataaatagatgatgaatg------actgat--------agacgat------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47696395 828 + 51301725 CACAGGGACCATACAGCGTGTTAGG-aaaagagataaagaggtaaagaagacacacagagagacagacatgtcccagagagagaTGTCCTTCCATGCTGACTTTGTTCAGAGACCAGGCACAGGTTAGAAGGTTCCATTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAAGAGACACGTCTATCTGGCCTGAGTTGGGCCTTGTGGCCCCAGG-CTTGTGGCACCTACAGATGCCATGTTTTTTCTTaaacctctgccttccatgcAGTGGAGCTGTCATCGTCCCAGGACACCATGGCCCCAGGTGAGGGAGCAGAACACCAACCCCTGTATGCTGTGAGTTCCTGGAGTCCCCAGACTGGATTCTGAGGCTCATATT-CAAATAACACCACACGTTATAGGATTACTGAGAACAAAAGCCCACAGAGAGACATGGAGTGAAATCAGGGAAATCAAAAAGCgaagacatgaacacacacacagaatgagcCAGAAGAAGGGAATTGAGAGACTCACAGACacataaagagatagaaaaagagggCAGAGCAGT-GAGCATATGATGGAAGGGAGCAGAGAAATGCCCTAAAATCAGAGCCCTGAGGGAGGGGCACAAAAACAGGGAAAGATAAAGATGTGGGGATGGATTGCagagatgccaaaagagaactagagagactgagaggcagagaa----a-agga--gaaggagaaagacagac--------gatagatagatataaatggatgaaagataagagatagatgatagataacagagagataggtgatagataaatagatgatgagtagacgatatagat--------agatgat------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47435720 806 + 50890351 CACAGGGGCCATACAGGGAGGTA-G-AAAACAGAGAAAGAGTTAAAGGGGACACTCAGACAGACAGACATGTCCCAGAGAGAGGCGTTCTTCCATGCTGACTTTGCTCAGAGACTTCGCACAGGTTAGAAGCTTCATTTCTGTGTTACCTCCACAAAGCGTT-TCTACCAGGAGAACCCAAGGACACGCATATTTCTGTCCTGAGTCAGCCCCTGTGGCCTCAGGCCTTGTGGCACCTACAGATTCCGTGTTTGTTCTAACACCTCTGCCTTCTGTGCAGTGAAGA-GTCATCGTCCCAGGATATCATGGACC------------CAGAACGCCAACCCCTGTATGCTGTGTGTACTTGGGGTCCCCGCACTGGATTCTGAGGCTCATATTCCACATAACCCCACATATGATAGGATTCCT-----------------GAGAGACACAGACAGAAATCAGGAACATCAAAAAGCAAAGACATAA--ACACACAGAGAATGAGCCAGAGGAAGGAGATTGAGAGACTCACAGACACATAAAGAGagag-gaaagagggcagaggagtggagagaatgatggaagggagcagagAAAAGCTCCAAAATCAGAACCCTGAGGGAGGGGTACAAAGACATAGATAGATAAAGATGTGGGGATGGATTGCAGAGATTCC-AAATAGAAGTACAAAGACTTAGAGGCAGAGAAAGACA-AGGA--GATGGagagagacagatggtagacggatagatagatatagatagatgataaat---aggtagatgatagatagt----ggatgggttatagatacatagatggcgactg------atagat--------agatgatacatagacatga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19893867 0 - 122678785 C e calJac3.chr22 3387862 632 - 49145316 I a score=74017.000000 s hg38.chr19_GL949747v2_alt 439248 183 + 729520 tgatgatgacgatgatgatg-----atagacacatagatatatacatagat-gatacataaatag--agacagagaggcagacagaga-------g-------gtaat-agagagagagatagatg-------------------atacatatata--gata----atagatgattgatggatagatagacagatagacaattgatagagagata--gataagtg--atacataa s panTro4.chr19 59679840 146 + 63644993 tgatgatga--------------------------agatagatggatagat-aATACATa----g--agatagagaggaagacaaaga-------ga------gaaatcatagagagagagagaTG-------------------ATACATatatatagata----atagatgattgatggataga------------caattgatagataaata--gat----g--acatagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56689972 192 + 60714840 tgatgatgatgaagatagaagacacacagataaatatatagatacatagat-gatacatagatag--agacagagaggcagacagata-------g-------gtaat-agagagagagatagatg-------------------atacagagatgtagataacacatagatgattgatggatgga----cagatagacaattgatagagagata--gataaatgatacatatat i ponAbe2.chr19 N 0 C 0 s macFas5.chr19 55625873 169 + 59248254 ---------------------atagatagagaagtagatagatagacagat-gatacataaagag--acatagagagacagaaagaca-------gacacgtgatgat-agatagatggatagata------------------catacatacat-----tgattgatagatgatagata-acaga----gagagaggtcatagatgcacagatgacgatagatg--atag---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47697223 173 + 51301725 ---------------------atagatagagaagtagatagatagacagat-gatacataaatag--acatagagagacagaaagaca-------gacacgtgatgat-agatagatggatagata------------------catacatacat-----tgattgatagatgatagata-acaga----gagagaggtcatagatacacagatgatgatagatg--atagatac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47436526 214 + 50890351 tgatgatag------------atagatagatagacagatagatagatagatagacacatagatagacacatagatagatacatagatacgtagatgatacatggagac-agagaggcagacagatagagagggaacagacagatgatacatagatatagataatagatagatggtgaatagataga----gagacagacaattgatagagagata--gataaatg--atacatag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19893867 0 - 122678785 C e calJac3.chr22 3387862 632 - 49145316 I a score=20880.000000 s hg38.chr19_GL949747v2_alt 439431 33 + 729520 atatagatga----tagataatttgtagatagacaca s panTro4.chr19 59679986 37 + 63644993 atatagacgacaggtagagaatttgtagataggcacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56690164 37 + 60714840 atatagatgacagatagataatttgtagatagacaca i ponAbe2.chr19 C 0 N 0 s nomLeu3.chr10_GL398297_2_random 0 37 - 21488 ATatagatgacaggtagagaatttgtagatagacacc i nomLeu3.chr10_GL398297_2_random N 0 C 0 s macFas5.chr19 55626042 18 + 59248254 atacatac-----atagataatt-------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47697396 18 + 51301725 atacatac-----atagataatt-------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47436740 37 + 50890351 atatagattacagatagataattgatagattgacagg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19893867 0 - 122678785 C e calJac3.chr22 3387862 632 - 49145316 I a score=420876.000000 s hg38.chr19_GL949747v2_alt 439464 302 + 729520 aaatagataaatagatagatcgatagataatagatagaaatgtgcagaaagttatgaacaagacagaaagtgagagactcaaaattaaagaaaaaggaagatcaagtcaaccaatccaaggagggtcagagag---------aataaaacaatccaaaaagggaaaacatacctcagggTGGGGAAGTGAGGTCATAGACCTagagagacagaaaaggtagaaggaggaaacagatatgaagagagatg-gggtggagagtgagagagagagagagagCATTAGGTCATAGAGCAGGGGAGTGAGTTCTCAG s panTro4.chr19 59680023 300 + 63644993 gaatagataaatagatagattgatagataatagatagaAATCTGCAGAAAGTTATGAACGGGTCACAAACTGAGAAACTCAGAGTTAAA--AAAAGTAACATCAAGTCAACCAATCCAAGGAGAGTCAGAGAG---------AATAAAACAATCCAAAAACGGAAAACATATGTAGAGGCAGGGAAGTGAGGTCAGAGACCTagagagacagagaaggcagaaggaggaaatagacatgaagagagttg-gggtggagggtgagagagagagagagagCATTAGGCCATAGAGCAGGGGAGTCACTTCTCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56579927 302 + 60714840 acatagataaat-gatagatcgatcaatagataatagaAATATGCAGAAAGTTATGAACAAGACAGAAAGTGAGAGACTCAGAATTAAAGAAAGAGGAAGATCAAGTCAACCCATCCAAGGAGGGTCAGAGAG---------AATAAAATCATACAAAAAAAGAAAACATAGCTAGGGATGGAAAAGTGAGGTCAGAGACCTAGACAGACAGAGAAGGTGGAAGGAGGAAATAGACATGAAGAGAGATGTGGGTGGAGGGTGAAAGAGAGAGAGAGAGCATTAGGTCATAGAGCAGGGGAGTGAGTTCTCAG i ponAbe2.chr19 N 0 C 0 s nomLeu3.chr10_GL398297_2_random 37 301 - 21488 aaatagataaatagatagcttgatagataatagatagaAATATGCAGAAAGTTATGAACAGGACACAAAGTGAGAAACTCAGAATTTAA--AAAAGTAACATCAAATCAACCAATCCAAGGAGAGTCAGAGAG---------AATAAAACAATCCAAAAAGGGAAAACATATCTAGAGGTTGGGAAGTGAGGTCagagacctagagagacagagaaggtggaaggaggaaatagacatgaagagagatgggggtggagggtgagagagagacagagagCATTAGGCCATAGAGCAGGGGAGTGAGTTCTCAG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55626060 283 + 59248254 ---------gatagatcgatcaatagataatagatagaAATATGCAGAAAGTTATGAATAAGACAGAAAATGAGAGACTCAGAATTAAAGAAAGAGGAAGATCAAGTCAACCAATCCAAGTAGGGTCAGAAAGGTCAGAAATAATAAAATGGTAC-AAAAGAGAAAACATAGATAGGGATGGGGAAGTGAAGTC----------agagacagagaaggtggaaggaggagacagacatgaagagagacg-gggtggagggtg--------agagagagCATTAGGCCATAGAGCAGGGGAGTGAGTTCTCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47697414 283 + 51301725 ---------gatagatcgatcaatagataatagatagaaataTGCAGAAAGTTATGaataagacagaaaatgagagactcagaattaaagaaagaggaagatcAAGTCAACCAATCCAAGTAGGGTCAGAAAggtcagaaataataaaatggtac-aaaaaagaaaacatagatagGGATGGGGAAGTGAGGTC----------agagacagagaaggtggaaggaggagacagacatgaagagagacg-gggtggagggtg--------agagagagcattaggCCATAGAGCAGGGGAGTGAGTTCTCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47436777 299 + 50890351 tagtagatagatagatcaatcgatagataatagatagaAATGTGCAGAAGGTTATCAACAAGACAGAAAGTGAGAAACTCCGAATTAAAGAAAAAGGAAGATCAAGTCAA-CAATCCAAGGAGGGTCAGAGAG---------AAGAAAACAATACAAAAAGGGAAAACACACCTCGGACTGGGGAAGTGAGGTCagagacctagagagacagagaaggtggaaggaggaaacagacatgaagagagatg-gggtggagagtg--agagacagagagagCATTAGGTCATAGATAAGAGGAGTGTGTTCTCAG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19893867 0 - 122678785 C e calJac3.chr22 3387862 632 - 49145316 I a score=76437.000000 s hg38.chr19_GL949747v2_alt 439766 44 + 729520 CTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACC--TCCCTGAGG s panTro4.chr19 59680323 44 + 63644993 CTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACC--TCCCTGAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56580229 44 + 60714840 CTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACC--TCCCTGAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 338 42 - 21488 CTCAG--GTGAAGGCAGCTGTGACAAGGAAGAACC--TCCCTGAGG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55626343 44 + 59248254 TTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACC--TCCCTGAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47697697 44 + 51301725 CTCAGATGTGAGGGGAGCTGTGACAAGGAAGAACC--TCCCTGAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47437076 44 + 50890351 CTCAGATGTGGGGGGAGCTGTGACAGGGAAGAACC--TCCCTGAAG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19893867 31 - 122678785 CTCAG-----------GTCAAGACAAGGCTGGACCAACCCTT---- i canFam3.chr1 C 0 C 0 e calJac3.chr22 3387862 632 - 49145316 I a score=211320.000000 s hg38.chr19_GL949747v2_alt 439810 93 + 729520 AAACTGCCTCTTCTCCTTCCAGGT---CTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCAAGGTTCAGGCAGGAGAGAGCGTGACCTTG s panTro4.chr19 59680367 93 + 63644993 AAAATGCCTCTTCTCCTTCCAGGT---CTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCAGGCAGGAGAGAATGTGACCTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56580273 93 + 60714840 AAACTGCCTCTTCTCCTTCCAGGT---CTATATGAGAAACCTTCTCTCTCAGCCCAGCCTGGCCCCACAGTCCAGGCAGGAGAGAGTGTGACCTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 380 93 - 21488 AAACTGCCTCTTCTCCTTCCAGGT---CTATATGGGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCATGCAGGAGAGAATGTGACCTTG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55626387 93 + 59248254 AAACTGCCTCTTCTCTTTCCAGGT---CTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCAGGCAGGAGAGAACGTGACCTTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47697741 93 + 51301725 AAACTGCCTCTTCTCCTTCCAGGT---CTATATGCGAAACCTTGTCTCTCAGCCCAGCCAGGCCCCATGGTGCAGGCAGGAGAGAACGTGACCTTG i papAnu2.chr19 C 0 I 17767 s chlSab2.chr6 47437120 93 + 50890351 AAACTGCCTCTTCTCCTTCCAGGT---CTATATGAGAAACCTTCTCTCTCAGCCCAGCCAGGCCCCACGGTTCAGGCAGGCGAGAACCTGACCTTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3388494 93 - 49145316 AATCAGCCTCTTTTCCTCCCAGGA---AAACACAAAAAGCCTTCTCTCTCCACCCAGGAGGACCCCAGGATGGGGTTGGGATGGAACGTGACATTA i calJac3.chr22 I 632 C 0 s canFam3.chr1 19893898 95 - 122678785 -ACCTACCCTTCCTCTCTCTAGGACAGCTCTCCTATACACCCTCCTTACGGGTGCATCCAGGACCCACGGTGGCCCCAGGAGAGAATGTGACCCTG i canFam3.chr1 C 0 C 0 a score=464425.000000 s hg38.chr19_GL949747v2_alt 439903 232 + 729520 TCCTGTAGCTCCCGGAGCTCCTATGACATGTACCATCTATCCAGGGAGGGGGGAGCCCATGAACGTAGGCTCCCTGC-----AGTGCGCAAGGTCAA--CAGAACATTCCAGGCAGATTTCCCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCCGTCACTCTCCCTACGAGTGGTCAGACCCGAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGAAAA s panTro4.chr19 59680460 232 + 63644993 TTCTGCAGCTCCCGGAGCTCCTATGACATGTACCATCTATCCAGGGAGGGGGAGGTCCATGAACGTAGGCTCCCTGC-----AGTGCGCACCATCAA--TGGAACATTCCAGGCAGACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGACGCTCCCTACGAGTGGTCAAACTCGAGTGATCCACTGCTTGTTTCCGTCACCGGTGAGGAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56580366 232 + 60714840 TCCTGCAGCTCCCGGAGGTCCTATGACATCTACCATCTATCCAGGGAGGAGGGGGGCCATGAACTTAGGCTCCCTGC-----AGTGCCCAAGGTCAA--CGGAACATTCCAGGCAGACTTTCTTCTGGGCCCTGCCA------CCCATGGAGGGACCTACAGGTGCTTCGGCTCTTTCCGTGACTCTCCCTACGAGTGGTCAAAGTCGAGTGACCCACTGCTTATTTCTGTCACAGGTGAGGAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 473 232 - 21488 TCCTGCAGCTCCAGGAGCTCCTATGACGTGTACCATCTATCCAGAGAGGAGGGGGGCCATGAACGTAGGCTCTCTGC-----AGTGCTCAAGGTCAA--CGGAACATTCCAGGCAGACTTTCCTCTGGGCCCTGCCA------CTCACGGAGAGGCCTACAAATGCTTCGGCTCTTTCCGTGACTCTCCCTACGAGTGGTCAGACCCGAGTGACCCACTGCCCGTTTCTGTCACAGGTGAGAAAA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55626480 232 + 59248254 TCCTGCAGCTCCCAGAGCTCGTTTGACATTTACCGTCTATCCAGGGATGGGGAGGCCCATGGACTTAGGCTCCCTGC-----AGTGCCGAGGGTCAG--TGGAACATTCAAGGCTGACTTTCCTCTGGGCCCTGCAA------CCCACGGAGGGAACTACAGATGCTTTGGCTCTTTCCGTGCCCTGCCCTATGTGTGGTCACACCCGAGTGACCCACTGCCCATTTCTGTCACAGGTGAGGAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47715601 225 + 51301725 TCCTGCAGCTCCCAGAGCTCATTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCCATGAACTTAGGCTCCCTGC-----AGTGCCCAGTGTCCA--TGGAATGTTCCAGGCCGACTTCCCTCTGGG-------A------CCCATGGAGGGACCTACAGATGCTTTGACTCTTTCCGTGCCCCATCCTTCGAGTGGTCAGACCTGAGTGACCCACTGCCCGTTTCTGTCACAGCTGAGGAAA i papAnu2.chr19 I 17767 C 0 s chlSab2.chr6 47437213 232 + 50890351 TCCTGCAGCTCCCAGACCTCCTTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCCGTGAACTTAGTCTCTCTGC-----AGTGCCAAGCGTCAA--TGGAACATTCCAGGCCAACTTCCCTCTGGGCCCTGCCA------CCCACGGAGGAACCTACAGATGCTTCGGTTCTTTCCGTACCGCACCCTACAAGTGGTCAGACCCGAGTGACCCACTGCCCGTTTCTGTCACAGGTGAGGAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3388587 238 - 49145316 TTCTGCATCTCTGAAATCTCATTTGACCGGTACCATCTGTGGAGAGAGGGGGCTCCTTATGGCCAGTGGCTCAGTGG-----AGGGCAGGGACACAG--GGGAGCGTTCCAGGCCAACTTTTCTGTGGGCCTCGCAACGCCAGCCCATGGAGGGACCTATAGATGCTACGGTTCTTTCAATGCCTCCCCCTATGAGTGGTCGGCCCCCAGTGAGCCCCTGCACCTTTCTGTCACAGGTGAGGAGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19893993 238 - 122678785 CTGTGTCAGTCACTGAGCAATGTGGACACATTCCTTCTGTCCAAGGATGGGGCAGCTGAT-------GCCTCCTTGCGTCTTAGATCGAAGTACCGAGCTGGGAAGTACGAGGCTGAATTCTCCATGAGTCCTGTGACCCCAGCCCATGGGGGGACCTACAGGTGCTACGGCTCTATCAAAACCTCTCCCTACCTGTTGTCATACCCCAGTGTCCCCGTGGAGATCCTGGTCTCAGGTGAGTAGC i canFam3.chr1 C 0 I 4 a score=64669.000000 s hg38.chr19_GL949747v2_alt 440135 31 + 729520 GCCCATATCTCTCTCATGTCCTATGATCCTA s panTro4.chr19 59680692 31 + 63644993 CCCCATACCTGTCCCATGTCCTATGATCCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56580598 31 + 60714840 GCCCATGCCTGTCCCATGTCTTATGATCCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 705 31 - 21488 CACCCTGCTTGTCCCATGTCTTGTGATCCTA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chr19 60527047 31 + 64156825 GCCCATGTCTGTCCCATGTCTTATGACCCTA i rheMac3.chr19 N 0 I 167 s macFas5.chr19 55626712 31 + 59248254 CCCCATGCCTGTCCCACGTCTTGTAATCCTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47715826 31 + 51301725 GCCTATGCCTGTCCCATGTCTTATGACCCTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47437445 31 + 50890351 CCCCATGCCTGCTCCATGTCTTTTGATCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3388825 29 - 49145316 --CCAAGCCTGCTGCATGCTCTGGGGCCCAC i calJac3.chr22 C 0 I 9 s canFam3.chr1 19894235 28 - 122678785 GCCCCTGTCCCCTCCATGTGCTAACATT--- i canFam3.chr1 I 4 C 0 a score=494256.000000 s hg38.chr19_GL949747v2_alt 440166 289 + 729520 AATCCTTAGCTAAGGAGCTTCCTGCTGATGAT--GGAGA----------------------AAAGCATGGACAGATGC--AGAGAGAAG-ACACAGCA--GGTGTGAGGGCGGAG---TCAGGGCG-CAGGATGGCAGACAGGGCACCTCCAA----ACCCTCCTTCAT---GGCCTGCATGGAGGCCTCCGATCAGGGCTCCAGGCACCCAGGCAGAT-----GGAGAAAGCGG-----TCAGGACAGACCCAGAGAAGGGGAGACTGGGCTTAG----------TTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAATC-TTACCCATTTCCCAGAAGCC------CATCATG s panTro4.chr19 59680723 291 + 63644993 GAGCCTTAGCTGAGGAGCTTCCTGCTGATGAT--GGAGA----------------------GAAGCATGGACAGATGC--AGAGATAAG-ACGCAGCATGCGTGTGAGGGAGGGA---TCAGGGCG-CAGGACGGCAGACACAGCACCTCCAA----ACCCTCCTGCAT---GGCCTGCATGGAGGCCTCCGATTAGGGCTCCAGGCACCCAGGCAGAT-----GGAGAAAGCGG-----TCAGGAGACACCCAGAGAAGGGGAGACTGGGCTCAG----------TTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACC-TTACCCATTGCCCAGAAGCC------CTTCCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56580629 290 + 60714840 GAGCCTTAGCTGAGGAACTTCCTGCTGATGAT--GGAAA----------------------GAAGGATGAACAGATGC--AGAGAGAAG-ACGAAGCCTGGGTGTGAGGCCGGGG---TCAGGGCA-CAGGATGGCAGACACGGCACCTCCAA----ACCCTCCTGCAC---GGCCTGCATGGAGGCCCGCGGCCAGGGCTCCAGGCACCCAGGCAGAT-----GGAGAAAGCGG-----TCAGAATAGACCCAGAGGA-GGGAGACTGGGCTCAG----------TTTGGGGAGATCAGAGGTTTCCTCAGCCCCTCAACC-TTACCCATTTCCCAGAAGCC------CATCCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 736 293 - 21488 GAGCCATAACTGAGGAGCTTCCTGCTGATGGT--GGAGA----------------------GAAGGATGGACAGATGCCGAGAGAGAAG-ACAAAGCCTGGGTGTAAGGGCGGGG---TCAGGGCA-CGGGATGGCAGACAGGACACCTCCAA----ACCCTCCTGTAC---GGCCTGCATGGATGCCTGCAGTCAGGGTTCCAGGCACCCAGGCAGAT-----GGAGAAAGCAG-----TCAGGATAGACCCAGAGAA-GGGAGACTGGGCTCAG----------TTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACTGTTACCCATTTCACAGAAGCC------CATCCTG i nomLeu3.chr10_GL398297_2_random C 0 I 15579 s macFas5.chr19 55626743 291 + 59248254 GAGCCATAGCTGAGGAACTTCCTGCTGATGAT--GGAGA----------------------GAAGCATGGACAGATGC--AGAGAGAAG-ACAAAGCCTGGGTGTGAGGGTGGGT---TCAGGGCG-CAGGATGGCAGACAGGGCACCTCCAA----ACCCTCCTTCAC---AGCCCACATGGAGGCCCGCGTTCAGGGCTGTCGGCACCCAGGCAGAT-----GGAGAAAGCTG-----TCAGGACAGACCCAGAGGTGGGGAGACTGGGCTCAG----------TTTGGGGAGATCTGAGGTTCCCTCAGCCCCTCAACC-TTACTTATTTCCCAGAAGCC------CATCCCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47715857 291 + 51301725 GAGCCATAGCTGGGGAGCTTCCTGCTGGTGAT--GGAGA----------------------GAAGCATGGACAGATGC--AGAGAGAAG-ACGAAGCCTGGGTGTGAGGGGGGAA---TGAGGGCA-CAGCATGGCAGAGAGGGCACCTCCAA----ACCCTCCTGCAT---GGCCTGCGTGGTGGTCCGCGGTCAGGGCTCCAGGCACCCaggcagat-----ggagaaactgg-----TCAGGACAGACCCAGAGGAGGGGAGACTGGGCTCAG----------TTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACC-TTACCCATTTCCCAGaagcc------caccctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47437476 290 + 50890351 GAGCCATAGCTGAGGAGCTTCCTGCTGATGAT--GGAGA----------------------GAAGCATGGACAGGTTC--AGAGAGAAG-ACCAAGCTTCGGTGTGAGGGTGGGA---TCAGGATG-CAGGATGGCAGAGAGGGCACCTCCAA----ACCCTCCTGCAT---GGCCTGCGTGGTGGTCCGCGGTCAGGGCTCCAGGCACCCAGGCAGAT-----GGAGAAACTGG-----TCAGGGCAGACCCAGAGGA-GGGAGACGGGGCTCAA----------TTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACC-TTACTCATTTCCCAGAAGCC------CATCCCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3388863 315 - 49145316 GAGCTAAATGTGAGGGGCATCCTACCAGAGATCAGGAGATCTTAGGGGTTCTGGTCAAAAGGAAGCCATGAGAAATAC--AGAGGAAAA-GAGAGGCTGAGAATGGCCAGTGCTG---TCAGGGTGATAGGACAGGAATCAGGGCACTTCCAC----ACCCTTGTCCAC---GTCCTATATGGAGACCCACTTTGGGGGC-CTATGAATCCAGGTGAAT-----GAAGAACTGGG-----TGAGTCAAACACTGGAGGAGGGGAGACCAGATAAAG----------ATTGGGAAGATCAGGGGTTGCATCAGCCCCTCACCC-TTATCCATTTTCCAGGAGCT------CCTCCTG i calJac3.chr22 I 9 C 0 s canFam3.chr1 19894263 257 - 122678785 ------------------------------------------------------------GTTCTCAGGGCCCTGTGC--CCACAAAAGCACAGGGCTGGGATGGGAGAGGGGGGCTCTGAGGGGT-C----------------CACCCCTCACACTGCCCTCCTACACCTGGTTCTTCTCTCGACCCCGTCACCAGAATTCT------CCAGGTGGAGGAGGAGGAGTACCTGGGGACCTCAGGGTAAATAAGGAGGA--GGAGTGTGAGCATAGGCAGGGTCTCTGTGGGAAGCTC-----------TAGCCTCCTCTCC-TGACTTTTTTCCCAGGATCCTTTGGACACCATG i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60527078 167 + 64156825 I a score=42268.000000 s hg38.chr19_GL949747v2_alt 440455 14 + 729520 GCCTCTCACCCACA s panTro4.chr19 59681014 14 + 63644993 GCCTCTCACCCACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56580919 14 + 60714840 GCCTCTCACCCACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 16608 14 - 21488 GCCTCTCACCCACA i nomLeu3.chr10_GL398297_2_random I 15579 C 0 s macFas5.chr19 55627034 14 + 59248254 GCCTCTCACCCACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47716148 14 + 51301725 gcctctcacCCACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47437766 14 + 50890351 GCCTCTCACCCACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3389178 14 - 49145316 ACCTCTCAGACACA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19894520 14 - 122678785 GCCCCCCACCCACA i canFam3.chr1 C 0 T 778 e rheMac3.chr19 60527078 167 + 64156825 I a score=10301.000000 s hg38.chr19_GL949747v2_alt 440469 12 + 729520 CAGAGAGATATC s panTro4.chr19 59681028 10 + 63644993 C--AGAGATGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56580933 10 + 60714840 C--AGAGATGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 16622 10 - 21488 C--GGAGATGTC i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55627048 10 + 59248254 G--AGAGATGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47716162 10 + 51301725 G--AGAGATGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47437780 7 + 50890351 C--AGACAT--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3389192 10 - 49145316 G--AGAGATTTC i calJac3.chr22 C 0 T 1795 e canFam3.chr1 19894534 778 - 122678785 T e rheMac3.chr19 60527078 167 + 64156825 I a score=131229.000000 s hg38.chr19_GL949747v2_alt 440481 86 + 729520 ATCACCAGCAACCCCTA-CACCCTTTTCTTTTCATTTTCAAAAATAtttattgaggttaaatgtaactatataatttaccaccttta s panTro4.chr19 59681038 86 + 63644993 ATCACCAGCAACCCCTA-CATCCTTTTCTTTTTGTTTGAAAAAATATTTATTGAGGTTAAATATACCTATATAGCTTACCACCTTTA i panTro4.chr19 C 0 I 91636 s ponAbe2.chr19 56580943 86 + 60714840 ATCACCAGCAACCCCTA-CACCCTTTTCTTTTTGTTTGAAAAAATAtttattgaggtgaaatatacccatatagcttaccaccttta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 16632 86 - 21488 ATCACCAGCAACCCTTA-CACCCTTTTCTTTTTGTTTGAAAAAATAtttattgtgattaaatatacctatatagcttaccaccttta i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55627058 86 + 59248254 ATCACCAGCAACCCCTA-CACCCTTTTCTTTTCATTTGGAAAAGTAtttattgaggtgaaatatacctatataatttaccaccttta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47716172 87 + 51301725 ATCACTAGCAACCCCTAGGACCGTTTCCTCtttgtttgaaaaattatttattgaggtTTAATACACCTATATAGTTTaccactttta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47437787 86 + 50890351 ATCACCAGGAACCCTTA-CACCCTTTCCTTTTCATTTGAAAAAAtaattgttgaggttaaaaatacctataaaattgaccaccttta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e rheMac3.chr19 60527078 167 + 64156825 I a score=6623.000000 s hg38.chr19_GL949747v2_alt 440567 8 + 729520 cca---ttttt s panTro4.chr19 59772760 8 + 63644993 cca---ttttt i panTro4.chr19 I 91636 C 0 s ponAbe2.chr19 56581029 8 + 60714840 aca---ttttt i ponAbe2.chr19 C 0 I 13535 s nomLeu3.chr10_GL398297_2_random 16718 8 - 21488 aca---ttttt i nomLeu3.chr10_GL398297_2_random C 0 I 4 s macFas5.chr19 55627144 8 + 59248254 cca---ttttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47716259 10 + 51301725 acatt-ttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47437873 11 + 50890351 ttaccattttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e rheMac3.chr19 60527078 167 + 64156825 I a score=-3376.000000 s hg38.chr19_GL949747v2_alt 440575 2 + 729520 -aa s panTro4.chr19 59772768 2 + 63644993 -aa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 16730 1 - 21488 -g- i nomLeu3.chr10_GL398297_2_random I 4 C 0 s macFas5.chr19 55627152 2 + 59248254 aa- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47716269 2 + 51301725 tg- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47437884 2 + 50890351 aa- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e ponAbe2.chr19 56581037 13535 + 60714840 I e calJac3.chr22 3389202 1795 - 49145316 T e rheMac3.chr19 60527078 167 + 64156825 I a score=15711.000000 s hg38.chr19_GL949747v2_alt 440577 13 + 729520 aagtaaaatctag s panTro4.chr19 59772770 13 + 63644993 aagtaaaatctag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594572 13 + 60714840 aagtaaaatctag i ponAbe2.chr19 I 13535 C 0 s nomLeu3.chr10_GL398297_2_random 16731 13 - 21488 aggtggagtctag i nomLeu3.chr10_GL398297_2_random C 0 T 15322 s macFas5.chr19 55627154 13 + 59248254 gtgtgaagtctac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47716271 13 + 51301725 aggcgaagtctag i papAnu2.chr19 C 0 T 17763 s chlSab2.chr6 47437886 13 + 50890351 gtgtaaagtctag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e rheMac3.chr19 60527078 167 + 64156825 I a score=24035.000000 s hg38.chr19_GL949747v2_alt 440590 21 + 729520 tggtcataaatacctttataT s panTro4.chr19 59772783 21 + 63644993 tggtcataaatacctttataT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594585 21 + 60714840 tggtcataaatacctttataT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55627167 21 + 59248254 tgttcataaatacatttatag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47698521 21 + 51301725 TGttcataaatacatttatag i papAnu2.chr19 T 17763 C 0 s chlSab2.chr6 47437899 21 + 50890351 tggtcataaatacatttatat i chlSab2.chr6 C 0 T 58637 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10_GL398297_2_random 16744 15322 - 21488 T e rheMac3.chr19 60527078 167 + 64156825 I a score=311071.000000 s hg38.chr19_GL949747v2_alt 440611 278 + 729520 gctgggcgtggtggttcacagttgtaatctcggcgctttgagaggccaaggaaggtggatcatttaagatcaggaactcgagatcaccctggccaacatgtgggaaattcatctttactaaacagacaa--------------------------gaaaaattagccgagcatgctggcatgcacctgtagtcctagctacttgggaggctgaggcaggagaagcacttaaagccaggaggccgaggttgcactgagccgagatcatgccactgcactgcagcctgggagacagagagagactc s panTro4.chr19 59772804 278 + 63644993 gctgggtgtggtggttcacggttgtaatctccgcactttgagaggccaaggaaggtggatcatttaagatcaggaactcgagatcaccctggccaacatgtgggaaattcatctttactaaacagacaa--------------------------gaaaaattagccaagcatgccggcatgcacctgtagtcctagctacttgggaggctgaggcaggagaagcacttaaacccaggaggcagaggttgcactgagccgagatcatgccactgcactgcagcctgggagacagagagagactc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594606 278 + 60714840 gctgggtgcagtggctcatggttttaatcttggcgctttgagaggccaaggaaggcggatcatttaagatcaggggctcaagatcagcctggccaacatgtgggaaattcatctttactaaacagacaa--------------------------gaaaaattggccaggcatgctggcctgcacctgtagtcctagctacatgggaggttgaggcaggagaagcacttaagcccaggagacagaggttgcactgagccgagatcatgccactgcactgcagcctgggagacagagagagactc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55627188 286 + 59248254 gccgggcacggtggctcacggttgtaatcccaacactttgagaggccaaggcaggtggatcatttgagatcagggactcaagaccaccctggccaacgtggggaaaatccatctgtactaaaaatacaa------------------aataataataataattagccgagcatggtggcacatgcctgtagtcccaactacttgggagggttaggcaggagatgcacttagttgcaggaggcacaggttgcagtgagccgagatcatgccactgcactgcagcctgggagacagacagagacac i macFas5.chr19 C 0 I 12 s papAnu2.chr19 47698542 286 + 51301725 gctgggcacagtggctcacggttgtaatcccaacactttgagaggccaaggcaggtggatcatttgagatcagggactcaagaccaccctggccaacgtggggaaaatccatctgtactaaaaatacaa------------------aataataataataattagccgagcatggtggcacatgcctgtagtcccagctacttggaagggttAGGCAGGAGATGCACTTAGTtgcaggaggcacaggttgcagtgagccaagatcatgccactgcactgcagcctgggagacagagagagacac i papAnu2.chr19 C 0 I 17828 s chlSab2.chr6 47379283 304 + 50890351 gccgggcactgtgactcacggttgtaatcccaacactttgagaggctaaggcaggtggatcttttgagatcagggactcaagaccaccctggccaacgtggggaaaatccatctgtactaaaaatacaaaataataataataataataataataataataattagccgagcgtggtggcacatgcctgtagtctcagctacttggaagggttaggcaggagatgcacttagttgcaggaggcagaggttgcagtgagccaagatcatgccactgcactagagcctgggagacagagagagacac i chlSab2.chr6 T 58637 I 4 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10_GL398297_2_random 16744 15322 - 21488 T e rheMac3.chr19 60527078 167 + 64156825 I a score=4658.000000 s hg38.chr19_GL949747v2_alt 440889 31 + 729520 tgtttctaaataaataaaTAC-ATCTATATTC s panTro4.chr19 59773082 31 + 63644993 tgtttctaaataaataaaTAC-ATCTATATtc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594884 31 + 60714840 tgtctctaaataaataaaTAC-ATCTATATTC i ponAbe2.chr19 C 0 T 13489 s macFas5.chr19 55627486 30 + 59248254 AATTAATTAATTAATtagtacttttttttt-- i macFas5.chr19 I 12 C 0 s papAnu2.chr19 47716656 29 + 51301725 tgtgtatatatatgtgtgtac-atatatat-- i papAnu2.chr19 I 17828 C 0 s chlSab2.chr6 47379591 21 + 50890351 tcaaaaTTAATTAATTAGTAT----------- i chlSab2.chr6 I 4 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10_GL398297_2_random 16744 15322 - 21488 T e rheMac3.chr19 60527078 167 + 64156825 I a score=5668.000000 s hg38.chr19_GL949747v2_alt 440920 9 + 729520 -TTTTTTTTG s panTro4.chr19 59773113 9 + 63644993 -ttttttttg i panTro4.chr19 C 0 T 91628 s ponAbe2.chr19 56581426 8 + 60714840 -tttttttt- i ponAbe2.chr19 T 13489 C 0 s macFas5.chr19 55627516 9 + 59248254 ttttttttt- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47716685 9 + 51301725 atatttttt- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47379612 8 + 50890351 -TCTTTTTT- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10_GL398297_2_random 16744 15322 - 21488 T e rheMac3.chr19 60527078 167 + 64156825 I a score=139184.000000 s hg38.chr19_GL949747v2_alt 440929 115 + 729520 ttaccctccacccttcccttcctggcctctggtgtccaccattgtattctccaccttcatgagatccaccttttatctcctgcatgtgggtgagaaatgggaatctttgtaatga s panTro4.chr19 59681494 115 + 63644993 tTATcctccacccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgtatatgggtgagaaatgagaatctttgtaatga i panTro4.chr19 T 91628 C 0 s ponAbe2.chr19 56581434 115 + 60714840 ttAccctccacccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttcgctcctgtatatgggtgagaaatgggaatctttgtaatga i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55627525 115 + 59248254 ttaccctccacccttcccttcctggcctctggtagccaccattctactctctactttcatgagatccaccttttagctcctgcatatgagtaagaaatggaaatacttgtaatga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47716694 114 + 51301725 taaccctcctcccttttcttcctggcctctggtagccaccattctactctctaccttcatGAGAT-CACCTTTTAGCTCCCGCCTATGGGTGAGAAATGGGAATCTTTGTAATGa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47379620 115 + 50890351 TTAccctccacgcttcccttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgcatatgagtgagaaatggaaatacttgtaatga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10_GL398297_2_random 16744 15322 - 21488 T e rheMac3.chr19 60527078 167 + 64156825 I a score=393904.000000 s hg38.chr19_GL949747v2_alt 441044 240 + 729520 cctccagttccatccatgtggctgcaaatgacaggatgttattgtttctatggatgagtagtctccactgtgtgtgtgtaccacagt-tctctatccattcacccactgataggcaggtaggttgactccacatcttggctactgtgaacagtgctggaacagtcatatgagtgcagatatcacttcgatacactgatgtcctttcctttggatataaacccagtagtgaaattgctggat s panTro4.chr19 59681609 241 + 63644993 cttccagttccatccatgtggctgcaaatatcaggatgttattctttctatggatgagtagtctcctctatgcgaacgtactacattctctctatccattcatccactgatgggcaggtaggttgactccacatcttggctactgtgaacagtgctgcaccaatcatacaagtgcagatatcacttcgatacattgatttactttcctttggatataaacccagtagtgaaattgctggat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56581549 240 + 60714840 cctccagttccatccatctagctgcaaatgacaggatgttattctttctatggatgagtagtctccactgtgcgtatgtactacagt-tctctatccattcacccactgatgggcaggtaagttgactccacatcttggctacggtgaacagtgctgcaccaatcatacaagtgcagatatcacttcgatatattgatttcctttcctttggatataaacccagtagtgaaattgctggat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 1422 239 - 21488 cctccagttccatccatgtgggtgcaaatgacagggtgttattgtttctatggatgagtagtctccactgtgtg--tgtactacattctctctatccattcacccactgacgggcaggtaggttgactccacatcttggctactgtgaacagtgctggaacagtcatacgagtgcagatatcacttcgatatattgatttcctttccttcggatataaacccagtagtgaaattgctggat i nomLeu3.chr10_GL398297_2_random T 15322 C 0 s macFas5.chr19 55627640 241 + 59248254 cctccagttccatccatgtggctgcaaatgtcaggatgttattgtttctatggatgagtagtctccagtgtgtgtatgtactacattctctctatccattcacccactgaggggcaggtaggttgactccacatcttggctactgtgaactgtgctagaacagtcataggagtgcagctatcacttcgatacactgaagtcctttccttttggtttacacccagtcgtggaattgctagat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47716808 241 + 51301725 gctccagttccatccatgtggctgcaaatgTCAGGGTGTTATTGTCTCTATGGATGAGTAGTCTCCACTGTGTGTATGTACTACATTCTCtctatccattcacccactgagGGGCAGGTAGGTTGCCTCCAcgtcttggctactgtgaacagtgctggaCCAATCATACGAGCGCAGATATtacttcaatatactgatttcctttcctttggataaaaacccagtagtgaaattgctAGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47379735 241 + 50890351 cctccagttccatccatgtggctgcaaatgtcaggatgttattgtctctatggatgagtagtctccactgtgtgtatgtactacattctctctatccagtcatccactgaggggcaggtaggttgtctccacatcttggctactgtgaactgtgctagaacaatcatgggagtgcagatgtcacttcaatacactgaagtcctttccttttggtttacacccagtcgtggaattgctagat i chlSab2.chr6 C 0 I 58817 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e rheMac3.chr19 60527078 167 + 64156825 I a score=403676.000000 s hg38.chr19_GL949747v2_alt 441284 401 + 729520 actatgaaagttctcttttt-----------------tttttttttcttttttgagaaagagtttccctcc--ttagtccaagctggagtctaagtggtgagatcttggctcattgcaacctgtgcctcctaggttcaaatgattgtcctgactcagcctccctagtagctgtgattacaggtgcatgccaccatgcctggctaatttttgtatttttttagcacagacgggatatcccaattttgggcaggctgctctcaaactcctgacctcaagtgaggtgcctgcctcggtttcccaaagtgctgaaattacaggcataagccactatgcccagcctccttttagttttttaaagaatttccatacttttctcc---ataatagttgtactaatttacattcctaccaacagggtacca s panTro4.chr19 59681850 413 + 63644993 actatgaaagttctctttttagtttttcgtttgttg-ttttgtttttgtttttgaga--cagtttccctct--gt-gcccaggctggagtacaagtgatgtgatcttggctcattgcaacctccacctcctgggttcaaatgattttcctgcctcagcctccctagtagctgggattacaggtgtacgccaccatgcctggctactttttg-gtttttttagtatagatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgaggtgtccgccttggtctcccaaagtgccgggattacaggcatgatccaccccatccaacctctttttagttctttaaaggacttccatacttttctcc---gtaatggctgtactaatttacactcctaccaatagggtacca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56581789 414 + 60714840 actatgacggttctctttttagtttttcgtttgttgtttttgtttttgtttttgaga--cactttccctct--gt-gcccaggctggagtacaagtgatgtgatcttggctcattgcaacctccgcctcctgagttcaaacgattttcctgcctcagcctccctagtagcagggattacaggtgcacgccaccatgcctggctactttttg-tattttttagtatagatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgaggtgcccgcctcgttctcgcaaagtgctgggattacaggcgtgatccaccgcacccaacctctttttagttctttaaaggactttcatacttttctcc---gtaatggctgtactaatttacactcctaccaacagggtacca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 1661 414 - 21488 actatgaaagttctctttttagtttttcgtttgttgtttttgtttttgtttttgaga--cagtttccctct--gt-gcccaggctggagtgcaagtgatgtgatcttggcccattgcaacctccgcctcctgggttcagacgattttcctgcctcaccctccccagaagcaggcattacaggtgcaagccaccatgcttggctacttttta-tattttttagtatagatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgaggtgcctgcctcggtctcgcaaagtgctgggattacaggcatgatccaccgcacccaacctctttttagttatttaaaggacttccatgcttttctcc---gtaatggctgtactaatttacactcctaccaacagggtacca i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55627881 409 + 59248254 cctgtgcaagttgactttttacgttttgttttatggtttttgtttt-tttttagaca--gagtttcattcttgtt-gcccaggctggagtgc-cgtggcgccatctgggctcactgcaacttgcacctccgggattcaagagattccccagcctcagcctcctgagtagctgagattactggctcccaccaccacactcagctaat--------atttttagtagagatggggtttctctatattggccaggctgctcttcaagtcctgacctcaagtgatctacccacctcggcctcctaatgtgctgggattacaggcatgaaccaccgtgcccaacctcattttattt-tttgaggaacttccatactcttctcctctgtaatggctgtactaatttacattcatatcaacagtgtaCCA i macFas5.chr19 C 0 I 5 s papAnu2.chr19 47717049 413 + 51301725 ACTATGAaagttctctttttagtttttcatttgttgtttttgttttggtttttgaga--cagtttccctct--gt-gcccaggttggagttcaagTGATGTGATCttgcctcattgcaacctccaccccctgggttcgaatgattttcctgcctcagcctccctagtagctgggattacaggtgcatgccaccatgcctggctactttttg-tactttttagtacagatggggtttccccatgttggccaggctgctctcaaactcatG-CCTCAAGTGAGGTGCCCACCTCagtctcgcaaagtgctgggattacaggtgggagccactgcgcccaatctatttttagttatttaaaggAGTTCCATACTTttctcc---ataatggctgtactaatttacactcctaccaacagggTACCA i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e chlSab2.chr6 47379976 58817 + 50890351 I e rheMac3.chr19 60527078 167 + 64156825 I a score=222242.000000 s hg38.chr19_GL949747v2_alt 441685 302 + 729520 gggttctcctttctctaccatcttgccagcatttgttttgcctgtcttgcagataaaagcc--------------------------attttactttactttattttattt-attt--atttatgttgagatggagtttcactcatagtcgcccaggctggagtgcaagggtgtgatctcagctcactgcaacctccgcctcccgcgttcaactgattctcctgcctcagcctccaaagtagctgggattacaggcgtgtgccaccacgcctagctaatttttgtatgtttagtagagagggagtttctccatgatggtcaggctggtctc s panTro4.chr19 59682263 289 + 63644993 gggttctcctttctctaccaccttgccagcatttgttttgcctgtcttgcagctaaaagcc--------------------------attttattttatttcattttattt---------------tgagatggagtttcgctctt-gtcacccaggctggagtgcagtggcgcgatctcggctcaccgcaacctccacctcccaggttcaagcgattctcctgcctcagcctcccgagtagctggaattacaggcacactccaccacgcccgactaattttcgtatttttagtagagacagcgtttctccatgtgggtcagactggtctc i panTro4.chr19 C 0 I 6 s ponAbe2.chr19 56582203 294 + 60714840 gggttctcctttctctacccccttgccagcatttcttttgcctgtcttgcagctaaaagcc--------------------------gttttattttattttattttattt----------tattttgagatggagtttcgctctt-gtcacccaggctggagtgcagtggcgcgatctcagctcaccgcaacctccacctcccaggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcacacaccaccatgctcgtctaatttttgtatttttagtagagacagtgtttctccatgtgggtcaggctggtctc i ponAbe2.chr19 C 0 I 55727 s nomLeu3.chr10_GL398297_2_random 2075 330 - 21488 gggttctcctttctctaccaccttgccagcatttgttttccctgtcttgcagctaaaagcctttattttattttattttattttattattttattttattttattttattttattttattttattttgagatggagttttgctctt-gtcacccaggctggagtgcagtggcgcgatctcagctcaccgcaacctccatctcccaggttcaagtgattctcctgccttagcctcccaagtagctggaattacaggcacaggccaccacgcgcggctaatttttgtatttttagtagagacagtgtttctccatgtgggtcaggctggtctc i nomLeu3.chr10_GL398297_2_random C 0 I 6 s papAnu2.chr19 47717462 313 + 51301725 GGGTTCTCCTTTCTCTACcaccttgccagcatttgttttgCCTGTCTTGCAGCtaaaagcc-------------attttatttt---attttattttattttattttattttattttattttattttgagatggagttgtgctctt-gtcacccaggctggagtgcagtggcgcgatctcagctcaccgcaacctccacctcccgggttcaa-tgattctcctgcctcagcctcccaaatagctggaattacaggaatgtgccaccacgcccagcttatttttgcatttttagtagaaacagtgtttctcCACGTGggtcaggcgggtctc i papAnu2.chr19 C 0 I 6 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e chlSab2.chr6 47379976 58817 + 50890351 I e macFas5.chr19 55628290 5 + 59248254 I e rheMac3.chr19 60527078 167 + 64156825 I a score=44494.000000 s hg38.chr19_GL949747v2_alt 441987 64 + 729520 ccgacctcaggtgatccgcccacctccgcttcctgaagtgccggaattacaggcgtgagccacc s panTro4.chr19 59682558 64 + 63644993 ccgaccttatgagattcgcccacctcgggctctcaaagttctaggatgacagacgtgagccacc i panTro4.chr19 I 6 I 6 s ponAbe2.chr19 56638224 64 + 60714840 ccgacctcaggagattcgcccacctcaggctctcaaagttctaggatgatagaggtgagccacc i ponAbe2.chr19 I 55727 T 55716 s nomLeu3.chr10_GL398297_2_random 2411 63 - 21488 ccgacctcaggagatttgcccacctc-ggctctcaaagatctaggatgacagatgtgagccacc i nomLeu3.chr10_GL398297_2_random I 6 I 6 s papAnu2.chr19 47717781 64 + 51301725 ccgacctcaggtgattcacccacctcaggctctcaaagtgctaggatgatagacgtgagccacc i papAnu2.chr19 I 6 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e chlSab2.chr6 47379976 58817 + 50890351 I e macFas5.chr19 55628290 5 + 59248254 I e rheMac3.chr19 60527078 167 + 64156825 I a score=1900.000000 s hg38.chr19_GL949747v2_alt 442051 4 + 729520 ------ggcc s panTro4.chr19 59682628 4 + 63644993 ------ggca i panTro4.chr19 I 6 C 0 s ponAbe2.chr19 56582572 4 + 60714840 ------ggcc i ponAbe2.chr19 T 55716 C 0 s nomLeu3.chr10_GL398297_2_random 2480 4 - 21488 ------ggcc i nomLeu3.chr10_GL398297_2_random I 6 C 0 s papAnu2.chr19 47717845 10 + 51301725 acccccagcc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e chlSab2.chr6 47379976 58817 + 50890351 I e macFas5.chr19 55628290 5 + 59248254 I e rheMac3.chr19 60527078 167 + 64156825 I a score=8700.000000 s hg38.chr19_GL949747v2_alt 442055 7 + 729520 taaaagg s panTro4.chr19 59682632 7 + 63644993 taaaagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56582576 7 + 60714840 taaaagc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 2484 7 - 21488 taaaagc i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chr19 60527245 7 + 64156825 taaaagc i rheMac3.chr19 I 167 C 0 s papAnu2.chr19 47717855 7 + 51301725 taaaagc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e chlSab2.chr6 47379976 58817 + 50890351 I e macFas5.chr19 55628290 5 + 59248254 I a score=2607522.000000 s hg38.chr19_GL949747v2_alt 442062 1692 + 729520 cattttaatgggatgagatgaaaactcatcgcga-ttgtaatttacatttctctgatgatgagtgatgccgagtactttttcatatacgtgatcgccatttctatgttttgtttgtggagaaatgtctcctcatgtcttttgctcgttttttaattaaat----tgttttattgagttgtttgagcttcttatatttccagttattaatcccgtctcagatgaatagtttgcaaatatttgctcctattttgtgggttgtctcttcactttcttggttta-tcttttgtggtgcagaagttgcttggtttgatgtaatcctaatggtctattttttgctttgattacttgtgttttgaaggttttaaacaaaatgtctttcgtcagacaaatgtc---------ttccccattattttcttctacatgtttcataggttcaggccttagactcatgtttttaatccattttcatttga-tttttgtttatggtgacaggtatagatgcagttttattcctctgcatgtagatatccagttttccccacaccatttattgaaaagactgtcctttcctgattgtgagttcttggcacctttgtcaaagtccattaaatgggc----tgggtatggtggctcacacctgcaattccagcactttgggaggccgaggcgggtggatcacctgaagccaggagttcaagaccaggctggccaacagagtgaaacctcgtctctactaaaaatacaaaaattagctgagcatggtgaccagtgcctgtaataccactactcgggtgtttgaggcaagagaattgcttgaatccaggaagtggaggttgcattgagctgagattgcacctctgcactccagcctgcatgacagagcaagattccatcacacaca---cacaaa-aaaaagccattgggtgtaaatgcatggatcatatccgtgttctccattctgttccatt-ttttatgtgcctttctttatgccaatgtcatgctgttttgcttactacagctctgtaacatatttctaagtcaggtagtgtgatgctcctgttttctctttataccttcaagTCTCAAGACAGTGGGCATCGCACACAAAAATTATGGAGAAGAGGATCCCAAGACTCCCAGGGTCCAACATTAGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCATTGAGTAGAGGACAAGCACCCTCATTTCCTCACATCTCTCCTGTCCCATGTTCTAGGAAACCCTTCAAGTAGTTGGCCTTCACCCACAGAACCAAGCTCCAAATCTGGTGAGTAAAGGA-CCCCTCTTATCTCTGCTTTTGGAAACCTGGGGAGGTggaagccttggatgcaagcgttggctcaa-acctcccagctctgtgaatgagggcctgtcttccacca--tctctgaactccagacactccaacagtgaaagggatCTAGGGCCACCAAAGGGCTCAGCGAAGTCTCTTAACCTTTAATGTCCTGCAGGTGAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAGG-AAAAATGCAGTGTTTTTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGACTTGAGAGAGGGAAGGGAAGGGAACATCTCATGAGGGTGGG-TGTTTTAGAGAAGTTCCACTTGCCAAGGAATGAATTACTGTTGGTCATGAAGC s panTro4.chr19 59682639 1673 + 63644993 cattttaatggggtgagatgaaaactcactttga-ttttaatttgcgtttctctgatgatgagtgacactgagcactttttcgtat--------gcca--------------------ggaaat-----ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttgtttgagcttcttatatttctagttattaatcccgtctcagatgcatagtttgcacatatttgctcccaatctgtgggttgtctcttcactttgttggttta-tttttagcggtgcagaagttgcttagtttgaggtaatcccaatggtctattttt-gcttggattacttgtgttttgaaggtttaaaacaaaatgtcttccttcagacaaatgtcctggagcatttccccaatattttcttctacgtgtttcacaggttcaggccttagactcacatctttaatctactttcatttga-tttttgtctgtggtgacaggtagcggtgcagtttcattcctctgcatgtagatgtccaggtttccctgcactgtttattgaaaagactgtcctttcctgattgtgagttcttggcacctttgtcaaagtccattggatgggc----tgggcatggtggctaacacctgcaacttcagcactttgggaggccaaggcgggtggatcacctgaggccaggagtacaagattagtctggccgatgtgatgaaacatcgtctccactaaaaatataaaaaatagctgagcatggtggtcagcacctgtaataccactactcaggagtttgaggcaagagaattgattgaactcaggaggctgaggttgcagtgaaccgagattgcacctctgcattccagcctgggtgacagagtgagactccatctcaaaag---aaaaaa-taaaaaaaattggatgtaaatgcatagattatatctgtgttcttcattctgctccgttgttctatgtgcctttctttatgccaacatcatgctgttttgcttactacagctctgtaacatatcttgagatcaggtagtgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGGGCGTCACATACAAAACTTATGGAAAAAAGGATCCCAGGACTCCCAGGGTCCAACATTAGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCACTGAGTAGAGGACAGACACCCTCATTTCCTCACCTCTCTCCTGTCTCATGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCGGTGAGTACAGGA-CCC-TCTTATATCCACTTTTGGAACCCTGGGAAGGTGGAAACCTTGGATTGAGGCGTTGACTCAGCATCTCACAGCTCTGACATTGTACGCCTGTCTTCTACCA--TCTCCGAACTCCAGATACTCCAACAGCGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTCATCTCTCATTTTATGGAGCTGAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAGG-AAAAATGCAATGTTTGTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGACTTGAGAGAGGGAAGGGAAGGGAACATCTGATGAGGGCGAGCTGTTTTAGAGAAGTTCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATAAAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56582583 1672 + 60714840 catcttaatggggtgagatgaaaactcacttcga-ttttcatttgcatttctctaatgatgaatgatactgagcattttttcatat--------gtgg--------------------ggaaat-----ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttgtttgag---cttatatttctagtcattaatcctgtcttagatgcatagtttgcacatatttgctcccaatccgtgggttgtctcttcactttgttggttta-tctttagcggtgcacaggttgcttagtttgatgtaatcccaatggtctattttttgctttgattacttgcgttttgaaggttttaaacaaaacgtccttcctcagacaaatgtcctggagcatttcctcaatattttcttctacgtgtttcataggttcagcccttagactcacatctttaatccattttcatttga-tttttgtgtatggtgacaggtagaggtgcagtttcattcctctgcatgtagatatccagttttccctgcactgtgtattgaaaagactgtcctttcctgattgtaagttcttggcacctttgtcaaagtccaatggatgggc----tgggcatggtggctaacacctgcaattccagcactttgggaggccgaggcaggcggatcacctgaggccagcagttcaagatcagcctggccaacatggtgaaacatcatctctactaaaaatacaaaaatcagctgagcatgatggtcagcacctgtaataccactattcaggagtttgaggcgagagaattgattgaacccaggaggcggaggtggcagtgaactgagattgcacctctgcactccagcctggatgacagagtgagactccatctcaaaag---aaaaaataaaaaaccattggacgtaaatgcatggattatatctctattattcattctgctccattgttctatgtgcctttctttatcccaacgtcatgctgttttgcttactacagctctgtaacatatttttagatcaggtagtgtgatgctcctcttttctctttACACCTTGAAGTCTCAAGACACTGGGCGTCACATATAAAAATTATGGAAAAAAGGATCCCAGGACTCCCTGGGCCCAATATTAGATAAGAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCATTGAGTAGAGGACAGACACCCTCATTTCCTCACCTCTCTCCTGTCTCGTGTCCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACTGAACCCAGCTCCAAAACCGGTGAGTACAGAA-CCC-TCTTATATCTGTTTTTGGAAACCTGGGGAGGTGGAAACCTTGGATTCAGGCATTGACTCAGCATCTCACAGCTCTGACATTGTGCGCCTGTCTTCCACCA--TCTGCAAACTCCAGATACTCCAACAGCGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTAATCTCTCATTTTATGGAACTGAGACCTCTTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAGG-AAAAATGCAATGTTTGTTCTCCCTGCATTCCTAACTGGAGAATAAATTCCTGGGGGCTTGAGAGAGGGAAGGGAAAGGAACATCTGATGAGGACGAGGTGTTTTAGAGAAGTTCCACTTGTCAAGGAATGAGCTTCTGTTGGTCATGAAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 2491 1677 - 21488 cattttaatggggtgagatgaaaactcactttga-ttttaatttgcatttctctgatgatgagtgatactgagcactttttcatat--------gcag--------------------ggaaat-----ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttctttgagcttcttatatttctagttattaatcttgtctcagatgcatagtttgcatgtatttgctcccaatctgtgggttgtctcttcactttgttggttta-tctttagcagtgcagaagttgcttagtttgatgtaaccccaatggtctattttttgctttgattacttgtgttttgaaggtttaaaacaaaatgtctttcttcagacaaatgtcctggagcatttccccaatattttcttctacatgtctcataggttcaggccttagactcacatctttaatccattttcatttgattttttgtgtatggtgacaggtagaggtgcagtttcattcctatgcatgtagatatccagttttccccgcactgtttattgaaaagactgtcctttcctgattgtaagttcttggcacctttgtcaaagtccattggatgggc----tgggcatggtggctaacacctgcaattccagcactttgggaggccgaggcgggtggatcacctgaggccaggagttcaagatcagcctggccaacatggtgaaacaccgtctctactaaaaatacaaaaattagctgagcatggtggtcagcacctgtaataccactactcgggagtttgaggcgagagaattgattgaacccaggaggctgagtttacagtgaaccgagattgcacctctgcactccagcctgggtgacagagcgagactctatctcaaaag---aaaaaataaaaaaccattagatgtaaatgcgtggattatatctgtgttattcattctgctccattgttctatgtgcctttctttatgccaatgtcatgctgttttgcttactacagctctgtaacatatttttagatcaggtagtgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGGGCATCACATATAAAAACTATGGAAAAAAGGATCCCAGGACTCCCCAGGCCCAATATTAGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCATTGAGTAGAGGACAGACACTCTCATTTCCTCACCTCTCTCCTGTCTCGTGTTCTAGGAAACCCTTCAAACAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCGGTGAGTACAGAA-CCC-TCTTATATCTGCTTTTGGAAACCTGGGGAGGTGGAAGCCTTGGATGCAGGCGTTGACTCAGCATCCCACAGCTCTGACATCGTGTGCCTGTCTTCAACCA--TCTCTGAACTCCAGATACTCCAACAGCGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTAATCTCTCATTTTATGGAGCTGAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAGGAAAAAATGCAGTGTTTGTTCTGCCTTCATTCCAAACTGGAGGATAAATTCCTGAGGGCTTGAGAGAGGGAAGAGAAGGGAACATCTGACGAGGGAGAGGTGTTTTAGAGAAGTTCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAAGC i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chr19 60527252 1704 + 64156825 cattttaatggggtgagatgaaaattcattgtga-ttttaatttgcatttctctgatgatgagtgaaactgaacactttttcacacacatgatggtcatttatatgttttgtttgtggagaaatgtctgttcaagtcttttgctcattttttagttaaat--tttactttattgagttatgtgatcttcttatatttctagttattaatcctgtctcagatgcatagtctgcaaatattggctcccattctgtgggttgtctcttcactttgttgtttgcttgttttgcagtacagaagctgcttagtttgatgtaatcccaatggtctgtttattgctttgattatttgtgtttttgaggtttcaaacaaaatgtctcttctcagacaaaggtcctgaagcacttcctcaatattttcttctacgtgtttcataggttcaggccttagactcatgtatttattccattttgatttgg-tttttgtggatgatgagacgtagagctgcagtttcattcctctgcatggagataaccagttttccccacattgtttattgaaaagactgtcctttcctgattgtagcctcctggcacctttgtcaaaatgcattggattggcagagcgggcatggtggctcacacctgcagtcccagcactttcagaggccaaggtgggtagatcacctgagacgaggagtttgaggcccgcctggccaacatagtaaaaccctgtctccactaaaagtacaaaaattagcttagcattgtggtcagtgcctgtaataccactactcaagactctgaggcaaaagaattgcttgaacccagtagacagaggttgttg-gaaccgagactgcacctctgcaatccagcctgagtaacagagcaagattccatctca-------aaaaaa-agaatgccattgaatgtagatgcatgga-tatatctgtattctgcatttcattccattgttctatgcacctttccttatgccaacgtcatgctgttttgtttactacagctctgtaacacatttttaagtcaggtaatgagatgttcctgttttCTCTCTGTACCATAAACTCTCAAGACAATGGGAAACACATACAAAAATTATGGAGAAGAGGATCCCAGGACTCCCAGAGCCCAGTGTTGGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCCTTGAGTAGAGGACAGGCACCCTCATTTCCTCACCTCTCTCCCGT-TTCTATTCTAGGAAACCCTTCACGTAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCAGTGAGTAAAGAATCCC-TCTTATCTCTGCTTTTGGAAACCTGgggaggtggaagccttggattcaagccttggctcagcacctcccagctctgac--tgtgggcctgtcttccaccatctctctgaactccagacactccaaaagcaaaagggatcttggcccagcacagggctccgtgaagtctcttcatctctaattttctgtAGCTGAGACCTCCTACAAGCTGGAAGAATGATTGCAAATCTGACATCCTTCTCAGG-AAAAATGCAGTGTTTGTTCTCCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTTGAAAGAGGGAAGGGAAGGGAACATCTAATGAGGCCAAGGTGTTTTAGAGAAGATCCACTTGCCAAAGAATGAGCTCCTGTTGGTCATGAGGC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47717862 1675 + 51301725 cattttaatgggGTGAGATGACAACTCactttga-ttttaatttgcatttttctaatgataagtgatactgagcactttttcata----------------------------tgcggGGAAAT-----TTCAGGTCTTCTGCTC-CTTTTTAATTAAATCATTTGTTTTATTGAGTTGTTTAAGCTTCTTATATTTCTAGTTATTAATCCTgtctcagatgcatagtttgcacatatttgctcccaatctgtgggttgtctcttcactttgttggttaA-TGTTTAGTGGTGCAGAAGCTgcttagtttgatgtaatcccaatggtctattttttgctttgattacttgtgtttttaaggttttaaacAAAATGTCTTTCCTCGGACAAATGTCCTGGAGCATTTCCCCAAGACTTTCTTCTACGTGTTTCATAGGTTCA-GCCTTAAACTCgcatctttaatccattttcatttga-tttttgtgtatggtgagaggtagaggtgcagtttcattcctctgcatgtagatatccagttttccctgcaCGGTTTACTAAAAAGTCTGTCCTTTCCTGATTGTaagttcttggcacctttgtcaaagtCCATcggatgggc----tgggcatggtggttcacacctgcaattccagcactttgggaggccgaggcaggtggatcacctgaggccaggagttcaagatcagcctggccaacatggtgaaacatcgtctgtactaagaatacaaaaattagctgagcatggtggtcaGCGCCTGTAATACCactactcaggagtttgaggcaaaagaattgattgaacctaggaggctgaggttgcagtgaaccgagattgcacctctgcactccagcctgggtgacagagcgagattccatctcaaaagaggaaaaaa-aaaaaaccattggaTGTAAATGCATGGATTATATCTGTGTTCTTCATTCTGctccattgttctatgtgcctTTCTTTATGccaatgccatgctgttttgcttactacaGCTCTGTAACATATTTTTAGATCAGGTAGAGTGAcgctcctgttttctttttatacctTGAACTCTCAAGACAGTGGGCATCACATACAAACATTATGGAGAAAAAGATCCCAGGATTCCCAGGGCCCAATATTAAATAACAGAGTGTTGGCCATGAACCAACCTCAAATATTTCCATTGAGTAGAGGACAGGCAGCCtcatttcctcacctctctccttTCTTGTGTTCTAGGGAACCCTTCAAATGGTTGGCCTTCACCCACTGAACCAAGTTCCAAAACTGGTGAGTACAGAA-CCC-TCTTATATCTGCTTTTGGAAACCTGGGGAGATGGAAGCCTTGGATTCAGGCGTTGACTCAGCATCTCGCAGCTCTGACATTGTGCGCCTGTCTTCCACCA--TCTCTGAACTCCAGACACTCCAACAGTGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTAATCTCTAATTTTATGGAGATGAGACCTCCTACAAGCTAGAAGAATGACTGCCAATCTGACATCCTTCTCAGG-AAAAATGCAGTGCTTGTTCTCCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTtgacagagggaagggaagggaacatcTGATGAGGGCGAGGGGTTTTAGAGAAGTTCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47438793 1697 + 50890351 cattttaatggggtgagatgaaaattcattgtgatttttcatttgtatttctctgatgatgagtgatactgaacac--tttcatatacatcatggccatttatatgttttgtttgtggagaaatatctgttcatgtcttttgctcattttttagttaaattctttgttttattgagttatgtgagcttcttatatttctagttataaatcccgtctcagatgcatagtttgcaattattggctcccattctgtgggttgtctcttcactttgttggttatttgttttgcagtgcagaagctgcttagtttgatataatccctgtggtctgttttttgctttgattacttgtgtttttgaagtattaaacaaaatgtcttttctcagacaaatgtcctgaagcatttccctaatatttccttctacaaatttcataggttcaggacttagactcatgtatttaatccatttggatttga-cttttctgaatggtaagaggtagaggtgcagtttcattcc-ctgcaaggagataacccgttttccccgcatcgtttattgaaaagactgtcctttcctgattgtaggttcttgacactttagtcaaaatgcattggattggc----tgggcatggtggctcacacctgcaatcccagcactttcagaggccaaggtgggtggatcacctgagaccaggagttcgaggcccgcctggccaacatagtaaaaccctgtctccactaaaaatgcaaaaattagctgagcatggtggtcagcgcctgtcataccactactcgagagtgtgaagcaagagaattgcttgaattcaggagacagaggttgctgtgagctgagattgcacctctacactccagcatgggggacagagcaagattccatctcaa------aaaaaa-gaaaagccattggatgtagacgcatagattatatctgtgttcttcattttactccgttgttctatgcacttttctttatgccaacgtcatgctgttttgtttactacagctctgcaacatatttttaagtcaggtaatgtgatgttcctgttttCTCTCTATATCTTAAAGTCTCGAGACATTGGGTAACACATACAAAAATTATGGAGAAGAGGATCCCAGGACTCCCAGAG-CCAGTGTTGGATAACAGAGTGTTGTGCATGAACCAACCTCAAAGATTTCCCTTGAGTAGAGGACAGGCACCCTCATTTCCTCACCTCTCTCCTGT-CTCTATTCTAGGAAACCCTTCACGTAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCAGTGAGTAAAGAATCCC-TCTTATCTCTGCTTTTGGAAACCTGGGGAGGTggaagccttggagtcaagccttggctcagcacctcccagcgctggt--tgtgggcctgtcttccaccatctctctgaactccagacact-caacagcaaaagggatCTTGGCCCAGCACAGGGCTCAGTGAAGTCTCTTAATCTCTAATTTTCTGTAGCTGAGACCTCCTACAAGCTGAAAGAATGATTGCAAATCTGACATCCTTCTCAGG-AAAAATGCAGTGC----TCTCCCTGCATTCCTAACTGGAGGATCAATTCCTGGGGGCTTGAAAGAGGGAAGGGAAGGGAACATCTAATGAGGGTGAGGTGTTTTACAAAAGTTCCACTTGCCAAGGAATGAACTCCTGTGGGTCATGAGGC i chlSab2.chr6 I 58817 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e macFas5.chr19 55628290 5 + 59248254 I a score=360277.000000 s hg38.chr19_GL949747v2_alt 443754 174 + 729520 AACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCCGTAACAGAGAACAGAGCTCA---------TGCACGC-ACACTTCGACTCACTGACTCATTCAGCCACGGCCCCATGCTCAGGCTGTGCAGT-TGGAATCCtttcctattgttgccataacaaatttccacaagattcgtgggtgaaaata s panTro4.chr19 59684312 175 + 63644993 AACCCAGGCTGACTCAGCAGAGCAAGAGCCTTGCCATAACAGAGAACAGAGCTCA---------TGCACGC-ACACTTCGACTCACTGACTCATTCAGCCACGGCCCCATGCTCAGGTTGTGCAGTGTGGAACCTtttcctattgttgccataagaaatttccacaagattcgtgggtgaaaaca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56584255 175 + 60714840 AACTCTGGCTGACTCATCAGAGCAAGAGCCTTGCCGTAACAAAGGACAGAGCTCA---------TGCATGC-ACACTTCGACTCACTGACTCATTCAGCCACGGCCCCATGCTCAGGCTGTGCAGTGTGGAACCTtttcctattgttgccataacaaatttccacaaaattcgtgggtgaaaaca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 4168 175 - 21488 AACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCCGTAACACAGAACAGAGCTCA---------TGCACGT-ACACTTCGACTCACTGACTCATTCGGCCGCGGCCCCATGTTCAGGCTGTGCAGTGTGGAACCTtttcctattgttgccataacaaatttccacaagattcatgggtgaaaaca i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chr19 60528956 182 + 64156825 AACCCTGGCTGACTCAGCAGAGCAAGAGCCTTG-AGTAACAGAGAACAGAGCTCATGCACACCTTGCACGC-ACACTTCGACTCACTGACTCATTCAGCCATGGCCCCATGCTCAGGCCGTGCAGT-TAGAATCCttttctattgttgccataacaaatttccacaaaattggtggatgaaaaca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55628295 175 + 59248254 AACCCTGGTTGACTCAGCAGAGCAAGAGACTTGCAGTCAGAGAGTATTTAGTTCATTTA-----TGCACATGACACTTCCACTCACTCACTCGTTCAGCCAATACCCCATGCTCTGGCTCTG-----TGGAAtattttcctattgttgccataacaaatttccagaagcttcttggatgaaaaca i macFas5.chr19 I 5 I 24382 s papAnu2.chr19 47719537 173 + 51301725 AACCCTGGCTGACTCAGCAGAGAAAAACCCTTG-AATAACAGAGAACAGAGCTCA---------TGCACGC-ACACTTCAACTCACTGACTCATTCAGCCATGGCCCCATGCTCAGGCTGTGCAGT-TGGAATCCTTTCCTACTGTTGCCATAACAAATTTCCACAAGATTCGTGGGTGAAAACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47440490 173 + 50890351 AACCCTGGCTGACTCAGCAGAGCAAGAGCCTTG-AGTAACAGAGAACAGAGCTCA---------TGCACGC-ACACTCCGACTCACTGACTCATTCAGCCATGGCCCCATGCTCAGGCTGTGCAGA-TAGAATCCttttctattgttgccataacaaatttccacaaaattggtggatgaaaaca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T a score=318994.000000 s hg38.chr19_GL949747v2_alt 443928 189 + 729520 aagcggctttttaattatcttacagtgctgtagctcaaagtatgaagtgcatctcactgggctaaaaacaaggtgacagcaaggctgccttccctctgagggttccaggcaagaatctgcttctcacttgtcccagcttctaaaggctccca-gttccttggctcctggtccccttcctccttcctcaaa s panTro4.chr19 59684487 189 + 63644993 aaactgttatttaattatcttacagtgctgtagctcaaagtatgaagtgcatctcaccgggctaaaatcaaggtgacagcaaggctgccttccctctgagggttccaggcaagaatctgcttctcacttgtccctgcttctaaaggctccca-gttccttggctcctgatccccttcctccttcctcaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56584430 190 + 60714840 aaacggttttttaattatcttacagtgctatagctcaaagtatgaagtgcatctcactgggttaaaatcaaggtgacagcaaggctgccttccctctgaagtttccaggcaagaatctgcttctcacttgtcccagcttctaaaggctcccatgttccttggctcccggtccccttcctcctttctcaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 4343 190 - 21488 aaacagttatttaattatcttacagtggggtagctcaaagtatgaagtgcatctcactgggctaaaatcaaggtgacagcaaggctgccttcccactgagggttccaggcgagaatctgcttctcacttgtcccagcttctaaaggctcccatgttccttggctcctggtcccattcctccttcctcaaa i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chr19 60529138 181 + 64156825 aaacggctttttaattatcttacagtgctgtagctcaaaggatgaaatgcacctcactgggctaaaatcaaggtgacagcaaggctgccttccctccgaaggttccaggcgagaatctgct---------tcccagtttctagaggctcccacgttccttggctcctggtccccttcctccttcctcaaa i rheMac3.chr19 C 0 I 4 s papAnu2.chr19 47719710 189 + 51301725 AAACGGTTTTTTAATTATCTTACAGTGCTGTAGCTCAAAGGATGAAATGCATCTTACTCGGCTAAAATC-AGGTGACAGCAAGCCTGCCTTCCTTCTGAAGGTTCCAGGCAAGAATTTGCTTCTCACTTGTCCCAGCTTCTAAAGGctcccacattccttggctcctggtgcccttcctccttcctcaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47440663 190 + 50890351 aaacggctttttaattatcttacagtgctgtagctcaaaggatgaaatgcacctcactgggctaaaatcaaggtgatagcaaggctgccttccctccgaaggtttcaggcgagaatctgctcttcacatgtcccagtttctagaggctcccacgttccttggctcctggtccccttcctccttcctcaaa i chlSab2.chr6 C 0 T 58471 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e macFas5.chr19 55628470 24382 + 59248254 I a score=982790.000000 s hg38.chr19_GL949747v2_alt 444117 824 + 729520 gcccacaaagactggtcacatctcacatggcatcactcagacccttcttcctta-ccacacctctttctctgaatgctgctctcccttcttccttatcttttgaaaacttggggattctattgggttcaccaagatgaaaatccatcataatctcccggaaatcattcaggatacccttgttttaagttcagctgactagcaaccgtaattccatctgcaatcttcattcctcctttccatgtaaaataacatattcacaagctatggaggccaggacagggacattttggggtgggacagcattctcctgccttccacGAACGGTGAACAAGATGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGCATGAAATCTA----tttgtttgttcgttcat-ttatttattgagacagagtctccctctgtcttccaggctacagtgcagtgtcacgatcttggctcactgcaacctgcgtctcctggatccaagtgattctcctgcctcaccctctcgagtagctgggattacaggcaactgccaccatgcccggctaactcttttt-gtatatttttt-gtagagaggatgtttcaccatgttggccaagcttgtctgaaactcccaacctcaagtgatccgaccatctcagcaacccaaagtactgggattacaggcgtgagccactttgcccagccAGAATTCAAAATCAATAATAGATAATGCTgagtgtataattttgggtgacagag s panTro4.chr19 59684676 824 + 63644993 acccacaaagactggtcacatctcacatggcatcactcagacccttcttcctta-ccacacctctttctctgaatgctgctctcccttcttactcatcttttgaaaacttggggattctattggtttcaccaagatgaaaatccatcataatctcccggaaatcattcaggatacccttgttttaagttcagctgattagcaaccgtaattccatctgcaatcttcattcctcctttccatgtaaagtaacatattcacaagctatggaggctaggacagggacattttggggtgcgaccgcattctcctgccttccacaAACAGTGAACAAGACGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGCCTGAAATCTA----tttgtttgtttgttctt-ttgtttattgagacagagtctccctctgtcttccaggctacagtgcagtgtcacgatcttggctcactgcagcctgcacctcctgcattcaagtgattctcctgcctcagcctctcgagtagctgggattataggcaactgccaccatgcctggctaattcatttt-gtatatttttt-gtagagaggatgtttcaccatgttggccaagcttgtctgaaactcccaacctcaagtgatccaaccgtctcagcatcccaaagtactgggattacaggcgtgagccactgtgcccagccAGAATTCAAAATCAATAATAGATAATGCTgagtgtatgattttgggtgacagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56584620 824 + 60714840 atccacaaagactggtcacatctcgcatggcatcactcagacccttcttcctta-ccacacctctttctctgaatgctgcttacacttcttcctcatcttttgaaaacttggggattctattgggttcaccaagatgaaaatccatcataatctcccagaaatcatccaggataccctggttttaagttcagctgattagcaaccgtaattccatctgcaatcttcattcctcctttccacataaaataacatattcacaagctatggaggctaggacagggacattttggggtgggacagcattctcctgccttccacaAACAGTGAACAAGATGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGCATGAAATCTA----tttgtttgtttgttcgt-ttgtttattgagacagagtctccctctgtcttccaggctacagtgcagtgtcacaatcttggctcactgcaacctgcgtctcctcgattcaagtgattctcctgcctcagcctctcgagtagctgggattacaggcaactgtcatcatgcccggctaattcttttt-gtatttttttt-gtagagaggatgtttccccatgttggccgagcttgtctgaaactcccaacctcaagtgatccaaccgtctcagcatcccaaagtactgggattacagacgtgagccactgtgcccagccAGAATTTAAAATAAATAATAGATAATGCTGAGTGTATAATTTTGGGTGACAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 4533 828 - 21488 acccacaaagactggtcacatctcacatggcatcactcagacccttcttcctta-ccacacctctttctcggaatgctgctctcccttcctcctcatcttttgaaaacttggggattctattgggttcaccaagatgaaaatccaccacaatctcccggaaatcatccaggatacccttgttttaagttcagctgattagcaaccgtaattccatctgcaatcttcattcctcctttccatgtaaaataacatattcacaagctatggaggttaggacagggacattttggggtgggacagccttctcctgccttccgcaAACAGTGAACAAGATGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGGCCAATAAATGAATGATCCATTGGGAAGCATCTGTGCACGAAATCTAtttgtttgtttgtttgtttgt-ttgtttAttgagacagagtctccctctgtcttccaggctacagtgcagtgtcacgatcttggctcactgcaacctgcacctcctggattcaagtgattctcctgcctcaccctcttgagtagctgggattacaggcaactgccaccacgcccggctaattcttttt-gtacatttttt-gtagagaggatgtttcaccatgttggccaagcttgtctgaaactcccaacctcaaatgatccaaccatctcagcatcccaaagtactgggattacaggcgtgagccactgtgcccagccAGAATTCAAAATAAATAATAGATAATGCTGAGTGTATAATTTTGGGTGACAGAG i nomLeu3.chr10_GL398297_2_random C 0 I 15601 s papAnu2.chr19 47719899 814 + 51301725 ACCCACAAAGACTggtcacatctcacatggcatTACTCAGACCCTTCTTCCTTA-CCACACTTCTTTCTCTGAATGCTGCTCtcccttcttcttcatttttggaaAACTCGGGGATTCTATTGGGTTCACCAAGATGAAAATCCATCATAATGTCCCTGAAATCATCCAGGATACCCTTGTCTTAAgttcagctgattagcaaccgtAATTCTGTCTGCAATCGTCATTCCTCCTTTCCGTGTAAAATAACGTATTCACAAGCTATGGAGGCTAGGACAGGGACATTTTGGAGTGggacagcattctcctgccttccaTAAACAGGAAACAAGATGCATTTGGCCTCTACTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCA------GAATGCACAAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGCAAGAAATCTA----TTTGCTT----GTTCGT-TTGTTTAtcaagacggagtctccctctgtcttccaggctacagtgcagtggcacgatctctgctcactgcaacctgtgcctcctggattcaagtgattctcctgcctcagcctctcgagtagctgggattacaggcaaccactaccacgcccggctaattcttttt-gtatatttttt-gtagagaggatgtttcaccatgttggccaagcttgtctgaaactcccagcctcaagtgatctgaccgtctcaggctcccaaagtactgggattgcaggtgtgagccactgtgcccagccagaatttaaaataaataatggataATGCTGAGTGTATAATTTTGGGTGACAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47382382 819 + 50890351 gcccacaaaggctggtcacgtctcacatggcatcattcagactcttcttcttcacccacacctctttctctgaatgctactctgccttcttcctcatctttag-ggactttgggattctattggggtcatcaagat---aatccatcataatctccctaaaatcatctaggataccctccttttcagttcagctgattagcaaccgtaattccatctgcaatcttcattcctccttt-catgtaaaatgacatagtcacaagccatggaggctaggacagggacattttggggtggggcagcattctcctgccttccacaAATGGTAAACAGGGTGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAAAACGAGGGCAGAAAATGAATGCACAAGTGGATCCACAAATGAATGATCCATTGGGAAGCATCTGTGCACCAAATCTG----tttttttg---gtttgtgttttgttttgaggtagagtctcactctgtcccacaggctggagtgcagtgacacaatctcaactcactgcaacctctgcctcctgggttcatgcaattcttctgcctcagcctaccgagtagctgggattacagccgcgcaccaccacactcggctaattttttttggtatattttttagtagagatgaggtttcaccgtgttgtgc-agtctgtctcaaactcccaatctcgagtaatctgaccgccttggcctccctaagtgcaaggattataggcgtgagccactgtgcccagtcAGGATTTAAAATAAATAATAGATAATGCTgagtgtataatttcaggtgacagag i chlSab2.chr6 T 58471 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e macFas5.chr19 55628470 24382 + 59248254 I e rheMac3.chr19 60529319 4 + 64156825 I a score=164598.000000 s hg38.chr19_GL949747v2_alt 444941 149 + 729520 aaggtctcactaatcag---atatttgtgacattaatgaaaaacacggattgaacccctgaaagattggcggaaggattttccacaca--gctgtcagctgtgaaggcacaaaggtgaaaacaatctgatgttgaaggaagaggctctgc-ctca s panTro4.chr19 59685500 151 + 63644993 aaggtctcactaatcag---atatttgtgacattaatgaaaaacacgaattgaacccctgaaagattggcggaaggattttccacacacagctgtcagctgtgaaggcagaaagctgaaaacaatctgatgttgaaggaagaggctctgc-ctga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56585444 152 + 60714840 AAAGTCTCACTAATCAG---ATATTTGTGACATTAATCAAAAACATGGATTGAACACCTGAAAGATTGGCAGAAGGATTTTCCACACACAGCTGTCAGCTGTGAAGGCACAAAAGTGAAAACAATCTGATGTTGAAGGAAGAGGTTCTACATTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 20962 149 - 21488 AGGGTCTCACTAATCAC---ATATTTGTGATGTTAATGAAAAAAATGGATTCAACCCATGGAAGACTGGTGGAAGGATTTTCCACACA--ACTGTCAGCCGTGAAGGCACAAAGGTGAAAACAATCTGATGTTGAAGGAAGAGGCTCTGC-CTGA i nomLeu3.chr10_GL398297_2_random I 15601 T 15750 s papAnu2.chr19 47720713 151 + 51301725 AAGGTCTCACTAATCGG---ATATTTGtgacattaatgaaaaaaatggatTGAATCCCTGAAAGACTGGCGGAAGGATTTTCCACACACAGCTGTCAGCCTTGAAGGCACAAAGGTGAAAACAATCTTATGTGGAAGGAAGAGGCTCTGC-CTGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47383201 154 + 50890351 aaggtctcactgatcagataatatttgtgaccttaatgaaaaaaatggattcaacccttggaagattggcagaaagattttccacactgagccctcagccgtgaaggcaaaaaggtggaaacattcttatgttcaaggaagagGCTCTGC-CCAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e macFas5.chr19 55628470 24382 + 59248254 I e rheMac3.chr19 60529319 4 + 64156825 I a score=706328.000000 s hg38.chr19_GL949747v2_alt 445090 643 + 729520 aatgctgggaatgaagtggggagaatgacaagacgactgtagagagacggagagcACACTGGGTACACAGGAAACTAAGGAGCAACAAGGAGTGTGTGTTTGACACTCACAGCCATTGGATTCACCTCGGGG-TAACCAGGAATCCCTACATGATTAATA-TGACTGACATGAAAATAAAGGAGGCCCAGGTGCGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTGCCACCCCACTGGTGAAATGTGGTGCTGATTTAGACCCTAAGTGGATGAAGCAGATGGATATAAGCTATGCTTGGGAGGTAGAATCATTTGCAGGGAGGGCTTGCTGGGTTTGA-GTTTCCTAGTTGTTTAATCCTTGCTAAATTAATTTCTTTCTGAGATTTA--TTCCTCCTACACATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGGGACCT---ATTATAGCATAGTATACAAGTCTGTGAAcggtggctcactcctgtaacccagcactgcaggaggctaaggccagtggattccaagaaatcaggagttcgagaccagcctggccaacatggtgaaaccctatctctacatggtgaaaccctatctctcctaaaaatacaaaaattagcc s panTro4.chr19 59685651 623 + 63644993 aatgctgggaatgagatggggagaatgacaagacgactgtagggagacagagagcACATTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTGACACTCGCAGCCATTGGATTCACCTCGGGG-TAACCAGGAATCCCTACATGATTAACAGTGACTGACATGAAAATAAGGGAGGCCCAGGCGCGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGATTTTGACACTAAGTGGATGAAGCAGATGGATATTAGCTATGCTTGTGAGGTAGAATCATTGGCTGGAAAGGCTTGCTGGGTTTGA-TTTTCCTAGATGTTTAATCCTCACTTAATTAATTTCTTTCTGAGATTTA--TTCATCCTACACATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGAGACCT---ACTATAGCATAATATACAAGTCTGTGAAcggtggctcatgcttgtaacccagcactgcaggaggccaaggcgggtggattccatgaagtcaggagttccggaccagcctggccaacatggtgaaaccctatctctac---------------------taaaaatgcaaaaattagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56585596 623 + 60714840 AATGCTGGGAATGAGATGGGGAGAATGACAAGACGACTGTAGAGAGATGGAGAGCACACTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTGATACTCACAGCCATTGGATTCAACTCAGGG-TAACCAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCGTAACTGGAATCTAGGAGACTGTGCAAAAGGCAATTCCTGCCCCACTGGTGAAATGTGGTGCTGATTTAGACACTAAGTGGATGAAGCAGATGGATATAAGATATATTTGTGAGGTAGAATCATTTGCAGGGAGGGCTTGCAGGGTTTGA-TTTTCCTCGTTGTTTAATCCTCAGTAAATTAATTTCTTTCTGAGATTTA--TTCCTCCTACAGGTAAATCAATACCTGGCAAAGGAGTGACGGATATATGAGGGGTGGTGGAGATGAAGGGACCT---ATTATAGCATAATATACAAGTCTGTGAAcggtggctcactcctgtaacccagcactgcaggaggccaaggcgggtggattccatgaagtcaggagttcgagaccagcctggccaacatggggaaaccctatctctac---------------------taaaaacacaaaaattagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 5361 621 - 21488 AATGCTGGGAATGAGATGGGGAGAATGGCAAGTCGACTGTAGAGAGACGGAGAGCACACTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTTATACT--CAGACATTGGATTCACCTCGGGG-TAACTAGGAATCCCTACATGATTAATAGCGACTGACATGAAAATAAGGGAGGCCCAGGTATGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGATTTCGACACCAAGTGGATGAAGTAGATGGATATAAGATATGTTTGTGAGGTAGAATCATTGGCTGGAAAGGCTTACTGGGTTTGA-TTTTCCTAGTTGTTTAATCCTTGCTTCATTAATTTCTTTCTGAGATTTA--TTCATCCTACACATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTAGAAATGAAGGGACCT---ATTATAGCATAATATACAAGTCTGTGAAcggtggctcgctcccgtaacccagcactgcaggaggccaaggctggtggattccatgaagtcaggagttcgagaccagcctggccaacatggggaaaccctatctctac---------------------taaaaatacaaaaattagcc i nomLeu3.chr10_GL398297_2_random T 15750 C 0 s papAnu2.chr19 47720864 623 + 51301725 AACGCTGGGAATGGGATGGGGAGAATTACAAGACcactggagagaga-ggagagcacACTGGGCACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTTATACTCACAGCCATTGGATTCACCTCAGGG-TAACTAGGAATCCCTACATGATTAATAGTGACTGACATGAACATAAGGGAGGCCCAGGTGTGTAACTGGAATCTAGGAGACCGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGATTTAGACACTAAATGAATGAAGGACATGGATACAGGATATGTTTGTGAGGTAGAATCATTTGCAGGGAGGACTCACTGGGTTTGA-TTTTCCTAGTTGTTTAATCCTTGCTTAATTAAATTCTTTCTGAGATTTA--TTCCTCCTACACATAAATCAATACCTGGCAGAGGAGTGACAGATAGATGAGGGGTGGTGGAAATGAAGGGACCTA--ATTACAACATAATATACAAGGCTGTGAACGGTTGCTCATGCCTCTAACCCAGCActgcaggaggccaaggcaggtggattccatgaagtcaggagttcaagaccagcctggccaacatggtgaaaccctatctctaa---------------------taaaaatacaaatattagct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47383355 627 + 50890351 AATGCTGGGAATGAGATGGCGAGAATTACAAGACCACTGGAGAGAAA-GAAGAGCACACTGGGCACACAGGAAACTAAGAAGGAACAAGGAGTATGTGTTTTATACTCGCCGCCCTTGGATTCAACTCAGGGCTAACTAGGAATCCCTAAGTGATTAATAGTGACTGATGTGAAAATAAGGGGGGCCCCGGTGCGTAACTGGAATCTAGAAGATTGTCGAAAAGGCAATTCACATCCCACTGGTGAAATGTAGAGTTGATTTACACACTAAATGAATGAAAG--ATGGATATAAGATGTGTTTGTGAGGTAGAATCATTTGCAGGGAGGTCTTGCTGGGTTTGATTTTTCCTAGTAGTTTAATCCTTGTTTCATTAATTTCTTTCTGAGATGTACTTTTTTTCTACATCTAAATCAATACCTGGCAGAGGAGCAATGGACACACGAGAGGTGGTGTAAATGAAAGGACCTAGTATAATAACATAATATGTGAGACTGTgcatgggggctcacacctgtaacccaacacttttggatgccaaggcgggtgcatcccttgagggtaggagcttgagaccagcctggccaacatggtgaaaccccgtgtgtac---------------------taaaaatacaaaaattagcc i chlSab2.chr6 C 0 I 37 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e macFas5.chr19 55628470 24382 + 59248254 I e rheMac3.chr19 60529319 4 + 64156825 I a score=34968.000000 s hg38.chr19_GL949747v2_alt 445733 40 + 729520 gagcatggtggtgcatccctgtgatcccagctcctgctct s panTro4.chr19 59686274 40 + 63644993 gagcatggtggtgcatccctgtaaccccagctcctattct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56586219 40 + 60714840 gagcatggtgatgcatccctgtaatcccagctcctactct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 5982 40 - 21488 gagcatggtggtgcatccctgtaatcccagctcctactct i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47721487 40 + 51301725 gagcatggtggtgcatgcctgtaatcccagctcctactct i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e chlSab2.chr6 47383982 37 + 50890351 I e macFas5.chr19 55628470 24382 + 59248254 I e rheMac3.chr19 60529319 4 + 64156825 I a score=1953089.000000 s hg38.chr19_GL949747v2_alt 445773 1707 + 729520 ggaggatgaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtggagatcgcatcactgcactccagcctgggtgacacaaggagactccgtctcaaaaaataaaaataagaaaTGCATAAATATAATAAAACACACACGAACGACAAAGGCACCTGAATTCCCATCATCATTTTTCTATTTCTCTATA-ATTACTTCTTTGATTCTTTATCTTATCCATTAGACAATCAGCCTAAAACCTCTTCCGTATTTGGCTTTCTGTGAGCATGAGATCATATAGAAAATGTGAAAGCCCGCTGAATCCTCCAGCACAAATCCTGGAATAGAGAAAGTGCTCTGGTCATCACAAA-AAAAACTTGCCCCCTCACCCAAATCCCCCACCTCACCCCTACTTCCAATCACCTGTGCAGATACAGATAGACCATGGGGAGGTAAATGCTAATACTCCTTGGAGTGAGTCCAGATCTTGGAATCAGAGATCAGTGCCAGCACTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTATTGAAGCAATAGATAGTCGAGGGGGTGGTCCTTCCCCCAGCCTGTCAGGTAGAACAGCAGCCTAACATGTGTCTCCCGAGATCACAAAGAATAGCACATTTCACACGGGCTTCAACACTATTTTCTGGCTGTTTGACATAAGAGAATTCTACTTCG-CATTTTT-GATCTTGATTTCACTTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTAACTCAAGAATGCCGTGGATGTAGAAATCCTAAAGCACATTCGCTGTGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGGactgcacctgggcctatgccaattcctatcactcaccgtcactccagggagacagaacacacagagaacacattacacaggcaggttcattactaacagataagcagcgagtgacaacagaagcctacatttcaatgtgagccagttccccaaggctcagaaaagctgctcgagacatgtgga-gtcaccccatttgcagtgtagctggggg-aagccagaaagcagcccaacctgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatcacgtcctcctccaggaagaacaggaagacagcccaggctgttctgggactttcctcctgatctcaggacgttgctgtcttagtccatttttg---------------------------ttgctct--------------------------------------------------aaaggaacacttgagcctgggtaacttctaaacaaaagattttggtttgccttacagttccgcaggctgtactggaagcatggcaccagcatctatttcttgtgactgcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgcagagaccacagagatcacacggcaagagagggagcaagggagagggggagtgatggagcttccaagctcttatgaacaaccagctctccaggaactaatagagggagaacttgctaaccccgtctccttaaaacagcattgatctgttcatgatgtatccacccccatgactcaaacacctcccaagaggcccaccctcccacactggggggtaaatttcaatctgaggtttgaaggggtcaaacatctcaactaaagtagtggtatcctcagcacgttctatggttactatgagagctataactgagaa s panTro4.chr19 59686314 1705 + 63644993 ggaggatgaagcaggagaatgacttcaacccaggaagtggaggttgcagtgagtggagtttgcatcactgcactccagcctgggtgacacaaggagactccatctcaaaaaataaaaataagaaaTGCATAAATATAATAAAACACACACGAATGACAAAGGCACCTGAATTCCCATCATCATTTTTCTATTTCTCTATA-ATTACTTCTTTGATCCTTTATCTTATCCATTAGGCTATCAGCCTAAAACCTCTTCCCTATTTGGCTTTCTGTGAGCATGAGATCACATAGAAAATGTGAAAGCCCGCTGAATCCTCCAGCACAGATCCTGGAATAGAGAAAGTGCTCTGGTCATTGCAAACAAAAACTTGCCCACTCACCCAAATCCCCCACCTCACCCCTAATTCCAATCACCTGTGGATATTCAGATAGGCCATGGGGAGGTAAAC---AATACTCCTTGGTGTGAGTCCAGATCTTGGAATCAGAGATCAGCGCCAGCACTAACTCCTGCTCCCCTTCCCTACTAATTCACAGGAGGACAGGTGGTATTGAAGCAATAGATGGCCGAGGGGGTGGTCCTTCCCCCAGCCTCTCGGGTAGAACAGCAGCCTAACATGTGTCTCCCAAGATCACAAAGAGTAGCACGTTGCACACGGGCTTCAACACTATTTCCTGGACGTTTGACATAAGAGAATTCTACTTCG-CTTTTTTTAATCTTGATGTCACTTTTGTTTCCTTTTCTTGGAGAATACAAGTTGTTTGACTCAAGAAAGCTGTGGATGTAGAAATCCTAAAGCACATTCGCTGTGTATCAATCCCAGTGCAGCTTTCCCAGAGAAGACTCTAAACACCTCCTGGACTGCACCTGGGCCTATGCCAATTCCTGTCACTCACCGTCACTC-AGGgagacagaacacacagagaacacattacacaggcaggttcattactaacagataagcagcgagtgacaacagaaacctacatttcaatgtgagccagt-cctcaaggctcagaaaagctgctcgggacatatggaagtcatcccatttgcagtgtagctggggggaagccagaaagcagcccagcctgggttttgtaccctggagccacaggaagccctcagctaaagcactgcatgacgtcctcctccaggaagaacaggaagacagcccaggctgttctgagacattcctcctgatctcaggacgttgctgtcttagtccatttttg---------------------------ttgctct--------------------------------------------------aaaggaacacttgagcctgggtaacttctaaagaaaagagattgctttgcctcaccgttctgcaggctgtactggaagcacggcaccagcagctatttcttgtgatggcctcaggctgctcccattctgacagaagggaaggagggtctgtctgtgcagagaccacagagattacacatcaagagagggagcaaggg-gagggggagcaatggagcttccaagctctttttaacaaccaggtctccaggaaataatagagggggaacttgctaaccccgtctccttgggacagcattgatctgttcatgatggatccacctccatgacccaaacacctctcaagaggcccaacctcccacactgggggtgaaatttcaatgtgaggtttgaaggggtcaaacatctcaactaaagtagtagtatcctcagcacgttctatggttactatgagagctataactgagaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56586259 1702 + 60714840 ggaggatgaagcaggagaatgacttcaacccaggagctggaggttgcagtgagtcgagatcgtatcactgcattccagcctggg-gacacaaggagactctgtctcaaaaactaaaaataagaaaTTCTTAAATATAATAAAACACACACGAATGACAAAGGCACCTGAATTCCAATCATCATTTTTCTATTTCTCTCTA-ATCACTTCTTTGATCCTTTATCTTATCCATTAGGCAATCAGCCTAAAACCTCTTCCCTATTTGGCTTTCTGTGAGCATGATATCATATAGAAAATGTGAAAGCCCGCTGAATCCTCCAGCACAGATCCTGGAATAGAGAAAGTGCTCTGTTCATGGCAAA-AAAAACTTGCCCCCTCACCCAAATCCCCCACCTCAGCCCTACTTCCAATCACCTGTGGAGATTCAGATAGACCATGGGGAGGTAAACATTAATACTCCTTGGAGTGAGTCCAGATCTTGAAATCAGAGATCAGCGCCAGCACTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTATTGAAGCAGTAGATGGTCGAGGGGGCGGTCCTTCCCCCAGCCTCTCGGGTAGAACAGCAGCCTAACATGTGTCTCCTGAGATCATAAAGAGTAGCACGTTTCACATGGGCTTCAACACTATATCCTGGCTGTTTGACATAAGAGAATTCTACTTTG-CTATTTT-TATCTTGATTTCACTTTTGTTTCCTTTTCTTGGAGAATGGAAGTTGTTTGACTCAAGAATGCTGTAGATGTAGAAATCCTAAAGCACATTTGCTGTGTATGAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCTTGTACTGCGCCTGGGCCTATGCCAATTCCTATCACTCACCGTCACTCAAGGgagacagaacacacagagaatacattacataggcaggttcattactaacagataagcagcgagtgacaagagaagcctacatttcaatgtgagccagtccctcaaggctcagaaaagctgctcgggacatatgga-gtcacccgatttgcagtgtagctgggag-aagccagaaagcagcccagcctgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacgtcctcctctaggaagaacaggaagacagccca-gctgttctgggacattcctcctcatctcaggacgttgctgtcttagtccatttttg---------------------------ttgctat--------------------------------------------------aaaggaacacttgagcctgggtaacttctaaagaaaagagatttgtttggctcacagttctgcaggctgcactggaagcatggcaccagcatctatttcttgtgacggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgc--agaccacagagatca-acggcaagagagggagtaagggggagggggagcgatggagcttccaagctctttttaacaaccagctctccaggaactaatagagggggaacttgctaaccccctctccctggaacagcattgatctcttcatgatggatccacctccatgacccaaacacctcccaataggcccaacctcccacactgggggttaaatttcaatgtgaggtttgaaggggtcaaacatctaaactaaagtagttgtagcctcagcacgttctatggttactatgagagctataactgagaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 6022 1779 - 21488 ggaggatgaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtcgagatcgcatcactgaactccagcctgggtgacacaaggagactccatctcaaaaaataaaaaaaagaaaTGCATAAATATAACATAACACACACGAATGATGCAGGCACCTGAATTCCAATCATCA-TTTTCTATTTCTCTATA-ATTACTTCTTTGATCCTTTATCTTATCCATTAGGCAATCAGCCTAAAACCTCTTCCCTATTTGGCTTTCTGTGAACATGAGATCATGTGGAAAATATGAAAGCCCAGTGAACCCACCGGCACAGGTCCTGGTATAGAGAACGTGCTCTGTTCATGGCA---TAAAACTTGCCCCCTCACCCAAATCCCCCACCTCACCTCTACTTCCAATCACCTGTGGATATTCAGATAGACCATGGGGAGGTAAACACTAATACTCCTTGGAGTGAGTTCAGATGTTGGAATCAGAGATCAGCGCCAGCACTAGCCCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGATGGTATGGAAGCAACAGATGGTCGAGGGGGTGGTCCTTCCCCCAGCCTCTCGGGTGGAACAGCAGCCTCACATGTGTCTCCCGAGATCACAAAGAGTAGCACGTTTCACACCGCCTTCAACACTATTTCCTGGCTGTCTGACATAAGAGAATTCTACTTCG-CTTCTTT-TATCTTGATTTCACTTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTGACTCAAGAATTCTGTGGATGTAGAAACTGTAAAGCACATTCGCTGTGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTaaacacctcctgtactgcacccggggctatgccaattcctatcactcaccgtcactccagggagacagaacacacagggaatacattaaatagacagattcattactaacagataagcagc-agtgacaacagaagcctac-tttcactgtgagccagtctctcaaggctcagaaaagctgctcgggatatatgga-gtcaccccatttgcagtgtagctggaag-aagccagaaagcagcccagcatgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacatcctcctctaggaagaataggaagacagcccaggctgttctgggacattcctcctgatctcaggacattgctgtcttagtccattttTgggaggcggagcttgcagtgagccctgattgcgccactgcactccagcctgggcgacagagcaagactccgtctcaaaaaaaaaaaaaagaaCacttgagcctgggtaacttctaaagaaaagagatctgtttgcctcacagttctgcaggctgtactggaagcatggcaccagcatctatttcctgtgacggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgcagagaccacagagatcacagggcaagagagggagcaagggggagggggagcagtggagcttccaagctctttataacaaccagctctccaggaactaatagagggggaacttgctaaccccgtctccttgggacagcattgatctgttcatgatggattcactgccatgacccaaacacctcccaagaggcccaacctcccacaatgggggttaaatttcaatgtgaggtttgaaggggtcaaacatctaaactaaagtaGTTGTATCCTCAGCACTTCCTATGGTTACTATGAGAGCTATAACTGAGAA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47721527 1699 + 51301725 ggaggaggaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtcgagatcacatcactgcactccaacctgggtgactcaaggagactccgtctcaaagaataaaaataagacatgCATAAATATAATGTAACACACATGAATGACAATGGCACCTGGATTACCAtcatcatttttctatttctctata-atTACTTCTTTGATCCTTTATCTTATCTATTAGGCAATCAGCCTAAAACCTCTTCCCCATTT-GCTTTCTGTGAGCTTGAGATcatatagaaaatatgaaagcTCCCTGAAGCCACCAGCACAGGTCCTGGAATAGAGGAAGTGCTCTGCTCATCGCA---AAATGCTGGCCCCCTCACCCAAATCCCCCACCTCACCCCTACTTCCAATCACCTGTGGAGATTCAGATAGACCATGGGGAGGTAAACACTAATACTACTTGCAGTGAGTTCAGATCTTGGAATCAGAGATCAGCATCAGCACTAGCTCCTGGTCCCCTTTCCTACTAATCCACGGAAGGACAGGTTGTATTGAAGCAATAGATGGTGGAGGGCATTGTCCTTCCCCCAGCCTCTCGTGTAGAACAGCAACCTAAAATATGACTCCCAAGATCAC-AAAAGTAGCACGTTTCCAACGGGCTTCAACGCTATTTCCTGGCTGTTTGACGTAAGAGAATTCTGCTTCG-CGTTTTT-GATCttgatttcacttttctttccttttcttggagAATGTAATT-GTTTGAGTCAGGAGTGCTGTGCATGTAGAAATCCTAAAGCACATTCACTGTGCATGAATCCCAGTTCAGTCTTTCCAGAGAAGACTCTTAACACCTCCTGTACTGCACCTGGGGCTATGCCAATTCCTATCACTCACCGTCACTCCAGGGAGACAGAACACACAGAGAATACGTGACATGAGCAGGTTCATTACTAACACAAAAGCAGCAAGTGACAACTGAAGTGTATATTTCAATGTGAGCCAGTCCCTCAAGGCTCAGAAAAGCTGCTCAGGACATATAGA-ATCACCCCATATGCAGTGTATCTGGGGG-AACCCGAAAATCAGCCCAGCCTGGGTTTTGTACCCTGGAGCCACAGGAAGCACTGAGCTAAAGCACTGCATGACGTCCTCCTCTGGGAAGAACAGGAAGACAGCCCA-GCTGTTCTGGGACGTTTCTCCTGATCTCACGATGctaatgtcttagtccatttttg---------------------------ttgctat--------------------------------------------------aaaagaacacTTGAGCCTGGGTAACTTCTCAAGATAAGCGATTTATTTgcctcacaattctgcaggctgtactagaagcatggcaccagcatctatTTCTTGTAATGACCTCAGGCTGCTCCCACTCtggcagaagggaaggagggtCTGTGTGTGCAGAGACCACAGAGATCACACGGCAGGAGAGGGAGCAAGGGGAAGGGGCA-CAATGGAGTTTCCAAGCTCTGTTTAAAAACCAGCTCTCCAGGAACTAATAGAGGGAGAACTTGCTAACCCCGTCGTA-TGGGacggcattaatctattcatgatggatccacctccatgacccaaatacGTCCCAATAGCCCCAACCTCCCACATTGGCGGTTAAATTTCAATGTGCTGTTTGAAGGGGTCAAACATCTAAACTAAAGCAGTTGTATCTTCAGCACATTCTATGGTTACTATGAGAGCTATAACTGAGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47384019 1705 + 50890351 ggaggctgaagcaggagaatggcttcaaccctggaggcagaggtttcagtgagctgagatggcgccactgcactccagcctgggcaacacagggggactc--tctcaaaaaataaaaataaaaaaTACGTAAGTATGATATAACACACACAAATTACAAAGGCACCTGAATACCAACCATCATTTTTCTACTTCTCTGTCTTTTAATTCTTTGACCCTTTATCTTATCCATTAAACAATCAGGCTAAAACCTCTTTCTTATTTGGCTTTCTGTGAGCTTGAGATCATACGGAAAATGTGGAAGCCCCTTGAACCCACCAACGCAGGCTCTGGAATAGAGAATGTGCTCTGTTCATGGTA---TAAAACTTGCCCTGTCACCCAAATCCCCCACCTCACTCCTACTTCCAATCACCTGTGGAGATACAGATAGATCATGGGGAGATAAAAACCAATACTCTTTGGAGTGAGCTCAGATCTTGGACTCAGAGACCAGTGCTAGCACTATCTCCTGATCACATTTCGTACTAACTCACAGAAGAACAGGGTGTATTGAAACAATAGATGATGGAGGTGGTTGTGCTTCCCCCGGACTCTTAGGTAGAACAACAGCTTAATATGTGTCTCGGGAGATCACAAAAAGTAGCACGTTGCTCCTGGGCTGCATCATTATTTCATGGTTGTTTGATTTAAGTCAGGTTTACTTCACCTTTTTT-GATCTTGATTTCACTCTTTATTTCTTTTCTTGGAGAATGTAATTCTTTTGAGTCAAGAGGGTTGTGGCTGTAGAAATTGTAAAGCACATTCACTGTGCATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTaaacacctcctgtactgcacctggggctatgccagtttctgtcactcaccatcatttcagggagacagaacacacagagaatacatgacataggcaggttcattactaacagataaccagcaagtgacaacagaagcctatatttctatgtgagccagtcccccaaggctcagaaaagctgcttgggacatatgga-gtcaccccatttgcagtgcagctggggg-aacccacaaagcagcccggcctgggttttgtaccctggagccacaggaaacactgagctaaagcactgcatgacgtcctcctctaggaagaataggaagacagcccaggctgttctgggacgttcctcctgatctcaggatgttgccgtcttagtccctttttg---------------------------aggctat--------------------------------------------------aaaagaacacttgagcctgggtaacttctaaagaaacgagatttgtttgcctcacagttctgcaggctgtactggaagcacggaaccagcatctatttcttgtgatggcctcaggctgctcccattctggcagaaaggaaggggggtctgtgtgtgcagagaccacagagatcacacggcaagagagggagcaagggggagggggagcaatggagcttccaagctctttttaacaaccagctctccaggaactgatagagggagaacttgctaaccctgtctccttgggacagcattgatctattcacgatggatccacctccatgaccccaacacctcccaagaggcccaacctcccacactgggggttaaatttcaatgtgaggtttcaaggggtcaaacatctaaactaaagcagtggtatcctcagcacgttctatggttactatgagagctataactgagag i chlSab2.chr6 I 37 I 55133 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e macFas5.chr19 55628470 24382 + 59248254 I e rheMac3.chr19 60529319 4 + 64156825 I a score=1787483.000000 s hg38.chr19_GL949747v2_alt 447480 1078 + 729520 agcaggaggaagctgggtctcccgccatctgggtgcttgtcctAAAGAGACGCTGTATGTGGTTACCTGTGAATCAAGAAATGCAAGACAATTCATAAAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCCTCTTCTTCCAGGTAACCTCAGACACCTGCACATTCTGATTGGGACCTCAGTGGTCAAAATCCCTTTCACCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAAAAGTAAGTCTCACGAAGCAGAGGCCAGAGAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCACACGGGTGTGTGTTCCTCACCAGCAGGATGGTCCCTGGCCCAAGACAGGAGCCACAGAGGCAGGACTTTCTAGAGAGAGCACCAGATTCCCTTCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTATCCTCACGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGATAGAATCAATGGAATGGGACCTCAGAGCTATTCATGGGATGGGTCCTTGAACTCAGAGAGATAGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGCACCTATGGCCTCCCCCTGTTTGTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGCCCTCCGAGCTCTTTTGTTGACTTCCGTCTTCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGAACAGAA--GTGAACAGCGAGGTAGGTGCTCCTCGGCCCAGCCTCGTGGCT--AGTGTTATTCCCAAAGAGTCCTGAAAAATGTGAGCACCCTCCCTCACTCAGCATTTCCCTCTCTCCAGGATTCTGATGAACAAGACCATCAGGAGGTGTCATACGCATAATTGGAACACTGTGTTTTCACACAGAGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAGCATGTACATAGAACTTCCAAATGCTGAGCCCAGATCCAAAGTTGTCTTCTGTCCACGAGCACCACAGTCAGGCCTTGAGGGGATCTTCTAGGGAG s panTro4.chr19 59688019 1079 + 63644993 agcaggagaaagctgggtcTCCCTCCATCTGGGTGCTTGTCCTAAAGGGGTGTTGCATGTGGTTACCTGTCAATCAAGAAATGTGAGACAATTCATAAAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCCTCTTCTTCCAGGTAACTCCAGACACCTGCACGTTCTGATTGGGACCTCAGTGGtcatcatcctcttcatcctcctcctcttctttctccttcATCGCTGGTGCTCCAACAAAAAAA-GTAAGTCTCACGAAGCAGAGGCCAGAAAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAACACTCAGGTGTGTGTTCCTCACAGGTAGGATGGTCCCTGGCCCAAGGCAGGAGCCACAGAGGCAGGACTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATCCTCACGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTGAGCTCAGAGAGATAGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGCACCTATGGTCTCCCCCTGTATGTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGCCCTCCGAGCTGTTTTGTTGACTTCTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGAACAGAACAGTGAACAGGGAGGTAGGTGCTCCTCGGCCCAGCCTCGTGGCT--AGTGTTATTCCCAAAGAGTCCTGGAAAACGTGAGCACCCTCCCTCACTCAGCATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATATGCACAGTTGAATCACTGCGTTTTCACACAGAGAAAAATCACTCGCCTTTCTCAGAGGCCCAAGACACCCCCAACAGACACCAGCGTGTACACGGAACTTCCAAATGCTGAGCCCAGATCCAAAGTTGTCTCCTGCCCATGAGCACCACAGTCAGGCCTTGATGGGGTCCTCTAGGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56587961 1079 + 60714840 agtgggagaaagctaggtttcccgccatctgggtgcttgtcctAAAGAGACATTGTATGTGGTTACCTGTCAATCGAGATATGCGAGACAATTCATAAAGAGGAACTGCTATGATTACCTTCTTATTGGTGTCTCGTCTTCTTCCAGGTAACCCCAGACACCTGCACGTTCTGATTGGGACCTCAGTAGTCATCATCCCCTTCGCCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAAA-GTAAGTCTCACGAAGCAGAGACCAGAGAGCTCAGGGCCACGTGGGGAAGCAGGATGGGTGCACGCAGGTGTGTGTTCCTCACCGGCAGGATAGTCCCTGGCCCAAAGCAGGAGCCTCAGAAGCAAGACTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTATCCTCATGTCCCTTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAGTCAATGGGATGGGAACTCAGAGCTATTCATGGAATGGGTCCTTGAGCTCAGAGTGAGAGAATGTCTGTGTCT-GCTGTTGGCAACTGAGGGACCTCGGGCACCTATGGCCTCCCCCTGCATGTTGCTATCTGCTTATGAAATGAGGATCCACAAGTGCCCTCTGAGCTGTTTTGACGACTACTGTCTTCTACAGATGCTGTTGTAATGGATCAAGAGCCTGCAGGGAACAGAACAGTGAACAGAGAGGTAGGTGCTCCTTGGCCCAGCCTCGTGGCT--AGTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGCACCCTCCCTCACTCAGCATTTCCCTCTCTCCAGGATTCTGATGAACAAGATCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTTTCACACAAAGAAAAATCACTTGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCATCGTGTACACGGAACTTCCAAATGCTGAGCCCTGATCCAAAGTTTTCTCCCGCCCATGAGCACCACAGTCAGGCCTTGAAGGGGTCTTCTAGGGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 7801 1078 - 21488 AGCAGGAGAAAGCTGGGTCTCCCACCATCTGGGTGCTTGTCCTAAAGAGACACTGTATGTGGTTACCTGTCAATCAAGAAATGCGAGACAATTCATAAAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCATCTTCTTCCAGGTAACCCCAGACACCTGCACGTTCTGATTGGGACCTCAATGGTCATCATCCCCTTCGCCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAGA-GTAAGTCTCACGCAGCAGAGGCCAGACAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCACGCAGATGTGTGTTCCTCACTGGCAGGAAGGTCTCTGGCCCAAGGAAGGAGC--CAGAGGCAGGGCTTTGTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTACCCTCACGTCCCCTGCAGCCACTCACATCCAAGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTGAGCTCAGAGAGATAGAATGTCTGAGTCA-GCTGCTGGCAACTGAGGGACCTCAGGCACCTACGGCCTCCCCC-GTATGTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGCCCTCTGAGCTGTCTTGATGACTTCTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCGGGGGACAGAACAGTGAACAGGGAGGTAGGTGCCCCTCAGCCCAGCCTCATGGATACAGTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGCACCCTCCCTCACTCAGCATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATATGCACAGTTGGATCACTGCGTTTTCACACAGAGAAGAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCATCATGTACACGGAGCTTCCAGATGCTGAGCCCAGATCCAAAGTTGTCTCCTGCCCACGAGCAGCACAGTCAGGCCTTGAGGGGGTCCTCTAGGGAG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chr19 60529323 1077 + 64156825 agcaggagaaAGCTGGGTCTCCCGACATCAGGCCGCTTGTCCTAAGGAGACATTCCACATCGTTACCTGTCAATCAAGAAACGAGAGACAATCCATAACAAGGAACTGCTATGATTAGCTTCTTATTGGAGTCTTTTCTTCCTCCAGGTAACCCTAGACACCTGCATGTTCTGATTGGGACCTCAGTGGTCATGATCCTCTTCACCA---TCTTCTTCTTTCTCCTGCATCGCTGGTGCTCCAACAAAAAGA-GTAAGTCTCACGAAGCAGAGGCCAGAGACCTCAGGGTCGTGTGGGGAAGCGGGATGGGAGCACGCGGGTGTGTGTTCCTCACCGGCAGGATGGTCTCTGGCCCAAGGCAGAAGCCACAGAGGCAGAGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATCCTCATGTCCC-TGCAGCCACTGACATCCAGGAGAAGGTTCCGTGACAGGCAGAAAGTGGGAGGCAGAATCAATGGGATGGAAATTGAGAGCCATTCATGGGAAGGGGTCTTGAACTCAGAGAAACAGAATGTCTGAGCCTCGCTGTTGGCAGCTGAGGCACCTCAGGCATCTACGGCCTCCCCCTGTGTGTTGTAATCTGCACATGAAATGAGGACCCAGATGGGCCCTCCCAGCTGTTTTGATGACTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGGCCCAGCCTCGTGGATCGAATCTTATTCCCTACTAGTCCTGAAGAATGTGAGC-CCCTCCCTCACTCAACATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACCGCGTTCTCACACAGGGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAGCGTGTACACGGAACTTCCAAATGCTGAGCCCAGATCGAAAGTTGTCTTCTATCCATGAGCACCACCGTCAGGCCTTGAAGGGGTCTTCTAGGGAG i rheMac3.chr19 I 4 C 0 s papAnu2.chr19 47723226 1064 + 51301725 AGCAGGAGAAAGCTGAGTCTCCCACCATGTGGGTGCACGTCCTAAAGAGACGTTGTATATGGTTACCTGACCATCAAGAAATGCGAGACAATCCATAGAGAGGAACTGCTGTGATTAGCTTCTTGTTGGTGCCTCGTCTTCCTCCAGGTATCCCCAGACACCTGCATGTTCTGATTGGGACCTCAGTGGTCATGATCCTCTTCACcatcctcttcttctttctcctgcatCGCTGGCGCTCCAATGAAAAGG-GTAAGTCTCACGAAGCAGAGGCCACAGACCTCAGGGCCCTGTGGGGAAGCGGGATGGGAGCACGCAGGTGTGTGTTCCTCACTGGCAGGATGGTCCCCGGCCCAAGGCaggagccacagaggcagagctttcTAGAGAGAGCACCAGACACCCTGTTCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATTCTCATGTCCC-TGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGAAATTGAGAGCTATTTATGGGATGGGTCCTTGAACTAAGAGAGACAGAATGTCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCAGGCACCTACGGCCTCCCCCTGTGTGTTGGGCTCTGCACATGAAATGAGGACCCAGACGTGCCCTCCCAGCTGTTTTGATGACTTCCGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGTGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGCCCCAGCCTCGTGGATATAGTCTTATTCCCTACTAGTCCTGAAGAATGTGAGC-CCCTCCCTCACTCAATATTTCCCTCTCTGCAGGACCCTGATGAACCAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTCTCACACAGGGAAAAACCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAGTGTATACATAGAGCTTCCAGATGCTGAGCCCAGATTGAAAGTTG----------------ACCACAGTCAGGCCTTGAGGGGGTCCTCCAGGGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47440857 1075 + 50890351 AGCAGGAGGAAGCTGGGTCTCCCGCCATCAGGCCGCTTGTCCTAAGGAGACATTCCACATGGTTACCTGTCAATCAAGAAACGAGAGACAATCCATAAAAAGGAACTGCTATGATTAGCTTCTTATTGGAGTCTCTTCTTCCTCCAGGTAACTCCAGACACCTGCATGTTCTGATTGGGACCTCAGTGGTCATGATCCTCTTCACCA---TCTTCTTCTTTCTCCTGCATCGCGGGTGCTCCAACAAAAAGA-GTAAGTCTCACGAAGCACAGGCCACAGACCTCAGGGTCGTGTGGGGAAGC-GGATGGGAGCACGCAGGTGTGTGTTCCTCACCAGCAGGATGGTCTCTGGCCCAAGGCAGGAGCCACAGAGGCAGGGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACAATTGCCTGATTCTGAACTGTATCCTCAAGTCCC-TGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGGCAGAATCACTGGGATGGGAACTGACAGCTCTTCATGGGATGGGTCCTTCAGCTCAGAGAGACAGAATGTCTGAGTCTGGCTGTTGACAACTGAGGGACCTCAGGCACCTACGGCCT-CCCCTGTGTGTTGGACTCTGCACATGAAATGAGGACCCAGACGTGACCTCCCAGCTCTTTTGATGACTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGGCACAGTCCCGTGGATACTGCCTTATTCCCTAATAGTCCTGAAGAATGTGAGC-CCCTCCCTCACTCAACATTTCCCTCTCTCCAGGACCCGGATGAACAAGACCCTCAGGAGGTGACATACGCACAATTGAATCACTGTGTTCTCACACAGGGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACGCCCAACAGATACCAGCGTATACACGGAACTTCCAAATGCTGAGCCCAGATCGAAAGTTGTCTTCTACCCATGAGCACCACCGTCAGGCCTTGAAGGGGTCTTCTAGGGAG i chlSab2.chr6 I 55133 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e macFas5.chr19 55628470 24382 + 59248254 I a score=2230475.000000 s hg38.chr19_GL949747v2_alt 448558 1035 + 729520 ACAACAGCCCTGTCTCAAAACTGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGCATCGCTCTTCCTCACACCACAAATCTGAATGTGCCTCTCACTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGGAGAAAAAACACACTCCTTTGCTTAGCCCACAGTTCTCCATTTCacttgacccctgcccacctctccaacctaactggcttacttcctagt-ctacttgaggctgcaatcacactgaggaactcacaattccacacatacaagaggctccgtcttaacgcagcacttagacacgtgctgttccaccttccctcatgctgttccacctcccctcagactagctTTCAGCCTTCTGTCAGCAGTAAAACTTATATAC---TTTTTAAAATAACTTCAATGTAGTTTTCCATCCTTCAAATAAACATGTCTGCCCCCATGGTTTCGGTAATGGGACTCTTTTCTTGCCTAAGGCTTCCGGTGTTATCAGTACCATGTCCATATAATCCCATCTGTTCCCCACTGAGTTCTCATCCCTGGACTCTGATCTTCTGGAAGCAGGGTGGAGCCTCATTT-GTCTCTGGGACTCCAATTTCCATCCAAAGATGTAGCACATAGGAGGTTCCAAGGATCGCGAATCACATGAACAAGTGATACTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACAATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCATGGGG-ACACATATCAACACATCTTCTTTCATaatataaatatacggtcactcctccatatctgcggggtttacaggtgtttattgaaccaagtataaatcaaaaatattgagag-aaagtatccacagagtttcaaaaa--gcataactatgttaaatggacacaaatgaagctgtgtgtaggctgtatcaggaattataggtaatctag-agatgatttcatgtatacaggaggatgtgcataggttatttgcaaatgct s panTro4.chr19 59689098 1035 + 63644993 ACAACAGCCCTGTCTCAAAACTGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACcacgaatctgaacatgcctctctcttgcttacaaatgtctaaggtccccactgcctgctgcagagaaaacacactcctttgcttagcccacaattctccatttcacttgacccctgcccacctctccaacctaactggcttacttcctagt-ccacttgaggctgcaatcacactgaggaactcacaattccaaacatacaagaggctccctcttaacgcagcacttagacacgtgctgttccaccttccctcatgctgttccacctcccctcagactagctTTCAGCCTTCTGTCAGCAGTAAAACttatatatatattttttaaat---ttCAATGTAGTTTTCCCTCCTTGAAATAAACATGTCTGCCCTCATGGTTTCGGTAATGGGACTCTTTTCTTGCCTAAGGCTTCCGGTGTTATCATTACTATGTCCATATAATCCCATCTGTTCTCCACCGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAGAGTGGAGCCTCATTTTGTCTCTGGGACTCCAATTTCCATCCAAAGATGTAGCACATAGGAGGTTCCAAGGATCGCGAATCACATGAACAAGTGATATTCTTACTCTCTGCA-ACCTGGAAAGCTGGCAGAGTCATTCCAGGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCATGGGG-ACACATATCAACATATCATCTTTCATACTATAAATATAcggtcactcctctgtatctgtggggtttacaggtctttattgaaccaagtataaatcaaaaatattcagag-aaaatatccacagagtttcaaaaa--gcataactatgttgaatggacacaaatgaagctgtgtgtaggctgtattaggaattataagtaatctag-agatgatttcatgtatacaggaggatgtgcatatgttatttgcaaactgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56589040 1036 + 60714840 ACAACAGTCTTGTCTCAAAACCGGGTTGCCAGCTCCAATGTACCAGCAGCTGGAATCTGAAGACATCAGTCTTCATCTTAGGGGATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTTGCTTACAAATGTCTAA-GTCCCCACTGCCTGCTGGAGAGAAAACACACT-GTTTGCTTAGCCCACAATTCTCTATTTCacttgacccctggccacctctccagcctaactggcttacttcctagt-ctacttgaggctgcgatcacactgaggaactcacaattccaaacatacaagagggtccctcttaacacggcacttacacacgtgctgttccaccttccctcatgctgttccacctttcctcAGACTATCTTTCAGCCTTCTGTTGGCAGCAAAACttataaat---tttttttaataatttCAATGTAGTTTTCCCTCCTTCAAATAAACATGGCTGCCCTCATGGTTTCGGTAATGGGAATCTTTTCTTGCCTAAGGCTTCCGGTGTTATCAGTACCATGTCCATATTACCCCATCTGTTCTCCATTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAGGGTGGAGCCTGATTT-TCTTCTGGGACTCCAATTTCCATCCAAAGATGCAGCACATAGGAGGTTCCAAGGATCATGAATCACATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCAAGATGAAACATTTGCAGAGTCACAGGTCTTGTTAGTCTCATCTCCACGGGATACACATATCAACACATCATCTTTCATACTATAAATATAcagtcgctcctccatatctgtggggtttacaggtgtttattgaaccaacaataaatcaaaaatgttttgagaaaaaaatcccccaagtttcaaaag-caaaaaactatgttgaatcgatacaaatcgagtggcgtgtaggctgcgtcaggaattataagtaatcaag-agatgatttcatgtatacaggaggatgtgcatgggttatatgcaattgct i ponAbe2.chr19 C 0 I 18713 s nomLeu3.chr10_GL398297_2_random 8879 1036 - 21488 ACAGCAGCCCTGTCTCAAACCCGGCTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGGATCGCTCTTCCTCACACCACAAATCTG---GTGTCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCCCTtgacctgtgcccacctctccaacctaactggcttacttcctagtcctacttgaggctgcgatcacactgaggaactcacaactccaaacacacaagaggctccttcttaacacagcacttagacacgtgctgttccaccttccctcatgctgttccacctcccctcAGACTATCTTTCAGCC-TCTGTCAGCAGTAAAACTTATAAAT---TTTTTTTAATAATTTCTATGTAGTTTTCCCTCCTTCAAATAAACATGTCTGCCCTCATGGTTTCGGTAATGGGACTCTTTTCTTGCCTAAGGCTTCCGGTGTTATTATTACTATGTCCATATAACCCCATCTGTTCTCCACTAGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAGGGTGGAGCCTGATTT-TTCTCTGAGACTCCAATTTCCTTCCAAAGATGCAGCACATAGGAGGTTCCAAGGATCGTGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACCATGAAACATTTGTAGAGTCACAGGCCTTGTTAGTCtcatctccacgggg-acacatatcaacacatcatctttcatactagaaatatacagtcgctcctccatatctgtggggtttacaggtgtttattgaaccaacaataaatcaaaaatattttgagaaaaaaatccctgaagtttcgaaaagcgaaaaactatgttgaatcgacacaaattgagtggtgtgtaggctgtgtcaggaagtataagtaatcaagaagatgatttcatgtatacaggaggatgtgcatgggttatatgcaattgct i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chr19 60530400 1032 + 64156825 ACAACAGCCCTGTCTCAAAACCGGCTTCACAGCTCCAATGTACCAGCAGCAGGAATCTGAAGGTGTGAGTCTGCATCTTAGGACATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTCGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCActtcacttgacccctgcccacctctccaacct-actggcttacttcctagtcctactggaggctgtgatcacactgaggaactcacaattccaaacatacaagagactccctgttaacacagcacttagacacgtgctgttccatcttccctcatgctgttccacctgccCCCAGACTATCTTTCAGCCCT-TGGCAGCAGTGAAACTTATAAAT---TTTT--TTATCATTTCAACGTAGCTCTCTCCTCTTCAAATAAACACCTCTACCCTCATCCTTTAGGTAATGTGACTCTTTATTCGCTGAAAGTTTCTGGTGTTATCATTACTATGTCCATATAGCCCCATATGTTCTCCAATGGTTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAGAGTGGAGCCTGGTTT-CTGTCTGGAACTCCAATTTCCATCCAACGATGCAGCGCATAGGAGGTTGCAAGGATCGTGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACAGGG-ACACATGTCAACACATCATCCTTCATACTATAAATACAcagtcgctcctccgtatctgaggggtttacaggtgtttattgagccaactataaatcaaaaatattcagag-aaaaaatccacaaagttccaaaaa--gcaaaactatgttgaatggacacaaacggaatggtgtgtaggctgtatccggaattataagtaatctag-agatgatttcatgtacacaggaggatgagcatgggttatatgcaaacgct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55652852 1031 + 59248254 ACAACAGTCCTGTCTCAAAACCGGCTTCACAGCTCCAATGTGCCAGCAGCAGGAATCTGAAGGTGTGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCActtcacttgacccctgcccacctctccaacct-actggcttacttcctagtcctactggaggctgtgatcacactgaggaactcacaattccaaacatacaagagactccctgttaacacagcacttagacacgtgctgttccatcttccctcatgctgttccacctcccctcAGACTATCTTTCAGCCCT-TGGCAGCAGTGAAACTTATAAAT---TTTT--TTATCATTTCAATGTAGCTCTCTCCTCTTCAAATAAACACGTCTGCCCTCATCCTTTAGGTAATGTGACTCTTTATTGGCCGAAAGTTTCTGGTGTTATCGTTACTATGTCCGTATAGCCCCGTATGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTT-CTGTCTGGAACTCCAATTTCCATCCAACGATGCAGCGCATAGGAGGTTGCAAGGATCGTGAATGAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACAGGG-ACACATGTCAACACATCATCCTTCATACTATAAATACAcagtcgctcctccgtatctgaggggtttacaggtgtttattgagccaactataaatcaaaaatattcagag-aaaaaatccacaaagttccaaaaa--gcaaaactatgttgaatggacacaaacggaatggtgtgtaggctgtatccggaattataagtaatctag-agatgatttcatgtacacaggaggatgagcatgggttatatgcaaacgct i macFas5.chr19 I 24382 C 0 s papAnu2.chr19 47724290 1029 + 51301725 ACAACAGCCCTATCTCAAACCCAGCTTGCCAGCTCCAATGTACCAGCAGCTGGAATCTGAAGGCGCGACTCTACATCTTAGGGCGTCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTTGTTTTCCAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTGAGCCCACAATTCTCCATTTCACTTGacccctgcccacctctccaaCCT-ACTGGCTTACTTCCTAGTCCTACTGGAGGCTGCAGTCACACTGAGGAACTCACAATTCCAAACATACGAGAGGCTCTCTCTTAACACGGCACTTAGACACATGCTGTTCCACCTTCCCTCATGCTGTTCCACCTCCCCCCAGACTATCTTTCAGCCTTCTGTCAGCAGTGAaacttataaat---ttttaaaaataatttctacgTAGTTGCCTCTTCTTCAAATAAACATGTCTACCCTTATGGTTTCAGTAATGTGACTCTTTTCTTGCTGGAAGTTTCCGGTGTTATCATCGCTATGTCCATGTAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTC-GTCTCCAGGACTCCAATTT-CATCCAAAAATGCAGCACATAGGAGGTTCCAAGGATCGTGAATGAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACACCTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGG-ACACATGTCCACACATCAT-CTTCATACTATAAATACACAGTCGCTCCTCCAGATCTGTGGGGTTTACAGGTGTTTGTTGAGCCAACtataaatcaaaaatattcagag-aaaatat--acaaagtttC-AAAA--GCAAAACTATGTTGAATGGACACAAATGGAGCGGTATGTATGCTGTGTCAggaattataaataatctag-agatgatttcatGTATACATGAGGATATGCATGGGTTATATGCAATTGct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47441932 1032 + 50890351 ACAACAGCCCTGTCTCAAAACTGGCTTGACAGCTCCAATGTACCAGCCGCAGGAATCTGAAGGTGTGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACGTGCCTCTCTCTCGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACGCACTCCTTTGCTTAGCCCACAATTCTCCATTTCacttgacccctgcccacctctccaacct-actggcttacttcctagtcctactggaggctgcagtcacactgaggaactcacaattccaaacatacaagaggctccctcttaacacagcacttagacatgtgctgttccaccttccctcacgctgttccacctcccctcAGACTACCTTTCAGCCTTCTGTCAGCAGTGAAACTTAAAAAT---TTTT-TTTATCATTTCAATGTAGCTCTCTCCTCTTCAAATAAACACCTCTGCCCTCATCCTTTAGGTAATGTGACTCTTTATTCGCCGAAAGTTTCTGGTGTTATCGTTACTATGTCCATATAGCCCCGTATGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAG-GTGGAGTCTGATTT-CTGTCTGGAACTCCAATTTCCATCCGACGATGCAGCGCATAGGAGGTTGCAAGGATCATGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAACATGAAACATCTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGG-ACACATGTCCACACATCAT-CTTCATACTATAAATACAcagtcgctcctccagacctgtggggtttacaggtgtttattgagccaactataaatcaaaaatattcagag-aaaaattccacaaaatttcaaaaa--gcaaaactatgttgaatggacacaaatggaatggtgtgtaggctgtgtcaggaattatcagtaatctag-agatgatttcatgtatacaggagggtgaacctgggttatatgcaaacgct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T a score=16192.000000 s hg38.chr19_GL949747v2_alt 449593 9 + 729520 gtgccattt s panTro4.chr19 59690133 9 + 63644993 gttccattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56608789 9 + 60714840 gtgtcattt i ponAbe2.chr19 I 18713 C 0 s nomLeu3.chr10_GL398297_2_random 9915 9 - 21488 atgctattt i nomLeu3.chr10_GL398297_2_random C 0 I 872 s rheMac3.chr19 60531432 9 + 64156825 gtaccattt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55653883 9 + 59248254 gtaccattt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47725319 9 + 51301725 atgcctttt i papAnu2.chr19 C 0 T 17919 s chlSab2.chr6 47442964 9 + 50890351 gtgccattt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T a score=204022.000000 s hg38.chr19_GL949747v2_alt 449602 138 + 729520 catataagaggcttgagcatctacagattttggtatctgagtggagatctcaaaaccaatcacccacgaatagtgaaggatgaccgtatatgacttttatttctcaaatttaaatataaatcataaaAAATGTAC---AAC s panTro4.chr19 59690142 138 + 63644993 catataagaggcttgagcatctacagattttggtatctgagtggagatctcgaaaccaatcacccacgaatagtgaaggatgactgTATATGACTTTTATTTCTCAAATTTAAATATAAATCATAAAAAATGTAC---AAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56608798 141 + 60714840 tatgtaagaggcttgagcatctgcagattttggtatctgagtggagatcctgaaaccaatcactcacgaatagtgaaggatgactgTATATGACTTTTATTTCTCAAATTTAAATATAAATCATAAAAAATGTACAATAAC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60531441 137 + 64156825 tatgtaagaggcttgagcacctgcaggttttggtgtcagagcagagatcctgaaaccaatcacccgcgaatagtgaaggatgactgTATATAATTTTTATTCATGAATTTTAGAAATAAATCCT-CAAAATGCAC---AAT i rheMac3.chr19 C 0 I 3 s macFas5.chr19 55653892 137 + 59248254 tatgtaagaggcttgagcacctgcaggttttggtgtcagagcagagatcctgaaaccaatcacccgcgaatagtgaaggatgactgTATATAATTTTTATTCATGAATTTTAGAAATAAATCCT-CAAAATGCAC---AAT i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47707409 138 + 51301725 CACGCAAGAggcttgagcatctgcagattttggtctCTGAatggggatcctggaaccaatcacCCAGGAATAGTAAAGGACAACTGCATATAATTCTTAtttgccaattttaaaaataaagcataaaaaatttac---aac i papAnu2.chr19 T 17919 I 3 s chlSab2.chr6 47442973 138 + 50890351 tatgtaagaggcttgagcacctgcagattgtggtatctgagtggagatcctgaaaccaatcacccacgaatagtgaagcacgactgTATCTAACTTTTATTTCTCAATTTTAAATATGAATCATAAAAAATTTAC---AAC i chlSab2.chr6 C 0 I 3616 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10_GL398297_2_random 9924 872 - 21488 I a score=372126.000000 s hg38.chr19_GL949747v2_alt 449740 274 + 729520 TAGATAAAA-ACTAAGAAGTGTTTTTATA-GTGTCAG-------TTagatttattttttactaggtgtaacccattggtttaatattatttattgagaagacattctatgccaccttaaaccacacagcagcctttgtcaactctaaagggattgtgtgtacatggatgtattttagacactgttt-ctgctaaggggctctctgtgtccacactcttgatgacgctgcactttatgtagccttatagaaccctttaa-atttagtagccagagccctctaattt s panTro4.chr19 59690280 274 + 63644993 TAGATAAAA-ACTAAGAAGTGTTTTtata-gtgtgag-------ttagatttattttttcctaggtgtaacccattggtttaatattatttattgtgaagacattctatgccaccttaaaccacacagcagcctttgtcaactaaaaagggactgtgtgtacgcggatgtactttagacactgttt-ctgctaaggggctctctgtgtccacactcttgaggatgctgcactttatgtagccttataaaaccctttaa-atttagtagccagagccctctaattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56608939 282 + 60714840 TAGATAAAA-ACTAAgaagtgtttttataggtgtgagaataagtgtagatttattttttcctatgtgtaaccctttggtttaatgttatttattgagaagacgttctatgccaccttagaccacacggcagcctttgtcaagtataaagagactgtgagtacaaggatgtattttagatcctgttt-ctgctaaggggctctctgtgtccacactcttgaggacgctgcactttatgtagccttatagaaccctttaa-atttcgtagcgagagccctctatttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60531581 282 + 64156825 AAGATAAAACAATAAGCAGTGTTTTTACA-GTGTGAAAATAAGCTtagatttattttttcctacgtgtaaccctctggtccaatgttatttatggagaagacattcttttccaccttaacccacatggcagcctctgtcaactataaagggactgtgtgtacacggatgtatttt--acactctttcctgcttagtggttctctgtgtccactctcacgaggatgctgcaccttatgtagccttagagaaccccttaacatttggtagcctgaatcctctaattt i rheMac3.chr19 I 3 T 10348 s macFas5.chr19 55654032 282 + 59248254 AAGATAAAACAATAAGCAGTGTTTTTACA-GTGTGAAAATAAGCTTAGATTTATTTTTTCCTACGTGTAACCCTCTGGTCCAATGTTATTTATGGAGAAGACATTCTTTTCCACCTTAACCCACATGGCAGCCTCTGTCAACTATAAAGGGACTGTGTGTACACGGATGTATTTT--ACACTCTTTCCTGCTTAGTGGCTCTCTGTGTCCACTCTCACGAGGATGCTGCACCTTATGTAGCCTTAGAGAACCCCTTAACATTTGGTAGCCTGAATCCTCTAATTT i macFas5.chr19 I 3 I 28 s papAnu2.chr19 47707550 279 + 51301725 aaaataaaa-aataagaagtgttTTTATA-GTGTGAGGATAAGTTTAGATTGATTTTTTCCTACGTGTAACCCTATGGCCCTGTGTTATTTGTTGAGA----ATTCTATTCCACCTTAAATCACATGGCAGCCTGGGTCAACTGTAAAGGGACTGTGCATCCATGGGTGTATTTTAGACAGTCTTTTCTGCCCAGTGGCTCTCTGTATCCCCTCTGATGAGGATGCTACACTTCATGTAACCTTATAGAACCCCTTAAAATTTGGTAACCTGAGTCCTCTGATTT i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47446727 281 + 50890351 AAGATAAAA-AACAAGAAGTG-gtttata-gtgtgagaatacgtatagatttatttttttctatgcgtaacgct-tgggcccatgttatctatggagaagacattctattcctccttaaaccacacggcagtctttgtcaactctaacgggactgtgtgtgcacggatgtattttagacactgttttctgataaggggctctctgtgttcgctcttttgaggatgctgcacattatgtaggcttatacaaagccttaaaatttggtagctggagtcctttagttt i chlSab2.chr6 I 3616 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10_GL398297_2_random 9924 872 - 21488 I a score=17640.000000 s hg38.chr19_GL949747v2_alt 450014 23 + 729520 gttattATAGGCTA-----tttgct---ttt s panTro4.chr19 59690554 26 + 63644993 gttattATAGGCTA-----CTTGCTAttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56609221 22 + 60714840 gttattATAGGCTA-----TATGC----ttt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55654342 23 + 59248254 ATTATTATAGGTTA-----TTTGCT---TTT i macFas5.chr19 I 28 T 27177 s papAnu2.chr19 47707829 28 + 51301725 GTTATTATAGgttatttagtttgct---ttt i papAnu2.chr19 C 0 I 7 s chlSab2.chr6 47447008 28 + 50890351 CTTATTATAGGCTATTTGCTACGCt---ttt i chlSab2.chr6 C 0 I 4 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10_GL398297_2_random 9924 872 - 21488 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=366178.000000 s hg38.chr19_GL949747v2_alt 450037 510 + 729520 tttttcttgaggcggagtcttgctctgtcgcccaggctggactgcagtgacacaatctcagctcactgcaacctccacctcccaggttcaagcgattctcgtgcctcagcctcttgagcagctggcgttacaggtgcctgccaccaggcacggctaatttttggatttttagcagagacacggtttcactatgttgaccaggctgctctcaaactccttatctcagttgatccgcccacctcggcttcccaacgtgctgggGAAAACTTGATTTTCTATAGCATTATGTTACTGGATATTTCTGTAAAATTTAAAACgagggagggagagagacagagagagaTCAAACTCCAGAGTTGGGACTCTGGAATCTTGGGTCATGAGACAAATTTTAGATTAAACTACAAAACTCCAGAATTTACAGG-TGTGGTTTTTGCTGATAAAGTACGATTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAATTTAAATCATTTTAGCTGGT s panTro4.chr19 59690580 509 + 63644993 tttttcttgaggcggagtcttgctctgtcgcccaggctggactgtagtggtgcaatctcagctcactgcaacctccgcctcccatgttcaagcgattctcgtgcctcagcctcttgagtagctggcatttcaggtgcctgccaccaggctcggctaatttttggatttttagcagagacacggtttcactgtgttggccaggctgctctcaatctcctcatctcagttcatccgcccacctcggcttcccaacgtgctgggGAAA-CTTGATTTTCTATAGCATTATGTTCCTGGATATTTCTGTAAAATTTAAAATGAGGGAGGGAGAGAGACAGAGAGAGAGCAAACTCCAGAGTTGGGACTCTGGAATCTTGGGTCATGAGACAAATTTTAGATAAAACTACAAAACTCCAGAATTTACATG-TGTGGTTTTTGCTGATAAAGTACAATTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAATTTAAATCATTTTAACTGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56609243 509 + 60714840 tttttcttgaggtggagtcttgctctgtcgcccaggctggactgcagtggcacaatctcagctcactgcaacctccgtctcccaggttcaagcgattctcgtgcctcagcctcttgagtagctggcattacaggtgcctgccaccaggcatggctaattcttgaatttttagcagagacacggtttcactatgttggccaggctactctcaaactcttcatctcagtcgatccgcccacctcggcttcccaacgtgctgggGGAAACTTGATTTTCTATAACATTATGTTACTGGATATTTCTGTAAAGTTTAAAATGAGGGAGGGAGAGAGACAGAGAGAGAGCAAACTCCAGAGTTGGGACTCTGGAATCTTGGGTCATGAGACAAATTTTAGATAAAACTACAAAAATCCAGAATTTACATGTTGTGG--TTTGCTGATAAAGTACAATTCTAAGAAAGTAAATAATTGCATAATCCTTCCCTGGGGACTTAAATCACTTTAACTGGT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47707864 503 + 51301725 ttttccttgagacagactcttcctctgtcacccaagctggatttcagtggcacaagctcagctcactgcaacctccgcctcccaggttcaagcaattctcgtgcctaggcctcttgagtagctgggagtacaggtgcccgccaccaagccccactaacttttgtatttttagcagagacagggttgaaccatgttggccaggctggtcttgaactgccgacctcaagtgatccacccacctctgcctcccaaagtgctgggggaagCTTGATTTTCTATCGTAT--TGTTACTGGACAttcctataaaatttaaaatgagggagggagagagac----agagagcaaac-CATGAGTTTGGAATCTGGAATCTTGGGTCATGAGACAAATTCTAGATAAAATGAC-AAAATCCAGAATTTACTTGTTGTGTTTTCTGCTAATAAAGTGGGATTCTAAGATCATAAATAACTGCATAATCCTTCACTGTGAATTTAAATCATTTTCACTCCT i papAnu2.chr19 I 7 C 0 s chlSab2.chr6 47447040 510 + 50890351 tatttcttcaggcagagtctcgctctgttacccaggctggactgcagtggcacaatctcggctcactgcaacttccgcctcccaggttcaagcgattctcctgcctcagcctcttgagtagctggcatgacaggtgcccactgccaggcatggctaatttttgtatgtttagcagagacatggtttctctaagttggccagggaggtctcgaactcccgacctccgttgatccacccacctcggcttcccaaagtgctgggGGACACTTGATTTCCTACAGTATTATGTTACTGGATATTTCCACACAATTTAAAATgagggaggcagagagacagagagagagcgaAC-CATGTGCTGGGACTCTGGAATCTCAGGTCATGAGACAAATTGTAGATAAAATGACAAAAATCCAGAATTGACATGTTGTGGGTTTTGCTGATAAAGAACAGTTCTAAGACTGTAAATAATTGCATAATCCTTCCCTGGGTATTTAAATCATTTAAACTGGT i chlSab2.chr6 I 4 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10_GL398297_2_random 9924 872 - 21488 I e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=5549.000000 s hg38.chr19_GL949747v2_alt 450547 7 + 729520 TCTGCTG s panTro4.chr19 59691089 7 + 63644993 TCTGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56609752 7 + 60714840 TCTGCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 10796 7 - 21488 tcTGGTT i nomLeu3.chr10_GL398297_2_random I 872 C 0 s papAnu2.chr19 47708367 7 + 51301725 TCTGGGT i papAnu2.chr19 C 0 I 18182 s chlSab2.chr6 47447550 7 + 50890351 TCTGCTG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=28302.000000 s hg38.chr19_GL949747v2_alt 450554 43 + 729520 TAATACTAGAAATACAAGCATGAAAAATTCTAATGGTTT-ATTA s panTro4.chr19 59691096 43 + 63644993 TAATACTAGAAATACAAGCATGAACAATTCTAATGGTTT-ATTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56609759 43 + 60714840 TAATACTAGAAATACAAGCATGAAAAATTCTAATGGTTT-ATTA i ponAbe2.chr19 C 0 T 18788 s nomLeu3.chr10_GL398297_2_random 10803 41 - 21488 TAGTACTAGACACTGAAGCA-GGAAAATTAGAATGGCTT-TTT- i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47726556 41 + 51301725 TAGTACAAGAAACTCAAGCAGGAAA-ATTAGAATGACTT-TTT- i papAnu2.chr19 I 18182 C 0 s chlSab2.chr6 47447557 43 + 50890351 TCATACTAGAAATACAAGCATGAAACATCCTAATGGTTTATTC- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=371289.000000 s hg38.chr19_GL949747v2_alt 450597 347 + 729520 GTCACAATGACTCCGAAAACATTAATAATACCTATTAGATACTTTGCATATTACACAGGAAGAAGAGTTTGAATCTCAGATAAAAACAATAAAAATACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGGCATCTTGTGTTCGGGAGGTTGGATCTGAGACGTGTTGTGAGT-TGGTCATAGTGAAGGACGCGAGGTGCCAA--------------------TTCTAGTGAGAACAATTTCCAGGAAGCCGTGTTCCGCTCTTGAGCAAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCGTGATGTGGTCAACATGTAAACTGCATGGGCAGGGCGCCAAATA s panTro4.chr19 59691139 348 + 63644993 GTCACAATGTCTCTGAAAACACTAATAATACCTATTAGATATTTTGCATATTTCACAGGAAGAAGAGTTTGAATCTCAGATAAAAACAATAAAAATACATGAAAAGTCTTTCATGTTAGCACAGATTTTAGTCATCTCATGTTTGGGAGGTTGGATCTGAGACGTGTTTTGAGT-TGGTCATAGTGAAGGACGCGAGGTGTCAA-------------------ATTCTAGTGAGAACAATTTCCAGGAAGCCGTGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAGCATGTAAACTGCATGGGCAGGGCGCCAAATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56591014 365 + 60714840 GTCACAATTACTCTGATAATGTTAATAATACCTGTTAGATATTTTGCACATTACACATGAAGAAGAGTTTGAATCTCCGATAAAAAC---ACAAATACATCAAAAGTCTTTAATGTAAGCACAGAATTCAATCATCTGGTGTGTGAGAGGTTGGATCTGAGACGTCTTTTGAGTCTGATCATAGTGAACAATGCAAGGTGGCAGTGAACGATGCAAGATGGCAATTGTAGTCACAACAATTTCCAGGAAGCCATGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAAAGCCTGTGTACGTCACCCTCCCATGATGTGGTCAGCATGGAAACTGCATGGGCAGGGCGCCAAATA i ponAbe2.chr19 T 18788 C 0 s nomLeu3.chr10_GL398297_2_random 10844 345 - 21488 GTCACAATTCCTCTGATAATGCTAATAATACCTCTTAGATATCTTGCACATTACACATGAAGAAGAGTTTGAATCTCAGATAAAAAC---AAAAATACATCAAAAGTCTTTAATGTAAGCACAGAATTCAATCATCTTGTGTATGAGAGGTTGGCTCTGAGACGTCTTTTGAGTCTGGTCATAGTGAATGACGCAAGGTGGCAA--------------------TCGTAGTCACAACAATTTCCAGGAAGCCATGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACATCACCCTCCCATGATGTGGTCAACATGTAAACTGCATGGGCAGGGCGCCAGATA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47726597 344 + 51301725 GTCACAATTATTCTGATAATGTTAATAATACTTGTCAGATATTTTGCATATTACACATGAAGA--AGTTTgaatctcagataaaaacaacaaaagtacaTCAAAAGTCTTTAATGT-AACCCGGAATTCAATCATCTTGTGTTCGAAAGACTGGATCTGAGACGTGTTTTGAGC-TGGTCATAGTGAATGAAGCAAGGTGGCAA--------------------TTGTAGTCACAACAATTTCCAGGAAGCCATTTTCTGCTCTTGGCTGGAGGCCCGCTGGGCGTCATGCAAGGTAGAAACAGCCTGCGTATGTCACCCTCCCATGATGTGGTGAGCATGTCAACTGCATGGGCAGGGCGCCACATA i papAnu2.chr19 C 0 I 17831 s chlSab2.chr6 47447600 347 + 50890351 GTCACAATTGCTCTGACAACGTTCATAATACCTATTAGATATTTTGCATATTACACACGGAGAAGAGTTTGAAACACAGATAAAAACAACAAAAATACGTGAAAAGTCTTTCACGTCAGCACAGATTTTAGTCACCTCGTGTCCGGGAGGTTGGATTTGAGACGTGTTTTGAGC-TGGTCAGAGTGAAGGACGCAAGGTGTCAG--------------------TTCTAGTGAGAACCATTTCCAGGAAGCCATTTTCCCCTCTTGAGTGAGCACCCGCTGCGCCTCATGCAAGGTAGGAAGAGTCTGCGTACGTCACCCTCCCATGATGTGGTCAGCACGTCAACTGCATGGGCAGGGCGCCAGATA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=128812.000000 s hg38.chr19_GL949747v2_alt 450944 112 + 729520 ACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCA------CCATGTCGCTCATGGTCATCAGCATGGCGTGTGTTGGTGAGTCCTGGAAAGGAA s panTro4.chr19 59691487 112 + 63644993 ACATCCTGTGCGCTGCTGAGCTGAGCTGGGGTGCGGCCGCCTGTCTGCACCGGCAGCA------CCATGTCGCTCATGGTCGTCAGCATGGTGTGTGTTGGTGAGTCCTTGAAGGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56591379 112 + 60714840 ACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCA------CCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 11189 112 - 21488 ACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACAGACGGCA------CCATGTCGCTTATGGTCGTCAGTATGGCATGTGTTGGTGAGTCCTGGAAGGGAA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47744772 118 + 51301725 ACATCCTCTGCACCGGTCAGTCGAGCAGAGTCACTGCGTCCTGGCAGCAGAAGCTGCACCAAGTCCATGTCGCTCACGGTCGTCATCCTGGCCTGTCTTGGTGAGTCCTGGAAGGGAA i papAnu2.chr19 I 17831 T 36017 s chlSab2.chr6 47447947 112 + 50890351 ACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCA------CCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=34448.000000 s hg38.chr19_GL949747v2_alt 451056 59 + 729520 TAGAGGGAGGGAGTGCGGGGATGGAGATCTGGGCCCAGAGGTGGAGATATAGGCCTGGA s panTro4.chr19 59691599 59 + 63644993 TCGAGGGAGGGAGCGCTGGGGTGGAGGTCTGGACCTGGAGGTAAAGATATGGGCCTAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56591491 59 + 60714840 TCGAGAGAGGGAGTGAGGGGATGGAGATCTCAGCCTAGAGGTAAAGATATGGGCCTGGA i ponAbe2.chr19 C 0 I 18770 s nomLeu3.chr10_GL398297_2_random 11301 39 - 21488 TCGACGGAGGGAGTGCGGGGATGGGGATCTCATCCTGGA-------------------- i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47708873 58 + 51301725 TTCATGGAGGGAGCACT-GGGTGGAGATCTGGGCCCGGAGGTGGAGATATGGGCCTAGA i papAnu2.chr19 T 36017 C 0 s chlSab2.chr6 47448059 38 + 50890351 TCGACAGAGGAAGCGCTGGGGTGGAGATCTGGGCCTGG--------------------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=60663.000000 s hg38.chr19_GL949747v2_alt 451115 118 + 729520 --------------------GGTGGAGTTATGGGCCTGGAGTGGAGATCTGGGCCTGGAGT-GGATATATGGGCCTGGAGATGGAGTGATGGGCCTAGAAGTGGAGATCTGGGTCTGGAGTGGAGATATGGGCCTGGAG------------------- s panTro4.chr19 59691658 118 + 63644993 --------------------GGTGGAGTTATGGTCCTGGAGTGGAGATCTGGGTCTGGAGT-GGATTTATGGGCCTAGAGATGGAGTGATGGGCCTAGAAGTGGAGATCTGGGTCTGGAGTGGAGATATGGGCCTGGAG------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610320 116 + 60714840 --------------------GGTGGACTGATGGGCCTGGAGTGGAGATCTGGGCCTGGAGT-GGTGTTACCGGCCTGCAG-TAGAGATATGGGCCT-GGAGTGCAGATATGGGCCAGGAGTGGAGATGTGGGTCTAGAG------------------- i ponAbe2.chr19 I 18770 C 0 s nomLeu3.chr10_GL398297_2_random 11340 96 - 21488 --------------------GGTAAAGATATGGGCCTGGAGGGGAGATCTGGGTCTGATGT-GGAGATATGGGACTGGAG----------------------TGAGTTCTGGGCCTGAAGTGGAGATGTGGGACAGGAA------------------- i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47708931 157 + 51301725 GGTGAAGATACGGGTCTAGAGGTGGCGttatgggcctggagtggagatctgGGCCTAGAGGTGGAGATACAGGTCTAGAGATGGAGttatgggcct-ggagtggagatctgGGCCTTGAGTGGAGATAtgagcctggagtggagatatgggtCTAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47448097 64 + 50890351 ----------------------------------------GTGGAGATCTGGGCCTGGAGG---------------------GGAGATATGGGCCT-GGGGTGGAGATCTGGGCCTGGCATAGAAA-------------------------------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=83864.000000 s hg38.chr19_GL949747v2_alt 451233 231 + 729520 GTGGAGA--------------------TATGGGCCTGGAGTGGAGATCTGGGCCTGGAGTGGAGATAGGAACCCG-----------------------------------------------------------------------------GAGGGGAGATAGGAGCCTGGAGTGAAGATATTGGCCTGG-GATGGAGATATGGGCCTGGAGTGGAGACATGGGCCTGGAGGTGGAGATATGGGCCTGGA----------------------------GGTGGAGATATGGGCCTAGAGGTGGATA---------------------------------------TCTGGGCCTGGAGTGGACATATGGGCCTAGGATGGAGATATGGGCTTGGG s panTro4.chr19 59691776 192 + 63644993 GTAGAGA--------------------TATGGGCCTGGAGTGGAGATCTGGGCCTGGAGTGGAGATAGGAACCTG-----------------------------------------------------------------------------GAGGGGAGATAGGAGCCTGGAGTGGAGACATGGGCCTGGAGGTGGAGATATGGGCCTGTAGTAGAGTTATGGGCCAGGAG-------------------------------------------------TGGAGATATGGGCCTAGAGGTGGATA---------------------------------------TCtgggcctggagtgga-------------------gatatgggcttggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610436 191 + 60714840 GTGGATA--------------------TCTGGGCCTGGAGTGGAGATATGGACCTAGGATGGAGATATGGCTCTG-----------------------------------------------------------------------------G---------------CTGG---GGAGATATGGGACTGG-AGTAGAGATATGGGCCTGAAGTGGAGATATGGGCTTGGGG-------------------------------------------------TGGAGATCTGGGCCT-GGGGTGGAGA---------------------------------------TATGGGCCTGGATTGGAGATATGGGCCTAAGGTGGAGATCTGTGCCTGGA i ponAbe2.chr19 C 0 T 19077 s papAnu2.chr19 47709088 393 + 51301725 GTGGAGATATGGGTCTACAGATGGAGttatgggcctggagtggagatctgggcctggagtgggGATATGGTCCTGGAGTGGAGATCTCGGCCTGGAGTGGATATATGGGCCTAGAGGTGGAGTGATGGGCCTGAAGTGGAGGTATGGGGCTAAAGTGGAGATAtgagcctggagtggagatatgggctTGG-AATGAAGatatgggcctggagtggagatatgagcctggag-tggagatacGGGCCAGTGGAGATACGGGCCAGTGGAGATACGGGCCAGTGGAGATATGGGTCT-GGCATGGAGATCTGGGCCAGGAGTGGAGATATGGGTCTAGAGGTGGAGttatgggcctggagtggagatatgggcctggagtGATGAcgtgggcctgga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47448161 202 + 50890351 ---------------------------TTTTGGCTTGGAGGTGAGATTTGGGCCTAGAGTAGAGATACGAACTTG-----------------------------------------------------------------------------AAATAGAGATAGGATCCTGGAGTAGAGACATGAGCGTGG-AGTGGAGATACGGGTCTAGAGTGGAGATATGGGCCTGG-------------------------------------------------AGTGGAGATATGGGTTT-GGTGTGGAGA---------------------------------------TATGGGCCTAGGGTTGAGATATGGGCCTGGAGTGGAGATATTAGCCTGGA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10_GL398297_2_random 11436 0 - 21488 C e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=72789.000000 s hg38.chr19_GL949747v2_alt 451464 114 + 729520 GTGGAGATATGGGCCTGGATTGGAGATATGGGTCTAGGGTGGAAATATTGGCCTGGAGTGGAGATAtgggcctggagtggagatatgggcttggggtggggataggggcctggg s panTro4.chr19 59691968 114 + 63644993 gtggaggtatgggcctggattggagatatgggcctagggtggaaatatcagcctggagtggatatatgggcctggagtggagatatgggcttggggtggggatatgggcttggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56591550 114 + 60714840 GTGGAGATATGGGTCTGATGTGGAGAAATGGGCCTGGAGTGGAGATATGGGCCTGGAGAGGAGATACAGGCCTGGAGTGGAGATACAGGCCTGGAGTGGAGATATGGGCTTGGG i ponAbe2.chr19 T 19077 C 0 s papAnu2.chr19 47709481 114 + 51301725 gtggagataagggcctggggtggagatatgaacctggagtggagatatgagcctggagtggagatttgggcctggagtggagatatgggcctggaaTGAAGATATGGGACTGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47448363 113 + 50890351 TTGGAGATAAGGGTTTGGAGTGGAGATATGAGCCTGGAGTACAGATATGAGCCTGGAGTGGAGATATCAGCATGGAGCGGACATGTGGGCCTGTTGTGTAGATCTAGGCCTCG- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10_GL398297_2_random 11436 0 - 21488 C e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=6058.000000 s hg38.chr19_GL949747v2_alt 451578 7 + 729520 gtgcgga s panTro4.chr19 59692082 7 + 63644993 gtgtgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56591664 7 + 60714840 GTGGGGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 11436 7 - 21488 GTGTTGA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47709595 7 + 51301725 GTGGAGA i papAnu2.chr19 C 0 I 35306 s chlSab2.chr6 47448476 7 + 50890351 GTGCAGA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=882968.000000 s hg38.chr19_GL949747v2_alt 451585 889 + 729520 tatgggcctggaggct--gggtctCTACACAGCCGACAGCCCTGTTCTTGGGTGCAAGCAGGCACTGAGGGTGAGTTTCCCTTCAGCCCAGCAAGGGCCTGGCTACCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGAGT-CCTGGTTTGCCTGC-----AG--ATGGATGGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGACACATGAGGGTGAGTCCTTCTCCAAACCTTCGGGTGTCATC-TCCCCACA----TAAGAGGATTTTCCTGAAACAGGA-------------------------------------GGGAAGCCCGGTGGGGGATTTTCTTATAAACAAGGATGAGGAGACCCTGGGGTGCTCAGCCCACAGTTCCGACCTTGCCCTCCCCAGCCTTCCTTTCCCTTGGCTGAGTCAGGTTCTGTGGGAACCCGGGAGGGTAGACTGGGGTCCTCCAAGCTGGGCTGTGCGGCTG--GGATGTGGTGTCACTGGCAGAGGAAGGGAGCAAAGCAGTGCTAGGAACAGCAGG-CCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGCGTTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACC-TCAGAGGTGGGGGAACCCCAGCCAGGGCCCTGACCTTCCAAATCCTCTGTTGGGGGCTCAGTTGTGTATTGTGGTTCACACATTGGCTGATATTCCATTCACAAAGAACATGCCCTCGACCCCATGTCTA-TTTGTGTTGTTTTATGTGAGTAATCTTGCAGTATTAAAATCTAGTAGGAGTCCCTTACTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTGTTGTAGAGAGACGCCAAGTCTATGCGGGGTGGGTCCTTCCCGTACCCATGGGCACCCAAGTGTGGTAGGAGCCT s panTro4.chr19 59692089 889 + 63644993 tatgggcctggaggct--gggTCTCTGCACAGCTGACAGCCCTGTTCTTGGGTGCAGGCAGGCACTGAGGGTGAGTTTCCCTTCAGCCCAGCAAGGGCCTGGCTACCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGAGG-CCTGGTTTGCCTGC-----AG--ATGGATGGTCCATCACGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGAGGGTGAGTCCTTCTCCAAACCTTAAGGTGTCATC-TCCCCACA----TAAGAGGATTTTCCTGAAACAGGA-------------------------------------GGGAAGCCCGGTGGGGGATTTTCTTATAAACAAGGATGACGAGACCCTGGGGTGCTCATCCCACAGTTCCGACCTTGCCGTCCCCAGCCTTCCTTTCCCTTGGCTGAGTCAGGTTCTGTGGGAACCCGGGAGGGTAGACTGGGGTCATCCAAGCTGTGCTGTGCGGCGG--GGATGTGGTGTCACTGGCAGAGGAAGGGAGCAAAGCAGTGCTAGGAACAGCAGG-CCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGCGTTTCCATGACTGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACC-TAAGAGGTGGGGGAACCCCAGCCATGGCCCTGACCTTCCAAATCCTCTGTTGGGGGCTCAGTTGTGTATTGTGGTTCACACATTGGCTGATATTCCATTCACAAAGAACATGCCCTCGACTCCATGTCTA-TTTGTGTTGTTTTATGTGAGTAATCTTGCAGTATTAAAATCTAGTGGGAGTCCCTTACTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTGTTGTAGAGAGACGCCAAGTCTATGCGGGGTGGGTCCTTTCCGTAGCCATGGGCACCCAAGTGTGGTAGGAGCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56591671 887 + 60714840 TATGGGCCTGGAGCCT--GGGTCTCTGCACAGCCCACAGCCCTGTTCTTGGGTGCAGGAAGGCACTGTGGGTGAGTTTACCTTCAGCCCAGGAAGGGCCTGGCTACCAAGACTCACAGCCCAGTGCGGGCAGCAAGGGAGG-CCTGGTTTGCCTGC-----AG--ATGGATCGTCCATCATGATCTTTCTTTCCAGGGTTTTTCTCGCTGCAGGCGGCCTGGACACATGAGGGTGAGTCTTTCCCCAAACCTGAGGGTGTCATT-TCCCCACA----TAAGAGGATTTTCCTGAAACAGGA-------------------------------------GGGAAGCCCGGTGGGGGATTTTCTTATAAATAAGGATGAGGCGACCCTGGGGTGCTCAGCCCACAGTTCTGACCTTGCCTTCCCCAGCCTTCCTTTCCCTTGGCTGAGTCAGGTTCTGTGGGAACCCGGGAGGGTAGACTGGGGTCCTCCAAGCTGGGCTGTGAGGGGA--AGATATGGTGTCACTGGCAGAGGAAGGGAGCAAAACAGTGCTAGGAACAGCAGG-CCTCTGAAGACAAAGGTGTAACTCACACCCTCCAGCGTTTCCATGACGGTAGGGGCTGCAGTGTGACTGCTGTCATTCTACC-TAAGAGGTGGGGGAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCAGTTGTGTATTGTGGTTCACGCATTGGCTGATATTCCATTCACAAAGGACATGCCCTCGACTCCATGTCTA-TTTGTGTTGTTTTATCTGAGTAATCTTGCAGTATTGAAATCTAGTAACAGTTGCTTATTCAGCACCTGCTCAAAGTTCTCAGCTGACAC--TTGTTGTAGGGAGACACCATGTCTATGTGGGATGGGTCTTTCCCGTAGCCCTGTGCACCCAGGTGTGGTAAGAGTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 11443 891 - 21488 TCTGGGCCTGGAGCCT--GGGTCTCTGCACAGCCGAGAGCCCTGTTCTTGGCAGCAGGTAGGCAGCGAGGCTAAGTTTACCTTCAGCCCAGCAAGGGCCTGGCTGCCAAGACACACAGCCCAGTCGGGGCAGC-AGGGTGC-CCTGCTTTGCGTGCGGATGGG--ATGGATCCTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGCGGCCTGGCCACATGAGGGTGAGTCCTTCTCCAAACCTTAGGGTGTCATC-TCCCCACA----TAAGAGGATTTTCCTGAAACAGGA-------------------------------------GGGAAGCCCAGTGGGGGATTTTCTTATGAACAAGGATGAGGAGACCTGGGGGCGCTCAGCCCACAGTTCTGACCTTGCCCTCCCCAGCCTTCCTTTCCCTTGGCTGGGTCAGGTTTTGTGGGAACCCGGGAGGGTAGACTGGGGTCCCCCAAGCTGGGCTGTGCGGGGG--GGATGTGGTGTCACCGGCAGAGGAAGGGAGCAAAGCAGTGCTAGGAACAGCAGG-CCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGCGTTTCCGTGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACC-TAAGAGGTGGGGGAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCAGTTGTGTATTGTGGTTCACGCATTGGCTGATATTCCATTCACAAAGGACATGCCCTCGACTCCATGTCTA-TTTGTGTTGTTTTCTGTGAGTAATCTTGCAGTATTCAAATCTAGTAAGAGTCGCTTATTCAGCACTTGCTCAAAGTTCTCAGCTGACAC--TTGTTGTAGGGAGGCGCCAAGTCTATCCCAGGTGGGTCCTTCCTGTAGCCCTGGCCACCCAGGTGTGGTAGGGGCCT i nomLeu3.chr10_GL398297_2_random C 0 I 960 s papAnu2.chr19 47744908 903 + 51301725 TACGGGCCTGCAGATTCGGGGTCTCC---CAACGGGGAGCCGTGTT--CTGGAGCAAGCGGGTGGTGAGGCTGAGTGAACGTTCAGCCCAGCGAGG-------CGCCCAATGGC---------TGGGAGGAA-AGGGCAGG-------TTG-CTGC-----AGACATGAATAGTTCATCATGATCTTTCTTTGCAGGGTTCTTCTTGGACCAGAGGGTGTGGGCACACGTGGGTGAGTCCTTCCCAAA----TGATGGGTTGCCATCCCCACCGATACAAGTGAATTTTCCTGAGAAGGGAGGCAGGCAGCACAGAGGGTGGCTGATGGACTGACCGTGGGAAAGCCTGTGGGGAAATCTCTCGTGAACTAGGAAGAGGAGACCCTGGGATGCTCGGCCCTGAGTTCTGTCTTATCCCTCCCCAGCCGTTCTTCCCTGTGGCTGAGCCTAGCTCTGTGTGGCCCAGGGAG---AGACTTGGGCGCTCAAAGCTGGGGTGTCGGGGGATGGGATATGGTGTCACtggcagaggagggaagggaagcaaTGCTAGGAACAGCAGGTCCTCTGAGGACAAGAGGGTAAATCACTCTCTCCAGTGTTTCCATGATGGTCGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTGGGGGAACCACAGTCACGACCCTGACATTCCAATCCCTCTGATGGGG-CTCAGTTGTTCATTATGGTTCAGGCATTAGCTGATATTCCATCCACAAAGGTCGTACCCTCAGCTGCATGTCTACTTTGTGTTGTTTGGTGTAACCAATCTTGCAGTATTAAAATCTAGTAAGGGTTCCGTACTCAGCACCTGCTCAGAGTTTTCAGCCCATACTTTTGTTGTAGGGAGACGCCATGTCTATGTGGGATGGGTTCTTCCTGTAGCCCTGGACACCCAGGTGTGGTAGGAGTCT i papAnu2.chr19 I 35306 C 0 s chlSab2.chr6 47448483 876 + 50890351 TCTGGATCCGGAGGCT--GGGTCTCTGCACAGCTGACATCCCTGCT-GCGGGGGCAGGTAGGCAGCCAGGGTGAGTTTACTTTCAGCCCAAAAAGGGCCTGGCTGCCCAGACGCACAGCCCCGTGGGGGCAGCAGGGGAGGCCCTGGTTTGCCTGC-----AG--ATGGATCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGGTCCAGAGGGCCTGTCCACACACGGGTGAGTCCTTCCCCAAACCTTAGGGGGTCATC-TCCCCACC----TAAGAGGATTTTCCTGAAACAGGA-------------------------------------GGGAAGTCCTGTCAGAGAGTCTCTCATACAATAAGAAGGGGGGACCCTGGGGTGCTCGGCTCACACTTCCGACCTCGTCCTCTCTGGCCTTTCTTACCCTTGGCTGAGTCAAGCTCTGTGAAGACCGGGGTG---AGCTTGGGGTGCTCCAAGCTGAGGTGTGCAGGGA--GGAAGTGGTGTCAGCGACTGAGGAAGGGAGGGAAGCAGTGCTAGGAACAGCAGGTCCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGTGTTTGCATGACGGTCAGGGCTGCAATGTGGCTGCTGTCATTCTACCAGAAGAGGTGGGGAAACCACAGCCATGACCCTGACATTCCAAATCTTCTGATGGGG--------GCTCA-----GTTCATGCACTGGCTGATATTCCATTCACAAAGGACATGCCCTCCATGCCGTGTCTACTTTGTGGTGTTTTACGTGAGTCATCCTGCAGTATTAAAATCTAGTAAGAGTCCCTTATTCAGCACTTGTTCAAAGTTCTCAGCTGACACCTTTGTTGTAGGAAGATGCGGTGTCTATGTGGGATGGGTCCCTCCTGTAGCCCCGGACACCCAGGTGTGGTAGGAGCCT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=6081.000000 s hg38.chr19_GL949747v2_alt 452474 10 + 729520 TAGAAACGAG s panTro4.chr19 59692978 10 + 63644993 TAGAAACAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56592558 10 + 60714840 TAGAAATGTG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47745811 10 + 51301725 TAGAAAGATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47449359 10 + 50890351 TAGAAACATG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 778 - 122678785 T e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10_GL398297_2_random 12334 960 - 21488 I e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=208601.000000 s hg38.chr19_GL949747v2_alt 452484 259 + 729520 GAAAGTGGGGAGAATCTTCTGAGCACTGGCAGGGAGGGGCGGCTCCACATCCTCC----TTTCTAA-GGTGGCGCCTCCTTCTCCCCCAGGTGGTCAGGACAAGCCCTTGCTGTCTGCCTGGCCCAGCGCTGTGGTGCCTCGAGGAGGACATGTGACTCTTCTGTGTCGCTCTCGTCTTGGGTTTAC---------CATCTTCAGTCTGTACAAAGAAGATGGGGTGCCTGTCCCTGAGCTCTACAA--------CAAAATA-TTCTGGAAGAGCATCCTCA s panTro4.chr19 59692988 259 + 63644993 GAAAGTGGGGAGAATCTTCTGAGCACTGGCAGGGAGGGGCGGCTCCACATCCTCC----TCTCTAA-GGTGGCGCCTCCTTCTCCCCCAGGTGGACAGGACAAGCCCTTGCTGTCTGCCTGGCCCAGCCCTGTGGTGCCTCGAGGAGGACATGTGACTCTTCTGTGTCGCTCTCGTCTTGGGTTTAC---------CATCTTCAGTCTGTACAAAGAAGATGGGCTGCCTGTCCCTGAGCTCTACAA--------CAAAATA-TACTGGAAGAGCATCCTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56592568 257 + 60714840 GAAA--TGGGGGAATCTTCTGAGCACAGGGAGGGAGGGGCGGCTTCACATCCTCC----TCTCTAA-GGCGGCGCCTCCTTCTCTCCCAGGTGGACAGGAGAAGCCCTTGCTGTCTGCCTGGCCCAGCGCTGTGGTGCCTCAAGGAGGACATGTGACTCTTCTGTGTCGCTCTCGTCTTGGGTTTAC---------CATCTTCAGTCTGTACAAAGAAGATGGGGTGCCTGTCCCTGAGCTCTACAA--------CAAAATA-TTCTGGAAGAGCATCCTCA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47745821 258 + 51301725 GAAAG-GGGAAGAATCTTCTAAGCACATGGAGGGAGGGGCGACTCCACATCCTCC----TCTCTAA-GGCGGCACCTCCTTCTCCCCCAGGTGGTCAGGACAAACCCTTCTGCTCTGCCTGGCCCAGCGCTGTGGTGCCTCAGGGAGGACACGTGACTCTTTGGTGTCACTATCGTCCTGGGTTTAA---------CATCTTCACGCTGTACAAGGAAGATGGGGTGCCTGTCCCTGAGCTCTACAA--------AAGAATA-TTCTGGAACAGTTTCCTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47449369 267 + 50890351 GAAAG-GGGAAGAATCTTCTGAGCACATGGAGGGAGGGGCGGCTCCACATCCTCC----TCTCTAA-GGCGGCACCTCCTTCTCCCCCAGGTGATCAGGACAAGCCCTTCCTGTCTGCCCAGCCCAGCGCTGTGGTGCCTCAGGGAGGACACGTGACTCTTCGGTGTCACTATCGTCGTGGGTTTAACAACTTTACCAACTTCACTCTGTACAAAGATGACAGAAGCCACGTTCCCATCTTCCCCGG--------CAGAATA-TTCCAGCAGAGCTTCGTCA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102592242 254 + 122678785 GGAGGTGGGGGGAATCTTCCTACCCCC-------ATGGTCAA---CACACTTTCCATGGTCTTTAACACCAGAGCTCTCTTTTCAACCAGGAGTTTATGCTAAGCCCTCACTCTCAGCCCAGCCCAGCCTGGCTGTGTCCCAAGGAGGGGATGTCACTCTACGATGTCAGAGTAAATACAGTTTTGA---------CCAATTCGCTCTGTACAAGGAGGGGGA---------CACTGAGCCCCACAAGCAATCTGCAGAACAGTACTGGGCCAATTTCCCCA i canFam3.chr1 n 778 C 0 e calJac3.chr22 3389202 1795 - 49145316 T e nomLeu3.chr10_GL398297_2_random 12334 960 - 21488 I e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=145043.000000 s hg38.chr19_GL949747v2_alt 452743 116 + 729520 TGGGCCCTGTGACCCCTGCACACGCAGGGACCTACAGATGTCGGGGTTCACACCCACGCTCCCCCATTGAGTGGTCAGCACCCAGCAACCCCCTGGTGATCGTGGTCACAGGTCAG s panTro4.chr19 59693247 116 + 63644993 TGGACCCTGTGACCCCTGCACACGCAGGGACCTACAGATGTCGGGGTTCACACCCGCACTCCCCCATTGAGTGGTCGGCACCCAGCAACCCCCTGGTGATCGTGGTCACAGGTCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56592825 116 + 60714840 TGGGCCCTGTGACCCCAGCACACGCAGGGACCTACAGATGTCGGGGTTCACAACCGCACTCCCCCACTGAGTGGTCCGCACCCAGCAACCCCCTGGTGATCGTGGTCACAGGTCAG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47746079 116 + 51301725 TTAGCCCTGTGACTGCAGCACATGCAGGGACCTACAGATGTCGAGTTTTTCATCCGCACTCCCCCACTGAGTGGTCGGCACCCAGCAACCCCCTGGCGATCATGGTCACAGGTCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47449636 116 + 50890351 TGGGCCCTGTGACCCCGGCACACGCAGGGACCTACAGATGTCGGGGTTCACACCCGCACTCCCCCACTGAGTGGTCGGCACTCAGCGACCCCCTGGCGATCAGGGTCACAGGTCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771606 116 + 49145316 TGGGTCCTGTCACGCCGGCCCAGGCAGGAGCCTACAGATGCTGTGGTTCTTTCAGTCACTCCCGCTATGAGTGCTCGGCTCCCAGCGACCCCCTGGAGATTGTGATCACAGGTGAG i calJac3.chr22 T 22013 I 638 s canFam3.chr1 102592496 116 + 122678785 TCACCGCAGTGACTGTTGCCCACAGTGGGATCTACCGATGCTATAGCTTTTCCAGCAAGTTCCCGTACCTGTGGTCAGCCCCCAGCGACCCCCTGGAGCTTGTGGTAACAGGTGAG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10_GL398297_2_random 12334 960 - 21488 I e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=55195.000000 s hg38.chr19_GL949747v2_alt 452859 62 + 729520 AGGACTCATGTCTGGGCTTCTCCTTCTCCCACTTCCTGAATCCCAGAGCATCTGGTGGGGGT s panTro4.chr19 59693363 62 + 63644993 AGGACTCGTGTCTGGGCTTCTCCTTGTCCCACTTCCTGAATACCAGAGCTTCTGGTGGGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56592941 62 + 60714840 AGGGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAGTCCGAGAGCTTCTGGTGGGGGT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47746195 62 + 51301725 AGGGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47449752 62 + 50890351 AGGGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGCTGAGGGT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102592612 53 + 122678785 GGAGATGCAGTCCAAGCCTTTCTTCTT--CAGCTCTTGCATAC-------TCTGGTGGAAGT i canFam3.chr1 C 0 n 0 e calJac3.chr22 45771722 638 + 49145316 I e nomLeu3.chr10_GL398297_2_random 12334 960 - 21488 I e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=399937.000000 s hg38.chr19_GL949747v2_alt 452921 516 + 729520 GTCCACCAGGGTCCAATCATCCAGGCCCTGACTGTATTTGGTGTCAATGGGGATTGAATACAGGGGAATGGGTGCTGTGGTGGAAAGAGTAACTGTCGGCAGC-atggctatattgtaatccttggagcctgtgactatttatgttataggacatgggactgaaggggaagatggagttcaggttgttgatgagttgaccttgagatggggagacgacctggactctcccactgggctcagtgtaatcacaagggtccacatgagaggaggaggaagaggagagtggggattagagcagcgtagtgggagggagagtccaccagccactgcgggctttgaaagtggaggaaggccagaagccacggaatgcaggtggcctttaggggctggagaagtcaatggaactga--ttctcccgagtctccagagggaatgcagccctgcagatgccttgattgtagcccaggaagaacagggtctgatttctg-tcaacagaa---------------gtgtTCTCTCCCGCCGCCGTG s panTro4.chr19 59693425 516 + 63644993 GTCCACCAGGGTCCAATCATCCAGGCCCTGACTGTATTTGGTGTCAATggggattgaatacaggggaatgggtgctgtggtgggaagagtaactgtcggcagc-atggctatattgtaatccttggagcctgtgactatttatgttataggacaggggactgaaggggaagatggagttcaggttgttgatgagttgaccttgagatggggagatgacctggactctcccactgggctcagtgtaatcacaagggtccacgtgagaggaggaggaagaggagagtggggattagagcagcgtagtgggagggagactccaccagccactgtgggctttgaaagtggaggaaggccagaagccacggaatgcaggtggcttttaggggctggagaagtcaatagaactga--ttctcccgagtctccagagggaatgcagccctgcagatgccttgattgtagcccaggaagaacagggtctgatttctg-tctccagaa---------------gtgttctctcctgccgccatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56593003 527 + 60714840 GTCCACCAGGGTCCGATCATCCAGGCCCTGACTGTATTTGGGGTcaagggggattgaatacaggggaatgggtgctgtggtgggaagaataactgtcctcagt-atggctatattgtaatccttggagcctgtgactatttgtgttataggacaggggactgaaggggaagatggagctcaggttgttgatgagttgaccttgagatggggagatggcctggactgtcctactgggctcagtgtaatcacaagggtccacatgagaggaggaggaagaggggagtggggattagagcagcgtcgt----gggagactccatcagccactgcgggctttgaaagtggaggaaggccagaagccacggaatgcaggtggcctttaggggctggagaagtcaagggaactga--ttctcccgagtctccagagggaatgcagccctgcagatgccttgattgtagcccaggaagaacagggtctgatttctg-tctccagaagtggaaggggtcagtgtgttctctcctgctgacatg i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47746257 530 + 51301725 GTCCACCAGGGTCCCATCATCCAGGCCCTGACTGTATTTGGGGTAAAGGGGGATTGAATACATGGAAATGGGTGCTGTGGTGGGAAGAATAACTGTCCCCACTGATGGCCACATTGTAATCCGTGGACCCTGTGACTCTTTATGTTATAGGGCGGGGGACTGAAGGGGAAGATGGAGCTCAGGTTCTTGATGAGTtgaccttgagatggggagatggcCTGGACTGTCCCGCTGGGCTCAGTGGAATCACAAGGGTCCTCAtgacaggaggaggaagaggggagtgGGGATTACAGCAGCATCAT----GGGAGACTCCATCAGCCACTGTgggctttgaaggtggaggaaggtcACGAGTCAC-AAAGGCAGGAGGCCTATAGGGGCTGGAGAAGTCAAGGGAACTGATTCTCCCCTGAGTCTCCAGAGGGAACACAGCCCTGTAGAtgccttgattttagctcagGAAGAACTGGATCCAATTTCTGTTCTCCAGAAGTGGAAGGGGTCAGTGtgttctctcctgctgccatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47449814 525 + 50890351 GTCCACAAGGGTCCCATCACCCAGGACCTGACTGTCTTTGGGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCtgtgatgggaagaataactgtccccaat-atggttacattctaatccctggagcctgtgactctttatgctatagggcaggggactgaaggggaaganggagctcaggttgttgatgagttgaccttgagatggggagacggcctggactgtcccactgggctcagtggaatcacaaggcaccaaacgagaagaggaggaggaggagagtggggattagagcagcgttgt----gggagagtccatcagccactgtgggctttgaaggtggaggaaggccacgagccac-aatggcaggtggcctctacgggctggagaagtcaagagaaccg---ctctgttgagtctccagagggaacacagttctgtagatgacttgattttagcccaggaagaactggatccaatttctg-tctccagaagtggaaggggtcagtgtgttctctcctgctgccatg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102592665 0 + 122678785 I e calJac3.chr22 45771722 638 + 49145316 I e nomLeu3.chr10_GL398297_2_random 12334 960 - 21488 I e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=88409.000000 s hg38.chr19_GL949747v2_alt 453437 75 + 729520 TTTGTGATAATTTTCTGCAGCAACAACAGGAAA-CAACACAGGAATCCAGGTCAAGGACAAGTTAAAAAACCAAAC s panTro4.chr19 59693941 75 + 63644993 tttgtgataattttctgcagcaacaacaggaaa-caacacaggaatccaggtcaaggacaagttaaaaaaccaaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56593530 76 + 60714840 tttgtgataattttctccagcaacaacaggaaaccaacacaggaacccaggtcaaggacaagttaaaaaaccaaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 13294 76 - 21488 cttctgataattttctacagcagcaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGTTAAGAAACGACAC i nomLeu3.chr10_GL398297_2_random I 960 C 0 s papAnu2.chr19 47746787 76 + 51301725 tttGTGATGATTTtctacagcagcaacaggaaaccaacacaggaacCCAGGTCAAGGACaagtttaaaaaccaaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47450339 75 + 50890351 tttgtgataattttctgccgcagcaacaggaaaccaacacaGGAA-CCAGGTCAAGGACAAGTtaagaaaccaaac i chlSab2.chr6 C 0 I 2493 e canFam3.chr1 102592665 0 + 122678785 I e calJac3.chr22 45771722 638 + 49145316 I e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=2820.000000 s hg38.chr19_GL949747v2_alt 453512 3 + 729520 AAG s panTro4.chr19 59694016 3 + 63644993 aag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56593606 3 + 60714840 aag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 13370 3 - 21488 AAG i nomLeu3.chr10_GL398297_2_random C 0 I 2476 s papAnu2.chr19 47746863 3 + 51301725 aag i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102592665 0 + 122678785 I e calJac3.chr22 45771722 638 + 49145316 I e chlSab2.chr6 47450414 2493 + 50890351 I e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=17443.000000 s hg38.chr19_GL949747v2_alt 453515 36 + 729520 AGGGTTGGCTACCCTAAGGTCAGCAAGGGTGCACTG s panTro4.chr19 59694019 36 + 63644993 agggttggctaccctgaggtcagcaagggtgcactg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56593609 36 + 60714840 aaggttggctaccgtgagatcagcgagggtgcactg i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47746866 36 + 51301725 agGGTTGGCTACCCCGAGATCAGCAACGGTGCACTG i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102592665 0 + 122678785 I e calJac3.chr22 45771722 638 + 49145316 I e nomLeu3.chr10_GL398297_2_random 13373 2476 - 21488 I e chlSab2.chr6 47450414 2493 + 50890351 I e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=22052.000000 s hg38.chr19_GL949747v2_alt 453551 40 + 729520 CTGATGCCACCACCAGGCTGGAGCCGC--------ATAGGGAGGGATC s panTro4.chr19 59694055 40 + 63644993 ctgatgccaccaccaggctggagccgc--------atagggaggGATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56593645 40 + 60714840 ttgatgccaccaccaggctggaaccac--------acagggaggGATC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47746902 40 + 51301725 CTGATGCCACCACCAGGCTGGAGCCAC--------ATAGGGAGGGAAT i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19893756 48 - 122678785 CTGAGGGGAACCCCAGGTAGTGGCCGCCAGGACCAAGGGTGTGGGGTC i canFam3.chr1 T 778 C 0 e calJac3.chr22 45771722 638 + 49145316 I e nomLeu3.chr10_GL398297_2_random 13373 2476 - 21488 I e chlSab2.chr6 47450414 2493 + 50890351 I e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=15798.000000 s hg38.chr19_GL949747v2_alt 453591 35 + 729520 CACAGGGAGAGTCGGGGGTGGAGGGT--GAGAGAGAG s panTro4.chr19 59694095 37 + 63644993 CACAGGGAGAGTTGGGGGTGGAGGGTGAGAGAGAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56593685 35 + 60714840 GACAGGCAGAGTCGGGGGTGAAGGGT--GAGAGAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 15849 31 - 21488 CACGAAGAGAGATGGGGGTGGAGGGT------GAGAG i nomLeu3.chr10_GL398297_2_random I 2476 C 0 s papAnu2.chr19 47746942 29 + 51301725 GACAGGGAGAGTcgggggtggagggt------gag-- i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19893804 17 - 122678785 CACAGGGAGGGAGAGAG-------------------- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45771722 638 + 49145316 I e chlSab2.chr6 47450414 2493 + 50890351 I e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=103651.000000 s hg38.chr19_GL949747v2_alt 453626 84 + 729520 AGAGAGCATTAGGTCATAGAGCAGGGGAGTGAGTTCTCAG----------CTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG s panTro4.chr19 59694132 84 + 63644993 AGAGAGCATTAGGTCATAGAGCAGGGGAGTGAGTTCTCAG----------CTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTCAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56593720 84 + 60714840 AGAGAGCACTAGGCCATAGAGCAGGGAAGTGAGTTCTCAG----------CTCAGGTGTGAGGGGAGCTGTGAGAAGGAAGAACCTCCCTGAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 15880 82 - 21488 AGAGAGCATTACGTCATAGAGCAGGGGAGTGAGTTCTCAG----------CTCAG--GTGAAGGCAGCTGTGACAAGGAAGAACCTCCCTGAGG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47746971 84 + 51301725 agagagcattaggTCATAGAGCAGGGGAGTGAGTTCTCAG----------CTCAGGTGTGAGGGAAGCTGTGACAAGGAAGAACCTCCCTGAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47452907 83 + 50890351 AGAGAGCATTAGGTCATAGAGCAGGGGAGTGAGTTCTCAG----------CTCAGGTGTGAAGGGA-CTGTGACAAGGAAGAACCTCCCTGAAG i chlSab2.chr6 I 2493 C 0 s canFam3.chr1 19893821 75 - 122678785 ACAGAGAAACCGGGGATAAAG-ATGGGAGAGA---CTCAGAGGACACAGACTCAGGT-----------CAAGACAAGGCTGGACCAACCC---- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45771722 638 + 49145316 I e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=572519.000000 s hg38.chr19_GL949747v2_alt 453710 360 + 729520 -AAACTGCCTCTT---CTTCCAGGT---CTATTTGGGAAACCTTCACTCTCAGCCCAGCCGGGCCCCACGGTTCGCACAGGAGAGAACGTGACCTTGTCCTGCAGCTCCAGGAGCTCATTTGACATGTACCATCTATCCAGGGAGGGGAGGGCCCATGAACCTAGGCTCCCT-----GCAGTGCCCAGCGTCAATGGAACATTCCAGGCTGACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACACATGCTTCGGCTCTCTCCATGACTCACCCTATGAGTGGTCAGACCCGAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAAAGCCCATGCCTGTC----CCATGTCCTG----T---------GATCCTAGAGCCTT s panTro4.chr19 59694216 363 + 63644993 -AAACTGCCTCTTCTCCTTCCAGGT---CTATTTGGGAAACCTTCGCTCTCAGCCCAGCCGGGCCCCACGGTTCGCGCAGGAGAGAACGTGACCTTGTCCTGCAGCTCCAGGAGCTCATTTGACATGTACCATCTATCCAGGGAGGGGAGGGTCCATGAACCTAGGCTCCCT-----GCAGTGCCCAGCATCAATGGAACATTCCAGGCTGACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACACATGCTTTGGCTCTTTCCATGACTCACCCTATGAGTGGTCAGACCCGAGTCACCCACTGCTTGTTTCTGTCACAGGTGAGGAAAGCCCATGCCTGTC----CCATGTCCTA----T---------GATCCCAGAGCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56593804 363 + 60714840 -AAACTGCCTCTTCTCCTTCCAGGT---CTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCAGGCAGGAGAGAACATGACCTTGTCCTGCAGCTCCCGCAGCTCGTTTGACATTTACCATCTATCCAGGGAGGGGGAGGCCCATGAACTTAGGCTCCCT-----GCAGTGCCCAAAGTCAATGGAACATCCCAGGCCGACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTCTCCGTGACTCTCCCTATGAGTGGTCAGACCCGAGTGACCCACTGCCCGTTTCTGTCACAGGTGAGAGAACACCATGCCTATC----CCATGTCTTA----T---------GATCCTAGAGCCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 15962 362 - 21488 -AAACTGCCTCTTCTCCTTCCAGGT---CTATATGGGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCAGGCAGGAGAGAATGTGACCTTGTCCTGCAGCTCCAGGAGCTCCTATGACGTGTACCATCTATCCAGAGAGGAGGGGGGCCATGAACGTAGGCTCTCT-----GCAGTGCCCAAGGTCAACGGAACATTCCAGGCAGACTTTCCTCTGGGCCCTGCCA------CTCACGGAGAGGCCTACAAATGCTTCGGCTCTTTCCGTGACTCTCCCTACGAGTGGTCAGACCCAAGTGACCCACTGCTTATTTCTGTCACAGGTGAG-CAACCCCATATCTGTC----CCATGTCCTA----C---------GATCCTAGAGCCTT i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47747055 363 + 51301725 -AAACTGCCTCTTCTCCTTCCAGGT---CTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCCCACAGGAGAGAACATGACCTTGTCCTGCAGTTCCCGGCACTCCTTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCCATGAACTTAGGCTCCCT-----GCAGTGCCAAGCGTCAATGGAACATTCCAGGCTGACTTCCCTCTGGGCCCTGCCA------CCCATGGAGGGAACTACAGATGCTTCGGCTCTCTCCGTGACTCTCCCTATGAGTGGTCAGACCCGAGTGACCCACTGCCTGTTTCtgtcacaggtgaggaaaccccATGCCTGTC----CCATGTCTTA----T---------GATCCCAGAGCCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47452990 363 + 50890351 -AAACTGCCTCTTCTCCTTCCAGGT---CTATATGACAAACCTTCTCTCTCAGCCCAGCCAGGCCCCACAGTTCAGGCAGGAGAGAACGTGACCTTGTCCTGCAGCTCCCAGACCTTGTTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCCGTGACCTTAGGCTCCCT-----GCAGTGCCAAACATCAATGGAACATTCCAGGCCGACTTCTCTCTGGGCCCTGCCA------CCAACGGAGGAACCTACAGATGCTTTGGTTCTTTCCATATCGCACCCTACGAGTGGTCAGACCCGAGTGACCCACTGCCCGTTTCTGTCACAGGTGAGGAAACGCCATGCCTGTC----CCATGTCTTA----T---------GATCCCAGAGCCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772360 376 + 49145316 -AATCAGCCTCTTTTCCTCCCAGGA---AAACACAAAAAGCCTTCTCTCTCCACCCAGGAGGACCCCAGGATGGGGAGTGGAGAGAACGTGACGTTATTCTGCATCTCTGAAATCTCATTTGACCGGTACCATCTGTGGAGAGAGGGGGCTCCTTATGGCCAGTGGCTCAGT-----GGAGGTCAGGGACACAGGGGAGCATTCCAGGCCAACTTTTCTGTGGGCCTCGCAACGCCAGCCCATGGAGGGACCTATAGATGCTACGGTTCTTTCAATGCCTCCCCCTATGAGTGGTCGGCCCCCAGTGAGCCCCTGCACCTTTCTGTCACAGGTGAGG--AGCCCACACCTGCC----ACCTGTCCTG----TTGTCCACTAAGTCCCAGAGCCAT i calJac3.chr22 I 638 C 0 s canFam3.chr1 19893896 381 - 122678785 TTACCTACCCTTCCTCTCTCTAGGACAGCTCTCCTATACACCCTCCTTACGGGTGCATCCAGGACCCACGGTGGCCCCAGGAGAGAATGTGACCCTGCTGTGTCAGTCACTGAGCAATGTGGACACATTCCTTCTGTCCAAGGATGGGGCAGCTGATGCCTCCTTGCGTCTTAGATCGAAGTACCGAGC-----TGGGAAGTACGAGGCTGAATTCTCCATGAGTCCTGTGACCCCAGCCCATGGGGGGACCTACAGGTGCTACGGCTCTATCAAAACCTCTCCCTACCTGTTGTCATACCCCAGTGTCCCCGTGGAGATCCTGGTCTCAGGTGAGTAGCCCTTGCCCCTGTCCCCTCCATGTGCTAACATT---------GTTCTCAGGGCCCT i canFam3.chr1 C 0 N 0 e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=26073.000000 s hg38.chr19_GL949747v2_alt 454070 24 + 729520 AGCTGAGGAGCTTCCTGCTGATGA------------------------ s panTro4.chr19 59694579 24 + 63644993 AGCTGAGGAGCTTCCTGCTGATGA------------------------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594167 24 + 60714840 AGCTGAGGAGCTTCCTGCTGATGA------------------------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 16324 24 - 21488 AGCTGAGGAGCTTCCTGCTGATGA------------------------ i nomLeu3.chr10_GL398297_2_random C 0 I 3529 s papAnu2.chr19 47747418 24 + 51301725 AGCTGGGGAGCTTCCTGCTGATGA------------------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47453353 23 + 50890351 AG-TGAGGAACTTGCTGCTGATGA------------------------ i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772736 48 + 49145316 ACCAGAGGGGCATCCCACTGGGCACACAGGGGCATTAGGTATTCTGGA i calJac3.chr22 C 0 C 0 e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=24807.000000 s hg38.chr19_GL949747v2_alt 454094 26 + 729520 TGGAGAGAAGCATGGACAGATGCAGA s panTro4.chr19 59694603 26 + 63644993 TGGAGAGAAGCATGGACAGATGCAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594191 26 + 60714840 TGGAGAGAAGCATGGACAGATGCCGA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47747442 26 + 51301725 TGGAGAGAGGGATGGACAGATGCAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47453376 26 + 50890351 TGGAGAGAAGCATGGACAGGTTCAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772784 26 + 49145316 CAAAATGAAGCAGTGAAAAATACAGA i calJac3.chr22 C 0 C 0 e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=218283.000000 s hg38.chr19_GL949747v2_alt 454120 256 + 729520 GA-GAACACGCAGCAT-GGTGTGAGGGAGGGATCAGGGCACAGGATGGCAGACAGGGCACCTCCAAACCCTCCTGCACGGCCTGCATGGAGGCCC-GCGGCCAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGTGGTCAGGACAGACCCAG--AGGAGGGAGACTCGGCTCAGTTTGGGGAGATCAGAGGCTCCCTCAGACCCTAAACCTTACCCA-TTTCCCAGAAGCCCATACTGGCCTCTCACCCACAC--AGAGATGTC s panTro4.chr19 59694629 256 + 63644993 GA-GAACACGCAGCAT-GGTGTGAGGGAGGGATCAGGGCACAGGATGGCAGACAGGGCACCTCCAAACCCTCCTGCACGGCCTGCATGGAGGCCC-GTGGCCAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGAGGTCAGGACAGACCCAG--AGGAGGGAGACTCGGCTCAATTTGGGGAGATCAGAGGCTCCCTCAGACCCTCAACCTTACCCA-TTTCCCAGAAGCCCATACTGGCCTCTCACCCACAG--AGAGATGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594217 259 + 60714840 GA-GAAGACGAAGCCTGGGTGTGAGGCCAGGGTCAGGGCACAGGATGGCAGACACGGCACCTCGAAACCCTCCTTCATGGCCTGCATGGAGGCCC-GCGGCCAGGGCTCCAGGCACACAGGCAGATGGAGAAAGCGATCAGGACAGACCCAG--AGAAGGGAGACTGGGCTCAGTTTGGGGAGATCAAAGGTTCCCTCAGCCCCTCAACCTTACCCG-TTTCCCAGCAGCCCATACTGGCCTCTCACCCACACAAAGAGATGTC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47747468 256 + 51301725 GA-GAAGGCGAAGCCTCGGTGTGAGGTTGGGGTCAGGGCACAGGAGGGCAGACACAGCACAT-CAAACCCTCCCGCACTGCCTGCATGGAGGCCT-GCGGTCAGGGCTCCAGGCACCCaggcagatggagaaactggTCAGGACAGACCCAG--AGGGGGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAACCCATCCTGGCCTCTCACCCACAC--AGAGATAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47453402 257 + 50890351 GA-GAAGACCAAGCCTCAGTGTGAGGGCAGGATCAGGACGCAGGATGGCAGAGAGGGCACCTCCAAACCCTCCTGCATGGCCTGTGTGGTGGTCC-GCGGTCAGGGCTCCAGGCCCCCAGGCAGATGGAGAAACTGGTCAGGACAGACCCAG--AGGAGGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCTGAAGCCCATCCTGGCCTCTCACCCACAC--AGACATATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772810 220 + 49145316 CAGGGATGAACAGGCTGAGTGGGATGGGGCTGTCAGGGTGCAGGGC-ATAGACAGGGCAGCTCTGCGCCCTCC------------------GCCC-----------CTCC-----------TACATGAAGAAAGAGGTCAGGGCAAACACAGGTGGAGGTGAGGCCAGATGGAGTTTGTTGAGATCAGAGGTTGCCTCAGCCCCTCGCCCTTTTCCATTTTCTCCGAAGCCCCTCCTGACCCCTCA-CCACAG--AGAGATTTC i calJac3.chr22 C 0 I 49419 s canFam3.chr1 19679184 210 - 122678785 GA-GATCATCCAG-----------AGGGGACCTCAGCTCTCAGGGGGATAGTCAGGACAACACCATCCCTGACTTCTCCCCTTCCCTTGAGGCCCTGTAGTGA-----CAGGGGAGTGATGTAGACTG-GAGAGGACTCAGGGCTGAC------AGAAGGGAA----------------GAAGGCCAGAGGCCCTTCCCG---CTCATTCTCCTCCA-GTCTCCAG----TCCTAGGAGCCGCTCCTCC------GGAGACACC i canFam3.chr1 N 0 C 0 e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=9735.000000 s hg38.chr19_GL949747v2_alt 454376 8 + 729520 ATCACCAG s panTro4.chr19 59694885 8 + 63644993 ATCACCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594476 8 + 60714840 ATCACCAG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47747724 8 + 51301725 ATCACTAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47453659 8 + 50890351 ATCACCAG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19679394 8 - 122678785 AACACCAG i canFam3.chr1 C 0 N 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=77664.000000 s hg38.chr19_GL949747v2_alt 454384 112 + 729520 CAACCCCTACACCCTTTTCTTTCCGTTTGAAAAAACATTTATTTAGGTTAAATGTAACTATATAATTTGCCACCTTTACCATTTTTAAAAGTAAAATCTAGTGGTCATAAAT s panTro4.chr19 59694893 112 + 63644993 CAACCCCTACACCCTTTTCTTTCCGTTTGAAAAAACAtttattgaggttaaatgtaactatataatttgccacctttaccatttttaaaagtaaaatctagtggtcataaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594484 112 + 60714840 CAACCCCTACGCCCTTTTCTTTCCGTCTGAAAAAACAtttattgaggttaaatgtaactatataatttaccacctttaccatttttaaaagtaaaatctagtggtcataaat i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47747732 101 + 51301725 CAACCCTTACACCCTTTTCTTTTCAATTGAAAAAATGCTGATTGAGGTTAAGTATACCTGTATAATTTACCAAcgttaccatttttaagtgtaaaatctag----------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47453667 112 + 50890351 CAACCCTTGCACCTTTTTCTTTTCATTTGAAAAAATATTTGttgaggttaaatatacctataaaattgaccatctttaccgttcttaagtgtaaagtctagtggtcataaat i chlSab2.chr6 C 0 I 19762 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=4284.000000 s hg38.chr19_GL949747v2_alt 454496 10 + 729520 TCCTTTATAT s panTro4.chr19 59695005 10 + 63644993 acctttataT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594596 10 + 60714840 acctttataT i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47473541 10 + 50890351 acatttatat i chlSab2.chr6 I 19762 T 94268 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e papAnu2.chr19 47747833 0 + 51301725 C e macFas5.chr19 55654365 27177 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=306119.000000 s hg38.chr19_GL949747v2_alt 454506 297 + 729520 gcagggtgcagtggctcacagttataatctcggtgctttgagaggccaaggaaggtggatcatttaagatcagaggctcgagatcagcctggccaacatgagggaaattcatctttactaaacagacaaga--------------------------aaaattggctgggcatgctggcatgcacctgtattcctagctacatgggaggctgaggcaggagaagtacgtaagcccaggaggcagaggttgcactgagctgagatcaggccactgcactgcagcctgggagacagagagagattctgtctctaaataaataaaT s panTro4.chr19 59695015 297 + 63644993 gctgggtgcagtggctcacagttgtaatctcggcgctttgagaggccaaggaaggtggatcatttaagatcaggggctcgagatcagcctggccaacatgtgggaaattcatctttactaaacagacaaga--------------------------aaaattggccgggcatgctggcatgcacctgtattcctagctacatgggaggctgaggcaggagaagtacttaagcccaggaggcagaggttgcactgagccgagatcaggccactgcactgcagcctgggagacagagagagattctgtctctaaataaataaaT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594606 297 + 60714840 gctgggtgcagtggctcatggttttaatcttggcgctttgagaggccaaggaaggcggatcatttaagatcaggggctcaagatcagcctggccaacatgtgggaaattcatctttactaaacagacaaga--------------------------aaaattggccaggcatgctggcctgcacctgtagtcctagctacatgggaggttgaggcaggagaagcacttaagcccaggagacagaggttgcactgagccgagatcatgccactgcactgcagcctgggagacagagagagactctgtctctaaataaataaaT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55627188 305 + 59248254 gccgggcacggtggctcacggttgtaatcccaacactttgagaggccaaggcaggtggatcatttgagatcagggactcaagaccaccctggccaacgtggggaaaatccatctgtactaaaaatacaaaa------------------taataataataattagccgagcatggtggcacatgcctgtagtcccaactacttgggagggttaggcaggagatgcacttagttgcaggaggcacaggttgcagtgagccgagatcatgccactgcactgcagcctgggagacagacagagacactctctcaaaaTTAATTAAT i macFas5.chr19 T 27177 C 0 s papAnu2.chr19 47747833 297 + 51301725 gccgggtgcagtggctcacgcttgtaatctcagcaatttgagaggccaaggcaggtagatcattcaAAATCAGGGgctggagacaagcctggccaacatgggggaaacccatttttactaaaaagatgaaa-------------------------aaaaattaaccaggcatagtaccacatgcctgtaatcccagctacttgggaggctgaggtaggagaaccgcttaagcccaggaggcagaggttgcagtgagccgagatcatgccactgcactgcagcctggt-gacacacagagactctgtctctaaatagataaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47379283 323 + 50890351 gccgggcactgtgactcacggttgtaatcccaacactttgagaggctaaggcaggtggatcttttgagatcagggactcaagaccaccctggccaacgtggggaaaatccatctgtactaaaaatacaaaataataataataataataataataataataattagccgagcgtggtggcacatgcctgtagtctcagctacttggaagggttaggcaggagatgcacttagttgcaggaggcagaggttgcagtgagccaagatcatgccactgcactagagcctgggagacagagagagacactctctcaaaaTTAATTAAT i chlSab2.chr6 T 94268 I 14 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=1859.000000 s hg38.chr19_GL949747v2_alt 454803 7 + 729520 ACATCTA s panTro4.chr19 59695312 7 + 63644993 ACATCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594903 7 + 60714840 ACATCTA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55627493 7 + 59248254 TAATTAA i macFas5.chr19 C 0 I 978 s papAnu2.chr19 47748130 7 + 51301725 aaataaa i papAnu2.chr19 C 0 I 4 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e chlSab2.chr6 47379606 14 + 50890351 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=3978.000000 s hg38.chr19_GL949747v2_alt 454810 21 + 729520 TATTCTTTTTTATTGTTGTTG s panTro4.chr19 59695319 21 + 63644993 TATTCTTTTTTATTGTTGTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594910 19 + 60714840 TATTC--TTTTGTTATTGTTG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47748141 14 + 51301725 tattc--tttttttgg----- i papAnu2.chr19 I 4 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e chlSab2.chr6 47379606 14 + 50890351 I e macFas5.chr19 55627500 978 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=279267.000000 s hg38.chr19_GL949747v2_alt 454831 355 + 729520 TTACActccaccctttacttcctgccctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgtatatgggtgagaaatgggaatctttgcaatgacctccagttccatccatgtggctgcaaatgtcaggatgttattctttctacggatgagtactctccac--tgtgtgtgtgtactacattctctctatccattcacccactgacgggcaggtaagttgactccacatcttggctactgtgaacagtgctgcaccaatcgtatgagtgcagatatcacttcgatacactgatgtccttccctttgggtttacacccagtagtggaattgctaga s panTro4.chr19 59695340 357 + 63644993 TTACActccaccctttacttcctggcctctggtagccaccattctactctccaccttcatgagatccaccttttagctcctgtatacaggtgagaaatgggaatctttgcaatgacctccagttccatccatgtggctgcaaatgtcaggatgttattctttctagggatgagtactctccactgtgtgtgtgtgtactacattctctctatccattcacccactgacgggcaggtaagttgactccacatcttggctactgtgaacagtgctgcaccaatcatacgagtgcagatatcacttcgatacactgatgtccttccctttgggtttacacccagtagtggaattgctaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594929 355 + 60714840 TTACGctccgcccttcccttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgtatacaggtgagaaatgggaatctttgcaatgacctccagttccatccatatggctgcaaatgacaggaggttgttgtttctatggatgagtagtctccac--tgtgtgtatgtactacattctctctatccattcacccactgacgggcaggtaagttgactccacatcttggctactgtgaacagtgccgcaacaatcacacaagtgcagatatcacttcgatatattgatttacttccctttgggtttacacccagtagtggaattgctaga i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47748155 355 + 51301725 tTACCCTCCATCCTTTCCTTCCTAACCTCTGGCatccaccattctactctctaccttcatGAGCTTCACATTTTACATCCTGCAGGTTAGTGAGAAATGGCATTCCttgtaatgacctccagttccacccatgtggCTGCAAATGTCAGGATGTTATTGTCTCTCTGGATGAGTAGTCTCCAC--TGTGTGTATGTACTACATTCTCtctatccattcacccactgatgGGCAGGTAGGTTGACTCCACATCTTGACTACTGTGAATGGTGCTAGAACAgtcatgggagtgcagatgtcaCTTTGATACACTGAAGTCCTTTCCTTTGCGTTTACACCCActagtggaattgctaga i papAnu2.chr19 C 0 I 395 s chlSab2.chr6 47379620 355 + 50890351 TTAccctccacgcttcccttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgcatatgagtgagaaatggaaatacttgtaatgacctccagttccatccatgtggctgcaaatgtcaggatgttattgtctctatggatgagtagtctccac--tgtgtgtatgtactacattctctctatccagtcatccactgaggggcaggtaggttgtctccacatcttggctactgtgaactgtgctagaacaatcatgggagtgcagatgtcacttcaatacactgaagtcctttccttttggtttacacccagtcgtggaattgctaga i chlSab2.chr6 I 14 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e macFas5.chr19 55627500 978 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=3820.000000 s hg38.chr19_GL949747v2_alt 455186 4 + 729520 tcct s panTro4.chr19 59695697 4 + 63644993 tcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56595284 4 + 60714840 tcct i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47748905 4 + 51301725 tcct i papAnu2.chr19 I 395 C 0 s chlSab2.chr6 47379975 4 + 50890351 tcct i chlSab2.chr6 C 0 I 602 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e macFas5.chr19 55627500 978 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=8367.000000 s hg38.chr19_GL949747v2_alt 455190 17 + 729520 atcaacagggtaccagg s panTro4.chr19 59695701 17 + 63644993 atcaacagggtaccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56595288 17 + 60714840 atcaacagggtaccagg i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47748909 17 + 51301725 gtcAACAGTGTATCAGG i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e chlSab2.chr6 47379979 602 + 50890351 I e macFas5.chr19 55627500 978 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=1422.000000 s hg38.chr19_GL949747v2_alt 455207 2 + 729520 gt s panTro4.chr19 59695718 2 + 63644993 gt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56595305 2 + 60714840 gt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55628478 2 + 59248254 gc i macFas5.chr19 I 978 C 0 s papAnu2.chr19 47748926 2 + 51301725 GT i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e chlSab2.chr6 47379979 602 + 50890351 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=691115.000000 s hg38.chr19_GL949747v2_alt 455209 668 + 729520 tctcctttctctaccaccttgccagcatttattttgtctgtgtttcagat-aaaagccactttaatgggatgagatgatagctcactgtgatttcaattggca---------tgattag-tgatactgagcactttttcatgtacatgttcgccatttgtacgttttgtttgttgagaaatgtctgttcaggtcttttactaattgttaaattaaattcattgttttataccgttgcttgagttttatgtatattctagttattaatcccctctcagatgcatacttcacaaat----------attttctcccaatttgtctcttcttcactttgttggttgcttcctttgcggtgcagaagctgcttactttgatgtaatcccgaaggtcta--ttattttgttttgatttcttgtgtttttgagatttcaaataaaatgtctttcctcagacaaatgtcctggagcatttccccactctttccttttagacgcttaatggtttcaggccttaagtgtttcttccattttcatttga-tttctgtgtatggtgagaggtagaggtgcagtttcatcaa-ctgcatgtagatac-cagttttccctgctccatttattgaaaagaccgtcgtttcctgattgcaggttcttggcacgtacaatcgtcaaagtccattggatgtgaatgcatga s panTro4.chr19 59695720 668 + 63644993 tctcctttctctaccaccttgccagcatttattttgtctgtgtttcagat-aaaagccactttaatgggatgagatgatagctcactgtgatttcaattggca---------tgattag-tgatactgagcactttttcatgtacatgttcgccatttgtacgttttgtttgttgagaaatgtctgttcaggtcttttactaattgttaaattaaattcattgttttataccgttgcttgagttttatgtatattctagttattaatcccctctcagatgcatacttcgcaaat----------attttctcccaatttgtctcttcttcactttgttggttgcttcctttgcggtgcagaagctgcttactttgatgtaatcccgaaggtcta--ttattttgttttgatttcttgtgtttttgagatttcaaataaaatgtctttcctcagacaaatgtcctggagcatttccccactctttccttttagacacttaatggtttcaggccttacgtgtttcttccattttcatttga-tttctgtgtatggtgagaggtagaggtgcagtttcatcaa-ctgcatgtagatac-cagttttccctgctccatttattgaaaagaccgtcgtttcctgattgcaggttcttggcacctacaatcgtcaaagtccattggatgtgaatgcatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56595307 669 + 60714840 tctcctttctctaccaccttgccagcatttattttgtctgtgtttcagat-aaaagccactttaatggggtgagaagatagctcactgtgatttcaattggca---------tgattag-tgatactgagcactttttcatgtacatgttggccatttgtacgttttgtttgttgagaaatgtctgttcaggtattttgctaattgtcaaattaagttcgttgttttataccgttgcttgagttttatgtatattctagttattaatcccctctcagatgcatacttcacaaat----------attttctcccaatttgtctcttcttcactttgttggttgcttcttttgcggtgcagaagctgcttactttgatgtaatcccaaaggtcta--ttattttgttttgatttcttgtgtttttgagattttaaataaaatgtctttcctcagacaaatgtcctggagcattttcccactctttccttttagatgcttaatggtttcaggccttaagtgtttcttccattttcattttattttttgtgtatggtgagaggtagaggtgcagtttcatcaa-ctgcatgtagatac-cagttttccctgctccatttattgaaaagactgtagtttcctgattgcaggttcttggcacctacaatcatcaaagtccactggatgtgaatgcgtgg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55628480 668 + 59248254 tctcctttctctaccaccttaccagcatttgttttgtctgtctttctgataaaaagccattgtaatggggtgagatgatagctcactgtgaattcagttcacatttctctgatgattagttgatactgagcattttttcatatacacaatatccatttgcatgttttgttcgttgagaaatgtctgttcagatctttcattaattttataattaaattatttgttttattgaggtgtttgagcttctcatatattctagttgctaatcccctc-caggtgcatactttgcaaat----------attctgt---gggttgtc---tcttcactttgttggttgcttcttttgcggtgcagaagctgcttagtttgatgtaatcccaatcgtcta----tttttgttttgattgtttgtgtttttgagattttaaacaaaatgtctttcctcagacaaatgtcctggaacatttccccaatgtttccttttaaatgtttaatgggtttaggccttaagtctttaatccattttcatttga-tttttgtgtatggtgagagttagaggtgcagtttcatccctctgcatgtagatatacagttttccctgcaccatttattgaaatgacagtcccttcctgattttagacctttagaacct----ttgtcaaactccattggatgtaaatgggtgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47748928 681 + 51301725 TCTCGTTTCTCCACCACCTTGTCAgtattttttttgtctgtctttgaaAT-AAAAGCCATTGTAATGGGGTGCGATGATAGCTCCTTgtgatttca-tttgcatttctctgatgattag-tgatactgagca-ctTTTCATATACGCAATGttcatttgtatgttttgttcattgagaaatgtctgttcaggtcttttactaattttataattaaattagtaattttattGAGGTGTTTGAGCTTCTTTTATATTCTAGTTCTTAATCCCctctcagatgcatagtttgcaaatatttgctcccattccat---gggttgtctcttcttcactttgttggttggttcctttgcagtgcagaagctgctcagtttgatataatcccaatGGTCTATGTTTTTGTGTTCTGATTACTTGTGTTTTTGAGG-TTTAAACAAAATGTCTTCCCTCAGACAAATGTCCTGGAGCATTTCCCCAGTGTTTCCTTTTAGATGTTTAATGGGTTCAGGCCTTAAGTTGTTAacccattttcatttga-tttttgtatatggtgagaggtagagGTGCAGTTTCATCCCTCTGCATGtagctatccagttttccctgcatcatttattgaaaCCACTGTCCTTTCCAGATTGTAGATTCTTGGAACCT----TTCTCAAAGTCCATTGGATGTAAATAGGTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47380581 665 + 50890351 tctcctttctctaccaccttaccagcatttgttttgtctgtctttctgataaaaagccattgtaatggggtaagatgatagctcactgtgaattcagtttgcatttctc---tgattagttgatactaagcattttttcatatatacaatatccatttgcatgttttgttcgttgagaaatgtctgttcagatcttttattaattttataattaaattatttgttttattgaggtgtttaagcttcttatatattctagttgttaatcccctc-caagtgcatactttacaaat----------attctgt---gggttgtc---tcttcactttgtttgttgcttcctttgcggtgcagaagctgcttagtttggtgtaatcccaatcgtcta----tttttgttttgattgtttgtgtttttgagattttaaacaaaatgtctttcctcagacaaatgtcctggagcatttccccaatgtttccttttaaacgtttgatgggtttaggccttaagtctttaattcattttcatttga-tttttgtgtatggtgagagttagaggtgcagtttcatccctctgcatgtagatgtacagttttccctgcaccattttttgaaatgacagtcccttcctgattttagacctttagagcct----ttgtcaaactctattggatataaatgggtgg i chlSab2.chr6 I 602 I 93141 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=18828.000000 s hg38.chr19_GL949747v2_alt 455877 15 + 729520 attatatctgtgttc s panTro4.chr19 59696388 15 + 63644993 attatatctgtgttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56595976 15 + 60714840 attgtatctgtgttc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55629148 15 + 59248254 attacgtctgtgttc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47749609 15 + 51301725 ATTACATCTGTGTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47474387 15 + 50890351 attatatctgtgttc i chlSab2.chr6 I 93141 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=74881.000000 s hg38.chr19_GL949747v2_alt 455892 100 + 729520 ttcattctgctccattgctctaagggc----ctttatgccaatgtcatgctgttgtgcttactacagctttgtaacatatttttaagtcagggagtgtgaggcc s panTro4.chr19 59696403 100 + 63644993 ttcattctgctccattgctctatgggc----ctttatgccaatgtcatgctgttgtgcttactacagctttgtaacatatttttaagtcagggggtgtgaggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56595991 100 + 60714840 ttcattcttctccattgctctatgggc----ctttatgtcaacgtcatgctgttgtgcttactacagctttgtaacatatttttaagtcagggactgtgaggcc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47749624 104 + 51301725 TTCATTCTGCTCCATTGTTTTATGTGCTTTTCTTTATGCCAGTGTcatactgttttgtttactacagctctgtaacatatttttaagtcaggtagtgtgatact i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47474402 104 + 50890351 ttcatttttctccattgttctatgcacttttctttatgccaacgtcatgctgttttgtttactacagctctgtaacatatttttaagtcaggtaatgtgatgtt i chlSab2.chr6 C 0 T 93141 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=2019.000000 s hg38.chr19_GL949747v2_alt 455992 7 + 729520 tccagcA s panTro4.chr19 59696503 7 + 63644993 tccagca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56596091 7 + 60714840 tccagcA i ponAbe2.chr19 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e chlSab2.chr6 47474506 93141 + 50890351 T e papAnu2.chr19 47749728 0 + 51301725 C e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=35636.000000 s hg38.chr19_GL949747v2_alt 455999 49 + 729520 CCTGTTTTGTCTTTATACCTCGAAATCTCAGGACACTGGGCATCATTTA s panTro4.chr19 59696510 49 + 63644993 cctgttttgtctttattcctcgaaatCTCAGGACACTGGGCATCATTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56596098 49 + 60714840 CCTGTTTTGTCTTTATACCTCGAAATCTCAGGACACTGGGCATCATTTA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47749728 49 + 51301725 cCTGTTTTCTCCTTATACCTTAAAGTCTCAAGATAGTGGGCATCACGTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47381365 49 + 50890351 cctgttttctcctCATACCTTGAAGTCTCAAGACAGTGAGCATCACATA i chlSab2.chr6 T 93141 I 93141 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=273.000000 s hg38.chr19_GL949747v2_alt 456048 1 + 729520 A s panTro4.chr19 59696559 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56596147 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e chlSab2.chr6 47381414 93141 + 50890351 I e papAnu2.chr19 47749777 0 + 51301725 C e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=4877.000000 s hg38.chr19_GL949747v2_alt 456049 8 + 729520 CAATGATG s panTro4.chr19 59696560 8 + 63644993 CAATGATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56596148 8 + 60714840 CAATGATG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47749777 8 + 51301725 CAATGATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47474555 8 + 50890351 CAAAAATT i chlSab2.chr6 I 93141 T 19749 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=230088.000000 s hg38.chr19_GL949747v2_alt 456057 290 + 729520 ATGGAGAAGGGGACGCCAGGACTCCTAGGGCCCAACATTAGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCTTTGAGTAGAAGACAGGCATCCTCATTTCCTCACCTCTCTCCTGTCCTGTGTTCTAGGAAACTCTTCAAGTAGTTCATCTTCACCCACTGAACCAAGCTCCAAAACTGGTGAGTAAAG-ATCCCTCTTATCTCTGCTTTTGGAAACCTGGGGAGGTTGGTATcttggattcaagcattggctcagcacctcccagctctgtgattgtggg s panTro4.chr19 59696568 290 + 63644993 ATGGAGAAGGGGACGCCAGGACTCCTAGGACCCAACATTAGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCTTTGAGTAGAAGACAGGCATCCTCATATCCTCATCTCTCTCCTGTCCTGTGTTCTAGGAAACTCTTCAAGTAGTTCATCTTCACCCACTGAACCAAGCTCCAAAACTGGTGAGTAAAT-ATCCCTCTTATCTCTGCTTTTGGAAACCTGGGGAGGTTGGTATcttggattcaagcattggctcagcacctcccagctctgtgactgtggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56596156 290 + 60714840 ATGGAGAAGGGGACACCAGGACTCCTAGGGCCCAACATTAGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGAATTCCTTTGAGTAGAAGACAGGCATCCTCATTTCCTCACCTCTCTCCTGTCCTGTGTTCTAGGAAACTCTTCAGGTAGTTCATCTTCACCCACTGAACCAAGCTCCAAAACTAGTGAGTAAAG-ATCCTTCTTATCTCTGCTTTTGGAAACCTGGGGAGGTCGGTACcttggattcaagcattggctcagcacctcccagctctgtgattgtggg i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47749785 291 + 51301725 ATGGAGAAGGGGATGCCAGGACTCCCAGAGCCCAATATTAGATAACAGAATGTTGGCCAGGAACCAACCTCAAAGATGTCCTTTGAGTAGAACACAGGCATCCTTATTTCCACACCTCTCTCCTGTCCCATGTTCTAGGAAACCCTTCAAGTAGTTGGCCTTCACCCACTGAACCAAGCTTCAAAACTGGTAAGTGAAGGATCCCTCTTACCTCTGCTTTTGAAAACCCAGGGAGGTCGAAGCCTTGGATTCAAGCGTTGGCTCAGCACCTCCCAGCTCTGTGATTGTGGG i papAnu2.chr19 C 0 I 21249 s chlSab2.chr6 47454814 288 + 50890351 ATGGAGAAGAGGATCCCAGGACTCCCAGATCCCAGTGTTGGATAACAGAGTGTTGGCCGTGAACCAACCTCAAAGATTTCCCTTGAGTAGAGGACAGGCACCCTCATTTCCTCACCTCTGTCCTGCCTC-TATTCTAGGAAACCCTTCAAGTACTTGGCCTTCACCCTCTGAACCAAGCTGCAAAACTGGTGAGTAAAGAATCCCTCTTATCTCTGCTTTTGGAAACCTGGGGAGGTggaagccttggattcaagccttggctcagcacctcccagctc--tgactgtgag i chlSab2.chr6 T 19749 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=283658.000000 s hg38.chr19_GL949747v2_alt 456347 416 + 729520 cctgtcttctaaca--tctctgacccccagACACTACAACAGCGAAGGGTATCTGAGGACAGCAAAGGGCTCAGTGAAGTCTCTTCATTTCAAAT-TTCTGCAGCTGAGACCTCCTCCAAGCTAGACGGACGAGTACAAATCTGACATCCTTCTCAGGGATAAAGTGGTGTTTTTTCTGCCTGCATTCCAAATTGGAGGATAAATTTGAGGGGACTTGAGAGAGGGAGGGGAAGGGAACATCTGATGAGGGAAAGGTGATTTAGAGAAGTTCCACTTGCCAAGGAATGAGCCCCTGTTGGTCATGATGCGACCTTGGCTGAGTCAGCAGAGCAAGAGCCTTGCAGTAAGAAGGAACGTAGTTCATCCACAAATATGACACTTCCACTTACTCACTTATTCAGCCACTGCCCTGTGCTCT s panTro4.chr19 59696858 416 + 63644993 cctgtcttctaaca--tctctgacccccagACACTACAACAGCGAAGGGTATCTGAGGACAGCAAAGGGCTCAGTGAAGTCTCTTCATTTCAAAT-TTCTGCAGCTGAGACCTCCTCCAAGCTAGACGGACGAGTACAAATCTGACATCCTTCTCAGGGATAATGTGGTGTTTTTTCTGCCTGCATTCCGAATTGGAGGATAAATTCGAGGGGACTTGAGAGAGGGAGGGGAAGGGAACATCTGATGAGGGCAAGGTGATTTAGAGAAGTTCCACTTGCCAAGGAATGAGCCCCTGTTGGTCATGATGCGACCTTGGCTGAGTCAGCAGAGCAAGAGCCTTGCAGTAAGAAGGAACGTAGTTCATCCACGAATATGACACTTCCACTCACTCACTCGTTCAGCCACTGCCCTGTGCTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56596446 414 + 60714840 cctgtcttctaaca--tctctgacccccagACACTACAACAGTGAAGGGTATCTGGGGCCAGCAAAGGGCCCAGTGAAGTCTCTTCATTTCCAAT-TTCTGCAGCTGAGACCTCCTCCAAGCTAGACGGATGAGTACAAATCTGACATCCTTCTCAGGGATAATGTGGTGTTTTTTCTGCCTGCATTCCAAACTGGAGGATAAATTCGAGGGGACTTGAGAGA-GGAGGAGAAGGTAACATCTGATGAGGGCAGGGTGATTTAGAGAAGTTCCACTTGCCAAGG-ATGAGCCCCTGTTGGTCATGGTGCAACCTTGGCTGAGTCTGCAGAGCAAGATCCTTGCAGTAAGAAGGAACGTAGTTCATCCGCGAATATGACACTTCTACTCACTCACTCGTTCAGCCACTGCCCTGTGCTCT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47771325 404 + 51301725 CCTGTCTTCCACCATGTCTCTGAACTCCAGACACTCCAACAGCAAAAGGGACCTTGGCCCAGCACAGGGCTCAGTGAATTCTCTTAATCTCTAATTTTCTGTAACTGAGACCTCCTACAAGCTGAAACAATGATTGCAAATCTGACATCCTTCTCAGGAAAAATGCAGTGTTTGTTCTCCCTGCATTCCTAACTGGAGGATGAATTCCT-GGGATttgaaagagggaaaggaagggaacaTCTAATGAGGCTGAGGTGTTTTAGAAAAGTTCCACTTGCCAAGGAATGAGCTCCTGTGGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCAGTAA--------AGAGC-CTTGCACGC-----ACACTTCGACTCACTGACTCATTCAGCCATGGCCCCAAGCTCA i papAnu2.chr19 I 21249 C 0 s chlSab2.chr6 47455102 413 + 50890351 cctgtcttccaacatctctctgaactccagacactccaacagcaaaaggaatCTGAGCCCGGCACACAGCTCAGTGAAGTCTCTTAATCTCTAATCTTCTGCAGCTGAGACCTCCTACAAGCTGGAAGAATGATTGCAAATCTGACATCCTTCTCAGGAAAAA-GCAGTGTTTGTTCTCCCTGCATTCCTTACTGGAGGATAAATTCCTGGGGGCTTGAAAGAGGGAAGGGAAGGGAACATCTAATGAGGGTGAGGTGTTTCAGAGAATTTCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAGGCAACCCTGGCTGACTCACCAGAGTAAGAGCCTTGCAGTAACAGAGAACAGAGCTCATGCACGC-----ACACTTTGACTCACTGACTCATTCAGCCATGGCCCCTTGCTCA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 16348 3529 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=271583.000000 s hg38.chr19_GL949747v2_alt 456763 264 + 729520 GACTGTACAGTGTGGAACCCtttcctgctgttgccataataaatctccacaatcttcatggatgacaacaacacagcttttaaaattatcttacagtgttatagctcagaaatatgaaatgcatttcactgggctaaaatcaaggtgactgcgaggctgccttttctctgaaggttccaggcgagaatcggcttttcacatttcccagctcccagaggttcccacgctccttggcatctggtccccatcctccttcctcgaagc s panTro4.chr19 59697274 264 + 63644993 GACTGTACAGTGTGGAACCCtttcctgctgttgccataataaatctccacaaacttcatggatgacaacaacacagcttttaaaattatcttacagtgttatagctcagaaatatgaaatgcatttcactgggctaaaatcaaggtgactgtgaggctgccttttctctgaaggttccaggcgagaatcggcttttcacatttcccagctcctagacgtttccacattccttggcatctggtccccgtcctccttcctcaaagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56596860 264 + 60714840 CACTGTACAGTGTAGAACCCtttcctgctgttgccataataaatctacacaaacttcatggatgacaacaacacagcttttaaaattctcttacagtgttatagctgagaaatatgaaatgcatctcactgggctaaaatcaagttgactatgaggctgccttttctctgaaggttccaggcgagaatcagcttctcacgtttcccagctactagaggttcccacgttccttggcacctggtccccttcctccttcctcgaagc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 19877 256 - 21488 GGCTGTGCAGTAGGGA--CCtttcctattg-tgccataacaaat-tccacaagattcatgggtga-aacaaaacagttatttaa--tatcttacagtggggtagctca-aagtatgaagtgcatctcactgggctaaaatcaaggtgacagcaaggctgccttcccactgagggttccaggcgagaatctgcttctcacttttcccagcttctagaagctcccacattccttggctcctggtccccttcctccttcctcaaagc i nomLeu3.chr10_GL398297_2_random I 3529 C 0 s papAnu2.chr19 47771729 261 + 51301725 GGCTGGGCAGT-TAGAATCCTTTCCTAGTGTTGCcataacaaatttccacaaaattGGTGGATGAAAACAAAacgactttttaa-ttattttacagtgCTGTAGCTCA-AAGGATGAAATGCacctcactgggctaaaatcaaggtgacAGCAAGgctgccttccctctgaaggTTCCAGGCGAGAATCTGCTCTTCACATGTCCCAGTTTCTAGAAGCTCCCACGTTCCTTGGCTCCtggtccccttcctccttcctcaaaAC i papAnu2.chr19 C 0 T 21242 s chlSab2.chr6 47455515 261 + 50890351 GGCTGTGCAGT-TAGAATCCttttctattgttgccataacaaatttccacaaaattggtggatgaaaacaaaacagctttttaa-ttaccttacagtgctgtagctca-aaggatgaaatgcatctcacagagctaaaatcaaggtgacagcaaggctgccttccctctgaaggttccaggcgagaatctgctttctacatgtcccagtttctagaggctcccacgttccttggctcctggtccccttcctccttccacaaaac i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=125143.000000 s hg38.chr19_GL949747v2_alt 457027 122 + 729520 ccacaaaagctcatcacatctctcacgtggcatcactcagatccctcttcctta-cctcacctctttctctaagtgttgctctgactttttcttcctcttttaaagactttgggattctattg s panTro4.chr19 59697538 122 + 63644993 ccacaaaggctcgtcacatctctcacgtggcatcactcagatccctcttcctta-cctcacctctttctctaagtgttgccctgactttttcttcctcttttaaagactttgggattctattg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56597124 122 + 60714840 ccacaaagtctggtcacgtctctcacatggcatcactcagatccttcttcctta-cctcacctctttctctaagtgttgccctgactttttcctcctcttttaaagactttgggattctattg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 20133 120 - 21488 ccaaaaaggctggtcaca--actcacatggcatcactcagacccttcttcctta-ccacacctctttctcggaatgctgctctcccttcttccccttcttttgaaaacttggggattctattg i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47750748 122 + 51301725 CCACAAAGGCTGGTCACATCTCTCACATGACATGAGACAGATCATTCTTCCTCA-CCACACCTCTTTCTCTGAATGTTGTTCTgccttcttcctcatcttttaaaGCCCTTGGGATTCTATTG i papAnu2.chr19 T 21242 T 48967 s chlSab2.chr6 47455776 121 + 50890351 ccacaaagactggtcacg--tctcacatggcatcactcagacccttcttccttgtccacacctctttctctgaatgttcctctgctttcttcctcatttcttaagggctttgggattttattg i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=103913.000000 s hg38.chr19_GL949747v2_alt 457149 135 + 729520 agtttaccaagat---aatccatcacaatctccctaaaatcacccaagataacctctttttaagttcagctgattagcaaccataattccatctgcaatctttattcctcct-ttcatgtaaaataacatattcacaag s panTro4.chr19 59697660 135 + 63644993 agtttaccaagat---aatccatcacaatctccctaaaatcacccaagataacctccttttaagttcagatgattagcaaccataattccatctgcaatctttattcctcct-ttcatgtaaaataacatattcccaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56597246 135 + 60714840 agtttactaagat---aatctatcataatctccctaaaatcacccaggataccctcgttttaagttcagctgattagcaaccataattccatctgcaatcttcattcctcct-ttcatgtaaaataacatattcacaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 20253 138 - 21488 ggttcaccaagataaaaatccatcataatctcctggaaatcatccaggatacccttattttaagttcagctgattagcaaccgtaattccatctgcaatcttcattccccct-ttcatgtaaaataacatattcacaag i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47455897 136 + 50890351 ggttcaccaagat---aatctatcatcatctccctaaaatcatccaggataccctcctttccagttcagctgattagtaaccgtaattccatctgcaatcttcgttcttcctctccacgtaaaatcacatattcacaag i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e papAnu2.chr19 47750870 48967 + 51301725 T e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=226120.000000 s hg38.chr19_GL949747v2_alt 457284 240 + 729520 ctatggaggctaggacagggacattttgggggtgggccagcattctcctgccttccacaAATGGTAAACACGATGCATTTGGCCTCTGCTCTTAGGACACTGACATTGCAGATGGGCAAATGGGAGGGCAGAATATGAATGCACAAGTGGACCAGT-AATGATTGATCCATTGGGAAGCATCCGTGCATGAAATCTATTTACCtatttatttatctatttatctatttatgtatttattta s panTro4.chr19 59697795 240 + 63644993 ctatggaggctaggacagggacattttgggggtgggccagcattcttctgccttccacaAATGGTAAACACGATGCATTTGGCCTCTGCTCTTAGGACACTGACATTGCAGATGGGCAAATGGGAGGGCAGAATATGAATGCACAAGTGGACCAGT-AATGATTGATCCATTGGGAAGCATCCGTGCATGAAatctatttacttatttatttatctatttatatatttatgtatttattta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56597381 240 + 60714840 ctatggaggctaggacagggacattttgggggtgggccagcattctcctgccttccacaAATGGTAAACACGATGCATTTGGCCTCTGCTCTTAGGACACTGACATTGCAGATGGGCAGATGGGAAGGCAGAATATAAATGCACAAGTGGACCAGT-AATGATTGATCCATTGGGAAGCATCTGTGCATGAAatctatttacttatttatttatctatttatctatttatgtatttattta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 20391 233 - 21488 ctatggagatgaggacatggacatttttggggTTGGGTGGCATTCTT----CTTCCACAAATAGTAAACAAGATGCATTTGGCCTCTGTTTTTGGGACACTGCTATTGCGGGTGGTTAAATGGGAGGACAGAAAATGTATGCACAAGTGGACCAATAAACAAATGATCCATTGAGAAGCATCTGTGCATGAAatctatttgtttatttatttgtttacttacttactaacttattta---- i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47701903 217 + 51301725 CTATGGAGGCTAGGACAGTGACATTTTGGGGTGGGgc-agcattctcctgccttccaCAAATGGTAAACAGGGTGCATTCGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAAAACGAGGGCAGAAAATGAATGCACAAGTGGATCAATAAATGAATGATCCATTGGGAAGCATCTGTGCACCAaatctgtttttttg-----gtttttgtt---------ttgt--------- i papAnu2.chr19 T 48967 C 0 s chlSab2.chr6 47456033 231 + 50890351 gtgtgaaggctaggacagggacattttgggggtgggg-tggattctcctgccttccacaAATAGTAAACAGGATGCATTTGGCCTGTGCTCTTGGGACACTGACGTTGCAGATGGGTAAACGGGAGGAAAGAAAATGAATGCACAAGTGGACCTATAAATGGTTGATCCACTGGGAAACATCGGTGCATGAAattgatttatttatgtatgtattaatt---------ATGTAtttattaa i chlSab2.chr6 C 0 I 23 e calJac3.chr22 45773030 49419 + 49145316 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=7864.000000 s hg38.chr19_GL949747v2_alt 457524 13 + 729520 tttGCGGcgaagt s panTro4.chr19 59698035 13 + 63644993 tttgcagcgaagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56597621 13 + 60714840 tttgcggcgaagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 20624 12 - 21488 -ttgagacggagt i nomLeu3.chr10_GL398297_2_random C 0 I 20 s papAnu2.chr19 47702120 13 + 51301725 tttgaggtagagt i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e chlSab2.chr6 47456264 23 + 50890351 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=3426.000000 s hg38.chr19_GL949747v2_alt 457537 14 + 729520 cattctctgtcccc- s panTro4.chr19 59698048 14 + 63644993 cattctctgtcccc- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56597634 14 + 60714840 cattgtctatcccc- i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47702133 15 + 51301725 ctcactctgtcccac i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 20636 20 - 21488 I e chlSab2.chr6 47456264 23 + 50890351 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=5332.000000 s hg38.chr19_GL949747v2_alt 457551 6 + 729520 gggctg s panTro4.chr19 59698062 6 + 63644993 aggctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56597648 6 + 60714840 aggctg i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47702148 6 + 51301725 aggctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47456287 6 + 50890351 aggctg i chlSab2.chr6 I 23 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 20636 20 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=46299.000000 s hg38.chr19_GL949747v2_alt 457557 47 + 729520 gagtgcagtggcatgacctcagctcaccacaacctccgcctcccggg s panTro4.chr19 59698068 47 + 63644993 gagtgcagtggcatgacctcagctcaccacaacctccgcctcccggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56597654 46 + 60714840 gagtgcag-ggcaagacctcggctcagcacaacctccacctccctgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 20656 47 - 21488 gagtgcagtggcatgatctcagttcactgcaacctccacctcatagg i nomLeu3.chr10_GL398297_2_random I 20 C 0 s papAnu2.chr19 47702154 47 + 51301725 gagtgcagtggcacaatctcaactcactgcaccctctgcctcctggg i papAnu2.chr19 C 0 I 69789 s chlSab2.chr6 47456293 47 + 50890351 cagtgcagtgtcacgatcttggctcactgtaacctccgcctcctggg i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=36122.000000 s hg38.chr19_GL949747v2_alt 457604 71 + 729520 ttcaggcgattctcctgcctcagcctcctgactagttgtgattccagtcccctccaccacacccagctaat s panTro4.chr19 59698115 71 + 63644993 ttcaagcgtttctcctgcctcagcctcctgactagttgtgattccagtcccctccaccacacccagctaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56597700 71 + 60714840 ttcaagcgattctcctgcctcagcctactgactagctgggattccagtcccttccaccacacccagctaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 20703 69 - 21488 tggaagtgatt-tcctccatcagcctctccagtagctgggattacagacaaccacagcatgcct-gctact i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47456340 71 + 50890351 ttcaagtgattcttctgcctcagcctctcaagcagcttggatacaggcacccgccaccacacctggctaat i chlSab2.chr6 C 0 I 12 e calJac3.chr22 45773030 49419 + 49145316 I e papAnu2.chr19 47702201 69789 + 51301725 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=3740.000000 s hg38.chr19_GL949747v2_alt 457675 12 + 729520 attcttttatat s panTro4.chr19 59698186 12 + 63644993 tttcttttatat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56597771 12 + 60714840 tttcttttatat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 20772 12 - 21488 ctttttgcatag i nomLeu3.chr10_GL398297_2_random C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e chlSab2.chr6 47456411 12 + 50890351 I e papAnu2.chr19 47702201 69789 + 51301725 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=222496.000000 s hg38.chr19_GL949747v2_alt 457687 332 + 729520 tttttagtagagatggagtttcaccatgttgcgcagatt-gtctccaactcccaacctcaagtgatccgaccgtctcagcatcccaaaatgctgggactcaaggtgtgagccactgcgcccagccGAAATTTAAAATAAATAATAAAGAATTCTAAGTGTATAATTTCAGGAGACAGAGAAAGTCTCACTAATCAGATAATATTTGTGACCATAATGAAAAAAAAAAGTAGATTCAACCCCTGGAAGATTGGCGGAAGGATTTTCCACACACAGCTGTCAGCCGTGAAGGCACAAATGTGAAAACAATCTGATGTGGAAGGAAGAGGCTCTGC s panTro4.chr19 59698198 331 + 63644993 tttttagtagagatggagtttcaccatgttgcgcagact-gtctccaactcccaacctcaagtgatccaaccgtctcagcatcccaaagtactgggattacaggcgtgagccactgcgcccagcTGaaatttaaaataaataataaaGAATACTAAGTGTATAATTTCAGGAGACAGAGAAAGTCTCACTAATCAGATAATATTTGTGACCATAATG-AAAAAAAAGGTAGATTCAACCCTTGGAAGATTGGCAGAAGGATTTTCCACACACAGCTGTCAGCCGTGAAGGCACAAATGTGAAAACAATCTGATGCTGAAGGAAGAGGCTCTGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56597783 329 + 60714840 tttttagtagagatggagtttcaccatgttatgcagact-gtctccaactcccaatctcaagtaatccgaccgtctcagcatcccaaaatgctgggactcaaggcgtgagccactgcgcccagccaaaatttaaaataaataataaaCAATTCTAAGTGTAAAATTTCAGGAGACAGAGACAGTCTCACTAATCAGATAATATTTGTGACCGTAATG---AAATAAAGTAGATTCAACCCCTGGAATATTGGCAGAAGGATTTTCCACACACAACTGTCAGCCGTGAAGGCACAAAGGTGAAAACAATCTGATGTTGAAGGAAGAGGCGCTGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 20784 323 - 21488 tttct-gtagagaggatgtttcaccatgttgtccgggctggtctcaaactcccaatctcaagtgatcaaacagcctctgcctcccaacgcactgggataagaggcatgagccacagggccgagccAAATTTTCAAATCAATAATAGATAATGTTGAGTGTATAATTTTAGGTGACAGAGAGGGTCTCACTAATCA---CATATTTGTGATGTTAATG----AAAAAAATGGATTCAACCCATGGAAGACTGGTGGAAGGATTTTC--CACACAACTGTCAGCCGTGAAGGCACAAAGGTGAAAACAATCTGATGTTGAAGGAAGAGGCTCTGC i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47456423 327 + 50890351 ttgttgttagagaccatgtttcaccatgtggcccagtct-atctccaactccctatctaaagtaatccgaccgcctcagcctcccaaagtgctcggattataggcgtgaaccccggcacccagccAGAATTTAAAATAAATAACAGATAATACTGAGTGTATGATTTCAGGTCACAGAGAAGTTCTCACTGATCAAATAATACTTGTGATCTTAATG----AAAAAAATAGA-TCAACCCCTGGAAGACTGGCGGAAGGATTTTCCACACACAGCAGTCAGCTGTGAAGGCACAAAGGTGACAACAATCTTATGTGGAAGGAAGAGGCTCTGC i chlSab2.chr6 I 12 I 6926 e calJac3.chr22 45773030 49419 + 49145316 I e papAnu2.chr19 47702201 69789 + 51301725 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=3293.000000 s hg38.chr19_GL949747v2_alt 458019 9 + 729520 ATTCAAATG s panTro4.chr19 59698529 9 + 63644993 ATTCAAATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56598112 8 + 60714840 -CTCAAATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 21107 8 - 21488 -CTGAAATG i nomLeu3.chr10_GL398297_2_random C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e chlSab2.chr6 47456750 6926 + 50890351 I e papAnu2.chr19 47702201 69789 + 51301725 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=256715.000000 s hg38.chr19_GL949747v2_alt 458028 346 + 729520 CTGGGAATGAAGTGGGGAGAATGACAAGACGACTGTGGAGAGACGGAGAGCACTCTGGGTACACAGGAAACTAAGGAGGAACAAGGAGCGTGTGTTTGACACTCACAGCCATTGGATTCACCTCGGGG-TAGCCAGGAATCCCTACATGATTAATA-TGACTGACATGAAAATAA-GGACGCCCAAGTGCGTAACTGGAATCTAGGAGACCGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGATTTAGACACTAAATGAATGAAGTAGATGGGTATAAGATATGTCTGTGAGGTAGAATCATTTGTAGGGAGGGCTTGCTGGATTTGATAATGCCTA s panTro4.chr19 59698538 347 + 63644993 CTGGGAATGACGTGGGGAGAATGACAAGACGACTGTAGAGAGACGGAGAACACACTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTTATACTTACAGCCCTTGGATTCACCTCGGGG-TAACTAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAA-GGACGCCCAGGTGCATAACTGGAATCTAGGAGACCGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTAGTGCTGATTTAGACACTAAATGAATGAAGTAGATGGATATAAGATATGTCTGTGAGGTAGAATCATTTGTAGGGAGGTCTTGCTGGATTTGATAATGCCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56598120 346 + 60714840 CTGGGAATGAGATGGGGAGAATGACAAGATGAC--TAGAGAGATGGAGAGTACAATGGGTACACAGGAAACAAAGGAGGAACAAGGAGTGTGTGTTTGATACTCACGGCCCTTGGATTCAACTCAGGG-TAAGTAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTACGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGATTTAGACCCTAAGTGGATGAAGTAGATGGATATAAGATATGTTTGTGGGGTAGAATCATTTGCAGGGAGGGCTTGCTGGATTTGATAATGCCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 21115 345 - 21488 CTGGGAATGAGATGGGGAGAATGGCAAGTTGACTGTAGAGAGATGGAGAGCACACTGGGTACATAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTTATACT--CAGCCGTTGGACACACCTCGGGGCTAACTGGGAATCCCTACATGATTAATAGTGACTGACATGAAAATCAGGGAGGCCCAGGTGCGTAACTGGAATTTAGGAGACCGTGGAAAAGGCAATTCCTGCCCCACTGGTGAAATGTGGTGCTGATTTAGACATTAAATGAATGAA--AGATGGACACAAGATGTGTTTGTGAGATAGAGTAATTTGCAGGGAGGGCTTGTCTAGTTTGATTTTTCCTA i nomLeu3.chr10_GL398297_2_random C 0 T 13862 s chlSab2.chr6 47463676 346 + 50890351 CTGGGAATGAGATGGGGAGAATTACAAGACCACTGGAGAGAGA-GAAGAGCACACTGGGCACACAGGAAACTAAGGAGG-ACAAGGAGTGTGTGTTTTATACTCACAGCCCTTGGATTCACCTCGGGC-TAACTAGGAATCCCTACGTGATTTATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCCACCTCACTGGTGAAATATGTTGCGTATTTAAACACTAAATGAATGAAGTGGATGGATACAAGATGTGTATGTGAGGTAGAATAATTCACAGGGAGGGCTTGCCTGGTTTGATTTTTCCTA i chlSab2.chr6 I 6926 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e papAnu2.chr19 47702201 69789 + 51301725 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=91075.000000 s hg38.chr19_GL949747v2_alt 458374 216 + 729520 CTTATTTAATTTTGAATATATTAATTTCTTTCTGAGATTTATTTTTCCTACATGTAAATCAATATCTGGCAGAGGAGTGATTGATAGATAGATGAGGGGTGGTGCAAATGAAGGGACTTATTATAGCATAATATACAAGTCTGTGAATgggagcttacgcctgtaacccaacactttgggaggccaaggcgtttggatcacttgaggtcaggagtt s panTro4.chr19 59698885 212 + 63644993 CTTATTTAATTTTGAATTTATTAATTTCTTTCTGAGATTTATTTTTCCTACATGTAAATCAATATCTGGCAGAAGAG----TGATAGATAGATGAGGGGTGGTGCAAATGAAGGGACTTATTATAGCATAATATACAAGTCTGTGAAcgggagcttacgcctgtaacccaacactttgggaggccaaggcgtttggatcacttgaggtcaggagtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56598466 199 + 60714840 CTTATTTAATTTTGAGTTTATTAACTTCTGTCTGAGATTTAGTTTTCCTTCTTGTAAATCAATATCTGGCAGAGGAG----TGATAGATAGATGAGGGGTGGTGCAAATGAAGGGACTTATTATAAC-------------CTGTGAAcgggagcttacacctgtaacccaacattttgggaggccgaggttgttggatcacttgaggtcaggagtt i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47464022 212 + 50890351 ATTGTTCAATCTTCACTTCATTAATTTCTTTCTGAGATTTATTTTTCCTACATGTAAATCAATACCTGGCAGAGGAC----TGATTGATACATGAGGCGTGGTGCAAAGGAAGAGACTTATTATAATATAACACGCAAGGTTGTGAAcggtggctcacacctgtaacccaacattttgggaggctgaggcggatggatccattgaggtcaggagtt i chlSab2.chr6 C 0 T 19956 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 21460 13862 - 21488 T e papAnu2.chr19 47702201 69789 + 51301725 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=19641.000000 s hg38.chr19_GL949747v2_alt 458590 71 + 729520 tgagaccagcctggccaacatggagaaaccccatgctctttttagcaaccagtcctagggacctcatggag s panTro4.chr19 59699097 71 + 63644993 tgagaccagcctggccaacatggagaaaccccatgctctttttagcaaccagtcctagggacctcatggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56598665 71 + 60714840 tgagaccagcctggccaacatggagaaaccccatgttctttttagcaaccagccttagggacctcatggag i ponAbe2.chr19 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 21460 13862 - 21488 T e chlSab2.chr6 47464234 19956 + 50890351 T e papAnu2.chr19 47702201 69789 + 51301725 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=9195.000000 s hg38.chr19_GL949747v2_alt 458661 20 + 729520 aacttgccaaccacgtctca s panTro4.chr19 59699168 20 + 63644993 aacttgccaaccacgtctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56598736 20 + 60714840 aacttgccaaccacgactca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 7598 20 - 21488 aacttgctaaccccgtctcc i nomLeu3.chr10_GL398297_2_random T 13862 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e chlSab2.chr6 47464234 19956 + 50890351 T e papAnu2.chr19 47702201 69789 + 51301725 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=88656.000000 s hg38.chr19_GL949747v2_alt 458681 127 + 729520 tgggg------------acagcattaatgtattcatgatggatccacccccataactggaacgtctctcaataggcccagcctcccacactgcgagataagtgtcaacgtgaggtttggcggggtcaaacatccaaact s panTro4.chr19 59699188 127 + 63644993 tgggg------------acagcattaacgtattcatgatggatccatccccataactggaacatctctcaataggcccaacctcccacactgcgagataagtgtcaaagtgaggtttggcggggtcaaacatccaaact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56598756 139 + 60714840 taggattatgttatgtctcagcattaatgtattcatgatggatccacccccataactggaacatctctcaacaggcccaacatcccacactgcgagataaatgtcaacgtgaagtttggcagggtcaaacatccaaact i ponAbe2.chr19 C 0 I 28339 s nomLeu3.chr10_GL398297_2_random 7618 127 - 21488 ttggg------------acagcattgatctgttcatgatggattcactgccatgacccaaacacctcccaagaggcccaacctcccacaatgggggttaaatttcaatgtgaggtttgaaggggtcaaacatctaaact i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47444278 127 + 50890351 tgggg------------acagcattgatctattcatgatggatccacctccatgacccaaacacctcccaagaggcccaacctcccacactgggggttaaatttcaatgtgaggtttcaaggggtcaaacatctaaact i chlSab2.chr6 T 19956 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e papAnu2.chr19 47702201 69789 + 51301725 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=35690.000000 s hg38.chr19_GL949747v2_alt 458808 54 + 729520 atagcagtggtatccccagcatgttctctgattattttgagaactataactgag s panTro4.chr19 59699315 54 + 63644993 atagcagtggtatccccagcatgttctctgattattttgagaactataactgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56627234 54 + 60714840 aaagtagttgtatcctcagcacgttctatggttactatgagagctataactgag i ponAbe2.chr19 I 28339 C 0 s nomLeu3.chr10_GL398297_2_random 7745 54 - 21488 aaagtaGTTGTATCCTCAGCACTTCCTATGGTTACTATGAGAGCTATAACTGAG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47444405 54 + 50890351 aaagcagttgtatattcagcacgttccatggtgaccgtgagagctgtaaccgag i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e papAnu2.chr19 47702201 69789 + 51301725 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=80957.000000 s hg38.chr19_GL949747v2_alt 458862 80 + 729520 aaagcaggagaaagctgggtatcctgccatcggggaacttgtcctAAACAGATGTTGTATGTGCTTAGCTGGCAACCAAG s panTro4.chr19 59699369 80 + 63644993 aaagcaggagaaacctgggtatcctgccatcggggaacttgtcctAAACAGATGTTGTATGTGCTTAGCTGGCAACCAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56627288 80 + 60714840 aaagtgggagaaagctaggtctcccgccatctgggtgcttgtcctAAAGAGACGTTGTATGTGGTTACCTGTCAATCAAG i ponAbe2.chr19 C 0 T 28202 s nomLeu3.chr10_GL398297_2_random 7799 80 - 21488 AAAGCAGGAGAAAGCTGGGTCTCCCACCATCTGGGTGCTTGTCCTAAAGAGACACTGTATGTGGTTACCTGTCAATCAAG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47771990 80 + 51301725 AGAGCAGGAGAAAGCTGGGTCTCCCGCCATCAGGCCGTTTGTCCTAAGGAGACATTCCACAAGGTTACCTGTCAATCAAG i papAnu2.chr19 I 69789 C 0 s chlSab2.chr6 47444459 80 + 50890351 agagcaggagaaagctgggtcTCCCGCCGTCGGGCCGCTTGTCCTAAGCAGACATTCCACATGGTTACCTGTCAATCAAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=497603.000000 s hg38.chr19_GL949747v2_alt 458942 431 + 729520 AAATGAGAG-ACAATCCATAAAGAGGAACTGCTATAATTAGCTTCTTATTGGATTCCCACCTTCCCCCAGGTATCCGCAGACACCTGCACATTCTGATTGGGACCTCAGTGGCTAtcatcctcttcatcatcctcttcttctttctccttcATTGCTGCTGCTCCAACAAAAAGAGTAAGTCTCACGAAGCAGAGGTCAGAGAGCTCAGGACCATGTGGGGA---------AGCAGGATGGGAGCACACTGGTGTGTGTTCCTGACTGGCAGGATGGTCCCTGGACCAAGGCAGGAGCCACAGAGGCAGGGCTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTATCCTCACGTCCCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAG s panTro4.chr19 59699449 428 + 63644993 AAATGAGAG-ACAATCCATAAAGAGGAACTGCTATAATTAGCTTCTTATTGGATTCCCACCTTCCCCCAGGTATCCGCAGACACCTGCACATTCTGATTGGGACCTCAGTGGCTATCATCCTCTTTATCATCC---TCTTCTTTCTCCTTCATCGCTGCTGCTCCAACAAAAAGAGTAAGTCTCATGACGCAGAGGCCAGAGACCTCAGGGCCATGTGGGGA---------AACAGGATGGGAGCACGCGGGTGTGTGTTCCTCACTGGCAGGATGGTCCCTGGCCCAAGGCAGGAGCCACAGAGGCAGGGCTTTCTAGAGAGAGCACCAGACTCCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTATCCTCATGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56599166 427 + 60714840 AAATGAGAGAACAATCCATAAAGAGGAACTGCTATGATGAGCTTC-TAATGGATTCCCACA-TCCTCCAGGTATCCACAGACA-CTGCACATTCTGATTGAGTCCTCAGTGGCTAT-ATCCTCTTCATCATCCTC-TCATCTTTCTCCTTCATCGCTGCTGCTGCAACAAAAAGAGTAAGTCTCATGACGCAGAGGCCAGAGACCTCAGGGCCATGTGGGGA---------AACAGGATGGGAGCACACCGGTGTATGTTCCTCACTGGCCGGATGGTCCCCGGCCCATGGCAGGAGCCACAGAGGCAGGGCTTTCTAGAGAGAGCAGCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTATCCTCATGTCCCCTGCAGCCACTGACATCCAGGAGAAGGTTCCGTGACAGGCAGAAAG i ponAbe2.chr19 T 28202 I 1 s nomLeu3.chr10_GL398297_2_random 7879 429 - 21488 AAATGCGAG-ACAATTCATAAAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCATCTTCTTCCAGGTAACCCCAGACACCTGCACGTTCTGATTGGGACCTCAATGGTCATCATCCCCTTCGCCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAGAGTAAGTCTCACGCAGCAGAGGCCAGACAGCTCAGGGCCATGTGGGGA---------AGCAGGATGGGAGCACGCAGATGTGTGTTCCTCACTGGCAGGAAGGTCTCTGGCCCAAGGAAGGAGC--CAGAGGCAGGGCTTTGTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTACCCTCACGTCCCCTGCAGCCACTCACATCCAAGAGAAGGTTCCATGACAGGCAGAAAG i nomLeu3.chr10_GL398297_2_random C 0 I 4026 s papAnu2.chr19 47772070 427 + 51301725 AAACGAGAG-ACAATCCATAACAAGGAACTGCTATGATTAGCTTCTTATTGGAGTCTCTTGTTCCTCCAGGTAACCCCAGACACCTGCACGTTCTGATTGGGACCTCAGTGGTCATGATCCTCTTCAccatct---tcttctttctcctgcatCGCTGGTGTTCCAACAAGAAGAGTAAGTCTCACGAAGCAGAGGCCACAGACCTCAGGGCCGTGTAGGGA---------AGCGGGATGGGAGCACGCAGGTGTGTGTTCCTCACCGGCAGGATGGTCTCTGGCCCAAGACaggagccacagaggcagagctttcTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCCCAGACCATTGCCTGATTCTGAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAG i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47444539 436 + 50890351 AAATGCGAG-ACAATCCATAAGAAGGAACTGCTATGATTAGCTTCTTATTGGAGTCTCTTCTTCCTCCAGGTAACCCCAGACACCTGCATGTTCTGATTGGGACCTCAGTGGTCATGATCCTCTTCACCATCT---TCTTCATTCTCCTGCATCGCTGGTGCTCCAACAAAAAGAGTAAGTCTCACGAAGCAGAGGCCACAGACCTAAGGGTCGTGTGGGGAGGAAGGATGAGGAGGATGGGAGCACGCAGGTGTGTGTTCCTCACCGGCAGCATGGTTCCCGGCCCAAGACAGGAGCCACAGAGGCAGGGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCCGATTCTCAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAG i chlSab2.chr6 C 0 I 1 e calJac3.chr22 45773030 49419 + 49145316 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=269467.000000 s hg38.chr19_GL949747v2_alt 459373 345 + 729520 GGGAGACAGAATCACTGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTGAGCTCAGAGAGATAGAATGTCTGGGTCTGGCTGATGACAGCTGAGGGACCTCAGGCACCTACGGCCTCCCGCTGTGTGTTGGTGTCTGCTCATGAAATGAGGACCCAAAAGTGCCCTTCCAGCTGTTTTGATGACTTCTATCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCCGGGGACAGAACAGTGAACAGGGAGGTAGGTTCTCCTCAGCCCAGCCTCATGGATTGAGTCTCATTCCCTAATAGTCTTGAAGAATGTGAGCACCCTCCCTCACTCAGCATT s panTro4.chr19 59699877 345 + 63644993 GGGAGACAGAATCACTGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCCTGCTGTCAGAGAGAGAGAATGTCTGGGTCTGGCTGATGACAGCTGAGGGACCTCAGGCACCTACGGCCTCCCGCTGTGTGTTGGTGTCTGCTCATGAAATGAGGACCCAAAAGTGCCCTTCCAGCTGTTTTGATGACTTCTATCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCCGGAGACAGAACAGTGAACAGGGAGGTAGGTTCTCCTCAGCCCAGCCTCATGGATCGAGTCTTATTCCCTAATAGTCTTGAAGAATGTGAGCACCCTCCCTCACTCAGCATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56599594 344 + 60714840 GGGAGACAGAATCACTGGGATGGGAACTCAGAGCTATTCATGGGAT-GGTCCTTGAGCTCAGAGAGAGAGAATGTCTGGGTCTGGCTGATGACAGCTGAGGGACCTCAGGCACCTACGGCCTCCCGTTATGCGTTGGTGTCTGCTCAAGAAATGAGGACCCACAAGTGCACTTCCAGCTGTTTTGATGACTTCTATCTCCTACAGATGCTACTGTAATGGACCAAGAGCCTGCCAGGGACAGAACAGTGAACATGGAGGTAGGTTCTCCTCAGCCTAGCCTCATGGATTGAGTCTTATTCCCAAATAGTCTTGAAGAATGTGAGCACCCTCCCTCACTCAGCATT i ponAbe2.chr19 I 1 C 0 s papAnu2.chr19 47772498 344 + 51301725 GGGAGACAGAATCAATGGGATGGAAATTGAGAGCCGTTCATGGGGAAGGGTCTTGAACTCAGAGAGACAGAATGCCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCTGGCACCTACAGTCTCCCGCTGCGTGTTGGGCTCTGCACATGAAATGAGGACCCAGACGTGCCCTCTCAGCTGTTTTGATGACTTTTGTCTCCTACAGATGCTGCTGTAATGGACCCAGAGCCTGCGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGGCCCAGCCTCGTGGATACTGCTTTATTCCCTAATAGTCCTGAAGAATGTGAGC-CCCTCCCTCACTCAACATT i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47444976 343 + 50890351 GGGAGGCAGAATCACTGGGATGCCAATTGAGAGCCATTCATGGGAAGGGGTCTTGAACTCAGAGAGACAGAATGTCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCAGGCAGCTACGGCCTCCC-CTGTGTGTTGGACTCTGCACATGAAATGAGGACCCAGACGTGCCCTCCCAGCTCTTTTGATGACTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCTGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCCGCCCAACCTTGTGGATACTGCCTTATTCCCTAATAGTCCTGAAGAATGTGAGC-CCCTCCCTCACTCAACATT i chlSab2.chr6 I 1 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=87060.000000 s hg38.chr19_GL949747v2_alt 459718 80 + 729520 TCCCTCTCTC-CAGGACTCTGATGATCAAGACCCTCAGGAGGTGACATATGCACAGTTGGATCACTGCGTTTTCACACAGA s panTro4.chr19 59700222 80 + 63644993 TCCCTCTCTC-CAGGACTCTGATGATCAAGACCCTCAGGAGGTGACATATGCACAGTTGGATCACCGCGTTTTCACACAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56599938 80 + 60714840 TCCGTCTCTC-CAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACCACGTTTTCACACAGA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47772842 80 + 51301725 TCCCTCTCTC-CAGGACTCTGACGAACCAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGGGTTCTCACACAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47445319 80 + 50890351 TCCCTCTCTC-CAGGACCCTGATGAACACGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTCTCACACAGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102921173 81 + 122678785 TCTCTCTCTCTCAGACCCCTACTGCAGGAGGCCCCCAGGACGTGACATATGCTCAGCTGGACCACCACATCCTCACACAGA i canFam3.chr1 N 0 N 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=138723.000000 s hg38.chr19_GL949747v2_alt 459798 178 + 729520 CAAAAATCACTTCCCCTTCTCAGAGGCCCAAGACACCTCCAACAGATACCACCATGTACATGGAACTTCCAAATGCTAAGCCAAGATC----ATTGTCTCCTGCCCATAAGCACCACAGTCAGGCCTTGAGGGGATCTTCTAGGGAGACAACAGCCCTGTCTCAAAACCGGGTTGCTAGCTC s panTro4.chr19 59700302 178 + 63644993 CAAAAATCACTGCCCCTTCTCAGAGGCCCAAGACACCTCCAACAGATACCACCATGTACATGGAACTTCCAAATGCTAAGCCAAGATC----ATTGTCTCCTGCCCATGAGCACCACAGTCAGGCCTTGAGGGGGTTTTCTAGGGAGACAACAGCCCTGTCTCAAAATCACCTTGCCAGCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56600018 178 + 60714840 CAAAAATCACTGCCCCCTCTCAGAGGCCCAAGACACCCCCAACACATACCACCATGTACATGGAACTTCCAAATGCTAAGCCCAGATC----ATTGTCTCCTGCCCATGAGCAACACAGTCAGGCCTTGAGGGGGTCTTCTAGGGAGACAACAGCCCTGTCTCAGAATCAGCTTGCCAGCTC i ponAbe2.chr19 C 0 I 7597 s papAnu2.chr19 47772922 182 + 51301725 GAAAAACCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAGCGTGTACACGGAGCTTCCAAATGCTGAGCCCAGATCGAAAGTTGTCTTCTATCCATGAGCACCACCGTCAGGCCTTGAAGGGGTCTTCTAGGGAGACAacagccctgtctcaaaaccggCTTCACAGCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47445399 182 + 50890351 GAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAGCGTGTACACGGAACTTCCAAATGCAGAATCCAGATCGAAAATTGTCTTCTACCCATGAGCACCACCATCAGGCCTTGCAGGGGTCTTCTAGGGAGACAACAGCCCTGTCTCAAAACCGGCTTGACAGCTC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=1042285.000000 s hg38.chr19_GL949747v2_alt 459976 1457 + 729520 CCATGTACCAGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGGATCGCTCTTCCTCACACCACAAATCTGAACATGCCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGGAGAGAAGACACACTCCTTTGCTTAGCCCACAATTCTCTATTTCacttgacccctgcccacctctccaactgaactggcttacttcctagt-ctacttgaggctgcaatcacactgaggaactcacaattccagacatacaagaggctccctcttaacatggcactgagacacgtgctgttccaccttccctcatgctgtttcacctttcctcAGACTATTTTCCAGCCTTCTGTCAGTCAGCAGTGAAACTTATAAA-ATTTTTTGTGATTTCAATGTAGCTGTCTCCTTTTCAAATAAACATGTCTGCCCTCATTGCTTTAGGTAATGTGACAC--TATTCGCTGAAAGAAACCGCTGttatcattaccatgtccacataaccccatctgttatccactgggttctctcccctggactctgagcttctggaagcagggtggagcctcatttgtctctgggactccaatttccatccaaagatgcagcacataggaggtTCCAAGGATCATGAATCACATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCATGGGGACACATATCAACACATCATCTTTCATGCTATATATATATATAcagtcgctcctccgtatctgtggggtttacaggtgtttattgaaccaactataaataaaaaatattcagagaagaaaatccacaaactttcaaaaagcaaaactatgttgaagggacacaaatgaagcagtgtgtaggccatatcaggaattataagtaatctagagatgatttcatgtatacaggaggatgtgcatgggttatatgcaagcgctgtgccatttcatgtaagaggcttcagcatctgcagattttggtatctgagtggagatcctgaaaccaatcacccaggaatagtgaaggatgaccgTATAAAACTGTTATTTCTAAATTTTAAATATAAATCATAAAAAAATTATA--AACTAGATAAA--AAC-AAGAAGTGTTTTtata-gtgtgagaataagtttagatttattttttcctacgtgtaaccctttggtttaatattatttattgagaagacattctatgccaccttaaaccacagggcagcctttgtcaactctaaagggactgtgtgtacacggatgtattttagacactgttt-ctgctaaggggctctctgtgtccacactcttgaggatgctgcacttcatgtagccttataaaaccctttaa-atttagtagccagagccctctaatttg----------------------------ttattATAGGCTACTTGCTA------tt s panTro4.chr19 59700480 1451 + 63644993 CAATGTACCAGCAGCTGGAATCTGAAGGCGCGAGTCTGCTTCTTAGAGCATCGCTCTCCCTCACACCACAAATCTG---GTGCCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCTTCCT-GAGAGAAAACACACTCTTTTGCTTAGCCCACAATTCTCCATTTCacttgacccctgcccacctctccagctgaactagcttacttcctagt-ctacttgaggctgcaatcacactgaggaactcacaattccaaacatacaagaggctccctcttaacatggcactgagacacgtgctgttccaccttccctcatgctgtttcacctttcctcAGACTATTTTCCAGCCTTCT----GTCAGCAGTGAAACTTATAAA-ACTTTTTGTGATTTCAATGTAGCTGTCTCCTTTTCAAATAAACATGTCTGCCCTCATTGCTTTAGGTAATGTGACAC--TATTCGCTGAAAGAAACCGCTGTTATCATTACCATGTCCACATAACCCCATCTGTTCTCTGCTAGGTtctcacccctggactctgagcttctggaagcagggtagagcctcatttttctctgggactccaatttccatccaaagatgcagcacataggaggtTCCAAGGATCATGAATCACATGAACAAGTGATATTCTTACTCTCTGCA-ACCTGGAAAGCTGGCAGAGTCACTCCACGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCATGGGGACACATATCAACACATCATCTTTCATAC----TATAAATATAcagtcggtcctccatatctgtggggtttacaggtgtttattgaaccaactataaataaaaaatattcagagaaaaaaatccacaaactttcaaaaagcaaaactatgttgaagggtcacaaatgaagcagtgtataggccatatcaggaattataagtaatcaagagatgatttcatgtatacaggaggatgtgcatgggttatacgcaaatgctgtgccatttcacttaagagg-ttcagcatctgcagattttggtatctgagtggagatcctggaaccaatcacccaggaatagtgaaggatgaccgTATATGACGTTTATTTCTCaattttaaatataaatcataaaaaaattataataaCTAGATAAA--AAC-AAGAAGTGTTTTtata-gtatgagaataagtgtagatttattttatcctatgtgtaaccctttggtttaatattatttattgagaagacattctatgccaccttaaaccacacggcagcctttgtcaactctaaagggactgtgtgtacacggatgtattttagacactgttt-ctgctaaggggctctctgtgtccactctcttgaggatgctgcactttatgtagccttatagaaccctttaa-atttagtagccagagccctctaatttg----------------------------ttattATAGGCTATTTGCTATGtttttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56607793 1447 + 60714840 CCATGTACCAGCAGCTGGAATCTGAAGACATCAGTCTTCATCTTAGGGGATCGCTCTTCCTCACACCACGAATCTGAACATGCCGCTCTCTTGCTTACAAATGTCTAA-GTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCGTAGCCCACAATTCTCCATTTCacttgacccctggccacctctccagcctaactggcttacttcctagt-ctacttgaggctgcgatcacactgaggaactcacaattccaaacatacaagaggctccctcttaacacggcacttacacacgtgctgttccacctcccctcatgctgttccacctttccacagactattttccagccttct----ctcggcagtgaaacttat--a-gttttttgtgatttcaatgtagctgtctcctcttcaaataaacatgtctgccctcattgctttaggtaatgtgacactgtattcgctgaaagaaactggtgttatctttaccatgtccatataaccccatctgttctccactgggttctcacccctggactctgagcttctggaagcagggtggagcctcatttgtctctgagactccaatttccattcaaagatgcagcacacaggaggttccaaggatggtgaatgagatgaaCAAGTGATATTCTTACTCTCTGCAGACCTGCAAAGCCGGCAGAGTCATTCCACGATGAAACATTTGCAGAGTCACAGGTCTTGTTAGTCTCATCTCCACGGGGACACATATCAACACATCATCTTTCATAC----TATAAATATAcagtcactcctctgtatctgtggggcttacaggtgtttattgaaccaagtataaatcaaaaatatgcagagaa-aatatccacaaactttcaaaaagcaaagctatgttgaatggacagaaatgaggtggtgtgtaggttgtatcaggaattataagtaatcaagagacgatttaatgtatacaggaggatgtgcatgggttatatccaaatgccgtgtcattttatgtaagaggcttgagcatctgcagattttggtatctgagtggagatcctgaaaccaatcactcacgaatagtgaaggatgactgTATATGACTTTTATTTCTCAAATTTAAATATAAATCATAAAAAATGTACAATAACTAGATAAA--AACTAAgaagtgtttttataggtgtgagaataagtgtagatttattttttcctatgtgtaaccctttggtttaatgttatttattgagaagacgttctatgccaccttagaccacacggcagcctttgtcaagtataaagagactgtgagtacaaggatgtattttagatcctgttt-ctgctaaggggctctctgtgtccacactcttgaggacgctgcactttatgtagccttatagaaccctttaa-atttcgtagcgagagccctctattttg----------------------------ttattATAGGCTATATGC---------- i ponAbe2.chr19 I 7597 C 0 s papAnu2.chr19 47773104 1460 + 51301725 CAATGTACCAGCCGCAGGAATCAGAAGGTGTGAGTCTGCATCTTAGGGCATTGCTCTTCCTCAGACCACGAATCCAAACGTGCCTCTCTCTCGCTTACAAATGTCTGTGGTTCCCACTGCCTGCTGCAGGGAAAATACACTCCTTTGCTTAGCCCACAATTCTCCATTTCACTTGacccctgcccacctctccaaTCTAACTGGCTTACTTCCTAGTCCTACTGGAGGCTGTGATCACACTGAGGAACTCACAGTTCCAAACACACAAGAGACTCCCTGTTAACACAGCACTTAGACG--------------------CATGCTGTTCCATCTCCCCTCAGACTATCTTTCAGCCTTCT----GTCAACAGTGaaacttataaattttttttatcatttcaatgtAGCTCTCTCCTCTTCAAATAAACACCTCTGCCCTCATC-CTTTAGGTAATGTGACTCTTTATTCGCCGAAAGTTTCTGGTGTTATCATTACTATGTCCATATAACCCCATATGTTCTCCACTGGGTTCTCACCCCTGCAATCTGAGCTTCTGGAAG--AGGTGGAGCCTGATTAGTGTCTGGGACTCCAATTTCCATCCAACGATGCAGCACGTAGGCGGTTTCAAGGATCAGGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACACCTGTAGAGTCATAGGCCTTGTTGGTCTCATCTCCACGGGGACACATGTCCACACATCATCTTTCATAC----CATAAATACACAGTCGCTCCTCCAGACCTGTGGGGTTTACAGGTGTTTGTTGAGCCAACtataaatcaaaaatattcagagaa-aaaatccacaaagttccaaaaagcaaaactatgttgaatgaatacaaatgAAGCAGTGTGTAGGCTGTATccggtattataagtaatctagagatgatttcatGGACACAGGAGGATGAGCATGGGTCATATGCAAACGCTGTGCCATTTCATGTAAGAGGCTTGAGCACCTgcaggttttggtgtcagagcAGAGATCCTGAAACCAATCACCCGCGAATAGTGAAGGACgactgtatataatttttattcatgaattttagaaataaatcct-CAAAATGCACAATAATAAGATAAAACAAT-AAGCAGTGTTTTTACA-GTGTGAAAATAAgcttagatttattttttcctacgTGTAACCCTCTGGTCCAATGTTATTTATGGAGAAGACATTCTTTTCTACCTTAACCCACACGGCAGCCTCTGTCAACTATAAAGGGACTTTGTGTACACGGATGTATTTT--ACACTCTTTCCTGCTTAGTGGCTCTCTGTGTCCACTCTCACGATGATGCTGCACCTTATGTAGCCTTAGAGAACCCCTTAACATTTGGTAGCCTGAATCCTCcaatttctccttcctctttaagattgccattattattattataggttatttgct---ttt--- i papAnu2.chr19 C 0 T 64901 s chlSab2.chr6 47445581 1453 + 50890351 CAATGTACCAGCAGCAGGAATCCGAAGGTGTGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACAAATCTGAACGTGCCTCTCTCTTGCTTACAAATGTCTAAGATCCCCACTGCCTGCTGCAGAGAAAACGCACTCCTTTGCTTAGCCCACAATTCTCCACTTCACTTGACCCCTGCCCACCTCTCCAACCT-ACTGGCTTACTTCCTAGTCCTACTGGAGGCTGTGATCACACAGAGGAACTCACAATTCCAAACATACAAGAGGCTCCCTCTTAACACAGCACTTAGACATGTGCTGTTCCACCTTCCCTCATGTTGTTCCACCTCCCCTCAGATTATCTTTCAGCCTTCT----GTCAACAGTGAAACTTATAAA-TTTTTTTAACATTTCAACGTAGCTCTCTCCTCTTCAAATAAACACATCTGCCCTCATC-CTTTAGGTAATGTGACTCTTTATTCACCAAAAGTTTCCGGTGTTATCATTACTATGTCCATATAACCCCATATGTTCTCCAATGGGTTCTCACTCCTGGACTCTGAGCTTCTGGAAGC-AGGTGGAGCCTGGTTTCTGTCTGGAACTCCAATTTCCATCCAACGATGCAGCGCATAGGAGGTTGCAAGGATCGTGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCAACTCCACGGGGACACATGTCCACACGTCATC-TTCATAC----CATAAATACAcagtcgctcctccagacctgtggggtttacaggtgtttattgaaccaactataaatcaaaaatattcagggaa-aaaatccacaaagttccaaaaagcaaaactgtgttgaatggacacaaatggaatggtgtgtaggctgagtcaggaattataagtaatctagagatgatttcatgtacacagaaggatgagcatggattatatgccaacgctctgccattttatgtaagaggcttgagcacctgcagattgtggtatctgagtggagatcctgaaaccaatcacccacgaatagtgaagcacgactgTATCTAACTTTTATTTCTCAATTTTAAATATGAATCATAAAAAATTTACAACAAGAAGATAAAA-AAC-AAGAAGTG-gtttata-gtgtgagaatacgtatagatttatttttttctatgcgtaacgct-tgggcccatgttatctatggagaagacattctattcctccttaaaccacacggcagtctttgtcaactctaacgggactgtgtgtgcacggatgtattttagacactgttttctgataaggggctctctgtgttcgctcttttgaggatgctgcacattatgtaggcttatacaaagccttaaaatttggtagctggagtcctttagtttC----------------------------TTATTATAGGCTATTTGCTACGCtt--- i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=501629.000000 s hg38.chr19_GL949747v2_alt 461433 1038 + 729520 ttttt---tttcttaaggcggaatcttgctctgtcacccaggctggactgtagtagtgcaatctcagctcactgcaaactccgcctcccaggttcaagcgattctcgtgcctcagcctcttgagtagatggcattacaggtgtctgccaccaggcacggctaatttttgaatgtttagcagagacacggtttcactatgttggccaggctgctctcaaactcctcatctcagttgattcgcccacctcggcttccaaacatgctgggGGAAACTTGATTTTCTATAGCATTATGTTACTGGATATTTCCGTAAAATTTAAAATGAGGGAGGGACAGAGACAGAGAGGGAGCAAACTCCAGAGTTGGGACTCTGGAATCTTGGGTCATGAGACAAATTATAGATAAAACTATAAAAATCCAGAATTTACATG-TGTGGTTTTTGCTGATAAAGTACAATTCGAAGATTGTAAATAATTGCATAATCCTTTCCTGGGAATTTAAATCATTTTAACTGGTTTTGCTGTAATACTAGAAATACAAGCATGAAAAATTCTAAT--GGTTTATTAGTCACAATGACTCCGAAAACATTAATAATACCTATTAGATACTTTGCATATTACACAGGAAGAAGAGTTTGAATCTCAGATAAAAACAATAAAAATACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGGCATCTTGTGTTCGGGAGGTTGGATCTGAGACGTGTTGTGAGTTGGTCATAGTGAAGGACGCGAGGTGCCAATTCTAGTGAGAACAATTTCCAGGAAGCCGTGTTCCGCTCTTGAGCAAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCGTGATGTGGTCAACATGTAAACTGCATGGGCAGGGCGCCAAATAACATCCTGTGCGCTGCTGAGCTGAGCTAGGGGTGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCATCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATAGAGGGAGGGAGCG s panTro4.chr19 59701931 1039 + 63644993 ttttt---tttctagaggcggagtcttgctctgtcacccaggctggactgcagtggtgcaatctcagctcactgcaacctccgcctcccaggttcaagcgattctcgtgcctcagcctcttgggtagctggcgttacaggtgcctgacaccaggcacagctaatttttggatttttagcagagacacggtttcactctgttggccaggctgctctcaatctcctcatctcagttgatccgcacacctcggcttcccgacgtgctgggGGAAACTTGATTTTCTATAGCATTATGTTACTGGATATTTCTGTAAAATTTAAAATGAGGGAGGGAGAGAGACAGAGAGAGAGCAAACTCCAGAGTTGGGACTCTGGAATCTTGGGTCATGAGACAAATTTTAGATAAAACTACAAAAATCCAGAATTTACATG-TGTGGTTTTTGCTGATAACATACAATTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAATTTAAATCATTTTAACTGGTTCTGTTGTAATACTAGAAATACAAGCATGAACAATTCTAATGAGGTTTATTAGTCACAGTGACTCTGAAAACATTAATAATACCTATTAGATATTTTGCATATTACACAGGAAGAAGACTTTGAATCTCAGATAAAAACAATAAAAATACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGTCATCTCGTGTTCAGGAGGTTGGATCTGAGACGTGTTTTGAGTTGGTCATAGTGAAGGATGCGAGGTGTCAATTCTAGTGAGAACAATTTCCAGGAAGCCGTGTTCCGCTCTTGAGAGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCATACGTCACCCTCCCATGATGTGGTCAACATGTAAACTGCATGGGCAGGGCGCCAAATAACATCCTGTGCGCTGCTGAGCTGAGCT-GGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGCCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATAGAGGGAGGGAGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56609240 1036 + 60714840 ttttt---tttcttgaggtggagtcttgctctgtcgcccaggctggactgcagtggcacaatctcagctcactgcaacctccgtctcccaggttcaagcgattctcgtgcctcagcctcttgagtagctggcattacaggtgcctgccaccaggcatggctaattcttgaatttttagcagagacacggtttcactatgttggccaggctactctcaaactcttcatctcagtcgatccgcccacctcggcttcccaacgtgctgggGGAAACTTGATTTTCTATAACATTATGTTACTGGATATTTCTGTAAAGTTTAAAATGAGGGAGGGAGAGAGACAGAGAGAGAGCAAACTCCAGAGTTGGGACTCTGGAATCTTGGGTCATGAGACAAATTTTAGATAAAACTACAAAAATCCAGAATTTACATGTTGTGG--TTTGCTGATAAAGTACAATTCTAAGAAAGTAAATAATTGCATAATCCTTCCCTGGGGACTTAAATCACTTTAACTGGTTCTGCTGTAATACTAGAAATACAAGCATGAAAAATTCTAAT--GGTTTATTAGTCACAACGACTCTGAAAACCTTAATAATACCTATTAGATATTTTGCATATTACACAGGAAGAAGAGTTTGAATCTCAGATAAAAACAATAAATATACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGGCATCTCGTGTTCGGGAGGTTGGATCTGAGACGTGTTTTGGGTTGGTCATAGTGAAGGACGCGAGGTGTCAATTCTAGTGAGAACAATTTCCAGGAAGCCATGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGTGTACGTCACCCTCCCATGATGTGGTCAGCATGTAAACTGCATGGGCAGGGCGCCAAATAACATCCTCTGCGCTGCTGAGCTGAGCT-GGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCATCAGCATGGCGTGTGTTGGTGAGTCCTGGAAAGGAATCAAGGGAGGGAGTG i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47447034 1040 + 50890351 tttttatatttcttcaggcagagtctcgctctgttacccaggctggactgcagtggcacaatctcggctcactgcaacttccgcctcccaggttcaagcgattctcctgcctcagcctcttgagtagctggcatgacaggtgcccactgccaggcatggctaatttttgtatgtttagcagagacatggtttctctaagttggccagggaggtctcgaactcccgacctccgttgatccacccacctcggcttcccaaagtgctgggGGACACTTGATTTCCTACAGTATTATGTTACTGGATATTTCCACACAATTTAAAATgagggaggcagagagacagagagagagcgaAC-CATGTGCTGGGACTCTGGAATCTCAGGTCATGAGACAAATTGTAGATAAAATGACAAAAATCCAGAATTGACATGTTGTGGGTTTTGCTGATAAAGAACAGTTCTAAGACTGTAAATAATTGCATAATCCTTCCCTGGGTATTTAAATCATTTAAACTGGTTCTGCTGTCATACTAGAAATACAAGCATGAAACATCCTAAT--GGTTTATTCGTCACAATTGCTCTGACAACGTTCATAATACCTATTAGATATTTTGCATATTACACACGGAGAAGAGTTTGAAACACAGATAAAAACAACAAAAATACGTGAAAAGTCTTTCACGTCAGCACAGATTTTAGTCACCTCGTGTCCGGGAGGTTGGATTTGAGACGTGTTTTGAGCTGGTCAGAGTGAAGGACGCAAGGTGTCAGTTCTAGTGAGAACCATTTCCAGGAAGCCATTTTCCCCTCTTGAGTGAGCACCCGCTGCGCCTCATGCAAGGTAGGAAGAGTCTGCGTACGTCACCCTCCCATGATGTGGTCAGCACGTCAACTGCATGGGCAGGGCGCCAGATAACATCCTGTGCGCTGCTGAGCTGAGCT-GGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATCGACAGAGGAAGCG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e papAnu2.chr19 47774564 64901 + 51301725 T e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=51056.000000 s hg38.chr19_GL949747v2_alt 462471 74 + 729520 CGGGGATGGAGATCTGGGCCCAGAGGTGGAGATATAGGCCTGGAGGTGGAGTTATGGGCCTGGAGTGGAGATCT s panTro4.chr19 59702970 74 + 63644993 CGGGGATGGAGATCTGGGCCCAGAGGTGGAGATATGGGTCTGGAGGTGGAGTTATGGGCCTGGAGTGGAGATCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610276 74 + 60714840 CGGGGATCAAGATCTGGGCCCAGAGGTGGAGATATAGGCCTGGAGGTGGACTGATGGGCCTGGAGTGGAGATCT i ponAbe2.chr19 C 0 T 7385 s papAnu2.chr19 47709663 73 + 51301725 CAGGAGTGGAGACCTGGGCCAGGA-GTGGAGATATGGGTCTAGAGGTGGCATTacgggcctggagtggagatct i papAnu2.chr19 T 64901 C 0 s chlSab2.chr6 47448074 71 + 50890351 CTGGGGTGGAGATCTGGGCCTGG--GTGGAGATCTGGGCCTGGAGG-GGAGATATGGGCCTGGGGTGGAGATCT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=4353.000000 s hg38.chr19_GL949747v2_alt 462545 8 + 729520 GGGCCTGG s panTro4.chr19 59703044 8 + 63644993 GGGCCTGG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47709736 8 + 51301725 gGGCCTAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47448145 8 + 50890351 GGGCCTGG i chlSab2.chr6 C 0 T 58382 e ponAbe2.chr19 56610350 7385 + 60714840 T e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=573.000000 s hg38.chr19_GL949747v2_alt 462553 2 + 729520 AG s panTro4.chr19 59703052 2 + 63644993 AG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47709744 2 + 51301725 AG i papAnu2.chr19 C 0 C 0 e ponAbe2.chr19 56610350 7385 + 60714840 T e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e chlSab2.chr6 47448153 58382 + 50890351 T e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=1322.000000 s hg38.chr19_GL949747v2_alt 462555 5 + 729520 -GGGAT s panTro4.chr19 59703054 5 + 63644993 -TGGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56602965 5 + 60714840 -TGGAG i ponAbe2.chr19 T 7385 C 0 s papAnu2.chr19 47709746 6 + 51301725 GTGGAG i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e chlSab2.chr6 47448153 58382 + 50890351 T e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=40841.000000 s hg38.chr19_GL949747v2_alt 462560 63 + 729520 ATATGGGCCTAGAGATGGAGTGATGGGCCTAGAAGTGGAGATCTGGGTCTGGAGTGGAGATAT s panTro4.chr19 59703059 63 + 63644993 ATATGGGCCTAGAGATGGAGTGATGGGGCTAGAAGTGGAGATATGGGTCTGGAGTGGAGATAT i panTro4.chr19 C 0 T 27628 s ponAbe2.chr19 56602970 61 + 60714840 ATATGATCCTGGAG-TGGAGGTATGGGCCT-GGGGTGGAGATACAGGCCTGGAGCAGAGATAC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47709752 62 + 51301725 ATATAGGTCTAGAGGTGGAGttatgggcctgga-gtggagatctgggcctggagtggagatat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389771 63 + 50890351 ATATGGGTCTAGAGGTGGAGATATGGGCCTAGAGGTGGAGATATGGGCCTGGAGTGGAGATAT i chlSab2.chr6 T 58382 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=13447.000000 s hg38.chr19_GL949747v2_alt 462623 118 + 729520 GGGCCTGCAGTGGAGATATGGGCCTGGAGTGGAGAGAGGAACCTGGA-GAAGAGATAGGAACCTGGATG-GGAGGTAGGAGCCTAG-GGTGGAGATATGGGACTGGAGTGGAGATATGGGA s ponAbe2.chr19 56603031 118 + 60714840 AAGCCTTGAGTGGAGATATGGGCCTGGAGTTGAGAGAGGAGCCTGGA-GTGGAGTTATGGGCCTGGAGT-GGAGACATCAGCCTGG-AGAGGAGATATGGGCCTGGAATGGAGATTCAGAC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47709814 121 + 51301725 ggtCCTGGAGTGGAGATCtcagcctggagtggagatatgggtCTAGAGGTGGAGATATGGGCCTAGAGGTGGAGATACGGGTCTAGAGGTGGTGttatgggcctggagtggagatctgGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389834 37 + 50890351 GGGCCTGGAGTGGAGATC-------------------------------------------------------------------------------TGGGCCTGGAGTGGAGATC----- i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T e panTro4.chr19 59703122 27628 + 63644993 T a score=33771.000000 s hg38.chr19_GL949747v2_alt 462741 64 + 729520 CTGGAG---------------------TAGAGATATGGGCCTGGAGTGGAGTTATGGGCCTGGAGTGAAGTTATGGGCCTGGAGG s panTro4.chr19 59675494 64 + 63644993 CTGGAG---------------------TGGAGACATGGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAGG i panTro4.chr19 T 27628 T 32633 s ponAbe2.chr19 56603149 64 + 60714840 CTGAAG---------------------TGGAGATCTGGGCCTAGAGTGGAGATCTGGGCCTGTTGTGTAGATCTAGGCCTGGAGG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47709935 84 + 51301725 CTAGAGGTGGAGATACAGGTCTAGAGATGGAGttatgggcctggagtggagatctgGGCCTTGAGTGGAGATAtgagcctgga-g i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389871 50 + 50890351 -----------------------------------TGGGCCTGGAGTGGAGATATGGGCCCGGAGTTGAGATATGGGCCTAGAGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=10736.000000 s hg38.chr19_GL949747v2_alt 462805 14 + 729520 TGGAGATATGGGCC s panTro4.chr19 59642925 14 + 63644993 TGTAGATATGGGCC i panTro4.chr19 T 32633 C 0 s ponAbe2.chr19 56603213 14 + 60714840 TAGAGATCTGGGCC i ponAbe2.chr19 C 0 T 27493 s papAnu2.chr19 47710019 14 + 51301725 tggagatatgggtC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389921 14 + 50890351 TGGAGATATGGGCC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=9436.000000 s hg38.chr19_GL949747v2_alt 462819 24 + 729520 -TGGAGTGGAGATATGGGCCTGGAG s panTro4.chr19 59642939 24 + 63644993 -TGGAGTAGAGATATGGGCCTGGAA i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47710033 25 + 51301725 TAGAGGTGGAGATATGGGTCTACAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389935 25 + 50890351 TAGAGGTGGAGATATGGGTCTAGAG i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56603227 27493 + 60714840 T e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=32176.000000 s hg38.chr19_GL949747v2_alt 462843 47 + 729520 GTGCAGATATGGACCTGGAGTGGAGATATGGC-------------------CCTGGAGTGGAGATG s panTro4.chr19 59642963 47 + 63644993 CTGTAGATATGGGCCTGGAGTAGAGATATGGG-------------------CCTGGAGTGGAGATA i panTro4.chr19 C 0 I 32548 s ponAbe2.chr19 56575734 47 + 60714840 GTGGAGATTTGGGCCTGGAGTGGAGATATGGG-------------------CCTGGAGTGGAGATA i ponAbe2.chr19 T 27493 C 0 s papAnu2.chr19 47710058 66 + 51301725 ATGGAGttatgggcctggagtggagatctgggcctggagtgggGTTATGATCCTGGAGTGGAGATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389960 47 + 50890351 GTGGAGGTATGGGCCTGGAGTGGAGATATGGG-------------------CCTGGAGTGGAGATC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=5004.000000 s hg38.chr19_GL949747v2_alt 462890 11 + 729520 TGGGTCTGGAG s ponAbe2.chr19 56575781 11 + 60714840 CGGGCCTGGAG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47710124 11 + 51301725 TCGGCCTGGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47390007 11 + 50890351 TGGGCCTGGAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T e panTro4.chr19 59643010 32548 + 63644993 I a score=18571.000000 s hg38.chr19_GL949747v2_alt 462901 29 + 729520 TGGAGATATGGGCCTGGAGGTGGAGATAA s panTro4.chr19 59675558 29 + 63644993 TGGAGATATGGGCCTAGAGGTGGATATCT i panTro4.chr19 I 32548 I 27535 s ponAbe2.chr19 56575792 29 + 60714840 TGGAGATATGGGCCTGGAACTGTAGATAT i ponAbe2.chr19 C 0 I 34529 s papAnu2.chr19 47710135 29 + 51301725 TGGATATACGGGCCTAGAGGTGGAGTGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47390018 29 + 50890351 TGGAGATATGGGTCTAGAGGTGGAGATAT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=75116.000000 s hg38.chr19_GL949747v2_alt 462930 132 + 729520 GGGCCTGGAG-TGGAGATATGGGCCTGGA-GTGGAGATATGAGCCTGGAGATGGAGATATGGGCCTGGA-------------------GTGGAGATATGGGCCTGGAG---------------------------------------------------------------------GTGGAGATATGGGCCTGGA-GTGGAGATATGGGCCTGGAGTGGAGA s panTro4.chr19 59703122 133 + 63644993 GGGCCTGGAGGTGGAGATATGGGCCTAGA-GTGGAGATATGAGCCTGGAGATGGAGATATGGGCCTGGA-------------------GTGGATATATGGGCCTGGAG---------------------------------------------------------------------GTGGTGATATGGGCATGGA-GTGTAGATAtgggcctggagtggaga i panTro4.chr19 I 27535 C 0 s ponAbe2.chr19 56610350 131 + 60714840 GGGCCTGGAG-TGGTGTTACCGGCCTGCA-GTAGAGATATGGGCCTGGAG-TGCAGATATGGGCCAGGA-------------------GTGGAGATGTGGGTCTAGAG---------------------------------------------------------------------GTGGATATCTGGGCCTGGA-GTGGAGATATGGACCTAGGATGGAGA i ponAbe2.chr19 I 34529 T 35088 s papAnu2.chr19 47710164 220 + 51301725 GGGCCTGAAG-TGGAGGTATGGGGCTAAA-GTGGAGATAtgagcctgga-gtggagatatgggcctggaaTGAAGATATGGGACTGGAGTGGAGATAtgagcctggagtggagatacGGGCCAGTGGAGATACGGGCCAGTGGAGATATGGGTCTAGCATGGAGATCTGGGCCAGGAGGGGAGATATGGGTCTAGAGGTGGAGttatgggcctggagtggaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47390047 135 + 50890351 GGGCCTGAAG-TGGAGATATGGGCCTAGACGTGGAGATAAGGGCCTAGAGGtggagatatgggtctaga------------------ggtggagatatgggcctagag---------------------------------------------------------------------gtggaggtatgggtctagaggtggaggtatggGCCTGGAGTGGAGA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=12012.000000 s hg38.chr19_GL949747v2_alt 463062 27 + 729520 TATGGGCGTGGGGTGGAGATATGGGCC s panTro4.chr19 59703255 27 + 63644993 tatgggtctggagtggagatatgggcc i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47710384 27 + 51301725 tatgggcctggagtGATGAcgtgggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47390182 27 + 50890351 TATAGGCCTGGAGTGGAGATATGGGCC i chlSab2.chr6 C 0 I 79711 e ponAbe2.chr19 56610481 35088 + 60714840 T e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=55473.000000 s hg38.chr19_GL949747v2_alt 463089 132 + 729520 TTGAGTGGAGATATGGGACTGAAGTGGAGATATGGGTGTGGGGTGGAGATATGGGACTGGAGTGCAGATATGGGCATGGGGTGGAGATATGGGA----------------CTGGAGTGGAGATATGGGCGTGGGGTGGAGATATGGGA s panTro4.chr19 59703282 132 + 63644993 tgaagtggagatatgggactggagtggagatatgggcgtggggtggagatatgggactggagtggagatatgggcatggggtggagatatgggc----------------cgggagtggagatatgggcatggggtggagatatggga i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47710411 148 + 51301725 tggagtggagataagggcctggggtggagatatgggcctagagtggagatatgggcctggagtggagatttgggcctggagtggagatatgggccaGTGGAGATATGGGTCTGGCATGGAGATCTGGGCCAGGAGTGGAGATCTGGGC i papAnu2.chr19 C 0 I 36 s chlSab2.chr6 47469920 132 + 50890351 TAGAGTATAGATACGGGACTGGAGTGGAGATATGGGTCTGGAGTGGAGATCTGGGCCTGGGGTGGAGATATGGGCCTGGAGTGGAGATATGGGC----------------CTGGGGTGGAGATATGGGCCTGGGGTGGAGATATGGGC i chlSab2.chr6 I 79711 T 21827 e ponAbe2.chr19 56610481 35088 + 60714840 T e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=8422.000000 s hg38.chr19_GL949747v2_alt 463221 20 + 729520 CTGGAGTGGAGATATGGGCG s panTro4.chr19 59703414 20 + 63644993 ctcgagtggaaatatgggca i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47710595 20 + 51301725 ctggagtggagatatgggcc i papAnu2.chr19 I 36 C 0 s chlSab2.chr6 47448225 20 + 50890351 CTGGAGTAGAGACATGAGCG i chlSab2.chr6 T 21827 C 0 e ponAbe2.chr19 56610481 35088 + 60714840 T e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=43791.000000 s hg38.chr19_GL949747v2_alt 463241 60 + 729520 TGGGGTGGAGATATGGGCCTGGAGTGGAGATATGGGACTGGAGTGGAGATATGGGCGTGG s panTro4.chr19 59703434 60 + 63644993 tggggtggagatatgggccgggagtggagatatgggcgtcgggtggagatatgggCCGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575393 60 + 60714840 TGGGGTGGAGATCTGGGCCTCGAGTGGAGATATGGGCCTGGAGTGGAGATATAGGCCTGG i ponAbe2.chr19 T 35088 I 55520 s papAnu2.chr19 47710615 60 + 51301725 tggggtggagatatgggcctgggatGGAAATATGGGCCTAGAGTGGAGATCTGGGCCAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47448245 60 + 50890351 TGGAGTGGAGATACGGGTCTAGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGTTTGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=22243.000000 s hg38.chr19_GL949747v2_alt 463301 59 + 729520 GGTGGAGATATGTGCCTGG-AGTGGAGATATGGACGTGGGGTGGAGATATGGGCCTGGAA s panTro4.chr19 59703494 59 + 63644993 AGTGGAGATATGGGCATCG-GGTGGAGATATGGGACTGGAGTGGAGATATGGGCCTAGGA i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47710675 60 + 51301725 AGGGGAGATATGGGTCTAGAGgtggagttatgggcctggagtggagatatgggcctggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47448305 59 + 50890351 TGTGGAGATATGGGCCTAG-GGTTGAGATATGGGCCTGGAGTGGAGATATTAGCCTGGAT i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56575453 55520 + 60714840 I e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=51754.000000 s hg38.chr19_GL949747v2_alt 463360 83 + 729520 TGGAGATATGGGCCTGGAGTGGAGATATGGGCGTGGG-GTGGAGATATGGGACTGGAGTGGAGATATGGGCCTGTTGTGGAGAT s panTro4.chr19 59703553 84 + 63644993 TGGGGATATGGGCCTGGAATGGAGATATGGGCCTGGGTGTGTAGATATTGGACTGGAGTGGAGATATGGGCCTGATGTGGAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630973 83 + 60714840 TGGAGATCTGGGCCTGGAGTGGACATCTGGGCCTGGA-GTGGAGATCTGGGCCTGGAGTAGAGTTACGGGCCTGCAGTAGAGAT i ponAbe2.chr19 I 55520 C 0 s papAnu2.chr19 47710735 83 + 51301725 tggagatatgggcctggagtggagatctggacctgga-gtggagatatgggccaGGAGtggagatctgggccaggaggggagat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47448364 83 + 50890351 TGGAGATAAGGGTTTGGAGTGGAGATATGAGCCTGGA-GTACAGATATGAGCCTGGAGTGGAGATATCAGCATGGAGCGGACAT i chlSab2.chr6 C 0 I 21853 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=19656.000000 s hg38.chr19_GL949747v2_alt 463443 37 + 729520 ATGGGCTTGGAGTGGAGATATGATCCTGGAGT-------------------GTAGT s panTro4.chr19 59703637 37 + 63644993 ACGGGCTTGGAGGGGAGATATGATCCTGGAGT-------------------GTAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631056 37 + 60714840 ATGGGCCTGGAGCGCAGATATGGGCCAGGAGT-------------------GGAGA i ponAbe2.chr19 C 0 T 20612 s papAnu2.chr19 47710818 37 + 51301725 atgggccaggaggggagatatgggccaggagg-------------------ggaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47470300 56 + 50890351 ATGGGCCTGGAGTGAAGATATGAGCCTGGAGGTGGAGATATGGGCTTGAGTGTAGA i chlSab2.chr6 I 21853 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=87376.000000 s hg38.chr19_GL949747v2_alt 463480 144 + 729520 TATGGGCCTGGAGGTGGAGATCTGGGCCCGGGGTGGAGATATGGGCCTGGAGT-GGAGATATGGGCCTGGGGAGGAGATATGGGCCTGGAGT-GGAGATATGGGCCTGG--------------------------------------ACTGGAGTTATGGACCTAG-GGTGGAGATCTGAGCCTG s panTro4.chr19 59703674 182 + 63644993 TATGGGCCTGGAGGTGGAGATCtgggcctggggtggagatatgggcctggggt-ggagatatgggcctggagtggagatatgggactggagt-ggagatatgggcctggggtggatatctgggcctggagaggagatatgggcctggagtggagatatgggcctag-ggtggagatctgagcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610481 144 + 60714840 TATGGCTCTGGCTGGGGAGATATGGGACTGGAGTAGAGATATGGGCCTGAAGT-GGAGATATGGGCTTGGGGTGGAGATCTGGGCCTGGGGT-GGAGATATGGGCCTGG--------------------------------------ATTGGAGATATGGGCCTAA-GGTGGAGATCTGTGCCTG i ponAbe2.chr19 T 20612 C 0 s papAnu2.chr19 47710855 145 + 51301725 tatgggTCTAGAGGTGGAGttatgggcctggagtggagatatgggcctggagc-GGAGATATGGGCCAGGAGCGGAGATATGGGCCAGGAGG-GGAGATATGGGCCAGG--------------------------------------AGGGGAGATATGGGTCTAGAGGTAGAGttatgggcctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47470356 147 + 50890351 TATGGGCCTGGAACTGTAGATATGGGCCTGCGGTGAAGATATGAGCCTGGAACTGTAGATATGGGCCTGGAGTGGAGATATGGGTGTGGAGGTGGAGATATGGGCCTAG--------------------------------------AGTGTAGATATGGGCCTGGAACTGTAGATATGGGCCTG i chlSab2.chr6 C 0 I 10938 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=17056.000000 s hg38.chr19_GL949747v2_alt 463624 40 + 729520 GATTGGAGATGTGGGCCCAGATTGGCTATATGGGCCTAGG s panTro4.chr19 59703856 40 + 63644993 gattggagatgtgggcccggattggCTATATGGGTCTAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610625 40 + 60714840 GATTGGAGATCCGGGCCTGGATTGGCGATATGGGCCTAGG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47711000 40 + 51301725 gagtggagatatgggcctggagtggagatacgGGCCTGGG i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e chlSab2.chr6 47470503 10938 + 50890351 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=31069.000000 s hg38.chr19_GL949747v2_alt 463664 72 + 729520 GTGGGAATATCAGCCTGGAGTGGAGATATGTGCCTGGAGTGGAGATATGGGCTTGGGGTAGGGATATGGGAA s panTro4.chr19 59703896 53 + 63644993 GTGGAAATATCGGCCTGGAGTGGAGATATG-------------------GGCTTGGGATGGGGATATGGACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610665 72 + 60714840 GTGGAAATATCGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCTTGGGGTGGGGATATGGACC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47711040 56 + 51301725 ATGGAAATATGGGCCTagagtggagatatgggcctggagtggagatctgggcctgg---------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47481441 71 + 50890351 GTAGAGATATCAGCGTGGAGTGGACATGTGGGCCTGTTGTGTAGATCTAGGCCTGGG-TGCAGATCTGGATC i chlSab2.chr6 I 10938 T 32979 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=17985.000000 s hg38.chr19_GL949747v2_alt 463736 43 + 729520 TGGAGGCTGGGTCTCTGCACAGCCGAGAGCCCTGTTCTTGGGT s panTro4.chr19 59703949 43 + 63644993 TGGAGGCTGGGTCTCTGCACAGCCGAGGGCACTGCTCTTGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610737 43 + 60714840 TGGAGGCTGGGTCTCTGCACAGCCAACAGCCGTGTTCTTCGGT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47711096 40 + 51301725 ---aggCCGGGTCTCTGCACAGATGAGAGCCCTGTTCTTGGGG i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e chlSab2.chr6 47481512 32979 + 50890351 T e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=607480.000000 s hg38.chr19_GL949747v2_alt 463779 803 + 729520 GCAGGTAGGCACTGAGGGTGAGTTTCCCTTCGGCCCAGGAAGGGCCTGGCTACCAAGACTCACAGCCTAGTGGGGATAGCAAGGAAGG-CCTGGTTTGCCTGCAGATGGATGGTCCATCATGATCTTTCTTTCCAGCGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGAGGGTAAGTCCTTCTCCAAACCTTAAGGTGTCATCTCCCCACATAAGAGGATTTTCCTGAAACGGGAGGGAAGTCCTGTCAGGGAGTCTCTCTTAAACTAGAAAGAGGGGACCCTGGGGTGCTTGGCCCACAGTTCCGACCTTG-CCTCCCTGGCCTTTCATTTCCTTGGCAGAGTCAAGTTCTGTGGGGACCAGGGTTACACTAGGGTGCTCAAAGCTGGGGTGTGTGGTGGGAA---------------------------------AGTGGTAGGAACAGCAGATCCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCGTTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGT-GGGAAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCAGTTGTTTATTTTCATTCAGGCATCTGCTGATATTCCATTCTCAAAGGACATGCCCTCCACCCCATGTCTACCCTGTGTTGTTTTATGTGAGTAATCTTACAGTATTAAAATCTAGTAGGAGTCTCTTACTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTGTTGTAGGGAGACAGCTTGTCTTTGTGGGATGAGTCCTTCCTTTAGCCCTAGGCACCAAGGTGTGATAGCAGCCA s panTro4.chr19 59703992 802 + 63644993 GCAGGTAGGCACTGAGGGTGAGTTTACCTTCAGCCCAGGAAGGGGCTGACTACCAAGACTCACAGCCCAGTGGGGGCAGCAAGGAAGG-CCTGGTTTCCCTGCAGATGGATCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCTTGGCCACATGAGGGTAAGTCCTTCTCCAAACCTTAGGGTGTCATCTCCCCACATAAGAGGATTTTCCTGAAATGGGAGGGAAGTCCTGTCAGGGAGTCTCTCATAAACTAGGAAGAGGGGACCCTGGGGTGCTCGGCCCACAGTTCCGACCTCG-CCTCCCCGGCCTTTCATTTCCTTGGCAGAGTCAAGTTCTGTGGGGACCAGGGTTAGACTGGGGTGCTCAAAGCTGGGGTGTGTGGTGGGGA---------------------------------AGTGGTGGGAACAGCAGATCCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCGTTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGT-GGGAAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCAGTTGTTTATTTTCGTTCAGGCATCCACTGATAT-CCATTCACAAAGGACATGCCCTCCACCTCATGTCTACCCTGTGTTGTTTTATGTGAGTAATCTTACAGTATTAAAATCTAGTAGGAGTCTCTTACTCAGCACTTGCTCAAAGTTCTCAGCTGACGCTTTTGTTGTAGGGAGACACCATGTCTTTGCGGGATGGGTCCTTCCTTCAGCCCTGGGCACCAAGTTGTGATAGTAGCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610780 800 + 60714840 GCAGGTAGGCAGTGAGGGTGAGTTTACCTTCAGCCCAGCAAGGGCCTAGTTGCCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGAGG-CGTGGTTTGCCTGCAGATGGATCGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGAGGGTGAGTC---CTCCAAACCTCAGGGTGTCATCTCCCCACATAAGAGGATTTCCCCAAAATGGGAGGGAAGTCCTGTCGGGGATTCTCTCATAAACTAGGAAGAGGGGACCCTGGGCTGCTCGGACCGCAGTTCTGACCTCG-CCTCCCTGACCTTTCATTCCCTTGGCAGAGTCAGGTTCTGTGGGGAGCAGGGTTAGACTGGGGTGCTCAAAGCTGGGGTGTGTGGTGGGGA---------------------------------AGTGGTAGGAACAGCAGATCCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCATTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGT-GGGAAACCACAGCCATGGCCGTGACATTCCAAATCCTCTGACGGGGGCTCCGTTGTTTATTTTTGTTCAGGCATCCACTGATATTCCATTCACAAAGGACATGCCCTCCACCCCATGTCTACCTTGTGTTGTTGTATGTGAGTAATCTTACAGTATTAAAATCTAGTAGGAGTCTCTTACTCAGCACCTGCTCAAAATTCTCAGCTGACACTTTTGTTGTAGGGAGACACCATGTCTTTGTGGGATGGGTCCTTCCTTTAGCCCTGGGCACCAAGGTGTGATAACAGCCA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47711136 801 + 51301725 GCAGGTAGGCAGAGAGTGTGAGTTTACCTTCAGCCCAGGAAAAGCCTGGCTGCCAAGACTGACAGCCCAGTGGGGGCAGCAAGGGAGG-CCTGGTTTGCCTGCAGATGGATCGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGAGGGCCTGGCCACATGAGGGTGAGTCCTTCCCCAAACGTTAGGGTGTCCTCTCTCCATGTAAGAGGATTTTCCTGAAACAGGAGGGAAGTCCTGTCCAGGAGTCTCTCATCAATTAGGAAGAGGGGACGCTCGGATACTCAGCCCACAGTTCTGACCTCGCCCTCCCCAGCCTTTCTTTCCCTTGGCAGAGTCAAGTTCTGTGGGGACCAGGGTAAGACTGGGGTGCTCAAAGCTGGGGTGTGGAGGGGGGA---------------------------------AGTGCTAGGAACAGCAGGTCCTCTGAGGACATAGGTGTGACTCACACACTTGAGTGTTTCCATGAcggtcagggctgcagtgtggCTGCTGTCATTCTACCAGAAGAGGTGGGGAAACCACAGCCATGGCCCTGACATTCCAAATCCGCTGATGGGGGCTCAgctgtttatttttgttcaggCATCGGCTGGTATTCCATTCACAAAGGACATGCCCTCCACCCCATGTCTACCTTGTGTTGTTTTATGTGAGTCATCTTGCAGTATTAAAATCTAG---GAGTCGCTTACACAGCACTTGCTCAAAGTTCTCAGCTAACA-CTTTGTCGCAGGGAGACACCATGTCTTTGCGGAATGGGTCCTTCCTTTAGCCCTGGGCACCCAGGTGAGGTAGGAGCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47448533 826 + 50890351 GCAGGTAGGCAGCCAGGGTGAGTTTACTTTCAGCCCAAAAAGGGCCTGGCTGCCCAGACGCACAGCCCCGTGGGGGCAGCAGGGGAGGCCCTGGTTTGCCTGCAGATGGATCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGGTCCAGAGGGCCTGTCCACACACGGGTGAGTCCTTCCCCAAACCTTAGGGGGTCATCTCCCCACCTAAGAGGATTTTCCTGAAACAGGAGGGAAGTCCTGTCAGAGAGTCTCTCATACAATAAGAAGGGGGGACCCTGGGGTGCTCGGCTCACACTTCCGACCTCGTCCTCTCTGGCCTTTCTTACCCTTGGCTGAGTCAAGCTCTGTGAAGACCGGGGTGAGCTTGGGGTGCTCCAAGCTGAGGTGTGCAGGGAGGAAGTGGTGTCAGCGACTGAGGAAGGGAGGGAAGCAGTGCTAGGAACAGCAGGTCCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGTGTTTGCATGACGGTCAGGGCTGCAATGTGGCTGCTGTCATTCTACCAGAAGAGGTGGGGAAACCACAGCCATGACCCTGACATTCCAAATCTTCTGATGGGGGCTCA-------------GTTCATGCACTGGCTGATATTCCATTCACAAAGGACATGCCCTCCATGCCGTGTCTACTTTGTGGTGTTTTACGTGAGTCATCCTGCAGTATTAAAATCTAGTAAGAGTCCCTTATTCAGCACTTGTTCAAAGTTCTCAGCTGACACCTTTGTTGTAGGAAGATGCGGTGTCTATGTGGGATGGGTCCCTCCTGTAGCCCCGGACACCCAGGTGTGGTAGGAGCCT i chlSab2.chr6 T 32979 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e nomLeu3.chr10_GL398297_2_random 8308 4026 - 21488 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=8481.000000 s hg38.chr19_GL949747v2_alt 464582 8 + 729520 TAGAAATG s panTro4.chr19 59704794 8 + 63644993 TAGAAACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56611580 8 + 60714840 TAGAAACG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 12334 8 - 21488 TAGAAAGG i nomLeu3.chr10_GL398297_2_random I 4026 C 0 s papAnu2.chr19 47711937 8 + 51301725 TAGAAACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47449359 8 + 50890351 TAGAAACA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=65110.000000 s hg38.chr19_GL949747v2_alt 464590 61 + 729520 TGGAAAGTGGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCGGCTCCACATCCTCC----TCTC s panTro4.chr19 59704802 61 + 63644993 TGGAAAGTGAGGAGAATCTTCTGAGCACAGGGAAGGAGGGGTGACTCCATATCCTCC----ATTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56611588 58 + 60714840 TGGAAAGTGAGGAGAA---TCTGAGCACAGGGAGGGAGGGGCAGCTCCACATCCTCC----TCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 12342 61 - 21488 TGGAAAGTGGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCGGCTCCACATCCTCT----TCTC i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47711945 55 + 51301725 TGGAAAGCGAGGAGAATCTTCTGAGCACACGGAGGGTGGGGCGGCTCCG------CC----TCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47449367 60 + 50890351 TGGAAAG-GGGAAGAATCTTCTGAGCACATGGAGGGAGGGGCGGCTCCACATCCTCC----TCTC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102592240 55 + 122678785 TAGGAGGTGGGGGGAATCTTCCTACCCCCATG----------GTCAACACACTTTCCATGGTCTT i canFam3.chr1 N 0 C 0 e calJac3.chr22 45773030 49419 + 49145316 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=439673.000000 s hg38.chr19_GL949747v2_alt 464651 314 + 729520 TAAGG-CGGCGCCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTTTCTACCTGGCCCAGCCTTGTGGTGCCTCCAGA---ACATGTGACTCTTCGGTGTCACTCTAATCTTGGGTTTAA---------CAACTTCAGTCTGTACAAGGATGATGGGG--------TGCCTGTCCCTGAGCTCT----------ACAA--------CAGAATA-TTCTGGAAAAGCCTTTTCATGGGCCCTGTGACCCCGTCACACACAGGGACCTATAGATGCCGGGGTTCACACACACACTCCCCCAGTGGGGGGTCGGCACCCAGCAACCCCCTGGTGATCGTGGTCACAGGTCAGA s panTro4.chr19 59704863 314 + 63644993 TAAAG-CGGCGCCTCCTTCTCCCCAAGGTGGTCAGAACAAGCCCTTGCTGTCTGCCTGGCCCAGCCTTGTGGTGCCTCTAGG---ACATGTCATTCTTCAGTGTCACTCTTATCTTGGGTTTAA---------CAACTTCAGTCTGTACAAGGAAGGTGGGG--------TGCCTGTCCCTGAGCTCT----------ACAA--------CAGAATA-TTCTGGAACAGCCTTTTCATGGGCCCTGTGACCCCAGCACACACAGGGACATACAGATGTCGGGGTTCACACCCACACTCCCCCAGTGGGTGGCCGGCATCCAGCAACCCCCTGGTGATCGTGGTCACAGGTCAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56611646 314 + 60714840 TAAGG-CGGCACCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCTGCCTGGCCCAGCCTTCTGGTGCCTCCAGG---ACATGTGATTCTTCAGTGTCATTCTTATCTTAGGTTTAA---------CAACTTCAGTCTGTACAAGGAAGATGGGG--------TGCCTGTCCCTGAGCTCT----------ACAA--------CAAAATA-TTCTGGAACAGCCTTTTCATGGGCCCTGTGACCCCAGCACACGCAGGGACCTATAGACGTTGGTGTTCACACCCACACTCCCCCAGTGGGTGGTCGGCATCCAGCAACCCCCTGGTCATCATGGTCACAGTTCAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 12403 314 - 21488 TAAGG-CAGTGCCTCCTTCTCCCCAAGGTGGTGAGGTCAAGCCCTTGCTGTCTGCCTCGCCCAGCACTGTGGTGCCTCCAGG---ACATGTGACTCTTTGGTGTCATTCTTATCTTGGGTTTAA---------CAACTTCAGTCTGTACAAGGAAGACGGGG--------TGCCTGTCCCTGAGCTCT----------ACAA--------CTGAATA-TTCTGGAACAGCCTTTTAATGGGCCCTGTGACCCCAGCACACGCAGGGACCTACAGATGTTGGGGTTCACACCCACACTCCCCCACTGTGTGGTCTGCACCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAGA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47712000 311 + 51301725 TAAGG-CGGCGCCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCGGCCTGGCCCAGCCCTGTGATGTCTCCAGG-----ATGTGACTCTTTGGTGTCACTCTTATCTTGGGTTTAA---------CAGATTCAGTCCGTACAAGGAAGACGGGG--------TGCCTGTCCCTGAGCCCT----------ACAA--------CAGAATA-TTCTGGAACAGCTTCCTCATGGGCACTTTGATCCC-ACACATGCAGGGACCTACAGATGTGGGGGTTCACACCCGCACTCCCCCAATGGGTGGTTGGCTCCCAGCAACCCCCTGGTGATCACGGTCACAGGTCAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47449427 326 + 50890351 TAAGG-CGGCACCTCCTTCTCCCCCAGGTGATCAGGACAAGCCCTTCCTGTCTGCCCAGCCCAGCGCTGTGGTGCCTCAGGGAGGACACGTGACTCTTCGGTGTCACTATCGTCGTGGGTTTAACAACTTTACCAACTTCACTCTGTACAAAGATGACAGAA--------GCCACGTTCCCATCTTCC----------CCGG--------CAGAATA-TTCCAGCAGAGCTTCGTCATGGGCCCTGTGACCCCGGCACACGCAGGGACCTACAGATGTCGGGGTTCACACCCGCACTCCCCCACTGAGTGGTCGGCACTCAGCGACCCCCTGGCGATCAGGGTCACAGGTCAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45822449 335 + 49145316 TAACA-TGGTGCCTCCTTCTCTTCTAGGATATTACAGCAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGACCCCAGGAGGAAGCGTGACCCTCCAGTGTAGCTCACAGGTGGCATTTGA---------TGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACTGTGCCGGAGCTCCCAGCCCCGTACCCG--------TGGGTCG-TCCTGGGCCGTCTTCTCTGTGGGCCCTGTGAGCCCGAGTTGCAGGTGGACGTACAGGTGCTATGGTTATGACTCAAGCTCTCCCTATGTGTGGTCTTCACCCAGTGATCTCCTGGAGCTCCTGGTCCCAGGTGAGA i calJac3.chr22 I 49419 T 51452 s canFam3.chr1 102592295 318 + 122678785 TAACACCAGAGCTCTCTTTTCAACCAGGAGTTTATGCTAAGCCCTCACTCTCAGCCCAGCCCAGCCTGGCTGTGTCCCAAGGAGGGGATGTCACTCTACGATGTCAGAGTAAATACAGTTTTGA---------CCAATTCGCTCTGTACAAGGAGGGGGACA-----------------CTGAGCCCC----------ACAAGCAATCTGCAGAACAGTACTGGGCCAATTTCCCCATCACCGCAGTGACTGTTGCCCACAGTGGGATCTACCGATGCTATAGCTTTTCCAGCAAGTTCCCGTACCTGTGGTCAGCCCCCAGCGACCCCCTGGAGCTTGTGGTAACAGGTGAGG i canFam3.chr1 C 0 C 0 e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=76796.000000 s hg38.chr19_GL949747v2_alt 464965 57 + 729520 GGGCTCCTGTCTGGGATTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTAG s panTro4.chr19 59705177 57 + 63644993 GGGCTCCTGTCTGGGATTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56611960 57 + 60714840 GGGCTCCTGTCTGGCATTCTCTTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 12717 57 - 21488 GGGCTCCTGTCTGGGATTCTCCTTGTCCCACCTCCTAAGTCCCAGAGCTCCTGGTGG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47712311 57 + 51301725 GGGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGCTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47449753 57 + 50890351 GGGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGCTGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102592613 48 + 122678785 GAGATGCAGTCCAAGCCTTTCTTCTT--CAGCTCTTGCATAC-------TCTGGTGG i canFam3.chr1 C 0 N 0 e calJac3.chr22 45822784 51452 + 49145316 T e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=608868.000000 s hg38.chr19_GL949747v2_alt 465022 533 + 729520 GCATGTCCTTGAGGGTCCCTTCACGCAGGCCCTGACTGTATTTGGGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCtgtggtgggaagaataattgtccccagtgatgactacattctaatccctggagtctgtgactatttatgttataggggaagggactgaaggggaagatggagctcaggttgttgatgagttgaccttgagatggggagaaggcctggactgtccccctgggctcagtgtaatgacaagtgtccac-aggaaaggaggaggaagaggggagtggggattagagcagcgtaatgggagtctccatca----------gctttgaaggtggaggaaggccaggagccatgaatgcaggtggcctatagaggctggaaaagtcaaggaactgattctcctgagtctccagagggaacgaaaccctacaggtgccttgattttagcccaggaaaaacagggcccaacttctgcctccagaaatggaaggggtcagtgtgctctctcctgctgccatgctgctgataattt s panTro4.chr19 59705234 533 + 63644993 GCGTGTCCTTGAGGGTCCCATCAGGAAGGCCCTGACTGTATTTGGGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCGgtgctgggaagaataattgtccccaatgatgactacatactaatccctggagtctgttactatttatgttataggggaaggcactgaaggggaagatggagttcagattgttgatgagttgaccttgagatggggagacagcctggactgtcctgctgggctcagtataatcacaagggtccac-atgaaaggaggaggaagaggggagtggggattagagcagcgtaatgggagtctccacca----------actttgaaggtggaggaaggccatgagccatgaatgcaggtggcctatagaggctggaaaagtcaaggaactgattctcctgagtctccagagggaaagaagccctgcagatggcttgattttagcccaggaaaaccagggtccgatttctgtccccagaataggaaggtgtcagggtgctctctcctgctgccatgcttctgataattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56612017 533 + 60714840 GCGTGTCCTTGAGGGTCCCATCACCCAGGCCCTGACTGTATTTGGGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCtgtggtgggaagaacaattctccccaatgatgactacattctaatccctggagtctgtgactatttatgttataggggaagggactgaaggggaagatagagctcaggttgttgatgagttgaccttgagatggggagacagcttggaatgtcccggtgggctcagtgtaatcacaagggtctacaatgaaaggaggaggaagaggggagtggggattagagcagcgtaatgggagtctccctca----------gctttggaggtggaggaaggccgtgagccacgaatgcaggtggcctatagaggctggaaaagtcaaggaactgattctcctgagtctccagagggaatgaagccctgcaggtgccttgatttcactccaggaaaaaaagggtccgatttctctctctagaattggaagGAGTCAATGTGCTCTCTTCTGCTGCCAT-CTTCTGATAATTT i ponAbe2.chr19 C 0 I 20808 s nomLeu3.chr10_GL398297_2_random 12774 533 - 21488 GCGTGTCCTTGAGGGTCCCATCACGCAGGCCCTGACTGTATTTGGGGGAAAGGGGCATTGAATACAGGGAAAGAGGTGCtgtggtgggaagaataattgtccccaatgatgactacattctaatccctggagtctgtgactatttatgttataggggaagggactgaaggggaagatggagctcaggtggttgatgagttgaccttgagatggggagacaacctggactgtccctctgggcacagtgtaatcacaagggtccac-atgaaaggaggaggaagaggggagtggggattagagcagcgcaatgggagtctccatca----------gctttgaaggtggaggaaggccacgagccatgaatgcaggtggcctgtagaggctggaaaagtcaaggaactgattctcctgagtctccagagggaacgcagccctgcagatgccttgattttagcccaggaaaaacagggtccgatttgtgtctccagaagtggaaggggtcagtgtgttctctcctgctgccatgcttctgataattt i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47712368 532 + 51301725 GGGTGTCCGTCAGGATTTGGTCACCCAGGCCCTGACTTTATTTGGGGTAAAGGGGGATTGAATACATGGAAATGGGTGCTGTGGTGGGAAGAATAACTGTCCCCAAT-ATGGCTACATTCTAATCCCTGGAGCCTATGACTCTTTATGCTATAGGGCAGGGGACTGAAGGGGAAGACGGAGCTCTGGTTGTTGATGAGTTaaccttgagatggggagacGGCCTGGACTGTCCCGCTGGGCTCAGTGGAATCACAAGGGACCAC-ACGAGAGGAGAAGGATGAGGGGAGTGGGGATTAGAGCAGCGTCGTGGGAGACTCCATCC----------GCTTTGAAGGTGCAGGAAGCCCATGGGCCACCAATGCAGGTGACCTATAGAGTCTGGAAAAGTCAAGGAACTGATTCTCCCAAGTCTCCGGAGGGAACGCAGCCCTGCAgatgccttgattttagcccaggaAAAACAGGGTCCAATTTCTGTCTCCAGAAGTGGAAGGGGTCAGTGtgttctctcctgctgccttgctTCTGATAATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47449810 542 + 50890351 GGGTGTCCACAAGGGTCCCATCACCCAGGACCTGACTGTCTTTGGGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCtgtgatgggaagaataactgtccccaat-atggttacattctaatccctggagcctgtgactctttatgctatagggcaggggactgaaggggaaganggagctcaggttgttgatgagttgaccttgagatggggagacggcctggactgtcccactgggctcagtggaatcacaaggcaccaa-acgagaagaggaggaggaggagagtggggattagagcagcgttgtgggagagtccatcagccactgtgggctttgaaggtggaggaaggccacgagccacaatggcaggtggcctctacgggctggagaagtcaagagaaccgctctgttgagtctccagagggaacacagttctgtagatgacttgattttagcccaggaagaactggatccaatttctgtctccagaagtggaaggggtcagtgtgttctctcctgctgccatgtttgtgataattt i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45822784 51452 + 49145316 T e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=114512.000000 s hg38.chr19_GL949747v2_alt 465555 108 + 729520 tctacagcagcaacaggaaaccaacacCGGAACCCAGCTCGAGGAAAAGTTAAGAAAGGACACAAGGAtagccgggcgtggtggcaggtgcatgtaatcctagcgact s panTro4.chr19 59705767 108 + 63644993 tctacagcagcaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGTTAAGAAAGGACACAAGGAtagccgggcatggtggcaggtgcatgtaatcctagcgact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56633358 108 + 60714840 tctagagcagcaacaggaaaccaacacTGGAACCCAGATCAAGGACAAGTTAAGAaaggacacaaggatagctgggcatggtggcaggcccatgtaatcctagtggct i ponAbe2.chr19 I 20808 C 0 s nomLeu3.chr10_GL398297_2_random 13307 108 - 21488 tctacagcagcaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGTTAAGAAACGACACAAGGAtagccgggcgtaatggcaggcacatgtaatcctagcgact i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47712900 108 + 51301725 TCTACAGTGGCAACAGGAAACCAACACTGGAATCCAGGTCATGGATAAGTTAAGAAACGGCCCAAggatagccgggcgtggtcgcaGGCGCATGTAATCttagcgact i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47450352 103 + 50890351 tctgccgcagcaacaggaaaccaacacaGGAA-CCAGGTCAAGGACAAGTtaagaaa---ccaaacgatagccgggcatggtggtgggcgtgagtaaac-caacgact i chlSab2.chr6 C 0 I 6 e calJac3.chr22 45822784 51452 + 49145316 T e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=14865.000000 s hg38.chr19_GL949747v2_alt 465663 20 + 729520 tgggaggctgagggcaggag s panTro4.chr19 59705875 20 + 63644993 tgggaggctgagggcaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56633466 20 + 60714840 ccggaggctgagggcaggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 13415 20 - 21488 caggaggctgagggcagggg i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47713008 19 + 51301725 cgggaggctga-ggcaggag i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45822784 51452 + 49145316 T e chlSab2.chr6 47450455 6 + 50890351 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=666347.000000 s hg38.chr19_GL949747v2_alt 465683 580 + 729520 aatcacttgaacccaggagacagaggttgcagtgagcctagaccacaccacttcactccagcctgggcaaaggagtgagactctgtctccaa------------aaTTAATTAATTAAAGAAACCAAACAAGGAGAAGGTTGGCTACACCAAGATCAGCAAGTGAGGGATGATGATGCCACCACCAGGCTCCATCCACATAGGGAGCGGTTGATACTCCTCCAACCAGCACCAGGAGCCAGGCTATGGAAGCT--------------GGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATTCGACCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGATGTGCAGCCTATCCTGGTTCCTCTTCCACCCCCACATATACAGCAGGAAAGACATTAGTTCAAAATAGATACAACAGCCGAAGAGATGAGGCTGAGCCCAGCGGCAAGGGAATCAGAGGTTACTagagacagagggacagagaagagggagggagacagaTGGAAGGACCTGCACCAGGAGTTATGGGCACA s panTro4.chr19 59705895 579 + 63644993 aatcacttgaacccaggagacagaggttgcagtgagcctagaccataccacttcactccagcctgggcgaaggtgtgagactctgtctccaa------------aaTTAATTAATTAAAGAAACCAAACAAGGAGAAGGTTGGCTACCCTGAGATCACCAAGGGTGGGATGATGATGCCACCACCAGGCTCCATCCACATAGGGAGGGGTTGATACTCCTCAAACTAGCACCAGGAGCCAGCCTATGGAAGCT--------------GGCACAGGCATGGCAACAGTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATTCGTCCAAAGGAGATTGAACCAGGCTGCAAAGAACCTCGACGTGCAGACTATCCTGGTTCTTCTTCCACCCCCACATGGA-AGCAGGAAAGACATTAGTGTGAAATAGATACAACAGCCCAAGAGATGAGGCTGAGGCCAGTGGGAAGGGAATCAGAGGCTACTAGAGACAGAGGGACAGAGAAGAGCAGGGGAGACACATGGAAGGAACCGCACCAGGAGTTGTGGGCACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56633486 596 + 60714840 aaatgcttgaacccaggagacagaggttgcagggagccaagaccacaccaattcactccagcctgggcaaaggaatgagactctgtctccaa--------aaTTAATTAATTAATTAAagaaaccaaacaaggggaaggttggctaccctgagatcagcaagggtgggatgatgatgccaccaccaggctccatccacagagggaggggttgatgctcctccaaccagcaccaggagccagcctatggaagctggcaccatggagAAGGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACAGTGCTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATGCATCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGACGTGCCGCCTATCCTGGTTCGTCTTCCACCCCTACATAGACAGCAGGAAAGACATTAGTGTGAAATAGATACAACAGGCCAAGAGATGAGGCTGAGCCCAGTGGGAAGGGAATC--AGGCTACTAGAGACAGAGGGACAGAGAAGAGGGAGGAAGACGGATGGAAGGACCTGCACCAGGAGATATGGGCACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 13435 597 - 21488 aatcacttgaacccaggagacagaggttgcagtgagccgagaccacaccacttcactccagcctgggcgacggagtgagactctgtctccaa--------aaTTAATTAATTAATTAAagaaaccaaacagggagaaggttggctaccctgagatcagcaacggtggggtgatgatgccaccaccaggctccatccacatagggaggggttgatcctcctcaaaccagcaccaggagccaccctatggaagct-gcaccatggagaaggcaccgacatggcgagagTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTGCTGATCAGTTCATACCTCCTGCCAAGGATTCCAGTTCATCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGACGTGCAGCCTATCCTGGTTCCTCTTCCACCCCCACATAGACAGCAGGAAAGACATTAGTGCCAAATAGATACAACAGCCCAAGAGATGAGGCTGAGCCCAGTTGGAGGGAAATCAGAGGCTACTagagacagagggacagagaagagggagggagacagaTGGAAGGACCTGCACTGGGAGTTATGGGCACA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47713027 597 + 51301725 aatcgcttaaacccaggaagcagaggttacagtaagctgagaccacaccacttcactccagcctgggcgaaggagtgagactctctctccaa--------aattaattaattaattaaagaagcCAAACAAGGAAAAGGTTGGCAACCCCGAGATCAGCAAGGGCGGGACGCTGATGCCACCGCCAGGTTCGATCCACAAAGAGAGGGGCTGATAGTCCTCGAACCAGCACCAGGAACCACCCTATGGAAGCTGGCACCATGGAGAAGGCACAGGCATGGCAGGAGAGGCTCCCAATCCCCACCAGGAACAGGGAGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATATGT-CTGCCAAGGACTCCAATGTGTCTGAAAGAGATTGAACCAGCCTGCTAAGAGCCTGGACATGCAGCCTGTCCTGGTTCCTCTTCCACCCCCATGTAGACAGCCGGAAAGAGATGAGTGCGAAATAGATACAGCAGCCCAAGAGATGAGGCTGAGCCCAGTGGGAAGGGAATCAGGGGCTactagagacagagagacagagaagagggtgggagacagaaggaaggaCCTGAAACAGGAGTTAAGGGCACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47450461 601 + 50890351 aatcgcttgaatccgggaggcagaagttgcagtgagccaagaccacaccactatactcctgcctgggtgaaaaagtgacactctgtctcaaaaatcaattaattaatcaattaattaaAGAAATCAAACAAGGAGAAGGTTGGCAACTCCGAGATCAGGAAGGGCGGGACGCTGATGCCACCACCAGGCTCCATCCACATAGGGAGGGGTCGATGCTCCTAGAACCAGCACCAGGAGCCACCCTATGGAAGCTGAGGCCATGGAGAAGGCACAGGCATGGCAGGAGTGGCTCCCAATCCCCACCAGGAACAGGGAGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAGGGACTCCAGTTTGTCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGATATGCAGCCTG-CCTGGATCCTCTTCCACCCCCACATAGATAGCGGGAAAGAGATTAGTGGGAAACAGATACAACAGCCTAAGAGATGAGGCTGAACCCAGTGGGAAAGGCGTCTGAGGATACTAGAGACAGACGGACAGAGAAGAGGGAGGGACACAGATGGAGGGACCTGCACCAGGGGATAAAAG---- i chlSab2.chr6 I 6 C 0 e calJac3.chr22 45822784 51452 + 49145316 T e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=58738.000000 s hg38.chr19_GL949747v2_alt 466263 48 + 729520 GAAAAGAACATGAAGACACAGAGAGGAAGGAGAGAGACAGACACCAGG s panTro4.chr19 59706474 48 + 63644993 GAAAAGAACATGAAGACACAGAGAGGAAGGAGAGAGACAGACACCAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634082 48 + 60714840 GAAAAGAACATGAAGACACAGAGAGGAAGGAGAGAGACAGACACCAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 14032 48 - 21488 GAAAAGAACATGAAGACACAGAGAGGAAGGAGAGAGACAGACACCAGA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47713624 48 + 51301725 GAAAAGAAcatggagacacagagaggaaggagagagaaagacaccAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47451062 41 + 50890351 -------ACAGGGAGACACAGAGAGGAAGGAGAGAGACAGACAGCCGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19893276 43 - 122678785 GAGGGGACCATGGGGTCACAGGTCAGAAACTGAGAGGGTGAGG----- i canFam3.chr1 N 0 C 0 e calJac3.chr22 45822784 51452 + 49145316 T e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=565806.000000 s hg38.chr19_GL949747v2_alt 466311 408 + 729520 GAGGGGAAGCCTCACTCAATCCAGGTGCCATGGATGGGATGATAAAG------AGAGACACCTTCTAAATTC--------ACAAAC---------TCTCTTCCTAGGATTCCGCAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAGATGTCATGTTTGAGCACTTCCTTCTGCACAGAGAGGGG--------ACGTTTAACCACACTTTGCGCCTCATTGGAGAGCACATTGATGGGGTCT------CCAAGGGCAACTTCTCCATCGGTCGCATGACACAAGACCTGGCAGGGACC--TACAGATGCTACGGTTCTGTTACTCACTCCCCCTATCAGTTGTCAGCGCCCAGTGACCCTCTGGACATCGTGATCACAGGTGAGA------GTGTCCAGA-CATTCTTCTC s panTro4.chr19 59706522 408 + 63644993 GAGGGGAAGCCTCACTCATTCCAGGTGCCATGCATGGGATGATAAAG------AGACACACCTTCTAAACTC--------ACAAAC---------TCTCTTCCTAGGAGTCCACAGGAAACCTTCCCTCCTGGCCCACCCTGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCGGATGTCATGTTTGAGCACTTCCTTCTGCACAGAGAGGGG--------AAGTTTAACGACACTTTGCGCCTCACTGGAGAGCTCCATGATGGGGTCT------CCAAGGCCAACTTCTCCATCGGTCCCATGACGGAAGACCTGGCAGGGACC--TACAGATGCTACGGTTCTCTTACTCACTCCCCCTATCAGTTGTCGGCTCCCAGTGACCCTCTGGACATCGTGATCACAGGTGAGA------GTGTCCGGA-CATTCTTCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634130 408 + 60714840 GAGGGGAAGCCTCACTCATTCCAGTTGCCATGGATGGGATGATAAAG------AGAGATGCCTTCTAAACTC--------CCAACC---------TCTCTTCCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAGATGTGGTGTTTGAGCACTTCCTTCTGCACAGAGAGGGG--------GAGTTTAACGACACTTTGCGCCTCATTGGAGAGCTCCATGATGGGGTCT------CCAAGGTCAACTTCTCCATCGGTCCCATGATGCCTACCCTTGCAGGGACC--TACAGATGCTACGGTTCTCTTTCTCACTCCCCCTATGAGTGGTCAGCTCCCAGTGACCCTCTGGACATCATGATGACAGGTGAGA------GTGTCCAGA-CATTCTTCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 14080 408 - 21488 GAGGGGAAGCCTCCCTCATTCCAGGTGCCATGGATGGGATGATAAAG------AGAGACGCCTTCTAAACTC--------ACAACC---------TCTCTTCCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAAATGTCATGTTTGAGCACTTCCTTCTGCACAGAAAGGGG--------AAGTTTGAGGGCACTTTGAACCTCACTGGAGAGCTCCATGATGGGGTCT------CCAAGGCCAACTTCTCCATCGGTCCCATGAGGCACGACCTTGCAGGGACC--TACAGATGCTACGGTTCTGTTACTCACTCCCCCTATGAGTGGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCACAGGTGAGA------GTGTCCGGA-CATTCTTCTC i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47713672 408 + 51301725 GAAGGAAAGCCTCACTCATTCCGGATCCTGTGGATGAGATGAAAAAG------AGAGATGCCTTCTAAACTC--------ACAACC---------TCTCTTCCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCGCTGGTGAAATCAGGAGAGACAGTCATCCTGCAGTGCTGGTCAGATATCAAGTTTGAGCACTTCCTTCTGCACCGAGTGGGG--------AAGCTTGAGGAGCCCTTGCGTCTCATCGGAGAGCTCCATGACGGGGGTT------CCAAGGCCAATGTCTCCATCAGTCCAGTGACACCTGCCCTGGCAGGGACC--TACCAATGCTACGGTTCTTTTACTCACTCCCCCTATGAATGGTCAGCTCCCAGTGACCCCTTGGACATCGTGATCACAGGTGAGA------GTGTCAGGA-CATTCTTCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47451103 408 + 50890351 GAGGGGAACCCTCACTCGTTCCAGGTGCCATGGATATGATGACAAAG------GGAGACGCCTTCTAAACTC--------ACAACC---------TCTCTTTCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGGAGAGACAGTCATCCTACAATGTTCGTCAGATACCGTGTTTGGGCACTTCTTTCTGCAAAGTGAGGTG--------ACCTTTGAGGAGCCCTTGCACCTTGTTGGAGAGCTCCGTGGTGGGGGTT------CCCAGGCCAACTATTCCATCCGTCCCACGATGTCTGCCCTTCCAGGGACC--TACAGATGCTACGGTTCTGTCACTCACTCCCCCTATGTGTTGTCAGCTCCCAGTGACCCCCTGGACATCATGATCACAGGTGAGA------GTGTCCGGA-CATTCTTCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771332 411 + 49145316 GAGGGAGAGCTTCACCC---TGAGGTCCCAGGTGAGGGGTGAGGAAG-------GAGACCCCTGTGAATTCC--------TCTGTC---------TTTGCTCCCAGGTGCATTCACAAAACCTTCCATCTCAGCCCACCCAAGCTCCCTGGTGGCTGCGGGAGTTAGGGTGACCGTGAGCTGTCACTCGGAGCTGGCATTTGATGAGTTTATCTTATACAAAGATGGGCACACACAGCATTCCCAGGAACTTGACACGAGGTTGGAG--------GCTGGGACTTACTACGTCAAGGCTGTCTTTTGCCTGGGTCCTGTCACGCCGGCCCAGGCAGGAGCC--TACAGATGCTGTGGTTCTTTCAGTCACTCCCGCTATGAGTGCTCGGCTCCCAGCGACCCCCTGGAGATTGTGATCACAGGTGAGT------GTGGCTGGACCATCCTGCTC i calJac3.chr22 T 51452 I 617 s canFam3.chr1 19893319 416 - 122678785 GACAGTGAGAC---------CCAGGAGTCA-GGATGGGAGAAGGGAGGATTGGGGAGAATCAGCCTACAATCCATGGCCTACAATCCATGGCTGGTCTTCTCCCAGGTGTGTTGGGGAAGCCCTCCCTCTTGACCCAGCAGGGCCCTGTTGTGACCTCTGGACAGAACCTGACCCTCCAGTGTCTCTCTGATGTCAGCTACGACAGATTCGCTCTGTTCAAGGAAGGG--------ACAAGTGACCTCCTTCAGCTTCATGGCCGGCAGACTCAGGCTGGGTTCT------CTGGGGCAGACTTCTCCCTGAGCCCAGTGAAATCCTCCC--GCGGGGGCCAGTACACATGCTACGGTGGACACAACCTCTCCTCCCA---GTGGTCAGCCCCCAGTGACCCCCTAGACATCCTGGTCACAGGTGAGGAGCCATGGGTACAGT-CA-------- i canFam3.chr1 C 0 C 0 e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=12318.000000 s hg38.chr19_GL949747v2_alt 466719 11 + 729520 ATTGTCATTGG s panTro4.chr19 59706930 11 + 63644993 ATTGTCATTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634538 11 + 60714840 ATTGTCATTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 14488 11 - 21488 ATTGTCATTGG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47714080 11 + 51301725 AATGTCACTGG i papAnu2.chr19 C 0 M 1510 s chlSab2.chr6 47451511 11 + 50890351 ATTGTCACTGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19893735 1 - 122678785 ----------G i canFam3.chr1 C 0 C 0 e calJac3.chr22 45771743 617 + 49145316 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=148197.000000 s hg38.chr19_GL949747v2_alt 466730 162 + 729520 GATGCAGAGTGAATGATCCAGGACTTGGAGG-----CCCAG---GTGGTTGTAAGGAAGATGAGCTTGGTATTCTTATGGAGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGT---ACAGACCAGGTGTCATAACAGAGGACACACA s panTro4.chr19 59706941 162 + 63644993 GACACGGAGTGAATGATCCAGGACTTGGAGG-----CCCAG---GTGGTTGTAAGGAAGATGAGCTTGGTATTCTTATGGAGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGT---ACAGACCAGGTGTCATAACAGAGGACAGACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634549 162 + 60714840 GATGCAGAGTGAATGATCCAGAACTTGGAGG-----CCCAG---GTGGTTGTAAGGAAGATGAGCTTGGTATTCTTATGGGGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGATAGAGAAACAGGAGACACAAGT---ACAGACCAGGTGTCATAACAGAGGACAGACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 14499 162 - 21488 GACACAGAGTGAATGATCCAGGACTTGGAGG-----CCCAG---GTGGTTGTAAGGAAGATGAGCGTGGGGTTCTTATGAAGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGACAGAAAAACAGGAGACACAAGT---ACAGACCAGGTGTCATAACAGAGGACAGACA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47451522 163 + 50890351 GACACAGAGTGAATGATCCAGAACTTGGAAG----CCCCAG---GTGGTCATGAGGAAGATGAGTGTGGGATTCTTATGGAGACAGACTGACTTGGCGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGT---ACAGACCAGGTGTCATAACAGAGGACAGACA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19893736 131 - 122678785 GACCCAGACTGCA-----CAGGTCCCTGAGGGGAACCCCAGGTAGTGGCCGCCAGGACCAAGGGTGTGGGGTCCACAGGGAGGGAG--------------------------AGAGACAGAGAAACCGGGGATAAAGATGGGAGAGACT-----------CAGAGGACACAGA i canFam3.chr1 C 0 C 0 e calJac3.chr22 45771743 617 + 49145316 I e papAnu2.chr19 47714091 1510 + 51301725 M e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=182860.000000 s hg38.chr19_GL949747v2_alt 466892 228 + 729520 CAGGGGCCTTTCCGAGAGTTAGAAAAGACAGAAGGAGTTAAAGGAGACA----GACAGACAGACATGTCCCAGAGAGAGGTGTCCCTCCATGCTGACTTTGCTCAGAGACCTGGCACATGTTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTATGGCCTCAGGCCTTCTGGCAC s panTro4.chr19 59707103 226 + 63644993 CAGGGGCCATACCGAGAGTTAGAAAAGACAGAAAGAGTTAAAGGAGACA------CAGACAGACATGTCCCAGAGAGAGGTGTCCCTCCATGCTGACTTTGCTCACAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGAAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCGTGTGGCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634711 228 + 60714840 CAGGGGCCATACCGAGAGCTAGAAAAGACACAAGGAGTTAAAGGAGACA----GATAGACAGACATGTCCCAGAGAGAGGTGACCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGATTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGGCAC i ponAbe2.chr19 C 0 T 21269 s nomLeu3.chr10_GL398297_2_random 14661 227 - 21488 CAGGGGCCATACCGGGAGTTAGAAAAGACAGAAAGAGTTAAAGGAGACA----GACAGACAGCCATGTCCCAGAGAGAGGTGTCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAAGTTAGCAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAGGACACTCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCA-GCCTTGTGGAAC i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47451685 231 + 50890351 CAGGGGCCAGACAGGGAGGTAGAAAAGAGAGAAAGAGTTAAAGGGGACACTCAGACAGACAGACATATCCCAGAGAGAGGCGTCCTTCCATGCTGACCTTGCTCAGAGACTTGGCACAGGTTAGAAATTTCATTTCTGTTTTACCTCCACAAAGTGTT-TCTACCAAGAGAACCCAAGGACGCACATATTTCTGTCCTGAGTCAGCCCCTGTGGCCTCAGGCCTTGTGGTAC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19893867 0 - 122678785 C e calJac3.chr22 45771743 617 + 49145316 I e papAnu2.chr19 47714091 1510 + 51301725 M e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=516314.000000 s hg38.chr19_GL949747v2_alt 467120 699 + 729520 CTACAGATGCCATGTTTATTCTGACACCTCTGCC-TTCCAGGTAATGGAGAGTAATCGTCCCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGTAGTCTCCAGACTGGATTCTGAGGCTCACATTCCAAATAACCCCACATATGAAAGGATCACTGAGAGGCACAGAGAAAAATCAGGAACACCAAAAAGCAAAGACATAAACACACAGAGAATGAGCCAGAGGAAGGAGATTGAGAGACTCACAGACACATAAAGAGAGAGAAAAGAGGGCAGAGGAGTGGTGAGAATGATGGAAGGGAGCAGAGA-AAAGcactaaaattagagtcatgagggagaggcacaaggacatagaaagatggagatgtggggatgaattgcagagattccaaagagaactagagagaccgagaggcagagcaagacag------------------atgatag----atggatagatatagatagatgataaataggtagatgatagata----ataggttatagatacatagatgatgattgattgattc----attaatagatgagacatagagatgatgatgatgaagacagatagataatacatagagatagagaggcagac--atagagaaatcat----agagagagagagatgatacacagatatagataatagatgattgatggatagat--------agaaaattgat----agataaatagatgatatatag s panTro4.chr19 59707329 697 + 63644993 CTAAAGATGCCGTGTTTATTCTGACACCTCTGCC-TTCCATGCAATGGAGAGTAATCGTCGCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACATGCGGTCCCCAGACTGGATTCTGAGGCTCACATTCCAAATAACCCCACATATGATAGGATCACTGAGAGACACAGAGAAaagtcaggaacaccaaaaagcaaagacataaacacacagagaatgagccacaggaaggagactgagagactcacagacacataaag-gagagaaaagagggcagagaagtggagagaatgatggaagggagcagagacaaagcactaaaattagagtcctgagggagaggcacaaggacatagaaagatggagatgtggggatgaattgcagagattccaaagagaactagagagaccgagaggcagagcaagacag------------------atgatag----atggatagatatagatagatgataaataggtagatgatggata----attggttatagatacatagatgatgattgatttattc----attaatagatgatacatagacatgatgatgatga----agatagataatacaaagagatagagaggcagacaaagagagaaatcatagagagagagagagagatgacacatagatatagataatagattatt----gatagat--------agacaattgac----agacaaatggatgatagaTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56613670 701 + 60714840 CTACAGATGCCGTG-TTATTTTGACACCTTTTCCTTTCCATGCAATGGAGAGTAATCATCCCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGGGGTCCCCAGACTAGATTCTGAGGCTCACATTCCAAATAACCCCACATATGAGAGGATCACTGAGAGACACAGAGAGAAATCAGGGACACCAAAAAGCAAAGACATAAACACACAGAGAATGAGCCAGAGGAAGGAGATTGAGAAACTCACAGACACATAAAGAGAGAGAAAAGAGGGCAGAGAAGTGGAGAGAATGATGGAAGGGAGCAGAAA-AAAGCACAAAAATTAGAGTCCTGAGGGAGAGGCACAAGGACATAGAAAGATGGAGATGTGGGGATGAATTGCAGAGATTCcaaagagaactagagagaccgagaggcagagcaagacag------------------atgacag----atggatagatatagatagatgataaataggtagatgatagata----ataggttatagatacaaagaagatgattgattgattcattgattaatagatgatacatagagatgatgatgatga----agatagataatacatagagttagagaggcagacaaagagagaaatcat----agagagagagagatgatacatagatatagataatagatgattgatggctagat--------agacaattgat----agataaatagatgatatatag i ponAbe2.chr19 T 21269 C 0 s nomLeu3.chr10_GL398297_2_random 14888 700 - 21488 TTACAGATACCGTGTTTATTCTGACACCTCTGCC-TTCCATGCAATGGAGAGTAATCTTCCCAGGATATCGTGGCCCCAGAACACCAACCCCTGTATGCCGTGTCAACTTGCGGTCCCCACACTGGATTCTGAGGCTCATATTCAAAATAATCCCACATATGAGAGGATCACTGAGAGACACAGAGAGAAATCAGGGACACCAAAAAGCAAAGACATAAACAGACAGAGAATGAGCCAGAGGAAGGAGATTGAGAGACTCACAGACACACAAAGAGAGAGAAAAGAGGGCAGAGAAGTGGAGAGAATGATGGAAGGGAGCAGAGA-AAAGCCCTAAAATTAGAGCCCTGAGGGAGAGGCACAAGGACATAGAAAGATGGAGATGTGGGGACGAATTGCAGCGATTCCAAAGAGAACtagagagaccgagagacagagcaagacag------------------atgatag----atggatagatatagatagatgataggcaggtagatgatagata----ataggttgtagatacatagatgatgattgatggattc----attaacggatgatacatagagaggatgatgatgaagatagatagataatacatagagatagagaggcagacaaagagag-aatcat----agagagagggagatgatacatagatatagataatagatgattgatggatggat--------agacaattgat----agataaatagatgatatatag i nomLeu3.chr10_GL398297_2_random C 0 N 0 s chlSab2.chr6 47451916 701 + 50890351 CTACAGATGCCGTGTTTGTTCTGACACCTCTGCC-TTCCGTGCAGTGGAGAGTCATCGTCCCAGGATATCGTGGCTCCAGAACACCAACCCCTGTATGCTGCGTGTACTTGGGGTCCCCAGATTGGATTCTGAGGTTCATATTCCACATAACCCCACATATGATAGGATTCCTGAGAGACACAGAGAGAAATCAGGAACATCAAAAAGCAAAGACATAAACACAAAGAGAATGAGCCAGAGGAAGGGGACTGAGAGACTCACAGACACATAAAGAGAGAGGAAAGTGGGCAGAGGAGTGGAGAGAATGATGGAAGGGAGCAGAGA-AAAGCTCCAAAATCAGAACCCTGAGGGAGGGGCACAAAGACAGAGATAGATAAAGATGTGGGGATGGATTGCAGAGATTCCAAATAGAACTAGAAAAACTGAGAGGCAGAGAAAGACAAGGAAatggagagagacatatgatagatgaatggatagatgtagatagatgataaataggtaggtgatagataatggatgggttatagatacatagatgatgattgatagatat--------atagat----------------------------acgtagatgatacatagagacagagaggcagacagatagaga----------gggaacagacagatgatacacagatatagataatagatagatggtggatagatagagagacagaaaattgatacagagatagatacatgcaacatag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19893867 0 - 122678785 C e calJac3.chr22 45771743 617 + 49145316 I e papAnu2.chr19 47714091 1510 + 51301725 M e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=146630.000000 s hg38.chr19_GL949747v2_alt 467819 339 + 729520 atatagatgacaggtagagaatttgtagataggcacggaatagataaatagatagatcgatagATAATAGATAGAAATATGCAGAAAGTTATGAACAGGACACAAAGTGAGAAACTCAGAATTAA--AAAAAGTAACATCAAGTGAACCAATCCAAGGAGAGTCAGAGAGAATAAAACAATCCAAAAAGAGAAAACA----TATCTAGAGGTGGGGAAGTGAGGTCagagacctagagagacagagaaggtggaaggaggaaatagacgtgaagagagatggggtggagggtgagagagagagagagagagCATTAGGTCACAGAGCAGGGGAGTGAGTTCTCAG s panTro4.chr19 59708026 336 + 63644993 ATATAGATGGCAGGTAGAGAATTTGTAGTTAGATACTGAatagataaatagatagatcaatagataatagatagaAATATGCAGAAAGTTATGAACAGGACACAAAGTGAGAAACTCAGATTTAA--AAAAAGTAACATCAAGTCAACCAATCCAAGGAGAGTCAGAGAGAATAAAGCAATCCAAAAAGGGAAAACA----TATCTAGAGGTGGGGAAGTGAGGTCAGACACCTagagagacagagaaggtggaaggaggaaatagacatgaagagagat-gggtgaagggt--gagagagagcgagagagCACTAGGCCATAGAGCAGGGGAGTGAGTTCTCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56614371 333 + 60714840 atatagatgacaggtagagaatttgtagagaggcaccgaatagataaatagatagatcgatagagaatagaTAGAAATATGCAGAAAGTTATGAACAGAACACAAAGTGAGAAACTCAGAATTTA--AAAAAGTAACATTAAGTCAACCAACCCAAGGAGGGTC--AGAGAATAAAACAATCCAAAAAGGGAAAACATATCTATCTAGAGTTGGGGAAGTGAGGTCAGAGACCTAGAGAGACAGAGAAGGTGGAAGGAGGAAGTAGACATGAAGAGAGATGGGGTGGAGGGT--------GAGAGAGAGAGCATTAGGTCATAGAGCAGGGGAGTGAGTTCTCAG i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47452617 330 + 50890351 ataCAGATTACagatagataattgatagattgataggtagtagatagatagatcgatcgatagataatagatagaAATGTGCAGAAGGTTATGAAGAAGACAGAAAGTTAGAAACTCAGAATTAAAGAAAAAGGAAGATCAAGTCAA-CAATCCAAGGAGGATCAGAGAGAAGAAAACAATACAAAAAGCGAAAACA----CACCTCGGGCTGGGGAAGTGAGGTCAGAGACCTagagagacagagaaagtggaaggaggaaacagacatgaagagagaTGGGGTGGAGGGT----------GACAGAGAGCATTAGGTCATAGAGCAGGGGAGTGAGTTCTCAG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19893867 0 - 122678785 C e calJac3.chr22 45771743 617 + 49145316 I e papAnu2.chr19 47714091 1510 + 51301725 M e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=17959.000000 s hg38.chr19_GL949747v2_alt 468158 42 + 729520 CTCAGGT--GAAGGGAGCTGTGACAAGGAAGATCC-TCCCTGAGG s panTro4.chr19 59708362 44 + 63644993 CTCAGGTGGGAGGGGAGATGTGACAAGGAAGAACC-TCCCTGAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56614704 42 + 60714840 CTCAGGT--GAAGGGAGCTGTGACAAGGAAGAACC-TCCCTGAGG i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47452947 43 + 50890351 CTCAGGTGTGAAGGGA-CTGTGACAAGGAAGAACC-TCCCTGAAG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19893867 32 - 122678785 CTCAGGT--CAA---------GACAAGGCTGGACCAACCCTTA-- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45771743 617 + 49145316 I e papAnu2.chr19 47714091 1510 + 51301725 M e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=74500.000000 s hg38.chr19_GL949747v2_alt 468200 93 + 729520 AAAATGCCTCTTCTCCTTCCAGGT---CTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCTGGCAGGAGAGAGCGTGACCTTG s panTro4.chr19 59708406 93 + 63644993 AAACTGCCTCTTCTCCTTCCAGGT---CTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTTGGGCAGGAGAGAGCGTGACCTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56614746 93 + 60714840 AAACTGCCTCTTCTCCTTCCAGGT---CTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCAGGCAGGAGAGAAGGTGACCTTG i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47452990 93 + 50890351 AAACTGCCTCTTCTCCTTCCAGGT---CTATATGACAAACCTTCTCTCTCAGCCCAGCCAGGCCCCACAGTTCAGGCAGGAGAGAACGTGACCTTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772360 93 + 49145316 AATCAGCCTCTTTTCCTCCCAGGA---AAACACAAAAAGCCTTCTCTCTCCACCCAGGAGGACCCCAGGATGGGGAGTGGAGAGAACGTGACGTTA i calJac3.chr22 I 617 C 0 s canFam3.chr1 19893899 94 - 122678785 --CCTACCCTTCCTCTCTCTAGGACAGCTCTCCTATACACCCTCCTTACGGGTGCATCCAGGACCCACGGTGGCCCCAGGAGAGAATGTGACCCTG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47714091 1510 + 51301725 M e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=277231.000000 s hg38.chr19_GL949747v2_alt 468293 270 + 729520 TCCTGCAGC--TCCCGGAGCTCCTATGACATGTACCATCTATCCAGGGAAGGGGAGGCCCATGAACGTAGGCTCCCTGC-----AGGGCCCAAGGTCAA--CAGAACATTCCAGGCCGACTTTCCTCTGGACCCTGCCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGACTCTCCATACGAGTGGTCAAAGTCAAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAAAGCCCATGGCTGTC----CCATGTCCTA----T---------GATCCTAGAGCCTT s panTro4.chr19 59708499 270 + 63644993 TCCTGCAGC--TCCCAGAGCTCCTATGACATGTACCATCTATCCAGGGAGGAGGGGGGCCGTGAACGTAGGCTCCCTGC-----AGGGCCCAAGGTCAA--CGGAACATTCCAGGCCGACTTTTCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGACTCTCCCTATGAGTGGTCAGATCCGAGTGACCCACTGCTTGTTTCCGTCACAGGTGAGGAAAGCCCATGCCTGTC----CCATGTCCTA----T---------GATCCTAGAGCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56614839 270 + 60714840 TCCTGCAGC--TCCCGGAGGTCCTATGACATCTACCATTTATCCAGAGAGCAGGGGGGCCGTGAATGTAGGCTCCCTGC-----AGTGTCCAAGGTCAA--CGGAACATTCCAGGCAGACTTTCCTCTGGGCCCTGTCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCTGTGACTCTCCCTACGAGTGGTCAAACTCGAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGAAAACCCCATATCTGTC----TCATGTCCTA----T---------GATCCTAAAGCCTT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47715601 263 + 51301725 TCCTGCAGC--TCCCAGAGCTCATTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCCATGAACTTAGGCTCCCTGC-----AGTGCCCAGTGTCCA--TGGAATGTTCCAGGCCGACTTCCCTCTGGG-------A------CCCATGGAGGGACCTACAGATGCTTTGACTCTTTCCGTGCCCCATCCTTCGAGTGGTCAGACCTGAGTGACCCACTGCCCGTTTCTGTCACAGCTGAGGAAAGCCTATGCCTGTC----CCATGTCTTA----T---------GACCCTAGAGCCAT i papAnu2.chr19 M 1510 C 0 s chlSab2.chr6 47453083 270 + 50890351 TCCTGCAGC--TCCCAGACCTTGTTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCCGTGACCTTAGGCTCCCTGC-----AGTGCCAAACATCAA--TGGAACATTCCAGGCCGACTTCTCTCTGGGCCCTGCCA------CCAACGGAGGAACCTACAGATGCTTTGGTTCTTTCCATATCGCACCCTACGAGTGGTCAGACCCGAGTGACCCACTGCCCGTTTCTGTCACAGGTGAGGAAACGCCATGCCTGTC----CCATGTCTTA----T---------GATCCCAGAGCCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772453 283 + 49145316 TTCTGCATC--TCTGAAATCTCATTTGACCGGTACCATCTGTGGAGAGAGGGGGCTCCTTATGGCCAGTGGCTCAGTGG-----AGGTCAGGGACACAG--GGGAGCATTCCAGGCCAACTTTTCTGTGGGCCTCGCAACGCCAGCCCATGGAGGGACCTATAGATGCTACGGTTCTTTCAATGCCTCCCCCTATGAGTGGTCGGCCCCCAGTGAGCCCCTGCACCTTTCTGTCACAGGTGAGG--AGCCCACACCTGCC----ACCTGTCCTG----TTGTCCACTAAGTCCCAGAGCCAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19893993 284 - 122678785 --CTGTGTCAGTCACTGAGCAATGTGGACACATTCCTTCTGTCCAAGGATGGGGCAGCTGATGC-------CTCCTTGCGTCTTAGATCGAAGTACCGAGCTGGGAAGTACGAGGCTGAATTCTCCATGAGTCCTGTGACCCCAGCCCATGGGGGGACCTACAGGTGCTACGGCTCTATCAAAACCTCTCCCTACCTGTTGTCATACCCCAGTGTCCCCGTGGAGATCCTGGTCTCAGGTGAGTAGCCCTTGCCCCTGTCCCCTCCATGTGCTAACATT---------GTTCTCAGGGCCCT i canFam3.chr1 C 0 N 0 e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=167565.000000 s hg38.chr19_GL949747v2_alt 468563 214 + 729520 AGC---TGAGGAGCTTCCTGCTGA------------------------GGATGGAGAGAAGCATGGACAGATGCAGAGA-GAAGACGCAGCCTCGGTGTGAGGGAGGGATCAGGGCACAGGATGGCAGACAGGGCACCTCCAAACCCTCCTACATGGCCTGCATGGAGGCCC-GCGGCCAGGGCTCCAGGCACCCAGGCAGA-TGGAGAAAGCGGTCAGGAGAGACCCAGA-GGAGGG-AGACTGG s panTro4.chr19 59708769 215 + 63644993 AGC---TGAGGAGCTTCCTGCTGA------------------------TGATGGAGAGAAGCATGGACAGATGCAGAGA-GAAGATGCAGCCTCGGTGTGAGGGAGGGATCAGGGCGCAGGATGGCAGACAGGGCACCTCCAAACCCTCCTACACGGCCTGCATGGAGGCCC-GCGGCCAGGGCTCCAGGCACCCAGGCAGA-TGGAGAAAGCAGTCAGGAGAGACCCAGA-GAAGGGGAGACTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56615109 215 + 60714840 AGC---TGAGGAGCTTCCTGCTGA------------------------TGATGGAGAGGAGCATGGACAGATGCAGAGA-GAACACGCAGCTTGGGTGTGAGGGCGGGGTTAGGGCGCAGGATGGCAGACACGGCACCTCCAAACCCTCCTGCATGGCCTGCATGGAGGCCT-CCGATCAGGGCTCCAGGCACCCAGGCAGA-TGGAGAAAGCGGTCAGGAGATACCCAGA-GACGGGGAGACTGG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47715864 215 + 51301725 AGC---TGGGGAGCTTCCTGCTGG------------------------TGATGGAGAGAAGCATGGACAGATGCAGAGA-GAAGACGAAGCCTGGGTGTGAGGGGGGAATGAGGGCACAGCATGGCAGAGAGGGCACCTCCAAACCCTCCTGCATGGCCTGCGTGGTGGTCC-GCGGTCAGGGCTCCAGGCACCCaggcaga-tggagaaactggTCAGGACAGACCCAGA-GGAGGGGAGACTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47453353 213 + 50890351 AG----TGAGGAACTTGCTGCTGA------------------------TGATGGAGAGAAGCATGGACAGGTTCAGAGA-GAAGACCAAGCCTCAGTGTGAGGGCAGGATCAGGACGCAGGATGGCAGAGAGGGCACCTCCAAACCCTCCTGCATGGCCTGTGTGGTGGTCC-GCGGTCAGGGCTCCAGGCCCCCAGGCAGA-TGGAGAAACTGGTCAGGACAGACCCAGA-GGA-GGGAGACTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772736 201 + 49145316 ACC---AGAGGGGCATCCCACTGGGCACACAGGGGCATTAGGTATTCTGGACAAAATGAAGCAGTGAAAAATACAGACAGGGATGAACAGGCTGAGTGGGATGGGGCTGTCAGGGTGCAGGGC-ATAGACAGGGCAGCTCTGCGCCCTCC------------------GCCC-----------CTCC-----------TACA-TGAAGAAAGAGGTCAGGGCAAACACAGGTGGAGGTGAGGCCAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19679133 199 - 122678785 -GCCCATAGGGCAGTGCTAGCCTG------------------------GGATGGGAGTGAGGGGTCACAGAATTAG-GA-GATCATCCAG-----------AGGGGACCTCAGCTCTCAGGGGGATAGTCAGGACAACACCATCCCTGACTTCTCCCCTTCCCTTGAGGCCCTGTAGTGA-----CAGGGGAGTGATGTAGACTGGAGAGGAC--TCAGGGCTGACAGAAG-GGAAGA-AGGCCAG i canFam3.chr1 N 0 N 0 e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=104754.000000 s hg38.chr19_GL949747v2_alt 468777 93 + 729520 GCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACATTACCCA-TTTCCCAGAAGCCCATCCTGGCCTCTCACCCACACAGAGATGTC s panTro4.chr19 59708984 93 + 63644993 GCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACATTACCCA-TTTCCCAGAAGCCCATCCTGGCCTCTCACCTACACAGAGATGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56615324 93 + 60714840 GCTCAGTTTGGGAGGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAGCCCATCCTGGACTCTCACCCACACAGAGATGTC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47716079 93 + 51301725 GCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGaagcccaccctggcctctcacCCACAGAGAGATGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47453566 93 + 50890351 GCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCTGAAGCCCATCCTGGCCTCTCACCCACACAGACATATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772937 93 + 49145316 ATGGAGTTTGTTGAGATCAGAGGTTGCCTCAGCCCCTCGCCCTTTTCCATTTTCTCCGAAGCCCCTCCTGACCCCTCACC-ACAGAGAGATTTC i calJac3.chr22 C 0 T 1697 e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=49116.000000 s hg38.chr19_GL949747v2_alt 468870 69 + 729520 ATCACCAGCAATCCCT-ACACCCTTTACTTTTC-TTTGAAGAAATATTTATTGAGGATAAATATACCTATA s panTro4.chr19 59709077 70 + 63644993 ATCACCAGCAACCCCT-ACACCCTTTTCTTTTTGTTTGAAAAAATATTTATTGAGGTTAAATATACCTATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56615417 70 + 60714840 ATCACCAGCAACCCCT-ACACCCTTTTCTTTTTGCTTGAAAAAATAtttattgaggtgaaatatacctata i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47716172 71 + 51301725 ATCACTAGCAACCCCTAGGACCGTTTCCTCtttgtttgaaaaattatttattgaggtTTAATACACCTATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47453659 70 + 50890351 ATCACCAGCAACCCTT-GCACCTTTTTCTTTTCATTTGAAAAAATATTTGttgaggttaaatatacctata i chlSab2.chr6 C 0 T 58301 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=579586.000000 s hg38.chr19_GL949747v2_alt 468939 756 + 729520 TAGCTTACCACCTTTAACA--ttttttttt------gaggtggagtcta--gctctgtcccctatgctggagtgcagtggcacaatctcagctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagccacctgagtagctggtgctacaggcacgcaccaccatgccaggctactttttgtatttttagtagagaggtggtttcaccatgttggtcgagctggtctcgaactcctgaccacatgatccacccgcatcagcctcccaaagtgctgggattacaggcatgggccaccgcacccagccACATTTACCATTTTTAAGTGTAAAGTCTAGTGGTCataaatacatttatatatatatatatataca----------------------------------------------------t--------------------TTTTTTTAccctccacccttttcttcctgtcctccagtagccaccattctactctctaccttcatgagatccaccttttagctcctgtatatgggtgagaaatgggaatctttgtaatgacctccagttccatccatgtggctgcaaatgacaggatgttattctttctatggatgagtagtctccactgtgcgtatgtactacattctctctatccattcacccactgatgggca-ggtaggttgactcctcatcttggctactgtgaacagtgctgcaccaatcatacgagtgcagatatcacttcgatatattgatttactttcctttggatataaacccagtagtgaaattgctggatactatgaaagttctcttttt s panTro4.chr19 59709147 761 + 63644993 TAGCTTACCACCTTTAACA--tttttttttttttttgaggcagagtcta--gctctttcccctatgctggagtgcagtggcacaatctcagctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagccgcctgagtaactggtactacaggcatgcatcaccatgccaggctaccttttgtatttttag-agagagggggttttaccatgttggttgagatggtcgctaattcctgaccacgtgatccacgcgcctcagcctcccaaagtgctgggattacaggcatgagccaccacacccggccACGTTTACCATTTTTAAGTGTAAGGTCTAGTGGTCATAAATACATACATATATAATTGTTTCTTTG----------------------------------------------------T--------------------TTGTTTTATcctccacccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgtatatgggtgagaaatgagaatctttgtaatgacttccagttccatccatgtggctgcaaatatcaggatgttattctttctatggatgagtagtctccactgtgtgaatgtactacattctctctatccattcatccactgacgggca-ggtaggttgactccacatcttggctactgtgaacagtgctgcaccaatcagacgagtgcagatatcacttcgatatattgatttactttcctttggatataaacccagtagtgaaattgctggatactatgaaagttctcttttt i panTro4.chr19 C 0 I 16 s ponAbe2.chr19 56615487 763 + 60714840 tagcttaccatctttaaca--ttttttttttttt----ggcggagtcta--gctctgtcccctatgctggagtgcagtggcacaatctcagctcactgcaacctccgcctcctgggttcaaacgattctcctacctcagccgcctgagtagctggtactataggcacgcaccaccacgccaggctactttttgtattttgagtagagagggggtttcaccatgttggtcgagctggtctcgaactcctgaccacgtgatccacctgcctcagcctcccaaagtgctgggattacaggcatgatccaccgcgcccggccacttttaccatttttaagtgtaaattctagtggTCataaatacatttatatatatatatgtatatatatatat---------------------------------------------T--------------------TTTTTTTAccccccacccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgtatatgggggagaaataggaatctttgtaatgacttcgagttccatccatgtggctgcgaatgacaggatgttattctttctatggatgagtagtctccactgtgcgtatgtactacagt-tctctattcgttcatccactgatgggcagggtaggttgactccacatctcggctactgtgaacagtgctgcaccgatcatacgagtgcagatatcacttcgatata-tgatttcctttcc-ttggatataaacccagtagtgaaattgctggatactatgaaagtttttcgttt i ponAbe2.chr19 C 0 I 4 s papAnu2.chr19 47716243 826 + 51301725 TAGTTTaccacttttaaca---------ttttttttgaggcgaagtcta--gctctgtcccctatgctggagtacagtggcacaacctcggctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagccacccgagtagccggtactacaggtgtgcaccaccaggccaagctaatttttgtatttttagtagagacagggtttcatcatattggtcgggttggtctccaactcctgacctcgtgacctgcctgcctcggcctcccgaagtgctgggattataggtgtgagccaccactcccagccacctttaccatttttaagtgtaaagtcAAGTGgtcataaatacatttatatatttatgtgtgtgtgtgtgtatacatatatgtgtatatatatgtgtgtgtatatatgtgtatatatatgtgtgtacatatatatatatttttttaaccctcctcccttttcttcctggcctctggtagccaccattctactctctaccttcatGAGAT-CACCTTTTAGCTCCCGCCTATGGGTGAGAAATGGGAATCTTTGTAATGagctccagttccatccatgtggctgcaaatgTCAGGGTGTTATTGTCTCTATGGATGAGTAGTCTCCACTGTGTGTATGTACTACATTCTCtctatccattcacccactgagGGGCA-GGTAGGTTGCCTCCAcgtcttggctactgtgaacagtgctggaCCAATCATACGAGCGCAGATATtacttcaatatactgatttcctttcctttggataaaaacccagtagtgaaattgctAGATACTATGAaagttctcttttt i papAnu2.chr19 C 0 I 17 s chlSab2.chr6 47395428 813 + 50890351 tagtttaccacttttaacatttttttttttttttttgaggcggagtctcttgctctgtcccctatgctggagtacagtggtgcaatctcggctcactgcaacctccgcctcctgggttcaagcaattatcctgcctcagccacctgagtagccggtactacaggcatgcaccaccacgccaggctaatttttgtatttttagtagagacagggtttcactatattggtcgggttggtctcgaactcctgaccacgtgatccgcctgcctcagcctcccgaagtgctgggattacaggtgtaagccaccatgccaagccacctttaccatttttaagtgtaaagtctagtggtcataaatacatttataCATTTAtgtgtgtgtgtgtgtatatatatgtgtgtatatatatgtgtg--------------------tgtgtgtatatatata-----tTTTTTAAccttcctcccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcccgcctatgggtgagaaatggaaatgtttgtaatgagctccagttccatccatgtggctgcaaatgtcaggatgttattgtctctatagatgagtagtctccactgtgtgtatgtactacattctctctatccattcacccactgaggggca-ggtaggttgtctccacatcttggctactgtgaactgtgctggaccaatcatacgagtgcagatatcacttcgatgtactgatttcctttcctttggatataaacccagtagtgaaattgctggatactatgaaagttctcttttt i chlSab2.chr6 T 58301 I 51 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=2076.000000 s hg38.chr19_GL949747v2_alt 469695 13 + 729520 tttttttttcttt s panTro4.chr19 59709924 13 + 63644993 ttttgtttttgtt i panTro4.chr19 I 16 C 0 s ponAbe2.chr19 56616254 9 + 60714840 tttttgttt---- i ponAbe2.chr19 I 4 I 26 s papAnu2.chr19 47717086 13 + 51301725 ttttgttttggtt i papAnu2.chr19 I 17 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e chlSab2.chr6 47396241 51 + 50890351 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=2646.000000 s hg38.chr19_GL949747v2_alt 469708 24 + 729520 tttgagaaagagtttccctcctta s panTro4.chr19 59709937 21 + 63644993 tttgtga--cagtttccctctgt- i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47717099 21 + 51301725 tttgaga--cagtttccctctgt- i papAnu2.chr19 C 0 C 0 e ponAbe2.chr19 56616263 26 + 60714840 I e calJac3.chr22 45773030 1697 + 49145316 T e chlSab2.chr6 47396241 51 + 50890351 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=230436.000000 s hg38.chr19_GL949747v2_alt 469732 296 + 729520 gcccaagctggagtcaaagtggtgcgaccttggctcattgcaacctccgcctcctgggttccaatgattttcctgcctcagcctccctagtagctgggattacaggtgcacgccaccatgcctggctactttttggtttttttagtatagatgcggtttccccatgttggctgggctgctctcaaactcatgacctcaactgaggtgcccgcctcagtctcccaaagtgccgggattacaggcctgatccaccacacccaacctctttttagttctttaaaggacttccatacttt s panTro4.chr19 59709958 296 + 63644993 tcccaggctggagtacaagtgatgtgatcttggctcattgcaacctccacctcctgggttcaaatgattttcctgcctcagcctccctactagctgggattacaggtgcacgccaccatgcctggctaccttttggtttttttagtatagatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgaggtgcccgccccggtctcacaaagtgctgggattacaggcatgatccacctcacccaacctctttttagttctttaaaggacttccacacttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56616289 296 + 60714840 gcccaggctggagtacaagtgatgtgatcttggctcattgcaacctccgcctcctgggttcaaacgattttcctgcctcagcctccctagtagcagggattacaggtgcacgcccccatgcctggctactttttcttttttttagtatagatggggtttccccatgttggctgagctgctctcaaactcatgacctcaactgaggtgcccgcctcggtgtcacaaagtgctgggattacaggcatgatccaccgcacccaacctctttttagttatttaaaggacttccatacttt i ponAbe2.chr19 I 26 C 0 s papAnu2.chr19 47717120 295 + 51301725 gcccaggttggagttcaagTGATGTGATCttgcctcattgcaacctccaccccctgggttcgaatgattttcctgcctcagcctccctagtagctgggattacaggtgcatgccaccatgcctggctactttttgtactttttagtacagatggggtttccccatgttggccaggctgctctcaaactcatG-CCTCAAGTGAGGTGCCCACCTCagtctcgcaaagtgctgggattacaggtgggagccactgcgcccaatctatttttagttatttaaaggAGTTCCATACTTt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47396292 288 + 50890351 gcccaggctggagttcacgtgatgcgatc--------ttgcaacctccacctcctgggttcaaacgattttcctgcctcagcctccctagtagctgagattacaggtgcatgccactatgcctggctactttttgtactttttagtacagatggggtttccccatgttggccaggctgctctcaaactcatgacctcaagcgaggtgcccgtctcgctctcccaaagtgttgggattacaggcatgagccaccatgcccagcctctttttagtttcttaaagaacttccatacttt i chlSab2.chr6 I 51 I 91611 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=160081.000000 s hg38.chr19_GL949747v2_alt 470028 338 + 729520 tctccgtaatcgctgtactaatttacactcctcccaacagggtaccagggttctcctttctctaccaccttgccagcatttcttttgcctgtcttgcagctaaaagccatttta--------------------------------ttttatttcattttattttgaggtggagtttcgctcttgtcacccaggct-gagtgcagtggtgcgatctcggctcaccgcaacctccacctcccaggttcaagcgattctcctgcctcagcctccc--gagta-gctggaattacaggcacacgccaccacgccctactaatt---tttgtatttttagtagagacagcgtttctctatgtgggtcatactggtctcaaa s panTro4.chr19 59710254 370 + 63644993 tctccataatggctgtactaatttacactcctaccaacaggctaccagggttctcctttctcta-caccttgccagcatttgttttgcctgtcttgcagctaaaagccattttatattattttattttattttattttatttttgttttcattttattttattttgagatggattttcactcttttcacccaggctggagtgcagtggcacgatctcggctcaccacaacctccacctcccaggttcaagcaattctcccgcctcagcctacc--aagta-gctgggattacaggcatgtgccaccatgcccggctactt---tttgtatttttagtagagacagagtttctccatgtgggtcaggctggtctcaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56616585 370 + 60714840 tctccgtaatggctgtactaatttacactcctaccaacagggtaccagggttctcctttctctacccccttgccagcattactttggcctgtcttgcagctaaaagccattttattttattttattttattttatttta-------ttttattttattttattttgagatggagtttcgctcttgtcacccaggctggagtgcagtggcacgatctcagctcaccgcaacctccacctcccaggttccagtgattctcctgcctcagcctccctgaaataggctgggattacaggcacatgcaaccacgcccggcctatttaattggtatttttggtagagacagtgtttctccatgtgggtcaggctggtctcaaa i ponAbe2.chr19 C 0 I 21266 s papAnu2.chr19 47717415 363 + 51301725 tctccataatggctgtactaatttacactcctaccaacagggTACCAGGGTTCTCCTTTCTCTACcaccttgccagcatttgttttgCCTGTCTTGCAGCtaaaagccattttattttattttattttattttatttta-------ttttattttattttattttgagatggagttgtgctcttgtcacccaggctggagtgcagtggcgcgatctcagctcaccgcaacctccacctcccgggttcaa-tgattctcctgcctcagcctccc--aaata-gctggaattacaggaatgtgccaccacgcccagcttatt---tttgcatttttagtagaaacagtgtttctcCACGTGggtcaggcgggtctcaaa i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e chlSab2.chr6 47396580 91611 + 50890351 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=86428.000000 s hg38.chr19_GL949747v2_alt 470366 179 + 729520 ctcccgaccttatgagattcacccacctcaggctctcaaaattctaggatgacagacgtgagccacctcgcccggcctaaaagccattttaatggagtgagatgaaaactcactttgattttaatttgcgtttctctgatgatgagtgatactgagcagtttttcgtatgtggggaaat s panTro4.chr19 59710624 179 + 63644993 ctcccgacctcaggagattcgcccacctcgggctctcaaagttctaggatgacagatgtaagccaccatgcccgacctaaaagccatgttaatggggtgagatgaaaactcacttcaattttaatttgcatttctctgatgatgagtgataacgagcactttttcatatgcggggaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638221 179 + 60714840 ctcccgacctcaggagattcgcccacctcaggctctcaaagttctaggatgatagaggtgagccaccacgctcggcctaaaagccattttaatggggtgagatgaaaactcacttcgattttcatttgcatttctctgatgatgagtgatactgagcacttcttcatatgcggggaaat i ponAbe2.chr19 I 21266 C 0 s papAnu2.chr19 47717778 179 + 51301725 ctcccgacctcaggtgattcacccacctcaggctctcaaagtgctaggatgatagacgtgagccaccacccccagcctaaaagccattttaatgggGTGAGATGACAACTCactttgattttaatttgcatttttctaatgataagtgatactgagcactttttcatatgcggGGAAAT i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e chlSab2.chr6 47396580 91611 + 50890351 I e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=60350.000000 s hg38.chr19_GL949747v2_alt 470545 78 + 729520 ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttgtttgagcttcttatatttctagttatta s panTro4.chr19 59710803 78 + 63644993 ttcatgtctttcgctcctttttcaattaaatcatttgttttattgagttgtttgagcttcttatatttctagtcatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638400 78 + 60714840 ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttgtttgagcttcttatatttctagttatta i ponAbe2.chr19 C 0 T 20896 s papAnu2.chr19 47717957 77 + 51301725 TTCAGGTCTTCTGCTC-CTTTTTAATTAAATCATTTGTTTTATTGAGTTGTTTAAGCTTCTTATATTTCTAGTTATTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47488191 77 + 50890351 ttcaagtcttttgctcattttttagttaaattgtttgttttattgagttatgtgagcttcttatatttctagtta-ta i chlSab2.chr6 I 91611 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=185672.000000 s hg38.chr19_GL949747v2_alt 470623 249 + 729520 atcccatctcagatgcatagtttgcacatatttgctcccaatctgtgggttgtctcttcactttgttggttta-tttttagcagtgcagaagttgcttagtttgaggtaatccca-atggtcta-tttttgcttcgattacttgtgttttcaaggtttaaaacaaaatgtctttcttcagacaaatgtcctggagcatttccccaatattttgttctacgtgtttcataggttcaggccttagactcacatc s panTro4.chr19 59710881 249 + 63644993 atcccgtctcagaagcatagtttgcacatagttgctcccagtctgtgggttgtctcttcactttgttggttta-tctttagcggcgcagaagttgctgagtttgatgtaatccca-atggtcta-tttttgcctcgattacttctgttttgaaggtttaaaacaaaatgtcttccttcagacaaatgtcatggagcatttccccaatattttcttctacgtgtttcataggttctggacttagactcacatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56617582 250 + 60714840 atcccgtctcagatgcatagtttgcacatatttactcccaatgtgtgcgttgtttcttcacgttgttggttta-tctttagtggcacagaagttgcttagtttgatgtaatccca-atggtctattttttgctttgattacttgtgttttgaaggtttaaaacaaagtgtctttcttcagacaaatgtcctggagcatttccccaatattttcttctacgtgtttcataggttcagcccttagactcacatc i ponAbe2.chr19 T 20896 C 0 s papAnu2.chr19 47718034 249 + 51301725 ATCCTgtctcagatgcatagtttgcacatatttgctcccaatctgtgggttgtctcttcactttgttggttaA-TGTTTAGTGGTGCAGAAGCTgcttagtttgatgtaatccca-atggtctattttttgctttgattacttgtgtttttaaggttttaaacAAAATGTCTTTCCTCGGACAAATGTCCTGGAGCATTTCCCCAAGACTTTCTTCTACGTGTTTCATAGGTTCA-GCCTTAAACTCgcatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47488268 252 + 50890351 atcccgtctcagatgcatagtttgcaaatattggctcccattctgtgggttgtctcttcactttgttggttgcttattttgcagtgcagaagctgcttagtttgatgtaatcccctacggtccgttttttgctttgattactcgtgtttttgaggttttaaacaaaatgtcttttctcagaccgatgtcctgaagcatttccccaatattttcttctacatgtttcataggttcagggcttagactcatgta i chlSab2.chr6 C 0 T 34366 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=273666.000000 s hg38.chr19_GL949747v2_alt 470872 354 + 729520 tttaatccattttcatttga-tttttgtgtatggtgacaggtagaggtgcagtttcattcctctgcatgtcgatgtccaggtttccctgcactgtttattgaaaagactgtcctttcctgattgtgagttcttggcacctttgtcaaagtccattggatgggctgggcttggtagctaacacctgcaatttcagcactttgggaggccgaggcgggtggattacctgaggccaggagttcaagatcagtctggacgacgtgatgaaacatcgtctccactaaaaatataaaaattagctgagcatggtggtcagcacctgtaataccactactcaggagtttgaggcaagagaat- s panTro4.chr19 59711130 354 + 63644993 tttaatccattttcatttga-tttttctgtatggtgacaggtagaggtgcagtttcattcctctgcatgtagatgtccacatttccctgcactgtttattgaaaaggctgtcctttcctaattgtgagttcttgacacctctgtcaaagtccattggatgggctgggcatggtggctaacacctgcaattccagcactttaggaggccgaggcaggtggatcacctgaggccaggagttcaagatcagcctggccaacatggtgaaacatcatctccactaagtatataaaaattagctgagcatggtggtcagcacctgtaataccactactcaggagtttgagtcaagagaat- i panTro4.chr19 C 0 I 1 s ponAbe2.chr19 56617832 354 + 60714840 tttaatccattttcatttga-tttttgtgtatggtgacaggtagaggtgcagtttcattcttctgcatgtagatgtccaggtttccctgcactgttgattgaaaagactgtcctttcctgattgtaagttcttggcacctttgtcaaagtccagtggatgggctgggcatggtggctaacacctgcaattgcagcattttgggagaccgaggcaggtggatcacttgaggccaggagttcaagatcagcctggccaacatggtgaaacgttgtctctactaaaaatacaaaagttagctgagcatggtggtcagcacctgtaataccactactcaagggtttgaggtgagagaat- i ponAbe2.chr19 C 0 I 4517 s papAnu2.chr19 47718283 355 + 51301725 tttaatccattttcatttga-tttttgtgtatggtgagaggtagaggtgcagtttcattcctctgcatgtagatatccagttttccctgcaCGGTTTACTAAAAAGTCTGTCCTTTCCTGATTGTaagttcttggcacctttgtcaaagtCCATcggatgggctgggcatggtggttcacacctgcaattccagcactttgggaggccgaggcaggtggatcacctgaggccaggagttcaagatcagcctggccaacatggtgaaacatcgtctgtactaagaatacaaaaattagctgagcatggtggtcaGCGCCTGTAATACCactactcaggagtttgaggcaaaagaatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47454154 355 + 50890351 tttaatccattttgatttcactttttgtgaatggtgagaggtagaggtgcaatttcattcc-ctgcatgtaggtaaccagttttccccacatcgtttattgaaaagtctgtcctttcctgattgtacgttcttggcacctttgtcaaaatgcattggattggctgggcatggtggctcacacctgcaatcccagcacattcagaggccaaggtgggtagatcacctgagaccaggagttcgaggcccgcctggccaacatagtaaaaccctgtctccactaaaagtacaaaaattagctgagcatggtggtcagctcctgtaatatcactactcaagagtctgaggcaagagaatt i chlSab2.chr6 T 34366 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=102186.000000 s hg38.chr19_GL949747v2_alt 471226 138 + 729520 gattgaacccaggaggctgaggttgcagtgaactgagattgcacctctgcactccagcctgagtgacagagcaagactccatctcaa---aag---aaaaaataaaaaccattggatgtaaatgcatggaatatatctgtgtta s panTro4.chr19 59711485 140 + 63644993 gattgaactcagcaggctgaggttgcagtgaaccgagattgcacctctgcactccagcctgggtgacagaacgagattccatcctaa---aag-caaaaaaaaaaaaaccattggatgtaaattcatggattatatctgtgttc i panTro4.chr19 I 1 C 0 s ponAbe2.chr19 56622703 139 + 60714840 gattgaacccaggaggctgaggttgcagtgaaccgagattgcacctctgcactccagcctgggtgacagagtgagactccatctgaa---aag--aaaaaataaaaaaCCAttggatgttaatgcatggattatatctgttttc i ponAbe2.chr19 I 4517 C 0 s papAnu2.chr19 47718638 141 + 51301725 gattgaacctaggaggctgaggttgcagtgaaccgagattgcacctctgcactccagcctgggtgacagagcgagattccatctcaa---aagaggaaaaaaaaaaaaccattggaTGTAAATGCATGGATTATATCTGTGTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47454509 144 + 50890351 gcttgaattcaggaggcggaggttgcagtgagtcaagaatgcacctctgcactccagtctgggtgacagagcaagattccatctcaaaacaaaacaaaaaaaaaaaagccgttgaatgtagacgaatagattatatctgtgttc i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55629163 0 + 59248254 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=506519.000000 s hg38.chr19_GL949747v2_alt 471364 451 + 729520 ttcattctgctccattgttctatgtgcctttctttatgccaatgtcatgctgttttgcttactacagctctgtaacatattttgagatcaggtagtgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGGGTGTCACATAAAAAAATTATGGAAAAAAGGATCCCAGGACTCCCAGGGCCCAATATTAGATAACAGAGTG-TTGGCCATGAACCATCCTCAAAGATTTCCACTGAGTGGAGGACAGACACCCTCATTTCCTCACCTCTCTCCTGTCTCGTGTTCTAGGAAACTCTTCAAATAGTTGGCCTTCACCCACTGAACCAAGCTCCGAAACCGGTGAGTACAGAA-CCCTCTTATATCCGCTTTTGGAAACCTGGGGAGGTGGAAACCTTGGATTCAGGCGTTGACTCAGCATCTCACAGCTCTGACATTGTACC s panTro4.chr19 59711625 451 + 63644993 ttcattctgctccattgttctatgtgcctttcttcatgccaacatcatgctgttttgcttactatgactctgtaatatattttgagatcaggtagtgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGAGCATCACATACAAAAATTATGGAAAAAAGAATCCCAAGACTCCCAGGGCCCAACATTAGATAACAGAGTG-TTGGCCATGAACCAACCTCAAAGATTTCCTTTGAGTAGAGGACAGGCAGCCTCATTTCCTGACCTCTCTACTGTCTCGTGTTCTAGAAAACCCTTCAAATAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCGGTGAGTACAGAA-CCCTCTTATATCTGCTTTTGGAAacttggagaagtggaagccttggattcaggcattgactcagcatctcgcagatctgacattgtgcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56622842 451 + 60714840 ttcattctgctccattgttctatgtgcctttctttatgccaacgtcgtgctgttttgcttactacagctctagaatgtatttttagatcaggtagtgtgatgctcctgttttctctttataccttgaagtctcaagaCAGTGGGTGTCACATATAAAAATTATGGGAAAAAGGATCCCAGGACTCCCAGAGCCCAATATCAGATAACAGAGTG-TTGGCCATGAACCTACCTCAAAGATTTCCATTGAGTAGAGGACAGACACCCTCATTTCCTCACCTCTCTCCTGTCTTGTGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACGGAACCAAGCTCCAAAATCGGTGAGTACAGAA-CCCTCTTATATCTGCCTTTGGAAACCTGGGGAGGTGGAAACCTTGGATTCAGGCATTGACTCAGCATCTCACAGCTCTGACATTGTGCA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55629163 447 + 59248254 ttcattttgctccattgttctatgggtctttctttatgccaatgtcatgctgttttgcttactacagctctgtaacgtatttttaagtcaggtagtgtgatgctcctgttttctcctCATACCTTGAAGTCTCAAGACAGTGAGCATCACATACAATGATTATGGAGAAGGGTACACCAGGACTTCCAGGGCCCAACATTAGATAACAGAATGTTTGGGCATGAACCAACCTTAAAGGTTTCCATTGAGTAGAAGACAGGCATCTTCATTTCCACACCTCTCTCCTGTCCTGTGTTCTAGGAAACTCTTCAAGTACTTGGTCTTCACCCACAGAACCAAGCTCCAACACTGGTGAGTAAAGAACCCCTCTTGTCTCTGCTTTTGGAAACCTGGAGAGGTGGAAGCCTTGGATTCAAGCGTTAGCTCAGCTCCT------TCTGGGATTATGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47718779 451 + 51301725 TTCATTCTGctccattgttctatgtgcctTTCTTTATGccaatgccatgctgttttgcttactacaGCTCTGTAACATATTTTTAGATCAGGTAGAGTGAcgctcctgttttctttttatacctTGAACTCTCAAGACAGTGGGCATCACATACAAACATTATGGAGAAAAAGATCCCAGGATTCCCAGGGCCCAATATTAAATAACAGAGTG-TTGGCCATGAACCAACCTCAAATATTTCCATTGAGTAGAGGACAGGCAGCCtcatttcctcacctctctccttTCTTGTGTTCTAGGGAACCCTTCAAATGGTTGGCCTTCACCCACTGAACCAAGTTCCAAAACTGGTGAGTACAGAA-CCCTCTTATATCTGCTTTTGGAAACCTGGGGAGATGGAAGCCTTGGATTCAGGCGTTGACTCAGCATCTCGCAGCTCTGACATTGTGCG i papAnu2.chr19 C 0 I 30846 s chlSab2.chr6 47454653 449 + 50890351 ttcatttttctccgttgttctgtgcacttttctttatgccaatgtcatgctgttttgtttactacacctctgtaacatatttttaagtcaggtaatgtgatgTTGCTGTTTTCCCTCTATATCTTAAAGTCTCGAGACAATGGGTAACACATACAAAAATTATGGAGAAGAGGATCCCAGGACTCCCAGATCCCAGTGTTGGATAACAGAGTG-TTGGCCGTGAACCAACCTCAAAGATTTCCCTTGAGTAGAGGACAGGCACCCTCATTTCCTCACCTCTGTCCTG-CCTCTATTCTAGGAAACCCTTCAAGTACTTGGCCTTCACCCTCTGAACCAAGCTGCAAAACTGGTGAGTAAAGAATCCCTCTTATCTCTGCTTTTGGAAACCTGGGGAGGTggaagccttggattcaagccttggctcagcacctcccagctctg--actgtgag i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=815016.000000 s hg38.chr19_GL949747v2_alt 471815 798 + 729520 CCTGTCTTCCA--CCATCTCCGAACTCCAGATACTCCAACAGCGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTCATCCCTCATTTTATGGAGCTGAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAG---------G-AAAAATGCAATGTTTGTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGAGACTTGAGAGAGGGAAGGGAAGGGAACATCTGATGAGGGCGAGGTGTTT-TAGAGAAGTTCCACTTGCCAAGGAATGAGCTCCTGTAGGTCATGAAGCAACCCTGGCTGACTCCGCAGAGAAAGCGCCTTGCCGTAACAGAGAACAGAGCTCATGCACGCACACTTCGACT----CACTGACTCATTCAGCCACGGCCCCATGCTCAGGCTGTGCAGTGTGGAAGCTtttcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaacggttttt---taattatcttacagtgctctagctca-aagtatgaagtg---catctcactgggctaaaatcaaggcgacagcaaggctgccttccctctgagggttccaggcaagaatctgc-ttctcacttgtcccagcttctagaggctcccacattccttcgctcctggtccccttcctccttcctcaaagcccacaaaggctggtcaca--tctcacgtggcatcactcagacccttcttcctta-ccacacctctttatctgaatgctgctctcccttcttcctcatcttttgaaaacttggggattctattgggtt s panTro4.chr19 59712076 797 + 63644993 cctgtcttcca--ccatctctgaactccagattctccaacagcaaaagggatCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTCATCTCTCATTTTATGGAGCTCAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAG---------G-AAAAATGCAGTGTTTGTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGACTTGAGAGAGGGAAGGGAAGGAAACATCTGATGAGGGCGAGGTGTTT-TAGAGAAGTTGCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCCGTAACAGAGAACAGAGCTCATGCACACACACTTCGGCT----CACTGACTCATTCAGCCACAGCCCCATGCTCAGGCTGTGCAGTGTGGAACCTtttcctattgttgccataacaaatttccacaagattcatgggtgaaaacaaaacggttttt---taattatcttacagtgctatagctca-aagtatgaagta---catctcactgggctaaaatcaaggtgacagcaaggctgccttccctctgaaggttgcaggcgagaatctgc-ttctcacttgtcccatcttataaagtttccca-gttccttggctcctgatccccttcctccttcctcaaaacccacaaagactgatcaca--tctcacatggcatcactcagacccttcttcctta-ccacacctctttctctgaatgctgctctcccttcttccccttcttttgaaaacttggagattctattgggtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56623293 799 + 60714840 CCTGTCTTCCA--CCATCTCCAAACTCCAGATACTCCAACAGCGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTAATCTCTCATTTTATGGAACTGAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAG---------ACAAAAATGCAATATTTGTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTTGAGAGAGGGAAGGGAAGGGAACATCTGATGAGGGCGAGGTGTTT-TAGAGAAGTGCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAAGCAACCCTGGCTGACTCCGAAGAGAAAGAGCCTTGCCGTAACAGAGAACAGAGCTCATGCACGCACACTTCGACT----CACTGACTCATTCAGCCACGGCCCCATGCTCAGGCTGTGCAGTGTGGAACCTtttcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaatggttttt---taattatctaaaagtgctgtagctca-aagtatgaagtg---catctcactgggctaaaatcaaggtgacagcaaggcggccttccctctgaaggttccaggcaagaatctgc-atctcacttgtcccagcttctaaaggctcccatgttccttggctcccggtccccttcctccttcctcaaaacccacaaagactggtcaca--tctcacatggcatcactcagacccttcttcctta-ccacacctctttctctgaatgctgcttacccttcttcctcatcttttgaaaacttggggattctatcgggtt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55629610 793 + 59248254 CCTGTCTTCTG--CTGTCTCTGAACTCTAGACACTCCAACAGCACAAGGGATCTGGGGCCAACACAA---TCAGTGAAGTCTCTTAATCTCTAATTTTCTGCACCTGAGACCTC---CAAGCTAGAAGGATGAGTGCAAATCTGACACCCTTCTCAGAAAAAAAAAA-AAAAATGCAGTATTTTTTCTGCCTGCATTCCTAACTGCAGGATAAATGCCTGGGGGCTTGAGAAAGGGAGGTGAAAAGAACATCTGATGAGGGTGGGATGTTTTTAGAAAAGTTCTACTTGCCAAGGAATGAGCTCCTGTCTGTCATGACGCAATCCTGGTTGACTCAGCAGAGCAAGAAACTTGTAGTAACAGAGCATTTAGTTCATTTATGCACA---TGA------CACTCACTTGTTCAGCCAATGCCCCATGCTCTGGCTGTGCAGTGTGGAAtattttcctattgttgccataacaaatttccacaagctttgtggatgaaag-----catgtttttcttaattatctcacagtgctatagctcagaagtacgaaatg---catctcactgggctgatatcaaaggcacagcaaggctgaacttctttttaaggttccaagcaagaatctgc-tccttacatttcccagttcctagaggctcccacgttctttggcccctagaccccttcctccttcctcaaagcccatgaaggctggtcacg--tctcacatggcatcattcagactcttcttcac---ccacacctctttctctgaatgctactctgcctttttcctcatc-tttaaggactttgggattctattggggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47750076 798 + 51301725 cctgtcttcct--ctgtctctgaaCCCCAGACACTCCAACAACGAAAGGGAtctgagcccagcacagagcTCAGTGAAATCTCTTAACCTCTGATTTTCTGCTGCTGAGACCT----CAGGGTAGAAGGATGAGTGCAAATCAGACGTTGTTCTCGG---------G-ATAAATGTGGTGTTTGTTCTGCCTGCATTCCTAACCAAAGGACAAATGCCTGGGGGCTTGAaagggggaaggaaagggaacATTTT-TGAGGGTGGGGTGTTTGTAGAGAAGTTCTACTTGCCAAGGAATGAGCTCCTGTCTGTCATGATCCAACCTTGGTTGACTTAGCAGAGCAAGAGCCTTGCAGTAAGAGAGAACGGAGTTCATCCACGCACA---TGACACTTCCACTTACTGGCTCAGGCACTGCTCCATGCTCAGGCTGTGCAGTGTGGACCCTTTTCCTA-TGTTGCCATAACAAATTTCCACAGGCTTCGTGGATggaagc----cacattttaaaaaaatatctcaCGGTGCTGTAGCTCAGAATTATGAAATGCGTcatctcactgggctaaaatcaaggtgacATCAAGGCTGCCTTCCCGCTGAAGGTTCCAGGCAAGAATCTTCTTCCTCACTTTTCCAAGCTCCTAGAGGCTCCCACATTCCTTGG--TCTGGTCCCCATCTTCCTTCCTCAAAGCCCACAAAGGCTGGTCACATCTCTCACATGACATGAGACAGATCATTCTTCCTCA-CCACACCTCTTTCTCTGAATGTTGTTCTgccttcttcctcatcttttaaaGCCCTTGGGATTCTATTGGAAT i papAnu2.chr19 I 30846 T 30849 s chlSab2.chr6 47455102 799 + 50890351 cctgtcttccaacatctctctgaactccagacactccaacagcaaaaggaatCTGAGCCCGGCACACAGCTCAGTGAAGTCTCTTAATCTCTAATCTTCTGCAGCTGAGACCTCCTACAAGCTGGAAGAATGATTGCAAATCTGACATCCTTCTCAG---------G-AAAAA-GCAGTGTTTGTTCTCCCTGCATTCCTTACTGGAGGATAAATTCCTGGGGGCTTGAAAGAGGGAAGGGAAGGGAACATCTAATGAGGGTGAGGTGTTT-CAGAGAATTTCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAGGCAACCCTGGCTGACTCACCAGAGTAAGAGCCTTGCAGTAACAGAGAACAGAGCTCATGCACGCACACTTTGACT----CACTGACTCATTCAGCCATGGCCCCTTGCTCAGGCTGTGCAGT-TAGAATCCttttctattgttgccataacaaatttccacaaaattggtggatgaaaacaaaacagctttt---taattaccttacagtgctgtagctca-aaggatgaaatg---catctcacagagctaaaatcaaggtgacagcaaggctgccttccctctgaaggttccaggcgagaatctgc-tttctacatgtcccagtttctagaggctcccacgttccttggctcctggtccccttcctccttccacaaaacccacaaagactggtcacg--tctcacatggcatcactcagacccttcttccttgtccacacctctttctctgaatgttcctctgctttcttcctcatttcttaagggctttgggattttattgggtt i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=955719.000000 s hg38.chr19_GL949747v2_alt 472613 894 + 729520 caccaagatgaaaatccatcataatctccaggaaatcattcaggatacccttgttttaagttcagctgattagcaaccataattccatctgcaatcttcattcctcctttccatgtaaaataagatattcacaagctatggaggctaggacagggacattttggggtgggacagcattctcctaccTTCCACAAACAGTGAACAAGATGCATTTGGCCTCTGCCCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGTATGAAATCTA--------tttgtttgtttc-------ttcgtttgtttattgagacagagtctccctccgtcttccaggctacagtgcagtgtcaccatcttggctcactgcaacctgcaccttctggatccaagtgattctcctgcgtcagcctctcgagtagctgggattacaggcaactgccaccatgcccggct-aattctttttgtatatttttt-gt--agaggatgtttcaccatcttcgccaagcttctctgaaactcccaacctcaagtgatccgaccgtctcagcatcctaaagtactgggataactggcgtgagccactgtgcccagccAGAATTTAAAATAAATAATACATAATGCTGAGTGTATGATTTTGGGTGACAGAGAAGATCTCACTAATCAG---ATATTTGTGACATTAATGAAAAACACGGATTGAACCCCTGAAAGATTGGCGGAAGGATTTTCCACACACAGCTGTCAGCCGTGAAGGCAGAAAGCTGAAAACAATCT---GATGTGGAAGGAAGAGGCTCTGC-CTCAAATGCTGGGAATGAGATGGGGAGAATGACAAGACGACTGTGGAGAGA s panTro4.chr19 59712873 904 + 63644993 caccaagatgaaaatccatcataatcttccggaaatcattcaggagacccttgttttaagttcagctgataagcaaccataattccatctgcaatcttcattcctcctttccatgtaaaataacatattcacaagctatgtaggctaggacagggacattttggggtgggacagcattctcctgccttccacaAACAGTGAACAAGATGTGTTTGGCCTCTGCTCTTGGGACACTGATATTGCGGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGCATGAAATCTAtttgtttgtttgtttgtttg-------ttcatttgtttattgagacagagtctccctctgtcttccaggctacagtgcagtgtcacgatcttggctcactgcaacctgcacctcctggatccaagtgattctcctgcctcagcctctcgagtggctgggattacaggcaactgccaccatgcccggct-aattcattttgtatatttttt-gtagagaggatgtttcaccatgttggccaagcttgtctgaaactcccaacctcaagtgatccaaccgtctcagcatcccaaagtactgggattacaggcgtaagccactgtgcccagccAGAATTTAAAATCAATAATACATAATGCTgagtgtatgattttgggtgacagagaaggtctcactaatcag---atatttgtgacattaatgaaaaacacggattgaacccctgaaatattggcggaaggattttccacacacagctgtcagccgtgaaggcacaaaggtgaaaacaatct---gatgtggaagaaagaggctctgc-gtgaaatgctgggaatgacgtggggagaatgacaagacgactgtggagaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56624092 893 + 60714840 caccaagatgaaaatccaccataatctcccggaaatcatccaggataccctggttttaacttcagctgattagcaaccataattccatctgcaatcttcattcctactttccatgtaaaataacatattcacaagctatggaggctaggacaggaacattttggggtgggacagcattctcctgccttccacaAACAGTGAACAAGATGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTGAAATGGGAGGGCAGAAAATGAACGCACAAGTGGACCAATAAATGAATGATCCATTTGGAAGCGTCTGTGCATGAAATCTA--------tttgtttgtttc-----------tttgtttattgagacagagtctccctctgtcttccaggctacagtgcagtgtcacgatctgggctcactgcaacctgcacctcctggattcaagtgattctcctgcctcagcctctcgagtagctgggattacaggcaactgccaccacgcccggct-aattcttattgtatatttttt-gtagagaggatgtttcaccatgttgcccaagcttgtctgaaactcccaacctcaagttatccaaccgtctcagcaacccaaagtactgggattacaggcgtgagccactgtgcccagccAGAATTCAAAATCAATAATAGATAATGCTGAGTGTATAATTTTGGGTGACAGAGAAGGTCTCACTAATCAG---ATATTTATGACATTAATCAAAAACACGGATTGAACCCCTGAAAGATTGGCGGAAGGATTTTCCACACACAGCTGTCAGCCGTGACGGCACAAACGTGAAAACAATCT---GATGTTGAAGGAAGAGGCTCTGCATTCAAATGCTGGGAATGAGTTGGGGAGAATGACGAGATGACTGTAGAGAGA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55630403 897 + 59248254 caccaagat---aatccatcataatctccctaaaatcgtctaggataccctccttttcagttcagctgattagcaaccgtaattccatctgtaatcttcattcctccttt-catgtaaaataatatattcacaagctatggaggctaggacagggacattttggggtggggcagcattcgcctgccttccacaAATGGTAAACAGGGTGCATTCGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAAAACGAGGGCAGAAAATGAATGCACAAGTGGATCAATAAATGAATGATCCATTGGGAAGCATCTGTGCACCAAATCTG--------tttttttggct--------tttgttttgtt-ttgaggtagagtctcactctgtcccacaggctggagtgcagtggcacaatctcaactcactgcaccctctgcctcctgggttcatgcaattcttctgcctcagcctaccgagtagctgggattacagccgcgcaccaccacactcggctaaaattttttggtatattttttagtagagatgaggtttcaccgtgttgtgcaggc-tgtctcaaactcccaatctcaagtaatctgaccgccttggcctccctaagtgcaaggattataggcgtgagccactgtgcccagccAGGATTTAAAATAAATAATAGATAATGCTgagtgtataatttcaggtgacagagaaggtctcactgatcagataatatttatgaccttaatgaaaaaaatggattcaacccttggaagattggcagaaggattttgcacactgagctctcagctgtgaaagcacaaaggtggaaacattcttaataagttcaaggaagaggctctgc-ctgaaacgctgggaatgagatggggagaattacaagaCCACTGGAGAGAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47720025 886 + 51301725 CACCAAGATGAAAATCCATCATAATGTCCCTGAAATCATCCAGGATACCCTTGTCTTAAgttcagctgattagcaaccgtAATTCTGTCTGCAATCGTCATTCCTCCTTTCCGTGTAAAATAACGTATTCACAAGCTATGGAGGCTAGGACAGGGACATTTTGGAGTGggacagcattctcctgccttccaTAAACAGGAAACAAGATGCATTTGGCCTCTACTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCA------GAATGCACAAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGCAAGAAATCTA--------TTTGCTTG-----------TTCGTTTGTTTAtcaagacggagtctccctctgtcttccaggctacagtgcagtggcacgatctctgctcactgcaacctgtgcctcctggattcaagtgattctcctgcctcagcctctcgagtagctgggattacaggcaaccactaccacgcccggct-aattctttttgtatatttttt-gtagagaggatgtttcaccatgttggccaagcttgtctgaaactcccagcctcaagtgatctgaccgtctcaggctcccaaagtactgggattgcaggtgtgagccactgtgcccagccagaatttaaaataaataatggataATGCTGAGTGTATAATTTTGGGTGACAGAGAAGGTCTCACTAATCGG---ATATTTGtgacattaatgaaaaaaatggatTGAATCCCTGAAAGACTGGCGGAAGGATTTTCCACACACAGCTGTCAGCCTTGAAGGCACAAAGGTGAAAACAATCT---TATGTGGAAGGAAGAGGCTCTGC-CTGAAACGCTGGGAATGGGATGGGGAGAATTACAAGACcactggagagaga i papAnu2.chr19 T 30849 C 0 s chlSab2.chr6 47455901 900 + 50890351 caccaagat---aatctatcatcatctccctaaaatcatccaggataccctcctttccagttcagctgattagtaaccgtaattccatctgcaatcttcgttcttcctctccacgtaaaatcacatattcacaaggtgtgaaggctaggacagggacattttgggggtggggtggattctcctgccttccacaAATAGTAAACAGGATGCATTTGGCCTGTGCTCTTGGGACACTGACGTTGCAGATGGGTAAACGGGAGGAAAGAAAATGAATGCACAAGTGGACCTATAAATGGTTGATCCACTGGGAAACATCGGTGCATGAAattga--------tttatttatgtatgtattaattATGTAtttattaagatggagtctcgctctatcccctaggctgcagtgcagtgtcacgatcttggctcactgtaacctccgcctcctgggttcaagtgattcttctgcctcagcctctcaagcagcttgga-tacaggcacccgccaccacacctggct-aattctttttgtagattgttg-ttagagaccatgtttcaccatgtggcccagtc-tatctccaactccctatctaaagtaatccgaccgcctcagcctcccaaagtgctcggattataggcgtgaaccccggcacccagccAGAATTTAAAATAAATAACAGATAATACTGAGTGTATGATTTCAGGTCACAGAGAAGTTCTCACTGATCAAATAATACTTGTGATCTTAATGAAAAAAATAGA-TCAACCCCTGGAAGACTGGCGGAAGGATTTTCCACACACAGCAGTCAGCTGTGAAGGCACAAAGGTGACAACAATCT---TATGTGGAAGGAAGAGGCTCTGC-CTGAAACACTGGGAATGAGATGGGGAGAATTACAAGACCACTGGAGAGAGA i chlSab2.chr6 C 0 I 6918 e calJac3.chr22 45773030 1697 + 49145316 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=207.000000 s hg38.chr19_GL949747v2_alt 473507 1 + 729520 C s panTro4.chr19 59713777 1 + 63644993 c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56624985 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55631300 1 + 59248254 C i macFas5.chr19 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e chlSab2.chr6 47456801 6918 + 50890351 I e papAnu2.chr19 47720911 0 + 51301725 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=1025561.000000 s hg38.chr19_GL949747v2_alt 473508 961 + 729520 GGAGAGCACACTGGGTACACAGGAAACTAAGGAGCAACAAGGAGTGTGTGTTTGACACTCACAGCCATTGGATTCACCTCGGGG-TAGCCAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCGTAACTGGAATCTAGGAGACCGTGGAAAAGGCAATTCCCGCCTCACTGGTGAAATGTGGTGCTGATTTAGACCCTAACTGGGTGAAGCAGATGGATATAAGATATGCTTGTGAGGTGGAATCATTGGCTGGAAAGGCTTGCTGGGTATGA-TTTTCCTAGTTGTCTAATCCTCGCTTAATT----TCTTTCTGAGCTTTA--TTCCTACTACACATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGGGACCTAT-TACAGCATAATATACAAGTCTGTGAAcggtggctcacgcctgtaacccagcactgcaggaggccaaggcgggtggatcacacgaagtcagcagttcgagaccagcctggccaacatggtgaaaccctgtctctaggaaaaacacaaaaattagccgaacatggtggtgcatccctgtaatgccagctcctactctggaggatgaagcaggagaatgacttcaacccaggaggtggagtttgcagtgagtggagattgcatcactgcactccagcctgggtgacacaaggagactccgtctcaaaaaat-aaaaataagaaaTGCATAAATATAAATATAATATAACACACGCAAATGACAAAGGGACCTGAATTCCAATCATGATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGGCAATGAGCCTAAAACCTCTTCCCTATTTGGCTTTCTGTGAGCATGAGATCATATAGAAAATGTGAAAGCCCGCTGAATCCTCCAGCACAGATCCTGGAATACACAAAGTG s panTro4.chr19 59713778 959 + 63644993 ggagagcACACTGGGTACACAGGAAACTAAGGAGGAACAAGGGGTGTGTGTTTGACACTCACAGCCATTGGATTCACCTCGGGT-TAACCAGGAATCCGTACATGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGTGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGATTTTGACACTAAGTGGATGAAGCAGATGGATATAAGATATGCTTGTGAGGTAGAATCATTGGCTGGAAAGGCTTGCTGGGTTTGA-TTTTCCTACTTGTTCAATCCTCGCTTAATTAAATTCTTTCTGAGATTTA--TGCATCCTACACATAAACCAATAACTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGGGACCTAT-TATAGCATAATATACAAGTCTGTGAAcggtggctcacacctgtaacccagcactgcaggaggccaaggcaggtggatcacatgaagtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctaggaaaaatacaaaaattagccgagcatgctggtgcatccctgtaatcccagctcctattctgcaggatgaagcaggagaatgacttcaatccaggaggtggaggttgcagtgagtggagattgcatcactgcactccagcctgggtgacacaaggagactccatctcaaaaaat-aaaaataagaaaTGCATAAATATAA------TAAAACACACACGAATGACAAAGGCACCTGAATTTCAATCATCATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGGCAATCAGCGTAAAACCTCTTCCCTATTTGGCTTTCTGTGAGCATGAGATCATATAGAAAATGTGAAAGCCCGCTGAATCCTCCAGCACAGATCGTGGAATAGAGAAAGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56624986 959 + 60714840 GGAGAGCACACTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTGATACTCACAGCCATTGGATTCAACTCAGGG-TAACTAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCATAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCTGCCCCACTGGTGAAATGTGGTGCTGATTTAGACACTAAGTGGATGAAGCAGATGGATATAAGATATGTTTGTGAGGTAGAATCATTGGCTGGAAAGGCTTGCTGGGTTTGA-TTTTCCTAGTTGTTTAATCCTAGCTTAATTAATTTCTTTCTGAGATTTA--TTCCTCCTACGCATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGGGACCTAT-TATAGCATAATATACAAGTCTGTGAAcggtggctcactcctgtaacccagcactgcaggaggccaaggcgggtggattccatgaagtcaggagttcgagaccagcctggccaacatggggaaaccctatctctactaaaaatacaaaaattagctgagcatggtgatgcatccctgtaatcccagctcctactctggaggatgaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtagagattgcatcactgcactccagcctgggcgacacacggagactctgtctcaaaaaat-aaaaataagaaaTGCATAAATATAA------TAAAACACACACGAATGACAGAGGCACCTGAATTCCAATCATCATTTTTCTATTTCTCTATAATTacttctttgatcctttatcttatccattaggcaatcaccctaaaacctcttccctatttggttttctgtgagcatgagatcatatagaaaatgtgaaagcccgctgaatcctccagcacagatcctggaacacagaaagtg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55631301 957 + 59248254 AGAGAGCACACTGGGCACACAGGAAACTAAGAAGGAACAAGGAGTGTGTGTTTTATACTCTCAGCCCTTGGATTCAACTCAGGGCTAACTAGGAATCCCTAAGTGATTAATAGTGACTGACGTGAAAATAAAGGAGGCCCCGGTGCGTAACTGGAATCTAGGAGATTGTCGAAAAGGCAATTCCCACCCCACTGGTGAAATGTAGAGTTGATTTACACACTAAATGAATGAAAG--ATGGATATAAGATATGTTTGTGAGGTAGAATCATTTGCAGGGAGGTCTTGCTGGGTTTGATTTTTCCTAGTAGTTTAATCCTTGTTTCATTAATTTCTTTCTGAGATGTATTTTTTTTCTACATCTAAATCAATACCTGGCAGAGGAGTAATGGACACATGAGGGGTGGTGCAAATGAAAGGACCTAG-TATAACATAATATACGAGAC--TGGATgggggctcatgcctgtaacccaacacttttggatgccaaggtgggtgcatcctttgagggtaggagtttgagaccagcctggccaacatggtgaaaccctgtgtgtgctaaaaatacaaaaattagcctggtgcattggcacgtgcctgtaatcccag---ttactagggaggctgaagcaggagaatggcttcaaccctggaggcagaggtttcagtgagctgagatggtgccactgcactccagcctgggcaacacagggggactctgtctcaaaaaataaaaaataaaaaaTACATAAATATGA------TATAACATACACAAATTACAAAGGCACCTGAATGCCAACCATCATTTTTCTACTTCTCTGTCTTTAATTCTTTGACCCTTTATCTTATCCATTAAACAATCAGGCTAAAACCTCTTCCTTATTTGGCTTTCTGTGAGTTTGAGATCATACAGAAAATGTGGAAGCCCCCTGAACCCACCAACGCAGGCCCTGGAATAGAGAATGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47720911 959 + 51301725 ggagagcacACTGGGCACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTTATACTCACAGCCATTGGATTCACCTCAGGG-TAACTAGGAATCCCTACATGATTAATAGTGACTGACATGAACATAAGGGAGGCCCAGGTGTGTAACTGGAATCTAGGAGACCGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGATTTAGACACTAAATGAATGAAGGACATGGATACAGGATATGTTTGTGAGGTAGAATCATTTGCAGGGAGGACTCACTGGGTTTGA-TTTTCCTAGTTGTTTAATCCTTGCTTAATTAAATTCTTTCTGAGATTTA--TTCCTCCTACACATAAATCAATACCTGGCAGAGGAGTGACAGATAGATGAGGGGTGGTGGAAATGAAGGGACCTAATTACAACATAATATACAAGGCTGTGAACGGTTGCTCATGCCTCTAACCCAGCActgcaggaggccaaggcaggtggattccatgaagtcaggagttcaagaccagcctggccaacatggtgaaaccctatctctaataaaaatacaaatattagctgagcatggtggtgcatgcctgtaatcccagctcctactctggaggaggaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtcgagatcacatcactgcactccaacctgggtgactcaaggagactccgtctcaaagaat-aaaaataagacatgCATAAATATAA------TGTAACACACATGAATGACAATGGCACCTGGATTACCAtcatcatttttctatttctctataatTACTTCTTTGATCCTTTATCTTATCTATTAGGCAATCAGCCTAAAACCTCTTCCCCATTT-GCTTTCTGTGAGCTTGAGATcatatagaaaatatgaaagcTCCCTGAAGCCACCAGCACAGGTCCTGGAATAGAGGAAGTG i papAnu2.chr19 C 0 I 29004 s chlSab2.chr6 47463719 953 + 50890351 GAAGAGCACACTGGGCACACAGGAAACTAAGGAGG-ACAAGGAGTGTGTGTTTTATACTCACAGCCCTTGGATTCACCTCGGGC-TAACTAGGAATCCCTACGTGATTTATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCCACCTCACTGGTGAAATATGTTGCGTATTTAAACACTAAATGAATGAAGTGGATGGATACAAGATGTGTATGTGAGGTAGAATAATTCACAGGGAGGGCTTGCCTGGTTTGATTTTTCCTAATTGTTCAATCTTCACTTCATTAATTTCTTTCTGAGATTTA--TTTTTCCTACATGTAAATCAATACCTGGCAGAGGACTGATTGATACATGAGGCGTGGTGCAAAGGAAGAGACTTAT-TATAATATAACACGCAAGGTTGTGAAcggtggctcacacctgtaacccaacattttgggaggctgaggcggatggatccattgaggtcaggagttcaagaatagcctggacactatgctcaaaccc-aagtctactaaataaacaaaaactagctgggtgtggtggcgcatgcctgtaataccag---ctattcgggaggctgaagcaggagaatggcttccacccgcgaggcagaggtttcagtgagccgagatcgc-tcattggactacaccctgggtgacagagtgagactctatctcaaaaaat-aaaaatacaaaaCACATAAATCTAA------TATAGCATACAGGAATGACAAAGGCACTTCAATCCCAATTATCATTTTTCTGTTTCTCTATAACGACTTCTTTGATCCTTTATCTTATTCATTAGAAAATCAGCCAAAAACGTCTTCCCTATTT-GCTTTCTGTGAGCCTGAGATCATATGGGAAATATGAAAGGCCCCTGAACCCACCAGCACAGGCCCTGGAATAGAGAAAGTT i chlSab2.chr6 I 6918 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=1643516.000000 s hg38.chr19_GL949747v2_alt 474469 1531 + 729520 CTCTGTTCATCACAAAAAAAACATGCCCTCTCACCCAAATCCCCCACCTCACCCCTACTTCCAATCATCTGTGGAGATTCAGATAGGCCATGGGGAGGTAAATTCTAATACTCCTTGGAGTGAGTCCAGATCTTGGAATCAGAGATCAGCGTCAGCACTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTATTGAAGCAATAGATGGCCGAGGGTGTGGTCCTT-CCCCCAGCCTCTGGGGTAGAACAGCAGCCTAACATGTGTCTCCTGAGATCACAAAGAGTAGCACGTTTCACATGGGCTTCAACACTATTTCCTGGCCATTTGACATAAGAGAATTCTACTTCG-CTTTTTTTATCTTGATTTCACTTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTGACTCAAGAATGCCGTGGATGTATAAATCCTAAAGCACATTCGCTGTGTATCAATCCCAGTGCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGGactgcacctgggcctatgccaattcctatcactcaccgtcactccaggaagacagaacacacagagaatacattacac-aggcaggttcattactaacagataagcagcgagtgacaacagaagcctacatttcaatgtgagccagtccctcaaggctcagaaaagctgctcgggacatatggagtcaccccatttgcagtgtagctgggggaagccagaaagcagcccagcctgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacgccttcctccaggaagaacaggaagacagcccaggctgttctgagacattcctcctgatctcaggacgttgctgtcgtagtttttttttgttgctctaaaggaaaacttgagcctcggtaacttctaaagaaaagagatcggtttgcctcaccgttctgcaggctgtactggaagcatggcaccagaatctatttcttgtgacggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgcagagaccgcagagatcacacggcaagagagagagtaagggggagggggagcgatggagcttccaagctcttttgaacaaccagctctccgg-gaactaatagagggggaacttgctaaccccgtctccttgggacagcattgttctgttcatgatggatccacctccatgacccaaacacctcccaagaggcccaacctcccacagtgggggtgaaatttccatgtgaggtttgaaggggtcagacatctcaactaaagtagttgtatcctcagcacgttctatggttactatgagagctataattgagaaagcaggggaaagctaggtcTCCCACCATTTGGGTGCTTGTCCTAAAGAGACGTTGTATGTGGTTACCTGTCAATCAAGAAATGCGAGACAATTCATAAAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCCTCTTCTTCCAGGTAACCCCAGACACCTACACG s panTro4.chr19 59714737 1530 + 63644993 CTCTGATCATCGCAAAAAAGACTTACCCTGTCACCCAAATCCCCCACCTCACCCCTACTTCCAATCACCTGTGGAGATTCAGATAGGCCATGGGGAGGTAAACATTAATGCTCCTTGGAGTGAGTCCAGATCTTGGAATCAGAGATCAGCGCCAGCACTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTATTGAAGCAATAGATGGCCGAGGGGGTGGTCTTT-TCCCCAGCCTATCGGGTAGAACAGCAGCCTAACATGTGTCTCCCGAGATCACAAAGAGTAGCACGTTTCACACGGGCTTCAACACTATTTCCTGGCTGTTTGACATAAGAGAATTCTACTTCG-CTTTTTTTATCTTGCTTTCACTTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTGACTCAAGAAAGCTGTGGATGTAGAAATCCTAAAGCACATTCGCTGTGTATCAATCCCAGTGCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGGACTGCACCTGGGTCTATGCCAATTCCTGTCACTCACCGTCACtccagggagacagaacacacagagaatacgttatat-aggcaggttcattactaacagataagcagcgagtgacagcagcagcctacatttcaatgtgagccagtccctcaaggctcagaaaagctgctcgggacatatggagtcaccccatttgcagtgtagctgggggaggccagaaagcagcccagcctgggttttgtaccctggagccacaggaagccctcagctaaagcactgcatgacgtcctcctccaggaagaacaggaagacagcccagcctgttctgagacgttcctcctgatctcaggacgttgctgtcttagtccatttttgttgttctaaaggaacacttgagcctgggtaacttctaaagaaaagagattggtttgcctcaccgttctgcaggctgtactggaagcatggcaccagcatctatttcttgtgacggcctcaggctgctccccctctggcagaagggaaggagggtctgtctgtgcagagaccacagagatcacacagcaagagagggagcaagggg-agggggagcaatggagcttccaagctcttttgaacaaccagctctccag-gaactaatagagggggaacttgctaaccccgtctccttgggacagcattgatctgttcatgatggatccacctccatgacccaaacacctcccaagaggcccaacctcccaccctgggggtgaaatttcaatgtgaggtttgaaggggtcaaacatctcaactaaagtagttgtatcctcagcacattctatggttactatgagagctgtaactgagaaagcaggagaaagctgggtctcccaccatctggatgcttgtcctAAAGACATGTTGTATGTGGTTACCTGTCAATCAAGAAATGCAACACAATTCATAAATAGGAACTGCCATGATTAGCTTCTTATTGGTGTCTCCTCTTCTTCCAGGTAACTCCAGACACCTGCACG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56625945 1513 + 60714840 ctcTGTTCATAGCAAAAAAAACTTGCCCCCTCACCCAAATCCCCCACCTCAGCCCTACTTCCAATCACCTGTGGAGATTCAGATAGACCATGGGGAGGTAAACATTAATACTCCTTGGAGTGAGTCCAGATCTTGGAATCAGAGATCAGCGCCAGCACTAGCTCCTGCTCCCCTTTCATACTAATTCACAGGAGGACAGGTGGTATTGAAGCAGTAGATGGTGGAGGGGGCGGTCCTT-CCCCCAGCCTCTCGGGTGGAACAGCAGCCTAACATGTGTCTCCTGAGATCACGAAGAGTAGCACGTTTCACACGGGCTTCAACACTATATCCTGGCTGTTTGACATAAGAGAATTCTACTTCG-CTTTTTTTATCTTGATTTCACGTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTCACTCAAGAATACTGTGGATGTAGAAATCCTAAAGCACATTCGCTATATATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGTACTGCGCCTGGGCCTATGCCAATTCCTATCACTCACCGTCACTCAAGGgagacagaacacacagagaatacattacat-aggcaggttcattactaacacataagcagcgagtgacaagagaagcctacatttcaatgtgagccagtccctgaaggctcagaaaagctgctcgagacatatggagtcacttcatttgcactgtagctgggggaagccaaaaagcagcccagcctgggttttgtacccaggagccacaggaagcactcagctaaaacactgcatgatgtcctcctccagggagaacaggaagacagcccaggctgttctgggacattcctcctgatctcaggatgttgctgtcttagtccatttttgttgctataaaggaacacttgagcctgggtaacttctaaagaaaagagatttgtttgcctcacagttctgcaggctgcactggaagcacggcaccagcatctatttcctgtgacggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgc--agaccacagagatcacacggcaagagagggagtaagggggagggggagcgatggagcttccaagctctttttaacaaccagctctcca----------------ggaacttgctaaccccgtcg-tttggggcagcattgatctgttcatgatggatccacctccatgactcaaacaccttcccataggcccaaactcccaccctgggggttaaatttcaatgtgaggtttgaaggggtcaaacatctaaactaaagtagttgtatcctcagcacgttctatggttactatgagagctataactgagaaagtgggagaaagctaggtctcccgccatctgggtgcttgtcctAAAGAGACGTTGTATGTGGTTACCTGTCAATCAAGAAATGCGAGACAATTCATCAAGAGCAACGGCTATGATTAGCTTCTTATTGGTGTCTCGTCTTCTTCCAGGTAACCCCAGACACCTGCACG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55632258 1529 + 59248254 CTCTGTTCATGGTATAAA--ACTTGCCCTGTCACCCAAATCCCCCACCTCACTCCTACTTCCAATCACCTGTGGAGATTCAGATAGATCATGGGGAGATAAAAACCAATACTCTTTGGAGTGAGCTCAGATCTTGGACTCAGAGACCAGCGCCAGCACTATCTCCTGGTCACATTTCGTACTAACTCACAGAAGAACAGGCTGTATTGAAACAATAGATGATGGAGGTGGTTGTGCTT-CCCACTGCCTCTCAGGTAGAACAACAGCTTAATA-ATGTCTCAGGAGATCACAAAAAGTAGCACGTTATTCCTGGGCTGCATCATTATTTCATGGCTGTTTGATTTAAGTCAGATTTACTTCACCTTTTCTGATCTTGATTTCACTTTTTATTTCTTTTCTTGGAGAATGTAATTTTTTTGAGTCAAGAGGGTTGTGGCTGTAGAAATTGTAAAGCACATTCACTGTGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTaaacacctcctgtactgcacctggggctatgccagtttctatccctcaccgtcactccagggagacagaacacacagagaatacatgacat-aggcaggttcattactaacacataagcagcaactgacaacagaagcctatatttcgatgtaagccagtcccccaaggctcagaaaagctgttcgggatatatggagtcaccccatttgcactgcagctgggggaacccacaaagcagccctgcctgggttttgtaccctggagccacaggaagcactgagctaaagcactgcatgacgtcctcctctgggaagaacaggaagacagcccaggctgttctgggacgttcctcctgatctcaggatgttgccgtcttagtccctttttgaggctataaaagaacacttgagcctgggtaacttctaaagaaatgagatttgtttgcctcacagttctgcaggctgtactagaagcatggaaccagcatctatttcttctgatggcctcaggctgctcccactctggcagaaaggaaggagggtctgtgtgtgcagagaccacagagatcacacagcaagagagggagcaaggggaagagggagcgatggagcttccaagctctttttaacaaccagctctccag-gaactaatagagggagaacttgctaaccctgtctccttgggacagcattgatctattcacgatggatccacctccatgacccaaacacctcccaagaggcccaacctcccacactgggggttaaatttcaatgtgaggtttcaaggggtcaaacatctaaactaaagcagtggtatcctcagcacattctatggttactatgagagctataagtgagagaggaggagaaagctgggtcTCCTGCTATCTGGCTGTTTGTCCTAAAGAGACGTTGTATATGGCTACCTGTCAATCAAGAAATGCGAGACAATCCATAGAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCGTCTTCCTCCAGGTATCCCCAGACACCTGCATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47750874 1515 + 51301725 CTATGTTCATGGCATAAA--ACTTGCCCCCTCACCCAAATCCCCCACCTCACCTCTACTTCCTATCACATTAAGAGACACAGATAGACCGTGGGAAGGTAAAAACTAATATTCTTTGGAGT----TCAGATCTTGGACTCAGAGACCAGCATCAGCACCATCTCCTGGTCACCTTTTATACGAATTCACAGAAGGACAGGTTGTACCAAGGCAATAGATGATGGAGGGGGTTGTCCTT-CCTCCGGACTCTCAGGTAGAACAGCAGCCTAATATAGGACTCCCGAGATCACAAAAAGGAGCCCGCTCTTCACGAGCTTCATCATTATTTCCTGGCTGTTTGATATATTTCAGTTCTACTTCA-CTGTTTTGATCTTGATTTCAC--TTTATGCCTTTTCTTGCCAAAAATAATGTGTTTGAGTCAAGAGGGTTGTGGCCGTAGAAATTGTAAAGCACATTCACTGAGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGTACTGCACCTGGGGCTATGCCAGTTTCTATCACTCACGGTCACTCCAGGGAGACAAAACACACAGACAATACATGACATAAGGTGGGTTCATTACTAATACATAAGCAGCAACTGACAACAGAAGCCTACATTTCAATGTGAGCCAGTCCCCCAAGGCTCAGAAAAGCTGCTCGGGACATATGGAGTCACCCCATTTGCACTGCAGCTGGGAGAACCCAGAAAGCAGCCCGGCCTGGGTTTTGTACCCTGGAGCCACAGGAAGCACTGAGCTAAAGCACTGCATGGCGTCCTCCTCTGGCACGAACAGGAAGACAGTCCA-GCCGTTCTGGGACATTCCTCCTGATCTCAGGACGttgctgtcttagtccatttttgaGGATGTGAAAGAACATTTGAGCCTGGGTAACTTCTACAGAAAACAGATTTGGTTGGTTCACGGTTCTGCAAAGTGTACAAGAGGCAGGACACCAGCATCTATTTCTGGCTGCGGCCTCAGGCTGCTCCTACTCTGGTAGAAGAGAAGG-GGGCTTCCATGTGCAGAGACCACCGAGAGCACACGGCAAGACAGGGAAAAACG------GGGTGTGATGGAGCTTCCAAGCTCTTTTTAAGAACCGAGTCTCCAGAGTACTAATAAAGGGAGAA-TTGCTAACCCTGTCG-TGTGGGGGAACATTAATCTATTTATGatggatccacccccatgacccaaacacctcccaataGGCACCACCTCCCACACTCAGGGTTAAATTTCAGAGTGAAGTTTCGGGGGGTCAAATATCCATACGATAGCAGGTGTCTCATCCGCACATTCTGTAGTTATTACGAAAACTATAACTGAGAAAGCAGGAGAAAGCTGGGTCTCCCACCACGTGGGTGCTTGTCCTAAAGAGATGTTTTATGGGGTTGCCTGGCAACCAAGAAATGAGAGACAATCCACAAAGAGGAACTGCTATGGTGAGCTTCTCATTGGATTCCTATCTTCCTCCAGGTATCGCCAGACACCTGCCTG i papAnu2.chr19 I 29004 I 278 s chlSab2.chr6 47464672 1516 + 50890351 CTCTGTTCATGGCATAAA--ACTTGCCCCCTCAGCCAAATCCCCCACCTCACGCCTACTTCCTATCACATTAAGAGACACAGATAGACCGTGGGAAGATAAAAACTAACATTCTTTGGAGG----TCAGACCTTGGACTCAGAGACCAGTGCCAGCACCATCTCCTGGTCACCTTTTGTACGAATTCACAGAAGGACAGGTTGTACCGAAGCAATAGATGATGGAGGGGGTTGTCCTTGCCCCCGGACTCTCAGGTAGAACAGCAGCCTAATATATGACTCCCGAGATCAC-AAAAGTAGCACGTTCTTCACAAGCTTCATCATTATTTCCTGGCTGTTTGATATATGACAGTTCTACTTCA-CTGTTTTGATCTTGATTTCAC--GTTATTCCTTTTCTTGCTGAATGTAATGCGTTTGAGTCAAGTGGGTTGTGGCTGTAGAAATTGTAAGGCACATTCACTGTGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGTactgcacctggggctatgccagcttctatccctcaccgtcactccagggagacagaacacacagagaatacatcacgtaaggtgggttcgttactaacagataaccagtaagtgacaacagaagcctgcatttcagtgtgagccagtcccccaaggctcagaaaagctgctcgggacatatggagtcactccatttgcactgcagctgagggaacccagaaagcagcccagcctgggttttgtaccctggagccacaggaagcactgagctaaagcactgcatgacgtcctcctctgggacgaacaggaagacagccca-gctgttctgggactttcctcctgatctcaggatgttgctgtcttagtccatttttgtggctgtaaaagaacacttgagcctgggtaacttctacagaaaagagaattggtcgactcacggttctgcaagctgtactagaggcaggacatcagcatctatttctggctgcggcctcaggctgctcctactctggtagaagagaagg-gggcctacatgtgcagagaccaccgagatcacacggcaagacagggagaaacg------gggtgtgatggagcttccaagctctttttaagaaccaactctccagagtactaatagagggagaacgtgctaaccctgtcg-tgtggggcagcattaatctattcatgatggatccacccccatcacccaaatacctcctgataagaccaacttcccacactcagggttaaatttcaaagtgaaacttcggggggtcaaatatccatacgatagcaggtgtctcatcggcacattctgtggttattatgaaaactataactgagaaaccaggagaaagctgggtcTCCCACCACGTGGGTGCTTGTCCTAAAGAGATGTTTTATGGGGTTGCCTGGCAACCAAGAAATGAGAGACAATCCACAAAGAGGAACTGCTATGGTGAGCTTCTCATTGGATTTCCATCTTCCTCCAGGTATCACCAGACACCTGCCTA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=1519253.000000 s hg38.chr19_GL949747v2_alt 476000 1305 + 729520 TTCTGATTGGGACCTCAGTGGTCAAACTCCCTTTCACCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAAAGTAAGTCTCACGAAGCAGAGGCCAGAGAGCTCAGGGCCATGTGGG----------GAAGCAGGATGGTAGCACGCGGGTGTGTGTTCCTCACAGGCAGGATGGTCCCTGGCCCAAGGCAGGAGCCACAGAGGCAGGACTTTCTAGAGAGAGCACCAGATTCCCTTCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTACCCTCACGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGATAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTGAGCTCAGAGAGATAGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGCACCTATGGCCTCCCCCTGTTTGTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGCCCTCCGAGCTGTTTTGTTGACTTCCATCTTCTACAGATGCATCTGTAATGGACCAAGGGCCTGCGGGGAACAGAACAGTGAACAGGGAGGTAGGTGCTCCTCGGCCCAGCCTCGTGG--CTAGTCTTATTCCCAAAGAGTCCTGAAAAAT-GTGAGCACCCTCCCTCACTCAGCATTTCCCTCTCTCCAGGATTCTGATGAACAGGACCATCAGGAGGTGTCATACGCATAATTGGATCACTGTGTTTTCACACAGAGAAAAATCACTCCCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAGCATGTACATAGAACTTCCAAATGCTGAGTCCAGATCCAAAGCTGTCTTCTGTCCACGAGCACCACAGTCAGGCCTTGAGGGGATCTTCTAGGGAGACAACAGCCCTGTCTCAAAACCGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGGATCGCTCTTCCtcaaaccacgaatctgaacatgcctctctcttgcttacaaatgtctaaggtccccactgcctgctggagagaaaacacactcctttgcttagcccacaattctccatttcacttgacccctgcccacctctccaacctaactggcttacttcctagt-ctacttgaggctgcaatcacactgaggaactcacaattccaaacatacaagaggctccctcttaacacagcacttagacacgtgctgttccaccttctctcatgcagttccacctcccctcAGACTATCTTTCAGCCTTCTG s panTro4.chr19 59716267 1305 + 63644993 TTCTGATTGGGACCTCAGCGGTCATCAtcctcctcatcctcctcctcttctttctcctTCATCGCTGGTGCTCCAAAAAAAAAAGTAAGTCTCACAAAGCAGAGGCCAGAGAGCTCAGGGCCATGTGGG----------GAAACAGGATGGGAACACTCAGGTGTGTGTTCCTCACTGGCAGGATGGTCCCTGGCCCAAGGCAGCAGCCACAGAGGCAGGACTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTATCCTCATGTCCCCTGTAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTGAGCTCACAGAGATAGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGCACCTATGGCCTCCCCCTGTATGTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGCCCTCCAAGCTGTTTTGTTGACTTCTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGAACAGAATAGTGAAGAGGGAGGTAGGTGCTCCTTGGCCCAGCCTCGTGG--CTAGTCTTATTCCCAAAGAGTCCTGAAAAAT-GTGAGCACCCTCCCTCACTCAGCATTTCTGTCTCTCCAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATATGCACACTTGGATCACTGCGTTTTCACACAGAGAAAAATCAATCCCCCTTCTCGGAGGCCCAAGACACCCCCAACAGATACCATCGTGTACACGGAACTTCCAAATGCTGAGCCCAGATCCAAAGTTGTCTCCTGCCCATGAGCACCACAGTCAGGCCTTGATGGGATCTTCTGGGGAGACAACAGCCCTGTCTCTAAACTGGGTTGCCAGCTCCCATGTACTAGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTCAACATGCCTCTCTCTTGCTTACAAATGTCTAAGGTCCCTACCGCCTGCTGGAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCacttgacccctgcccacctctccaacctaactggcttacctcctagt-ctacctaaggctgtgatcacactgaggaactcacaattccaaacatacaagaggctccctcttaacacggcacttaggcacgtgctgttccaccttccctcatgctgttccacctcccctcAGACTATCTTTCAGCCTTCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56627458 1303 + 60714840 TTCTGATTGGGATCTCAGTGGTCAAAATCCCTTTCACCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAAAGTAAGTCTCACGAAGCAGGGGCCAGAGAGCTCAGGGCCATGTGGG----------GAAGCAGGATGGGAGCAGGCAGGTGTGTGTTCCTCACTGGCAGGATAGTCCCTGGCCCAAAGCAGGAGCCTCAGAAGCAGGACTTTCTAGAGAGAGCACCAGACACCCTGCCTCTACCTTCAGCTGACAGACCAATGCGTGATTCGGAACTGTATCGTCATGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACACAATCAATGGGATGGGAACTCAGAGCTATTCAT-GGATGGGTCCTTGAGCTCAGAGAGATTGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGCACCTACGGCCTCCCCCTGTTTGTTGGTATCTGCTTATGAAATGAGGACCCACAAGTGCCCTCCGAGCTGTTTTCTTGACTTCCGTCTCCTACAGATGCTGCTGTCATGGACCAAGAGCCTGCAGGGAACAGAACTGTGAACAGGGAGGTAGGTGCTCCTCGGCCCAGCCTCGTGG--CTACTCTTATTCCCAAACAGTCCTGAAAAAT-GTGAGCACCCTCTCTCACTCAGCATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAACAGGTGTCATACGCATAATTGGATCACTGCGTTTTCACACAGAGAAAAATCACTCGCCCTTTTCAGAGGCCCAAGACACCCCCAACAGATACCAGTGTGTACACGGAACTTCCAAGTGCTGAACCCAGATCCAAAGTTGTCTCCTGCCCATGAGCACCACAGTCAGGCCTTGATGGGATCTTCTCGGGAGACAACAGGCCTGTCTCAAAACCGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGCATCGCTCTTCCTCACACCATGAATCTGAACGTGCCTCTCTCTTGATTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACT-GTTTGCTTAACCCACAATTGTCCATTTCacttgacccctggccacctctccagcctaactggcttacttcctagt-ctacttgaggctgcggtcacactgaggaactcacagttccaaacatacaagaggctccctcttaacacggcacttacacacgtgctgttccacctcccctcatgctgttccacctttccacagactattttccagccttctc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55633787 1303 + 59248254 TTCTGATTGGGACCTCAGTGGTCATCATCCCCTTCACCATCCTCCTCTTCTTTCTCCTGCATCGCTGGTGCTCCAACAAAAAGAGTAAGTCTCACGAAGCAGAGGCCACAGACCTCAGGGCCGTGTGGG----------GAAGTGGGATGGGAGCACGCAGGTGTGTGTTTCTCACTGGCAGGATGGTCTCTGGCCCAAGGCAGGAGCCACAGAGGCAGAGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGGCAGAATCACTGGGATGGGAACTCAGAGCTATTCATGGGATGAGTCCTTGAGCTCAGAGAGATAGAATGTCTGAGTCTGGCTGTTGGCAACTGAGGGACCTCAGGCACCTATGGCCTCCCCCTGTATCTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGTCCTCCCAGCTGTTTTGATGACTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTTGCCCCAGCCTCATGGATATAGTCTTATTCCCTAAGAGGCCTGAAAAATAGGAAGC-CCCTCCCTCACTCAACATTTCCCTCTCTCCAGGACTCTGATGAACCAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACCGCGTTTTCACACAGAGAAAAATCGCTCGCCCTTCTCAGAGGCCCAAGAGACCCCCAACAGATACCAGCGTGTACATAGAGCTTCCAAATGCTGAGCCCAGATC----ATTGTCTCCTGCCCGTGAGCACCAGAGTCAGGCCTTGAGGGGGTCCTCCAGGGAGACAACAGCCCTGTCTCAAACCCAGCTTGCCAGTTCCAATGTACCAGCAGCAGGAATCTGAAGGTGTGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACGTGCCTCTCTCTTGCTTGCCAATGTCTAAGGTCCTCACTGCCTGCTGGAAAGAAAACACACTCCCTTGCTTAGCCCACAATTCTCCActtcacttgatccctgcccacctctccaaccta-ctggcttacttcctagtcctactggaggctgcgatcacactgaggaactcacaattccaaatatacgagaggctccctcttaacacggcacttagacatgtgctgttccaccttccctcatgctgttccacctcccctcAGACTATCTTTCAGCCTTCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47752667 1297 + 51301725 TTGTGATTAGGTACTCGGTGGCCACCATCTTCCTCAccatcctcctcttctttctcctttgttgcTGGTGCTCCGACAAAAAGAGTAAGTCTCACGAAGCAGAGGCCAGAGACCTCAGAGCCGGGTGGG----------GAAGCGGGATGGGAGCACGCAGGTGTGTGTTCCTCACCAGCAGGATGGTCTCGGGCCCCAGGCaggagccacagaggcagagctttcTAGAGAGAGCATCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGGCAGAATCACTGGGATGGGAACTGACAGCTCTTTATGGGATGGGTCCTTCAGCTCAGAGAGATAGAATGTCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCAGGCACCTACGGCCTCCCGCTGTGTGTTGGGCTCTGCACATGAAATGATGACCCAGACGTGCCCTCCCAGCTGTTTTGATGACTTCCGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGTGGGGGACAGAACAGTCAACAGGGAGGTAGGtcctcctctccccagcctcaTGGATATAGTCTTATTCCCTACTAGTCCTGAAGAAT-GTGAGC-CCCTCCCTCACTCAACATTTCCCTCTCTGCAGGACTCTGATGAACCAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTTCCACACAGGGAAAAACCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAGCGTGTACATAGAGCTTCCAGATGCTGAGCCCAGATC----GTTGTCTCCTGCCAACGAGCACCACAGACAGGCCTGGA-GGGGTCTTCTAGGGAGACAacagccctgtctcaaaaccagcTTCACAGTTCCA--GTGCCAGCAGCTGGAATCTGAAATCTCGACTCTGCATCTTAGAGCATCGCTTTTCCCCACACCACAAATCTGC---TGGCTCTGTCTTGCTTACCAATGTCTGCGGTTCCCACTGCCTGCTGGAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCACTTCACTTGacccctgcccacctctccaaCCTACCTGGCTTACTTCCTAGTCCTACTGGAGGCTGCAGTCACACTGAGGAACTCACAATTCCAAACATACAAGAGGCTCCCTCTTAACACGGCACTTAGATTCATGCTGTTCCACCTTCCCTCATGCTGTTCCACCTCCCCTCAGACAATTTTTCAGTCTTCTG i papAnu2.chr19 I 278 C 0 s chlSab2.chr6 47466188 1312 + 50890351 TTGTGATTAGGTACACGGTGGCCACCATCATCTTCACCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAGAGTAAGTCTCACGAAGCAGAGGCCAGAGACCTCAGAGCTGTGTGGGGAGGACGGATGAGGAGGGATGGGAGCACGCAGGTGTGTGTTTCTCACTGGCAGGATGGTCCCTGGCCCAAGGCAGGAGCCACAGAGACAGAGCTTTCTACAGAGATCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCTTGATTCTGAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAAGCAGAATCACTGGGATGGGAACTGACAGCTCTTCATGGGATGGG-CCTTGCACTCAGACAGACAGAATGTCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCAGGCACCTACAGTCTCCCCCTGTGTGTTGGTATCTGCACATGAAATGAGGACCCAGAAGTGCCCTCCCAGCTCTTTTGATGACTTCCGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCGGGGGACAGAACAGTGAACAGGGAGATAGGTCCTCCTGAGGCCAGCCTCATGGATATAGCCTTATTCCCTACTAGTCCTGAAGAAT-GTGAGC-CCCTCCCTCACTCAACATTTCCCTCTCTGCAGGACTCTGATGAACAAGACCCCCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTTTTACACATGGAAAAATCACTCGCCCTTTTCAGAGGCCCAAGGCACCCCCAACAGATACCAGCGTGTACATAGAGCTTCCAGATGCTGAGCCCAGATC----ACTGTCTCTTGCCCACGACCACCACAGACAGGCCTGGAGGGGGTCTTCTAGGGAGACAACAGCCCTGTCTCAAAACCAGATTACCAGCTCCAATGTACCAGCAGCTGGAATCTGAAATCTCGACTCTGCATCTTAGAGCATTGCTCTTCCTCACACCACGAATCTGAACATGCCTCTTTCTTGCTTACCAATGTCTGTGGTTCCCACTGCCTGCTGGAGAGAAAACGCACTCCTTTGCTTAGCCCACAATTCTCCACTTCACTTCACCCCTGCCCACCTCTCCAATCTAACTGGCTTACTTCCTAGTCCTACTGGAGGCTGCAGTCACACTGAGGAACCCACAATTCCAAACATACAAGAGGCTCCCTCTTAACACAACACTTAGACATGTGCCGTTCCACCTTCCCTCATGCTGTTCCACCTCCCCTCGGATGATTTTTCAGTCTTCTG i chlSab2.chr6 C 0 T 64191 e calJac3.chr22 45773030 1697 + 49145316 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=80255.000000 s hg38.chr19_GL949747v2_alt 477305 93 + 729520 TCAGCAGTAAAACTTATAAATTGTTTTTAGTAATTTCAATGTAGTTTTCCCTCCTTCAAATAAACATGTCTGCCCTCATGG-TTTCGGTAATGG s panTro4.chr19 59717572 93 + 63644993 TCAGCAGTAAAACTTATACATTTTTTAAAATAATTTCAATGTAGTTTTCCCTCCTTCAAATAAACATGTCTGCCCTCATGG-TTTCGGTAATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56628761 92 + 60714840 tcagcAGTGAAACTTATAAAGTTTTTT--GTGATTTCAATGTAGCTGTCTCCTCTTCAAATAAACATGTCTGCCCTCATTGCTTTAGGTAATGT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55635090 93 + 59248254 TCAGCAGTAAAACTTACAAATTTTTAAAAATAATTTCAATGTAGTTGCCTCTTCTTCAAATAAACATGTCTACCCTCATGG-TTTCAGTAATGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47753964 87 + 51301725 TCATCAGTAAACCTTATAAaaattt-gttatgatttctatgTAGCTCTCTCATCTTCAAATAAACGTGACTGTCCTCATTC-TAT-----AGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47403309 93 + 50890351 TCAGCAGTGAAACTTACAAATTTTTAAAAATAATTTCAATGTAGTTGCCTCTTCTTCAAATAAACATGTCTACCCTCATGA-TTTCAGTAATGT i chlSab2.chr6 T 64191 I 64183 e calJac3.chr22 45773030 1697 + 49145316 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=430919.000000 s hg38.chr19_GL949747v2_alt 477398 378 + 729520 GACTCTTTTCTTGCCTAAGGCTTCTGGTGTTATCATTACCATGTCCACATAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAA-CAGGGTGGACCCTGACTTGTCTCTGAGACTCCAATTTCCATCCAAAGATGCAGCACATAGGAAGTTCCAAGGATCGTGAATCACATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCATGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGGACACATGTCAACGCATCATCTTTCATACTATAAATATAcagtcgctcctccgtatctgtggggtttacaggtgtttattgaac s panTro4.chr19 59717665 379 + 63644993 GACTCTTTTCTTGCCTAAGGCTCCCGGTGTTATCAGTACTATGTCCACGTAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAGGGTGGAGCCTGATTGGTCTCTGAGACTCCAATTTCCATCCAAAGATGCAGCACACAGGAGGTTCCAAGGATCGTGAATCAGATGAACAAGTCATATTCTTACTCCCTGCAGACCTGCAAAGCTGGCAGAGTCATTCCATGATGAAACATTTGTAGAGTCATAAGCCCTGTTAGTCTCATCTCCACAGGGACACACATCAACACATCATCTTTCATAATATAAATATAcagtcactcctccatatctgtggggtttacagctgtttattgaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56628853 378 + 60714840 GACACTGTATTCCCTAAAAGAAACCGCTGTTATCATTACCATGTCCACGTAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAACAGGGTGGAGCCTGATTTGTGTCTGAGACTCCAATTTCCTTCCAAACATGCAGCACATAGGAGGTTCCAAGAATCGTGAATGAGAT-AACAAGTGATATTCTTACTCTCTGCAGACCTGCAAAGCCGGCAGAGTCATTCCACAATAAAACATTTGCAGAGTCATAGGTCTTGTTAGTCTCATCTCCACGAGGACACATATCAACACATCATCTTTCATACTATAAGTATAcagtcactcctctgtatctgtggggcttacaggtgtttattgaac i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55635183 379 + 59248254 GACTCTTTTCTTGCCAAAAGTTTCCAGTGTTATCATTACTATGTCCATGTAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAGAGTGGAACCTGGTTTCTGTCTGGAACTCCAATTTCCTTCCAACGATGCAGCGCATAGGAGGTTGCAAGGATCGTGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTGTCATCTCCACGGGGACACATGTCCACACATCATCTTTCATACCATAAATACAcagtcgctcctctagatctgtggggtttacaggtgtttattaaac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47754051 378 + 51301725 AACTCtttttttGCCTAAAGTTTCTGGTGTTATCATTACTATGTCCATATAACCCCATATGTTCTCCACTGGGTTCTCACCCCTCGACTCTGAGCTTTTGGAAGCAAGGTGGAGCCTGATTTCTGTCTGGAACTCCAATTTCCATCCAATGATGCAGTGCATAGGAGGTTCCAAGGGTCATGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAACATGAAACATCTGTAGAGTCATAGGCCTTGTTGGTCTCATCTCCACGGGGACACATGTCAACACATCATC-TTCATACTATAAATACACAGTCGCTCCTCCAGACCTGTGAGGTTTACAGGTGTTTGTTGAGC i papAnu2.chr19 C 0 T 29276 s chlSab2.chr6 47467585 377 + 50890351 GACTCTTTTTTTGCTGAAAGTTTCCGGTGTTAT-ATTACTATGTCCATATAACCCCATCTGTTCTCCGCTGGGTTCTCATCCCTGGCATCTGAGCTTCTGGTAGCAGGGTGGAGCCTGATTTGTCTCTGCGACTCTAATTTCCGTCCAAAGATGCAGCTCATGGGAGGATCCAAGGATCGTGAATCAGATGAACAGGCGATATTCTTACTCTCTGCAGACCCGGAAAGCTGGCAGAGCCATTCCAAGATGAAACATTTGTAGAGTCATCGGACTTGTTAGTCTCATCTCCACGGGGACACATGTCCACACGTCATC-TTCATACCATAAATACAcagtcgctcctccgtatctgtggggtttacaggtgtttattgaaa i chlSab2.chr6 I 64183 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=163463.000000 s hg38.chr19_GL949747v2_alt 477776 156 + 729520 caagtataaatcaaaaatattcaga-gaaaaagcccacaaagttccaaaaagc--aaaactgtgttgaatgcacacaaatgaggtggtgtataggctgtatcaggaattataagtaatcaagagatgatttcatgtatacaggaggatgtgcatgggtt s panTro4.chr19 59718044 159 + 63644993 caacaataaatcaaaaatattttgaggaaaaaatccccgaattttcaaaaagcaaaaaactatgttgaatcgacacaaattgagtggcgtgtaggctgtgtcaggaattataagtaatcaagagatgatttcatgtatacaggaggatgtgcatgggtt i panTro4.chr19 C 0 T 28083 s ponAbe2.chr19 56629231 156 + 60714840 caagtataaatcaaaaatattcaga-gaaaatatccacaaactttcaaaaagc--aaaactatgttgcatggacagaaatgaggtggtgtgtaggttgtatcaggaattataagtaatcaagagacgatttaatgtatacatgaggatgtgcatgggtt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55635562 153 + 59248254 caactataaatcaaaaatattcaga-g--aaaatatacaaagtttc-aaaagc--aaaactatgttgaatggacacaaatggagtggtatgtatgctttgtcaggaattataaataatctagagatgatttcatgtatacatgagggtgtgcatgggtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47725153 153 + 51301725 CAACtataaatcaaaaatattcaga-g--aaaatatacaaagtttC-AAAAGC--AAAACTATGTTGAATGGACACAAATGGAGCGGTATGTATGCTGTGTCAggaattataaataatctagagatgatttcatGTATACATGAGGATATGCATGGGTT i papAnu2.chr19 T 29276 C 0 s chlSab2.chr6 47467962 155 + 50890351 -aactataaatcaaaaatattcaga-gaaaaaatctgcaaagtttcaaaaagc--aaaactatgttgaatggacacaaatgaaatggtatgtaggttgtgtcgggaattataagtaatctagagatgatttcatgtatacaggaggataagcatggatt i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=17629.000000 s hg38.chr19_GL949747v2_alt 477932 22 + 729520 atatccaaatgctgtgtcattt s panTro4.chr19 59690120 22 + 63644993 atttgcaaactgtgttccattt i panTro4.chr19 T 28083 C 0 s ponAbe2.chr19 56629387 22 + 60714840 atatccaaatgctgtgtcattt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55635715 22 + 59248254 atatgcaattgctatgccTTtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47725306 22 + 51301725 ATATGCAATTGctatgcctttt i papAnu2.chr19 C 0 I 1228 s chlSab2.chr6 47468117 22 + 50890351 atatgcaaacgctctgccattt i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=422.000000 s hg38.chr19_GL949747v2_alt 477954 1 + 729520 t s panTro4.chr19 59690142 1 + 63644993 c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56629409 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55635737 1 + 59248254 t i macFas5.chr19 C 0 I 18155 s chlSab2.chr6 47468139 1 + 50890351 t i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e papAnu2.chr19 47725328 1228 + 51301725 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=299790.000000 s hg38.chr19_GL949747v2_alt 477955 446 + 729520 atgtaagaggcttgagcatctgcagattttagtatctgagtggagatcctgaaaccaatcacccatgaatagtgaaggatgacGGTATAGGACTTTTATTTCTCAAATTTAAATATAAATCATAAAAAATGTACAATAACTAGATAAAA-ACTAAGAAGTGTTTTtata-gtgtgagaataagtttagatttattatttcctatgtgtaaccctttggtttaatattatttattgagaagacattctatgccaccttaaaccacacggcagcctttgtcaactaaaaagggactgtgtgtacacggatgtgtattttagacactgtct-ctgctaaacggctctctgtgtccacattcttgaggatgctccactttatgtagccccatagaaccctttaa-atttagtagccagaggcctctaatttg----------------------------ttattATAGGCTATT-----TGCTAtt s panTro4.chr19 59690143 434 + 63644993 atataagaggcttgagcatctacagattttggtatctgagtggagatctcgaaaccaatcacccacgaatagtgaaggatgactgTATATGACTTTTATTTCTCAAATTTAAATATAAATCATAAAAAATGTAC---AACTAGATAAAA-ACTAAGAAGTGTTTTtata-gtgtgag-------ttagatttattttttcctaggtgtaacccattggtttaatattatttattgtgaagacattctatgccaccttaaaccacacagcagcctttgtcaactaaaaagggactgtgtgtacgcgga--tgtactttagacactgttt-ctgctaaggggctctctgtgtccacactcttgaggatgctgcactttatgtagccttataaaaccctttaa-atttagtagccagagccctctaatttg----------------------------ttattATAGGCTACT-----TGCTAtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56629410 442 + 60714840 atgtaagaggcttgagcatctgcagattttggtatctgagtggagatcctgaaaccaatcactcacgaatagtgaaggatgactgTATATGACTTTTATTTCTCAAATTTAAATATAAATCATAAAAAATGTACAATAACTAGATAAAA-ACTAAgaagtgtttttataggtgtgagaataagtgtagatttattttttcctatgtgtaaccctttggtttaatgttatttattgagaagacgttctatgccaccttagaccacacggcagcctttgtcaactataaagagactgtgtgtacaagga--tgtattttagaccctgttt-ctgctaaggggctctctgtgtccacactcttgaggatgctgcactttatgtagccttatagaaccctttaa-atttagtagccagagccctctaatttg----------------------------ttattATAGGCTATA-----TGC---t i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55653893 472 + 59248254 atgtaagaggcttgagcacctgcaggttttggtgtcagagcagagatcctgaaaccaatcacccgcgaatagtgaaggatgactgTATATAATTTTTATTCATGAATTTTAGAAATAAATCCT-CAAAATGCACAATAATAAGATAAAACAATAAGCAGTGTTTTTACA-GTGTGAAAATAAGCTTAGATTTATTTTTTCCTACGTGTAACCCTCTGGTCCAATGTTATTTATGGAGAAGACATTCTTTTCCACCTTAACCCACATGGCAGCCTCTGTCAACTATAAAGGGACTGTGTGTACACGGA--TGTATTTT--ACACTCTTTCCTGCTTAGTGGCTCTCTGTGTCCACTCTCACGAGGATGCTGCACCTTATGTAGCCTTAGAGAACCCCTTAACATTTGGTAGCCTGAATCCTCTAATTTCTCCTTCCTCTTTAAGATTGCCATTATTATTATTATAGGTTATT-----TGCTTTT i macFas5.chr19 I 18155 T 32552 s chlSab2.chr6 47468140 449 + 50890351 atgtaagaggcttgaacatctgcaaattgtggtacctgagaggagatcctgaaaccaatcacccacgaatagtgaagcacgactgTATCTAACTTTTATTTCTCAATTTTAAATATAAATCATAAAAAATTTACAATAACAAGATAAAA-AACAAGAAGTG-TTTtata-gtgtgagaataggtttagatttatttttttctatgcgtaaccgt-tgggcccatgttatctatggagaagacattctattcctccttaaaccacacggcagcctttgtcaactctaacgggactgtgtgtgcacgga--tgtattttagacactgttttccgataaggggctctctgtgttcactctcttgaggatgctgcacattatgtaggcttacacaaccccttaaaatttggtagctggagtcctctagtttC----------------------------TTATTATAGGCTATTTGCTATGCtttt i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e papAnu2.chr19 47725328 1228 + 51301725 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=240175.000000 s hg38.chr19_GL949747v2_alt 478401 519 + 729520 -tttattttcttgaggcggagtcttgctctgtcgcccaggctggactgcagtggtgcaatctcagctcactgcaacctccgcctcccaggttcaagcgattctcgtgcctcagcctcttgggtagctggtgttacaagttcctgccactgggcacggctaatttttggatttttagcagagacacggtttcactgtgtt-gccaggctgctctcaaactccttatatcagttgatccgcccacctcggcttcccgacgtgctgggGGAAACTTGATTTTCTATAGCATTATGTTACTGGATATTTCTGTAAAATTTAAAATgagggagggagagagacagagagagagCAAACTCCA-GAGTTGGGACTCTGGAAACTTGGGTCATGAGACAAATTTTAGATAAATCTACAAAAATCCAGAGTTTAAATG-TGTGGTTTTTGCTGATAACGTACAATTCAAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAATTTAAATCATTTTAACTGGTTCTGCTG s panTro4.chr19 59690577 519 + 63644993 -ttttttttcttgaggcggagtcttgctctgtcgcccaggctggactgtagtggtgcaatctcagctcactgcaacctccgcctcccatgttcaagcgattctcgtgcctcagcctcttgagtagctggcatttcaggtgcctgccaccaggctcggctaatttttggatttttagcagagacacggtttcactgtgttggccaggctgctctcaatctcctcatctcagttcatccgcccacctcggcttcccaacgtgct-gggGAAACTTGATTTTCTATAGCATTATGTTCCTGGATATTTCTGTAAAATTTAAAATGAGGGAGGGAGAGAGACAGAGAGAGAGCAAACTCCA-GAGTTGGGACTCTGGAATCTTGGGTCATGAGACAAATTTTAGATAAAACTACAAAACTCCAGAATTTACATG-TGTGGTTTTTGCTGATAAAGTACAATTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAATTTAAATCATTTTAACTGGTTCTGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56629852 520 + 60714840 -ttttttttcttaaggtggagtcttgctctgtcacccaggctatactgcaatggcacaatctcagctcactgcaaactccgccttccaggttcaagcaattctcatgcctcagcctcttgagtagctggcattacacgtgcctgccaccaggcacggctaattcttgaatttttagcagagacacggtttcactatgttggccaggctgctctcaaactcctcatctcagttgatccgcccacctcggcttcccaacgtgctgggGGAAACTAGATTTTCTATAACATTATGTTACTGGATATTTCTGTAAAGTTTAAAATGAGGGAGGGAGAGAGACAGAGAGAGAGCAAACTCCA-GAGTTGGGACTCTGGAATCTTGGGTCATGAGACAAATTTTAGATAAAACTACAAAAATCCAGAATTTACATG-TGTGGTTTTTGCTGATAAAGTACAATTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAACTTAAATCACTTTAACTGGTTCTGCTG i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47468589 523 + 50890351 tctatatttcttcaggcagagtctcgctctgtcacccaggctggactgcagtggcacaatctcggttcactgcaacttccgcctctcaggttcaagcgattctcctgcctcagcctcttgagtagctggcattacaggtgcccgccaccaggcatggctaatttttgtatgtttagcagagacatggcttcactaggttggccagggaggtctcgaactcccgacctctattgatccgtccacctcagcttcccaaagtgctgggGGACACTTGATTTTCTATAGCATTGTGTTACTGGATATTTCCATACAATTTAAAATgagggaggcagagagacagagagagagagcgaACCATGAGTTGGGGCTCTGGACTCTCAAGTCATGAGACAAATTGTAGATAAAACGACAAAAATCCAGAATTGACATGTTGTGGGTTTTGCTGATAAAGAACAGTTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGTATTTAAATCATTTAAACTGGTTCTGCTG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e papAnu2.chr19 47725328 1228 + 51301725 I e macFas5.chr19 55654365 32552 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=24634.000000 s hg38.chr19_GL949747v2_alt 478920 43 + 729520 TAATACTAGAAATACAAGCATGAAAAATTCTAATGGTTTATTA s panTro4.chr19 59691096 43 + 63644993 TAATACTAGAAATACAAGCATGAACAATTCTAATGGTTTATTA i panTro4.chr19 C 0 I 28023 s ponAbe2.chr19 56630372 43 + 60714840 TAATACTAGAAATACAAGCATGAAAAATTCTCATGGTTTATTA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47726556 41 + 51301725 TAGTACAAGAAACTCAAGCAGGAAA-ATTAGAATGACTT-TTT i papAnu2.chr19 I 1228 C 0 s chlSab2.chr6 47469112 43 + 50890351 TCATACTAGAAATACAAGCATGAAACATCCTAATGGTTTATTC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55654365 32552 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=37411.000000 s hg38.chr19_GL949747v2_alt 478963 51 + 729520 GTCACAATGACTCTGAAAACCTTAATAATACCTATTAGATATTTTGCATAT s panTro4.chr19 59719162 51 + 63644993 GTCACAATTACTCTGATAATGTTAATAATACCTCTTAGATATTTTGCACAT i panTro4.chr19 I 28023 C 0 s ponAbe2.chr19 56630415 51 + 60714840 GTCACAATGACTCTGAAAACCTTAATAATACCTATTAGATATTTTGCATAT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47726597 51 + 51301725 GTCACAATTATTCTGATAATGTTAATAATACTTGTCAGATATTTTGCATAT i papAnu2.chr19 C 0 I 28957 s chlSab2.chr6 47469155 51 + 50890351 GTCACAATTGCTCTGACAACTTTCATAATACCTATTAGATATTTTACATAT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55654365 32552 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=1820.000000 s hg38.chr19_GL949747v2_alt 479014 2 + 729520 TA s panTro4.chr19 59719213 2 + 63644993 TA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630466 2 + 60714840 TA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47755605 2 + 51301725 ta i papAnu2.chr19 I 28957 C 0 s chlSab2.chr6 47469206 2 + 50890351 TA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55654365 32552 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=550551.000000 s hg38.chr19_GL949747v2_alt 479016 505 + 729520 CACAGGAAGAAGAGTTTGAATCTCAGATAAAAACAATAAAAATACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGGCATCTCGTGTTCAGGAGGTTGGATCTGAGACGTGTTTTGAGT-TGGTCATAGTGAAGGACGCTAGGTGTAAATTCTAGTGAGAACAATTTCCAGGAAGCCGTGTTCCGCTCTTGAGCGAGCAACCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAACATGTAAACTGCATGGGCAGGGCGCCAAATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCACGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATAGAGGAAGGGAGTGTGGGGTTGGAGATCTGGGCCCAGAGGTGGATATATAGGCCTGGAGGTGGAGTTGTGGGCCTGGAGTGGAGATCTGGGCCTGGAG s panTro4.chr19 59719215 502 + 63644993 CACATGAAGAAGAGTTTGAATCTCAGATAAAAACAA---AAATTCATCAAAAGTCTTTAATGAAAGCACAGAATTCAATCATCTCGTGTGTGAGAGTTTGGATCTGAGACGTCTTTTGAGTCTGGTCATAGTGAAGGACGCAAGGTGTCAATTCTAGTGAGAACAATTTCCAGGAAGCCATGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAGCATGTAAACTGCATGGGCAGGGCGCCAAAAAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCACGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATCGAGGGAGGGAGTGCGGGGATGGAGATCTCGGCCTAGAGGTAAAGATCTGGGCCTGGA-GTGGAGATATGGGTCTGATGTGGAGATATGGGCCTGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630468 505 + 60714840 CACAGGAAGAAGAGTTTGAATCTCAGATAAAAACAATAAAAATACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGGCATCTCGTGTTCGGGAGGTTGGATCCGAGACGTGTTTTGAGT-TGGTCATAGTAAAGGACGCGAGGTGTCAATTCTAGTGAGAACAATTTCCAGGAAGCCATGTTCCACTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGTGTACGTCACCCTCCCATGATGTGGTCAGCATGTAAACTGCATGGGCAGGGCGCCAAATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCTGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGCGTATGTTGGTGAGTCCTGGAAAGGAATCAAGGGAGGGAGTGCGGGGATCGAGATCTGGGCCCAGAGGTGGAGATATAGGCCTGGAGGTGGACTGATGGGCCTGGAGTGGAGATCTAGGCCTGGAG i ponAbe2.chr19 C 0 T 20669 s nomLeu3.chr10 103236124 459 - 106955855 cacatgAAGAGGAGTTTGAATCTCAGATAAAAACAACAAAAATACATCAAAAGTCTTTAATGTAAGCCAAGCATTCAGTCATCTCCTGTATGAGAGACTGGATCCGAGATGTGTTTTGAGT-TGGTCATAGTGAAGGATGCAAGGCGTCAATTCTAGTCGGAACAATTTCCAGGAAGCCATGTTCCGCTCTTGACCAAACAGCCACTGGGCCTCATGCGAGGTAGAAATAG-CTGCATACGTCATCCTCCCATGATGTGGTCAGCAGGTAAAGTGCATGAGCC-----CCTCACAACATCCTGTGTGCTGCTGAACTGAGCTGGGGCGCAGCCGCCTGTCTGCACAGGCAGCACCATGTTGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATCGAGGGAGGGAGTGCTGGGGTGGAGATC----------------------------------------TGGGCCTGGAGTGGAGATCTGGGCCTGGAG i nomLeu3.chr10 N 0 C 0 s papAnu2.chr19 47755607 503 + 51301725 tacacggagaagag-ttgaaacacagataaaaacaacaaaaatacatgaaaagtctTTCTCGTCAGCACAGATTTTAGTCACCTCGTGTCCGGGAGGTTGGATCTGAGACGTGTTTTGAGC-TGGTCATAGTGAAGGACACAAGGTGTCAGTTCTAGTGAGAACAATTTCCAGGAAGCCATTTTCCACTCTTGAGTGAGCACCCGCTGCACCTCATGCAAGGTAGGAAGAGCCTGCGTACATCACCCTCCCATGATGTGGTCAGCACGTCAACTGCATGGGCAGGGCCCCAGATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAACACCATGTCGCTCATGGTCGTCAGCCTGGTGTGTGTTGGTGAGTCCTGCAAGGAAATCGGCGGAGGAAGCGCTGGggtggagatctgggcctggagg-ggagatCTGGACCTGGAGGTTGAGttatgggcctggagtggagatatgggcctgggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47469208 504 + 50890351 CACACTAAGAAGAGTTTGAAACACAGATAAAAACAACAAAAATACGTGAAAAGTCTTTCTCGTCAGCACAGATTTTAGTCACCTCGTGTCTGGGAGGTTGGATCTGAGACGTGTTTTGAGC-TGGTCATAGTGAAGGACGCAAGGTGTCAGTTCTAGTGAGAACAATTTCCAGGAAGCCATTTTCCCCTCTTGAGTGAGCACCCGCTGCACCTCATGCAAGGTAGGAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAGCACGTCAACTGCATGGGCAGGGCGCCAGATAACATCCTGTGCACTGCTGAGCTGAGCTGGGGCGCGGCCACCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCGTGGCGTGTGTTGGTGAGTCCCGGAAGGGAATCGGCGGAGGAATCGCTGGGGTGGAGATCTGAGCCTGGAGG-GGAGATCTGGACCTGGAGGTTGAGTTATGGGCCTGGAGTGGAGATCTGGGCCTGGAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55654365 32552 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=90.000000 s hg38.chr19_GL949747v2_alt 479521 1 + 729520 T s panTro4.chr19 59719717 1 + 63644993 T i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103236583 1 - 106955855 T i nomLeu3.chr10 C 0 I 37 s papAnu2.chr19 47756110 1 + 51301725 t i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47469712 1 + 50890351 G i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56630973 20669 + 60714840 T e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55654365 32552 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=7164.000000 s hg38.chr19_GL949747v2_alt 479522 17 + 729520 GGATATATGGGCCTAGA s panTro4.chr19 59719718 17 + 63644993 GGAGATATGGGCCTGGA i panTro4.chr19 C 0 T 28019 s papAnu2.chr19 47756111 17 + 51301725 ggagatctgggcctgga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47469713 17 + 50890351 GGAGATATGGTCCTGGG i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56630973 20669 + 60714840 T e calJac3.chr22 45773030 1697 + 49145316 T e nomLeu3.chr10 103236584 37 - 106955855 I e macFas5.chr19 55654365 32552 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=5827.000000 s hg38.chr19_GL949747v2_alt 479539 21 + 729520 GATGGAGTGATGGGCCTAGAA s panTro4.chr19 59691716 21 + 63644993 GATGGAGTGATGGGCCTAGAA i panTro4.chr19 T 28019 C 0 s papAnu2.chr19 47756128 19 + 51301725 -gtggagatatgggcctggg- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47469730 19 + 50890351 -GTGGAGATATGGGCTTGGA- i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56630973 20669 + 60714840 T e calJac3.chr22 45773030 1697 + 49145316 T e nomLeu3.chr10 103236584 37 - 106955855 I e macFas5.chr19 55654365 32552 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=11063.000000 s hg38.chr19_GL949747v2_alt 479560 23 + 729520 GTGGAGATCTGGGCCCAGAGGTC s panTro4.chr19 59691737 22 + 63644993 GTGGAGATCTGGGTCTGGA-GTG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103236621 23 - 106955855 GTGGAGATACGGGCCTGGAACTG i nomLeu3.chr10 I 37 C 0 s papAnu2.chr19 47756147 22 + 51301725 gtggagataTGATCCTGGA-Ggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47469749 22 + 50890351 GTGGAGATATGGGCCTAGA-GTG i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56630973 20669 + 60714840 T e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55654365 32552 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=32114.000000 s hg38.chr19_GL949747v2_alt 479583 45 + 729520 GAGATATAGGCCTGGAGGTGGAGTGATGGGACTGTAGTGGAGATC s panTro4.chr19 59691759 45 + 63644993 GAGATATGGGCCTGGAGGTAGAGATATGGGCCTGGAGTGGAGATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56610304 45 + 60714840 GAGATATAGGCCTGGAGGTGGACTGATGGGCCTGGAGTGGAGATC i ponAbe2.chr19 T 20669 I 37311 s nomLeu3.chr10 103236644 25 - 106955855 TAGATACGGGCCTGG--------------------AATGGAGATC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47756169 45 + 51301725 gagatctgggcctggaggtTGAGTTATGGGCCTGGGGTGATGata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47469771 45 + 50890351 TAGATATGGGCCTGGAACTGTAGATATGGGCCTGGAGTGAAGATA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55654365 32552 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=36422.000000 s hg38.chr19_GL949747v2_alt 479628 50 + 729520 TGGGCCTGGAGTGGAGATAGGAACCTGGAGGGGAGAT--------------------------------------AGGAACCTGGAGG s panTro4.chr19 59691804 50 + 63644993 TGGGCCTGGAGTGGAGATAGGAACCTGGAGGGGAGAT--------------------------------------AGGAGCCTGGAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647660 50 + 60714840 TGGGCCTGGAGTGGAGATAGGAACCTGGATGGGAGAT--------------------------------------AGGAGCCTGGAGT i ponAbe2.chr19 I 37311 C 0 s nomLeu3.chr10 103236669 50 - 106955855 TGGGCCTGGAGTGGAGACACGGGCCTGGAGTGGAGAT--------------------------------------ACGGGCCTGGAGT i nomLeu3.chr10 C 0 T 135 s papAnu2.chr19 47756214 88 + 51301725 tgggcctggagtggagatatgatcctggagtggagatctgggcctgggaTAGAGACATGGGCCTGGCATGGAAGGATGGGcctggaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47469816 32 + 50890351 TGAGCCTGGA------------------ACTGTAGAT--------------------------------------ATGGGCCTGGAGT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55654365 32552 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=19193.000000 s hg38.chr19_GL949747v2_alt 479678 19 + 729520 GGAGATATGGGCCTGGAGG s panTro4.chr19 59691854 19 + 63644993 GGAGACATGGGCCTGGAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647710 18 + 60714840 GGAGATATGGGCCTGGAG- i ponAbe2.chr19 C 0 T 16755 s nomLeu3.chr10 103236584 19 - 106955855 GGAGATATGGGCCTGGAAC i nomLeu3.chr10 T 135 C 0 s papAnu2.chr19 47756302 18 + 51301725 ggggatatgggcctgggg- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47469848 18 + 50890351 GGAGATATGGGCCTGGGG- i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55654365 32552 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=98931.000000 s hg38.chr19_GL949747v2_alt 479697 107 + 729520 TGGAGATATGGGCCTGGA-GTGGAGTCATGGGCCTGGAGGTGGAGTTACGGGCCTGCA-GTAGAGATATGGGCCTGAAGTGGAGACATGGGCCTGGAGTGGAGATATGG s panTro4.chr19 59691873 107 + 63644993 TGGAGATATGGGCCTGTA-GTAGAGTTATGGGCCAGGA-GTGGAGATATGGGCCTAGAGGTGGATATCtgggcctggagtggagatatgggcttggggtggaggtatgg i panTro4.chr19 C 0 T 16450 s ponAbe2.chr19 56630973 106 + 60714840 TGGAGATCTGGGCCTGGA-GTGGACATCTGGGCCTGGA-GTGGAGATCTGGGCCTGGA-GTAGAGTTACGGGCCTGCAGTAGAGATATGGGCCTGGAGCGCAGATATGG i ponAbe2.chr19 T 16755 C 0 s nomLeu3.chr10 103236603 107 - 106955855 TGTAGATATGGGCCTGGA-GTGGAGATACGGGCCTGGAACTGTAGATACGGGCCTGGA-ATGGAGATCTGGGCCTGGAGTGGAGACACGGGCCTGGAGTGGAGATACGG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47756320 106 + 51301725 tggagatctgggcctgga-gtggagatatgggcctgg-gatggagatatgggcctggg-ttggagatatgggcctgggatAGAGACATGGGCCTGGCATGGAGGGATGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47469866 108 + 50890351 TGGAGATATGGGCCTGGAGGTAGAGATATGGGCCTGGAGGTGGAGATATGGGCCTAGA-GTATAGATACGGGACTGGAGTGGAGATATGGGTCTGGAGTGGAGATCTGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55654365 32552 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=22333.000000 s hg38.chr19_GL949747v2_alt 479804 18 + 729520 GCCAGGAGTGGAGATATG s panTro4.chr19 59675530 18 + 63644993 GCCTGGAGTGGAGATATG i panTro4.chr19 T 16450 C 0 s ponAbe2.chr19 56631079 18 + 60714840 GCCAGGAGTGGAGATGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236710 18 - 106955855 GCCTGGAGTGGAGATATG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47756426 18 + 51301725 GCCTGGaatggagatatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47469974 18 + 50890351 GCCTGGGGTGGAGATATG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55654365 32552 + 59248254 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=23088.000000 s hg38.chr19_GL949747v2_alt 479822 40 + 729520 GGCCTAGAGGTCGATATCTGGGCCTGGAGTGGAGATATGG s panTro4.chr19 59675548 11 + 63644993 GGCCTGGAGGT----------------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631097 40 + 60714840 GGTCTAGAGGTGGATATCTGGGCCTGGAGTGGAGATATGG i ponAbe2.chr19 C 0 I 16630 s nomLeu3.chr10 103236728 40 - 106955855 GGCCTGGAACTGTAGATATTGGCCTGGAGTGGAGATATGG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55621813 21 + 59248254 GGCCTGGA-------------------GGTGGAGATATGA i macFas5.chr19 T 32552 C 0 s papAnu2.chr19 47756444 38 + 51301725 ggcctggag-gggagatctgggcct-gggtggagatatgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47469992 39 + 50890351 GGCCTGGAG-TGGAGATATGGGCCTGGGGTGGAGATATGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=5241.000000 s hg38.chr19_GL949747v2_alt 479862 7 + 729520 GCCAGGA s nomLeu3.chr10 103236768 7 - 106955855 GCCTGGA i nomLeu3.chr10 C 0 I 156 s macFas5.chr19 55621834 7 + 59248254 GCCTGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47756482 7 + 51301725 gcctggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47470031 7 + 50890351 GCCTGGG i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56631137 16630 + 60714840 I e calJac3.chr22 45773030 1697 + 49145316 T e rheMac3.chr19 60531863 10348 + 64156825 T e panTro4.chr19 59675559 0 + 63644993 C a score=144.000000 s hg38.chr19_GL949747v2_alt 479869 1 + 729520 G s nomLeu3.chr10 103236931 1 - 106955855 G i nomLeu3.chr10 I 156 C 0 s macFas5.chr19 55621841 1 + 59248254 G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47756489 1 + 51301725 t i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47470038 1 + 50890351 G i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56631137 16630 + 60714840 I e calJac3.chr22 45773030 1697 + 49145316 T e rheMac3.chr19 60531863 10348 + 64156825 T e panTro4.chr19 59675559 0 + 63644993 C a score=58375.000000 s hg38.chr19_GL949747v2_alt 479870 50 + 729520 TGGAGATATGGGCCTAGAGG--------------------------------------------------------------------------TCGATATCTGGGCCTGGAGAGGAGATATGT s panTro4.chr19 59675559 49 + 63644993 -GGAGATATGGGCCTAGAGG--------------------------------------------------------------------------TGGATATCTGGGCCTGGAGTGGAGATATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647767 50 + 60714840 TGGAGATATGGGCCTAGAGG--------------------------------------------------------------------------TGGATATCTGGGCCTGCAGTGGAGATATGG i ponAbe2.chr19 I 16630 T 16680 s nomLeu3.chr10 103236932 50 - 106955855 TGGAGATATGGGCCTGGAAC--------------------------------------------------------------------------TGTAGATATGGGCCTGGAGTGGAGATATGG i nomLeu3.chr10 C 0 I 59 s macFas5.chr19 55621842 50 + 59248254 TGAAGATATGAGCCTAGAAC--------------------------------------------------------------------------TGTAGATATGGGCCTGGAGTGAAGATATGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47756490 124 + 51301725 tggagatatgggcctgggatAGAGACATGGGCCTGGCATGGAGGGATGGGCCTGGAATGGAGATATGAGCCTGGAGGGGAGATCTGGGCCTgggtggagatatgggcctggggtggagatctga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47470039 50 + 50890351 TGGAGATATGGGCCTGGAAC--------------------------------------------------------------------------TGTAGATATGGGCCTGGAGTGAAGATATGA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=11959.000000 s hg38.chr19_GL949747v2_alt 479920 8 + 729520 GCCTAGGA s panTro4.chr19 59675608 8 + 63644993 GCCTAGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631137 8 + 60714840 GCCTAGGA i ponAbe2.chr19 T 16680 C 0 s nomLeu3.chr10 103237041 8 - 106955855 GCCTGGAG i nomLeu3.chr10 I 59 C 0 s macFas5.chr19 55621892 8 + 59248254 GCCTAGAA i macFas5.chr19 C 0 I 30952 s papAnu2.chr19 47756614 8 + 51301725 gcctggag i papAnu2.chr19 C 0 I 19 s chlSab2.chr6 47470089 8 + 50890351 GCCTGGAA i chlSab2.chr6 C 0 I 1 e calJac3.chr22 45773030 1697 + 49145316 T e rheMac3.chr19 60531863 10348 + 64156825 T a score=102127.000000 s hg38.chr19_GL949747v2_alt 479928 111 + 729520 TGGAGATACGGGCCTGGGTGTGGAGATATGGGACTGGA--------------------------------------GAGGATATATGGGCCTGGAGTGGAGATATGGGACTGGAG-AGGAGATATGGACCTGGAGTGGAGATAAGGGCCT s panTro4.chr19 59675616 111 + 63644993 TGGAGATATGGGCCTGGGTGTGGAGATATGGGACTGGA--------------------------------------GTGGAGATATGGGCCTGGAGTGGAGATATGGGCTTGGGG-TGGATATCTGGGCCTGGGTTGGAGATAAGGGCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631145 111 + 60714840 TGGAGATATGGGTCTGGCTGGGGAGATAtgggactgga--------------------------------------gtggagatatgggcctgaagtggagatatgggcttggag-tggagatctgggcctggggtggagatatgggcct i ponAbe2.chr19 C 0 I 16681 s nomLeu3.chr10 103237049 112 - 106955855 TGGAGATATGGGCCTGGAACTATAGATATGGGCCTGGA--------------------------------------GTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGGAGTGGAGATATGGGCCT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47756641 148 + 51301725 tAGAGATATTGGCCTGGA-GTGGAGATTTGGGCCTGGAGTAGAGATATGAACCTGgaatagagataggatcttggAGTAGAGACATGAGCGTGGAGTGGAGATACGGGCCTGCAG-TGGAGATACGGGTCTagagtggagatatgggcct i papAnu2.chr19 I 19 C 0 s chlSab2.chr6 47470098 112 + 50890351 TGTAGATATGGGCCTGGA-GTGGAGATATGGGTGTGGAG-------------------------------------GTGGAGATATGGGCCTAGAGTGTAGATATGGGCCTGGAACTGTAGATATGGGCCTGGAGTGAAGATATGAGCCT i chlSab2.chr6 I 1 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=35004.000000 s hg38.chr19_GL949747v2_alt 480039 34 + 729520 GGAT-TGGAGATATGGGCCCAGGGTGGAGATCTGA s panTro4.chr19 59675727 34 + 63644993 GGAT-TGGAGATATGGGCCTAGGGTGGAGATCTGA i panTro4.chr19 C 0 I 16219 s ponAbe2.chr19 56647937 34 + 60714840 GGAG-TGGAGATATGGGCCAAGGGTGGAGATCTGA i ponAbe2.chr19 I 16681 C 0 s nomLeu3.chr10 103237161 34 - 106955855 GGAG-TGGAGATATGGGCCTGGAGTGGAGATATGG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47756789 34 + 51301725 ggag-tggagatctgggcctgggctggagatctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47470210 35 + 50890351 GGAACTGTAGATATGGGCCTGGAGTGGAGATATGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=6430.000000 s hg38.chr19_GL949747v2_alt 480073 6 + 729520 GCCTGG s panTro4.chr19 59691980 6 + 63644993 gcctgg i panTro4.chr19 I 16219 C 0 s ponAbe2.chr19 56647971 6 + 60714840 GCCTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237195 6 - 106955855 ACCTGG i nomLeu3.chr10 C 0 T 426 s papAnu2.chr19 47756823 6 + 51301725 gcctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47470245 6 + 50890351 GTGTGG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=29022.000000 s hg38.chr19_GL949747v2_alt 480079 36 + 729520 -------------------ATTGGAGATATGGGCCTGGATTGGCGATATGGGCTT s panTro4.chr19 59691986 36 + 63644993 -------------------attggagatatgggcctagggtggaaatatcagcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647977 36 + 60714840 -------------------ATTGGAGATATGGGTCTGGATTGGAGATATGGGCCT i ponAbe2.chr19 C 0 T 16757 s nomLeu3.chr10 103236775 36 - 106955855 -------------------ACTGTAGATATGGGCCTGGAGTAGAGATATGGGCCT i nomLeu3.chr10 T 426 C 0 s papAnu2.chr19 47756829 55 + 51301725 aggggagataggagcctggagtggagatatgtTCCTGGAGTAGAGATATGGGTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47470251 37 + 50890351 AG------------------GTGGAGATATGGGCCTAGAGTGTAGATATGGGCCT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=-6958.000000 s hg38.chr19_GL949747v2_alt 480115 3 + 729520 AGG-------------------------------------- s panTro4.chr19 59692022 3 + 63644993 gga-------------------------------------- i panTro4.chr19 C 0 I 27710 s ponAbe2.chr19 56631256 3 + 60714840 agg-------------------------------------- i ponAbe2.chr19 T 16757 C 0 s nomLeu3.chr10 103236811 3 - 106955855 GGA-------------------------------------- i nomLeu3.chr10 C 0 I 1 s papAnu2.chr19 47756884 41 + 51301725 GGAGTGGAGATAGGAGCCTGTAAGGGAGATATGGGTTTGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47470288 4 + 50890351 GGA-------------------------------------A i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=49483.000000 s hg38.chr19_GL949747v2_alt 480118 49 + 729520 GTGGAAATATCGGCCTGGA-GTGGAGATATGGGCCTGGAGT-GGAGATATG s panTro4.chr19 59719735 50 + 63644993 GTGGAGATCTGGGCCAGGAAGTGTTGATCTGGGCCTGGAGT-GGAGATCTG i panTro4.chr19 I 27710 C 0 s ponAbe2.chr19 56631259 49 + 60714840 gtggaaatatcggcctgga-gtggagatatgggcctggagt-ggagatatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236815 49 - 106955855 CTGTAGATATGGGCCTGGA-GTGGAGATATGGGCCTGGAGT-GGAGATATG i nomLeu3.chr10 I 1 C 0 s papAnu2.chr19 47756925 49 + 51301725 GTGGAGATATGGACCTGGA-GTGGAGATACGGGCCTGGAGG-GGAGATATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47470292 50 + 50890351 CTGTAGATATGGGCCTGGA-GTGAAGATATGAGCCTGGAGGTGGAGATATG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=2425.000000 s hg38.chr19_GL949747v2_alt 480167 8 + 729520 GGCT-TGAG s panTro4.chr19 59719785 9 + 63644993 GGCCAGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631308 8 + 60714840 ggct-tggg i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47756974 8 + 51301725 AGCC-TGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47470342 8 + 50890351 GGCT-TGAG i chlSab2.chr6 C 0 I 11147 e calJac3.chr22 45773030 1697 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=11656.000000 s hg38.chr19_GL949747v2_alt 480175 19 + 729520 GTGGGGATATGGACCTGGA s panTro4.chr19 59719794 19 + 63644993 GTGTTGATCTGGGCCTGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631316 19 + 60714840 atggggatatggacctgga i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47756982 19 + 51301725 GTAGAGATATGGACCTGGA i papAnu2.chr19 C 0 T 12079 s chlSab2.chr6 47481497 19 + 50890351 GTGCAGATCTGGATCCGGA i chlSab2.chr6 I 11147 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=395845.000000 s hg38.chr19_GL949747v2_alt 480194 672 + 729520 GGCTGGGTCTCTGCACAGCCGACAGCCCTGTTCTTGGGTGCAGGTAGGCACTGAGGGTGAGTTTACCTTCAGCCCAGGAAGGGCCTGGCTACCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGTGC-CCTGGTTTGCCTGCAG--ATGGGTCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGAGGGTGAGTCCTTCTCCAAACCTTCGGGTGTCATCTCCCC--ACATAAGAGGATTTTCCTGAAATGGGA-------------------------------------GGGAAGTCCTGTCAGGGAGTCTCTCATAAACTAGGAAGAAGGGACCCTGGGGTGCTGGGCCCACATTTCTGACCTTGCC-TCCCTGGCCTTTCATTCCCTTGGCAGAGTCAAGTTCTGTGGGGACCAGGG---TTAGACTACGGTGCTCAAAGCTGGGGTGTGTGGTGG--GGA---------------------------------AGTGGTAGGAACAGCAGATCCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCGTTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTGGGAAAACCACAGCCATGGCCCTGACATTCCAA-TCCTCTGATGGGGACTCAGTTGTTTATTTTCGTTCAGGCATCGGCTGATATTCCATTCTCAAAGGACATGCCCTCCACCCCATGTCT s panTro4.chr19 59719813 708 + 63644993 GCCTGGGTCTCTCCACAGCCGAGAGCCCTGTTCTTGGCAGCAGGTAGGCAGGGAGGCTAAGTTTACCTTCAGCCAATCAGGGGCCTGGCTACCAAGACTCACAGCCCAGTCGGGGCAGCAAGGGAGG-CCTGGTTTGCCTGCAG--GTGGATGGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACACATGGGTGAGTCCTTCTCCAAACCTTAGGTTGTCATCTCCCC--ACATAAGAGGATTTTCCTGAAACAGGA-------------------------------------GGGAAGCCCGGTGGGGGATTTTCTTATAAACAAGGATGAGGAGACCCTGGGGTGCTCAGCCCACAGTTCCGACCTTGCCCTCCCCAGCCTTCCTTTCCCTGGGCTGAGTCAGGTTCTGTGGGAACCCGGGAGGGCAGACTGGGGTCCTCCAAGCTGTGCTGTGCGGCGG--GGATGTGGTGTCACTGGCAGAGGAAGGGAGCAAAGCAGTGCTAGGAACAGCAGG-CCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGCGTTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACC-TCAGAGGTGGGGGAACCCCAGCCATGGCCCTGACATTCCAAATCCTCTGTTGGGGGCTCAGTTGTGTATTGTGGTTCACACATTGGCTGCTATTCCATTCACAAAGGACATGCCCTCGACTCCATGTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631335 669 + 60714840 ggctgggTCTCTGCACAGCCAACAGCCGTGTTCTTCGGTGCAGGTAGGCAGTGAGGGTGAGTTTACCTTCAGCCCAGCAAGGGCCTAGCTGCCAAGACTCACAGCCCAGTGGGAGCAGCAAGGGAGG-CCTGATTTGCCTGCAG--ATGGATCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGAGGGTGAGTC---CTCCAAACCTTAGGGTGTCATCTCCCC--ACAGAACAGGATTTCCCCTAAATGGGA-------------------------------------GGGAAGTCCTGTCGGGGATTCTCTCATAAACTAGGAAGAGGGGACCCTGGGCTGCTCGGCCCACAGTTCTGACCTCGCC-TCCCTGACCTTTCATTCCCTTGGCAGAGTCAGGTTCTCTGGGGACCAGGG---TTAGACTGGGGTGCTCAAAGCTGGGGTGTGTGGTGG--GGA---------------------------------AGTGGTAGGAACAGCAGATCCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCATTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTGGG-AAACCACAGCCATGGCCGTGACATTCCAAATCCTCTGACGGGGGCTCCATTGTTTATTTTTGTTCAGGCATCCACTGATATTCCATTCACAAAGGACATGCCCTCCACCCCATGTCT i ponAbe2.chr19 C 0 I 210 s papAnu2.chr19 47744922 719 + 51301725 TTCGGGGTCTCC---CAACGGGGAGCCGTGTT--CTGGAGCAAGCGGGTGGTGAGGCTGAGTGAACGTTCAGCCCAGCGAGG-------CGCCCAATGGC---------TGGGAGGAA-AGGGCAGG-------TTG-CTGCAGACATGAATAGTTCATCATGATCTTTCTTTGCAGGGTTCTTCTTGGACCAGAGGGTGTGGGCACACGTGGGTGAGTCCTT-CCCAAATGATGGGTTGCCATCCCCACCGATACAAGTGAATTTTCCTGAGAAGGGAGGCAGGCAGCACAGAGGGTGGCTGATGGACTGACCGTGGGAAAGCCTGTGGGGAAATCTCTCGTGAACTAGGAAGAGGAGACCCTGGGATGCTCGGCCCTGAGTTCTGTCTTATCCCTCCCCAGCCGTTCTTCCCTGTGGCTGAGCCTAGCTCTGTGTGGCCCAGGG---AGAGACTTGGGCGCTCAAAGCTGGGGTGTCGGGGGATGGGATATGGTGTCACtggcagaggagggaagggaagcaaTGCTAGGAACAGCAGGTCCTCTGAGGACAAGAGGGTAAATCACTCTCTCCAGTGTTTCCATGATGGTCGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTGGGGGAACCACAGTCACGACCCTGACATTCCAATCCCTCTGATGGGG-CTCAGTTGTTCATTATGGTTCAGGCATTAGCTGATATTCCATCCACAAAGGTCGTACCCTCAGCTGCATGTCT i papAnu2.chr19 T 12079 C 0 s chlSab2.chr6 47481516 694 + 50890351 GGCTGGGTCTCTGCACAGCTGACATCCCTGCT-GCGGGGGCAGGTGGGCAGCCAGGGTGAGTTTACCTTCAGCCCAGCAAGGGCCTGGCTGCCCAGACGCACAGCCCCGTGGGGGCAGCAGGGGAGGCCCTGGTTTGCCTGCAG--ATGGATCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGGTCCAGAGGGCCTGTCCACACACGGGTGAGTCCTTCCCCAAACCTTAGGGTGTCATCTCCCC--ACCTAAGAGGATTTTCCTGAAACAGGA-------------------------------------GGGAAGTCCTGTCAGAGAGTCTCTCATAAACTAAGAAGGGGGGACCCTGGGGTGCTCGGCTCACACTTCTGACCTCGTCCTCTCTGGCCTTTCTTACCCTTGGCTGAGTCAAGCTCTGTGAAGACCGGGG---TGAGCTTGGGGTGCTCCAAGCTGAGGTGTGCAGGGA--GGAAGTGGTGTCAGTGACTGAGGAAGGGAGGGAAGCAGTGCTAGGAACAGCAGGTCCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGTGTTTCCATGACGGTCAGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTGGGGAAACCACAGCCATGACCCTGACATTCCAAATCTCATGTTGGGG--------GCTCA-----GTTCATGCACTGGCTGATATTCCATTCACAAGGGACATGCCCTCCATGCCGTGTCT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=866752.000000 s hg38.chr19_GL949747v2_alt 480866 1208 + 729520 ACCCTGTGTTGTTTTATGTGAGTAATCTTACAGTATTAAAATCTAGTAGGAGTCTCTTACTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTGTTGTAGGGAGACACCTTGTGTTTGCGGGATGGGTTCTTCCTTTAGCCCTGGGCACCAAGGTGTGATAGCAGCCATAGAAACTTGGAAAGCGAGGAGAATCTTCAGAGCACAGGGAGGGAGGGGCGGCTCCACATCCTCCTCTCTAAGGCGGTGCCTCCTTCTCCCCACGGTGGTCAGGACAAGCCCTTGCTGTCTGCCTGGCCAAGCCCTGTGGTGCCTCCAGGA---TATGTGATTCTTCAGTGTCATTCTTATCTTGGGTTTAA---------CAACTTCAGTCTGTAAAAGGAAGATGGGGTGCCTGTCCCTGAGCTCTACAACATAATATTCTGGAACAGCCTTTTCATGGGCCCTGTGACCCCAGCACACGCAGGGACCTATACATGTCGGGGTTCACAACCACACTACCCCAGTGGGTGGTCGGCACCCAGCAACCCCCTGGAGATCACGGTCACAGGTCAGAGGGCTCCTGTCTGGGATTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTCCTGGTGGGCGTGTCCTTGCGGGTCCCATCATGCAAGTCCTGACTGTATTTGGGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCtgtggtgggaagaataattgtccccagtgatgactacattctaatccctggagtctgtgactatttatgatataggggaagggactgaaggagaagatggagctcaggttgttgatgagttgaccttgagatggggagacaacctggactgtcctgatgggctcagtgtagtcacaggggtccacag-gaaaggaggaggaagaggggagtggggattacagcagcataatgggagtctccatca----------gctttgaaggtggaggaagtccaggagccatgaatgcaggtggcctatagaggctggaaaagtcaag-gaactgattctc--ctgagtctccagagggaacgaagccctgcaggtaccttgatttta-cccacgacaaacagggtccgatttctg-tctccagaattggaaggggttagtgtgctctctcctgctgccatgcttctgataattttctacagcagcaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGTTAAGAaacaacacaag s panTro4.chr19 59720521 1208 + 63644993 ATT-TGTGTTGTTTTACGTGAGTAATCTTGCACTATTAAAATCTAGTAAGAGTCGCTTATTCAGCACCTGCTCAAAGTTCTCAGCTGACACTTTTGTTGCAGGGAGACGCCATGTCTATGCGGGATGGGTCCTTCCTGTAGCCCTGGGCACCCAGGTGTGGTAGGAGCCTTAGAAAGT-GGAAAT--AGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCGGCTCCACATCTTCCTGTCTAAGGCGGCGCCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCGCTGTGGTGTCTGAAGGAGAATATGTGACTCTTCAGTGTCGCTCTCGTCTTGGGTTTAA---------CGAATTCAGTCTGTCCAAAGAAGACGGGATGCCTGTCCCTGAGCTCTACAACAGAGTATTCCGGAACAGCCTTTTCATGGGCCCTGTGACCCCAGCACATGCAGGGACCTACAGATGTCGGGGTTCACACCCACACTTCCTCACTGGGTGGTCGGCACCCAGCAACCCCCTGGTGATCATGGTCACAGGTAAGAGGGCTCCTGTCTGGGATTTTCCTTGTCCCACCTCCTGAGTCCCAGAGCTTCTGGTGGGGGTGTCCACCAGCGTCCCATCATCCAGACCCTAACTGTATTTGGGGTAAAGGGGGATTGAATGCAGGGAAATGGCTGCtgtggtgggaagaataattgtccccagtgatgactacattctaatccctggagtctgtgactatttatgttataagggaagggacagaaggggaagatggagctcaggttgttgattagttgaccttgagatggggagatggcctcgactgtcctgctgggctcagtgtaatcacaagtgtccacat-gaaaggaggaggaagaggggagtggggattagagtagcgtaatgggagactccatca----------gctttgaaggtggaggaaggccatgagccatgaatgcaggtggcctatagaggctggaaaagtcaag-gaactgattctc--ctgagtctccagagggaacacagccctgcagatgccttgattttagcccaggaaaaacagggtccgatttctg-tctccagaattggaaggggtcagtgtgctctctcctgctgccatgcttctgataattttctacagcagcaacaggaaaccaacacTGGAACCCACGTCAAGGACAAGTTAAGAAAGGACACAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56632214 1210 + 60714840 ACCTTGTGTTGTTGTATGTGAGTAATCTTACAGTATTAAAATCTAGTAGGAGTCTCTTACTCAGCACCTGCTCAAAGTTCTCAGCTGATACTTTTGTTGTAGGGAGACACCATGTCTTTGCGGGATGGGTCCTTCCTTTAGCCCTGGCCACCAAGGTGTGATAACAGCCATAGAAACGTGGAAAGTGAGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCAGCTCCACATCCTCCTCTCTAAGGCGGCACCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCTGCCTGGCCCAGCCTTCTGGTGCCTCCAGGA---CATGTGATTCTTCGGTGTCATTCTTATCTTAGGTTTAA---------CAACTTCAGTCTGTACAAGGAAGATGGGGTGCCTGTCCCTGAGCTCTACAACAGAATATTCTGGAACAGCCTTTTCATGGGCTCTGTGACCCCAGCACATGCAGGGACCTATAGACGCTGGTGTTCACACCCACACTCCCCCAGTGGGTGGTCAGCATCCAGCAACCCCCTGGTCATCATGGTCACAGTTCACAGGGCTCCTGTCTGGCATTCTCTTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGCGTGTCCTTGAGGGTCCCATCACCCAGGCCCTGACTGTATTTGGGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCtgtggtgggaagaataattgtccccaatgatgactacattctaatccctggagtctgtgactatttatgttataggggaagggactgaaggggaagatagagctcaggttgttgatgagttgaccttgagatggggagacagcttggaatgtcccggtgggctcagtgtaatcacaagggtctacaacgaaaggaggaggaagaggggagtggggattagagcagcgtaatgagagtctccctca----------gctttggaggtggaggaaggccgtgagccacgaatgcaggtggcctatagaggctggaaaagtcaag-gaactgattctc--ctgagtctccagagggaatgaagccctgcaggtgccttgatttcactccaggaaaaacagggtccgatttctc-tctctagaattggaaggagtcaatgtgctctcttctgctgccattcttctgataattttctagagcagcaacaggaaaccaacacTGGAACCCAGATCAAGGACAAGTTAAGAaaggacacaag i ponAbe2.chr19 I 210 C 0 s papAnu2.chr19 47745641 1225 + 51301725 ACTTTGTGTTGTTTGGTGTAACCAATCTTGCAGTATTAAAATCTAGTAAGGGTTCCGTACTCAGCACCTGCTCAGAGTTTTCAGCCCATACTTTTGTTGTAGGGAGACGCCATGTCTATGTGGGATGGGTTCTTCCTGTAGCCCTGGACACCCAGGTGTGGTAGGAGTCTTAGAAAGATGGAAAG-GGGAAGAATCTTCTAAGCACATGGAGGGAGGGGCGACTCCACATCCTCCTCTCTAAGGCGGCACCTCCTTCTCCCCCAGGTGGTCAGGACAAACCCTTCTGCTCTGCCTGGCCCAGCGCTGTGGTGCCTCAGGGAGGACACGTGACTCTTTGGTGTCACTATCGTCCTGGGTTTAA---------CATCTTCACGCTGTACAAGGAAGATGGGGTGCCTGTCCCTGAGCTCTACAAAAGAATATTCTGGAACAGTTTCCTCATTAGCCCTGTGACTGCAGCACATGCAGGGACCTACAGATGTCGAGTTTTTCATCCGCACTCCCCCACTGAGTGGTCGGCACCCAGCAACCCCCTGGCGATCATGGTCACAGGTCAGAGGGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGGGTGTCCACCAGGGTCCCATCATCCAGGCCCTGACTGTATTTGGGGTAAAGGGGGATTGAATACATGGAAATGGGTGCTGTGGTGGGAAGAATAACTGTCCCCACTGATGGCCACATTGTAATCCGTGGACCCTGTGACTCTTTATGTTATAGGGCGGGGGACTGAAGGGGAAGATGGAGCTCAGGTTCTTGATGAGTtgaccttgagatggggagatggcCTGGACTGTCCCGCTGGGCTCAGTGGAATCACAAGGGTCCTCAt-gacaggaggaggaagaggggagtgGGGATTACAGCAGCATCATGGGAGACTCCATCAGCCACTGTgggctttgaaggtggaggaaggtcACGAGTCACAAAGGCAGGAGGCCTATAGGGGCTGGAGAAGTCAAGGGAACTGATTCTCCCCTGAGTCTCCAGAGGGAACACAGCCCTGTAGAtgccttgattttagctcagGAAGAACTGGATCCAATTTCTGTTCTCCAGAAGTGGAAGGGGTCAGTGtgttctctcctgctgccatgtttGTGATGATTTtctacagcagcaacaggaaaccaacacaggaacCCAGGTCAAGGACaagtttaaaaaccaaacaag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47482210 1221 + 50890351 ACTTTGTGTTGTTTTATGTGAGTCATCTTGAAGTGTTAAAATCTAGTAAGAGTCCCTTATTCAGCACTTGTTCAAAGCTCTCAGCTGACACCTTTGTTGTAGGGAGACGCCATGTCTATGTGGGATGGGTTCTTCCTGTAGCCCTGGACACCCAGGTGTGGTAGGAGCCTTAGAAACATGGAAAG-GGGAAGAATCTTCTGAGCACAGGGAGGGAGGGGTGGCTCCACATCCTCCTCTCTAAGGCGGCACCTCCTTCTCCCCCAGGTGGTCAGGACAAGACCTTCCTGTCTGCCCGGCCCAGCGATCTGGTGCCTCAGGGAGGACACGTGACTCTTCGGTGTCACTATCGTCGTGGGTTTAACAACTTTACCAACTTCACTCTGTACAAAGATGACAGAAGCCACGTTCCCATCTTCCACAGCAGAATATTCCAGCAGAGCTTCCTCATGGGCCCTGTGACCCCGGCACACGCAGGGACCTACAGATGTCGGGGTTCACACCCGCACTCCCCCACTGAGTGGTCGGCACACAGTGATCCCCTGGTGATCAGGGTCACAGGTCAGCGGGCTCCTGTCTGGGCTTCTCCTTGTCCCAACTCCTGAATCCCAGAGCTTCTGCTGGGGGTGTCCGTCAGGGTCCCATCACCCAGGACCTGACTGTCTTTGGGGTAAAGGGGGATTTAATACAGGGAAATGGGTGCtgtgattagaagaataactgtccccaat-atggttacattctaatccctggagcctgtgactctttatgctatagggcaggggactgaaggggaagagggagctcaggttgttgatgagttgaccttgagatggggagacggcctggactgtcccactgggctcagtggaatcacaaggcaccaaac-ga---gaggaggatgacaagagtggggattagagcagcgtcgtgggagagtccatcagccactgtgggctttgaaggtggaggaa-gccacgagccacaatgaaaggtggcctctacgggctggagaagtcaagagaattg---ctccgctgagtctccagagggaacacagttctgtagacgccttgattttagcccagggagaactggatccaatttctg-cctctaaaagtggaaggggtcactgtattctctcctggcaccatgtttctgataattttctgccacagcaacaggaaaccaagacaGGAACAT-GGTCAAGGACAAGTtaagaaaccaaac--- i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=14904.000000 s hg38.chr19_GL949747v2_alt 482074 34 + 729520 gatagccaggcatggtggcaggtgcatgtaatcc s panTro4.chr19 59721729 34 + 63644993 GAtagccaggcatggtggcaggtgcatgtaatcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56633424 34 + 60714840 gatagctgggcatggtggcaggcccatgtaatcc i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47483431 34 + 50890351 gatagccgggcatggtggtgggcacgagtaaacc i chlSab2.chr6 C 0 I 13 e calJac3.chr22 45773030 1697 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e papAnu2.chr19 47746866 0 + 51301725 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=6930.000000 s hg38.chr19_GL949747v2_alt 482108 28 + 729520 tagcgacttgggaggctgagggcaggag s panTro4.chr19 59721763 28 + 63644993 tagcgacttgggaggctgagggcaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56633458 28 + 60714840 tagtggctccggaggctgagggcaggag i ponAbe2.chr19 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e chlSab2.chr6 47483465 13 + 50890351 I e papAnu2.chr19 47746866 0 + 51301725 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=57848.000000 s hg38.chr19_GL949747v2_alt 482136 127 + 729520 aatcacttgaacccaggagacagaggttgcagtaagcctagaccacaccacttcactccagcctgggcaaaggagtgagactctgtcgccaaaaTTAATTAATT--------AATTAAAGAAACCAAACAAGGAG s panTro4.chr19 59721791 127 + 63644993 aatcacttgaacccaggaggcagacgttgcagtgagcctagaccacaccacttcactccagcctgggcgaaggagtgagactctgtctctaaaaTTAATTAATT--------AATTAAAGAAACCAAACAAGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56633486 127 + 60714840 aaatgcttgaacccaggagacagaggttgcagggagccaagaccacaccaattcactccagcctgggcaaaggaatgagactctgtctccaaaaTTAATTAATT--------AATTAAagaaaccaaacaagggg i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47483478 135 + 50890351 aatcgcttgaatccgggaggcagaaattgcagtgagccaagaccacaccactatactccagcctgggtgaaaaagtgacactctgtctcaaaaaTCaattaattaatcaatgaattaaagaaaccaaacaaggag i chlSab2.chr6 I 13 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e papAnu2.chr19 47746866 0 + 51301725 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=53495.000000 s hg38.chr19_GL949747v2_alt 482263 76 + 729520 AAGGTTGGCTACACTGAGATCAGCAAGGCTCGGATGATGATGCCACCACCAGGCTCCATCCACATAGGGAGCGGTT s panTro4.chr19 59721918 76 + 63644993 AAGGTTGGCTACACCGAGATCAGCAAGGGTGGGATTATGATGCCACCACCAGGCTCCATCCACATAGGGAGGGGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56633613 76 + 60714840 aaggttggctaccctgagatcagcaagggtgggatgatgatgccaccaccaggctccatccacagagggaggggtt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47746866 76 + 51301725 agGGTTGGCTACCCCGAGATCAGCAACGGTGCACTGCTGATGCCACCACCAGGCTGGAGCCACATAGGGAGGGAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47483613 76 + 50890351 aaggttggcaaccccgagatcaggaagggctagacgttgatgccaccaccaggctccatccacatagggaggggtc i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=37753.000000 s hg38.chr19_GL949747v2_alt 482339 83 + 729520 GATACTCCTCCAACCAGCACCAGGAGCCAGGCTATGGAAGCT--------------GGCACTGGCATGGCAAGAGTGTCTCCCAGTCCCTACCAGGA s panTro4.chr19 59721994 83 + 63644993 GATACTCCTCCAACCAGCACCAGTAGCCAGCCTATGGAAGCT--------------GGCACAGGCATGGCAACAGTGGCTCCCAGTCCCCACCAGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56633689 97 + 60714840 gatgctcctccaaccagcaccaggagccagcctatggaagctggcaccatggagAAGGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCCACCAGGA i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47483689 97 + 50890351 gatgctcctagaaccagcaccaggagccaccctgtggaagctgaggccatggagAAGGCACAGGCATGGCAGGAGAGGCTCCCAATCCCCACCAGGA i chlSab2.chr6 C 0 T 13254 e calJac3.chr22 45773030 1697 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e papAnu2.chr19 47746942 0 + 51301725 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=160752.000000 s hg38.chr19_GL949747v2_alt 482422 348 + 729520 ACAGGGTGTGTGGCCACTGGTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATTCGTCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGATGTGCAGCCTATCCTGGTTCCTCTTCCACCCCCACACAGACAGCAGGAAAGACATTAGTTCGAAATAGATACAACAGCCCAAGAGATGAGGCTGAGCCCAGCGGCAAGGGAATCAGAGGCTACTagagacagagggacagagaagagtgagggagacagaTGGAAGGACCTGCACCAGGAGTTATGGGCACAGAAAAGAACATGAAGACACAGAGAGGAAGGAGAGAGATAAGACACCAGGA s panTro4.chr19 59722077 348 + 63644993 ACAGGGTGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATTCGTCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGACATGCAGCCTATCCTGGTTCCTCTTCCACCCCCACATCGACAGCAGGAAAGACATTAGAGTGAAATAGGTACAACAGCCCAAGAGATGAGGCTGAGTCCAGCAGCAAGGGAATCAGAGGCTACTAGAGACAGAGGGACAGAGAAGAGGTAGGGAGACAGATGGAAGGACCTGCACCAGGAGTTATGGGCACAGAAAAGAACATGAAGACACAGAGAGGAAGGAGAGAGATAAGACACCAGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56633786 345 + 60714840 ACAGGGTGTGTGGACAGTGCTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATGCATCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGACGTGCCGCCTATCCTGGTTCGTCTTCCACCCCTACATAGACAGCAGGAAAGACATTAGTGTGAAATAGATACAACAGGCCAAGAGATGAGGCTGAGCCCAGTGGGAAGGGAATC--AGGCTACTAGAGACAGAGGGACAGAGAAGAGGGAGGAAGACGGATGGAAGGACCTGCACCAGGAGATATGGGCACAGAAAAGAACATGAAGACACAGAGAGGAAGGAGAGAGAC-AGACACCAGTG i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47470532 336 + 50890351 ACAGGGAGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAGGGACTCCAGTTTGTCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGACATGCAGCCTGCTGTGGTTCCTCTTCCACCCCCACACAGACAGCAGGAAAGAGATTAGTGGGAAACAGATACAACAGCCTAAGAGATGAGGCTGAGCCCAGTGGGAAGGGCGTCCGAGGCTACTAGAGACAGATGGACAGGGAAGAGGGAGGGACACAGATGAAGGGACCTGCACCAGGGGAT-----------AAAAAACagggagacacagagagggaggagagagac-agacagCTGGG i chlSab2.chr6 T 13254 C 0 e calJac3.chr22 45773030 1697 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e papAnu2.chr19 47746942 0 + 51301725 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=34958.000000 s hg38.chr19_GL949747v2_alt 482770 64 + 729520 AGGGGAAGCCTGACTCAATCCAGGTGCCATGGATGGGATGATAAAGAGAGACACCTTCTAAACT s panTro4.chr19 59722425 64 + 63644993 AGGGGAAGCCTCACTCATTCCAGGTGCCATGGATGGGATGATAAAGAGAGACACCTTCTAAATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634131 64 + 60714840 AGGGGAAGCCTCACTCATTCCAGTTGCCATGGATGGGATGATAAAGAGAGATGCCTTCTAAACT i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47470868 64 + 50890351 AGGGGAAGCCTCACTCCTTCCAGGCGCCATGGATATGATGACAAAGGGAGACGCCTTCTAAACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771333 60 + 49145316 AGGGAGAGCTTCACCC---TGAGGTCCCAGGTGAGGGGTGAGGAAG-GAGACCCCTGTGAATTC i calJac3.chr22 T 1697 C 0 e nomLeu3.chr10 103236864 0 - 106955855 C e papAnu2.chr19 47746942 0 + 51301725 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=94173.000000 s hg38.chr19_GL949747v2_alt 482834 140 + 729520 CACAACCTCTC----TTCCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCGCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAGATGTCATGTTTGAACACTTCCTTCTGCACAGAGAGGGG s panTro4.chr19 59722489 140 + 63644993 CACAAACTGTC----TTCCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCGCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAGATGTCATGTTTGAGCACTTCCTTCTGCACAGAAAGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634195 140 + 60714840 CCCAACCTCTC----TTCCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAGATGTGGTGTTTGAGCACTTCCTTCTGCACAGAGAGGGG i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47470932 140 + 50890351 CACAACCTCTC----TTTCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGGAGAGACGGTCACCCTACAATGTTGGTCAGATATCGTGTTTGAGCACTTCTTTCTGCACAGTGAGGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771393 140 + 49145316 CTCTGTCTTTG----CTCCCAGGTGCATTCACAAAACCTTCCATCTCAGCCCACCCAAGCTCCCTGGTGGCTGCGGGAGTTAGGGTGACCGTGAGCTGTCACTCGGAGCTGGCATTTGATGAGTTTATCTTATACAAAGATGGG i calJac3.chr22 C 0 I 55 s canFam3.chr1 19892854 139 - 122678785 CACAGCCCCTCCCCTCTCCTAGGGATGCACAGCAAACCCAGCCTCTCAGTTCTGCCCAGCCCTATCGTGCCCTCAGGAGGGAACGTGACCCTCCAGTGTGGTTCATGGAGAGGATTTAACAGGTTTATTCTG----ATGAGGG- i canFam3.chr1 N 0 C 0 e nomLeu3.chr10 103236864 0 - 106955855 C e papAnu2.chr19 47746942 0 + 51301725 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=14134.000000 s hg38.chr19_GL949747v2_alt 482974 49 + 729520 ATGTTTAACGACACTTTGCGCCTCATTGGA---------------GAACACCATGATGGGGTCT s panTro4.chr19 59722629 49 + 63644993 ATGTTTAACGACACTTTGAGCCTCACTGGA---------------GAGCACCATGATGGGGTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634335 49 + 60714840 GAGTTTAACGACACTTTGCGCCTCATTGGA---------------GAGCTCCATGATGGGGTCT i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47471072 49 + 50890351 ACCTTTGAGAAGCTCTTGCACCGCGTTGGA---------------GAGTTCCATGGTGGGGGTT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19892993 57 - 122678785 AAGTAGAAGGCCA------GCCCTCCTGGACCCGGGACTCCCAGCGAGCCCC-CAGTGGAGAGT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45771533 55 + 49145316 I e nomLeu3.chr10 103236864 0 - 106955855 C e papAnu2.chr19 47746942 0 + 51301725 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=118654.000000 s hg38.chr19_GL949747v2_alt 483023 151 + 729520 CCAAGGCCAACTTCTCCATCAGTCGCATGAAGCAAGACCTGGCAGGGACCTACAGATGCTACGGTTCTGTTACTCACTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCATAGGTGAGAGTGTCCAGACTTTCTT s panTro4.chr19 59722678 151 + 63644993 CCAAGGCCAACTTCTCCATCGGTCCCATGATGGAAGACCTGGCAGGGACCTACAGATGCTACGGTTCTGTTCCTCACTCCCCCTATCAGTTGTCGGCTCCCAGTGACCCTCTGGACATCGTGATCACAGGTGAGAGTGTCCAGACATTCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634384 151 + 60714840 CCAAGGTCAACTTCTCCATCGGTCCCATGATGCCTACCCTTGCAGGGACCTACAGATGCTACGGTTCTCTTTCTCACTCCCCCTATGAGTGGTCAGCTCCCAGTGACCCTCTGGACATCATGATGACAGGTGAGAGTGTCCAGACATTCTT i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47471121 151 + 50890351 CCCAGGCCAACTATTCCATCCGTCCCACGACGTCTGGCCTTACAGGGACCTACAGATGCTACGGTTCTGTCACTCACTCCCCCTATGTGTTGTCAGCTCCCAGTGACCCCCTGGACATCGTGATCACAGGTGAGAGTGTCCGGACATTCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771588 151 + 49145316 TCAAGGCTGTCTTTTGCCTGGGTCCTGTCACGCCGGCCCAGGCAGGAGCCTACAGATGCTGTGGTTCTTTCAGTCACTCCCGCTATGAGTGCTCGGCTCCCAGCGACCCCCTGGAGATTGTGATCACAGGTGAGTGTGGCTGGACCATCCT i calJac3.chr22 I 55 I 621 s canFam3.chr1 19893050 150 - 122678785 TCCAGGCCCTGTTCCCTGTGGGCCCCGTGATCCCCAGCCTCATGTGGACGTTCAGATGCCATGGTTTTTACAGCAACACCCCCCAGGTGTGGTCACTCCCCAGTGACCCTCTGGAGCTGCTGGTCTCAGGTGAGAAAGTCTGATTTTTGC- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103236864 0 - 106955855 C e papAnu2.chr19 47746942 0 + 51301725 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=4206.000000 s hg38.chr19_GL949747v2_alt 483174 5 + 729520 CTCAT s panTro4.chr19 59722829 5 + 63644993 CTCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634535 5 + 60714840 CTTAT i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47471272 5 + 50890351 CTCAT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19893200 5 - 122678785 CTCAT i canFam3.chr1 C 0 I 45 e calJac3.chr22 45771739 621 + 49145316 I e nomLeu3.chr10 103236864 0 - 106955855 C e papAnu2.chr19 47746942 0 + 51301725 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=581105.000000 s hg38.chr19_GL949747v2_alt 483179 1316 + 729520 TGTCATTGGGATGCAGAGTGAA-TGATCCAGGACTTGGAGGCCCAGGTG-GCTGTAAGGAAGATGAGCTTGGTATTCTTATGGAGAGAGACTGACTTGGTGAGGTCTGTGCCAACAGAGACAGAGAAACAGGAGACACAAGTAGAGACCAGGTGTCATAACAGAGAACAGACACAGGGGCCATACCGGGAGTTTGAAAAGACAGAAAGAGTTAAAGGAAACACACAG--ACAGACATGTCCCAGAGAGAGGTGTCCCTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGGCACCTACAGATGCCATGTTTATTCTGACACCTCTGCCTTCCATGTAATGGAGAGTAATCGTCCCAGGATATCATGGCCCCACAACACCAACCCCTGTATGCTGTGTGAACTTGTAGTCTCCAGACTGGATTCTGAGGCTCATATTCCAAATAAGCCCACTTATGAGAGGATCAGTGAGAGGCACAGAGAGAAATCAGGGACACCAAAAAGCAAAGACATAAACACACAGAGAATGAGCCAGAGGAAGGAGATTGAGAGACTCACAGACACATAAAGAGA----AAAGAGGGCAGAGAAGTG---AGAATGATGGAAGGGAGCAGAGAAAAGCACTAAAATTAGACTCCTGAGGGAGAGGCACAAGGACATTGAAAGATGGAGATGTGgggatgaattgcagagattccaaagagaactagagagaccgagaggcagagcaagacag------------------atgatag----atggatagatatagatagatgataaataggtagatgatagata----ataggttatagatacatagatgatgattgattgattc----attaatagatgagacatagagatgatgatgatgaagacagatagatagataatacatagagatacagaggcagaca--tagagaaatcatagagagagagagatgatacatagatatagataatagatgattgatggatagat--------agacaattgat----ggataaatagatgatatatagatatagatgacaggtagagaatttgtagataggcaccgaatagataaatagatagatcgatagataatagatagaaatatgcagaaagttatgaacAGGACACAAAGTGAGAAACTCAGAATT--AAAAAAAGTAACATCAAGTCAACCAATCCAAGGAGAGTCAGAGAGAATAAAACAATCCAAAAAGAGAAAACA----TATCTAGAGGTGGGGAAGTGAGGTCA s panTro4.chr19 59722834 1311 + 63644993 TGTCATTGGGATGCAGAGTGAAATGATCCACGACTTGGAGGCCCAGGTG-GTTGTAAGGAAGATGAGCTTGGTATTCTTATGGAGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGA-----------TACCGAGAGTTAGAAAAGAAAGAAAGAGTTAAAGGAGACAGACAG--ACAGACATGTCCCAGAGAGAGGTGTCCGTCCATGCTGACTTTGCTCACAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAAAACCCAAGGACACCCATATTTCTGACCTGAGTTGTGTCCTGTGGCCTCAGGCTTTCTGGCACCTACAGATGCCGTGTTTATTCTGACACCTCTGCCTTCCATGAAATGGAGAGTAATCGTCCCAGGATATCATGGCCCCAGAACGCCAACCCCTGTATGCTGTGTGAACTTGCAGTCCCCAGACTAGATTCTGAGGCTCACATTCCAAATAACCCCACATATGATAGGATCACTGAGAGACACAGAGAGAAATCAGGGACACCAAAAAGCAAAGACATaaacacacagagaaagagccagaggaaggagattgagagactcacagacacataaagagagagaaaagagggcagagaaatggagacaatgatggaagagagcagagaaaagcactaaaattagagtcttgagggagaggcacaaggacatagaaagatagagatatggggatgaattgcagagattccaaagagaactagagagaccgagaggcagagcgagacag------------------atgatag----atggatagatacagatagatgataaataggtagatgataaata----atagcttatagatacatagatgatgattgattgattc----attaatagatgatacatagacatcatgaagatgaagatagatatatagataatacatagagatagagaggcagaaaaagagagaaatcatagagagagacagatgatacatagatatagataatagatgattgatggatagat--------agacgattgat--------aaatagatgatatatagatatagatggcaggtagagaatttgtagttagacactgaatagataaatagatagatcaatagataatagatagaaatatgcagaaagttatgaacaggacacaaagtgagaaactcagaatt--ttaaaaagtaacatcaagtcaaccaatccaaggagagtcagagagaataaaacaatccaaaaaggaaaaaca----TATCTAGAGGTGGGGAAGTGAGGTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634540 1322 + 60714840 TGTCATTGGGATGCAGAGTGAA-TGATCCAGAACTTGGAGGCCCAGGTG-GTTGTAAGGAAGATGAGCTTGGTATTCTTATGGGGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGATAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACCGAGAGCTAGAAAAGACACAAGGAGTTAAAGGAGACAGATAG--ACAGACATGTCCCAGAGAGAGGTGACCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGATTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGGCACCTACAGATGCCAAGTTTATTCTGACACCTCTGCCTTCCATGCAATGGAGAGTAATCGTCCCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGGGGTCCCCACACTAGATTCTGAGGCTCACATTCCAAATAACCCCACATATGAGAGGATCACTGAGAGACACAGAGAGAAATCAGGGACACCAAAAAGCAAAGACATAAACACACAGAGAATGAGCCAGAGGAAGGAGATTGAGAAACTCACAGACACATAAAGAGAGAGAAAAGAGGGCAGAGAAGTGGAGAGAATGATGGAAGGGAGCAGAGAAAAGCACGAAAATTAGAGTCCTGAGGGAGAGGCACAAGGACATAGAAAGATGGAGATGTGGGGATGAATTGCAGAGATTCcaaagagaactagaaagaccgagaggcagagcaagacag------------------atgatag----atggatagatatagatagatgataaataggtagatgatagata----ataggttatagatacatagaagatgattgattgattcattgattaatagatgatacatagagatgatgatgatgaagatag----atagataatacatagagatagagaggcagacaaagagagaaatcatagagagagagagatgatacatagatatagataatagatgattgatggctagat--------agacaattggt----agataaatagatgatatatagatatagatgacaggtagagaatttgtagataggcaccgaatagataaatagatagatcgatagagaatagatagaaatatgcag-aagttatg-acaggacac-aagtgag-aactcagaatt---taaaaagt-acattaagtc-accaacccaaggagggtcagagagaataaaacaATCCAAAAAGGGAAAACATATCTATCTAGAGTTGGGGAAGTGAGGTCA i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47471277 1324 + 50890351 TGTCACTGGGACACAGAGTGAA-TGATCCAGGACTTGGAAGCCCCGGGGTGTCATGAGGAAGATGAGTGTGGGATTCTTATGGAGAGAGACTGACTTGGCGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGCACAGACCAGGGGTCATAACAGAGGACAGACACAGGAGCCATACATGGAGGTAGAAAAGAGAGAAAGAGTTAAAGGGGACACTCAGACACAGACATGTCCCAGAGAGAGTGGTCCTTCGGTGCTGACATTGCTCAGATACCTGGCACAGGTTAGAAGCTTCATTTCTCTTTTACCTCCACAAAGGGTT-TCTACCAAGAGAACCCAAGGACACCCATATTTCTGTCCTGAGTCAGCCCCTGTGGCCTCAGACCTTGTGGCACCTACAGATGCCGTGTTTGTTCTGACACCTCTGCCTTCCATGCAGTGGAGAGTCATTGTCCCAGGATATCGTGGCCCCAGAACACCAACCCCTGTATGCTGTGTGTACTTGGGGTCCCCACACTGGATTCTGAGGCTCATATTCCACATAACCCCACATATGATAGGATTCCTGAGAGACACAGAGAGAAATCAGGAACATCAGAAAGCAAAGACATAAACACACAGAGAATGAGCCAGAGGAAGGAGATTGAGAGACTCACAGACACATAAAGAGACAGAAAAGAGGGCAGAGGATTGGAGAGAATGATGGAAGGGAGCAGAGAAAAGCTCCAAAATCAGAACCCTGAGGGAGGGGCACAAAGACAGAGATAGATAAAGATGTGGGGATGGATTGCAGAGATTCCAAATAGAACTAGAAAAACTGAGAGGCAGAGAAAGACAAGGAAatggagagagacatatgatagatgaatggatagatgtagatagatgataaataggtagatgatagataatggatgggttatagatacatagatgatgattgatagatat----------------------------------------atagatacgtagatgatacatagagacagagaggcagacagatagaga------gggaacagacagatgatacacagatatagataatagatagatggtggatagatagagagacagaaaattgatacagagatagatacatgcaacatagataCAGATTACagatagataattgatagattgataggtagtagatagatagatcgatcgatagataatagatagaAATGTGCAGAAGGTTATGAAGAAGACAGAAAGTTAGAAACTCAGAATTAAAGAAAAAGGAAGATCAAGTC-AACAATCCAAGGAGGATCAGAGAGAAGAAAACAATACAAAAAGCGAAAACA----CACCTCGGGCTGGGGAAGTGAGGTCA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19893205 45 - 122678785 I e calJac3.chr22 45771739 621 + 49145316 I e nomLeu3.chr10 103236864 0 - 106955855 C e papAnu2.chr19 47746942 0 + 51301725 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=19891.000000 s hg38.chr19_GL949747v2_alt 484495 38 + 729520 GAGACCTAAagagacagagaaggtggaaggaggaaata s panTro4.chr19 59724145 38 + 63644993 GACACCTagagagacagagaaggtggaaggaggaaata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56635862 38 + 60714840 GAGACCTAGAGAGACAGAGAAGGTAGAAGGAGGAAGTA i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47472601 38 + 50890351 GAGACCTagagagacagagaaagtggaaggaggaaaca i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19893250 30 - 122678785 GAGACCTTCAGACATA---ACAGTGGGGTGAGG----- i canFam3.chr1 I 45 C 0 e calJac3.chr22 45771739 621 + 49145316 I e nomLeu3.chr10 103236864 0 - 106955855 C e papAnu2.chr19 47746942 0 + 51301725 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=78733.000000 s hg38.chr19_GL949747v2_alt 484533 122 + 729520 --gacatgaagagcgatggggtagagggtgagagagagagagagagagCATTAGGTCATAGAGCAGGGGAGTGAGTTCTCAGCTCAGGTG--AAGGGAGCTGTGACAAGGAAGATCCTCCCTGAGG-------------- s panTro4.chr19 59724183 119 + 63644993 --gacatgaagagagatggg-tggagggtgagagagagagagag----CATTAGGCCATAGAGCAGGGGACTGAGTTCTCAGCTCAGGTGGGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG-------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56635900 114 + 60714840 --GACATGAAGAGAGATGGGGTGGAGGGTGAGAGAGAGAG--------CATTAGGTCATAGAGCAGGGGAGTGAGTTCTCAGCTCAGGTG--AAGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG-------------- i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47746942 113 + 51301725 --GACAGGGAGAGTcg-ggggtggagggtgagagagag----------cattaggTCATAGAGCAGGGGAGTGAGTTCTCAGCTCAGGTGTGAGGGAAGCTGTGACAAGGAAGAACCTCCCTGAGG-------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47472639 113 + 50890351 --gacatgaagagagaTGGGGTGGAGGGTGACAGAGAG----------CATTAGGTCATAGAGCAGGGGAGTGAGTTCTCAGCTCAGGTGTGAAGGGA-CTGTGACAAGGAAGAACCTCCCTGAAG-------------- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19893280 113 - 122678785 GGACCATG--GGGTCACAGGTCAGAAACTGAGAGGGTGAGGGAC----AGTGAGACCCAGGAGTCAGGATGGGAG-----------------AAGGGAG----GATTGGGGAGAATCAGCCTACAATCCATGGCCTACAA i canFam3.chr1 C 0 C 0 e calJac3.chr22 45771739 621 + 49145316 I e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=81989.000000 s hg38.chr19_GL949747v2_alt 484655 60 + 729520 AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGC s panTro4.chr19 59724302 60 + 63644993 AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56636014 60 + 60714840 AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47747055 60 + 51301725 AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47472752 60 + 50890351 AAACTGCCTCTTCTCCTTCCAGGTCTATATGACAAACCTTCTCTCTCAGCCCAGCCAGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772360 60 + 49145316 AATCAGCCTCTTTTCCTCCCAGGAAAACACAAAAAGCCTTCTCTCTCCACCCAGGAGGAC i calJac3.chr22 I 621 C 0 s canFam3.chr1 19893393 60 - 122678785 TCCATGGCTGGTCTTCTCCCAGGTGTGTTGGGGAAGCCCTCCCTCTTGACCCAGCAGGGC i canFam3.chr1 C 0 I 507 e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=581551.000000 s hg38.chr19_GL949747v2_alt 484715 600 + 729520 CCCACGGTTCTGGCAGGAGAGAATGTGACCTTGTCCTGCAGCTCCCGGAGCTCCTATGACATGTACCATCTATCCAGGGAAGGGGAGGCCCATGAACGTAGGCTCCCTGC-----AGGGACCAAGGTCAA--CGGAACATTCCAGGCCAACTTTCCTCTGGGCCCTGCCA------CCCATGGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGACTCTCCATACGAGTGGTCAAAGTCAAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAAAGCCCATGGCTGTC----CCATGTCCTA----T---------GATCCTAGAGCCTTAGCTGAGGAGCTTCCTGCTG--------------------ATGATGGAGA----GAAGCATGGACAGATGCAGAGA-GAAGACGCAGCCTCGGTGTGAGGGAGGGATCAGGGCACAGGATGGCCGACAGGGCACCTCCAAACCCTCCTACAT---GGCCTGCATGGAGGCCCACGGCCAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGCGG--------------TCAGGAGAGACCCAGA-GGAGG-----GAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAGCC------CATCCTGGCCTCTCACCCACA s panTro4.chr19 59724362 600 + 63644993 CCCACGGTTCTGGCAGGAGAGAATGTGACCTTGTCCTGCAGCTCCCGGAGCTCCTATGACATGTACCATCTATCCAGGGAGGGGGAGGCCCATGAACGTAGGCTCCCTGC-----AGTGACCAAGGTCAA--CGGAACATTCCAGGCTGAATTTCCTCTGGGCCCTGCCA------CCCAGGGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGTATCTCCCTACGAGTGGTCAAACTCGAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAAAGCCCATGCCTGTC----CTATGTCTTA----T---------GATCCTAGAGCCTTAGCTGAGGAACTTCCTGCTG--------------------ATGATGGAGA----GAAGCGTGGACAGATGCAGAGA-GAAGATGAAGCCTGCATGTGAGGGAGGGATCAGGGCACAGGATGGCAGACAGGGCACCTCCAAACCCTCCTGCAC---GGCCTGCATGGAGGCCCACGGCCAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGCGG--------------TCAGGAGACACCCAGA-GGAGG-----GAGACTGGGCTCAGTTTGGGGACATCAGAGGTTCCCTCAGCCCCTTAACCTTACCCA-TTTCCCAGAAGCC------CTTCCTGGCCTCTCATCCACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56636074 600 + 60714840 CCCAGGGTTCAGGCAGGAGAGAATGTGACCTTGTCCTGCAGCTCCCGGAGGTCCTATGACATCTACCATTTATCCAGGGAGCAGGGGAGCCGTGAATGTAGGCTCCCTGC-----AGTGTCCAAGGTCAA--TGGAACATTCCAGGCAGACTTTCCTCTGGGCCCTGTCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGACTCTCCCTACGAGTGGTCAAACTCGAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGAAAACCCCATATCTGTC----TCATGTCCTG----T---------GATCCTAAAGCCTTAGCTGAGGAGCTTCCTGCTG--------------------ATGATGGAGA----GGAGCATGGACAGATGCAGAGA-GAACACGCAGCTTGGGTGTGAGGGTGGGGTCAGGGCGCAGGATGGCAGACACGTCACCTCCAAACCCTCCTGCAT---GGCCTGCATGGAGGCCTCCGATCAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGCGG--------------TCAGGATAGACCCAGA-GGAGG-----AAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCTCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAGCC------CCTCCTGGCCTCTCACCCACA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47747115 599 + 51301725 CCCACGGTTCCCACAGGAGAGAACATGACCTTGTCCTGCAGTTCCCGGCACTCCTTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCCATGAACTTAGGCTCCCTGC-----AGTGCCAAGCGTCAA--TGGAACATTCCAGGCTGACTTCCCTCTGGGCCCTGCCA------CCCATGGAGGGAACTACAGATGCTTCGGCTCTCTCCGTGACTCTCCCTATGAGTGGTCAGACCCGAGTGACCCACTGCCTGTTTCtgtcacaggtgaggaaaccccATGCCTGTC----CCATGTCTTA----T---------GATCCCAGAGCCATAGCTGGGGAGCTTCCTGCTG--------------------ATGATGGAGA----GAGGGATGGACAGATGCAGAGA-GAAGGCGAAGCCTCGGTGTGAGGTTGGGGTCAGGGCACAGGAGGGCAGACACAGCACAT-CAAACCCTCCCGCAC---TGCCTGCATGGAGGCCTGCGGTCAGGGCTCCAGGCACCCaggcagatggagaaactgg--------------TCAGGACAGACCCAGA-GGGGG-----GAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAACC------CATCCTGGCCTCTCACCCACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47472812 599 + 50890351 CCCACAGTTCAGGCAGGAGAGAACGTGACCTTGTCCTGCAGCTCCCAGACCTTGTTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCCGTGACCTTAGGCTCCCTGC-----AGTGCCAAACATCAA--TGGAACATTCCAGGCCGACTTCTCTCTGGGCCCTGCCA------CCAACGGAGGAACCTACAGATGCTTTGGTTCTTTCCATATCGCACCCTACGAGTGGTCAGACCCGAGTGACCCACTGCCCGTTTCTGTCACAGGTGAGGAAACGCCATGCCTGTC----CCATGTCTTA----T---------GATCCCAGAGCCATAG-TGAGGAACTTGCTGCTG--------------------ATGATGGAGA----GAAGCATGGACAGGTTCAGAGA-GAAGACCAAGCCTCAGTGTGAGGGCAGGATCAGGACGCAGGATGGCAGAGAGGGCACCTCCAAACCCTCCTGCAT---GGCCTGTGTGGTGGTCCGCGGTCAGGGCTCCAGGCCCCCAGGCAGATGGAGAAACTGG--------------TCAGGACAGACCCAGA-GGAGG-----GAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCTGAAGCC------CATCCTGGCCTCTCACCCACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772420 600 + 49145316 CCCAGGATGGGGAGTGGAGAGAACGTGACGTTATTCTGCATCTCTGAAATCTCATTTGACCGGTACCATCTGTGGAGAGAGGGGGCTCCTTATGGCCAGTGGCTCAGTGG-----AGGTCAGGGACACAG--GGGAGCATTCCAGGCCAACTTTTCTGTGGGCCTCGCAACGCCAGCCCATGGAGGGACCTATAGATGCTACGGTTCTTTCAATGCCTCCCCCTATGAGTGGTCGGCCCCCAGTGAGCCCCTGCACCTTTCTGTCACAGGTGAGGAG--CCCACACCTGCC----ACCTGTCCTG----TTGTCCACTAAGTCCCAGAGCCATACCAGAGGGGCATCCCACTGGGCACACAGGGGCATTAGGTATTCTGGACAAAATGAAGCAGTGAAAAATACAGACAGGGATGAACAGGCTGAGTGGGATGGGGCTGTCAGGGTGCAGGGC-ATAGACAGGGCAGCTCTGCGCCCTCC---------------------GCCC----------CTCC-----------TACATGAAGAAAGAGG--------------TCAGGGCAAACACAGGTGGAGG----TGAGGCCAGATGGAGTTTGTTGAGATCAGAGGTTGCCTCAGCCCCTCGCCCTTTTCCATTTTCTCCGAAGCC------CCTCCTGACCCCTCA-CCACA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19893960 574 - 122678785 CCCACGGTGGCCCCAGGAGAGAATGTGACCCTGCTGTGTCAGTCACTGAGCAATGTGGACACATTCCTTCTGTCCAAGGATGGGGCAGCTGATGC-------CTCCTTGCGTCTTAGATCGAAGTACCGAGCTGGGAAGTACGAGGCTGAATTCTCCATGAGTCCTGTGACCCCAGCCCATGGGGGGACCTACAGGTGCTACGGCTCTATCAAAACCTCTCCCTACCTGTTGTCATACCCCAGTGTCCCCGTGGAGATCCTGGTCTCAGGTGAGTAGCCCTTGCCCCTGTCCCCTCCATGTGCTAACATT---------GTTCTCAGGGCCCTG--------------TGCCC---------------------------ACA----AAAGCACAGG-----GCTGGGA-----------------TGGGAGAGGG------GGGCTCTGAGGGGTCCACCCCTCACACT---GCCCTCCTACACCTGGTTCTTCTCTCGACCCCGTCACCAGAATTCTC----------CAGGTGGAGGAGGAGGAGTACCTGGGGACCTCAGGGTAAATAAGGA-GGAGGAGTGTGAGCATAGGCAGGGTCTCTG----TGGGAAGCTCT---AGCCTCCTCTCCTGACTTT-TTTCCCAGGATCCTTTGGACACCATGGCCCCCCACCCACA i canFam3.chr1 I 507 T 1689 e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=9167.000000 s hg38.chr19_GL949747v2_alt 485315 10 + 729520 CAGAGATGTC s panTro4.chr19 59724962 10 + 63644993 CAGAGATGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56636674 10 + 60714840 CAGAGATGTC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47747714 10 + 51301725 CAGAGATAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47473411 10 + 50890351 CAGACATATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45773020 10 + 49145316 GAGAGATTTC i calJac3.chr22 C 0 T 3104 e canFam3.chr1 19894534 1689 - 122678785 T e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=51651.000000 s hg38.chr19_GL949747v2_alt 485325 69 + 729520 ATCACCAGCAACCCCTACACCCTTTACTTTTC-TTTGAAGAAATATTTATTGAGGATAAATATACCTATA s panTro4.chr19 59724972 70 + 63644993 ATCACCAGCAACCCCTACACCCTTTTCTTTTTGTTTGAAAAAATATTTATTGAGGTTAAATATACCTATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56636684 70 + 60714840 ATCACCAGCAACCCCTACACCCTTTTCTTTTTCTTTGAAAAAATGtttattgaggtgaaatatacccata i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47747724 70 + 51301725 ATCACTAGCAACCCTTACACCCTTTTCTTTTCAATTGAAAAAATGCTGATTGAGGTTAAGTATACCTGTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47473421 70 + 50890351 ATCACCAGCAACCCTTGCACCTTTTTCTTTTCATTTGAAAAAATATTTGttgaggttaaatatacctata i chlSab2.chr6 C 0 T 78063 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=36827.000000 s hg38.chr19_GL949747v2_alt 485394 82 + 729520 TAGCTTACCACTTTTAACAttttttttt--------gaggtggag--tctagctgtgtcccctatgctggagtgcagtgg--------cacaatctcagc s panTro4.chr19 59725042 89 + 63644993 TCGTTTACCACCTTTAACtttttttttttttt-tttgaggcagag--tctagctctgtcccctatgctggaacgcagtgg--------cacaatctcagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56636754 84 + 60714840 tagcttaccacctttaacattttttttttttt------ggtggag--tctagctctgtcccctatgctggagtgcagtgg--------cacaatctcagc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47747794 73 + 51301725 TAATTTACCAAcgttaccattttt-------------aagtgtaaaatctaggcc--------------gggtgcagtggctcacgcttgtaatctcagc i papAnu2.chr19 C 0 T 31543 s chlSab2.chr6 47395428 92 + 50890351 tagtttaccacttttaacatttttttttttttttttgaggcggagtctcttgctctgtcccctatgctggagtacagtgg--------tgcaatctcggc i chlSab2.chr6 T 78063 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=529774.000000 s hg38.chr19_GL949747v2_alt 485476 668 + 729520 tcactgcaacctccacctcctgggttcaagcgattctcctgcctcagccacctgagtagctggtgctacaggcacgcaccaccacgccaggctactttttgtatttttagtagggaggtggtttcaccatgttggtcgagctggtctcgaactcctgaccaagtgatccacccgcatctgcctcccaaagtgctgggattacaggcatgggccaccgcgcccagccACATTTACCATTTTTAAGTGTAAAGTCTAGTGGTcataaatacatttatatacatatatatatatatacat--------------------------------------------------------------------TTTTTTTAccctccacccttttcttcctgtcctccagtagccaccattctactctctaccttcatgagatccaccttttagctcctgtatatgggtgagaaatgggaatctttgtaatgacctccagttccatccatgtggctgcaaatgacaggatgttattctttctatggatgagtagtctccactatgcgtatgtactacattctctctatccatttacccactgatgggcaggtaggttgactcctcatcttggctactgtgaacagtgctgcaccaatcatacgagtgcagatatcacttcgatatattgatttactttcctttggatataaacccagtagtgaaattgctggatactatgaaag s panTro4.chr19 59725131 704 + 63644993 tcactgcaacctcaacctcctgggttcaagcgattctcctgcctcagccacctgagtagctggtactacaggcgcgcaccaccatgccaggctactttttgtatttttagtagagagggggtttcaccatgttggtcgagatggtctcgaactcctgaccatgtgatccacccccatcggcctcccaaagtgctgggcttacaggcatgagtcaccacgcccagccACATTTACCATTTTTAAGTGTAAAGTCTAGTGGTCataaatacatatatatatatatatatatatatatatatatatatatatatatataCtttttttttttttttt--------------------------------tttttttaccctctacccttttcttcctggcccctggtagccaccattctactctctaccttcatgagatcgaccttttagctcctgtatatgggtgagaaatgagaatctttgtaatgacttccagttccatccatgtggctgcaaatatcaggatgttattctttctatggatgagtagtctccactgtgcgaatgtactacattctctctatccattcatccactgatgggcaggtaggttgactccacatcttggctactgtgaacagtgctgcaccaatcagacgagtgcagatatcacttcgatatattgatttactttcctttggatataaacccagtagtgaaattgctggatactatgaaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56636838 669 + 60714840 tcactgcaacctccgcctcctgggttcaaacgattctcctacctcagccacctgagtagctggtactacaggcacgcaccaccatgccaggctactttttgtattttgagtagagagggggtttcaccatgttggtcgagctggtctcgaactcctgaccacgtgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccaccgcgcccggccacttttaccatttttaagtgtaaattctagtggtcataaatacatttataTATATATAt----------------------------------tttttttttttttt--------------------------------tttttttAccctccacccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgtatatgggggagaaataggaatctttgtaatgacttcgagttccatccatgtggctgcgaatgacaggatgttattctttctatggatgagtagtctccactgtgcgtatgtactacagt-tctctatccattcacccactgatgggcaggtaagttgactccacatcttggctacggtgaacagtgctgcaccaatcatacgagtgcagatatcacttcgatatattgatttcctttcctttggatataaacccagtagtgaaattgctggatactatgaaag i ponAbe2.chr19 C 0 T 55708 s papAnu2.chr19 47716324 735 + 51301725 tcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagccacccgagtagccggtactacaggtgtgcaccaccaggccaagctaatttttgtatttttagtagagacagggtttcatcatattggtcgggttggtctccaactcctgacctcgtgacctgcctgcctcggcctcccgaagtgctgggattataggtgtgagccaccactcccagccacctttaccatttttaagtgtaaagtcAAGTGgtcataaatacatttatatatttatgtgtgtgtgtgtgtatacatatatgtgtatatatatgtgtgtgtatatatgtgtatatatatgtgtgtacatatatatatatttttttaaccctcctcccttttcttcctggcctctggtagccaccattctactctctaccttcatGAGAT-CACCTTTTAGCTCCCGCCTATGGGTGAGAAATGGGAATCTTTGTAATGagctccagttccatccatgtggctgcaaatgTCAGGGTGTTATTGTCTCTATGGATGAGTAGTCTCCACTGTGTGTATGTACTACATTCTCtctatccattcacccactgagGGGCAGGTAGGTTGCCTCCAcgtcttggctactgtgaacagtgctggaCCAATCATACGAGCGCAGATATtacttcaatatactgatttcctttcctttggataaaaacccagtagtgaaattgctAGATACTATGAaag i papAnu2.chr19 T 31543 C 0 s chlSab2.chr6 47395520 711 + 50890351 tcactgcaacctccgcctcctgggttcaagcaattatcctgcctcagccacctgagtagccggtactacaggcatgcaccaccacgccaggctaatttttgtatttttagtagagacagggtttcactatattggtcgggttggtctcgaactcctgaccacgtgatccgcctgcctcagcctcccgaagtgctgggattacaggtgtaagccaccatgccaagccacctttaccatttttaagtgtaaagtctagtggtcataaatacatttataCATTTAtgtgtgtgtgtgtgtatatatatgtgtgtatatatatgtgtgtgtgtgtatatatata-------------------------tTTTTTAAccttcctcccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcccgcctatgggtgagaaatggaaatgtttgtaatgagctccagttccatccatgtggctgcaaatgtcaggatgttattgtctctatagatgagtagtctccactgtgtgtatgtactacattctctctatccattcacccactgaggggcaggtaggttgtctccacatcttggctactgtgaactgtgctggaccaatcatacgagtgcagatatcacttcgatgtactgatttcctttcctttggatataaacccagtagtgaaattgctggatactatgaaag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=6550.000000 s hg38.chr19_GL949747v2_alt 486144 7 + 729520 ttctctt s panTro4.chr19 59725835 7 + 63644993 ttctctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56581799 7 + 60714840 ttctctt i ponAbe2.chr19 T 55708 C 0 s papAnu2.chr19 47717059 7 + 51301725 ttctctt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47396231 7 + 50890351 ttctctt i chlSab2.chr6 C 0 I 54 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=1638.000000 s hg38.chr19_GL949747v2_alt 486151 3 + 729520 ttt s panTro4.chr19 59725842 3 + 63644993 ttt i panTro4.chr19 C 0 I 47652 s ponAbe2.chr19 56581806 3 + 60714840 ttt i ponAbe2.chr19 C 0 I 16 s papAnu2.chr19 47717066 3 + 51301725 ttt i papAnu2.chr19 C 0 I 16 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e chlSab2.chr6 47396238 54 + 50890351 I e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=12203.000000 s hg38.chr19_GL949747v2_alt 486154 37 + 729520 ttctttttttcttttttgagaaagagtttccctcctt s panTro4.chr19 59773497 37 + 63644993 ttttttttttcttttttgagaaagagtttccctcctt i panTro4.chr19 I 47652 C 0 s ponAbe2.chr19 56581825 35 + 60714840 tttttgtttttgtttttgagac--actttccctctgt i ponAbe2.chr19 I 16 I 55696 s papAnu2.chr19 47717085 35 + 51301725 tttttgttttggtttttgagac--agtttccctctgt i papAnu2.chr19 I 16 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e chlSab2.chr6 47396238 54 + 50890351 I e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=91.000000 s hg38.chr19_GL949747v2_alt 486191 1 + 729520 a s panTro4.chr19 59773534 1 + 63644993 a i panTro4.chr19 C 0 T 47640 e canFam3.chr1 19894534 1689 - 122678785 T e ponAbe2.chr19 56581860 55696 + 60714840 I e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e chlSab2.chr6 47396238 54 + 50890351 I e papAnu2.chr19 47717120 0 + 51301725 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=233249.000000 s hg38.chr19_GL949747v2_alt 486192 296 + 729520 gcccaagctggagtcaaagtggtgcgaccttggctcattgcaacctacgcctcctgggttcaaatgattttcctgcctcagcctccctagtagctgggattacaggtgcacaccaccatgcctggctactttttggtttttttagtatagatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgaggtgcccgcctcagtctcccaaagtgccgggattacaggcatgatccaccgcacccaacctctttttagttctttaaaggacttccatacttt s panTro4.chr19 59725895 296 + 63644993 gcccaggctggagtacaagtgatgtgatcttggctcattgcaacctccgcctcctgggttcaaatgattttcctgcctcagcctccctagtagctgggattacaggtgcacgccaccatgcctggctactttttgttttttttagtatagatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgaggtgcccgcctcggtctcccaaagtgccgggattacaggcatgatccacctcatccaacctctttttagttctttaaaggacttccacacttt i panTro4.chr19 T 47640 C 0 s ponAbe2.chr19 56637556 296 + 60714840 gcccaggctggagtacaagtgatgtgatcttggctcattgcaacctccgcctcctgggttcaaacgattttcctgcctcagcctccttagtagcagggattacaggtgcacacccccatgcctggctactttttcttttttttagtatagatggggtttccccatgttggctgagctgctctcaaactcatgacctcaactgaggtgcccgcctcggtgtcacaaagtgctgggattacaggcatgatccaccgcacccaacctctttttagttatttaaaggacttccatacttt i ponAbe2.chr19 I 55696 C 0 s papAnu2.chr19 47717120 295 + 51301725 gcccaggttggagttcaagTGATGTGATCttgcctcattgcaacctccaccccctgggttcgaatgattttcctgcctcagcctccctagtagctgggattacaggtgcatgccaccatgcctggctactttttgtactttttagtacagatggggtttccccatgttggccaggctgctctcaaactcatG-CCTCAAGTGAGGTGCCCACCTCagtctcgcaaagtgctgggattacaggtgggagccactgcgcccaatctatttttagttatttaaaggAGTTCCATACTTt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47396292 288 + 50890351 gcccaggctggagttcacgtgatgcgatc--------ttgcaacctccacctcctgggttcaaacgattttcctgcctcagcctccctagtagctgagattacaggtgcatgccactatgcctggctactttttgtactttttagtacagatggggtttccccatgttggccaggctgctctcaaactcatgacctcaagcgaggtgcccgtctcgctctcccaaagtgttgggattacaggcatgagccaccatgcccagcctctttttagtttcttaaagaacttccatacttt i chlSab2.chr6 I 54 I 91611 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=206082.000000 s hg38.chr19_GL949747v2_alt 486488 416 + 729520 tctccgtaatggctgtactaatttacactcctcccaacagggtaccagggttctcctttctctaccaccttgccagcatttcttttgcctgtcttgcagctaaaagcc------------------------------attttattttatttcattttattttgagatggagttttgctcttctcacccaggctggagtgcagtggcgcgatctcggctcaccacaacctccacctcccaggttcaagcgattctcctgcctcagcctcccgagtagctggaattacaggcacacgccaccacgcccgactaatttttgtatttttagtagagacagtgtttctctatgtgggtcatactggtctcaaactcccgaccttatgagattcacccacctcaggctctcaaagttctaggatgacaaacgtgagccacctcacccggcc s panTro4.chr19 59726191 416 + 63644993 tctccgtaatggctgtactaatttacactcctaccaacagggtaccggggttctcctttctctaccactttggcagcatttctttcgcctgtcttgcagctaaaagcc------------------------------attttattttatttcattttattttgagatggagtttcgctcttgtcacccaggctggagtgcagtggcgcgatctcggctcaccgcaacctccacctcccaggttcaagcgattttcctgcctcagcctcccaagtagctggaattacaggcacacgccaccacgcccggataatttttgtgtttttagtagagacagtgtttctccatgtgggtcaggctggtctcaaactcccgacctcaggagattcgcccacctcgggctctcaaagttctaggatgacagacgtgagccaccacgcccagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56637852 446 + 60714840 tctccgtaatggctgtactaatttacactcctaccaacagggtaccagggttctcctttctctacccccttgccagcatttcttttgcctgtcttgcagctaaaagccattttattttattttattttattttattttattttattttattttattttattttgagatggagtttcgctcttgtcacctaggctggagtgcagtggcgcgatctcagctcaccgcaacctccacctcccaggttccagtgattctcctgccccagcctcccgagtagctgggattacaggcacatgcaaccacgcccggctaatttttctatttttggtagagacagtgtttctccatgtgggtcaggctggtctcaaactcccgacctcaggagattcgcccacctcaggctctcaaagttctaggatgatagaggtgagccaccacgctcggcc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47717415 440 + 51301725 tctccataatggctgtactaatttacactcctaccaacagggTACCAGGGTTCTCCTTTCTCTACcaccttgccagcatttgttttgCCTGTCTTGCAGCtaaaagcc-----attttattttattttattttattttattttattttattttattttattttgagatggagttgtgctcttgtcacccaggctggagtgcagtggcgcgatctcagctcaccgcaacctccacctcccgggttcaa-tgattctcctgcctcagcctcccaaatagctggaattacaggaatgtgccaccacgcccagcttatttttgcatttttagtagaaacagtgtttctcCACGTGggtcaggcgggtctcaaactcccgacctcaggtgattcacccacctcaggctctcaaagtgctaggatgatagacgtgagccaccacccccagcc i papAnu2.chr19 C 0 I 39523 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e chlSab2.chr6 47396580 91611 + 50890351 I e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=25340.000000 s hg38.chr19_GL949747v2_alt 486904 102 + 729520 taaaagccattttaatggggtgagatgaaaactcactttgaatttaatttgcgtttctctgatgatgagtgatactgagcagtttttcgtatgtggggaaat s panTro4.chr19 59726607 102 + 63644993 taaaagccatgttaatgggatgagatgaaaactcacttcaattttaatttgcatttctctgatgatgagtgatactgagcactttttcatatgcggggaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638298 102 + 60714840 taaaagccattttaatggggtgagatgaaaactcacttcgattttcatttgcatttctctgatgatgagtgatactgagcacttcttcatatgcggggaaat i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e chlSab2.chr6 47396580 91611 + 50890351 I e papAnu2.chr19 47717855 39523 + 51301725 I e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=151500.000000 s hg38.chr19_GL949747v2_alt 487006 327 + 729520 ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttgtttgagcttcttatatttctagttattaatcccatctcagatgcatagtttgcacatatttgctcccaatctgtgggttgtctcttcactttgttggtttatt-tttagcggtgcagaagttgcttagtatgaggtaatccca-atggtcta-tttttgcttcgattacttgtgttttcaaggtttaaaacaaaatgtctttcttcagacaaatgtcctggagcatttccccaatattttgttctacgtgtttcataggttcaggccttagactcacatc s panTro4.chr19 59726709 327 + 63644993 ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttgtttgagcttcttatatttctagtcattaatcccatctcagatgcatagtttgcacatatttgctcccaatctgtgggttgtctcttcactttgttggtttatt-tttagcggtgcataagttgcttagtttgaggtaatccca-atggtcta-tttttgcttcgattacttgtgttttgaaggtttaaaacaaaatgtcttccttcagacaaatgtcgtggagcatttccccaatattttcttctacgtgtttcataggttcaggccttagactcacatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638400 328 + 60714840 ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttgtttgagcttcttatatttctagttattaatcccgtctcagatgcatagtttgcacatatttactcccaatgtgtgccttgtctcttcacgttgttggtttatc-tttagtggcgcagaagttgcttagtttgatgtaatccca-atggtctattttttgctttgattacttgtgttttgaaggtttaaaacaaagtgtctttcttcagacaaatgtcctggagcatttccccaatattttcttctacgtgtttcataggttcagcccttagactcacatc i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47488191 329 + 50890351 ttcaagtcttttgctcattttttagttaaattgtttgttttattgagttatgtgagcttcttatatttctagtta-taatcccgtctcagatgcatagtttgcaaatattggctcccattctgtgggttgtctcttcactttgttggttgcttattttgcagtgcagaagctgcttagtttgatgtaatcccctacggtccgttttttgctttgattactcgtgtttttgaggttttaaacaaaatgtcttttctcagaccgatgtcctgaagcatttccccaatattttcttctacatgtttcataggttcagggcttagactcatgta i chlSab2.chr6 I 91611 T 14604 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e papAnu2.chr19 47717855 39523 + 51301725 I e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=11187.000000 s hg38.chr19_GL949747v2_alt 487333 22 + 729520 tttaatccattttcatttgatt s panTro4.chr19 59727036 22 + 63644993 tttaatccattttcatttgatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638728 22 + 60714840 tttaatccattttcatttgatt i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47473916 22 + 50890351 tttaatccattttgatttgact i chlSab2.chr6 T 14604 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e papAnu2.chr19 47717855 39523 + 51301725 I e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=1081585.000000 s hg38.chr19_GL949747v2_alt 487355 1409 + 729520 tttgtgtatggtgacaggtagaggtgcagtttcattcctctgcatgtagatgtccaggtttccctgcactgtttattgaaaagactgtcctttcctgattgtgagttcttggcatctttgtcaaagtccattggatgggctgggcttggtggctaacacctgcaatttcagcactttgggagcccgaggtgggtggatcacctgaggccaggagttcaagattagtctggccgacgtgatgaaacatcatctccactaaaaatataaaaattagctgagcatggtggtcagcacctgtaataccactactcaggagtttgaggcaagagaat-gattgaacccaggaggctgaggttgcagtgaaccgagattgcacctttgcactccagcctgagtgacagagcaagactccatctc---aaaagaaaaaataaaaaaccattggatgtaaatgcatggaatatatctgtgttattcattctgctccgttgttctatgtgcctttctttatgccagtgtcatgctattttgcttactacagctctgtaacatattttgagatcaggtagtgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGGGTGTCACATAAAAAAATTATGGAAAAAAGGATCCCAGGACTCCCAGGGCCCAATATTAGATAACAGAGTGTTGGCCATGAACCATCCTCAAAGATTTCCACTGAGTGGAGGACAGAAACCCTCATTTCCTCACCTCTCTCCTGTCTCATGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACTGAACCAAGCTCCGAAACCGGTGAGTACAGAA-CCCTCTTATATCCGCTTTTGGAAACCTGGGGAGGTGGAAACCTTGGATTCAGGCGTTGACTCAGCATCTCACAGCTCTGACATTGTACACCTGTCTTCCACCA--TCTCCGAACTCCAGATACTCCTACAGCGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTCATCTCTCATTTTATGGAGCTGAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAG-GAAAAATGCAATGTTTGTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGAGACTTGAGAGAGGGAAGGGAAGGGAACATCTGATGAGGGCGAGGTGTTTTAGAGAAGTTCCACTTGCCAAGGAATGAGCTCCTGTAGGTCATGAAGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCCGTAACAGAGAACAGAGCTCATGCACACACACTTCGACTCACTGACTCATTCAGCCACGGCCCCATGCTCAGGCTGTGCAGTGCGGAACCTtt-tcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaacg s panTro4.chr19 59727058 1410 + 63644993 tttgtgtatggtgacaggtagaggtgcagtttcattcttctgcatgtagatgtccaggtttcccggcactgtttattgaaaagactgtcttttcctgattgtaagttcttggcacctttgtcaaagtccgctggatgggctgggcatggtggctaacacctgcaattccagcactttaggaggccgaggcaggtggatcgcctgaggccaggagttcaagatcagcctggccaacatggtgaaacatcatctctactaaaaatacaaaaattagctgagcatggtggtcagcacctgtaataccactactcaggagtttgaggcgagagaattgattgaacccaggaggctgaggttgcagtgaaccaagattgcacctctgccctccagcctgggtgacagagtgaaactccacctc---aaaagaaaaaatcaaaaaacattggatgtaaatgcatggattatatctgtgttcttcattctgctccattgttctatgtgcctttctttatgccaacatcatgctgttttgcttactacagctgtgtaacatattttgagatcaggtactgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGGGTGTCACATACAAAAATTACGGAAAAAAGGATCCCAGGACTCCCAGGGCACAATATTAGATAACAGAGTGTTGGCCGTGAACCAACCTCAAAGATTTCCATTGAGTAGAGGACAGGCAGCCTCATTTCCTCACCTCTCTCCTGTCTCATGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACTGAACCAAGCACCAAAACCGGTGAGTACAGAA-CCCTCTTATATCCGCTTTTGGAAACCTGGGGAGGTggaaaccttggattcaggcgttgactcagcatctcacagctctgacattgtacgcctgtcttctacca--tctctgaactccagataccccaacagcgaaagggatCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTAATCTCTCATTTTATGGAGCTGAGACCTCCTACAAGCTAGAAGAATGATTGGCAATCTGACATCCTTCTCAG-GAAAAATGCAATGTTTGTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTTGAGAGAGGGAAGGGAAGGGAACATCTGATGAGGGCGAGGTGTTTTAGAGAAGTTCCACTTGCCCAGGAATGAATTACTGTTGGTCATGAAGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCCGTAACAGAGAACAGAGCTCATGCACGCACACTTCGACTCACTGACTTATTCAGCCACGGCCCCATGCTCAGGCTGTGCAGTGTGGAAGCTtt-tcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaacg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638750 1411 + 60714840 tttgtgtatggtgacaggtagaggtgcagtttcattcttctgcatgtagatgtgcaggtttccctgcactgttgattgaaaagactgtcctttcctgattgtaagttcttggcacctttgtcaaagtccagtggatgggctgggcatggtggctaacacctgcaattgcagcactttgggagaccgaggcaggtggatcacctgaggccaggagttcaagatcagcctggccaacatggtgaaacatcgtctctactaaaaatacaaaaattagctgagcatggtggtcagcccctgtaataccactactcaagggtttgaggtgagaaaattgattgaacccaggaggctgaggttgcagtgaaccgagattgcaactctgcactccagcctgggtgacagagtgagactccatctc---aaaagaaaaaataaaaaaccattggatgttaatgcatggattatatctgtgtacttcattctgctccattgttctatgtgcctttctttatgccaacgtcgtgctgttttgcttactacagctctggaatgtatttttagatcaggtagtgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGGGTGTCACATATAAAAATTATGGGAAAAAGGATCCCAGGACTCCCAGAGCCCAATATCAGATAACACAGTGTTGGCCATGAACCTACCTCAAAGATTTCCATTGAGTAGAGGACAGACACCCTCATTTCCTCACCTCTGTCCTGTCTCGTGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACGAAACCAAGCTCCAAAATCGGTGAGTACAGAA-CCCTCTTATATCTGCCTTTGGAAACCTGGGGAGGTGGAAACCTTGGATTCAGGCATTGATTCAGCATCTCACAGCTCTGACATTGTGCACCTGTCTTCCACCA--TCTCCGAACTCCAGATACTCCAACAGCGCAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTAATCTCTAATTTGATGGAGCTGAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAGAAAAAAATGCAATATTTGTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTTGAGAGCGGGAAGGGAAGGGAACATCTGATGAGGGCGAGGTGTTTTAGAGAAGTGCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAAGCAACCCTGGCTGACTCCGCAGAGCAAGAGCCTTGCCATAACAGAGAACAGAGCTCATGCACGCACACTTCGACTCACTGACTCATTCAGCCACGGCCCCATGCTCAGGCTGTGCAGTGTGGAACCTtt-tcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaatg i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47757378 1407 + 51301725 TTTGTGAATGGTGAGAGGTACAGGTGCAATGTCATTCC-CTGCATGTAGATAACCCATTTTCCCCGCAtcgtttattgaaaagactgtcctttcctgaTTGTaggttcttgacacctttgtcaaaatgcattgtattggctgggcatggtggctcacacctgcagtcccagcactttcagaggccaaggtgggtggatcacctgagaccaggagttcgaggcccgcctggccaacatagtaaaaccctgtctccactaaaagtacaaaacttagctgagcatggtggtcaGCGCCTGTAATACCACTACTCGAgtgtctgaggcaagagaattgcttgaattcaggagacggaggttgctgtgagccgagattgcacctctacactccagcctcggtgacagagcaagattccatctcaaaaaaaaaaaaaaaaaaaagccgttgAATGTAGACGCATAGATTATATCTCTGTTCTTCATTTTACTCTGTTGTTCTATGCACTTTTCTCTATGCCAACGTCATGGTGTTTTGTTTACTACAGCTCTGTAACATATttttaagtcaggtaatgtgatattCCTGTTTTCTCTCTATATCTTAAAGTCTCCAGACAATGGGCAACACATACAAAAATCGTGGAGAAGAGGATCCCAGGACTCCCAGAGCCCAGTGTTGGATAACAGAGTGTTGGCCGTGAAGCAACCTCAAAGATTTCCCTTGAGTAGAGGACAGGCACCCtcatttcctcacctctctcctgTCTC-TATTCTAGGAAACCCTTCACGTAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCGGTGAGTAAAGAATCCCTCTTATCTCTGCTTTTGGAAACCCGGGGAGGTGGAAGCCTTGGAGTCAAGCCTTGGCTCAGCACCTCCCAGCTCTGAT--TGTGGGCCTGTCTTCCACCATCTCTCTGAACTCCAGACACTCCAAAAGCAAAAGGGATCTTGGCCCAGCACAGGGCTCAGTGAAGTCTCTTAGTCTCTAATCTTCTGCAGCTGAGACCTCCTACAAGCTGGAAGAAAGATTGCAAATCTGACATCCTTCTCAA-GAAAAATGCAG----TGTTCTCCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCttgaaagagggaagggaagggaacatcTAATGAGGGTGAGGTGTTTTAGAGAAGTTCCACTTGCCAGGGAATGAACTCCTGTAGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTG-AGTAACAGAGAACAGAGCTCATGCACGCACACTTCGACTCACTGACTCATTCAGCCACGGCCCCATGCTCAGGCTGTGCAGT-TAGAATCCTTAACCTGTTGTTACcataacaaatttccacaaaattGGTGGATGAAAACAAAATG i papAnu2.chr19 I 39523 T 8228 s chlSab2.chr6 47473938 1391 + 50890351 tttgtgaatggtgagaggtagaggtgcaatttcattcc-ctgcatgtagataaccagttttccccgcatcattttttgaaaagactgtcctttcctgattgtaggttcttggcacctttgtcaaaatgcattggattggctgggcatggtggctcacacctgcaatcccagcactgtcagaggccaaggtgggtggatcacctgagaccaggagttcgaggcccgcctggccaacatagtaaaaccctgtctccactaaaagtacaaaaattagctgagcatggtggtcaactcctgtaataccactactcaagagtctgaggcaagagaattgcttgaattcaggagacggaggttgctgtgagtcaagaatgtacctctgcactccagcctgggtgacagagcaagattccatctc----------aaaaaaaaaagccgttgaatgtagacgaatagattatatctgtgttcttcatttttctccattgttctatgcacttttctttatgccaacgtcatgctgttttgtttactacagctctgtaacatatttttaagtcaggtaatgtgatgttcctgttttCCCTCTATATCTTAAAGTCTTGAGACAATGGATAACACATACAAAAATTATGGAGAAGAGGATCCCAGGACTCCCAGAGCCCATCGTTGGATAGCACAGTGTTGGCCATGAACCAACCTTAAAGATTTCCCTTGAGTAGAGGACAGGCACCCTCATTTCCTCACCTCTGTCCTGTCTC-TATTCTAGGAAACCCTTCACGTAGTTGGCCTTCGCCCACTGAACCAAACTCCAAAACCGGTGAGTAAAGAATCCCTCTTATCTCTGCTTTTGGAAACCTGGGGAGGTggaagccttggattcaagccttggctcagcacctcccagctctgac--tgtgggcctgtcttccaacatctctctgaactccagACACTCCAAAAGCAAAAGGGATCTTGGCCCAGCACAGGGCTCAGTGAAGTCTCTTAATCTCTAATTTTCTGCAGCTGAGACCTCCTACAAGCTGGAAGAATGATTGCAGATCTGACATCCTTCTCAG-GAAAAATGCAGTGTTTGTTCTCCCTGCATTCCTAACGGGAGCATAAATTCCT-GGGGCTTGAAAGAGGGAAGGGAAGGGAACATCTAATGAGGGTGAGGTGTTTTAAAGAAGTTTCACTTGCCAAGGAATGAACTCCTGTTGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCAGTAA--------AGAGC-CTTGAACACACACTTCGGCTCACTGACTCATTCAGCCATGGCCCCATGCTCAGGTTGGGCAGT-TAGAATCCtt-tcctattgttgccataacaaatttccacaaaattggtggatgaaaacaaaacg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=1326.000000 s hg38.chr19_GL949747v2_alt 488764 3 + 729520 gtt s panTro4.chr19 59728468 3 + 63644993 gtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56640161 3 + 60714840 gtt i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47475329 3 + 50890351 gct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e papAnu2.chr19 47758785 8228 + 51301725 T e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=216097.000000 s hg38.chr19_GL949747v2_alt 488767 307 + 729520 tttt----aattatcttacagtgctgtagctca-aagtaggaagtg---catcttactgggctaaaatcaaggtgacagcaaggctgccttccctctgaggattccaggcacgaatctgcttct-cacttgtcccagcttctaaaggctccca-gttccttggctcctggtccccttcctccttcctcaaagcccacaaagactggtcaca--tctcacatggcatcactcagtgccttcttcctta-ccacacttctttctctgaatgctgctctcccttcttcctcatcttttgaaaacttggggattctattgggtt s panTro4.chr19 59728471 307 + 63644993 attt----aattatcttacacagctgtagctca-aagtatgaagcg---catgtcactgggctaaaatcaaggtgacagcaaggctgccttccctctgaaggttgcaggcgagaatctgcttct-cacttgtcccagtttctaaaggttccca-gttccttggctcctggtccccttcctccttcctcaaagcccacaaagactgatcaca--tctcacatggcatcactcagacccttcttcctta-ccacacctctttctctgaatgctgctctcccttcttccccttcttttgaaaccttggggattctattgggtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56640164 308 + 60714840 tttt----aattatcttaaagtgctgtagctca-aagtatgaagtg---catctcactgggctaaaatcaaggtgacagcaaggctgccttccctctgaagtttccaggcaagaatctgcatct-cacttgtcccagcttctaaaggctcccatgttccctggctcccggtccccttcctccttcctcaaaacccacaaaggctggtcaca--tctcacatggcatcactcagacccttcttcctta-ccacacctctttctctgaatgctgcttacccttcttcctcatcttttgaaaacttggggattctatcgggtt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47750557 317 + 51301725 ttttaaaaaaatatctcaCGGTGCTGTAGCTCAGAATTATGAAATGCGTcatctcactgggctaaaatcaaggtgacATCAAGGCTGCCTTCCCGCTGAAGGTTCCAGGCAAGAATCTTCTTCCTCACTTTTCCAAGCTCCTAGAGGCTCCCACATTCCTTGG--TCTGGTCCCCATCTTCCTTCCTCAAAGCCCACAAAGGCTGGTCACATCTCTCACATGACATGAGACAGATCATTCTTCCTCA-CCACACCTCTTTCTCTGAATGTTGTTCTgccttcttcctcatcttttaaaGCCCTTGGGATTCTATTGGAAT i papAnu2.chr19 T 8228 C 0 s chlSab2.chr6 47475332 308 + 50890351 tttt----aagtatcttacagtgctgtagctca-aaggatgaaatg---catctcacagggct-aaatcaaggtgacagcaaggctgccttccctccgaaggttccaggcaagaatctgctttc-cacatatcccagtttctagagattcccacgttccttggctcctggtccccttcctccttcttcaaaacccacaaagactggtcacg--tcacacatggcatcactcagacccttcttccttgtccacgcctctttctctgaacgttcctctgccttcttcctcatcttttaaggactttgggattatattgcgtt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=432317.000000 s hg38.chr19_GL949747v2_alt 489074 948 + 729520 caccaagatgaaaatccctcataatctcctggaaatcatccaggatacccttgttttaagttcagctgattagtaaccataattccatctgcaatcttcattcctcctttccatgt-aaaataacatattcacaagctatggaggctaggacagggaca-ttttggggtgggacagcattctcctgccttccacaAACAGTGAACAAGATGCATTTGGCCTCTGCCCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGATCTATAAATGAATGATCCATTGGGAAGCATCTGTGCATGAAATCTAttt-tttgtttgttcttttgttt--------------attgagacagagttgccctctgtcttccaggctacagtgcagtgtcacgatcttggctcactgcaacctgcttctcctggattcaagtgattctcctgcctccgcctctcgagtagctgggattacaggcaactgccaccgtgcccggctaattctttttgtatattttttgtagagaggatgtttcaccacgttggccaagcttgtctgaaactcccaacctcaagtgatccgaccgtctcagcatgccaaagtaatgggactacaggcgtgagccactgtgcccagccAGAATTCAAAATCAATAATAGATAATGCTGAGTGTATGATTTCAGGTGACAAAGAAGGTCTCACTATTCAGATATTTGTGACATTAATGAAAAACACGGATTGAACCCCTGAAAGATTGGCGGAAGGATTTTGCACACACAGCTGTCAGCCGTGAAGGCACAAAGGTGAAAACAATCTGATGTGGAAGGAAGAGGCTCTTC-CTCAAATGCTGGGAATGAGGTGGGGAGAATGACAAGACGACTGTGGAGAGACGGAGAGCACACTGGGTACACAGGAAACTAAGGAGCAACAAGGAGTGTGTGTT s panTro4.chr19 59728778 949 + 63644993 caccaagatgaaaatccatcataatctcccggaaatcatccaggatacccttgttttaagttcagctgattagcaactgtagttccatctgcaatcttcattcctcctttccatgt-aaaataacatattcacaagctatagaggctaggacagggaca-ttttggggtgggacaacattcttctgccttccacaAACAGTGAACAAGATGCATTTGGTCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAACGGGAGGGCAGAAAATGAATGCACAAGTGAACCAATAAATGAATGATCCATTGGGAAGCATTTGTGCATGAAATCTAtttgtttgtttgttcgtttgttt--------------attgagacagagtctccctctgtcttccaggctacagtgcagtgtcacaatcttggctcactgcaacctgcgtctcctggattcaagtgactctcttgcctcagcctctcgagtagctgggattacaggcaactgccaccatgcccggctaattcattttgtatattttttgtagggaggatgtttcaccatgttggccaagcttgtctgaaactcccaacctcaagtgatccaaccatctcagcatcccaaagtactgggattacaggcgtgagccactgtgcccagccAGAATTCAAAATCAATAATAGATAATGCTGAGTGTATGATTTTGGGTGACAGAGAAGGTCTCATTAATCAGATATTTGTGACATTAATGAAAAACACGGATTGAACCCCTGAAAGATTGGCGGAAGGATTTTCCACACACAGCTGTCAGCCGTGAAGGCACAAAGGTGAAAACAATCTGATGTGGAAGGAAGAGGCTCTGC-CTCAAATGCTGGGAATGAGATGGGGAGAATGACAAGACGACTGTGGAGAGACGGAGAGCACACTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56640472 946 + 60714840 caccaagatgaaaatccaccataatctcccggaaatcatccaggataccctggttttaacttcagctgattagcaaccataattccatctgcaatcttcattcctactttccatgt-aaaataacatattcacaagctatggaagctaggacaggaaca-ttttggggtgggacagcattctcctgccttccacaAACAGTGAACAAGATGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCGCAAGTGGACCAATAAATGAATGAACCATTTGGAAGCATCTGTGCATGAAATCTA----tttgtttgtttctttgttt--------------attgagacagagtctccctctgtcttccaggctacagtgtagtgtcacgatctgggctcactgcaacctgcacctcctggattcaagtgattctcctgcctcagtctctcgagtagctgggattacaggcaactgccaccacacccggctaattcttattgtatattttttgtagagaggatgtttcaccatgttgcccaagcttgtctgaaactcccaacctcaagtgatccaaccatctcagcaacccaaagtactgggattacaggcgtgagccactgtgcccagccAGAATTCAAAATCAATAATAGATAATGCTGAGTGTATAATTTTGGGTGACAGAGAAGTTCTCACTAATCAGATATTTGTGACATTAATGAAAAAGACGAATTGAACCCCTGAAAGATTGGCGGAAGGATTTTCCACACACAGCTGTCAGCCGTGACGGCACAAACGTGAAAACAATCTGATGTTGAAGGAAGAGGTTCTGCATTCAAATGCTGGGAATGAGTTGGGGAGAATGATGAGACGACTGTAGAGAGATGGAGAGCACACTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTT i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47475640 945 + 50890351 cagcaagat---aatccatcatcatctccctaatatcatccaggataccctccttttcagttcagctgattagcaaccataattccatctgcaatcttcattcctcttttccatgtaaaaatcacatattcacaaggtgtgaaggctaggacagggacatttttggggtggggtgg-attctcctgccttccacaAATAGTAAACAGGATGCATTTGGCCTGTGCTCTTGGGACACTGACGTTGCAGATGGGTAAACGAGAGGAAAGAAAACGAATGCACAAGTGGACCTATAAATGGCTGATCTATTGGGAAATATCTGTGCATAAAATCtatttatttgtttatttatttatttatttatttatttTAAttaagacagagtcttactctatcccctacactggagtgcagtgtcacgatcttggttcactgcaacctccgcctcctgggttcaagtgattctcctgcctcagcctcttgagtagcttggattacaggcacccgccaccacacctggctaattctttttgtagatttttggtagagatgatgtttcaccatgttgccc-agtctatctccaactcccagtctaaagtaatccgaccgcctcagcctcccaaagtgctgggattataggcatgagccacggcacccagtcAGAATTTAAAATAAATAATAGATAATGTTGAGTGTATGATTTCAGGTGACAGAGAAGTTCTCACTAATCACATATTTGTGATGTTATTGAAAAAAA-------------TGGAAGACTGGCGGAAAGATTTTCCAAACACAGCTATCAGCCGTGAAGGCACGAAGGTGAAAACAATCTTATGTGGAAGGAAGAGGCTCTGC-CTGAAATGCTGGGAATGAGATGGGGAGAATTACAAGACCACTGGAGAGAGA-GAAGAGCACACTGGGCACACAGGAAACTAAGGAGG-ACAAGGAGTGTGTGTT i chlSab2.chr6 C 0 T 77022 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e papAnu2.chr19 47750874 0 + 51301725 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=445046.000000 s hg38.chr19_GL949747v2_alt 490022 906 + 729520 TGACACTCACAGCCATTGGATTCACCTCGGGGTAACCAGGAATCCCTACATGATTAATA-TGACTGACATGAAAATAAAGGAGGCCCAGGGGCGTAACTGGAATCTAGGAGACCGTGGAAAAGGCAATTCCCGACCCACTGGTGAAATGTGGTGCTGATTTTGACACTAAGTGGATGAAGCAGATGGATATAAGCTATGCTTGTGAGGTAGAATCATTGGCTGGAAAGGCTTGCTGGGTTTGATTTTCCTACTTGTTTAATCCTCGCTTAATTAATTTCTTTCTGAGATTTATTCATCCTACACATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGAGACCT-ATTATAGCGTAATATACAAGTCTGTGAAcggtggctcacgcttgtaacccagcactgcaggaggccaaggcgggtggattccatgaagtcaggagttccagaccagcctggccaacatggtgaaaccctatctgtactaaaaatacaaaaattagccgagcatggtggtgcatccctgtaatcccagctcctactctggaggatgaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtggagattgcatcactgcactccagcctgggtgacacaaggagactccgtctcaaaaaataaaaataagaaaTGCATAAATATAATAAAACACACACGAATGACAAAGGCACCTGAATTCCAATCATCATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGGCAATGAGCCTAAAACCTCTTCCCTATTTGGCTTTCTGTGAGCATGAGATCACATAGAAAATGTGAAAGCCCGCTGAATCCTCCAGCACGGATCCTGGAATAGAGAAAGTG s panTro4.chr19 59729727 907 + 63644993 TGATACTCACAGCCGTTGGATTCACCTCGGGGTAACCAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCATGTGCATAACTAGAATCCAGGAGACTGTGGAAAAGGCAATTCCTACCCCACTGGGGAAATGTGGTGCTGATTTAGTCCCTAAGTGGATGAAGCAGATGGATATAAGATATGCTTGTGAGGTAGAATCATTTGCAGGGAGGGCTTGCAGGATTTGATTTTCCTAGTTGTTTAATCCTCGCTTAATTAATTTCTTTATGAGATTTATTCATCCTACACATAAACCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGGGATCT-ATTATAGCATAGTATACAAGTCTGTGAAcggtggctcacgcctgtaacccagcactgcaggaggccaaggcgggtggattccatgaagtcagaagttcgagaccagcctgaccaacacggtggaaccctatctctactaaaaatacaaaaattagccgagcatgctgttgcatccctgtaatcccagctcctactctggaggatgaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtggagattgcatcactgcactccagcctgggtgacacaaggagactccatctcaaaaaataaaaataagaaaTGCATAAATATAATAAAACACACGCGAATGACAAAGGCACCTGAATTCCAATCATCATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCGTTACGCAATCAGCCTAAAACCTCTTCCCTATTTGGCTTTCTGTGAGCATGAGATCGTATAAAAAAAGTGATAGCCCGCTGAATCCTCCAGCACAGATCCTGGAATAGAGAAAGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56641418 907 + 60714840 TGATACTCACAGCCATTGGATTCAACTCAGGGTAACTAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGAGAGGCCCAGGTGCGTAACTGGAATCTAGGAGAGTGTGGAAAAGGCAATTCCTGCCCCACTGGTGAAATGTGGTGCTGATTTAGACACTAAGTGGATGAAGCAGATGTGTATAAGATATGTTTGTGAGGTAGAATCATTGGCTGGAAAGGCTTGCTGGGTTTGATTTTCCTAGTTGTTTAATCCTGGCTTAATTAATTTCTTTCTGAGATTTATTCCTCCTACGCATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGGGACCT-ATTATAGCATAATATACAAGTCTGTGAAcggtggctcactcctgtaacccagcactgcaggaggccaaggcgggtggattccatgaagtcaggagttcgagaccagcctggccaacatggggaaaccctatctctactaaaaatacaaaaattagctgagcatggtgatgcatccctgtaatcccagctcctactctggaggatgaagcaggagaatgacttcaacccaggaggtggaggttgtagtgagtagagattgcatcactgcactccagcctgggcgacacacggagactctgtctcaaaaaataaaaataagaaaTGCATAAATATAATAAAACACACACGAATGACAAAGGCACCTGAATTCCAATCATCATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGGCAATCACCCTAAAACCTCTTCCCTATTTGGTTTTCTGTGAGCATGAGATCATATAGAAAATGTGAAAGCCCGCTGAATCCTCCGGCACAGATCCTGGAATAGAGAAAGTG i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47399563 907 + 50890351 TTACACTCACAGCCATTATATTCACCTCAGCGTAACTAGGAATCCCTACATGATTAATAGTGACTGACATGAACATAAGGGAGGCCCAGGTGCGTAACTGGAATCTAGGAGACCGTGGAAAACGCGATTCCCGCCCCACTGGTGAAACGTGGTGCTGATTTAGACACTAAATGAATGAAGGACATGGATATAAGATATGTTTGTGAGGTAGAATCATTTGCAGGGAGGACTCGCTGGGTTTGATTTTCCTAGTTGTTTAATCCTTGCTTAATTAAATTCTTTCTGAGATTTATTCCTCCTGCATGTAAATCAATACCTGGCAGAGGAGTGACAGATAGATGAGGGGTGGTGGAAATGAAGGGACCTAATTACAACATAATATACAAGGCTGTGAAcggttgctcatgcctctaacccagcactgcaggaggccaaggcaggtggattccatgaagtcacgagttcaagaccagactggccaacatggtgaaaccctatctctaataaaaatacaaatattagctgagcatggtggtgcatgcctgtaatcccagctcctactctggaggaggaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagttgagatcacatcactgcactccaacctgggtgactcaaggagactctgtctcaaagaataaaaTTAAGAAATGCATAAATATAATGTAACATACATGAATGACAATGGCACCTGGATTACCATCATCATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGGCAATCAACCTAAAACCTCTTCCCCATTT-GCTTTCTGTGAGCGTGAGATCATATAGAAAATATGAAAGCTCCCTGAACCCACCAGCACAGGTCCTGGAATAGAGGAAGTG i chlSab2.chr6 T 77022 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e papAnu2.chr19 47750874 0 + 51301725 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=983731.000000 s hg38.chr19_GL949747v2_alt 490928 1362 + 729520 CTCTGTTCATCGCAAAAAAAAACTTGCCCACTCACCCAAATCCCCCACCTCACCCCTACTTCC--AATCACCTGTGGAGATTCAGATAGACCATGGGGAGG-AAACATTAATACTCCTTGGAGTGAGTCCAGATCTTGGAATCAGAGATCAGCGACAGCACTAGCTCCTGTTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTATTGAAGCAATAGATGGTGGAGGGGGTGGTCCTTCCCCCAGCCTCTCGGGTAGAACAGCAGCCTAACATGTGTCTCCCGAGATCACAAAGAGCAGCACATTTCACACGGGCTTCAACACTATTTTCTGGCTGTTTGACATAAGAGAATCTTGCTTCGCTATTTTTAATCGTGATTTCACCTTTGTTTCCTTTCCTTGGTGAATGCAATTTGTTTGACTCAAGAATGCTGTGGATGTAGAAATCCTAAAGCACATTCGCTGTGTATCAATCCCAGTGCAGTCTTCCCAGAGAAGACTCTAAACAAATCCTGGactgcacctgggcctatgccaattcctatcactcaccgtcactccagggagacagaacacacagagaatacgttacatag-gcaggttcattactaacagataagcagtgagtgacaacagaagcctgcatttcaatgtgagccagtccctcaaggctcagaaaagctgctcgggacatatggagtcaccccatttgcagtgtaactgggggaagccagaaagcagcccagcctgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacgtcctcctccaggaagaacaggaagacagcccaggctgttctgagacattcctcctgatctcaggatgttgctatcttagtccatttttgttgctctaaaggaacacttgagcctgggtaacttctaaagaaaagagattggtttgcctcacagttctgcaggctgtactggaagcatggcaccagaatctatttctcgtgatggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgcagagaccgcagagatcacacggcaagagagagagtaagggggagagggagcgatggagcttccaagctctttttaacaaccagctctccag-gaactaacagagggggaacttgctaaccccgtctccttgggacagcattggtctgttcatgatggatccacctccatgacccaaacacctctgaagaggcccaacctcccacaatgggggtgaaatttcaatgtgaggtttgaaagggtcaaacatctcaactaaagtagttgtatcctcagcacgttctatggttactatgagagctataattgag s panTro4.chr19 59730634 1355 + 63644993 CTCTGTTCATCACCAAAAAAAA--TGCCCTCTCACCCAAATCCCC-ACATCACCCCTACTTCC--AATCACCTGTGGAGATTCAGATAGGCCATGGGGAGGTAAACA---ATACTCCTTGGTGTGAGTCCAGATCTTGGAATCAGAGGTCAGTGCCAGCACTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTATTGAAGCAATAGATGGCCGAGGGGGTGGTCCTTCCCCCAGCCTCTCGGGTAGAACAGCAGTCTAACATGTGTCTCCCGAGATCACAAAGAGTAGCACGTTTCATACGGGCTTCAGCACTATTTCCTGGCTGTTTGACATAAGAGAATTCTACTTCGCTTTTTTTA-TCTTGCTTTCACTTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTGACTCAAGAAAGCTGTGGATGTAGAAATCCTAAAGCACATTCGCTGTGTATCAATCCCAGTGCAGTCTTCCCAGAGAAGACTCTAAACACCTGCTGGactgcacctgggcctatgccaattcctatcactcaccgtcactccagggagacagaacacacagagaacacattacacag-gcaggttcattactaacagataagcagcgagtgacaacagaaacctacatttcaatgtgagcccgtccctcaaggctcagaaaagctgctcgggacatatggagtcatcccatttgcagtgtagctgggggaagccagaaagcagcccagcctgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacgtcctcctccaggaagaacaggaagacagcccaggctgttctgggacattcctcctgatctcaggacgttgctgtcttagtccatttttgttgctctaaaggaacacttgagtctgggtaacttctaaagaaaagagattggtttgcctcaccgttctgcaggctgtactggaagcacggcactggcacctatttctcgtggtggcctcaggctgctcccactctgacagaagggaaggagggtctgtctgtgcagagaccacagagatcacacagcaagagagggagcaagggg-agggggagcgatggagcttccaagctcttttgaacaaccagctctccag-gaactaatagagggggaacttgctaaccccgtctccttgggacagcattgatctgttcatgatggatccacctccatgacccaaacacctcccaagaggcccaacctcccaccctgggggtgaaatttcaatgtgaggtttgaaggggtcaaacatctcaactaaagtagttgtatcctcagcacgttctatggttactatgagagctgtaactgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56642325 1359 + 60714840 CTCTGTTCATAGCAAAAAAAAA-TTGTGCTCTCACCCAAACCCCCCACCTCAGCCCTACTTCC--AATCACCTGTGGAGATTCAGATAGACCATGGGGAGGTAAACATTAATACTCCTTGGAGTGAGTCCAGATCTTGAAATCAGAGATCAGCGCCAGCACTAGCTCCTGCTCCCCTTTCATACTAATTCACAGGAGGACAGGTGGTATTGAAGCAGTAGATGGTGGAGGGGGCGGTCCTTCCCCCAGCCTCTCGGGTGGAACAGCAGCCTAACATGTGTCTCCTGAGATCACAAAGAGTAGCACGTTTCACACGGGCTTCAACACTATATCCTGGCTGTTTGACATAAGAGAATTCTACTTCGCTTTTTTTA-TCTTGATTTCACGTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTCACTCAAGAATACTGTGGATGTAGAAATCCTAAAGCACATTCGCTATATATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGTACTGCGCCTGGGCCTATGCCAATTCCTATCACTCACCGTCACTCAAGGgagacagaacacacagagaatacattacatag-gcaggttcattactaacagataagcagtgagtgacaagagaagcctacatttcaatgtgagccagtccctgaaggctcagaaaagctgctccggagatatggagtcatcccatttgcagggtagctgggggaagccagaaagcagcccagcctgggtgttctaccctggagccacaggaagcactcagctaaagcactgcatgacatcctcctctaggaaaaacaggaagacagcccaggctcttctgggacattcctcctgatctcaggatgttgctgtcttagtccatttttgttgctataaaggaacacttgagcctgggtaacttctaaagaaaagagatttgtttgcctcacagttctgcaggctgcactggaagcatggcaccagcatctatttcctgtgacggcctcaggctgctcccactctggcagaaggggaggagggtctgtctgtgc--agaccacacagatcacacggcaagagagggagtaagtgggagggggagcgatggagcttccaagctctttttaacaaccagctctccag-gaactaacagagggggaacttgctaaccccgtctccttggaacagcattgatctgttcatgatggatccacctccatcacccaaacacctcccaagaggcccaacctcccacactgggagttaaatttcaatgtgaggtttgaaggggtcaaacatctaaactaaagtagttgcatcctcagcacattctatggttactatgagagctataactgag i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47750874 1345 + 51301725 CTATGTTCATGGC---ATAAAACTTGCCCCCTCACCCAAATCCCCCACCTCACCTCTACTTCC--TATCACATTAAGAGACACAGATAGACCGTGGGAAGGTAAAAACTAATATTCTTTG----GAGTTCAGATCTTGGACTCAGAGACCAGCATCAGCACCATCTCCTGGTCACCTTTTATACGAATTCACAGAAGGACAGGTTGTACCAAGGCAATAGATGATGGAGGGGGTTGTCCTTCCTCCGGACTCTCAGGTAGAACAGCAGCCTAATATAGGACTCCCGAGATCACAAAAAGGAGCCCGCTCTTCACGAGCTTCATCATTATTTCCTGGCTGTTTGATATATTTCAGTTCTACTTCACTGTTTTGA-TCTTGATTTCACTTT--ATGCCTTTTCTTGCCAAAAATAATGTGTTTGAGTCAAGAGGGTTGTGGCCGTAGAAATTGTAAAGCACATTCACTGAGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGTACTGCACCTGGGGCTATGCCAGTTTCTATCACTCACGGTCACTCCAGGGAGACAAAACACACAGACAATACATGACATAAGGTGGGTTCATTACTAATACATAAGCAGCAACTGACAACAGAAGCCTACATTTCAATGTGAGCCAGTCCCCCAAGGCTCAGAAAAGCTGCTCGGGACATATGGAGTCACCCCATTTGCACTGCAGCTGGGAGAACCCAGAAAGCAGCCCGGCCTGGGTTTTGTACCCTGGAGCCACAGGAAGCACTGAGCTAAAGCACTGCATGGCGTCCTCCTCTGGCACGAACAGGAAGACAGTCCA-GCCGTTCTGGGACATTCCTCCTGATCTCAGGACGttgctgtcttagtccatttttgaGGATGTGAAAGAACATTTGAGCCTGGGTAACTTCTACAGAAAACAGATTTGGTTGGTTCACGGTTCTGCAAAGTGTACAAGAGGCAGGACACCAGCATCTATTTCTGGCTGCGGCCTCAGGCTGCTCCTACTCTGGTAGAAGAGAAGG-GGGCTTCCATGTGCAGAGACCACCGAGAGCACACGGCAAGACAGGGAAAA------ACGGGGTGTGATGGAGCTTCCAAGCTCTTTTTAAGAACCGAGTCTCCAGAGTACTAATAAAGGGAGAA-TTGCTAACCCTGTCG-TGTGGGGGAACATTAATCTATTTATGatggatccacccccatgacccaaacacctcccaataGGCACCACCTCCCACACTCAGGGTTAAATTTCAGAGTGAAGTTTCGGGGGGTCAAATATCCATACGATAGCAGGTGTCTCATCCGCACATTCTGTAGTTATTACGAAAACTATAACTGAG i papAnu2.chr19 C 0 I 6650 s chlSab2.chr6 47400470 1359 + 50890351 CTCTGCTCATCGC---AAAATGCTGGCCCCCTCACCCAAATCCCCCACCTCACCCCTACTTCCAATATCACCTGTGGAGATTCAGATAGACCATGGGGAAGTAAACACTAATACTCCTTAGAGTGAGTTCAGATCTTGGAATCAGAGATCAGCACCAGCACTAGCTCCTGGTCCCCTTTCCTACTAATCCATGGAAGGACAGGTTGTTTTGAAGCAATAGATGGTGGAGGGTATTATCCTTCCCCCAGCCTCTCGTGTAGAAGAGCAACCTAATATATGACTCCCGAGATCACAAAGAGTAGCACGTTTCCAATGGGCTTCAACGCTATTTCCTGGCTGTTTGACGTAAGAGAATTCTGCTTCGCGTTTTTGA-TCTTGATTTCACTTTTCTTTCCTTTTCTTGGAGAATGTAAGTTGTTTGAGTCAAGAGTGCTGTGCATGTAGAAATCCTAAAGCACATTCACTGTGCATGAATCCGAGTTCAGTCTTCCCAGAGAAGACTCTTAACACATCCTGTactgcacctggggctgtgccaattcctatcactcaccgtcactccagggagacagaacacacagagaatatgtgacataa-gcaggttcattactaacacaaaagcagcaagtgacaactgaagggtatatttcaatgtgagccagtcccccaaggctcagaaaagctgctcaggacatatagaatcaccccatatgcagtgtatctgggggaacccgaaaatcagcccagcctggattttgtcccctggagccacaggaagcactgagctaaagcactgcatgacgtcctcctctaggaagaacaggaagacagcccaggctgttctgggacgttcctcctgatctcacgacgctaatgtcttagtccatttttgttgctataaaagaacacttgagcctgggtaacttctaaagataagcgatttatttgcctcacagttccgcaggctgtactagaagcatggcaccagcatctatttcttgtaatgacctcaggctgctcccattctggcagaagggaaggagggtctgtgtgtgcagagaccagagagatcacacggcaagagagggagcaagggg-aaggggcgcaatggagcttccaagctctgtttaacaaccagctctccag-gaactaatagagggagaacttgctaaccccgtcg-tatgggacagcattaatctattcatgatggatccacctccatgacccaaatatgtcccaatagccccaacctcccacattgggggttaaatttcaatgtgctgtttgaaggggtcaaacatctaaactaaagcagttgtatcttcagcacattctatggttactatgagagctataactgag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=1332.000000 s hg38.chr19_GL949747v2_alt 492290 2 + 729520 aa s panTro4.chr19 59731989 2 + 63644993 aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56643684 2 + 60714840 aa i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47758869 2 + 51301725 AG i papAnu2.chr19 I 6650 C 0 s chlSab2.chr6 47401829 2 + 50890351 aa i chlSab2.chr6 C 0 I 75240 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=491430.000000 s hg38.chr19_GL949747v2_alt 492292 620 + 729520 agcaggggaaagctaggtcTCCCGCCATTTGGGTGCTTGTCCTAAAGAGACGTTGTATGTGGTTACCTGCCAATCAAGAAATGCGAGACAATTCATAAAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCCTCTTCTTCCAGGTAACCCCAGACACCTACATGTTCTGATTGGGACCTCAGTGGTCAAAATCCCTTTCACCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCGACAAAAAAAGTAAGTCTCACGAAGCAGAGGCCAGAGAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCACGCGGATGTGTGTTCCTCACCAGCAGGATGGTCCCTGGCCCAAGACAGGAGCCACAGAGGCAGGACTTTCTAGAGAGAGCACCAGATTCCCTTCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTATCCTCACGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGATAGAATCAATGGGATGGGACCTCAGAGCTATTCATGGGATGGGTCCTTGAACTCAGAGAGATAGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGC s panTro4.chr19 59731991 620 + 63644993 agcaggagaaagctgggtcTCCCTCCATCTGGGTGCTTGTCCTAAAGGGGTGTTGCATGTGGTTACCTGTCAATCAAGAAATGTGAGACAATTCATAAAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCCTCTTCTTCCAGGTATCCGCAGACACCTGCACGTTCTGATTGGGACCTCAGTGGtcatcatcctcttcatcctcctcctcttctttctccttcATCGCTGGTGCTCCAACAAAAAAAGTAAGTCTCACAAAGCAGAGGCCAGAAAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAACACTCAGGTGTGTGTTCCTCACAGGTAGGATGGTCCCTGGCCCAAGGCAGCAGCCACAGAGGCAGGACTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTGTCCTCACGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTGAGCTCAGAGAGATAGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56643686 620 + 60714840 agcaggagaaagctaggtctcccgccatctgggtgcttgtcctAAAGAGACGTTGTATGTGGTTACCTGTCAATCAACAAATGCGAGACAATTCATAAAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCGTCTTCTTCCAGGTAACCCCAGACACCTGCACGTTCTGATTGGGATCTCAGTGGTCATCATCCCCTTTGCCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAAAGTAAGTCTCACGAAGCAGGGGCCAGAGAGCTCAGGGCCGTGTGGGGAAGCAAGATTGGAGCACGCGGGTGTGTGTTCCTCACTGGCAGGAAGGTCTCTGGCCCAAGGCAGGAGCCTCAGAAGCAGGACTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTATCCTCACATTCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTGAGCTCAGAGAGATTGAGTGTCTGAGTCT-GCTGTTGGCAAGTGAGGGACCTCAGGC i ponAbe2.chr19 C 0 T 16397 s papAnu2.chr19 47758871 616 + 51301725 AGCAGGAGAAAGCTGGGTCTCCCGCCATCAGGCCGCTTGT-CTAAGGAGACATTCCACATGGTTACCTGTCAATCAAGAAACGAGAGACAATCCATAAGAAGGAACTGCTATGATTAGCTTCTTATTCGTGTCTCTTCTTCCTCCAGGTATCCCCGGACACCTGCATGTTCTGATTGGGACCTCAGTGGTCATGATCCCCTTCAcca---tcttcttctttctcctgcatCGCTGGTGCTCCAACAAAAAGAGTAAGTCTTACGAAGCAGAGGCCACAGACCTCAGGGCTGAGTGGGGAAGCGGGATGGGAGCACACAGGTGTGTGTTCCTCACCGGCAGGATGGTCTCTGGCCCAAGGCaggagccacagaggcagagctttcTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTATATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGAAATTGAGAGCCATTCATGGGAAAGAGTCTTGAACTCAGAGAGATAGACTGTCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCAGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47477071 616 + 50890351 AGCAGGAGAAAGCTGGGTCTCCCGCCATCAGGCCGCTTGTCCTAAGGAGACATT-CACATGGTTACCTGTCAATCAAGAATTGAGAGACAATCCATGAAAAGGAACTGCTATGATTAGCTTCTTATTGGAGTCTCTTCTTCATCCAGGTAACCCCAGACACCTGCATGTTGTGATTGGGACCTCAGTGGTCATGATCCTCTTCACCA---TCTTCTTCTTTCTCCTGCATCGCTGGTGCTCCCACAAAAAGAGTAAGTCTCACGAAGCAAAGGCCACAGACCTCAGGGTCGTGTGGGGAAGCGGGATGGGAGCACGCAGGTGTGTGTTCCTCACCGGCAGGATGGTCTCTGGCCCAAGGCAGGAGCCACAGATGCAGGGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTAGGAAGCAGAATCACTGGGATGCCAATTGAGAGCCATTTATGGGAAGGGGTCTTGAACTCAGAGAGACAGAATGTCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCAGGC i chlSab2.chr6 I 75240 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=23019.000000 s hg38.chr19_GL949747v2_alt 492912 35 + 729520 ACCTATGGCCTCCCCCTGTTTGTTGGTATCTGCTT s panTro4.chr19 59732611 35 + 63644993 ACCTATGGCCTCCCCCTGTATGTTGGTATCTGCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56627909 35 + 60714840 ACCTACGGCCTCCCCCTGTTTGTTGGTATCTGCTT i ponAbe2.chr19 T 16397 I 16362 s papAnu2.chr19 47759487 35 + 51301725 ACCTACAGTCTCCCCCTGTGCGTTGGGCTCTGCAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47477687 34 + 50890351 ACCTACGGCCT-CCCCTGTGTGTTGGACTCTGCAC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=272372.000000 s hg38.chr19_GL949747v2_alt 492947 338 + 729520 ATGAAATGAGGACCCAGAAGTGCCCTCCGAGCTCTTTTGTTGACTTCCGTCTTCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGAACAGAACAGTGAACAGCGAGGTAGGTGCTCCTCGGCCCAGCCTCGTGGCTA--GTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGCACCCTCCCTCACTCAGCATTTCCCTCTCTCCAGGATTCTGATGAACAAGACCATCAGGAGGTGTCATACGCATAATTGGATCACTGTGTTTTCACACAGAGAAAAATCACTCGCCCTTCTGAGAGGCCCAAGACACCCCCAACAGATACCAGCATGTACAT s panTro4.chr19 59732646 338 + 63644993 ATGAAATGAGGACCCAGAAGTGCCCTCCGAGCTGTTTTGTTGACTTCTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGAACAGAACAGTGAACAGGGAGGTAGGTGCTCCTCGGCCCAGCCTCGTGGCTA--GTGTTATTCCCAAAGAGTCCTGGAAAACGTGAGCACCCTCCCTCACTCAGCATTTCCCTCTCTCCAGGATTCTGATGAACAAGACCCTCAGGAGGTGACATACGCACAGTTGAATCACTGCGTTTTCACACAGAGAAAAATATCTCCCCCTTCTGAGAGGCCCAAGACACCCCCAACAGATACCAGCGTGTATAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56644306 338 + 60714840 ATGAAATGAGGACCCAGAAGTGCCCTCCGAGCTGTTTTCTTGACTTCCGTCTCCTACAGATGCTGCTGTCATGGACCAAGAGCCTGCAGGGAACACAACAGTGAAGAGGGAGGTAGGTGCTCCTTGGCCCAGCCTCATGGCTA--GTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGCACCCTCCCTCACTCAGCATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTTTCACACAGAGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCATCGTGTACAC i ponAbe2.chr19 I 16362 C 0 s papAnu2.chr19 47759522 338 + 51301725 ATGAAATGAGGACCCAGACGTGCCCTCCCAGCTGTTTTGATGACTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCTGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGGCCCAGACTCGTAGATACTGCTTTATTCCCTAATAGTCCTGAAGAATGTGAGC-CCCTCCCTCACTCAACA-TTCCCTCTCTCCAGGACTCTGAAGAAGAAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTCTCACACAGGGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAGCGTGTACAT i papAnu2.chr19 C 0 I 338 s chlSab2.chr6 47477721 339 + 50890351 ATGAAATGAGGACCCAGACGTGCCCTCCCAGCTCCTTTGATGACTTTTGTCTCCTCCAGATGCTGCTGTAATGGACCAAGAGCCTGCGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTTGGCCCAACCTCGTGGATACTGCTTTATTCCCTAATAGTCCTGAAGAATGTGAGC-CCCTCCCTCACTCAACATTTCCCTCTCTCCAGGACTCTGATGAACCAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTCTCACACAGGGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAGCGTGTACAC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=68421.000000 s hg38.chr19_GL949747v2_alt 493285 86 + 729520 AGAACTTCCAAATGCTGAGCCCAGATCCAAAGTTGTCTTCTGTCCACGAGCACCACAGTCAGGCCTTGAGGGGATCTTCTAGGGAG s panTro4.chr19 59732984 86 + 63644993 GGAACTTCCAAATGCTGAGCCCAGATCCAAAGTTGTCTCCTGCCCATGAGCACCACAGTCAGACCTTGAGGGGATCTTCTAGGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56644644 86 + 60714840 GGAACTTCCAAATGCTGAGCCCAGATCCAAAGTTGTCTCCTGCCCGTGAGCACCACAGTCTGGCCTTGAAGGGGTCCTCTAGGGAG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47760198 86 + 51301725 GGAGCTTCCAAATGCTGAGCCCAGATCGAAAGTTGTCTTCTATCCATGAGCACCACAGTCAGGCCTTGAAGGGGTCTTCTAGGGAG i papAnu2.chr19 I 338 C 0 s chlSab2.chr6 47478060 86 + 50890351 GGAACTTCCAAATGCAGAATCCAGATCGAAAGTTGTCTTCTATCCATGAGCACCACCATCAGGCCTTGCAGGGGTCTTCTATGGAG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e macFas5.chr19 55621900 30952 + 59248254 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=136817.000000 s hg38.chr19_GL949747v2_alt 493371 116 + 729520 ACAACAGCCCTGTCTCAAAACCGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACAT s panTro4.chr19 59733070 116 + 63644993 ACAACAGCCCTGTCTCTAAACTGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCGTCAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACAAATCTGAACGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56644730 113 + 60714840 ACAACAGCCCTGTGTCAAAACCAGCTTGCCAGCTCCCATGTACCGGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGCATTGCTCTTCCTCACACcacaaatct---cgt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55652852 116 + 59248254 ACAACAGTCCTGTCTCAAAACCGGCTTCACAGCTCCAATGTGCCAGCAGCAGGAATCTGAAGGTGTGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACAT i macFas5.chr19 I 30952 T 16263 s papAnu2.chr19 47760284 116 + 51301725 ACAACAGTCCTGTCTCAAAACCGGCTTCACAGCTCCAATGTACCAGCAGCTGGAATCTGAAGGTGTGAGTCTGCATCTTAGGACATCGCTCTTCCTCACAGCACGAATCTGAACGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47478146 116 + 50890351 ACAACAGCCCTGTCTCAAAACCGGCTTGACAGCTCCAATGTACCAGCAGCAGGAATCCGAAGGTGTGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACGT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=187971.000000 s hg38.chr19_GL949747v2_alt 493487 154 + 729520 GCCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGGAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCacttgacccctgcccacctctccaacctaactggcttacttcctagt-ctacctgaggctgcaatc s panTro4.chr19 59733186 154 + 63644993 GCCTCTGTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCacttgacccctgcccacctctccaacctaactggcttacttcctagt-ctacttgagactgcgatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56644843 154 + 60714840 gcctctctgttgcttacaaatgtctatagttcccactgcctgctggagagaaaacacactcctttgcttagttcacaattctctatttcacgtgacccctggccacctctccagcctaactggcttacttcctagt-ctacttgaggctgcggtc i ponAbe2.chr19 C 0 I 38355 s macFas5.chr19 55636705 154 + 59248254 GCCTCTCTCTTGCTTGCCAATGTCTAAGGTCCTCACTGCCTGCTGGAAAGAAAACACACTCCCTTGCTTAGCCCACAATTCTCCActtcacttgacccctgcccacctctccaacct-actggcttacttcctagtcctactggaggctgcagtc i macFas5.chr19 T 16263 C 0 s papAnu2.chr19 47760400 154 + 51301725 GCCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGGGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCACTTGacccctgcccacctctccaaCCT-ACTGGCTTACTTCCTAGTCCTACTGGAGGCTGCAGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47478262 154 + 50890351 GCCTCTCTCTTGCTTACAAATGTCTAACGTCCCCACTGCCTGCTGCAGAGAAAACCCACTCCTTTGCTTAGCCCACAATTCTCCActtcacttgacccctgcccacctctccaacct-actggcttacttcctagtcctgctggaggctgcagtc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=834791.000000 s hg38.chr19_GL949747v2_alt 493641 734 + 729520 acactgaggaactcacaattccaaacatacaagaggctgcctcttaacacagcacttagacacgtgctgttccacctcc--------------------cttcagactatctttcagccttctgccagcagtaaaacttataaattttt--taaataatttcaatgtagttttcccgccttcaaataaacatgtctgccctcatggtttcggtaacgagactcttttcttgcctaaggcttccggtgttatcattaccatgtccacataaccccatctgttctccattgggttctcagccctggactctgagcttctggaagcagaatggagcctgatttgtctctgAGACTCCAATTTCCATCCAAAGATACAGCACATAGGAGGCTCCAAGGATCGTGAATCACATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGCCTCATCTCCACGGGGACACATATCAACATATCATCTTTCATAATATAAATATAcagtcggtcctccatatctgtggggtttacaggtgtttattgaaccaacaataaatcaaaaatgttttcagaaaaaa-atccccgaagtttcaagaagcaaaaaactatgttgaatcgacacaaattgagtggcgtgtaggctgtgtcaggaattataagtaatcaagagatgatttcatgtatacaggaggatgtgcatgggtt s panTro4.chr19 59733340 750 + 63644993 acactgaggaactcacaattccaaacatacaagaggccccctcttgacatggcacttacccacgtactgttccacctaccctcatgctgtttcacctttcttcGGACTATTTTCCAGCCTTCTGTCAGCAGTGAAACTTATAAAATTTT--T-TGTGATTTCAATGTAGCTGTCTCCTCTTCAAATAAACATGTCTGCCCTCATGCTTTAGGTAATGTGACACTGTACTCACTGAAAGAAACCGCTGTTATCATTACCATGTCCATATAACCCCATCTGTTCTCTACTGGGTtctcacccctggactctgagcttctggaagcagggtggagcctcatttgtctctgggactcctatttccatccaaagatgcagtacataggaggtTCCAAGGATCGTGAATCAGATCAGCAAGTGATATTCTTATTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCAAGATGAAACATTTGCAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGGACACATATCAACACATCACATTTCATACTATAAATATAcagtcgctcctccatatctgtggggtttacaggtgtttattgaaccaagtataaatcaaaaata--ttcagagaaaatatccacaaagtttcaaaaagc--ataactgtgttgaacggacacaaatgaagttgtgtgtaggctgtatcaggaattataagtaatctagagatgatttcatgtatacaggaggatgtgcataggtt i panTro4.chr19 C 0 T 15887 s ponAbe2.chr19 56683352 742 + 60714840 acactgaggaactcacaattccaaacatacaagaggctccctcttaacacggcacttagacacgtgctgttccaccttacttgatgctgttccacctttcctcaggctatttttcagccttctggcatcagc-AACCTTATAAAATTTT--TTTATGATTTCAATGTAGTTCTCTCCTCTTCAAATAAACGTGTCTGCCCTCATTCTTTAGGT-----GACTCTTTTATTGCCGAAAGTTTCCGGTGTTATCATTACTATGTTCATATAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAGGGTGGAGCCTCATTTGTCTCTGAGACTCCAATTTCCTTCCAAAGATGCAGCACATAGGAGGTTCCAAGGATCGTGAATCACATGAACAAGTGATATTCTTACTCTCTGCAGACCTGCAGAGCCGGCAGAGTCATTCCACGATGAAACATTTGCAGAGTCATAGGTCTTGTTAGTCTCATCTCCACGGGGACACATATCAACACATCATCTTTCACACTATAAATATAcagtcgctcctccatatctgtggggtttacaggtgtttatggaaccaaatataaatcaaaaata--ttcagagaaaaaatccacaaagtttcaaaaagc--aaaactatgttgaatggacacaaataaagctgtgtgtgggctgtatcagga---ataagtaatcaagagatgatttcatgtatacaggaggatgtgcatgggtt i ponAbe2.chr19 I 38355 T 94031 s macFas5.chr19 55636859 748 + 59248254 acactgaggaactcacagttccaatcatacaagaggctccgtcttaacatggcacttagactcatgctgttccaccttccctcatgctgttccacctcccctcAGACTATCTTTCAGCCTTCTGTCAACAGTGAAACTTATAAATTTTTAAA-AATAATTTCAATGTAGTTGCCTCTTCTTCAAATAAACATGTCTACCCTCATGGTTTCAGTAATGTGACTCTTTTCTTGCCGAAAGTTTCCGGTGTTATCATTACTATGTCCATGTAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTTGTCTCTGGGACTCCAATTTCCGTCCAAAGATGCAGCTCATGGGAGGATCCAGGGATCGTGAATCAGATGAACAAGTGATATTCTTACCCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACATGTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGGacacatgtcaacacatcatctttcataccataaatacacagtcgctcctctagatctgtggggtttacaggtgtttattaaaccaactataaatcaaaaata--ttcagagaaaatat--acaaagtttc-aaaagc--aaaactatgttgaatggacacaaatggagtggtatgtatgctttgtcaggaattataaataatctagagatgatttcatgtatacatgagggtgtgcatgggtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47760554 748 + 51301725 ACACTGAGGAACTCACAATTCCAAACATACAAGAGGCTCCCTCTTAACACGGCACTTAGACACATGCTGTTCCACCTTCCCTCATGCTGTTCCACCTCCCCTCAGATTATCTTTCAGCCTTCTGTCAGCAGTGaaacttataaattttt--t-tatcatttcaatgtAGCTCTCTCCTCTTCAAATAAACACCTCTGCCCTCATCTTTTAGGTAATGTGACTCTTTATTCGCTGAAAGTTTCTGGTGTTATCATTACCATGTCCATGTAGCCCCATATGTTCTCCGCTGGGTTCTCACCCCTGGACTCTGAGCTTCTGTAGGCAA-GTGGAGCCTGATTTCTGTCTGGAACTCCAATTTCCATCCAACGATGCAGCGCATAGGAGGTTGCAAGGATCGTGAATCAGATGAACGAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACACCTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGGACACATGTCCACACATCATC-TTCATACTATAAATACACAGTCGCTCCTCCAGATCTGTGGGGTTTACAGGTGTTTGTTGAGCCAACtataaatcaaaaata--ttcagagaaaaaatccacaaaatttcaaaaagc--aaaactatgttGAATGGACACAAATGCAATGGTGTGTAGGCTGTGTCAggaattataagtaatctagagatgatttcatGTATACAGGAGGATGAGCATGGATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47478416 747 + 50890351 acactgaggaactcagaattccaaacatacaagaggctccctcttaacagagcacttagacacgtgctgttccaccttccctcatgttgttccacctcccctcAGACTATCTTTCAGCCCT-TGTCAGCAGTGAAACTTATAAATTTTT--T-TATCATTTCAACGTAGCTCTCTCCTCTTCAAATAAACACATCTGCCCTCATCCTTTAGGTAATGTGACTCTTTATTCGCCGAAAGTTTCCGGTGTTATCATTACTATGTCCGTATAGCCCCATATGCTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTTGTCTCTGGGACTCCAATTTCCATCCAACGATGCAGCACATAGGAGGTTGCAAGGATCGTGAATGAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCCTTCCAAGATGAAACATCTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGGACACATGTCCACACATCATC-TTCATACCATAAATACAcagtcgctcctccagacctgtggggtttacaggtgtttattgaaccaactataaaccaaaaata--ttcagggaaaaaatccacaaagttccaaaaagc--aaaactacgttgaatggacacaaatggaatggtatgtaggctgtgtcaggaattataagtaatctagagatgatttcatgtagacaggaggatgaggatggatt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=9559.000000 s hg38.chr19_GL949747v2_alt 494375 8 + 729520 ctatgcaa s panTro4.chr19 59718203 8 + 63644993 ctatgcaa i panTro4.chr19 T 15887 C 0 s ponAbe2.chr19 56590063 8 + 60714840 atatgcaa i ponAbe2.chr19 T 94031 C 0 s macFas5.chr19 55637607 8 + 59248254 atatgcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47761302 8 + 51301725 ATATGCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47479163 8 + 50890351 atatgcaa i chlSab2.chr6 C 0 T 75230 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=5510.000000 s hg38.chr19_GL949747v2_alt 494383 15 + 729520 ttactatgcta--------tttt s panTro4.chr19 59718211 19 + 63644993 ttgctatgctattt----ttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590071 23 + 60714840 ttgctaggctttttgttgttgtt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55637615 15 + 59248254 ttgctatgcct--------tttt i macFas5.chr19 C 0 I 27 s papAnu2.chr19 47761310 15 + 51301725 ACCCTGTGCCA--------TTTT i papAnu2.chr19 C 0 T 35972 s chlSab2.chr6 47403941 15 + 50890351 ttgctatgccg--------tttt i chlSab2.chr6 T 75230 I 27 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=494762.000000 s hg38.chr19_GL949747v2_alt 494398 428 + 729520 ttttttttgagacagtctcactctctcacccaggctggagtgcagtggcatgatctcagctcactgcaacctccgcctcccaggttcaagcgattgtcttccctcagcctccccagtagcctcccctaggattacaggcacgtgccaccatgcacagataaa-tttttttgtgtgtgtatttttagtagagatggggtttcagaatgttggaccagctggtcttgaactcctgacctcgtgatctacccaactcagcctcccaaagtgctgggattacaggcgtgagccacggtgcccagcttcgctatgccatttcatgcaaggggcttgagcatctgcagattttggtatctgaatggggatcctggaaccaatcacccaggaatagtgaaggaccacAGTATATAATTTTTATTTGTCAATCTTAA s panTro4.chr19 59718230 429 + 63644993 ttttttttgagacagtctcactctctcacccaggctggagtgcagtggcgcgatctcagctcactgcaacctccgcctcccaggttcgagcgaatctcttccctcagcctccccagtagcctcccctaggattacaggcacgtgccaccatgcacagataaattttttttttttttgtatttttaggagagatggggtttcagaatgttggatgggctggtcttgaactcctgaccttgtgatctacccaactcagcctcccaaagtgctgggattacaggcatgagccacggtgcccagcttcactatgccatttcatgcaagaggcttgagcatctgcagattttggtatctgaatggggatcctggaaccaatcacccaggagtagtgaaggaccacGGTATATAATTTTTATTTGTCAATCTTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590094 423 + 60714840 gttgttttgagacagtctcagtctctcacccaggctggagtgcagtggcgcgatctcagctcactgcagcctccccctcccaggttcaagtgattctcttgcctcagcctccccagtagcctcccctaggattacaggcatgtgccaccatgcacagataaattttttttat-----tatttttagtagagatgggctttcagaatattggaccggctggtcttgaactcctgaccttgtgatctacccaactcagcctcccaaagtgctgggattccaggcgtgagccagggcgcccagcttcactatgccatttcatgcaagaggcttgagcatctgcagattttgatatctgaatggggatcctggaaccaatcacccaggaatagtgaaggaccactgTATATAATTTTTTTTTGT-AATCTTAA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55637657 419 + 59248254 -ttgttttTcgg-agtctcactctctcacccaggctggagtgcagtggcacgatctcagctcactgcaacttctgcctcccaggttcaagtgattctcttgcctcagcctccccagtag------ctaggattacaggcacgtgccaccatgcacagataaattttttttcg--ttgtatttttagcagagactgggtttcactatgttgagcaggctgttctcgaactcctgatcgcatgatccacccaactcagcctcccaaagtgttggaattacaggcgcgagccaccacgcccagcttcactgtgccatttcatgcaagaggcttgagcatctgcagattttggcatctgaatggggatcctggaaccaatcacccaggaatagtgaaggactactgtatataatttttatttgccaattttaa i macFas5.chr19 I 27 I 314 s papAnu2.chr19 47725353 419 + 51301725 -ttgtttttcgg-agtctcactctctcacccaggctggagtgcagtggcgcgatctcagctcactgcaacttccgcctcccaggttcaagtgatcctcttgcctcagcctccccggtag------ctaggattacaggcatgtgccaccatgcacagataatttttttttct--ttgtatttttagcagagactgggtttcactatgttgagcaggctgttctcgaactcctgatcgcatgatccacccaactcagcctcccaaagtgttgaaattacaggcacgagccaccacgcccagcttcacTGTGCCATTTCATGCAAGAggcttgagcatctgcagattttggcaTCTGAatggggatcctggaaccaatcacCCAGGAATAGTGAAGGACGACCgtatataacttttatttgccaatttaaa i papAnu2.chr19 T 35972 I 315 s chlSab2.chr6 47403983 419 + 50890351 -tcatttttcgg-agtctcactctctcacccaggctggagtgcagtggtgcaatctcagctcactgcaacttccaccccccaggttcaagtgattctcttgcctcagcctccctggtag------ctaggattacaggaacgtgccaccatgcgcagataaattttttttct--ttgtatttttagtagagactgggtttcactatgttgagcaagctgttctcgaactcctgaccgcatgatccacccaactcagcctcccaaagtgttgggattacaggcgcaagacaccgcgcccagcttcactgtgccatttcatgcaagaggcttgagcatctgcagattttggcatctgaatggggatcctggaaccaatcacccaggaatagtgaaggacgactgTATATAATTTTTATTTGCCAATTTTAA i chlSab2.chr6 I 27 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=20745.000000 s hg38.chr19_GL949747v2_alt 494826 15 + 729520 AAATAAAGCATAAAA s panTro4.chr19 59718659 15 + 63644993 AAATAAAGCATAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590517 15 + 60714840 AAATAAAGCATAAAA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55638390 15 + 59248254 aaataaaGCATAAAA i macFas5.chr19 I 314 C 0 s papAnu2.chr19 47726087 15 + 51301725 aaataaagcataaaa i papAnu2.chr19 I 315 C 0 s chlSab2.chr6 47404402 15 + 50890351 AAATAAAGCATAAAA i chlSab2.chr6 C 0 I 325 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=5938.000000 s hg38.chr19_GL949747v2_alt 494841 10 + 729520 AGTTTACAAC s panTro4.chr19 59718674 10 + 63644993 AATTTACAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590532 10 + 60714840 AAAGTACAAC i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55638405 10 + 59248254 AATGTATAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47726102 10 + 51301725 aatgtataac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e chlSab2.chr6 47404417 325 + 50890351 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=561093.000000 s hg38.chr19_GL949747v2_alt 494851 460 + 729520 AACAAGATAAAAAATAAGAAGTGTTTTtatagtgtgaggataagtttagatttattttttcctacgtgtaaccctatggtcctgtgttatttattgagaaaatattctattccaccttaaactacatggcagcctttgtcaactatga----agggactgtgtatccacagatgtattttagacacagttttctgcccagtggttctctgtatcccctctcatgaggatgctgcatttcatataaacttatagaaccccttaaaatttggtaacctgagttctctgatttgttattATAGGTTATTTAGtttgc----------ttttttttttctttcttgagacagactcttcctctgtcacccaagctggagttcagtggcttgagctcagctcactgcagcctccgcctcccaggttcaagcaattctcgtgcct----cagGTTTAGTACTAGAAACTC-ATCAGGAAAATTAG s panTro4.chr19 59718684 467 + 63644993 AACAAGATAAAAAATAAGAAGCGTTTTTAAAgtgtgaggataagtttagatttattttttcctacgtgtaaccctatggtcctgtgttatttgttgagaaaatattctattccaccttaaactacatggcagcctttgtcaactataa----agggactgtgtatccacagatgtattttagacacacttttctgcccagtggttctctgtatcccctctcatgaggatgctgcattttatataaacttatagaaccccttaaaatttggtaacctcagtcctctgatttgttattATAGGTTATTTAGtttgc----ttttttttttttttttttttcttgagacacactcttcctctgtcacccaagctggagttcagtggctcgagctcagctcaatgcaacctccgcctcccaggttcaagcagttctcgtgcct----cTGGTTTAGTACTAGAAACTCAAGCAGGAAAATTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590542 461 + 60714840 AAGAAGAT-AAAAATAAGGAGTGTTTTtatagtgtgaggataagtttagatttattttttcctacgtgtaaccctatggtcctgtgttattttttgagaaaatattctattccaccttcaactacatggcagcctttgtcaactataa----agggactgtgtatccacagatgtattttagacacagttttctgtccagtggttctctgtatcccctctcatgaggatgctgcactttatgtaaccttatagaaccccttaaaatttggtaacctgagtcctctgatttgttattATAGGTTATTTAGtttgc---------tttttttttttttttcttgagacagactcttcctctgtcacccaagctggagttcagttgctcgagctcagctcactgcaacctccgcctcccaggttcaagccattctcgtgcct----cTGGTTTAGTACTAGAAACTCAAACAGGAAAATTAG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55638415 470 + 59248254 AACAAGATAAAATATAAGAAGTGTTTTtataatgtgaggataagttcagatttattttttcctacttgtaaccctgtggtcctgtgttatttgttgagaaaatattctattccaccttaaaccacatggcagcctttgtcaactataa----aggagctgtgtgtccacggatgtattttagacacaattttctgccccgtggttctctgtatcccctctcatgaggatgctgtactttatataaccttggagaaccccttaaaatgtggtaacctgagtcctctg-tttgttgttATAGGTTATTTAGTTTCCttttttttttttttttctttctttcttgagacagactcttcctctgtcacccaagctggagttcagtggtacgagctcagctcactgcaacctccgcctcccagattcaagcacttcttgtgtcA----CTGGTTTAGTACAAGAAACTCAAGCAGGAAAATTAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47726112 474 + 51301725 aacaagataaaaaataagaagtgttTTTATAATGTAAGGATaagttcagatttattttttcctacttgTAACCCTGTGGTCCTGTGTTATTTGTTGAGAAAATATTCTATTCCACCTTAAACCACATGGCAGCCTTTGTCAACTATAA----AGTTGCTGTGTATCCACGGATGTATTTTAGACACAATTTTCTGCCCAGTGGTTCTCTGTATCCCCTCTCATGAGGATGTTGTACTTTATATAACCTTGGAGAACCCCTTAAAATGTGGTAACCTGAGTCCTCTG-TTTGTTGTTataggttattttttttctttttttttttttttttttttctttcttgagacagactcttcctctgtcacccaagctggagttcagtggcacgagctcagctcactgcaacctccgcctcccagattcaagcactTCTTGTGCCACTTTCTTGTTTAGTACAAGAAACTCAAGCAGGAAAATTAG i papAnu2.chr19 C 0 I 29019 s chlSab2.chr6 47404742 473 + 50890351 AACAAGATAAAAAATAAGAAGTGTTTTTATAATGTGAGGATAAGTTCAGATTTCTTTTTTCCTACTTGTAACCCTGTGGTCCTGTGTTATTTGTTGAGAAAATATTCTATTCCACCTTAAACCACATGGTAGCCTGTGTCAACTATAAATTTAGGAGCTGTATATCCACGGATGTATTTTAGACACAGTTTTCTGCCCAGTGGTTCTCTGTATCCCCTCTCATGAGGATGCTGTACTTTATATAACCTTAGAGAACCCCTTAAAATGTGGTAACCTGAGTCCTCTG-TTTGTTGTTATAGGTTATTTAGTttcctttttttttttttttt-ttcctttcttgagacagactcttcctctgtcacccaagttggatttcagtggtacgagctcagctcactgcaacctccacctcccagattcaagcacttctcgtgccA----CTGGTTTAGTACAAGAAACTCAAGTAGGAAAATTAG i chlSab2.chr6 I 325 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=9485.000000 s hg38.chr19_GL949747v2_alt 495311 11 + 729520 AATGGCTTTTT s panTro4.chr19 59719151 11 + 63644993 AATGGCTTTTT i panTro4.chr19 C 0 I 15960 s ponAbe2.chr19 56591003 11 + 60714840 AATGGCTTTTT i ponAbe2.chr19 C 0 I 94109 s macFas5.chr19 55638885 11 + 59248254 AATGACTTTTT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47405215 11 + 50890351 AATGACTTTTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e papAnu2.chr19 47726586 29019 + 51301725 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=1000.000000 s hg38.chr19_GL949747v2_alt 495322 1 + 729520 G s panTro4.chr19 59735122 1 + 63644993 G i panTro4.chr19 I 15960 C 0 s ponAbe2.chr19 56685123 1 + 60714840 G i ponAbe2.chr19 I 94109 C 0 s macFas5.chr19 55638896 1 + 59248254 G i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47405226 1 + 50890351 G i chlSab2.chr6 C 0 I 74976 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e papAnu2.chr19 47726586 29019 + 51301725 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=30633.000000 s hg38.chr19_GL949747v2_alt 495323 50 + 729520 TCACAATTACTCTGATAATGTTAAT------------------------------------AATACCTCTTAGATATTTTGCACAT s panTro4.chr19 59735123 50 + 63644993 TCACAATGACTCTGAAAACATTAAT------------------------------------AATACCTATTAGATATTTTGCATAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685124 50 + 60714840 TCACAATTACTCTTAAAACCTTAAT------------------------------------AATACCTATTAGATATTTTGCATAT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55638897 86 + 59248254 TCACAATTGTTCTGATAATGTTAATAATACTTgagcgagactccgtctcaaaaaaaaaaaaaaTACTTGTTAGATATTTTGCATAT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47480203 50 + 50890351 TCACAATTGCCCTGACAACGTTCAT------------------------------------AATACCTATTAGATATTTTGCATAT i chlSab2.chr6 I 74976 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e papAnu2.chr19 47726586 29019 + 51301725 I e rheMac3.chr19 60531863 10348 + 64156825 T a score=4940.000000 s hg38.chr19_GL949747v2_alt 495373 4 + 729520 TACA s panTro4.chr19 59735173 4 + 63644993 TACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685174 4 + 60714840 TACA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55638983 4 + 59248254 TACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47755605 4 + 51301725 tata i papAnu2.chr19 I 29019 C 0 s chlSab2.chr6 47480253 4 + 50890351 TACA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e rheMac3.chr19 60531863 10348 + 64156825 T a score=42689.000000 s hg38.chr19_GL949747v2_alt 495377 37 + 729520 CATGAAGAAAAGTTTGAATCTCAGATAAAAACAA---AAA s panTro4.chr19 59735177 40 + 63644993 CAGGAAGAAGAGTTTGAATCTCAGATAAAAACAATAAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685178 40 + 60714840 CAGGAAGAAGAGTTTGAATCTCAGATAAAAACAATAAAAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60521515 37 + 64156825 CATGGAGAAGAGTTTGAATCTCAGAAGAAAACAACAA--- i rheMac3.chr19 T 10348 I 3 s macFas5.chr19 55638987 34 + 59248254 CAT---GAAGAGTTTGAATCTCAGATAAAAACAACAA--- i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47755609 36 + 51301725 cacggagaagag-ttgaaacacagataaaaacaacaa--- i papAnu2.chr19 C 0 I 6986 s chlSab2.chr6 47480257 37 + 50890351 CACGAAGAAGAGTTTGAAACACAGATAAAAACGACAA--- i chlSab2.chr6 C 0 I 3 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C a score=381891.000000 s hg38.chr19_GL949747v2_alt 495414 257 + 729520 TACATCAAAAGTCTTTAATGTAAGCACAGAATTCAATCACCTCATGTGTGAGAGGTTGGATCTGAGACGTCTTTTGAGTCTGGTCATAGTGAAGGATGCAAGGTGGCAATTGTAGTCACAACAATTTCCAGGAAGCCATGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAACATGTAAACTGCATGGGCAGGGCGCCAAATAACAT s panTro4.chr19 59735217 256 + 63644993 TACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGGCATCTCGTGTTCCAGAGGTTGGATCTGAGACGTGTTTTGAGT-TCGTCATAGTGAAGGACACTAGGTGTCAATTCTAGTGAGAACAATTTCCAGGAAGCCGTGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAACAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAACATGTAAACTGCATGGGCAGAGCGCCAAATAACAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685218 256 + 60714840 TACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGGCATCTCGTGTTCGGGAGGTTGGATCTGAGACGTGTTTTGAGT-TGGTCATAGTGAAGGACACTAGGTGTCAATTCTAGTGACAACAATTTCCAGGAAGCCATGTTCTGCTCTTGAGCGAGCACCCACTGGGCCTCGTGCAAGGTAGAAAGAGCCTGTGTACGTCACCCTCCCATGATGTGGTCAGCATGTAAACTGTATGGGCAGGGCGCCAAATAACAT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60521555 251 + 64156825 TACGTCAAAAGTCTTTCATGTCAGCACAAAATTCAGTCATCTCCTGTATGAGAGATTGGATCTGAGACGTGTTTTGAGT-TGGCAATAGTGAAGGATGCAAGGTGTCAATTCTAGTCGGAACAATTTCCAGGAAGCCATGTTCCACTCTTGAGCAAACAACCACTGGGCCTCATGCAAGGCAAAAAGAGCCTGTGTACGTCATCCTCTCATGATGTGGTCAGCATGTCAACTGCAT-----GAGCCCCTCACAACAT i rheMac3.chr19 I 3 C 0 s macFas5.chr19 55639024 245 + 59248254 TACATCAAAAGTCTTTAATGT-AACCCAGAATTCAATCATCTTGTGTTCGA-AGATTGGATCTGAGACGTGTTTTGAGC-TGGTCATAGTGAATGACGCAAGGTG---------GTCACAACAATTTCCAGGAAGCCATTTTCTGCTCTTGGCTGGAGGCCCGCTGGGCATCATGTAACGTAGAAACAGCCTGCATACGTCACCCTCCCATGATGTGGTCGGCATGTCAACTGCATGGGCAGAGCGCCACATAACAT i macFas5.chr19 I 3 T 17845 s papAnu2.chr19 47762631 256 + 51301725 TACATGAAAAATCTTTCACGTCAGCACAGATTTTAGTCACCTCATGTCCGGGAGGTTGGATCTGAGACGTGTTTTGAGC-TGGTCATAGTGAAGGACGCAAGGTGTCAGTTCTAGTGAGAACAATTTCCAGGAAGCCATTTTCCACTCTTGAGTGAGCACCCGCTGCACCTCATGCAAGGTAGGAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAGCACGTCAACTGCATGGGCAGGGCCCCAGATAACAT i papAnu2.chr19 I 6986 C 0 s chlSab2.chr6 47480297 256 + 50890351 TACATGAAAAGTCTTTCACGTCAGCACAGACTTTAGTCACCTCGTGTCCGGGAGGTTGGATCTGAGATGTGTTTTGAGC-TGGTCATAGTGAAGGACGCAAGGTGTCAGTTCTAGTGAGAACAATTTCCAGGAAGCCATTTTCCCCTCTTGAGTGAGCACCCGCTGCACCTCATGCAAGGTAGGAAGAGCCAGCGTACGTCACCCTCCCATGATGTGGTCAGCACGTCAACTGCATGGGCAGGGCGCCAGATAACAT i chlSab2.chr6 I 3 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C a score=221184.000000 s hg38.chr19_GL949747v2_alt 495671 129 + 729520 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCTCCTGTCTGCACCGGCAGCACCATGTCGCTCACTGTCGTCAGCATGGCGTGCGTTGGTGAGTCCTGGAAGGGAATAGAGGGAGGGAGAG-TGGGGA s panTro4.chr19 59735473 129 + 63644993 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTATCTGCACTGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATAGAGGGAGGGAGTG-TGGGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685474 130 + 60714840 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATCGAGGGAGGGAGCACTGGGGA i ponAbe2.chr19 C 0 T 54709 s rheMac3.chr19 60521806 129 + 64156825 CCTGTGTGCTGCTGAGCTGAGCTGGGGCACGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCATCAGCATGGCATGTGTTGGTGAGTCCCAGAAGGGAATCGAGGGAGGGAGCACTGGGG- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55621424 129 + 59248254 CCTGTGTGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCATCAGCATGGCATGTGTTGGTGAGTCCCAGAAGGGAATCGAGGGAGGGAGCACTGGGG- i macFas5.chr19 T 17845 C 0 s papAnu2.chr19 47762887 129 + 51301725 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCACTCATGGTCGTCAGCCTGGCGTGTGTTGGTGAGTCCCGGAAGGGAATCGACGGAGGAAGCGCTGGgg- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47480553 123 + 50890351 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACTGGCAGCACCATGTCGCTCATGGTCGTCAGCGTGGCGTGTGTTGGTGAGTCCCGGAAGGGAATTGGCGGAGGAAGCG------- i chlSab2.chr6 C 0 I 2 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C a score=10354.000000 s hg38.chr19_GL949747v2_alt 495800 10 + 729520 TGGAGATCTC s panTro4.chr19 59735602 10 + 63644993 TGGAGATCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630895 10 + 60714840 TCGAGATCTG i ponAbe2.chr19 T 54709 C 0 s rheMac3.chr19 60521935 10 + 64156825 TGGATATCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55621553 10 + 59248254 TGGATATCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47763016 10 + 51301725 tggagatctg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236864 0 - 106955855 C e chlSab2.chr6 47480676 2 + 50890351 I a score=9601.000000 s hg38.chr19_GL949747v2_alt 495810 6 + 729520 GGCCTA s panTro4.chr19 59735612 6 + 63644993 GGCCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630905 6 + 60714840 GGCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236864 6 - 106955855 GGCCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60521945 6 + 64156825 GGCCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55621563 6 + 59248254 GGCCTG i macFas5.chr19 C 0 I 17703 s papAnu2.chr19 47763026 6 + 51301725 ggcctg i papAnu2.chr19 C 0 I 19 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e chlSab2.chr6 47480676 2 + 50890351 I a score=58381.000000 s hg38.chr19_GL949747v2_alt 495816 78 + 729520 GAGGTAAAGATATGGGCCTGGA-GTGGAGATATGGGCCTGGAG-TGGAGATATGGGCCTGGGTGTGGAGATATGGGCCTG s panTro4.chr19 59735618 78 + 63644993 GAGGTGGATATCtgggcctgga-gtggaaatatgggcctagga-tggagatatgggcctgggtgtggagatatgggactg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630911 78 + 60714840 GAGGTGGAGATATAGGCCTGGAGGTGGACTGATGGGCCTGGAG-TGGAGATCTAGGCCTGGA-GTGGAGATCTGGGCCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236870 78 - 106955855 GAACTGTAGATATGGGCCTAGA-GTGGAGATGTGGGCCTGGAACTGTAGATATGGGCCTGGA-GTGGAGATATGGGCCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60521951 47 + 64156825 GAGGTAAAGATATGGGCCTGAG-GTGGAGATACGAGCCTGGAG-TGGAG------------------------------- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47763051 47 + 51301725 GAGGTTGAGttatgggcctgga-gtggagatatgatCCTGGAG-TGTag------------------------------- i papAnu2.chr19 I 19 C 0 s chlSab2.chr6 47480678 58 + 50890351 GGGGTGGAGATCTGGGCCTGGA-GTGGGGATATGGGCCTGGGG-TGGAGATATGGGCCTG-------------------- i chlSab2.chr6 I 2 I 93 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e macFas5.chr19 55621569 17703 + 59248254 I a score=8298.000000 s hg38.chr19_GL949747v2_alt 495894 18 + 729520 GAGGTGTAAATATGGGCC s panTro4.chr19 59735696 17 + 63644993 gag-tggagatatgggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630989 17 + 60714840 GAG-TGGACATCTGGGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236948 18 - 106955855 GAACTGTAGATATGGGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60521998 9 + 64156825 ---------ATATGGGCC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47763098 9 + 51301725 ---------atctgggcc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e chlSab2.chr6 47480736 93 + 50890351 I e macFas5.chr19 55621569 17703 + 59248254 I a score=15447.000000 s hg38.chr19_GL949747v2_alt 495912 8 + 729520 TGGAGTGG s panTro4.chr19 59735713 8 + 63644993 tagagtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631006 8 + 60714840 TGGAGTGG i ponAbe2.chr19 C 0 I 54612 s nomLeu3.chr10 103236966 8 - 106955855 TGGAGTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522007 8 + 64156825 TGGAGTGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47763107 8 + 51301725 tggagtgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47480829 8 + 50890351 TGGAGTGG i chlSab2.chr6 I 93 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e macFas5.chr19 55621569 17703 + 59248254 I a score=22274.000000 s hg38.chr19_GL949747v2_alt 495920 17 + 729520 AGATATGGGCCTGGAGG s panTro4.chr19 59735721 17 + 63644993 agatatgggcttggggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685626 17 + 60714840 AGATATGGGCCTAGAGG i ponAbe2.chr19 I 54612 T 54614 s nomLeu3.chr10 103236974 16 - 106955855 AGATATGGGCCTGGAA- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522015 17 + 64156825 AGATATAGGCCTGGAGT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47763115 17 + 51301725 agatctgggcctggagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47480837 17 + 50890351 AGATACGGGTCTAGAGT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e macFas5.chr19 55621569 17703 + 59248254 I a score=-882.000000 s hg38.chr19_GL949747v2_alt 495937 18 + 729520 GGAGATATGGGCCTGGGT--------------------------------------------------------- s panTro4.chr19 59735738 17 + 63644993 ggagatctgggcctggg---------------------------------------------------------- i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47763132 55 + 51301725 ggagatatgatCGTGGA-GTGCAGATATGGGtctggagtggagata-------------------tgggcctggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47480854 74 + 50890351 GGAGATATGGGCCTGGG-CTGGAGATCTGGGCCTGGAGTGGAGATAGGATCCTGGAGTGGAGATCTGTTCCTGGA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e ponAbe2.chr19 56685643 54614 + 60714840 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103236990 0 - 106955855 C e macFas5.chr19 55621569 17703 + 59248254 I e rheMac3.chr19 60522032 0 + 64156825 C a score=23670.000000 s hg38.chr19_GL949747v2_alt 495955 39 + 729520 GTGGAGATATGGGCCTGGAG-T---------------------------------------------------------------------GGAGATACGGGCCTGGAG s panTro4.chr19 59735755 40 + 63644993 gtggagatatgggcctggaggt---------------------------------------------------------------------ggagttACTGGCCTTCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631029 39 + 60714840 GTAGAGTTACGGGCCTGCAG-T---------------------------------------------------------------------AGAGATATGGGCCTGGAG i ponAbe2.chr19 T 54614 I 54575 s nomLeu3.chr10 103236990 40 - 106955855 CTGTAGATATGGGCCTGGAACT---------------------------------------------------------------------GTAGATATGGGCTTAGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522032 18 + 64156825 -------------------------------------------------------------------------------------------GGAGATATGGGCCTGGGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47763187 108 + 51301725 gtggagatatgggcctggag-gGAAGATATGAACCTAGAGGGGAGATATGGGTTTGGAGTGGAGCCTGGAGAGCAGATTTGAGCCTGGAGaggagatatgggcctgggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47480928 39 + 50890351 GTAGAGATATGGGCCTGGAG-T---------------------------------------------------------------------GGAGATATGGGTCTGGAG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e macFas5.chr19 55621569 17703 + 59248254 I a score=239738.000000 s hg38.chr19_GL949747v2_alt 495994 199 + 729520 TGGAGATATGGGCCTGG-AGTGGAGATATGGGCCTGCA------------------GGT-GGAGATCTGGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGTCTGATG-TGGAGATATGGGCCTGG-------------------AGTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTAGAGGGGAGATCTGGGCCTGGA-G-TGGAGATATGGGTCTGATGTGGAGATA s panTro4.chr19 59735795 217 + 63644993 TAGAGATATGGGCCTGG-TGTGGAGATATGGGCCTGGATTGGAGATATGGGCCTAGGGT-GGAGATCTGAGCCTGGAGTGGAGACATGGGCCTGGATTGGAGATATGGGCTTACGG-TGGAGATCTTGGCCTGG-------------------ATTGGCGATATGGGCCTGGATTGGCGATATGGGCCTAGGGTGGAAATATCGGCCTGGA-G-TGGAGATATGGGCCTGGAGTGGAGATA i panTro4.chr19 C 0 I 31311 s ponAbe2.chr19 56685643 199 + 60714840 TGGAGTTATGGGCCTGGAAGTGGAGTTATGGGCCTGAA-------------------GT-GGAGATCTGGGCCTGGAGTGGAGATATGATCCTGGAGTGGAGATATGGGCCTGGGG-TGGAGATACAGGCCTGG-------------------AGCAGAGATACAAGCCTTGAGTGGAGATATGGGCCTGGAGTTGAGAGAGGAGCCTGGA-G-TGGAGTTATGGGCCTGGAGTGGAGACA i ponAbe2.chr19 I 54575 C 0 s nomLeu3.chr10 103237030 201 - 106955855 TGTAGATGTGGGCCTGG-AGTGGAGATATGGGCCTGGA------------------ACT-ATAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGG-------------------AGTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGACCTGGA-ACTGTAGATATGGGCCTGGAGTGGAGATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522050 182 + 64156825 TGGAGATATGAGCCTGG-AGTGGAGACATGGGCCTGGA-------------------GCTTTAGATATGGGCCTGGAATGGAGATATGGGCCTGGAG------------------A-TAGAGATATGGGCCTGG-------------------AGTGGAGATACTGGCTTGGAATGCAAGTATGGGCCTGGAATGAAGATACGGGCCTGGAGG-TGGAGATATGGGCCTAGAGTGTAGATA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47763295 217 + 51301725 tggagataGGAGCCTGG-AGGGGAGATATGGGTTTGGA-------------------GC-AGAAACATGGGCCTGGGGAGGAGATCCGGGCCTGGAGTGGACTTAGGAGTCTGGAG-TGGAGATATGGTCCTGGGGTGGAGATAGGATCCTGCAGTGGAGATATGAGCATGGAGAGGAGATATGGGCCTGAGGTGGAGATAAGGGCatgga-g-tggagatatgggcctgggttGGAGATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47480967 198 + 50890351 TGGAGACATGGGTCTGG-AGTGGAGATATGGTTCTGGA-------------------GA-GGAGATATGAGCCTGGAGAGGAGATATGAGCCTGGGGTGGAGATATGGGTCTGGAG-TGCAGATATGGGCCTGG-------------------AGTGGAGATATGGGTCTGGAGAAGAGATATGAGCCTGGAGAGGAGATATGGGCCTGGG-G-TTGAGATATGGGTCTGGAGTGGAGATA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e macFas5.chr19 55621569 17703 + 59248254 I a score=104268.000000 s hg38.chr19_GL949747v2_alt 496193 87 + 729520 TGGGCCTGGAG-TGGAGATATGGGTCTGATGTGGAGATATGGGCCTGGAG-TGGAGATAGGGGCCTGGAGTGGAGATATGGGCCTGGA-G s panTro4.chr19 59767323 87 + 63644993 TGGGCCTGGAG-TAGAGACATCAGCCTGGAGTGGAGATATGGGCCTGGAG-TGGAGATAGGGGCCTGGAGTGGAGATCTGGGCCTGTT-G i panTro4.chr19 I 31311 C 0 s ponAbe2.chr19 56685842 87 + 60714840 TCAGCCTGGAG-AGGAGATATGGGCCTGGAATGGAGATTCAGACCTGAAG-TGGAGATCTGGGCCTAGAGCGGAGATCTGGGCCTGTT-G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237231 90 - 106955855 TGGGCCTGGAACTGTAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGGAGCGGAGATCTGGGCCTGCAGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522232 69 + 64156825 GGGGCCTGGAA-C------------------TGTAGATATGGGCCTGGAG-TGGAGATATGGGTCTGGAGTGGAGATATGGGCCTGGA-G i rheMac3.chr19 C 0 I 12 s papAnu2.chr19 47763512 87 + 51301725 GGAGCTTGGAA-AGGAGATATGGGTTTGGAGTGGAGATATGGGTCTGGAG-TGCAGATAtgagcctggagtggagatatgggcctgga-g i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47481165 87 + 50890351 TGGGCCTGGAG-TGGAGATATGGGTCTGGAGAGGAGATATGAGCCTGGAG-AGGAGATATGGGCCTGGGGTGGAGATAGAGGCCTGGA-G i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e macFas5.chr19 55621569 17703 + 59248254 I a score=6559.000000 s hg38.chr19_GL949747v2_alt 496280 7 + 729520 TGGAGAT s panTro4.chr19 59767410 7 + 63644993 TGTAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685929 7 + 60714840 TGTAGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237321 7 - 106955855 TGGAGAC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47763599 7 + 51301725 tTGAGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47481252 7 + 50890351 TGGAGAT i chlSab2.chr6 C 0 I 238 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e macFas5.chr19 55621569 17703 + 59248254 I e rheMac3.chr19 60522301 12 + 64156825 I a score=3784.000000 s hg38.chr19_GL949747v2_alt 496287 12 + 729520 -------------------CTGGGCCAGGAA s panTro4.chr19 59767417 12 + 63644993 -------------------CTAGGCCTGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685936 12 + 60714840 -------------------CTAGGCCTGGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237328 12 - 106955855 -------------------ATGGGCCTGGAA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47763606 30 + 51301725 ATGGGCTTGTTGTGTAGATCTAGGCCTGGG- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e chlSab2.chr6 47481259 238 + 50890351 I e macFas5.chr19 55621569 17703 + 59248254 I e rheMac3.chr19 60522301 12 + 64156825 I a score=3860.000000 s hg38.chr19_GL949747v2_alt 496299 6 + 729520 GTGTTG s panTro4.chr19 59767429 6 + 63644993 GTGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685948 6 + 60714840 GTAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237340 6 - 106955855 GTGATG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47763636 6 + 51301725 GTGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47481497 6 + 50890351 GTGCAG i chlSab2.chr6 I 238 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e macFas5.chr19 55621569 17703 + 59248254 I e rheMac3.chr19 60522301 12 + 64156825 I a score=107759.000000 s hg38.chr19_GL949747v2_alt 496305 149 + 729520 ATCTGGGCCTGGAGCCTGGGTCTCTCCACAGCTGAGAGCCCTGTTCTTGGCAGCAGGTAG-CAGGGAGGCTAAGTTTACCTTCAGCCCAGCAAGGGCCTGGCTGCCAAGACACACAGTGCAGTGGGGGCAGCAGGG--TGCCCTGGTTTGCC s panTro4.chr19 59767435 150 + 63644993 ATCTGGGCCTGGAGGCTGGGTCTCTGCACAGCCGAGATCCTTGTTCCTGGGGGCAGGTAGGCACTGAGGATGAGTTTCCCTTCAGCCCAGCAAGGGCCTGGCTGCCAAGACGCACAGTGCAGTGGGGGCAGCAGGG--TGCCCTGGTTTGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56685954 150 + 60714840 ATCTGGGCCTGGAGGCTGAGTCTCTGCACAGCTGAGATCCTTGTTCCTGGGGGCAGGTAGGCAGCGAGGGTGAGTTTAACTTCAGCCCAGCAAGGGCCTGGCTGCCAAGACACACAGCCAAGTGGGGGCAGCAGGG--TGCCCTGGTTTGCC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47763642 150 + 51301725 ATCTGGATCAGGAGGCTGGGTCTCTGCACAGCTGACATCCCTGCTGC-GGGGGCAGGTGGGCAGCCAGGGTGAGTTTACCTTCAGCCCAGCAAGGGCCTGGCTGCCCAGACGCACAG-CCCGTGGGGGCAGCAGGGGAGGCCCTGGTTTGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47481503 151 + 50890351 ATCTGGATCCGGAGGCTGGGTCTCTGCACAGCTGACATCCCTGCTGC-GGGGGCAGGTGGGCAGCCAGGGTGAGTTTACCTTCAGCCCAGCAAGGGCCTGGCTGCCCAGACGCACAGCCCCGTGGGGGCAGCAGGGGAGGCCCTGGTTTGCC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e nomLeu3.chr10 103237346 0 - 106955855 C e macFas5.chr19 55621569 17703 + 59248254 I e rheMac3.chr19 60522301 12 + 64156825 I a score=6870.000000 s hg38.chr19_GL949747v2_alt 496454 6 + 729520 TGCAGT s panTro4.chr19 59767585 6 + 63644993 TGCAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56686104 6 + 60714840 TGCAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237346 6 - 106955855 TACAGA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47763792 6 + 51301725 TGCAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47481654 6 + 50890351 TGCAGA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e macFas5.chr19 55621569 17703 + 59248254 I e rheMac3.chr19 60522301 12 + 64156825 I a score=215379.000000 s hg38.chr19_GL949747v2_alt 496460 132 + 729520 TGGATCGTCTATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACTCATGGGTGAGTCCTTCCCCAAACCTTAGGGTGTCATCTCCCCACATAAGAGGATTTTTCTGAAACAGGA--------------------------------------GG s panTro4.chr19 59767591 132 + 63644993 TGGATCGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGAGGGCCTGTCCACACATGGGTGAGTCCTTCCCCATATCTTAGGGTGTCATCTCCCCACATAAGAGGATTTTCCTGAAGTGGGA--------------------------------------GG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56686110 132 + 60714840 TGGATGGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGGTCCAGAGGGCCTGTCCACACATGGGTGAGTCCTTCCCCAAACCTTAGGGTATCATCTCCCCACATAAGAGGATTTTCCTGAAACTGGA--------------------------------------GG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237352 170 - 106955855 TGGATCCTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGTGGGTGAGTCCTTCCCCAAACCTTAGGTTGTCATCTCCCCACGTAAGATGATTTTCCGGAAACAGGAGGCAGGCAGCACAGGGGGTTGACTGATGGGCTGACCATGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522313 132 + 64156825 TGGATCATCCATCATGATCTTTCTTTATAGGGTTCTTCTTGCTGCAGAGGGCCTGGTCACATGTGGGTGAGTCCTTCTCCAAACCTTAGGTTGTCATCTCCCCACATAAGATGATTTTCTTGAAACATGA--------------------------------------GG i rheMac3.chr19 I 12 I 160 s papAnu2.chr19 47763798 132 + 51301725 TGGATCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGGTCCAGAGGGCCCGTCCACACACGGGTGAGTCCTTCCCCAAACCTTAGGGTGTCATCTCCCCACCTAAGAGGATTTTCCTGAAACAGGA--------------------------------------GG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47481660 132 + 50890351 TGGATCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGGTCCAGAGGGCCTGTCCACACACGGGTGAGTCCTTCCCCAAACCTTAGGGTGTCATCTCCCCACCTAAGAGGATTTTCCTGAAACAGGA--------------------------------------GG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e macFas5.chr19 55621569 17703 + 59248254 I a score=128888.000000 s hg38.chr19_GL949747v2_alt 496592 129 + 729520 GAAGTCCTGTCGGGGAGTCTCTCATAAACTAGGAAGAGGGGACCCTTGGATACTCGGCCCACATTTCTGACCTCGCCCTCCCCGGCCTTTCTTTCCCTTTCCTGAGTCAAGCTCTGTGAAGA-CTGGGGT s panTro4.chr19 59767723 129 + 63644993 GAAGGCCTGTCGGGGAGTCTCTCATAAACTAGGAAGAGGGGACCCTGGGATGCTCGGCCCACAGTTCTGACCTCGCCCTCCCCGGCCTTTCTTTCCCTTTCCTGAGTCAAGCCCTGTGAAGA-CTGGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56686242 129 + 60714840 GAAGTCCTGTCGGGGAGTCTCTCATAAACTAGGAAGAGGGGACCCTCGGATGCTCGGCCCATAGTTCTGACCTCGCCCTCCCCAGCCTTTCTTTCCCTTTCCTGATTCAAGCTCTGTGAAGA-CTGGGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237522 121 - 106955855 GAAGCCATGT--GGGAATCTCTCATGAACTAGGAAAAGGAAGTCATGGGAAGCTTAG-CCACAGTCCTGTCCTAGCCCTCCCCGGCCTTTCTTTCCCTTGGCTGAGT------CTATGGGGACCCAGGAG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47763930 129 + 51301725 GAAGTCCTGTCAGACAGTCTCTCATAAACTAAGTAGGGGAGACCCTGGGGTGCTCGGCTCACACTTCTGACCTCGTCCTCTCTGGCCTTTCTTACCCTTGGCTGAGTCAAGCTCTGTGAAGA-CCGGGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47481792 129 + 50890351 GAAGTCCTGTCAGAGAGTCTCTCATAAACTAAGAAGGGGGGACCCTGGGGTGCTCGGCTCACACTTCTGACCTCGTCCTCTCTGGCCTTTCTTACCCTTGGCTGAGTCAAGCTCTGTGAAGA-CCGGGGT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e macFas5.chr19 55621569 17703 + 59248254 I e rheMac3.chr19 60522445 160 + 64156825 I a score=609458.000000 s hg38.chr19_GL949747v2_alt 496721 379 + 729520 GAGACTGGGGTGCTCCAAGCTGGGGTGTGCAGGGAGGAAGTGGTGTCAGCAGCAGAGAAAGAGAGGGAAGCAGTGCTAGGAACAGCAGGTCCTCTGAGGACAAAGGTATAACTGACACCCTCCAGCGTTTCCGTGACGGTAGGGACTGCAGTGTGGCTGCGGTCTTTCTACCAGAAGAGG-G-GGGAAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGA-GGGGGCTCA-------------GTTCATGAATTGGCTGATATTCCATTCACATAGGACATGCCCTCCATGCCGTGTCTACTTTGTGTTGTTTTATGTGAGTAATTTTGCAGTATTAAAATCTAGTAAGAGTCACTTATTCAGCACTTGCTCAAAGTTCTCAGCTGACACT s panTro4.chr19 59767852 381 + 63644993 GAGACTGGGGTGCTCCAAGCTGGGGTGTGCAGGGAGGAAGTGGTGTCAGCAGCAGAGAAAGAGAGGGAAGCAGTACTAGGAACAGCACGTCCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGCGTTTCCGTGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTG-GGGAAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCA-------------GTTCATGAATTGGCTGATATTCCATTCACATAGGACATGCCCTCCATGCCGTGTCTACTTTGTGTTGTTTTATGTGAGTAATTTTGCAGTATTAAAATCTAGTAGGAGTCACTTATTCAGCACTTGCTTAAAGTTCTCAGCTGACACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56686371 381 + 60714840 GACACTGGGGTGCTCCAAGCTGGGGTGTGCAGGGAGGAAGTGGTGTCAGCAGCAGAGAAAGAGAGGGAAGCAGTGCTAGGAACAGCAGGTCCTCTGAAGACAAAGGTGTAACTCACACCCTCCAGGGTTTCTGTGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTG-GGGAAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCA-------------CTTCATGAATTGGCTGATATTCCATTCACATAGGACATGCCCTCCATGCCGTGTCTACTTTGTGTTCTTTTATGTGAGTAATCTTGCAGTATTAAAATCTAGTAAGAGTCGCTTCTTCAGCACTTGCTTAAAGTTCTCAGCTGACACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237643 376 - 106955855 GAGACTGAAGTGCTCAAAGCAGCGGTGTGCAGGGAGGAAGTGGTGTCACCAGCAGAGGAAGGGAGGGAAGCAGTGCTAGGAACAGCAGG-CCTCTGAGGACAAGAGCATAACTCACACCCTCCAGCGTTTCCATGACGGTAGGGGCTGCGGTGTGGCTGCTGTCATTCTACCAGAAAAGGTG-GGGGAACCACAGTCATGACCCTGACATTCCAGATCTTCTAATGGGGGCTCAGCTGTTTATTATGGTTCATGCATTAGCTGAT-----------------CATGCCCTCCATCCTGTGTCTACTTTGTGTTCTTTTCTGTGAGTAATCTTGCAGTATTCAAATCTAGTAAGAGTCGCTTCTTCAGCACTTGCTCAAAGTTCTCAGCTGACATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522605 393 + 64156825 GAGACTGGAGTGCTCAAAGCAGCAGTGTGTGGGGAAGAAGTGGTGTCACCGACAGAGGAAGGGAGGGAAGCAGTGC-AAGAACAGCCAG-CCTCTGAGGACAAGAACGTAACTCACACCCTCCAGTGTTTCCATGATGGTCGGGGCTGCAGTGTTGCCGCTGTCATTCTACCAGAAGCGGGGTGGGGAACCACAGTCATGATCCTGACATTTCAGATCTTCTAATGAGGGCTTAGTTGTTTATTTTGGTTCATGCATTAGCTGATATTCCATTCACAAAGGTCATGCCCTCCATCCTGTGTCTACTTTGTGTTTTTTTATGTGAGTAATCTTGCAGTATTAAAATCTAGTAAGAGTCACTTATTCAGCACTTGCTCAAAGTTCTCAGCTGACACT i rheMac3.chr19 I 160 C 0 s papAnu2.chr19 47764059 381 + 51301725 GAGCTTGGGGTGCTCCAAGCTGAGGTGTGCAGGGAGGAAGTGGTGTCAGCgactgaggaagggagggaagcagtGCTAGGAACAGCAGGTCCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGTGTTTCCATGAcggtcagggctgcagtgtggCTGCTGTCACTCTAccagaagatgtg-gagaaaccaCAGCCATGACCCTGACATTCCAAATCTTCTGATGGGGACTCA-------------GTTCATGCACTGGCTGATGTTCCATTCACAAAGGACATGCCCTCCATGCCGTGTCTactttgtgttgttttatgtGAGTGATCTTGAAGCATTAAAATCTAGTAAGAGTCCCTTATTCAGCACTTGTTCAAAGCTCTCAGCTGACACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47481921 381 + 50890351 GAGCTTGGGGTGCTCCAAGCTGAGGTGTGCAGGGAGGAAGTGGTGTCAGTGACTGAGGAAGGGAGGGAAGCAGTGCTAGGAACAGCAGGTCCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGTGTTTCCATGACGGTCAGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTG-GGGAAACCACAGCCATGACCCTGACATTCCAAATCTCATGTTGGGGGCTCA-------------GTTCATGCACTGGCTGATATTCCATTCACAAGGGACATGCCCTCCATGCCGTGTCTACTTTGTGTTGTTTTATGTGAGTCATCTTGAAGTGTTAAAATCTAGTAAGAGTCCCTTATTCAGCACTTGTTCAAAGCTCTCAGCTGACACC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e calJac3.chr22 45773030 3104 + 49145316 T e macFas5.chr19 55621569 17703 + 59248254 I a score=250683.000000 s hg38.chr19_GL949747v2_alt 497100 136 + 729520 T--GTTGTAGGGAGA--CGCCATGTCTAT------GTGGGGTGGGTCCTTCCTGTAGCCCTGGGCACCCAGGTGTGGTAGGAGCCT-----------------TAGAAA-GTGGAAAT--GGGAGAATCTTCTGAGCACAGGGAGGGAGGGGTGGCTCCACATCCT s panTro4.chr19 59768233 138 + 63644993 TTTGTTGTAGGGAGA--TGACATGTCTAT------GCGGGGTGGGTCCTTCTTGTAGCCCTGGGCACCCAGGTGTGGTAGGAGCCT-----------------TAGAAA-GTGGAAAT--GGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCGGCTCCACATCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56686752 138 + 60714840 TTTGTTGTAGGGAGA--TGCCATGTCTGT------GTGGGGTGGGTCCTTCCTGTAGCCCTGGGCTCCCAGGTGTGGTAGGAGCCT-----------------TAGAAA-GTGGAAAT--GGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCGGCTCCACATCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103238019 138 - 106955855 T--GTTGTAGGGAGA--TGCCATGTCTAT------GCGGGATGGGTCCTTCCTGTAGCTCTGGGCACCCAGGTGTGGTAGGAGCCT-----------------TAGAAACATGGAAAT-GGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCAGCTCCACATCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522998 141 + 64156825 TTTCTTGTAGGGAGA--TGCCATGTCTAT------GCGAGATGGGTTCTTCCTGTAGCCCTGGGCACCCAGGTGTGGTAGGAGCCT-----------------TAGAAATGTGGAAAGTGGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCTGCTCCACATCCT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47764440 140 + 51301725 TTTGTTGTAGGGAGA--CGCCATGTCTAT------GTGGGATGGGTTCTTCCTGTAGCCCTGGACACCCAGGTGTGGTAGGAGCCT-----------------TAGAAACATGGAAAG-GGGAAGAATCTTCTGagcacagggagggaggggcGGCTCCACATCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47482302 140 + 50890351 TTTGTTGTAGGGAGA--CGCCATGTCTAT------GTGGGATGGGTTCTTCCTGTAGCCCTGGACACCCAGGTGTGGTAGGAGCCT-----------------TAGAAACATGGAAAG-GGGAAGAATCTTCTGAGCACAGGGAGGGAGGGGTGGCTCCACATCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45769926 161 + 49145316 --TATTCCAGGAAGACCTTCCATGTCCACTCTGGGGTGGGCCGGGTCCCTGTCCCACCACCAGGTACCCAGG-GCATCAGGGGCTTCATGTTACAGGGCAAAGCAGAACAGTGGGAAG--AAGGAAAGCCCCCAAGGACAGTGGCGGGTGGGGGGCTCCACACTCC i calJac3.chr22 T 3104 C 0 e canFam3.chr1 19894534 1689 - 122678785 T e macFas5.chr19 55621569 17703 + 59248254 I a score=613821.000000 s hg38.chr19_GL949747v2_alt 497236 323 + 729520 CCTCTCT-AAGGCAGTGCCTCCTTCTCCCCCAGGTGGTCAGGACAAACCCTTCCTGTCTGCCCGGCCCAGCACTGTGGTGCCTCGAGGAGGACACGTGGCTCTTCAGTGTCACTATCGTCGTGGG---------TTTAACAATTTCATGCTGTACAAAGAAGACAGAAGCCACGTTCCC----------ATCTTCCA---------CGGCAGAATATTCCAGGAGAGCTTCATCATGGGCCCTGTGACCCCAGCACATGCAGGGACCTACAGATGT--CGGGGTTCACGCCCACACTCCCTCACTGGGTGGTCGAC---ACCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAGA s panTro4.chr19 59768371 317 + 63644993 CCTCTCT-AAGGCAGTGCCTCCTTCTCCCCCAGGTGGTCACGACAAACCCTTCCTGTCTGCCTGGTCCAGTGCTGTGGTGCCTCGAGGAGGACATGTGACTCTTCGGTGTCACTATCGTGGTGGG---------TTTAACAATTTCATGCTGTACAAAGAAGACAGAATCCACGTTCCC----------ATC---------------GGCAGAATATTCCAGGAGAGCTTCAACATGAGCCCTGTGACCACAGCACATGCAGGGAACTACACATGT--CGGGGTTCACACCCACACTCCCCCACTGGGTGGTCGGC---ACCCAGCAACCCCGTGGTGATCATGGTCACAGGTCAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56686890 323 + 60714840 CCTCTCT-AAGGTGGCATCTCCTTCTCCCCCAGGTGGTCAGGACAAACCCTTCCTGTCTGCCTGGCCCAGCGCTGTGGTGCCTCGAGGAGGACACGTGACTCTTCGGTGTCACTATCGTGGTGGG---------TTTAACAATTTCATGCTGTACAAAGAAGACAGAATCCATGTTCCC----------ATCTTCCA---------GGGCAGAATATTCCAGGAGAGCTTCAAGATGAGCCCTGTGACCCCAGCACATGCAGGGACCTACACATGT--CGGGGTTCACACCCACACTCCCCCACTGGGTGGTCGGC---ACCCAGCAACCCCGTGGTGATCATGGTCACAGGTCAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103238157 323 - 106955855 CCTCTCT-AAGGTAGTGCCTCCTTCTTCCCCAGGTGGTCAGGACAGGCCCTTCCTCTCTGCCTGGCCCAGCACTGTGGTGTCTCAAGGAGAACACGTGACTCTTCAGTGTCACTGTCGTCTTGGG---------TCTAACAAATTCAGTCTGTCCAAGGAAGACGGGATGCCTGTCCCT----------GAGCTCTA---------CAACAGAGTATTCTGGAACAGCTTCCTCATGGGCCCTGTGACCCCAGCACATGCAGGGACCTACAGATGT--CGGGGTTTTCACCCACACTCCCCCACTAGGTGGTCGGC---ACCCAGCAACCCCGTGGTGATCATGGTCACAGGTCAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60523139 324 + 64156825 CCTCTCTAAAGGCTGTGCCTCCTTCTCCCCCAGATGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCGCTGTGGTGCCTCAAGGAGAACACGTGAGTCTTCAGTGTCACTCTCATCTTGGG---------TTTACCATCTTCAGTCTGTACAAGGAAGATGGGGTGCCTGCCCCT----------GAGCTCTA---------CAACAGAAGATTCTGGAAGGACATCCTCCTGGGCCCTGTGACCCCGGCACACGCAGGGACCTACAGATGT--CGGGGTTCACACCTGCACTCCCCCACTGAGTGGTCGGC---TCCCAGCAACCCCCTGGTGATCACGGTCACAGGTCAGA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47764580 332 + 51301725 CCTCTCT-AAGGTGGAACCTCCTTCTCCCCCAGGTGGTCAGGACAAGACCTTCCTGTCTGCCCGGCCCAGCGATCTGGTGCCTCAGGGAGGACACGTGACTCTTCGGTGTCACTATCGTCGTGGGCTTTACAACTTTACCAACTTCACTCTGTACAAAGACGACAGAAGCCACGTTCCT----------GTCTTCCA---------TGGCAGAATATTCCAGGAGAGCTTCCTCATGGGCCCTGTGACCCCGGCACACGCAGGGACCTACAGATGT--CGGGGTTCATACCCGCACTCCCCCACTGAGTGGTCGGC---ACTCAGCGACCCCCTGGCTATCAGGGTCACAGGTCAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47482442 332 + 50890351 CCTCTCT-AAGGCGGCACCTCCTTCTCCCCCAGGTGGTCAGGACAAGACCTTCCTGTCTGCCCGGCCCAGCGATCTGGTGCCTCAGGGAGGACACGTGACTCTTCGGTGTCACTATCGTCGTGGGTTTAACAACTTTACCAACTTCACTCTGTACAAAGATGACAGAAGCCACGTTCCC----------ATCTTCCA---------CAGCAGAATATTCCAGCAGAGCTTCCTCATGGGCCCTGTGACCCCGGCACACGCAGGGACCTACAGATGT--CGGGGTTCACACCCGCACTCCCCCACTGAGTGGTCGGC---ACACAGTGATCCCCTGGTGATCAGGGTCACAGGTCAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45770087 319 + 49145316 CCTCTCT--AGGCTGCGCCTCCTCCTCTTCCAGGTGCTCTGTACAAACTCTCCCTGTCAGCCCGGCCGAGCCCTGTGGTTCCCCAGGGAGGACGTGTGACTCTCTCCTGTGATTCTCATCTTCGG---------TTTGTCACATTCAAAATATACAAAACATCTGGGACCCAGGACCGT----------GAGCTGCA---------CA-CTGGCCGTTCCA--ATGACTTCACCATCAACCCTGTGACCCCAGGACATGCAGGGACCTACAGATGTTCTGGATCTTTCAGCCGCACCTCAC-----AGTGGTCAGCTGTGCACAGCAACTCCCTGATGCTATTGGTCACAGGTAGGA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19892845 340 - 122678785 CCCATTT-AACACAGCCCCTCC-CCTCTCCTAGGGATGCACAGCAAACCCAGCCTCTCAGTTCTGCCCAGCCCTATCGTGCCCTCAGGAGGGAACGTGACCCTCCAGTGTGGTTCATGGAGAGGA---------TTTAACAGGTTTATTCTG-ATGAGGGAAGTAGAAGGCCAGCCCTCCTGGACCCGGGACTCCCAGCGAGCCCCCAGTGGAGAGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGATCCCCAGCCTCATGTGGACGTTCAGATGC--CATGGTTTTTACAGCAACACCCCCCAGGTGTGGTCACT---CCCCAGTGACCCTCTGGAGCTGCTGGTCTCAGGTGAGA i canFam3.chr1 T 1689 I 239 e macFas5.chr19 55621569 17703 + 59248254 I a score=2800.000000 s hg38.chr19_GL949747v2_alt 497559 1 + 729520 G s panTro4.chr19 59768688 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56687213 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103238480 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60523463 1 + 64156825 G i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47764912 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47482774 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45770406 1 + 49145316 G i calJac3.chr22 C 0 I 1011 e canFam3.chr1 19893185 239 - 122678785 I e macFas5.chr19 55621569 17703 + 59248254 I a score=912986.000000 s hg38.chr19_GL949747v2_alt 497560 592 + 729520 GCTTTCTGTCTGGGCTTCTCACTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGGGTGTCCATCAGGGTCCCATCACCCAGGCCCCAACTGTATTTGGGGTCAAGGGGGATTGAATACAGGGGAAATGGGCGCtgtggtgggaagaatcactgtcgccaatgatggctacattgtaaaccctggagcctgtgactatttatgttatagggcaggggactgaaggggaaggtggagctcaggttgttgatgagttgaccttgagatggggagacagcctggactgtcctgctgggctcagtgtaatcacaagggtccgcgtgagaggtggaggaagaggggagtggggattagagcagtgtagtgggagggagacgctatcagccactgtgggctttgaaggtggaggaaggccactagtcacagaatgcaggtggcctctaagggctggagaagtcaagagaactgattcg---ctgagtctccagagggaacgcagccctgcagatgccttgatttcagcacagggagaactggatccaatttctg-tccccagaagtggaaggggtcagtgtgttctctcctgctgccatg s panTro4.chr19 59768689 591 + 63644993 GCTTTCTGTCTGGGCTTCTCACTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGGGTGTCCCTCAGGGTCCCATCACCCAGGCCCCATCTGTATTTGGGGTCAAGGGGGATTGAATACAGGG-AAATGGGCGCtgtggtggaaagaataactgtccccaatgatggctacattgtaatccctggagcctgtcactatttacgttatagggcaggggactgaaggggaaggtggaactcaggttgttgatgagttgaccttgagatggggagacagcctggactgtcccggtgggctcagtgtaatcacaagggtccacatgagaggaggaggaagaggggagtggggattagagcagtgtagtgggagggagacgctatcagccactgcgggctttgaaggtggaggaaggccactagtcacagaatgcaggtggcctctaagggctggagaagtcaagagaactgattcg---ctgattctccagagggaacgcagccctgtagacgccttgatttcagcacagggagaactggatccaatttctg-tctctagaagtggaaggggtcagtgtgttctctcccgccgccatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56687214 592 + 60714840 GCTTTCTGTCTGGGCTTCTCACTGTCCCACCTCCTGAATCCCACAGCTTCTGGTGGGGGTGTCCGTCAGGGTCCCATCATCCAGGCCCTGACTGTATTTGGGGTAAAGGGGGATTGAATACAGGGGAAATGGTCACtgtggtggaaagaataactgtccccagtgatggccacattgtaatccctggagcctgtgactatttatgttataggggaagggactgaaggggaagatggagctcaggttgttgatgagttcaccttgagatggggagatggcctggactgtcccgctgggctcagtgtaatcacaagggtccacatgagaggaggaggaagaggggagtggggattagagcagcgtagtgggagggagatgctatcaaccactgcgggctttgaagatggaggaaggccactagtcactgaatgcaggtggcctctaagggctggagaagtcaagagaactgattcg---ctgagtctccagagggaacgcagccctgtagacgccttgattttaatgcagggagaactggatccaatttctg-tctccagaagtggaaggggtcagtgtgttctctcctgccgccatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103238481 594 - 106955855 GCTATCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGGACATCCATCAGGGTCCGATCATCCAGGCCCCGACTCTATTTGGGGTAAAGGGGGATTCAGTACAGAG-AAATAGGTGCTATGGtgggaagaataattgtccccaatgatggctacatggtaatccatggaccctgtgactatttatgttatagggcaggggactgaaggggaagatggagctcaggttgttgatgagttgaccttaagatggggagatggcctggactgtcctgctgtgctcagtgtaatcacaagggtcctcatgagaggaggaggaagaggagagtggggattacagcatcgtagtgggagggagactccatcagccacagcgggctttgaagatggaggaaggccatgagccaca-aaggcaggtggcctctaagggctggagaagtcaagggaactgattcttccctgagtctccagaggaaacacagccctgaagacgccttgattttagcccagagagaactgggtccgatttctgttctccagaagtggaaggggtcATTGTATTCTCTCCTGCCACCATG i nomLeu3.chr10 C 0 M 8807 s rheMac3.chr19 60523464 584 + 64156825 GGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGCTGGGGGTGTCCACCAGGGTCCCATCACCCAGGACCTGACTGTCTTTAGGGTAAAGggggattcagtacagaa-aaataggtactgtggtgggaagaataattgtccccagttatggctacatggtaatcagtggaccctgtgactctttatgttatagggcaggggactgaaggggaagatggagctcaggttgttgatgagttgaccttgagatggggagacgtcctggactgtcccactgggctcagtgtaatcacaagggaccacatgagaggaggaggatgaggagagtggggattagaacagcatagtgggagg--------gagactcactacaggctttgaaggtgaaggaaggccacgaaccatg-aaggcaggtgg-ctctaagggctggagaagtcaagggaactgattct-ccctcagtctccagtggaagcacagccctgcagatgccttgattttagcccagagagaactgggtcagatttctgttctccattagtagaaggggttattgtattctctcctgccaccatg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47764913 585 + 51301725 GGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGCTGGGGGTGTCCACCAGGGTCCCATCACCCAGGACCTGACTGTCTTTGGGGTACAGGGGGATTGAATACAGGG-AAATGGGTGCTGTGATGGGAGGAATAACTGTCCCCAGTTATGGCTACATGGTAATCCGTGGACCCTGTGACTCTTTATGTTATAGGGCAGGGGACTGAAGGGGAAGATGGAGCTCAGGTTGTTG-TGAGTtgaccttgagatggggagatggcCTGGACTGTCCCAGGGGgctcagtgtaatcacaaggcAACAaacaagaggaggaggatgaggagagtGGGGATTAGAGCAGCGTCGTGGGAGAT----TCTATCAGCCACTGTGGGctttgaaggaggaggaaggccaCAAGCCACA-ATGGCAGGTGGCCTCTACGGGCTGGAGAAGTCAAGAGAACCGCTCTG---CTGAGTATCCAGAGGGAACACAGTTCTGTAGACGCCTTGATTTCAGCCCAGGGAGAACTGGATCCAATTTCTG-TCTCcagaagtgcaaggggtcagtgtgttctctcctgctgccata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47482775 581 + 50890351 GGCTCCTGTCTGGGCTTCTCCTTGTCCCAACTCCTGAATCCCAGAGCTTCTGCTGGGGGTGTCCGTCAGGGTCCCATCACCCAGGACCTGACTGTCTTTGGGGTAAAGGGGGATTTAATACAGGG-AAATGGGTGCtgtgattagaagaataactgtccccaa-tatggttacattctaatccctggagcctgtgactctttatgctatagggcaggggactgaaggggaagagggagctcaggttgttgatgagttgaccttgagatggggagacggcctggactgtcccactgggctcagtggaatcacaaggcaccaaacga---gaggaggatgacaagagtggggattagagcagcgtcgtgggagag----tccatcagccactgtgggctttgaaggtggaggaa-gccacgagccaca-atgaaaggtggcctctacgggctggagaagtcaagagaattgctccg---ctgagtctccagagggaacacagttctgtagacgccttgattttagcccagggagaactggatccaatttctg-cctctaaaagtggaaggggtcactgtattctctcctggcaccatg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19893185 239 - 122678785 I e calJac3.chr22 45770407 1011 + 49145316 I e macFas5.chr19 55621569 17703 + 59248254 I a score=75849.000000 s hg38.chr19_GL949747v2_alt 498152 64 + 729520 tttgtgataattttctgcagcagcaacaggaaaccgacacaGGAACCCAGGTCAAGGACAAGCT s panTro4.chr19 59769280 64 + 63644993 tttgtggtaattttctgcagcagcaacaggaaaccaacacaGGAACCCAGGTCAAGGACAAGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56687806 64 + 60714840 tttgtgataattttctgcagcagcaacaggaaaccaacacaGGAACCCAGGTCAAGGACAAGTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524048 64 + 64156825 tttgtgataattttctacagcagcaacaggaaaccaacacaggaactcaggtcaaggacaagtt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47765498 63 + 51301725 ttTGTGATAATTTTCTGCTGCAGCAACAagaaaccaacacaggaacat-gGTCAAGGACAAGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47483356 63 + 50890351 tttctgataattttctgccacagcaacaggaaaccaagacaGGAACAT-GGTCAAGGACAAGTt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19893185 239 - 122678785 I e calJac3.chr22 45770407 1011 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55621569 17703 + 59248254 I a score=128517.000000 s hg38.chr19_GL949747v2_alt 498216 188 + 729520 AGGAAACCAAACAAGGAtagccaggtgtggtggtgggcacgagtaatccaacgactggggaggctgaggcaagagaatcacttgaaccggggaggcagaggttgcagtgagccaagacaacaccactgcactccagcctgggtgaaaaagtga----ctgtctcaaaaataaaTTAATTAATCAATTAATTA s panTro4.chr19 59769344 188 + 63644993 AGGAAACCAAACAAGGACagccaggtgtggtggtgggcacaagtaatccaatgactggggaggctgaggcaagagaatcacttgaactggggaggcagaggtttcagtgagccaagacaacaccactacactccagcctgggtgaaaaagtga----ctgtctcaaaaataaattaattaatcaattaatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56687870 188 + 60714840 AGGAAACCAAACAAGGAtagccgggcgtggtggtgggcgcgagtaatccaacgactggggaggctgaggcaagagaatcacttgaaccggggaggcagaggtttcagtgagccaagaccacaccactacactccagcctgggtgaaaaagtga----ctgtctcaaaCATAAATTAATTAATCAATTAATTG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47765561 175 + 51301725 AGGAAACCAAACaacaatagctgggcatggtggtgggcacgaGTAAACCAACGACTGG-------------ATtcaatctcttgaatccgggag---gaagttgcagtgagccaagaccacaccactacactccagcctgggtgaaaaagtca-actctgtgtcaaaaattaaataattaatcaattaatta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47483419 176 + 50890351 aagaaacca---aacgatagccgggcatggtggtgggcacgagtaaaccaatgactgg-------------attcaatcgcttgaatccgggaggcagaaattgcagtgagccaagaccacaccactatactccagcctgggtgaaaaagtgacactctgtctcaaaaaTCaattaattaatcaatgaatta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19893185 239 - 122678785 I e calJac3.chr22 45770407 1011 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55621569 17703 + 59248254 I e rheMac3.chr19 60524112 0 + 64156825 C a score=526674.000000 s hg38.chr19_GL949747v2_alt 498404 458 + 729520 AagaaaccaaacaaggagaaggttggctaccgtgggatcagcaagggtgggatgctgatgccaccaccaggctccatccacataggaaggggttgatgctcctggaaccagcaccagggaccaccctatggaagctggggccaTGGAGAAGGCACAGACATGGCAGGAGAGGCTCCCAATCCCCATCAGGAACAGGGTGTGTGGACACTGATGTCTGCCTTACTGATGAGTTGATACCTC-TGCCAGAGACTCCAATTTGTTCAAAAGAGATTGATTCAGGCTGCTGAGAGCCTGGACATGCAGCCTG-------TCCTCTTCCACCCCCACATAGACAGCAGGAAAGAGACTAGTGGGAAAGAGATACAACAGCCCAAGAGATGAGGCTCTCTTCACAGTGGGAAGGGAGTCAGGGGCTACTGGAGACAGAGGGACAGAGAAGAGGGAGGAAGACAAATGGAGGG s panTro4.chr19 59769532 459 + 63644993 aagaaaccaaacaaggagaaGGTTggctaccctgagatcagcaagggcaggatgctgatgccaccaccaggctccatccacataggaaggggttgatgctcctggaaccagcaccaggggccaccctatggaagctggggccatggagAAGGCACACACATGGCAGGAGAGGCTCACAATCCCCATCAGGAACAGGGTGTGTGGACACTGATGTCTGTCTTACTGATGAGTTGATACCTCCTGCCAGAGACTCCAATTTGTTCAAAAGAGATTGATTCAGGCTGCTAAGAGCCTGGACATGCAGCCTG-------TCCTCTTCCACCCCCACATAGACAGCAGGAAAGAGATTAGTGGGAAACAGATACAACAGCCCAAGAGATGAGGCTCTCTTCACAGTGGCAAGGGAGTCAGGGGCTACTGGAGACAGAGGGACAGAGAAGAGGGAGGAAGACAGATGGAGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56688058 459 + 60714840 AagaaaccaaacaaggagaaggttggctaccctgaggtcagcaagggcaggatgctgatgccaccaccaggctccatccacataggaaggggttgatgctcctggaaccagcactgggggccaccctatggaagctggggccacggagaaggcacagacatggcaggagaggctcccaaTCCCCATCAGGAACAGGGTGTGTTGACACTGATGTCTGCCTTACTGATGAGTTGATACCTCCTGCCAGAGACTCCTATTTGTTCAAAAGAGATTGATTCAGGCTGCTAAGAGCCTGGATGTGCAGCCTG-------TCCTCTTCCACCCCCACATAGACAGCAGGAAAGAGATTAATGGGAAACAGATACAACAGCCCAAGAGATGAGGCTTTCTTCACAGTGGGAAGGGAGTCAGGGGCTACTGGAGACAGAGGGACAGAGAAGAGGGAGGAAGACAGATGGAGGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524112 456 + 64156825 aagaaaccaaacaaggagaaggttggctacactgatttcagcacaggcggaatactgatgctaccaccaggctcgatccacagaggaaggggttgattctcctggaaccagcactaggggccaccctatggcagctgggaccacggaaaaggcacagacatggcaggagAGGCTCCCAACCCCCATCAGGAACAG-------GGACATTGGTACCTGCCTTACTGATGAGTTCACACCTCCTGCCAGCCATTCCCATTTGTCCAAAAGAGATTGATTCAGGCTGCTGAGAGCCTGGACATGCAGCCTGTCGTGGTTCCTCTTCCAGCCCCACATAAACACCAGCAAAGAGATTAGTGGGAAACAGATACAACAGCCTAAGAGATGACACTG--AGCCCAGTGGGAAGGGAATCAGGGG-TCCTAGAGACAGAGAGACAGGGAAGAGGGAGGGAGACAGATGGAGGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47765736 464 + 51301725 aagaaaCCAAACAAGGAGAAGGTTGGCAACCCCGAGATCAGGAAGGGCGGGACGCTGATGCCACCACCAGGCTCCATCCACATAGGGAGGGGTCGATGCTCCTCGAACCAGCACCAGGAGCCACCCTGTGGAAGCTGAGGCCATGGAGAAGGCACAGGCGTGGCAGGAAAGGCTCCCAATCCCCACCAGGAACAGGGAGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATTCCTCCTGCCAGGGACTCCAGTTTGTCCAAAAGAGATTGAACCAGGCTGCTAAGAACCGGGACATGGAGCCTGCCGTAGTTCCTCTTCCAGCCCCACATAGACAGCAGGAAAGAGATGAGTGGGAAACAGATACAGCAGCCTAAGAGATGAGGCTG--AGCCCAGTGGGAAGGGCGTCCGAGGCTACTAGAGACAGAAGgacagagaagagggagggacaCAGATGGAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47483595 461 + 50890351 aagaaaccaaacaaggagaaggttggcaaccccgagatcaggaagggctagacgttgatgccaccaccaggctccatccacatagggaggggtcgatgctcctagaaccagcaccaggagccaccctgtggaagctgaggccatggagAAGGCACAGGCATGGCAGGAGAGGCTCCCAATCCCCACCAGGAACAGGGAGTGTGGACACTGGTGCCTGCCTTACTGATCAGTCCATACCTCCTGCCAGGGACTCTAGTTTGTCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGAAATGCAGCCTGCCGTGGTTCCTCTTCCAGCCCCACACAGACAGCAGGAAACAGATTAGTGGGAAACAGATACAACAGCCTAAGAGATGAGGCTG--AGCCCAGTGGGAAGGGCATCCGAGGCTACTAGAGACAGACGGACA---AAGAGGGAGGGACACAGATGAAGGG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19893185 239 - 122678785 I e calJac3.chr22 45770407 1011 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55621569 17703 + 59248254 I a score=21128.000000 s hg38.chr19_GL949747v2_alt 498862 20 + 729520 ACCTGCACCAGGGGATATGG s panTro4.chr19 59769991 20 + 63644993 ACCTGCACCAGGGGATATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56688517 20 + 60714840 ACCTGCACCAGGGGATATGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524568 19 + 64156825 ACCTGCACCA-GGGTTATGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55639272 20 + 59248254 ACCTGCAACAGGGGTTATGG i macFas5.chr19 I 17703 C 0 s papAnu2.chr19 47766200 16 + 51301725 ACCTacacaaggggat---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484056 16 + 50890351 AACTGCACCAGGGGAT---- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19893185 239 - 122678785 I e calJac3.chr22 45770407 1011 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M a score=219282.000000 s hg38.chr19_GL949747v2_alt 498882 142 + 729520 GCACAG-AAAAGACACGgagacacagagagggaggagagagacagaC------CTCTGGGAGGGGAACCCTCACTCATTCCAGGTGCCATGGATGGGATGATAAAGAGAGATGCCTTCTAAACTCACAACTTCTCTTTCTAGGAAACCA s panTro4.chr19 59770011 141 + 63644993 GCACAG-AAAAGACATGGAGATGCAGAGAGGGAGGAGAGAGACAGAC------A-CGGGGAGGGGAACCCTCACTCATTCCAGGTGCCATGGATGGGATGATAAAGAGAGATGCCTTCTAAACTCACAACTTCTCTTTCTAGGAAACCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56688537 142 + 60714840 GCACAG-AAAAGACACGGAGATGCAGAGAGGGAGGAGAGAGACAGAC------GCCGGGGAGGGGAACCCTCACTCATTCCGGGTGCCGTGGATGGGATGATAAAGAGAGATGCCTTCTAAACTCACAACTTCACTTTCTAGGAAACCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524587 143 + 64156825 GCACAGAAAAGAACATGGAGACACAGACAGGGAGGAGAGAGATAGAC------ACCATGGAGGGGAAGTCTCACTTATTCCAGGTCCCATGAATGGGATGAGAAAGGGAGACGCCATCTGAACTCACAACCTCTCTTCTTAGGAGTCTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55639292 142 + 59248254 GCACAGAAAAGAACACGGAGACACAGAGGAGGAGGAGAGAGACAGAC-------CCGGGGAGGGGAAGCCTCACTGATTCCAGGTCCCATGGATGGGATGACAAAGAGAGACGCCTTCTAAACTCACAACCTCTCTTTCTAGGAGTCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47766216 136 + 51301725 -------aaaagacagggagacacagagagggagtacagagacagac------agcggggaggggAACCCTCACTCGTTCCAGGTGCCATGGATATGATGACAAAGGGAGACGCCTTCTAAACTCACAACCTCTCTTTCTAGGAGTCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484072 136 + 50890351 -------AAAagacagggagacacagagagggaggagagagacagag------agCCGGGAGGGGAACCCTCACTCATTCCAGGTGCCATGGATATGATGACAAAGGGAGACGTCTTCTAAACTCACAACTTCTCTTTCTAGGAGTCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3387407 140 - 49145316 --GCAG-AGAGAACAC--ACACACAGACAGGAAGGTCGTGGACGGGCTTTGGTGGTGATGAGGGAGAGCTTCACCC---TGAGGTCCCAGGTGAGGGGTGAGGAAG-GAGACCCCTGTGAATTCCTCTGTCTTTGCTCCCAGGTGCGTT i calJac3.chr22 T 1795 n 1011 e canFam3.chr1 19893185 239 - 122678785 I e nomLeu3.chr10 103239075 8807 - 106955855 M a score=5348.000000 s hg38.chr19_GL949747v2_alt 499024 2 + 729520 CA s panTro4.chr19 59770152 2 + 63644993 CA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56688679 2 + 60714840 CA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524730 2 + 64156825 CA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55639434 2 + 59248254 CA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47766352 2 + 51301725 CA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484208 2 + 50890351 CA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771418 2 + 49145316 CA i calJac3.chr22 I 1011 C 0 e canFam3.chr1 19893185 239 - 122678785 I e nomLeu3.chr10 103239075 8807 - 106955855 M a score=234438.000000 s hg38.chr19_GL949747v2_alt 499026 113 + 729520 GAAAACCTTCCCTCCTGGCCCACCCAGGGCCCCTGCTGAAATCAGGAGAGACAGTCATCCTGCAATGTTGGTCAGATGTCATGTTTGAGCACTTCTTTCTGCACAGAGAGGGG s panTro4.chr19 59770154 113 + 63644993 GAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAGATCAGGAGAGACAGTCATCCTGCAATGTTGGTCAGATGTCATGTTTGAGCACTTCTTTCTGCACAGAGAGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56688681 113 + 60714840 GAAAACCTTCCCTCCTGGCCCACCCAGGTCCCGTGGTGAAATCAGGAGAGAGAGTCATCCTACAATGTTGGTCAGATATAATGTTTGAGCACTTCTTTCTGCAAACAGAGGAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524732 113 + 64156825 GAAAGCCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGGAGAGATGGTCGTCCTGCAATGTTGGTCAGATATGAGGTTTGAGCATTTCCTTCTGCACAGAGAGGGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55639436 113 + 59248254 GAAAACCTTCCCTCCTGGCCCTCCCAGGTCCGCTGGTGAAATCAGGAGAGACGGTCGTCCTGCAATGTTGGTCAGATACCGTGTTTGAGCACTTCTTTCTGCACAGAGAGGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47766354 113 + 51301725 GAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGGAGAGACGGTCACCCTACAATGTTCCTCAGATACCGTGTTTGAGCACTTCTTTCTGCACAGTGAGGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484210 113 + 50890351 GAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGGAGAGACGGTCACCCTACAATGTTCGTCAGATATCGTGTTTGAGCACTTCTTTCTGCACAGTGAGGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771420 113 + 49145316 CAAAACCTTCCATCTCAGCCCACCCAAGCTCCCTGGTGGCTGCGGGAGTTAGGGTGACCGTGAGCTGTCACTCGGAGCTGGCATTTGATGAGTTTATCTTATACAAAGATGGG i calJac3.chr22 C 0 I 56 s canFam3.chr1 19893424 113 - 122678785 GGAAGCCCTCCCTCTTGACCCAGCAGGGCCCTGTTGTGACCTCTGGACAGAACCTGACCCTCCAGTGTCTCTCTGATGTCAGCTACGACAGATTCGCTCTGTTCAAGGAAGGG i canFam3.chr1 I 239 C 0 e nomLeu3.chr10 103239075 8807 - 106955855 M a score=68161.000000 s hg38.chr19_GL949747v2_alt 499139 50 + 729520 ATCTCTGAGGACCCCTCACGCCTCGTTG---GACAGATCCATGATGGGGTCTC s panTro4.chr19 59770267 50 + 63644993 ATCTCTCAGGACCCCTCACGCCTCGTTG---GACAGATCCATGATGGGGTCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56688794 50 + 60714840 ATCTCTAAGGACCCCTTATGCCTCGTTG---GACAGATCCATGATGGGGTCTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524845 50 + 64156825 ATCACTGAGGACCCCTTGCACCTCACTG---GACAGCTCCATGATGGGGGTTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55639549 49 + 59248254 ATCTCTGAGGACCCC-TATGCCTCGTTG---GAGAGCTCCATGATGGGGGCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47766467 50 + 51301725 AACTTTGAGAAGCCCCTGCACCTTGTTG---GAGAGCTCCATGGTGGAGGTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484323 50 + 50890351 AACTTTGAGAAGCCCTTGCACCTTGTTG---GAGAGCTCCATGGTGGGGGTTC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19893537 50 - 122678785 ---ACAAGTGACCTCCTTCAGCTTCATGGCCGGCAGACTCAGGCTGGGTTCTC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45771533 56 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M a score=320953.000000 s hg38.chr19_GL949747v2_alt 499189 153 + 729520 CAAGGCCAACTTCTCCATCGGTCCCTTGATGCCTGTCCTTGCAGGAACC--TACAGATGTTATGGTTCTGTTCCTCACTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCCCTGGACATCGTGATCACAGGTGAGA------GTGTCCAGA-CATTCTTCTC s panTro4.chr19 59770317 153 + 63644993 CAAGGCCAATTTCTCCATCGGTCCCATGATGCTTGCCCTTGCAGGGACC--TACAGATGCTACGGTTCTGTTACTCACACCCCCTATCAGTTGTCAGCTCCCAGTGATCCCCTGGACATCATGGTCACAGGTGAGG------GTGTCTAGA-CATTGTTCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56688844 153 + 60714840 CAAGGCCAACTTCTCCATCGGTCCCATGACACCTGCCCTTGCAGGGACC--TACAGATGCTACGGTTCTATTCCTCATTCCCCCTATGAGTGGTCAGCTTCCAGTGACCCCCTGGACATCGTGATCACAGGTGAGA------GTGTCCAGA-CATTCTTCTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524895 153 + 64156825 CCAGGCCAACTCTTCCGTGGGTCCCATGATACCTGCCCTTGCAGGGACC--TACAGATGTTTTGGTTCTGTCGCTTACTCCCCCTATGAGTGGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCATAGGTGAGA------GAATCCAGA-CCTGCCTCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55639598 153 + 59248254 CAAGGCCAACATCTCCATGGGTCCCATGACGCCTGCCCTTGCAGGGACC--TACCAATGCTATGGTTCTTTTACTCACTCCCCCTATGAATGGTCAGTCCCCAGTGACCCCCTGGACATTGTGATCACAGGTGAGA------GTGTCCAGA-CATTCTTCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47766517 153 + 51301725 CCAGGCCAACTACTCCATCAATTCCATGACGTCTGCCCTTTCAGGGACC--TACAGATGCTACGGTTCTGTCACTCACTCCCCCTATGTGTTGTCAGCTCCCAGTGACCCCCTGGACATGGTGATCACAGGTGAGA------GTGTCCGGa-cattcttctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484373 153 + 50890351 CCAGGCCAACTATTCCATCAATTCCACGACGTCTGACCTTGCAGGGACC--TACAGATGCTACGGTTCTGTCACTCAATCCCACTATGTGTTGTCAGCTCCCAGTGACCCCCTGGACATCGTGATCACAGGTGAGA------GTGTCCGGA-CATTCTTCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771589 154 + 49145316 CAAGGCTGTCTTTTGCCTGGGTCCTGTCACGCCGGCCCAGGCAGGAGCC--TACAGATGCTGTGGTTCTTTCAGTCACTCCCGCTATGAGTGCTCGGCTCCCAGCGACCCCCTGGAGATTGTGATCACAGGTGAGT------GTGGCTGGACCATCCTGCTC i calJac3.chr22 I 56 I 617 s canFam3.chr1 19893587 148 - 122678785 TGGGGCAGACTTCTCCCTGAGCCCAGTGAAATCCTCCC--GCGGGGGCCAGTACACATGCTACGGTGGACACAACCTCTCCTCCCA---GTGGTCAGCCCCCAGTGACCCCCTAGACATCCTGGTCACAGGTGAGGAGCCATGGGTACAGT-CA-------- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103239075 8807 - 106955855 M a score=321937.000000 s hg38.chr19_GL949747v2_alt 499342 183 + 729520 ATTGTCATTGGGACACAGAGTGAAT-GATCCAGGACTTGGAACCCCCAGGTGGT---CATGAGGAAGATAAGCGTGAGATTCTTATGGAGAGAGACTGACTCGGTGAGGTCTGTACCAACAGAGACAGGGAAACAGGAGACATAAGT---ACAGACCAGGTGTCATAAC--AGAGGACAGACACAGGGGCCA s panTro4.chr19 59770470 183 + 63644993 ATTGTCACTGGGACACAGAGTGAAT-GATCCAGGACTTGGAACCCCCAGGTGGT---CATGAGGAAGATAAGTGTGGGATTCTTATGGAAAGAGAGTGACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACATAAGT---ACAGAACAGGTGTCATAAC--AGGGGACAGACACAGGGGCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56688997 183 + 60714840 ATTGTCACTGGGATACAGAGTGAAT-GATCCAGGACTTGGAACCCCCAGGTGGT---CATGAGGAAGATGAGCGTGGGATTCTTATGGAGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACATAAGT---ACAGACCAGGTGTCATAAC--AGAGGACAGACACAGGGGCCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60525048 184 + 64156825 ACCCTTGCAGGGACAGGGAGTGAAT-GATCTAGCAC-CGGAAGCCCCAGGTGGT---CATGAGGAAGATGAGTGTGGGATTCTCATGGAGAGAAAGTGACTTCATGAGGTCTGTACCAACAGAGGTAGAGAAACAGGAGACACAAGT---ACAGACCGCACATCATAACGTAGAAGCCAGACACAGGGACCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55639751 183 + 59248254 ATTGTCACTGGGACACAGAGTGAAT-GATCCAGGACTTGGAAGCCCCAGGTTGT---CATGAGGAAGATGAGTGTGGGATTCTTATGGAGAGAGACTGACTTGGCGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGT---ACAGACCAGGTGTCATAAC--AGAGGACAGACACAGGGGCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47766670 183 + 51301725 attgtcacCGGGACACAGAGTGAAT-GATCCAGGACTTGGAAGCCCCAGGTGGT---CATGAGGAAGATGAGTGTGGGAATCTTATGGAGAGAGACTCACTTGGGGAGGTCTGTAccaacagagacagagaaacagaatacACAAGT---ACAGACCAGGTGTCATAAC--AGAGGACAGACACAGGGGCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484526 183 + 50890351 ATTGTCACTGGGACACAGAGTGAAT-GATCCAGTACCTGGAAGCCCCAGGTTGT---CATGAGGAAGATGAGTGTGGGATTCTTATGGAGAGAGACTGACTTGGCGAGGTCTGTACCAACAGAGACAGAGAAATAGGAGACACAAGT---ACAGACCAGGTGTCATAAC--AGAGGACAGACACAGGGGCCA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19893735 141 - 122678785 ----------GGACCCAGACTGCACAGGTCCCTGA--GGGGAACCCCAGGTAGTGGCCGCCAGGACCAAGGGTGTGGGGTCCACAGGGAGGGAG--------------------------AGAGACAGAGAAACCGGGGATAAAGATGGGAGAGACT-----------C--AGAGGACACAGACTCAGGTCA i canFam3.chr1 C 0 C 0 e calJac3.chr22 45771743 617 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M a score=641592.000000 s hg38.chr19_GL949747v2_alt 499525 424 + 729520 TACGGGGAAGTA-GAAAAGAGAGAAAGAGGTAAAGGAGACACTCAGACAGACAGACATGTGCCAGAGAGAAGTGTCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTGTCTCCACAAAGTGCT-TCTACGAGGAGAACCCA-----AGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGGCATCTACAGATGCCATGTTTATTCTGACACCTCTGCCTTCCATGCAGTGGAGCCATAATTATCCCAGGATATCATGGCCC------------CAGAACACCAACCCCTAAATACTGTGTGTACTTGGTGTCCCCAGACTAGATTCTGAGGCTCATATTCCAAATAATCCTACATATAATAGGATCACT-----------------GAGAGACACAGAGATAAATCAGGGACTTC s panTro4.chr19 59770653 423 + 63644993 TACAGGGAGGTA-GAAAAGAGAGAAAGAGGTAAAGGAGACACTCAGACAGACAGACATGTCCCAGAGAGAGGTGTCCTTCCATGCTGACTTTGCTCACAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTT-TCTACCAGAAGAAACCA-----AGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGCCACCTACAGATGCCGTGTTTATTCTGACACCTCTGCCTTCCATGCAATGGAGA-GTAATCGTCTCAGGATATCATGGCCC------------CAGAACACCAACCCCTGTATGCTGTGTGAACTTGGGGTCCCCAGACTGGATTCTGAGGCTCACATTCCAAATAATCCCACATATGATAGGATCGCT-----------------GAGAGACACAGAGAAAAATCAGGGACACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56689180 424 + 60714840 TACAGGGAGGTA-GAAAACAGAGAAAGAGGTAAAGGAGA----CAGACAGACAGACATGTCCCAGAGAGAGCTGTCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACCTCCACAGAGTGTTCTCTACTAGGAGAACCCAAACCCAGGACACCTGTATTTCTGACCTGAGTCGGTCCCTGTGGCCTCAGGCCTTGTGGCACCTACAGATGCTGTGTTTA-TCTGACACCTCTGCCTTCCATGCAATGGAGA-GTAATCATCCCAGGATATCATGGCCC------------CAGAACACCAACCCCTGTATGCTGTGTGAACTTGGGGTCCCCAGACTGGATTCTGAGGCTCATATTCCAAATAACCCCACATATGATAGGATTACT-----------------GAGAGACACAGAGAGAAATCAGGGACGTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60525232 452 + 64156825 TACAGCGTGTTAGGAAAAGAGATAAAGAGGTAAAGAAGACACACAGAGAGACAGACATGTCCCAGA-AGAGGTGTCCTTCCATGCCGACTTTGTTCAGAGACCAGGCACAGGTTAGAAGGTTCTGTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCA-----AAGAGACACGTCTATCTGGCCTGAGTTGGACCCTGTGGCCCCAGG-CTTGTGGCACCTACAGATGCCATGTTTATTCTTAAACCTCTGCCTTCCATGCAGTGGAGCTGTCATCGTCCCAGGACACCATGGCCCCAGGTGAGGGAGCAGAACACCAACCCCTGTATGCTGTGAGTTCCTGGAGTCCCCAGACTGGATTCTGAGGCTCATATT-CAAATAACACCACATGTTATAGGATTACTGAGAACAAAAGCCCACAGAGAGACACGGAGTGAAATCAGGGAAACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55639934 425 + 59248254 CACAGGGAGGTA-GAAAAGAGAGAAAGAAGTAAAGGAGACACTCAGACAGACAGACATGTCCCAGAGAGAGGTGCCCTTCCGTGCTGACTTTGTTCAGAGACCTGGCACAGGTTAGAAGCTTCATCTCTGTGTTACCTCCACAGAGTGATCTCTACCAGGAGAACCCA-----AGAGCACGCTTATTTCTCACCTTAGTTGGGCCCTGGGACCTCAGGCCTTGTGGCACCTACAGATGCCGTGTTGATTCTGACACCTCTGCCTCGTGTTCAGGGGAGCCGTAACCTTCTCACGATATCATGGCCC------------CAGAACACCAACCCCTGTGTGCTGTGTGTACTTGGGGTCTCCAGACTGGATTCTGAGGCTCATATTCCAAACAACCACACATATGATAGGATTCCT-----------------GACAGACACAGAGAGAAATCAGGGACATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47766853 423 + 51301725 TACAAGgaggta-gaaaagagagaaagagttaaagGGGACACCCAGACACACAGACATGTCCCAGAGAGAGGCGTCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGaagtttcatttctgttttacctCCACAAAGTGTT-TCTACCAGGAGAACCCA-----AGGACACCCATATTTCTGTCCTGAGTCAGCCCCTGTGGCCTCAGACCTTGTGGCACCTACAGATGCCATGTTTGTTCTGACACCTCTGCCTTCCGTGCAGTGGAGA-GTCATCGTCCCAGGATATCGTGGCCC------------CAGAACACCAACCCCTGTATGCTGTGTGTACTTGGGGTCGCCACACTGGATTCTGAGGCTCATATTCCACAGAATCCCACATATGATAGGATTCCT-----------------GAGAGACGCAGAGAGAAATCAGGAacatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484709 423 + 50890351 TACAGGGAGGTA-GAAAAGAGAGAAAGAGTTAAAGGGGACACCCAGACAGACAGACATGTCCCAGAGACAGTCGTCCTTCTGTGCTGACTTTGCTCAGAGACTCGGCACAGGTTAGAAACTTCATTTCTGTGTTACCTCCACAAAGCGTT-TCTACCAGAAGAACCCA-----AGGACACCCATATTTCTGTCCTGAGTCAGCCCCTGTGGCCTCAGGCCTTGTGGCACCTACAGATGCCGTGTTTGTTCTGACACCTCTGCCTTCCGTACAGTGGAGA-GTCATCGTCCAAGGATATCGTGGCCC------------CAGAATACCAACCCCTGTATGCTGTGTGTACTTGGGGTTCCCAGACTGGATTCTGAGGCTAATATTCCACAGAACCCCACATATGACAGGATTCCT-----------------GAGAGACACAGAGAGAAATCAGGAACATC i chlSab2.chr6 C 0 I 315 e canFam3.chr1 19893876 0 - 122678785 C e calJac3.chr22 45771743 617 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M a score=101793.000000 s hg38.chr19_GL949747v2_alt 499949 70 + 729520 AAAAAGCAAAGGCATAA--ACACACAGAGAATGAGCCAGAGGAAGGGGATTGAGAGACTCACAGACACACAA s panTro4.chr19 59771076 70 + 63644993 AAAAAGCAAAGACATAA--ACACACACAAAATGAGCCAGAAGAAGGAGATTAAGAGATTCACAGACACATAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56689604 70 + 60714840 AAAAAGCAAAGGCATAA--ACACACAGAGAATGAGCCAGAAGAAGGGGATTGAGAGACTCACAGACATATAa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60525684 72 + 64156825 AAAAAGCGAAGACATGAACACACACACAAAATGAGCCAGAAGAAGGGAATTGAGAGACTCACAGACATATAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55640359 70 + 59248254 AAAAAGCAAAGGCATAA--ACACACAGAGAATGAGCCAGAGGAAGGAGACTGACAAGCTCACAGCCACATAA i macFas5.chr19 C 0 I 509 s papAnu2.chr19 47767276 71 + 51301725 agaaagcaaagaaataaacacacacaga-aatgagCCAGAGTAAGGGGACTGAGAGACTCACAGAcacataa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47485447 69 + 50890351 aaaaagcaaaGACATAAACACACAGAGA-AATGAGCCAGAGGAAGGGGACTGAGA--CTCACAGACACATAA i chlSab2.chr6 I 315 C 0 e canFam3.chr1 19893876 0 - 122678785 C e calJac3.chr22 45771743 617 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M a score=315637.000000 s hg38.chr19_GL949747v2_alt 500019 204 + 729520 AAAGAAAG-AAAAGAGGGCAGAGGAGTGGAGAGAATGCTGGAAGGGAGGAGAGAAAAGCCCCAAAATCAGAACCCTGAGGGAG--GGGCACAAAGACAGAGAAAGATAAAGATGT-GGGGATGGATTGCAGAGATTCC-AAATAGAACTAGAGAGACTGAGAGGCAGAGAAAGACAAGGAGATGGagagagacagatgatagatggata s panTro4.chr19 59771146 201 + 63644993 AAAGAAAG-AAAAGAGGGCAGAG---TGGAGAGAATGATGGAAGGGAGGAGAGAAAAGCCCCAAAATCAGAACCCTGAGGGAG--GGACACAAAGACAGAGAAAGATAAAGATGT-GGGGATGGATTGCAGAGATTCC-AAATAGAACTAGAGAGACCGAGAGGCAGAGAAAGACAAGGAGATGGagagagagagatgatagatggata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56689674 204 + 60714840 caggaaag-aaaagagggcagaggaatggagagaatgatggaagggaggagagaaaagctccaaaatcagaaccctgagggag--gggcacaaagacagagaaagataaagatgt-ggggatggatTGCAGAGATTCC-AAATagaatgagagagactgagaggcagagaaagacaaggagatggagagagacagaTgatatatggata i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60525756 201 + 64156825 AGAGATAGAAAAAGAGGGCAGAGCAGT-GAGCATATGATGGAAGGGAGCAGAGAAATGCCCTAAAATCAGAGCCCTGAGGGAG--GGGCACGAAAACAGGGAAAGATAAAGATGT-GGAGATGGATTGCAGAGATGCCAAAAGAGAACTAGAGAGACTGTGAGGCAGAGAA----AAGGAGAAGGagaaagacagatgatagatagata i rheMac3.chr19 C 0 I 287 s macFas5.chr19 55640938 204 + 59248254 aGAGAGAG-AAAAGAGGGCAGAGAAGTGGAGAGAATGATGGAAGGAAGCTGAGAAAAGCCCTAAAATCAGAGTCCTGAGGGAG--AGGCACAAGGAGAGAGAAAGATGGAGATGTGGGGGATGAATTGCAGATATTTC-AAAGACAACGAGACAGACTGAGAGGCAGAGAAAGACAAGGAGATGGagacagagagatg-cagatggata i macFas5.chr19 I 509 C 0 s papAnu2.chr19 47767347 204 + 51301725 agagagag-aaaaaagggcagaggagtggagagaatgatggaagggaggagagaaaagctCCAAAATCAGAACCCTGAGGGCG--GGGCACAAAGACAGAGATAGATAAAGATGT-GAGGATGGATTGCagagattcc-aaatagaactagagagactgagaggcagagaaagacaaggagatggagagagacagatggtagatggata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47485516 202 + 50890351 ----AGAG-AAAAGAGGGCAGGGAAGTGGAGAGAATGATGGAAGGGAGCAGAGAAAAGCTCCAAAATCAGAACCCTGAGGGCGCAGGGCACAAAGACAGAGATAGATAAAGCTGT-GGGGATGGATTGCAGAGATTCC-AAATAGAACTAGAGAGACTGAGAGGCAGAGAAAGACAAGGAGATGGagagagacagatggtagatggata i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19893876 0 - 122678785 C e calJac3.chr22 45771743 617 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M a score=143049.000000 s hg38.chr19_GL949747v2_alt 500223 195 + 729520 gatagatatagatagatgataaataggtagatgatagataatggataggttatagatacatagatgatgattga----tagatgatacatagagatgatgat-----------------------------gat-gat-gatgat-gaagatagatagatagaagacacatatataaatatatagatacatagatgatacatagagactgacaggcagacagagaggtaat s panTro4.chr19 59771347 180 + 63644993 gatagatgtagatagatgataaataggtagatgatagataatggattggttatagatacatagatgatgactga----tagatgatacatagagatgatgat-----------------------------gat-gac-gatgat-gatgatagacacataga-------tatatacagagat-gatacataaat-------agaGACAGAGAGGCAGACAGAGAGGTAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56689878 185 + 60714840 gatagatatagatagatgataaataggtagatgatagataatggataggttatagatacatggatgatgattga----tagatcatacatagagatgatgat-----------------------------gat-gat-gaagatagaagacacacagataaa---tatatagatacatagat-gatacatagat-------agagacagagaggcagacagataggtaat i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55641142 157 + 59248254 ----------gatagatgataaataggtagatgatagataatagataggttatagatacatacatgatgactgattggtagatgatacatagagatgataat-----------------------------gat-gat-gataa--atagacaaagagataga---tac------------------------atgatacatagagatagagaggcagacatgtaac---- i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47767551 218 + 51301725 gatagatatagatagatgataaataggtagatgatagataatggatgggttatacatacatagatggtgactgataggtagatgatacatagagatgatgatagatagatagatagatagatagatagatagatagatagatag--atagatagacagataga---cacatagatagata-acagatacgtagatgatacatagagacagagagggagacagat------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47485718 205 + 50890351 gatagatagagatagatgataaataggtagatgatagataatggatgggttatagatacatagatggcaattgatagatagatgatacatagagatgattat---------------------gactgatagatagatagatca--atagatagatagataga---cacatggataggtacatagatacgtagatgacacatagagacagagaggcagacagatagggaat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19893876 0 - 122678785 C e calJac3.chr22 45771743 617 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60525957 287 + 64156825 I a score=588301.000000 s hg38.chr19_GL949747v2_alt 500418 432 + 729520 agagagag---agaga--gatgatacatagatacagata---atacatagatgattgatggataga----cagatagacaattgataga------------taaatgatac--atagatatagatgac----ag----ataatttgtagatagacacaaaata---------------------------gata------------gatagat----------------a-atagat--------------------------agaAATATGCAGAAAGTTATGAACAAGACAGAAAGTGAGAGACTCAGAATTATAGAAAAAGGAAGATCAAGTCAACCAATCCAAGGAGAGTCAGAGAGAATAAAACAATCCAAAAAGGGAAAGCATACCCAGGGGTGGGGAAGTGAGGTCagagacctagagagacagagaaggcggaaggaggaaatagacatgaagagagtt-------------------------------------------------------------------ggggtggagggtgag----agagagagagag--CATTAGGTCA-TAGAGCAGGGG-AGTGAGTTCTCAGCTCAGGTATGAGGGGAGCTG s panTro4.chr19 59771527 450 + 63644993 AGagagag---agagacagatgatacata--tatagata---ata----gatgattgatggataga----cagacagacaattgatagaga----gatagataagtgatac--ataaatatagatgat----ag----ataatttgtagatagacacaaaata---------------------------gataaatagatagatcgatagat----------------a-atagat--------------------------agaAATGTGCAGAAAGTTATGAACAAGACAGAAAGTGAGAGACTCAAAATTAAAGAAAAAGGAAGATCAAGTCAACCAATCCAAGGAGGGTCAGAGAGAATAAAACAATCCAAAAAGGGAAAACATACCTCAGGGTGGGGAAGTGAGGTCATAGACCTagagagacagaaaaggtagaaggaggaaatagatatgaagagagat-------------------------------------------------------------------ggggtggagggtgag----agagagagagagagCATTAGGCCA-TAGAGCAGGGG-AGTGAGTTCTCAGCTCAGGTGTGAGGGGAGTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56690063 470 + 60714840 agagagag---agata--gatgatacagagatgtagata---acacatagatgattgatggatgga----cagatagacaattgatagaga----gatagataaatgatacatatatatatagatgacagatag----ataatttgtagatagacacaaaata---------------------------gatagatagatagatagatagatagatagatagagagaca-atagat--------------------------agaAACATGCAGAAATTTATGAACAAGACAAAAAGTGAGAGACTCAGAATTGTAGAAAAAGGAAGATCAAGTCAACCAACCCAAGGAGGGTCAGAGAGAATAAAACAATCCAAAAAGGGAAAACATACCTAGGGGTGGGGAAGTGAGGTCAGAGACCTAGAGAGACAGAGAAGGTGGAAGGAGGAAATAGACATGAAGAGAGAT-------------------------------------------------------------------GGGGTGGAGGGTGAG----AGAGAGAG------CATTAGGTCA-TAGAGCAGGGG-AGTGAGTTTTCAGTTCAGGTGTGAGGGGAGCTG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60526244 454 + 64156825 agagagag---agata--gatgatacacagatatagata---acacataggtgattgatggatagagagctagatagacaattgatagatacagagatagatagatgatac--ataaatatagatgatagatag----ataatttgtagatagacaccaaata-------------------------------gataaatagatcgatagat----------------a-atagac--------------------------agaAATATGCAGAAAGTTGTGAACAGGACAGAAAGTGAGAAACTCAGAATTAAAGAAAAAGGAAGATCAAGTCAA-CAACCCAAGGAGGGTCAGAAAGAATAAAACCATGCAAAAAGGGGAAACATTCCTCGGGGTGGGGAAGTGAGGTCAGAGACCTAGAGAGACAGACAAGGCAGAAGGAGAAAATAGACATGAAGAGAGAAG------------------------------------------------------------------GGGCTGGAGGGT--G----AGAGAGAG------CATTAGGCCA-TAGAGCGGGGG-AGTGAGTTCTCAGCTCAGATGTGAGGGGAGCTG i rheMac3.chr19 I 287 C 0 s macFas5.chr19 55641301 567 + 59248254 aaatagag---agaga--gaggatacatagatatagata-------atagctgattgatggataca----tagatagttaatt------------gatagagagatgatac--atatatatagatgatagatagataaataatttgtagatacacaccaaatagttaaatagacgatagatagatagatagatagatagatagatagatagat----------------agatagacagatagataacggatacatagataatagaAATATGCAGAAAATTTTGAACAAGACAGAAAGTGAGAGACTCAGAATTAAAGAAAAAGGAAGATCAAGTCAACCAATCCAAGGAGGGTCAGAGAGAATAAAATGGTACAAAGAAAAAAAACATAGCTAGGGATGGGGAAGTGAGGTCAGAGACCTAGGGACATGGAGAAGGTGGAAGGAGGAAATAGACATGAagggagacggagtgaagggtgagagacagagagagagagagaaggtgaaaggagaaaatagacatgaagagacatggggtggagggtaag----aaagagag------CATTAGGTCACTAGAGCAGGTGCAGGGAGTTCTCAGCTCAGGTGTGAGGGGAGCTG i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47767769 460 + 51301725 agagagggaacagaca--gatgatacatagatatagatatagata-atagatagatggtggataga----tagagagacagacgatagaga----gacagataaatgacac--agagatacagattacagatag----ataattgatagactgacaggtagta---------------------------gatagatagatcgatcgatagat----------------a-atggat--------------------------agaAATGTGCAGAAGGTTATGAACAAGACAGAAAGTGAGAAActcagaattaaagaaaaaggaagatcaaGTCAA-CAATCCAAGGAGggtcagagagaagaaaacaataaaaaaagggaaaacacacCTCAGGCTGGGGAAGTGAGGTCAGAGAcctagagagacagagaaggtggaaggaggaaacagacatgaagagagac-------------------------------------------------------------------ggggtggagggtgagagacagagagag------cattaggtca-tagatcagagg-agtgagTTCTCAGCTCAGATGTGAGGGGAGCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47485923 441 + 50890351 -----------agaca--gatgatacacagatatagata-------atagatagatggtggataga----tagagagacagacaattgatagagagatagatacatgatac--atagatatagattacagatag----ataattgatagattgacaggtagta---------------------------gatagatcgatcaatcgatagat----------------a-atagat--------------------------agaAATGTGCAGAAGGTTATGAACAAAACAGAAAGTGAGAAACTCAGAATTAAAGAAAAAGGAAGATCAAGTCAA-CAATCCAAGGAGGGTCAGAGAGAAGAAAACAATACAAAAAGGGAAAACACACCTCGGGCTGGGGAAGTGAGGTCAGAGACCTAGAGACACagagaaagtggaaggaggaaacagacaagaagagagaC-------------------------------------------------------------------GGGGTGGAGGGT--G----ACAGAGAG------CATTAGACCA-TAGAGCAGGGC-AGGGAGTTCTCAGCTCAGATGTGAGGGGAGCTG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19893876 0 - 122678785 C e calJac3.chr22 45771743 617 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M a score=46989.000000 s hg38.chr19_GL949747v2_alt 500850 24 + 729520 TGACAAGGAAGAACC--TCCCTGAGG s panTro4.chr19 59771977 24 + 63644993 TGACAAGGAAGAACC--TCCCTGAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56690533 24 + 60714840 TGACAAGGAAGAACC--TCCCTGAGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60526698 24 + 64156825 TGACAAGGAAGAACC--TCCCTGAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55641868 24 + 59248254 TGACAAGGAAGAACC--TCCCTGAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47768229 24 + 51301725 TGACAAGGAAGAACC--TCCCTGAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47486364 24 + 50890351 TGACAAGGAAGAACC--TCCCTAAGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19893876 22 - 122678785 AGACAAGGCTGGACCAACCCTT---- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45771743 617 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M a score=652005.000000 s hg38.chr19_GL949747v2_alt 500874 325 + 729520 AAACTGCCTCTTCTCCTTCCAGGT---CTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCAGGCAGGAGAGAACGTGACCTTGTCCTGTAGCTCCTGGAGCTCCTATGACATCTACCATCTGTCCAGGGAAGGGGAGGCCCATGAACGTAGGCTCCGTGC-----AGTGCCCAAGGTCAA--CAGAACATTCCAGGCAGACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGCCCTGCCCTGCGTGTGGTCAAACTCAAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAAA s panTro4.chr19 59772001 325 + 63644993 AAACTGCGTCTTCTCCTTCCAGGT---CTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACAGTTCAGGCAGGAGAGAATGTGACCTTGTCCTGCAGCTCCCGGAGATCCTATGACATGTACCATCTATTCAGGGAGGGGGAGGCCCATGAATGTAGGCTCCGTGC-----AGTGCGCAAGGTCAA--CAGAACATTCCAGGCAGACTTTCCTCTGGGCCCTGCCA------CCCACAGAGGGACCTACAGATGCTTCGGCTCTTTCCGTCACTCTCCCTACGAGTGGTCAGACCCGAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56690557 325 + 60714840 AAACTGCCTCTTCTCCTTCCAGGT---CTATATGAGAAACCTTCTCTCTCAGCCCAGCCTGGCCCCACAGTCCAGGCAGGAGAGAATGTGACCTTGTCCTGCAGCTCCCGGCGCTCCTTTTACATGTACCATCTATCCAGGGAGGGGGAGGCCCGTGAATATAGGCTCCCTGC-----AGTGCCCAAGGTCAA--CGGAACATTCCAGGCCGACTTTCCTCTGGGCCCTGTCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCCCTGAACCTCCCTACATGTGGTCAAACTCGAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60526722 325 + 64156825 AAACTGCCTCTTCTCCTTCCAGGT---GTATATGAGAACCCTTCTCTCTCAGCCCAGCCGGGCCCCACAGTGCAGGCAGGACAGAACGTGACCTTGTCCTGCACCTCCCAGACCTCGTTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCAATGAACTTAGGCTCCCTGC-----AGTGTCAAGTGTCAA--TGGAACTTTCCAGGCCAACTTCCTTCTGGGCCCTGCCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTACCGTGACTCTCCCTATGAGTGGTCAGACCCGAGTGACCCACTGTCCGTTTCCGTTACAGGTGAGGAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55641892 325 + 59248254 AAACTGCCTCTTCTCCTTCCGGGT---CTATACAGGAAATGTTCTCTCTCAGCCCAGCCGGGCCCCACTGTTCATGCAGAAGAGAACATGACCTGATCCTGCAGCTCCCGGAGCTCCTTTGACATGTACCATCTATCCAGGGAAGGGGAGGCCCATGAACTGAGGCTCCCTGC-----AGTGCCGAGGGTCCA--TGGAACATTCCAGGCCGACTTCCCTCTGGAGCCTGCCA------CCCACGGAGGGACGTTCAGATGCTTTGGCTCTTTCCGTGACTCTCCCTATGAGTGGTCAGACCCGAGTGACCCACTGCCCATTTCTGTCACAGGTGAGGAAA i macFas5.chr19 C 0 I 7992 s papAnu2.chr19 47768253 325 + 51301725 AAACTGCCTCTTCTCCTTCCAGGT---CTATATGAGAAACCTTCTCTCTCAGCCCAGCCAGGCCCCATGGTTCAGGCAGGAGAGAACGTGACCTTGTCCTGCAGCTCCCAGAACTTGTTTGACGTGTACCATCTATCCACGGAGGGGGAGGCTCGTGAACTTAGTCTCTCTGC-----AGTGCCAAGCGTCAA--TGGAACATTGCAGGCCACCTTCCCTCTGGGCCCTGCCA------CCCATGGAGGAACCTACAGATGCTTTGGTTCTTTCCGTACCACACCCTACAAGTGGTCAAACTCGAGTGACCCTCTGGCTGTTTCggtcacaggtgaggaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47486388 325 + 50890351 AAACTGCCTCTTCTCCTTCCAGGT---ATATATAAGAAACCTTCTATCTCAGCCCAGCCAGGCCCCACGGTGCAAGCAGGAGAGAACCTAACCTTGTCCTGCAGCTCCCAACGCCGCTTTGACATGTACCATCTATCCAGGGAGGGGGAGACCCATGAACTTAGGCTTCCTGC-----AGTGCCAAACATCAA--TGGAACATTCCAGGCCAACTTCCCTCTGGGCCCTGTGA------CCCACGGAGGAACCTACAGATGCTTCGGTTCTTTCCATACCACACCCTACCAGTGGTCAGTCCCAAGTGACCCACTGCATGTTTCTGTCACAGGTGAGGAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772360 329 + 49145316 AATCAGCCTCTTTTCCTCCCAGGA---AAACACAAAAAGCCTTCTCTCTCCACCCAGGAGGACCCCAGGATGGGGAGTGGAGAGAACGTGACGTTATTCTGCATCTCTGAAATCTCATTTGACCGGTACCATCTGTGGAGAGAGGGGGCTCCTTATGGCCAGTGGCTCAGTGG-----AGGTCAGGGACACAG--GGGAGCATTCCAGGCCAACTTTTCTGTGGGCCTCGCAACGCCAGCCCATGGAGGGACCTATAGATGCTACGGTTCTTTCAATGCCTCCCCCTATGAGTGGTCGGCCCCCAGTGAGCCCCTGCACCTTTCTGTCACAGGTGAGGA-- i calJac3.chr22 I 617 C 0 s canFam3.chr1 19893898 333 - 122678785 -ACCTACCCTTCCTCTCTCTAGGACAGCTCTCCTATACACCCTCCTTACGGGTGCATCCAGGACCCACGGTGGCCCCAGGAGAGAATGTGACCCTGCTGTGTCAGTCACTGAGCAATGTGGACACATTCCTTCTGTCCAAGGATGGGGCAGCTGAT-------GCCTCCTTGCGTCTTAGATCGAAGTACCGAGCTGGGAAGTACGAGGCTGAATTCTCCATGAGTCCTGTGACCCCAGCCCATGGGGGGACCTACAGGTGCTACGGCTCTATCAAAACCTCTCCCTACCTGTTGTCATACCCCAGTGTCCCCGTGGAGATCCTGGTCTCAGGTGAGTAGC i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103239075 8807 - 106955855 M a score=49806.000000 s hg38.chr19_GL949747v2_alt 501199 36 + 729520 ----ACCCGTGTCTGTCCCATGTCTTA----T---------GATCCTAGAGCC s panTro4.chr19 59772326 36 + 63644993 ----GCCCATATCTCTCTCATGTGCTA----T---------GATCCTAAATCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56690882 36 + 60714840 ----ACCTGTGTCTGTCCCATGTCTTA----T---------GATCCTAGAGCC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60527047 36 + 64156825 ----GCCCATGTCTGTCCCATGTCTTA----T---------GACCCTAGAGcc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47768578 36 + 51301725 ----ccccATGCCTGTCCCATGTCTTA----T---------GATCCCAGAGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47486713 36 + 50890351 ----CTCCATGCCTGTCCCATGTCTTA----T---------GATCCCAGAGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772689 45 + 49145316 ----GCCCACACCTGCCACCTGTCCTG----TTGTCCACTAAGTCCCAGAGCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19894231 44 - 122678785 CCTTGCCCCTGTCCCCTCCATGTGCTAACATT---------GTTCTCAGGGCC i canFam3.chr1 C 0 N 0 e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55642217 7992 + 59248254 I a score=6146.000000 s hg38.chr19_GL949747v2_alt 501235 3 + 729520 ATA s panTro4.chr19 59772362 3 + 63644993 TTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56690918 3 + 60714840 ATA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60527083 3 + 64156825 ata i rheMac3.chr19 C 0 I 159 s papAnu2.chr19 47768614 3 + 51301725 ATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47486749 3 + 50890351 ATA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772734 3 + 49145316 ATA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19679137 3 - 122678785 ATA i canFam3.chr1 N 0 C 0 e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55642217 7992 + 59248254 I a score=259031.000000 s hg38.chr19_GL949747v2_alt 501238 309 + 729520 GCTGAGGAGCTTCCTGCCGA------------------------TGATGGGGAGAAGCATGGACAGATGCAGAGA-GAACACGAAGACTGGGTGTGAAGGGGGGGTCAGGGTGCAGGATGGCAGACAGGGCACCTCCAAACCCTCTTGCATGGCCTGCATGGAGGCCC-ATGGTCAGGGCTCCAGGCACCCAGGCAGA-TGGAGAAAGCGGTCAGGACAGACCCAGA-GAAGGGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAGCCCATCCTGGCCTCTCACCCACACAGAGAGATGTC s panTro4.chr19 59772365 309 + 63644993 GCTAAGGAGCTTCCTGCTGA------------------------TGATGGAGAGAAGCATGGACAGATGCAGAGA-GAAGACGCAGCATGGGTGTGAGGGCGGGGTCAGGGTACAGGATGGCAGACAGGGCACCTCCAAACCCTCCTTCATGGCCTGCATGGAGGCCT-CCGATCAGGGCTCCAGGCACCCAGGCAGA-TGGAGAAAGCAGTCAGGACAGACCCAAA-GAAGGGGAGACTGGGCTTAGTTTGGGGAGATCAGAGCTTCCCTCAGCCCCTCAATCTTACCCA-TTTCCCAGAAGCCCATCATGGCCTCTCACCCACACAGAGAGATATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56690921 307 + 60714840 GCTGAGGAACTTCCTGCTGA------------------------TGATGGATAGAAGGATAAACAGATGCAGAGA-GAACACGAAGCCTGGGTGTGAGGGCGGGGTCAGGGCGCACGATGGCAGACAGGGCAACTCCAAACCCTCCTGCACGGCCTGCATGGAGGCCC-ATGGTCAGGGCTCCAGGCACCCAGGCAGA-TGGAGAAAGCAGTCAGGACAGACCCAGA-GGAGGGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAGCCCCTCCTGGACTCTCATCCACAC--AGAGATGTC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47768617 304 + 51301725 GCTGAGGAACTTGCTGCTGA------------------------TGATAGAAAGAAGCACGGACAGGTTCAGAGA-GAAGACCAAGCTTCGGTGTGAGGGCGGGATCAGGATGCAGCATGGC--AGAGGGCACCTCCAAACCCTCCTGCATGGCCTGCGTGGTGGTCC-GCGGTCAGCGCTGCAGGCACCCaggcaga-tggagaaactggTCAGGACAGACCCAGA-GGA-GGCAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAGCCCATCCTGGCCTCTCACCCACAC--AGACATATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47486752 306 + 50890351 GCTGAGGAACTTCCTGCTGA------------------------TGATGGAGAGAAGCATGGACAGGTTCAGAGA-GAAGACCAAGCTTCGGTGTGAGGGCGGGATCAGGACGCAGGATGGCAGAGAGGGCACCTCCAAACCCTCCTGCATGGCCTGCGTGGTGGTCC-GCAGTCAGGGCTCCAGGCACCCAGGCAGA-TGGAGAAACTGGTCAGGACAGACCCAGA-GGA-GGGAGACTGGGCTCAGTTTGGGGAGATCAGAGATTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAACCCATCCCGGCCTCTCACCCACAC--AGACATATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772737 293 + 49145316 CCAGAGGGGCATCCCACTGGGCACACAGGGGCATTAGGTATTCTGGACAAAATGAAGCAGTGAAAAATACAGACAGGGATGAACAGGCTGAGTGGGATGGGGCTGTCAGGGTGCAGGGC-ATAGACAGGGCAGCTCTGCGCCCTCC------------------GCCC-----------CTCC-----------TACA-TGAAGAAAGAGGTCAGGGCAAACACAGGTGGAGGTGAGGCCAGATGGAGTTTGTTGAGATCAGAGGTTGCCTCAGCCCCTCGCCCTTTTCCATTTTCTCCGAAGCCCCTCCTGACCCCTCA-CCACAG--AGAGATTTC i calJac3.chr22 C 0 I 78353 s canFam3.chr1 19679140 254 - 122678785 ----GGGCAGTGCTAGCCTG------------------------GGATGGGAGTGAGGGGTCACAGAATTAG-GA-GATCATCCAG-----------AGGGGACCTCAGCTCTCAGGGGGATAGTCAGGACAACACCATCCCTGACTTCTCCCCTTCCCTTGAGGCCCTGTAGTGA-----CAGGGGAGTGATGTAGACTGGAGAGGAC--TCAGGGCTGAC----A-GAAGGGAAGA-----------------AGGCCAGAGGCCCTTCCCG---CTCATTCTCCTCCA-GTCTCCAG----TCCTAGGAGCCGCTCCTCC------GGAGACACC i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55642217 7992 + 59248254 I e rheMac3.chr19 60527086 159 + 64156825 I a score=10390.000000 s hg38.chr19_GL949747v2_alt 501547 8 + 729520 ATCACCAG s panTro4.chr19 59772674 8 + 63644993 ATCACCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56691228 8 + 60714840 ATCACCAG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47768921 8 + 51301725 ATCACCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47487058 8 + 50890351 ATCACCAG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19679394 8 - 122678785 AACACCAG i canFam3.chr1 C 0 N 0 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55642217 7992 + 59248254 I e rheMac3.chr19 60527086 159 + 64156825 I a score=67764.000000 s hg38.chr19_GL949747v2_alt 501555 88 + 729520 CAACCCCTACACTCTTTTCTTTTCATTTTCAAAAATAtttattgaggttaaatgtaactatataatttaccaactttaccatttttaa s panTro4.chr19 59772682 88 + 63644993 CAACCCCTACACCCTTTTCTTTTCATTTTCAAAAATAtttattgaggttaaatgtaactatataatttaccacctttaccatttttaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56691236 88 + 60714840 CAACCCCTACACCCTTTTCTTTTCATTTGAAAAAATATTTATTGAAGTTAAATATACCTATATAATTTACCAACTTTACCATTTTTAA i ponAbe2.chr19 C 0 T 96752 s papAnu2.chr19 47768929 88 + 51301725 CAATCCTTAcacccttttcttttcatttgaaaaaatatttgttaaggtTAAATATACCTATAAAATTGACCATCTTTACCGTTTTTAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47487066 88 + 50890351 CAACCCTTACACCCTTTGCTTTTCATTTGAAAAAATATTTGttgaggttaaaaatacctataaaattgaccacctttaccatttttaa i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55642217 7992 + 59248254 I e rheMac3.chr19 60527086 159 + 64156825 I a score=26293.000000 s hg38.chr19_GL949747v2_alt 501643 34 + 729520 aagtaaaatctagtggtcataaatacctttataT s panTro4.chr19 59772770 34 + 63644993 aagtaaaatctagtggtcataaatacctttataT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594572 34 + 60714840 aagtaaaatctagtggtcataaatacctttataT i ponAbe2.chr19 T 96752 C 0 s papAnu2.chr19 47769017 34 + 51301725 GTGTAAAGACTAGTGGtcataaatacattcatat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47487154 34 + 50890351 gtgtaaagtctagtggtcataaatacatttatat i chlSab2.chr6 C 0 T 60271 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55642217 7992 + 59248254 I e rheMac3.chr19 60527086 159 + 64156825 I a score=2566.000000 s hg38.chr19_GL949747v2_alt 501677 4 + 729520 gctg s panTro4.chr19 59772804 4 + 63644993 gctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594606 4 + 60714840 gctg i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47769051 4 + 51301725 tctg i papAnu2.chr19 C 0 T 21218 s chlSab2.chr6 47426917 4 + 50890351 gccg i chlSab2.chr6 T 60271 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55642217 7992 + 59248254 I e rheMac3.chr19 60527086 159 + 64156825 I a score=227052.000000 s hg38.chr19_GL949747v2_alt 501681 305 + 729520 ggtgtggtggttcacggttgtaatcttggcgctttgagaggccaagaaaggtggatcatttaagatcagggactcgagatcagcctggccaacatgcgggaaattcatctttactaaacagac-aagaaaaattagccaagcatgccggcatgcacctgtagtcctagctacttgggaggctgaggcaggagaagcacttaaagccaggaggcagaggttgcactgagccgagatcatgccactgcactgcagcctgggagacagagagagactctgtttctaa----ataaataaaTACATCTATATTC s panTro4.chr19 59772808 305 + 63644993 ggtgtggtggttcacggttgtaatctccgcactttgagaggccaaggaaggtggatcatttaagatcaggaactcgagatcaccctggccaacatgtgggaaattcatctttactaaacagac-aagaaaaattagccaagcatgccggcatgcacctgtagtcctagctacttgggaggctgaggcaggagaagcacttaaacccaggaggcagaggttgcactgagccgagatcatgccactgcactgcagcctgggagacagagagagactctgtttctaa----ataaataaaTACATCTATATtc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594610 305 + 60714840 ggtgcagtggctcatggttttaatcttggcgctttgagaggccaaggaaggcggatcatttaagatcaggggctcaagatcagcctggccaacatgtgggaaattcatctttactaaacagac-aagaaaaattggccaggcatgctggcctgcacctgtagtcctagctacatgggaggttgaggcaggagaagcacttaagcccaggagacagaggttgcactgagccgagatcatgccactgcactgcagcctgggagacagagagagactctgtctctaa----ataaataaaTACATCTATATTC i ponAbe2.chr19 C 0 I 42218 s papAnu2.chr19 47747837 309 + 51301725 ggtgcagtggctcacgcttgtaatctcagcaatttgagaggccaaggcaggtagatcattcaAAATCAGGGgctggagacaagcctggccaacatgggggaaacccatttttactaaaaagatgaaaaaaaattaaccaggcatagtaccacatgcctgtaatcccagctacttgggaggctgaggtaggagaaccgcttaagcccaggaggcagaggttgcagtgagccgagatcatgccactgcactgcagcctggt-gacacacagagactctgtctctaaatagataaataaataaatttatattc i papAnu2.chr19 T 21218 C 0 s chlSab2.chr6 47426921 309 + 50890351 ggtgcagtggctcatgcttgtaatctcagcaatttgagaggccaaggcaggtagatcattcaaaatcaggggctggagacaagcctggccaacatgggggaaacccatctttactaaaaagatgaaaaaaaattaaccaggcatagtgccacgtgcctgtaatcccagctacttgggaggctgaggcagcagaaccgcttaagcccaggaggcagaggttgcagtgagccgagatcatgcctctgcactgcaacctggt-gacacacagagactctgtctctaaatagataaataaataaaTTTGTATTc i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55642217 7992 + 59248254 I e rheMac3.chr19 60527086 159 + 64156825 I a score=280163.000000 s hg38.chr19_GL949747v2_alt 501986 359 + 729520 TTTTTTTTGttaccctccacccttcccttcctggcctctggtatccaccattctattctctaccttcatgagatccaccttttatctcctgcatgtgg-tgagaaatgggaatctttgtaatgacctccagttccatccatgtggctgcaaatgacaggatgttattgtttctatggatgagtagtctccaccgtgtgtgtgtactacagt-tctctatccattcacccactgataggcaggtaggttgactccacatcttggctactgtgaacagtgctggaacagtcatatgagtgcagatatcacttcgatacactgatgtcctttcctttggatataaacccagtagtgaaattgct s panTro4.chr19 59773113 360 + 63644993 ttttttttgttaccctccacccttcccttcctggcctctggtatccaccattctattctctaccttcatgagatccaccttttatctcctgcatgtgggtgagaaatgggaatctttgtaatgacctccagttccatccatgtggctgcaaatgacaggatgttattgtttctatggatgagtagtctccaccgtgtgtgtgtaccacagt-tctctatccactcacccactgatgggcaggtaggttgactccacatcttggctactgtgaacagtgctggaacagtcatatgagtgcagatatcacttcaatacactgatgtcctttcctttggatataaacccagtagtgaaattgct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56637133 360 + 60714840 tttttttttttAccctccacccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgtatatgggggagaaataggaatctttgtaatgacttcgagttccatccatgtggctgcgaatgacaggatgttattctttctatggatgagtagtctccactgtgcgtatgtactacagt-tctctatccattcacccactgatgggcaggtaagttgactccacatcttggctacggtgaacagtgctgcaccaatcatacgagtgcagatatcacttcgatatattgatttcctttcctttggatataaacccagtagtgaaattgct i ponAbe2.chr19 I 42218 C 0 s papAnu2.chr19 47748146 361 + 51301725 tttttttggtTACCCTCCATCCTTTCCTTCCTAACCTCTGGCatccaccattctactctctaccttcatGAGCTTCACATTTTACATCCTGCAGGTTAGTGAGAAATGGCATTCCttgtaatgacctccagttccacccatgtggCTGCAAATGTCAGGATGTTATTGTCTCTCTGGATGAGTAGTCTCCACTGTGTGTATGTACTACATTCTCtctatccattcacccactgatgGGCAGGTAGGTTGACTCCACATCTTGACTACTGTGAATGGTGCTAGAACAgtcatgggagtgcagatgtcaCTTTGATACACTGAAGTCCTTTCCTTTGCGTTTACACCCActagtggaattgct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47427230 360 + 50890351 ttttttttgttaccctccatcctttccttcctaacctctggcatccaccattctactctctaccttcatgagcttcaccttttatatcctgcaggttagtgagaaatggcaatccttgtaatgacctccagttccacccatgtggttgcaaatgtcaggatgttactgtctctatggatgagtagtctccactgtgtgtatgtactacattctctctatccattcacccactgatggacaggtaggttgactccacatcttggctactgtgaatggtgctagaatagtcatgggagtgcagatgtcactttgataca-tgaagtcctttcctttgcatttacacccactagtggaattgct i chlSab2.chr6 C 0 I 60475 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55642217 7992 + 59248254 I e rheMac3.chr19 60527086 159 + 64156825 I a score=166756.000000 s hg38.chr19_GL949747v2_alt 502345 469 + 729520 ggacactatgaaagttctc--tttttttttttt---------------cttttttgagaaagagtttccctcct-tagtccaagctggagtcaaagtggtgcgatcttggctcattgcaacctctgcttcctaggttcaaacgattctcctgactcagcctccctaatagctgtgattacaggtgcacgccaccatgcctgactaattcttgtattttttagcacagacgggatatcccaattttgggcaggctgctctcaaactcctgacctcaagtgaggtgcctgcctcggtttcccaaagtgctgaagttacaggcataagccactatgcccagcctccttttagttttttaaagtttttccatacttttctcc---ataatagttgtactaatttacattcctaccaacagggtaccagggttctcctttctctaccatcttgccagcatttgttttgcctgtcttgcagataaaagccatttta s panTro4.chr19 59773473 472 + 63644993 ggatactatgaaagttctc--ttttttttttttt------------ttcttttttgagaaagagtttccctcct-tagtccaagctggagtcaaagtggtgcgaccttggctcattgcaacctctgcctcctgggttcaaatgattgtcctgactcagcctccctagtagctgtgattacaggtgcacgccaccatgcctggctaatttttgtattttttagcactgacgggatttcccaattttggccaggctgctctcaaactcctgacctcaagtgaggtgcctgcctcggtttcccaaagtgctgaaattacaggcataagccactatgcctatcctctttttagttttttaaagaatttccataattttctcc---ataatagttgtacaaatatacactcctaccaacagggtaccagcgttctcctttctctaccatcttgccagcacttgttttgcctgtcttgcagataaaagccatttta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56637493 473 + 60714840 ggatactatgaaagtttttcgtttgttgtttttg------------tttttgtttttgagacactttccctctg-t-gcccaggctggagtacaagtgatgtgatcttggctcattgcaacctccgcctcctgggttcaaacgattttcctgcctcagcctccttagtagcagggattacaggtgcacacccccatgcctggctactttttcttttttttagtatagatggggtttccccatgttggctgagctgctctcaaactcatgacctcaactgaggtgcccgcctcggtgtcacaaagtgctgggattacaggcatgatccaccgcacccaacctctttttagttatttaaaggacttccatacttttctcc---gtaatggctgtactaatttacactcctaccaacagggtaccagggttctcctttctctacccccttgccagcatttcttttgcctgtcttgcagctaaaagccatttta i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47748507 484 + 51301725 agatcctCTGGAAGTTCTC--tttttaggttttggtttatgctttttgtttttttgacaagaagtttcactcttgttgcccaggctggggtgtaa-tggcaccatctgggctcactgcaacctctacctccaggattcaagtgattctcctgcctcagcctcctgagtagttg-gattactggcacctgccaccacagctgcctaatttttgta-tttttagtagatacgggttttcaccgtgttggccaggctggtctcgaacccttggcatccagtgatccacccacttcagcctcccaaggtgctgggattacaagggtgagctgcagcacccagcctcttttta-ttttttgaggaacttccatattCTTCTCCTCTGTgaaagttgtactaatttatattcctgtcAACAGTGTATCAGGGTTCTCGTTTCTCCACCACCTTGTCAgtattttttttgtctgtctttgaaATAAAAGCCATTGTA i papAnu2.chr19 C 0 I 20744 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e chlSab2.chr6 47427590 60475 + 50890351 I e macFas5.chr19 55642217 7992 + 59248254 I e rheMac3.chr19 60527086 159 + 64156825 I a score=23367.000000 s hg38.chr19_GL949747v2_alt 502814 123 + 729520 cttta------tttattt-a-----------tttattt--atttatgttgagatggagtttcactcatagtcgcccaggctggagtgcaagggtgtgatctcggctcactgcaacctctgcctcccgcgttcaactgattctc s panTro4.chr19 59773945 130 + 63644993 ttttactttattttatttta-----------tttattt--atttatgttgagatgaagtttcgctcatactcgcccaggctggagtgcaatggtgtgatctcggctcactgcaacctccgcctcccgcgttcaagtgattctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56637966 142 + 60714840 ttttattttattttattttattttattttattttattttattttattttgagatggagtttcgctc-ttgtcacctaggctggagtgcagtggcgcgatctcagctcaccgcaacctccacctcccaggttccagtgattctc i ponAbe2.chr19 C 0 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e chlSab2.chr6 47427590 60475 + 50890351 I e papAnu2.chr19 47748991 20744 + 51301725 I e macFas5.chr19 55642217 7992 + 59248254 I e rheMac3.chr19 60527086 159 + 64156825 I a score=26944.000000 s hg38.chr19_GL949747v2_alt 502937 71 + 729520 ctgcctcagcctccaaagtagctgggattacaggcatgtgccaccacgcctagctaatttttgtatgttta s panTro4.chr19 59774075 71 + 63644993 ctgcctcagcctcccaagtagctgggattacaggcatgtgccaccacgcccggctaatttttgtatgtttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638108 71 + 60714840 ctgccccagcctcccgagtagctgggattacaggcacatgcaaccacgcccggctaatttttctatttttg i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47769735 71 + 51301725 CCGCCTCGCTCTccgaaactgctgggattacaggcatgagccaccatgcccagcctctttttagtttctta i papAnu2.chr19 I 20744 I 118 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e chlSab2.chr6 47427590 60475 + 50890351 I e macFas5.chr19 55642217 7992 + 59248254 I e rheMac3.chr19 60527086 159 + 64156825 I a score=22097.000000 s hg38.chr19_GL949747v2_alt 503008 107 + 729520 gtagagagggagtttctccatgttggtcaggctggt------ctcccgacctcaggtgatccgcccacctccgcctcccaaagtgctggaattacaggcgtgagccac------cggcc s panTro4.chr19 59774146 107 + 63644993 gtagagacgtagtttctccatgttggtgaggctggt------ctcccgacctcaggtgatccgcccacctccgcctcccaaagtgctggaattacaggcgtgagccac------cggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638179 119 + 60714840 gtagagacagtgtttctccatgtgggtcaggctggtctcaaactcccgacctcaggagattcgcccacctcaggctctcaaagttctaggatgatagaggtgagccaccacgctcggcc i ponAbe2.chr19 C 0 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e chlSab2.chr6 47427590 60475 + 50890351 I e papAnu2.chr19 47769806 118 + 51301725 I e macFas5.chr19 55642217 7992 + 59248254 I e rheMac3.chr19 60527086 159 + 64156825 I a score=546.000000 s hg38.chr19_GL949747v2_alt 503115 1 + 729520 t s panTro4.chr19 59774253 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638298 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60527245 1 + 64156825 t i rheMac3.chr19 I 159 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e chlSab2.chr6 47427590 60475 + 50890351 I e papAnu2.chr19 47769806 118 + 51301725 I e macFas5.chr19 55642217 7992 + 59248254 I a score=4766.000000 s hg38.chr19_GL949747v2_alt 503116 7 + 729520 aaaaggc s panTro4.chr19 59774254 7 + 63644993 aaaaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638299 7 + 60714840 aaaagcc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60527246 7 + 64156825 aaaagcc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47769924 7 + 51301725 aaaaacc i papAnu2.chr19 I 118 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e chlSab2.chr6 47427590 60475 + 50890351 I e macFas5.chr19 55642217 7992 + 59248254 I a score=511036.000000 s hg38.chr19_GL949747v2_alt 503123 491 + 729520 attttaatgggatgagatgaaaactcatcgcga-ttgtaatttacatttctgtgatgatgagtgatgctgagcactttttcatatacgtgatcgccatttctatgttttgtttgtggagaaatgtctcctcatgtcttttgctcgttttttaattaaa----ttgttttattgagttgtttgagcttcttatatttccagttattaatcccatctcagatgaatagtttgcaaatatttgctcctattttgtgggttgtctcttcactttgttggtttatc-tttggtggtgcagaagttgcttggtttgatgtaat-cctaatggtctattttttgctttgattacttgtgttttgaaggttttaaacaaaatgtctttcgtcagacaaatgtc---------ttccccattattttcttctacatgtttcataggttcaggccttagactcatgtttttaatccattttcatttgatttttgtgtaaggtgacaggtatagatgc s panTro4.chr19 59774261 488 + 63644993 attttaatgggatgagatgaaaactcatcgcga-ttttaatttacacttctgtgatgatgagtgatgctgagcactttttcatatacgtgatcgccatttgtatgttttgtttgtggagaaatgtctcctcatgtcttttgctcattttttaattaaa----ttgtttt---gagttgtttgagcttcttatatttctagttattaatcccatctcaggtgaatagtttgcaaatatttgctcctattttgtgggttgtctcttcactttcttggtttatc-ttttgtggtgtagaagttgcttggtttgatgtaag-cctaatggtctattttttgctttgattacttgtgctttgaaggttttaaacaaaatgtctttcctcagacaaatgac---------ttccccattattttcttctacatgtttcataggttcaggccttagactcatgtttttaatccattttcatttgatttttgtgtatggtgacaggtagaggtgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638306 471 + 60714840 attttaatggggtgagatgaaaactcacttcga-ttttcatttgcatttctctgatgatgagtgatactgagcacttcttcata----------------------------tgcggggaaat-----ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttgtttgagcttcttatatttctagttattaatcccgtctcagatgcatagtttgcacatatttactcccaatgtgtgccttgtctcttcacgttgttggtttatc-tttagtggcgcagaagttgcttagtttgatgtaat-cccaatggtctattttttgctttgattacttgtgttttgaaggtttaaaacaaagtgtctttcttcagacaaatgtcctggagcatttccccaatattttcttctacgtgtttcataggttcagcccttagactcacatctttaatccattttcatttgatttttgtgtatggtgacaggtagaggtgc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60527253 503 + 64156825 attttaatggggtgagatgaaaattcattgtga-ttttaatttgcatttctctgatgatgagtgaaactgaacactttttcacacacatgatggtcatttatatgttttgtttgtggagaaatgtctgttcaagtcttttgctcattttttagttaaat--tttactttattgagttatgtgatcttcttatatttctagttattaatcctgtctcagatgcatagtctgcaaatattggctcccattctgtgggttgtctcttcactttgttgtttgcttgttttgcagtacagaagctgcttagtttgatgtaat-cccaatggtctgtttattgctttgattatttgtgtttttgaggtttcaaacaaaatgtctcttctcagacaaaggtcctgaagcacttcctcaatattttcttctacgtgtttcataggttcaggccttagactcatgtatttattccattttgatttggtttttgtggatgatgagacgtagagctgc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47769931 504 + 51301725 attttaatggGGTGAGATGAAAATTCATTgtgatttttcatttgtatttctctgatgatgagtgatacTGAACAC--TTTCATACACATGATGGCCatttatatgttttgtttgtggagaaatatctcttcatgtcttttgctaattttttagttaaattatttgttttattgagtTATGTGAGCTTCTTGTATTTCTAGTTATAAATCCCgtctcagatgcatagtttgcaattattggctcccattctgtgggttgtctcttcactttgttggttattggttttgcagtgcagaagctgcTTAGTTGGATATAAT-CTCTGTGGTCTGTTTTTTGCTTTGATTACTTGTGTTTTTGAGGTTTTAaacaaaatgtcttttctcagacaaatgtcctgaagcatttccccaatattttcttctacatgTTTCATAGGTTCAGGACTTAGACTCCTGCATTTAATCTATTTGGATTTGTCTCTTCTGAATGGTGAGAGGAAGAGGTGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47488065 504 + 50890351 attttaatggggtgagatgaaaattcattgtgatttttcatttgtatttctctgatgatgagtgatactgaacac--tttcatacacatgatggccatttatatgttttgtttgtggagaaatgtctgttcaagtcttttgctcattttttagttaaattgtttgttttattgagttatgtgagcttcttatatttctagttat-aatcccgtctcagatgcatagtttgcaaatattggctcccattctgtgggttgtctcttcactttgttggttgcttattttgcagtgcagaagctgcttagtttgatgtaatcccctacggtccgttttttgctttgattactcgtgtttttgaggttttaaacaaaatgtcttttctcagaccgatgtcctgaagcatttccccaatattttcttctacatgtttcataggttcagggcttagactcatgtatttaatccatttggatttgacttttctgaatggtgagaggtagaggtgc i chlSab2.chr6 I 60475 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e macFas5.chr19 55642217 7992 + 59248254 I a score=464522.000000 s hg38.chr19_GL949747v2_alt 503614 296 + 729520 agttttattcctctgcatgtagatatccagttttccccacaccatttattgaa--gactgtcctttcttgattgtaagttctcggcacctttgtcaaagtccattaaatgggc----tgggcatggtggctcacacctgcaattccagcactttgggaggccgaggcgggtggatcacctaaagccaggagttcaagaccaggctggccaacagagtgaaacctcgtctctactaaaaatacaaaaattagctgagcatggtgatcagtgcctgtaataccactactcaggagtttgaagca s panTro4.chr19 59774749 298 + 63644993 agttttattcctctgcatgtagatatccagttttccccacaccatttattgaaaagactgtcctttcctgattgtaagttctcggcacctttgtcaaagtccattaaatgggc----tgggcgtggtggctcacacctgcagttccagcactttgggaggccgaggcgggtggatcacctaaagccaggagttcaagaccaggctggcgaacagagtgaaacctcatctctactaaaaatacaaaaattacctgagcatggtgatcagtgcctgtaataccactactcgggagtttgaagca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638777 298 + 60714840 agtttcattcttctgcatgtagatgtgcaggtttccctgcactgttgattgaaaagactgtcctttcctgattgtaagttcttggcacctttgtcaaagtccagtggatgggc----tgggcatggtggctaacacctgcaattgcagcactttgggagaccgaggcaggtggatcacctgaggccaggagttcaagatcagcctggccaacatggtgaaacatcgtctctactaaaaatacaaaaattagctgagcatggtggtcagcccctgtaataccactactcaagggtttgaggtg i ponAbe2.chr19 C 0 I 53815 s rheMac3.chr19 60527756 302 + 64156825 agtttcattcctctgcatggagataaccagttttccccacattgtttattgaaaagactgtcctttcctgattgtagcctcctggcacctttgtcaaaatgcattggattggcagagcgggcatggtggctcacacctgcagtcccagcactttcagaggccaaggtgggtagatcacctgagacgaggagtttgaggcccgcctggccaacatagtaaaaccctgtctccactaaaagtacaaaaattagcttagcattgtggtcagtgcctgtaataccactactcaagactctgaggca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55650209 297 + 59248254 agtttcattcc-ctgcatgcagataacccgttttccccgcatcgattattgaaaagactgtcgtttcctgattgtcggttcttgacacttttgtcaaaatgcattggattggc----tgggaatggtggctcacacctgcagtcccagcactttcagaggccaaggtgggtggatcacctgagaccaggagttccaggcccgcctggccaacatagtaaaaccctgtctccactaaaagtacaaaaattagctgagcatggtggtcagctcctgtcataccactactcaagagtctgaggca i macFas5.chr19 I 7992 C 0 s papAnu2.chr19 47770435 297 + 51301725 AGTTTCATTCC-CTGCATGCAGATAACCCATTTTCCCCACATCGTTTATTGAAAAGATTGTCCTTTCCTGATTGTAGGTTCTTGACACTTTTGTCAAAATGCATtggattggc----tgggcatggtggctcacacctgcaatcccagcactttcagaggccaaggtgggtggatcacctgagaccaggagttcaaggcccgcctggccaacatagtaaaaccctgtctccactaaaagtacaaaaattagctgaacatggtggtcaGCGCCTGTAATACCACTACTCGAGAgtctgaagca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47488569 297 + 50890351 agtttcattcc-ctgcatggagataacccgttttccctgcatcgtttattgaaaagactgtcctttcctgattgtaggttcttgacacttttgtcaaaatgcattggattggc----tgggcatggtggctcacacctgcaatcccaggactttcagaggccaaggtgggtggatcacctgagaccaggagttcgaggcccgcttggccaacatagtaaaaccctgtctccactaaaagtacaaaaattagctgagcatggtggtcaccacctgtaataccactactcaagagtctgaggca i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M a score=2066684.000000 s hg38.chr19_GL949747v2_alt 503910 1267 + 729520 agagaatttcttgaatccaggaagtggaggttgcattgagctgagattgcacctctacactccagcctgcatgacagagcaagattccatcacacacacaca-----------aaagaaagccattggatgtaaatgcatggattatatctgtgttctccattctgttccatt-ttttatgtgcctttctttatgccaatgtcatgctgttttgcttactacagctctgtaacatatttctaagtcaggtagtgtg-------------------atgctcctgttttctctttataccttcaagTCTCAAGACAGTGGGCATCGCACACAAAAATTATGGAGAAAAGGATCCCAAGACTCCCAGGGTCCAACATTAGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCATTGAGTAGAGGACAAGCACCCTCATTTCCTCACATCTCTCCTGTCCCGTGTTCTAGGAAACCCTTCAAGTAGTTGGCCTTCACCCACAGAACCAAGCTCCAAATCTGGTGAGTAAAGGACCCCTCTTATCTCTGCTTTTGGAAACCTGGGGAGGTggaagccttggatgcaagtgttggctcaa-acctcccagctctgtgaatgagggcctgtcttccacca--tctctgaactccagacactccaacagtgaaagggatCTAGGGCCACCAAAGGGCTCAGCGAAGTCTCTTTACCTTTAATTTCCTGCAGGTGAGACCTCCTACAAGCTAGAAGAATAATTGCCAATCTGACATCCTTCTCAGGAAAAATGCAGTGTTTTTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCCGGGGGCTTGAGAGAGGGAAGGGAAGGGAACATCTGATGAGGGTG-GGTGTTTTAGAGAAGTTCCACTTGCCAAGGAATGAATTACTGTTGGTCATCAGGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCCGTAACAGAGAACAGAGC---------TCATGCACGCACACTTCGACTCACTGACTCATTCAGCCACAGCCCCATGCTCAGGCTGTGCAGTGTGGAAGCTtttcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaacggttatttaattatcttacagtgctgtagctcaaagcatgacgtgcatgtcactgggctaaaatcaaggtgacagcaaggctgccttccctctgagggttccaggcaagaatctgcttctcacttttctcagcttctagaggctcccatgttccttggctcctggtacccttcctccttcctcaaa s panTro4.chr19 59775047 1267 + 63644993 agagaattgcttgaatccaggaagtggaggttgcattgagctgagattgcacctctgcactccagcctgcatgacagagcaagattccatcacatacacaca-----------caaaaaagccattggatgtaaatgcatggattatatctgtgttctccattctgttccatt-ttttatgtgcctttctttatgccaatgtcatgctgttttgcttactacagctctgtaacatatttctaagtcaggtagtgtg-------------------atgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGGGCATCACACACAAAAATTATGGAGAAGAGGATCCCAAGACTCCCAGAGTCCAACATTAGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCATTGAGTAGAGGACAAGCACCCTCATTTCCTCACATCTCTCCTGTCCCATGTTCTAGGAAACCCTTCAAGTAGTTGGCCTTCACCCACAGAACCAAGCTCTAAATCTGGTGAGTAAAGGACCCCTCTTATCTCTGCTTTTGGAAACCTGGGGAGGTggaagccttggatgcaagtgttggctcaa-acctcccagctctgtgaatgagggcctgtcttccacca--tctcggaactccagacactccaatagtgaaatggATCTAGGGCCACCAAAGGGCTCAGTGAAGTCTCTTAATCTTTAATTTTCTGCAGCTGAGACCTCCTACAAGCTAGAAGAATAATTGCAAATCTGACATCCTTCTCAGGAAAAATGCAGTGTTTTTTCTGCCTGCATTCCTTACTAGAGGACAAATTCCTGCGGGCTTGAAAGAGGGAAGGGAAGGGAACATCTGATGAGGGTG-GGTGTTTTAGAGAAGTTCCACTTGCCCAGGAATGAATTACTGTTGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCTGTAACAGAGAACAGAGC---------TCATGCACGCACACTTCGACTCACTGACTCATTCAGCCACGGCCCCATGCTCAGGCTGTGCAGTGTGGGACCTtttcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaacagttatttaattatcttacagtgctgtagctcaaagtatgaagtgcatctcactgggctaaaatcaaggtgacagcaaggctgccttccctctgagggttccaggcaagaatctgcttctcacttgtcccagcttctagaggctcccacattccttggctcctggtccccttcctccttcctcaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56692890 1281 + 60714840 agagaattgcttgaatccaggaggtggaggttgcattgagctgagattgcacctctgcactccagcctgcatgacagagcaagattccatcaca---aaaaa-----------aaaaaaaGCCAttggatgtaaatgcatggattatatctgtgttctccattctgttctatt-ttttatgtgcctttctttatgccaatgtcatgctgttttgcttactacagctctgtaacatatttctaagtcaggtagtgtgatactcctgttttctctttatactcCTGTTTTCTCTTTATACCTTGAAGTCTCAAGACAGTGGGAATCACACACAAAAATTATGGAGAAGAGGATCCCAAGACTCCCAGGGTCCAACATTAGATAACAGAATGTTGGCCATGAACCAACCTCAAAGATTTCCATCAAGTAGAGGACAAGCACCCTCATTTCCTCACATCTCTCCTGTCCCATGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACAGAACCAAGCTCCAAATCTGGTGAGTAAAGGACCCCTCTTATCTCTGCTTTTGGAAACCTGGGGAGGTggaagccttggatgcaagtgttggctcaa-acctcccagctctgtgaatgagggcctgtcttccacca--tctctgaactccagacactccaacagtgaaagggatCTGGGGCCACCAAAGGGCTCAGTGAAGTCTCTTAATCTTTAATTTTCTGCAGCTGAGGCCTCCTACAAGCTA-AAGAATAATTGCAAATCTGACATCCTTCTCAGGAAAAATGCAGTGTTTTTTCTGCCTGCATTCCTAACTGGGGGATAAATTCCTGGGGGCTT-AGAGAGGGAAGGGAAGGGAACATCTGATGAGGGTG-GGTGTTTTAGAGAAGTTCTACTTGCCAAGGAATGAGCTCCTGTTGATCATGAAGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCCGTAACAGAGAACAGAGC---------TCATGCACGCACACTTCGACTCACTGACTCATTCAGCCACAGCCACATGCTCAGGCTGTGCAGTGTGGAACCTtttcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaacagttatttaattatctttcagtgctgtagctcaaagtatgaagtgcatcttactgggctaaaatcaaggtgacagcaaggctgccttccccctgagggttccaggcaagaatctgcttctcacttttcccagcttctagaggctcccacattccttgactcctggtccccttcctccttcctcaaa i ponAbe2.chr19 I 53815 C 0 s rheMac3.chr19 60528058 1261 + 64156825 aaagaattgcttgaacccagtagacagaggttgttg-gaaccgagactgcacctctgcaatccagcctgagtaacagagcaagattccatctcaaaaa---------------aaagaatgccattgaatgtagatgcatgga-tatatctgtattctgcatttcattccattgttctatgcacctttccttatgccaacgtcatgctgttttgtttactacagctctgtaacacatttttaagtcaggtaatgag-------------------atgttcctgttttCTCTCTGTACCATAAACTCTCAAGACAATGGGAAACACATACAAAAATTATGGAGAAGAGGATCCCAGGACTCCCAGAGCCCAGTGTTGGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCCTTGAGTAGAGGACAGGCACCCTCATTTCCTCACCTCTCTCCCGTTTC-TATTCTAGGAAACCCTTCACGTAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCAGTGAGTAAAGAATCCCTCTTATCTCTGCTTTTGGAAACCTGgggaggtggaagccttggattcaagccttggctcagcacctcccagctc--tgactgtgggcctgtcttccaccatctctctgaactccagacactccaaaagcaaaagggatcttggcccagcacagggctccgtgaagtctcttcatctctaattttctgtAGCTGAGACCTCCTACAAGCTGGAAGAATGATTGCAAATCTGACATCCTTCTCAGGAAAAATGCAGTGTTTGTTCTCCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTTGAAAGAGGGAAGGGAAGGGAACATCTAATGAGGCCAAGGTGTTTTAGAGAAGATCCACTTGCCAAAGAATGAGCTCCTGTTGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTG-AGTAACAGAGAACAGAGCTCATGCACACCTTGCACGCACACTTCGACTCACTGACTCATTCAGCCATGGCCCCATGCTCAGGCCGTGCAGT-TAGAATCCttttctattgttgccataacaaatttccacaaaattggtggatgaaaacaaaacggctttttaattatcttacagtgctgtagctcaaaggatgaaatgcacctcactgggctaaaatcaaggtgacagcaaggctgccttccctccgaaggttccaggcgagaatctgct---------tcccagtttctagaggctcccacgttccttggctcctggtccccttcctccttcctcaaa i rheMac3.chr19 C 0 I 4 s macFas5.chr19 55650506 1265 + 59248254 agagaattgcttgaattcaggagacagaggttactgtgagccgagattgcacctctgcaccccagcctggttaacagagcaagattccatctcaaaaaaaaaaaaaagaaaagaaaaaaaaccattgaatgtagacggatagattatatctgtgttctgcatttcattccattgttctatgcacctttccttatgccaacgtcatgctgttttgtttactacagctctgtaacacatttttaagtcaggtaatgtg-------------------atgttcctgttttCTCTCTGTACCGTAAACTCTCAAGACAATGGGCAACACATACAAAAATTATGGAGAAGAGGATCCCAGGACTCCCAGAGCCCAGTGTTGGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCCTTGAGTAGAGGACAGGCACCCTCATTTCCTCACCTCTCTCCCGTTTC-TATTCTAGGAAACCCTTCACGTAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCAGTGAGTAAAGAATCCCTCTTATCTCTGCTTTTGGAAACCTGgggaggtggaagccttggattcaagccttggctcagcacctcccagctc--tgactgtgggcctgtcttccaccatctctctgaactccagacactccaacagcaaaagggatcttggcccagcacagggctccgtaaagtctcttcatctctaattttctgtAGCTGAGACCTCCTACAAGCTGAAAGAATGATTGCAAATCTGACATCCTTCTCAGGAAAAATGCAG----TGTTCTCCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTTGAAAGAGGGAAGGGAAGGGAACATCTAATGATGGTGAGGTGTTTTAGAGAAGTTCCACTTGCCAAGGAATGAACTCCTGTGGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCCAGAGCCTTGCAGTAA--------AGAG----------CCTTGCACGCACACTCCGACTCACTGACTCATTCAGCCATGGCCCCATGCTCAGGCTGTGCAGT-TAGAATCCttttctattgttgccataacacatttccacaaaattggtggatgaaaac-aaacggctttttaattatcttacagtgctgtagctcaaaggatgaaatgcacctcactgggctaaaatcaaggtgacagcaaggctgccttccctccgaaggttccaggcgagaatctgctcttcacatgtcccagtttctagaggctcccacgttccttggctcctggtccccttcctccttcctcaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47770732 1256 + 51301725 agagaattgcttgaattcaggagacagaggttgctgtgagccgagattgcacctctacactccagcttgggtgacagagcaagattccatctcaaaaaaa-------------caaaacagccgtTGAATGTAGACGCATAGATTATATCTGTGTTCTTCATTTTACTCCGTTGTTCTATGCACTTTTCTTTATGCCAAcgtcatgctgttttgtttactacagctctgtaacatatttttaagtcaggtaatgtg-------------------atgttcCTGTTTTCCCTCTATATCTTAAAGTCTCGAGACAATGGgtaacacatacaaaaattatggaGAAGAGGATCCCAGGACTCCCAGAGCCCAGTGTTGGATAACAGAGTGTTGGCCGTGAACCAACCTCAAAGATTTCCCTTGAGTAGAGGACAGGCACCCTCATTTCCTCACCTCTGTCCTGTCTC-TATTCTAGGAAACCCTTCAAGTAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCGGTGAGTAAAGAATCCCTCTTATCTCTGCTTTTGGAAACCTGGGGAGGTGGAAGCCTTGGATTCAAGCCTTGGCTCAGCACCTCCCAGCTC--TGATTGTGGGCCTGTCTTCCACCATGTCTCTGAACTCCAGACACTCCAACAGCAAAAGGGACCTTGGCCCAGCACAGGGCTCAGTGAATTCTCTTAATCTCTAATTTTCTGTAACTGAGACCTCCTACAAGCTGAAACAATGATTGCAAATCTGACATCCTTCTCAGGAAAAATGCAGTGTTTGTTCTCCCTGCATTCCTAACTGGAGGATGAATTCCT-GGGATttgaaagagggaaaggaagggaacaTCTAATGAGGCTGAGGTGTTTTAGAAAAGTTCCACTTGCCAAGGAATGAGCTCCTGTGGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCAGTAA--------AGAG----------CCTTGCACGCACACTTCGACTCACTGACTCATTCAGCCATGGCCCCAAGCTCAGGCTGGGCAGT-TAGAATCCTTTCCTAGTGTTGCcataacaaatttccacaaaattGGTGGATGAAAACAAAacgactttttaattattttacagtgCTGTAGCTCAAAGGATGAAATGCacctcactgggctaaaatcaaggtgacAGCAAGgctgccttccctctgaaggTTCCAGGCGAGAATCTGCTCTTCACATGTCCCAGTTTCTAGAAGCTCCCACGTTCCTTGGCTCCtggtccccttcctccttcctcaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47488866 1265 + 50890351 agagaattgcttgaattcaggagacggaggttgctgtgagacgagattgcacctctgcactccagcttgggtgacagagcaagattccatctcaaaaaaaaaaaaaaaa----aaaaaaagccgttgaatgtagacgtatagattatatctgtgttcttcatttttctccattgttctatgcatttttctttatgccaacatcatgctgttttgcttactacagctctgtaacatatttttaagtcaggtaatgtg-------------------atattcctgttttcttTCTATATCTTAAAGTCTCAAGACAAGGGGCAAAACATACAAAAATTATGGAGAAGAGGATCCCAGGACTCCCAGAGCCCAGTGTTGGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCCTTGAGTAGAGGACAGGCACCCTCATTTCCTCACCTCTCTCCGGTCTC-TATTCTAGGAAACCCTTCACGTAGTTGGCCTTCACCCACTGAACCAAACTCCAAAACCGGTGAGTAAA-AATCCCTTTTATCTCTGCTTTTGGAAACCTGGGGAGATggaagccttggattcaagccttggctcagcacctcccagctc--tgattatgggcctgtcttccaccatctctctgaactccagacactccaatagcaaaagggatCTTGGCCCAGCGCAGAGCTCCGTGAAGTCTCTTAATCTCTAATCTTCTGCAGCTGAGACCTCCTACAAGCTGGAAGAATGATTGCAAATCTGACATCCTTCTCAGGAAAAATGCAGTGTTTGTTCTCCCTGCATTCCTAACTAGAGGATAAATTCCTGGGGGCTTGAAAGAGGGAAGGGAAGGGAACATCTAATGAGGCCAAGGTGTTTTAGAGAAGATCCACTTGCCAAGGAATGAACTCCTGTGGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCAGTAA--------AGAG----------CCTTGCACGCACACTCCGACTCTCTGACTCATTCATCCATGGCCCCATGCTCAGGCTGTGCAGT-TAGAATCCtttcctattgttgccataacacatttccacaaaattggtggatgaaaacaaagcagctttttaattatcttacagtgctgtagctcaaaggatgaaatgcacctcactgggctaaaatcaaggtgacagcaaggctgccttccctccgaaggttccaggcgagaatctgctcttcacatgtcccagtttctagaggctcccacgttccttggctcctggtccccttcctccttcctcaaa i chlSab2.chr6 C 0 T 60299 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M a score=1794.000000 s hg38.chr19_GL949747v2_alt 505177 2 + 729520 gc s panTro4.chr19 59776314 2 + 63644993 ac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56694171 2 + 60714840 gc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55651771 2 + 59248254 ac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47771988 2 + 51301725 AC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47429832 2 + 50890351 gc i chlSab2.chr6 T 60299 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60529319 4 + 64156825 I a score=57739.000000 s hg38.chr19_GL949747v2_alt 505179 121 + 729520 ccacaaagactggtcaca--tctcacatggcatcactcagacccttcttccttaccacacctctttctctgaatgctgctctcccttcttccccttcttttgaaaacttggggattctattgg s panTro4.chr19 59776316 121 + 63644993 ccacaaaggctggtcaca--tctcacatggcatcactcagacccttcttccttaccacacctctttctctgaatgctgctctcccttcttccccttcttttgaaaacttggggattctattgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56694173 121 + 60714840 ccaaaaaggctggtcaca--tctcacatggcatcactcagacccttcttccttaccacacctctttctctgaatgctgctttcccttcttccacatgttttgaaaacttggggattctatcag i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47429834 123 + 50890351 ccacaaaggctggtcacatctctcatataacatcagtcagatccttcttccttaccacacctctttctctgaatgttgctctgccttcttcctcatcttttaaaggccttgggattctattgg i chlSab2.chr6 C 0 I 45680 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47771990 0 + 51301725 C e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529319 4 + 64156825 I a score=154408.000000 s hg38.chr19_GL949747v2_alt 505300 350 + 729520 gttcaccaagatgaaaatccatcataatctcccggaaatcatccaggataccctccttttaagttcagctgactagcaaccataattccatctgcaatcttcattcctccttt-catgt-aaaataacatattcacaagctatggaggctaggacatggacatttttggggtgggacaacattctcctgccttccacaAACAGTGAACAAGATGCATTTGGCCTCTGTTCTTGGGACACTGATCTTGCAGATGGTTAAATGGGAGGGCAGAAAATGTAGGCACAAGGGGACCAATAAATGAATGATCTATTGAGAAGCATCTGTGCATGAAATCTATTTATTTATGTATTTA s panTro4.chr19 59776437 346 + 63644993 gttcaccaagatgaaaatccatcataatctcccggaaatcatccaggataccctccttttaagttcagctgattagcaaccgtaattccatctgcaatcttcattcctccttc-catgt-aaaataacatattcacaagctatggaggctaggacagggacatttctggggTGGGGTGGCATTCTTCT----TCCACAAATAGTAAACAAGATGCATTTACCCTCTGTTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGTATGCACAAGTGGACCAATAAATGAATGATCTATTGAGAAGCATCTGTGCATGAAATCTATTTATTTATGTATTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56694294 344 + 60714840 gttcactaagatgaaaatccctcataatctcccggaagtc-tccaggatacccttgttttaagttcagctgattagcaactgtaattccatcagcaatcttcattcctccttt-catgt-aaaataacatattcacaagctatggagactaggacatggacatttttggggTGGGGTGGCATTCTTCT----TCCACAAATAGTAAACAAGATGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGACAG-AAATGCATGCACAGGTGGACCAATAAATAAATGATCCATTGAGAAGCATCGGTGCATGAAatctatttgtttatttattta i ponAbe2.chr19 C 0 T 53820 s chlSab2.chr6 47475637 348 + 50890351 gttcagcaagat---aatccatcatcatctccctaatatcatccaggataccctccttttcagttcagctgattagcaaccataattccatctgcaatcttcattcctcttttccatgtaaaaatcacatattcacaaggtgtgaaggctaggacagggacatttttggggtggggtgg-attctcctgccttccacaAATAGTAAACAGGATGCATTTGGCCTGTGCTCTTGGGACACTGACGTTGCAGATGGGTAAACGAGAGGAAAGAAAACGAATGCACAAGTGGACCTATAAATGGCTGATCTATTGGGAAATATCTGTGCATAAAATCtatttatttgtttattta i chlSab2.chr6 I 45680 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47771990 0 + 51301725 C e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529319 4 + 64156825 I a score=1206.000000 s hg38.chr19_GL949747v2_alt 505650 7 + 729520 CCTACtt s panTro4.chr19 59776783 7 + 63644993 CCTACTT i panTro4.chr19 C 0 C 0 s chlSab2.chr6 47475985 7 + 50890351 tttattt i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56694638 53820 + 60714840 T e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47771990 0 + 51301725 C e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529319 4 + 64156825 I a score=208327.000000 s hg38.chr19_GL949747v2_alt 505657 502 + 729520 ----------gtttattgagacggagccttgctctgtcgtccaggctagagtgcggtggcatgatctcggctcactgcaacctccacctcctgggctgaacgga-tctcctccctcagcctctccagtagctgggattacagaccacaaccaccacgcccggctaactctttttgcatattttctgtagagaggatgtttcaccatgttggccaggctggtctcaaattcccaacctcaggtgatccaatagcctctgcctcccaacacgctgggataagaggcatgagccacggggccaagccAAATTTTCAAATCAATAATAGATAATGCTGAGTGTATGATTTCAGGTGACAGAGAAGTTCTCACTAATCAGATATTTGTGACATTAATGAAAAACACGGATTGAACCCCTGAAAGATGGGCGGAAGGATTTTGCACACACAGCTGTCAGCCGTGAAGGCACAAAGGTGAAAATAATCTGATGTTGAAGGAAGAGGCTCTGC-CTCAAATG s panTro4.chr19 59776790 502 + 63644993 ----------Atttattgagacggagtcttgctctgtcatccaggctagagtgcagtggcatgatctcggctcaatgcaacctccacctcctgggttgaactga-tctcctccctcagcctctccagtagctgggattacagaccacaaccaccaagcccggctaactctttttgcatattttctgtagagaggatgttccaccatgttggccaggctggtctcaaattcccaacctcaagtgatccaatagcctctgcctcccaacccgctggggtaagaggcatgagccacGGGTCCAAGCCAAATTTTCAAATCAATAATAGATAATGCTGAGTGTATTATTTCAGGTGACAGAGAAGTTCTCACTAATCAGATATTTGTGACATTAATGAAAAACACGGATTGAACCCCTGAAAGATTGGCGGAAGGATTTTCCACACACAGCTGTCAGCCGTGAAGGCACAAATGTGAAAACAATCTGATGTTGAAGGAAGAGGCTCTGC-CTGAAATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56640818 504 + 60714840 ----------gtttattgagacagagtctccctctgtcttccaggctacagtgtagtgtcacgatctgggctcactgcaacctgcacctcctggattcaagtgattctcctgcctcagtctctcgagtagctgggattacaggcaactgccaccacacccggctaattcttattgtatattttttgtagagaggatgtttcaccatgttgcccaagcttgtctgaaactcccaacctcaagtgatccaaccatctcagcaacccaaagtactgggattacaggcgtgagccactgtgcccagccAGAATTCAAAATCAATAATAGATAATGCTGAGTGTATAATTTTGGGTGACAGAGAAGTTCTCACTAATCAGATATTTGTGACATTAATGAAAAAGACGAATTGAACCCCTGAAAGATTGGCGGAAGGATTTTCCACACACAGCTGTCAGCCGTGACGGCACAAACGTGAAAACAATCTGATGTTGAAGGAAGAGGTTCTGCATTCAAATG i ponAbe2.chr19 T 53820 C 0 s chlSab2.chr6 47475992 499 + 50890351 atttatttatttTAAttaagacagagtcttactctatcccctacactggagtgcagtgtcacgatcttggttcactgcaacctccgcctcctgggttcaagtgattctcctgcctcagcctcttgagtagcttggattacaggcacccgccaccacacctggctaattctttttgtagatttttggtagagatgatgtttcaccatgttgcccagtct-atctccaactcccagtctaaagtaatccgaccgcctcagcctcccaaagtgctgggattataggcatgagccacggcacccagtcAGAATTTAAAATAAATAATAGATAATGTTGAGTGTATGATTTCAGGTGACAGAGAAGTTCTCACTAATCACATATTTGTGATGTTATTGAAAAAAA-------------TGGAAGACTGGCGGAAAGATTTTCCAAACACAGCTATCAGCCGTGAAGGCACGAAGGTGAAAACAATCTTATGTGGAAGGAAGAGGCTCTGC-CTGAAATG i chlSab2.chr6 C 0 T 12815 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47771990 0 + 51301725 C e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529319 4 + 64156825 I a score=122803.000000 s hg38.chr19_GL949747v2_alt 506159 253 + 729520 CTGGGAATGACGTGGGGAGAATGACAAGACGACTGTAGAGAGACGGAGAGCACACTGGGTACACAGGAAACTAAGGAGCAACAAGGAGTGTGTGTTTGACACTCACAGCCATTGGACTCACCTCGGGGTAACCAGGAATCCCTACATGATTAATA-TGACTGACATGAAAATAAGGGAGGCCCAGGTGCGTAACTGGAATCTAGGAGACCGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGA s panTro4.chr19 59777292 254 + 63644993 CTGGGAATGAGATGGGGAGAATGACAAGACGACTGTGGAGAGATGGAGAGCACACTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTTATACTCACAGCCCTTGGATTCACCTCAGGGTAACCAGGAATCCCTACGTGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCATAACTGGAATCTAGGAGATCGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56641322 254 + 60714840 CTGGGAATGAGTTGGGGAGAATGATGAGACGACTGTAGAGAGATGGAGAGCACACTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTGATACTCACAGCCATTGGATTCAACTCAGGGTAACTAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGAGAGGCCCAGGTGCGTAACTGGAATCTAGGAGAGTGTGGAAAAGGCAATTCCTGCCCCACTGGTGAAATGTGGTGCTGA i ponAbe2.chr19 C 0 I 53092 s chlSab2.chr6 47463676 252 + 50890351 CTGGGAATGAGATGGGGAGAATTACAAGACCACTGGAGAGAGA-GAAGAGCACACTGGGCACACAGGAAACTAAGGAGG-ACAAGGAGTGTGTGTTTTATACTCACAGCCCTTGGATTCACCTCGGGCTAACTAGGAATCCCTACGTGATTTATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCCACCTCACTGGTGAAATATGTTGCGTA i chlSab2.chr6 T 12815 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47771990 0 + 51301725 C e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529319 4 + 64156825 I a score=150338.000000 s hg38.chr19_GL949747v2_alt 506412 338 + 729520 TTTAGACACTAAATGAATGAAGTAGATGGATATAAGATATGTTTGTGAGGTAGAATCATTGGCTGGAAAGGCTTGCTGGGTTTGATTTTTTCCTGGTAGTTTAATCCTCGCTTCACTAACTTATTTCTGAGATTTATTTCTCCTGCATCTAAATCAATACCTGGCAGAGGAGGGAGAGCTAGATGAGGGGTGGTGCAAATGAAGGGACCTAGTATAGCATAATATACAAGGCTGTGAAcggtggctcacgcctgtaacccagcacttcaggaggccaacgcgggtggatcacatgaagtcaggagttcgagaccagcctggccaacatggagaaaccc s panTro4.chr19 59777546 337 + 63644993 TTTAGACCCTAAGTGGATGAAGTAGATGGATATAAGATATGCTTGTGAGGTAGAATCATTGGCTGGAAAGGCTCGCTGGGTTTGATTTCT-CCTGGTAGTTTAATCCTCGCTTCACCAACTTATTTCTGAGATTTATTTCTCCTGCATCTAAATCAATACCTGGCAGAGGAGGGAGAGCTAGATGAGGGGTGGTGCAAACGAAGGGACCTAGTATAGCATAATATACAAggctgtgaacggtggctcacgcctgtaacccagcacttcaggaggccaacgcgggtggatcacatgaagtcaggagttcgagaccagcctggccaacatggagaaaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56694668 337 + 60714840 TTTAGACACTAAGTGGGTGAAGTAGATGGATATAACACATGTTTGTGAGGTAGAATCATTGGCTGGAAAGGCTTGCTGGGTTGGATTTTT-CCTCGTAGTTTAATCCTTGCTTCATTAACTTATTTCTGAGATTTATTTCTCCTGCACCTAAATCAATACCTGGCAGAGGAGTGAGAGATAGATGAGGGGTGGTGCAAATGAAGGGACCTATTATAGCATAATATACAAGGCTGTGAAcggtggctcacgcctgtaacccagcactgcaggaggccaacgcaggtggatcacatgaagtcaggagttcgagactagcctggccaacatggagaaactc i ponAbe2.chr19 I 53092 C 0 s chlSab2.chr6 47463928 337 + 50890351 TTTAAACACTAAATGAATGAAGTGGATGGATACAAGATGTGTATGTGAGGTAGAATAATTCACAGGGAGGGCTTGCCTGGTTTGATTTTT-CCTAATTGTTCAATCTTCACTTCATTAATTTCTTTCTGAGATTTATTTTTCCTACATGTAAATCAATACCTGGCAGAGGACTGATTGATACATGAGGCGTGGTGCAAAGGAAGAGACTTATTATAATATAACACGCAAGGTTGTGAAcggtggctcacacctgtaacccaacattttgggaggctgaggcggatggatccattgaggtcaggagttcaagaatagcctggacactatgctcaaaccc i chlSab2.chr6 C 0 I 33 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47771990 0 + 51301725 C e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529319 4 + 64156825 I a score=8743.000000 s hg38.chr19_GL949747v2_alt 506750 37 + 729520 tatctctactaaaaatacaaaaattaaacaggcatga s panTro4.chr19 59777883 37 + 63644993 tatctctactaaaaatacaaaaattaagcaggcatga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56695005 37 + 60714840 tatctgtactaataatacaaaaattaagcaggcgtgg i ponAbe2.chr19 C 0 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e chlSab2.chr6 47464265 33 + 50890351 I e papAnu2.chr19 47771990 0 + 51301725 C e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529319 4 + 64156825 I a score=177482.000000 s hg38.chr19_GL949747v2_alt 506787 390 + 729520 tggtggtgcatgactgtaatcccag---ctactctggaggaggaagcaggagaatgacttcagccctggaggcagaggttgcagtgagtggagatcgcgtcactgcacaccagcctgggctacacagggatactctggctcaaaaaa-taaaaataaaaaaTACATAAATATAATA--ATATACACAAATGATGCAGGCACCTGAATTCCAATCATCATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGAAAATCAGCCTAAAACCTCTTCCATATTTGGCTTTCTGTGAACATGAGATCATATGGAAAATATGAAAGCCCCCTGAACCCACCAGCACAGGCCCTGAAATAGGGAAAGTGCTCTGTTCATCACAAG s panTro4.chr19 59777920 393 + 63644993 tggtggtgcatgactataatcccag---ctactctggaggatgaagcaggagaatgacttcagccctggaggcagaggttgcagtgagtggagatcgcgtcactgcacaccagcctgggtgacacagggatactctgtctcaaaaaaataaaaataaaaaaTACATAAATATAATATAACATACACAAATGATGCAGGCACCTGAATTCCAATCATCATTTTTCTATTTCTCTATAATTACTTCTTTGGTCCTTTATCTTATCCATTAGAAAATCAGCCTAAAACCTCTTCCGTATTTGGCTTTCTGTGAACATGAGATCATATGGAAAATATGAAAGCCCCCTGAACCCACCAGCACAGGCCCTGAAATAGGGAAAGTGCTCTGTTCATCACAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56695042 390 + 60714840 tggtggtgcatgactgtaatcccagctcctactctggaggaggaagcaggagaatgacttcagccctggaggcagaggttgcagtgagtcgagatcacgtcactgcacgccagcctgggcgacacagggacactccatctcaaaaaa-taaaaataaaaaaTACATAAATATA-----ACATACACAAATGATGCAGGCACCTGAATTCCAATCATCATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGAAAATCAGCCTAAAACCTCTTCCGTATTTGGCTTTCTGTGAACATGGGATCATATGGAAAATATGAAAGCCCCCTGAACCCACCAGCACAGGCCCTGAAATAGGGAAAGTGCACTGTTCATCACAAA i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47464298 390 + 50890351 tggtggcgcatgcctgtaataccag---ctattcgggaggctgaagcaggagaatggcttccacccgcgaggcagaggtttcagtgagccgagatcgc-tcattggactacaccctgggtgacagagtgagactctatctcaaaaaa-taaaaatacaaaaCACATAAATCTAATATAGCATACAGGAATGACAAAGGCACTTCAATCCCAATTATCATTTTTCTGTTTCTCTATAACGACTTCTTTGATCCTTTATCTTATTCATTAGAAAATCAGCCAAAAACGTCTTCCCTATTT-GCTTTCTGTGAGCCTGAGATCATATGGGAAATATGAAAGGCCCCTGAACCCACCAGCACAGGCCCTGGAATAGAGAAAGTTCTCTGTTCATGGCATA i chlSab2.chr6 I 33 T 34712 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47771990 0 + 51301725 C e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529319 4 + 64156825 I a score=165786.000000 s hg38.chr19_GL949747v2_alt 507177 361 + 729520 AAACTTGCCCCCTCACCCAAATCCCCCACCTCACCCCTACTTCCAATCACCTGTGGAGATACAGATAGATCATGGGGAGGTAAACGCTAATACTCCTTGGAGTGAGTTCAGATCTTGGAATCAGAGATCAGCACCAGCACTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTTTTGAAGCAATAGATGGTGGAGGGGGTGGTCTTTCCCCCAGCCTCTCAGGTGGAACAGCAGCCTAACATGTGTCTCGCGAGATCACAAAGAGTAGCACGTTTCACATGGGCTTCATCATTATTTCCTGGCTGTTTGACATAAGAGAATTCTACTTTGCTTTTTTGATCTTGATTT s panTro4.chr19 59778313 361 + 63644993 AAACTTTCCCCCTCACCCAAATCCCCCACCTCACCCCTACTTCCAATCACCTGTGGAGATACAGATAGACCATGGGGAGGTAAACGCTAATACTCCTTGGAGTGAGTTCAGATCTTGGAATCAGAGATCAGCACCAGCACTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTTTTGAAGCAATAGATGGTGGAGGGGGTGGTCCTTCCCCCAGCCTCTCAGGTGGAACAGCAGCCTAACATGTGTCTCGTGAGATCACAAAGAGTAGCACGTTTCACATGGGCTTCATCATTATTTCCTGGCTGTTCGACATAAGAGAATTCTACTTTGCTTTTCTGATCTTGATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56695432 361 + 60714840 AAATTTGCCCCCTCACCCAAATCCCCTACCTCAGCCCTACTTCCAATCACCTGTGGAGATACAGATAGACCATGGGGAGGTAAACGCTAATACTCCTTGGAGTGAGCTCAGATCTTGGAATCAGAGATCAGCGCCAGCACTAGCTCCTGCTCCCCTTTCGTACTAATTCACAGGAGGACAGGTGGTATTGAAGCAGTAGATGGTGGAGGGGGCGGTCCTTCCCCCAGCCTCTCGGGTGGAACAGCAGCCTAACATGTGTCTCCTGAGATCACGAAGAGTAGCACGTTTCACACGGGTTTCACCATCATTTCCTGGATGTTTGACATAAAAGAATTCTACTTCTCTTTTTTGATCTTGATTT i ponAbe2.chr19 C 0 T 53089 s chlSab2.chr6 47429976 356 + 50890351 AAACTTGCCCCCTCACCCAAATCCCCCACCTCACCTCTACTTCCTATCATATTAAGAGACACAGATAGACCATGGGAAGGTAAAAACTAATATTCTTTGGAGT----TCAGACCTTGGACTCAGAGACCAGTGCCAGCACCATCTCCTGGTCACCTTTTATACGAATTCACAGAAGGACAGGTTGTACCGAAGCAATAGATGATGGAGGGGGTTGTCCTTCCTCTGGACTCTCAGGTAGAACGGCAGCCTAATAT-TGACTCCCGAGATCACAAAAAGGAGCACGTTCTTCACGAGCTTCATCATTATTTCCTGGCTGTTTGATATATGACAGTTCTACTTCACTGTTTTGATCTTGATTT i chlSab2.chr6 T 34712 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47771990 0 + 51301725 C e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529319 4 + 64156825 I a score=251206.000000 s hg38.chr19_GL949747v2_alt 507538 535 + 729520 CACTTTTGTGTCCTTTTCTTGGAGAATGTAATTTG----AGTCAAGAGGGTTGTGGATGTAGAAACTGTAAAGCACATTCACTGTGTATCAATCCCAGTTCAGTCTTTCCAGAGAAGACTCTaaacacctgctgtactgcacctgggcctatgcaaatttctatcactcaccgtcactccagggagacagaacacacagagaatacgttacataggcaggttcattactaacagataagcagcgagtgacaacagaagcctacatttcaatgtgagccagtccctcaaggctcagaaaagcttctcgggacatatggagtcacctcatttgcagtgtatctgggggaagccagaaaatagcccagcctgggtttcgtaccctgaagccacaggaagcactcagctaaagcactgcatgacgtcctcctccaggaagaacaggaagacagcacaggctgttctgagacgttcctcctgatctcaggacgttgctgtcttagtccatttttgttgctataaaagaacacttgagcctgggt s panTro4.chr19 59778674 535 + 63644993 CATTTTTGTGTCCTTTTCTTGGAGAAGGTAATTTG----AGTCAAGAGGGTTGTGGATGTAGAAACTGTAAAGCACATTCACTGTGTATCAGTCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGGactgcacctgggcctatgccaattcctatcactcaccgtcacttcagggagacagaacacacagagaatacgttacataggcaggttcattactaacagataagcagcgagtgacaactgaagcctacatttcaatgtgagccagtccctcaaggctcagaaaagctgctcgggacatatggagtcacctcatttgcagtgtagctgggggaagccagaaaatagcccagcctgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacatcctcctccaggaagaacaggaagacagcccagcctgttctgagacgttcctcctgatctcaggacgttgctgtcttagtccatttttgttgctctaaaggaacacttgagcctgggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56642704 539 + 60714840 CACGTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTCACTCAAGAATACTGTGGATGTAGAAATCCTAAAGCACATTCGCTATATATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGTACTGCGCCTGGGCCTATGCCAATTCCTATCACTCACCGTCACTCAAGGgagacagaacacacagagaatacattacataggcaggttcattactaacagataagcagtgagtgacaagagaagcctacatttcaatgtgagccagtccctgaaggctcagaaaagctgctccggagatatggagtcatcccatttgcagggtagctgggggaagccagaaagcagcccagcctgggtgttctaccctggagccacaggaagcactcagctaaagcactgcatgacatcctcctctaggaaaaacaggaagacagcccaggctcttctgggacattcctcctgatctcaggatgttgctgtcttagtccatttttgttgctataaaggaacacttgagcctgggt i ponAbe2.chr19 T 53089 C 0 s chlSab2.chr6 47430332 536 + 50890351 CACGTT--ATTCCTTTTCTTGCCGAATGTAATGCGTTTGAGTCAAGTGGGTTGTGGCCGTAGAAATTGAAAAGCACATTCACTGTGTATCGATCCCAGTCCAGTCTTCCCAGAGAAGACTCTaaacacctcctgtactgcacctggggctatgccagtttctatccctcaccgtcactccagggagacagaacacacagagaatacattacatagacaggttcactactaacagataaccagcaagtgactacagaagcctacatttcagtgtgagccagtgccccaaggctcagaaaagctgcccgagacatacggagtcaccgcatttgcactgcagctgagggaacccagaaagcaacccagcctgggttttgtaccctggagctacaggaagcactgagctaaagcactgcatggtgtcctcctctgggaagaacaggaagacagcccag-ctgttctgggactttcctcctgatctcaggatgttgctgtcttagtccatttttgaggttgtaaaagaacacttgagcctgggt i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47771990 0 + 51301725 C e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529319 4 + 64156825 I a score=217566.000000 s hg38.chr19_GL949747v2_alt 508073 2408 + 729520 tacttCttttttttttttttttttt--GTATAGTGCTTCTGATGAGCTTTTTTTTTAAAtttttattattattatactttaagttttagggtacatgtgcacaatgtgcaggttagttacatatgtatacatgtgccatgctggtgtgctgcacccatcaactcgtcatttagcattaggtatatctcctaatgctatccctcccccctccccccacccaacaacagtccccagagtgtgatgttccccttcctgtgtccatgtgttctcattgttcaattcccacctataagtgagaacatgcagtgtttggatttttgtccttgtgatagtctactgagaatgatgatttccaatttcatccatgtccctgcaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttcatccagtctatcattgttggacatttgggttggttccaagtctttgctattgtgaatagtgccacaataaacatacgtgtccatgtgtctttatagcagcatgatttatagtcctttgggtttatacccagtaatgggatggctgggtcaaatggtatttcaagctctagatccctgaggaatcgccacactgacttccacaatggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcccgactttttaatgatcgccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagtcatggtgagcattttttcatgtgttttttggctgcataaatgtcttcttttgagaagtgtctgttcatgtcctttgcccactttttgataggattgtttgtttttttcttgtaaatttgtttgagttcattgtagattctggatattagccctttgtcagatgagtaggttgcgaaaattttctcccattttgtaggttgtctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttaattagatcccgtttgtcaattttggcttttgttgccgttgcttttggtgttttagacatgaagtccttgtccatgcctatgtcctgaatggtaatgcctaggttttcttctagggtttttatggttttaggtctaacgtttaagtctttaatccatctcaaattaatttttgtataaggtgtaaggaagggatccagtttcagctttctacctatggctagccagttttcccagcaccatttattaaatagggaatcctttccccattgcttgtttttctcaggtgtgtcaaagatcacatagttgtagatatgtggcattatttctgagggctctattctgttccattgatctatatctctgttttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggcagcatgatgcctccagctttgttcttttggcttaggattgacttggcaatgcaggctcttttttgattccatatgaactttaaggtagttttttccaattctgtgaagaaagtcattggtagcttgatggggatggcattgaatctataaattaccttgggcagtatggccattttcacgatcttgattcttcctacccatgagcatggaatgttcttccatttgtttgtatcctcttttatttcattgagcagtggtttgtagttctccttgaagaggtccttcatatcccttgtaagttggattcctaggtattttattctctttgaagcaattgtgaatgggagttcactcatgatttggctctctgtttgtctgttattggtgtataagaatgcttgtgatttttgtacattgattctgtatcctgagactttgtagaagctgcttatcagcttaaggagattttgggctgagacaatggggttttctagatatacaatcatgtcatctgcaaacagggacaatttgacttcctcttttcctaattcaataccctttatttccttctcctgcctaattgccctggccagaacttccaacactatgttgaataggagtggtgaaagagggcatccctgtcttgtgccagttttcaaagggaatgcttccagtttttgcccattcagtatgatactggctgtgggtttgttatagatggctcttattattttgagatacgtcccatcaatgcctaatttattgagagtttttagcatgaagtgttgttgaattttgtcaaaggccttttctgcatctattgagataatcgtccggtttttgtctttggttctgtttatatgatggattacatttattgatttgcatatattgaaccagccttgcatcccagagcctgggc s panTro4.chr19 59779209 2407 + 63644993 aacttCtttttttttttttttttttttGTGTAGTGCTTCTGATGAGCTTTTTTTTTAAAtttt-attattattatactttaagttttagggtacatgtgcacaatgtgcaggttagttacatatgtatacatgtgccatgctggtgtgctgcacccatcaacttgtcatttagcattaggtatatctcctaatgctatccctcccccctccccc-accccacaacagtccccagagtgtgatgttccccttcctgtgtccatgtgttctcattgttcaattcccacctatgagtgagaacatgcagtgtttggatttttgtccttgtgatagtttactgagaatgatgatttccaatttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttcatccagtctatcattgttggacatttgggttggttccaagtctttgctattgtgaatagtgccgcaataaacatacgtgtgcatgtgtctttatggcagcatgatttatagtcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttcaagctctagatccctgaggaattgccacactgacttccacaatggttgaactagtttacagtcccatcaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgattgccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagtcatggtgagcattttttcatgtgttttttggctgcataaatgtcttcttttgagaagtgtctgttcatgtccttcgcccactttttgatagggttgtttgcttttttcttgtaaattcgtttgggttcattgtagattctggatattagccctttgtcagatgagtaggttgcgaaaattttctctcattttgtaggttgtctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttaattagatcccatttgtcaattttggcttttgttgccattgcttttggtgttttagacatgaagtccttgtccatgcctatgtcctgaatggtaatgcctaggttttcttctagggtttttatggttttaggtctaacgtttaagtctttaatccatctcgaattaatttttgtataaggtgtaaggaagggatccagtttcagctttctacctatggctagccagttttcccagcaccatttattaaatagggaatcctttccccattgcttgtttttctcaggtttgtcaaagatcagatagttgtagatatgtggcattatttctgagggctctattctgttccatttatctatatctgtgttttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggcagcatgatgcctccagctttgttcttttggcttaggattgacttggcgatgctggctcttttttggttccatatgaactttaaggtagttttttccaattctgtgaagaaagtcattggtagcttgatggggatggcattgaatctataaattaccttgggcagtatggccattttcacgatattgattcttcctacccatgagcatggaatgttcttccatttctttgtatcctcttttatttcattgagcagtggtttgtagttctccttgaagaggtccttcacgtcccttgtaaattggattcctaggtattttattctttttgaagcaattgtgaatgggagttcactcatgatttggctctctgtttgtctgttattggtatataagaatgcttgtgattgttgtacattgattttgtatcctgagactttgtagaagttgcttatcagcttaaggagattttgggctgagacaatggggttttctagatatacaatcatgtcatctgcaaacagggacaatttgacttcctcttttcctaattgaataccctttatttccttctcctgcctaattgccctggtcagaacttccaacactatgttgaataggagtggtgagagagggcatccctgtcttgtgccagttttcaaagggaatgtttccagtttttgcccattcagtatgatactggctgtgggtttgtcatagatggctcttattattttgagatacgtcccaccaatacctaatttattgagagtttttagcatgaag-gttgttgaattttgtcaaaggccttttctgcatctattgagataatcgtgtggtttttgtctttggttctgtttatatgatggattacatttattgatttgcatatattgaaccaggcttgcatcccagagcctgggt i panTro4.chr19 C 0 C 0 e ponAbe2.chr19 56643243 0 + 60714840 C e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e chlSab2.chr6 47430868 0 + 50890351 C e papAnu2.chr19 47771990 0 + 51301725 C e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529319 4 + 64156825 I a score=546.000000 s hg38.chr19_GL949747v2_alt 510481 1 + 729520 a s panTro4.chr19 59781616 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56643243 1 + 60714840 a i ponAbe2.chr19 C 0 I 52761 s chlSab2.chr6 47430868 1 + 50890351 a i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47771990 0 + 51301725 C e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529319 4 + 64156825 I a score=178083.000000 s hg38.chr19_GL949747v2_alt 510482 449 + 729520 acttctagagaaaacagatttgtttgcctcacagttctgcaggctgtactg-gaagcatggcaccagcatctgtttcctgtgacggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgcagagaccacagagatcacatggcaagagagggagcaaggggga-gggcgagcgatggagcttccaagctctttttaacaaccagccctccg-ggaactaatagagggggaacttgctaaccccatcatgtggggcagcattaatctattcatgatggatccacctccatgactcaaacaccttcccataggcccaaacttccacactgggggttaaatttcaatatttcagtgtgaggtttcaaagggtcaaacatctaaactaaagcagctgtatcctcagcatgttctatggtttctatgagagctgtaactgag s panTro4.chr19 59781617 449 + 63644993 acttctagagaaaacagatttgtttgcctcacagttctgcagactgtactg-gaagcatggcaccagcatcggtttcctgtgatggcctcaggctgctcccactctgggagaagggaaggagggtctgtctgtgcagagaccacagagatcacacggcaagagagggagaaaggggga-gggcgagcgatggagcttccaagctctttttaacaaccagctctccg-ggaactaatagagggggaacttgctaaccccatcatgtggggcagcattaatctattcatgatggatccacctccatgactcaaacaccttcccataggcccaaacttccacactgggggttaaatttcaatatttcagtgtgaggtttcaaagggtcaaacatctaaactaaagcagctgtatcctcagcacattctatggtttctatgagagctgtaactgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56696005 439 + 60714840 acttctaaagaaaagagatttgtttccctcacagttctgcaggctgcactgcgaagcatggcaccagcatctatttcctgtgacggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgc--agaccagagagatca-acggcaagagagggagtaagggggaggggggagcgatggagcttccaagctctttttaacaagcagttctccgtggaactaatcgagggggggcttgctaaccccgtcgtgtggggcagcattgatctagtcatgatggatccacctccatgactc-aacatcttcccataggcccaaactcccaccct-ggggttaa--------atttcagtgtggggtttgaaggggtcaaacaactaaactaaagcagttgtatcttcagcatgttctatggtttctataagagctataactgag i ponAbe2.chr19 I 52761 C 0 s chlSab2.chr6 47430869 421 + 50890351 acttctacagaaaagagaattggttgacttacagttctgcaagctgtacaa-gaggcaggacaccagcatctatttctggctgcggcctcaggctgctcctactctggtagaagagaaggggggcctacatgtgcagtgaccaccgagatcacatggcaagacagggagaaagggagt-------gtgatggagcttccaagctctttttaagaaccaactctccagagtactaatagagggagaacgtgctaaccccgtcatgtggggcag------------catgatggatccacccccatcacccaaatacctcctgataagaccaacttcccacactcagggttaa--------atttcaaagtgaagtttctgggggtcaaatatccatacgatagcaggtgt---ctcagcacattccgtggttattatgaaaactataactgag i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e papAnu2.chr19 47771990 0 + 51301725 C e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60529319 4 + 64156825 I a score=1763.000000 s hg38.chr19_GL949747v2_alt 510931 2 + 729520 aa s panTro4.chr19 59782066 2 + 63644993 aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56696444 2 + 60714840 aa i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55651773 2 + 59248254 ag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47771990 2 + 51301725 AG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47431290 2 + 50890351 aa i chlSab2.chr6 C 0 I 58843 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60529319 4 + 64156825 I a score=1664394.000000 s hg38.chr19_GL949747v2_alt 510933 981 + 729520 agcaggagaaagctgggtcTCCCGCCATCAGGCTGCTTGTCCTAAGGAGATGTTCCATGTGGTTACCTGTCAATCAAGAAAT--GAGACAATCCATAAAGAGGAACTGCTATGATTAGCTTCTTATTGGATTCCCATCTTCCTCCAGGTATCTGCAGACACCTGCATGTTCTGATTGGGACCTCAGTGGtcatcttcctcttcatcctcctcctcttctttctcctTTATCGCTGGTGCTCCAACAAAAAGAGTAAGTCTCACGAAGCAGAGGCCAGAGAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCACGCGGGTGTGTGTTCCTCACTGGCAGGATGGTCCCTGGCCCAAGGGAGGAGCCACAGAGGCAGGGCTTTCTAGAGAGAGCACCAGACAACCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGGTTCTGAACTGTATCCTCACATCCCCTGCAGCCACTGACATCC---AGAAGCTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGCCAATTGAGAGCACTTCATGGGATGGGGTCTTGAACTCAGAGAGATAGAATGTCTGAGTCTGGATGTTGGCAGCTGAAGAGCCTCAGGCACCTACAGCCTCCCCCTGTGGGTTGGTGTCTGCCCATGAAATGAGGACCCAGAAGGGCCCTCCAAGCGGTTTTGATGACTTCCGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCGGGGGACAGAACAGTGAATAGGCAGGTAGGTCCTCCTCGGCCCAGCCTCACGGATACAGTCTTA-TCCCTAATAGTCCTGAAAAATGTGAGCACCCTCCCTCACTCAGCATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAGGAGGTGATGTACGCACAGTTGGATCACTGCGTTTTCATACAGAGAAAAATCAGTCGCCCTTCTCAGAGGCCCAAGACACCCCTAACAGATACCAG s panTro4.chr19 59782068 981 + 63644993 agcaggagaaagctgggtcTCCTGCCATCACGCTGCTTGTCCTAAGGAGATGTTCCATGTGGTTACCTGTCAATCAAGAAAT--GAGACAATCCATAAAGAAGAACTGCTATGATTAGCTTCTTATTGGATACCCATCTTCCTCCAGGTATCCGCAGACACCTGCACATTCTGATTGGGACCTCAGTGGTCATCATCCTCTTCATCATCATCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAGAGTAAGTCTCACGAAGCAGAGGCCAGAGAGCTCAGTGCCGTGTGGGGAAGCAGGATGGGAGCAGGCACGTGTGTGTTCCTCACTGGCAAGATGGTCCCTGGCCCAAGGCAGGAGCCACAGAGGCAGGGATTTCTAGAGAGAGCACCAGACAACCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGGTTCTGAACTGTATCCTCACATCCCCTGCAGCCACTGACATCC---AGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGCCAATTGAGAGCACTTCATGGGATGGGGTCTTGAACTCAGAGAGATAGAATGTCTGAGTCTGGATGTTGGCAGCTGAAGAGCCTCAGGCACCTACAGCCTCCCCCTGTGGGTTGGTGTCTGCCCATGAAATGAGGACCCAGAAGGGCCCTCCGAGTGGTTTTGAAGACTTCCGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCGGGGGACAGAACAGTGAATAGGCAGGTAGGTCCTCCTCAGCCCAGCCTCACGGATACAGTCTTA-TCCCTAATAGTCCTGAAAAATGTGAGCACCCTCCCTCACTCAGCATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTTTCATACAGAGAAAAATTGGTCGCCCTTCTCAGAGGCCCAAGACACCCCTAACAGATACCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56696446 986 + 60714840 agcaggagaaagctaggtctcccgccatctgggtgcttgtcctAAGGAGACGTTCCACGTGGTTACCTGTCAATCAAGAAATGAGAGATAATCCATAAAGAGGAACTGCTATGATGAGCTTCTTATTGGATTCCCATCTTCCTCCAGGTATCCGCAGACACCTGCATGTTCTGACTGGGACCTCAGTGGTCATCATCCTCTTCATCCTCCTCCTCTTCTTTCTTCTTTATCGCTGGTGCTCCAACAAAAAGAGTAAGTCTCACAGAGCAGAGGCCAGAGAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCACGCAGGTGTGTGTTCCTCACCAGCAGGATGGTCCCTGGCCCAAGGCAGGAGCCTCAGAAGCAGGACTTTCTAGAGAGAGCAGCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGGTTCTGAACTGTATCGTCACATCCCCTGCAGCCACTCACTTCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCACCGGGATGGGAACACAGAGCTATTCATGGGAT-GGTCCTTGAGCTCAGAGAGAGAGAATGTCTGAGTCTGGATGTTGGCAGCTGAGGAGCCTCAGGCACCTACGGCCTCCCCCTGTGTGTTGGTGTCTGATCATGAAATGAGGACCCAGAAGTGCCCTCCCAGGTGTTTTGTTGACTTCCGTCTCCTACAGATGCTGCTGTAACGGACCAAGAGCCTGCGGGGGACAGAACAGTGAACACGGAGGTAGGTCCTCCTCGGCCCAGCCTCGTGGATCAAGTCTTATTCCCTAATAGTCCTGAAAAATGTGAGCACCCTCCCTCACTCAGCATTTCCCTCTCTCCAGGACTCTGATGAACAAGAGCCTCAGGAGGTGAGATACGCACAGTTGGATCACTGCGTTTTCACACAGAGAAAAATCACTCGCCCTTCTCAGAGACCCAAGACACCCCCAACAGACACCAT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60529323 982 + 64156825 agcaggagaaAGCTGGGTCTCCCGACATCAGGCCGCTTGTCCTAAGGAGACATTCCACATCGTTACCTGTCAATCAAGAAACGAGAGACAATCCATAACAAGGAACTGCTATGATTAGCTTCTTATTGGAGTCTTTTCTTCCTCCAGGTAACCCTAGACACCTGCATGTTCTGATTGGGACCTCAGTGGTCATGATCCTCTTCA---CCATCTTCTTCTTTCTCCTGCATCGCTGGTGCTCCAACAAAAAGAGTAAGTCTCACGAAGCAGAGGCCAGAGACCTCAGGGTCGTGTGGGGAAGCGGGATGGGAGCACGCGGGTGTGTGTTCCTCACCGGCAGGATGGTCTCTGGCCCAAGGCAGAAGCCACAGAGGCAGAGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCGTGACAGGCAGAAAGTGGGAGGCAGAATCAATGGGATGGAAATTGAGAGCCATTCATGGGAAGGGGTCTTGAACTCAGAGAAACAGAATGTCTGAGCCTCGCTGTTGGCAGCTGAGGCACCTCAGGCATCTACGGCCTCCCCCTGTGTGTTGTAATCTGCACATGAAATGAGGACCCAGATGGGCCCTCCCAGCTGTTTTGATGACTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGGCCCAGCCTCGTGGATCGAATCTTATTCCCTACTAGTCCTGAAGAATGTGAG-CCCCTCCCTCACTCAACATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACCGCGTTCTCACACAGGGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAG i rheMac3.chr19 I 4 C 0 s macFas5.chr19 55651775 982 + 59248254 agcaggagaaAGCTGGGTCTCCCGCCATCAGGCCGCTTGTCCTAAGGAGACATTCCACATGGTTACCTGTCAATCAAGAAATGAGAGACAATCCATAAGAAGGAAATGCTATGATTAGCTTCTTATTGGAGTCTCTTCTTCCTCCAGGTAACCCCAGACACCTGCATGTTCTGATTGGGACCTCAGTGGCCATGATCCTCTTCA---CCATCTTCTTCTTTCTCCTGCATCGCTGGTGCTCCAACAAAAAGAGTAAGTCTCACGAAGCAGAGGCCACAGACCTCAGGGCCGTGTGGGGAAGCGGGATGGGAGCACGCAGGTGTGTGTTTCTCACCGGCAGGATGGTCTCTGGCCCAAGGCAGGAGCCACAGAGGCAGAGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGATAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGAAATTGAGAGCCATTCATGGGAAGGGGTCTTGAACTCAGAGAAACAGAATGTCTGAGCCTCGCTGTTGGCAGCTGAAGCACCTGAGGTGTCTACGGCCT-CCCCTGTGTGTTGGGCTCTGCACATGAAATGAGGACCCAGAAGTGCCCTCCCAGCTGTTTTGATGCCTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGGTCCAGCCTCATGGATCGAATCTTATTCCCTACTAGTCCTGAAGAATGTGAGCCCCCTCCCTCACTCAACATTTCCCTCTCTCCAGGACCCTGATGAACAAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTCTCACACAGGGAAAAATCACTTGCCCTTCTCAGAGGCCCAGGAGACCCCCAACAGATACCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47771992 982 + 51301725 AGCAGGAGAAAGCTGGGTCTCCCGCCATCAGGCCGTTTGTCCTAAGGAGACATTCCACAAGGTTACCTGTCAATCAAGAAACGAGAGACAATCCATAACAAGGAACTGCTATGATTAGCTTCTTATTGGAGTCTCTTGTTCCTCCAGGTAACCCCAGACACCTGCACGTTCTGATTGGGACCTCAGTGGTCATGATCCTCTTCA---ccatcttcttctttctcctgcatCGCTGGTGTTCCAACAAGAAGAGTAAGTCTCACGAAGCAGAGGCCACAGACCTCAGGGCCGTGTAGGGAAGCGGGATGGGAGCACGCAGGTGTGTGTTCCTCACCGGCAGGATGGTCTCTGGCCCAAGACaggagccacagaggcagagctttcTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCCCAGACCATTGCCTGATTCTGAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGAAATTGAGAGCCGTTCATGGGGAAGGGTCTTGAACTCAGAGAGACAGAATGCCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCTGGCACCTACAGTCTCCCGCTGCGTGTTGGGCTCTGCACATGAAATGAGGACCCAGACGTGCCCTCTCAGCTGTTTTGATGACTTTTGTCTCCTACAGATGCTGCTGTAATGGACCCAGAGCCTGCGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGGCCCAGCCTCGTGGATACTGCTTTATTCCCTAATAGTCCTGAAGAATGTGAG-CCCCTCCCTCACTCAACATTTCCCTCTCTCCAGGACTCTGACGAACCAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGGGTTCTCACACAGGGAAAAACCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47490135 981 + 50890351 AGCAGGAGGAAGCTGGGTCTCCCGCCATCAGGCCGCTTGTCCTAAGGAGACATTCCACATGGTTACCTGTCAATCAAGAAACGAGAGACAATCCATAAAAAGGAACTGCTATGATTAGCTTCTTATTGGAGTCTCTTCTTCCTCCAGGTAACCCCAGACACCTGCCTGTTCTGATTGGGACCTCAGTGGTCATGATCCTCTTCA---CCATCTTCTTCTTTCTCCTGCATCGCTGGTGCTCCAACAAAAAGAGTAAGTGTCATGAAGCAAAGGCCACAGATCTCAGGGCCGTGTGGGGAAGCGGGATGGGAGCACGCAGGTGTGTGTTCCTCACCAGCAGGATGGTCTCTGGCCCAAGGCAGGAGCCACAGAGGCAGGGATTTCGAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTATCCTCACAT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGAAATTGAGAGCTATTCATGGGAAGGGGTCTTGAACT-AGAGAGACAGAATGTCTGAGCCTGGCTGTTGGCAGCTGAGGGACCTCGGGCACCTACGGCCTCCCCCTGTGTGTTGGGCTCTGCACATGAAATGAGGACCCAGACGTGCCCTCCCAGCTGCTTTGATGCCTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTACGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTTGGCCCAACCTCATGGATACTGCCTTATTCCCTAATAGTCCTGAGGAATGTGAG-CCCCTCCCTCACTCAACATTTCCCTCTCTCCAGGACTCTGATGAACCAGAGCCTCAGGAGGTGACATACGCACAGTTGGATCACTGTGTTCTCACACAGGGAAAAATCACTCACCCTTCTCAGAGGCCCAAGAGACCCCCAACAGATACCAG i chlSab2.chr6 I 58843 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M a score=2099369.000000 s hg38.chr19_GL949747v2_alt 511914 939 + 729520 CGTGTACACGGAACTTCCAAATGCTGAGCCCAGATCCAAAGTTGTCTCCTGCCCACGAGCACCACAGTCAGGTCTTGAGGGGGTTTTCTAGGGAGACAACAGCCCTGTCTCAAAACCAGGTTGCCAGATCCAATGAACCAGCAGCTGGAATCTGAAGGCATCAGTCTGCATCTTAGGGGATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTTGCTTACAAATGCCTAAGGTCGCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAAGTATCTATTTCacttgacccctgcccacctctccaacctaactggcttacttcctagtcctacttgaggctgcaatcacactgaggaactcacaattccaaacatgcaagaggctccctcttaacacggcacttacacacttgctgttccaccttccctcatgctgttccacctcccctcAGACTATCTTTCAGCCTTCTGTCATCAGTAAAATTTATAAA-TTTTTTT-TATAACTTCAGTGTAGCTCTCTCCTCTTCAAATAAACATGTCTGCCCTCATGGTTTCGATAATGTGACTCTTTATTCGCCAAAAGTTTCCAGTGTTATCATTACTATGTCCATATAACCTGATATGTTCTCTACTGGGTtctcagccctggactctgagcttctggaagcagggtggagcctcatttgtctctgggactccaatttccatccaaagatgcagcacataggaggtTCCAAGGATCGTGAATCACATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCAAGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCtccacagggacacatgtcaacacatcatctttcatactataaatatacagtcgctcctccatatctgtgg s panTro4.chr19 59783049 938 + 63644993 CGTGTACACGGAACTTCCAAATGCTGAGCCCAGATCCAAAGTTGTCTCCTGCCCACGAGCACCACAGTCAGGCCTTGAGGGGGTTTTCTAGGGAGACAACAGCCCGGTCTCAAAACCAGGTTGCCAGATCCAATGTACCAGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGGATCGCTCTTCCTCACACcacgaatctgaacatgcctctctcttgcttacaaatgcctaaggtcgccactgcctgctgcagagaaaacagactcctttgcttagcccacaagtatctatttcacttgacccctgcccacctctccaacctaactggcttacttcctagt-ctacttgaggctgcaatcacactgaggaactcacaattccaaacatgcaagaggctccctcttaacacggcacttagacacgtgctgttccaccttccctcatgccgttccacctcccctcagactatctttcagccttctgtcatcagtaaaatttataaa-ttttttt-tataacttcaatgtagctctctcctcttcaaataaacatgtctgccctcatggttttggtaatgtgactctttattcactgagagtttccagtgttatcattactatgtccatataacctcatctgttctccactggtttctcacccctggactctgagcttctggaagcagggtggagcctcatttgtctctgggactccaATTTCCATCCAAAGATGCAGCACGTAGGAGGTTCCAAGGATCGTGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCAAGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGGACACATGTCAACGCATCATCTTTCATACTATAAATATAcagtcgctcctccatatctgtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56697432 936 + 60714840 CGTGTACACGGAACTTCCAAATGCTGAGCCCAGATCCAAAGTTGTCTCCTGCCCATGAACACCACAGTCAGGCCTTGAGGGGGTCCTCTAGGGAGACAACAGCCCTGTCTCAAAACCGGGTTGCCAGCTCCAATGTACCAACAGCTGGAATCTGAAGGCGTCAGTGTGCATCTTAGGGCATCGCTCCTTCTCACACCACAAACCTG---GTGTCTCTCTCTTGCTTACCAATGTCTATAGTTCCCACTGCCTGCTGGAGAGAAAACACACTCCTTTGCTTAACCCACAATTCTCTATTTCacttgacccctggccacctctccagcctaactggcttacttcctagt-ctacttgaggctgcgatcacactgaggaactcacaattccaaacatacaagaggctccctcttaacatggcacttagacacgtgctgttccaccttccctcatgctgttccacctcccctcAGACTATCTTTCAGCCTTCTGTTGGCAGTAAAACttataaa-tttttttaaataatttCAATGTAGCTCTCTCCTTTTCAAATAAACATGTCTGCCCTCATGGTTTCGGTAATGTGACTCTTCTTTTGCCAAAAGTTTCTGGTGTTATCATTTCTATGTCCATATAACCCCATCTGTTCTCCACTGGGTtctcacccctggactccgagcttctggaagcagggtggagcctgatttgtctctgagactccaatttccttccaaagatgcagcacataggaggtTCCAAGGATCGTGAATCACATGAACAAGTGATATTCTTACTCTCTGCAGACCTGCAAAGCCGGCAGAGTCATTCCACGATGAAACATTTGCAGAGTCACAGGCCTTGTTAGTCTCATCTCCACGGGGACACATATCAACACATCATCTTTCATACTATAAATATACAGTCGCTCCTCCATATCTGTGG i ponAbe2.chr19 C 0 T 52752 s nomLeu3.chr10 103247882 935 - 106955855 CGTGTACACGGAACTTCCAAATGCTGATCCCAGATCCAAAGTTGTCTCCTGCCCACAAGCACCACAGTCAGGCCTTGAGGGGGTTTTCTAGGGAGACAACAGCCCTGTCTCAAACCCAGCTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGGATTGCTCTTCCTCACACCACAAATCTG---GTGTCTCTCTCTTGCTTACAAATGTCTATGGTTCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCTATTTCACTTGacccctgcccacctctccaacctaactggcttacttcctagtcctacttgaggctgcgatcacactgaggaactcacaattccaaacacacaagaggctccctcttaacacggcacttagacacgtgctgttccaccttccctcatgctgttccacctcccctcagactatctttcagtcttctgtcatcagtAAAATTTATAAA-TTTTTTT--ATAATTTCAATGTAGCTCTCTCCTCTTCAAATAAACATGTCTGCCCTCATGGTTTCGGTAATGTGACTCTTTTTTGGCTGAAAGAAACCGGTGTTATCATTACTATGTCCATATAACCCGATATGTTCTCCACTGGGTTCTCAcccctggactctgagcctctggaagcagggtggagcctgatttgtctctgggactccaatttccttccaaagatgcagcacataggaggttccaaGGATCGTGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACCATGAAACATTTGTAGAGTCACAGGCCTTGTTAGTCTCATCTCCACGGGGACACATATCAACACATCATCTTTCATACTAGAAATATAcagtcgctcctccatatctgtgg i nomLeu3.chr10 M 8807 C 0 s rheMac3.chr19 60530305 936 + 64156825 CGTGTACACGGAACTTCCAAATGCTGAGCCCAGATCGAAAGTTGTCTTCTATCCATGAGCACCACCGTCAGGCCTTGAAGGGGTCTTCTAGGGAGACAACAGCCCTGTCTCAAAACCGGCTTCACAGCTCCAATGTACCAGCAGCAGGAATCTGAAGGTGTGAGTCTGCATCTTAGGACATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTCGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCActtcacttgacccctgcccacctctccaacct-actggcttacttcctagtcctactggaggctgtgatcacactgaggaactcacaattccaaacatacaagagactccctgttaacacagcacttagacacgtgctgttccatcttccctcatgctgttccacctgccCCCAGACTATCTTTCAGCCCT-TGGCAGCAGTGAAACTTATAAA-TTTTTTT--ATCATTTCAACGTAGCTCTCTCCTCTTCAAATAAACACCTCTACCCTCATCCTTTAGGTAATGTGACTCTTTATTCGCTGAAAGTTTCTGGTGTTATCATTACTATGTCCATATAGCCCCATATGTTCTCCAATGGTTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAGAGTGGAGCCTGGTTTCTGTCTGGAACTCCAATTTCCATCCAACGATGCAGCGCATAGGAGGTTGCAAGGATCGTGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACAGGGACACATGTCAACACATCATCCTTCATACTATAAATACAcagtcgctcctccgtatctgagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55652757 935 + 59248254 CGTGTACACGGAACTTCCAAATGCTGAGCCCAGATCGAAAGTTGTCTTCTATCCATGAGCACCACCGTCAGGCCTTGAAGGGGTCTGCTAGGGAGACAACAGTCCTGTCTCAAAACCGGCTTCACAGCTCCAATGTGCCAGCAGCAGGAATCTGAAGGTGTGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCActtcacttgacccctgcccacctctccaacct-actggcttacttcctagtcctactggaggctgtgatcacactgaggaactcacaattccaaacatacaagagactccctgttaacacagcacttagacacgtgctgttccatcttccctcatgctgttccacctcccctcAGACTATCTTTCAGCCCT-TGGCAGCAGTGAAACTTATAAA-TTTTTTT--ATCATTTCAATGTAGCTCTCTCCTCTTCAAATAAACACGTCTGCCCTCATCCTTTAGGTAATGTGACTCTTTATTGGCCGAAAGTTTCTGGTGTTATCGTTACTATGTCCGTATAGCCCCGTATGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTTCTGTCTGGAACTCCAATTTCCATCCAACGATGCAGCGCATAGGAGGTTGCAAGGATCGTGAATGAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACAGGGACACATGTCAACACATCATCCTTCATACTATAAATACAcagtcgctcctccgtatctgagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47772974 917 + 51301725 CGTGTACACGGAGCTTCCAAATGCTGAGCCCAGATCGAAAGTTGTCTTCTATCCATGAGCACCACCGTCAGGCCTTGAAGGGGTCTTCTAGGGAGACAacagccctgtctcaaaaccggCTTCACAGCTCCAATGTACCAGCCGCAGGAATCAGAAGGTGTGAGTCTGCATCTTAGGGCATTGCTCTTCCTCAGACCACGAATCCAAACGTGCCTCTCTCTCGCTTACAAATGTCTGTGGTTCCCACTGCCTGCTGCAGGGAAAATACACTCCTTTGCTTAGCCCACAATTCTCCATTTCACTTGacccctgcccacctctccaaTCTAACTGGCTTACTTCCTAGTCCTACTGGAGGCTGTGATCACACTGAGGAACTCACAGTTCCAAACACACAAGAGACTCCCTGTTAACACAGCACTTAGACGCATGCTGTTCCATCTCCCCT--------------------CAGACTATCTTTCAGCCTTCTGTCAACAGTGaaacttataaatttttttt--atcatttcaatgtAGCTCTCTCCTCTTCAAATAAACACCTCTGCCCTCATCCTTTAGGTAATGTGACTCTTTATTCGCCGAAAGTTTCTGGTGTTATCATTACTATGTCCATATAACCCCATATGTTCTCCACTGGGTTCTCACCCCTGCAATCTGAGCTTCTGGAAG-AG-GTGGAGCCTGATTAGTGTCTGGGACTCCAATTTCCATCCAACGATGCAGCACGTAGGCGGTTTCAAGGATCAGGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACACCTGTAGAGTCATAGGCCTTGTTGGTCTCATCTCCACGGGGACACATGTCCACACATCATCTTTCATACCATAAATACACAGTCGCTCCTCCAGACCTGTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47491116 928 + 50890351 CATGTACATAGAACTTCCAAATGCTGAGCCCAGATCGAAAGTTGTCTTCTATCCACGAGCACCACCGTCAGGCCTTGAAGGGGTCTTCTAGGGAGACAACAGCCCTGTCTCAAAACCAGCTTCACAGCTCCAATGTACCAGCAGCAGGAATCTGAAGGTGTGAGTCTGCATCTTAGAGCATCGCTCTTCCTCACACCACGAATCTGAACGTGCCTCTCTCTCGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCacttgaccccagcccacctctccaaccttactggcttacttcgtagtcctactggaggctgcagtcacactgaggagctcacaattccaaacatacaagaggctcccttttaacacggcacttagactcatgctgttccaccttccctcatgctgttccacctccccccagactatctttcagccttcTGTCAACAGTGAAACTGAAAAA-TTTTTTT--ATCATTTCAATATAGCTCTCTCCTCTTCAAATAAACACGTCTGCCCTCATCCTTTAGGTAATGTGACTCTTTATTCGCCGAAAGTTTCTGGTGTTATCGTTACTATGTCCGTA--------TATGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTTCTGTCTGGAACTCCAATTTCCATCCAACGATGCAGCGCATAGGAGGTTGCAAGGATCGTGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACATCTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGGACACATGTCCACACATCATC-TTCATACTATAAATACAcagtcgctcctccagacctgtgg i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 78353 + 49145316 I a score=530361.000000 s hg38.chr19_GL949747v2_alt 512853 237 + 729520 ggtttacaggtgtttattgaaccaaatataaatcaaaaatattcagagaaaaaatccacaaagttccaaaaagcaaaaatactatattgtgtggacacaagtgaggtggtgtgtaggctgtatcaggaattataagtaatctagagatgatttcatgtatacaggaggatgtgcatgggttatatgcaaacgctgtgccatttcatgcaacaggcttgagcatctgcagattttggt s panTro4.chr19 59783987 234 + 63644993 ggtttacaggtgtttattgaaccaaatataaatcaaaaatattcagagaaaaaatccacaaagttccaaaaagcaaa---actatatggtatggacacaagtgaggtggtgtgtaggctgtatcaggaattataagtaatctagagatgatttcatgtatacaggaggatgtgcatgggttataggcaaacgctgtgccatttcatgcaagaggcttgaacacctgcagattttggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56645616 234 + 60714840 ggtttacaagtgtttattgaaccaactataaatcaaaaatattcagagaatatatccacaaaatttcaaaaagcaaa---actatgttgagtggacacaaatgaagcggtgtgtaggctgtatcaagaattataagtcatctacagatgatgtaatgtatacaggagtatgtgcatgggttatatccaaatgctgtgtcattttatgtaagaggcttgagcatctgcagattttggt i ponAbe2.chr19 T 52752 T 16407 s nomLeu3.chr10 103248817 234 - 106955855 ggtttacaggtgtttattgaaccaagtataaatcaaaaatagtcaaagaaaaaatccacaaagttccaaaaagcaaa---actatattgtatggacacaagtgaggtggtgtgtaggctgtatcaggaattacaagtaatcaagagatgatttcatgtatacaggaggatgtgcatgggttatatgcaaacgctgtgccatttcatgcaagatgcttgaacacctgccgattttggt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60531241 234 + 64156825 ggtttacaggtgtttattgagccaactataaatcaaaaatattcagagaaaaaatccacaaagttccaaaaagcaaa---actatgttgaatggacacaaacggaatggtgtgtaggctgtatccggaattataagtaatctagagatgatttcatgtacacaggaggatgagcatgggttatatgcaaacgctgtaccattttatgtaagaggcttgagcacctgcaggttttggt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55653692 234 + 59248254 ggtttacaggtgtttattgagccaactataaatcaaaaatattcagagaaaaaatccacaaagttccaaaaagcaaa---actatgttgaatggacacaaacggaatggtgtgtaggctgtatccggaattataagtaatctagagatgatttcatgtacacaggaggatgagcatgggttatatgcaaacgctgtaccattttatgtaagaggcttgagcacctgcaggttttggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47773891 234 + 51301725 GGTTTACAGGTGTTTGTTGAGCCAACtataaatcaaaaatattcagagaaaaaatccacaaagttccaaaaagcaaa---actatgttgaatgaatacaaatgAAGCAGTGTGTAGGCTGTATccggtattataagtaatctagagatgatttcatGGACACAGGAGGATGAGCATGGGTCATATGCAAACGCTGTGCCATTTCATGTAAGAGGCTTGAGCACCTgcaggttttggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47492044 234 + 50890351 ggtttacaggtgtttgttgagccaactataaatcaaaaatattcagagaaaaaatccacaaagtttcaaaaagcaaa---actatgttgaatggacacaaatgaagtggtatgtaggctgtgtcaggaattataagtaatctagagatgatttcatggacacaggaggatgagcacaggtcatatgcaaacgctgtgccatttcatgtaagaggcttgagcacctgcaggttttggt i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 78353 + 49145316 I a score=113681.000000 s hg38.chr19_GL949747v2_alt 513090 65 + 729520 gtctg-gtagggaggggggtttcctggaaccaatcacccatgaatagtgaaggactactgtatata s panTro4.chr19 59784221 65 + 63644993 gtctg-gtagggaggggggtttcctggaaccaatcacccatgaatagtgaaggacaactgTATATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56629443 58 + 60714840 atctgagtggaga--------tcctgaaaccaatcactcacgaatagtgaaggatgactgTATATG i ponAbe2.chr19 T 16407 I 68975 s nomLeu3.chr10 103249051 65 - 106955855 gtctg-gtagggagggggttttcatggaaccaatcacccatgaatagtgaaggacaactgTATATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60531475 58 + 64156825 gtcagagcagaga--------tcctgaaaccaatcacccgcgaatagtgaaggatgactgTATATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55653926 58 + 59248254 gtcagagcagaga--------tcctgaaaccaatcacccgcgaatagtgaaggatgactgTATATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47774125 58 + 51301725 gtcagagcAGAGA--------TCCTGAAACCAATCACCCGCGAATAGTGAAGGACgactgtatata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47492278 58 + 50890351 gtctgagcagaga--------tcctgaaaccaatcactcacgaatagtgaaggatgacGGTATATA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 78353 + 49145316 I a score=2689687.000000 s hg38.chr19_GL949747v2_alt 513155 1172 + 729520 attttcattcatcaattTTATAAATAAATCATCAAAATGTATGATAATAAGATAAAA-AATTAGCAGTGTTTTtatggtgtgaaaataagcttagatttattttttcctgcttgtaaccctctggtccaatgttatttactgagaagacattctattccaccttaatccgcatggcagcctctgtcaactataaaaggactgtgtgtacacagatgtattttacacactcttttctgctcagtggctctctgtgtccactctcatgaggatgctgcactttatgtggccttatagaaccccttaaaatttggcagcctgaatcctctaatttctccttcctctttaagattgccattattattattattggctatttgcttttccatgtaaatttgtaatcatttttctcatttccaccaaaaacaatgcttgtaattttgttgtgactcccttacatctacaggt-aagttctgtcctatagaaacataatgcaaaccacatgcattctttcaaacttgctagtatccaaattaaaaagctaacaagaaacagataaaattaatttaagttaacccaatggacccaaaatattattaacccaacaGACCCAAAATATTAACCTAATAGATCCAAAATATTATTTTATTATACAAGTAGACTCAAAATATTATCATTTCAACATGTAATCATGTGTCATCTTGGAAAACATCAGATCCCTGTCTAGGTGGGCAAAGATTTTTCTTCGTAATATCTCATTTCCACATTTCCACTTGGCACAGAAACTGCCCCCAAGGCTCAGGATACTAAGATGCAGTAGGAATGGGTAGATGTATCTGGAGGAAAGTGACTGAATGAAATTGAGACATCAGAGTCTGGGGAACTCACTAGAACTAcagggacagtgtgggggagggaattgggagatgttgatcaaaggatacaaactatcaggtattcaggaggaatgggtctgaagatctcttgtacagctttgccactatggttgacaatactgtactctatacttgaaatttaccaggaaagtagatttttttttttaaatatggaacacttcacgaatttgcgtgtcattcttgcgcaggggccatgctagttttctctgtatcgttccaattttagtatatgtgctgccgaggcaagcatgggagagt s panTro4.chr19 59784286 1168 + 63644993 ATTTTCATTCATCAATTTTAGAAATAAATCATCAAAATGTATG---ATAAGATAAAA-AATAAGCAGTGTTTTTATGGTGTGAAAATAACCTTagatttattttttcctacctttaaccctctggtccagtgttatttattgagaagacattctattccaccttaacccgcatggcagcctctgtcaactataaagggactgtgtgtacacagatgtattttacacactcttttctgctcagtggctctctgtgtccactctcatgaggatgctgcactttatgtagccttatagaaccccttaaaatttggcagcctgaatcctctaatttctccttcctctttaagattgccattattattattattggctatttgcttttccatgtaaattcgtaatcatttttctcatttccaccaaaaacaatgcttgtaattttgttgtgactcccttacatccacagat-aagttctgtcctatagaaacacaatgcaaaccacatgcattctttcaaacttgctagtatccaaattaaaaagctaacaagaaacagacaaaattaatttaagttaacccaatggacccaaaatattattaacccaacaGACCCAAAATATTAACCTAATAGATCCAAaatattattttattatccaagtagactcaaaatattatcatttcaacatgtaatcGTGTGTCATCTTGGAAAATATCAGATCCCTGTCTAGGTGGGCAAAGATTTTTCTTCGTAATATCTCATTTCCACATTTCCACTTGGCACAGAAACTGCCCCCAAGGCTCAGGATAATAAGATGCAGTAGGAATGGGTAGACGTATCTGGAGGAAAATGACTGAATGAAATTGAGACATCAGAGTCTGGGGAACTCACTAGAACTAcagggacagtgtgggggagggaattgggagatgttgatcaaaggatacaaagtttcaggtattcaggaggaatgggtctgaagatctcttgtacagctttgccactatggttgacaatactgtactctatacttgaaatttaccaggagagtaga-tttttttttaaaatacggaacgcttcacgaatttgcgtatcattcttgcgcaggggccatgctagttttctctgtatcgttccaattttagtatatgtgctgccgaggcaagcacgggagagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56698476 1170 + 60714840 atttttatttatcaatttttgaaataaatCATCAAAATGTACAATAATAAGATAAAA-AATAAGCAGTGTTTTtatggtgtgaaaataagcttagatttattttttcctacatgtaaccctctggtccaatgttctttattgagaagatattctattccaccttaacccacacggcagcctctgtcgactataaagggactgtgtgtacacagatgtattttacacactcttttcggctcagtggctctctgtgtccactctcatgaggatgctgcactttatgcagccttatagatccccttataatttggtagcctgaatcctctaatttctccttcctctttaagattgccattattattattattgactatttgcttttccatgtaaatttgtaatcatttttctcatttccaccaaaaataatgcttgtaattttgttgtgactcccttaaatctacagat-aaattctgtgctatagaaacataatgcaaaccacatacattcttttaaatttgctagtat-caaattaaaaagccaacaagaaacagataaaattaatttaagttaacccaatggacccaaaatattattaccccaataGACCCAAAATATTAACCTAATAGATCCAAaatattattttattatcccaatagactcaaaatattatcatttcaacatgtaaccaTGTGTCATCTTGGAAAATATCAGATCCCTGTCTAGGTGGGCAAAGATTTTTCTTCGTAATATCTCATTTCCACATTCCCACTTGGCACAGAAACTGCCCCCAAGGCTCAGGATAATAAGATGCAGTAGGAATGGGTAGATGTATCTGGAGGAAAATGACTAAATGAAATTGAGACATCAGGGTTTGGGGAACTCACTAGAACTAcagggacagtgtgggggagggaattgggagatgttgatcaaaggatacaaagtttcaggtattcaggaggaatgggtctgaagatctcttgtacagcttggccactatagttgacaatactgtactctatacttgaaagttaccaggagagtaga-ttttTTTTTTaaatatggaacacttcacaaatctgcgtgtcattcttgcgcaggggccatgctagtcttctctgtatcattccaattttagtatatgtgctgccgagacgagcaTGGGAGAGT i ponAbe2.chr19 I 68975 C 0 s nomLeu3.chr10 103249116 1159 - 106955855 ATTTTTATTCATCAATTTTAGAAATAAATCATCAAAATA-------ATAAGATAAAA-AATAAGCAGTGTTTTTACGGtgtgaaaataagcttagatttattttttcctatgtgtaaccctctggtccagtgtcatttattgagaagacattctattccaccttaatccacacggcagcctctgtcaactacaaagggactgtgtgtgcacagatgtattttacacactgttttctgctcagtggctgtctgtgtccactctcatgaggatgctgcactttatgtagccttatagaaccccttacaatttggtagcctgaatcctcaaatttctccttcctctttaagattgccattattattattattggctacctgcttttccctgtaaatttgtaatcatttttctcatttccaccaaaaacaatgcttgtaattttgttgtgactccgttaaatctacagat-aagttctgtcctatag-aacataatgcaaaccacatacgttcttttaaatttgctagtatccaaattaaaaagctaacaagaaacagataaaattgatttaagttaacccaatagacccaaaatattattaacccaatagacccAAAATATTAACCTAATAGATCCAAAATATTA-TTTATTATCCAAATAGACTCACAATATTATCATTTCAACATGTAATCATGTTTCATCTTGGAAAATATCAGATCCATGTCTAGGTGGGCAAAGATTTTTCTTCGTAGTATCTCATTTCCACATTTCCACTAGGCACAGAAACTGCCCCCAAGGCTCAGGATGATAAGATGCAGTAGGAATGGGTAGATGTTTCTGGAGGAAAATGACTAAATGAAATTGAGACCTCAGAGTTTGGGGAACTCACTAGAACTAGAGGGAcagtgtgggggagggaactgggagatgttgatcaaaggatacaaagttttaggtattcaggaggaacgggtctgaagatcgctcgtacagctttgccactatagttgacaataccgtactctatacttgaaatttacccggagagtagt----ttttttaaaatatggaacacttcacgaatttgcctgtcattcttgtgcaggggccatgctagtcttttctgtatcgttccaattttagtatatgtgctgccaaggcgagcatgggagagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60531533 1170 + 64156825 ATTTTTATTCATGAATTTTAGAAATAAATCCTCAAAATGCACAATAATAAGATAAAACAATAAGCAGTGTTTTTACAGTGTGAAAATAAGCTtagatttattttttcctacgtgtaaccctctggtccaatgttatttatggagaagacattcttttccaccttaacccacatggcagcctctgtcaactataaagggactgtgtgtacacggatgtatttt--acactctttcctgcttagtggttctctgtgtccactctcacgaggatgctgcaccttatgtagccttagagaaccccttaacatttggtagcctgaatcctctaatttctccttcctctttaagattgccattattattattataggttatttgcttttccatgtgaatttgtaataatttttctcattttcaccaaaaacaatgcttgtaattttgttgtgactcccttaaatctacagataaagttctgtcctgtagaaacatcatgcaaaccacatacattcttttaaattcgctagaatccaaaataaaaagctaacaagaaacagataaaattaagttaagttaatcccatagacccataatatccttaacccaatagacccaaaatattaACCTAGTAGATCCAAaatattattttataatccaaatagactcaaaatattatcatttcaacatgtaatcaTGTGTCCTCTTGGAAAATATCAGATCCCTGTCTAGGTGGGCAAAGGTTTTTCTTTGTAATATCTAATTTCCACATTTCCACTTGGCGCAGAAACTGCCCCCAAGGTTCAGGATAATAAGAGGCAGTAGGAAGGGGTAGATGTATCTGCAGGAAAATGACTAAATGAAATTGAGACACCAGAGTTTGGGGAACTCACTAGAACTAcagggtcagtgtaggggagggaattgggagatgttgatcaaaggatgcaaagtttcaggtattcaggaggaatcggtctgaaggtctcttacacagcttggccactgtagttgacaacactgtactctatacttgaaatttaccaggagagtaga--ttttTTTTTTaatatggaacacttcacgaatttgcgtgtcatccttgcgcaggggccatgctaatcttctctgtatcgttccaagtttagtatatgtgctgcggaggcgagcaTGGGAGAGT i rheMac3.chr19 C 0 I 885 s macFas5.chr19 55653984 1170 + 59248254 ATTTTTATTCATGAATTTTAGAAATAAATCCTCAAAATGCACAATAATAAGATAAAACAATAAGCAGTGTTTTTACAGTGTGAAAATAAGCTTAGATTTATTTTTTCCTACGTGTAACCCTCTGGTCCAATGTTATTTATGGAGAAGACATTCTTTTCCACCTTAACCCACATGGCAGCCTCTGTCAACTATAAAGGGACTGTGTGTACACGGATGTATTTT--ACACTCTTTCCTGCTTAGTGGCTCTCTGTGTCCACTCTCACGAGGATGCTGCACCTTATGTAGCCTTAGAGAACCCCTTAACATTTGGTAGCCTGAATCCTCTAATTTCTCCTTCCTCTTTAAGATTGCCATTATTATTATTATAGGTTATTTGCTTTTCCATGTGAATTTGTAATAATTTTTCTCATTTTCACCAAAAACAATGCTTGTAATTTTGTTGTGACTCCCTTAAATCTACAGATAAAGTTctgtcctgtagaaacatcatgcaaaccacatacattcttttaaattcgctagaatccaaaataaaaagctaacaagaaacagataaaattaagttaagttaatcccatagacccataatatccttaacccaatagacccaaaatattaACCTAGTAGATCCAAaatattattttataatccaaatagactcaaaatattatcatttcaacatgtaatcaTGTGTCCTCTTGGAAAATATCAGATCCCTGTCTAGGTGGGCAAAGGTTTTTCTTTGTAATATCTAATTTCCACATTTCCACTTGGCACAGAAACTGCCCTCAAGGTTCAGGATAATAAGAGGCAGTAGGAAGGGGTAGATGTATCTGCAGGAAAATGACTAAATGAAATTGAGACACCAGAGTTTGGGGAACTCACTAGAACTAcagggtcagtgtaggggagggaattgggagatgttgatcaaaggatgcaaagtttcaggtattcaggaggaatcggtctgaaggtctcttacacagcttggccactgtagttgacaacactgtactctatacttgaaatttaccaggagagtaga--ttttttttttaatatggaacacttcacgaatttgcgtgtcatccttgcgcaggggccatgctaatcttctctgtatcgttccaagtttagtatatgtgctgcggaggcgagcatgggagagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47774183 1165 + 51301725 atttttattcatgaattttagaaataaatcctCAAAATGCACAATAATAAGATAAAACAATAAGCAGTGTTTTTACAGTGTGAAAATAAgcttagatttattttttcctacgTGTAACCCTCTGGTCCAATGTTATTTATGGAGAAGACATTCTTTTCTACCTTAACCCACACGGCAGCCTCTGTCAACTATAAAGGGACTTTGTGTACACGGATGTATTTT--ACACTCTTTCCTGCTTAGTGGCTCTCTGTGTCCACTCTCACGATGATGCTGCACCTTATGTAGCCTTAGAGAACCCCTTAACATTTGGTAGCCTGAATCCTCcaatttctccttcctctttaagattgccattattattattataggttatttgcttttccatgtgaatttgtaataatttttctcattttcaccaAAAACAATGCTTGTAATTTTGTTGTGACTCCCTTAAATCTACAGATAAAGTTCTGTCCTGTAGAAACATCATGCAAACCACATACATTCTTTTAAATTCGCTAGTatccaaaataaaaagctaacaagaaacagataaaattaatttaagttAATCCCATAGACCCATAATATCCTTAACCCAATAGACCCAAAATATTAACCTAGtagatccaaaatattattttataatccaAATAGactcaaaatattatcatttcaacatgtaatcatgTGTGCTCTTGGAAAATATCAGATCCCTGTCTAGGTGGGCAAAGGTTTTTCTTTGTAATATCTCATTTCCACATTTCCACTTGGTGCAGAAACTGCCCCCAAGGTTCAGGATAATAAGAGGCAGTAGGAAG-----GATGTATCTGCAGGAAAAtgactaaatgaaattgagacaccAGAGTTTGGGGAACTCACTAGAACTACAGGGTCAGTGTAGGGGAGGGAAttgggagatgttgatcaaaggatgCAAAGTTTCAGGTATTCAGGAGGAATCGGTCTGAAGGTCTCTTATACAGCTTGACCACTATAGTTGACAATACTGTACTCTATACTTGAAATTTACCAGgagaggaga--ttttttttttaatatagaacaCTTcacgaatttgcatgtcatccttgcgcaggggccatgctaatcttctctgtatcgttccaagtttagtatatgtgctgcagAGGCGAGCATGGGAGAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47492336 1155 + 50890351 ATTTTTATTCATGAATTTTAGAAATAAATCCTCAAAATGCACAAT-------------AATAAGCAGTGTTTTtacagtgtg-aaataagcttagatttattttttcctacgtgtaaccctctggtccaatgttatttatggagaagacattcttttccaccttaacccacacggcagcctctgtcaactataaagggattgtgcatacacggatgtatttt--acactctttcctgcttagtggctctctgtgtccactctcacgaggatcctgtaccttaggtagccttagagaaccccttaacattcggtagcctgaatcctctaatttctccttcctctttaagatggccattattattattataggctatttgcttttccatgtgaatttgtaatcatttttctcatttccacc-aaaacaatgcttgtaattttgttgtgactcccttaaatctacagaAAAAGTTctgtcctgtagaaacatcatgcaaaccacatacattcttttaaattcgctagtatccaaaataaaaagctaacaagaaacagataaaattaatttaagttaatcccatagacccataatatccttaacccaatagacccaaaatattaACCTAGTAGACCCAAaatattattttataatccaaatagactcaaaatattatcatttcaacatgtaatcaTGTGTCCTCTTGGAAAATATCAGATCCCTGTCTAGGTGGGCAAAGGTTTTTCTTTGTAATATCTCATTTCCACATTTCCACTGGGCACAGAAACTGCCCCCAAGGTTCAGGATAATAAGAGGCAGTAGGAAGGGGTAGATGTATCTGCAGGAAAATGACTAAATAAAATTGAGACACCAGAGTTTGGGGAACTCACTAGAACTAcagggtcagtgtaggggagggaattgggagacgttgatcaaaagatgcgaagtttcaggtattcaggaggaatcggtctgaaggtctcttacacagcttggccactatagttgacaatactgtactctatacttgaaatctaccaggagaggaga--ttttTTTTTTaatatggaacacttcacgaatttgcatgtcatccttgcacaggggccatgctaatcttctctgtatcgttccaagtttagtatatgtgctgcggaggcgagcaTGGGAGAGT i chlSab2.chr6 C 0 I 849 e calJac3.chr22 45773030 78353 + 49145316 I a score=-1685.000000 s hg38.chr19_GL949747v2_alt 514327 7 + 729520 aga-------------------tttt s panTro4.chr19 59785454 26 + 63644993 agattttttttttttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56699646 7 + 60714840 AGA-------------------TCtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103250275 7 - 106955855 aga-------------------tctt i nomLeu3.chr10 C 0 I 330 s macFas5.chr19 55655154 7 + 59248254 -------------------ccatctt i macFas5.chr19 C 0 I 841 s papAnu2.chr19 47775348 7 + 51301725 -------------------CAATCTT i papAnu2.chr19 C 0 I 72 e calJac3.chr22 45773030 78353 + 49145316 I e chlSab2.chr6 47493491 849 + 50890351 I e rheMac3.chr19 60532703 885 + 64156825 I a score=44966.000000 s hg38.chr19_GL949747v2_alt 514334 186 + 729520 ttttttttttttttttttgagctggagtcttgctctgtcacccaggctggagtgcagtggcgcgatctcggctcaccgcaagctccgcctcctgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgccctgctaattttttgtatttttagtag s panTro4.chr19 59785480 186 + 63644993 ttttttttttttttttttgagctggagtcttgctctgtcacccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctccagggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgctaccatgcccgggtaatttttggtatttttagtag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56699653 184 + 60714840 ttttttttttttttttctgagacggagtctcgctc--tcgcccacgctggagtgcagtgatgcagtcttggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccaagtagctgaaactacaggctcccgctaccatgcccggctaattttttgtatttttagtag i ponAbe2.chr19 C 0 I 604 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103250282 330 - 106955855 I e chlSab2.chr6 47493491 849 + 50890351 I e papAnu2.chr19 47775355 72 + 51301725 I e macFas5.chr19 55655161 841 + 59248254 I e rheMac3.chr19 60532703 885 + 64156825 I a score=13334.000000 s hg38.chr19_GL949747v2_alt 514520 141 + 729520 agacggggtttcactgtgttagccaggatggtctcgatctcctgacctcgtgatccgcctgcctcggcctcccaaagtactgggattacaggcatgagccaccacgcccggctgggagagtagatcttaagggtcctcacc s panTro4.chr19 59785666 141 + 63644993 agacggggtttcactgtgttagccaggatggtctcgatctcctgacctcgtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacgcccggctgggagagtagatcttaagggtcctcacc i panTro4.chr19 C 0 C 0 e ponAbe2.chr19 56699837 604 + 60714840 I e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103250282 330 - 106955855 I e chlSab2.chr6 47493491 849 + 50890351 I e papAnu2.chr19 47775355 72 + 51301725 I e macFas5.chr19 55655161 841 + 59248254 I e rheMac3.chr19 60532703 885 + 64156825 I a score=57475.000000 s hg38.chr19_GL949747v2_alt 514661 294 + 729520 acaaaaaaaaaaa-------aaagaaagaaagaaaaagaaaccata---------------------------ggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccaagacgggcagatcacttgaggtcaggagttcaagaccagcatggccaacatggtgaaaccctgtctctactaaaaatgc-aaacattagccaggcgtggtgacacaagcctgtaatcccagctactcag-gaggctgaggcacgagaattgctggaacctggga-gcggaggttgcagtgagccaagatggcaccactgcactctagcc s panTro4.chr19 59785807 301 + 63644993 acaaaaaaaaaaaaagaaagaaagaaagaaagaaaaagaaaccata---------------------------ggctgggcgcggtggctcacgcctgtaatcccagcactttgggaggccaagatgggcagatcacttgaggtcaggagttcaagaccagcatggccaacatggtgaaaccctgtctctactaaaaatac-aaacattagccaggcgtggtgacacaagcctgtaatcccagctactaag-gaggctgaggcacgagaatcacttgaacatggga-gcggaggttgcagtgagccaagatggcaccactgcactctagcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103250612 310 - 106955855 acaaaacaaaaaa-------gaaaaagaaatgaaacaataaccctgccaaatgatggatatgttaactagcttggccgggcgcggtggctcacgcttgtaatcccagcactttgggaggccgaggcaggcggatcac--gaggtcaggagatcgagac------------cacggtgaaaccccgtctctgctaaaaatacaaaaaattagccgggcgtggtggcgggcgcctgtggtcccagctactcggagaggctgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagccgagattgagccactgcactccagcc i nomLeu3.chr10 I 330 C 0 e ponAbe2.chr19 56699837 604 + 60714840 I e calJac3.chr22 45773030 78353 + 49145316 I e chlSab2.chr6 47493491 849 + 50890351 I e papAnu2.chr19 47775355 72 + 51301725 I e macFas5.chr19 55655161 841 + 59248254 I e rheMac3.chr19 60532703 885 + 64156825 I a score=14293.000000 s hg38.chr19_GL949747v2_alt 514955 59 + 729520 tgggggacagagtaagacttcctctc--aaaaaaaaaaaaaaaaaaaacaataaccctgcg s panTro4.chr19 59786108 58 + 63644993 tgggggacagagtaagaattcctctc---aaaacaaaaaaaaatgaaacaataaccctgcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56700441 61 + 60714840 tgggggacagaatgagacttcctctcaaaaaaaaaaaaagaaaTGaaacaataaccctgcc i ponAbe2.chr19 I 604 C 0 s nomLeu3.chr10 103250922 37 - 106955855 tgggtgaaaaagcgagactccgtctc----aaacaaaaaaa-------------------- i nomLeu3.chr10 C 0 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e chlSab2.chr6 47493491 849 + 50890351 I e papAnu2.chr19 47775355 72 + 51301725 I e macFas5.chr19 55655161 841 + 59248254 I e rheMac3.chr19 60532703 885 + 64156825 I a score=11280.000000 s hg38.chr19_GL949747v2_alt 515014 12 + 729520 agatgatggata s panTro4.chr19 59786166 12 + 63644993 agatgatggata i panTro4.chr19 C 0 I 3 s ponAbe2.chr19 56700502 12 + 60714840 agatgatggata i ponAbe2.chr19 C 0 I 3 s macFas5.chr19 55656002 12 + 59248254 agatgatggata i macFas5.chr19 I 841 I 3 s chlSab2.chr6 47494340 12 + 50890351 agatgatggata i chlSab2.chr6 I 849 I 3 e calJac3.chr22 45773030 78353 + 49145316 I e nomLeu3.chr10 103250959 0 - 106955855 C e papAnu2.chr19 47775355 72 + 51301725 I e rheMac3.chr19 60532703 885 + 64156825 I a score=1043813.000000 s hg38.chr19_GL949747v2_alt 515026 605 + 729520 taactagcttgactatgatgatcatgtcaccatgtatacatacatcaaaacatcaagtgtaatacaccttaaatatatacaatttccatttgtcaatcatatctcaataaagctaaaagaaACCTCTAAGTTTCAACTTTATTTTCAGAAAGCTGTGCCATGCTTACCTCAGTGCCTAAGTATACTCTAATTCATGGAAATGGCCTTTAAAACTGCAGAGAGTggctgggtgcagtggctcacgcctataatcccagcactttgggaggcggaggt------gggcagatcacgaggtcaggagttcgagatcagcctggccaacatggtgaaactctgtctctactaaaaatac-aaaaaatagctgggcatggtggcaggtgcctgtaaatctgagatactcaggaggctgagacaggagaatcgtttgaactggggaggcagaggttgcagtgagccgagatcctgccattgcactccagcctgggcgacagggtgagactccatctc-aaaaaaaaaaaaaaTACTGCAGAGAGTTAAGGCCCTCACTGGACACTCTCCGGTACCTCTGAGGTCAGTGGATAGAGAAGCAGCTCCCCTTCTTCTTCCTC s panTro4.chr19 59786181 605 + 63644993 taactagcttgactatgatgatcatgtcaccatgtatacatacatcaaaacatcaagtgtaatacaccttaaatatatacagtttccatttgtcaatcatatctcaataaagctaaaacaaACCTCTAAGTTTCAACTTTATTTTCAGAAAGCTGTGCCATGCTTACCTCAGTGCCTAAGTATACTCTAATTCATGGAAATGGCCTTTAAAACTGCAGAGAGTggctgggtgcagtggctcacgcctataatcccagcactttgggaggcggaggt------gggcagatcatgaggtcaggagttcgagatcagcctggccaacacggtgaaaccctgactctactaaaaatac-aaaaaatagctgggcatggtggcaagcgcctgtaaatctgagatactcaggaggctgagacaggagaatcgtttgaactggggaggcagaggttgcagtgagccgagatcctgccattgcactccagcctgggaaacagggtgagactccatctc-aaaaaaaaaaaaaaTACTGCAGACAGTTAAGGCCCCCACTGGACACTCTCCGGTACCTCTGACGTCAGTGGATAGAGAAGCAGCTCCCCTTCTTCTTCCTC i panTro4.chr19 I 3 C 0 s ponAbe2.chr19 56700517 596 + 60714840 taactagcttgactgtgatgatcatgtc---------acatacatcaaaacatcaagtgtaatacaccttaaatatatacaatttccatttgtcaatcatatctcaataaagctgaaagaaACCTCTAAGTTTCAACTTTATATTCAGAAAGCTGTGTCATGCTTACCTCAGTGCCTAAGTATACTCTAACTCACGGAAATGGCCTTTAAAACTGCAGAGAGTggctgggcgcagtggctcacgcctataatcccagcactttgggaggcggagga------gggtggatcacgaggtcaggagttcgagatcagcctggccaacatgatgaaactccatctctactaaaaacac-aaaaaatagctgggcttggtggcaagcacctgtaaatctgagatactcaggaggctgagacaggaaaatcgtttgaacccgggaggcagaggttgcagtgagccgagatcgtgccattgcactccagcctgggcaacagggtgaaactgcatctc-aaaaaaaaaaaaaaTACTGCAGAGAGTTAAGGCCCTCGCTGGCCACTCTCTGGTACCTCTGAGGTCAGTGGATAGAGAAGCAGCTCCCCTTCTTCTTCCTC i ponAbe2.chr19 I 3 C 0 s nomLeu3.chr10 103250959 605 - 106955855 -aactagcttaactgcgatgaccatgtcaccatgtatacatacatcaaaacatcaagtgtaatacaccttaaatatatacaatttccatttgtcaatcatatctcaatacagctgaaagaaacctcTAAGTTTCAACTTTATTTTCAGAAAGCTGTGCCATGCTTACCTCAGTGCCTAAGTATACTCTAATTCATGGAAATGGCCTTTAAAACTGCAGAGAGTAgctgggtgcggtggctcacacctataatcccagcactttgggaatcggaggc------aggtggatcatgaggtcaagagttcaagatcagcctggccaacatggtgaaactccgtctctactaaaaatac-aaaaaatagctgggcatggtggcaagcatctgtaaatctgagatactcaggaggctgagacaggagaattgcttgaacccaggaggcggaggttgcagtgagccgagatcgtgccattgcactccagcctgggtgacagggtgagactctatctcaaaaaaaaaaaaaaaaaCCGCAAAAAGTTAAGGCACTCGCTGGCCACTCTCCGGTACCTCTGAGGTCAGTGGATAGAGAAGCAGCTCCCCTTCTTCTTCCTC i nomLeu3.chr10 C 0 I 21 s rheMac3.chr19 60533588 608 + 64156825 taactagcttgactgtgatgatcatgtcaccatgtatacatacatcaaaacatgaagtgtaatacaccttaaatatatacaatttccatttgtcaatcatgtcgcaataaagctgaaagaaACCTCTAAGTTTCAACTTTATTTTCAGAAAGCTGTGCCATGCTTACCTCAGTACCGAAGTATACTCTAATTCATGGAAATTGCCTTTAAAACTGC--AGAGTggctggacgcagcggctcacacctataatcccagcactttgggaggtggaggtgaaggcgggcggatcatgaggtcaggagttcgagatcagcctggccaacatggtgaaactccgtctctactaaaaatacaaaaaaatagctgtgcgtggtgttgggcacctgt-aatctgagatactcaggaagctgaggaaggagaatcatttcaactcgggatgcggaggttgcagtgagccgagattgtgccattgcactccagcctgggcgaca-ggtgagactccacggc-aaaaaaaaaaaaaaTACTGCAGAGAGTTAAGGCCCTCGCTGGCCGCTCTCCGGTACCTCTGAGGTCAGTGGATAGAGAAGCAGCTCCCCTTCTTCTTCCTC i rheMac3.chr19 I 885 C 0 s macFas5.chr19 55656017 608 + 59248254 taactagcttgactgtgatgatcatgtcaccatgtatacatacatcaaaacatgaagtgtaatacaccttaaatatatacaatttccatttgtcaatcatgtcgcaataaagctgaaagaaACCTCTAAGTTTCAACTTTACTTTCAGAAAGCTGTGCCATGCTTACCTCAGTACCGAAGTATACTCTAATTCATGGAAATTGCCTTTAAAACTGC--AGAGTggctggacgcagcggctcacacctataatcccagcactttgggaggtggaggtgaaggcgggcggatcatgaggtcaggagttcgagatcagcctggccaacatggtgaaactccgtctctactaaaaatacaaaaaaatagctgtgcgtggtgttgggcacctgt-aatctgagacactcaggaagctgaggcaggagaatcatttcaactcgggatgcggaggttgcagtgagccgagattgtgccattgcactccagcctgggcgaca-ggtgagactccacggc-aaaaaaaaaaaaaaTACTGCAGAGAGTTAAGGCCCTCGCTGGCCGCTCTCCGGTACCTCTGAGGTCAGTGGATAGAGAAGCAGCTCCCCTTCTTCTTCCTC i macFas5.chr19 I 3 C 0 s chlSab2.chr6 47494355 607 + 50890351 taactagcttgactgtgatgatcatgtcaccatgtatacatacatcaaaacattaagtgtaatacaccttaaatatatacaatttccatttgtcaatcatgtcgcaataaagctgaaagaaACCTCTAAGTTTCAACTTTATTTTCAGAAAGCTGTGCCATGCTTACCTCAGTACCAAAGTATACTCGAATTCATGGAAATTGCCTTTAAAACTGC--AGAGTggctggacgcagcggctcacacctataatcccagcactttgggaggtggaggtgaaggcgggcggatcatgaggtcaggagttcgagatcagcctggccaacatggtgaaactctgtctctactaaaaatacaaaaaaatagctgtgcgtggtggcgggcacctgt-aatctgagatactcaggaggctgaggcaggagaatcgtttgaaccttggaggcagaggttgcagtgagccgagattgtgccattgcactccagcctgggcgaca--gtgagactccacggc-aaaaaaaaaaaaaaaaCTGCAGAGAGTTAAGGCCCTCACTGGCCGCTCTCCGGTACCTCTGAGGTCAGTGGATAGAGAAGCAGCTCCCCTTCTTCTTCCTC i chlSab2.chr6 I 3 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e papAnu2.chr19 47775355 72 + 51301725 I a score=178876.000000 s hg38.chr19_GL949747v2_alt 515631 76 + 729520 GAAACAAAGGCCTCCTTCCTTCTTAGGTGTTTGAGACAAATTCTCCACACAGGTGCAGCTGAGTGCTGTAAAGTCC s panTro4.chr19 59786786 76 + 63644993 GAAACAAAGGCCTCCTTCCTTCTTAGGCATTTGAGACACATTCTCCACACAGGTGCAGCTGAGCACTGTAAAGTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56701113 76 + 60714840 GAAACAAAGGCCTCCTTCCTTCTTAGGCGTTTGGGACAAATTCTCCACACAGGTGCAGCTGAGCACTGTAAAGTGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103251585 76 - 106955855 GAAACCAAGGCCTCCTTCCTTCTGAGGCGTTTGGGACAAATTCTCCACACAGGTGCAGCTGAGCACTGTAAAGTCC i nomLeu3.chr10 I 21 C 0 s rheMac3.chr19 60534196 76 + 64156825 GAAACAGAAGCCTCCTCCTTTCTTAGGCATTTGGGACAAATTCTCCACACAGGTGCAGCTGAGCACTGTAAAGTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55656625 76 + 59248254 GAAACAGAAGCTTCCTCCTTTCTTAGGCGTTTGGGACAAATTCTCCACACAGGTGCAGCTGAGCACTGTAAAGTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47775427 76 + 51301725 ggaaCAGAAGCCTCCTCCTTTCTTAGGCGTTTGGGACAAATTCTCCACACAGGTACAGCTGAGCACTGTAAAGTCC i papAnu2.chr19 I 72 I 19 s chlSab2.chr6 47494962 76 + 50890351 AAAACAGAAGCCTCCTCCTTTCTTAGGCGTTTGGGACAAATTCTCCACACAGGTGCAGCTAAGCACTGTAAAGTCC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 78353 + 49145316 I a score=1795.000000 s hg38.chr19_GL949747v2_alt 515707 2 + 729520 CA s panTro4.chr19 59786862 2 + 63644993 CA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56701189 2 + 60714840 CA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103251661 2 - 106955855 CT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60534272 2 + 64156825 CA i rheMac3.chr19 C 0 I 17 s chlSab2.chr6 47495038 2 + 50890351 CA i chlSab2.chr6 C 0 I 17 e calJac3.chr22 45773030 78353 + 49145316 I e papAnu2.chr19 47775503 19 + 51301725 I e macFas5.chr19 55656701 0 + 59248254 C a score=17577.000000 s hg38.chr19_GL949747v2_alt 515709 40 + 729520 CTGAGAGTTGAAGGTCCCCACTGCCAGTCACAGTTCGGTC s panTro4.chr19 59786864 40 + 63644993 CTGAGGGTTGAAGGTCCTCACTGCCAGTCACAGTTCGGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56701191 40 + 60714840 CTGAGGGTTGAAGGTCTCCATCGCCAGTCACGGTTTGGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103251663 40 - 106955855 TTGAGGGTTGAGGGTCCCCATCGCCAGTCACAGTTTATTC i nomLeu3.chr10 C 0 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e chlSab2.chr6 47495040 17 + 50890351 I e papAnu2.chr19 47775503 19 + 51301725 I e macFas5.chr19 55656701 0 + 59248254 C e rheMac3.chr19 60534274 17 + 64156825 I a score=34276.000000 s hg38.chr19_GL949747v2_alt 515749 43 + 729520 CCACTGAGGGTTGAAGGTCCCCACTGCCAGTCACAGTTTGGTC s panTro4.chr19 59786904 43 + 63644993 CCACTGAGGGTTGAAGGTCCCCACTGCCAGTCACAGTTCGGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56701231 43 + 60714840 CCACTGAGGGTTGAGGATCTCCACTGCCAGTCACACTTTGGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103251703 43 - 106955855 CCACTGAGGGTTGAGGGTCTCCACTGCCAGTCACAGTTTAGTG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47775522 43 + 51301725 CCATTGAGGGTTGAGGGTCTCCATTGCCAGTCACAGTTTGGGC i papAnu2.chr19 I 19 T 62 e calJac3.chr22 45773030 78353 + 49145316 I e chlSab2.chr6 47495040 17 + 50890351 I e macFas5.chr19 55656701 0 + 59248254 C e rheMac3.chr19 60534274 17 + 64156825 I a score=600.000000 s hg38.chr19_GL949747v2_alt 515792 1 + 729520 C s panTro4.chr19 59786947 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56701274 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103251746 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e chlSab2.chr6 47495040 17 + 50890351 I e papAnu2.chr19 47775565 62 + 51301725 T e macFas5.chr19 55656701 0 + 59248254 C e rheMac3.chr19 60534274 17 + 64156825 I a score=27751.000000 s hg38.chr19_GL949747v2_alt 515793 42 + 729520 CATTGAGGGTTGAGAGTCTCCACTGCCAGTCACAGTTTGGTC s panTro4.chr19 59786948 42 + 63644993 CACTGAGGGTTGAGGGTCTCCACTGCCAGTCACACTTCGGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56701275 42 + 60714840 CACTGAGGGTTGAGGGTCTCCATCGCCAGTCACAGTTTAGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103251747 42 - 106955855 CACTGAGGGTTGAGGGTCTCCAATGCCAGTCACAGTTTAGTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55656701 22 + 59248254 CAtcgagggtcgagggtctcca-------------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47775503 22 + 51301725 CATCGAGGGTCGAGGGTCTCCA-------------------- i papAnu2.chr19 T 62 C 0 e calJac3.chr22 45773030 78353 + 49145316 I e chlSab2.chr6 47495040 17 + 50890351 I e rheMac3.chr19 60534274 17 + 64156825 I a score=43987.000000 s hg38.chr19_GL949747v2_alt 515835 20 + 729520 CCATTGAGGGTTGAGAGTCT s panTro4.chr19 59786990 20 + 63644993 CCACTGAGGGTTGAGAGTCT i panTro4.chr19 C 0 I 1027 s ponAbe2.chr19 56701317 20 + 60714840 CCACTGAGTGTTGAGGGTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103251789 20 - 106955855 CCACTGAGGGTTGAGGGTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60534291 20 + 64156825 CCATTGAGGGTTGAGGGTCT i rheMac3.chr19 I 17 C 0 s macFas5.chr19 55656723 17 + 59248254 ---ttgagggttgagggtcT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47775525 17 + 51301725 ---TTGAGGGTTGAGGGTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47495057 20 + 50890351 ccattgagggttgagggtcT i chlSab2.chr6 I 17 C 0 e calJac3.chr22 45773030 78353 + 49145316 I a score=24331.000000 s hg38.chr19_GL949747v2_alt 515855 13 + 729520 CCACTGCCAGTCA-- s panTro4.chr19 59788037 13 + 63644993 CCACTGCCAGTCA-- i panTro4.chr19 I 1027 I 4123 s ponAbe2.chr19 56701337 13 + 60714840 CCACTGCCAGTCA-- i ponAbe2.chr19 C 0 I 733 s nomLeu3.chr10 103251809 13 - 106955855 CCAATGCCAGTCA-- i nomLeu3.chr10 C 0 I 217 s rheMac3.chr19 60534311 15 + 64156825 CCATTGCCAGTCACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55656740 15 + 59248254 CCATTGCCAGTCACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47775542 15 + 51301725 CCATTGCCAGTCACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47495077 15 + 50890351 CCATTGCCAGTCCCA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 78353 + 49145316 I a score=1552002.000000 s hg38.chr19_GL949747v2_alt 515868 693 + 729520 GTTTGGGCTTATTAGGGTTTATGCTGTGCACGGAGAATGGAACCTACCAATCAACTCTTAGTGACCAGTTAGACAGATTCAAGGCAAATTTCCCTGCTGGGAAATCCCAAATCCCAAAATATGCAGAGACCAATAGATGCCTCAATTCTTCCGTGTCTCCGTCTAAATCCTTGGGTCACTGTGACTCCTGTAGTTATGTGGCTTGTAATTCCTTGGGCCGTAGAATGGCTATGATAGGCCCTGTGCTAAGGGGACTGGTGACAGTTGAGACAGGAACATGGAAGCTATAGTAGTCAGGGTTCTCCAGAAAAAAAAATAATCAACACTAATAATGATAGATATATAGATAATGATTGATAG---------------------------------------ACAAATAAT----GATAGAT--------------ATATAATGATATCACAAATAATGATAGACATATAG-TTGGATAATGACAGATATATAATGATTGatacacagatagggtatttatatattggcttatgcaactatgtagactgacaggtccc-------------atgatctgccatctgcaagctggagacccaggggagtccacgtgtagttccagtctacgtgcaaaagtctgagaaccagtagagttagtggtatacgtaacagtccaaaagctagcaggctcatgccgggcatgatggctcacgcctgtaatccc--------aacactttgggagaccaag---gcaggcagatcacctgaggtca s panTro4.chr19 59792173 696 + 63644993 GTTTGGGCTTATTAGGGTTTATGCTGTGCACGGTGAATGGAACCTACCAATCCACTCTTAGTGACCAGTTAGACAGACTCAAGGCAAATTTCCCTGCTGGGAAATCCCAAATCCCAAAATATGCAGAGACCAGTAGATGCCTCAATTCTTCCGTGTCTCCCTCTAAATCCTTGGGTCACTGTGACTCCTGTAGTGATGTGGCTTGTAATTCCTTGGGCCGTAGAATGGCTGTGATAGGCCCTGTGCTAAGCGGACTGGTGACAGTTGAGACAGGAA-------GCTATAGTAGTCAGGATTCTCCAGAAAAAAAAATAATCAACACTCATAATgatagatatatagataaagattgatag---------------------------------------acaaataat----gatagatggataatgatagatatataATGATATCACAAATAATgataga----tag-atggataatgacaggtatataatgattgatacacagatagggtatttatatattggctcacgcaactatgtagactgacaggtccc-------------atgatctgccatctgcaagctggagacccaggggagtccacatgtagttccagtctacgtgcaaaagtctgagaaccaggagagtcagtggtatacgtagcagtccaaaagctagcaggctcatgccgggcatgatggctcacgcctgtaatccc--------aacactttgggagaccaag---gcaggcagatcacctgaggtca i panTro4.chr19 I 4123 C 0 s ponAbe2.chr19 56702083 703 + 60714840 GTTTGGGCTTATTAGGGTTTATGCTGTACAAAGAGAATGGAACCTACCAATCAACTCTTAGTGACCAGTTAGACAGATTCAAGGCAAATTTCCCTGCTGGGAAATCCCAGATCCCAAAATATGCAGAGACGAATAGATGCCTCAATTCTTCCGTGTCTCCGTCTAAATCCCTGGATCACTGTGACTCCTGTAGTTATGCGGCTTGTAATTCCTCGGGCCATAGAACGGCTATGATACGCCCTGTGCTAAGGGGATTGCTGACAGTTGAGACAGGAACGTGGAAGCTATAGTAGTCAGGGTTCTCCAGAAAAAAAAATAATCAACACTAATAATgatagatacatagataatgattgatag----------------------------------------caaataat----gatagatggataatgatagatatataACGATATCACAAATAATGAGAGG----CAGTATGGTTAATGACAGGTATATAATGATTGatacacagatagggtatttatatattggctcatgcaactatgtagactgacaggtccc-------------atgatctgccatctgcaagctggagacccaggggagtccacgtgtagttccagtctacgtgcaaaagtctgagaaccaggagagttagtggtatacataagagtccaaaagctgacaggctcattctgggcacgatggctcacgcctgtaatccc--------aacactttgggagaccaag---gcaggcagatcacctgaggtca i ponAbe2.chr19 I 733 C 0 s nomLeu3.chr10 103252039 711 - 106955855 GTTTGGGCTTATTAGGGTTTATGCTATGCACGGAGAATGGAACTTACCAATCAACTCTTAGTGACCAGTTAGACAGATTCAAGGCAAATTTCCCTACTGGGAAATCCCAAATCCCAAAACATGCAGAGACCAATAGATGCCTCAGTTCTTCTGTGTTTCCATCTAAATCCTTGGGTCACTGTGACTCCTGTAGTTATGTGGTTTGTAATTCCTTGGGCCGTAGAATGGCTATGATAGGCCCTCTGCTAAGGGGACTGGTGACAGTTGAGATAGGAACATGGAAGCTACAGTAGTCagggttctccagaaaaaaaa--aatcaatactaataatgatagatatatagatactgattgatag---------------------------------------acaAATAAT----GATAGAT--------------ATATAAT-ATATCACAAATAATGATAGACAGATAG-ATGGCTAATGACAGATATATAATGATTGATACCCAGATAGGGTATTTATATATTGGcttatgcaactatgtagactgacaggtcccatgatctgcccctatgatctgccatctgcaagctggagacccaggggagtccacgtgtagttccggtctacgtgcaaaagtctgagaaccaggagagtcagtggtatacataacagtccaaaagctggcagactcatgcggggcacgacggctcacacctgtgagccatctttgggatggctttgggagaccaag---gcaggcagatcacctgaggtca i nomLeu3.chr10 I 217 C 0 s rheMac3.chr19 60534326 746 + 64156825 GTTTGGGCTTGTTAGAG-TTATGCTGTACAAGGAGAATGGAACCTATCAATCAACTCTTAGTGACCAGTTAGACAGATTCAAGGCAAATTTCCCTACTGGGAAATCCTAAATCCCAAAATATGCAGAGACCAATAGACGCCTCAATTCTTCTGTGTCTCCGTCTAAATCCTTGGATCACTGTGATTCACATAATTATGTGGCTTGTAATTCCTCGGGCTGCAGAATGGCTACGATAGACCCTGTGCTAAGGGGATTGGTGACAGTTGAGACAGGAACATGGAAGCTATAGCAGTCAGGGTTCTCCAGAAAAAAAT--AATCAATACTAATGATgatagatatacaggtaatgattgatagtcaaataatgatagacagatggataatgataatgatatcacaaataat----gatagatggataatgatagatatatagtgatatcacaaataatgatagacagacag-gtggataACGGCAGGTATATAACGATTGatacacagatagggtatttatatattggcttatgcaactatggagactgacaggtccc-------------atgatctgccatctgcaagctggagacctaggaaagtccacctgtagttccagtctacgtgcaaaaatctgagaaccaagagagtcagcagtgtacataacagtccaaaagccggcaggctcattccaggcatggtggctcacgtctgtaatccc--------aacactttggaaggccaaggcagcaggcacatcacctgaggtca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55656755 741 + 59248254 GTTTGGGCTTGTTAGG------GCTGTACAAGGAGAATGGAACCTATCAATCAACTCTTAGTGACCAGTTAGACAGATTCAAGGCAAATTTCCCTACTGGGAAATCCTAAATCCCAAAATATGCAGAGACCAATAGACGCCTCAATTCTTCTGTGTCTCCGTCTAAATCCTTGGATCACTGTGATTCACATAATTATGTGGCTTGTAATTCCTCGGGCTGCAGAATGGCTACGATAGACCCTGTGCTAAGGGGATTGGTGACAGTTGAGACAGGAACATGGAAGCTATAGCAGTCAGGGTTCTCCAGAAaaaaat--aatcaatactaataatgatagatatacaggtaatgattgatagtcaaataatgatagacagatggataatgataatgatatcacaaataat----gatagatggataatgatagatatatagtgatatcacaaataatgataGACAGACAG-GTGGATAACGGCAGGTATATAACGattgatacacagatagggtatttatatattggcttatgcaactatggagactgacaggtccc-------------atgatctgccatctgcaagctggagacctaggaaagtccacctgtagttccagtctacgtgcaaaaatctgagaaccaagagagtcagcagtgtacataacagtccaaaagccggcaggctcATTccaggcatggtggctcacgtctgtaatccc--------aacactttggaaggccaaggcagcaggcacatcacctgaggtca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47775557 745 + 51301725 GTTTGGGCTTGTTAGGG-TTATGCTGTACCAGGAGAGTGGAACTTATCAATCAACTCTTACTGACCAGTTAGACAGATTCAAGGCAAATTTCCCTACTGGGAAATCCCAAATCCCAAAATATGCAGAGACCAATAGACGCCTCAATTCCTCTGTGTCTCCGCCTAAATCCTTGGATCACTGTGATTCACGTAGTTATGTGGCTTGTAATTCCTCGGGCTGCAGAATGGCTATGACAGACCCTGTGCTAAGGGGATTGGTGACAGTTGAGACAGGAACGTGGAAGCTATagcagtcagggttctccagaaaaaaat--aatcaatactaataatgatagatatataggtaatgattgatagtcaaataatgatagacagatggataatgataatgatatcacaaataatgatagatagatggataatgatagatatatagtgatatcacaaataacgatagacagatag-GTGGATAATGGCAGGTATATAATGGTTGATACACAGATAGGGTATTTATATATTGGCTTATGCAACTATGGAGACTGACAGGTCCc-------------atgatctgccatctgcaagctggagaccc-----agtcCATGTGTAGTTCCAGTCTACATGCAAAagtctgagaaccaggagagtcAGCAATGTACATAACAGTCCAAAAGCCAGCAGGCTCattccaggcacggtggctcacgtctgtaatccc--------aacactttggaaggccaaggcagcaggcacatcacctgaggtca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47495092 746 + 50890351 GTTTGGGCTTGTTAGAG-TTATGCTGTACAAGGAGAGTGGAACTTATCAATCAACTCTTACTGACCAGTTAGACAGATTCAAGGCAAATTTCCCTACTGGGAAATCCTAAATCCCAAAATATGCAGAGACCAATAGACGCCTCAATTCCTCTGTGTCTCCGTCTAAATCCTTGGATCACTGTGATTCACGTAATTATGTGGCTTGTAATTCCTCGGGCTGCAGAATGGCTACGACAGACTCTGTGCTAAGGGGATTGGTGACAGTTGAGACAGGAACATGGAAGCTATAGCAGTCAGGGTTCTCCAGAAaaaaat--aatcaatactaataatgatagatatataggtaatgattgatagtcaaataatgat----agatggataatgataatgatatcacaaataatgatagatagatggataatgataGATTTATAGTGATATCACAAATAGCGATAGACAGATAG-GTGGATAATGTCAGGTATATAATGATTGATACACGGATAGGGTATTTATATattggcttatgcaactatggagactgacaggtccc-------------atgatctgccatctgcaagctggagacccaggaaagtccatatgtcgttccagtctacatgcagaagtctgagaaccaggagagtcagcagtgtacataacagtccaaaagccggcaggctcattccaggcacggtggctcatgtctgtaatccc--------aacactttggaaggccaaggcagcaggcacatcacctgaggtca i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45773030 78353 + 49145316 I a score=2658180.000000 s hg38.chr19_GL949747v2_alt 516561 977 + 729520 gagttcaagaccagcccggccaacatggtgaaaccccatctttactaaaaatacaaaaattagccgggcatagtggcattcgcttgtaatcccagctactca-gaggctgaggtacgagaattgcttgaacccaagaggtgaaggttgcagtgagccgagatcatgccacagcactccagcctgggtgac-agagtgagactctatctcaaaaaaacaaacaaacaaaaaaa---------------------------------------------------------------------------------gctggcaggcttaacatctaaagagtcaatgttttagtgagagttcaagagccagaaaagactgatgtccaagcaaaaggaacttcatcttacattaccagttcaat-----gttttgttctattcaggtcccacctgattgaatgaggccgactcacattagggagagcaatctgctttataaattacactaattccattgataatctcattcagcaacacccccacagacacacacagaataatgtttaaccaaatatctcagcaccccatggcTACGTTACCATTCCTGTTCCACAAAAGGAGGAAACAAAAGAACAAAACCACACCAAATGTTGTGGTAAGTTGACAAAATCTGTTCCAGCCCATTAGTAAATATTGGCCACTGAAGTTCCTGAAATTCAAC-AATTAGTAAGTATCT-CTCTCCCAATAGAAAGCCACGTCATTTGTAAACCATAACAATAG-----------Cttttgtttttttgagacacagtctcgctctgtgttgcccaggct-ggagtgcagt-----gatcttggctcactgcaacctctgcctcctgggttcaagtggctctcctgcctcagccttccgagtagctggaattacaggcacccgccaccacacccaagtaattttttatatttttagtagagactgggtttcaccacattgaccaggctggtcttaaattcctgaactcaagtgattcacctgccttggcctcccaaagtgctgggattacaggcatgagctactgcac s panTro4.chr19 59792869 977 + 63644993 gagttcaagaccagcccggccaacatggcgaaacctcatctttactaaaaatacaaaaattagccgggcatagtggcattcgcttgtaatcccagctactca-gaggctgaggtacgagaattgcttgaacccaagaggtgaaggttgcagtgagccgagatcacgccacagcactccagcctgggtgac-agagtgagactctatctcaaaaaa-caaacaaacaaaaaaa---------------------------------------------------------------------------------gctggcaggctcaacatctaaagagtcaatgttttagtgagagttcaagggccagaaaagactgatgtccaggcaaaaggaacttcatcttacattaccagttcaat-----gttttgttctattcagttcccacctgattgaatgaggccgactcacattagggagagcaatctgctttataaattacactcattccattgataatctcattcagcaacacccccacagacacgcacagaataatgtttaaccagatatctcagcaccccatggcTACGTTACCATTCCTGTTCCACAAAAGGAGGAAACAAAAGAACAAAACCACACCAAATGTTGTGGTAAGTTGACAAAATCTGTTCCAGCCCATTAGTAAATATTGGCCACTGAAGTTCCTGAAATTCAACCAATTAGTAAGTATCT-CTCTCCCAATAGAAAGCCATGTCATTTGTAAACCATAACAATAG-----------Cttttgtttttttgagacacagtctcgctctgtgttgcccaggct-ggagtgcagt-----gatcttggctcactgcaacctctgcctcctgggttcaagtggctctcctgcctcagccttccgagtagctggaattacgggcacccgccaccacacccagctaattttttatatttttagtagagactaggtttcaccacattgaccaggctggtcttaaattcctgacctcaagtgattcacctgccttggcctcccaaagtgctgggattacaggcatgagctactgcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56702786 976 + 60714840 gagctcaagaccagcccagccaacacggcgaaaccccatcttaactaaaaatacaaaaattagccaggcatagtggcgctcgcttgttatcccagctactca-gaggctgaggtatgagaattgcttgaacccaagagatgaagtttgcagtgagccgagatcgcgccacagcactccagcctgggtgac-agagtgagactctatctcaaaaaa---------aaaaaaag---------------------------------------------------------------------------------gctggcaggctcaacatctaaagaggcaatgttttagtgagagttcaagagccagaaaagactgatgtccaggcaaaaggaacttcatcttacattaccagttcaat-----tttttgttctgttcaggtctcacctgattgaatgaggccgactcacattagggagagcaatctgctttataaattacactaagtccattgataatctcattcagcaacacccccacagacacacacagaataatgcttaaccaaatagctcagcaccccatggcTACGTTACCATTCCTGTTCCACAAAAGGAGGAAACAAAAGAACAAAACCACACCAAATGTTGTGGTAAGTTGACAAAATCTGTTCCGGCCCATTAGTAAATATTGGCCACTGAAGTTCCTGAAATTCAACCAATTAGTAAGTATCTCCTCTCCCAATAGAAAGCCATATCATTTGTAAACCGTAACAATAG------ttttttttttttttttttgagacatagtctctctctgtgtgtcccaggctaagagtgcagt-----gatcttggctcactgcaacctctgcctcctgggttcaagtggctctcctgcctcagccttccgagtagctggaattacaggcacccaccaccacacccagctaattttttgtatttttagtagagactgggtttcaccacgttgaccaggctgctcttaaattcctgacctcaagtgattcacctgccttggcctcccaaagtgctgggattacaggcatgagctactgcac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103252750 981 - 106955855 gagttcaagaccagcctggccaacatggcgaaaccccacctttactaaaaatacaaaaattagccgggcatagtggcgctcgcttgtaatcccagctactca-ggggctgaggtacgagaattgcttgaacccaagaggtgaaggttgcggtgagccgagatcgcaccacagcactccagcctgggcgac-agagtgagactctatctcaaaaaa-aaaaaaaaaaaaaaaa---------------------------------------------------------------------------------gctgccaggctcaacatctaaagagtcaatgtttcagtgagagttcaagagccagaaaagaccgacgtccaggcaaaaggaactccatcttacattaccagttcagt-----tttttgttctattcaggtctcacctgactgaatgaggccgactcacatgagggagtgcaatctgctttataaattacactaattccaacgataatctcattcagcaacacccccacagacacacacagaataatattgaaccaaatatctcagcaccccacggctacgtTACCATTCCTGTTCCACAAAAGGAGGAAACGAAAGAACAAAACCACACCAAACGTTGTGGTAAGTTGACACAATCTGTTCCGGCCCATTAGTAAATATTGGCCACTGAAGTTCCTGAAATTCAACCGATTAGTAAGTATCTCCTCTCCCAATAGAAAGCCATGTCATTTGTAAACCATAACAATAG--------tttttttgttttttttgagacatagtctcgctctgtgtgtcccaggct-ggagtgcagt-----gatcttggctcactgcaacctctgcctcccgggttcaggcggttctcctgcctcagccttccgagtagttggaatgacaggcacccgccaccacacctagctaattttttgtatttttagtagagactgggtttcaccacgttgaccaggctggtcttaaattcctgacctcaagtgattcacctgccttggcctcccaaagtgctgggattacaggcgtgagctactgcac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60535072 968 + 64156825 gagctcaagaccagcctggccaacatggcgaaattccatctttactaaaaatacaaaaattagccgggtgtagtggcgctcgcttggaatcccagctactca-gaggctgaggtacgagaattgcttgaacccaggaggtgaaggttacagtgagccgagatcgcaccacagcactccagcctgggtgac-agagtgagactctatctcaaaaaa----aaaaaaaaaaaaa---------------------------------------------------------------------------------gctagcaggcgcaacatctaaagagtcaatgcttcagtgagagttcaagggccagaaaagactgatgtccaggcaaaaggaacttcattttacattaccagttcaat-----tttttgttctgttcaggccccacctgattgaatgaggccgactcacattagggattgcaatctgctttataaattacactaattccaatgataatctcattcagaaacacccccacagacacacacagaataatgtttaaccaaatatctcggcaccccatggcTACGTTACCATTCCTGTTCCACAGAAAGAGG-------------AAACCACAGCAAACGTGGTGGTAAGTTGACGCAATCTGTTCCGGCCCACTAGTAAATGATGGCCACTGAGGTTCCTGAACTTCAACCAATT----AGTATCT-CTCTCCCAATAGAAAGCCGTATCATTTGTAAACCATAACAACCGtttttcttgtttttttgcttttttgagacacagtctcgctctgcattgcccaggct-ggagtgcagt-----gatcttggctcactgcaacttctgccttctgggttcaagtgactctcctgcctcagccttctgagtagctggaattccaggctcccaccaccacacccagctaattttttgtatttttagtagagactgggtttcaccatattgaccaggctggtgttaaattcctgaccttaagtgattcacccaccttggcctcccaaagtgctgggattataggcgtgagctactgcac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55657496 1049 + 59248254 gagctcaagaccagcctggccaacatggcgaaattccatctttactaaaaatacaaaaattagccgggtgtagtggcgctcgcttgtaatcccagctactca-gaggctgaggtacgagaattgcttgaacccaggaggtgaaggttacagtgagccgagatcgcaccacagcactccagcctgggtgac-agagtgagactctatctcaaaaaa----aaaaaaaaaaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgctagcaggcgcaacatctaaagagtcaatgcttcagtgagagttcaagggccagaaaagactgatgtccaggcaaaaggaacttcattttacattaccagttcaat-----tttttgttctgttcaggccccacctgattgaatgaggccgactcacattagggattgcaatctgctttataaattacactaactccaatgataatctcattcagaaacacccccacagacacacacagaataatgtttaaccaaatatctcggcaccccatggcTACGTTACCATTCCTGTTCCACAGAAAGAGG-------------AAACCACAGCAAACGTGGTGGTAAGTTGACGCAATCTGTTCCGGCCCACTAGTAAATGATGGCCACTGAGGTTCCTGAACTTCAACCAATT----AGTATCT-CTCTCCCAATAGAAAGCCGTATCATTTGTAAACCATAACAACCGtttttcttgtttttttgcttttttgagacacagtctcgctctgcgttgcccaggct-ggagtgcagt-----gatcttggctcactgcaacttctgccttctgggttcaagtgactctcctgcctcagccttctgagtagctggaattccaggctcccaccaccacacccagctaattttttgtatttttagtagggactgggtttcaccatattgaccaggctggtcttaaattcctgaccttaagtgattcacccaccttggcctcccaaagtgctgggattataggcgtgagctactgcac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47776302 976 + 51301725 gagctcaagaccagcctgaccaacatggcgaaattccatctttactaaaaatacaaaaattagccgggtgtagtggcgctcgcttgtaatcccagctactca-gaggctgaggtacgagaattgcttgaacccaggaggtgaaagttacagtgagccgagatcgcgccacagcactccagcctgggtgac-agagtgagactctatctaaaaaaa----aaaaaaaaaaaaa------------------------------------------------------------------------aaaaaaaaagctagcagGCGCAACATCTAAAGAGTCAGTGCTTCAGTGAGAGTTCAAGGGCCAGAAAAGACTGATGTCCAGGCAAAAGGAACTTCATTTTACATTACCAGTTCaat-----tttttgttctgttcaggcccCACCTGATTGAATGAGGCCGACTCACATTAGGGATTGCAAtctgctttataaattacactaACTCCAATGATAATCTTATTCAGAAACacccccacagacacacacagaataatgtttaaccaaatatctcgGCACCCCATGGCTACGTTACCATTCCTGTTCCACAGAAAGAGG-------------AAACCACAGCAAACGTGGTGGTAAATCGACGCAATCTGTTCCGGCCCACTAGTAAATGATGGCCACTGAGGTTCCTGAACTTCAACCAATT----AGTATCT-CTCTCCCAATAGAAAGCCGTATCATTTGTAAACCATAACAAccg-ttttcttgtttttttgcttttttgagacacagtctcgctctgtgttgcccaggct-ggagtgcagt-----gatcttggctcactgcaacttctgccttctgggttcaagtgactctcctgcctcagccttccgagtagatggaattacaggctcccaccaccacctccagctaactttttgtatttttagtagggactgggtttcaccatattgaccaggctggtcttaaattcctgacctcaagtgattcacccaccttggcctcccaaagtgctgggattataggcgtgagctactgcac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47495838 964 + 50890351 gagctcaagaccagcctggccaacatggcgaaattccatctttactgaaaatacaaaaattagccgggtgtagtggcgctcactcgtaatcccagctactca-gaggctgaggtacgagaattgcttgaacccaggaggtgaagcttacagtgagccgagatagcgccacagcactccagcctgggtgac-agagtgagactctatctcaaaaaa----aaaaaaaaaa------------------------------------------------------------------------------------gctagcaggcgcaacatctaaagagtcaatgcttcagtgagagttcaagggccagaaaagactgatgtccaggcaaaaggaacttcattttacattaccagttcaat-----tttttgttctgttcaggccccacctgattgaatgaggccaactcacattagggattgcaatctgctttataaattacactaactccaatgataatctcattcagaaacacccccacagacacacacagaataatgtttaaccaaatatctcggcaccccatggcTACGTTACCATTCCTGTTCCACAGAAAGAGG-------------AAACCACAGCAAACGTGGTGGTAAGTTGACGCAATCTGTTCCGGCCCACTAGTAAATGATGGCCACTGAGGTTCCTGAACTTCAACCAATT----AGTATCT-CTCTCCCAATAGAAAGCCGTATCATTTGTAAACCATAACAACCG-ttttcttgtttttttgcttttttgagacacagtctcgctctgtgttgcccaggct-ggagtgcagt-----gatcttggctcactgcaacttctgccttctgggttcaagtgactctcctgcctcagccttccgagtagctagaattacaggctcccaccaccacacccagctaattttttgtatttttagtagggactgggtttcaccatattgaccaggctggtcttaaattcctgacctcaagtgattcacccgccttggcctcccaaagtgctgggattataggcgtgagctaccgcac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45851383 943 + 49145316 gaattcgagaccagcctggtcaacacggagaaaccccatctctactaaaaatat-ataattagccaggtatagtgtcacatgcctgtaattccaactactcaggaggctgaggcaggagaatcgctggaacccaggaggtggagatggtggtaagccaagatcgtgccattgcgctccagcctgggcaacaagagcaaaactctatctcaaggga------gaaaaaaaaCA------------------------------------------------------------------------------------------------------------------CCagatggatgtccaggctcaaaacag--------ttaggcaggaagaacttcatcttgtattaccacttggatttttgtttttattctattcaggtcccaactggttgaatgaggccaactcccatcggagagtgcaacctgccttataaatgctaccaactccagtgataatctcactcagaaacacccccacagacagacacagagtaacgtttaaccaaatgtctgggca-cccGTGGTGATTTTAACATTCCTGTTTCACCAAATGAGAAAACAAAACA---AAACCTTCTCCAACGTTGTGGGAAGTTGACACAATCGGTCCCTGCCCATTAATAAATGTCAGCCACTGAGGTTCCCGAAATTCGGCCAATTAGTAAGTATCT-CTCTCCCAACAGAAAGCCATGTCATTTGTAAACAATAACAATAG----TAttttttttttttttttttgagacacagtctcactctg--tcgcccaggct-ggagtgcagtggcacgatctcagctcactgcaacctccgcctcccaagttcaagtgattctcctgccacaggctcccgagtagctgggattacaggtggctgccaccacgcctggctaacttttcacatttttagtagagatggggtttcactatgttggccaggcgggtctcaaactcctgacttcaggtgatccacccatctcggcctctcaaagtgctgggattacaggcgtgagccaccgcac i calJac3.chr22 I 78353 C 0 a score=418164.000000 s hg38.chr19_GL949747v2_alt 517538 175 + 729520 ccagccAACAATAGTATTTTTAATTAGGTCATCCTGCCTTTACAATC----------------------TCTGCATTTTAAATACTCAACTAAGAGTACAGCCATTATTTGTCTTTCACCCAAAGTCCCATTCAAGTGAGAACAAAGGAATGAATAAATAAGGCATAAGTAACAA----AACAACAAAAAAAGAAAATTAG s panTro4.chr19 59793846 175 + 63644993 ccagccAACAATAGTATTTTTAATTAGGTCATCCTGCCCTTACAATC----------------------TCTGCATTTTAAATACTCAACTAAGAGTACAGCCATTATTTGTCTTTCACCCAAAGTCCCATTCAAGTGAGAACAAAGGAATAAATAAATAAGGCATAAGTAACAA----AACAACAAAAAAAGAAAATTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56703762 175 + 60714840 ccagccAACAGTAGTATTTTTAATTATGTCATCCTGCCTTTACAATC----------------------TCTGCATTTTAAATACTCAACTAAGAGTACAGCCATTATTTGTCTTTCACCCAAAGTCCCATTCAAGTGAGAACAAAGGAATAAATAAAGAAGGCATAAGTAACAA----AACAACAAAAAAAGAAAATTAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103253731 176 - 106955855 ccagccAACAATAGTATTTTTAATTAGGTCATCCTGCCTTTACAATC----------------------TCTGCATTTTAAAAACTCAACTAAGAGTACAGCCATTATTTGTCTTTCACCCAAAGTCCCATTCAAGTGAGAACAAAGGAATAAATAAATAAGGCATAAGTAACAA---CAGCAACAAAAAAAGAAAATTAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60536040 201 + 64156825 cTAGTCAACAATAGTATTTTTAATCAGGTCATCCTGCCTTTACAATCTATGAATTTTCCACTACTCCTATCTGCACTTTAAATACTCAACTAAGAGTACAGCCATTACTTGTCTTTCACCCAAAGTCCCATTCAAGTGAGAACAAAGGAATAAATAAATAAGGCATAAGTAACAACAACAACAATGACAAAAGAAAATTAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55658545 201 + 59248254 cTAGTCAACAATAGTATTTTTAATCAGGTCATCCTGCCTTTACAATCTATGAATTTTCCACTACTCCTATCTGCACTTTAAATACTCAACTAAGAGTACAGCCATTACTTGTCTTTCACCCAAAGTCCCATTCAAGTGAGAACAAAGGAATAAATAAATAAGGCATAAGTAACAACAACAACAATGACAAAAGAAAATTAG i macFas5.chr19 C 0 I 850 s papAnu2.chr19 47777278 201 + 51301725 ctagtCAACAATAGTATTTTTAATCAGGTCATCCTGCCTTTACAATCTATGAATTTTCCACTACTCCTATCTGCACTTTAAATACTCAACTAAGAGTACAGCCATTACTTGTCTTTCACCCAAAGTCCCATTCAAGTGAgaacaaaggaataaataaataaggcataagtaacaacaacaacaatgacaaaagaaAAGTAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47496802 201 + 50890351 cTAATCAACAATAGTATTTTTAATCAGGTCATCCTGCCTTTACAATCTATGAATTTTCCACTACTCCTCTCTGCATTTTAAATACTCAACTAAGAGTACAGCCATTACTTGTCTTTCACCCAAAGTCCCATTCATGTGAGAACAAAGGAATAAATAAACAAGGCATAAGTAACAACAACAACAATGACAAAAGAAAATTAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45852326 0 + 49145316 C a score=13420.000000 s hg38.chr19_GL949747v2_alt 517713 6 + 729520 AATGCA s panTro4.chr19 59794021 6 + 63644993 AATGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56703937 6 + 60714840 AATGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103253907 6 - 106955855 AATGTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60536241 6 + 64156825 AATGTG i rheMac3.chr19 C 0 I 281 s macFas5.chr19 55659596 6 + 59248254 AATGTG i macFas5.chr19 I 850 C 0 s papAnu2.chr19 47777479 6 + 51301725 AATGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47497003 6 + 50890351 AATGTG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45852326 0 + 49145316 C a score=565026.000000 s hg38.chr19_GL949747v2_alt 517719 233 + 729520 GTCAATTTCATGCAATCATCAACACCAAATTTCCAGAACGTAGTATTTCCAAATTTCCCGAACGTAAATATGTATGTGGAAATTAACAAAATGTGGCAAAACAAAAGGTCACTTAAATTTGCACAAATGAAACAGTCAACATGGAAGCTGATCGGCTTTCTGAAATATGGGACAAGCTCAGGACTTCAAAATActtcg-gcgttggaagggctaagttatgatgtattaaaatg s panTro4.chr19 59794027 233 + 63644993 GTCAATTTCATGCAATCATCAACACCAAATTTCCAGAACGTAGTATTTCCAAATTTCCTGAACGTAAATATGTATGTGGAAATTAACAAAATGTGGCGAAACAAAAGGTCACTTAAATTTGCACAAATGAAACAGTCAACATGGAAGCTGATCTGCTTTCTGAAATATGGGACAAGCTCAGGACTTCAAAATACTTCG-GCGTTGGAAGGGCTAAGTTATGATGTATTAAAATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56703943 233 + 60714840 GTCAATTTCATGCAATCATCAACACCAAATTTCCAGAACATAATATTTCCAAATTTCCTGAACGCAAATATGTATGTGGAAATTAACAAAATGTGGCGAAACAAAAGGTCACTTAAATTGGCACAAACGAAACAGTCAACATGGAAGCTGATCTGCTTTCTGAAATATGGGACAAGCTCAGGACTTCAAAATACTTCG-GCGTTGGAAGGCCTAAGTTATGATGTATTAAAATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103253913 233 - 106955855 GTCAATTTCATGCAATCATCAACACCAAATTTCCAGAACGTAATATTTCCAAATTTCCTGAACGTAAATATGCATGTGGAAATTAACAAAATGTGGCGAAACAAAAGGTCACTTAAATTTGCACAAATGAAACAGCCAACATGGAAGTTGATCTGCTTTCTGAAATATAGGACAAGCTCAGGACTTCAAAATACTTCG-gcattggaaggcctaagttatgatatattaaaatg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60536528 234 + 64156825 GTCAATTTCATGCAATCATCAACACCAAATTTCCAGAACATAATATTTCCAAATTTCCTGAACGTAAATACGTATGTGGAAATTAACAAAATGTGGTGAAACAAAAGATCACTTAAATTTGCACAAATGAAACAGCCAACGTGGAAGCGGATCTGCTTTCTGAAATATGGGACAAGCTCAGGACTTCAAACTACTTCGTGCGTTGGAAGGCCTAAGTGATGACGTATTAAAATG i rheMac3.chr19 I 281 C 0 s macFas5.chr19 55659602 234 + 59248254 GTCAATTTCATGCAATCATCAACACCAAATTTCCAGAACATAATATTTCCAAATTTCCTGAACGTAAATACGTATGTGGAAATTAACAAAATGTGGTGAAACAAAAGATCACTTAAATTTGCACAAATGAAACAGCCAACGTGGAAGCGGATCTGCTTTCTGAAATATGGGACAAGCTCAGGACTTCAAACTACTTCGTGCGTTGGAAGGCCTAAGTGATGACGTATTAAAATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47777485 234 + 51301725 GTCAATTTCATGCAATCATCAACACCAAATTTCCAGAACATAATATTTCCAAATTTCCTGAACGTAAATACGTATGTggaaattaacaaaatgtggtGAAACAAAAGATCACTTAAATTTGCACAAATGAAACAGCCAACGTGGAAGCGGATCTGTTTTCTGAAATATGGGACAAGCTCAGGACTTCAAACTACTTCGCGCGTTGGAAGACCTAAGTGATGAcgtattaaaatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47497009 234 + 50890351 GTCAATTTCATGCAATCATCAACACCAAATTTCCAGAATATAACATTTCCAAATTTCCTGAACGTAAATACGTATGTGGAAATTAACAAAATGTGGTGAAACAAAAGGTCACTTAAATTTGCACAAATGAAACAGCCAACGTGGAAGCGGATCTGTTTTCTGAAATATGGGACAAGCTCAGGACTTCAAACTACTTCGCGCGTTGGAAGGCCTAAGTGATGATGTATTAAAATG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45852326 0 + 49145316 C a score=6370.000000 s hg38.chr19_GL949747v2_alt 517952 7 + 729520 aaaataa s panTro4.chr19 59794260 7 + 63644993 AAAATAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56704176 7 + 60714840 AAAATAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103254146 7 - 106955855 aaaataa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60536762 7 + 64156825 AAAATAA i rheMac3.chr19 C 0 I 4 e calJac3.chr22 45852326 0 + 49145316 C e chlSab2.chr6 47497243 0 + 50890351 C e papAnu2.chr19 47777719 0 + 51301725 C e macFas5.chr19 55659836 0 + 59248254 C a score=146661.000000 s hg38.chr19_GL949747v2_alt 517959 309 + 729520 aG-TGgggcgcggtggctcatgcctgtaatcccagcactttgggggaccgaagtgggtggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtttctactgaaaatacaaaaaaaattagccgggcgtggtggcgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatagcatgaacccgggaagtggagcttgcagtgagctgagatcacgccactgcactccagcctgggcgacagagcaagactccgtctcaaaaaaaaaaaaagaataaata-----aaat s panTro4.chr19 59794267 307 + 63644993 Aggcggggtgcggtggctcacgcctgtaatcccagcactttggggggccgaagtgggtggatcacgaggtcaggagatcgagaccatcctggctaagacggtgaaaccccgtttctagtgaaaatacaaaaaaa-ttagccaggcgtggtggcaggtgcttgtagtcccagctactcgggaggctgaggcaggagaatggcatgaacccgggaagtggagcttgcagtaagctgagatcacgccactgcactccagcctgggcgacagagcaagactccgtctcaaaaaaaaaaa--gaataaata-----aaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56704183 305 + 60714840 Aggctgggcatggtggctcacgcctgtaatcccggcactttgggaggccgaagtgg---------gagatcaggagatcgagaccatcctggctaacatggtgaaaccccgtttctactgaaaatacaaaaaaa-ttagccaggcgtggcggcaggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaaccccggaggcagagcctgcagtgagccgagatctcgccactgcactccagcctgggcgacagagtgagactccgtctcaaaaaaaaaaaaaaaaaaaaaaagaataaaT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103254153 308 - 106955855 aggctgggcacggtggctcacgcctgtaatcccagcactttgggaggccgaagtggatggatcacgaggtcaggagatccagaccatcctggctaacacggtgaaacccggtttctactgaaaatacaaaaaaa-ttagccgggcgtggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccaggaggtggagcttgcagtgagccgagatcccaccactgcactccagcctgggcgatagagcaagactccgtctcaaaaaaaaaaa-agaataaata-----aaat i nomLeu3.chr10 C 0 C 0 e calJac3.chr22 45852326 0 + 49145316 C e chlSab2.chr6 47497243 0 + 50890351 C e papAnu2.chr19 47777719 0 + 51301725 C e macFas5.chr19 55659836 0 + 59248254 C e rheMac3.chr19 60536769 4 + 64156825 I a score=17444.000000 s hg38.chr19_GL949747v2_alt 518268 11 + 729520 aaaaTAAAATA s panTro4.chr19 59794574 11 + 63644993 aaaaTAAAATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56704488 11 + 60714840 AAAATAAAATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103254461 11 - 106955855 aaaataaaata i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55659836 11 + 59248254 AAAATAAGATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47777719 11 + 51301725 aaaataagatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47497243 11 + 50890351 AAAATAAGATA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45852326 0 + 49145316 C e rheMac3.chr19 60536769 4 + 64156825 I a score=271054.000000 s hg38.chr19_GL949747v2_alt 518279 118 + 729520 GTAGAAGGTTTAATTAGGAATATTTCACTCTCCATACCTGAAGAATTCGTGATAGCCAGGAGTCtacaatcaaaataacataaataataaga-taaaaataaaattaatttgaagccat s panTro4.chr19 59794585 118 + 63644993 GTAGAAGGTTTAATCAGGAATATTTCACTCTCCAGACTTGAAGAATTCGTGATAGCCAGGAGTCTACAATCAAAATAACATAAACAATAAGA-TAAAAATAAAATTAATTtgaagccat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56704499 118 + 60714840 GTAGAAGGTTTAATTTGGAATATTTCACTTTCCATACTTGAAGAAATCGTGATAGCCAGGAGTCTACTATCaaaataatataaataataaga-taaaaataaaattaatttgaagccat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103254472 118 - 106955855 gtagaAGGTTTAATTTGGAATATTTCGCTCTCCATACTTGAAGAATTCGTGATAACCAGGAGTCTACAAtcaaaataacataaataataaga-taaaaataaaattaatttgaagccat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60536773 119 + 64156825 GTAGAAGGTTTAATCTCGAATATTTCACTTTCCACACTTGAAGAGTTCATGATAGCCAGGAGTCTACAATCAAAACAACataaataataagattaaaaataaaattaatttGAAGCCAT i rheMac3.chr19 I 4 I 298 s macFas5.chr19 55659847 119 + 59248254 GTAGAAGGTTTAATCTCGAATATTTCACTTTCCACACTTGAAGAGTTCATGATAGCCAGGAGTCTACaatcaaaacaacataaataataagattaaaaataaaattaaTTtgaagccat i macFas5.chr19 C 0 I 309 s papAnu2.chr19 47777730 119 + 51301725 ttaGAAGGTTTAATCACGAATATTTCACTTTCCACACTTGAAGAGTTCATGATAGGCAGGAGTCTACAatcaaaacaacataaataataagattaaaaataaaattaatttgaagccat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47497254 119 + 50890351 GTAGAAGGTTTAATCTCGAATATTTCACTTTCCACACTTGAAGAGTTCATGCTAGCCAGGAGTCTACAATCAAAACAACATAAATAATAAGATTAAAAATAAAATTAATTtgaagccat i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45852326 0 + 49145316 C a score=1010122.000000 s hg38.chr19_GL949747v2_alt 518397 441 + 729520 aaaaaaagaatgagttcatatgttttgtggaaacatggatggagctggaggccattatccttagcaaactatacaagaacagaacaccaaatacagcaggttctcacttataagtggaagctaaataatagaactcatgaacacaaaaaagggaaa-aacagacaatggggtctcctttagggtggagggtgggaggcgggaaaggagcaggaaaagtaactattaggtaccaagcttattacctaggtgatgaaataatctgtacaacaaacccccatgacacaagtttacctgtataacaaaccttcccatgtacccttgaacctaaaataaaagtt--aaaaaaatactcaatgagcaacaatgtacattatttgaggataattatattaaaagcccagacttcaccactacacaaaatatccacgtaataaaatttcact s panTro4.chr19 59794703 442 + 63644993 aaaaaaagaatgagttcatatgttttgtggaaacatggatggagctggaggccattatccttagcaaactatacaagaacagaacaccaaatacagcatgttctcacttataagtggaagctaaataatagaactcatgaacacaaaaaaggggaacaacagacaatggggtctcctttagggtggagggtgggaggcgggaaaggagcaggaaaagtaactattaggtaccaagcttattacctaggtgatgaaataatctgtacaacaaacccccatgacacaagtttacctgtataacaaaccttcccatgttcccttgaacctaaaataaaagtt--aaaaaaatactcaatgagcgacaatgtacattatttgaggataattacattaaaagcccagacttcaccactacacaaaatatccatgtaataaaatttcact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56704617 440 + 60714840 -aaaaaagaatgagttcatatcttttgtggaaacatggatggagctggaggccattatccttagcaaactatacaagaacagaaaaccaaatacagcatgttctcacttataagtggaatctaaataat-gaactcatgaacacaaaaaagggaac-aacagacaatggggtctcctttagggtggagggtgggaggctggaaaggagcaggaaaagtaactattaggtaccaagcttattacctaagttatgaaataatctgtacaacaaacccccatgacacaagtttacctgtatgacaaaccttcacatgtacccttgaacctaaaataaaagtt-aaaaaaaaCACTCAATAAGCGacaatgtacattctttgaggataattacattaaaagcccagacttcactactacacaaaatatccatgtgacaaaatttcact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103254590 439 - 106955855 -aaaaaagaatgagttcatatcttttgtggaaacatggatggagctggaggccattatccttagcaaactatacaagaatagaaaaccaaatacagcatgttctcacttataagtggaagctaaataat-gaactcatgaacacaaaaaaagggaacaacagacaatggggtctcctttagggtggagggtgggaggcaggaaaggagcaggaaaagtaactattaggtaccaagcttattacctaggtgatgaaataatctgtacaacaaacccccatgacacaagtttatctgtataacaaaccttcacatgtactcttgaaccgaaaataaaagtt---aaaaaatacttaatgagtgacaatgtacattatttgaggataattacattaaaagcccagacttcaccactacacaaaatatccatgtaacaaaatttcact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60537190 438 + 64156825 Aaaaaaagaatgagttcatatcttttgtgggaacatggatggagctggaggccattatccttagcaaagtatacaagaacagaaaaccaaatacagcatgttctcacctatgagtggaagctaaataatagaactcatgaacacgaagaagggaac-aacagacaatggggtctcctttagggtggaggatgggaggcgggataggagcaggaaaagcaacacttctgtactaggcttggtgcctaggtaatgaaataatctgtacaacaaacccccatgacacaagcgtacctgtagaacaaaccttcacatgtacccttgaacc-----taaaagttaaaaaaaaaaacttaatgagcaacaatgtacattatttaaggataattacattaaaagcccagacttcaccaccacacaaaatatccatgtaacaaaatttcact i rheMac3.chr19 I 298 C 0 s macFas5.chr19 55660275 438 + 59248254 aaaaaaagaatgagttcatatcttttgtgggaacatggatggagctggaggccattatccttagcaaagtatacaagaacagaaaaccaaatacagcatgttctcacctatgagtggaagctaaataatagaactcatgaacacgaagaagggaac-aacagacaatggggtctcctttagggtggaggatgggaggcgggataggagcaggaaaagcaacacttctgtactaggcttggtgcctaggtaatgaaataatctgtacaacaaacccccatgacacaagtgtacctgtataacaaaccttcacatgtacccttgaacc-----taaaagttaaaaaaaaaaacttaatgagcaacaatgtacattatttaaggataattacattaaaagcccagacttcaccaccacacaaaatatccatgtaacaaaatttcact i macFas5.chr19 I 309 C 0 s papAnu2.chr19 47777849 436 + 51301725 -aaaaaagaatgagttcatatcttttgtgggaacatggatggagctggaggccattatccttagcaaagtatacaagaacagaaaaccaaatacagcatgttctcacctatgagtggaagctaaataatagAACTCATGAACAcgaagaagggaac-aacagacaatgGGGTCTCCTttagggtggaggatgggaggcgGGATAGGAGCAGGAAAAGCAACACTTCTGTACTAGGCTTGGTGCctaggtaatgaaataatctgtacaacaaacccccatgacacaagtgtacctgtataacaaaccttcacatgtacccttgaacc-----taaaagtt-aaaaaaaaaacttaatgagcgacaatgtacattatttgaggataattacattaaaagcccagacttcaccaccacacaaaatatccatgtaacaaaatttcact i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47497373 428 + 50890351 -ataaaagaatgagttcatatcttttgtgggaacatggatggagctggaggccattatccttagcaaagtatacaagaacagaaaaccaa-------atgttctcacctatgagtggaagctaaataatagaactcatgaacacgaagaagggaac-aacagacaatggggtctcctttagggtggaggatgggaggcgggataggagcaggaaaagcaacacttctttactaggcttggtgcctaggtaatgaaataatctgtacaacagacccccatgacacaagtgtacctgtataacaaaccttcacatgtacccttgaacc-----taaaagtt--aaaaaaaaacttaatgagcgacaatgtacattatttgaggataattacattaaaagcccagacttcaccaccacacaaaatatccatgtaacaaaatttcact i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45852326 0 + 49145316 C a score=2740389.000000 s hg38.chr19_GL949747v2_alt 518838 966 + 729520 tgcgctccttaaatttatacaaataaacaaa-----AAAGTATAATAAAATAGTAGATTCTTTCTTTAGAGATGACAAATAGTGCCAGAGAAAATGCCTCCACACTCTGGCATTGAGATCATCTCCAGGATAA-GGGTATACTGCATGCCTGGTCAAGTC----CAAGTAAATATACTCAGACCATGAATCTCAGAGATGAAACATAGGTTCAGAACAGACAAAGCCACAGAGCTTTTGACTAATGGCCCAGTGAAGGCAATGTCTGCCTGTATGGTAT---CCACCACCTTATATTCTGTCCCAAGCCCGTCTATTTGGATGTAGCATCTGGTTCAAAGATGAATTTGAACACC-ATTAGACACTGGCTTAATGAAAATTCACTTCTCATTCATTTCTCATCTGAAACATAAATAGAAATACaggtcttaggcaggaggatttcttgatgccagaagttagagactaccctggccaacatagaaagaccccatctctattTAAAAAA-----------------------------------------------------------------------ATATACATATATATGTCTTCTCTTGGGCTCCACCCAAGAGCAACCTGGAACTAAGTTATTCGGCAACGAACTGTTCCACTTTGCTGTGAGGCAATAGATGTGGAAATTCCCTGACGAGGGGCTCTGTCCTCA----------TACTTCCTGCGGAGCTTATTGTCGTAAGAATATCTGTCATCCTGCTAATGTGCATTGAAAGGAGAGCAACGGGGCTGAGGCCGTGTCAGCACGATGGACCCCAAACAGACCACCCTCCTGTGTCTTGGTGAGTTTCAGAGTAAAAGTGGGTTAGAGGGGAAGATAGAGAAATCCCAAAATAATCAGGGTGTCTCTTAACAGTGTGACTAGGAGATTTTAGTGGCTGCCAAGGAGATTCTGATCTCCTTAGTGGAAAGGCCGTCTTTGTCAATGTATCTATAACTTTGTCTCTACCCAAGCCCAAGCTAGCTTGTGGGGCTCAAGGTTTAATATTTGTATT s panTro4.chr19 59795145 967 + 63644993 tgcgctccttaaatttatacaaataaacaaa-----AAAGTATAATAAAATAGTAGATTCTTTCTTTAGAGATGACAAATAGTGCCAGAGAAAATGCCTCCACATTCTGGCATTGAGATCATCTCCAGGATAA-GGGTATACTGCATGCCTGGTCAAGTC----CAAGTAAATATACTCAGACCACGAATCTCAGAGATGAAACATAGGTTCAGAACAGACAAAGCCACAGAGCTTTTGACTAATGGCCCAGTGAAGGCAATGTCTGCCTGTATGGTAT---CCACCACCTTATATTCTGTCCCAAGCCCGTCTATTTGGATGTAGCATCTGGTTCAAAGATGAATTTGAACACCGATTAGACACTGGCTTGACGAAAATTCACTTCTCATTCGTTTCTCATCTGAAACATAAATAGAAATATAGGTCTTaggcaggaggatttcttgaggccagaagttagagactaccctggccaacatagaaagaccccatctctatttaaaaaa-----------------------------------------------------------------------ATATACATATATATGTCTTCTCTTGGGCTCCACCCAAGAGCAACCTGGAACTAAGTTATTCGGCAACGAACTGTTCCACTTTGCTGTGAGGCAATAGATGTGGAAATTCCCTGACGAGGGGCTCTGTCCTCA----------TACTTCCTGTGGAGCTTATTGTCGTAAGAATATCTGTCATCCTGCTAATGTGCATTGAAAGGAGAGCAACGGGGCTGAGGCCGTGTCAGCACGATGGACCCCAAACAGACCACCCTCCTGTGTCTTGGTGAGTTTCAGAGTAAAAGTGGGTTAGAGGGGAAGATAGAGAAATCCCAAAATAATCAGGGTGTCTCTTAACAGTGTGACTAGGAGATTTTAGTGGCTGCCAAGGAGATTCTGATCTCCTTAGTGGAAAGGCCGTCTTTGTCAATGTATCTATAACTTTGTCTCTACCCAAGCCCAAGCTAGCTTGTGGGGCTCAAGGTTTAATATTTGTATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56705057 972 + 60714840 tgtgctccttaaatttatacaaattaa-aaa-----aAAGTATAATAAAATAGTACATTCTTTCTTTAGAGATGACAAATAGCACCAGAGAAAATGCCTCCACATTCTGGCATTGAGATCATCTGCAGGATAA-GGGTATACTGCATGCCTGGTCATGCCTGGTCAAGTAAATATACTCAGACCATGAATCTCAGAGACGAAACATAGGCTCAGAACAGACAAAGCCATAGAGCTTTTGACTAATGGCCCAGTGAAGACAATCTCTGCCTGTATGGTATCCACCACCACCTTATATTCTGTCCCAAACCCTTCCATTTGGATGTAGGATCTGATTCAAAGATGGATTTGAACACC-ATTAGACACCGGCTTGATGAAAATTCACTTCTCATTCGCTTCTCATCTGAAACATAAATAGAAATATAGGTCTTaggcaggaggatttcttgaggccagaagttagagactaccctggccaacatagaaagaccccatctctatttaaaaaa-----------------------------------------------------------------------atataCATATATATGTCTTCTCTTGGGCTCCACCCAAGAGCAACCTGGAACTAAGTTATTCGGGAACAAACTGTTCCACTTTGCTGTGAGGCAATAGATGTGGAAATTCCCTGACGAGGGGCTCTGTCCTCA----------TACTTCCTGTGGAGCTTATTGTCGTAAGAGTATCTGTCATCCTGCTAATGTGCATCAAAAAGAGACCAACGGGGCTGAGGCCGTGTCAGCACGATGGACCCCAAAGAGACCACCCTCCTGTGTCTTGGTGAGTTTCAGAGTAAAAGTGGGTTAGAGGGGAAGATAGAGAAATCCCAAAATAATCAGGGTGTCTCTTAACAGTGTGAGTAGGAGATTTTAGTGGCTGCCAAGGAGATTCTGATCTCCTTAGTGGAAAGTCTGTCTTTGTCAATATATCTATAACTTTGTCTCTGCCCAAGCCCAAGCTAGCTTGTGGGGCTCAAGGTTTAATATTTGTATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103255029 964 - 106955855 tgcgctccttaaatttatacaaattttttaa-----aaagtataataaaataGTAGATTCTTTCTTTAGAGATGACAAAAAGCGCCAGAGAAAATGCCTCCACATTCTGGCATTGAGATCATCTCCAGGATAA-GGGTGTACTGCATGCCTGGTCAAGCC----CAAGTAAATATACTCAGACCATGAATCTCAGAGATGAAACATAGGTTCCGAACAGACAAAGCCATAGAGCTTTTGACTAATGGCCCAGTGAAGACAATCTCTGCCTGTATGCTAT---CCACCACCTTATATTCTGTCCCAAGCCCTTCCATTTGGATGTAGGATCTGGTTTAAAGATGGATTTGAACACC-ATTAGACACTGGCTTGATGAAAATTCACTTCTCATTCGCTTCTCATTTGAAACATAAATAGAAATGTAGGTCTTaggaaggaggatttcttgaggccaaaagttagagactaccctggccaacatagcaagaccccatctctatttaaaaaa-----------------------------------------------------------------------aTATACATATATATGTCTTCTCTTGGGCTCCACCCAAGAGCAACCTGGAACTAAGTTATTAGGGAACGAACTGTTCCACTTTGCTGTGAGGCAATAGATGTGGAAATTCCCTGACGAGGGGCTCTGTCCTCA----------TACTTCCTGTGGAGCTTATTGTCGTAAGAGTATCTGTCATCCTACTAATGTGCATCAAAAGGAGACCAACGGGGCTGAGGCCGTGTCAGCACGATGGACCCCAAAGAGACCACCCTCCTGTGTCTTGGTGAGTTTCAGAGTAAAAGTGGGTTAGAGGGGAAGATAGGGAAATCCCAAAATAATCAGGGTGTCTCTTAACAGTGTGACTAGGAGATTTTAGTGGCTGCCAAGGAGATTCTGATCTCCTTAGTGGAAAGGCCGTCTTTGTCAATATATCTATAAC--TGTCTCTACCCAAGCCCAAGCTAGCCTGTGGGGCTCAAGGCTTAATATTTTTATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60537628 970 + 64156825 tgtgctccttaaatttatacaaataaaaaga-----ACAGTATAATAAAATAGTAGATTCTTTTTTTAGAGATGACAAAGAGTGCCAGAGAAAATGCCTCCACATTCTGGCATTGAGATCATCCCCAGGGTAAGGGGTATACTGCATGCCTGATCAAGCC----CAAGTAAATATACTCAGACCATGAATCCCAGAGATGAAACATAGGTTCAGAACAGACAAAGCCACAGAGCTTCTGACTGATGGCCCAGTGAAGACAGTCTCTGCCTGAATGGTGT---CCACCACCTTATAGTCTGTCCCAAGCCCTTCCATTTGGATGTAGGATCTGGTTCAATGATGGATTTGAACACC-ATTAGACACTGGCTTGATGAAAATTCACTTCTCATTCACTTCTCATCTGAAACATACATAGAAATATAGGTCTTCAGAAggaggatttcttgaggccaggagttagagagtaccctggccaacatagcaagaccccatctctattaa------------------------------------------------------------------------------atatataTATATGTCTTCTCTTGGGCTCCACCCAAGAGCAACCTGAAACTAAGTTCTTCAGGAACAAACTGTTCCACTTTGCTGTGAGGCAACAGATGTGGAAATTCGCTGACCAGGGGCTCAGTCCTCATACTTCCTCATACTTCCTGTGGAGCTTATTGTCATAAGAGTATCTGCCATCCTGCTAATGTGAATCAAAAGGAGGCCAACAGGGCTGAGGCCGTGTCAGCGTGATGGACCCCAAAGAGACCACCCTCCTGTGTCTCGGTGAGTTTCAGAGTAAAAGTGGGTTAGAGGGGAAAACAGGGAAATCCCAAAATAATCCGGGTGTCTCTTGACTGTATGACTAGGAGATTTTCGTGGCTGCCAAGGAGATTCTGACCTCCTTAGTGGAAAGGCAGTCTTTATCAATATGTCTATAACTTTGTCTCTGCCCAAGTCCGACCTAGCTTGTGGGACTCAAGGGTTAATATTTTTATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55660713 980 + 59248254 tgtgctccttaaatttatacaaataaaaaga-----ACAGTATAATAAAATAGTAGATTCTTTTTTTAGAGATGACAAAGAGTGCCAGAGAAAATGCCTCCACATTCTGGCATTGAGATCATCCCCAGGGTAAGGGGTATACTGCATGCCTGATCAAGCC----CAAGTAAATATACTCAGACCATGAATCCCAGAGATGAAACATAGGTTCAGAACAGACAAAGCCACAGAGCTTCTGACTGATGGCCCAGTGAAGACAATCTCTGCCTGAATGGTGT---CCACCACCTTATATTCTGTCCCAAGCCCTTCCATTTGGATGTAGGATCTGGTTCAAAGATGGATTTGAACACC-GTTAGACACTGGCTTGATGAAAATTCACTTCTCATTCACTTCTCATCTGAAACATACATAGAAATATAGGTCTTCAGAAggaggatttcttgaggccaggagttagagagtaccctggccaacatagcaagaccccatctctattaaaaata--------------------------------------------------------------------taTATATATATATATATGTCTTCTCTTGGGCTCCACCCAAGAGCAACCTGAAACTAAGTTCTTCAGGAACAAACTGTTCCACTTTGCTGTGAGGCAACAGATGTGGAAATTCACTGACCAGGGGCTCTGTCCTCATACTTCCTCATACTTCCTGTGGAGCTTATTGTCATAAGAGTATCTGCCATCCTGCTAATGTGAATCAAAAGGAGGCCAACAGGGCTGAGGCCGTGTCAGCGTGATGGACCCCAAAGAGACCACCCTCCTGTGTCTCGGTGAGTTTCAGAGTAAAAGTGGGTTAGAGGGGAAAACAGGGAAATCCCAAAATAATCCGGGTGTCTCTTGACAGTATGACTAGGAGATTTTCGTGGCTGCCAAGGAGATTCTGACCTCCTTAGTGGAAAGGCAGTCTTTATCAATATGTCTATAACTTTGTCTCTGCCCAAGTCCGACCTAGCTTGTGGGACTCAAGGGTTAATATTTTTATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47778285 980 + 51301725 TGTGctccttaaatttatacaaataaaaaga-----acagtatAATAAAATAGTAGA-TCTTTCTTTAGAGATGACAAGGAGTGCCAGAGAAAATGCCTCCACATTCTGGCATTGAGATCATCCCCAGGGTAA-GGGTACACTGTATGCCTGATCAAGCC----CAAGTAAATATACTCAGACCATGAATCCCAGAGATGAAACATAGGTTCAGAACAGACAAAGCCACGGAGCTTCTGACTGATGGCCCAGTGAAGACAATCTCTGCCTGAATGGTGT---CCACCACCTTATATTCTGTCCCAAGCCCTTCCATTTGGATGTAGGATCTGGTTCAAAGATGGATTTGAACACC-GTTAGACACTGGCTTGATGAAAATTCACTTCTCATTCACTTCTCATCTGAAACATACAGAGAAATATAGGTCTtcggcaggaggatttcttgaggccaggagttagagagtatcctggccaacatagcaagaccccatctctattaaaaaaaat------------------------------------------------------------------aataattttatatatatgcctTCTCTTGGGCTCCACCCAAGAGCAACCTGGAACTAAGTTCTTCAGGAACAAACTGTTCCACTTTGCTGTGAGGCAACAGATGTGGAAATTCGCTGACCAGGGGCTCTGTCCTCATACTTCCTCATACTTCCTGTGGAGCTTATGGTCATAAGAGTATCTGTCATCCTGCTAATGTAAATCAAAAGGAGGCCAACAGGGCTGAGGCCGTGTCAGCGTGATGGACCCCAAAGAGACCACCCTCCTGTGTCTCGGTGAGTTTCAGAGTAAAAGTGGGTTAGAGGGGAAAATAGGGAAATCCTAAAATAATCCAGGTGTCTCTTGACAGTATGACTAGGAGATTTTCGTGGCTGCCAAGGAGATTCTGACCTCCTTAGTGGAAAGGCAGTCTTTATCAATATGTCTATAACTTTGTCTCTGCCCAAGTCCGACCTAGCTTGTGGGACTCAagggttaatatttttatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47497801 979 + 50890351 tgtgctccttaaatttatacaaataaaaaga-----ACAGTATAATAAAATAGTAGATTATTTCTTTAGAGATGACAAATAGCGCCAGAGAAAATGCCTCCACATTCTGGCATTGAGATCATCCCCAGCGTAA-GGGTATACTGTATGCCCGATCAAGCC----CAAGTAAATATACTCAGAACATGAATCCCAGAGATGAAACATAGGTTCAGAACAGACAAAGCCACAGAGCTTCTGACTGATGGCCCAGTGAAGACAATCTCTGCCTGAATGGTCT---CCACCACCTTATATTCTGTCCCAAGCCCTTCCATTTGGATGTAGGATCTGGTTCAAAGATGGATTTGAACACC-ATTAGACACTGGCTTGATGAAAATTCACTTCTCATTCACTTCTCATCTGAAACATACATAGAAATATaggtcttcggcaggaggatttcctgaggccaggagttagagagtaccctggccaacatagcaagaccccatctctATTAAAAAAA--------------------------------------------------------------------AATATATATATATATATGTCTTCTCTTGAGCTCCACCCAAGAGCAACCTGGAACTAAGTTCTTCAGGAACAAACTGTTCCACTTTGCTGTGAGGCAACAGATGTGGAAATTCGCTGACCAGGGGCTCTGTCCTCATACTTCCTCGTACTTCCTGTGGAGCTTATTGTCATAAGAGTATCTGTCATCCTGCTAATGTGAATCAAAAGGAGGCCAACAGGGCTGAGGCCGTGTCAGCGTGATGGACCCCAAAGAGACCACCCTCCTGTGTCTTGGTGAGTTTCAGAGTAAAAGTGGGTTAAAGGGGAAAATAGGGAAATCCCAAAATAATCCAGGTGTCTCTTGACAGTATGACTAGGAGATTTTAGTGGCTGCCGAGGAGATTCTGACCTCCTTAGTGGAAAGGTAGTCTTTATCAATATGTCTATAACTTTGTCTCTGCCCAAGTCCGAGCTAGCTTGTGGGACTCAAGGGTTAATATTTTTATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45852326 1016 + 49145316 tgggcTCCTTACATTTATACACATTAAAAAAAACACACAGTAAAATAAATTGGTACATTCTTTCTTTAGAGATGACAAATAGCACCATAGAAAATGCCTCCACGTTC-GGCATTAAGATAATCTCTAGGGTAA-GGGTATACTGCATGCCTGATCAAGCC----CAGGAAAATATACTCTGACTGTGAATCCCAGAGATCAAACATTAGCTCAGAATAGACAAAGCCACAGAGCTTTTGAGAGATGGCCCAGTGGAGACCGTCTCTGCCTGTA--ATGC---CATCCACCTTACATGCTGTCCCAGGCCCTTCCGTTTGGATGTAGGAAAGGGTTCAGAGATGGATTGGAATACC-ATTAGACACTGGCTTGAGGAAAATTCAC-----------TTCTCATCAGAAACATAAATAGAAATATAGGTCTCaggcaggaggatttcttgaggccaggagctagagactatcctggccaacatagcaaggccccatctctatttaaaaaaagaaagaaaaagaaaagaagaaagaaagagaaaaagaaagaagaaagaacgagaaagaaagagaaaaagaaagaaagaaagaTAGGTCTTCTCTTATGCTCCACCCAAGAAGAACCCGGAAGTAAGTTCTTTGGGAATGAACTGTTCCTCTTCTCTGTGAGGCAACAGATGTAGAAATTCTCTGATG-GGGGCTCTGTCCTCA----------TACTTCCTGAGAAGCTTATACTTAT--GAGTGTCAGTCATCCTGCTAATGTGCATTCAAAGGAGGCCAACGGGGCTGAGGCTGTGTCAGCATCATGGCCCCCAAAGAGACCACCCTCCTCTGTCTTGGTGAGTTTCAGAGT-AAAGTGGGTTAGAGGGGAAGATGGGGGAATCCCAAAATAACCAGGGTGTCTCTTAACAGTATGACTAGGAGATTTTAATGGCTGCGAAGGAGAGTCTGATCTCCTTAGTAGAAGGGCAGTCTTTGCCAATATATCTATAATTTTGTCTCTGCCCAAGTCCGAACTAGGTTGCGGGG--------GTGTTATTTTTGTT i calJac3.chr22 C 0 I 321 a score=1004195.000000 s hg38.chr19_GL949747v2_alt 519804 336 + 729520 AAACCTATAGTGTGTTATCTGGGATTCATGATGGTCCCAAGGTTCTTATCAAGGAGAGACTTAGAGGCTGGAATCTGAAAGGTAAAAATAAAGAATGAACCTCAAAACTGTGATTGTTGTGGAAGGAAAACATATGATAGAACCCCATATAGAaatatggttactagtatttt-gttgaagatttttgcatttatgttcaacaaagatattatccagaagttttctgtttttgttgtatctctgccacattttgttatcaggataatgttggcctcatagaatgagttggggaggagtccctcctccaggatttttttcaatagtttcagtaggaat s panTro4.chr19 59796112 337 + 63644993 AAACCTATAGTGTGTTATCTGGGATTCATGATGGTCCCAAGGTTCTTATCAAGGAGAGACTTAGAGGCTGGAATCTGAAAGGTAAAAATAAAGAATGAACCTCAAAACTGTGATTGTTGTGGAAGGAAAACATATGATAGAAACCCATATAGAAATATGGttactagtatttttgttgaagatttttgcatttatgttcaacaaagatattatcccgaagttttctgtttttgttgtatctctgccacattttgttatcaggatgatgttggcctcatagaatgagttggggaggaatcgcttctcctggatttttttcaatagtttcagttggaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56706029 335 + 60714840 AAACCTATAGTGTGTTATCTGGGATTCACGATGGTTCCAAGGTTCCTATCAAGGAGAGACTTAGAGGCTGGAATCTGAAAGGTAAAAATAAAGAATGAGCCTCAAAACTGTGATTGTTGTGGAAGGAAAACATGTGATTGAATCCCATATAGAAATATGGttactagtatttt-gttgaagatttttgcatttatgttcaacaaagatattatcccaaagttttctgttttcgttgtgtctctgctacgttttgttatcaggatgatgctggcctcatagaatgagttggggaggagtccctcctcctgga-ttttttcaatagttttagtaggaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103255993 334 - 106955855 AAACCTATCGTGTGTTATCTGGGATTCACGATGGTTCCAAGGTTCCTATCAAGGAGAGACTTAGAGGCTGGCATCTGAAAGGTAAAAATAAAGAATGAGCCTCAAAACTGGGATTGTTATGGAAGGAAAACA--TGATTGAACCCCATATAGAAATATGGttactagtatttt-gttgaagatttttgcatttatgttcaacaaagatattatcccgaagttttctgtttttgttgtatctctgccacattttgttatcaggatgatgttggcctcatagaatgagttggggaggagtccctcctcctggatttttttcaatagtttcagtaggaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60538598 335 + 64156825 AAACCTATAGTGTGTTATCTGGGATTAATGATGGTTCCAAGGTTCCCATCAAAGACAGACTTAGGGGCTGGAATCTGAAAGGTAAAAATAAAGAATGAGCCTCAAAACTGTGATTGTTGTGGAAGGAAAAAATATGATTGAACCCCATATAGAAATATGGttactagtatttt-gttgaagatttttgcatttatgttcaacaaagacgttatcccgaagttttctggttttgttgcgtctctgccacgttttgttatcaggatgatgctggcctcatagaatgagttggggaggagtccctcctcctgga-ttttttcaatagtttcagtaggaat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55661693 335 + 59248254 AAACCTATAGTGTGTTATCTGGGATTAATGATGGTTCCAAGGTTCCCATCAAAGAGAGACTTAGGGGCTGGAATCTGAAAGGTAAAAATAAAGAATGAGCCTCAAAACTGTGATTGTTGTGGAATGAAAAAATATGATTGAACCCCATATAGAAATATGGttactagtatttt-gttgaagatttttgcatttatgttcaacaaagacgttatcccgaagttttctggttttgttgcgtctctgccacgttttgttatcaggatgatgctggcctcatagaatgagttggggaggagtccctcctcctgga-ttttttcaatagtttcagtaggaat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47779265 335 + 51301725 aaacctAGAGTGTGTTATCTGGGATTAATGATGGTTCCAAGGTTCCCATCAAAGAGAGACTTAGAGGCTGGAATctgaaaggtaaaaataaagaatgagccTCAAAACTGTGATTGTTGTGGAAGGAAAAAATATGATTGAACCCCATATAGAAATATggttactagtatttt-gttgaagatttttgcatttatgttcaacAAAGACGTTATCCCGaagttttctggttttgttgcgtctctgccacgttttgttatcaggatgatgctggcctcatagaatgagttggggaggagccCCTCCTCCTGGA-TTTTTtcaatagtttcagtaggaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47498780 335 + 50890351 AAACCTATAGTGTGTTATCTGGGATTAATGATGGTTCCAAGGTTCCCATCAAAGGGAGACTTAGAGGCTGGAATCTGAAAGGTAAAAATAAAGAATGAGCCTCAAAACTGCGATTGTTGTGGAAGGAAAAAATATGATTGAACCCCATATAGaaatatggttactagtatttt-gttgaagatttttgcatttatgttcaacaaagacattatcccgaagttttctggttttgttgtgtctctgccacgttttgttatcaggatgatgctggcctcatagaatgagttggggaggagtccctcctcctgga-tttttccaatagtttcagtaggaat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45853663 335 + 49145316 aaaCCTATGGTGTGTTGTCTGGGATTCATGATGGTTGCAGGGTTGCTATCAAGGAGAGACCTAGAGGCTGGAATCTAAAAGGGAAAAATAAAGAATAAGCCTCAAAACAGTGATTGCTGTAGAAGGGAAAAATATGATCGAACCCCATGTAGTAATATGGttactagtatttc-gttgaaga-ttttgcatttatgttcaacaaagatactgccccagagttttctgtttttcttgtgtctctgccatgttttgttatcaggatgacgctggcctcgtaaaatgagttggggaggggtccctccgcctggatttttttgaatagtttcagtaggaat i calJac3.chr22 I 321 C 0 a score=692889.000000 s hg38.chr19_GL949747v2_alt 520140 311 + 729520 aatactagctcttcttggccgggcgcagtggctcacacctgcaatcccagcactttgggaggccaaggcaggcggatcacaaggtcaggagatcaaaaccatcctggccaacatggtgaaaccctgtctctactaaaaatac-aaaaaaa-ttagccaggcgtggtggcgggcgcctgtagtcccagctactcgtgcggctgaggcaggagaatggcatgaacctgggaggcagagcttgcagtgagccaagatcatgccactgcactccagcttgggcgacacagcgagactctgtgtc--------------aaaaaaaaaaaaa s panTro4.chr19 59796449 312 + 63644993 aatactagctcttcttggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcaaaaccatcctggccaacatggtgaaaccccgtctctactaaaaatac-aaaaaaaattagccaggcgtggtggtgagcacctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaacctgggaggcggagcttgcagtgagccgagatcgtgccactgcactccagcttgggcgacacagcgagactccgcctc--------------aaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56706364 311 + 60714840 aatactagctcttcttggcctggctcagtggttcacgcctgtaatcccagcactttgggaggccgaggtgggcggatcacaaggtcaggagatcaaaaccatcctggccaacatggtgaaaccctgtctctactacaaatac-aaaaaaa-ttagccgggcgtggtggtgggtgcctgtagtcccagctactcaggaggctgaggcaagagaatggcgtgaacccaggaggcggagcttgcagtgagcggagatcatgtcactgcactccagcctggccgacagagcgagactctgtctc--------------aaaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103256327 311 - 106955855 attactagctcttcttggccaggtgcagtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcatgaggccaggagatcaaaaccatcctggctaacacggtgaaacactgtctctactaaaaatac-aaaaaaa-ttagccaggtgtggtggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaatggcatgaacctgggaggtggagcttgcagtgagccaagatcatgccactgctctccaggctgagcaacagagcgagactctgtctc--------------aaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60538933 307 + 64156825 aatactagttcttcttggccaggtgcagtggctcacgcctataatcccagcactttgggaggccaaggcaggtggaacacacggtcaggagatca----catcctgcctaacacagtgaaaccccgtctctactaaaaatac-aaaaaaa-ttagccagatgtggtggcgggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaacctgggaggcagagcttgcagtgagctgagatcgcaccactgcacttcagcctgggcgacagagcgagactctgtctc--------------aaaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55662028 308 + 59248254 aatactagttcttcttggccaggtgcagtggctcacgcctataatcccagcactttgggaggccaaggcaggtggaacacacggtcaggagatca----catcctgcctaacacagtgaaaccccgtctctactaaaaatac-aaaaaaa-ttagccagatgtggtggcgggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaacctgggaggcagagcttgcagtgagctgagatcgcaccactgcacttcagcctgggcgacagagcgagactctgtctc-------------aaaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47779600 320 + 51301725 aaTACTAGttcttcttggccaggtgcggaggctcacgcctgtaatcccagcactttgggaggccaaggcaggcggaacACACGGTCAGGAACAca----catcctgcctaacacggtgaaaccctgtctctactaaaaatac--aaaaaa-ttagccaggtgtggtggtgggcacctgtagtcccagctactcgagaggctgaggcaggagaatgacatgaacctgggaggcagagcttgcagtgagccgagatcgcaccactgcacttcagcctgggcgacagagcgagactctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47499115 308 + 50890351 aatactagttcttcttggccaggcacggtggctcacacctgtaatcccagcactttgggaggccaaggcgggaggaacacacggtcaggagatca----catcctgcctaacacggtgaaaccctgtctctactaaaaatacaaaaaaaa-ttagccaggtgtggtggcgggcacctgtagtcccagctacttgggaggctgaggcaggagaatggcatgaacctgggaggcagagcttgcagtgagccgagatcgcaccactgcacttcagcctgggcaacagagcgagactctgcctc--------------aaaaaaaaaaaaa i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45853998 0 + 49145316 C a score=1519855.000000 s hg38.chr19_GL949747v2_alt 520451 529 + 729520 aa------tgccagctcttctttatatatctggtgggattgagctgtgaatccatctggtactggtctttTTCTGGTCTGTCATTACAGAGGGTGATTTGTCGTAAAGGTTGGAAATGGAAGCTTGATTTTTCATAAATCTCTCTCTTCCAGTGCTCTGTCTGGGCCAGAGGATTCAGGCACAGGAAGGTAAGTGTCCTGTAAATCTCTCCCAGCCCCTTTAGACCCTCTTGGGAGCTCTAGGATAAAGAAATTGAGGAATAGCCTGAAGCACC-----ATTCTTATTTTAGTCCCCATTCTAGTTGTTTCTGCTGTGCTTCTCTTGCATAATTTCTATCTCACTTTGTTATCTCCAAACCCTTCAGACTCATTAATGCTCAGGCCTGGATTTATAGTTAGTCCTTGCCTGTGTTAGACTGTCCATGAAGGATCTGTAATTTACTGAATGCTC-AAACTGCAAGAATGAGGAAGTCAGGAGTCATCTGCCCAATATCCTTCCTTATGCTGATTCTATTTTGTTTTAGCAACCCACTTCCTC s panTro4.chr19 59796761 530 + 63644993 aa-----atgctagctcttcttcatatatctggtgggattgagctgtgaatccatctggtactggtctttttctggtCTGTCATTACAGAGAGTGATTTGTCATAAAGGTTGGAAATGGAAGCTTGATTTTTCATAAATCTCTCTCTTCCAGTGCTCTGTCTGGGCCAGAGGATTCAGGCACAGGAAGGTAAGTGTCCTGTAAATCTCTCCCAGCCCCTTTAGACCCTCTTGGGAGCTCTAGCATAAAGAAATTGAGGAATAGCCTGAAGCACC-----ATTCTTATTTTAGTCCCCATTCTAGTTGTTTCTGCTGTGCTTCTCTTGCATAATTTCTATCTCACTTTGTTATCTCCAAACCCTTCAGACTCATTAATGCTCAGGCCTGGATTTATAGTTAGTCCTTGCCTGTGTTAGACTGTCCATGAAGGATCTGTAATTTACTGAACGCTC-AAACTGCAAGAATGAGGAAGTCAGGAGTCATCTGCCCAATATCCTTCCTTATGCTGATTCTATTTTGTTTTAGCAACCCACTTCCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56706675 528 + 60714840 a-------tactagctcttcttcatatatctggtgggattgagctgtgaatccacctggtactggtctttttctggtCTGTCATTACGGATGGTGATTTGTCATAAAGGTTGGAAATGGAAGTTTGATTTTTCATAAATCTCTCTCTTCCAGTGCTCTGTCTGGGCCAGAGGATTCAGGCACAGGAAGGTAAGTGTCCTGTAAATCTCTCCCAGCCCCTTTAGACCCTCTTGGAAGCTCTAGGATAAAGAAATTGAGGAATAGCCTGAAGCACA----GATTCTTATTTTAGT-CCCATTCTAGTTGTTTCTGCTGTGCTTCTCTTGCCTAATTTCTATCTCACTTTGTTATCTCCAAATGCTTCAGACTCATTAATGCTCACGCCTGGATTTATAGTTAGTCCTTTCCTGTGTTAGACTGTCCATGAAGGATCTGTAATTTACTGAATGCTC-AAACTGCAAGGATGAGGAAGTCAGGAGTCATCTGCCCAATATCCTTCCTTATGCTGATTCTATTTTGTTTTAGCAACCCACTTCCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103256638 536 - 106955855 aaaaaaaatactagctcttctttttatatctggtgggattgagctgtgaatccatctggtactggtctttttctggtCTGTCATTACAGAGGGTGATTTGTCATAAAGGTTGGAAATGGAAGCTTGATTTTTCATAAATCTCTCTCTTCCAGTGCTCTGTTTGGGCCAGAGGATTCAGGCACAGGAAGGTAAGTGTCCTGTAAATCTCTCCCAGCCCCTTTAGACCCTCTTAGAAGCTCTAGGATAAAGAAATTGAGGAATAGCCTGAAACACA----GATTGTTATTTTAGTCCCCATTCTAGCTGTTTCTGCTGTGCTTCTCTTGCATAATTTCTAGCTCACTTTGTTATCTCCAAACCCTTCAGACTCATTAACACTCAGGCCTGGATTTATAGTTAGTCCTTGCCTGTGTTAGACTGTCCATGAAGGATCTGTAATTTACTGAATGCTCAAAACTGCAAGAATAAGGAAGTCAGGAGTCATCTGCCCAACATCTTTCCTTATGCTGATTCTATTTTGTTTTAGCAA-CTACTTCCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60539240 522 + 64156825 aa-----atactagctcttctttatatatctagtgggactgagctgtgtctccatctggtactggtcttttcctggtCTATCGTTACAGAGGGTGATTTGTCATAAAGATTGGAAATGGAAGCTTGATTTTTCATAAATCTCTCTCTTCCAGTGCTCTGTCTGGGCCAGAGGATTCAGGCACAGGAAGGTAAGTGTCCTGTAAATCTCTCCCAGCCCCTTTAGACTCTCTTGGAAGCTC-AGGATAAAGAAATTGAGGAATAGCCTGAAGTACA----GATTCTTATTTTAGTCCCCATTCCAGTTGTTTCTGCTGTGCTTCTCTTGCATAATTTCTATCACACTTTGTTATAGCCAAATCCTTCAGACTCATTAATGCTCAGGCCTGGATTTATAGTTAGTCCTTGCCTGTGTTAGACTGCCCATGAAGGATCTGTAATCTACTGAATGCTCAAAACTGCAAGAATGAGGAAATCAGGAGTCATTTGCCCAACATCCTTCCTTATGC---------TTTGTTTTAGCAACCTACTTCCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55662336 522 + 59248254 aa-----atactagctcttctttatatatctagtgggactgagctgtgtctccatctggtactggtcttttcctggtCTATCATTACAGAGGGTGATTTGTCATAAAGATTGGAAATGGAAGCTTGATTTTTCATAAATCTCTCTCTTCCAGTGCTCTGTCTGGGCCAGAGGATTCAGGCACAGGAAGGTAAGTGTCCTGTAAATCTCTCCCAGCCCCTTTAGACTCTCTTGGAAGCTC-AGGATAAAGAAATTGAGGAATAGCCTGAAGTACA----GATTCTTATTTTAGTCCCCATTCCAGTTGTTTCTGCTGTGCTTCTCTTGCATAATTTCTATCACACTTTGTTATAGCCAAATCCTTCAGACTCATTAATGCTCAGGCCTGGATTTATAGTTAGTCCTTGCCTGTGTTAGACTGCCCATGAAGGATCTGTAATCTACTGAATGCTCAAAACTGCAAGAATGAGGAAATCAGGAGTCATTTGCCCAACATCCTTCCTTATGC---------TTTGTTTTAGCAACCTACTTCCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47779920 522 + 51301725 aa-----atactagctctTCTTTATGTATCTGGTGGGACTGAGCTGTGTCTCCATCTGGTACTGGTCTTTTCCTGGTCTATCATTACAGAGGGTGATTTGTCATAAAGGTTGGAAATGGAAGCTTGATTTTTCATAAATCTCTCTCTTCCAGTGCTCTGTCTGGGCCAGAGGATTCAGGCACAGGAAGGTAAGTGTCCTGTAAATCTCTCCCAGCCCCTTTAGACCCTCTTGGAAGCTC-AggataaagaaattgaggaatAGCCTGAAGCACA----GATTCTTATTTTAGTCCCCATTCTAGTTGTTTCTGCTGTGTTTCTCTTGCATAATTTCTATCACACTTTGTTATAGCCAAATCCTTCAGACTCATTAATGCTCAGGCCTGGATTTATAGTTAGTCCTTGCCTGTGTTAGACTGCCCATGAAGGATCTGTAATCTACTGAATGCTCAAAACTGCAAGAATGAGGAAGTCAGGAGTCATTTGCCCAACATCCTTCCTTATGC---------TTTGTTTTAGCAACCTACTTCCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47499423 521 + 50890351 aa-----atactagctcttctttatatatctggtgggactgagctgtgtctccatctggtactggtcttTTCCTGGTCTATCATTACAGAGGGTGATTTGTCATTAAGGTTGGAAAGGGAAGCTTGATTTTTCATAAATCTCTCTCTTCCAGTGCTCTGTCTGGGCCAGAGGATTCAGGCACAGGAAGGTAAGTGTCCTGTAAATCTCTCCCAGCCCCTTTAGATCCTCTTGGAAGCTCTAGGATAAAGAAATTGAGGAAGAGCCTGAGGCACA----GAGTCTTATTTTAGTCCCCATTCTAGTTGTTTCTGCTGTGCTTCTCTTGCATAATTTCTATCACACTTTGTTATAGCCAAATCCTCCGGACTCATTAATGCTCAGGCCTGGATTTATAGTTAGTCCCTGCCTGTGTTAGACTGCCCAGGAAGGATCTGTAACCTACTGAATGCTCAAAACTGCAAG-ATGAGGAAGTCAGGAGTCATTTGACCAACATCTTTCCTTATGC---------TTTG-TTTAGCAACCTACTTCCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45853998 533 + 49145316 ------aatgccagctcttctttatatatctggcgggattcagctgtgactccatctggtactgggctttttctggtCTGTCATTACGGAGGGCGACTTGTCATAAAGGTTGGAAACGGAAGCTTGATTTTTCATCAATCTCTCTCTTCCAGTGCTCTGTCTGGGCCAGAGGATTCAGGCACAGGAAGGTAAGTGTCCGGTGACTCTCTCCCAG-CCCTTTAGACCCCCTTGGAAACTCTAGGATGAAGCAATTGAGGAAGAGCCTGAAGCACAGAGAGATTCCTGTTTTAGTCCCCGTTCCGGTTGTTTCTGCTGGGCTTCCCTTG-ATTCGTTCCATCTCACTCCGTTATCTCTAGTCCCTTCAGACGCACTCATGCTCGGGCCTGGATTTATAGTGAGTCCCTGCCTCTGTTAGACTGCGCGTGAGGGACCTGTAACCAGCTGATTGCTCCCCACCGCAAGAGTGAGGAAGTCAGGAGTCCTTTGCCCAACATCCTTCCTTACACTGATTCTATTTTATTGTAGCAACTTACTTCCTC i calJac3.chr22 C 0 I 326 a score=2800.000000 s hg38.chr19_GL949747v2_alt 520980 1 + 729520 C s panTro4.chr19 59797291 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56707203 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103257174 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60539762 1 + 64156825 C i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55662858 1 + 59248254 C i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47780442 1 + 51301725 C i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47499944 1 + 50890351 C i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45854531 326 + 49145316 I a score=1515916.000000 s hg38.chr19_GL949747v2_alt 520981 520 + 729520 CGTCACTTCATTTAAAAGGATGCTGCCATAGTCTAACCCTACTGAACACTCTAGCATTCTGTAGTACTACTGCAGTACTAAGCATGAGGCAGTCTTAGTGTACTACTGAATATTCTGCCACCCCAACTACTACTGCCTTAGCCTCCTAATGGGTGTGAGCCCCACGTCCATCCATGTCTTCTCTCTTCCAGCTCCTTCTAAAG-------CCTGAATTATttgtgtgttgaacaatactcattcttcctatccatgagcatggaatgtttttccatttgtttgtgtcatctatgatttctttgaccagtgttttgtagttctccttgcagagatctttcacctccctggttagctgtattcccaggtattttattctttttgcagtaattgtgaatggattctattcttgatttggctctcagcttagatgtttttggtgtataggaatgctactgatttttatatattgattttgtatcctggaactttgctaaagttgtttatcagattaagaagtgt--ttgggca s panTro4.chr19 59797292 520 + 63644993 CGTCACTTCATTTAAAAGGATGCTGCCATAGTCTAAGCCTACTGAACACTCTAGCATTCTGTAGTACTACTGCAGTACTAAGCATGAGGCAGTCTTAGTGTACTACTGAATATTCTGCCACCCCAACTACTACTGCCTTAGCCTCCTAATGGGTGTGAGCCCCACGTCCATCCATGTCTTCTCTCTTCCAGCTCCTTCTAAAG-------CCTGAATTATTTGTGTGttgaacaatattcattcttcctatccatgagcatggaatgtttttccatttgtttgtgtcatctatgatttctttgaccagtgttttgtagttctccttgcagagatctttcacctccctggttagctgtattcccaggtattttattctttttgcagtaattgtgaatggattctattcttgatttggctctcaacttagatgtttttggtgtatagaaatgctactgatttttattaattgattttgtatcctggaactttgctaaagttgtttatcagattaagaagtgt--ttgggca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56707204 520 + 60714840 CATCACTTCATTTAAAAGGATGCTGCCATAGTCTAACCCTACTGAACACTCTAGCGTTCTATAGTACTACTGCAGTACTAAGCATTAAGTAGTCTTAATGTACTACTGAATATTCTGCCACCCCAACTACTACTGCCTGAGCCTCCTAACAAGTGTGAGCCCCATGTCCATCCATGTCTTCTCTCTTCCAGCTCCTTCTAAAG-------CCTGAATTATTTGTGTGttgaacaatattcattcttcctatccatgagcatggaatgtttttccatttgtttgtgtcatctatgatttctttgagcagtgttttgtagttctccttgcagagatctttcacctccctggttagctgtattcccaggtattttattctttttgtggtaattgtgaatggattctcttcttgatttggctctcagcttagatgtttttggtgtataggaatgctactgttttttgtatattgattttgtatcctggaactttgccaaagttgtttatcagattaagaagtgt--ttgggca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103257175 520 - 106955855 CGTCACTTCATTTTAAAGGACGCTGCCATAGTCTAACTCTACTGAACACTCTAGCATTCTATAGTACTACTGCAGTACTAAGCACGAAGTAGTCTTAGTGTACTACTGAATATTCTGCCACCCCAACTACTACTGCCTTAGCCTCCTAGTGGGTGTGAGCCCCATATCCATCCATGTCTTCTCTCTTCCAGCTCCTTCTAATG-------CCGGAATTATTTGTGTGttgaacaatattcattcttcctatccatgagcatggaatgtctttccatttgtttgtgtcgtctgtgatttctttgagcagtgttttgtagttatccttgcagagatctttcacctccctggttagctgtattcccaggtactttattctttttgtgataattgtgaatggattctgttcttgatttggctctcagcttagatgtttttggtgtacaggaatgctactgatttttgtatattgattttgcatcctggaactttgccaaagttgtttatcagattaagaagtat--ttgggca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60539763 520 + 64156825 TGTCACTTCATTTAAAGGGATACTGCCATAGTCTAATCCTACTGAACATTCTACTATTCTATAGTACTACTGCAGTACTAAGCATGCAGTAGTCTTAGAGTACTACTGAATATTCTGCCACCCCAACTACTACTGCCTTAGCCTCCTAATGGGTGTAAGCCCCATGTCCATCCATGTCTGCTCTCTTCCAGCTCCTTCTATAG-------CCTGAATTATTTGTGTGttgaacaatattcattcttcctatccatgagcatggaatgtttttccatctgtttgtgtcatctatgatttctttgagcagcgttttgtagttctccttgcagatatcttccacctccctggttagctgtattcctaggtattttattctttttgtggtaattgtgaatggattctgttcttgatttggctcttagctgagacgtttttggtgcataggaatgctactgatttttgtatattgattttgtgtcctggaactttgtcagagtcgtttatcagattaagaagtgt--ttgggca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55662859 520 + 59248254 TGTCACTTCATTTAAAGGGATACTGCCATAGTCTAATCCTACTGAACATTCTACTATTCTATAGTACTACTGCAGTACTAAGCATGCAGTAGTCTTAGAGTACTACTGAATATTCTGCCACCCCAACTACTACTGCCTTAGCCTCCTAATGGGTGTAAGCCCCATGTCCATCCATGTCTGCTCTCTTCCAGCTCCTTCTATAG-------CCTGAATTATTTGTGTGttgaacaatattcattcttcctatccatgagcatggaatgtttttccatctgtttgtgtcatctatgatttctttgagcagcgttttgtagttctccttgcagatatcttccacctccctggttagctgtattcctaggtattttattctttttgtggtaattgtgaatggattctgttcttgatttggctcttagctgagacgtttttggtgcataggaatgctactgatttttgtatattgattttgtgtcctggaactttgtcagagtcgtttatcagattaagaagtgt--ttgggca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47780443 520 + 51301725 TGTCACTTCATTTAAAGGGATGCTGCCATAGTCTAACCCTACTGAACATTCTAGTATTCTATAGCACTACTGCAGTACTAAGCATGCAGTAGTCTTAGAGTACTACTGAATATTCTGCCACCCCAACTactactgccttagcctcctaatgGGTGTAAGCCCCATGTCCATCCATGTCTGCTCTCTTCCAGCTCCTTCTATAG-------CCTGAATTATTTGTGTGTTgaacaatattcattcttcctatccatgagcatggaatgtttttccatctgtttgtgtcatctatgatttctttgagcagcgtTTTGTGGTTCTCCTTGCAGATatcttccacctccctggttagctgtattcctaggtattttattctttttgtggtaattgtgaatggattctgttcttgatttggctcttagcTGAGATGTTTTTGGTgcataggaatgctactgatttttgtgtattgattttgtatcctggaactttgtCAAAGTTGTTTATGAGATTAAGAAGTGT--TTGGGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47499945 513 + 50890351 TGTCCCTTCATTTAAAGGGATGCTGCCATAGTCTAACCCTACTGAACATTCTAGTATTCTATAGTACTACTGCAGTACTAAGCATGCAGTAGTCTTAGAGTACTACTGAATATTCTGCCACCCCAACTACTACTGCCTTAGCCTCCTAATGGGTGTAAGCCCCATGTCCATCCATG-------TCTTCCAGCTCCTTCTAAAG-------CCTGAATTATTTGTGTGttgaacaatactcattcttcctatccacgagcatggaatgtttttccatctgtttgtgtcatctatgatttctttgagcagcgttttgtagttctccttgcagatatcttccacctccctggttagctgtattcctagatattttattctttttgtggtcattgtgaatggattctgttcttgatttggctcttagctgagatgtttttggtgcctaggaatgctacagatttttgtatattgattttgtatcctggaactttgtccgagttgtttatcagattaagaagtgt--ttgggca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45854857 522 + 49145316 CATCACTTCATTTAAAGGGAGCCTG---TGGTCTAACCCGACGGAACATTCTAGTATTCTCCAGTACTGCTGCAGTACTAAGCATGA---AGTCTTAGAGTACTACTGAGTATTCTGCCACCCCGCCTACGACTGCCTTAGCCTCCTAGTGGATGTGAGCCCCACGTCCCTTCGTGTCTTCTCTCTTCCAGCTCCTTCCAAAGACTATGCCCTGAATTATCTGTGGGTCGAACTatattcattcttccgatccgtgagcatggaatgtttttccatgtgtttgtgttgtctgtggtttctgtgacagggtttctgtagttctccttgcagagatatttcagctccccagtcagctgtcttcctaggc-ttttattctttctgtggtgattgtgaatgaattctgttcttgatctggcagtcagcttagatgtttttggtgtacagaaatgctgccggtttttgtatattggttttctgtcccagaactttgccaaaggtgtttatcagattaagaagtatgactgggca i calJac3.chr22 I 326 I 4587 a score=217791.000000 s hg38.chr19_GL949747v2_alt 521501 91 + 729520 gagactgtggttttctaggtatagaatcatatcacctgcaaacagggatagtttgacttcctttcttcctatttggatgccttttatttc--t s panTro4.chr19 59797812 91 + 63644993 gagactgtggttttctaggtatagaatcacatcacctgcaaacagggatagtttcacttcctttcttcctatttggatgccttgtgtttc--t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56707724 93 + 60714840 gagactgtggttttctaggtatagaatcatatcacctgcaaacagggatagtttgacttcctttcttcctatttggatgccttttatttcttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103257695 93 - 106955855 gagactgtggttttctaggtatagaatcatatcatctgcaaacagggatagtttgacttcctttcttcctctttggatgcctttgatttcttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60540283 91 + 64156825 gagattgtggttttctaggtatagaatcacatcatctgcaaacagggatggtttgacttcctttcttcctatttggatgcctttcatttc--t i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55663379 91 + 59248254 gagattgtggttttctaggtatagaatcacatcatctgcaaacagggatggtttgacttcctttcttcctatttggatgcctttcatttc--t i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47780963 91 + 51301725 GAGACTgtggttttctaggtatagaatcacatcatctgcaaacagggatcgtttgacttcctttcttcctatttggatgcctttcatttc--t i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47500458 91 + 50890351 gagactgtggttttttaggtatagaatcatatcatctgcaaacagggatagtttgacttcctttcttcctatttggatgccTTTCATTTC--t i chlSab2.chr6 C 0 I 6308 e calJac3.chr22 45855379 4587 + 49145316 I a score=446537.000000 s hg38.chr19_GL949747v2_alt 521592 261 + 729520 ctcttgcctgattgctctagctaggacctccagtactatgttgaacagaagtagtgagagacggcatccatgtcttttgccagttttcaaggggaatacttccagcttttgcccattcaatatgatgttgactgtgagtttgtcatacatcattcttattattttgaaatatgtttcttcaatgcctagtttgtcgaggttttttagcataaagggatgttgaattttatcaaaagctctattgagaggattatgt-gtgtg s panTro4.chr19 59797903 261 + 63644993 ctcttgcctgattgctctagctaggacctccagtactatgttgaacagaagtagtgagagacggcatccatgtcttgtgccagttttcaaggggaatatttccagcttttgcccattcaatatgatgttgactgtgagtttgtcatacatcattcttattattttgaaatatgtttcttcaatgcctggtttgtcaaggttttttagcataaagggatgttgaattttatcaaaagctctattgagaggattatgt-gtgtg i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 56707817 258 + 60714840 ctcttgcctgattgctctggctaggacctccagtactatgttgaacagaagtagtgagagacggcatccatgtcttgtgccagttttcaaggggaatacttccagcttttgcccattcaatatgatgttgactgt--gtttgtcatacatcattcttattattttgaaatatg-ttcttcaatgcctagtttgtcaagattgtttagcataaagagatgttgaattttatcaaaagctctattgagatgattatgt-gtgtt i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 103257788 261 - 106955855 ctcttgcctgattgctctggctaggacctccagtactatgttgaacagaagtagtgagagacggcagccacgtcttgtgccagttttcaaggggaatacttccagcttttgcccattcagtatgatgctgactgtgagtttgtcatacatcattctgattattttgaaatatgtttcttcaatgcctagtttgtcaaggttttttagcataaagggatgtttaatttt-tcaaaagttctattgagataattatgtggtggg i nomLeu3.chr10 C 0 I 2 s rheMac3.chr19 60540374 261 + 64156825 ttctcgcctgattgctttggctaggacttccagtactatgttgaatagaagtagtgacagagggtatccatgtcttgtgtcagttttcaaggggaatactcccagcttttgcccattcaatattatgtaggctgtgagtttgtcatagatcttccttattattttgaagtacgtttcttcaatgcctagtttgtcgaggttttttagcataaagggatgttggattttatcaaaagctctattgagatgattatat-gtgtg i rheMac3.chr19 C 0 I 5554 s macFas5.chr19 55663470 261 + 59248254 ttctcgcctgattgctttggctaggacttccagtactatgttgaatagaagtagtgacagagggtatccatgtcttgtgtcagttttcaaggggaatactcccagcttttgcccattcaatattatgtaggctgtgagtttgtcatagatcttccttattattttgaagtacgtttcttcaatgcctagtttgtcgaggttttttagcataaagggatgttggattttatcaaaagctctattgagatgattatat-gtgtg i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47781054 261 + 51301725 ttctcgcctgattgctctggctaggacttccagtactatgttgaatagaagtagtgacagagggcatccatgtcttgtgtcagttttcaaggggaatactcccagcttttgcccattcaatattatgtaggctgtgagtttgtcatagatcttccttattattttgaagtacgtttcttcaatgcctagtttgtcgaggttttttagcataaagggatgttggattttatctaaagctctattgagatgattatat-gtgtg i papAnu2.chr19 C 0 I 9 e calJac3.chr22 45855379 4587 + 49145316 I e chlSab2.chr6 47500549 6308 + 50890351 I a score=53523.000000 s hg38.chr19_GL949747v2_alt 521853 53 + 729520 gggagggttgttctatttatgtgatgaatcatatttaagatttgtgtatattg s panTro4.chr19 59798166 53 + 63644993 gggggggttgttctatttatgtgatgaatcatatttaagatttgtgtatattg i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 56708076 53 + 60714840 gggggggttgtcctacttacgtgatgaatcatatttaagatttctgtatattg i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 103258051 53 - 106955855 gggggggttgttctgtttatgtgatgaatcacatttaagattcatgtatattg i nomLeu3.chr10 I 2 C 0 s macFas5.chr19 55663735 44 + 59248254 cgggggattgttct---------atgaatcacatttaagatttgtgtatattg i macFas5.chr19 I 4 I 5154 s papAnu2.chr19 47781324 44 + 51301725 tggggggttgtTCT---------ATGAATCACATTtaagatttgtgtatattg i papAnu2.chr19 I 9 I 4551 e calJac3.chr22 45855379 4587 + 49145316 I e chlSab2.chr6 47500549 6308 + 50890351 I e rheMac3.chr19 60540635 5554 + 64156825 I a score=132274.000000 s hg38.chr19_GL949747v2_alt 521906 277 + 729520 gccgggcactgtggctcatgcctgtaatcccagcactttgggaagccaaggcttgtggatcatgaggtcaggagatcgacaccatcctggctaacacggtgaaacctcgtctatactaaaaaacacaaaaaaattagccaggcgtggtggtgggcacctgtagtcccagctgctcgggaggctcaggcaggagaatggcgtgaatccaggaggcggagcttgcagtgagccaagttcacgccactacactccagcctgggcaacagagcgagactcc s panTro4.chr19 59798219 277 + 63644993 gccgggcactgtggctcatgcctgtaatcccagcactttgggaggctgaggcgggtggatcacgaggtcaggagatcgacaccatcctggctaacacggtgaaacctcgtctatactaaaaaatacaaaaaatttagccaggcgtggtggcaggcgcctgtagtcccagctgttcgggaggctgaggcaggagaatggcatgaatccaggaggcggagcttgcagtgagccaagttcacgccactacactccagcctgggcaacagagcgagactcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56708129 277 + 60714840 gccgggcgcggtggctcatgcctgtaatcccagcactttgggaggctgaggcaggcggatcacgaggtcaggagatcgacaccatcctggctaacatggtaaaacctcgcctctactaaaaaatacaaaaaaattagccaggtgtggtggcgggcacctgtagtcccagctgctcgggaggctgaggcaggagaatggcgtgaatccaggaggcagagcttgcagtgagccgagatcacgccactgcactccagcctgggcaacagagcgagactct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103258104 274 - 106955855 gccgggcgcggtggctcatgcctgtaattacagcactttgggaggccgaggagggcggatcacgaggtcaggagattgaggccatcctggataacacggtgaaaccccgtctctact-aaaaacacaaaaag-ttagctgggcgtggtggcgggtgcctgtagtctcagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagcggagatcgtgccactgcactccagcctgggcgac-gagcgagactcc i nomLeu3.chr10 C 0 I 2860 e calJac3.chr22 45855379 4587 + 49145316 I e chlSab2.chr6 47500549 6308 + 50890351 I e papAnu2.chr19 47781368 4551 + 51301725 I e macFas5.chr19 55663779 5154 + 59248254 I e rheMac3.chr19 60540635 5554 + 64156825 I a score=582144.000000 s hg38.chr19_GL949747v2_alt 522183 2259 + 729520 tatatcgaatcaaccttgcatcccagaaataaagcctacctgatggtggtggattagctttctgatgtgctgctggatagtttgctagtattttgttgaggatttttgcatttatgttcaacaaggatattgtcctgaagttttctggttttgttgtgtctctgccatgtttttgcatcaagatgatgctggtctcatagaatgagctggggaggcattcctcctcctgaatatttttggaacgtttcagtaggtatagtaccagctcttctttatatatcagatgggattcagctgtgagtctgtctggtactgggctttttctggtctgtaggatttttattactgattcaattttggagctcattattggtctgttcatgtattcaatttattcttggtttgatctcaggagggtgtatgtgtccaggaatttctccatttattctggattttctagtttgtgtgcatagaggtgttcataatattctctgatgattgtatttctgtggggtgagtggtaatataccctttgttgtttctaattgtgtttatccggatcatctctcttttcttctttattagtctaactagtcatctgtcttactaattttttcaaaaattctactcctcgatttgctgatcttctgaatgctttttcgtgtctcaatctccttcagctcagctctgattttggttatttcttgtttcctatgagctttggggttgatttcctcttggttctcttagttcctcttgttatgatgttaggttgttaatttgaactttttctagctttttgaagtgggagtttagtgctataaacttcccccttaacactgccttagctgtgtcccagagattctgctatatttacccaaaaattccagaacagactgcttaatttccatgcattgtacagttttgagtggttttcttagtatttattcctatttttattccactgtgctctgatttcgcttttctggatttgctaaggattgttttttttttttttgaaatggagtcttgctctgtcgcccaggctggagtgcagtggcgcaatctaggctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcctgagtagctgagactacaggtgcccgccaccccgcccggctaattttttttgtatttttagtaaagacggggtttcactgcgttagccaggatggtctcgatctcctgacctcatgatccgccagccttggcttcccaaagtgctgggattacaggtgtgagccaccgcgcccagcctgctaaggattgctgtatgtctgattgtatgattgactttagagtatgtgccatgaggcaatgaaaacaatgtagattctgttgttttgggggtggagagttctgtagatgtctgtcaggtccatttgatccactgctgagttcaggtcctgaatatctctgtttgcctcaatgatctaatactgtcggcgggatgttaaagtctccccctattattgtgtggttgtctaagtctcttcgttggtctctcagaacacgctttatgaatccgggtgcttccatgttaggtgcatatatatttaggatagttaggtcttcatgctctttttttaatt--ttttttttctttttctttttgattcagcagttgggctattacacactccttagcagattccgacttccgtggccactgtcctgctatggtcttcatgttgaattgaaccctttaccatgatttaatgcccttctttgccttttttgatctttgttggtataaagtctgttttgtctgaaattttaatagcagctcctgcatttttttttttttt--------ggctttccatttgcttggtagatttttctccatttctttactttgagcctatggatgtcattgcatatgagatgggtttcttataggcagcataatgttgagtcttgctttttttttttttttttttt--gagatggagtctcactctgtcacccaggctggagtgcagtggtatgatcttgactcactgcaacttctgcctcccaggttcaaatgattctcctgcctcagcctcccaaatagctgggattacaggtgtgtaccaccacgcccagctattttttttttttatt------------agagatgggatttcatcacattggccaggctaatgtcgaactcctgacctcaaatgatccacccacctcagcctcccaaagtgccggggttacaggcgtgagccactgcacctggcct s panTro4.chr19 59798496 2276 + 63644993 tatatcgaatcaaccttgcatcccagaaataaagcctacctgatggtggtggattagctttctgatgtgctgctggatagtttgctagtattttgttgaggatttttgcatttatgttcaacaaggatattgtcctgaagttttctggttttgttgtgtctctgccatgtttttgcatcaagatgatgctggtctcatagaaggggcttgggaggcattcctcctcctgaatgtttttggaatgtttcagtaggtatagtgccagctcttctttatatatcggatgggattcagctgtgagtctgtctggtactgggctttttctggtctgtaggccttttattactgattcaattttggagctcattattggtctgttcatgtattcaatttattcttggttcgatctcaggagggtgtatgtgtccaggaatttctccatttattctggattttctagtttgtgtgcatagaggtgttcataatattctctgatgattgtatttctgtggggtgagtggtgatataccctttgttgtttctaattgtgtttatccggatcatctctcttttcttctttattagtctaactagtcatctgtcttactaattttttcaaaaatccgactcctggatttgctgatcttctgaatgcttttttgtgtctcaatctccttcagctcagctctgattttggttatttcttgtttcctacgagctttggggttgatttcctcttggttctcttagttcctcttgttatgatgttaggttgttaatttgaactttttctagctttttgacgtgggagtttagtgctataaacttcccccttagcactgccttagctgtgtcccagagattctgctatatttacccaaaaattccagaacagactgcttaatttccatgcattgtacagttttgagtggttttcttagtatttattcctatttttattccactgtgctctgatttcgcttttctggatttgctaaggattgttttttttttttttgaaatggagtcttgctctgtcgcccaggctggagtgcagtggcgcaatctaggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggtgcccgccaccacacccggctaattttttttgtatttttagtaaagacggggtttcactgcattagccaggatggtctcgatctcctgacctcatgatccgccagccttggcctcccaaagtgctgggattacaggtgtgagccactgcacccagcctgctaaggattgctgtatgtctgattgtatgattgactttagagtatgtgccatgaggcaatgaaaacaatgtagattctgttgttttcggggtggagagttctgtagatgtctgtcaggtccatttgatccactgctgagttcaggtcctgaatatctctgtttgcctcaatgatctaacactgtcggcgggatgttaaagtctccccctattattgtgtggttgtctaagtctcttcgttggtctctcagaacacgctttatgaatccgggtgcttctatgttaggtgcatatatatttaggatagttaggtcttcatgctctttttttaatt--ttttttt-ctttttctttttgattcagcagttgggctgttacacactccttagcagattccgacttccgtggccactgtcctgctatggtcttcatgttgaattgaaccctttaccatgatttaatgcccttctttgccttctttgatctttgttggtataaagtctgttttgtctgaaattttaatagcagctcctgcatttttttttttttt----ttttggctttccatttgcttggtaaatttttctccatttctttactttgagcctatggatgtcattgcatatgagatgggtttcttataggcagcataatgttgaatcttgcttttttttttttttttttttttgagacggagtctcgctctgtcacccaggctggagtgcagtggcatgatcttgactcactgcaacctctgcctcccaggttcaaatgattctcctgcctcagcctcccaaatagctgggattacaggtgtgtaccaccacgcccagctatttttttttttttttttttttttttttagagatgggatttcatcacattggccaggctaatgtcgaactcctgacctcaaatgatccacccacctcagcctcccaaagtgccggggttacaggcgtgagccactgcacctggcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56708406 2248 + 60714840 tatatcgaatcaaacttgcatcccagaaatgaaacctacctgatggtgatggattagctttctgatgtgctgctggattgtttgctagtattttgttgaggattttggcatttatgttcaacaaggatattgtcctgaagttttctggttttgttgtgtctctgccatgtttttgcatcaagatgatgctggtctcatacaatgagctggggaggcattcctcctcctgagtttttttggaacgtttcagtaggt--------agctcttctttatatatcggatgggattcagctgtgagtttgtctggtactgggctttttctggtctgtaggctttttattactgattcaattttggagctcattattggtctgttcatgaattcaatttattcttggttcgatctcaggagggtgtatgtgtccaggaatttctccatttattctagattttctattttgtgtgcatagaggtgttcataatattctctgatgattgtatttctgtggggtgagtggtaatataccctttgttgtttctaattgtgtttatctggatcatctctcttttcttctttattagtctaactagtcatctgtcttactaattttttcaaaaatccaactcctggatttgctgatcttctgaatgctttttcgtgtctcaatctctttcagctcagctctgattttggttatttcttgtttcctacgagcttcggggttgatttcctcttggttctcttagttcctcttg---tgatgttaggttgttaatttgaactttttctagctttttgacatgggagtttagtgctataaacttcccccttaacactgccttagctgtgtcccagagattctgctatatttacccaaaaattacagaacagactgcttaatttccatgcattgtacagttttgagtggttttcttagtatttattcctatttttattccactgtgctctgatttcgcttttctggatttgctaaggatc-ttttttttttttttgaaatggagtcttgctctgtcgcccaggctggagtgcaatggcacaatctaggttcactgcaagctccgcctcctggattcacgccattctcctgcctcagcctcccaagtagctgggactacaggcgcccgtcaccacacccggctaa-tttttttgtatttttagtaaagatggggtttcactgtgttagccaggatggtctcgatctcctgatctcatgatccgcccgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggcctgctaaggattgttgcatgtctgattgtatgatcgactttagagtatgtgccatggggcaatgaaaacaatgtagattctgttgttttgggggtggagagttctgtagatgtctatcaggtccatttgatccagtgctgagttcaggtcctgaatatctttgtttgcctcaatgaactaatactgtcagcaggatgttaaagtctccccctattattgtgtggttgtctaagtctc----ttggtctctcagaacaccctttatgaatctgagtgcttctgtgttaggtgcata-atatttaggatagttaggtcttcatgttctttttttaatttattttttttctttttctttttgattcagcagatgggctgctacacactccttagcagattctgacatccatggccactgtccagctatggtcttcatgttgaattaaaccctttaccatgatttaatgcccttctttgccttttttgatctttgttggtataaagtctgttttgcctgaaattttaatagcagctcctgctttttttttttttttttttttttggctttccatttgcttggtagatttttctccatttctttactttgagcctatggatgtcattgcatatgagatgggtttcttatagacagcataatgttgagtcttgcttttttttttttttttt-----gagacggagtcttgctctgtcacccaggctggagtgtagtggtgtgatctcggctcactgcaacctctgcctctcaggtttaagcaattctcccgcttcagcctcctgagtagctgggattacaggcacccaccaccacacctggctaatctttgtattttta----------gtagagacagggttttgccatgttggccaggctggtctcgaactcctgacctc--gtgatccacccgcctcggcctcccaaagtgctgggattaccagcgtgaaccaccgcacctggcct i ponAbe2.chr19 C 0 I 4045 e calJac3.chr22 45855379 4587 + 49145316 I e nomLeu3.chr10 103258378 2860 - 106955855 I e chlSab2.chr6 47500549 6308 + 50890351 I e papAnu2.chr19 47781368 4551 + 51301725 I e macFas5.chr19 55663779 5154 + 59248254 I e rheMac3.chr19 60540635 5554 + 64156825 I a score=302657.000000 s hg38.chr19_GL949747v2_alt 524442 3358 + 729520 cttgcttctttatccaacttgccactctctgcattttaattaggacaattagtccatttacattcaaagttagcatttacatgtgcagattttttcctgtcatcatgttgttagctggtttggttattatgcagacttgtttgtgtggttgttttatagtgtcactggtttatgtacgtaagtgtgttttcttttggctggtgatggtcttttctttccatatttagcgttcctcttaggacctcttgtaaggcaggcctgatggtaataaattccctcagcatttgcttgtctgtaaaggatcttatttctccttcacttatgaaacttagtttggctgggaatgagattcttggttggaaattcttttcataagaacattaaatataggcccccaatctcttctggattgtagagtttctgctgaaaggtctgctgttagctcgatggcattccctttgtaggtgacctgccccttcttttttgctgccttttcacatttttttttttttttt--gagactgagtcttgctctgttgcccaggctgccaggctggagtgcaatggcgtgatctcggctcactgcaagctccgcctcccggattcacgccattctcctgcctcagcctccccagtagctgggactacaggtgcccaccaccacgcccagctaatttttta----tatttttttagtagagatggggtttcaccatgttagccaggatggtctcaatctcctgacctcgtgatccgcccgccttggtctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccgacatttctttctttcatttctaccttgaagaatctgatgattttgtgtcttggggatgctcttcttgtgtagtattttgcaggggttctct--gtttcctgcatttgattcttggcctctctagtgacgttggggaagttttcatgaacaatacactgaaatatgttttccatgttccttgctttctccccatctctttcggggatgccaatgggctatttggtctcttttcatgatcccatatttcttagaggttttgttcattattttttattctttt-tcttcatttttgtctgactgaattagttcagagagccagtattcatgctctgagattctttccttattttgctttattttgccattaatacttgtgatcgcattatgaaatctcgtagtgtgttttt-cagctccatcagatccgtttggttctttcaaaatgaccatctcatagattagcccctctgtcattttattgtaatctttaggttccttgcattgggtttcaactttctcctgaatcttgatgaccttaatttctatccatattctgaattctatttctgtcatttcagccaggtaaagagcccttgctgggaagcttgtgtggtaatttggaggaaggaagacactgttgctttttgagttgatggagttcttgctcagttctttctcatccatgtgggctaatgttcctttgagtgtgctgcaatttgaatttttttcttttttcttttaaccgtgatgtaatttgagcacagtcagtagacttcttttctggatggtttcagagggctggggcttcgcacagggtctttatttatagctaaattcttgtccttggtttcacagggaggtatattagcgagcatttttggtgttgaagtttgggctgcaatccggtaaatgatgcttcagcacaacggccagtaggtcattcctcatgattgccgctgtgctccctctcacgctctgaaagtgcgggctcctctcccacccaagtgctggctgcagatctgggctcggcactcccaggctgcacatcacagctctggggtgagctcagactttatgttccctccgtggcttgggggcagcaggggaagggaccttagcagcggttgtggcagacggcctttcacttgtcccttggaactccaccccagagagatgtggagccactatcag----tgcgatgagccaagagtggggcgactgcactgtgggtccaagctaggggccctgcctagtgatgagcaggggggacaggtgggtcacaggggtgacagactggcctcttctccttagggcagtttgctggaggtgtggttgaagcactcagagtctttgctccttccccagtctgagggcagcaaggccagtaccaccgcagtggcagcggcagagtgaccttccgttgcctctgggagctccgccacagagaaacgcagactcacagctgctgggaacgctccgccagagggtggggctgttgtgccgcggaatcaagctggggcttggtgaagagcagggggttgagggctcacagggagaggagactgagctcctctccgtatggcgactgcggtgtgctggaagcatgaatgaaggccgggcgcggtggactcacgcccggaatcccagcactttgggaggccgaggcgggcggatcacgaggtcgggagatcgagaccatcctggctaatctggtgaaaccccgtctctactgaaaacacaaaaaatgagccgggcgtggtggcgggcgcctgtagtcccagctactcgggaggaggatgaggctgaggcaggagaatggcgtgaacccgggaggcgcagcttgcagtgagccgagatcgggccactgcactgcagcgtgggcgacagagcgagactccgtctcaaataaataaataaataaata--------------------gaagcatgaatgaaggccccaggctccttgcttcttccccagatcacgggcagcagaggcagaacccttgccatggcagtggcagaggggctgtcagttgcctctgggagccactccccagggaaacacgagccaccaccagtgagtgtgctgagggcggggcagctgctctgcactcccgagctgggggctctgcctggtaaagtgggggtgggagctcacggggaagagagactggactcctctctgtctgatgGCTGTGGCATAAtgaccgggcccccacacatgaaaaagaattctgggaactcaaaaagccagtgTGTCcccaccatggaccccttggattgtgtttcaaatttctcctcaatttcgaagagcgtcctggccatccagattctgaattctataaccctcgtttcattcatctcaatgtagctaagaaccagatttctggggaactatcgagttgccagagttcttgtgttgattcttttttttttttcttttttttttcttttttgtggcagagtcttactctgtcgcccaggctggagtgcagtggcacgatctcagctcactgctgcaaccttcacctcccgggttcaagcgattctcctgtctcagcctcctgagta s panTro4.chr19 59800772 3391 + 63644993 cttgcttctttatccaacttgccactctctgcattttaattaggacaattagtccatttacattcaaagttagcatttacatgtgcggattttttcctgtcatcatgttgttagctggtttggttattatgcagacttgtttgtgtggttgttttatagtgtcactggtttatgtatgtaagtgtgttttctattggctggtgatggtcttttctttccatatttagcgttcctcttaggacctcttgtaaggcaggcctgatggtaataaattccctcagcatttgcttgtctgaaaaggatcttatttcttcttcacttatgaaacttagtttggctgggaatgagattcttggttggaaattcttttcataagaatattaaatataggcccccaatctcttctggcttgtagagtttctgctgaaaggtctgctgttagcttgatggcattccctttgtaggtgacctgccccttcttttttgctgccttttcactttttttttttttttttttgagactgagtcttgctctgttgcccaggctgccaggctggagtgcagtggtgcgatctcggctcactgcaagctccacctcccggattcatgccattctcctgccttagcctccccagtagctgggactacaggtgcccaccaccacgccccgctaatttttttgtattttttttttagtagagacggggtttcaccatgttagccaggatggtctcaatctcctgacctcatgatccgcccgccttggtctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccgacatttctttctttcatttctactttgaagaatctgatgattttgtgtcttggggttgctcttcttgtgtagtattttgcaggggttctctttgtttcctgcatttgattcttggcctctctagtgacgttggggaagttttcatgaacaataccctgaaatatgttttccatgttgcttgctttctccccatctctttcggggatgccaatgggctatttggtctctttacataatcccatatttcttagaggttttgttaattcttttttattcttttgtcttcatttttgtctgactgaattagttcagagagccagtattcatgctctgagattctttcctcattttgctttattctgccattaatacttgtgatcgcattatgaaatctcgtagtgtgttttttcagctctatcagatccgtttggttctttcaaaatgaccatctcatagattagcccctctgtcattttattgtaatctttagattcctcccattgggtttcaactttctcctgaatcttgatgaccttaatttctatccacattctgaattctatttctgtcgtttcagccaggtaaagagcccttgctgggaagcttgtgtggtaatttggaggaaggaagacactgttgctttttgagttgatggagttcttgctcagttctttctcatccatgtgggctaatgttcctttgagtgtgctgcaatttgaatttttttcttttttcttttaactgtgatgtaatttgagcacagtcagtagacttcttttctggatggtttcagagggctggggcttcgcacagggtctttatttatagctaaattcttgtccttggtttcacaaggaggtatattagcgagcatttttggtgttgaagtttgggctgcaatccggtaaatgatgcttacgcacaacggccagtaggtcattcctcatgattgccgctgtgctccctctcacgctctgaaagtgggggctcctctcccacccaagtgctggctgcagatctgggctcggcactcccaggctgcacatcacagctctggggtgagctcagactttatgttccctccgtggcttgggggcagcaggagaagggaccttagcagtggttgtggcagacggcctttcacttgtcccttggaactccaccccagagagatgtgaagctactgtcagccagtgcgatgagccaagagtggggcgactgcactgtgggtccaagctaggggccctgcctagtgatgagcaggggggacaggtgggtcacaggggtgacagactggcctcttctccttagggcagtttgctggaggtgtggttaaagcactcagagtctttgctccttccccagtctgagggcagcaaggccagtgccaccgcagtggcagcggcagagtggctttccgttgcctctgggagctccgccacagagaaacgcagactcacagctgctgggaacgctccgccagagggtggggctgttgcgccgcggaatcaagctggggcttggtgaagagcaggaggtcgagggctcacagggagaggagactcagctcctctccgtatggtgactgtggtgtgctagaagcatgaatgaaggccgggcgcggcgg-ctcacgcctggaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccatcctggctaatctggtgaaaccccgtctctactaaaaacacaaaaaattagccgggcgtggtggcgggcggttgtagtcccagctactcgggaggaggatgagactgaggcaggagaatggcgtgaacccgggaggcggagcttgcggtgagccgagatcgggccactgcactgcagcgtgggcgacagagcgagactccgtctcaaataaataaataaataaataaataaataaataaataaatagaagcatgaatgaagcccccagcctccttgcttcttccccagatcacgggcagcagcggcagaacccttgccctggcagtggcagaggggctgtcagttgcctctgggagccactccccagggaaacacgagccaccaccagtgagtgtgctgagggcagggcagctgctctgcactcccgagctgggggctctgcctggtaaagtgggggtgggagctcacagggaagagagactggactcctctctgtctgatggctgtggCATAATGACCGGgcccccacacatgaaaaagaattctgggaactcaaaaagccagtgtgtccccACCAtggactccttggattgtgtttcaaatttctcctcaatttcgatgagcttcctggccatccagattctgaattctatatccctcgtttcattcatctcaatgtagctaagaaccagatttctgggggactatcgaattgccagagttcttgtgttgattcttttttttttttttcttttttttctcttttgtggcagagtcttactctgtcgcccaggctggagtgcagtggcgcaatctcagctcactgctgcaagcttcacctctcgggttcaagcgattctcctgtctcagcctcctgagta i panTro4.chr19 C 0 C 0 e ponAbe2.chr19 56710654 4045 + 60714840 I e calJac3.chr22 45855379 4587 + 49145316 I e nomLeu3.chr10 103258378 2860 - 106955855 I e chlSab2.chr6 47500549 6308 + 50890351 I e papAnu2.chr19 47781368 4551 + 51301725 I e macFas5.chr19 55663779 5154 + 59248254 I e rheMac3.chr19 60540635 5554 + 64156825 I a score=60704.000000 s hg38.chr19_GL949747v2_alt 527800 240 + 729520 gctgggattacaggtgtgtgccaccacgcccggctaatttttgtatgtttagtagagcccgggttttgtcacgttggtcaggctggtctcaaactcttgacctccggtgatctgcccacttcagcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggccttggtgttgattctttctcttgtgtgagggctggtgttcctttaactgtgatgtcggttgagtacagtcg s panTro4.chr19 59804163 239 + 63644993 gctgggattacaggtgtgtgccaccacacccagctaatttttgtatgtttagtagagcccgggtgttgtcacgttgttcaggctggtctcaaactcttgacctccggtgatctgcccacttcagcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggccttggtgttgattctttctcttgtgtgagggctggtgttc-tttaactgtgatgtcagttgagtacagtcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56714699 240 + 60714840 gctgggattacaggtgtgtgccaccacacccagctaatttttgtatatttagtagagcccgggttttgtcacgttggtcaggctggtcttgaactcttgacctccagtgatctgcccacttcagcttcccaaagtgctgggattacaggtgtgagccaccgcgcccggccTTGgtgttgattctttctcctgtgtgagggctggtgttcctttaactgacatcacagttaaaggatgtca i ponAbe2.chr19 I 4045 I 13 e calJac3.chr22 45855379 4587 + 49145316 I e nomLeu3.chr10 103258378 2860 - 106955855 I e chlSab2.chr6 47500549 6308 + 50890351 I e papAnu2.chr19 47781368 4551 + 51301725 I e macFas5.chr19 55663779 5154 + 59248254 I e rheMac3.chr19 60540635 5554 + 64156825 I a score=351.000000 s hg38.chr19_GL949747v2_alt 528040 5 + 729520 cttgg s panTro4.chr19 59804402 5 + 63644993 tttgg i panTro4.chr19 C 0 C 0 e ponAbe2.chr19 56714939 13 + 60714840 I e calJac3.chr22 45855379 4587 + 49145316 I e nomLeu3.chr10 103258378 2860 - 106955855 I e chlSab2.chr6 47500549 6308 + 50890351 I e papAnu2.chr19 47781368 4551 + 51301725 I e macFas5.chr19 55663779 5154 + 59248254 I e rheMac3.chr19 60540635 5554 + 64156825 I a score=404572.000000 s hg38.chr19_GL949747v2_alt 528045 1541 + 729520 cttcatttctgggtgttttcagatgccaggactctgcacaggatctttatttgtggctgaatttttcccttcattgtatactggcaaaatttttcagtgttgtattttgaagtgtgatccagtaggtggcacttaaaagggttggccagcatacaggatcttagccacaaggctcttttgtagttttgtttcgttttttgtttcgttttttgacacagggtcttgttctgtcgcccaggctggagcacagtggcacaatctcggctcactgcagcctctacctatcaggctaagtgatcctcctgcctcagcctcctgagtagctgggactacaagcacgcagcaccataaagagaaaatttttgtaatttttttttt-----ttttttgtagagatggggtttcaccatgtttaccaggctggtctcaaactcctgggctcaagcaatctgcctgccttggccccctaactcttgtattttgacaaagtcggcagtagtgctctgtggttgtgaggaggggtgactccctcgcctggtccattcttgggccttggaggagcctcctacagtcactggctctgcacccactgtttcctttgttaggattgttctgcccacggggctccctcaggcagggcatggtgggcagacaggctgtatccttccccggccagccctatggagggaggaccaccccgcacctctgcaggctgatgaaatcaggtgtttcacccctctgaacgttctgagaatgagggctcctcacggcttggtcgccacctaacgtggtgagtccttctcagcaagggtgattggagccacatgatctgccatctcagtgcttcccaggggaacacagagctactgggcatggtggctcacacgtgtaatcccagtactttaggaggccgagatgggcagattgcgaagtcaggagactgagaccatcctggataacatggtgaaaccccgtctctactaaaaatacaaaaaaaaattagccaggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcagaagaatggtgtgaacccgggaggcggagcttgcagtgagccaagatcacaccactgcactccagcctgggcaacagagtgagacttcatctcaacaaaaaaa-----gaaaagaaaagaaaaacacagagctgcacaccccacagagttcaggcagaagggggtctgcagcgctggaagacccagcaagcctggcccgtctggctgcaagtggcaggggtgggtggagtcacccacttcaccatctgggtgctttccagggaagcatgcagccatgaccccgggcagagttcaggcagaagctgggccactgtgctggaaactggccttgagccttgtggagtaacggcaggtggagccatctcactgctcccacgcaccatgcccgtggcctctgcgggggctgtggtaacggcacccgactgctctggggtcaatgcctgcggaggtccccctggcttcagtgttgcctctgcaAAAACCCCAGTTGCAgcca s panTro4.chr19 59804407 1539 + 63644993 cttcatttctgggtgttttcagatgccaggactctgcacagaatctttatttgtggctggatttttccctttgttgtatactggcaaaatatttcagtgttgtattttgaagtgtgatccagtaggtggcacttaaaagggttggccagcatacaggatcttagccacaaggctcttttgtagttttgttttgttttctgtttcgttttttgacacagggtcttgctctgtcacccaggctggagtacagtggcacaatctcggctcactgcagcctctacctatcaggctaagtgatcctcctgcctcagcctcctgagtagctgggactacaagcacacaccaccataaagagaaaatttttgtaatttttttttt-----------gtagagatggggtttcaccatgtttaccaggctggtcttaaactcctgggctcaagcaatctgcctgccttggccccctaattcttgtattttgacaaagtcggcagtagtgctctgtggttgtggggaggggtgactccctcgcctggtccattcttgggctttggaggagcctcctacagtcactggctctgcacccaccgtttcctttgttaggattgttctgcccacagggctccctcaggcagggcatggtgggcagacaggctgtatccttccccggccagccctatggagggaggaccaccccactcctctgcaggctgatgaaatcaggtgtttcacccctctgaacgttctgagaatgagggctcctcacggcttggtcgccacctaacgtggtgagtccttctcagcaagggtgattggagccacatgctctgccatctcagtgct-cccaggggaacacagagctgcggggcatggtggctcacacctgtaatcccagtactttaggaggccgaggtgggcagatcacgaagtcaggagactgagaccatcctggataacatggtgaaaccccgtctctactaaaaatacaaaaaaaaattagcagggcgtggcggcaggtgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagccgagattgcgccactgcactccagcctgggcgacagagtgagacttcatctcaacaaaaaaaaaaaagaaaagaaaagaaaaacacagagctgcacaccccacagatttcaggcagaagggggtctgcagcgctggaagacccagcaagcctggcccgtctggctgcaagtggcaggggtgggtagagtcacccacttcaccatctgggtgctttccagggaagcatgcagccacggccccgggcagagttcaggcagaagctgggccactgtgctggaaactggccttgagccttgtggagtgacggcaggtggagccatctcactgctcccacgcaccatgcccgtggcctctgcaggggctgtggtaacggcactcgactgctctggggtcaaggcctgctgaggtccccctggcttcagtgttgcctctgcaaaaacccCAGTTGCAgcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56714952 1547 + 60714840 cttcatttctgggtgttttcagatgccaggactctgcacagaatctttatttgtggctggatttttcccttcattgtatactggcaaaatatttcagtgttgtattttgaagtgtgatccagtaggtggcacctaaaagggttggccagcatacaggatcttagccacaa-gctcttttgtagctttgtttcgttttttgttttgttttttgacacagggtcttgctctgtcacccaggctggagcgcagtggcacaatctcagctcactgcagcctctacctatcaggttaagtgatcctcctgcctcagcctcctgagtagctgggactacaagcacacaccaccataaagagaaaatttttgtaattttttttcttttttttttttgtagagatggggtttcaccatgtttaccaggctggtctcaaactcctgggctcaagcgatctgcctgccttggccccctaactcttgtattttgacaaagtcggtagtagtgctctgtggttgtggggaggggtgactccctcgcctggtccattcttgggccttggaggagcctcctacaatcactggctctgcacccaccgtttcctttattaggattgttctgcccatggggctccctcaggcagggcatggtgggcagacaggccgtatccttccccggccagctctatggagggaggaccaccccgctcctctgcaggctggtgaaatcaggtgtttcacccctctgaaagttctgagaatgaaggctcctcatggctcagttgccacccaacctggtgagtccttctcagcaagggtggttggagccatctgatctgccatctcagtgcttcccaggggaacacagagctgcggggcatggtggctcacacctgtaatcccagtactttgggaggccgaggcgggcagatcacgaagtcaggagactgagaccatcctggataacatggtgaaaccccgtctctactaaaaatac-aaaaaaaattagccaggcgtggtggcgggtgcctgtagttccagctactcgggaggctgaggcaggagaatggcgtgaaccggggaggtggagcttgcagtgagcttagatcctgccactgcactccagcctgggcaacagagtgagacttcatctcaaaaaaaaaa--aaaagaaagaaaagaaaaacacagagctgcacaacccacagagttcaggcagaagggggtctgcagtgctggaagacccaacaggtctggcccctctggctgcaagtggcaggggtgggtggagtcacccacttcaccatctgggtgctttccagggaagcatggagccatggcccccggcagagttcaggcagaagctgggccactgtgctggaaactggccttgagccttgtcgagtgagggcaggtggagccatctcactgctcccacgcaccacgcctgtggcctctgctggggctgtagtaatggcactcgactgctctgggatcaaggcctgtggaggtccccatggcttcagtgttgcctctgcaaaaacccCAGTTGCagccg i ponAbe2.chr19 I 13 C 0 e calJac3.chr22 45855379 4587 + 49145316 I e nomLeu3.chr10 103258378 2860 - 106955855 I e chlSab2.chr6 47500549 6308 + 50890351 I e papAnu2.chr19 47781368 4551 + 51301725 I e macFas5.chr19 55663779 5154 + 59248254 I e rheMac3.chr19 60540635 5554 + 64156825 I a score=2392.000000 s hg38.chr19_GL949747v2_alt 529586 4 + 729520 ggtg s panTro4.chr19 59805946 4 + 63644993 ggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56716499 4 + 60714840 ggtg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55668933 4 + 59248254 ggca i macFas5.chr19 I 5154 C 0 s papAnu2.chr19 47785919 4 + 51301725 ggca i papAnu2.chr19 I 4551 C 0 e calJac3.chr22 45855379 4587 + 49145316 I e nomLeu3.chr10 103258378 2860 - 106955855 I e chlSab2.chr6 47500549 6308 + 50890351 I e rheMac3.chr19 60540635 5554 + 64156825 I a score=372330.000000 s hg38.chr19_GL949747v2_alt 529590 303 + 729520 cggtggctcacgcttgtaatcccagcactttgggaggccgaggcaggtggatcacttgaagtcaggagttcaagaccagcctggccaacatggtgaaaccccgtttctactaaaaatacaaaaattatccaggcatggtggtgggcacctgtaatcccagctactcggaaggctgaggcagcagaattgcttgaacccgggaggcggag--------gagctgagattgcaccactgcactgcagcctgggcgacaaaacaagactctgtctcgaaaaataataacaataaaaaataaagatggcaaccat s panTro4.chr19 59805950 302 + 63644993 cggtggctcacgcttgtaatcccagcactttgggaggccgaggcaggtggatcacttgaagtcaggagttcaagaccagcctggccaacatggtgaaaccccgtttctactaaaaatacaaaaattatccaggcatggtggtgggcacctgtaatcccagctactcggaaggctgaggcaggagaattgcttgaacccgggaggcagag--------gagctgagattgcactactgcactgcagcctgggcgacacaaca-gactctgtctcgaaaaataataacaataaaaaataaagatggcaaccat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56716503 311 + 60714840 cggtggctcacgcttgtaatcccagcactttgggaggccgaggcaggtagatcacttgaagtcaggagttcaagaccagcctggccaacatggtgaaaccccatttctactaaaaatacaaaaattatccaggcatggtggtgggcacctgtaatcccagctactcagaaggctgaggcagaagaattgcttgaacccgggaggcagaggttgcagtgagctgagattgcaccactgcactgcagcctgggtgacaaagcgagactctgtcttgaaaaataataacaataaaaaataaagatggcaaccat i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55668937 308 + 59248254 tggcagctcatgcctgtaatcccagtactttgggaggccaaggcgggcagatcac--gaagtcaggagatcgagaccatcctggataacatggtggaaccacatttctactaaaaatacaaaaattatccaggcat-gtggcgggcacctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccgggaggcggagtttgcagtgggccgagattgcgccactgcactgcagcctgggcgacagagcgagactgtgtctcgaaaaataataacaaaaaaaaataaagatggcaaccat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47785923 308 + 51301725 tggcggctcacgcctgtaatcccagaactttgggaggccaaggcgggcagatcac--gaagtcaggagatcgagaccatcctggataacatggtgaaaccccatttctactaaaaatacaaaaattatccaggcatggtggcgggcacctgtaatcccagctactcgggaggctgaggcaggagaattgcctgaacccgggaggtggaggttgcagtgggccgagattgcgccactgcactgcagcctgggcgacagagcgagactctgtctcaaaaaataataac-aaaaaaaataaagatggcaaCCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47506857 309 + 50890351 cggcggctcatgcctgtaatcccagtactttgggagaccaaggcgggcagatcac--gaagtcaggagatcgggaccatcctggataacatggtgaaaccccatttctactaaaaatacaaaaattatccaggcgtggtggcgggcacctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccgagaggcaaaggttgcagtgggccgagattgtgccactgcactgcagcctgggcgacagagcgagattctgtctcgaaaaataataacaataaaaagtaaagatggcaaccat i chlSab2.chr6 I 6308 C 0 e calJac3.chr22 45855379 4587 + 49145316 I e nomLeu3.chr10 103258378 2860 - 106955855 I e rheMac3.chr19 60540635 5554 + 64156825 I a score=257540.000000 s hg38.chr19_GL949747v2_alt 529893 171 + 729520 agacactggagactactagatgggggggaagaaagggggttgaaa----aactgcctattgggtactatgctcagtacctgggtgacaggatcaatcgtactccaaacctcaGCATCACAAATTATTTAAATTTTTCTCtttttttaattt---ttt------------tgttgttgttgttgagacgaa s panTro4.chr19 59806252 174 + 63644993 agacactggagactactagatgggggggaagaaagggggttgaaa----acctgcctattgggtactaagctcagtacctgggtgacaggatcaatcgtactccaaacctcagcatcacaaattatTTAAATTTTTCTCtttttttaatttgttttt------------tgttgttgttgttgagatgaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56716814 165 + 60714840 agacactggagactactagacgaggaggaagaaagggggttgaaa----aactgcctattgggtactatgctcagtacctgggtgacaggatcaatcgtaccccaaacctcagcatcaTAAATTATTTAAAtttttctctttttttaattt---tt------------------ttttaattgagacgga i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60546189 171 + 64156825 agacactggagacgactagacggggaggaagagaggggcttgaaaaactaactgcctactgggtactacgctcagcacctgggtgacaggatccaccgtaccccaaacctcagcatcaTAAATTATTTACATGtttatttttatttattta---ttt----------------attttaattgagacaga i rheMac3.chr19 I 5554 C 0 s macFas5.chr19 55669245 171 + 59248254 agacactggagacgactagacggggaggaagagaggggcttgaaaaactaactgcctactgggtactatgctcagtacctgggtgacaggatccatcgtaccccaaacctcagcatcataaattatttacatgtttatttttatttattta---ttt----------------attttaattgagacaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47786231 170 + 51301725 AGACACTGGAGACGACTAGacggggaggaagagaggggctTGAAAAACTAACtgcctactgggtactatgctcagtacctgggcgACAGGATCCatcgtaccccaaacctcagcatcataaattatttacatgtttatttttatttattta---ttt-----------------ttttaattgagacaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47507166 183 + 50890351 agacactggagacaactagacggggaggaagagaggggcttgaaa----aactgcctactgggtactatgctcagtacctaggcgacaggatccatagtaccccaaacctcagcatcataaattatttacatgTTTATTtttatttattta---tttatttatttatttatttattttaattgagacaga i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45855379 4587 + 49145316 I e nomLeu3.chr10 103258378 2860 - 106955855 I a score=392857.000000 s hg38.chr19_GL949747v2_alt 530064 178 + 729520 gtctcactcttttgcccaggctggagtgcagtggtgtgatctcggctcactgcaagctctgcctcccaggttcacgccattctcctgccccaatctcccgagtagctgggactacacgcgcccgccaccacgtcctgctaattttttgtattttcagtagacacggggtttcaccgtg s panTro4.chr19 59806426 178 + 63644993 gtctcactctgttgcccaggctggagtggagtggtgtgatctcggctcactgcaagctctgcctcccgggttcacgccattctcctgccccaatctcccgagtagctgggactacaggcgcccgccaccacgtcctgctaattttttgtattttcagtagacacggggtttcaccgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56716979 178 + 60714840 gtctcactctgttgctcaggctggagtgcagtggtgtgatctcggctcactgcaagctccgcctcctaggttcacgccattctcctgccccaatctccctagtgtctgggactacaggcgcccgccaccacgccccgctaattttttgtattttcagtagagacggggtttcaccgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103261238 178 - 106955855 gtctcactctgtcgcccaggctggagtgcagtggtgtgatctcggctcactgcaagctccgcctcccaggttcacgtcattctcctgccccaatctcctgagtagctgagaccacaggcgcccgccaccacgcccagctaattttttgtattttcagtagagatggggtttcaccgtg i nomLeu3.chr10 I 2860 C 0 s rheMac3.chr19 60546360 178 + 64156825 gtctcactctgtggcccaggctggagtgccatggcgggatctcagctcactgcaagctccgcctcccggggtcacgccactctcctgaatcatcctcccaagtagctgggactacagtcgcccacccccacgcctggctaattttttgtatttttagtagagacgaggtttcactatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55669416 178 + 59248254 gtctcactctgtggcccaggctggagtgccatggcgggatctcagctcactgcaagctccacctcccgggttcacgccactctcctgactcatcctcccaagtagctgggactacagtcgcccacccccacgcctggctaattttttgtatttttagtagagacgaggtttcaccatg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47786401 177 + 51301725 gtctcactctgtggcccaggctggagtgccatggcgggaactcagctcactgcaagctcc-cctcccgggttcacgccactctcctgactcatcctcccaagtagctgggactacagtcgcccacccccacgcctggctaattttttgtatttttagtagagacgaggtttcaccgtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47507349 178 + 50890351 gtctcactctgtggcccgggctggagtgccatggcaggatctcagctcactgcaagctccgcctcctgggttcacaccattctcctgactcatcctcccaagtagctgggactacagtcgcccacccccacgcctggctaattttttgtatttttagtagagacggggtttcaccgtg i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45855379 4587 + 49145316 I a score=422411.000000 s hg38.chr19_GL949747v2_alt 530242 197 + 729520 ttagccaggatggtcttgatatcgtcaccttgtgatccacccgcctcggcctcccaaagtgctgggaatacaggcgtgagctaccgcacccggcc----TAAATTTTTTTTTAAATAAAGAATGGTAGGTTCTTCACACCCTAATGTATTTTTACTTCTCCCACAGAGAAGGAAAGGAATGGCTTCCCCATGGCAAGCCAC s panTro4.chr19 59806604 197 + 63644993 ttagccaggatggtctcaatatcctcacctcgtgatacaccggcctcggcctcccaaagtgctgggaatacaggcatgagctactgcacccggcc----TAAATTTTTTTTTAAATAAAGAATGGTAGGTTCTTCACACCCTAATGTATTTTTACTTCCCCCACAGAGAAGGAAAGGAATGGCTTCCCCATGGCGAGCCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56717157 197 + 60714840 ttagccaggatggtctcgatctcctcacctcgtgatccacccgcctcggcttcccaaagtgctgggaatacaggcgtgagctaccgcacccagcc----TAAATTTTTCTTTAAATAAAGAATGATAGGTTCTTCACACCCTAATGTATTTTTACTTCCCCCACAGAGAAGGAAAGGAATGGCTTCCTCATGGCAAGCCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103261416 197 - 106955855 ttagccagcatggtctcgataccctgacgtcgtgatccacccgcctcggcctcccaaagtgctgggaatacaggcgtgagccactgcgcccggcc----TAAATTTTTCTTTAAATAAAGAATGATAGATTCTTCACACCCTAATGTATTTTTACTTCCCCCACAGAGAAGGAAAGGAATAGCTTCCCAATGGCCAGCCAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60546538 139 + 64156825 ttagccaagatggtctcgatctcctgacctcgtgttccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacacctggcc----TAAATTTTTCTTTAAATAAAGAATGACAGGTTCTTCATACCCTA---------------------------------------------------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55669594 139 + 59248254 ttagccaagatggtctccatctcctgacctcgtgttccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacacctggcc----TAAATTTTTCTTTAAATAAAGAATGACAGGTTCTTCATACCCTA---------------------------------------------------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47786578 139 + 51301725 ttagccaagatggtctcgatctcctgacctcgtgttccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcacctggcc----taaatttttctttaaataaagaatGACAGGTTCTTCATACCCTA---------------------------------------------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47507527 197 + 50890351 ttagccaagatggtctcgatctcctgacctcgtgatctgcccgccttagcctcccaaagtgctgggattacaggcgtgagccaccgcacctggcc----TAAATTTTTCTTTAAATAAAGAATGACAGGTTCTTCACACCCTAATGTATTTTTACTTTCCCCACAAAGAAGGAAAGGAATGGCTTCCCCACAGCGGACCAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45859966 201 + 49145316 ttcgtcgggctggtcttgaactcctgaccttgtgatccaccctcctcggcctcccaaagtgctgggatttcaggcatgagccactgcgcccggcctatttaaaattttttaaaaataaagaattataGGTTCTTCACACCCTAATTTATTTTTAATTCCCCCACGGAGAAGGAAGGGAACGGCTTCCCCGTGACGGGACAC i calJac3.chr22 I 4587 C 0 a score=982512.000000 s hg38.chr19_GL949747v2_alt 530439 347 + 729520 CTCAGTCTGGGCTTTCTTTTCTTCCAGGGGACTTTCCCATGCCTTTCATATCTGCCAAATCGAGTCCTGTGATTCCCTTGGATGGATCTGTGAAAATCCAGTGCCAGGCCATTCGTGAAGCTTACCTGACCCAGCTGATGATCATAAAAAACTCCACGTACCGAGAGATAGGCAGAAGACTGAAGTTTTGGAA---------------------TGAGACTGATCCTGAGTTCGTCATTGACCACATGGACGCAAACAAGGCAGGGCGCTATCAGTGCCAATATAGGATAGGGCACT-ACAGGTTCCGGTACAGTAACACCCTGGAGCTGGTAGTGACAGGTAAGGAAACATCCAGGGTCCACAGCCCT s panTro4.chr19 59806801 347 + 63644993 CTCAGTCTGGGCTTTCTTTTCTTCCAGGGGACTCTCCCATGCCTTTCATATCTGCCAAATCGAGTCCTGTGATTCCCTTGGATGGATCTGTGAAAATCCAGTGCCAGGCCATTCGTGAAGCTTACCTGACCCAGCTGATGATCATAAAAAACTCCACGTACCGAGAGATAGGCAGAAAACTGAAGTTTTGGAA---------------------TGAGACTGATCCTGAGTTCATCATTGACCACATGGACGCAAACAAGGCAGGGCGCTATCAGTGCCAATATAGGATAGGGCACT-ACAGGTTCCGGTACAGTGACACCCTGGAGCTGGTAGTGACAGGTAAGGAAACATCCAGGGTCCACAGCCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56717354 347 + 60714840 CTCAGTCTGGGCTTTATTTTCTTCCAGGGGACTTTCCCATGCCTTTCATATCTGCCAAATCAAGTCCTGTGATTCCCTTGGATGGATCTGTGAAAATCCAGTGCCAGGCCATTCGTGAAGCTTACCTGACCCAGCTGATGATCCTAAAAAACTCCACGTACCGAGAGATAGACAGAAAACTGAAGTTTTGGAA---------------------TAAGACTGATCCTGAGTTCATCATTAACCACATGGACACAAACAAGGCAGGGCGCTATCGGTGCCAATATAGGATAGGGCAAT-ACATGTTCCGGTACAGTGACACCCTGGAGCTGGTAGTGACAGGTAAGGAAACATCCAGGGTCCACAGCCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103261613 347 - 106955855 CTCAGTCTGGGCTTTATTTTCTTCCAGGGGACTCTCCCATGCCTTTCATATCTGCCAAATCAAGTCCTGTGATTCCCTTGGGTGGATCTGTGAAAATCGAGTGCCAGGCCATTCGTGAAGCATACCTGACCCAGCTGATGATTCTAAAAAACTCCACGTACCAAGAGATAGGCAGAAGACTGAAGTTTTGGAA---------------------TGAGACCAATCCTGACTTCATCGTTAACCACATGGATGCAAACAAGGCAGGGCGCTATCAGTGCCAATATAGGATAGGGCACT-ACAGGTTCCGGTACAGTGACACCCTGGAGCTGGTAGTGACAGGTAAGGAGACATCCAGGGTCCACAGCCCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60546677 332 + 64156825 ---------------ATTTTCTTCCAGGGAACTTTTCCACGCCTTTCATATCTACCAGGTCAAGTCCTGTGGTTCCCTGGGGTGGGTCTGTGAGAATCCAGTGCCAGGCCATTCCTGACGCTTACCTGATCTGGCTGATGATGCTAAAAAACTCCACGTACGAGAAGAGAGACGAAAAACTGGGGTTTTGGAA---------------------TGATACTACGCCTGAGTTCGTCATTGACCACATGGACGCGAACAAAGCAGGGCGCTATCAGTGCCGATATAGGATAGGGTTCT-CCAGGTTCCGGTACAGTGACACCCTGGAGCTAGTGGTGACAGGTAAGGAAACATCCAGGGTCCACAGCCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55669733 332 + 59248254 ---------------ATTTTCTTCCAGGGAACTTTTCCACGCCTTTCATATCTACCAGGTCAAGTCCTGTGGTTCCCTGGGGTGGGTCTGTGAGAATCCAGTGCCAGGCCATTCCTGACGCTTACCTGATCTGGCTGATGATGCTAAAAAACTCCACGTACGAGAAGAGAGACGAAAAACTGGGGTTTTGGAA---------------------TGACACTACGCCTGAGTTCGTCATTGACCACATGGACGCGAACAAAGCAGGGCGCTATCGGTGCCGATATAGGATAGGGCTCT-CCAGGTTCCGGTACAGTGACACCCTGGAGCTAGTGGTGACAGGTAAGGAAACATCCAGGGTCCACAGCCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47786717 332 + 51301725 ---------------ATTTTCTTCCAGGGAACTTTTCCACGCCTTTCATATCTACCAGGTCAAGTCCTGTGGTTCCCTGGGGTGGGTCTGTGAGAATCCAGTGCCAGGCCATTCCTGACGCTTACCTGACCTGGCTGATGATGCTAAAAAACTCCACGTACGAGAAGAGAGGCGAAAAACTGGGGTTTTGGAA---------------------TGACACTAAGCCTGAGTTCGTCATTGACCACATGGACGCGAACAAAGCAGGGCGCTATCGGTGCCGATATAGGATAGGGCTCT-CCAGGTTCCAGTACAGTGACACCCTGGAGCTGGTGGTGACAGGTAAGGAAACATCCAGGGTCCACAGCCct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47507724 347 + 50890351 CTCAGTCTGGGCTTTATTTTCTTCCAGGGGACTTCCCCACGCCTTTCATATCTACCAGTTCAAGTCCTGTGGTTCCCTTGGGTGGGTCTGTGAGAATCCAGTGCCAGGCCATTCCTGACGCTTACCTGATCTGGCTGATGATGCTAAAAAACTCCACGTACGAGAAGAGAGACGAAAAACTGGGGTTTTGGAA---------------------TGATACTACGCCGGAGTTCGTCATTGACCACATGGACGCAAACAAAGCAGGGCGCTATCGGTGCCGATATAGGATAGGGCACT-CCAGGTTCTGGTACAGTGACACCCTGGAGCTGGTGGTGACAGGTAAGGAAACATCCAGGGTCCACAGCCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45860167 340 + 49145316 CTGAGTCTGGGCGTTTTCTTCTTCTAGGGAACGTTCCGATGCCTCTCATATTTGCCAGATCAAGTCCTGTGGTTCCCCAGCATGGATCTGTGAAAATCCAGTGCCAGAGCAGTGCTGAGTCTTTCTTCACCCAGCTGGTGATCCAAAAAAACTCCACGTATGAGGAGGTAGACAGGAAACTGGGGTTTTGGAA---------------------CGAGAGT------GAGTTCGTCATTGACCGCATGGACACAAACACGGCAGGGCGCTATCACTGCCGATACAAGAGAGGCTTCA-ACTGGTCACACTACAGTAACGCCCTGGAGCTGGTGGTGACAGGTAAGGAAACATCCA-GGTCCACGGCCGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102944793 334 + 122678785 CCCAGTCT----CTTGTTTCCTTCCAGGGATCCTCCCCAAACCCACCATCTGGACTGAGCCAGGTTCTGTGATCCCCTGGGGGACACCTGTGACCATCTGGTGTCAGG--------GGAGC-------------CTGAAGGCCCAGGAGTACCTCCTGCATAAAGAG------GGAAAGTTATGGCCTTGGGAGAGACAGCCTGCACTGGAACCCAAGGACAAGGCCAAGTTCTCCATCATGTACATGACAGCAA--TATGCAGGACGATATTGCTGCTACTATAGAA-GGGCCACTGACCAGTCACATTACAGTGACCCCTTAGAGCTGGTGGTGACAGGTGAGAGTCCACTTAGGGTCC-CAGACCT i canFam3.chr1 N 0 N 0 a score=397738.000000 s hg38.chr19_GL949747v2_alt 530786 155 + 729520 GGTGTGA---------------TTTTTTTCTTATTTTTaatagag--tatttttcaagaagttttagatttacaaacaaaaaaaaa-----------tt--gatgattgcttcagagagttctcagccatctggcaccccacttcccccagagttaacatcttacattagtatggcacatttctt s panTro4.chr19 59807148 156 + 63644993 GGTGTGA---------------TTTTTTTCTTAtttttaatagag--tatttttcaagaagttttagatttacaaacaaaaaaaaa----------att--gatgattgcttcagagagttctcagccatctggcaccccacttcccccagagttaacatcttacattagtatggcacatttctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56717701 151 + 60714840 GGTGTGA---------------TTTTTTTCTTATTTTGAATA------ATttttcaagaagttttagatttacaaacaaaaaaaaa-----------tt--gatgattgcttcagagagttctcagccatctggcaccccacttcccccagagttaacatcttacattagtatggcacatttctt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103261960 156 - 106955855 GGAGCGA---------------TTTTTTTATTATTTTTAACAGAG--TATttttcaagaagttttagatttccaaacaaaaaaaaa----------att--gatgattgcttcagagagttctcagctatctggcaccccacttctcccggagttaacatcttacattagtgtggcacatttctt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60547009 158 + 64156825 GGTGTGA--------------TTTTTTTTCTTATTTttaatagag--tatttttcgataagttttagatttacagaaaaaagaaaa----------attgagatgactgcttcacagagttctcagctatctggca-cccacttcccccagagttaacatctgacattactatggcacatttctt i rheMac3.chr19 C 0 I 2957 s macFas5.chr19 55670065 158 + 59248254 GGTGTGA--------------TTTTTTTTCTTAtttttaatagag--tatttttcgataagttttagatttacagaaaaaagaaaa----------attgagatgactgcttcacagagttctcagctatctggca-cccacttcccccagagttaacatctgacattactatggcacaTTTCtt i macFas5.chr19 C 0 I 4820 s papAnu2.chr19 47787049 158 + 51301725 ggtgtga--------------ttttttttcttatttttaatagag--tatttttcgataagttttagatttacagaaaaaagaaaa----------attgagatgaCTGCTTCACAGAGTTCTCAGCTATCTGGCA-CCCACTTCCCCCAGAGTTAACATCTGACATTACTAtggcacatttctt i papAnu2.chr19 C 0 I 1047 s chlSab2.chr6 47508071 157 + 50890351 GGTGTGA--------------TTTTTTTTCTTATTTTTAATAGAG--TATttttcgataagttttagatttaca-aaaaaaaaaaa----------attgagatgactacttcacagagttctcagctatctggca-cccacttcacccagagttaacatctgacatcactgtggcacatttctt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45860507 184 + 49145316 GGTGTGGTTTTTTTTGTTTGTTTTTTTTTCTTAtttttaatagagtttcttttttgagaatttttagatttgcaaaaagagagagagcgagaaaatatcaagatggttgcttcagagagttctcagatatctggca-ccccatttccccagagttaacatcttacattagtatggcacattcctt i calJac3.chr22 C 0 C 0 a score=7030.000000 s hg38.chr19_GL949747v2_alt 530941 7 + 729520 accatta s panTro4.chr19 59807304 7 + 63644993 accatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56717852 7 + 60714840 accatta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103262116 7 - 106955855 accatta i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47508228 7 + 50890351 accatta i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45860691 7 + 49145316 tctttta i calJac3.chr22 C 0 I 1362 e papAnu2.chr19 47787207 1047 + 51301725 I e macFas5.chr19 55670223 4820 + 59248254 I e rheMac3.chr19 60547167 2957 + 64156825 I a score=228301.000000 s hg38.chr19_GL949747v2_alt 530948 279 + 729520 atgaacaaatatcgacacattcccagctacagtctacagtttatttacattttcttag--tttttacctgatagtctttctctgttccaggatcccattcaagatttcacattgcggctgggagtggtggctcacgcctgtaatcccaacacttagggaagccgaggcgggtggatcacccaaggtcaggagttcgagaccagcctggccaacatggtgaattccccgtctctactgaaaat-gCAACAATCgctgggcgcggtggctcacgcctgtaatcc s panTro4.chr19 59807311 279 + 63644993 atgaacaaatatcgacacattcccagctacagtctacagcttatttacattttcttag--tttttacctgatagtctttctctgttccaggatcccattcaagatttcacattgcggccgggagcggtggctcacgcctgtaatcccaacacttagggaagccgaggcgggtggatcacccaaggtcaggagttcgagaccagcctggccaacatggtgaattccccgtctctactgaaaat-gcaacaatCgccgggcgcagtggctcacgcctgtaatcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56717859 281 + 60714840 atgaacaaatatcgacacgttctcagctaaagtctatagcttatttacattttcttagtttttttacctgatagtctttctctgttccaggatcccattcaagatttcacattgcggccgggcgtggtggttcacgcctgtaatcccagcacttagggaagccaaggcgggtggatcacccgaggtcaggagttggcgaccagcctggccaacatagtgaattccccgtctctactgaaaat-gcaacaatcgctgggcgcggtggctcacgcctgtaatcc i ponAbe2.chr19 C 0 I 10 s nomLeu3.chr10 103262123 279 - 106955855 atgaacaaatatcgacacattctcagctagagtctatagcttatctacatttttgtag--tttttacctgatagtctttctctgttccaggatcccagtcaagatttcacattgcggctgggcgtggtggctcacgcctgtaatcccagcacttaggaaagcccacgcaggtggattacccgaggtcaggagttcaagaccagcctggccaacatggtgaattccccgtctctactgaaaat-gcagcaatcattgggcgcggtggctcacgcctgtaatct i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47508235 279 + 50890351 atgaacaaatagtgacagattctcagctaaagtctatcgtttatttacattttcttag--tttttacctgatagtctttctctgttccaggatcccattcaagatttcacattgcggccgggcgcagtggctcaggcctgtaatcccagcacttagggaggctgaggtgggtggatcacctgaggtcaggagttcgagaccagcctggccaacacagtgaa-accccgtctctactaaaaatggaaaaaATTgccgggcgcggtggctcacgcctgtaatcc i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45860698 1362 + 49145316 I e papAnu2.chr19 47787207 1047 + 51301725 I e macFas5.chr19 55670223 4820 + 59248254 I e rheMac3.chr19 60547167 2957 + 64156825 I a score=22493.000000 s hg38.chr19_GL949747v2_alt 531227 53 + 729520 caacactttgggtggctgaggtgggtggatcacctgaggtcaggagttcgaga s panTro4.chr19 59807590 53 + 63644993 caacactttgggtggctgaggtgggtggatcacctgaactcaggagttcgaga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103262402 53 - 106955855 cagcacttttggtggctgaggcaggtggatcaactgaggtcaggagttcgaga i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47508514 51 + 50890351 cagcactttgggaggccgaggcgggcggatcac--aaggtcaggagatcgaga i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56718140 10 + 60714840 I e calJac3.chr22 45860698 1362 + 49145316 I e papAnu2.chr19 47787207 1047 + 51301725 I e macFas5.chr19 55670223 4820 + 59248254 I e rheMac3.chr19 60547167 2957 + 64156825 I a score=49159.000000 s hg38.chr19_GL949747v2_alt 531280 83 + 729520 ccagcctggccaacacagtgaaacctcgtctc-----tactaaaaatggaaaaaattggccaggcctggtggcacacgcctgtaatcc s panTro4.chr19 59807643 83 + 63644993 ccagcctggccaacacagtgaaaccccgtctc-----tactaaaaatggaaaaaattggccaggcctggtggcacacgcctgtaatcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103262455 83 - 106955855 acagcctgggcaacacagtgaaacctcgtctc-----tacttaaaatggaaaaaaTTGGCCGGATATGGTGGCACATGCTTGCAATCC i nomLeu3.chr10 C 0 M 724 s papAnu2.chr19 47788254 88 + 51301725 ccagcctgggctacagagcgagactccgtctcaaaaaaaaaaaaaatggaaaaaattggctgggcctggtggcacgtgcctgtaatcc i papAnu2.chr19 I 1047 C 0 s chlSab2.chr6 47508565 71 + 50890351 ------------ccacggtgaaaccctgtctc-----tactaaaaatacaaaaaattagttgggcgcggtggcagtcgcctgtagtcc i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56718140 10 + 60714840 I e calJac3.chr22 45860698 1362 + 49145316 I e macFas5.chr19 55670223 4820 + 59248254 I e rheMac3.chr19 60547167 2957 + 64156825 I a score=64842.000000 s hg38.chr19_GL949747v2_alt 531363 133 + 729520 cagctacttgggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgagccaagatcacaccactgcactccaggctgggcgacagggcgagactccatctcaCACACACACACACACA s panTro4.chr19 59807726 131 + 63644993 cagctacttgggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgagccaagatcacgccactgcactccagcctgggcgacagggcgagactccatctcaCACACACACACAAA-- i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47788342 133 + 51301725 ctgctacttgggaggctgaagcaggagaattgcttgaacccgggaggcggaggttgcagtgagccgagatcacgccactgcactccagcctgggtgacagagcgagactctgtctctcacacacacacacaca i papAnu2.chr19 C 0 I 39 s chlSab2.chr6 47508636 133 + 50890351 cagctactcaggaggctgaggcaggagaatggtgtgaacccaggaggcggaggttgcagtgagccgagatcacgccactgcactccagcctgggtgacaaagcgagactctgtctcTcacacacacacacaca i chlSab2.chr6 C 0 I 849 e ponAbe2.chr19 56718140 10 + 60714840 I e calJac3.chr22 45860698 1362 + 49145316 I e nomLeu3.chr10 103262538 724 - 106955855 M e macFas5.chr19 55670223 4820 + 59248254 I e rheMac3.chr19 60547167 2957 + 64156825 I a score=8658.000000 s hg38.chr19_GL949747v2_alt 531496 36 + 729520 --------------AAGATTTCACATTGCATTCAGGTGTCATGTATCttt s panTro4.chr19 59807857 36 + 63644993 --------------AAGATTTCACATTGCATTCAGGTGTCATGTATCttt i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47788514 50 + 51301725 aacacacacacacacaggtttcaCATTGCATTCAGGTGTCATGTATCTTT i papAnu2.chr19 I 39 I 1762 e ponAbe2.chr19 56718140 10 + 60714840 I e calJac3.chr22 45860698 1362 + 49145316 I e nomLeu3.chr10 103262538 724 - 106955855 M e chlSab2.chr6 47508769 849 + 50890351 I e macFas5.chr19 55670223 4820 + 59248254 I e rheMac3.chr19 60547167 2957 + 64156825 I a score=33415.000000 s hg38.chr19_GL949747v2_alt 531532 388 + 729520 tttttttttttttttttttttgagatggagtcccactgtgttgcccaggctggagtgcagtggcacaatctcggctcactgcaagctccaacctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcctggctaattttttgtatttttagtagagatagggtttcactgtgttagccaggatggtctcaatcttctgacctcgtgatccgcccgcctggcctcccaaagtgctgggattactggcgtgagccaccacgcccggcccccgaaaatgctgggattacaggcatgagccaccgcacctggcctcccaaagtgctgggattccaggcgtgagccaccgtgcccgg s panTro4.chr19 59807893 375 + 63644993 tttttttt-------------gagacggagtcccgctgtgttgcccaggctggagtgcagtggcacaatctcggctcactgcaagctccaacctcccgggttcacgccattctcctgcctcagcctccggagtagctgggactacaggcgcccgccaccacgcctggctaattttttgtatttttagtagagacagggtttcaacgtgttatccaggatggtctcaatcttctgacctcgtgatccgcccgcctggcctcccaaagtgctgggattactggcgtgagccactgcgcccggcctccgaaaatgctgggattacaggcatgagccaccgcacccagcctcccaaagtgctgggattccaggcgtgagccaccgcgcccgg i panTro4.chr19 C 0 C 0 e ponAbe2.chr19 56718140 10 + 60714840 I e calJac3.chr22 45860698 1362 + 49145316 I e nomLeu3.chr10 103262538 724 - 106955855 M e chlSab2.chr6 47508769 849 + 50890351 I e papAnu2.chr19 47788564 1762 + 51301725 I e macFas5.chr19 55670223 4820 + 59248254 I e rheMac3.chr19 60547167 2957 + 64156825 I a score=24230.000000 s hg38.chr19_GL949747v2_alt 531920 99 + 729520 caggtgtcatgtaTCTTTaggtttgtcttggctgtcacagcttctcagatgttgctggttttccatgaccttgtcagttttgagggtagtggtccatta s panTro4.chr19 59808268 99 + 63644993 caggtgtcatgtatctttagGTTTGtcttggctgtcacagcttctcagatgttgctggttttccatgaccttgtcagttttgagggtagtggtccataa i panTro4.chr19 C 0 C 0 s macFas5.chr19 55675043 99 + 59248254 caggtgtcatgtatctttagctttctcccggctctcacagcttctccgatgttgctggttttccatggccttgtcagttttgagagtagaagtccatca i macFas5.chr19 I 4820 C 0 e ponAbe2.chr19 56718140 10 + 60714840 I e calJac3.chr22 45860698 1362 + 49145316 I e nomLeu3.chr10 103262538 724 - 106955855 M e chlSab2.chr6 47508769 849 + 50890351 I e papAnu2.chr19 47788564 1762 + 51301725 I e rheMac3.chr19 60547167 2957 + 64156825 I a score=61998.000000 s hg38.chr19_GL949747v2_alt 532019 136 + 729520 ttttcaagggtactcccactactggaaattgtcc-gatgttttgctcatgactagactgagttatgggtcattgcaggcaagaccacagaagcaaagtgccatttcatctcctcatagcaaaggtttaaactgt-cca s panTro4.chr19 59808367 134 + 63644993 ttttcaagggtactcccactactggaaattgtcc-gatgttttgctcatgactagactg--ttatgggtcattgcaggcaagaccacagaagcaaagtgccatttcatctcctcatagcaaagttttaaactgt-cta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56718150 138 + 60714840 TTTTCGAGGGTACTGCCACTactggaaattgttcggatgttttgctcatgactagactgagttatgggttattgcagggaagaccagaggagcaaagtgccatttcatcacctcatagcaaagatttaaacagtccca i ponAbe2.chr19 I 10 C 0 s macFas5.chr19 55675142 131 + 59248254 ctttcaagggtactcccactattggaaattgtcc-gatgtgttgctcatgactagactgagttatgggttgttg-----aagaccacagaagcaaagtgccatttcatctcctcatagcaaaggtttaaactgt-cca i macFas5.chr19 C 0 C 0 e calJac3.chr22 45860698 1362 + 49145316 I e nomLeu3.chr10 103262538 724 - 106955855 M e chlSab2.chr6 47508769 849 + 50890351 I e papAnu2.chr19 47788564 1762 + 51301725 I e rheMac3.chr19 60547167 2957 + 64156825 I a score=488404.000000 s hg38.chr19_GL949747v2_alt 532155 584 + 729520 tgggaacatgactgtggatgttgagctggctgttgttgaaagcctggctgAAGTAGtaactgtggccagacaccgtggctcgtgcctgtaatcccagcacTTTGGGAggctgggcgccgtggctcacgcc-----------------------------------------------tgtaatcccagcactttgagaagccgagatgggcagatcacttaagcccaggagaccagcct-gggcaacatagtaagaccccatctgtac-aaaaaatcaaaaaattagctgggcatggtggcacccacctgtagtctcagttacttgagaggctgagatggtaggatcacctgagcctgggaggtcgaggctgcagtgagccgtgattatgccactgccct-cagcctgggcggcagagtgagaccctctctaaaataaataaat--------tctaaaaaagaaaaaaGAggctgggcactgtggttcacgcctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcagggattcaagaccagcctgaccaacatggggaaacctcatctttactaaaaatacaaaaattagctgggcgtggtggcgggtgcctgtaat-cccagcta s panTro4.chr19 59808501 584 + 63644993 tgggaacatgactgtggatgttgagctggctgttgttgaaagcctggctgaagtagtAACTGTggccaggcaccgtggcttgtgcctgtaatcccagcactttgggaggccgggcgccgtggctcacgcc-----------------------------------------------tgtaatcccagcactttgagaggccgagatgggtagatcacttaagcccaggagaccagcct-gggcaacatagtaagaccccatctgtac-aaaaaatcaaaaaattagctgggcatggtggcacccacctgtagtctcagctacttgagaggctgagatggtaggatcacctgagcctgggaggtcgaggctgcagtgagccgtgattatgccactgccct-cagcctgggcgacagagtgagaccctctctaaaataaataaat--------tctaaaaaagaaaaaaGAggctgggcactgtggttcacgcctgtaatcccagcactttgggaggctgaggcaggcggatcacctgaggtcagggattcaagaccagcctgaccaacatggggaaacctcatctttactaaaaatacaaaaattagctgggcgtggtggcaggtgcctgtaat-cccagcta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56718288 636 + 60714840 tgggaacatgactgtggatgttgagctggctgttgttgaaagcctggctgaagtagtAACTGTggccaggcaccgtggctcgtgcctgtaatcccagcactttgggaggccgggcgctgtggcttgtgcctgtat-atcccagcactttgggaggccgggtgccgtggctcacaccntgtaatcccagcactttgagaggccgagacgggcagatcacttaagcccaggagaccagcctaaggcaacatagtaagaccccatctgtac-aaaaaatcaaaaaattagctgggcatggtggcacccacctgtagtctcagctacttgagaggctgagatggtaggatcacttgagcctgggaggtcgaggctgcagtgagccgtgattatgccactgccctacagcctgggtgacagagtgaaaccctctctaaaataaataaataaa-----ttttaaaaagaaaaaaGAggctgggcactgtggttcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacctgaagtcaggagttcaagaccagcctgaccaacatggtgaaacctcatctctactaaaaatacaaaaattagctgggcgtggtagcgggtgcctgtaatccccagcta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103263262 574 - 106955855 TGGGAATATGACTGTGGATGTTGAGCTGGCTGTTGTTGAAAGCCTGGCTGAAGTAGTAACTGTggccacgcaccatggctcgtgcctgtaattccagcactttgggagCccgggcgctgtggctcacgcc-----------------------------------------------tgtaatcccagcactttgagaggccgagaggggcagatcacttaagcccaggagaccagcct-gggcaacatagtaagactccatctgtacaaaaaaatcaaaaaattagctgggcatggtggcacccac---------------cttgagaggctgagatggtaggatcacttgagcctgggaggtcaaggctgcagtgagccatgattatgccactgccct-cagcctgggtgacagagtgagaccctctctaaaataaataaataaat----ttttaaaaagaaaaaaGAggccgggcactgtggttcacacctgtaatcccagcactttgggaggctgtgacaggcggatcacctgaggtcagggattcaagaccagcctgaccaacatggcgaaacctcatctctactaaaaatacaaaaattagctgggcgtggtggcaggtgcctgtaat-cccagcta i nomLeu3.chr10 M 724 C 0 s macFas5.chr19 55675273 624 + 59248254 tgggaatatgactgttgatgctgaactggctgttgttgaaagcctggctgaagtagtgactgtgaccaggcaccgaggctcacgcctgtaatcccagcgctttgagaggccgggcgcagtggctcacgcc--tgtaatcccagcactttgggaggccgggtgc--------------agtaatcccagcgctttgagaggccaagacaggcggatcacttaagcccaggagaccagccg-aggcaacatagtaagaccccatctgtacaaaaaaaacaaaaaattagctgggcatggtggcacccacctgtagtctcagctacttgagaggctgagatggtaggatcacttgagcctgggaggtcgaggctgcagtgagccgcgattatgccactgccct-cagcctgggcgacagagtgagaccctctctaaaataaataaataaataaaattttaaaaagaaaaAAGAggctgggcactgtggttcacgcctgtaatcccagcactttgggaggctgaggcgggtggatcacctgaggtcagagattcaagaccagcctgaccaacatggtgaaacctcgtctctactaaaaatacaaaaattagctgggcatggtgggaggtgcctgtaat-cccagcta i macFas5.chr19 C 0 C 0 e calJac3.chr22 45860698 1362 + 49145316 I e chlSab2.chr6 47508769 849 + 50890351 I e papAnu2.chr19 47788564 1762 + 51301725 I e rheMac3.chr19 60547167 2957 + 64156825 I a score=138206.000000 s hg38.chr19_GL949747v2_alt 532739 106 + 729520 ctcgggaggctgaggcaggagactcacttgaacctcggaggtggaggttgcagtgagctgagatcgtgccactgcactgcagcctcagtgacagagcgagactcca s panTro4.chr19 59809085 106 + 63644993 ctcgggaggctgaggcaggagactcacttgaacctcggaggtggaggttgcagtgagctgagatcgtgccactgcaccgcagcctcagtgacagagcgagactcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56718924 106 + 60714840 ctcgggaggctgaagcaggagactcacttgaacctcagaggtggaggttgcagtgagccgagatcgtgccactgcactgcagcctcagtgacagagcgagactcca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103263836 106 - 106955855 ctcgggaggctgaggcaagagactcacttgaacctcggaggtggaggttgcagtgagatgagattgtgccactgcactgcagcctcagtgacagagtgagactcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60550124 106 + 64156825 ctcaggaggctgaggcaggagaatcacttgaacctcggaggtggaggttgtggtgagccaagattgtgccactgcactgcagcctcggtgacagatcgagactcca i rheMac3.chr19 I 2957 C 0 s macFas5.chr19 55675897 106 + 59248254 ctcaggaggctgaggcaggagaatcacttgaacctcggaggtggaggttgtggtgagccaagattgtgccactgcactgcagcctcggtgacagatcgagactcca i macFas5.chr19 C 0 C 0 e calJac3.chr22 45860698 1362 + 49145316 I e chlSab2.chr6 47508769 849 + 50890351 I e papAnu2.chr19 47788564 1762 + 51301725 I a score=56096.000000 s hg38.chr19_GL949747v2_alt 532845 39 + 729520 tctcaaaaaacaaTAATAggctgggcacagttgctcatg s panTro4.chr19 59809191 39 + 63644993 tctcaaaaaacaataaTAggctgggcacagtggctcatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56719030 39 + 60714840 tctcaaaaaacaaTAATAggccaggcgcagtggcacatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103263942 39 - 106955855 tctcaaaaaacaataaTAggccgggtgcagtggctcatg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60550230 39 + 64156825 tctcaaaaCACAATAATAggccgggtgcggtggctcacg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55676003 39 + 59248254 tctcaaaaCACAATAATAggccgggtgcggtggctcacg i macFas5.chr19 C 0 C 0 s calJac3.chr22 45862060 39 + 49145316 TTTTAAAAAGAAAATAGAggctgggcatggtggctcaca i calJac3.chr22 I 1362 C 0 e chlSab2.chr6 47508769 849 + 50890351 I e papAnu2.chr19 47788564 1762 + 51301725 I a score=514361.000000 s hg38.chr19_GL949747v2_alt 532884 234 + 729520 cctgtaatcccagcactttgggaggccaaggtgggcaaatcacctgaggtcaggagttcgagaccagcctgaccaacatggagagaccccgtctctactaaaaatacaaaaattagctgggcg-tggtggtacgcacctgtaatcccagtttctcgggaggctgaggcaggagaattgcttgaacccggg-agacggaggttgcagtgagctgagatcacgcca-ctgcact-ccagc s panTro4.chr19 59809230 234 + 63644993 cctgtaatcccagcactttgggaggccaaggtgggcagatcacctgaggtcaggagttcgagaccagcctgaccaacatggagagaccccgtctctactaaaaatacaaaaattagctgggcg-tggtggtacgcacctgtaatcccagtttctcgggaggctgaggcaggagaatcgcttgaacctggg-aggcggaggttgcagtgagctgagatcacgcca-ctgtact-ccagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56719069 238 + 60714840 cttgtaatcccagcactttgggaggccaaggtgggcagatcacctgaggtcaggagttcgagaccagcctgaccaacatggggagaccccatctctactaaaaatacaaaaattagctgggtgntggtggtacgcacctgtaatcccagcttctcgagaggctgaggcaggagaatcacttgaacccaggcnggcagagtttgcagtgagctgagatcgcgccacctgcactcccagc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103263981 234 - 106955855 cctgtaatcccagcactttgggaggccaaggtgggcagatcacctgaggtcaggagttcgagaccagcttgaccaacatggagagaccctgtctctactaaaaatacaaaaattagctgggca-tgttggtatgcacctgtaatcccagcttttcgggaggctgaggcaggagaatcgcttgaacccagg-aggcggaggttgcagtgagctgagatcgcgcca-ctgcact-ccagc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60550269 234 + 64156825 cctgtaatcccagcactttgggaggccaagatgggcagatcacttgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaattagctgggcg-tggtggtgcacacctgtaatcccagcttctcaggaggctgaggcaggagaatcacttgaacccagg-aggcagaggttgtagtgagccgagatcacacaa-ttgctct-ccagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55676042 234 + 59248254 cctgtaatcccagcactttgggaggccaagatgggcagatcacttgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaattagctgggcg-tggtggtgcacacctgtaatcccagcttctcaggaggctgaggcaggagaatcacttgaacccagg-aggcagaggttgtagtgagccgagatcacacaa-ttgctct-ccagc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47509618 234 + 50890351 cctgtaatcccagcactttgggaggctgaggtgggtgggtcacctgaggtcagggattcaagaccagcttgactaacacggtgaaacctcgtctctactaaaaatacaaaaattagctgggcg-tggtggcgggtgcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacccggg-aggcggaggttgcagtgagccgagatcacacaa-ttgctct-ccaac i chlSab2.chr6 I 849 C 0 s calJac3.chr22 45862099 234 + 49145316 tgtgtaatcccaacactttgggaggctgaggcaggtggatcacttgaggtgaagagttccagaccaacctggccaacatagtgaaaccccatctctactaaaaatacaaaaattacctgggcg-tggtggcacgtgcctgtgatcccagctactcaggaggctgaggcaggaacctcgtttgaacccagg-aggtggaggttgcggtgagccaaggtcgcgcca-ctgcatt-gcagc i calJac3.chr22 C 0 C 0 e papAnu2.chr19 47788564 1762 + 51301725 I a score=24297.000000 s hg38.chr19_GL949747v2_alt 533118 10 + 729520 ttggg-caata s panTro4.chr19 59809464 10 + 63644993 ttggg-caata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56719307 11 + 60714840 ttgggccaaca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103264215 10 - 106955855 ttggg-caaca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60550503 10 + 64156825 ttggg-caaca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55676276 10 + 59248254 ttggg-caaca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47790326 10 + 51301725 ttggg-caaca i papAnu2.chr19 I 1762 C 0 s chlSab2.chr6 47509852 10 + 50890351 ttggg-caaca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45862333 10 + 49145316 ctcgg-tgaca i calJac3.chr22 C 0 C 0 a score=1904887.000000 s hg38.chr19_GL949747v2_alt 533128 599 + 729520 agagcgaaactccatct-caaaaaa---atatataataataacaataataataagaagaaaAGAATAAAGGAGAAAAGGT-CTTTCTAATAGCTCACTCTTTTCTCTCTTAGGCTTGTATGGCAAACCC-TTCCTCTCTGCAGATCGGGGTCTGGTGTTGATGCCAGGAGAGAATATTTCCCTCACGTGCAGCTCAGCACACATCCCATTTGATAGATTTTCACTGGCCAAGGAGGGAGAACTTTCTCTGCCACAGCACCAAAGTGGGGAACACCCGGCCAACTTCTCTTTGGGTCCTGTGGACCTCAATGTCTCAGGGATCTACAGGTGCTACGGTTGGTACAACAGGAGC---CCCTACCTGTGGTCCTTCCCCAGTAATGCCTTGGAG-CTTGTG-GTCACAGGTAGGTACCGCCCAGTCCAGCCCTGTGTCTGGGTTGGCTGTCCAG--GGCCTTGCCACCGGGCAGGAATATGAAGAC-------GTGCACTGAGAGTGAAGTGAAGAGAGGCAAAGGCT---CTCACTCCAGGACAGTGGAGAGAGAAAGGCTTC--CCCACCAC-ACTTTCCGCTTTCACTTCCTCG-CTAGAGTTCTCCAGACAGGGTTCATTGAAAA s panTro4.chr19 59809474 599 + 63644993 agagcgaaactccatct-caaaaaa---aTATATGATAATAACAATAATAATAAGAAGAAAAGAATAAAGGAGAAAAGGT-CTTTCTAATAGCTCACTCTTTTCTCTCTTAGGCTTGTATGGCAAACCC-TTCCTCTCTGCGGATCGGGGTCTGGTATTGATGCCGGGAGAGAATATTTCCCTCACGTGCAGCTCAGCACACATCCCATTCGATAGATTTTCACTGGCCAAGGAGGGAGAACTTTCTCTGCCACAGCACCAAAGTGGGGAACACCCGGCCAACTTCTCTTTGGGTCCTGTGGACCTCAATGTCTCAGGGATCTACAGGTGCTACGGTTGGTACAACAGGAGC---CCCCACCTGTGGTCCTTCCCCAGTAATGCCCTGGAG-CTTGTG-GTCACAGGTAGGTACCGCCCAGTCCAGCCCTGTGTCTGGGTTGGCTGTCCAG--GGCCTTGCCACCGGGCAGGAATATGAAGAC-------GTGCACTGACAGTGAAGTGAAGAGAGGCAAAGGCT---CTCACTCCAGGACAGTGGAGAGAGAAAGGCTTC--CCCACCAC-ACTTTCCGCTTTCACTTCCTCG-CTAGAGTTCTCCAGACAGGGTTCATTGAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56719318 619 + 60714840 agagcgaaactccttctccaaaaaa---aTATATAATAATAACAATAAGAAGAAGAAGAAAAGAATAAAGGAGAAAAGGTCCTTTCTAATAGCTCACTCTTTTCTCTCTTAGGCTTGTATGGCAAACCCATTCCTCTCTGCGGATCGGGGTCTGGTGTTGATGCCAGGAGAGAATATTTCCCTCACGTGCAGCTCAGCACACATCCCATTTGATAGATTTTCACTGGCCAAGGAGGGAGAACTTTCTCTGCCACAGCACCAAAGTGGGGAACACCCGGCCAACTTCTCTTTGGGTCCTGTGGACCTCAACGTCTCAGGGATCTACAGGTGCTATGGTTGGTACAACAGGAGCCAACCCTACCTGTGGTCCTTCCCCAGTAACGCCCTGGAGCCTTGTGTGTCACAGGTAGGTACCGCCCAGTCCAGCCCTGTGTCTGGGTTGGCTGTCCAGAAGGCCTTGCCGCTGGGCAGGAATATGAAGAATGAAGAGGTGCACTGAGAGTGAGGTGAAGAGAGGCAAAGACCTCACTCACCCCAGGACAGTGGAGAGAGAAAGGCTTC--CCCACCAC-ACTTTCCACTTTCACTACCTCG-CTAGAGTTCTCCAGACAGTGTTCATTGAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103264225 598 - 106955855 agagcgaaactccgtct-caaaaaa---atat---ataataacaataagaagaaGAAGAAAAGAATAAAGGAGAAAAGGT-CTTGCTAATAGCTCACTCTTTTCTCCCTTAGGCTTGTATGGCAAACCC-TTCCTCTCTGCGGATCGGGGTCTGGTGTTGATGCCGGGAGAGAATATTTCCCTCACGTGCAGCTCAGCACACATCCCATTTGATAGATTTTCACTGGCCAAGGAGGGAGAACTTTCTCTGCCACGGCACCAAAGTGGGGAACACCCGGCCAACTTCTCTTTGGGTCCTGTGGGCCTCAATGTCTCAGGGATTTACAGGTGCTACGGTTGGCACCACAGGAGC---CCCTACCTGTGGTCCTTCCCCAGTAACGCCCTGGAG-CTTGCG-GTCACAGGTAGGTACCGCCCAGTCCAGCCCTGTGTCTGGGTTGGCTGTCCAG--GGCCTTGTCACTGGGCAGGAATAGGAAGAG-------GTGCACTGAGAGTAAAGTGAAGAGAGGCAAAGACT-CACCCACTCCAGGACAGGGGAGAGAGAACGGCTTC--CCCACCAC-GCTTTCCACGTTCACTTCCTCG-CTAGAGCTCTACAGACAGTGTTCATTGAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60550513 607 + 64156825 agagcaaagctccgtct-caaaaaaT--ATATATAATAATAGCAATAATCAGAAGAAGAAAAAAATAAAGGAGAAAAGGT-CTTGCTAACAGCTCACTCTTCTCTCTCTTAGGCTTGTATGGCAAACCT-TCCCTCTCTGTGGATCGGGGTCCAGTGTTGATGCCGGGAGAGAATATTTCCGTCACGTGCAGCTCAGCACACATCCCATTTGATAGATTTTCACTGGCCAAGGAGGGAGAACTTTCTCTGCCACAGCACCAAAGTGGGGAACACCCGGCCAACTTCTCTCTGGGTCCTGTGGACCTCAATGTCTCAGGGAGCTACAGGTGCTACGGCTGGTACAACAGGAGT---CCCTACCTGTGGTCCTTCCCCAGTAATGCCCTGGAG-CTTGTG-GTCACAGGTAGGTACCTCCCCATCCAGCCCTGTGTCCAGGTTGGCTGTCCAG--GCCCTTGTCACTGGGCAGGAATATGAATAT-GAAGAGGTGCACTGAGAATAATGTGAAGAGAGGCAAAGACT-CACCCACTCCAGGACAGTGGAGAAAGAAAGTCTT---CCCATCAC-ACTTTCCACCTTCACTTCCTCG-CTAGAGTTCTCCAGACAGTGTTCATTGAAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55676286 607 + 59248254 agagcaaagctccgtct-caaaaaat--acatataataatagcaataatcagaagaagaaaaaaataaAGGAGAAAAGGT-CTTGCTAACAGCTCACTCTTCTCTCTCTTAGGCTTGTATGGCAAACCT-TCCCTCTCTGTGGATCGGGGTCCAGTGTTGATGCCGGGAGAGAATATTTCCGTCACGTGCAGCTCAGCACACATCCCATTTGATAGATTTTCACTGGCCAAGGAGGGAGAACTTTCTCTGCCACAGCACCAAAGTGGGGAACACCCGGCCAACTTCTCTCTGGGTCCTGTGGACCTCAATGTCTCAGGGAGCTACAGGTGCTACGGCTGGTACAACAGGAGC---CCCTACCTGTGGTCCTTCCCCAGTAATGCCCTGGAG-CTTGTG-GTCACAGGTAGGTACCTCCCCGTCCAGCCCTGTGTCCGGGTTGGCTGTCCAG--GCCCTTGTCACTGGGCAGGAATATGAATAT-GAAGAGGTGCACTGAGAATAATGTGAAGAGAGGCAAAGACT-CACCCACTCCAGGACAGTGGAGAAAGAAAGTCTT---CCCATCAC-ACTTTCCACCTTCACTTCCTCG-CTAGAGTTCTCCAGACAGTGTTCATTGAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47790336 606 + 51301725 agagcaaaactccgtct-caaaaaat--atatataataatagcaataatcagaagaagaaaaaaataaaggagaaaa-gt-ctTGCTAACagctcactcttctctctcttagGCTTGTATGGCAAACCT-TCCCTCTCTGCGGATCGGGGTCCGGTGTTGATGCCGGGAGAGAATATTTCCGTCACGTGCAGCTCAGCACACATCCCATTTGATAGATTTTCACTGGCCAAGGAGGGAGAACTTTCTCTCCCACAGCACCAAAGTGGGGAACACCCGGCCAACTTCTCTCTGGGTCCTGTGGACCTCAATGTCTCAGGGAGCTACAGGTGCTACGGCTGGTACAACAGGAGC---CCCTACCTGTGGTCCTTCCCCAGTAATGCCCTGAAG-CTTGTG-GTCACAGGTAGGTACCTCGCCGTCCAGCCCTGTGTCCGGGTTGGCTGTCCAG--GGCCTTGTCACTGGGCAGGAATATGAATAT-GAAGAGGTGCACTGAGAATAATGTGAAGAGAGGCAAAGACT-CACCCACTCCAGGACAGTGGAGAAAGAAAGTCTT---CCCATCAC-ACTTTCCACCTTCACTTCCTCG-CTAGAGTTCTCCAGACAGCGTTCATTGAAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47509862 608 + 50890351 agagcaaaactccgtct-caaaaaat--atatataataatagcaataatcagaagaagaagaaaataaAGGAGAAAAGGT-CTTGCTAATAGCTCACTCTTTTCTCTCTTAGGCTTGTATGGCAAACCC-TCCCTCTCTGCGGATCGGGGTCCGGTGTTGATGCCGGGAGAGAATATTTCCGTCACGTGCAGCTCAGCACACATCCCATTTGATAGATTTTCACTGGCCAAGGAGGGAGAACTTTCTCTGCCACAGCACCAAAGTGCGGAACACCCGGCCAACTTCACTCTGGGTCCTGTGGACCTCAATGTCTCAGGGAGCTACAGGTGCTACGGTTGGTACAACAGGAGC---CCCTACCTGTGGTCCTTCCCCAGTAATGCCCTGGAG-CTTGTG-GTCACAGGTAGGTACCTCCCCATCCAGCCCTGTGTCCGGGTTGGCTGTCCAG--GGCCTTGTCACTGGGCAGGAATAGGAATAT-GAAGAAGTGCACTGAGAATAATGCGAAGAGAGGCAAAGACT-CACCCACTCCAGGAGAGTGGAGAGAGAAAGGCTTC--CCCATCAC-ACTTTCCACCTTCACTTCCTCG-CTAGAGTTCTCCAGACAGTGTTCATTGAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45862343 582 + 49145316 a-agcaagactccatct-cagaaaa--------taataataa-------------ataaaaagagtaaaGGAGAGACGTT-CTTGCTAACATCTCACTCCTTTCTCTCGTAGGCTTGTATGACAAACCC-TTCCTCTCTGCAGATCGGGGTCGTGTGGTGAGGCCGGGAGAGAATATCTCCTTCACGTGCAGCTCGGCACACCTCCCATTTGATAGATTTTCACTGGCCAAGGAGGGAGAACTTTCTCTGCCACAGCACCAAAGTGGGGAACACCCGGCCAGCTTCCCTCTGGGTCCTCTGGACCTCAACGTCTCAGGGAGCTACAGGTGCTACGGTTGGTACAGCAGCAGC---CCCTACGTGTGGTCCGCCCCCAGTAATGCCCTGGAG-CTCGTG-GTCACAGGTAGGTACCTCCCAGGACAGCCCCGTGTCTGGGTTGGCTGTCCAG--GGCTATGTCACTGGGCAGGGATCTGAAGAG-------GTGCACTCAGAGTAAAGTGAAGAGAAGCAGAGACT-CGCTCACTCCAGGATGGTGGGGGGGGGGGGGCTTC--CCCGGCTCTATGCTCGACTTTCACTTTCTCG-CTAGA-TTTTCCAGTCTGTGTTCCTTGAAAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19966410 572 - 122678785 -aaatcgaacttcaatt-taaaaaataaaAAGAAAAGGGTGGGGGTGATGATAACAGGG-------AAAGGAAGAAAAAC-CTTGCTAATAGCTTACTCTCTTCTCTTTTAGGTTTCTACGACAAACCC-TTCCTCTCTGCTGCCCAGAGCGCCTTGGTGAAGCTAGGGGAGAAGATCTCATTACAGTGAAATTCAGCACACATCCCACTTGATATATTTTCACTGACCAGGGAAGGAGGATCCACCCTTTCATAAC-CCAAAATGGGGAACATCAAGGCACCTTTATTCTAGGTCCTGTGAACCAAAGCTTCTCAGGGAACTACAGGTGCTATGATTGGCACAGTGGCAGC---CCTTATGTGTGGTCAG-CCCTAGTGATGCCCTGCAG-CTTGTG-GTCACAGGTAGGTGCACCCCAACCCAGCCCTGTGTCC---TT--CTCCTCAG--GGCCTTCACATCCAGCAGGAATGCAAAGAG-------ATGCACTGAGAAAGAACAGTGGGGCAGTAGAGACT---------------------GCAAAGAAAGACTTTCATCCACACC-CCATTCAACTTCCACATCCTCTCCTAGAGTTCTCCAGACAGTGCCTTTTAAAAA i canFam3.chr1 N 0 I 1659 a score=420409.000000 s hg38.chr19_GL949747v2_alt 533727 184 + 729520 CTTA--GTCTGTGGAGAACAGAAGGGCTAAC----------------------TCAGTTTGTTTCAtttta---------------------tttatttcattttattttccgggatagagtcttgctctttcgccaaggctggagtgcagtggcacgatctcgactcactgcaaccttcgcctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgg- s panTro4.chr19 59810073 186 + 63644993 CTTACGGTCTATGGAGAACAGAAGGGCTAAC----------------------TCAGTTTGtttcatttta---------------------tttattttattttattttccgggatggagtcttgctctttcgccaaggctggagtgcagtggcacgatctcgactcactgcaaccttcgcctcccaggttcaagcaattctcctgcctcagcctgctgagtagctgg- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56719937 229 + 60714840 CTTACGGTCTATGGAGAACAGAAGGGCTAACtattttattattttattttattttattttattttattttactttactttactttactttactttattttattttattttctgggatggagtcctgctctttcgccaaggctggagtgcagtgaccggatctcgactcactgcaaccttcgcctcccgggttcacgcaattctcctgcctcagcctcctgagtagctgg- i ponAbe2.chr19 C 0 I 1535 s nomLeu3.chr10 103264823 193 - 106955855 CTTCTGGTCTATGGAGAAAAGAAGGGCTAAC----------------------TCattttgttttattttattttata--------------ttttattaattATAttttccgggatggagtcttgctcattccccaaggctggagtgcagtggcaccatctcgactcactgcaaccctcacctcctgggttcaagcaattctcctgcctcagcctcctgagtagctgg- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60551120 172 + 64156825 CTTGTGGTCTATGGAGAAAAGAAGGACTGAC----------------------TCat-----------------------------------tttattttattttattttctgtgatggagtcttgttctgtcgccaaggctggagtgcagtggcgcgatctcggctcactgcaagcttcgcctcccgggttcaagcagttctcctgcctcagcctcctgagtagctgg- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55676893 172 + 59248254 CTTGTGGTTTATGGAGAAAAGAAGGACTGAC----------------------TCAt-----------------------------------tttattttattttattttctgtgatggagtcttgttctgtcgccaaggctggagtgcagtggcgcgatctcggctcactgcaagcttcgcctcccaggttcaagcagttctcctgcctcagcctcctgagtagctgg- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47790942 171 + 51301725 CTTGTGGTCTATGGAGAAAAGAAGGACTGAc----------------------tcat-----------------------------------tttattatatgttattttctgtgatggagtcttgctctgtcgccaaggctggagtgcagtggcacgatctcggctcactgcaagcttcgcctcccgggttcaagcagttctaat-cctcagcctcctgagtagctgg- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47510470 169 + 50890351 CTTGTGGTCTATGGAGAA---AAGGACTAAC----------------------TCAt-----------------------------------tttattttattttatttcctgtgatggagtcttgctctgtcgccaaggctggagtgcagtggcacgatctcggctcactgcaaccttcgcctcccgggttcaagcagttctcctgcctcagcctactgagtagctgg- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45862925 162 + 49145316 CATGTGGTCTATCGAGAAAAGAAGAGCTAAC-------------------------------------------------------------CTTGCCttctttt-------gagatggagtctcacctcatggcccacgctggagtgcaggggcacaatctcggctcactgcaacctccgcctcccgggttcaagggatcctcctacctcagcctcccgagtagcttga i calJac3.chr22 C 0 C 0 e canFam3.chr1 19966982 1659 - 122678785 I a score=227976.000000 s hg38.chr19_GL949747v2_alt 533911 118 + 729520 gaccacac--------------------------------------------agacagggtttcaccatgttggccaggctggtctcgaactcccgacctcaggtgatccacctgcctcggcctcccaaagtgctggga--ttacaggcgtgagccaccgcgcc s panTro4.chr19 59810259 118 + 63644993 gaccacac--------------------------------------------agtcaggatttcaccatgttggccgggctggtctcgaactcccgacctcaggtgatccacctgcctcggcctcccaaagtgctggga--ttacaggcgtgagccaccgcgcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103265016 116 - 106955855 gaccacac--------------------------------------------agacagggtttcaccatattggccaggctggtcttgaattcccgacctt--gtgatccatccgcctcagcctcccaaagtgctggga--ttacaggcgtgagccaccgcgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60551292 116 + 64156825 gaccatgc--------------------------------------------agacagggtttcgccatgttgttcaggctggtctcgatctcatgacctt--gtgatccacccacctcagcttcccaaagagctggaa--ttacaggcgtgagccaccgtgcc i rheMac3.chr19 C 0 I 729 s macFas5.chr19 55677065 116 + 59248254 gatcatgc--------------------------------------------agacagagtttcaccatgttgttcaggctggtctcgatctcatgacctt--gtgatccacccacctcagcttcccaaagtgctggaa--ttacaggcgtgagccaccgtgcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47791113 116 + 51301725 gaccatag--------------------------------------------agacagggtttcaccatgttgttcaggctggtctcgatctcatgacctt--gtgatccacctgcctcagcctcccaaagtgctggga--ctacaggcatgagccaccgtgcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47510639 116 + 50890351 gaccatgc--------------------------------------------aggcagggtttcaccatgttggtcaggctggtctcgatctcatgacctt--gtgatccacccacctcagcttcccaaagtgctggaa--ttacaggcgtgagccaccgtgcc i chlSab2.chr6 C 0 I 725 s calJac3.chr22 45863087 164 + 49145316 gattacaggtgtctgcctccaggcctggctaattttttagtatttttagagaagacagggtttcagcatgttgggcagacaggtgttgaactcctgacctcaggtgatccacccgcctcagcctcccaaagtgctggggttttacaagcatgagtcaccactgc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19966982 1659 - 122678785 I e ponAbe2.chr19 56720166 1535 + 60714840 I a score=6096.000000 s hg38.chr19_GL949747v2_alt 534029 6 + 729520 tggccA s panTro4.chr19 59810377 6 + 63644993 cggccA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103265132 6 - 106955855 cggccA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55677181 6 + 59248254 cagtcA i macFas5.chr19 C 0 I 713 s papAnu2.chr19 47791229 6 + 51301725 cagcca i papAnu2.chr19 C 0 I 715 s calJac3.chr22 45863251 6 + 49145316 tggccA i calJac3.chr22 C 0 I 308 e canFam3.chr1 19966982 1659 - 122678785 I e ponAbe2.chr19 56720166 1535 + 60714840 I e chlSab2.chr6 47510755 725 + 50890351 I e rheMac3.chr19 60551408 729 + 64156825 I a score=422.000000 s hg38.chr19_GL949747v2_alt 534035 1 + 729520 G s panTro4.chr19 59810383 1 + 63644993 A i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103265138 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55677900 1 + 59248254 A i macFas5.chr19 I 713 C 0 s papAnu2.chr19 47791950 1 + 51301725 A i papAnu2.chr19 I 715 C 0 e canFam3.chr1 19966982 1659 - 122678785 I e ponAbe2.chr19 56720166 1535 + 60714840 I e calJac3.chr22 45863257 308 + 49145316 I e chlSab2.chr6 47510755 725 + 50890351 I e rheMac3.chr19 60551408 729 + 64156825 I a score=1500.000000 s hg38.chr19_GL949747v2_alt 534036 1 + 729520 G s panTro4.chr19 59810384 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56721701 1 + 60714840 G i ponAbe2.chr19 I 1535 C 0 s nomLeu3.chr10 103265139 1 - 106955855 G i nomLeu3.chr10 C 0 T 40006 s macFas5.chr19 55677901 1 + 59248254 G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47791951 1 + 51301725 G i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19966982 1659 - 122678785 I e calJac3.chr22 45863257 308 + 49145316 I e chlSab2.chr6 47510755 725 + 50890351 I e rheMac3.chr19 60551408 729 + 64156825 I a score=5222.000000 s hg38.chr19_GL949747v2_alt 534037 8 + 729520 CTGCACAC s panTro4.chr19 59810385 8 + 63644993 CTGCAGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56721702 8 + 60714840 CTGCAGAT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55677902 8 + 59248254 CTACAGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47791952 8 + 51301725 CTACAGAT i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19966982 1659 - 122678785 I e calJac3.chr22 45863257 308 + 49145316 I e nomLeu3.chr10 103265140 40006 - 106955855 T e chlSab2.chr6 47510755 725 + 50890351 I e rheMac3.chr19 60551408 729 + 64156825 I a score=11160.000000 s hg38.chr19_GL949747v2_alt 534045 7 + 729520 ATTCTTA s panTro4.chr19 59810393 7 + 63644993 ATTCTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56721710 7 + 60714840 ATTCTTA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60552137 7 + 64156825 ATTCTGA i rheMac3.chr19 I 729 C 0 s macFas5.chr19 55677910 7 + 59248254 ATTCTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47791960 7 + 51301725 ATTCTGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47511480 7 + 50890351 ATTCTGA i chlSab2.chr6 I 725 C 0 e canFam3.chr1 19966982 1659 - 122678785 I e calJac3.chr22 45863257 308 + 49145316 I e nomLeu3.chr10 103265140 40006 - 106955855 T a score=170396.000000 s hg38.chr19_GL949747v2_alt 534052 81 + 729520 TTAGGATTCCACCTTGTTCTGG---TGTTGTAGAGATGTGATTAGGTATTTAGTGAATTCACCAAGTGAGGAGAGAATGAAAAG s panTro4.chr19 59810400 81 + 63644993 CTAGGATTCCACCTTGTTCTGG---TGTTGTAGAGATATGATTAGGTATTTAGTGAATTCACCAAGTGAGGAGAGAATGAAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56721717 84 + 60714840 TTAGGATTCCACCTTGTTCTGGTGTTGTTGTAGAGATATGATTAGGTATTTAGTGAATTCACCAAGTGAGGAGAGAATGAAAAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60552144 84 + 64156825 TTAGGATTCCACCTAGTTCTGGTGGTGGTGTAGAGATATGATTAGATATTTAGTGAAATCACCAAGTGAGGAGAGAATGAAAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55677917 84 + 59248254 TTAGGATTCCACCTAGTTCTGGTGGTGGCGTAGAGATATGATTAGATATTTAGTGAAATCACCAAGTGAGGAGAGAATGAAAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47791967 84 + 51301725 TTAGGATTCCACCTTGTTCTGGTGGTGGTGTAGAGATATGATTAGATATTTAGTGAAATCACCAAGTgaggagagaatgaaaag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47511487 84 + 50890351 TTAGGATTCCACCTTGTTCTGGTGGTGGTGTAGAGATATGATTACATATTTAGTGAAATCACCAAGTGAGGAGAGAATGAAaag i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19968641 82 - 122678785 TTAGGGTTCTGAATA--TGTGGAGGTGTTGTAAGGATATGACTAGACTTTCAGGGAAATCACCACATAAAGAGGGAATGAAAAG i canFam3.chr1 I 1659 C 0 e calJac3.chr22 45863257 308 + 49145316 I e nomLeu3.chr10 103265140 40006 - 106955855 T a score=289243.000000 s hg38.chr19_GL949747v2_alt 534133 159 + 729520 AAAACACAACctgcctggccgggcgtggtggcgtgagcctgtcgtcccagctactcaggaggctgaggcaggagaatcacttgaacccaggaggcagctgttgcagtgagccaagatcacgccattgcactccagcctgggtgacagaacgagactcca s panTro4.chr19 59810481 159 + 63644993 AAAACACAACCTGCCTGgccgggcgtggtggcgtgagcctgtcgtcccagctactcaggaggctgaggcaggagaatcacttgaacccaggaggcggctgttgcagtgagccaagatcacgccattgcactccagcctgggtgacagaacgagactcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56721801 158 + 60714840 AAAACACAACCTGCCTGgccgggcatggtggcgtgagcctgtggtcccagctactcaggaggctgaggcaggagaatcacttgaacccaggaggcggccg-tgcagtgagccaagatcacgccattgcactccagcctgggtgacagaacgagactcca i ponAbe2.chr19 C 0 M 180 s rheMac3.chr19 60552228 159 + 64156825 AAAACACAACTTGCCTggccgggtgtggtggcgtgagcctgtggtcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcgttggttgcactgagccaagattgcgccattgcactccagcctgggtgacagaacgagactcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55678001 159 + 59248254 AAAACACAACTTGCCTGgccgggtgtggtggcgtgagcctgtggtcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcgttggttgcactgagccaagattgcgccattgcactccagcctgggtgacagaacgagactcca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47792051 159 + 51301725 aaaacacaacttgcctggccgggtgtggtggcgtgagcctgtggtcccagctactcaggaggctgaggcaggagaatcacttgaacccaggaggcgttggttgcactgagccaagattgcgccattgcactccagcctgggtgacagaacgagactcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47511571 155 + 50890351 aaaacataa----cctggccaggcgaggtggcgtgagcctgtggtcccagctactcaggaggctgaggcaggagaatcacttgaacccaggaggtgttggttgcactgagccaagatcacgccattgcactccagcctgggtgacagaacgagactcca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19968723 0 - 122678785 C e calJac3.chr22 45863257 308 + 49145316 I e nomLeu3.chr10 103265140 40006 - 106955855 T a score=6128.000000 s hg38.chr19_GL949747v2_alt 534292 5 + 729520 cctca s panTro4.chr19 59810640 5 + 63644993 cctca i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60552387 5 + 64156825 tctca i rheMac3.chr19 C 0 M 67 s macFas5.chr19 55678160 5 + 59248254 tctca i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47792210 5 + 51301725 tctca i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 47511726 5 + 50890351 tctca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19968723 0 - 122678785 C e ponAbe2.chr19 56721959 180 + 60714840 M e calJac3.chr22 45863257 308 + 49145316 I e nomLeu3.chr10 103265140 40006 - 106955855 T a score=-1781.000000 s hg38.chr19_GL949747v2_alt 534297 2 + 729520 -ag s panTro4.chr19 59810645 2 + 63644993 -ag i panTro4.chr19 C 0 C 0 s macFas5.chr19 55678166 2 + 59248254 ga- i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47792219 2 + 51301725 aa- i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 47511731 1 + 50890351 -a- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19968723 0 - 122678785 C e ponAbe2.chr19 56721959 180 + 60714840 M e calJac3.chr22 45863257 308 + 49145316 I e nomLeu3.chr10 103265140 40006 - 106955855 T e rheMac3.chr19 60552392 67 + 64156825 M a score=215166.000000 s hg38.chr19_GL949747v2_alt 534299 173 + 729520 aaaaaaaAAAAAAA-CACggctgggcacgatggctcacgcctgtaatctgagcacattgggaggctgaggcaggtggatcacctgaggtcgggagtttgagaccagcctggccaacatagtgaaaccccatctccactaaaaatacaaaaattaaccaggcgtggtggtggtgg s panTro4.chr19 59810647 174 + 63644993 aaaaaaaaaaaaaaaCACggctggccacgatggctcacgcctgtaatctgagcacattgggaggctgaggcaggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctccactaaaaatacaaaaattaaccaggcatggtggtggtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56722141 173 + 60714840 AAAAAAAAAAAAAA-TACggctgggcacgatggctcacacctgtaatctgagctcattgggaggccgaggcaggtggatcacctgaggtcgggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggtggtgg i ponAbe2.chr19 M 180 C 0 s macFas5.chr19 55678168 170 + 59248254 aaaaaaaaaaaaaa-CATggctgggcacggtggctcacgcctgtaatcccagcacattgggaggccgagacgggcggatcacttgaggtcgggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcatggtggcgg--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47792221 170 + 51301725 aaaaaaaaaaaaaa-catggctgggcacggtggctcacgcctgtaatcccagcacattgggaggccgagacgggtggatcacttgaggtcgggagttcgagaccagcctggccaacatggtgaaaccccatctttactaaaaatacaaaaattagccaggcgtggtggcag--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47511732 170 + 50890351 gaaaaaaaaaaaaa-CATggctgggcacagtggctcacgcctgtaatcccagcacattgggaggccgaggtgggtggatcacctgaggtcgggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggcgg--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19968723 0 - 122678785 C e calJac3.chr22 45863257 308 + 49145316 I e nomLeu3.chr10 103265140 40006 - 106955855 T e rheMac3.chr19 60552392 67 + 64156825 M a score=174411.000000 s hg38.chr19_GL949747v2_alt 534472 96 + 729520 gcgcctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaccagggaggcggaggttgcagtgagccgagatcacgccactgcact s panTro4.chr19 59810821 96 + 63644993 gcgcctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaccagggaggcggaggttgcagtgagccgagatcgcgccactgcact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56722314 96 + 60714840 gcgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaccagggaggtagaggttgcagtgagccgagatcgcgccacagccct i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60552459 96 + 64156825 gcgcctgtaatcccagctacttgggaggctgaggcaggagaatcgtttgaccaaggaggtggaggtagtagtgagccgagatcgcgccactgcact i rheMac3.chr19 M 67 C 0 s macFas5.chr19 55678338 96 + 59248254 gcgcctgtaatcccagctacttgggaggctgaggcaggagaatcgtttgaccaaggaggtggaggtagtagtgagccgagatcgcgccactgcact i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47792391 96 + 51301725 gcgcctgtaatcccagctacttgggaggctgaggcaggagaattgtttgaccagggaggtggaggtagttgtgagccgagatcgcgccactgcact i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47511902 96 + 50890351 gcgcctgtaatcccagctgcttgggaggctgaggcaggagaattgtttgaccggggaggtggaggtagttgtgagctgagatcgcgccactgcact i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19968723 0 - 122678785 C e calJac3.chr22 45863257 308 + 49145316 I e nomLeu3.chr10 103265140 40006 - 106955855 T a score=83693.000000 s hg38.chr19_GL949747v2_alt 534568 53 + 729520 ccagcctgggcaacagagtgagactccatctcaaaaaaaaaaaaaaaaaaaaa s panTro4.chr19 59810917 46 + 63644993 ccagcctgggcaacagagtgagactccatgtcaaaaaaaaaaaaaa------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56722410 48 + 60714840 ccagcctgggcaacagagtgagactccatcccaaaacaaaaaagaaaa----- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60552555 48 + 64156825 ccagcctgggcgacagaacaagactccgtctccaaaaaaaaaaaaaaa----- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55678434 48 + 59248254 ccagcctgggcgacagaacaagactccgtctccaaaaaaaaaaaaaaa----- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47792487 46 + 51301725 ccagcctgggcgacagaacaagactccgtctcc--aaaaaaaaaaaaa----- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47511998 53 + 50890351 ccagcctgggcgacagaacaagactccgtctcaaaaaaaaaaaaaaaaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45863565 53 + 49145316 ccagcctgaccaacatggtgaaaccctgtcttaaaaaaagaaagaaaggaaag i calJac3.chr22 I 308 C 0 e canFam3.chr1 19968723 0 - 122678785 C e nomLeu3.chr10 103265140 40006 - 106955855 T a score=561758.000000 s hg38.chr19_GL949747v2_alt 534621 249 + 729520 C---------ACACACAACCTGCCCATAATCACCTCCTTCCCAGTTTATAGCACTTCCCTGGGAAGCACAGTTCCTTGCCCGTGAACACAGTCTTGCTGACTGATCAGTGTGGTGCTGGCGAA-GCATGAGCTCATTGAGGGGATGCTTGAGGGAGTCCCATTTTGGCAAGCGAAAAGGAAAATGAGCTCCCGTTTCAGGGCTCTGGGGTTGGGATGGAATGGAACACAACCACCAACCATTCATCTCC-TTGAATTGTG s panTro4.chr19 59810963 245 + 63644993 -------------CACAACCTGCCCATAATCACCTCCTTCCCAGTTTATAGCACTTCCCTGGGAAGCACAGTTCCTTGCCCGTGAACACAGTCTTGCTGACTGATCAGTGTGGTGCTGGCGAA-GCATGAGCTCATTGAGGGGATGCTTGAGGGAGTCCCATTTTGGCAAGCGCATAGGGAAATGAGCTCCCGTTTCAGGGCTCTGGGGTTGGGATGGAATGGAACACAACCACCAACCATGCATCTCC-TTGAATTGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56722458 245 + 60714840 -------------CACAACATGCCCATAATCACCTCCTTCCCAGTTTATAGAACTTCCCTGGGAAACACAGTTCCTTGCCCATGGACACAGTCTTGCTGACGGATCAGTGTGGTGCTAGCGAA-GCATGAGCTCATTGAGGGGATGCCTGAGGGAGTCCCATTTTGGCAAGCGAATAGGGAAATGAGCTCCCATTTTAGGGCTCTGGGGTTGGGATGGAATGGAACACAACCACCAACCATTCATCTCC-TTGAATTGTG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60552603 227 + 64156825 --------------acaaCCTGCCCGTAATCACCCCCTTCCCAGTTTATGGAACTTCCC-----------------TGCCTGTGGACACAGTCCTGCTGACTGATCAATGTGGTGCTTGCAAA-GTGTGAGCCCATCGAGGAGATGCCTGAGGGAGTCACATTTTGGCAAGCGAATAGGGAAATGGGCTCCCGTTTCAGGGCTCTGGGGTTGGGATGGAATGGAACACACCCGCCAACCATTCATCTCC-CCGAATTGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55678482 227 + 59248254 --------------acaaCCTGCCCGTAATCACTCCCTTCCCAGTTTATGGAACTTCCC-----------------TGCCTGTGGACACAGTCCTGCTGACTGATCAATGTGGTGCTTGCAAA-GTGTGAGCCCATCGAGGAGATGCCTGAGGGAGTCACATTTTGGCAAGCGAATAGGGAAATGGGCTCCCGTTTCAGGGCTCTGGGGTTGGGATGGAATGGAACACACCCGCCAACCATTCATCTCC-CCGAATTGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47792533 227 + 51301725 --------------acaacctgccCGTAATCACCTCCTTCCCAGTTTATGGAACTTCCC-----------------TGCCCGTGGACACAGTCTTGGTGACTGATCAATGTGGTGCTTGCAAA-GTGTGAGCCCATTGAGGAGATGCCTGAGGGAGTCACATTTTGGCAAGCGAATAGGGAAATGGGCTCCCGTTTCAGGGCTCTGGGGTTGGGATGGAATGAAACACACCCGCCAACCATTCATCTCC-CCGAATTGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47512051 229 + 50890351 C------------CACAACCTGCCCGTAATCACCTCCTTCCCAGTTTATGGAACTTCCC-----------------TGCCCGTGGACACAGTCTTGCTGACTGATCAATGTGGTGCTTACAAA-GTGTGAGCCCATCAAGGAGATGCCTGAGGGAGTCACATTTTGGCAAGCGAATAGGGAAATGGGCTCCCGTTTCAGGGCTCTGGGGTTGGGATGGAATGAAACACACCCGCCAACCATTCATCTCC-CCGAATTGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45863618 257 + 49145316 aaaagaaagaaaaCACAACCTGCCCACGATCACCTCCTTCCCAGTTTATAG-ACCTCCTTGGAAACCAAAGTTCCTTGCCCATGAACACAGTCTTGGTGACTGATCAGCGTGGTGCTTGTGAA-GTGTGAGCTCACTGGGGAGATGTCTGAGGGAGTCACATTTTGGCAAACAAATACGGAAATGAGCTCCCATGTCAGGGCTCTGGGGTTTGGATGGAATGGAACACAGCCGCCAACCATTCATCTCC-TTCGATTATG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19968723 217 - 122678785 ---------CAAATACAACATTCACATGATCACCTCCTTTGCAGTTCACAAGACTCCCC---------------------CTTGGACCCAGGCTCAAAGATTA---AGTATGGTGCTCATGAATGCATAAGCTTGTTGAG---------GAGGGGTTCTGACTGTAATCA-CAAATAGGGAAATGAGTTCCCCTTTCAGGGCTCTGGGGTTGGGATGAAATGGAACATGACCAGTGATTGCTCATCTCCTTTGAATTATG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103265140 40006 - 106955855 T a score=236420.000000 s hg38.chr19_GL949747v2_alt 534870 78 + 729520 TCTCCAGACTCCATCCACCAAGATTACACGACGCAGAACTTGATCCGCATGGCCGTGGCAGGACTGGTCCTCGTGGCT s panTro4.chr19 59811208 78 + 63644993 TCTCCAGACTCCATCCACCAAGATTACACGATACAGAACTTGATCCGCATGGCCATGGCAGGACTGGTCCTCGTGGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56722703 78 + 60714840 TCTCCAGACTCCATAAACCAAGATTACACGATGCAGAACTTGATCCGCATGGCCGTGGCAGGACTGGTCCTCGTGGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103225134 78 - 106955855 TCCCCAGCCTCACACCCTCAGGATTACACAGTGGAGAATCTCATCCGCATGGCCGTGGCTGGCTTGGTCCTGGTGGTC i nomLeu3.chr10 T 40006 I 42041 s rheMac3.chr19 60552830 78 + 64156825 TCTCCAGACTCCATAAACCGAGATTACACGACGCAGAACTTGATCCGCATGGCCATGGCAGGACTGGTCCTCGTGGCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55678709 78 + 59248254 TCTCCAGACTCCATAAACCGAGATTACACGACGCAGAACTTGATCCGCATGGCCATGGCAGGACTGGTCCTCGTGGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47792760 78 + 51301725 TCTCCAGACTCCATAAACCAAGATTACACGACGCAGAACTTGATCCGCATGGCCGTGGCAGGACTGGTCCTCGTGGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47512280 78 + 50890351 TCTCCAGACTCCATAAACCGAGACTACACGACGCAGAACTTGATCCGCATGGCCGTGGCAGGACTGGTCCTGGTGGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45863875 78 + 49145316 TCTGTAGACTCCGTGAGCCAAGATCACACGGTGCAGAACCTGATCCGCATGGCCGTGGCAGGACTGGTCCTCATGGCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19968940 69 - 122678785 TCTGTAGATCTAGTGAACCAAGATTACACGATGGGGAATTTGATCTGAATGAGTGTAGCTGGGCTGGCT--------- i canFam3.chr1 C 0 C 0 a score=750319.000000 s hg38.chr19_GL949747v2_alt 534948 222 + 729520 CTCTTGGCCATACTGGTTGAAAATTGGCACAGCCATACGGCACTGAACAAGGAAGCCTCGGCAGATGTGGCTGAACCGAGCTGGAGCCAACAGATGTGTCAGCCAGGATTGACCTTTGCACGAACACCAAGTGTCTGCAA-GTAAACACCTGGAGGTGAAGGCAGAGAGGAGCCAGGAC-TGTGGAGTCCGACAAAGCTACTTGAAGGACACAAGAGAGAAAAG s panTro4.chr19 59811286 222 + 63644993 CTCTTGGCCATACTGGTTGAAAATTGGCACAGCCATACGGCGCTGAACAAGGAAGCCTCGGCAGATGTGGCTGAACCGAGATGGAGCCAACAGATGTGTCAGCCAGGATTGACCTTTGCATGAACACCAAGTGTCTGCAA-GTAAACACCTGGAGGTGAAAGCAGAGAGGAGTCAGGAC-TGTGGAGTCCGACAAAGCTACTTGAAGGACACAAGAGAGAAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56722781 222 + 60714840 CTCTTGGCCATACTAGTTGAAAATTGGCACAGCCATAAGGCGCTGAACAAGGAAGCCTCGGCAGATGTGGCTGAACCGAGCTGGAGCCAACAGATGTGTCAGCCAGGATTGACCTTTGCACGAACACCAAGTGTCTGCAA-GTAAACACCTGGAGGTGAAGGCAGAGAGGAGTCAGGAG-TGTGGAGTCCGACAAAGCTATTTGAAGGACACAAGAGAGAAAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103267253 221 - 106955855 CTCTTGGCCATACTGGTTG-AAATTGGCACAGCCATAAGGCACTGAACAAGGAAGCTTCGGCAGATGTGGCTGAAACGAGCTGGAACCAACAGATGTGTCAGCCAGGATTGACCTTTGCACGAACACCAAGTGTCTGCAA-GTAAACACCTGGAGGTGAAGGCAGAGAGGAGTCGGGAC-TGTGGAGTCCGACAAAGCTACTTGAAGGACACAAGAGAGAAAAG i nomLeu3.chr10 I 42041 C 0 s rheMac3.chr19 60552908 221 + 64156825 CTCTTGGCCATACTGGTTGAAAATTGGCACAGCCATAAGGCGCTGAACAAGGAAGCCTCGGCAGATGTGGCTGAACCGAGCTGGAGCCACCAGATGTGTCAGCCAGGATGGACCTTTGCACGAACACCAAGTGTCTGCAA-GTAAACATCTGGAAGTGAAGGCAGAGACGAGCCAGGAC-TGT-GAGTCCGACAAAGCTACTTGAAGGACACAAGAGAGAAAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55678787 221 + 59248254 CTCTTGGCCATACTGGTTGAAAATTGGCACAGCCATAAGGCGCTGAACAAGGAAGCCTCGGCAGATGTGGCTGAACCGAGCTGGAGCCACCAGATGTGTCAGCCAGGATGGACCTTTGCACGAACACCAAGTGTCTGCAA-GTAAACATCTGGAAGTGAAGGCAGAGACGAGCCAGGAC-TGT-GAGTCCGACAAAGCTACTTGAAGGACACAAGAGAGAAAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47792838 221 + 51301725 CTCTTGGCCATACTGGTTGAAAATTGGCACAGCCATAAGGCGTTGAACAAGGAAGCCTCGGCAGATGTGGCTGAACCGAGCTGGAGTCACCAgatgtgtcagccaggatggacCTTTGCACGAACACCAAGTGTCTGCAA-GTAAACATCTGGAAGTGAAGGCAGAGATGAGCCAGGAC-TGT-GAGTCCAACAAAGCTACTTGAAGGACACAAGAGAGAAAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47512358 221 + 50890351 CTCTTGGCCATACTGGTTGAAAATTGGCACAGCCATAAGGCGCTGAACAAGGAAGCCTCGGCAGATGTGGCTGAACCGAGCTGGAGCCAGCAGATGTGTCAGCCAGGATGGACCTTTGCACGAACACCAAGTGTCTGCAA-GTAAACATCTGGAAGTGAAGGCAGAGATGAGCCAGGAC-TGT-GAGTCCGACAAAGCTACCTGAAGGACACAAGAGAGAAAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45863953 222 + 49145316 CTCTTGGCCATACTGGCTGAAAACTGGTACAGCCATAGGGCGTTAGGCAAGGAAGCCTCGGCTGACGTGGCTGAACTGAGCTGGAGCAAGCGGAAATGTCAGACAGAATTGACCTTTGGACAAACGCCACGTGTCTGCAA-GTGAACACCTGGATGTGAAGGGAGAGACGAATCAGGACGTGTGGAGTCCTACGAAGC-ACCTGCAGGACACAGGCGAGAAGAG i calJac3.chr22 C 0 I 1134 s canFam3.chr1 19969009 222 - 122678785 CTCCTGGCCATACTGGTTGAAAATTGGCATAGTCATCACGCTCCAAACAAGGAAAACTGGCCAGATTTTCCTGAACTGAGCCAGAGTAAACAGGAATGTTAGACAGAATGGACTTTTGGACAAACTCCTAACACCCACAAGGTAGATACCTGTCAGTGAA-GCAGAAGTGAGTCAGCAC-TGTGGAGTCCTGCAGAGCTACTGGGAGAACAAAAGAGAATGAGG i canFam3.chr1 C 0 C 0 a score=37202.000000 s hg38.chr19_GL949747v2_alt 535170 25 + 729520 CTCACTAAGAAGCTTGAATCTAC---------------------tt s panTro4.chr19 59811508 25 + 63644993 CTCACTAAGAAGCTTGAATCTAC---------------------tt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56723003 26 + 60714840 CTCACTAAGAAGCTTGAATCTAC--------------------ttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103267474 46 - 106955855 TGCACTAAGAAGCTTGAATCTACTTTCTtttgtgtttttttttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60553129 28 + 64156825 CGCACTAACAAGCTTGAATCCAttttc------------------t i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55679008 28 + 59248254 CGCACTAACAAGCTTGAATCCAttttc------------------t i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47793059 38 + 51301725 CGCACTAACAAGCttgaatccattttcttttttctt--------tt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47512579 38 + 50890351 CGCGCTAACAAGCTTGAATCCAttttctttttcttt--------tt i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19969231 23 - 122678785 --CACTAAGAATTTTGGATCCACTT--------------------- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45864175 1134 + 49145316 I a score=627488.000000 s hg38.chr19_GL949747v2_alt 535195 278 + 729520 ttttttttttttgagacagagtctggctctgtcacccaggctggagtgcagtggagcaatctcggctcattgaa-------cctcttgggttcaagtgattcttgtgcctcagcctcccaagtagctggaattacaggcacataccactgcacccagct-aatttttgtatttttagtagagatggggtttcactgtgttggccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcccaaagtgctgagattataggcatgagccacca s panTro4.chr19 59811533 278 + 63644993 ttttttttttttgagacagagtctggctctgtcacccaggctggagtgcagtggagcaatctcggctcattgaa-------cctcccaggttcaagtgattcttgtgcctcagcctcccaagtagctggaattacaggcacataccaccgcacctggct-aatttttgtatttttagtagagatggggtttcactgtgttggccaggctggtctcgaactcctgacctcaagtgatccacccagcttggcctcccaaagtgctgagattataggcgtgagccacca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56723029 278 + 60714840 ttttttttttttgaggcagagtctcgctctgtcacccaggctggagtgcaatggaacaatctcggttcattgaa-------cctcccgggttcaagtgattcttgtgcctcagcctcccaagtagctggaactacaggcacataccaccgcaccgggct-aatgtttgtatttttagtagagatgggattccaccgtgttggccaggctggtctcaaactcctgacctcaagtgatccacccaccttggcctcccaaagtgctgggactacaggcatgagccacca i ponAbe2.chr19 C 0 I 333 s nomLeu3.chr10 103267520 277 - 106955855 ttttttttttttgagacagagtgtcgctctgtcacccagactggagtgcaatggagcaatctcagctcattgaa--------ctctcaggttcaagtgattcttgtgcctcagcctcccaagtagctggaattacaggcacatacaaccgcacctggct-aatttttgtatttttagtagagatggggtttcaccgtgttggccaggctggtctcgaactcctgacctcaagtgatccacccaccttggcctcccaaagtgctgagactacaggcgtgagccacca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60553157 285 + 64156825 ttttttttttttgggacggagtctcgctctgtcacccaggctggagtgcagtggcacgatctcggctcactgcaacctctgccccctggatgcgagtgattctggtgccacagcctcccaagtagctggaactgcaggcacacaccaacgcacatggct-actttttgtatttttagtagacacaaggtttcaccgtgttggccaggctggtatcgaactcctgacctcaagtgatccacccacctgggtctcccaaagtgctgggattacaggcgtgagacaccg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55679036 285 + 59248254 ttttttttttttgggacggagtctcgctctgtcacccaggctggagtgcagtggcacgatctcggctcactgcaacctctgcctcctggattcaagtgattctggtgccacagcctcccaagtagctggaactgcaggcacacaccaacgcacctggct-aatttttgtatttttagtagagacaaggtttcaccgtgttggccaggctggtctcgaactcctgacctcaagtgatccacccacctgggtctcccaaagtgctgggattacaggcgtgagacaccg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47793097 286 + 51301725 ttttttttttttgagacagagtctcgctctatcacccaggctggagtgcagtggcacgatctcggctcactgcaacctccgcctcccgggttcaaatgattctggtgccacagcctcccaagtagctggaactgcaggcacacaccaacgcacccggctaaatttttgtatttttagtagagacaaggtttcaccgtgttggccaggctgatctcgaactcctcacctcaagtgatccacccacctcggtctcccaaagtgctgggattacaggcgtgagacaccg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47512617 285 + 50890351 ttttttttttttgagacagagtctcgctctatcacccaggctggagtgcagtggcatgatctcggctcactgcaagctctgcctcctggattcaagtgattctcgtgcctcagcctcccaagtagctggaactgcaggcacacaccaacgcacccggct-aatttttgtatttttagtagagacaaggtttcaccgtgttgaccaggctggtctcaaactcctgacctcaagtgatctgcccacctcagtctcccaaagtgctgggattacaggcgtgagacaccg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19969254 0 - 122678785 C e calJac3.chr22 45864175 1134 + 49145316 I a score=11313.000000 s hg38.chr19_GL949747v2_alt 535473 5 + 729520 cgcct s panTro4.chr19 59811811 5 + 63644993 cgcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56723640 5 + 60714840 caccc i ponAbe2.chr19 I 333 C 0 s nomLeu3.chr10 103267797 5 - 106955855 cacct i nomLeu3.chr10 C 0 I 310 s rheMac3.chr19 60553442 5 + 64156825 cgcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55679321 5 + 59248254 cgcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47793383 5 + 51301725 cgcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47512902 5 + 50890351 cgcct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19969254 0 - 122678785 C e calJac3.chr22 45864175 1134 + 49145316 I a score=31368.000000 s hg38.chr19_GL949747v2_alt 535478 14 + 729520 ggccAGATGCATGT s panTro4.chr19 59811816 14 + 63644993 ggccAGATGCATGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56723645 14 + 60714840 ggccAGATACATTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103268112 14 - 106955855 ggccAGATGCATTT i nomLeu3.chr10 I 310 C 0 s rheMac3.chr19 60553447 14 + 64156825 gcccAGATGCATTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55679326 14 + 59248254 gcccAGATGCATTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47793388 14 + 51301725 ggccagatgcATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47512907 14 + 50890351 ggccAGATGCATTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19969254 0 - 122678785 C e calJac3.chr22 45864175 1134 + 49145316 I a score=190810.000000 s hg38.chr19_GL949747v2_alt 535492 69 + 729520 TCAAACCAATCAAATGGTGTTTTCTTATGCAGGACTGATCGATTTGCACCC-ACCTTTCTGCACATAAGT s panTro4.chr19 59811830 69 + 63644993 TTAAACCAATCAAACGGTGTTTTCTTATGCAGGACTGATCGATTTGCACCC-ACTTTTCTGAACATAAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56723659 69 + 60714840 TCAAACCAATCAAATGGTGTTTTCTTATGCAGGACTGATCGATTTGCACCC-ACCTTTCTGAACATCAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103268126 69 - 106955855 TCAAACCAATCAAATGGTGTTTTCTTATGCAGGACTGATCGATTTGCACCC-ACCTTTCTGAACATCAGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60553461 70 + 64156825 TCAAACCAATCAAATGGTGTTTTCTTATGCAGGACTGATCGATTTGCCCCCTACCTTTCTGAACATCAGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55679340 70 + 59248254 TCAAACCAATCAAATGGTGTTTTCTTATGCAGGACTGATCGATTTGCCCCCTACCTTTCTGAACATCAGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47793402 70 + 51301725 TCAAACCAATCAAATGGTGTTTTCTTATGCAGGACTGATCGATTTGCCCCCTACCTTTCTGAACATCAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47512921 70 + 50890351 TCAAACCAATCAAATGGTGTTTTCTTATGCAGGACTGATCGATTTGCCCCCTACCTTTCTGAACATCAGT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19969254 70 - 122678785 TCAAACCAATCCAATGGTATTTTCTTATACATATCTGGTATCGTTGTACACCACCTTTCTAGATGTTGGT i canFam3.chr1 C 0 I 1150 e calJac3.chr22 45864175 1134 + 49145316 I a score=872599.000000 s hg38.chr19_GL949747v2_alt 535561 393 + 729520 TATGGTTTTCCATC-TTATCTGTCTTCTGATTTTTTATATCCTG-TTTAATTTCTTCCTTCATTGTTCTTCTCTTt-ttttattt-attt-tatttatttttatttttattttta--tttgagacagagtctcactctgttgcccaggctggagtgcagtggcacgatctcggctcactgcaacctctgcctcctgggttcaagtgattctcctgcctcggcctcccaagtagctgggattacaggctcccaccatcacgcccagctactttta-cagta-tttttagtagagacggggtttcatcacattggccaagctggtctcaaacttctgacctcgtgatctgcccgcctcggcctcccaaagtgctgggattacagatgtgagccactgcgcccag s panTro4.chr19 59811899 389 + 63644993 TATGGTTTTCCATC-TTATCTGTCTTCTGATTTTCTATATCCTG-TTTAATTTCTTCCTTCATTGTTCTTCTCTTt-ttttattt------tatttatttttatttttattttta--tttgagacagagtctcactctgttgcccaggctggagtgcagtggcacgatctcggctcactgcaacctctgcctcctgggttcaagtgattctcccgcctcggcctcccaagtagctgggattacaggctcccaccatcatgcccagctactttta-cagta-tttttagtagagacggggtttcatcacattggccaagctggtctcaaacttctgacctcgtgatctgcccgcctcggcctcccaaagtgctgggattacagacgtgagccactgcacccag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56723728 396 + 60714840 TATGGTTTTCCATC-TTATCTGTCTTCTGATTTTTTATACCCTGTTTTAATTTCTTCCTTCATTGTTCTTCTCTTt-ttttattttatttatttttatttttatttttattttta--tttgagacagagtctcactctgttgcccaggctagagtgcagtggcatgatctcggctcactgcaacctctgcctcccgggttcaagcaattctcctgcctcagcctcccaagtagctgggattacaggctcccaccatcacacccagctaattttt-ttgta-tttttagtagagacggggtttcatcatgttggccaagctggtctcaaactcctgacctcgtgatccacccgccttggcctcccaaagtgctgggattacagacgtgagccacggcgcccgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103268195 386 - 106955855 TATGGTTTTCCATC-TTATCTGTCTTCTGATTTTTTATATCCCG-TTTAATTTCTTCCTTCATTGTTCTTCTCTTT-tttt----------tattt-tatttatttttattttta--tttgagacagagtctcactctgttgcccaggctagagtgcagtggcacgatctcggctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcgcctgccaccacacccagctaatttttgttgtattttttagtacagacggggtttcactgtgttagccgggatggtctcactctcctgaccttgtgatctgcccacctcagcctcccaaagtgctgggattacaggcatgagctaccgcgcctgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60553531 392 + 64156825 TATGGTTTTCCACCTTTATCTGTCTTCTGATTTTTTATATCCTG-TTTAATTTCTTCCTTCATTGTTCttttttttaatttattt------tattCAtttttatttttatttttatttttgagacggagtctcactctgttgcccaggccagagtgcaatggcacgatctcagctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcggcctcccaagtagctggaattacaggctcccaccatcatgcccagctaattttt-gtgta-tttttagtagagac-gggcttcatcatgttggccaagctggtctcaaactcctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacagacgtgagacactgcgcccgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55679410 392 + 59248254 TATGGTTTTCCACCTTTATCTGTCTTCTGATTTTTTATATCCTG-TTTAATTTCTTCCTTCATTGTTCTTTTTTTTAATTTATTT------TATTCAtttttatttttatttttatttttgagacggagtctcactctgttgcccaggccagagtgcaatggcacgatctcagctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcggcctcccaagtagctggaattacaggctcccaccatcatgcccagctaattttt-gtgta-tttttagtagagac-gggcttcatcatgttggccaagctggtctcaaactcctgacctcgtgatccgcccacctcggcctcccaaagtgctgggattacagacgtgagacactgcgcccgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47793472 386 + 51301725 TATGGTTTTCCACCTTTATCTGTCTTCTGattttttatatcctg-tttaatttcttccttcattgttctttttttaaatttattt------ta------tttatttttatttttatttttgagatggagtctcactctgttgcccaggccagagtgcagtggcacgatctcagctcactgcaacctctgcctcctgggttcaagcgattctcctgccttggcctcccaagtagctggaattacaggctcccaccatcatgcccagctaattttt-gtgta-tttttagtagagac-gggcttcatcatgttggccaagctggtctcaaactcctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacagacgtgagccactgcgcccgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47512991 392 + 50890351 TATGGTTTTCCACCTTTATCTGTCTTCTGATTTTTTATATCCTG-TTTAATTTCTTCCTTCAttgttcttttttttaatttattt------tatttatttttatttttatttttatttttgagacagagtctcactctgttgcccaggccagagtgcagtggcacgatctcagctcactgcaacctctgcctcctgggttcaagcaattctcctgcctcggcttcccaagtagctggaattacaggctcccaccatcatgcccagctaattttt-gtgta-tttttagtagagac-gggcttcatcatgttggccaagctgatctcaaactcctgacctcatgatccgcccacctcgggctcccaaagtgctgggattacagacgtgagccactgcacccgg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19969324 1150 - 122678785 I e calJac3.chr22 45864175 1134 + 49145316 I a score=58556.000000 s hg38.chr19_GL949747v2_alt 535954 24 + 729520 ccTTCTTTT-TATATTTTTAAATGT s panTro4.chr19 59812288 24 + 63644993 ccTTCCTTT-TATATTTTTAAATGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56724124 24 + 60714840 tcTTCTTTT-TATATTTTTAAATGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103268581 25 - 106955855 ccAACCGTGACACATTTTAAAATGT i nomLeu3.chr10 C 0 I 3854 s rheMac3.chr19 60553923 24 + 64156825 ccTTCTTTT-TATATTTTTAAATAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55679802 24 + 59248254 ccTTCTTTT-TATATTTTTAAATAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47793858 24 + 51301725 ccttctttt-tatatttttaaatct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47513383 24 + 50890351 ccTTCTTTT-TATATTTTTAAATGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45865309 24 + 49145316 CCTTCATTT-TATATTTTTAAATGT i calJac3.chr22 I 1134 C 0 e canFam3.chr1 19969324 1150 - 122678785 I a score=493724.000000 s hg38.chr19_GL949747v2_alt 535978 220 + 729520 GTCTTCCCCAAATATAAATGGTTGGTAAGCATGCCAAATATATTCAATAACCcccctcctttatttttttttgttgaagtgaggctctccc--tatgttgcctaagctggtcttgaactcctggtctcaagcaatcctcctacctcAGCCTCCTGCTG----TGTTCATCTACAAATTGATAAGAGTGAAAGTCATAATCCTACAGGAGGATTACCCTATTTATTT s panTro4.chr19 59812312 220 + 63644993 GTCTTCCCCAAATATAAATGGTTGGTAAGCATGCCAAATATATTCAGTAACCCCCCTCCtttatttttttttgttgaagtgaggctctccc--tatgttgcctaagctggtcttgaacccctggtctcaagcaatcctcctacctcagcctccTGCTG----TGTTCATCTACAAATTGATAAGAGTGAAAGTCATAATCCTACAGGAGGATTACCCTATTTATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56724148 218 + 60714840 GTCTTCCCCAAATATAAATGGTTGGTAAGCATGCCAAATATATTCAGTAACCCCCCTCCtttatttttttttgttgaagtgaggctctccc--tatgttgcctaagctggtcttgaactcctggtctcaagcaatcctcctacctcagcctcctgTTG----TGTTCATCTACAAATTGAT--GAGTGAAAGTCATAATCCTACAGGGGGGTTACCCTATTTATTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60553947 226 + 64156825 GTCTTCCCCAAATATAAATGGTTGGTAAGCATGCCAAATATATTCAGGAACCTCCCTCCtttattttttattgttgaagtgaggctctccctatatgttgcccgagctggtcttgaactcctggtctcaagcaatcctcctacctcagcctccTGTTGTGTTTGTTCATCTACAAATTGATAAGGGTGAAAGTCATAATCCTACAGGGGGATTACCCTATTTATTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55679826 226 + 59248254 GTCTTCCCCAAATATAAATGGTTGGTAAGCATGCCAAATATATTCAGGAACCCCCCTCCtttattttttattgttgaagtgaggctctccctatatgttgcccgagctggtcttgaactcctggtctcaagcaatcctcctacctcagcctccTGTTGTGTTTGTTCATCTACAAATTGATAAGGGTGAAAGTCATAATCCTAGAGGGGGATTACCCTATTTATTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47793882 226 + 51301725 gtcttCCCCAAATATAAATGGTTGGTAAGCATGCCAAATATATTCAGGAACCCCCCTCCTTTATTTTTGATTGTTGAAGTGAGGCTCTCCCTATATGTTGcccgagctggtcttgaactcctggtctcaagcaatcctcctacctcagcctcctgttgTGTTTGTTCATCTACAAATTGATAAGGGTGAAAGTCATAATCCTACAGGGGGATTACCTTATTTATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47513407 226 + 50890351 GTCTTCCCCAAATATAAATGGTTGGTAAGCACGCCAAATATATTCGGTAACCCCCCTCCtttattttttattgttgaggtgaggctctccctatatgttgcccgagctggtcttgaactcctggtctcaagcaatcctcctacctcagcctccTGTTGTGTTTGTTCATCTACAAATTGATAAGGGTGAAAGTCATAATCCTACAGGGGGATTACCCTATTTATTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45865333 207 + 49145316 GCTTTCCCTAAATATAAACAGTTGCTGACCATGCCAAACGTATTCACTAGCC-CTGTCCtttattttttgttgtcaagatggggggctcct--tatgttgtccaagctggtcttgaactcctggtctcaagcaatcctcgtacctcagccttcTGTTG----TGTTCATCTACAAATTGATGAGGGGGAAAGTCATCA------------ATTATCCTATTTATTT i calJac3.chr22 C 0 I 316 e canFam3.chr1 19969324 1150 - 122678785 I e nomLeu3.chr10 103268606 3854 - 106955855 I a score=59316.000000 s hg38.chr19_GL949747v2_alt 536198 26 + 729520 CACAAACCCTATTTCTACCGGATTTT s panTro4.chr19 59812532 26 + 63644993 CACAAACCCTATTTCTACTGGATTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56724366 26 + 60714840 CACAAACCCTGTTTCTATGGGATTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60554173 26 + 64156825 CACAAACCCTATTTCTGTGGGATTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55680052 26 + 59248254 CACAAACCCTATTTCTGTGGGATTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47794108 26 + 51301725 CACAAACCCTATTTCTATGGGATTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47513633 26 + 50890351 CCCAAACCCTATTTCTATGGGAtttt i chlSab2.chr6 C 0 I 321 s calJac3.chr22 45865856 26 + 49145316 CACAAACCCTATTTCTAAGGGATTTT i calJac3.chr22 I 316 C 0 e canFam3.chr1 19969324 1150 - 122678785 I e nomLeu3.chr10 103268606 3854 - 106955855 I a score=133180.000000 s hg38.chr19_GL949747v2_alt 536224 58 + 729520 CATACAAGGAATACAGGCATGTGTT-----TCACCTCATTAATTTATTTTTTCACTTAGTTTT s panTro4.chr19 59812558 58 + 63644993 CATACAAGGAATACAGGCATGTGTT-----TCACCTCATTAATTTATTTTTTCACTTAGTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56724392 58 + 60714840 CATATAAGGAATACAGGCATGTGTT-----TCAACTCATTAATTTATTTTTTCACTTAGTTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60554199 63 + 64156825 CATACAAGGAACACAGGCATGTGTTTTGCCTCAACTCATTAATTTATTTTTTCACTTAGTTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55680078 63 + 59248254 CATACAAGGAACACAGGCATGTGTTTTGCCTCAACTCATTAATTTATTTTTTCACTTAGTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47794134 63 + 51301725 CATACAAGGAACACAGGCATGTGTTTTGCCTCaactcattaatttattttttcacttagtttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47513980 63 + 50890351 CATACAGGGAACACAGGCATGTGTTTTGCCTCAACTCATTAATTTATTTTTTCACTTAGTTTT i chlSab2.chr6 I 321 C 0 s calJac3.chr22 45865882 63 + 49145316 CATACGAGAAACAGAGGCATGTGTTCCACATCAACCTGTTAATTTATTTTTTCATTTAGtttt i calJac3.chr22 C 0 I 4013 e canFam3.chr1 19969324 1150 - 122678785 I e nomLeu3.chr10 103268606 3854 - 106955855 I a score=375303.000000 s hg38.chr19_GL949747v2_alt 536282 222 + 729520 GATGATATTCACAtatattatcaagtgtgcaaacattaaattcttgtgtacaaaactcaaatggtcttccaaataattccccattcttttttcttataaactttcacagctttacccttgacagactttactca-aggaaatctaagttggtcatatgtggctctttcactgattgctatttacttcattgtccagtagcttatgtatgaaaatataattata s panTro4.chr19 59812616 222 + 63644993 GATGATATTCACATATATTATCAAGTGTGCAAACATTAaattcttgtgtacaaaactcaaatggtcttccaaataattccccattcttttttcttataaactttcacagctttacccttgacagactttactca-aggaaatctaagttggtcatatgtggctctttcactgattgctatttacttcattgtccagtagcttatgtatgaaaatataattata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56724450 223 + 60714840 CATAATATTCACATATATTACCAAGTGTGCAAACATTAAAATCTTGTGTACAAAACTCAAATGGTCTTCCAAATAATTCCCCATTCTTTTTTCTTATAAATTTTCACAGCTTTACCCTTGACAGACTTTACTCACAGGAAATCTAAGTTGGTCATATGTGGCTCTTTCACTGATTACTGTTTACTTCATTGTCCAGTAGTTTATGTATGAAAATATAATTATA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60554262 211 + 64156825 CATAATATTCATATATATTACCAAGTGTGCAAACATTAAATTCTTGTGTACAAAACTCAAATAGTCTT------------CCATTCTTTTTTCTTATAAACTTTCACAGCTTTACCCTTCACAGACTTTATTCAAAGGAAATCGAAGTTGGTCATATGTAGCTCTTTCACTGATTACTATTTACTTCATCGTCCAGTAGTTTATGTATGAAAATATAATTATA i rheMac3.chr19 C 0 I 401 s macFas5.chr19 55680141 211 + 59248254 CATAATATTCATATATATTACCAAGTGTGCAAACATTAAATTCTTGTGTACAAAACTCAAATAGTCTT------------CCATTCTTTTTTCTTATAAACTTTCACAGCTTTACCCTTCACAGACTTTATTCAAAGGAAATCGAAGTTGGTCATATGTAGCTCTTTCACTGATTACTATTTACTTCATCGTCCAGTAGTTTATGTATGAAAATATAATTATA i macFas5.chr19 C 0 I 1276 s papAnu2.chr19 47794197 211 + 51301725 cataatattcatatatattaccAAGTGTACAAACATTAAATTCTTGTGTACAAAACTTAAATagtctt------------ccattcttttttcttataaactttCACAGCTTTACCCTTGACAGACTTTACTCAAAGGAAATCGAAGCTGGTCATACGTAGCTCTTTCACTGATTACTATTTACTTCATCGTCCAGTAGTTtatgtatgaaaatataattata i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47514043 211 + 50890351 CATAATATTCATATATATTACCAAGTGTACAAACATTAaattcttgtgtacaaaactcaaatagtctt------------ccattcttttttcttataaactttcacagctttacccttgacagactttactcaaaggaaatcgaagctggtcatatgtagctctttcactgattactatttactccatcgtccagtagtttgtgtatgaaaatataattata i chlSab2.chr6 C 0 I 1 e canFam3.chr1 19969324 1150 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I e nomLeu3.chr10 103268606 3854 - 106955855 I a score=177044.000000 s hg38.chr19_GL949747v2_alt 536504 217 + 729520 aaatgtaagggtcctacttccagtgaaactgaagggacttaggcccacttttatcctttactgagagcttatctctacttgataaaatttctactgtattcttggcttaactcaggtcctgtgattaaaaaaaa-------aatgcaaag--------tatttctaactttctttattgactgcttttcacactttatacaagttctggcccatatcttcagtttgttcTGA s panTro4.chr19 59812838 215 + 63644993 aaatgtaagggtcctacttccagtgaaactgaagggacttaggcccacttttatcctttactgagagcttatctctacttgataaaatttctactgtattcttggcttaactcaagtcctgtgattaaaaaaaa---------tgcaaag--------tatttctaactttctttattgactgcttttcacactttatacaagttctggcccatatcttcagtttgttctga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56724673 216 + 60714840 CAATGTAAGGGTCCTACTTCCAGTGAAACTGGAGGGACTTAGGCCCACTTTTATCCTTTACTGAGAGCTTATCTCTACTTGATAAAATTTCTGCTGTATTCTTGGCTTAACTCATGTCCTGTGATTAAAAAAAA--------ATGCAAAG--------TATTTCTAATTTTCTTTATTGACTGCTTTTCACACTCTATACAAGTTCTGGCCCATGTCTTCAGTTTGTTCTGA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47794409 223 + 51301725 aaatgtaa-ggtCCTACTTCCAGTGAAACTGGAGGGACTTATGCCCACTTTTATCCTTTACTGAGAGCTTATCTCTACCTGATAAAATTTCTACTGTATTCTTGGCTTAACTCATGtcctgtgattaaaaaaaaaaaaaaaaaagcaaag--------tatttCTAATTCTCTTTATTGACTGCTTTTCATACCTTATACAAGTTCTGGCCCATATCTTCagtttgttctga i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47514255 230 + 50890351 aaatgtaa-ggtcctacttccagtgaaactggaggg-cttatgcccacttttatcctttactgagagcttatctctacctgataaaatttctactgtattcttggcttaactcacgtcctgtgattaaaaaaaaaaaaaaaaaaaaaaaaGCTTTGCTTTTTTCTAATTCTCTTTATTGACTGCTTTTCATACCTTATACAAGTTCTGGCCCATATCTTCAGTTTGTTCTGA i chlSab2.chr6 I 1 C 0 e canFam3.chr1 19969324 1150 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I e nomLeu3.chr10 103268606 3854 - 106955855 I e macFas5.chr19 55680352 1276 + 59248254 I e rheMac3.chr19 60554473 401 + 64156825 I a score=3180.000000 s hg38.chr19_GL949747v2_alt 536721 7 + 729520 TTttttt s panTro4.chr19 59813053 7 + 63644993 ttttTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56724889 7 + 60714840 Atttttt i ponAbe2.chr19 C 0 I 1892 s chlSab2.chr6 47514485 7 + 50890351 ttttttt i chlSab2.chr6 C 0 I 498 e canFam3.chr1 19969324 1150 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I e nomLeu3.chr10 103268606 3854 - 106955855 I e papAnu2.chr19 47794632 0 + 51301725 C e macFas5.chr19 55680352 1276 + 59248254 I e rheMac3.chr19 60554473 401 + 64156825 I a score=191.000000 s hg38.chr19_GL949747v2_alt 536728 2 + 729520 ca s panTro4.chr19 59813060 2 + 63644993 CA i panTro4.chr19 C 0 C 0 e canFam3.chr1 19969324 1150 - 122678785 I e ponAbe2.chr19 56724896 1892 + 60714840 I e calJac3.chr22 45865945 4013 + 49145316 I e nomLeu3.chr10 103268606 3854 - 106955855 I e chlSab2.chr6 47514492 498 + 50890351 I e papAnu2.chr19 47794632 0 + 51301725 C e macFas5.chr19 55680352 1276 + 59248254 I e rheMac3.chr19 60554473 401 + 64156825 I a score=1173.000000 s hg38.chr19_GL949747v2_alt 536730 4 + 729520 ccag s panTro4.chr19 59813062 4 + 63644993 ccag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103272460 4 - 106955855 ccag i nomLeu3.chr10 I 3854 C 0 e canFam3.chr1 19969324 1150 - 122678785 I e ponAbe2.chr19 56724896 1892 + 60714840 I e calJac3.chr22 45865945 4013 + 49145316 I e chlSab2.chr6 47514492 498 + 50890351 I e papAnu2.chr19 47794632 0 + 51301725 C e macFas5.chr19 55680352 1276 + 59248254 I e rheMac3.chr19 60554473 401 + 64156825 I a score=80471.000000 s hg38.chr19_GL949747v2_alt 536734 174 + 729520 gtgtggtggcaggtgcctgtagtcccagctactccaggggctgaggcaggagaatggcgtgaacctggg-aggcggggcttgcaatgagctgagatcacgccactacactccagcctgggccacagagcgagactccgtctcaaaagtaaacaaacaaataaaT-AATAAATAAAT s panTro4.chr19 59813066 174 + 63644993 gtgtggtggcaggtgcctgtagtcccagctactccgggggctgaggcaggagaatggcgtgaacctggg-aggcggggcttgcaatgagctgagatcacgccactacactccagcctgggccacagagcgagactccgtctcaaaagtaaacaaacaaataaac-aataaataaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56726788 176 + 60714840 gtgtggtggcaggcacctgtagtcccagctactcgggaggctgaggcaggagaatgcgctgaacccgggaaggaggggcttgcattgagctgggatcacgccactgcactccagccggggtgacagagcgagactgcgtctcataagtaaacaaacaaataaataaataaataaat i ponAbe2.chr19 I 1892 C 0 s nomLeu3.chr10 103272464 167 - 106955855 gcgtggtggcagacgcctgtagtcccagctactccagaggctgaggcaggagaatggcatgaacctggg-aggcggagcttgcaatcagctgagatcacgccactgcactccagcctgggccacagagtgagactctgtctcaaaagtaaacaaata--------aataaataaat i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19969324 1150 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I e chlSab2.chr6 47514492 498 + 50890351 I e papAnu2.chr19 47794632 0 + 51301725 C e macFas5.chr19 55680352 1276 + 59248254 I e rheMac3.chr19 60554473 401 + 64156825 I a score=192577.000000 s hg38.chr19_GL949747v2_alt 536908 297 + 729520 AAATAAA----GGGAAAGTGCCACAATTTTGGATGAAGGGGGTTGAGGGACTTTACGTCAGGTCCAGGACTTGGATTACAGAGACACAATGGGGCTAGATTCCCAGAGATGGATAAGATTAAACTCATATAAGTCGTTTTGCTGACAGAAGGACCTTGTTTGGAAAAAGCGTT------TTCAGAATAATAAAGTTCCTGAGCTCTTCAGAAAAGTATTTTATTGTCCTGTAACCACAGTAACAAGTAGCCACCAAAACTGATTTTTAACCCATCATCAATGACAACTCATCTCTGTGAAGATGCTC s panTro4.chr19 59813240 301 + 63644993 aaataaataaaGGGAAAGTGCCACAATTTTGGATGAAGGGGGTTGAGGGACTTTACGTCAGGTCCAGGACTTGGATTACAGAGACACAATGGGGCTGGATTCCCAGAGATGGATAAGATTAAACTCATATAAGTCATTTTGCTGATGGAAGGACCTTGTTTGGAAAAAGCGTT------TTCAGAATAATAAAGTTCCTGAGCTCTTCAGAAAAGTATTTTATTGTCCTGTAACCACAGTAACAAGTAGCCACCAAAACTGATTTTTAACCCATCATCAATGACAACTCATCTCTGTGAAGATGCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56726964 297 + 60714840 aaataaa----GGGAAAGCGCCACAATTTTGGATGAAGGGGGATGAGGGACTTTACAGCGGGTCCAGGACTTGGATTACAGAGACACAACGGGGCTGGATTCCCAGGGATGCATAAGATTAAACTCATATAAGTCGTTTTGCTGACGGAAGGACCTTGTTTGGAAAAAGTTTT------TTCAGAATAATAAAGTTCCTGAGCTCTTCAGAAAAATATTTTCTTGTCCTGTAACCACAGTAACAAGTAGCCACCAGAACTGATTTTTAACCCATCATCAATGACAACTCGTCTCTGTGAAAATGCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103272631 296 - 106955855 aaaTAAA----GGGAAAGTGCACCAATTTTGGATGAAGGGGGATGAGGGACTTTATGTCGGGTCCAGGACTTGTATTACAGAGACACAATGGGGCTGGATTCCCAGGGATGGATAAGATTAAACTCATGTAAGTCGTTTTGCTGATGGAAGGACCTTGTTTGGAAAAAGCGTT------TTCAGAATAA-AAAGTTCCTGAGCTCTTCAGAAAAATATTTTATTGTCCTGTAACCACAGTAACAAGTAGCCACCAGAACTGATTTTGAACCCATCATCAATGACAACTCATCTCTGTGAAAATGCTC i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19970474 286 - 122678785 AAACTAT----GAGTAAGTGCCACAGTTTCAGAGGATGGCTAATCAGAGACTTTACAGCAGAGCCAG---------------GATGCAATGGGGCTGGATCCTGACAGAGGGATAAGATTAGCCTCACACGCTTGGTTTTTTCCACATAAGAGCCTTGTTTGGAAAGCATACTATAACCTTGGGAATAA-AAGCATCCTCCCATCCTAGGAAAAG-ACTATATTATCCTGTAGCCATGATGACAAGGAGCCACCAGAACCAATTTTTCACCCATTGTCAAGGAGCACTCACCTCAGTGAAAATGCCT i canFam3.chr1 I 1150 C 0 e calJac3.chr22 45865945 4013 + 49145316 I e chlSab2.chr6 47514492 498 + 50890351 I e papAnu2.chr19 47794632 0 + 51301725 C e macFas5.chr19 55680352 1276 + 59248254 I e rheMac3.chr19 60554473 401 + 64156825 I a score=-347.000000 s hg38.chr19_GL949747v2_alt 537205 1 + 729520 t s panTro4.chr19 59813541 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56727261 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103272927 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60554874 1 + 64156825 t i rheMac3.chr19 I 401 C 0 s canFam3.chr1 19970760 1 - 122678785 T i canFam3.chr1 C 0 I 6 e calJac3.chr22 45865945 4013 + 49145316 I e chlSab2.chr6 47514492 498 + 50890351 I e papAnu2.chr19 47794632 0 + 51301725 C e macFas5.chr19 55680352 1276 + 59248254 I a score=4120.000000 s hg38.chr19_GL949747v2_alt 537206 11 + 729520 ttttttttttt s panTro4.chr19 59813542 7 + 63644993 ttttttt---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56727262 9 + 60714840 ttttttt--tt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103272928 11 - 106955855 TCttttttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60554875 11 + 64156825 ttttttttttt i rheMac3.chr19 C 0 C 0 e canFam3.chr1 19970761 6 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I e chlSab2.chr6 47514492 498 + 50890351 I e papAnu2.chr19 47794632 0 + 51301725 C e macFas5.chr19 55680352 1276 + 59248254 I a score=39828.000000 s hg38.chr19_GL949747v2_alt 537217 33 + 729520 ttttttttttgagacggggtcttgctctgtcac s panTro4.chr19 59813549 23 + 63644993 ----------gagacggggtcttgctctgtcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56727271 33 + 60714840 ttttttttttgagacggggtcttgctctgtcac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103272939 33 - 106955855 ttttttttttgagacggggtcttgctctgtcac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60554886 33 + 64156825 ttttttttttgagacggagtcttgctctgtcac i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47794632 33 + 51301725 ttttttttttgagacggagtcttgctctgtcac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19970761 6 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I e chlSab2.chr6 47514492 498 + 50890351 I e macFas5.chr19 55680352 1276 + 59248254 I a score=444735.000000 s hg38.chr19_GL949747v2_alt 537250 289 + 729520 ccaggctggggagcagtgacgtgacctcggctccctgcaacctctctttcccgggttc-agcaattctcctgcctcagcctccccagtagctgggattataggcacctgccaccacacgcagataa-tttttgtatttttagtacagac-gggtttcgccatgttggccaagctggtcacaaacttctgacctcagggtgatctgcctgcctcagcctctcaaagtgctgggattacaggagtgagccacaaagcccggccACTCCATACGTTTTATATTGTTATGTTACCA s panTro4.chr19 59813572 289 + 63644993 ccaggctggggagcagtgacgtgatctcggctccctgcaacttctctttcccgggttc-agcaattctcctgcctcagcctccccagtagctgggattataggcacctgccaccacacgcagataa-tttttgtatttttagtacagac-gggttttgccatgttggccaagctggtcacgaacttctgacctcagggtgatctgcctgcctcagcctctcaaagtgctgggattacaggagtgagccacaaagcccggccACTCCATACGTTTTATATTGTTATGTTACCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56727304 289 + 60714840 ccaggctggggagcagtgacgcgatcttggctcactgcaacctctccttcccgggttc-agcgattctcctgcctcagcctccccagtagctgggattataggcacctgccaccacacgcagataa-tttttgtattttcagtacagac-gggtttcgccatgttgaccaagctggtcacgaacttctgacctcagggtgatctgcctgcctcagcctctcaaagtgctgggattacaggagtgagccacaaagcctggccACTCCATACATTTTATATTGTTATGTTACCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103272972 289 - 106955855 ctaggctggggagtagtgacgcgatcttggctcactgcaacctctccttcccgagttc-agggattctcctgcctcagcctcccctgtagctgggataataggcacctgccaccacacgcagataa-tttttgtatttttagtacagac-agttttcgccatgttggccaagctggtcacgaacttctgacctcagggtgatctgcctgcctcagcctctcaaagtgctgggattacaggagtgagccacaaagcccagccATTCCATACATTTTATATTGTTATGTTACCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60554919 290 + 64156825 ccaggctggagtgcagtggcacgatctcggctcactgcaacctccgcctccaaggttcaagcaattctcctgcctctgcctcctgagtagctgggactacaggcgtgcaccactacacccagctaagtttttgtatttt-agtagagatggggttttgccttgttagccaggctggtctcaaactcctgacctta-agtgatctgcccgtctccgcctcccaaagtgctgggattacaggcatgagccacaaagcccggccACTCCATACATTTTATATTGTTATGTTACCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55681628 290 + 59248254 ccaggctggagtgcagtggcacgatctcggctcactgcaacctccgcctccaaggttcaagcgattctcctgcctctgcctcctgagtagctgggactacaggcgtgcaccactacgcccagctaagtttttgtatttt-agtagagatggggttttgccttgttagccaggctggtctcaaactcctgacctta-agtgatctgcccgtctccgcctcccaaagtgctgggattacaggcatgagccacaaagcccggccACTCCATACATTTTATATTGTTATGTTACCA i macFas5.chr19 I 1276 C 0 s papAnu2.chr19 47794665 290 + 51301725 ccaggctggagtgcagtggcgcaatctcagctcactgcaacctccgcctcccaggttcaagcgattctcctgcctccgcctcctgagtatctgggactacaggcgtgcactgccatgccctgctaaattttcatatttt-aatagagatggggttttgccttgttaaccaggctggtctcaaactcctgacctta-aatgatccacccgtcttggcctcccaaagtgctgggattacaggcatgagccacaaagCCCGGCCACTCCATACATTTTATATTGTTATGTTACCA i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19970761 6 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I e chlSab2.chr6 47514492 498 + 50890351 I a score=53631.000000 s hg38.chr19_GL949747v2_alt 537539 24 + 729520 TCAGTCAGGCAGCTCCTTGCTTCT s panTro4.chr19 59813861 24 + 63644993 TCAATCAGGCAGCTCCTTGCTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56727593 24 + 60714840 CCAATCAGACAGCTCCTTGCTTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103273261 24 - 106955855 TCAATCAGACAGCTCCTTGCTTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60555209 24 + 64156825 CCAATCAGACAGCTCCTTGCTTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55681918 24 + 59248254 CCAATCAGACAGCTCCTTGCTTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47794955 24 + 51301725 CCAATCAGACAgctccttgctttt i papAnu2.chr19 C 0 I 3132 s canFam3.chr1 19970767 24 - 122678785 TCAACCAATCAGCTCCTTGCATTT i canFam3.chr1 I 6 C 0 e calJac3.chr22 45865945 4013 + 49145316 I e chlSab2.chr6 47514492 498 + 50890351 I a score=39530.000000 s hg38.chr19_GL949747v2_alt 537563 26 + 729520 AAAAGTCATCCAATCAGA------CTCATTTC s panTro4.chr19 59813885 26 + 63644993 AAAAGTCATCCAATCAGA------CTCATTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56727617 26 + 60714840 AAAAGTCATCCAATCAGA------CTCATTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103273285 26 - 106955855 AAAAGTCATCCAATCAGA------CTCATTTC i nomLeu3.chr10 C 0 I 140 s rheMac3.chr19 60555233 26 + 64156825 AAAAGTCATCCAATCCGA------CTCATTTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55681942 26 + 59248254 AAAAGTCATCCAATCCGA------CTCATTTC i macFas5.chr19 C 0 C 0 s canFam3.chr1 19970791 32 - 122678785 AAATATCAGCCAATCAGAAACAAGTTTACTCC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45865945 4013 + 49145316 I e chlSab2.chr6 47514492 498 + 50890351 I e papAnu2.chr19 47794979 3132 + 51301725 I a score=100243.000000 s hg38.chr19_GL949747v2_alt 537589 101 + 729520 AGTAAACACCCAAGCATGAGTGACAACCAATCAAAGTAATATCTTCCCAATGACCACACTTTTCCAGATGACGTCAAGCCACAGAAGGCCCTGAAAATCCA s panTro4.chr19 59813911 101 + 63644993 AGTAAACACCCAAGCATGAGTGACAACCAATCAAAGTAATATCTTCCCAATGACCACACTTTTCCAGATGACGTCAAGCCACAGAAGGCCCTGAAAATCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56727643 93 + 60714840 AGTAAACACCCAAGCGTGAGTGACAACCAATCAAAGTAATATCTTCCCAATGACCACACTTTTCCAG--------AAGCCACAGAAGGCCCTGAAAATCCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60555259 101 + 64156825 AGTAAACACGCAAGCATGAGTGACAACCAAGCAAAGTAATATCTTCCCAATGACCACACTTTTCCAGATGGCGTCAAGCCACATAGGGCCCTGAAAATCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55681968 101 + 59248254 AGTAAACACGCAAGCATGAGTGACAACCAAGCAAAGTAATATCTTCCCAATGACCACACTTTTCCAGATGGCGTCGAGCCACATAGGGCCCTGAAAATCCA i macFas5.chr19 C 0 C 0 s canFam3.chr1 19970823 93 - 122678785 CGTAAACATAC---CTTGAATGGCAGCCAATCAGAG-----TCCCCCTCAAAAAAACATTTTTACAGATGATACCAAACTACAAGAGGCCCTGAGAAACCA i canFam3.chr1 C 0 I 1106 e calJac3.chr22 45865945 4013 + 49145316 I e nomLeu3.chr10 103273311 140 - 106955855 I e chlSab2.chr6 47514492 498 + 50890351 I e papAnu2.chr19 47794979 3132 + 51301725 I a score=75781.000000 s hg38.chr19_GL949747v2_alt 537690 88 + 729520 ACAATCTCTGAAGTATACATTTCCCAggctgagcgcagtggctcacacctgaaatcccagcactttgggaggctaaggcaggcagatc s panTro4.chr19 59814012 88 + 63644993 ACAATCTCTGAAGTATACATTTCCCAggctgagcgcagtggctcacacctgaaatcccagcactttgggaggctaaggcaggcagatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56727736 88 + 60714840 ATAATCTCTGAAGTATACATTTCCCAGgccgggcgcagtggctcacacctgaaatcccagcactttaggaggctgaggcagggagatc i ponAbe2.chr19 C 0 I 6959 s rheMac3.chr19 60555360 88 + 64156825 ACCATCTCTGAAGTATACATTTCCCAggccgggcgcagtggctcacacctgcaatcccagcactttgggaggctgaggcgggcggatc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55682069 88 + 59248254 ACCATCTCTGAAGTATACGTTTCCCAggccgggcgcagtggctcacacctgcaatcccagcactttgggaggctgaggcgggcggatc i macFas5.chr19 C 0 C 0 e canFam3.chr1 19970916 1106 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I e nomLeu3.chr10 103273311 140 - 106955855 I e chlSab2.chr6 47514492 498 + 50890351 I e papAnu2.chr19 47794979 3132 + 51301725 I a score=256661.000000 s hg38.chr19_GL949747v2_alt 537778 541 + 729520 acgaggccaggagttcgagaccagcctggccaacatggcaaaaccccgtctctactaaaaatacaaaaattagccaggtgtggtggcacgcacctgcattaccagctactgaggaggctgaggcaggagaatggcttgaacccaggaggcggaggttgcagtgagccaagatcgtaccaccgcactccagccttggtgacagagcaagactccatct------caacaacaacaacaaaaaTGGTTGAAATAAAACTTCTATGTGTTGAACGATTCCTCTTTtaggcatagagtttcagttttacaagatgaaaatattctggagatctgtttcaaaacaccgtgaatacatttaacactgctatactgtacacttacaa-tggctaagatggtaaattgtatgttatgtttttactacaatttttttt-----ttttttttttttgagacagagtctcactcttgttgcccaggctggagtgcaatggcgcggtctcggctcaccgcaacctccgcctcctgggctcaagccattctcctgcctcagcctcc s panTro4.chr19 59814100 538 + 63644993 acgaggccaggagttcgagaccagcctggccaacatggcaaaaccccatctctactaaaaatacaaaaattagccaggtgtggtggcacgcacctgcattaccagctactgaggaggctgaggcaggagaatggcttgaacccaggaggcggaggttgcagtgagccaagatcgtaccaccgcactccagccttggtgacagagcaagactccatct------caacaacaacaacaaaaaTGGTTGAAATAAAACTTCTATGCGTTGAACGATTCCTCTTTtaggcatagagtttcagttttacaagatgaaaatattctggagatctgtttcacaacactgtgaatacatttaacactgctatactgtacacttaaaa-tggctaagatggtaaattgtatgttatgtttttactaca---tttttt-----ttttttttttttgagacagagtctcactcttgttgcccatgctggggtgcaatggcgcggtctcggctcactgcaacctccgcctcctgggctcaagccattctcctgcctcagcctcc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60555448 535 + 64156825 acgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtgtctactaaaaatacaaaaattagctaggtgtggtggtgggcgcctgtagtaccggctactgagggggctgaggcaggagaatggcttgaacccgggaggcagaggttgcagtgagccgagatcgcaccactaaactccagcctgggcgacagagcaagactccatctcaaaaacaacaacaacaacaaaaaTGGTTAAAGTGAAACTTCTATGTGTTGAACAATTCCTCTTTTAGGCATAG---------------agatgaaaatattctggagatccatttcacaacaccgtgaatacatttaacactactatactgtacacttaaaagtggctaagatggtaaattgtatgttatgctttcactaca---attTTTAAAACttttttttttccgagatggagtctcactcttgtcgtccaggttggagtgcagtggtgtgatttcggctcactgcaacctctgtctccctggttcaagtgattctcctgcctcaacctcc i rheMac3.chr19 C 0 I 1653 s macFas5.chr19 55682157 535 + 59248254 acgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtgtctactaaaaatacaaaaattagctaggtgtggtggtgggcgcctgtagtaccggctactgaggaggctgaggcaggagaatggcttgaacccgggaggcagaggttgcagtgagccgagatcgcaccactaaactccagcctgggcgacagagcaagactccatctcaaaaacaacaacaacaacaaaaaTGGTTAAAGTGAAACTTCTATGTGTTGAACAATTCCTCTTTTAGGCATAG---------------agatgaaaatattctggagatccatttcacaacaccgtgaatacatttaacactactatactgtacacttaaaagtggctaagatggtaaattgtatgttatgctttcactaca---attTTTAAAACttttttttttccgagatggagtctcactcttgtcgtccaggttggagtgcagtggtgtgatttcggctcactgcaacctctgtctccctggttcaagtgattctcctgcctcaacctcc i macFas5.chr19 C 0 I 1460 e canFam3.chr1 19970916 1106 - 122678785 I e ponAbe2.chr19 56727824 6959 + 60714840 I e calJac3.chr22 45865945 4013 + 49145316 I e nomLeu3.chr10 103273311 140 - 106955855 I e chlSab2.chr6 47514492 498 + 50890351 I e papAnu2.chr19 47794979 3132 + 51301725 I a score=556562.000000 s hg38.chr19_GL949747v2_alt 538319 6348 + 729520 agagcagctgggattacaggcatgcgccaccacgcctggctaattttatatttttagaagagacggggtttctccatgttggtcaggctggtctcgaactctggacctcaggtgatccacccgccttggcctcccaaagtgctgggatcacaggcgtgagccaccacgcctggcctacaatttttttttaacttttttttctgagatggagtctcgctcttgtcacccaagttggagtgcagtagtgtgatctcggctcactgcaacctctgcctccctggttcaagggattctcctgcctcaacctcccaagtgtgggagatcagtcagagtagcagaagaaattataggaataggaagcagcaaaccttcttggaaggccagggaggttggcatagcttcagatagtttggctgaaagcagccagattctcttttcaggagccaaacagcttagggcgcagatagaaaggaatgcggagtattttatctaaatagcttgcttagtcatatggtcctaaaatcaacctttgatcattctcgggcaagatggccctctccagggaggtggcgg----ggggcggtgaccaggttaattacccacaggtgtgttgactcaaagcctttgttaattaaatctgtgctaaataaatgcaagcgttgccagcttagaggggctgcactctctttggctcctagtgccggcagccccctggcctgctctttcactgaatattggtgtctgaggacgtgtctcatctgtcgtacagctgggatctgcagaacagatcccccccgcacccaagaagctgggattacaggcacccgccgccacgcccagctcatttttgtatttttagtagagacagggtttcaccatgttggtcaggccggtctcgaactcccggcctcaggtgatctgcccgcctcagcctcccaaaagtgcttggattacaggcatgagccactgcgCCTGGCCTTagaaaacttctttttcttttttttttttttttgagacagagtttcactctgtcgctacgctggtgtgatctgggctcactgcaatctccgcctcccaggttcaagtgattcccctgcctcagcctcccgagtagctggaactacaggtgcgcaccgccacgcccggctaatttcttgtattttcgtggagacggggtttcaccatgttggctaggCTGGTCTGTTtcatgcgcgtccgtgtgaagagaccaccaaacaggctctgtgtgagcagcaaggctgtttatttcacctgggtgcaggcaggctgagtccgacaagagagtcagcgaagggggataggggtggggccgttttataggatttgggtaggtaaaggaaaattacagtcaaaggggggttgttctttggtgggcaggagtggggggtcacaaggtgctcagtaggggagcttttgagtcaggatgaaccagaagaaggaatttcacaagacaatgtcatcagttaaggcaggaactggccatctggatgtgtacgtgcaggtcacaggggatatgatggcttagcttgggctcagaggcctgacattcctgtcttcttatattaataagaaaaataaaacgaaatagtggtaaagtgttgggatggcgaaaattttggggggtggtatggagagataatgggcgatgtttctcagggctgcttcgagcgggattaggggcggcgtgggaacctagagtgggagcgattaagctgaaggaagattttgtggtaaggggtgatattgtgggattgttagaagaaacatttttcatttagaattactggtgatggcctggatgcagttttgtatgaattgaaaaactaaatggaataaggaaaggagaaaaacaggtattaaaggtctaagaattgggaggacctaggacatctaattagagagtgcctaaggaggttcagcatagccttgccagcaaagattatttatttacttcaagagttaagagtggtggtttggggatagcaccaggagatatcagctgtgatggcttggaaaaacagtgtaaaccagcagtgtaaacaagagcagggcatgtgtgagtagttgagaatggtgaataggagtatgactagacagaagatagtagggatgacaagttttttggggcacaaTctaagttggtctggtgtctggaatgagactggggcttaataaaaaggagtgtctatacaggagctcaaatgtgctgtaccttgtagcattctgaggacaggcctgaattctgagaaaagaaagtggtaaaagtattgtccagtcttttttaagttggtggctgagcttggtgaggtgtgtttttaatagaccattagtccgttctacctttcctgaagactgaggactgtaagggatataaaggtttcactgaataccaagagcctgaaaaactgcttggctgatttgactaataaaggccggtctgctatcagactgtatagaggtgggaaggccaaactgtggaattatgtctgacaggagggaagaaatgacctcggtggccttctcagaccctgtgggaaaggcctctacccatccagtgaaagtgtctacccagaccaagaggtattttagtttcctgactcagggcatgtgagtgaagtcaatttgccagtcctaggcgggggcaaatccccgagcctgatgtgtagggaagggaggggacctgagcaatccctgaggggtagtagaatagcagatggaacactgagaagtggtttccttgaggatagatttccaggatggaaaggaaatgagaggttctaagagatgggctagcagcttgtaacctacatggaagaggctatgaaatatcgaccgaatagaatgggcctgtgaggctggaaggaggtattttccttggtctaagaaccatttgccttgtgtgggaagagattgatgggtggaagtttcagtgggggagtaggtgggagtgactgatgagaaggagaaaaactggctgtgggggacagaaattggcatgctagctgcttgtctagctaccttatcagcataagcatagatgtgagagacagaagttggaaagctagctgcttgtctagccaccttgtcagcataggcattgtctagagcaatgggatctgatgacttttgatggcctttgcagtgaatgactccagcttcctctgggagtaaagtggccttgagcagagtttttattaaggaggcattaaagatggaggacccttgtgtagtgaggaaacctctttcagcccatatgaccgcatggtggggcagaatatgaaaggcatatttagagtcagtataaatattgatgcatagtccttttgcatcagtgagggcttgagttaaggcaactaattcggcttgctgagaggtagtggagggggcagagcggtagcctcaatgatagatgtggaagatactatagcatagcctgcctttgctggtgagtggcgattaggcctggtggaactgccatcaataaactaaatgtgattagggtgaggaataggaaagaaggaaatgtggggaaatggggtgaatgtcaggtggatcagagagatacagtcatgggggtcaggtgtggtatccggaataatgtgggaggccggattgaagtatgggccagtaacaatggtaattgtgggagactcaacaaagagtgagtacagctgaaggagccggggagcagaaagtatatgcgtcaggtgtgaggaagaaaatagatttttggaagttatgagaactgtagagagtgagttgagcatagtttgtgattttgagggcctctaaaactattaaagcagcggcagccgctgctcacagacgtgagggctaggctaaaacagtaagatcaagttgtttggacagaaaggctacagggtgcggtcctggctcttgtgtaagagttctgaccacgctaaccatgcctaggaaggaaaggagttgttgttttgtagaaggtgctggggtttgagagatcactaggacacgattggcagggagagcacgtgtgtttttatgagaattatgccgagataggtaacagaggaggaagaaatttgggcttgactgaagtaatgggggctgtctgtgaagccttgcagcagtacagcctaggtaatttgctgagcttgatcggtgtcagggtcagtccaagtgaaagcgaagagaggctgggatgaagggtgcaaaggaacagtaaagaaagcatgtttgagatccagaacagaataatgggttgtagaggcaggtattgaggataggagagtatatgggtttggcactacggggtggataggcaaaacaatttggttgataaggtgcagatcctgaactaatgtgtaagccttgtctggttttaggacaggtaaaatgggagaattgtaaggggagtttataggctttaaaaggccatgctgtagcaggctttaatccttttaaagcatgctgtgggatgggatattggcgttgagcggggtaaggttgattaggttttaatgagatggtaaggggtgcatgattggtcaccaaggagggagtagaggtatcctatacttgtgggttaaggtggggggatacaagaggaggacacaaaggaggctttggattgggaagaagggcagcaatgagatatagctgtagtccaggaatagtcagggaagcagataatttagttaaagtgtctcagcctaataagggaactgggcaggtggggataactaaaaaggagtgcttgaaagagtattgtctaagttggcaccagagttggggagttttaagaggtttagaagcctagctgtcaatacctacaacagttatggaggcaagggaaacaggcccttgaaaagaaggtaatgtggagtgggtagcctccatattgattaagaaggggacgggcttaccttccactgtgagagttacctagactgtctgtgatggtcctgtaggcttccgaggcgatcgggatcgggcagtgtcagtcttcagctgctaagccgagaagatctgggaaggagtcagagagccttgggccagagttctagctgctctgggagtggctgccaggtgagttgaacagtccgattttcagtggggtcccgcacagatgggatgcggcttaggaggaatcccaggctgtggacattccttggcccagtggccagatttccagtacttgtagcaagctcctgggggaagaggttctggaggaacccctggcagctgcggttcaggcgtttggagttctcgtgtgctggagatgtggctggggtttgtctcatctggatactggagtggaggcaaggaattgcaactcagaaatatgttgctatttggctgcctctactctattactgtacaccttgaaggcgaggttaattaagtcttgttgtggggtttgagggacagaatttaatttttggagctttatttaatgttgggagcagatttggtaataaaatgtatattgagaataagacggccttttgacttagggtctagggctgtaaagcgtctcagggttgctgccaaatgagccatgaactgggctgtgtttttaaatttgatgaaaaagagcctaaacactatctgatttgggagaggtcagataaagaaaaaggagcattaaccttgactatgcctttagcttcagccacctttttaagaggaaattgctgggcagttgggggagggctagtcatggaatggaactgtaagctggaccgggtgtgaggaggggaggtgataaaaggattatagggtggaggagcggaggctgaggaagaattgggacctagctcggcctggcgaggaggggagatgtcagatgggtctgtagaaaaggaagattagaaagactcagcgatgcttggggttgggactgacgggacaggcgggagggaaagaaggaagatttgggacgagttgcactgggcatagagactagggagggaccgatgtgtaaaagaatgcctggatgtcaggcacctcagaccgtttgcccattttacaacaagaattatttagatcttgtaggatggaaaaattgaaagtgccgttttctggctatttggaaccactgtcaagtttgtattggggtcaagcagcattgcagaagaaaataaggcatttaggttttaggtcaggtgtgagttgaagaggttttaggtttttaagaacacaggctaagggagaagaaggaggaatggagggtggaaggttgcccatactgaaggaggcaagcacagagaaaagagagagtagagacatggagggaaggggttcaggggttcttaccttccagaaaagcgggaaaggggtcagggcaca s panTro4.chr19 59814638 6249 + 63644993 agagcagctgggattacaggcatgcgccaccacgcctggctaattttatatttttagaagagacggggtttctccatgttggtcaggctggtctcgaactctggacctcaggtgatccacccgccttggcctcccaaagtgctgggatcacaggcgtgagccaccacgcctggccTACAAttttttttaactttttttttctgagatggagtctcgctcttgtcacccaagttggagtgcagtagtgtgatctcggctcactgcaacctctgcctccctggttcaagggattctcctgcctcaacctcccaagtgtgggagatcagtcagagtagcagaagaaattataggaataggaagcagcaaaccttcttggaaggccagggaggttggcatagcttcagatagtttggctgaaagcagccagattctcttttcaggagccaaacagcttagggcgcagatacaaaggaatgcggagtattttatctaaatagcttgcttagtcatatggtcctaaaatcaacctttgatcattctcgggcaagatggccctctccagggaggtgggggcgggggggcggtgaccaggttaattacccacaggtgtgttgactcaaagcctttgttaattaaatctgtgctaaataaatgcaagcgttgccagcttagaggggctgcactctctttggctcctagtgccggcagccccctggcctgctctttcactgaatattggtgtctgaggatgtgtctcatctgtcgtacagctgggatctgcagaacagatcccccccgcacccaagaagctgggattacaggcacccgccaccacgcccagctaatttttgtatttttagtagagacagggtttcaccatgttggtcagcctggtctcgaactcctggcctcaggtgatctgcccgcttcagcctcccaaaagtgcttggattacaggcatgagccactgcgcctggccTTAGAAAACtttttttt----tctttttttttttgagacacagtttcactctgtcgctacgctggtgtgatctgggctcactgcaatctccgcctcccaggttcaagtgattcccctgcctcagcctcccgcgtagctggaactacaggtgcgcactgccacgcccagctaatttcttgtattttcgtagagacggggtttcaccatgttggctaggctggtctGTTtcatgggcgtccatgtgaagagaccaccaagcaggctctgtgtgagcaacaaggctgtttatttcacctgggtgcaggcgggctgagtccgaaaagagagtcagcgaagggagat-ggagtggggccattttataatatttggggaggtaaaggaaaattacaatcaaagtggggtt---ctttggggggcaggagtggggg-tcacaaggtgctcagtaggggagcttttgagccaggatgagccaggagaaggaatttcacaagacaatgtcataagttaaggcaggaaccggccatctggatgtgtacgtgcaggtcacaggggatatgatggcttagcttgggctcagaggcctgacattcctgtcttcttatattaataagaaaaataaaatgaaataggggtaaagtgttgggacggcgaaaattttggggggtggtatggagagataatgggcgatgtttctcagggctgctttgagcgggattaggggcggcgtgggaacctaaagtgggagcgattaagctgaaggaagattttgtggtaaggggtgatattgtggggctgttagaagaaacatttgtcatttagaattattggtgatggcctggatgcagttttgtacgaattgaaaaactaaatggaataagagaaggtgaaaaacaggtattaaaggtctaagaattgggaggacctaggacatctaattagag--tgcctaaggaggttcagcatagtcctgccagcaaagattatttattta-----agagttaagagtggcggtttggggatagtaccaggagatatcagctgtgctggcttagagaaacagtgtaaac-------------aagagcagggcatgtgtgagtagttgagaacagtgaataggagtatgactagacagaagatagtaaggatgacaagtttttgggggcacattccaagtTggtctggtgtctggaatgagactggggcttaataaaaaggagtgtcgatacaggagctcaaatgtgctgtaccttgtagcattccgaggacaggcctgaattctgagaaaagaaagtggtaaaagtattgtccagtcctttttaagttggtagctgagcttggtgaggtgtgtttttactagaccattagtctgttctacctttcctgaagactgaggactgtaaaggatataaaggtttcactgaa--ccaagagcctgaaaaaatgcttggctgatttgactaataaaggctggtccgttatcagactgcatagaggtgggaaggccaaaccgaggaattatgtctgacagaagggaagaaatgacctcggtggccttctcagaccctgtgggaaaggcctgtacccatccagtgaaagtgtctacccagaccaagaggtattttagtttcctaactcggggcatgtgagtaaagtcaatttgccagtcctgggcgggggcaaatccccaagcctgatgtgtagggaggggagggggcctgagcaatccctgagaggtagtagaatagcagatggaacactgagaagtggtttccttgaggatagatgtccacgaaggaaaggaaatgagaggttctaagagatgggctagcagcttgtaacctacatggaagaggctatgaaatgtcgacagaatagaatgggcctgtgaggctggaaggagatattttccttggtctgagaactatttgccttgtgtgggaagagattgatgggtggacgtttcagcgggggagtaggtgggagtgactgatgagaaggagaaaaactggctgtgagggacagaa---------------------------------------------------------------gttggaatgctagctgcttgtctagccaccttatcagcataggcattgtctagagcaatgggatctgacgccttttgatggcccttgcagtgaatgaccccagcttcctttggaagtaaagcggccttgagcagagtttttattaaggaggcattaatgatggaggacacctgcgtagtaaggaaacctctttcagcccatataacagcatggtggggcagaatatgaaaggcatatttagagtcagtataaatattgacgcgtagtccttttgcaacagtgaggacttgggttaaggcaactaattcgtcttgctgagaggtagtggagggggcagagcggtagcctcaatgatagatgtggaagatactatagcatagcctgcctttgctggtgagtggcgattaggcctggtggaactgccatcaataaactaaatgtgattagggtgaggaacaggaaagaaggaaatgtggggaaatggggtgaatgtcaggtggatcagagagatacagtcatgggggtcaggtgtggtatctggaataatgtgggaggccggattgaagtctgggccagtaacaatggtaattgtgggagactcaacgaagagtgagtatagctgaaggagccgggaaacagaaagtatatgtgtcaggtgtgaggaagaaaatagatttttggaagttatgagaactgtagagagtgagttgagcatagtttgtgattttgagggcctctaaaagtattaaagcagcggcagccgctgctcacagacatgagggctaggctaaaacagtaaggtcaagttgttcggacagaaaggctacagggtgcggtcctggctcttgtgtaagagttccgaccgcgctaaccatgcctaggaaggaaaggagttgtt---ttgtagaaggtgctggggtttgagagatcagtcagacacgatcggcgtggagagcacgtgtgtttttatgagaattatgccgagataggtaacagaggaggaggaaatttgggcttgactgaagtaatgggggctgtctgtgaagctttgcggcagtacagcctaggtaatttgctgagcttgatgggtgtcagggtcagtccaagtgaaagcgaagagaggctgggattaagggtacaaagcaatagtaaagaaagcatgtttgagatccagaacagaataatgggtggttgagggaggtattgaggataggagagtatatgggtttggcaccacggggtggataggcaaaacaatttggttgataaggtgcagatcctgaactaatgtgtaagccttgtctggttttaggacaggtaaaatgggggaattgcaaggagagtttataggctttaaaaggccatgctgtagcgggctttaatccttttaaagcgtgctgtgggatgggatattggcattgagcggggtaagggtgattaggttttaatgagatggtaaggggtgcatgatcggtcaccaaggagggagtagaggtatcttatacttgtgggttaaggtggggggatacaagaggaggacgcaaaggaggctttggattgggaagaagggcggcaatgagatacagctgtggtccaggaatagtcagggaagcagataatttagttaaagtgtctcagcctaataagggaactgggcaggtggggataactaaaaaggagtgcttgaaagagtattgtctaagttggcaccagagttggggagttttaagaggtttagaagcctagctgtcaatacctacaacagttatggaggcaagggaaacgggcccttgaaaagaaggtaatgtggagtgggtagcctccatattgattaagaaggggacaggcttaccttccactgtgagagttacctagactgtctgtgatggtcctgtaggcttccgaggtgatcggg------cagtgtcagtcttcagctgctaagccgagaagatctgggaaggagtcagagagccttgggccagagttctagctgctctgggagtggctgccaggtgagttgaacagtccgattttcagtggggtcccgcacagatgggacgcggcttaggaggaatcccaggctgtggacattccttggcccagtggccagatttccagtacttgtagcaagctcctgggggaagaggttctggaggaaaccctggcagctgcggttcaggcgtttggagttctcgtgtgctggagatgtggctggggtttgtctcatctggagactggagtggaggcaaggaattgcaactcagaaatatgttgctacttggctgcctctactctattattgtacaccttgaaggcaaggttaattgagtcctgttgtggggtttgagggaccgaatttaatttttggagctttatttaatgtcgggagcagatttggtaataaaatgtattttgagaataagatggccttttgacttagggtctagggctgtaaagcatctcagggttgctgccaaacaagccatgaactgggctgtgtttttaaatttgatgaaaaagagcctaaacactatctgatttgggagaggtcagataaagaaaaaggagcattaaccttgactatgcctttagctccagccacctttttaagaggaaattgctgggcagttgggggagggctagtcacggaacggaactgtaagctggaccgggtatgaggaggggaggtgataaaaagattacagggtggaggagcggaggctgaggaagaattgggacccagcttggcctggcaaggaggggagatgtcagatgggtctgtagaaaaggaagattagaaagactcagcgatgcttggggttgggactgacgggacaggcgggagggaaagaaggaagatttgggatgagttgcactgggcacagagactagggagggaccgatgtgtaaaagaatgcctggatgtcaggtacctcagaccgtttgcccattttacaacaagaattatttatatcttgtaggatggaaaaattgaaagtgccgttttctggctatttggaaccactgtcgagtttgtattggggtcaagcagcattgcagaagaaaataaggcatttaggttttaggtcaggtgtgagttgaagaggttttaggtttttaagaacacaggccaagggagaaggaggaggaatggagggtggaaggttgcccatagtgaaggaggcaagcacagagaaaagagagagtagagacacggagggaaggggttcaggggttcttaccctccagaaaagcgggaaaggggtcagggcaca i panTro4.chr19 C 0 C 0 e canFam3.chr1 19970916 1106 - 122678785 I e ponAbe2.chr19 56727824 6959 + 60714840 I e calJac3.chr22 45865945 4013 + 49145316 I e nomLeu3.chr10 103273311 140 - 106955855 I e chlSab2.chr6 47514492 498 + 50890351 I e papAnu2.chr19 47794979 3132 + 51301725 I e macFas5.chr19 55682692 1460 + 59248254 I e rheMac3.chr19 60555983 1653 + 64156825 I a score=273863.000000 s hg38.chr19_GL949747v2_alt 544667 1104 + 729520 gaagtaagggattggggtgcagagacaagaggtcggggtgtggaaataagggatcggggtgcagagataagacgtcagggcacagaaataagggatcgggggattcttgccccctagaaaagcggtacttgccactaagggtgaaggagaaggggttggggggttcttgcccccccagaaaagcagagaaggggtagagacac--agagaaggagttgggggttcttgcccccccagaaaagcagtacttgccactaagggtgaaggaccaaggcaggcatccccatgtggtcagacacctctgaaacgtgggtgaataatcagagaggtgtccccgcgtgattaaacaccaagggaaggctgccttcccgagtccatgaccggtgctggagttttgggtccacgaataaagcgcgtctcctgtctctaccagaaaaggaaaggaactgaaattaagagaagggagagattgaagagtg-----------gaaaggagaaagtggttgagggatagtgagagaggttggagaagagagtaaaaagaggctgcttactggatttaaaattggtgagatgttccttgggctggttggtctgaggacgagaggtcgtaggtggatctttctcatggagcaaagagcaggaggacaggggattgatctcctaaggaagatcccctgattcgagttatggCACCAAATTtcactcacgtccgtgtgaagagaccaccaaacaggatttgtgtgagcaacaaggctgtttatttcacctgggtgcaggcgggctgagtccagaaagagagtcagcaaagggagataggagtgcggccgttttataggatttgggtaggtaaaggaaaattacagtcaaaaggggg-ttgttctctggcgggcaggagtggggttcacaaggtgctcagtaggggagcttttgagccgggatgagccaggagaaggaatttcataagataatgtcatcacttaaggcaagaacaggccattttcatttctttcgtggtggaatgtcatcagttaaggcaggaaccggccatctggatgtgtacatacaggccacagggggatatgatggcttagcttgggctcagaggcctgaca s panTro4.chr19 59820887 1090 + 63644993 gaagtaagggattggggtgcagagataagaggtcggggtgtggaaataagggatcggggtgcagagataagaggtcggggcacagaaataagggatcagggggttcttgccccctagaaaagcagtacttgccactaaggatgaaggagaaggggttggggggttcttgcccccc-agaaaagcagagaaggggtagagacac--agagaaggagttgggggttcttgcccccccagaaaagcagtacttgccactaagggtgaaggaccaaggcaggcatccccgtgtggtcagacacctctgaaacgtgggtgaataatcagagaggtgtccccgcatgattaaacaccaagggaagactgccttcccaagtccatgacctgcgctggagttttgggtccacgaataaaacgcatctcctgtctctaccagaaaaggaaaggaactgaaattaagagaagggagaaactgaagggtg-----------gaaaggagaaagtggttgagggacagtgagagaggttggagaagagagtaaaaagaggctgcttactggatttaaaattggtgagatgttccttgggctggttggtctgaggaccagaggtcgtaggtggatctttctcatggagcaaagagcaggaggacaggggattgatctcct--------------gattcgagtcatggcaccaaaTTtcactcacgtccatgtgaagagaccaccaaacaggctttgtgtgagcaacaaggctgtttatttcacctgggtgcaggcgggctgagtccaaaaagagagtcagcaaagggagataggggtggggccgttttataggatttgggtaggtaaaggaaaattacagtcaaaaggggggttgttctctggcgggcaggagtgggggtcacaaggtgctcagtaggggagcttttgagccaggatgagccaggagaaggaatttcacaagataatgtcatcagttaaggcaagaacaggccattttcatttctttcgtggtggaatgtcatcagttaaggcaggaaccagccatctggatgtgtacgtgcaggccacagggggatatgatggcttagcttgggctcagaggcctgaca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56734783 1110 + 60714840 gaaataagggatt-gggtgcagagataagaggtcagggtgtggaaataagggatcggggtgcagagataagaggttggggcacagaaataagggattgggaggttcttgccccctagaaaaatggtacttgccactaagggcaaaggagaaggggttggggggttcttgcccccc-agaaaagcagagaaggggtagagacatggagagaaggagttgggggtttcttgccccccagaaaagcagtacttgccgctaagggtgaaggaccaaggcaggcgtccccgcgtggtcagacacctctgaaacgtgggtgagtaatcaggcaggcgtccctgtgtgattaaacaccaagggaagactgtcttcccgagtccgtgaccggcaccggagttttgggtccatggataaaacgcgtctcctgtctctaccagaaaaggaaaggaactgaaattaagagaagggaaagattgaagggtggcgccaagattgaaaggacaaagtggttgagggatagtgagagaggttggagaagacagtaagaagaggctacttacccaatttaaacttggtgagatgtttcttgggctggtgggtctgaggacccaaggtcgtaggtggatctttttcacggagcaaagagcaggaggacaggggattgatcttccaagggaggtcccccgatctgagtcacggcaccaaaTTtcatgcgcgtccatgtgaagagaccaccaaaaaggctttgtgtgagcaacatggc-gtttatttcacctgggggcaggcaggttgagtccaaaaagagagtcagcaaagggagatgggggtggggccattttataggatttgggtaggtaaaggaaaattacagtcaaagggggg-ttgttctctggcgggcaggagtgggggtcacaaggtacccagtgggggagcttttgagccaggatgagcc---agaaggaatttcacaagacaatgtcatcagttaaggcaagaacaggccattttcacttcttttgtggtggaatgtcatcagttaaggcaggaactggccatctggatgtgtacatgcaggccaca-ggggatatgatggcttagcttgggctcagaggcctgaca i ponAbe2.chr19 I 6959 C 0 e canFam3.chr1 19970916 1106 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I e nomLeu3.chr10 103273311 140 - 106955855 I e chlSab2.chr6 47514492 498 + 50890351 I e papAnu2.chr19 47794979 3132 + 51301725 I e macFas5.chr19 55682692 1460 + 59248254 I e rheMac3.chr19 60555983 1653 + 64156825 I a score=5623.000000 s hg38.chr19_GL949747v2_alt 545771 10 + 729520 gtctggatca s panTro4.chr19 59821977 10 + 63644993 gtctggatca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56735893 10 + 60714840 gtctggatct i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55684152 10 + 59248254 gtctctatct i macFas5.chr19 I 1460 C 0 s papAnu2.chr19 47798111 10 + 51301725 gtctctatct i papAnu2.chr19 I 3132 C 0 e canFam3.chr1 19970916 1106 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I e nomLeu3.chr10 103273311 140 - 106955855 I e chlSab2.chr6 47514492 498 + 50890351 I e rheMac3.chr19 60555983 1653 + 64156825 I a score=112739.000000 s hg38.chr19_GL949747v2_alt 545781 64 + 729520 cctgacctggtgatccgcacacctcggcctcccaaagtgctgggattacaggcatgacccactg s panTro4.chr19 59821987 64 + 63644993 cctgacctggtgatccacgcacctcggcctcccaaagtgctgggattacaggcatgacccactg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56735903 64 + 60714840 cctgacctggtgatccgcccacctcggcctcccaaagtgctgggattacaggcatgacccactg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60557636 64 + 64156825 cctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccacca i rheMac3.chr19 I 1653 C 0 s macFas5.chr19 55684162 64 + 59248254 cctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccacca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47798121 64 + 51301725 cctgacctcgtgatccgccaacctcagcctcccaaagtgctgggattacaggcgtgagccacca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47514990 64 + 50890351 cctgacctcgtgatccgcccacctcagcctcccaaagtgcagggattacaggcgtgagccaccg i chlSab2.chr6 I 498 C 0 e canFam3.chr1 19970916 1106 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I e nomLeu3.chr10 103273311 140 - 106955855 I a score=1408305.000000 s hg38.chr19_GL949747v2_alt 545845 706 + 729520 caCCTGGCCTTAGAAAACTTCTTAAATATTAAAATGTATGTTATGTGTATTTTGCCACAATTTTTGAAAAGTACCTTCtggtgtttagagacagaagatgagtggttgcctagggccgggagagtgaggggatcgtggtgatgggcagctggtcggcatggggttctgaagggcagtgatgacaacattctaaaattagactgtgttgacggttgcaccaactccgtgaataccacaaaatttaaaccattgaattatgcacttttaatgggtaattgtatggcatgtaaattatatctcaataAAGTTATATTTTTAAATACCAAAAAAAggccgggtgcggtggctcacgcctgtaatcccagcactttgggaggccgagaagggcggatcacgaggtcaggagatggagaccatcctggctaacatggtgaaaccccatctctact---ttgaaaaaaaa----aaaaaaaaaaaaaagattacccggacgtggtggtgggcacctgtagtcctagctactcaggaggctgaggcaggagaatggcataaactcgggaggcagagcttgcagtgagtcgagattgcgccactcaggaggctgaggcaagagaatggcataaaccccggaggcagagcttgcagcgagccgagattgcgccactgcactccagcatgggtgacagagcgagagtccatctc------aaaaaaaaaa s panTro4.chr19 59822051 635 + 63644993 cacctggccTTAGAAAACTTTTTAAATATTAAAATGTATGTTATGTGTATTTTGCTACAATTTTTGAAAAGCACCTTCTGGTGTTtagagacagaagatgagtggttgcctagggccgggagagtgaggggatcgtggtgatgggcagctggtcggcatggggttctgaagggcagtgatgacaacattctaaaattagactgtgttgacggttgcaccaactccgtgaataccacaaaatttaaaccattgaattatgcacttttaatgggtaattgtatggcatgtaaatcatatctcaataaagttatATTTTTAAATACCAAAAAAAggccgggtgcggtggctcacgcctgtaatcccagcactttgggaggccgagacgggcggatcacgaggtcaggagatggagaccatcctggctgacatggtgaaaccctgtctctact---ttggaaaaaaa----aaaaaaaaaaaaaagattacccagacatggtggtgggcacctgtagtcctagctactcaggaggctgaggcaggaaaatggcataaacccgggaggcagagctt-----------------------------------------------------------------------gcagtaagctgagattgcgccactgcactccagcatgggtgacagagcgagactctgtctc------aaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56735967 628 + 60714840 tacctggccTTAGAAAACtttttaaatattaaaatttatGTTATGTATATTTTGCCACAGTTTTTGAAAAGTGCCTTGTGGTCTTtagagacagaagatgagtggttgcctaggaccgggagagtgaggggatcatggtgacgggcagctgatcggcatggggttctgaagggcagtgatgacaacattctaaaattagattgtgttgatggttgcaccaactctgtgaataccacaaaatttaagccattgaattgtgcacttttaatgggtaattgtatggcatgtaaattatatctcaacaaagttatATTTTTAAATACCAAAAAAAggccgagtgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggcagatcatgaggtcaggagatggagaccatcctggctaacatggtgaaaccccatctctact---tt-------aa----aaaaaaaaaaaaaagattacccggacgtggtggcaggtgcctatagtcctagctactccagaggctgaggcaggagaatggcatgaacccgggaggcagagctt-----------------------------------------------------------------------gcagtgagccgagattgcgccactgcactcctgcatgggtgacagagcaagactccttctc------aaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103273451 630 - 106955855 CACCTGGCCTTA-AAAACTTTTTAAATATTAAAATTTATGTTATGTATATTTTGCCACAATTTTTGAAAAGTACCTTGTGGTCTTtagagacagaagatgagtggttgcctggggctgggagagtaaggggatcgtggtgatgggcagctgatcggcatggggttctgaagggcagtgatgacaacattctaaaattagactgtgttgacggttgcaccaactctgtgaataccacaaaatttaagccattgaattatgcacttttaatgggtaattgtatggcatgtaaattagatctcaataaagttatATTTTTAAATACCAAAAAAAggccgggtgcagtggctcacgcctgtaatcccagcactttgggaggccgagacaggcagatcacgaggtcaggagatggagaccatcctggctaacatggtgaaaccccgtctctatc---tt----aaaaa----aaaaaaaaaaaaaagattacccggacgtggtggtgtgcacctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaatctggga-----------------------------------------------------------------------ggcagagcttgcagtgagctgagattgcgccactgcactccagcatgggtgacagagcaagactgcttctc------agaaaaaaaG i nomLeu3.chr10 I 140 C 0 s rheMac3.chr19 60557700 638 + 64156825 cacctgAACTTAGAAAACTTTATAAATATTAAAATTGATGTTATGTATATTTTGCCACAATTTTTGAGAAGTACCTTGTGGTCTTTAGagagagtagatgagtggttgcctagggccgggaaagtgaggggatcatggtgatgggcagctgatgggcctggggttctgaagggcagtgatgacaacattctaaaattagactgtgttgacggttgcaccaactctttgaataccaccaaatctaagccattaaattatgcatttttaatgggtaattttatggcatgtaaattatatctcaatcaagttgtatttttaaaTACCAAAAAAAggccaggtgcggtggctcacacctgtaatcccagcactttgggaggccgagacaggcggatcacaaggtcaggagatcaagaccatcctggctaacatgatgaaaccccatctctact---aaaaaaaaaaattaccaaaaacaaaaaaaaattacctgggtgtagtggcgggtgcctgtagtcccagctattcgggaggctgaggcaggagaatggcgtgaacctgggaggcagagctt-----------------------------------------------------------------------gcagtgagccgagatcgcgccgctgcactccagcctgggtgacagagcgagactcattctc-------aaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55684226 644 + 59248254 cacctgAACTTAGAAAACTTTATAAATATTAAAATTGATGTTATGTATATTTTGCCACAATTTTTGAGAAGTACCTTGTGGTCTTTAGagagagtagatgagtggttgcctagggctgggaaagtgaggggatcatggtgatgggcagctgatgggcctggggttctgaagggcagtgatgacaacattctaaaattagactgtgttgacggttgcaccaactctttgaataccaccaaatctaagccattaaattatgcatttttaatgggtaattttatggcatgtaaattatatctcaatcaagttgtatttttaaaTACCAAAAAAAggccaggtgcggtggctcacacctgtaatcccagcactttgggaggccgagacaggcggatcacaaggtcaggagatcaagaccatcctggctaacatgatgaaaccccatctctactaaaaaaaaaaaaaattaccaaaaacaaaaaaaaattacctgggtgtagtggcgggtgcctgtagtcccagctattcgggaggctgaggcaggagaatggcgtgcacctgggaggcagagctt-----------------------------------------------------------------------gcagtgagccgagatcgcgccactgcactccagcctgggtgacagagcgagactcattctc----aaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47798185 638 + 51301725 cacctgaacttagaaaactttataaatattaaaattgatattatgtatattttgccacaatttttgAGAAGTACCTTGTGGTCTTTAGAGAgagtagatgagtggttgcctAGGGCCAGGAAAGTGAGGGGATCATGGTGATGGGCAGCTGATGGGCCTGGGGTTCTGAAGGGCAGTGATGACAACATTCTAAAATTAGACTGTGTTGACGGTTGCACCAACTCTTTGAATACCACCAAATCTAAGCCAttaaattatgcatttttaatgggtaattttatggcatgtaaattatatctcaataaagttgtatttttaaataccaaaaaaagtccaggtgcagtggctcacacctgtaatcccagcactttgggaggccgagacaggcggatcacaaggtcaggagatcaagaccatcctggctaacatgatgaaaccccatccctact---aaaaaaaaaaatta-caaaaaaaaagaaaaattacctgggtgtagtggcgggtgcctgtagtcccagctattcgggaggctgaggcaggagaatggcgtgaacctgggaggcagagctt-----------------------------------------------------------------------gcagtgagccgagatcgcgccactgcactccagcctgggtgacagagcgagactcattctc------aaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47515054 643 + 50890351 cacctgAACTTAGAAAACTTTATAAATATTAAAATTGATGTTATGTATATTTTGCCACAATTTTTGAGAAGTACCTTGTGGTCTTTAGagagagtagatgagtggttgcctagggccgggaaagtgaggggatcatggtgatgggcagctgatgggcctggggttctgaagggcagtgatgacaacattctaaaattagactgtgttgatggttgcaccaactctttgaataccaccaaatctaagtcattcaattatgcatttttaatgggtaattttatggcatgtaaattatatctcaataaagttatATTTTTAAATACCAAAAAAAggccaggtgcggtggctcatgcctgtaatcccagcactttgggaggccaagacgggcggatcacgaggtcaggagatcaagaccatcctggctaacatggtgaaattccatctctact----aaagaaaaaatta-caaaaaaaaaaaaaaattacctgagtgtggtggtggattcctgtggtcccagctactcaggaggctgaggcaggagaatggtgtgaacctgggaggcggagctt-----------------------------------------------------------------------gcagcgagccgagatcacgccactgcactccggcctgggtgacagagcgagactcgttctcaaaaaaaaaaaaaaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19970916 1106 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I a score=328305.000000 s hg38.chr19_GL949747v2_alt 546551 143 + 729520 -aaaaaaaaa-----------aaaaaaGA--------TTAGTAATATCCTCTGTGTCACTTACCACTTAAGTGATTGAATCACGACTTGAAATTCATCATCTCAAACATGGCTTAGAGTCTGTAGAG--GGGGGACAGTCCCAGGAATGCTGGTGTGGGCTTAAG s panTro4.chr19 59822686 132 + 63644993 -aaaaaa--------------------GA--------TTAGTAATATCCTCTGTGTCACTTACCACTTACGTGATTGAATCACGACTTGAAATTCATCATCTCAAACATGGCTTAGAGTCTGTAGAG--GGG--ACAGTCCCAGGAATGCTGGTGTGGGCTTAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56736595 152 + 60714840 -aaaaaaaaaaaaaaaaaaCCAAAAAAGA--------TGAGTAATATCCTCTGTGTCACTTACCACTTAAGTGATTGAATCACGACTCAAAATTCATCATCTGAAACATGGCTTAGAGTCTGTAGAG--GGG--ACAGTCCCAGGAATGCCGGTGTGGGCTTAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103274081 123 - 106955855 ---------------------------GA--------TTAGTAATATCCTCTGTGTCACTTACCA---AAGTGGTTGAATCATGACTTGAAATTCATCATATCAAACATGGCTTAGAGTCTGTAGAG--GGG--ACAGTCCCAGGAATGCCGGTGTGGGCTTAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60558338 134 + 64156825 -aaaaaT--------------------GA--------TTAGTAATATCCTCTGTGTCACTTACCACTTAAGTGGTTGAGTCATGGCTTGAAATTCATCATCTCAAACATGGCTTACAGCCTGTAGATAGGGG--ACAGTCCCAGGAATGCAGGTGTGGGCTTAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55684870 134 + 59248254 -aaaaaT--------------------GA--------TTAGTAATATCCTCTGTGTCACTTACCACTTAAGTGGTTGAGTCATGGCTTGAAATTCATCATCTCAAACGTGGCTTACAGCCTGTAGATAGGGG--ACAGTCCCAGGAATGCAGGTGTGGGCTTAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47798823 133 + 51301725 -aaaaat--------------------ga--------ttagtaATATCCTCTGTGTCACTTACCACTTAAGTGGTTGAGTCATGGCTTGAaattcatcatctcaaacatggCTTACAGCCTGTAGATA-GGG--ACAGTCCCAGGAATGCAGGTGTGGGCTTAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47515697 133 + 50890351 -aaaaaa--------------------GA--------TTAGTAATATCCTCTGTGTCACTTACCGCTTAAGTGGTTGAGTCATGGCTTGAAATTCATCATCTCAAACATGGCTTAGAGTCTGTAGATA-GGG--ACAGTACCAGGAATGTAGGTGTGGGCTTAAG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19972022 142 - 122678785 AAAAAAT--------------------GAATAAATTGTTAGTGACATACTGGGTGTTGCTCACCCTTTAAGTGATTGAGTGATGGTTTGAAATCCATCATCTCCAACATGGCTTACAGTCTCTAAACA-GAG--ATTGTCCCAGGAGTATGAGTGTGAGCCTAAG i canFam3.chr1 I 1106 I 15649 e calJac3.chr22 45865945 4013 + 49145316 I a score=562672.000000 s hg38.chr19_GL949747v2_alt 546694 255 + 729520 GCTGAATTAAATagatccagatggctcacacctgtaatcccaataccttgggaggccgaggcaggtgggaggctgAGGCAGGcggatcactggagctcctggagcgaagaaaggatgctagtggaaaaactggtgaaatcagaataaagtctATAGTTttattttttaaaggaggctgggcgtggtggctcatgcctctaatcccagcactttgggaggctgaggcaggtggatcagttgagttcaggagttcaa s panTro4.chr19 59822818 255 + 63644993 GCTGAATTAAATAGATCCAgatggctcacacctgtaatcccaataccttgggaggccgaggcaggtggaAGGTTGAGGCGGGCGGATCAGTGGAGCtcctggagcgaagaaaggatgccagtggaaaaactggtgaaatcagaataaagtctatagtttTATTTTTTAAAAGAggctgggcgtggtggctcatgcctctaatcccagcactttgggaggctgaggagggtggatcagttgagttcaagagttcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56736747 238 + 60714840 GCTGAACTAAGTAGATCCAgatggctcatacctgtaatcccaataccttgggaggccgaggcaggt-----------------gaatcacttgagctcctggagtgaagaaaggatgctagtggaaaaactggtgaaatcagaataaggtctatagtttTATTTTTTAAAAGAggctgggcgtggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggtggatcagttgaggtcaggagttcaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103274204 238 - 106955855 GCTGAATTAAATAGATCCAgatagctcacacctgtaatcccaataccttgggaggccgaggcaggt-----------------ggatcacttgagctcctggagtGAagaaaggatgctagtggaagaactggtgaaatcagaataaagtctacagtttTATTTTTTAAAAGAggctgggtgtggtggcttatgcctgtaatctcagcaatttgggaggctgaggcgggcggatcagttgaggtcaggagttcaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60558472 238 + 64156825 GCTGAATTAAATAGATCCAgatggctcacacctgtaatcccaatacctagggaggccgaggcaggt-----------------ggatcacttgagctcctggagCGAagaaaggatgttagtggaaaaactggtgaaatcagaataaagtctatagtttTATTTTTTAAAAGAggccaggcacagtgactcatgcctgcaatcccagcactttgggaggccgaggtgggtggataaactgaggtcaggagttcaa i rheMac3.chr19 C 0 I 226 s macFas5.chr19 55685004 238 + 59248254 GCTGAATTAAATAGATCCAgatggctcacacctgtaatcccaatacctagggaggccgaggcaggt-----------------ggatcacttgagctcCTGGAGCGAagaaaggatgttagtggaaaaactggtgaaatcagaataaagtctatagtttTATTTTTTAAAAGAggccaggcacagtgactcatgcctgcaatcccagcactttgggaggccgaggtgggtggataaactgaggtcaggagttcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47798956 238 + 51301725 GCTGAATTAAATAGATccagatggctcacacctgtaatcccaatacctagggaggccgaggcaggt-----------------ggatcacttgagctcctgGAGCGAAGAAAGGAAGttagtggaaaaactggtgaaatcagAATAAagtctatagttttattttttaaaagaggccaggcacagtgactcatgcctgtaatcccagcactttgggaggccgaggtgggcggataaactgaggtcaggagttcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47515830 238 + 50890351 GCTGAATTAAATAGATCCAgatggctcacacctgtaatcccaatacctagggaggccgaggcaggt-----------------ggatcacttgagctcCTGGAGCGAagaaaggatgttagtggaaaaaccggtgaaatcagaataaagtctatagtttTATTTTTTAAAAGAggccaggtacagtgactcatgcctgtaatctcagcactttgggaggccgaggtgggtggataaactgaggtcaggagttcaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19972164 15649 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I a score=361754.000000 s hg38.chr19_GL949747v2_alt 546949 210 + 729520 aaccagcctggccaacttgacgaaaccccatctctactagaaatacaaaaattagctgggcgtggttgtgggtgcctctaatcccagctactcaggaagctgaggcaggagaattgcttgaacccaggaggcggaggttgcagtgagctgagatcacaccattgcactccagcctgggct-acagagcaagattccatctccaaataagag- s panTro4.chr19 59823073 210 + 63644993 aaccagcctggccaacttgacgaaaccccatctctactagaaatacaaaaactagctgggcgtggttgtgggtgcctctaatcccagctactcaggaagctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatcacaccattgcactccagcctgggcg-acagagcaagactccatctccaaataaGag- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56736985 210 + 60714840 aaccagcctggccaacttgatgaaaccccatctctactagaaatacaaaaattagctgggcgtggttgtgggtgcctctaatcccagctactcaggaagctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatcacaccattgcactccagcctgggcg-acagagcaagactccatctccaaaaaaGag- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103274442 210 - 106955855 aaccagcctggccaacttgacaaaatcccatctctactagaaatacaaaaattagctgggcgttgttgtgggtgcctctaatcccagctactcaggaagctgaggcaggagaatcgcttaaacccaggaggcggaggctgtagtgagctgagatcacaccattgcactccaacccgggcg-gcagagcaagactccatctccaaaaaaGag- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55685242 211 + 59248254 aaccagcctggccaacgtgacgaaatcccatctctgctagaaatacaaaaattagctgggcgcggttgtgggtgcctataatcccagctactcaggaagctgaggcaggagaatcgcttgaacgcaggaggcagaggttgcagtgagctgagattgcaccactgcactccagcctgggca-acagagcaagactccatctcacaaaaaaaaa i macFas5.chr19 C 0 I 8 s papAnu2.chr19 47799194 211 + 51301725 aaccagcctggccaacgtgacgaAATCCCATTtctgctagaaatacaaaaattagctgggcgcggttgtgggtgcctataatcccagctactcaggaagctgaggcaggagaatcgcttgaacgcaggaggcagaggttgcagtgagctgagattgcaccactgcactccagcctgggca-acagagcaagactccatctcacacacacaca i papAnu2.chr19 C 0 I 5 s chlSab2.chr6 47516068 210 + 50890351 aaccagcctggccaacatgatgaaaccccatctctattagaaatacaaaaatcagctgggcgcggttgtgggcgcctataatcccagctactcaggaagctgaggcaggagaatcgcttgaacgcaggaggc--aggttgcagtgagctgagattgcaccactgcactccagcctgggtgtgcagagcaagactccatctcacaaaaaaaaa i chlSab2.chr6 C 0 I 9 e canFam3.chr1 19972164 15649 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I e rheMac3.chr19 60558710 226 + 64156825 I a score=557549.000000 s hg38.chr19_GL949747v2_alt 547159 239 + 729520 agacatgacaattaaataaattgtgtaatcttggattaaatcctaaaccaaatatatgtcactggtaaaacaagtggtgaaatttgaataaagtggatagatcagacaatagtgtcatatcagtgctatttcttgaccttgaacatta-----ataacagaatgtccttggttttgggaaatataacctgaagtgattagaggttta-gggcatcatatgcaaattagacacactttcttcgggg s panTro4.chr19 59823283 239 + 63644993 agacatgacaattaaataaattgtgtaatcttggattaaatcctaaaccaaatatatgtcactggtaaaacaagtggtaaaatttgaatacagtggatagatcagacaatagtgtcatatcagtgctatttcttgaccttgaacatta-----ataacagaatgtccttggttttgggaaatataacctgaagtgattagaggttga-gggcatcatatgcaaattagacacactttcttggggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56737195 241 + 60714840 agacatgacaat----taaattgtgtaatcttggattaaatcctaagccaaatatatgtcactggtaaaacaagtggtgaaatttgaattaagtggataggtcagacaatagtgtcacatcagtgctatttcttgatcttgaacatcaataacataacagaatgtccttggttttgggaaatataacctgaagtgattagaggtTTATTTTCATCATATGCAAATTAGACATACTTTTTTGGGGG i ponAbe2.chr19 C 0 I 74 s nomLeu3.chr10 103274652 239 - 106955855 agacatgacaattaaataaattgtgtaatcttggattaaatcctaaaccaaatatatgtcactggtaaaacaagtggtgaaatttgaataaagtggatagatcagacaatagtgtcatatcagtgctatttcttgaccttgaacatcaataacataacagaatgtccttggttttgggaagtataacctgaagtgattaaaggttta-gggcatcatatgcaaattagacatactttttt----- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60558936 244 + 64156825 agacatgacagttaaataaattgtgtaatcttgaattaaatcctaaaccaaatacatgtcactggtaaaacaagtggtgacgtttgaataaagtggatagatcagacaatagtgccatatcagtgatatttcttgaccttgaacatcagtaacatagaagaatgtccttggttttaggaactataacctgaagtgattagaggttta-gggcatcatatgcaaattagacacacttttttcgggg i rheMac3.chr19 I 226 C 0 s macFas5.chr19 55685461 244 + 59248254 aaacatgacaattaaataaattgtgtaatcttgaattaaatcctaaaccaaatacatgtcactggtaaaacaagtggtgacgtttgaataaagtggatagatcagacaatagtgccatatcagtgatatttcttgaccttgaacatcagtaacatagcagaatgtccttggttttaggaactataacctgaagtgattagaggttta-gggcatcatatgcaaattagacacacttttttcgggg i macFas5.chr19 I 8 C 0 s papAnu2.chr19 47799410 244 + 51301725 agacatgacaattaaataaattgtgtAATCTTGAATTAAATCCTAAACCAAATACATGTCACTGGTAAAACAAGGGGTGACATTTGAATAAAGTGGATAGATCAGACAATAGTGCCATATCAGTGACATTTCTTGACCTTGAACATCAGTAACATAGCAGAATGTCCTTGGTTTTAGGAACTATAACGTGAAGTGATTAGAGGTTTA-GGGCATCATATGCAAATTAGACACACTTTtttggggg i papAnu2.chr19 I 5 C 0 s chlSab2.chr6 47516287 244 + 50890351 aaacatgacaattaaataaattgtgtaatcttgaattaaatcctaaaccaaatacatgtcactggtaaaacaagtggtgacatttgaataaagtggatagatcagacaatagtgccatatcagtgatatttcttgaccttgaacatcagtaacagagcagaatgtccttggttttaggaactataacctgaagtgattagaggttta-gggcatcacatgcaaatcagacacacttttttggggg i chlSab2.chr6 I 9 C 0 e canFam3.chr1 19972164 15649 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I a score=292397.000000 s hg38.chr19_GL949747v2_alt 547398 177 + 729520 agagagggagagggagagaggctgaatgatgaagcaaatgtggtaaaatgctaactttggggaaatctggatgaagaaattacagat---ttttttttttttt------------atagacagggtaacactctgtcacccaggctagagtgcagtggcacgatcatggctcactgcagcttctacctccct s panTro4.chr19 59823522 189 + 63644993 agagagggagagggagagaggctgaatgatgaagcaaatgtggtaaaatgctaactttgggggaatctggatgaagaaattacagat---ttttttttttttttttttttttttaatagacagggtaacactctgtcacccaggctagagcgcagtggcacgatcatggctcactgcagcttctacctccct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103274891 173 - 106955855 -----gggggagggagagaggctgaatgatgaagcaaatctggcaacatgctaactttggggaaatctggatgaagaaattacagaa---tttttttttttttt-----------agagacagggtaatactctgtcacccaggctagagtgcagtggcacgatcatggctcactgcagcttctacctcact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60559180 176 + 64156825 ----agagagagggagaaaggctgaatgatgcagcaaatggagtaaaatgctaactttggggaaatctggatgaagaaattacagaa-tttttttttttttttt-----------aaagagagggtctcactctgtcacccaggctagagtgcagtggcacgatcatggctgactgcagcttctacctccgt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55685705 173 + 59248254 ----agagagagggagaaaggctgaatgatgcagcaaatggagtaaaatgctaactttggggaaatctggatgaagaaattacagaa----ttttttttttttt-----------aaagagagggtctcactctgtcacccaggctagagtgcagtggcacgatcatggctgactgcagcttctacctccct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47799654 174 + 51301725 ----agagagaggaagaaaggctgAATGATGCAGCAAATGGAGTAAAATGCTAACTTTGGGGAAATCTGGATGAAgaaattacagaa---tttttttttttttt-----------aaagacagggtctcactctgtcacctaggctagagtgcagtggcacgatcatggctgactgcagcttctacctccct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47516531 177 + 50890351 ----agagagagggagaaaggctgaatgatgcagcaaatggagtaaaatgctaactttggggaaatctggatgaagaaatcacagaattttttttttttttttt-----------acagacagggtctcactctgtcacccaggctagagtgcagtggcacgatcatggctgactgcagcttctacttccct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19972164 15649 - 122678785 I e ponAbe2.chr19 56737436 74 + 60714840 I e calJac3.chr22 45865945 4013 + 49145316 I a score=728062.000000 s hg38.chr19_GL949747v2_alt 547575 310 + 729520 gggctcagatgaccctctcacctcagcctcccaagtagctgggactataggcgcacagcaccacacctggctaa-tttttgcatttttttttc-ccccaggctcgtctcaagcaatccacccacctcggcctcccaaagtgctgggattacaggtgtgagccactgcacctggccagaaattctttaaactatttttgc------------aagtctggaattatgtcaaaATTAAAAGCTCAAAATAATAA--AAGACAATATTCTTATATTTCTTTGGTGAAGGTAACTATGTTATGGCTGAGAGGGTGGCTGAGGTCTGAGGA s panTro4.chr19 59823711 321 + 63644993 gggctcagatgaccctctcacctcagtctcccaagtagctgggactataggcacacagcaccacacctggctaa-tttttgcatttctttttc-ccc-aggctcatctcaagcaatccacccacctcggcctcccaaagtgctaggattacaggtgtgagccactgcacctggccagaaattatttatactatttttgccagtttttttgtaagtctggaattatgtcaaaattaaaaGCTCAAAATAATAA--AAGACAATATTCTTATATCTATTTGGTGAAGGTAACTATGTTATGGCTGAGAGGGTGGCTGAGGTCTGAGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56737510 321 + 60714840 gggctcagatgaccctctcacctcagcctcccaagtaggtgggactacaggcacatagcaccacacctggctaa-tttttgcatgtttttttc-ccc-aggctggtctcaagcaatctacccacctcggcctcccaaagtgctaggattacaggtgtgagccactgcgtctggccAgaaattctttaaactatttttgccagtttttttgtaagtctggaattatgtcaaaattaaaagctcaaaaTAATAA--AAGACAATATTCTTATATTTATTTGGTGAAGGTAACTATGTTATGGCTGAGAGGGGGGCTGAGGTGTGAGGA i ponAbe2.chr19 I 74 C 0 s nomLeu3.chr10 103275064 316 - 106955855 gggctcagatgaccctctcacctcagcctcccaagtagctgggactacaggcacacagcaccacacctagctaa-tttttgtatatttttctt-ccccaggctggtctcaagcaatccacccaccttggcctcccaaagtgctaggattacaagtgtgagccactgcgcctggccagaaattctttaaactatttttgccagtttttttgtaagtctggaattatgtcaaaattaaaaGCTCAAAATAATAA--AAGATAA------TATATTTATTTGGTGAAGGTAATTATGTTACGGCTGAGAGGGGGGCTGAGGTGTGAGGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60559356 324 + 64156825 gggctccgatgaccctctcacctcagcctcccaagtagctgggactacaggcacacagcaccacacctgactaattttttgcatttttttttt-ccc-agactggtcccaagcaattcatccacctcagcctcccaaagtgctaggactacaggtgtgagccactgtgcctcgccagaaattctttaaactatttttgccagtttttttgtaagtctggaattatgtcacaattaaaaGCTCaaaataataataaaaaaaatattCTTCTATTTATTTGGTGAAGGTAACTATGTTATGGCTGAGAGGGGGGCTCAGGTGTGAGGA i rheMac3.chr19 C 0 I 2 s macFas5.chr19 55685878 325 + 59248254 gggctccgatgaccctctcacctcagcctcccaagtagctgggactacaggcacacagcaccacacctgactaattttttgcattttttttttcccc-agactggtcccaagcaattcatccacctcagcctcccaaagtgctaggactacaggtgtgagccactgtgcctcgccagaaattctttaaactatttttgccagtttttttgtaagtctggaattatgtcacaattaaaaGCTCAAAATAATAATTAAAAAAGTATTCTTATATTTATTTGGTGAAGGTAACTATGTTATGGCTGAGAGGGGGGCTCAGGTGTGAGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47799828 324 + 51301725 AGGCTCTGatgaccctctcacctcagcctcccaagtagctgggactacaggcacgcagcaccacacctgactaattttttgcatttttttttt-ccc-agactggTCCCAAGCaattcatccacctcagcctcccaaagtgctaggactacaggtgtgagccactgtgcctcgccaGAAATTCTTTAAACtatttttgccagtttttttGTAAGTCTGGAATTATGTCACAATTAAaagctcaaaataataataaaaaaagtattcttatatttatttggtGAAGGTAACTATGTTATGGCTGAGAGGGGGGCTCAGCTGTGAGga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47516708 324 + 50890351 gggctccgatgaccctctcacctcagcctcccaagtagctgggactacaggcacgcagcaccacacctgactaattttttgcatttttttttt-ccc-agactggtcccaagcaattcacccacctcagcctcccaaagtgctaggactacaggtgtgagccactgtgcctcgccagaaattctttgaactatttttgccagtttttttgtaagtctggaattatgtcacaattaaaaGCTCAAAATAATAATAAAAAAAGTATTCTTATATTTATTTGGTGAAGGTAACTATGTTATGGCCAAGAGGGGGGCCCAGGTGTGAGGA i chlSab2.chr6 C 0 I 2 e canFam3.chr1 19972164 15649 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I a score=1288.000000 s hg38.chr19_GL949747v2_alt 547885 2 + 729520 TC s panTro4.chr19 59824032 2 + 63644993 TC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56737831 2 + 60714840 CT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103275380 2 - 106955855 CC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55686203 2 + 59248254 CC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47800152 2 + 51301725 cc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19972164 15649 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I e chlSab2.chr6 47517032 2 + 50890351 I e rheMac3.chr19 60559680 2 + 64156825 I a score=76787.000000 s hg38.chr19_GL949747v2_alt 547887 154 + 729520 CAGCCTACATAAGTCTCCTCCATAG-AGGGCATCCAAGCGCTCCGTAGGGGGAAGGATAAAGAAAACACCCAGAGTTATGACAGCTGTGTAAGGGGAAACGCCAGCACCGAGTACTGAATCTTCAGTAAATAAGAAGGAGGCGggctgggtgtgg s panTro4.chr19 59824034 154 + 63644993 CAGCCTACATAAGTCTCCTCCATAG-AGGGCATCCAAGCGTTCCATAGGGGGAAGGATAAAGAAAACACCCAGAGTTATGACAGTTGTGTAAGGGGAAACACCAGCACCGAGTGCTGAATCTTCAGTAAATAAGAAGCAGGTGggctgggtgtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56737833 155 + 60714840 GAGTCTACATAAGTCCCCTCCATAGAAGGGCATCCAAACGCTCCATAGGGAGAAggataaagaaaacacccagagttatgacagttgtgtaaggggaaacgccagcaccgagtgctgaatcttcagtaaataagaaggagGTGggctgggtgcgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103275382 153 - 106955855 CAGCCTACATAAGTCTCTTCCATAGAAGGGCATCCAAGCGTTCCATAGGGGGAAGGATAAAGAAAACACCC--AGTTATGACAGTTGTGTAAGGGGAAACGCCAGCACCCAGTGTTGAATCTTCAGTAAATAAGAAGGAGGTCggctgggtgcgg i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19972164 15649 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I e chlSab2.chr6 47517032 2 + 50890351 I e papAnu2.chr19 47800154 0 + 51301725 C e macFas5.chr19 55686205 0 + 59248254 C e rheMac3.chr19 60559680 2 + 64156825 I a score=884478.000000 s hg38.chr19_GL949747v2_alt 548041 391 + 729520 tggctcacgcctgtaatcccagcactttgggaggctaaagtgggctgatcacttgaggtcaagagttcgagactagcctggccaacatggggaaaccctgtctctactaaaaatacaaaaattagtcgagtgtggtggcacac----------------------------------gcctgtaatcccagctacttgggaggctagaacaggagaattgcttgaacccaggaggtgaaggttgcagtgagctgagattgcaccactgcaccccagcttgagggacagagtgagattccgtcttaaagagaaaaaaaaaagaaTTAGCACATTTGTTTGCCTCAAGAAGATACAACTAGtcttgtacagtagtcacatgtatccaccaggatatattccaaggccccagtggatgctgaaaacta s panTro4.chr19 59824188 391 + 63644993 tggctcaagcctgtaatcccagcactttgggaggctaaggtgggctgatcacttgaggtcaagagttcgagactagcctggccaacgtggggaaaccctgtctctactaaaaatacaaaaattagtcgagtgtggtggcacac----------------------------------gcctgtaatcccagctactcggaaggctagaacaggagaactgcttgaacccaggaggtggaggttgcagtgagctgagattacaccactgcaccccagcttgagggacagagtgagattccgtcttaaagagagaaaaaaaagaaTTAGCACATTTGTTTGCCTCAAGAAGATACAACTAGTCTTGTAcagtagtcacatgtatccaccaggatatatttcaaggccccagtggatgctgaaaactg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56737988 423 + 60714840 tggctcaagcctgtaatcccagcactttgggaggctaaggtgggctgatcacttgaggtcaggagtttgagactagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattggtcgagtgtggtggcacacgcctgtaatcccagctactcaggaggttgcacatgcctgtaatcccagctactcgggaggctagaacaggagaattgcttgaacccaggaggtggaggttgcagtgagctgagattgcaccactgcaccccagcttgagggacagagcgagattccatcttaaagag--aaaaaaaagaaTTAGCACATTTGTTTGCCTCAAGAAGATACAACTAGTCTTGTACAGTAGTCACATGTATCCATCAggatatattccaaggccccagtggatgctgaaaacta i ponAbe2.chr19 C 0 I 76 s nomLeu3.chr10 103275535 369 - 106955855 tggctcaagcctgtaatcccagcactttgggaggctaagatgggccaatcacttgaggtgaggagttcgagactagcctggccaacatggtgaaaccctgtctctactaaaaa-acaaaaattagtcaagtgtggtggcactc------------------------------------------------------gggaggctagaacaggagaattgcttgaacccaagaggtggaggttgcagtgagctgagattgcaccactgtaccccagcttgagggacagagcgagattccatcttaaagaggaaaaaaaaGGAATTAGCACATTTGTTTGCCTCAAGAAGATACAACTAGTCTTG-ACAGTAGTCATATGtatccaccaggatacattccaaggccccagtagatgctgaaaacta i nomLeu3.chr10 C 0 I 2 s rheMac3.chr19 60559682 390 + 64156825 tggctcacgcctgtaatcccagcactttgggaggccaaggtgggccgatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctattaaaaatacaaaaattagtcgggtgtggtggcatgc----------------------------------acctgtaatcccatctactcaggaggctacgacaggagaattccttaaacccaggaggtggaggttgcagtgagctgagatcacaccattgcaccccagtttgagggacagagtgagacgccatcttaaag-aaaaaaaaaaagaaTTAGCACATTTGTTTGCCCCAAGAAGATACAACTAGTCATGTAcagtagttacctgtatccaccaggatacattccaaggccccagtgaatgctgaaaacta i rheMac3.chr19 I 2 I 1699 s macFas5.chr19 55686205 390 + 59248254 tggctcatgcctgtaatcccagcactttgggaggccaaggtgggccgatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctattaaaaatacaaaaattagtcgggtgtggtggcatgc----------------------------------acctgtaatcccagctactcaggaggctacgacaggagaattccttaaacccaggaggtggaggttgcagtgagccgagatcacaccattgcaccccagtttgagggacagagcaagacgccatcttaaag-aaaaaaaaaaagaaTTAGCACATTTGTTTGCCCCAAGAAGATACAACTAGTCTTGTACAGTAGTTACCTGTATCCACCAGGATACATTCCAAGGCCCCAGTGAATGCTGAAAACTA i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47800154 389 + 51301725 tggctcacgcctgtaatcccagcactttgggaggccaaggtgggccgatcacttgaggtcaggagttcaagaccagcctggccaatatggtgaaaccctgtctctattaaaaatacaaaaattagtcgggtgtggtggcatgc----------------------------------acctgtaatcccagctactcaggaggctacgaCAGGAGAAttccttaaacccaggaggtggaggttgcagtgagctgagatcacaccattgcaccccagtttgagggacagagcaagacgccatcttaaag--aaaaaaaaaagaattagcacaTTTGTTTGCCCCAAGAAGATACAACTAGTCTTGTACAGTAGTTACCTGTACCCACCAGGATACATTCTAAGGCCCCAGTGAATGCTGAAAACTT i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 47517034 391 + 50890351 tggctcacgcctgtaatcccaacactttgggaggccaaggtgagccgatcacttgaggtcaggagttcaagacaagcctggccaacatggtgaaaccctgtctctattaaaaatacaaaaattagtcgggtgtggtggcgggt----------------------------------gcctgtaatcccagctactcaggaggctacgacaggagaattccttaaacccaggaggtagaggttgcagtgagccgagatcacaccattgcaccccagtttgagggacagagcgagacgccatcttaaagaaaaaaaaaaaagaaTTAGCACATTTGTTTGCCCCAAGAAGATAAAACTAGTCTTGTACAGTAGCTACCTGTATCCACCAGGATACATTCCAAGGCCCCAGTGAATGCTGAAAACTA i chlSab2.chr6 I 2 I 853 e canFam3.chr1 19972164 15649 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I a score=2644.000000 s hg38.chr19_GL949747v2_alt 548432 13 + 729520 catagtaccttac s panTro4.chr19 59824579 13 + 63644993 catagtaccttac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103275906 13 - 106955855 catactaccatac i nomLeu3.chr10 I 2 I 4 s macFas5.chr19 55686597 6 + 59248254 CATAGT------- i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47800545 6 + 51301725 catagt------- i papAnu2.chr19 I 2 C 0 e canFam3.chr1 19972164 15649 - 122678785 I e ponAbe2.chr19 56738411 76 + 60714840 I e calJac3.chr22 45865945 4013 + 49145316 I e chlSab2.chr6 47517425 853 + 50890351 I e rheMac3.chr19 60560072 1699 + 64156825 I a score=4814.000000 s hg38.chr19_GL949747v2_alt 548445 16 + 729520 atgt--------atatatatatgt s panTro4.chr19 59824592 24 + 63644993 atgtgtatatatatatatatatgt i panTro4.chr19 C 0 C 0 s macFas5.chr19 55686603 16 + 59248254 GTGt--------acatatatatat i macFas5.chr19 C 0 I 232 s papAnu2.chr19 47800551 16 + 51301725 gtgt--------gtgtatatatat i papAnu2.chr19 C 0 I 2 e canFam3.chr1 19972164 15649 - 122678785 I e ponAbe2.chr19 56738411 76 + 60714840 I e calJac3.chr22 45865945 4013 + 49145316 I e nomLeu3.chr10 103275919 4 - 106955855 I e chlSab2.chr6 47517425 853 + 50890351 I e rheMac3.chr19 60560072 1699 + 64156825 I a score=44462.000000 s hg38.chr19_GL949747v2_alt 548461 447 + 729520 atatacatat---atacacatat--------------acgtatatgt-----------------------atacatac---atgtatatatacatgtatgtat----atacatatatgcatatatacatacatgtatatatacatg-tatgtatatacatata----tgtatatgtatgtatacacgcatacatgtat------------gtatacacgca------------tacatgtatgt----at----------------a-tacatatatgtatgtatacacgcatacatgtatg--tatatacatatatgtatgtatacacgcatacatgtgtgtgta--tacatatatatgcatgtatgcatgtgtgta-------------tatatacatatatgtgtatatatacgcatatacat---gtatgtgtatatatgcat----gtgtatatatacatgtacggtactatgcagtatatata-------------cacat-atatgtatatatgtatacatatatgtataaatgtatatatgt------------------------gtatatatataaaaggtatatatgtatatatg s panTro4.chr19 59824616 572 + 63644993 atatacatat---atacatatatgtatatgtgtatatacgtatatgt-gtatatatgtatacatgcatgcatacatgc---atgtatatatacatgtgtgtgtgcgcatacatgtatgtatatatgcatgtatgtatatatgcata-catgtatgtgtatata----catatatgtatgtatgcgcgcatacatgtatatgtacatatatgtatgcatgCACACGTGTGTGTGTACATATATGT----ATTTATACACGCATGCgta-tatatacatgtatgtatacacgcatacatgtgtgcatatatacatgtatgtatatatgcacgcatgcatgtatatatacgtatgtatatatgcacgcatgcatgtatatg-------------tatatatacgtacatgtatatgcgcacatatacat---gtatgtgtatatatacatatatgtgtatatatacatgtacggtactatgcagtatatatatgcggtatatatacgcat-atatgtatatatgtatacatatatgtataaatgtatatatgtataaatgtataaatgtatatatgtgtatatatataaaaggtatatatgtatatatg i panTro4.chr19 C 0 C 0 s macFas5.chr19 55686851 458 + 59248254 atatttatatataatatatattt---------------tttatatgtaatatttttatatatattttta-atatgtaatatatatataaatat---tatatat-----taaaaatatata-atatttataatattatatataaatattacatataaaaatatataatattatatataaatat-------tacatata-----------------------a------------aaaatatataatattat----------------a-tataaatat-tacatataaaaatatataatatta--tatataaatat-tacatataaaaatatataatattatatataaatat-tatatataaatat---tatatataaaaaatatataatattatatataaatat---tatatataaaaatatatattatctataaatatataaatat-------tatctataaatatata---------aatatataaa-------------taa---atatataaatatatataa----atatataaatat---tatatataaatatataaatat-----------tatatataaaa-atatatataaaac--ta i macFas5.chr19 I 232 C 0 s papAnu2.chr19 47800569 360 + 51301725 -------------atataaatat---------------tatatatataatatt-----------------atatataa---atatataaatat---tatatat----ataatattatatataaatatataatattatatataaatattatatataaatatata----aatatatataaacat--------------------------------------a------------taaatatataa----at----------------attataaacat-tatgtataa--------------a--tatataaatat-tata-------------aacattatatata---------ttataaacat---tatatataaa-------------tatatataaacac---tatatataaatatataaat---------atatataaacat-------tatatataaatatata---------aatatatata-------------aacattatatataaatatataaacat-tatatataaatat---tatatataaatatataa----------------atatataaaatatatatataaaactata i papAnu2.chr19 I 2 C 0 e canFam3.chr1 19972164 15649 - 122678785 I e ponAbe2.chr19 56738411 76 + 60714840 I e calJac3.chr22 45865945 4013 + 49145316 I e nomLeu3.chr10 103275919 4 - 106955855 I e chlSab2.chr6 47517425 853 + 50890351 I e rheMac3.chr19 60560072 1699 + 64156825 I a score=22098.000000 s hg38.chr19_GL949747v2_alt 548908 31 + 729520 tgtgtATATATAAAATGCATGAATttctttt s panTro4.chr19 59825188 31 + 63644993 tgtgtatatataAAATGCATGAATTTCTTTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103275923 31 - 106955855 tatatatatatATAATgcatgattttttttc i nomLeu3.chr10 I 4 I 30 s macFas5.chr19 55687309 31 + 59248254 tatatatataAaaaacgcatggatttctttt i macFas5.chr19 C 0 I 33 s papAnu2.chr19 47800929 31 + 51301725 tatatatatataaaacgcatggatttctttt i papAnu2.chr19 C 0 I 33 e canFam3.chr1 19972164 15649 - 122678785 I e ponAbe2.chr19 56738411 76 + 60714840 I e calJac3.chr22 45865945 4013 + 49145316 I e chlSab2.chr6 47517425 853 + 50890351 I e rheMac3.chr19 60560072 1699 + 64156825 I a score=606260.000000 s hg38.chr19_GL949747v2_alt 548939 366 + 729520 ttcttactgtagatcttaacaacttctgcatagaatttttttttattaagtggagagttagttacttacttAAAAGAAATGTTTCTTggctgggtgtggtggctcacacctgtaatcccagcactttgagaggccgaggcaggaagattcacttgaggtgaggagttggagaccatcctggccaacgtggtaaaaaccggtctctactaaaagtacaaaaatgagctgggcgtggtgttgggtgtctgtagtcccagctactcaggtggctgaggcaggagaattgcttgaacccacaaggcagaggttgcagtgagctgagatcacaccactgcaccacagcctgggcaacagagcaagactctg s panTro4.chr19 59825219 363 + 63644993 ttcttactgtagatcttaac---ttctgcatagaatttttttttattaagtggagagttagtaacttacttaaaagaaATGTTTCTTggccgggtgtggtggctcacacctgtaatcccagcactttgggaggccgaggcaggaagattcacttgaggtaaggagttagagaccatcctggccaacatggtaaaagctggtctctactaaaagtacaaaaatgagctgggcgtggtgttaggtgtctgtagtcccagctactcaggtggctgaggcaggagaattgcttgaacccacaaggcagaggttgcagtgagctgagatcacaccactgcaccacagcctgggcaacagagcaagactctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56738487 361 + 60714840 ttcttactgtagatcttaacaacttctgcatagaa-ttttttttattaagtgaagaGTTAG----TTACTTAAAAGAAATGTTTCTTggccgggtgtggtggctcacacctgtaatcccagcactttgggaggccgaggtggaaagattcacttgaggtgaggagttcgagaccagcctgggcaacgtggtaaaacccagtctctactaaaagtacaaaaatgagctgggcgtggcgttgagtgtctgtagtcccagctactcaggtggctgaggcaggagaattgcttgaacctacgaggcagaggttgcagtgagctgagatcacaccactgcaccgcagcctgggcaacagagcaagactctg i ponAbe2.chr19 I 76 C 0 s nomLeu3.chr10 103275984 359 - 106955855 ttcttaccgtagatcttaacaacttctgcatagaa-ttttttttattaagtggagaGTTAG----TTACTT--AAGAAATGTTTCTTggctgggcgtggtggctcacacctgtaatcccagcactttgggagggtcaggcaggaagagtcacttgaggtgaggagttcaagaccagcctggccaacgtggtaaaacccggtctctactaaaagtacgaaaatgagctgggcatggtgttgggtgtctgtagtgccagctactcaggtggctgaggcaggagaattgcttgaacccacgaggcagaggttgcagtgagccgagatcacaccactgcaccacagcctgggcaacagagcaagactctg i nomLeu3.chr10 I 30 C 0 s rheMac3.chr19 60561771 362 + 64156825 ttcttactgtagatcttaacaacttctgcatagaa-ttttttttattaagtg--gagttagttacttacttaaaagaTATGTTTCTTggccgggcgtggtggttcacacctgtaatcccagcactttgggaggccgagacgggaagattgacttgaggtcaggaaatccagaccagcctggccaacgtggtgaaagcccgtctctact-aaagtacaaaaatgagccaggcgtggtgttgggcatctgtagtcccagctactcgggaggctgaggcaagagaatcgcttgaacctgggagacggcggttgtggggaacaaagatcgcaccactgcaccacagcctgggggacagagcaagactctg i rheMac3.chr19 I 1699 C 0 s macFas5.chr19 55687373 363 + 59248254 ttcttactgtagatcttaacaacttctgcatagaa-ttttttttattaagtg--gagttagttacttacttaaaagaTATGTTTCTTggccgggcgtggtggttcacacctgtaatcccagcactttgggaggccgagacgggaagattcacttgaggtcaggaaatcaagaccagcctggccaacgtggtgaaagcccgtctctactaaaagtacaaaaatgagccaggcgtggtgttgggtgtctgtagtcccagctactcgggaggctgaggcaagagaatcgcttgaacctgggagacggcggttgcagtgaacaaagatcgcaccactgcaccacagcctgggggacagagcaagactctg i macFas5.chr19 I 33 C 0 s papAnu2.chr19 47800993 363 + 51301725 TTCTTACTGTAGATCTTAACAACTTCtgcatagaa-ttttttttattaagtg--GAGTTAGTTACTTACTTAAACGATATgtttcttggccgggcatggtggttcacacctgtaatcccagcactttgggaggccgaggcgggaagattcacttgaggtcaggaaatcaagaccagcctggccaacgtggtgaaaccctgtctctactaaaagtataaaaatgagccgggcgtggtgttgggtgtctgtagtcccagctactcgggaggctgaggcaagagaatcgcttgaacctgggagacggaggttgcagtgaacaaagatcgcaccactgcaccacagcctgggggacagagcaagactctg i papAnu2.chr19 I 33 C 0 e canFam3.chr1 19972164 15649 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I e chlSab2.chr6 47517425 853 + 50890351 I a score=83593.000000 s hg38.chr19_GL949747v2_alt 549305 76 + 729520 tctcaaaaaaaaaaaaaaaaagaaagaaaaagaaAAAGAAAAGAAATGTTTCTTTTCTTATTAAGTTCTTTAAATG s panTro4.chr19 59825582 75 + 63644993 tctcaaaaaaaaaagaaaaaagaaa-aaaaagaaaAAGAAAAGAAATGTTTCTTTTCTTATTAAGTTCTTTAAATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56738848 53 + 60714840 tctcaaaaaaaaaa------------aaaaagaaaa-----------GTTTCATTTCTTATTAAGTTCTTTAAATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103276343 47 - 106955855 tctcaaaa------------------aaaaagaaaT-----------GTTTCTTTTCGTATTAAGTTCTTTAAATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60562133 64 + 64156825 tctcaaaacaaaaa------------aaaaagaaaaagaaaggaaaTGTTTCTTTTCTTATGAAGTTCTTTGAATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55687736 64 + 59248254 tctcaaaaaaaaaa------------aaaaagaaaaagaaaggaaaTGTTTCTTTTCTTATGAAGTTCTTTGAATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47801356 63 + 51301725 tctcaaaaaaaaaa------------aaaaa-aaaaagaaaggaaatgtttcttttcttatgaagttttttgaatg i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19987813 51 - 122678785 tttcaaaaaaagaa------------aaaAAAGAAGGCAAAAAGAATA-------------AAGATTACTTAAAAA i canFam3.chr1 I 15649 C 0 e calJac3.chr22 45865945 4013 + 49145316 I e chlSab2.chr6 47517425 853 + 50890351 I a score=406043.000000 s hg38.chr19_GL949747v2_alt 549381 154 + 729520 AAAAGCTTTTCTTTTCACTTTTATTTTATTGAAACATTATAACACT-------ATCTTTGAAGAAGATAGTGTTATCATTCCATTCTGATGAAACCAATTAACTTATCCAAGCATATGTATACTGTACACAGAGAAGCCAACGTCAAaacccctattttta s panTro4.chr19 59825657 154 + 63644993 AAAAGCTTTTCTTTTCACTTTTATTTTATTGAAACATTATAACACT-------ATCTTTGAAGAAGATAGTGTTATCATTCCATTCTGATGAAACCAATTAACTTATCCAAGCATATGCATGCTGTACACAGAGAAGCCAACGTCAAAACCCCTattttta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56738901 154 + 60714840 AAAAGCTTTTCTTTTCACTTTTATTTTAGTGAAACATTATAACACT-------ATCTTTGAAGAAGATAGTGTTATCATTCCATTCTGATGAAACCAATTAACTTATCCAAGCATATGCATGCTGTACACAGAGAAGCCAACATTAAAACCCCTattttta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103276390 153 - 106955855 -AAAGCTTTTCTTTTCACTTTTATTTTATTGAAACATTATAACACC-------GTATTTGAAGAAGATAGTGTTATCATTCCATTCTGATGAAACCAGTTGACTTATCCAAGCATATGCATGCTGTACACAGAGGAGCCAACGTTAAAACCCCTattttta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60562197 152 + 64156825 AAAAGCTTTTCTTTTCACGTTTATTTTATTGAAACATTATAGCACT-------ATCTTTGAAGAAGAC--TGTTATCATTCCATTCTGATTAAACCAATTAACTTATCCAAGCATATGTATGCTGTACGCAGAGGAGCCAGCGTTAAAACCCCTattttta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55687800 152 + 59248254 AAAAGCTTTTCTTTTCACGTTTATTTTATTGAAACATTATAGCACT-------ATCTTTGAAGAAGAC--TGTTATCATTCCATTCTGATTAAACCAATTAACTTATCCAAGCATATGTATGCTGTACGCAGAGGAGCCAGCGTTAAAACCCCTattttta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47801419 152 + 51301725 aaaagcttttcttttcacgtttattttattgaaacattATAGCACT-------ATCTTTGAAGAAGAC--TGTTATCATTCCATTCTGATTAAACCAATTAACTTATCCAAGCATATGTATGCTGTACACAGAGGAGCCAGCGTTAAAACccctattttta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47518278 152 + 50890351 aaaaGCTTTTCTTTTCACATTTATTTTATTGAAACATTATAGCACT-------ATCTTTGAAGAAGAC--TGTTATCATTCCATTCTGATTAAACCAATTAACTTATCCAAGCATATGTATGCTGTACACGGAGGAGCCAGCGTTAAAACCCCTattttta i chlSab2.chr6 I 853 C 0 s canFam3.chr1 19987864 142 - 122678785 ----------------AATTGCATTTTGTTGAAACATTGTAAAGATTCTCCAAATCTTTGGAGAACATAGTGTT---ATTTCATTCTGATGAAACCAATTAACTGATCCAATCATATGTATACAAAACAAAGAGGAGCCAAGATTAAACACAAAGTTTTTA i canFam3.chr1 C 0 I 156 e calJac3.chr22 45865945 4013 + 49145316 I a score=1979586.000000 s hg38.chr19_GL949747v2_alt 549535 874 + 729520 tctttttagattcagcagatacatgtgcaggttttt---tatgagtatattgcatgatgctgaggcttgcattaatgatctagtc--------------------accaaataggtagattttcaagccttgctcccctccttacccaatgtttagcgctctcacttataagtgagaacatgtggtatttggttttcttttctttt--ttttttttttttttgagatggagtttcactcttgttgcccaggctggagtacaatggcaccatctcggctcactgcaaccttcaccttccaggttcaagcaattctcctgcctcagcctcccgagtagttgggactacaggcatgtgccaccacacccggctaattttgaatttttagtagagacagggtttctgcatgttggtcaggctggtctcgaactcccgacctaaggtgatccacctgcctcagcctcccaaagtgctgggatgacaggcgtgagccaccgtgtctggccagtatttggttttctgtttctgtgttaactcgcttaggataatggcctctagctgcatccatgttgctgcaaaggacataatcttgtgatttttcaaggctgtatagcgttctgtggtgtatacatatcacattgtctttatccagtccacctctgatgggacctgggtggattccatgtcttcactattgtgaatcctgctgcaatgaacatacaagtgcatgtgtctttttggtagaatgatttattttcctttggctatatacccagcgatgggattgctgggctgaatggtaactctgtttgtagttctctgaaatatctccaaaccaaactgctttccacagtggctgaactaatttacac--ccaccaacagtgtataagtgtcccctttg s panTro4.chr19 59825811 878 + 63644993 tcttcttagattcagcagatacatgtgcaggttttt---tatgagtatattgcatgatgctgaggcttacattaatgatctagtc--------------------accaaataggtagattttcaagccttgctcccctccttacccaatgtttagcgctctcacttataagtgagaacatgtggtatttggttttcttttcttttctttttttttttttttgagatggagtttcactcttgttgcccaggctggagtacaatggcaccatctcggctcactgcaaccttcacctcccaggttgaagcaattctcctgcctcagcctcccgagtagttgggactacaggcatgtgccaccacgcccggctaattttgtatttttagtaaagacagggtttctgcatgttggtcaggttggtctcgaactcctgacctaaggtgatccacctgcctcagcctcccaaagtgctgggatgacaggcgtgagccaccgcgtctggccagtatttggttttctgtttctgtgttaactcgcttaggataatggcctctagctgcatccatgttgctgcaaaggacataatcttgtgatttttcaaggctgtatagcgttctgtggtgtatacatatcacattgtctttatccagtccacctctgatgggacctgggtggattccatgtcttcactattgtgaatcctgctgcaatgaacatacaagtgcatgtgtctttttggtagaatgatttattttcctttggatatatacccagtgatgggattgctgggctgaatggtaactctgtttgtagttctctgaaatatctccaaaccaaactgctttccacagtggctgaactaatttacactcccaccaacagtgtataagtgtcccctttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56739055 869 + 60714840 tctttttagactcagcagatacatgtgcaggtttttttatatgagtatattgcatgatgctgaggcttgcattaatgatccagtc--------------------accaaataggtagattttcaagccttgctcccctccttacccaatgtttaacgctctcacttataagtgagaacatgtggtatttggttttct----------ttttttttttttttgagacggagtttcactcttgttgcccaggctggagtacaatggcgccatctcggctcactgcaacctccacctcccaggttcaaacaattctcctgcctcagcctcccgagtagttgggactacaggcatgcgccaccacgcctggctaattttgtatttttagtagagacagggtttctgcatgttggtcaggctggtctcgaacacccgacctcaggtgatccacctgcctcagcctaccaaagtgttgggatgacaggcatgagccaccacatctggccagtatttggttttctgtttctgtgttaacttgcttaggataatggcctccagctgcatccatgttgctgcaaaggacataatcttgtgatttttcaaggctgtatagcattctgtgctgtatacataccacattgtctttatccagtccacctctgatgggacctgggtggattccatgtctttgctattgtgaatcctgctgcaatgaacacacaagtacatgtgtctttttggtagaatgatttattttcctttggatatacacccagtgatgggattgctgggctgaatggttactctgtttgtagttctctgaaacatctccaaaccaaactgctttccacagtggctgaactaatttacac--ccaccaacagtgtataagtgtcccctttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103276543 871 - 106955855 tctttttagattcagcagatacatgcgcaggttttt-tatatgagtatattgcatgatgctgaggcttgcattaatgatccagcc--------------------accaaataggtagattttcaagccttgctcccctccttacccaatggttagcgctctcacttataagtgagaacatgtggtatttggttttcttttttc----ttttttttttttttgagaccgagtttcactcttgttgcccaggctggagtataatggcgccatctcggctcactgcaacctccacctcccaggttcaagcaattctcctgcctcagcctcccaagtagttgggactacaggcatgcaccaccacgcccgggtaattttgtatttttagtagagacagggtttcggcatgttggtcaggctggtctcgaactcccgacctcaggtgatccgcctgcctcagcctcccaaagtgctgggatgacaggcatgagccaccgcgtctggccagtatttggttttctgtttctgtgttaactcgcttaggataatggcctctagctgcatccatgttgctgcaaaggacatgatcttgtgatttttcaaggctgtatagcattccatggtgtatacataccacactgtccttatccaatccacctctgatgggacctgggtggattccatgtctttgctatcgtggatcctgccgcaatgaacatacaagtgcgtgtgtctttttggtagaatgacttactttcctttggatatatacccagtaatgggattgctggactgaatggtaactctgtttgtagttctctgaaatatctccaaaca-----gctttctacagtggctgaactaatttacactcccaccaacagtgtataagtgtcccctttg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60562349 874 + 64156825 tctttttagattcagcagatacatgtgcagtttttt---aatgagtatattgcatgatgttgaggcttgcactaatgatccagtcacccaagtagtgagcatattaccaaataggtaaattttcaagccttgctcccctccttacccaatgttta--gctctcacttataagtgagaacatgtggtatgtgg-----------------ttttttttttctttagatggagtttcactcttgttgcccgggttggagtgcaatggcgccatctcggctcaccgcaacctccatctcccagattcaagaaattctcctacctcagcctcctgagtagctgtgattacaggaatgtgccaccacgcccagctaattttgtatttttagtagagacagggtttccacatgttagtcaggctggtctcaagctcccgacctcaggcaatccacctgtctcagcctcccaaagtactggaatgacaggcgtgagccaccgtgtctggccagtatttggttttctgtttctgtgttaactcatttaggataacggcctccagctgcattcatgttgctgcaaaggacataaccttgtgatttttcaaggccctatagcattctgcggtgtatacataacgcattgtctttatccaatccacctctgatgggcactgagttgatgccatgtctttcctattgtgaatcctgctgcaacaaacatacaagtgcatatgtctttttggtagaatgatttattttcctttggatatatacccagtaatgggatggctgggctgaatggtaactctgtttatagtgctctgaaacatctcctaact-----gctttccacagtggctgaactaatttacacgcccaccaacagtgtatcagtgtcccctttg i rheMac3.chr19 C 0 I 2749 s macFas5.chr19 55687952 875 + 59248254 tctttttagattcagcagatacatgtgcagtttttt---aatgagtatattgcatgatgttgaggcttgcactaatgatccagtcacccaagtagtgagcatattaccaaataggtaaattttcaagccttgctcccctccttacccaatgttta--gctctcacttataagtgagaacatgtggtatgtgg----------------tttttttttttctttagatggagtttcactcttgttgcccgggttggagtgcaatggcgccatctcggctcaccgcaacctccatctcccagattcaagaaattctcctacctcagcctcctgagtagctgtgattacaggaatgtgccaccacgcccagctaattttgtatttttagtagagacagggtttccacatgttagtcaggctggtctcaagctcccgacctcaggcaatccacctgcctcagcctcccaaagtactggaatgacaggcgtgagccaccgtgtctggccagtatttggttttctgtttctgtgttaactcatttaggataacggcctccagctgcattcatgttgctgcaaaggacataaccttgtgatttttcaaggccctatagcattctgcggtgtatacataacgcattgtctttatccaatccacctctgatgggcactgagttgatgccatgtctttcctattgtgaatcctgctgcaacaaacatacaagtgcatatgtctttttggtagaatgatttattttcctttggatatatacccagtaatgggatggctgggctgaatggtaactctgtttatagtgctctgaaacatctcttaact-----gctttccacagtggctgaactaatttacacgcccaccaacagtgtatcagtgtcccctttg i macFas5.chr19 C 0 I 2795 s papAnu2.chr19 47801571 874 + 51301725 tctttttagattCAGCAGATACATGTGCAGTTTTTT---AATGAGTATATTGCAGGATGTTGAGGCTTGCACTAATGATccagtcacccaagtagtgagcatatTACCAAATAGGTAAATTTTCAAGCCTTGCTCCTCTCcttacccaatgttta--gctctcacttataagtgagaacatgtggtatgtgg-----------------ttttttatttctttagatggagtttcactcttgttgcccgggttggagtgcaatggcgccatctcggctcaccgcaacctccacctcccagattcaagaaattctcctacctcagcctcctgagtagctgtgattacaggaatgtgccaccacgcccagctaattttgtatttttagtagagacagggtttccacatgttagtcaggctggtctcaagctcccgacctcaggcaatccacctgcctcagcctcccaaagtactagaatgacaggcgtgagccaccgtgtctggccagtatttggttttctgtttctgtgttaactcatttaggataatggcctccagctgcatccatgttgctgcaacgGACATAACCTTGTGATTTTTCAAGGCCGTATAGCATTCTGCGGTGTATACATAACGCATtgtctttatccaatccacctcTGATGGGCACTGAGTTGATgccatgtctttcctattgtgaatcctgctgcaacaaacatacaagtgcatatgtctttttggtagaatgatttattttcctttggatatatacccagtaatgggatggctgggctgAATGGTAACTCTGTTTATAGTGCTCTGAAACATCTCctaact-----gctttccacagtggctgaactaatttacacgcCCACCAACAGTATATCAGTGTCCCctttg i papAnu2.chr19 C 0 I 2476 s chlSab2.chr6 47518430 870 + 50890351 tctttttagattcagcagatccatgtgcagtttttt---aatgagtatgttgcatgatgttgaggcttgcactagtgatccagccacccaagcagtgagcatattaccaaataggtaaattttcaagcctcgctcccctccttacccaacgttta--gctctcacttataagtgagaacatgtgg-atgtgg--------------------ttttcttttttagatagagtttcactcttgttgcccgggttggagtgcaatggcgccatctcggctcactgcaacctccacctcccagattcaagacattctcctacctcagcctcctgagtagctgtgattacaggaatgcgccaccacgcccagctaattttgtatttttagtagagacagggtttccacatgttagtcaggctggtctcaagctcccgacctcaggcaatccacctgcctcagcctcccaaagtactggaatgacaggcgtgagccactgtgtctggccagtatttggttttctgtttctgtgttaactcatttaggataatggcctccagctgcatccatgttgctgcaaaggacataaccttgtgatttttcaaggccgtatagctttctgtggtgtatacataacgcattgtctttatccaatccacctctgatgggcaccgagttgattccatgtctttcctattgtgactcctgctgtaacaagcatacaagtgcatatgtctttttggtagaatgatttattttcttttggatatatacccagtaatgggatggctgggctgaacggtaactctgtttatagtgctctgaaacatctcttaact-----gctttccacagtggctgaactaatttacacgcccaccaacagtgtatcagtgtcccctttg i chlSab2.chr6 C 0 I 2237 e canFam3.chr1 19988006 156 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I a score=226741.000000 s hg38.chr19_GL949747v2_alt 550409 447 + 729520 ctccacaatctcaccagcatctgttaatttctggcttttcagtaatggccattctgactggtgtgagatggtattgttgagggataatttaggaatcagagagaccgaggggttgaggaggatttattattattattattatttaggtgcaccggccccagtcagattaacatccaaaaagactgaggctcgaacagagagtccggttaccttttaagcattttgtggggttgggggagatctgtgcagggggaagcatattacagaagcaagaaacaaaggcagttattcaattgagacatgtatcacattattccttacttttcaa-gaaaaatatgttttacgacttgaggttatcctgtctagtgaccttgcagccgcacggcaagagaaacagggtcttcacaatgcctgggaaagggagagataaggctcactagccacaga s panTro4.chr19 59826689 447 + 63644993 ctccacaatctcaccagcatctgttaatttctggcttttcagtaatagccattctgactggtgtgagatggtattgttgcgggataatttaggaatcagagagaccgaggggttgaggaggatttcttcttattattattatttaggtgcaccggccccagtcggattaacatccaaaaagactgaggctcgaacagagagtccggttaccttttaagcattttgtggggtggggggagatctgtgcagggggaagcatattacagaagcgagaaacaaagacagttattcaattgagacatgcatcacattattccttacttttcaa-gaaaaatatgttttacgacttgaggttatcctgtctggtgaccttgcagctgcacggcaagagaaacagggtcttcacaatgcctgggaaagggagagataaggctcactagccacaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56739924 443 + 60714840 ctccacaatctcgccagcatctgttaatttctgacttttcactaatagccattctgactggtgtgagatggtatTtttgcaggataatttaggaatcagagagaccgaggggttgaggaggat---ttattattattattatttaggtgcaccgg-cccagtcagattaacatccaaaaag-ctgaggcccaaacaaagagtccggttaccttttaagcattttgtggggccgggggagatctgtgcagggggaagcatattacagaagcaagaaacaaagacagttattcaattgagacatgcattacattatttcttacttttcaaggaaaaacatgttttacgacttgaggttatcctgtctagtgaccttacagctgcacagcaagagaaacagggtgttcacaatgcctggaaaagggagagataaggctcactagccacaga i ponAbe2.chr19 C 0 M 475 s nomLeu3.chr10 103277414 444 - 106955855 ctccacaatctcgccagcatctgttaatttctgacttttcagtaatagccattctgactggtgtgagatggtattgttgcgggatagtttaggaatcagagagaccgaggggttgaggaggat---ttattattattattatttaggtgcaccgg-cccagtcagattaacatccaaaaagactgaggcccgaacaaagagtccagttaccttttaagcattttgtcgggcggagggagatctgtgcaagtggaagcatattacagaagcgagaaacaaagatagttattcagttgacacatgcattacattatttcttacttttcaaggaaaaacatgttttacgacttgaggttatcctgtctagtgatcttgcagctgcacagctagagaaacagggtcttcgcaatgcctgggaaagggagagataaggctcactagccacaga i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19988006 156 - 122678785 I e calJac3.chr22 45865945 4013 + 49145316 I e chlSab2.chr6 47519300 2237 + 50890351 I e papAnu2.chr19 47802445 2476 + 51301725 I e macFas5.chr19 55688827 2795 + 59248254 I e rheMac3.chr19 60563223 2749 + 64156825 I a score=24847.000000 s hg38.chr19_GL949747v2_alt 550856 98 + 729520 cagaaaaacaggcagttcatgtttaaaggactccacctctttctcttcctcggggggaactgggttttcttaaatacaactgagtttttgtttacaca s panTro4.chr19 59827136 98 + 63644993 cagaaaaacaggcagtgcatgtttaaaggactctacctctttctcttcctccgggggaactgggttttcttacatacaactgagtttttgtttacaca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103277858 98 - 106955855 cagacaaacaggcagttcatttttaaaggactccacctctttctcttcctcagggggaattgggttttcttacatacaactgagtttttgttcacaca i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19988006 156 - 122678785 I e ponAbe2.chr19 56740367 475 + 60714840 M e calJac3.chr22 45865945 4013 + 49145316 I e chlSab2.chr6 47519300 2237 + 50890351 I e papAnu2.chr19 47802445 2476 + 51301725 I e macFas5.chr19 55688827 2795 + 59248254 I e rheMac3.chr19 60563223 2749 + 64156825 I a score=250576.000000 s hg38.chr19_GL949747v2_alt 550954 146 + 729520 ttctgtaatttcttttaattcctgttccaGTATCTCACTGTGAAACTCCCTATGTTTTTATACGATTCTCAGGGGGTTTCCTC-TGGGCATGATTGGGCACAACTTCCCACAGTCAGCTCTGGGTACGACCTCCACATTGCAGAATT s panTro4.chr19 59827234 146 + 63644993 ttctgtaatttcttttaattcctgttccagtttctcactgtgAAACTCCCTATGTTTTTATACGATTCTCAGGGGGTTTCCTC-TGGGCATGATTGGGCACAACTTCCCACAGTCAGCTCTGGGTACGACATCCACATTGCAGAATT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103277956 146 - 106955855 ttctttaatttcttttaattcctgttccagtatctcactgtgAAACTCCCTATGTTTTTATACGATTCTCAGGGGGTTTCCTC-TGGGCATGATTGGGCACGACTTCCCACAGTCAGCTCCAGGCACGACCTCCACATTGCAGAATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60565972 146 + 64156825 TTCTTTAATTTCTTTTCATTCCTGTTCCAGTATCTCACTGTGAAATTCCCTGTGTTTTTATACGATTCTCGGGGGGTTTCCTC-TGAGCGTCATTAGGCCTGACTTCTCACCGTCAGCTCTGGGTACCACCTTCACATTGCAGAATT i rheMac3.chr19 I 2749 C 0 s macFas5.chr19 55691622 146 + 59248254 ttctttaatttcttttcattcctgttccaGTATCTCACTGTGAAATTCCCTGTGTTTTTATACGATTCTCGGGGGGTTTCCTC-TGAGCGTCATTAGGCCTGACTTCTCACCGTCAGCTCTGGGTACCACCTTCACATTGCAGAATT i macFas5.chr19 I 2795 C 0 s papAnu2.chr19 47804921 147 + 51301725 ttctttaatttcttttcattcctgttcCAGTATCTCACTGTGAAATTCCCTGTGTTTTTATACGATTCTCAGGGGGTTTCCTCTTTTGCGTCATTAGGCCTGACTTCTCACGGTCAGCTCTGGGTACCACCTTCACATTGCAGAATT i papAnu2.chr19 I 2476 C 0 s chlSab2.chr6 47521537 146 + 50890351 ttctttaatttcttttcattcctgttccaGTATCTCACTGTGAAATTCCCTGTGTTTTTATATGATTCTCAGGGGGTTTCCTC-TGAGCGTCATTAGGCCTGACTTCTCACGGTCAGCTCTGGGTACCACCTTCACATTGCAGAATT i chlSab2.chr6 I 2237 C 0 e canFam3.chr1 19988006 156 - 122678785 I e ponAbe2.chr19 56740367 475 + 60714840 M e calJac3.chr22 45865945 4013 + 49145316 I a score=2800.000000 s hg38.chr19_GL949747v2_alt 551100 1 + 729520 G s panTro4.chr19 59827380 1 + 63644993 G i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103278102 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60566118 1 + 64156825 G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55691768 1 + 59248254 G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47805068 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47521683 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45869958 1 + 49145316 G i calJac3.chr22 I 4013 C 0 e canFam3.chr1 19988006 156 - 122678785 I e ponAbe2.chr19 56740367 475 + 60714840 M a score=246493.000000 s hg38.chr19_GL949747v2_alt 551101 93 + 729520 AGAAGTTGACCCAGAAATGCATTTTGGGCTGAGCAGACAATTGTCAGAGTTGCTGGCTAGACCA----------CAGATGTGTCAGAGGGACCACGGCCTTTC s panTro4.chr19 59827381 93 + 63644993 AGAAGTTGACCCAGAAATGCATTTTGGGCTGAGCAGACAATTGTCAGAGTTGCTGGCTAGACCA----------CAGATGTGTCAGAGGGGCCGTGGCCTTTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103278103 93 - 106955855 AGAAGTTGACCCAGAAATGCATTTCGGGCTGAGCAGACAATTGTCAGAGGAGCTGGCTAGGCCA----------CAGCTGTGTCAGAGGGCCTGTGGCCTTTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60566119 93 + 64156825 AGAAGCTGACCCAGAAATGCATTTCAGGCTGAGCAGACAAGTGTCAGGGGAGCTGGCTAGACCG----------CGGATGTGTCAGAGGGACCATGGCCTCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55691769 93 + 59248254 AGAAGCTGACCCAGAAATGCATTTCAGGCTGAGCAGACAAGTGTCAGAGGAGCTGGCTAGACCG----------CGGATGTGTCAGAGGGACCATGGCCTTTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47805069 93 + 51301725 AGAAGCTGACCCAGAAATGCATTTCAGGCTGAGCAGACAAGTGTCAGAGGAGCTGGCTAGACCG----------CAGATGTGTCAGAGGGACCATGGCCTTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47521684 93 + 50890351 AGAAGCTGACCCACAAATGCATTTCGGGCTGAGCAGACAAGTGTCAGAGGAGCTGGCTAGACCG----------CAGACGTGTCAGAGGGACCATGGCCTTTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45869959 93 + 49145316 AGAAGTTGACCCAGAAATGTATTTCAGGCTGAGCAGAAAGTGGTCAGGGGAGCTGGCTAGACCA----------CAGCTGTGTCATAGAGACCATGGCCTTTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19988162 103 - 122678785 AGAAGTGAACCCTGAGATGAGTCTCAGGTGAGGCAGACAATTGTCAGAGGATCTGGTTAGACCACAGAGATGATCAGATATGTCATAGGGACCATGATTTGTC i canFam3.chr1 I 156 C 0 e ponAbe2.chr19 56740367 475 + 60714840 M a score=2648712.000000 s hg38.chr19_GL949747v2_alt 551194 804 + 729520 TGTAAGCTCATGGTCAGA-GGCGGA-GGGGAGTTGTGAACGTTCTGATGAAAGCAGTCAACGTGAAAGCGCTCTGGTGATGGGCGCTGGTG---CTCACCC-ACCACTTCCTGTGTATCTATCTCC----CTGGCCCGCCCGGCTCAGTCCCCA-----CTGCTCAGCACTAGGCCGGCAGAATCTGAGCGATGTCTTCCACACTCCCTGCCCTGCTCTGCGTCGGTGAGTTCTGGCGTGGAAGGGGAATGGGATCACGGTGTGCCTGGGAG-------GCAACAGGTCTCATTACTCCCGTCTTCCAGGGCTGTGTCTGAGTCAGAGGATCAGCGCCCAGCAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTCCGGGTTCAGGCCAAGCTCCT-TCCACCCAAGCACGGCTGGGGAGA-GGGGACA-GGGTGCTGGCTTCCCAGGAGAGCTTGGGGCCAGCAGCTGGGTGGAGCCTAAGGTTGGGGGGAGGGGGCTCCGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGTTCATCTGGGCCGAGCCCCATTTCATGGTTCCAAAGGAAAAGCAAGTGACCATCTGTTGCCAGGGAAATTATGGGGCTGTTGAATACCAGCTGCACTTTGAAGGAAGCCTTTTTGCCGTGGACAGACCAAAACCCCCTGAGCGGATTAACAAAGTCAAATTCTACATCCCGGACATGAACTCCCGCATGGCAGGGCAATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCCCAGCAACTTGCTGGATCTGGTGGTAACAGG----TAACTGT s panTro4.chr19 59827474 800 + 63644993 TGTAAGCTCATGGTCAGA-GGCGGA-GGGGAGTTGTGAACGTTCTGATGAAAGCAGTCAACGTGAAAGCGCTCTGGTGATGGGCGCTGGTG---CTCACCC-ACCACTTCCTGTGTATGT----CC----CTGGCCCGCTGGGCTCAGTCCCCA-----CTGCTCAGCACTAGGCCGGCAGAATCTGAGCGATGTCTTCCACACTCCCTGCCCTGCTCTGCGTCGGTGAGTTCTGGCGTGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACAGGTCTCATTACTCCCGTCTTCCAGGGCTGTGTCTGAGCCAGAGGATCAGCGCCCAGCAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACCCTTCCTGGTTCAGGCCAAGCTCCT-TCCACCCAAGCACGGCTGGGGAGA-GGGGACA-GGGTGCTGGCTTCCCAGGAGAGCTTGGGGCCAGCAGCTGGGGGGAGCCTAAGGTTGGGGGGAGGGGGCTCCGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGTTCATCTGGGCCGAGCCCCATTTCATGGTTCCAAAGGAAAAGCAAGCGACCATCTGTTGCCAGGGAAATTATGGGGCTGTTGAATACCAGCTGCACTTTGAAGGAAGCCTTTTTGCCGTGGACAGACCAAAAGCCCCTGAGCGGATTAACAAAGTCAAATTCTACATCCCGGACATGAACTCCCGCATGGCAGGGCAATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCCCAGCAACTTGCTGGATCTGGTGGTAACAGG----TAACTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56740843 800 + 60714840 TGTAAGCTCATGGTCAGAGGGCGGA-GGGGTGTTGTGAGCGTTCTGATGAAAACAGTCAACATGAAAGCGC-CTGGTGATGGGCGCTGGTG---CTCACCC-ACCACTTCCTGTGCATCT----CC----CTGGCCTGCTGGGCTCAGTCCCCA-----CTGCTCAGCACTAGGCCGGCAGAATCTGAGCGATGTCTTCCACACTCCCTGCCCTGCTCTGCGTCGGTGAGTTCTTGAATGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACAGGTCTCATTACTCCCGTCTTCCAGGGCTGTGTCTGAGCCAGAGGATCAGCACCCAGCAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTTGGGGTTCAGGCCAAGCTCCC-TCTACCCAAGCACAGCTGGGGAGA-GGGGGCA-GGATGCTGGCTTCCCAGGAGAGCTTGGGGCCAGCAGCTGGGTGGAGCCTAGGGTTGGGGGGAGAGGGCTCAGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGTTCATCTGGGCCGAGCCCCATTTCATGGTTCCAAAGGAAAAGCAAGCGACCATCTGTTGCCAGGGAAATTATGGGGCTGTTGAATACCAGCTGCATTTTGAAGGAGGCCTTTTTGCCGTGGAGAGACCAAAACCCGCTGAACGGATTAACAAAGTCAAATTCTACATCCCGGACATGAACTCCCGCACAGCAGGGCAATACAGCTGCATCTATAGGGTTGGGGAGCTCTGGTCAGAGCCCAGCAACGTGCTGGATGTGGTGGTAACAGG----TAACTGT i ponAbe2.chr19 M 475 C 0 s nomLeu3.chr10 103278196 805 - 106955855 TGTAAGCTCATGGTCAGA-GGCGGA-GGGGAGTTGTGAACGTTCTGATGAAAAAAGTCAACATGAAAGCGCTTTGGTGATGGGCGCTGGTG---TTCATCCAACCACTTCCTGTGCATCT----CCCCGTCCGTCCAGCTGGGCTCAGTCCCCA-----CTGCTCAGCACTAGGCCGGCAGAATCTGAGCAATGTCTTCCACACTCCCTGCCCTGCTCTGCGTCGGTGAGTTCTTGCATGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACAGGTCTCATTATTCCCGTCTTCCAGGGCTGTGTCTGAGCCAGAGAATCAGCGCCCAGCAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTCCGGGTTCAGGCCAAGCTCCC-TCCACCCAAGCACGGCTGGGGAGA-GGGGGCA-GGGTGCTGGCTTCCCAGGAGGGCTTGGGGCCAGCAGCTGGGTGGAGCCTAGGATTCCGGGGAGGGGGCTCAGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGTTCATCTGGGCCGAGCCCCATTTCATGGTTCCAAAGGAAAAGCAAGTGACTATCTGCTGCCAGGGAAATTATGGGGCTGTTGAATACCAGCTGCATTTTGAAGGAAGCCTTTTTGCCGTGGAGAGACCAAAACCCCCTGAACGGATTAACAAAGTCAAATTCTACATCCTGGCCATGAACTCCCGCACGGCAGGGCAATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCCCAGCAACTGGCTGGATCTGGTGGTAACAGG----TAACTGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60566212 807 + 64156825 CGTAGGCTCATGGTCAGA-GGTGGAGGGGGAGTGGTGAACGTTCTAATGAAAAAAGTCAACATGAAAGCTTCCTGGCGATGGGCGCTGGGG---CTCAGCC-ACCACTTCCTGTGCATCT----CC----CTGGCCCGCTGGGCTCAGTCCCCACCCCGCTGCTCAGCACTCGGCCGGTAGAATCTGAGCGATGTCTTCCACGCTCCGTGCCCTGCTCTGCCTTGGTGAGTTCCTGCATGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACGGGTCTCATTATTCCCGTCTTCCAGGGCTGTGTCTGAGCCAGAGAATCAGCGCCCCAAAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTTCGGGTTCAGGCCAAGCACCC-TCCACCCAAGCACGGCTGGGGAGAGGGGGGCG-GGGTGCTGGCTTCCCAGGAGGGCCTGGGGCCAGCAGCAGGGTGGAGCCTATGGTTGGGGGGACGGGGCTCAGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGATCATCAGGGCTGAATCCACTTACATGGTTCCGAAGGAAAAGCAAGCGACCCTCTGTTGCCAGGGAAGTTATGGAGCTGTTGAATACCAGCTGCATTTTGAAGGAAGCCTTTTTGCCGTGGAGAGACCAAAACCGCCTGAACGGATTAATGGAGTCAAATTCCACATCCCGGACATGAACTCCCGCAAGGCAGGGCGATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCGCAGCGACTTGCTGGATCTGGTGGTAACAGG----TAACTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55691862 807 + 59248254 CGTAGGCTCATGGTCAGA-GGTGGAGGGGGAGTGGTGAACGTTCTAATGAAAAAAGTCAACATGAAAGCTTCCTGGCGATGGGCGCTGGGG---CTCAGCC-ACCACTTCCTGTGCATCT----CC----CTGGCCCGCTGGGCTCAGTCCCCACCCCGCTGCTCAGCACTCGGCCGGTAGAATCTGAGCGATGCCTTCCACGCTCCATGCCCTGCTCTGCCTTGGTGAGTTCCTGCATGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACGGGTCTCATTATTCCCGTCTTCCAGGGCTGTGTCTGAGCCAGAGAATCAGCGCCCCAAAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTTCGGGTTCAGGCCAAGCACCC-TCCACCCAAGCACGGCTGGGGAGAGGGGGGCG-GGGTGCTGGCTTCCCAGGAGGGCCTGGGGCCAGCAGCAGGGTGGAGCCTATGGTTGGGGGGATGGGGCTCAGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGATCATCAGGGCTGAATCCACTTACATGGTTCCGAAGGAAAAGCAAGCGACCCTCTGTTGCCAGGGAAGTTATGGAGCTGTTGAATACCAGCTGCATTTTGAAGGAAGCCTTTTTGCCGTGGAGAGACCAAAACCGCCTGAACGGATTAATGGAGTCAAATTCCACATCCCGGACATGAACTCCCGCAAGGCAGGGCGATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCGCAGCGACTTGCTGGATCTGGTGGTAACAGG----TAACTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47805162 806 + 51301725 CGTAGGCTCATGGTCAGA-GGTGGAGGGGGAGTGGTGAACGTTCTAATGAAAAAAGTCAACATGAAAGCTTCCTGGCGATGGGCGCTGGGG---CTCACCC-ACCACTTCCTGTGCATCT----CC----CTGGCCCGCTGGGCTCAGTCCCCACCCCGCTGCTCAGCACTCGGCCGGTAGAATCTGAGCGATGCCTTCCACGCTCCGTGCCCTGCTCTGCCTCGGTGAGTTCCTGCATGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACGGGTCTCATTATTCCCGTCTTCCAGGGCTGTGTCTGAGCCAGAGAATCAGCGCCCCGAAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTTCGGGTTCAGGCCAAGCACCG-TCCACCCAAGCACAGCTGGGGAGA-GGGGGCG-GGGTGCTGGCTCCCCAGGAGGGCCTGGGGCCAGCAGCAGGGTGGAGCCTACGGTTGGGGGGACGGGGCTCAGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCCATCATCAGGGCCGAATCCACTTACATGGTTCCGAAGGAAAAGCAAGCGACCCTCTGTTGCCAGGGAAGTTATGGAGCTGTTGAATACCAGCTGCATTTTGAAGGAAGCCTTTTTGCCGTGGAGAGACCAAAACCGCCTGAACGGATTAATGGAGTCAAATTCCACATCCCGGACATGAACTCCCGCAAGGCAGGGCAATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCGCAGCGACTTGCTGGATCTGGTGGTAACAGG----TAACTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47521777 810 + 50890351 CGTAGGCTCATGGTCAGA-GGTGGAGGGGGAGTGGTGAACGTTCTAATGAAAAAAGTCAACATGAAAGCTTCCTGGTGATGGGCGCTGGGG---CTCACCC-ACCACTTCCTGTGCATCT----CC----CTGGCCCGCTGGGCTCAGTCCCCACCCCGCTGCTCAGCACTCGGCCGGTAGAATCTGAGCGATGCCTTCCACGCTCTGTGCCCTGCTCTGCCTCGGTGAGTTCTTGCATGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACAGGTCTCATTATTCCCGTCTTCCAGGGCTGTGTTTGAGCCAGAGAATCAGCACCCCGAAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTTCGGGTTCAGGCCAAGCACCC-TCCACCCAAGCACGGCTGGGGAGA-GGGGGCG-GGGTGCTGGCTTTCCAGGAAGGCCTGGGGCCAGCAGCAGGGTGGAGCCTACGGTTGGGGGGACGGGGCTCAGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGATCATCAGGGCCGAATCCACTTACATGGTTCCAAAGGAAAAGCAAGCAACCCTCTGTTGCCAGGGAAGTTATGGAGCTGTTGAATACCAGCTGCATTTTGAAGGAAGCCTTTTTGCCGTGGAGAGGCCAAAACCGCCTGAACGGATTAATGGAGTCAAATTCCACATCCCGGACATGAACTCCCGCAAGGCAGGGCGATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCGCAGCGACTTGCTGGATCTGGTGGTAACAGGTAACTAACTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45870052 789 + 49145316 TGTAGGCTCACGGTCAGA-GGTGGA-GGGGAATTGTGAA-GTTCTTATGAAAAAAGTCAACGTGAAAGCCACATGGTAATGAGGGTTGGC----CTCATCT-ACCACTTCCTCTGCATCT----CC----CTGGCACACTGGGCTCAGTCACTACCCCACT------------GCCAGCAGAATCTGAGCGATGCCTTCCACACTCCCTGCCCTGCTCTGCCTCGGTGAGTTCTTGCCCGGATGGGGAATGGAATCAGGGTGTGCCTGGGAA-------GCAATAGGTCTCATTATTCCCATCTTGCAGGGCTGTGTCTGAGCCAGAGGATCAGCACCCAGCAGCGTGAGTCCTTCCTTCAAAGCT-TAGGGTCACTCTTACGGGTTCAGGCCAAGCACCC-TCCACCCAAATACAACTGGGAAGA-GGGGACA-GGGTGCGGGCTTCCCAGGAGGACTTAGGGCCAGCAGCTGGGTGGAGCCTAGGGT--GGGAAGGTGGGCTCAGCTGGGACTCCAGCATCTGATTCCCTTCCAGAGACTCTCCCAAAACCCTCCATCTGGGCCAAGCCCAGTTTCATGGTTCCAAAGGAAAAGCCGGCGACCATCTCTTGCCAGGGAAATTATGGGGCTGTTGAATACCAGCTGCATTTTGAAGGAAGTCTTTCTGCCGTGGAGAGACCAAAACCCCCTGAGCGCATTAACAAAGTAGAGTTTCACATCCCGGCCATGACGTCCCGCACGGCCGGGCGATACAGCTGCTTCTATCGGGTTGGGGAGCTCTGGTCAGAACCTAGCGACTCACTGGATCTGGTGGTAACAGG----TAAGTGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19988265 793 - 122678785 -------TCATGGTCAAA--GTACAGGGAAGACTGTGAGCCTTCTTAT--AAAAAGTCAGTGTGAAAGCCCCATGTCAAATAGTGTTGTTGGGCTTCACCC-ACCACATCCTGTGCA-CT----TA----CTGGCCTGCTGGGCTCAGTCTCCACTCAGCTCCTCCATATGTGCCTGGTATAATCAGTGCTATGACCTCTACACTCACTGCCCTTCTCTTCCTTGGTGAGTTCTTGCACACAGGGGAAACAGAATTCGGGAGT--CTGGGTGTGGGTGAGCGGCATGTCTCATTGTTCCTGTCTTCCAGGGCTGTACCTGAGCCAGACCACCAGCACCCAGAAGCGTGAGTCCCTTCTTCAGAGCCTCAGAATCTCTCTTCTGGGCTCAGATGCAGTATCTATCTATGAAACCAAAG-------GA-GGGGGCAGGGGCTCTGGTTTGCTAGGAGGGCTTGAGGCCAACA---GGGTAGAAATTTGCGT---GGGAAGGGACTTTATCTGGAACTCCAGCCTCTGATTCTCTTCCAGAGATTCTTTCAAAACCCATCATCTGGGTCAAGCCAAATTTCATGATTCCAAAGGGAATGCCAGTGTTGATCTGGTGCCAGGGGACTCCTGAGGCCATTGAATATCAGCTGCATCTTGAAGGACATCTCTATGCCCAGCAGAGCCCAAAACAACTTGAAAGGAGGAACACAGTCATGTTCCGCATCCCAAAAATGACCCTGCTCACTGCAGGGCAATACAGGTGCTTTTACCGAATCAAGGAGCTCTGGTCAAAGCCTAGTGACCCTCTGGATCTGGTGGTAACAGG----TAACTAT i canFam3.chr1 C 0 I 83 a score=457445.000000 s hg38.chr19_GL949747v2_alt 551998 166 + 729520 CCGGTTCTCTAACTGGAGAGTGATCTCAGTCTGCATCCGGGATGCAGCATCATCTATGAACTCTTCCAAGCCCCACTCAGACACTGCTTGTCTCGGTAGGAGGCTGGAAGGAGGGGTGATCCCCATCACAATCCTTGCCTACAAGGGGTTGTCTGCAGACCGTGTC s panTro4.chr19 59828274 164 + 63644993 CCGGTTCTCTAACTGGAGAGTGATCTCAGTCTGCATCCGGGATGCAGCAGCATC--TGAACTCTTCCAAGCCCCACTCAGACACTGTTTGTCTCGGTAGGAGGCTGGAAGGAGGGGTGATCCCCATCACAATCCTTGCCTACAAGGGGTTGTCTGCAGACCGTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56741643 163 + 60714840 CCGCTTCTCTAACTGGAGAGTGATCTCAGTCTGCATCCGGGATACAG---CATCTATGAACTCTTCCAAGCCCCACTCAAACGCTGCTTGTCTCGGTAGGAGGCTGGGAGGAGGGGTGATCCCCATCACAGTCCTTGCCTACAAGGGGTTGTCTGCAGACGGTGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103279001 166 - 106955855 CCGGTTCTCTAACTGGAGAGTGATCTCCGTCTGCATCCGGGATGGAGCATCATCTATGAACTCTTCCAAGCCCCATTCAGACCCTGCTTGTCTCGGTAGGAGGCTGGGAGGAGGGGTGATCCCCATCACAATCCTTGCCTACAAGGGGTTGTCTGCAGACAGTGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60567019 165 + 64156825 CCGGTTCTCTAACTGGAGAGTGAGCTCAGTCTGCATCCGGGATGGAGCATCATCTATAAACTCTTCCAAGCCCCACTCAGACACTGCTTGTCTCGGTAGGAGGTTGG-AGGAGGGGTGATCCCCATCACAATCTCAGCCTACAAGGCGTTGTCTGCAGACAGTGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55692669 165 + 59248254 CCGGTTCTCTAACTGGAGAGTGAGCTCAGTCTGCATCCAGGATGGAGCATCATCTATAAACTCTTCCAAGCCCCACTCAGACACTGCTTGTCTCGGTAGGAGGTTGG-AGGAGGGGTGATCCCCATCACAATCTCAGCCTACAAGGCGTTGTCTGCAGACAGTGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47805968 165 + 51301725 CCGGTTCTCTAACTGGAGAGTGAGCTCAGTCTGCATCCGGGATGGAGCATCATCTATAAACTCTTCCAAGCCCCACTCAGACACTGCTTGTCTCGGTAGGAGGTTGG-AGGAGGGGTGATCCGCATCACAATCTCAGCCTACAAGGCGTTGTCTGCAGACAGTGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47522587 164 + 50890351 CCGGTTCTCTAACTGGAGAGTGAGCTCAGTCTGCATCTGGGATGGAGCATCACCTATGAACTCTTCCAAGCCCCACTCAGACACTGCTTGTCTCAGTAGGAGGTTGG-AGGAGGGGTGATCC-CATCACAATCTCAGCCTACAAGGCGTTGTCTGCAAACAGTGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45870841 164 + 49145316 CCCGCTCCGTAACTGGAGAGTCAGCTCAGTCTACCGCCGGGATGGAGCCTCATCTATTAACTCTTCCAAGCCCCACTCAGACGCTGCTTCTCTCGGAAGGAGGTTGGGTGGACGGATG-TACTCATCAC-GTCCCTGCCTACAAGGGCTTGTCTGCAGACAGCGTC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19989058 83 - 122678785 I a score=146029.000000 s hg38.chr19_GL949747v2_alt 552164 42 + 729520 TCTACGTCCTAGGAGCAGATGTGTCCTCAGTCAGTTTCTCCA s panTro4.chr19 59828438 42 + 63644993 TCTACATCCTAGGAGCAGATGtgtcctcggtcagtttctcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56741806 42 + 60714840 TCTACGTCCTAGGCGCAGATGTGTCCTCAGTCAGTTTCTCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103279167 42 - 106955855 TCTATGTCCTAGGAGCAGATGtgtcctcggtcagtttctcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60567184 42 + 64156825 TCTATGTCCTATGAGCAGATGtgtcctcggtcaagttctcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55692834 42 + 59248254 TCTATGTCCTATGAGCAGATGTGTCCTCGGTCAAGTTCTCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47806133 42 + 51301725 TCTATGTCCTACGAGCAGATGTGTCCTCGGTCAAGTTCTCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47522751 42 + 50890351 TCTGTGTCCTACGAGCAGATGTGTCCTCGGTCAAGTTCTCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45871005 42 + 49145316 TCTATGTCCTAGCAGCAGATGtgtcctcggtcaagttctcca i calJac3.chr22 C 0 C 0 s canFam3.chr1 19989141 42 - 122678785 TCTATGACCTAGAGGCAGATTTGTCATAGGTCAGGTTCTCCA i canFam3.chr1 I 83 I 1526 a score=977276.000000 s hg38.chr19_GL949747v2_alt 552206 359 + 729520 TGACACAGATTCTGAGATAGATATTTGTATGCAGGGGTATGACTGAGGAATGTCCTCAAAAACAATGCCTGTGGGCTAGGCGCAGTGGCTTACACTTTGCTTCCCTCACCCATCACAGGTGGT-GGGttt---------tttttttttttatctgttttgagacggagtttcgctcttgtcacccaggctggagtgcagtggtgcaatctccagtcactgcaacctccacctcctgggttcaagtgattctccagcctcagcttcccaagtagctgggatcacaggcacccaccactac-----gccacattttgtatttttagtagagatggggtttcaccatgttggccagggtggtgtcgaactcctgacc s panTro4.chr19 59828480 359 + 63644993 agacacagattctgagatagatatttgtgtgcaggggtatgactgaggaatgtcctcaaaaacaatgcctgtggGCCAGGCGCAGTGGCTTACACTTTGCTTCCCTCACCCATCACAGGTGGT-GGGGtt---------tttttttttttatctgttttgagacggagtttcgctcttgtcacccaggctggagtgcagcggtgcaatctccagtcactgcaacctccacctcctgggttcaagtgattctccagcctcagcttcccaagtagctgggattacaggcacccaccactac-----gccagattttgtatttttagtagagatggggtttcaccatgttggccagggtggtctcgaactcctgacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56741848 338 + 60714840 AGACACAGATTCTGAGATAGATATTTGTGTGC-------------AGGAATGTCCTCAAAAACAACGCCTGTGGGCCAGGCGCAGTGGCTTACAC--TGCTTCCCTCACCCATCACAGGTGTT-GGAG---------------ttttttaatctgttttgagacggagtttcactcttgtcacccaggctggagtgcagtggtgcaatctccagtcactgcaacctccacctcctgggttcaagcgattctccagcctcagcttcccaagtagctgggattacaggcacccaccaccat-----gccagtttttgtatttttagtagagatggggtttcaccatgttgaccagggtggtctcaaactcctgacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103279209 353 - 106955855 agacatagattctgagatagatatttgggtgcaggggtataactgaggaatgtcctcaaaaacaacacctgtggGCCAGGCGCAGTGGCTTACACTTTGCTTCCCTCACCCATCACAGGTGGT-GGGG--------------ttttttttatctgttttgagatggagtttcgttcttgtcacccaggctggagtgcagtggtgcaatctccagtcact-caacctccacctcctgggttcaagcgattctccagcctcagcttcccaagtagctgggattacaggcacccaccaccat-----gccagtttttgtatttttagtagagatggggtttcaccatgttggccagggtggtctcgaactcctgacc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60567226 352 + 64156825 agacacagattctgagatagatatttgtgtgcaggggtatgactgaggaacgtcctcaaaaacaacgcctgtggGCCAGGCGCAGTGGCTAACACTTTGCTTCCCTCACCCATCACAGGTGGT-GGGG---------------tttttgtgtttgttttgaga-agagtttcactcttgtcacccaggttggagtgcaatggtgcagtctcccatcactgcaacctccacctcctgggttcaagtgattctccagcctcagcttcccaagtagctgggattacaggcgcccaccaccac-----gccaatttttgtatttttggtagagacagggtttcactatgttgaccagggtggtctcaaacttctgacc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55692876 352 + 59248254 AGACACAGATTCTGAGATAGATATTTGTGTGCAGGGGTATGACTGAGGAACGTCCTCAAAAACAACGCCTGTGGGCCAGGCGCAGTGGCTAACACTTTGCTTCCCTCACCCATCACAGGTGGT-GGGG---------------tttttgtgtttgttttgaga-agagtttcactcttgtcacccaggttggagtgcaatggtgcagtctcccatcactgcaacctccacctcctgggttcaagtgattctccagcctcagcttcccaagcagctgggattacaggcgcccaccaccac-----gccaatttttgtatttttggtagagacagggtttcactatgttgaccagggtggtctcaaactcctgacc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47806175 351 + 51301725 AGACACAGATTCTGAGATAGATATTTGTGTGCAGGGGTATGACTGAGGAATGTCCTCAAAAACAACGcctgt-ggccaggcgcagtggctaacacTTTGCTTCCCTCACCCATCACAGGTGGT-gggg---------------tttttgtgtttgttttgaga-agagtttcactcttgtcacccaggttggagtgcaatggtgcagtctcccatcactgcaacctccacctcctgggttcaagtgattctccagcctcagcttcccaagtagctgggattacaggcgaccaccaccac-----gccaatttttgtatttttggtagagacagggtttcactatgttgaccagggtggtctcaaactcctgacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47522793 350 + 50890351 AGACACAGATTCTGAGATAGATATTTGTGTGCAGGGGTGTGACTGAGGAACGTCCTCAAA---AACGCCTGTGGGCCAGGCGCAGTGGCTGACACTTTGCTTCCCTCACCCATCACAGGTGGTGGGGG---------------tttttgtgtttgttttgaga-ggagtttcactcttgtcacccaggttggagtgcagtggtgcagtctcccgtcactgcaacctccacctcctgggttcaagtgattctccagcctcagcttcccaagtggctgggatgacaggcgcccaccaccac-----gccaatttttgtatttttggtagagacagggtttcactatgttgaccagggtggtctcaaactcctgacc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45871047 370 + 49145316 agaaacagattctgagatagatatttgtgtgcaggagggtgactgacaaatgtcctcaacagcatcgcctgtggGCCAGGCGCAGTGGCTTAGGCCTTGCTTTCCTCATCCATCACAGGTGAT-GGGTTTAAAAAAATATATTTTGGCtttttttttttcaga--cagtcttgctctgctc-cccaggctggagtgcagtggtgcaatctcagctcactgccacctctacctcctggattcaagcaattatcctgcctcggtctcccaagtagttgggactacaggcacctgccaccatgtctggctaatttttgcatttttagtagggatgggatttcaccatgtcagccaggctggtctcgaactcctgacc i calJac3.chr22 C 0 I 487 e canFam3.chr1 19989183 1526 - 122678785 I a score=208965.000000 s hg38.chr19_GL949747v2_alt 552565 92 + 729520 tcagatgatccgcccgcctcaccctcccaaagtgctgggattacaggtgtgagccatcacacccagccAGGTGGTGGTTTTCTAAAAAAAAA s panTro4.chr19 59828839 92 + 63644993 tcagatgatccgcctgcctcaccctcccaaagtgctgggattacaggtgtgagccatcgcgcctagccAGGTGGTGTTTTTCTAAAAAAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742186 92 + 60714840 tcagatgatccgcctgcctcaccctcccaaagtgctgggattacaggtgtgagccattgcgcccagccAGGTGGTGGTTTTCTAAAAAAAAA i ponAbe2.chr19 C 0 I 4 s nomLeu3.chr10 103279562 89 - 106955855 tcagatgatccgcccgcctcaccctcccaaagtgctgggattacaggtgtgagccatcgcgcccagccAGGTGGTGTTTTTCTAAAAAA--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60567578 89 + 64156825 tcaggtgatcctcccgcctcagcctcccaaagtgctgggattacaggtgtgagccatcgcgcctggccAGGTGGTGTTTTTCTAAAAAA--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55693228 89 + 59248254 tcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccatcgcgcctggccAGGTGGTGTTTTTCTAAAAAA--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47806526 88 + 51301725 tcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtgagcc-tcacACCTGGCCAGGTGgtgtttttctaaaaaa--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47523143 89 + 50890351 tcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtgagtcatcgcgcctggccAGGTGGTGTTTTTCTAAAAAA--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I a score=-2736.000000 s hg38.chr19_GL949747v2_alt 552657 2 + 729520 -AA s panTro4.chr19 59828931 2 + 63644993 -AA i panTro4.chr19 C 0 I 6 s nomLeu3.chr10 103279651 2 - 106955855 -AA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60567667 2 + 64156825 CA- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55693317 2 + 59248254 CA- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47806614 2 + 51301725 ca- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47523232 2 + 50890351 CA- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e ponAbe2.chr19 56742278 4 + 60714840 I e calJac3.chr22 45871417 487 + 49145316 I a score=29230.000000 s hg38.chr19_GL949747v2_alt 552659 22 + 729520 AAAATTAGCTTTTTTTTTtttt s nomLeu3.chr10 103279653 22 - 106955855 AAATTTAGCttttttttttttt i nomLeu3.chr10 C 0 I 116 s rheMac3.chr19 60567669 22 + 64156825 AAATTTAGCttttttttttttt i rheMac3.chr19 C 0 I 592 s macFas5.chr19 55693319 22 + 59248254 AAATTTAGCttttttttttttt i macFas5.chr19 C 0 I 502 s papAnu2.chr19 47806616 22 + 51301725 aaatttagcttttttttttttt i papAnu2.chr19 C 0 I 498 s chlSab2.chr6 47523234 22 + 50890351 AAATTTAGCttttttttttttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e ponAbe2.chr19 56742278 4 + 60714840 I e calJac3.chr22 45871417 487 + 49145316 I e panTro4.chr19 59828933 6 + 63644993 I a score=91.000000 s hg38.chr19_GL949747v2_alt 552681 1 + 729520 a s chlSab2.chr6 47523256 1 + 50890351 a i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e ponAbe2.chr19 56742278 4 + 60714840 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567691 592 + 64156825 I e panTro4.chr19 59828933 6 + 63644993 I a score=0.000000 s hg38.chr19_GL949747v2_alt 552682 1151 + 729520 acaatatggttgtttattattattatcaagtattatacatagttacatatacatacataattgtatgtgctatacaattaggtttgtttataccagcaacaccaaaaacacatgagcaatactttgtgctaggaaggctatgatgtcatcaggcaataggaatttttcagtttcattataatcttatgggaccaccatcatatatgtggtacattgttggccaaaatgtcattatgcagcTCacaacagtatttcatgtccattcaaatatcttcttttgtgaaatgtctatttaaatcttttgcctatttttaaattgggttgcttatattttgattgattaggaaaagttatttctatattctgtgtcatatacttgtgttgaaatatatatattttttgtctgtgccttttcatttgctcagggtctttggaccttgtttggaggttctggcaggggaacacagctactcattTAttcttttttttttaatttttttagtatttattgatcattcttgggtgtttctcggagagggggatttggcagggtcataggacaatagtggagagaaggtcagcagataaacatgtgaacaaaggtctctggctttcctaggcagaggtccctgcggccttccgcagtgtttgtgtccctgggtacttgagattagggagtggtgatgactcttaaggagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccgcccttaatccatttaaccctgagtggacatagcacatgtttcagagagcacggggttgggggtaaggtcatagattaacagcatcccaaggcagaagaatttgtcttagtacagaacaaaatggagtctcctatgtctacttctttctacacagacacagtaacaatctgatctctctttcttttccccacatttcccctttttctattcgacaaaaccgccatcgtcatcatggcccattctcaatgagctgttgggtacacctcccagacggggtggcggccgggcagaggggctcctcacttcccagacggggcggccgggcagaggcgcccccccacctcccagacggggcagtggccgggcgggggctgccccccaacctcccggacggggcggctggccggg e canFam3.chr1 19989183 1526 - 122678785 I e ponAbe2.chr19 56742278 4 + 60714840 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e chlSab2.chr6 47523257 0 + 50890351 C e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567691 592 + 64156825 I e panTro4.chr19 59828933 6 + 63644993 I a score=655.000000 s hg38.chr19_GL949747v2_alt 553833 7 + 729520 gcttttt s ponAbe2.chr19 56742282 7 + 60714840 GCttttt i ponAbe2.chr19 I 4 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e chlSab2.chr6 47523257 0 + 50890351 C e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567691 592 + 64156825 I e panTro4.chr19 59828933 6 + 63644993 I a score=3332.000000 s hg38.chr19_GL949747v2_alt 553840 13 + 729520 ttttttttttttg s panTro4.chr19 59828939 13 + 63644993 ttttttttttctg i panTro4.chr19 I 6 C 0 s ponAbe2.chr19 56742289 13 + 60714840 ttttttttttttg i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e chlSab2.chr6 47523257 0 + 50890351 C e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567691 592 + 64156825 I a score=30025.000000 s hg38.chr19_GL949747v2_alt 553853 56 + 729520 agacagtctcgctgcagtgcagtggtacaatctcagctcactgcaacctc--tgcctc s panTro4.chr19 59828952 58 + 63644993 ggacagtctcgctgcagtgcagtggtgcaatctcagctcactgcaacctcactgcctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742302 56 + 60714840 agacagtctcgctgcagtgcagtggtgcaatctcagctcactgcaacctc--tgcctc i ponAbe2.chr19 C 0 I 14 s chlSab2.chr6 47523257 56 + 50890351 agacagtctcgctgcagtgcagtggtacaatctcagctcactgcaacctc--tgcctc i chlSab2.chr6 C 0 I 14 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567691 592 + 64156825 I a score=-172.000000 s hg38.chr19_GL949747v2_alt 553909 8 + 729520 --agcctcaa---- s panTro4.chr19 59829010 14 + 63644993 ccaggttcaagcaa i panTro4.chr19 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e ponAbe2.chr19 56742358 14 + 60714840 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e chlSab2.chr6 47523313 14 + 50890351 I e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567691 592 + 64156825 I a score=64852.000000 s hg38.chr19_GL949747v2_alt 553917 124 + 729520 ttctcctgcctcagcctcccaagtagttgagattacaggcatgtgccaccacacccggctaatttttgcatttttagtagagacggggtttcaccatgttgaccaggctggtctcaaactcctg s panTro4.chr19 59829024 124 + 63644993 ttctcctgcctcagcctcccaagtagttgggattacaggcatgggccaccacacccggctaatttttgcatttttagtagagacggggtttcaccatgttgaccagtctggtctcaaactcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742372 124 + 60714840 ttctcctgcctcagcctcccaagtagttgcaattacaggcatgggtcaccacacccggctaatttttgcatttttagtagagacagggtttcaccatgttgaccaggctggtctcaaactcctg i ponAbe2.chr19 I 14 C 0 s chlSab2.chr6 47523327 124 + 50890351 ttctcctgcctcagcctcccaagcagttgggtttacaggcataggccaccacgcctggctaatttttgcatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactcctg i chlSab2.chr6 I 14 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567691 592 + 64156825 I a score=88498.000000 s hg38.chr19_GL949747v2_alt 554041 94 + 729520 acccaggaggtcgagtcttcagtaagcaaagatagtgccacggcgctccagcctgggaaacagagcaagaccctgtatc---------atttTTAAAAATGGT s panTro4.chr19 59829148 94 + 63644993 acccaggaggtcgaggcttcagtaagccaagatagtgccacggcgctccagcctggggaacagagcaagaccctgtatc---------aTTTTTTAAAATGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742496 89 + 60714840 acccaggaggttgaggcttcagtaagccaagatagtgccacggcgctccagcctggggaacacagcaagaccctgtatc---------attttaaaaa----- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55693843 100 + 59248254 acccaggaggtagaggttgcagtgaaccgagattgtgccattgcactccagcctgggtgacagagcaagactccatctc---aaaaaaaaaaaaacaaaTGGT i macFas5.chr19 I 502 C 0 s papAnu2.chr19 47807136 103 + 51301725 acccaggaggtagaggttgcagtgagccgagattgtgccactgcactccagcctgggtgacagagcaagactccgtctcaaaaaaaaaaaaaaaaaaaatggt i papAnu2.chr19 I 498 C 0 s chlSab2.chr6 47523451 94 + 50890351 acccaggaggtcgaggcttcagtgagccaagatagtgccatggcactccagcctggggaacagagcgaggccctgtacc---------attttaaaaaaTGGT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e rheMac3.chr19 60567691 592 + 64156825 I a score=74473.000000 s hg38.chr19_GL949747v2_alt 554135 47 + 729520 TTTAGACGGTAAATCTTCTATTGTGTGTAtttgaccaaaataataat s panTro4.chr19 59829242 47 + 63644993 TTTAGATGGTAAATCTTCTATTGTGTGTATTTGACCAAAATAATAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742585 36 + 60714840 -----aCGGTAAATCTTCTATTGTGTGTATTTGACCaaaaa------ i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60568283 47 + 64156825 TTTAGATGGTAAATCTTCTATTGTGTGTATTTGACCaaaataataat i rheMac3.chr19 I 592 I 4 s macFas5.chr19 55693943 46 + 59248254 -TTAGATGGTAAATCTTCTATTGTGTGTATTTGACCAAAATAATAAT i macFas5.chr19 C 0 I 556 s papAnu2.chr19 47807239 46 + 51301725 -ttagatGGTAAATCTTCTATTGTGTGTATTTgaccaaaataataat i papAnu2.chr19 C 0 I 10 s chlSab2.chr6 47523545 46 + 50890351 -TTAGATGGTAAGTATTCTATTGTGTGTATTTGACCAAAATAATAAT i chlSab2.chr6 C 0 I 1 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I a score=91.000000 s hg38.chr19_GL949747v2_alt 554182 1 + 729520 t s panTro4.chr19 59829289 1 + 63644993 T i panTro4.chr19 C 0 I 8 e canFam3.chr1 19989183 1526 - 122678785 I e ponAbe2.chr19 56742621 0 + 60714840 C e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e chlSab2.chr6 47523591 1 + 50890351 I e papAnu2.chr19 47807285 10 + 51301725 I e macFas5.chr19 55693989 556 + 59248254 I e rheMac3.chr19 60568330 4 + 64156825 I a score=4095.000000 s hg38.chr19_GL949747v2_alt 554183 3 + 729520 aaa s panTro4.chr19 59829298 3 + 63644993 aaa i panTro4.chr19 I 8 C 0 s ponAbe2.chr19 56742621 3 + 60714840 aaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60568334 3 + 64156825 aaa i rheMac3.chr19 I 4 C 0 s macFas5.chr19 55694545 3 + 59248254 AAA i macFas5.chr19 I 556 C 0 s papAnu2.chr19 47807295 3 + 51301725 aaa i papAnu2.chr19 I 10 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e chlSab2.chr6 47523591 1 + 50890351 I a score=14847.000000 s hg38.chr19_GL949747v2_alt 554186 10 + 729520 a----aaaaAA------AAA s panTro4.chr19 59829301 10 + 63644993 a----aaaaaa------aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742624 10 + 60714840 a----aaaaaa------aaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60568337 10 + 64156825 a----aaaaaa------aaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55694548 10 + 59248254 A----AAAAAA------AAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47807298 10 + 51301725 a----aaaaaa------aaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47523592 20 + 50890351 ATTTTAAAAAATTTTTTAAA i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45871904 10 + 49145316 a----aaaata------caa i calJac3.chr22 I 487 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e nomLeu3.chr10 103279675 116 - 106955855 I a score=542563.000000 s hg38.chr19_GL949747v2_alt 554196 217 + 729520 AAgctggctgccaggcatggtggcaggcccctgtagtcccagctacttgggagggtgaggcaggagaaacgcttgaacccgggaggcagaggttgcagtgagccaagatcgtgtcactgcactccagcctgggcgacagagagagactccatctc-----------------------------------taaagaaa------------------------------------------------------gaaaaAAA-----------AAAATAGCTGGCTGCTCATCACTGAGTTTCTGGTGTGGTGGCCCCA s panTro4.chr19 59829311 223 + 63644993 aaGCTGGCTgccaggcatggtggcaggcccctgtagtcccagctacttggaagggtgaggcaggagaaatgcttgaatccgggaggcggaggttgcagtgagccgagatcgtgtcactgcactccagcctgggcgacagagagagactccatctc-----------------------------------taaaaaaaagaaaa------------------------------------------------gaaaaaaa-----------aaaaTAGCTGGCTGCTCATCACTGAGTTTCTGGTGTGGTGGCCCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742634 211 + 60714840 aaGCTGGCTgccagacatggtggcaggcccctgtagtcccagctacttgggagggtgaggcaggagaaacgcttgaacccgggaggcggaggttgcagtgagccgagatcgcgtcactgc-------------------agcgagactccatctc-----------------------------------taaaaaaaaacaaagaaaa-----------------------------------------ggaaaaaaaa-----------CAAATAGCTGGCTATTCACCACTGAGTTTCTGGTGTGGTGGCCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103279791 227 - 106955855 AAACTGGCTgccagacatggtggtaggcccctgtagtcccagctacttgggaggctgaggcaggagaaacgcttgaacccaggaggcggaggtttcagtgagccgagattgcgtcactgcactccagcctgggcgacagagcgagactccatctc-----------------------------------taaaaaaagaaagaaaag--------------------------------------------aaaaaaag-----------caaaTAGCTGGCTGCCCATCACTGAGTTTCTGGTGTGGTGGTCCCA i nomLeu3.chr10 I 116 C 0 s rheMac3.chr19 60568347 244 + 64156825 aaGCTGGCTgccaggcatggtggcaggccgctgcagtcccagctacttgggaggctgaggcaggagaaacgcttgaacccaggaggcggagactgcagtgagccaagatcgcatcactgcactccagcct-ggcgtcagagcgagactccgtctc-----------------------------aaaaaaaaaaaaaaaaaagaaaagaaaaGAAAGG--------------------------------AGAAAATATA-----------CAAATAGCTGGCTGCTCATCTCTGAGTTTCTGGTGCGGTGGCCCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55694558 244 + 59248254 AAGCTGGCTgccaggcatggtggcaggccgctgcagtcccagctacttgggaggctgaggcaggagaaatgcttgaacccaggaggcggagactgcagtgagccaagatcgcatcactgcactccagcct-ggcgacagagcgagactccgtctc-----------------------------aaaaaaaaaaaaaaaaaagaaaagaaaaGAAAGG--------------------------------AGAAAATATA-----------CAAATAGCTGGCTGCTCATCTCTGAGTTTCTGGTGCGGTGGCCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47807308 238 + 51301725 aagctggctgccaggcatggtggcaggccgctgcagtcccagctcctcgggaggctgaggcaggagaaacgcgtgaacccaggaggcggagactgcagtgagccaagatcgcgccactgcactccagcct-ggcgacagagcgagattccgtctc-----------------------------------aaaaaaaaacaagaaaagaaaagaaagg--------------------------------agaaaatata-----------caaatagctgGCTGCTCATCTCTGAGTTTCTGGTGCGGTGGCCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47523612 274 + 50890351 AAGCTGGCTgccaggcatggtggcgggccgctgcagttccagctacttgggaggctgaggcaggagacccgcttgaacccgggaggtggaggttgcagtgagccaagatcgcgtctctgcacttcagcttgggtgacagagcgagactccttctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaagaaaagaaaagaaagg--------------------------------agaaaatata-----------caaaTAGCTGGCTGCCCATCTCTGAGTTTCTGGTGCGGTGGCCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45871914 279 + 49145316 aatttagtt---aggcgtggtggcaggcacctgtcgtcccagccactcaggaggctgaggcaggagaaacacttgaacccggcaggcggaggttgcactgagctgagatcacgccactgcactccagcctgagcaacagagtgagatgccatctc-----------------------------------TCAAACAGATAAATACATTTAAAAATGGCTTAGATGGTAAATCTTCTAAAATAATTTGACCAAAATAATAATAATTTTTCTAAAACAGCTGGCTGCTCATCACTGAGTTTCTGGTGCGGGGACCCCG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I a score=1356635.000000 s hg38.chr19_GL949747v2_alt 554413 381 + 729520 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGATCTCGGGAGAGAAGGTGACCTTCTACTGCCGTCTAGACACTGCAACAAGCATGTTCTTACTGCTCAAGGAGGGAAGATCCAGCCACGTACAGCGCGGATACGGGAAGGTCCAGGCGGAGTTCCCCCTGGGCCCTGTGACCACAGCCCACCGAGGGACATACCGATGTTTTGGCTCCTATAACAACCATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACACCCTTCGCCGC--CA---TGTCCTACCTGGAGCCCTGAGGGATCCCCAGAGAGTGAT-GGGGAGGGTGTC---------- s panTro4.chr19 59829534 381 + 63644993 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGATCTCGGGAGAGAAGGTGACCTTCTACTGCCGTCTAGACACTGCAACAAGCATGTTCTTACTGCTCAAGGAGGGAAGATCCAGCCACGTACAGCGCGGATATGGGAAGGTCCAGGCGGAGTTCCCCCTGGGCCCTGTGACCACAGCCCACAGAGGGACATACCGATGTTTTGGCTCCTATAACAACCATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACACCCTTCGCCGC--CA---TGTCCTACCTGGAGCCCTGAGGGATCCCCAGAGAGTGAT-GGGGAGGGTGTC---------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742845 383 + 60714840 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGATCTCGGGAGAGAAGGTGACCTTCTACTGCCGTCTAGACACTGCAACAAGCATGTTCTTACTGCTCAAGGAGGGAAGATCCAGCCGCGTACAGCGCAGATACGGGAAGGTCCAGGCGGAGTTCCCCCTGGGCCCTGTGACCACAGCCCACAGAGGGACATACCGATGTTTTGGCTCCTATAACAACCATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAGATGCTCAATTCCCCCCGCCCCCCCCCGCCACA---CATCCTACCTGGAGCCCT-AAGGATCCCCAGAGAGTGATGGGGGAGGGTGTC---------- i ponAbe2.chr19 C 0 I 1366 s nomLeu3.chr10 103280018 381 - 106955855 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGATCTCGGGAGAGAAGGTGACCTTCTACTGCCGTCTAGACACTGCAACAAGCATGTTCTTACTGCTCAAGGAGGAAAGATCCACCCACGTACAGCGCGGATACGGGAAGGTCCAGGCGGAGTTCCCCCTGGGCCCTGTGACCACAGCCCACAGAGGGACATACCGATGTTTTGGCTCCTATAACAAGCATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACACCCCCCACCGC--CA---TGTCCTACCTGGAGCCCTAAGGGATCCCCAGAGAGTGAT-GGGGAGGGTGTC---------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60568591 381 + 64156825 CCTTCTCTCATAGAAATGTATGACACACCCACGCTCTCGGTTCATCCTGGACCCGAAGTGACCTCGGGTGAGAAGGTGACCTTCTACTGCCGTCTAGACACAGCAACAAGCATGTTCTTACTGCTCAAGGAGGGAAGATCCAGAGACGTGCAGCGCAGCTACGGGAAGGTCCAGGCGGAGTTCCCCGTGGGCCCTGTGACCACAGCCCACAGAGGGTCATACCGATGTTTTGGCTCCTATAACAACTATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACAGCCCCCGCCGC--CG---TGTCCTACCCGGAGCCCTAAGGGATGCCCAGAGAGTGAC-AGGGAGGGTGTC---------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55694802 381 + 59248254 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGACCTCGGGTGAGAAGGTGACCTTCTACTGCCGTCTAGACACAGCAACAAGCATGTTCTTACTGCTCAAGGAGGGAAGATCCAGAGACGTGCAGCGCAGCTACGGGAAGGTCCAGGCGGAGTTCCCCATGGGCCCTGTGACCACAGCCCACAGAGGGTCATACCGATGTTTTGGCTCCTATAACAACTATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACAGCCCCCGCCGC--CG---TGTCCTACCCGGAGCCCTAAGGGATGCCCAGAGAGTGAC-GGGGAGGGTGTC---------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47807546 381 + 51301725 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGACCTCGGGTGAGAAGGTGACCTTCTACTGCCGTCTAGACACAGCAACAAGCATGTTCTTACTGCTCAAGGAGGGAAGATCCAGAGACGTGCAGCGCAGCTACGGGAAGGTCCAGGCAGAGTTCCCCATGGGCCCGGTGACCACAGCCCACAGAGGGTCATACCGATGTTTTGGCTCCTATAACAACTATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACAGCCCCCGCCGC--CA---TGTCCTACCCGGAGCCCTAAGGGATGCCCAGAGAGTGAT-GGGGAGGGTGTC---------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47523886 384 + 50890351 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGACCTCGGGTGAGAAGGTGACCTTCTACTGCCGTCTAGACACAGCAACAAGCATGTTCCTACTGCTCAAGGAGGGAAGATCCAGAGACGTGCAGCGCAGCTATGGGAAGGTCCAGGCGGAGTTCCCCATGGGCCCTGTGACCACAGCCCACAGAGGGACATACCGATGTTTTGGCTCCTATAACAACTATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACAGCCCCCGCCGC--CGCCATGTCCTACCCGGAGCCCTAAGGGATGCCCAGAGAGTGAT-GGGGAGGGTGTC---------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872193 377 + 49145316 CCTTCTCTCGTAGGAATGTATGACACGCCCACCCTCTCAGTTCATCCCAGACCGGAAGTGATCTCGGGCGAGAAGGTGACCTTCCATTGCCGTCTGGGGACTGCAACAAGCACCTTCTTTCTGCTCAAGGAGGGAAGATCCAG---CGTACGGCGCGGATACGGGAAGGTCCAGGCCGAATTCCCCTTGGGCTCTGTGACCACATCCCACAGAGGGACATACCGATGTTTTGGCTCCTACAACAACCATGCGTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAGA-GCCCCGGTTCCCACACCTCCCGCTGC--CA---TGTCGTACCTGGAGCCCTAAGGGATCTCCAGATCGTGAT-GGGGAGGGTATC---------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19990709 380 - 122678785 CCTTCTCCCACAGGAATGTATGATACGCCCACTCTCTCCGTTCATCCCGGGAATAAGGTGATTTCGGGAAAGAACGTGACCTTCTCTTGCCGTCTAGACACTGCAACAAACAAGTTCTTTCTGCTCAAGGAGGGACGATCCAGCCACCCACAACACAGATATGGGAACATCCAGGTGGAGTTTCCCATAGGCCCTGTGACCACAGCCCACAGAGGGACGTACAGATGTTTTGGATCTTATAACAACCATGCGTGGTCTTTCCCCAGTAAGCCTGTGAAACTCCTGGTCACAGGTGAGGAAACTCCCAGATTTCCCC-----------T--CA---TGTCCCCTCTGGAACCCCAAGTAAACCCTGACCAGTGAT-GAGGAAGGGACAGGTGGGAAAC i canFam3.chr1 I 1526 C 0 a score=171318.000000 s hg38.chr19_GL949747v2_alt 554794 80 + 729520 CAAGGG---------------------------ACGTCCACTTCCTGGGTGCCTGGTTGGTCATG--TGAGGAAGAACACCAGAAG--CAGGAAGGAGGAGGGAGCAGAGA s panTro4.chr19 59829915 80 + 63644993 CAAGGG---------------------------TCATCCACTTCCTGGGTGCCTGGTTGGTCATG--TGAGGAAGAACACCAGAAG--CAGGAAGGAGGAGGGAGCAGAGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280399 80 - 106955855 CAAGGG---------------------------ACGTCCACTTCCTGGGGATCCAGTTGGTCATG--TGAGGAAGAACACCAGAAG--CAGGAAGGAGGAGGGAGAAGAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60568972 80 + 64156825 CAAGGG---------------------------ACGTCCACTTCCTGGGAGCCCAGTTGGTCATG--TGAGGAAGAACACCAGAAG--CAGGAAGGAGGAGGGAGCAGAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695183 80 + 59248254 CAAGGG---------------------------ACGTCCACTTCCTGGGAGCCCAGTTGGTCATG--TGACGAAGAACACCAGAAG--CAGGAAGGAGGAGGGAGCAGAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47807927 56 + 51301725 CAAGGG---------------------------ACGTCCACTTCCCGGGAGCCCAGT--------------------------aag--caggaaggaggagggagcagaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524270 80 + 50890351 CAAGGG---------------------------ACGTCCACTTCCCGGGAGCCCAGTTGGTCATG--TGAGGAAGAACACCAGAAG--CAGGAAGGAGGAGGGAGCAGAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872570 80 + 49145316 AAAGGG---------------------------ACGTTGGCTTCCTGGGGGCCCAGGTGGTGGTG--TGAGGAAGATCACCAGAAA--CAGGAAGGAAGAAGGTGCAGAGA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19991089 111 - 122678785 CACGGAGAGCATCTCGCTCCAGCACCCTCATCCACATGCATTTTGTGGAGGCCCATTTGATTGTTCCTGAGGAAGAAGGCCAGAGGGACAAGAAGAGGGAGGGCCCAGAGA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56743228 1366 + 60714840 I a score=25571.000000 s hg38.chr19_GL949747v2_alt 554874 10 + 729520 AAGGAATGGT s panTro4.chr19 59829995 10 + 63644993 AAGGAATGGT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280479 10 - 106955855 AAGGAATGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60569052 10 + 64156825 AAGGAATGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695263 10 + 59248254 AAGGAATGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47807983 10 + 51301725 aaggaatggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524350 10 + 50890351 AAGGAATGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872650 10 + 49145316 AAGAAATGGT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19991200 0 - 122678785 C e ponAbe2.chr19 56743228 1366 + 60714840 I a score=250356.000000 s hg38.chr19_GL949747v2_alt 554884 132 + 729520 Aaggcgggtggatcacaaggtcaggagttcgagaccagcctggccaagacggtgaaaccccgtctctactaaaaatacagaaattagccagacgcagtggcggacacctgtagtcccagctactcaggaggc s panTro4.chr19 59830005 132 + 63644993 Aaggcgggtggatcacaaggtcaggagttcgagaccagcctggccaagacggtgaaaccccgtctctactaaaaatacaaaaattagccagacgcagtggcggacacctgtagtcccagctactcaggaggc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280489 132 - 106955855 Aaggcaggtggatcatgaggtcaggagttcgagaccagcctggccaagacagtgaaaccccatctctactaaaaatacaaaaattagccagacgcagtggtggacacctatagtcccagctactcaggaggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60569062 132 + 64156825 Aaggcgggtggatcacgaggtcaggagttcgagaccagcctggccaagacagtgaaaccctgtctctactaaaaatacaaaaattaaccagacggagtggcggacacctgtagtcccagctactcaggaggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695273 132 + 59248254 Aaggcgggtggatcacgaggtcaggagttcgagaccagcctggccaagacggtgaaaccctgtctctactaaaaatacaaaaattaaccagacggagtggcggacacctgtagtcccagctactcaggaggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47807993 132 + 51301725 aaggcgggcggatcacgaggtcaggagttcgagaccagcctggccaagacggtgaaaccctgtctctactaaaaatacaaaaattaaccagacggagtggcggacacctgtagtcccagctactcaggaggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524360 132 + 50890351 Aaggcgggcggatcacgaggtcaggaggtcgagaccagcctggccaagacggtgaaaccctgtctctactaaaaatacaaaaattaaccagacggagtggcggacacctgtagtcccagctactcaggaggc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19991200 0 - 122678785 C e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45872660 0 + 49145316 C a score=24444.000000 s hg38.chr19_GL949747v2_alt 555016 9 + 729520 tgaggcagg s panTro4.chr19 59830137 9 + 63644993 tgaggcagg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280621 9 - 106955855 tgaggcagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60569194 9 + 64156825 tgaggcagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695405 9 + 59248254 tgaggcagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808125 9 + 51301725 tgaggcagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524492 9 + 50890351 tgaggcagg i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19991200 9 - 122678785 TGAGGCAGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45872660 0 + 49145316 C a score=190776.000000 s hg38.chr19_GL949747v2_alt 555025 121 + 729520 agaatcgcttgaacccgggaggcgggggttgtagtgaaccgagatcataccaccgcactgcaacctgggcgacagagcaagactccatctcaaaaaaaaaaaaaaaaaaaaaaa-gaaTGGC s panTro4.chr19 59830146 116 + 63644993 agaatcgcttgaacccgggaggcgggggttgtagtgaaccgagatcataccaccgcactgcaacctgggcgacagagcaagactccatctc-----aaaaaaaaaaaaaaaaaa-gaaTGGC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280630 120 - 106955855 agaatcgcttgaacctggcaggtggaggttgcagtaagccgagatcgtgccactgcactccagcctgggtgacagagaaagactccatctc-aaaaaaaaaaaaaaaaaaaaaa-gaaTGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60569203 121 + 64156825 agaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcataccactgcactgcaacctgggcaacacagcaagattccatctc-caaaaaaaagaaaaaaaaaaaaTGAATGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695414 116 + 59248254 agaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcataccactgcactgcaacctgggcaacacagcaagattccatctc-aaaaaaaaaaaaaaaaaa-----gaaTGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808134 120 + 51301725 agaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcataccactgcactgcaacctgggcgacacagcaagattccatctc-aaaaaaaaaaaaaaaaaaaaaa-gaatggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524501 112 + 50890351 agaatcgcttgaacccaggaggtagaggttgcagtgagccgagatcataccactgcactacaacctgggcaacacagcaagattccatcta-caaaaaaaaaaaaa---------gaaTGGC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19991209 0 - 122678785 C e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45872660 0 + 49145316 C a score=505024.000000 s hg38.chr19_GL949747v2_alt 555146 186 + 729520 AAGACCGGAGGAAACCAAAAACCCTTACTTTTTTTTCTTTATCTCCTTTTCCAGGCGACATTGAGAACACCAGCCTTGCACCTGAAGACCCCA---CCTTTCCTGGTGAGTAACTGGTCCTTCTAAGCTCAGACGAGCGATCAGAGCCTCCCAGTGACACTAAAAACGTGGCATTCATTCAAAATATtc s panTro4.chr19 59830262 186 + 63644993 AAGACCGGAGGAAACCCAAAACCCTTACTTTTTTTTCTTTATCTCCTTTTCCAGGCGACATTGAGAACACCAGCCTTGCACCTGAAGACCCCA---CCTTTCCTGGTGAGTAACTGGTCCTTCTAAGCTCAGACGAGCGATCAGAGCCTCCCAGTGACACTAAAAACGTGGCATTCATTCAAAATATTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280750 185 - 106955855 AAGACTAGAGGAAACCCAAAACCCTTAC-TTTTTTTCTTTATCTCCTTTTCCAGGTGACATTGAGAACACCAGCCTTGCACCTGAAGACCCCA---CCTTTCCTGGTGAGTAACTGCTCCTTCTAAGCTCAGAGGAGAGATCAGAGCCTCCCAATGATACTAAAAACGTGGCATTCATTCAAAATATTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60569324 185 + 64156825 AAGACTGGAGGAAACCCAAAATCCTTAC-TTTTTTTCTTTATCTCCTTTTCCAGGCGACACTGAGAACACCAGCCTTGCACCTACAGACCCCA---CCTTTCCCAGTGAGTAACTAGTCCTTCTAAGCTCAGAGGAGAGATCAGAGCCTCCCAGGGACACTAAAAACATGGCATTCATTCAAAATATTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695530 186 + 59248254 AAGACTGGAGGAAACCCAAAATCCTTACTTTTTTTTCTTTATCTCCTTTTCCAGGCGACATTGAGAACACCAGCCTTGCACCTACAGACCCCA---CCTTTCCCGGTGAGTAACTAGTCCTTCTAAGCTCAGAGGAGAGATCAGAGCCTCCCAGGGACACTAAAAACATGGCATTCATTCAAAATATTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808254 185 + 51301725 aagaCTGGAGGAAACCCAAAatccttac-tttttttctttatctccttttcCAGGCGACATTGAGAACACCAGCCTTGCACCTACAGACCCCA---CCTTTCCCGGTGAGTAACTAGTCCTTCTAAGCGCAGAGGAGAGATCAGAGCCTCCCAGGGACACTAAAAACATGGCATTCATTCAAAATATtc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524613 185 + 50890351 AAGACTGGAGGAAACCCAAAATCCTTAC-TTTTTTTCTTTATCTCCTTTTCCAGACGACATTGAGAACACCAGCCTTGCACCTACAGACCCCA---CCTTTCCCGGTGAGTAACTAGTCCTTCTAAGCTCAGAGGAGAGATCAGAGCCTCCCAGGGACACTAAAAACATGGCATTCATTCAAAATATTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872660 185 + 49145316 CAGACCAGGGGAAACTCAAAAGCCTTCC-TTACGTTCTTCATCTCCTTTTCCAGGTGACACAGAGAATACCAGCCTGGCACCTACAGACCCCA---CCTCTCCTGGTGAGTAACTGGTCCTTCTAAGCTCAGAGGAGGAATCAGAGGCTCCCAATGACACTAAAAACGGGGCATTCATTCAAAATATTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19991209 186 - 122678785 AAGACCGGAGGAAACCCAAAACCCTCA--TGGTTTTCTTTGTTTCCACTGCCAGAAGGTGTTGGGGACACCAGCCTTGTACCCACAGAACATACATCTTTTTCTGGTGAGTAACAGGTATTTCTAAGCCTGGGGAAGGGAGCAAAGCCTCCCAGTG-CATTAAAAACATGGCATTTGTTCAAAATATCC i canFam3.chr1 C 0 I 703 e ponAbe2.chr19 56743228 1366 + 60714840 I a score=79478.000000 s hg38.chr19_GL949747v2_alt 555332 37 + 729520 atcgaggccaggcgtggtggctcacgcctgtaatccc s panTro4.chr19 59830448 37 + 63644993 ATCGAggccaggcgtggtggctcacgcctgtaatccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280935 36 - 106955855 GTCGAGGCTGGGCGCGGTGGCTCA-GCTTGTAATCCC i nomLeu3.chr10 C 0 I 807 s rheMac3.chr19 60569509 37 + 64156825 ATCGAggccaggagcagtggctcacgcctgtaatccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695716 37 + 59248254 ATCGAggccaggagcagtggctcacgcctgtaatccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808439 37 + 51301725 attgaggccgggcgcggtggctcacgcctgtaatccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524798 37 + 50890351 ATCGAggccaggcgcggtggctcacgcctgtaatccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872845 37 + 49145316 ATCAAggctgagcatggtggctcactcctataatccc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I a score=29718.000000 s hg38.chr19_GL949747v2_alt 555369 16 + 729520 agcactttgggaggcc s panTro4.chr19 59830485 16 + 63644993 agcactttgggaggcc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60569546 16 + 64156825 agcactttgggaggcc i rheMac3.chr19 C 0 I 735 s macFas5.chr19 55695753 16 + 59248254 agcactttgggaggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808476 16 + 51301725 agcactttgggaggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524835 16 + 50890351 aacactttgggaggcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872882 16 + 49145316 agcacgctgggaggcc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e nomLeu3.chr10 103280971 807 - 106955855 I a score=165696.000000 s hg38.chr19_GL949747v2_alt 555385 151 + 729520 gagat-ggtgcatcatttgaggtcaggagtttgagaccagcctggccaacatggcgaaaccctgtctctactaaaaatacaAAACTTAg---gctgggcatcatggctcacacctgtaatcccaacacttcgggaggccaaggtggttggatcac s panTro4.chr19 59830501 151 + 63644993 gagat-ggtgcatcacttgaggtcaggagtttgagaccagcctggccaacatggcgaaaccctgtctctactaaaaatacaaaacttag---gctgggcatcatgactcacacctgtaatcccaacacttcgggaggccaaggtggttggatcac i panTro4.chr19 C 0 C 0 s macFas5.chr19 55695769 151 + 59248254 aggat-ggtgcatcacttgaggtcaggagttcaagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattag---gctgagcactatggctcactcctgtaatcccagcactttgggaggctgaggcaggcagatcac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808492 151 + 51301725 aggat-ggtgcatcacttgaggtcaggagttcaagaccagcccggccaacatggcgaaaccccatctctactaaaaatacaaaaattag---gctgagcaccatggctcagtcctgtaatcccagcactttgggaggctgaggcaggcagatcac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524851 151 + 50890351 gggat-ggtgcatcacttgaggtcaggagttcaagaccagcctggccagcatggcaaaaacccatctctactaaaaatacaaaaattag---gctgggcaccatggctcactcctgtaatcccagcactttgggaggctgaggcaggcagatcac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872898 151 + 49145316 gagatgggtgcatcacttgaggtcaggagttcgagaccagcctggccaacatagtgaaaacctgtctctactaaaaatacaaaaattagtcagctgtg-gtaatgg---acacctgtaatccgagctactctggaggctgaggcaggagaatcgc i calJac3.chr22 C 0 I 598 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e nomLeu3.chr10 103280971 807 - 106955855 I e rheMac3.chr19 60569562 735 + 64156825 I a score=159239.000000 s hg38.chr19_GL949747v2_alt 555536 186 + 729520 aaggtcaggaattcgagaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcctggtggtgctcgcctgtaatcccagctactcaggaggctgaggcaggagaattg-ttgaacctgggatgcagaggttgcagtgagctgagatcgcgccactgcattcca s panTro4.chr19 59830652 186 + 63644993 aaggtcaggaattcaagaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcctggtggtgctcgcctgtaatcccagctactcaggaggctgaggcaggagaattg-ttgaacctgggatgcggaggttgcagtgagctgagatcgcgccactgcattcca i panTro4.chr19 C 0 C 0 s macFas5.chr19 55695920 187 + 59248254 aaggtcaggaattcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcatggtggtactcacctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaaccagggaggcggaggttgcagtgagctgagattgcaccattgcactcca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808643 187 + 51301725 aaggtcaggaatttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcatggtggtactcacctgtaatcccagctacttgggaggctgaggcaggagaatggcttgaaccagggaggcagaggttgcagtgagctgagatcacgccactgcactcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47525002 187 + 50890351 aaggtcaggaattcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggtactcacctgtaatcccagctacttaggaggctgaggcagaagaatcgtttgaaccagggaggcagaggttgcagtgagctgagattgcgccattgcactcca i chlSab2.chr6 C 0 I 817 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e rheMac3.chr19 60569562 735 + 64156825 I a score=15465.000000 s hg38.chr19_GL949747v2_alt 555722 51 + 729520 ctccactgcacgacacagcgagactccatctcacagaaaaacaaaaacaaa s panTro4.chr19 59830838 51 + 63644993 ctccactgcacgacacagcgagactccatctcacagaaaaacaaaaacaaa i panTro4.chr19 C 0 C 0 s macFas5.chr19 55696107 48 + 59248254 ---gcctgggcaatagagacagattctgtctcaaaaaaaaaaaaaaagaaa i macFas5.chr19 C 0 I 280 s papAnu2.chr19 47808830 48 + 51301725 ---gcctgggtgacagagcgagactccatctcacaaaaaaaacaaaagcaa i papAnu2.chr19 C 0 I 1 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e chlSab2.chr6 47525189 817 + 50890351 I e rheMac3.chr19 60569562 735 + 64156825 I a score=573.000000 s hg38.chr19_GL949747v2_alt 555773 2 + 729520 aC s panTro4.chr19 59830889 2 + 63644993 aC i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47808879 2 + 51301725 ac i papAnu2.chr19 I 1 I 162 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e chlSab2.chr6 47525189 817 + 50890351 I e macFas5.chr19 55696155 280 + 59248254 I e rheMac3.chr19 60569562 735 + 64156825 I a score=72299.000000 s hg38.chr19_GL949747v2_alt 555775 305 + 729520 Tat--tatatata----tatattcatcaagtgcatagtatacacagtgaactacactgtaacagtcagccaggcagatatcttgactctgcagcacttagattctagcaggaggagacacaccatcggtcaacgtcaggatagcacacaggagggaatgatgctatggaaggaaaagacaaagtagaacagacttacagtgattgaaatggcagctagcaatattaaataggtttgtccagatggacctcacagagaaagaaggcatctgagcaaatgcgttcagacttgagttaatcatgtggctgtcag s panTro4.chr19 59830891 306 + 63644993 TATTATATATata----tatattcatcaagtgcatagtatacacagtgaactacactgtaacagtcagccaggcaaatatcttgacggtgcagcacttagattctagcaggaggagacacaccatcggtcaacgtcaggatagcacataggagggaatgatgctatggaaggaaaagacaaagtagaacagacttacagtgattgaaatggcagctagcaatattaaataggtttgtccagatggacctcacagag-aagaaggcatctgagcaaatgcgttcagactggagttaatcatgtggctgtcag i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47809043 307 + 51301725 tattatatatataattttatatatatatagtgcatagtatataCGGTGAACTACACTGTAACAGTCAGCCAGGCAACTATCTTGACTCTGTGGCACTTAGATTCTAGCAGAAGGAGACAGACCATGGATCAATGTCAGGATAGCACATAGGAGGAAATGATGCTATGGAAGGAAAAGACGAAGTAGAACAGACTTACAGGGACTGAAATGGCAGGTAGCAGTATTAAATAGGGTTGTCCAGATGGACCTCACAGAG----AAGGCATCTGAACAAATGCGTTCAGACTTGAGTTAGTCACGTGGCTCGCAG i papAnu2.chr19 I 162 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e chlSab2.chr6 47525189 817 + 50890351 I e macFas5.chr19 55696155 280 + 59248254 I e rheMac3.chr19 60569562 735 + 64156825 I a score=28646.000000 s hg38.chr19_GL949747v2_alt 556080 61 + 729520 gagaaaggaggctctggagagaatgaaatggcatctgcctgtgccctggggcaggaagata s panTro4.chr19 59831197 61 + 63644993 gagaaaggaggctctggacagaatgaaatggcatctgcctgtgccctggggcaggaagata i panTro4.chr19 C 0 C 0 s macFas5.chr19 55696435 60 + 59248254 gagaaaggaggctccagagagag-gaaatggcctctgcctgtgccctggggcaggacgatg i macFas5.chr19 I 280 C 0 s papAnu2.chr19 47809350 60 + 51301725 GAGAAAGGAGGCTCCAGAGAGAG-GAAATGGCCTCTGCCTGTGCCCTGGGGCAGGACGATG i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e chlSab2.chr6 47525189 817 + 50890351 I e rheMac3.chr19 60569562 735 + 64156825 I a score=61697.000000 s hg38.chr19_GL949747v2_alt 556141 69 + 729520 actggggtaatacaataataactatgaggccaggagGGTTGAAAATGATGTTTGGAAGATGACGGTGGG s panTro4.chr19 59831258 69 + 63644993 actggggtaatacaataataactatgaggccaggagggttgaaAATTATGTTTGGAAGATGACGGTGGG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60570297 69 + 64156825 ACTGGGGTAATAAAATAATAACTATGAGGCCAGGAGGGTTGAAAATGATGTTTGGAAAATGACAGTGGG i rheMac3.chr19 I 735 I 317 s macFas5.chr19 55696495 69 + 59248254 actggggtaataaaataataactatgaggccaggagggttgaaAATGATGTTTGGAAAATGACAGTGGG i macFas5.chr19 C 0 I 6 s papAnu2.chr19 47809410 69 + 51301725 ACTggggtaataaaataataactatgaGGCCAGGAGGGTTGAAAATGATGTTTGGAAAATGACAGTGGG i papAnu2.chr19 C 0 I 6 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e chlSab2.chr6 47525189 817 + 50890351 I a score=11223.000000 s hg38.chr19_GL949747v2_alt 556210 25 + 729520 ATGGGCCTGGGGC-GCACGGCTAGGA s panTro4.chr19 59831327 25 + 63644993 ATGGGGCTGGGGC-GCACGGTTAGGA i panTro4.chr19 C 0 C 0 s macFas5.chr19 55696570 26 + 59248254 ATGGGGCTGGGGCTGCACGGTTAGGA i macFas5.chr19 I 6 I 6 s papAnu2.chr19 47809485 26 + 51301725 atggggctggggctgcACCGTTAGGA i papAnu2.chr19 I 6 I 5 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e chlSab2.chr6 47525189 817 + 50890351 I e rheMac3.chr19 60570366 317 + 64156825 I a score=25983.000000 s hg38.chr19_GL949747v2_alt 556235 322 + 729520 TT-------ACAGGAGTGAggcccggcgcggtggctcacgcctgtaatcccagcactttgggaaaccgaggcaggtgggtcatgaggtcaggagatcaagaccatcctggctaacacggtgaaaccctgtctctact-aaaaaaaaatacaaaaattatccgggcgtggtggcgggcgcctgtagtcccagctacacaagaggctgaggcaggagaatggcgtgaacccgggagacggagcttgcagtgagctgagatcgcgccactgcactccagcctgagcgacagagtgagactccgtctcaaaaaaaaaaaaaaagaaaaagaaaa s panTro4.chr19 59831352 323 + 63644993 TGCTGAAAAAAAACAGTGAggcagggcatggtggctcacgcctgtaatcccagcactttgggaagccgaggcgggtggatcatgaggtcaggagatcaagaccatcctggctaacacagtgaaaccctgtctctactaaaaaaaaaatacaaaaattatccgggcgtggtggtgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggagacggagcttgcagtgagctgagatcgcgccactgcactccagcctgggcgacagagtgagactccgtctcaaaaaaaaa-------aaaaagaaaa i panTro4.chr19 C 0 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e chlSab2.chr6 47525189 817 + 50890351 I e papAnu2.chr19 47809511 5 + 51301725 I e macFas5.chr19 55696596 6 + 59248254 I e rheMac3.chr19 60570366 317 + 64156825 I a score=311.000000 s hg38.chr19_GL949747v2_alt 556557 2 + 729520 ag s panTro4.chr19 59831675 2 + 63644993 ag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103281778 2 - 106955855 AA i nomLeu3.chr10 I 807 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e chlSab2.chr6 47525189 817 + 50890351 I e papAnu2.chr19 47809511 5 + 51301725 I e macFas5.chr19 55696596 6 + 59248254 I e rheMac3.chr19 60570366 317 + 64156825 I a score=546.000000 s hg38.chr19_GL949747v2_alt 556559 1 + 729520 a s panTro4.chr19 59831677 1 + 63644993 a i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103281780 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55696602 1 + 59248254 A i macFas5.chr19 I 6 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e chlSab2.chr6 47525189 817 + 50890351 I e papAnu2.chr19 47809511 5 + 51301725 I e rheMac3.chr19 60570366 317 + 64156825 I a score=910.000000 s hg38.chr19_GL949747v2_alt 556560 1 + 729520 a s panTro4.chr19 59831678 1 + 63644993 a i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103281781 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55696603 1 + 59248254 A i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47809516 1 + 51301725 a i papAnu2.chr19 I 5 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e chlSab2.chr6 47525189 817 + 50890351 I e rheMac3.chr19 60570366 317 + 64156825 I a score=31170.000000 s hg38.chr19_GL949747v2_alt 556561 36 + 729520 AAAAAAATAGTGAGACTTTGAATTTCACTATGTGTG s panTro4.chr19 59831679 28 + 63644993 aaaaaaaTAGTGAGACTTTGGATTTCAC-------- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103281782 36 - 106955855 AAAAAAATAGTGAGACTTTGAATTTGACTATGTGTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55696604 28 + 59248254 AAAAAAATAGTGAGACTTTGAATTTGAC-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47809517 28 + 51301725 aaaaaaatagtgagaCTTTGAATTTGAC-------- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45873647 28 + 49145316 AGAAAAACAGTGAGACTTTGAATTTGAC-------- i calJac3.chr22 I 598 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e chlSab2.chr6 47525189 817 + 50890351 I e rheMac3.chr19 60570366 317 + 64156825 I a score=3128.000000 s hg38.chr19_GL949747v2_alt 556597 3 + 729520 TAT s panTro4.chr19 59831707 3 + 63644993 TAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56744594 3 + 60714840 TAT i ponAbe2.chr19 I 1366 C 0 s macFas5.chr19 55696632 3 + 59248254 TAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47809545 3 + 51301725 TAC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45873675 3 + 49145316 TAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19991395 703 - 122678785 I e nomLeu3.chr10 103281818 0 - 106955855 C e chlSab2.chr6 47525189 817 + 50890351 I e rheMac3.chr19 60570366 317 + 64156825 I a score=145450.000000 s hg38.chr19_GL949747v2_alt 556600 78 + 729520 GTGTGAGGAGAAAGAGGTAATGATGACTTAATGAGGAAAATGAGGCTTAAATAGAAG---ACGggctgggccgggtggctc s panTro4.chr19 59831710 78 + 63644993 GTGTGAGGAGAAAGAGGTAATGATGACTTAATGAGGAAAATGAGGCTTAAATAGAAG---ACCggctgggccgggtggctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56744597 81 + 60714840 GTGTGAGGAGAAAGAGGTAATGATGACTTAACGAGGAAAATGAGGCTTAAATAGAAGGACAGGggctgggctgggtggctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103281818 73 - 106955855 -----AGGAGAAGGACCTAATGATGACTGAATGAGGAAAATGAGGCTTAAATAGAAG---ACGggctgggccgggtggctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55696635 80 + 59248254 CTGTGAGGGGAAAGAGGTAATGATGACTTAATGAGGAAAATGAGGCTTACACAGAAG-ACAGGggctgggccgtgtggttc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47809548 80 + 51301725 ATGTGAGGGGAAAGAGGTAATGATGActtaatgaggaaaatgaggcttacACAGAAG-ACAGGGGCTGGGCCGTGTGATTc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47526006 77 + 50890351 GTGTGAGGGGAAAGAGGTAATGATGACTTAATGAGGAAAATGAGGCTTACACAGAAG-ACAGGGGCTG---CGTgtggttc i chlSab2.chr6 I 817 C 0 s calJac3.chr22 45873678 76 + 49145316 GTGTGAGGAGA--GGAGTGATGCT--CTTAATGAGGAAAATGAGGCTTAGGTAGAAG-ACCTGggctgggcgtggtggctc i calJac3.chr22 C 0 I 3 e canFam3.chr1 19991395 703 - 122678785 I e rheMac3.chr19 60570366 317 + 64156825 I a score=107764.000000 s hg38.chr19_GL949747v2_alt 556678 62 + 729520 ccgcatgtaatcccagcactttggaaggcaggggcggctggatcacttgaggtcaggagttc s panTro4.chr19 59831788 62 + 63644993 ccgcatgtaatcccagcactttggaaggcaggggcggctggatcacttgaggtcaggagttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56744678 62 + 60714840 gcgcatgcgatctcagcactttggaaggcagaggcaggtggatcacttgaggtcaggagttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103281891 62 - 106955855 ccgcatgtaatcccagcacttcggaaggcaggggcaggtggatcacttgagatcaggagttc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55696715 62 + 59248254 ccgcgtgtaatcccagcactttggaaggcagaggtgggtggatcacttgagatcaggagatc i macFas5.chr19 C 0 I 312 s papAnu2.chr19 47809628 62 + 51301725 ccgcgtgtaatcccagcactttggaaggcagaggcgggcggatcacttgaggtcaggagatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47526083 62 + 50890351 ccgcgtgtaatcccagcacttaggaaggcagaggcgggtggatcacttgaggtcaggagatc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19991395 703 - 122678785 I e calJac3.chr22 45873754 3 + 49145316 I e rheMac3.chr19 60570366 317 + 64156825 I a score=406279.000000 s hg38.chr19_GL949747v2_alt 556740 181 + 729520 aagaccagcctggccaacacagtgaaaccccatctctactaaaaatacaaacatgagttgggtgtggtggcgcacgccagtaattacagctactcggggctgaagcaagaggattgcttgaactcgggaggcggaggttgcagtgagctgagatcacaccactgtactccagcctcagagg s panTro4.chr19 59831850 181 + 63644993 aagaccagcctggccaacacagtgaaaccccatctctactaaaaatacaaacattagttgggtgtggtggcgcatgccagtaattacagctactgggggctgaagcaagaggattgcttgaactcgggaggcggaggttgcagtgagctgagatcacaccactgtactccagcctcggAGg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56744740 181 + 60714840 gagaccagcctggccaacacagtgaaaccctgtctctactaaaaatacaaacattagctgggcgtggtggtgcacgcctgtaattacaggtactcggggctgaagcaagaggattgcttgaacttgggaggcggaggttgcagtgagctgagatcacaccactgcactccagcctcggAGg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103281953 181 - 106955855 gagaccagcctggccaacacagtgaaaccccgtctctactaaaaatacaaacattagctgggcgtggtggcgcacgcccataattacagctactcggggctgaagcaagaggattgcttgaactcgggaggcggaggttgcagtgagctgagatcacaccactgcactccaacctcggAGg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60570683 179 + 64156825 Aagaccagcctggccaacacagtgaaaccccatctctactaaacatacaaacattaggtaggcatggtggcacatgct-gtaattacagctactcggggctgaggcaagaggatcgctt-aattcgggaggctgaggttgcagtgagctgagatcgcaccactgcgctccagcctggAAGg i rheMac3.chr19 I 317 C 0 s macFas5.chr19 55697089 179 + 59248254 aagaccagcctggccaacgtggtgaaaccccatctctactaaacatacaaacattaggtaggcatggtggcacatgct-gtaattacagctactcggggctgaggcaagaggatcgctt-aattcgggaggctgaggttgcagtgagctgagatcgcaccactgcgctccagcctggAAGg i macFas5.chr19 I 312 C 0 s papAnu2.chr19 47809690 179 + 51301725 gagaccagcctggccaacacagtgaaaccccatctctactaaacatacaaacattaggtgggcgtggtggcacacgct-gtaattacagctacccagggctgaggcaagaggatcgctt-aactcgggaggctaaggttgcagtgagctgagatcgcaccactgcgctccagcctggaagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47526145 180 + 50890351 gagaccagcctggccaacacagtgaaaccccatctctactaaacatacaaacattaggtgggcgtggtggcacacgct-gtaattacagctactcggggctgaggcaagaggatcgcttaaactcggcaggctgaggttgcagcaagctgagatcgcaccactgcgctccggcctggAAGg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19991395 703 - 122678785 I e calJac3.chr22 45873754 3 + 49145316 I a score=451536.000000 s hg38.chr19_GL949747v2_alt 556921 198 + 729520 cctgtcatcccagccctttgggag-------------------------------------------------------------------gccgaagcaggcaggtcatctgaggttgggagttcaagaccagcctggccaacatggc-aaaacccc-gtttctactaaaaatatgaaaaaaattacctgggtat-gtggtgtgtgcctgtagtcccagctactccaGAGGCTGGAAC-----------------------------------------------------------------------------ACAGT-GAGACTCTATCTC-----AAAAAAAAA-----------AA s panTro4.chr19 59832031 203 + 63644993 cctgtaatcccagccctttgggag-------------------------------------------------------------------gccgaagcaggcaggtcatctgaggttgggagttcaagaccagcctggccaacatggc-aaaacccc-gtttctactaaaaatatgaaaaaaattacctgggtat-gtggtgtgtgcctgtagtcccagctactccagaggctgGAAC-----------------------------------------------------------------------------ACAGT-GAGACTCTATCTC-----AAAAAAAAAA------AAACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56744921 264 + 60714840 cctgtaatcccagacctttgggagaccaaagccagcaggtcaTACCACTGCACTCCAGCCTCGGAGgcctgtaatcccagacctttgggaagccgaagccagcaggtcatctgaggtcgggagttcgagaccagcctggccaacatgcc-aaaacccc---ctctactaaaaatatgaaaaaaattagctgggtgt-gtggtgtgtgcctgtagtcccagctactccagagtctgGAAC-----------------------------------------------------------------------------AAAGCAAAGACTCTAGCTC-----AAAAAAAAC-----------AA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103282134 209 - 106955855 cctgtaatcccagccctttgggag-------------------------------------------------------------------gccgaagcgggcaggtcatctgaggtcaagagttcaagatcagcttggccaacatggc-aaaacccc-gtctctattaaaaatatgaaaaaaattacctgggtgt-gtggtgtgtgcatgtagtcccaggtactccggtggctgaaac-----------------------------------------------------------------------------aCAGC-GAGACTCTATCTC-----AAAAAAAAACTCGTCTCAAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60570862 206 + 64156825 cctgtaatcccagccctttgggag-------------------------------------------------------------------gccaaagcaggcaggtcatctgagattgggagttcgagaccagcctggc-----tggcaaaaacgcc-atctctactaaaaatatgaaaaaaattagccaggtgtggtggcgtgtgcctgtagtcccagctactcgggaggctgGAAA-----------------------------------------------------------------------------AGAGC-GAGACTCTATCTC-----AAAAAAAAAAACAAACAAACAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55697268 207 + 59248254 cctgtaatcccagccctttgggag-------------------------------------------------------------------gccaaagcaggcaggtcatctgagattgggagttcgagaccagcctggc-----tggcaaaaacgcc-atctctactaaaaatatgaaaaaaattagccaggtgtggtggcgtgtgcctgtagtcccagctactcgggaggctggaac-----------------------------------------------------------------------------agAGC-GAGACTCTATCTC----aaaaaaaaaaaacaaacaaacaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47809869 210 + 51301725 cctgtaatcccagccctttgggag-------------------------------------------------------------------gccgaagcaggcaggtCATCtcagattgggagttcgagaccagcctggc-----tggc-aaaacgcc-gtctctactaaaaatatgaaaaaaattagccaggtgtggtggcgtgtgcctgtagtcccagctactcgggaggctggaac-----------------------------------------------------------------------------agagc-cagactctatctcaaaaaaaaaaaaaaaacaaacaaacaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47526325 205 + 50890351 cctgtaatcccagccctttgggag-------------------------------------------------------------------gccgaagcaggcaggtcatctgagattgggagttcgagaccagcctggc-----tggc-aaaacgcc-gtctctactaaaaatatgaaaaaaattagccaggtgtggtggcgtgtgcctgtagtcccagctattcgggaggctggaac-----------------------------------------------------------------------------agAGC-GAGACTCTATCTC-----AAAAAAAAAACCAAACAAACAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45873757 282 + 49145316 cctgtaatccccgcgcttcggaag-------------------------------------------------------------------gtagaggcgggcacatcacttgaggtcgggagtttgagaccagcctggccaacacagg-gaaacccctgtctctactaaaaatac---aaaaattagctgggcatggtggtgcatgcctgtaattacagctactc--ggggctgaagcaggagaatcacttgaactcgggaggcagagattacagtgagctgagattgtgccattgcacaccagcctgggcgacaagagt-gaaactgtgtctc-----aaaaaaaaaaaagaa-aaagaa i calJac3.chr22 I 3 C 0 e canFam3.chr1 19991395 703 - 122678785 I a score=1042435.000000 s hg38.chr19_GL949747v2_alt 557119 326 + 729520 AAATAGAAGACATGACTGGTGCAAAGACACATGCTCACAAGTGCTAGAATGGAATTCCTCGTCAGGTTCGTCCATCTGTGGACCCTTCCACTTTACCTGCTGGATGAAGCTCCTGGGACCCGCAGGGTGAGGTGGGACCTTGTAAAGCTGCAGAACGTCATGGGGTAGACCCAAGGGAAGGAG-TGCTGGGGTGGAGGAGGTCAAAACCATCCTCTTTT-------CTTCACTTCCCTTATCATCAGCAGACACTTGGGGCACCTACCTTTTAACCACAGAGACGGGACTCCAGAAAGGTAAGTAGACAGCTGGG-GCCATAGGCTCTGAAGGAA s panTro4.chr19 59832234 326 + 63644993 AAATAGAAGACATGACTGGTGCAAAGACACATGCTCACGAGTGCTAGACTGGAATTCCTCGCCAGCTTTGTCCATCTGTGGACCCTTCCACTTTACCCGCTGGATGAAGCTCCTGGGACCTGCAGGGTGGGGTGGGACCTTGCAAAGCTGCAGAACGTCATGGGGTAGACCCAAGGGAAGGAG-TGCTGGGGCGGAGGAGGTCAAAACCATCCTCTTTT-------CTTCACTTCCCTTATTATCAGCAGACCCTTGGGACACCTACCTTTTAACCACAGAGATGGGACTCCAGAAAGGTAAGTAGACAGCTGGG-GCCATAGGCTCTGAAGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56745185 326 + 60714840 AAATAGAAGACATAACTGGTGCAAAGACACATGCTCATGAGTGCTAGACTGGAATTCCTCCTCAGGTTTGTCCATCTGTGGACCCTTCCACTTTACCTGCTGGATGAAGCTCCTGGGACCTGCAGGGTGGGGTAGGACCTTGCAAAGCTGCAGAACGTCATGGGGTAGACCCAAGAGAAGGAG-TGCTGGGGTGGAGGAGGTCAAAACCATCCTCTTTT-------CTTCACTTCCCTTATTATCAGCAGACCGTTGGGATACCTACCTTTTAACCACAGAGACGGGACTCCAGAAAGGTAAGTAGACAGCTAGG-GCCATAGGCTCTGAAGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103282343 326 - 106955855 AAATAGAAGACATGACTGGTGCAAAGACACAAGCTCATGAGTGCTAGACTGGAATTCATCTTCAGCTTTGTCCATCTGTGGACCCTTCCACTTTACCTGCTGGATGAAGCTCCTGGGACCTGCAGGATGGGGTGGGACCTTGCAAAGCTGCAGAATGTCATGGGGTAGACCCAAGAGAAGGAG-TGCTGGGGTGGAGGAGGTCAAAACCGTCCTCTTTT-------CTTCACTTCCCTTATTATCAGCAGACCCCTGGGACACCTACCTTGTAACCACAGAGACGGGACTCCAGGAAGGTAAGTAGACAGCTGAG-ACCGTAGGCCCTGAAGGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60571068 326 + 64156825 AAATAGAAGACATGATTGGTGCAAAGATACATGCTCATGAGTTCTAGACTGGAATTCCTCCTCCGGTGTGTCCATCTGTGGACCCTTCCGCTTTACCTGCTGGATGAAGCTCCTGGGACTTGCAGGGTAGGGTAGGACCTTGCAAAGCTGCAGAACGTCATGGGGCGGACCCAAGGGAAGGAG-GGCGGGGGCGGAAGACGTCAACATCATTCTCTTTT-------CTTCACTTCCCTTATTATCAGCAGACTCTTGGGACACCTGCCTTTTAACCAGAGAGACGGGACTCCAGAAAGGTAAGTAGACACCTGGG-GCCATAGGCTCTGAAGGAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55697475 326 + 59248254 aaaTAGAAGACATGATTGGTGCAAAGATACATGCTCATGAGTTCTAGACTGGAATTCCTCCTCCGGTGTGTCCATCTGTGGACCCTTCCGCTTTACCTGCTGGATGAAGCTCCTGGGACTTGCAGGGTAGGGTAGGACCTTGCAAAGCTGCAGAACGTCATGGGGCGGACCCAAGGGAAGGAG-GGCGGGGGCGGAAGATGTCAACATCATTCTCTTTT-------CTTCACTTCCCTTATTATCAGCAGACTCTTGGGACACCTGCCTTTTAACCAGAGAGACGGGACTCCAGAAAGGTAAGTAGACACCTGGG-GCCATAGGCTCTGAAGGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47810079 326 + 51301725 aaatagaagacaTGATTTGTGCAAAGATACATGCTCATGAGTTCTAGACTGGAATTCCTCCTCAGGTTTGTCCATCTGTGGACCCTTCTGCTTTACCTGCTGGATGAAGCTCCCGGGACCTGCAGGGTAGAGTAGGACCTTGCAAAGCTGCAGAACGTCATGGGGTGGACCCAAGGGAAGGAG-GGCGGGGGCGGAAGACGTCAacatcattctctttt-------cttcacttccCTTATTATCAGCAGACTCTTGGGACACCTGCCTTTTAGCCACAGAGACGGGACTCCAGAAAGGTAAGTAGACACCTGGG-GCCATAGGCTCTGAAGGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47526530 326 + 50890351 AAATAGAAGACATGATTGGTGCAAAGATACATGCTTATGAGTTCTAGACTGGAATTCCTCCTCAGGTTTGTCCATCTGTGGACCCTTCCGCTTTACCTGCTGGATGAAGCTCCTGGGACCTGCAGGGTAGGGTAGGACCTTGCAAAGCTGCAGAACGTCATGGGGTGGATCCAAGGGAAGGAG-CATGGGGGCAGAAGACGTCAACATCATTCTCTTTT-------CTTCACTTCCCTTATTATCAGCAGACTCTTGGGACACCTGCCTTTTAACCACAGAGACGGGACTCCAGAAAAGTAAGTAGACACCTGGG-GCCATAGGCTCTGAAGGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45874039 316 + 49145316 aTGTAGAAGACGTGACCGTTGCAAAGACACACACTCATGAGTGCTAGAGTGGACTCCCTCCTCAGGCTTGTCCATCTGCGGACCCTTCCACTGTACCTGCTGGATGAAGCT-CTGGGACCTGCAGGGC-GGGTGGGACCT--------TGCAGAAGGTCATTGGGTATACCCAAGGGAAGGAG-CGCTGGGGTGGAGGAGGCCAACACCATCCCCTTTT-------CTTTACTTCCCTTATTGTTGGCAGACTCTGGGGACACCTACCTTTTATCCACAGAGACGGGGCTCCAGAAAGGTAAGTGGACACCTGGG-GCCGAGGGCTGTAAAGGAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19992098 319 - 122678785 AGATGGAAGACACATCTGGCATGAGGCC---------------CTGGAGCTGAATTCCCCCTTGGGTTTGCCTGCCCTTTGGCTCCTGCTCTCTACCTGCCAGACGAAGCCACTAGGACCTGGAGGTGGGGTGGGGACCTGGAAAAGCTGCAGAAGGTCATGGGGTCCATCCAAGGGGAGGAGAGGCTCCCTCAGCAGAGACCAACACCATCTCTTTTTCTCCCTACTTCACTTCCC-TATCATCCGCAGAACCTTGGGACACCTACTTGTTAGCCACAGAAGCAGAATTCCAGCAAGGTAAGCAAGCAATGGAGTGCTGCACACTGTGAAGGAA i canFam3.chr1 I 703 I 37 a score=531260.000000 s hg38.chr19_GL949747v2_alt 557445 188 + 729520 GGGGCTGGGCATAGAGTA--GACCTAGGAAGGGAATCTAAAT---GGGAACAAGAGGGTGTCCTT-----ggccaggcgcagtagctcacacctgtaatctcagccctttgggaggccgaggcgggcagatcatctgaggtcgggagttcaagaccagtctggccaacatggcgaaatcccatctctactaaaaatac s panTro4.chr19 59832560 188 + 63644993 GGGGCTGGGCATAGAGTA--GACCTAGGAAGGAAATCTAAAT---GGGAACAAGAGGGTGTCCTT-----ggccaggcgcagtagctcacacctgtaatctcagccctttgggaggccaaggcgggcagatcatctgaggtcgggagttcgagaccagtctggccaacatggcgaaatcccatctctactaaaaatac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56745511 196 + 60714840 GGAGCTGGGTATAGAGTA--GACCTAGGAAGGAGATCGGGATGGAGGGAACAAGAGGGTGTCCTTGGCCAggccaggcacagtggctcacacctataatctcagccctttgggaggccgaggcgggcagatcatctgaggtcgggagttcgagaccggtctgaccaacatggcgaaaccccatctctactaaaaataa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103282669 191 - 106955855 GGAGCTGGGCATAGAGTA--GACCTAGGAAGGAGATTGAGATGGAGGGAACAAGAGGGTGTCCTT-----ggccaggcacagtggctcacacctgtaatctcagccctccaggaggccgaggcgggcagatcatctgaggtcgggagttcgagaccggcctggccaacatggcgaaaccccatctctactaaaaatac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60571394 193 + 64156825 GGAGCTGGGCATAGAGTAATGACCTGGGAAGGAGATCGGGATGAACGGAACAAGAGGGTGTCCTT-----ggccaggcgcagtggctcacgcctgtaatcccagccctttgggaggccgaggcgggcagatcatctgaggtcaggagttcgagactggtctggccgatatggcgaaaccccatctctactaaaaatag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55697801 193 + 59248254 GGAGCTGGGCATAGAGTAATGACCTGGGAAGGAGATCGGGATGAACGGAACAAGAGGGTGTCCTT-----ggccaggcgcagtggctcacgcctgtaatcccagccctttgggaggccgaggcgggcagatcatctgaggtcaggagttcgagactggtctggccgatatggcgaaaccccatctctactaaaaatag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47810405 192 + 51301725 GGAGCTGGGCATAGAGTAATGACCTGGGAAGGAGATCGGGATGAACGGAACAAGA-GGCgtcctt-----ggccaggcgcagtggcttacgcctgtcatcccagccctttgggaggccgaggcaggtagatcatctgaggtcaggagtttgagactggtctGGCcgatatggcgaaaccccatctctactaaaaatag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47526856 193 + 50890351 GGAGCTGGGCATAGAGTAATGACCTGGGAAAGAGATCGGGATGAACGGAACAAGAGGGTGTCCTT-----ggccaggtgcagtggctcacgcttgtaatcccagccctttgggaggccaaggcgggcagattatctgaggtcaggagttcgagactggtctggccaatatggcgaaaccccatctctactaaaaatag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45874355 193 + 49145316 GGAGCTGGGTGGAGAGTCCCGAGCAGGGAAGGAGATGGGGATCAGTGAAACAGGAGGGTGTCCTT-----ggccaggtgcggtagcccacgcctgtaatcccagcacactgggaggccaaggcaggcggatcatctgaggtcaggagtttgagaccagcctggccaatgtggggaaaccccatctctagcaaaaatac i calJac3.chr22 C 0 I 299 e canFam3.chr1 19992417 37 - 122678785 I a score=419104.000000 s hg38.chr19_GL949747v2_alt 557633 194 + 729520 aaaaaaattagccaggcgtggtggcgtgtgcctgtagtcccagctacttgggaggctgagacaggagaatagcttgaacccaggaagtggaggttgcagtgagccg-agatcgtgccattgcactccagcctgggcgacaagactgaggctctgtct-caaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa s panTro4.chr19 59832748 174 + 63644993 aaaaaaattagccaggcatggtggcgtgtgcctgtagtcccagctacttgggaggctgagacaggagaatagcctgaacccaggaagtggaggttgcagtgagccg-agatcgtaccattgcactccagcctgggcgacaagactgaggctctggct-c--------------------aaaaaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56745707 183 + 60714840 aaaaaaattagccaggcgtggtggcgtgtgcctgtagtcccagctactcgggaggctgaggcaggagaatagcttgaacccaggaagtggaggtggcagtgagccg-agattatgccattgcactccagcctgggggacaagactgaggctctgttt-c-----------aaaaaaaaaaaaaaaaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103282860 164 - 106955855 aaaaaaattagccgggcatggtggcgtgtgcctgt-----------------atgctgaggcaggagaatagcttgaaccca-gaagcggaggttgcagtgagccg-agattgtgccattgcactccagcctgggagacaagactgaggctctgtct-c------------aaaaaaaaaaaaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60571587 173 + 64156825 ggaaaaattatccgggcatggtggtgcgtgtctgtagtcccagctacttgggtggctgaggcaggagaatcgcttgaacccgggaagtggaggttgcagtgagccg-agatagtgccactgtactccagcctgggcaacaagactgaggctccgtgtac----------------------aaaaaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55697994 171 + 59248254 gaaaaaattatccgggcatggtggtgcgtgtctgtagtcccagctacttgggtggctgaggcaggagaatcgcttgaacccgggaagtggaggttgcagtgagccg-agatcgtgccactgtactccagcctgggcaacaagactgaggctccgtgtac------------------------aaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47810597 171 + 51301725 aaaaaaattatccgggcatggtggtgcgtgcctgtagtcccagctacttgggtggttgaggcaggagaatcgcttgaacccgggaagtggaggttgcagtgagccg-agatcgcgccactgtactccagcctgggcaacaagactgaggctctgtgtac------------------------aaaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47527049 170 + 50890351 aaaaaaattatccgggcatggtggtgcatgcctgtagtcccagctacttgggtggctgaggcaggagaatcacttgaacccgggaagtggaggttgcagtgagccg-agatcgtgccactgtactccagcctgggcaacaagactgaggctctgtgtac-------------------------gaaaaaaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45874847 154 + 49145316 acaaaaattagccaggtgtggtggcgctcacctgaagtcccagctactcgggaggctgagacgagag-------------------gtggaggttgcagggagctgaagatcgcactgttgtactccagcctgggcaacaagatcaaggctctgtct-c----------------------aaaaaagaataaaaC i calJac3.chr22 I 299 C 0 e canFam3.chr1 19992417 37 - 122678785 I a score=777057.000000 s hg38.chr19_GL949747v2_alt 557827 212 + 729520 aGAGGGTGTCCTTACATCCCTGTCAGCGATCACCCTGTTCTC---CTGCCTACAGACCATGCCCTCTGGGATCACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTTCTAGTCCTGGTGGCTCTAGTGTGGTTCCTGGTTGAAGACTGGCTCAGCAGGAAGAGGACTAGAGAGCGAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG s panTro4.chr19 59832922 212 + 63644993 aGAGGGTGTCCTTACATCCCTGTCAGCGATCACCCTGTTCTC---CTGCCTACAGACCATGCCCTCTGGGATCACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTTCTAGTCCTGGTGGCTCTAGTGTGGTTCCTGGTTGAAGACTGGCTCAGCAGGAAGAGGACTAGAGAGCGAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56745890 212 + 60714840 aGAGGGTGTCCTTACATCCCTGTCAGCGATCACCCTGTTCTC---CTGCCCACAGACCATGCCCTCTGGGATCACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTCCTGGTCCTGGTGGCTCTAGTATGGTTCCTGGTTGAAGACTGGTTCAGCAGGAGGAGGACTAGAGAGCGAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG i ponAbe2.chr19 C 0 M 1634 s nomLeu3.chr10 103283024 212 - 106955855 aGAGGGTGTCCTTACATCCCTGTCAGCGATCACCCTGTTCTC---CTGCCCACAGACCATGCCCTCTGGGATCACACTGCCCAGAATTTCCTTCGGATGGGCCTGGCCTTCCTGGTCCTGGTGGCTCTAGTGTGGTTCCTGGTTGAAGACTGGCTCGGCAGGAAGAGGACTAGAGAGCGAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60571760 212 + 64156825 aGAGGGTGTCCTTACATCCCTGTCAGCAATCACCCTGTTCTCCTGCTGCCCACAGACCTTGCCCTCTGGG---ACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTCCTAGTCCTGGTGGCTCTAGTGTGTCTCCTGGTTGAAGATTGGCTCAGCAGGAAGAGGACTAGAGAGCAAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55698165 215 + 59248254 aGAGGGTGTCCTTACATCCCTGTCAGCAATCACCCTGTTCTCCTGCTGCCCACAGACCTTGCCCTCTGGGACCACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTCCTAGTCCTGGTGGCTCTAGTGTGTCTCCTGGTTGAAGATTGGCTCAGCAGGAAGAGGACTAGAGAGCAAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47810768 215 + 51301725 agagggtgtcCTTACATCCCTGTCAGCGATCACCCTGTTCTCCTGCTGCCCACAGACCTTGCCCTCTGGGACCACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTCCTGGTCCTGGTGGCTCTAGTGTGTCTCCTGGTTGAAGATTGGCTCAGCAGGAAGAGGACTAGAGAGCAAGCCAGCAGAGCTTCCACCTGGGAAGGCAGGAGAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47527219 215 + 50890351 aGAGCGTGTCCTTACATCCCTGTCAGCGATCACCCTGTTCTCCTGCTGCCCACAGACCTTGCCCTCTGGGACCACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTCCTGGTCCTGGTGGCTCTAGTGTGTCTCCTGGTTGAAGACTGGCTCAGCAGGAAGAGGACTAGAGAGCAAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45875001 212 + 49145316 AGAGGGTGTCCTTGGGTCCCTGTCAGCAATCACCCTGTTCTC---CTGCCCACAGAGCTTGCCCTCTGGGACCACACTGCCCAGAATCTCCTTCGGGTGGGCCTGGCCTTCCTGGTCCTGGTGGCTCTGGTGTGGCTCCTGGTTGAAGACTGGCTCAGCAGGAAGAGGACCAGAGGGCGAGCCAGCAGAACTTCCACTGGGCAATGCAGGAGAAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19992454 212 - 122678785 AGGTGGTGCCTGGCTATTCCTGTCAGTAATCAGTCTGTTCTT---CTCACCCCAGCCCCTGCCTTCTGGGATCACACTGCCCATAATATCCTTCAGATTGGTCTGGCTTTCCTGGTCCTGATGGCCCTCATGTGCCTCCTGGTTGATTACTGGCTTTGCAGGAAGAGGATACAAGAGCAAGCCAACAGGGCTTCACCTCAGGAATGCAGGAGAAG i canFam3.chr1 I 37 C 0 a score=255064.000000 s hg38.chr19_GL949747v2_alt 558039 111 + 729520 GCTG----AACACACAGACTCTTTGAA-GAATGACCATGAGACACAGTGGCCATGGGTGGATCTGAAAGCTGGTGTTGAGCCTGGGCGGCGTGAGCTCTGTGTTGGACCCACGGAG s panTro4.chr19 59833134 111 + 63644993 GCTG----AACACAAAGACTCTTTGAA-GAATGACCGTGAGACACAGTGGCCGTGGGTGGATCTGAAAGCTGGTGTTGAGCCTGGGCCGCGTGAGCTCTGTGTTGGACCCACGGAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103283236 109 - 106955855 GCCA----AATACAAAGACTC--TGAA-GAATGACCATGAGACACAGTGGCCATGGGTGGAACTGAAAGCTGGTGTTGAGCCTGGGCGGCGTGAGCGCTGTGTTGGACCCATGGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60571972 113 + 64156825 GTTGAACAAACACAAAGACTC--TGAA-GAATGACCATGAGACGCAGTGGCCATGGGTGGAACTGAAAGCTGGTGTTGAGCCTCGGTGGCGTGAGCTCTGTGTCAGACCCACGGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55698380 113 + 59248254 GTTGAACAAACACAAAGACTC--TGAA-GAATGACCATGAGACGCAGTGGCCATGGGTGGAACTGAAAGCTGGTGTTGAGCCTCGGTGGCGTGAGCTCTGTGTCAGACCCACGGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47810983 115 + 51301725 GTTGAACAAACACAAAGACTCTTTGAA-AAATGACCATGAGACGCAGTGGCCATGGGTGGAACTGAAAGCTGGTGTTGAGCCTGGGTGGCGTGAGCTCTGTGTCAGACCCGTGgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47527434 111 + 50890351 GTTG----AACACAAAGACTCTTTGAA-GAATGACCACGAGACGCAGTGGCCATGGGTGGAACTGAAAGCTGGTGTTGAGCCTGGGTGGCATGAGCTCTGTGTCAGACCCACGGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45875213 95 + 49145316 CTTG----AACACAAAGACTCTCTGAA-GAACGCCCGAGAGATGCGGCAGCCGTGGGTGGAACTGAAAGCCGGTGTTGAGC----------------CTGTGTTGAACCCACAGAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19992666 112 - 122678785 GTTCAG--AACACAGAGAACCCCTGGACAAATGACCAAGAGATGTGCTGGCCACAGTTAGAGCTGAACACTGGCATTGACCTTGGGCTGTGTGAG--CTGTGTTGCACCCATGGAG i canFam3.chr1 C 0 I 4 e ponAbe2.chr19 56746102 1634 + 60714840 M a score=1158352.000000 s hg38.chr19_GL949747v2_alt 558150 530 + 729520 GAGGGAGTCACTGCAGGGA-------AAGAGGGACACTGGCATTCCATTTGTCAGAGCATCCCGGACGATGCAGAGGGTGGGAGAACTACATGCTAAAtttc----------tttt----tttttttttttgagacagagtttt-ctcttgttgcccaggctggagtgcaatggcgcgatcttggctcactgcaacctctagctctccatccctcgggttcaagtgattctcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccac-cccagctaa--ttttgtatttttagtggagacggggtttctccctgtt-----ggctggtctcgaactcctgacctcaagtgat-ctccccgccttggcctcccaaagggctgggattacaggcataagccgctgcgcccagccACTGAATTTCTTCTGTAGACAAATCCTATGGTCTCTTCTAGGCTCTAACTATTTTTGTACCACTTACTGCAAACCATACTTTTAACCACTCTGGTCTTTTCTGAAAAGATCTCTCCTTCTTTAACAGGATGGCCATG s panTro4.chr19 59833245 527 + 63644993 GAGGGAGTCACTGCAGGGA-------ACGAGGGACACTGGCATTCCATTTGTCAGAGCATCCCGGACGATGCAGAGGGTGGGAGAACTACATGCTAAAtttc-------------t----tttttttttttgagacagagtttt-ctcttgttgcccaggctggagtgcaatggcgcgatcttggctcactgcaacctctacctctccatccctcgggttcaagtgattctcctgcctcagcctcctgagtagctggaattacaggcatgcgccaccac-cccagctaa--ttttgtatttttagtggagacggggtttctccctgct-----ggctggtctcgaactcctgacctcaagtgat-ctccccgccttggcctcccaaagggctgggattacaggcataagccgctgcgcccagccACTGAATTTCTTCTGTAGACAAATCCTATGGTCTCTTCTAGGCTCTAACTATTTTTGTGCCACTTACTGCAAACCATACTTTTAACCACTCTGGTCTTTTCTGAAAAGATCTCTCCTTCTTTAACAGGAGGGCCATG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103283345 540 - 106955855 GAGGGAGTCACTGCAGGGA-------ACAAGGGACACTGGCATGCCATTTGTCAGAGCTTCCCAGACAATGCAGAGGGTGGGAGAACTACATGCTAAAtttcttgttt-ttttttt----tttttttttttgagacagagttttgctcttgttgcccaggctggagtgcaatggcgcgatcttggctcactgcaacctctacctctccatccctggggttcaagcgattctcctgactcagccccccgagtagctgggataacaggcatgcgccaccac-ctcggctaa--ttttgtatttttagcagagacggggtttctccctgtt-----ggctgttctcgaactcctgacctcaagtgat-ctccccgcctcggcctcccaaagggctgggattacaggcatgagctgccacgtgcagccACTGAATTTCTTCTGTAGACACATCCTACAGTCTCTTCTAGGCTCTAACTATTTTTGTGCCACTTACGGCAAACCATACTTTTAAGCACTCTGTTCTTTTCTGAAAAGCTCTCTCCTTCTTTAACAGGATGGCCACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60572085 554 + 64156825 GAGGGAGTCACTGCAGGGAACAGGGGACAGGGGACACTGGCATTCCATTTGTCAGAGCATCCCGGACGACGCAGAGGGTGGGAGAACTACATGCTAAGtttctttctggttttttt----tttttttttttgagacagagttttgctcttgttgcccaggctggagtgcaatggcgtgattttggctcactgcaacctctacctctccatcccttgggctcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccatgcctggctaa--ttttgtatttttagtagagacggggtttctccctgttggtcaggctggtcttgaactcctgatctcaagagat-ccccccgcctcggcctcccaaagggctgggattacaggcatgagctgccacgcccagccGCTGAATTTCTTTTGTAGACAAATCCTATGGTCTCTTCTAGGCTCTAAGTACTTTTGTGCCACTTACTGCAAACCATACTTTTAAGCACTCTGGTCTTTTCTGAAAAGATCTCTTCTTCTTTAACAGGATGGCCATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55698493 554 + 59248254 GAGGGAGTCACTGCAGGGAACAGGGGACAGGGGACACTGGCATTCCATTTGTCAGAGCATCCCGGACGACGCAGAGGGTGGGAGAACTACATGCTAAGtttctttctggttttttt----gttttttttttgagacagagttttgctcttgttgcccaggctggagtgcaatggtgtgattttggctcactgcaacctctacctctccatcccttgggctcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccatgcctggctaa--ttttgtatttttagtagagacggggtttctccctgttggtcaggctggtcttgaactcctgatctcaagagat-ccccccgcctcggcctcccaaagggctgggattacaggcatgagctgccgcgcccagccGCTGAATTTCTTTTGTAGACAAATCCTATGGTCTCTTCTAGGCTCTAAGTACTTTTGTGCCACTTACTGCAAACCATACTTTTAAGCACTCTGGTCTTTTCTGAAAAGATCTCTTCTTCTTTAACAGGATGGCCATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811098 551 + 51301725 gaggaagtcactgcagggA-------ACAGGGGACACTGGCATTCCATTTGTCAGAGCATCCCGGACGACGCAGAGGGTGGGAGAACTACATGctaaatttctttctggttttttttttctttttttttttgagacagagttttgctcttgttgcccaggctggagtgcaatggcatgattttggctcactgcaacctctacctctccatcccttgggctcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccatgcctggctaa--ttttgtatttttagtagagacggggtttctccctgttggtcaggttggtcttgaactcctgatctcaagagat-ccccccgcctcggcctcccaaagggctgggattacaggcatgagctgccgcgccCGGCCGCTGAATTTCTTTTGTGGACAAATCCTATGGTCTCTTCTAGGCTCTAAGTATTTTTGTGCCACTTACTGCAAACCATACTTTTAACCACTCTGGGCTTTTCTGAAAAGATCTCTTCTTCTTTAACAGGATGgccatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47527545 532 + 50890351 GAGGGAGTCACTGCAGGGA-------ACAGGGGACACTGGCATTCCGTTTGTCAGAGCATCCTGGACGATGCAGAGGGTGGGAGAACTACATGCTAAAtttctgtttg------------tttttttttttgagacagagttttgctcttgttgcccaggctggagtgca-----gtgattttggctcactgcaacctctacctctccatcccttgggctcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccatgcctggctaa--ttttgtatttttagtagagacgaggtttctccctgttggtcaggttggtcttgaactcctgatctcaagagatcccccccgcctcggcctcccaaagggctgggattacaggcatgagctgccgcgcccagccGCTGAATTTCTTTTGTAGACAAGTCCTATGGTCTCTTCTAGGTTCTAAGTATTTTTGTGCCACTTACTGCAAACCATACTTTTAACCACTCTGGTCTTTTCTGAAAAGATC---TCTTCTTTAACAGGATGGCCATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45875308 524 + 49145316 GAGGGAGTCACTGCAGGAA-------ACAAGGGACAATGCCATTCCATTTGTCAGACCATCCCAGATGACACAGGAGGTGGGAGAA--ACAAGCTAAATTTCTTCGTA------------Atttttttcctgaggcagagtctggctc-tgtcatccaggctggagtgcagtggcgctatctcagctcactgaaacctccgcctccc--------aggttcgagtgattctcctgcctcagcctcctgagtagctgggattacatgtacgcaccaccacacctagctaattttttgtatttttaatagagacggggtttcaccgcactagccaggatggtctcgatctcccgacctca--tgat-----ccgcctcggcctcacaaagtgctgggattacaggcgtgagccaccacccctggccACTAAATTTCTTTTGTAGACAAATCCTATGGTCTCTTCTAGGCTCTAAGTATGTTTGTGCAACTTACTGCAAACCATACTTTTAACAGCTCTAGTCTTTTCTGAAAAGACCTCTCCTTCTCTAATAGAACGGCCTTG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19992778 4 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M a score=170769.000000 s hg38.chr19_GL949747v2_alt 558680 75 + 729520 GAAATA--TTTTTTTCCTACTTTGGTCTT---------TTTTTCTTTCCTTTCTCTGCA-GGAAGCCATTCAAAATAGTTAATAACC s panTro4.chr19 59833772 75 + 63644993 GAAATA--TTTTTTTCCTACTTTGGTCTT---------TTTTTCTTTCCTTTCTCTGCA-GGAAGCCATTCAAAATAGTTAATAACC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103283885 76 - 106955855 GAAATA--TTTTTTTCCTACTTTGGTCTT---------TTTTTCTTTCCTTTCTCTGCAGGGAAGCCATTCAAAATAGTTAATAACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60572639 73 + 64156825 GAAATATTTTTTTTTTCTACTTTGGTC-------------TTTCTTCCCTTTCTCTGCA-GGAAGCCATTCAAAATAGTTAATGACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55699047 73 + 59248254 GAAATATTTTTTTTTTCTACTTTGGTC-------------TTTCTTCCCTTTCTCTGCA-GGAAGCCATTCAAAATAGTTAATGACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811649 73 + 51301725 gaaatattttttttttctactttggtc-------------tttcttccctttctctgca-ggAAGCCATTCAAAATAGTTAATGACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528077 72 + 50890351 GAAATA-TTTTTTTTTCTACTTTGGTC-------------TTTCTTTCCTTTCTCTGCA-GGAAGCCATTCAAAATAGTTAATGACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45875832 75 + 49145316 GAAATA--TTTTCTTCCTACTCTGGGCCT---------TATTTCTTCCCTTTCTCTGCA-GGGAAGCATTCaaaatagttaataacc i calJac3.chr22 C 0 I 160 s canFam3.chr1 19992782 83 - 122678785 GGAACA--TTTCCTTCCTAGTTTGGTCTTTGTCTCTAGTTCTTCTTTCCTTT-GCTGCA-ATATATCATTCAAGATATTTAACAACT i canFam3.chr1 I 4 C 0 e ponAbe2.chr19 56746102 1634 + 60714840 M a score=103809.000000 s hg38.chr19_GL949747v2_alt 558755 38 + 729520 AATATAGAATAGGTCTGTATCAAATGGTTCAGGAGGCA s panTro4.chr19 59833847 38 + 63644993 AATATAGAATAGGTCTGTATCAAATGGTTCAGGAGGCA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103283961 38 - 106955855 AATATAGAATAGGTCTATACCAAATGGTTCAGGAGGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60572712 38 + 64156825 AATATAGAATAGGTTTGTATCGAATGGTTCAGGAGGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55699120 38 + 59248254 AATATAGAATAGGTTTGTATCGAATGGTTCAGGAGGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811722 38 + 51301725 AATATAGAATAGGTCTGTATCGAATGGTTCAGGAGGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528149 38 + 50890351 AATATAGAATAGGTCTGTATCGAATGGTTCAGGAGGCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45876067 38 + 49145316 AATATAGAATAGGTCTGAATCAAATGGTTCAGGAGGCA i calJac3.chr22 I 160 C 0 s canFam3.chr1 19992865 38 - 122678785 AGTACAGAATAGGCATTTATCAAGGGGAACATGAGCCA i canFam3.chr1 C 0 I 79 e ponAbe2.chr19 56746102 1634 + 60714840 M a score=437001.000000 s hg38.chr19_GL949747v2_alt 558793 199 + 729520 TTGTGGCAACAACCAGTTGTAGAGAAGCAGCTTTATAAGTGAATCCTgccaggcacggtggctcacacctgtaatcccaacactttgggaggctgaggcgggcagatcacctgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaactCggccaggcacggtggct s panTro4.chr19 59833885 199 + 63644993 TTGTGGCAACAACCAGTTGTAGAGAAGCAGCTTTATAAGTGAATCCTgccaggcacggtggctcacacctgtaatcccaacactttgggaggctgaggcgggcggatcacctgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattCggccaggcacggtggct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103283999 192 - 106955855 TTGTGGCAACAACCAGTCATAGAGAAGCACC-------GTGAATCCTgccgggcacggtggctcacacctgtaatcccaacactttgggaggctaaggcaggcagatcacctgaggtcaggagttcgagaccagccttgccaacacaattaaaccccatctctactaaaaatacaataattCAgccaggcacggtggct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60572750 198 + 64156825 TTGTGGCAACAGCCAGTCATAGAGAAGCAGCTTTATAAGTGAATCCTgccgggggcggtggctcatgcccataatcccaacactttgggagactgaggtgggcagatcacctgaggtaaggagttcgagaccagcctggccaacacgatgaacccttatctctactaaaaatacaaaaatt-agccaggtatggtggtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55699158 198 + 59248254 TTGTGGCAACAGCCAGTCATAGAGAAGCAGCTTTATAAGTGAATCCTgccgggggcggtggctcatgcccataatcccaacactttgggagactgaggtgggcagatcacctgaggtcaggagttcgagaccagcctggccaacacgatgaacccttatctctactaaaaatacaaaaatt-agccaggtatggtggcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811760 198 + 51301725 TTGTGGCAACAGCCAGTCATAGAGAAGCAGCTTTATAAGTGAATCCTGCCGGGGGCGGTGgcttatgcccataatcccaacactttgggagactgaggtgggcagatcacctgaggtcaggagttcgagaccagcctggccaacacgatgaacccttatctctactaaaaatacaaaaatt-agccaggtgtggtggtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528187 198 + 50890351 TTGTGGCAACAACCAGTCGTAGAGAAATAGCTTTGTAAGTGAATCCTgccgggggcggtggctcatgcccataatcccaacactttgggagactgaggtgggcagatcacctgaggtcaggagttcgagaccagcctggccaacacgatgaacccttatctctactaaaaatacaaaaatt-agccaggtatggtggca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45876105 199 + 49145316 TCGCGGCCACAACCAGTCACAGAGAAGCAGCTTTGTAAGTGAATCCTgctgggcgcggtgactcacacctgtaatcccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattcagcccgacacagtggTT i calJac3.chr22 C 0 I 2755 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M a score=31152.000000 s hg38.chr19_GL949747v2_alt 558992 17 + 729520 catgcctgtaatcccag s panTro4.chr19 59834084 17 + 63644993 catgcctgtaatcccag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284191 17 - 106955855 catgcctgtaatcccag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60572948 17 + 64156825 tgtgcctgtaatcccag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55699356 17 + 59248254 tgtgcctgtaatcccag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811958 17 + 51301725 tgtgcctgtaatcccag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528385 17 + 50890351 tgtgcctgtaatcccag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I a score=430.000000 s hg38.chr19_GL949747v2_alt 559009 1 + 729520 c s panTro4.chr19 59834101 1 + 63644993 c i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284208 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60572965 1 + 64156825 c i rheMac3.chr19 C 0 I 422 s macFas5.chr19 55699373 1 + 59248254 c i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811975 1 + 51301725 c i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I e chlSab2.chr6 47528402 0 + 50890351 C a score=51456.000000 s hg38.chr19_GL949747v2_alt 559010 134 + 729520 actttgggaggccaaggtgggaggatcacctgaggtcaggagttcgaga-------------------------------gcagcctggccaacatggtgaaaccacatctc-------------tactaaaaatataaaaattagccaggtatg--gtggcgtgtgcttgtaatcccag s panTro4.chr19 59834102 106 + 63644993 actttgggaggccaaggtgggaggatcacctgaggtcaggagttcgaga-------------------------------gcagcctggtcaacatggtgaaaccacatctc-------------tactaaaaatacaaaaattag------------------------------ccag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284209 133 - 106955855 actttgggaggccaaggcgggaggatcacctgaggtcaggagttcaaga-------------------------------ccagcctggccaacacaatgaaaccccatctc-------------tactaaaaatacaacaattagccaggtatg--gtggcgtgtgcttgtgtc-ccag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55699374 180 + 59248254 tacttaggaggctgaggcaggagaatagcttgaacccgcgaggcagaggctgcagtgagccaagatcgcaccactgcactccagcctgggtgatagagcaagactctgtctcaaaaaataaataaaaatacaaatacaaaaattagccaggcatgatgtgggacttgtctgtgatctcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811976 177 + 51301725 tacttgggaggctgaggc---agaatagcttgaacccgcgaggcagaggctgcagtgagccaagatcgtaccactgcactccagcctgggtgatagagcaagactctgtctcaaaaaataaatacaaatacaaatacaaaaattagccaggcatgatgtgggacatgtctgtgatcccag i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I e chlSab2.chr6 47528402 0 + 50890351 C e rheMac3.chr19 60572966 422 + 64156825 I a score=53428.000000 s hg38.chr19_GL949747v2_alt 559144 49 + 729520 ctactcaggaggctgaggcaggagaatagcttgaacccgggaggcggag s panTro4.chr19 59834208 49 + 63644993 ctactcaggaggctgaggcaggagaatagcttgaacccgggaggcggag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284342 47 - 106955855 ctact-aggaggctgaggcaggagaatagcttgaacccaggaggcaga- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55699554 49 + 59248254 ctactcaggaggctgaggcaggagaatcacttaaacccagaaagcagat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47812153 49 + 51301725 ctactcaggaggctgaggcaggagaatcacttgaacccagaaagcagat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528402 49 + 50890351 ctactcgtgagactgaggcaggagaatcacttgaacccagaaagcagac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I e rheMac3.chr19 60572966 422 + 64156825 I a score=204147.000000 s hg38.chr19_GL949747v2_alt 559193 133 + 729520 gctgcagggagccaagatcgcaccactgcactccagcctacgtgacagagcaagattctgtctcaaaaaaaaaaagaaaaaaaaaa---aata--aGTGACTCCTGGCTGCATCCCAACCATACCCCAATTCCTTCTA s panTro4.chr19 59834257 129 + 63644993 gctgcagggagccaagatcgcaccactgcactccagcctatgtgacagagcaagattctgtctcaaaaaagaaaag----aaaaaa---aata--aaTGAGTCCTGGCTGCATCCCAACCATACCCCAATTCCTTCTA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284389 129 - 106955855 gctgcagggagccaagatcgcaccactgcactccaacctgggtgacagagcaagactctgtctcaaaaaaaagaaa----ataaaa---aaaa--aGTGAGTCCTGGCTGCATCCCAACCATACCCCAATTCTTCCTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60573388 129 + 64156825 gctgcagtgagccgagatcacaccactgcactccatcctgggtgatagagcaaga--ctgtctcaaaaaaaataaa----agaaaa---aataataaTGAGTCCTGGCTACATCCCAACCACGCCCCAATTCCTCCTA i rheMac3.chr19 I 422 I 1283 s macFas5.chr19 55699603 129 + 59248254 gctgcagtgagccgagatcacaccactgcactccatcctgggtgatagagcaaga--ctgtctcaaaaaaaagaaa----agaaaa---aataataaTGAGTCCTGGCTGCATCCCAACGACGCCCCAATTTCTCCTA i macFas5.chr19 C 0 I 9 s papAnu2.chr19 47812202 129 + 51301725 gctgcagtgagccgagatcacaccactgcactccagcctgggtgatagagcaaga--ctgtctcaaaaaaaagaaa----agaaaa---aataataatgagtcCTGGCTGCATCCCAACGACGCCCCAATTCCTCCTA i papAnu2.chr19 C 0 I 9 s chlSab2.chr6 47528451 134 + 50890351 actgcagtgagccgagatcacaccactgcactccatcctgggtgatagagcaagactctgtctcaaaaaaaagaaa----gaaaaaaGTAATAATAATGAGTCCTGGCTGCATCCCAACCACGCCCCAATTCCTCCTA i chlSab2.chr6 C 0 I 56 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I a score=33908.000000 s hg38.chr19_GL949747v2_alt 559326 70 + 729520 ACCACAGAATTATTCCATCTTCTCTTCCtttttttt---------ttttttctttttttttgtttgttttgttGGGACA s panTro4.chr19 59834386 79 + 63644993 ACCACAGAATTATTCCATCTTCTCTTCCttttttttttttttttcttttttttttttttttgtttattttGTTGGGACA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284518 57 - 106955855 ACCACAGA---ATTCCATCTTCTCTTCCtttttttt-------------------ttttttgtttgttttgttGGGACA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55699741 57 + 59248254 ACCACAGA---ATTCCATCTTCTTtttgttttttgt-------------------ttttgtttttgttttgttgggacg i macFas5.chr19 I 9 C 0 s papAnu2.chr19 47812340 49 + 51301725 ACCACAGA---ATTccatcttc--------ttttgt-------------------ttttgtttttgttttgttgggacG i papAnu2.chr19 I 9 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I e chlSab2.chr6 47528585 56 + 50890351 I e rheMac3.chr19 60573517 1283 + 64156825 I a score=40217.000000 s hg38.chr19_GL949747v2_alt 559396 155 + 729520 GAATTTCACtttttttttttttaatgtaagttttagggtacatgtgcacaacgtgcaggttagttacatatgtatacatgtgccatgttggtgtgctgcacccactaactcgtcatttaacattaggtatatctcctaatgctatcccttccccc s panTro4.chr19 59834465 155 + 63644993 GAATTTCACtttttttttttttaatgtaagttttagggtacatgtgcacaacgtgcaggttagttacatatgtatacatgtgccatgttggtgtgctgcacccactaactcgtcatttaacattaggtatatctcctaatgctatccctcccccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284575 154 - 106955855 GAATTTCAC-ttttttttttttaacataagttttagggtacatgtgcacaacgtacaggttagttacataagtatatatgtgccatgttggtgtgctgcacccactaactcctcatttaacattaggtgtatcttctaatgctatccctcccccc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I e chlSab2.chr6 47528585 56 + 50890351 I e papAnu2.chr19 47812389 0 + 51301725 C e macFas5.chr19 55699798 0 + 59248254 C e rheMac3.chr19 60573517 1283 + 64156825 I a score=147890.000000 s hg38.chr19_GL949747v2_alt 559551 118 + 729520 gagtttcacttttgtcacccaggctggaatgcagtggtgcaatcttggctcactgccacctccacctccagggttcaaatgattctcctgcctcagcctcctgaatagctgggattat s panTro4.chr19 59834620 118 + 63644993 gagtttcacttttgtcacccaggctggaatgcagtggtgcaatcttggctcactgccacctccacctccagggttcaaatgattctcctgcctcagcctcctgaatagctgggattat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284729 118 - 106955855 gagtttcacttttgtcactcagggtggaatgcagtggtgcagtcttggctcactgccacctccacctccagggttctagtgattctcctgcctcagcctcctgaatagctgggattac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55699798 118 + 59248254 gaggttcactgttgttgcccaggatggagtgcagtggcgcgatctcagctcactgccacctccacctccagggttcaagcgattctcctgcctcagcctcctgaatagctgggactac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47812389 118 + 51301725 GAggttcactgttgttgcccaggatggagtgcagtggcgcgatctcagctcactgccacctccacctccagggttcaagcgattctcctgcctcagcctcctgaatagctgggactac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528641 118 + 50890351 gagtttcactgttgttgcccaggatggagtgcagtggcgcgatctcagctcactgccacctccacctccagggttcaagggattcgcctgcctcagcctcctgaatagctgggactac i chlSab2.chr6 I 56 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I e rheMac3.chr19 60573517 1283 + 64156825 I a score=991426.000000 s hg38.chr19_GL949747v2_alt 559669 597 + 729520 aggcatgcaccaccacgcccggctaatttttgtatttttagtagaaat-ggggtttcacaatgttggccagactggtcttgaactcctgacctcaggtgatccaccagcctcggcctcccaaagtgctggaattacaggtgtgagtcaccgtacccggccACCATCTTTGCTTCTTTATCCACACCTTGCcttgttcttcagggctctgcagagatatcatttcctcca--ag---------agtttccacaactccgactt--cacaaagatagcac----------ttttttt---------tttttttgagac--agtctcactctgtagcccaagctggcgtgcagtggcacaatctcagctcactgcaaccttcgcctctggggctcaagcgattctccttcctcagcctcccaagtagctgggactagaggcgcgcgccaccacacccggttaa-ttttttttgcatctttagtagaggtagggtttcatcatgttgccctgggtggtctcaaactcctgagttcaggtgatccccccgccttggcctctcaaagtgctaggattacaggcgtgagccactgcgcccagccaagacaacactttcctcatcccaaagcacctgttaa s panTro4.chr19 59834738 607 + 63644993 aggcatgcaccaccacgcccggctaatttttgtatttttagtagaaat-ggggtttcacaatgttggccagactggtcttgaactcctgacctcaggtgatccaccagcctcggcctcccaaagtgctggaattacaggtgtgagtcaccgtacccggccACCATCTTTGCTTCTTTATCCACACCTTGCcttgttcttcagggctctgcagagatatcatttcctcca--ag---------agtttccacaactccgactt--cacaaaggtagcacttttttttttttttttt---------tttttttgagac--agtctcactctgtagcccaagctggcgtgcagtggcacaatctcagctcactgcaaccttcgcctctggggctcaagcgattctccttcctcagcctcccaagtagctgggactagaggcacgtgccaccacacccggttaa-ttttttttgcatctttagtagagatagggtttcgtcgtgttgccctgggtggtctcaaactcctgagttctggtgatccccccgccttggcctctcagagtgctaggattacaggcgtgagccactgcgcccagccaagacaacactttcctcatcccaaagcacctgttaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56747736 601 + 60714840 aggcatgcaccaccatgcccagctgatttttgtatttttagtagaaatgggggtttcacaatgttggccagactggtcttgaactcctgacctcaggtgatccaccagcctcagcctcccaaagtgctgggattacaggtgtgagtcaccgcgcccggACACCAtcttcgcttctttatccataccttgccttgttcttcagggctctgcagagatatcatttcctccaagag---------agtttccacaactccaactt--cacaaaaatagctc-------tttttttttt---------tttttttgagacagagtctcactctgtagcccaagctggagtgcagtggcgcaatctcagctcactgcaaccttcacctctggggctcaagcgattctccttcctcagcctcccaagtagctgggactagaggcacgcgccaccacacccggttcatttttttttgcatttttagtagagatggggtttcatcatgttgccctgggtggtctcaaactcctgagctcaggtgatccccccaccttggcctcccaaagtgctgggatcacaggcgtgagccactgc-----gccaagacaacacttttctcatcccaaagcacctgttaa i ponAbe2.chr19 M 1634 C 0 s nomLeu3.chr10 103284847 600 - 106955855 aggcatgcaccaccacgcccggctaatttttgtatttttagtagaaat-ggggtttcacaatgttggccagactggtcttgaactcctgacctcaggtgatccaccagcctcggcctcccaaagtgctgggattacaggtgtgagtcaccgtgcccggccACCAtcttctcctctttatccgcaccttgccttgttcttcagggctctgcagaggtatcatttcctccaagag---------agcttccacagctctgactt--cacgaagacagcac-----------gttttt---------tttttctgagacagagtctcactctgtagcccaagctggagtgcagtggcgcaatctcagctcactgcaaccttcgcctctggggctccagcgactctccttcctcagcctcccaagtagctgggactagaggcacgcgccaccacacccggttaa-ttttttttgcatttttagtagagatggggtttcatcatgttgccctgggtggtctcaaactcctgagctcaggtgatccccccgccttggcctcctaacgtgctgggattacaggcatgagccaccaggcctggccaagacaacacttttctcatcccagagcacctgttaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55699916 601 + 59248254 aggcatgcaccaccacgcctggttaatttttgtatttttagtagaaat-ggggtttcgtcatgttggccaggctggtctcgaactcctgacttcaggtgatccaccagcctcggcctcccaaagtgctggaattacaggtgggagccaccacgcctggccACCGTTCTCTCTTCTTTATCCATACCTTGCCTTGTTCTTCAGGGCTCTGCGTAGGTACCATTTCCTCCAAGAG--------TTATGGAAATAACTCTGACTTCACACAAAGACAGCAC---------tttttttt-----gttgtttttttgagacggagtctcactgtgtagcccaagctggagtgcagtggttcagtctcagctcactgcaaccttcgcctctggggctcaagcgattctctttgctcagcctcccaagtagctgggactagaggcacgcgccaccacacc--gttaa-ttttttgtgtgtttttagaagagatggggtt---tcatgttgccctgggtggtcttgaactcctgagctcaggtgatcgccctgccttgacctcccaaagtgctgggattacaggtgtgagccaccatgcctggccAAG---ACACTTTTCTCATCCCAAAGCACCTGCTAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47812507 601 + 51301725 aggcatgcaccaccacgcctggttaatttttgtatttttagtagaaat-ggggtttcgtcacgttggccaggctggtctcgaactcctgacttcaggtgatccaccagcgtcggcctcccaaagtgctggaattacaggtgtgagccaccacgcctggccaccgTTCTCTCTTCTTTATCCATACTTTGCCTTGTTCTTCAGGGCTCTGCGTAGATACCATTTCCTCCAAGAG---------AGTTTCCATAACTCTGACTTCACACAAAGAcagcac---------ttttttgt---------tttttttgagacggagtctcactgtgtagcccaagctggagtgcagtggttcaatcttagctcactgcaaccttcgcctctggggctcaagcgattctctttgctcagcctcccaagtagctgggactagaggcacgcgccaccatacccagttaa-ttttttgtgtgtttttagaagagatggggtttcatcatgttgccctgggtggtcttgaactcctgagctcaggtgatcgccctgccttggcctcccaaagtgctgggattacaggtgtgagccaccatgcctggccaag---acacTTTTCTCATCCCAAAGCACCTGCTAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528759 619 + 50890351 aggcatgcaccaccacgcctggttaatttttgtatttttagtagaaat-ggggtttcgtcatgttggccaggctggtcttgaactcctgacttcaggtgatccaccagcctcggcctcccaaagtgcgggaattacaggtgtgagccaccgcgcctggccACCGTTCTCTCTCCTTTATCCATACCTTGCCCTGTTCTTCAGGGCTCTGCATAGATACCATTTCCTCCAAGGGAGATACCATTTCCTCCATAACTCTGACTTCACACAAAGACAGCAC---------ttttttttgttttgttttttttttgagacagagtctcactgtgtagcccaagctggagtgcagtggttcaatctcagctcactgcaaccttcgcctctggggctcaagcgattctctttcctcagcctcccaagtagctgggactagaggcacgcgccaccacactcagttaa-ttttttgtgtgtttttagaagagattgggtttcatcatgttgccctgggtggtcttgaactcctgaggtcaggtgatcgccctgccttggcctcccaaagtgctgggattacaggtgtaagccaccatgcctggccAAG---ACACTTTCCTCATCCCAGAGCACCTGCTAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19992903 79 - 122678785 I e calJac3.chr22 45876304 2755 + 49145316 I e rheMac3.chr19 60573517 1283 + 64156825 I a score=375173.000000 s hg38.chr19_GL949747v2_alt 560266 185 + 729520 ttccctgtaacagcacttgaaccctgattcggcatgcatgtccattttcctgcctctaccgtgaactcgtgtgaattga-tctatgtcagatttagtggctgcattcacagctcccgcaactataacggggttctcgggaaatatatatcaaatgagtgaatGTATATAC-GGGGCTGTGGCACAGC s panTro4.chr19 59835345 185 + 63644993 ttccctgtaacagcacttgaaccctgattcggcatgcatgtccattttcctgcctctaccgtgaactcgtgtgaattga-tctatgtcagatttagtggctgcattcacagctcccgcaactataatggggttctcgggaaatatatatcaaattagtgaatGTATATAC-GGGGCTGTGGCACAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56748337 185 + 60714840 ttccctgtaacagcacttgaaccctgatttggcatgcacgtccatcttcctgcctgtactgtgagctcctgtgacttga-tctatgtcagatttagtggctgcgttcacagctcccgcaactataacagggttctcgggaaatatatatcaaatgagtgaatGTATATAT-GGGGCTGTGGCACAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103285447 181 - 106955855 ttccctgtaacagcacttgaaccctgattcg----gcacatccattttcctgcctctactgtgaactcgtgtgaattga-tctatgtcagatctagtggctgcgttcacagctcccgcaactataacagggttctcgggaaatacatatcaaatgagtgaatGTATATAC-GGGGCTGTGGCACAGC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55700517 186 + 59248254 TTCCTTGTAACAGCACCTGAACCCTGATTCGGCATGCATGTCCATTTTCCTGTCTCCGCCGTGAACGCGTGTGAATTGA-TCTATGTCAGATTTAGTGGCTGCGTTCACAGCTCCGGCAACTCTAAAGGGGTTCTCAGGAAATATATGTCAAATGAAGGAATGTATATACGGGGGCTGTGGCACAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47813108 186 + 51301725 TTCCTTGTAACAGCACCTGAACCCTGATTCGGCATGCATGTCCATTTTCCTGTCTCCGCCGTGAACTCGTGTGAACTGA-TCTATGTCAGATTTAGTGGCTGCGTTCACAGCTCCGGCAACTCTAAAGGGGTTCTCAGGAAATATATGTCAAATGAAGGAATGTATATACGGGGGCTGTGGCACAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47529378 186 + 50890351 TTCCTTGTAACAGCACCTGAACCCTGATTCGGCATGCATGTCCATTTTCCTGTCCCCGCTGTGAACTCATGTGAATTGA-TCTATGTCAGATTTAGTGGCTGCGTTCACAGCTCTGGCAACTCTAAAGGGGTTCTCAGGAAATATATGTCAAATGAAGGAATGTATATACGGGGGCTGTGGCACAGC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19992982 184 - 122678785 TCCCCTATAACAGCACAGGGGCTCTAACACTGCATACATATCCATTTTCCTGACTCTACAGTGAACTTGTGTGAATTTAGCCCATGTGGTGTCTGGTGGCTGTGCTCACAGCTCTTGCCAC--TAAGAAAGTCCCCCAGAAATATACGTCAGGTCAATGAGTATATAAAT-GAGGCTGTAGCACAGC i canFam3.chr1 I 79 I 150 e calJac3.chr22 45876304 2755 + 49145316 I e rheMac3.chr19 60573517 1283 + 64156825 I a score=370166.000000 s hg38.chr19_GL949747v2_alt 560451 192 + 729520 CTGCA---------------------------------------ACTTGAGACTTCTCACTAGGGGTCTTGAAATGCTGTCTGGACACCACCATCGCTTTCCTCCCTGAGAACTTCTACT-TATCAACCCATTTATATACTCATCGCATGGGTCCTCACGCCCTCCCATTATTCTGGTGCCTCATGCCGGTCAAATTTATTCTCTAAATCTGATTTTTCCATTAAATAGcag s panTro4.chr19 59835530 189 + 63644993 CTGCA---------------------------------------ACTTGAGACTTCTCACTAGGGGTCTTGAAATGCTGTCTGGACACCACCATCGCTTTCCTCCCTGAGAA---CTACT-TATCAACCCATTTATATACTCATCGCATGGGTCCTCACGCCCTCCCATTATTCTGGTGCCTCATGCCAGTCAAATTTATTCTCTAAATCTGATTTTTCCATTAAATAGcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56748522 192 + 60714840 CTGCA---------------------------------------ACTTGAGACTTCTCACTAGGGGTCTTGAAATGCTGTCTGGACACCACCACCGCTTTCCTCCCTGAGAACTTCTACT-TATCAACCCATTTATATACTCATTGCATGGGTCCTCACGCCCTCCCATTATTCTGGTGCCTCATGCCAGTCAAATTTATTCTCTAAATCTGATTTTTCCGTTAAATatcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103285628 177 - 106955855 CTGCA---------------------------------------ACT-------------TATGGGTCTTGAAATGCTGTCTGGACACCACCATCGCTTTCCTCCCTGAGAACTTCTACT-TATCAACCCATTTATGTACTCATCGCATGGGTCCTCACGCCCTCCCATTATTCTGGTGCCTCATGCCAGTCAAATTTATTCTCTAA--CTGATTTTTCTGTTAAATatcag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55700703 191 + 59248254 CTGCA---------------------------------------ACTTGAGACTTCTCACTAGGGGCCTTTAAATGCTGTCTGGACACCACCATCGCTTTCCTCCCTGAGAACTTCTACT-TATCAACCCATTTACATACTCACCACATGGG-CCCCACACCCTCCCATTATTCTGGTGCCTCATGCCAGTCAAATTTATTCTCTAAATCTGATTTTTCCGTTAAATatcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47813294 191 + 51301725 CTGCA---------------------------------------ACTTGAGACTTCTCACTAGGGGCCTTTAAATGCTGTCTGGACACCACCATCGCTTTCCTCCCTGAGAACTTCTACT-TATCAACCCATTTACATACTCACCACATGGG-CCCCACACCCTCCCGTTATTCTGGTGCCTCATGCCGGTCAAATTTATTCTCTAAATCTGATTTTTCCGTTAAATATCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47529564 191 + 50890351 CTGCA---------------------------------------ACTTGAGACTTCTCACTAGGGGCCTTTAAATGCTGTCTGGACACCACCATCACTTTCCTCCCTGAGAACTTCTACT-TATCAACCCATTTACATACTCATCACATGGG-CCCCACACCCTCCCACTATTCTGGTGCCTCATGCCAGTCAAATTTATTCTCTAAATCTGATTTTTCCGTTAAATatcaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19993316 223 - 122678785 ctgcaggcagacactcaaccactgagccatccaggtgccccAGCACCTGAGACTCCTGATTATGGTCCTTAAAATGCTGTCTGGACC---------CTTTGTTCCTTACAAATTTTTATTCTATCAACCCATTAATATAACCATTATAGGGGTCCCTTCCCCCCACCAGTAATCTGACACCCCACATGGCTGAAACCCATTCTTTAAATCTGAGCTTTATGTTATATATCAG i canFam3.chr1 I 150 I 8686 e calJac3.chr22 45876304 2755 + 49145316 I e rheMac3.chr19 60573517 1283 + 64156825 I a score=345796.000000 s hg38.chr19_GL949747v2_alt 560643 204 + 729520 cctggccaacacggtaaaaccccatctctactaaaaaatacaaaatattagccaggcgcagtggcttgcacccgtaatctcagctactcgggaggctgaggcagcagaatcacttgaacccgggaggcagaggttgtggtaagccgagattgcaccactgcactccagcctggtaacagagcgagactccctctcaaaataaat s panTro4.chr19 59835719 204 + 63644993 cctggccaacacggtaaaaccccatctctactaaaaaatacaaaatattagccaggcgcagtggcttgcacccgtaatctcagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgtggtaagccgagattgcaccactgcactccagcctggtaacagagcgagactccctctcaaaataaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56748714 204 + 60714840 cctggccaacacggtaaaaccccatctctactaaaaagtacaaaatattagccaggcgcagtggctcgcacccctaatctcagctacttgggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgtggtgagccgagattgcgccactgcactccagcctggtaacagagtgagactccgtctcaaaataaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103285805 204 - 106955855 cctggccaacacagtaaaaccccatctctactaaaaaatacaaaatattagccaggcgcagtggctcgcacccgtaatctcagctacttgggaggctgaggcaggagaatcacttgaacccgggaggcagggggggtggtgagccgagattgcgccactgcactccagcctggtaacagagcgagactccgtctcaaaataaat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55700894 202 + 59248254 cctgg-caacacgatgaaaccccgtctctactaaaaa-tacaacatattagccgggcgcagtgtctcgcacccgtaatctcagctactcgggaggctgaggcagaagaatcgcttgaacctgggaggtggaggttgcagtgagccgagctcacgccactgcactccagcctggtaacagagcgagactccatctctaaataaat i macFas5.chr19 C 0 I 16 s papAnu2.chr19 47813485 202 + 51301725 CCtgg-caacacgatgaaaccccgtctctactaaaaa-tacaacatattagccaggcgcagtgtctcgcacccgtaatctcagctactcgggatgctgaggcagaagaatcgcttgaacctgggagttggaggttgtggtgagccgagatcacgccactgcactccagcctggtaacagagcgagactccatctctaaataaat i papAnu2.chr19 C 0 I 16 s chlSab2.chr6 47529755 202 + 50890351 cctgg-caacacaatgaaaccccgtctctactaaaaa-tacaacatattagccgggcgcagtgtctcgcacccataatctcagcaactaaggaggctgaggcaggagaaccgcttgaacccgggaggtggaggttgcggtgagccaagatcacgccactgcactccagcctggtaacagagcgagactccgtctctaaataaac i chlSab2.chr6 C 0 I 4 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45876304 2755 + 49145316 I e rheMac3.chr19 60573517 1283 + 64156825 I a score=344433.000000 s hg38.chr19_GL949747v2_alt 560847 142 + 729520 aaaCTGCTGACTCGCGTATTTTTTCTTTACCCCAACTCATTCCTTACATGTAGgcacctgtaatcctagctactcagaaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcggtgagccaaaatcgtgcc s panTro4.chr19 59835923 142 + 63644993 aaaCTGCTGACTTGCGTATTTTTTCTTTACCCCAACTCATTCCTTACATGTAGgcacctgtaatcccagctactcagaaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcggtgagccaagatcgtgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56748918 142 + 60714840 aaaCTGCTGACTTGCGTATTTTTTCTTTACCCCAACTCATTCCTTATATGTAAgcacctgtaatcccagctactcacaagggtgaggcaggagaatggcttgaacctgggaggcggaggttgcggtgagccgagatcgtgcc i ponAbe2.chr19 C 0 I 2137 s nomLeu3.chr10 103286009 142 - 106955855 aaaCTGCTGACTTGCGTATTTTTTCTTTACCCTAACTCATTCCTTACATGTAGgcacctgtaatcccagctactcagaaggctgacgcaggagaatcgcttgaagctgggaggcggaggttgcggtgagccgagatcgtgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60574800 142 + 64156825 AAACTGCTGACTTGCATATTTTTTCTTTACCCCAACTCATTCCTTACATGTAGAcacctgtcatcccagctactcagaaggctgaggcaggagaatcgcttgaacctgggaggtggaggtcgcggtgagctgagatcgcacc i rheMac3.chr19 I 1283 C 0 s macFas5.chr19 55701112 142 + 59248254 aaaCTGCTGACTTGCATATTTTTTCTTTACCCCAACTCATTCCTTACATGTAGAcacctgtcatcccagctactcagaaggctgaggcaggagaatcgcttgaacctgggaggtggaggtcgcagtgagctgagatcgcgcc i macFas5.chr19 I 16 C 0 s papAnu2.chr19 47813703 142 + 51301725 aaactgctgacttgcatattttttctttacccCAACTCATTCCTTACATGTagacacctgtcatcccagctactcagaaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcggtgagctgagatcgcgcc i papAnu2.chr19 I 16 C 0 s chlSab2.chr6 47529961 142 + 50890351 aaaCTGCTGACTTGCATATTTTTTCTTTACCCCAACTCATTCCTTACATGTAGAcacctgtcatcccagctactcagaaggctgaggcaggagaatcacttgcacctgggaggcggaggtcgcagtaagctgagatcgcgcc i chlSab2.chr6 I 4 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45876304 2755 + 49145316 I a score=264156.000000 s hg38.chr19_GL949747v2_alt 560989 172 + 729520 actgcactccagcctgggcgacagagcgagactccatctc--aaaaaaaaaaaaaaaaaaaCCACATAGGCTCAGTCTTTTCAGTATCTGCTTTACTGGTTCAGTAAAAGCCAGGAAACACAACTTTGTGGTAATC------------------------------TGAATGTTATTGAACTGTATTTTGTTCACTTTATTGTA s panTro4.chr19 59836065 171 + 63644993 actgcactccagcctgggcgacagagcgagactccatctc---aaaaaaaaaaaaaaaaaaCCACATAGGCTCAGTCTTTTCAGTATCTGCTTTACTGGTTCAGTAAAAGCCAGGAAACACAACTTTGTGGTAATC------------------------------TGAATGTTATTGAACTGTATTTTGTTCACTTTATTGTA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103286151 174 - 106955855 actgcactccagcctgggcgacagagcgagactccatctcgaaaacaaaacaaaaaaaaaaCCACATAGGCTCAATCTTTTCAGTATCTGCTTTACTGGTTCAGCAAAAGCCAGGAAACATGACTTTGTGGTAATC------------------------------CGAATGCTATTCAACTGTATTTTATTTACTTTATTGTA i nomLeu3.chr10 C 0 I 898 s rheMac3.chr19 60574942 163 + 64156825 acagcactccagcct-ggtgacaaagcgagactccatctc--------aaaaaaaaaaaaa--GTGTAGGCTCAATCTTTTCAGTATTTGTTTTACTGGTTCAGCAAAAGCCAGGAAACACAACTTTGTGGTAATC------------------------------CGAGTGTTATTCAACTGTATATGGTTTACTTTATTGTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55701254 165 + 59248254 actgcactccggcct-ggtgacaaagcgagactccatctc------aaaaaaaaaaaaaaa--GTGTAGGCTGAATCTTTTCAGTATTTGCTTTACTGGTTCAGCAAAAGCCAGGAAACACAACTTTGTGGTAATC------------------------------CGAGTGTTATTCAACTGTATATGGTTTACTTTATTGTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47813845 168 + 51301725 actgcactccggcct-ggtgacaaagtgagactccatctc---aaaaaaaaaaaaaaaaaa--gtgtaggctCAATCTTTTCAGTATTTGCTTTACTGGTTCAGCAAAAGCCAGGAAACACAACTTTGTGGTAATC------------------------------CGAGTGTTATTCAACTGTATATGGTTTACTTTATTGTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47530103 195 + 50890351 actgcactccggcct-ggtgacaaagcgagactctatctc------aaaaaaaaaaaaaaa--GTATAGGCTCAATCTTTTCAGTATTTGCTTTACTGGTTCAGCAAAAGCCAGGAAACACAACTTTGTGGTAATTGTGTTTTTCAACCGTGAGTGTTGTAAGTGGTAAGTGTTATTCAACTGTATATTGTTTACTTTATTGTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45876304 2755 + 49145316 I a score=363111.000000 s hg38.chr19_GL949747v2_alt 561161 342 + 729520 AATACTGGTGAACAGTG---AATAAATGGTTGTATATTCCTAATaagaaaaaaa-aaaaaaaagacccaaagtacagcgagctgatgccgatctcatttcgcagaggtccgcctgctctcccctctccaagagtgtaatcctctgcttaataaacttatgccgctttgctatatgtgtgtatcacacccaattctttgttcgaaacaccaagggcctggaacttcacagctttggctggtaac--GGGGAGCAGGGGTAAAGACATTTAAAAGCTGCT--TGtgttaaccataatcgccatcccat-atatcagacccccagaactaactcatcttataactgaata-----ttgt s panTro4.chr19 59836236 344 + 63644993 AATACTGGTGAACAGTG---AATAAATGGTTGTATATTCCTAATaag-aaaaaa-aaaaaaaagacccaaagtacagcgagctgatgccgatctcatttcacagaggtccgcctgctctcccctctccaagagtgtaatcctatgcttaataaacttatgccgctttgctatatgtgagtatcacacccaattctttgttcgaaacaccaagggcctggaacttcacagcttcagctggtaacaGGGGGAGCAGGGGTAAAGACATTTAAAAGCTGCT--TGtgttaaccataatcgccatcccgt-atatcagacccccagaaccaactcatcttataactgaata----cttgt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60575105 332 + 64156825 AATACTGGTGAACAGTGGTCAATAAATGGTTGTATATCCCTAATTAG------GAAAAaaaaagacccgaagtacagcaaactgacgccgatctcattttgcagaggtccacctgctctcccctctcc--gagtgtaatcctgtgcttaataaactgctgctgctttgctaggtgtgtgtatcacaacccatgctttgttcacaccaccaaggacccaggacttcacaccttcagctggtaa---------caGGggtaaggacatttaaaacctgct--cgtgttaaccataatcgtcatcgtgtaacattggatccccagaagtaactcatcttataactgaatactgt----- i rheMac3.chr19 C 0 I 62 s macFas5.chr19 55701419 327 + 59248254 AATACTGGTGAACAGTGGTCAATAAATGGTTGTATATCCCTAATTAG------G-AAAaaaaagacccgaagtacagcaaactgacgccgatctcattttgcagaggtccacctgctctcccctctcc--gagtgtaatcctgtgcttaataaactgctgctgctttgctaggtgtgtgtatcacgacccatgctttgttcacaccaccaaggacccaggacttcacaccttcagctggtaa---------caGGGGTAAGGACATTTAAAACCTGCT--CGtgttaaccataatcgtcatcatgtaacattggatccccagaagtaactcatcttataactgaata--------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47814013 323 + 51301725 AATACTGGTGAACA-TGGTCAATAAATGGTTGTATATCcctaattag------g-aaaaaaaagaccCGAAGTACAGCAAACTGACGCCGATCTCATTTTGCAGAGGTCCGCCTGCTCTCCCCTCTCC--GAGTGTAATCCTGTGCTTAATAAA---CTTCTGCTTTGCTAGGTGTGTGTATCACGACCCATGCTTTGTTCACACCACCAAGGACCCAGGACTTCACACCTTCAGCTGGTAA---------CAGGGGTAAGGACATTTAAAACCTGCT--TGTGTTAACCATAATCGCCATCGTGTAACATTGGATCGCCAGAAGTAACTCATCTTATaactgaata--------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47530298 339 + 50890351 AATACTGGTGAACAGTGGTCAATAAATGGTTGTATATCCCTAATTAG--------AAAaaaaagacccgaagtatagcaaactgacgccgatctcattttgcagaggtccacctgctctcccctctctgagagtgtaatcctgtgcttaataaacttctgctgctttgctaggtgtgtgtatcacgacccatgctttgttcacaccaccaaggacccaggacttcacagcttcagctggtaacaGGGGAAGCAGGGGTAAGGACATTTAAAACCTGCTTGTGtgttaaccgtaatcgccattgtgtaacattgggtccccagaagtaactcatcttataactgaata--------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45876304 2755 + 49145316 I e nomLeu3.chr10 103286325 898 - 106955855 I a score=6246.000000 s hg38.chr19_GL949747v2_alt 561503 56 + 729520 gcttttttttttttttttttttttttttttttttttttttttgagacgaagt----cctg s panTro4.chr19 59836580 39 + 63644993 gc-----------------tttttttttttttttttttttttgagacgaagt----cctg i panTro4.chr19 C 0 C 0 s macFas5.chr19 55701746 24 + 59248254 ----------------------------ctttttttttttttgagatcaagt-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47814336 27 + 51301725 -----------------------------cttttttttttttgagatgaagtctct---- i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 47530637 21 + 50890351 -------------------------------cttttttttttgagacgatgt-------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45876304 2755 + 49145316 I e nomLeu3.chr10 103286325 898 - 106955855 I e rheMac3.chr19 60575437 62 + 64156825 I a score=323676.000000 s hg38.chr19_GL949747v2_alt 561559 257 + 729520 ctctgtcacccaggctggagtgcagtggcgcgatcttgact--ctgcaacctccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaagtgcgtgccaccacgcccggctaatttttgtatttttagtagagacggggtttctccatgttggtctcaaactcctggtctcaggtgatccacccgccttggcctcccaaagtgctgggattacagacgtgagccaccacacccagct s panTro4.chr19 59836619 259 + 63644993 ctctgtcacccaggctggagtgcagtggcgcgatcttgactcactgcaacctccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaagtgcgtgccgccacgcccggctaatttttgtatttttagtagagacggggtttctccatgttggtctcaaattcccgatctcaggtgatccacccgccttggcctcccaaagtgctgggattacagacgtgagccaccacacccagct i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60575499 259 + 64156825 ctctctctctcaggctggagttctgtggcacgatctcagctcactgcaacctctgcctctcgggttcaagcagttctcctgcctcggcctcctcagtagctgggattacaagtgcatgccaccacgcccagctaattttcgtatttttagtagagacagggtttctccatgttggtctcgaactcccgaccccaggtaatccacccaccttggcctcccaaagtgccgggatgacagacaggagccaccacgcccagct i rheMac3.chr19 I 62 C 0 s macFas5.chr19 55701770 259 + 59248254 ctctctctctcaggctggagttctgtggcgcgatctcagctcactgcaacctctgcctctcgggttcaagcagttctcctgcctcggcctcctcagtagctgggattacaagtgcatgccaccacgcccagctaattttcgtatttttagtagagacagggtttctccatgttggtctcgaactcccgaccccaggtaatccacccaccttggcctcccaaagtgccgggatgacagacaggagccaccacgcccagct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47814365 259 + 51301725 ctcactcactcaggctggagttctgtggcgcgatctcagctcactgcaacctctgcctctcgggttcaagcagttctcctgccttggcctcctcagtagctgggattacaagtgcatgccaccacgcccagctaatttttgtatttttagtagagacagggtttctccatgttggtctcgaactcccgaccccaggtaatccacccaccttggcctcccaaagtgctgggatgacagacaggagccagcacgcccagct i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47530658 259 + 50890351 ctctctcactcaggctggagctctgtggcgcgatctcagctcactgcaacctctgcctcctgggttccagcagttctcctgcctcggcctcctcagtagctgggattacaagtgcaagccaccacgcccagctaatttttgtatttttagtagagacagggtttctccatgttggtctcgaactcccgacctcaggtgatccacccacctcggcctcctaaagtgccgggatgacagacaggagccaccacgcccagct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45876304 2755 + 49145316 I e nomLeu3.chr10 103286325 898 - 106955855 I a score=879388.000000 s hg38.chr19_GL949747v2_alt 561816 587 + 729520 acttgtgctttttgaccaacatcttcctctcctaccacccccag-cccctgataacctccacctactctcac----ttctaggagatcaactgttctatttttttttttttttttttttttttt------gagtctcgctctgcacacccaggctggagtgcagtgctgcaatctcggatcactgcaacctccgctttccgggttcaagcgattctcctgcctcagcctccagagtcgctgggattac-----tgagccaccgcgcccagccaGAAGACCCAC-------------------------------------------GCTCCCTAAGACATAACCCACACTGGTGGCCTTTGTtctgacttctcacctgtgctccccacccgctagaaactggcttctctccccacacttcctctgaagctgtctgtgtgaccaacactaatgagcttccttcctggaacatgcagtgacccttttcagcccttctcattattgctcccccacagttgtatttgacacgttgaccacttccttctcgaaggactcacttctctggctttctcggacacttcttgctactcgttttcTGACGGT---TACAGTACCAACAGG-TTTGCAGGCACCTCCACCACCAGAGCCaa s panTro4.chr19 59836878 580 + 63644993 a------ccttttgaccaacatcttcctctcctaccacccccagccccctggtaacctccacctactttcac----ttctaggagatcaactGttcta---ttttttttttttttttttttttt------gagtctcgctctgcacacctaggctggagtgcagtgctgcaatctcggatcactgcaacctccgcttcccgggttcaagcgattctcctgcctcagcctccagagtagctgggattac-----tgagccaccgcgcccagccaGAAGACCCAC-------------------------------------------GctccctaagacataacccacactggcggcctttgttctgacttctcacctgtgctccccacccgctagaaactggcttctctccccacgcttcctctgaagctgtctgtgtgaccaacactaatgagcttccttcctggaacacgcagtgaccctgctcagcccttctcattattgctcccccacagttgtatttgacacgttgaccacttcctcctcgaaggactcacttctctggctttctcggacacttcttgctactcgttttcTGACGGT---TACAGTACCAACAGGTTTTACAGGCGCCTCCACCACCAGAGCCaa i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60575758 593 + 64156825 acttgtgccttttgaccaacatcttcctcccctgccacgcccag-cccctggtaaccgccacctagtcttgc----ttct---aGATCAACCAC---------------tttttttttttttttgagacggagtcgcgctcggcacacccaggctggagtgcagtgctgccatctcggatcactgcaacctccgcttcccgggttcaagcgattctcctgcctcagcctccagagtagctgggattac-----tgagccaccgcgcccagcCAGGAGACCCACTCCCACTGACCCTCACTGGTC-CGTGGCTCT---GGGGGCCACGTTCCCTAAGACATAACCCACACTGGCAGCCTTTGCTCTGACCTCTCACCTGTGGTCCCCACCTGCTGGAAACCGGCTTCTCTGCCCACACTTCCTCTGAAGCTGTGTGTGTGACCAACCCTGATGAG----CTTCCTGGAACA--CAGTGACCCTGCTCAGTCCTTCTCATTATTGCTTCTCCATTGTTGTATTTCACACATTGACCACTTCCTCCTCAAAGGTGTCACCTCGCTGGCCCTCTCGGACACTTCTTGTGACTCGTTTTCTGACAGT-------------------TTTACCGGCACCCCCACCACCAGAGCCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55702029 608 + 59248254 acttgtgccttttgaccaacatcttcctcccctgccacgcccag-cccctggtaaccgccacctagtcttgcttctTTCT---AGATCAACCCCttt----tttttttttttttttttttttttgagacggagtctcgctctgcacacccaggctggagtgcagtgttgccatctcggatcactgcaacctccgcttcccgggttcaagcgattctcctgcctcagcctccagagtagctgggattac-----tgagccaccgcgcccagcCAGGAGACCCACTCCCACTGACCCTCACTGGTC-CGTGGCTCT---GGGGGCCACGTTCCCTAAGACATAACCCACACTGGCAGCCTTTGTTCTGACCTCTCACCTGTGGTCCCCACCTGCTGGAAACCGGCTTCTCTGCCCACACTTCCTCTGAAGCTGTGTGTGTGACCAACCCTGATGAG----CTTCCTGGAACA--CAGTGACCCTGCTCAGTCCTTCTCATTATTGCTTCTCCATTGTTGTATTTCACACATTGACCACTTCCTCCTCAAAGGTGTCACCTCGCTGGCCCTCTCGGACACTTCTTGTGACTCGTTTTCTGACAGT-------------------TTTACCGGCACCCCCACCACCAGAGCCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47814624 615 + 51301725 acttgtgccttttgaccaacatcttcctcccctgccacgcccag-cccctggtaaccgcCACCTAGTCTTGC----TTCTAGGAGATcaaccac---------------tctttttttttttttgagacggagtctcgctctgcacacccaggctggagtgcagtgctgctatctcggatcactgcaacctccgcttcccgggttcaagcgattctcctgcctcagcctccagagtagctgggattac-----tgagccaccgcacccagccaggagaTCCACTCCCACTGACCCTCACTGGTC-CGTGGCTCC--AGGGGGCCATGTTCCCTAAGACATAACCCACACTGGCAGCCTTTGTTCTGACCTCTCACATGTGGTCCCCACCTGCTGGAAACCAGCTTCTCTACCCACACTTCCTCTGAAGCTGTGTGTGTGACCAACCCTGATGAG----CTTCCTGGAACA--CAGTGACCCTGCTCAGTCCTTCTCATTATTGCTTCTCCATTGTTGTATTTCACACGTTGACCACTTCCTCCTCAAAGGTGTCACCTCGCTGGCCCTCTCGGACACTTCTTGCGACTCGTTTTCTGACAGTTTTACCAGCACCAACAGG-TTTACCGGCACCCCCACCGCCAGAGccag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47530917 604 + 50890351 acttgtgccttttgaccaacatcttcctctcctgccacgcccag-cccctggtaaccgccacctagtcttgc----ttct---aGATCAACCAt-------------------tctttttttttgagatggagtctcgctctgcacgcccaggctggagtgcagtgctgcaatctcagatcactgcaacctctgcttcccgggttcaagcaattctcctgcctcagcctccagagtagctgggattac-----tgagccaccgtgcccagcCAGGAGACCCACTCCCACTGACCCTCACTAGTCACGT---TCT----GGGTCCACGTTCCCTAAGACATAACCCACACTGGCAGCCTTTGTTCTGACCTCTCACATGTGGTCCCCACCCGATGGAAACCGGCTTCTCTGCCCACACTTCCTCTGAAGCTGTGTGTGTGACCAACCCTGATGAG----CTTCCTGGAACA--CAGTGACCCTGCTCAGTCCTTCTCATTATTGCTTCTCCATTGTCGTATTTCACACGTTGACCACTTCCTCCTCAAAGGTGTCACCTCGCTGGCCTTCTCGGACACTTCTTGCGACTCGTTTTCTGACAGTTTTACCAGCACCAACAGG-TTTACCGGCACCCCCACCGCCAGAGCCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45879059 613 + 49145316 acttctgcccattgaccaacatctcactccct--cctgccccag--cccggggaacctctacctactctcac----ttctaggagatcaacc-----------------ttCCTCttttttttttaga--gggtctcactctgcacacccagcctggagtgcagtggcgcaatctcagctcactgcaacctccacttcccaggttgaagcgattctcctgcctcagcctccagagtaattgggattacaggcgtgagccaccgcgcccagcCAGAAGACCCACTCCCAGTGGCCCTCACTGGCC-CATGGCTCTGGGGGGGCCCGCGTTCCCTAAGGCATAACTCACACAGGCAGCCTTTGTTCTGACCTGTTGCGTGTGCTCCCCACCCGCTGGAAACTGGCCCCTCTCCCCACACCTGCTCTGAAGCTGTCTGTGTGACCAACGCTAATGAG----CTTCCTGGAACACACAGTGA-CCTGCTCAGCCGTTCTGATGACTGCTCCTCCACACTTGTATTTGACACATTGACCACTTCCTCCTCAAAGGAGTCAGTTCTCTGGTTCTCTCGGACACTTCCTGCTAGTCGTCTTCTGACGGT---TACAGCATGCACAGG-CTTACGGACGCCTCCAACACCAGAGCCGA i calJac3.chr22 I 2755 I 8977 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e nomLeu3.chr10 103286325 898 - 106955855 I a score=127565.000000 s hg38.chr19_GL949747v2_alt 562403 107 + 729520 tcccagctactcgggaggctgaggcaggagaatcgttcaaacccgggaggcagaggttgcagtgagtcgagattgcgccactgcactccagcctgagtgacagactg s panTro4.chr19 59837458 107 + 63644993 tcccagctactcgggaggctgaggcaggagaatcgttcaaacccgggaggcagaggttgcagtgagtcgagattgcgccactgcattccagcctgagtgacagactg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60576351 101 + 64156825 tcccagctactcgggaggctgaggcaggagaatcgctggaacccgggaggcagaggttgcaatgaaccgagattgtg------ctctccagcctgggtgacagactg i rheMac3.chr19 C 0 I 548 s macFas5.chr19 55702637 101 + 59248254 tcccagctacgcgggaggctgaggcaggagaatcgctggaacccgggaggcagaggttgcaatgaaccgagatcgtg------ctctccagcctgggtgacagactg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47815239 107 + 51301725 tcccagctacgcgggaggctgaggcaggagaatcactggaacccgggaggcagaggttgcaatgaaccgagatcgtgccactactctccagcctgggtgacagactg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47531521 107 + 50890351 tcccagctacacgggaggctgaggcaagagaatcgctggaacccgggaggcagaggttgcaatgaaccgagatcgtgccactactctccagactgggtgacagactg i chlSab2.chr6 C 0 I 518 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e nomLeu3.chr10 103286325 898 - 106955855 I a score=11690.000000 s hg38.chr19_GL949747v2_alt 562510 50 + 729520 tga---ctcctcaaaaaaaaacaaaaacaaaaacaaaaaaaCTACagtcttgc s panTro4.chr19 59837565 48 + 63644993 tga---ctcctcaaatacaa--aaaaacaaaaacaaaaaaaCTACagtcttgc i panTro4.chr19 C 0 C 0 s macFas5.chr19 55702738 41 + 59248254 agagtcctcctcaaaattaa--aaaaat----------aaaTTACAGTCTCGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47815346 41 + 51301725 agagtcctcctcaaaattaa--aaaaat----------aaattacagtctcgc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e nomLeu3.chr10 103286325 898 - 106955855 I e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=20405.000000 s hg38.chr19_GL949747v2_alt 562560 29 + 729520 tctgtcgcccaggatgga----atgcagtggtg s panTro4.chr19 59837613 29 + 63644993 tctgtcgcccaggatgga----atgcagtggtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103287223 29 - 106955855 tttgtcactcagggtgga----atgcagtggtg i nomLeu3.chr10 I 898 C 0 s macFas5.chr19 55702779 33 + 59248254 TGTGTCAACCAGGATGGAATGCATGCAGTGgtg i macFas5.chr19 C 0 N 0 s papAnu2.chr19 47815387 33 + 51301725 tgtgttgcccaggatggaatgcatgCAGTGGTG i papAnu2.chr19 C 0 N 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=58955.000000 s hg38.chr19_GL949747v2_alt 562589 322 + 729520 ccatcttggctcactgcaacctctgcctgctggggtctagcgattctcctgcctcagccccccaaggagctgggactacaggcatgtgccgccacgcctggctaatttttgtatttttagtggagatgggggttttaccatgttagccaggttggtcttgaactcctgacctcatgtgatccgcccaccttggcctcccaaagtgcgaggattacag------gcccccgcacccagccTAGGATCCTGCACCTCTCTAGCCTagcagttctctgctgggtgattttgctctcca-----ctccagggg--acatttggcaatgcccatggtaat s panTro4.chr19 59837642 322 + 63644993 ccatcttggctcactgcaacctctgcctgctggggtctagcgattctcctgcctcagccccccaaggagctgggactacaggcatgtgccgccacgcctggctaatttttgtatttttagtggagacgggggttttaccatgttagccaggttggtcttgaactcctgacctcatgtgatccgcccaccttggcctcccaaagtgctaggattacag------gcccccgcacccagccTAGGATCCTGCACCTCTCTAGCCTagcagttctctgctgggtgattttgctctcca-----ctccagggg--gtatttggtaatgcccatggtaat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103287252 313 - 106955855 cagtcttggctcactgccacctccacctccagggttctagtgattctcctgcctcagcctcctgaatagctgggattacaggcatgcaccaccacgcccggctaatttttgtatttttagtagaaat-ggggtttcacaatgttggccagactggtcttgaactcctgacctcaggtgatccaccagcctcggcctcccaaagtgctgggattacaggtgtgagtcaccgtgcccggcc-ACCATCTT-CTCCTCTTTATCC-----GCACTTTGC--------CTTGTTCTTCAGGGCTCTGCAGAGGTATCATT------TCCTCCAAGAGAG i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=132624.000000 s hg38.chr19_GL949747v2_alt 562911 238 + 729520 ttttaattgtcatgacttgg-ggaggggttctactggcatctggtaggtagggtccaggggtgctgctcagcttcctacaatgcccag-ggcagccccagatggcag----------------------cagcaccaaggctgagaaacactgGCTCATGC------------AGAAAGC---AACCACCTTACACCCTTCAGTGCAGGGACAAAGGCAGGGTTACGAGTCCACGGAAACTCTCCAGTCTCAGCCTA-CGTAAGACGTGGCTATTTTT s panTro4.chr19 59837964 238 + 63644993 ttttaattgtcatgacttgg-ggaggggctctactggcatctggtaggtagggtccaggggtgctgctcagcttcctacaatgcccag-ggcagccccagatggcag----------------------cagcaccaaggctgagaaacactgGCTCATGC------------AGAAAGC---AACCAGCTTACCCCCTTCAGTGCAGGGACAAAGGCAGGGTTTTGAGTCCACGGAAACTCTCCAGTCTCAGCCTA-CGTAAGACGTGGCTATTTTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103287565 238 - 106955855 CTTCCACAGCTCCGACTTgg-gaaggggctctaccggcatctagtaggtagggtccaggaatgctgctcagcttcctacaatgcccag-ggcagccccAGATGGCAG----------------------CAGCCCCAAGGCTGAGAAACACTGGCTCATCC------------AGAAAGC---AACCACCTTACACACTTCAGTGTAGGGACAAAGGCAGGGTTATGAGTCCACGGAAACTCTCCAGTCTCAGCCTA-CGTAAGACGTGGCTATTTTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55902572 276 + 59248254 tctttgttgtcataacctggcgcagggg--ctagtggcatcggctgggtagaggccagggaggcggctccacacccagcagcgctcagcagctgccccacaaggagaaggatctgccccaaaatgtggctagcgcccaggctgagaaaccctCACTCAAGACAATTTTCTGCGAGAAAACAATAACCACTTTAAACCATTCAATTTGAGGGCAAAGGCAGGGTTCCAAGTCCAAGGGCACTCTCCAAGCTCAGCTTAGGGTAGGACGTGTCTATTTTT i macFas5.chr19 N 0 N 0 s papAnu2.chr19 47991677 275 + 51301725 TTTTTGTTGTCATAACCTGGCGCAGGGG--CTAGTGGCATCGgctgggtggaggccagggaggcGGCTCCACACCCAGCAGCGCTCAGCAGCTGCCCCACAAGGAAAAGGATCGGCCCCAAAATGTGGCTAGCGCCCAGGCTGAGAAACCCTCACTCAAGA-AATTTTCTGCGAGAAAACAATAACCACCTTAAACCATTCAATTTGAGGGCAAAGGCAGGGTTCCAAGTCCAAGGGCACTCTCCAAGCTCAGCTTAGGGTAGGACATGTCTATTTTT i papAnu2.chr19 N 0 N 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=299668.000000 s hg38.chr19_GL949747v2_alt 563149 1191 + 729520 Ctttcttattgtttttattcatttatttttcttgagacagagtcttgctctgtcgcccaggctggactgcagtggcgcgatctctgctcactgcaagctccgcctcccgggatcacaccattctc---------------------ctgggactacaggcgcccgccacctagcccggctaattttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgat---ctgacctcgtgatcctcccgcctcggcctctcaaagtgctgggattacaggtgtaagccaccgcacccggccTTATTCATTTATTTTTTGAGATAGAGTCTGAGCCCtttattttatttatttagagaccaagtctcgctctgttacccaggctggagtgcagtgtcgtggcctcagctcactgcaacaacctccgcctcccgggttcaagcgattctcccaccttggcctcccaaagtgctggcattacagacacccactaccatgcctggctaattttttgtacttttagtaagtaaagacagggtttcaccatcttggtcaggatggtctcgaactcctggcctcaagtgatcggcccgcctgggtctcccaaagtgatgagattacaggcgtgagcgaccacacTGGcctaatgtgtagttttttatctgtggcctcccttctgccctcccccttctgagactctgaagcccattacatcactctgcctttgtgtaccaacagcttagctcccactgagaacatacagagccaggcacggtggcggtggctcacgcctgtaatcccatcactttgggggtgctgaggcaggtgtatcgcctgaggccaggagttcaagaccagtctggccaacatggtgaaaccccatctctactaaaaatagaaaaatacatagctgggtgtggtggcacgtgcctataatcccagctactagggaggctgaggttggagaatcgcttgaacccaggaggcggaggttgcggtgagccaagatcacaccattgcactctagcctgggcaacaagagcaaaactgtcttaaaaaaaaaaaaaaaaagtgagaacatatggattctactcctgttagaataatggcctccagctccatccaaattgctggaaatgacattatttcattccttctaatggctgaatagtattccatggtacatagacaccacgttttcttt s panTro4.chr19 59838202 1178 + 63644993 Ctttcttattgtttttattcatttatttttctcgagac--agtcttgctctgtcgcccaggctggactgcagtggcgcgatctcggctcactgcaagctccgcctcccgggatcacgccattctc---------------------ctgggactacaggcgcccgccacctagcccggctaattttttgtatttttaatagagacggggtttcaccatgttagccaggatggtctcgat---ctgacctcgtgatcctcccgcctcagcctctcaaagtgctgggattacaggtgtaagccaccgcacccggccTTATTCATTTATTTTTTGAGACAGAGTCTGAGCCC-----tttatttatttagagaccaagtctcgctctgttacccaggctggagtgcagtgtcgtggcctcagctcactgcaacaacctctgcctcccgggttcaagcaattctcccgccttggcctcccaaagtgctggcattacagacacccactaccatgcctggctaattttttgtacttttagtaagtaaagacagggtttcaccatcttggtcaggatggtctcgaactcctggcctcaagtgatcggcccgcctgggtctcccaaagtgatgagattacaggcgtgagcgaccacacTGGcctaatgtgtagttttttatctgtggcctcccttctgccctcccccttctgagactctgaagcccattacatcactctgcctttgtgtaccaacagcttagctcccactgagaacatacagagccaggtacggtggcggtggctcactcctgtaatcccagcactttgggggtgctgaggcaggtgtatcgcctgaggccaggagttcaagaccagtctggccaacatggtgaaaccccatctctactaaaaatagaaaaatacatagctgggtttggtggctggtgcctataatcccagctactagggaggctgaggttggagaatcgcttgaacccaggaggcggaggttgcggtgagccaagatcacaccattgcactctagcctgggcaacaagagcaaaactgtctt---aaaaaaaaaaaaaagtgagaacatatggattctactcccattagaataatggcctccagctccatccaaattgctggaaatgac---atttcattccttctaatggctgaatagtattccatggtacatagacaccacgttttcttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103287803 1186 - 106955855 Cttttttattgtatttattcatttattttttttgagacagagtctcgct-tgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcccggattcacgccattctcctgcctcagcctccccagtagctgggactataggcgcccgccaccacgcccggctaattttttgtagttttagtagagacggggtttcaccgtattagccaggatggtctcaatctcctgacctcgtgatcctcctgcctcggcctcccaaagtgctgggattacaggcatgagccaccgcgcccggccTTATTCATTTATTTTTTGAGACAGAGTCTGAGCCAtttattttatttatttagagaccaagtctcgctctgttacccaggctggagtgcagtgtcgtggcctcagctcactgtaacaacttccgcctccccggttcaagcgattctcctgccttggcctcccaaagtgctgggattacagacacccactaccatgcccagctaattttttgtgtttttagtaagtaaagacagggtttccccatcttggtcaggctggtctcaaactcctggcctcaagtgagccacccgcctcggtctcccaaagtgatgggattacaggcatgcgcgaccacacTGGcctaatgtgtagttttttatctgtggcctcccttccgccctcccccttctgagcctttgaagcccattacatcactctgcctttgtgtaccaacagcttagctcccactgagaacatacagagccaggcacggtggcggtggctcacgcctgtaatcccagcactttgggggtgctgaggcaggtgcatcacctgaggccaggagttcaagaccagtctggccaacatggtgaaaccccatctctaatgaaaatagaaaaatacatagctgggcgtggtggca------------------------ggaggctgaggttggtgaatcgcttgaacccaggaggcagaggttgcggtgagccaagatcacaccactgcactccagcctgggcaacaagagcgaaactgtctt----aaaaaaaaaaaaagtgagaacatatggattctactcctgttagaataatggcctccagctgcatccaagttgctggaaatgacattatttcattccttctaatggctgaataggattccatggtatatagacaccacgttttcctt i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=92396.000000 s hg38.chr19_GL949747v2_alt 564340 1031 + 729520 atccactgtagggaccagccccacagggtcggtgggtctctccctgtgtgcggcgacgagagagtgtagaaatcaagacacaagacaaagagacaagagaaaaggcagctgcgcccgggggaccactaccaccaatgcgcggagaccggtagtggccccgaatgtctggctgcgctgttatttattggatacaaggcagaaggggcagggtaaagagtgtgagtcacctccaatgataggtaaggtcacgtgggtcacgtgtccactggacagggggcccttccctgcctggcagccgaggc--agagagagagaggagacagagagaaagacagcttatgccattatttctgcatatcagggactattagtactttccctaatttactactgctatctagaaggcagagccaggtgtacaggatggaacatgaaggcggactaggagcgtgaccaccgaagcacagcatcacagggagacggttaggcctccggataactgcgggcgagcctgactgatgtcaggccctccacaagaggtggaggagcagagtcttctctaaactcccccggggaaagggagacccc-cccccccacccgctgcccctttcccggtctgctaagtagcgggtgttgttaattgacaccttttgctaccgctggaccatgatccgcttggtgacgggtgtcttcccagacgctggcgtcaccgctagaccaaggagccctctggtggccctgtccgggcataacagaaggctcgcactcttgtcttctggtcacacctcactatgtcccctcagctcctatctctgtatggcctggtttttcctaggctatgattatagagtgaggattattataatattggaataaaaagtaattgctaccagctaatgattaatgatactcatatataatcatatctaagatctatatctggtataacaattcttgttttatattttattatactggaacagctcgtgtcctctgtctcttgcctcggtgcctgggtgccttgccgcccaca s panTro4.chr19 59839380 1025 + 63644993 atccactgtagggaccagccccacagggttggtaggtctctccctgtgtgcggcgacgagagagtgtagaaataaagacacaagacaaagagacaagagaaaaggcagctgggcccgggggaccactaccaccaatgcgcggagaccggtagtggccccgaatgtctggctgcgctgttatttattggatacaaggcagaaggggcagggtaaagagtgtgagtcacctccattgataggtaa---------ggtcacgtgtccactggacagggggcccttccctgcctggcagccgaggcagagagagagagaggagacagagagagagacagcttacgccattatttctgcatatcagggactattagtactttcactaatttaccactgctatctagaaggcagagccaggtgtacaggatggaacatgaaggcggactaggagcgtgaccaccgaagcacagcatcacagggagacggttaggcctccggataactgcgggcaggtctgactgatgtcaggccctccacaagaggtggaggagcagagtcttctctaacctcccccggggaaagggagaccccacccacccacccaccgcccctttcccggtctgctaagtagcgggtgttgttaattgacaccttttgctaccactggaccatgatccgcttggtgacgggtgtcttcccagacgctggcgtcaccgctagaccaaggagccctctggtggccgtgtccgggcataacagaaggctcgcactcttgtcttctggtcacacctcactatgtcccctcagctcctatctctgtatggcctggtttttcctaggctatgattatagagtgaggattattataatattggaataaaaagtaattgctaccaactaatgattaatgatactcatatataatcacatctaagatctatatctggtataactattcttgttttatattttattatactggaacagctcgtgtcctctgtctcttgcctcggcacctgggtggcttgccgcccaca i panTro4.chr19 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e nomLeu3.chr10 103288989 0 - 106955855 C e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=32747.000000 s hg38.chr19_GL949747v2_alt 565371 61 + 729520 atccactcattattcaatgggcacttcggttggttccacatctttgcaattgtgaatGGCT s panTro4.chr19 59840405 61 + 63644993 atccactcattattcaatgggcacttcggttggttccacatctttgcaattgtgaatGGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56751197 61 + 60714840 atccactcattagtcaatgggcactttggttggttccacatctttgcaactgtgaatGGCT i ponAbe2.chr19 I 2137 C 0 s nomLeu3.chr10 103288989 61 - 106955855 atccactcattagtcaatgggcacttcggttggttccacatctttgcaattgtgaatGACT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45879672 8977 + 49145316 I e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=652268.000000 s hg38.chr19_GL949747v2_alt 565432 293 + 729520 GAGCcagccattcttaactgggggtgattttgtccccatgggggtatctggccacatcccgagagg-ttttttggttgtcacgagttgcagtggggg------caggctcaggctcat-------------ccaagtccaggggtgctgctatacatcacgtgatacacaggacagtccttgc-----------tacggactgaattggtcccaccaaacgtcatgtacaagcccta-ccccagatgtgactctatttggacacagggcttttcagaggtaattaagGCTGGTCAGGCGCC-------------GTAATCACAGCACTTTAGGAGTTC s panTro4.chr19 59840466 293 + 63644993 GAGCcagccattcttaactgggggtgattttgtccccatgggggtatctggccacatcccgagagg-ttttttggttgtcacgagttgcagtggggg------cagcctcagactcat-------------ccaagtccaggggtgctgctatacatcacgtgatacacaggacagtccTtgc-----------tacggactgaattggtcccaccaaacgtcatgtacaagcccta-ccccagatgtgactctatgtggacacagggcttttcagaggtaattaagGCTGGTCAGGCGCC-------------GTAATCACAGCACTTTAGGAGTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56751258 303 + 60714840 GAGCcagccattgttaactgggggtgattttgtccccatggggacatctggccacatcccgaga-g-ctttttggttgtcacgagttgcagtggggg------caggctcaggctcat-------------ccaagtccaggggcgctgctatacatcacgtgatacacaggacagtcctcactacagaCTGAAtacggactgaattggtcccaccaaacttcacgtacaagcccta-ccccagatgtgactctatttggacacagggcttttcagaggtaattaagGCTGGCCAGGTGCC-------------GTAATCACGGCACTTTAGGAGTTC i ponAbe2.chr19 C 0 I 275 s nomLeu3.chr10 103289050 294 - 106955855 GAGCcagccattcttaactgggggtgattttgtccccatgggggcatctggccgcatcccgagaggtttttttggttgtcaggagttgcagtggggg------caggctcaggctcat-------------ccaagtccaggggtgctgctatacatcatgtgataca-aggacagtccTtgc-----------tacggactgaattggtcccaccaaacttcacgtacaagccctagccccagatgtcactatatttggccacagcgcttttcagaggtaattaagGCTGGCCAGGCGCG-------------GTAATCACAGCACTTTAGGAGTTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60577000 325 + 64156825 GAGCcagccattcttaacttggggtgattttgtccccatggggacatctggccatatcccgaga-g-cttttcggttgtcatgagttgcagtgggggcaggttcaggctcaggctcatggtgtctcctgggcaaagtccaggtgtgctgctatgcatcatgtggcacacagcacagtccTtgt-----------cacggtctgaattggtcctgccaaacttcacgtaaaagccctagccccaggtgtgactctatttggacacagggcttttcagaggtaattaaTGCTggccaggcaccgtggctcacgcctgtaatcacagcactttaggagTTC i rheMac3.chr19 I 548 C 0 s macFas5.chr19 55703290 325 + 59248254 GAGCcagccattcttaacttggggtgattttgtccccatggggacatctggccatatcccgaga-g-cttttcggttgtcatgagttgcagtgggggcaggttcaggctcaggctcatggtgtctcctgggcaaagtccaggtgtgctgctatgcatcatgtggcacacagcacagtccTtgt-----------cacggtctgaattggtcccgccaaacttcacgtacaagccctagccccaggtgtgactctatttggacacagggcttttcagaggtaattaaTGCTggccaggcaccgtggctcacgcctgtaatcacagcactttaggagTTC i macFas5.chr19 N 0 C 0 s papAnu2.chr19 47815908 325 + 51301725 gagcCAGCCATTCTTAACTTGGGGTGATTTTGTCCCCATGGGGACATCTGGCCACATCCCGAGA-G-CTTTTCGGTTGTCACGAGTTGCAGTGGGGGCAGGTTCAGGCTCAGGCTCATGGTGTCTCCTGGGCAAAGTCCAGGTGTGCTGCTATGCATCATGTGGCACACAGGACAGTCCTTGT-----------CACGGTCTGAATTGGTCCCGCCAAACTTCACGTACAAGCCCTAGCCCCAGGCGTGATTCTATTTGGACACAGGGCTTTTCAGAGGTAATTAATgctggccaggcaccgtggctcacgcctgtaatcacagcactttaggagttc i papAnu2.chr19 N 0 C 0 s chlSab2.chr6 47532146 317 + 50890351 GAGCcagccattcttaacttggggtgattttatccccatggggacatctggccacatcccaaga-g-cttttcagttgtcacgagttgcagtggggg------caggctcaggctcacggtgtctgctgggcaaagtccaggtgtgctgctctgcaccatgtggcacacaggacagtccTtgt-----------cacggtctcaattggtcccgccaaacttcacgtacaagccctagccccaggtgtga--ctatttggacacagggcttttcagaggtaattaaTGCTggccaggcaccgtggctcacgcctgtaatcacagcactttaggagTTC i chlSab2.chr6 I 518 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45879672 8977 + 49145316 I a score=401729.000000 s hg38.chr19_GL949747v2_alt 565725 175 + 729520 TGTGTTTATTACTGGTAAGTGGGTAAGAgcccagtgtggcagctcacgcgtgtaatcccagcactttgggaagcgaaggcaaggggataactggaggccagcagttcaagacaagcctggtcaatacagcaagactccatctctat--aaaatattttaaaattagccaagcatgtt s panTro4.chr19 59840759 170 + 63644993 TGTGTTTATTACTCGTAAGTGGGTAAGAgcccagtgtggcagctcacgcgtgtaatcccagcactttgggaggcgaaggcaaggggataactggaggccagcagttcaagacaagcctggtcaatacagcaagactccatctct-------atattttaaaattagccaagcatgtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56751836 175 + 60714840 TGTGTTTATTACTCATAAGTGGGTAACagcccagtgtggcagctcacgcgtgtaatcccagcactttgggaggctaaggcaaggggataactggaggccagcagttcaagaccagcctggtcaatacagcaagactccatctctat--aaaatattttaaaattagccaagcatgtt i ponAbe2.chr19 I 275 C 0 s nomLeu3.chr10 103289344 174 - 106955855 TGTGTTTATTA-TCGTAAGTGGGTAAGAgcccagtgtggcagctcacgcgtgtaatcccagcactttgggaggctaaggcaaggggataactggagaccagcagttcaagaccagctgggtcaatacagcgagactccatctctat--aaaatattttggaatgagccaagcatgtt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60577325 175 + 64156825 TGTGTTTATTACTTATAAGTGGGTAAGAgcccagtgtggcagctcacacgtgtaatcccagcacttcgggaggctgaggcaaggggataacttgaggtcaggagttcaagaccagcctggtcaatacagcaagaccccatctctat--aaaacattttaaagttagccaggcatgtt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55703615 175 + 59248254 TGTGTTTATTACTTATAAGTGGGTAAGAgcccagtgtggcagctcacacgtgtaatcccagcacttcgggaggctgaggcaaggggataacttgaggtcaggagttcaagaccagcctggtcaatacagcaagaccccatctctat--aaaacattttaaagttagccaggcatgtt i macFas5.chr19 C 0 I 157 s papAnu2.chr19 47816233 175 + 51301725 TGTGTTTATTACTTATAAGTGGGTAAGAGCCCAGGGTGGcagctcacacgtgtaatcccagcactttgggaggctgaggcaaggggataacttgagatcaggagttcaagaccagcctggtcaatacagcaagaccccatctctgt--aaaacattttaaagttagccaggcatgtt i papAnu2.chr19 C 0 I 157 s chlSab2.chr6 47532463 177 + 50890351 TGTGTTTATTACTTATAAGTGGGTAAGAgcccagtgtggcagctcacacgtgtaatcccagcactttgggaggctgaggcaaggggataacttgagatcaggagttcaagaccagcctggtcaatacagcaaagccccatctctattataaacattttaaagttagccaggcatgtt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45879672 8977 + 49145316 I a score=311275.000000 s hg38.chr19_GL949747v2_alt 565900 233 + 729520 tggcatgcacctgtaatcccagc-------tcaggaggctcaggtgggaggattccttga--------gtttaaggctgcagtgagctaagatcgcaccattgcactccaacccggctgtgggcaacacagcACCACCACCATCTTggctgggcacggtggctcacgcctgtcatgccagcactttgggaggccgaggcggg-tggctcacctgaggtcaggagtttgagactagcctggccaacatgg s panTro4.chr19 59840929 233 + 63644993 tggcatgcacctgtaatcccagc-------tcaggaggctcaggtgggaggattccttga--------gtttaaggctgcagtgagctaagatcgcaccattgcactccgacccggCTGTGAGGAACACAGCACCACCACCATCTTggctgggcacagtggctcatgcctgtcatgccagcactttgggaggccgaggcggg-tggctcacctgaggtcaggagtttgagactagcctggccaacatgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56752011 234 + 60714840 tggcatgcacctgtaatcccagc-------tcaggaggcttaggtgggaggattccttga--------gtttaaggctgcagtgagctaagatcataccattgcactccagcccagctgtgagcaacagagcACCACCACCATCTTggctgggcgtggtggctcacgcctgtcatcccagcactttggaaggccgaggcgggatgggtcacctgaggtcaggagtttgagactagcctggccaacatgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103289518 207 - 106955855 tggcatgcacctgtaatcccagc-------tcagggggctcagctgggaggcctccttga--------gtttaaggctgcagggagctaagatcgcaccatcgcactccaacccggctgtgagcaacagagcACCACCACCATCTTGGCTGGGCGTAGTGGCTCA--------------------------Accaaggcggg-tgggtcacctgaggtcagaagtttgagactagcctggccaacatgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60577500 247 + 64156825 tggcacgcacctgtaatcccagctacttactcaggaggctcaggtgggaggatcgcttga-cccgggagttcaaggctgccatgagctaagattgcaccattgcactccaacctggctgtgagcaacagagcaacaccactatctTgactgggcacagtggctcacgcctgtaatcccaacactttgggaggccgaggcagg-tgggtcacctgaggtcaggagtttgagaccaacctggccaacatgg i rheMac3.chr19 C 0 I 126 s macFas5.chr19 55703947 216 + 59248254 tggctcacgcctgtaatcccaac-act---ttgggaggccgaggcaggtgggtcacctgaggtcaggagtttgagaccaacctg-gccaacatgg------tgaaaccccatct--ctactaaaaacataaaaa----------ttaactgggggtggtagcaggcacacgtaatccca--gatacgggaggctgaggcatg-agaatcacttgaacctgggagatggaggttacagtgagc------- i macFas5.chr19 I 157 C 0 s papAnu2.chr19 47816565 216 + 51301725 tggctcacgcctgtaatcccaac-act---ttgggaggccgaggcaggtgggtcacctgaggtcaggagtttgagaccaacctg-gccaacatgg------tgaaaccccatct--ctactaaaaacataaaaa----------ttaactgggggtGGTAGCAGGCACACGTAATCCCA--gatacgggaggctgaggcatg-agaatcgcttgaacttgggagatggaggttacagtgagc------- i papAnu2.chr19 I 157 C 0 s chlSab2.chr6 47532640 247 + 50890351 tggcacgcacctgtaatcccagctacttactcaggagtctcaggtgggaggatcgcttga-cccgggagttcaaggctgccatgagctaagattgcaccattgcactccaacctggctgtgagcaacagagcaacaccactatctTgactgggcacagtggctcacgcctgtaatcccaacactttgggaggccgaggcagg-tgggtcacctgaggtcaggagtttgagaccaacctggccaacatgg i chlSab2.chr6 C 0 I 128 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45879672 8977 + 49145316 I a score=194977.000000 s hg38.chr19_GL949747v2_alt 566133 105 + 729520 tgaaatcacgccactgcactccagcctaggcaaccaagtgagactctgtcCGCCCCACCACCCCACCAAA--AA---AAAGACTACTATCTTAAACAAAATCAAAATTTT s panTro4.chr19 59841162 102 + 63644993 tgaaatcacgccactgcactccagcctaggcaaccaagtgagactctgtcCGCCCCACCACCCCACCAAA--AA---AAAA---ACTATCTTAAACAAAATCAACATTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56752245 107 + 60714840 tgaaatcAcaccactgcactccagtctaggcaaccgagtcagactctgtcCACCCCACCACCCCACCAAAACAA---AAAAACTACCATCTTAAACAAAATGAAAATTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103289725 105 - 106955855 tgaaatcacgccactgcactccagcctaggcaaccgagtgagactctgtccaccccaccaaaaaaaaaaa--aa---aaaaaCTACCTTCTTAAACAAAATCAAAATTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60577873 107 + 64156825 tgagatcacgccattgcactccagcctgggcagccgagtgagaccctgtcCACCCCACCACCCCACCAAA--AAAATAAAACCTACCATCttaaataaaatcaaaa-ttt i rheMac3.chr19 I 126 C 0 s macFas5.chr19 55704163 94 + 59248254 tgagatcacgccattgcactccagcctg-------------gacCCTGTCCACCCCACCACCCCACCAAA--AAAATAAAACCTACGATCTTAAATAAAATCAAAA-TTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47816781 103 + 51301725 tgagatcacgccattgcactccagcctgggcagccgagtgagaccctgtccaccccaccaccccaccaaa--aaaataaaacctaccatct----taaaatcaaaa-ttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533015 105 + 50890351 tgagatcacaccattgcactccagcctgggcaactgagtgagaccctgtcCACCCCACCACCCCACCAAA--AAA--AAAACCTACTATCTTAAATAAAATCAAAA-TTT i chlSab2.chr6 I 128 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45879672 8977 + 49145316 I a score=1033785.000000 s hg38.chr19_GL949747v2_alt 566238 457 + 729520 TAAGTAGATAAAATATTTAGGGG-AAAAAAACTTCAAT--TAAATATGCAGC--AGAGTCCGACCCAGATGTTTTCACTCCCAGCCTCTACCTACTATCTTTGTGTCTTTATTTTTAGCAAATTCTACACGGGAACTTCATGTGCATGTAGAACCCTAAATGTTGACTCAGCCCTACCTCTCATCACCTGACCACTTCCTTT-ATTCACGC----TGTCTCTACCACCCTTCCCATCGG----------TGTGAGCTGTATCCCGCT-AAACACTGTTACCACCCACAGCC----TGCATTACTACCAGCTGACTGTAGCCTTAAACACCACAGTGATCTCGAGCATTTGAGAAGACTTATCTTGACAAGGGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGAGGGCCTTCATGGGATCATTCAGTG-----CTGAAGCCACTCAACCTCCAGGTTTGGGTTAGTAAAAAGAACTTTGT s panTro4.chr19 59841264 454 + 63644993 TAAGTAGATAAAATATTTAGGGG-AAAAAAACTTCAAT--TAAATATGCAGC--AGAGTCTGACCCAGATGTTTTCACTCCCAGCCTCTACCTACTATCTTTGTGTCTTTATTTTTAGCAAATTCTACACGGGAACTTCATGTGCATGTAGAACCCTAAATGTTGACTCAGCCCTACCTCTCATCACCTGACCACTTCCTTT-ATTCACGC----TGTCTCCACCACCCTTCCCATCGG----------TGTGAGCTGTATCCCGCT-AAACACTGTT---ACCCACAGCC----TGCATTACTACCAGCTGACTGTAGCCCTAAACACCACAGTGATCTCGAGCATTTGAGAAGACTTATCTTGACAAGGGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGAGGGCCTTCATGGGATCATTCAGTG-----CTGAAGCCACTCAACCTCCAGGTTTGGGTTAGTAAAAAGAACTTTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56752352 455 + 60714840 TAAGTAGATAAAATATTTAGGGG-AAAAAAACTTCAAT--TAAATATGCAGC--AGAGTCCGACCCAGATATTTTCACTCCCAGTCTCTACCTACTATCTTTGTGTCTTTATTTTTAGCAAACTCTACACAGGAACTTCATGCGCATGTAGAACCCTAAATGTTGACTCGGCCCCACCTCTCATCACCTGACCACTTCCTTT-ATTCACGC----TGTCTCCACCACCCTTCCCATTGG----------TGTGAGCTGTATCCCACTAAAACACTGTT---ACCCACAGCC----TGCATTACTAGCTGCTGACTGCGGCCCTAAACACCATGGTGATCTCGAGCATTTGAGAAGGCTTATCTTGACAAGGGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGAGGGCCTTCATGGTATCATTCAGTG-----CTGAAGCCACTCAATCTCCAGGTTCGGGTTAGTAAAAAGAACTTTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103289830 454 - 106955855 TAAGTAGATAAAATATTTAGGGG-AAAAAAACTTCAAT--TAAATATGCAGC--AGAGTCCAACCTAGACGTTTTCACTCCCAGCCTCTACCTACTATCTTTGTGTCTTTATTTTTAGCAAATTCTACACAGGAACTTCATGCCCATGCAGAACCCTACATGTTGACTCAGCCCCACCTCTCATCACCTGACCACTTCCTTT-ATTCACGC----TGTCTCCACCACCCTTCCCATTGA----------TGTGAGCTGTATCCCACT-CAACACTGTT---ACCCACAGCC----TGCGTTACCACCAGCTGACTGTAGCCCTAAACAGCACGGCGACCTCGAGCATTGGAGAAGACTTATCTTGACAAGGGCTCACGAAAGACAGCAACGCTCAACAGCAAGATAAATGAGGGCCTTCATGGGATCATTCAGTG-----CCAAAGCCACTCAACCTTCAGGTTTGCGTTAGTAAGAAGAACTTTGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60577980 445 + 64156825 taagtaaataaaatatttaGGGGAAAAAAAACTTC------AAATATGCAGC----AATCTGACCCAAACGTTTTCACTCCCAGCCTCTACCTGCTATCTTTGTGTCTTTATTTTTAGCAAATTCTACACAGGAACCTCACGCCCATGTAGAACCGTAAATGTTGACTCAGCCCCACCTGTCATGCCTGGACCACTTCCTTT-ATTCACGCTCAGTGTCTCCACCACACTTCCCACTGA----------TGTGAACTGTATCCCACT-AAACA--GTT---ACCCGAAGTC----TGCATCACTACCAGCTGACTGTAGCCCTAAACACCATGGCGATCTCGAGCGTTTG---AGATTTATCTTGACAAGGGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGACAGCCTTCATGGTGCCATTCAGTG-----CTGACGCCACTCAACCTCCAGGCTTGGGTTAGT---AAGAACTTTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55704257 448 + 59248254 TAAGTAGATAAAATATTTAGGGGAAAAAAAACTTC------AAATATGCAGC----AATCTGACCCAAACGTTTTCACTCCCAGCCTCTACCTGCTATCTTTGTGTCTTTATTTTTAGCAAATTCTACACAGGAACCTCATGCCCATGTAGAACCGTAAATGTTGACTCAGCCCCACCTGTCATGACTGGACCACTTCCTTT-ATTCACGCTCAGTGTCTCCACCACACTTCCCACTGA----------TGTGAACTGTATCCCACT-AAACA--GTT---ACCCAAAGTC----TGCATCACTACCAGCTAACTGTAGCCCTAAACACCATGGCGATCTCGAGCGTTTGAGAAGATTTATCTTGACAAGGGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGACAGCCTTCATGGTGCCATTCAGTG-----CTGACGCCACTCAACCTCCAGGCTTGGGTTAGT---AAGAACTTTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47816884 447 + 51301725 taagtagataaaatatttagggg-aaaaaaacttc------aaatatgcAGC----AATCTGACCCAAACGTTTTCACTCCCAGCCTCTACCTGCTAtctttgtgtctttatttttagcAAATTCTACACAGGAACCTCATGCCCACATAGAACCGTAAATGTTGACTCAGCCCCACCTGTCATGCCTGGACCACTTCCTTT-ATTCACGCTCAGTGTCTCCACCACACTTCCCACTGA----------TGTGAACTGTATCCCACT-AAACA--GTT---ACCCAAAGTC----TGCATCACTACCAGTTGACTGTAGCCCTAAACACCATGGCGATCTCCAGCGTTTGAGAAGATTTATCTTGACAAGAGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGACAGCCTTCATGGTACCATTCAGTG-----CTGAAGCCACTCAACCTCCAGGCTTGGGTTAGCAAAAAGAActt--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533120 447 + 50890351 TAAGTAGATAAAATATTTAGGGG-AAAAAAACTTC-------AATATGCAGC----AATCTGACCCAGATGTTTTCACTCCCAGCCTCTACCTACTATCTTTATGTCTTTATTTTTAGCAAATTCTACACAGGAACCTCATGCCCATGTAGAACTGTAAATGTTGACTCAGCCCCACCTGTCATGACCGGACCACTTCCTTT-ATTCACGCTCAGTGTCTCCACCACACTTCCCACTGA----------TGTGAACTGTATCCCACT-AAACA--GTT---ACCCAAAGTC----GGCATCACTACCAGCTGACTGTAGCCCTAAACACCATGGCGATCTCGAGCGTTTGAGAAGATCTATCTTGACAAGGGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGACAGCCTTCATGGTGCCATTCAGTG-----CTGAAGCCACTCAACCTCCAGGCTTGGGTTAGTAAAAAGAACC--GT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20002225 441 - 122678785 taaataaataaaaattaaaaaaa-taaaaaaaataaaTACCCAATAATCAACATAGATTCTGACCCAGACGTTCTCAATCATA------ACCCACCATCACTATATTTGTATCTTAAAAAAA------AAAAAAGCTTTGTATTCACGTGGAGAC-----------CTCAGCCTCACCTCCAATATCTTGATCACTTCCTCTAAACCATACTCAATTCCTCCACCACGCATCTCCCTGAAATCCTCCCCTGT---CCACACCCTGGT-AAACCCAGTC---ATCTGAAAGCCTAGTAAGCTGATATCCACTGAGTGGAACACCAAATACTACAGCAGCTATGAGGGCTTGAGCACATTTATCCTGATAAGAG------------GGCAACACCAAATGGTGGAAGAAACCCGGTCCTTCCTGGAACAACCCAGTGGCTAAGTTAAGCCACAGGGTTCCCATCCTTGAG---GTAAGAAGACCCCTAT i canFam3.chr1 I 8686 I 5603 e calJac3.chr22 45879672 8977 + 49145316 I a score=516917.000000 s hg38.chr19_GL949747v2_alt 566695 233 + 729520 CAggccaggcacagtggctcacgcctgtcatcccagcactttgggaggccaaggcgggcagatcacctgaggtcaggagttcaagaccagcctggctaacatggtgaaacctcgtctttactaaaaatac--aaaaattagccaggcatggtgacgcacacctctagtctcagctactccggaggctgggacagaagactcacttgaacccaggaggcagaggttgtagtgagcc s panTro4.chr19 59841718 232 + 63644993 CAggccaggcacagtggctcacgcctgtcatcccagcactttgggaggccaaggcgggcagatcacctgaggtcaggagttcaaaaccagcctggctaacatggtgaaacctcgtctttactaaaaatac--aaaaattagccaggcatggtgacgcacacctctagtctcagctactccagaggctgggacagaagactcac-tgaacccaggaggcagaggttgtagtgagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56752807 233 + 60714840 CAggccaggcgcagtggctcacgcctgtcatcccagcactttgggaggccaaggcgggcagatcacctgaggtcaggagttcaagaccagcctggctaacatggtgaaacctcgtctctactaaaaatac--aaaaattagccaggcatggtggtgcacacctctagtcccagctgctcaagaggctgggacagaagactcacttgaacccaagaggtggaggttgcagtgagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290284 233 - 106955855 CAggccaggcgcagtggctcatgcctgtcatcccagcactttgggaggccaaggcaggcagatcacctgaggtcaggagttcaagaccagcctggctaacatggtgaaacctcgtctctactaaaaatac--aaaaactagccaggcatggtgacgcacacctctagtcccagctactcgagaggctgggacagaagactcacttgaagccaggaggtggaggttgcagtgagcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60578425 234 + 64156825 CAGCccaggcacagtggctcacggctgtcatcccagcactttgggaggccaaggcaggcaggtcacctgaggtcaggagttcgaaaccagcctggttaacacggggaaaccctgtctctattaaaaatacaaaaaaatcagccaggcgtggtggtgtacacctctagtcccagctactcaggaggctggggcagaagactcacttgaacccagcaggtggaggttgcagtgag-c i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55704705 234 + 59248254 CAGCccaggcacagtggctcacggctgtcatcccagcactttgggaggccaaggcaggcaggtcacctgaggtcaggagttcgaaaccagcctggttaacacggggaaaccctgtctctactaaaaatac-aaaaaatcagccaggcgtggtggtgtacacctctagtcccagctactcaggaggctgggacagaagactcacttgaacccaggaggtggaggttgcagtgagcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47817331 201 + 51301725 -------------------------tgtcatcccagcactttgggaggccaaggcaggcaggtcacctgaggtcaggagttcgaaaccagcctggttaacatggggaaaccctgtctctactaaaaatac-aaaaaatcagccaggcgtggtggcgtacacctctagtcccagctactcaggaggctgggacagaagACTCACttgca--------gtggaggttgcagtgagcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533567 234 + 50890351 CAGCccagacacagtggctcacggctgtcgtcccagcactttgggaggccaaggcaggcaggtcacctgaggtcagcagttcaaaaccagcctggttgacacggggaaaccctgtctctactaaaaatac-aaaaaattagccaggcatggtggcatacacctctagtcccagctactcaggaggctgggacagaagactcacttgaacccaggaggtggaggttgcagtgagcc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45879672 8977 + 49145316 I a score=77741.000000 s hg38.chr19_GL949747v2_alt 566928 26 + 729520 aagatcgcaccactgcactccagcct s panTro4.chr19 59841950 26 + 63644993 gagatcgcaccactgcactccagcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753040 26 + 60714840 aagatcgcaccactgcactccagcct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290517 26 - 106955855 aagatcgcaccactgcactccagact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60578659 26 + 64156825 aagatcacaccactgcgctccagcct i rheMac3.chr19 C 0 I 28 s macFas5.chr19 55704939 26 + 59248254 aagatcacaccactgcgctccagcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47817532 26 + 51301725 gagatcacaccactgcgctccagcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533801 26 + 50890351 aagatcacaccactgcgctccagcct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45888649 26 + 49145316 Aagatgatgccactgcgctccagcct i calJac3.chr22 I 8977 C 0 e canFam3.chr1 20002666 5603 - 122678785 I a score=20845.000000 s hg38.chr19_GL949747v2_alt 566954 69 + 729520 gggcgaca--gaggcaagact-ccatctcaaaaaaaaaaaaaaaaaaaaagaaaagaaaACTTTGTCATACA s panTro4.chr19 59841976 61 + 63644993 gggcgaca--gaggcaagact-ccatctcaaaaaaaaaaaaaaaagaa--------aaaaCTTTGTCATACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753066 57 + 60714840 gggcaaca--gaggggagact-ccatctcaagaaaaaaaaaaag------------aaaaCTTTGTCATACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290543 68 - 106955855 gggcgaca--gaggcaagact-caatctcaaaaaaaaaaaaaaaaaaaaaaaagg-aaaaCTTTGTCATACA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55704965 29 + 59248254 aggaaacagcgagaTAAAACTGTCATCTT------------------------------------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47817558 29 + 51301725 aggaaacagtgAGTCAAAACTGTCATCTT------------------------------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533827 29 + 50890351 aggaaacagcgagacAAAACTGTCATCTT------------------------------------------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45888675 47 + 49145316 gggcgaca-------aagact-ccatctcaaaaaacaaaaacaaa-----------------CTGTCATATA i calJac3.chr22 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e rheMac3.chr19 60578685 28 + 64156825 I a score=206857.000000 s hg38.chr19_GL949747v2_alt 567023 72 + 729520 AGCTTTCAACCTAAAGCATTAGCCATATGCCCGTGTTTTTGTGCCTGGGACCATGACAACTTTCCCCATATC s panTro4.chr19 59842037 72 + 63644993 AGCTTTCAACCTAAAGCATTAGCCATATGCCCGTGTTTTTGTGCCTGGGACCATGACAACTTTCCCCATATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753123 71 + 60714840 AGCTTTCAACCTAAAGCATTAGCCATATGCCCGTG-TTTTGTGCCTGGGACCATGACAAATTTCCCCTTATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290611 72 - 106955855 AGCTTTCAACCTACAGCATTAGCCATATGCCCATGTTTTTGTGCCTGGGACCATGACAACTTTCCCCATATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60578713 72 + 64156825 AGCTTTCAACCTAAAGCATTAGCCATATGCCCTTGTTTTTATGCCTGGAACCGTGACAACTTCCTCCATATC i rheMac3.chr19 I 28 I 304 s macFas5.chr19 55704994 72 + 59248254 AGCTTTCAACCTAAAGCATTAGCCATATGCCCTTGTTTTTGTGCCTGGAACCGTGACAACTTCCCCCATATC i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47817587 71 + 51301725 AGCTTTCAACCTAAAGCATTAGCCATATGCCCTTG-TTTTGTGCCTGGGACCATGATAACTTCCcatatatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533856 72 + 50890351 AGCTTTCAACCTAAAGCATTAGCCATATGCCCTTGTTTTTGTGCCTGGAACCATGGCAACTTCCCCCATATC i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45888722 72 + 49145316 AGCTTTCAACCTAAAGCCTCGGCTATATGCCCTCGTTTCTGTGCCTGGGACCATGGCAACCTCCCCCGTATC i calJac3.chr22 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I a score=85692.000000 s hg38.chr19_GL949747v2_alt 567095 70 + 729520 AATGCtctta-----tttttttttttcgagacaag-agttttgctcttattgcccaggctggagtgcagtggcaca s panTro4.chr19 59842109 75 + 63644993 AATGCtcttattttttttttttttttcgagacaag-agttttgctcttattgcccaggctggagtgcagtggcaca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753194 68 + 60714840 AATGCTCtta------tttttttttttgagac-ag-agttttgcttgtattgcccaggctggagtgcagtggcacg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290683 67 - 106955855 AATGCTCGTA-------ttttttttttgagac-ag-agttttgctcttattgcccaggcaggagtgcagtgacgcg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55705068 69 + 59248254 tttttttttt-----ttttttttttttgagac-ag-agttttgctcttgttgcccaggctggagtgcaatgatgtg i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47817658 69 + 51301725 aatttttatt-----tattttttttttgagac-gg-agttttgctcttgttgcccaggctggagtgcaatggtgtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533929 66 + 50890351 ----AAtttt-----ttttttttttttgagac-agtagttttgctcttgttgcccaggctagagtgcaatggtgtg i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45888794 45 + 49145316 ------------------CATGTTCTTAAAAT----AGTTTCAC--------CCCTggccgg-gtgcagtggctca i calJac3.chr22 C 0 I 107 e canFam3.chr1 20002666 5603 - 122678785 I e rheMac3.chr19 60578785 304 + 64156825 I a score=201228.000000 s hg38.chr19_GL949747v2_alt 567165 124 + 729520 atctcagctcaccacaaactccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcatacaccaccccaccc----------ggctaattttgtatttttagtagagac s panTro4.chr19 59842184 124 + 63644993 atctcagctcaccgcaaactccgcctcccgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggcatacaccaccacaccc----------ggctaattttgtatttttagtagagac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753262 124 + 60714840 atctcagcttaccgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctcccgagtagctaggattacaggcatgcaccaccacaccc----------ggctaattttgtatttttagtagagac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290750 134 - 106955855 atctcggctcaccgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctcccaagtagctggaactacaggcatgcaccaccacgcccggctaattttggctaattttgtatttttagtagagat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55705137 124 + 59248254 atctcagctcaccacaacctccacctcccaggttcaagcgattctcctgcctcagcctctcaagtacctgggattacaggcatgcaccaccacgccc----------agctaattttgtattgttagtagagac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47817727 124 + 51301725 atcttggctcactgcaacttccgcctcccaggttcaagcgattctcctgcctcagcctctcgagtacctcggattaccggcatgcaccaccacatcc----------agctaattttgtattgttagtagagac i papAnu2.chr19 C 0 I 2924 s chlSab2.chr6 47533995 113 + 50890351 atctcagctcaccacaacctccacctcccg---------gattctcctgcctcagc--ctcgagtacctgggattacaggcatgcaccaccacgccc----------agctaattttgtattgttagtagagac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45888839 107 + 49145316 I e rheMac3.chr19 60578785 304 + 64156825 I a score=27768.000000 s hg38.chr19_GL949747v2_alt 567289 23 + 729520 ggggtttctccatgttgaggctg s panTro4.chr19 59842308 23 + 63644993 ggggtttctccatgttgaggctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753386 23 + 60714840 ggggtttctccatgttgaggccg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290884 23 - 106955855 ggggtttccccatgttgAAGCTG i nomLeu3.chr10 C 0 M 471 s macFas5.chr19 55705261 22 + 59248254 -gggtttcttcatgttcaggctg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47534108 23 + 50890351 ggggtttcttcatgttcaggctg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45888839 107 + 49145316 I e papAnu2.chr19 47817851 2924 + 51301725 I e rheMac3.chr19 60578785 304 + 64156825 I a score=57863.000000 s hg38.chr19_GL949747v2_alt 567312 84 + 729520 gtctcgaactcctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaggtgtgagccacagcgcctggc s panTro4.chr19 59842331 84 + 63644993 gtctcgaactcctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaggtgtgagccacagcgcctggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753409 84 + 60714840 gtctcgaactcctgacctcaagtgatccgcccacctcagcctccctaactgctgggattacaggcatgagccaccgcgcccggc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55705283 61 + 59248254 gtctcgaactcccgacctcaggtgatccacccgcctcggcctgccaaagtgctggaatcac----------------------- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47534131 84 + 50890351 gtctcgaactcccaacctcaggtgatccacccgcctcggcctgccaaagtgctgggatcacaggcgtgagccaccgcgcccggc i chlSab2.chr6 C 0 I 1 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45888839 107 + 49145316 I e nomLeu3.chr10 103290907 471 - 106955855 M e papAnu2.chr19 47817851 2924 + 51301725 I e rheMac3.chr19 60578785 304 + 64156825 I a score=1325.000000 s hg38.chr19_GL949747v2_alt 567396 10 + 729520 TGCTCTTA---TT s panTro4.chr19 59842415 10 + 63644993 TGCTCTTA---TT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753493 13 + 60714840 cACTCTTATTCTT i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45888839 107 + 49145316 I e nomLeu3.chr10 103290907 471 - 106955855 M e chlSab2.chr6 47534215 1 + 50890351 I e papAnu2.chr19 47817851 2924 + 51301725 I e macFas5.chr19 55705344 0 + 59248254 C e rheMac3.chr19 60578785 304 + 64156825 I a score=26130.000000 s hg38.chr19_GL949747v2_alt 567406 97 + 729520 AAAATAGTCTCATCACCTACCGCAAGCGTG-GAGAGCCAAGTGAGGAGAGGGGTCAGTCCCTTTTGGCAGCGCCTGGAAGCCAGTGCTAACATCATGG s panTro4.chr19 59842425 97 + 63644993 AAAATAGTCTCATCACCTACCGCAAGTGTG-GAGAGCCAAGTGAGGAGAGGGGTCAGTCCCTTTTGGCAGCACCTGGAAGCCAGTGCTAACATCATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753506 96 + 60714840 CAAATAGTCTCATCACCTGCCGCGAGTTTG-GAAAGCCAAGTGAGGAGAGGGGTCAGTCCCTTTTAG-GGGACCTGGAAGCCAGTGCTAACATCATGG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55705344 24 + 59248254 -----------------------aagcgtg----agcca----------------------------ccgcgcccg---gcc---------------- i macFas5.chr19 C 0 C 0 s calJac3.chr22 45888946 96 + 49145316 aaaataattTCACC-CCTACCAAAAGTCTGCTGGAGTCAAGTGAGGAGAGGGATCCATCACTTTGGTCAGCACCTGGAAGCCAGTGCTAACGCAAAG- i calJac3.chr22 I 107 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e nomLeu3.chr10 103290907 471 - 106955855 M e chlSab2.chr6 47534215 1 + 50890351 I e papAnu2.chr19 47817851 2924 + 51301725 I e rheMac3.chr19 60578785 304 + 64156825 I a score=55779.000000 s hg38.chr19_GL949747v2_alt 567503 33 + 729520 TGACAACTT---TTCATTCTTAAGGAAAATTGCGGA s panTro4.chr19 59842522 33 + 63644993 TGACAACTT---TTCATTCTTAAGGAAAATTGCAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753602 33 + 60714840 CGACAACTT---TTCATTCTTAAGGAAAATTGCGGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60579089 33 + 64156825 TGACAACTT---GTCATTCTTAAGGAAAATTGTGGA i rheMac3.chr19 I 304 C 0 s macFas5.chr19 55705368 33 + 59248254 TGACAACTT---GTCATTCTTAAGGAAAATTGTGGA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47534216 33 + 50890351 TGACAACTT---TTCATTCTTAAGGAAAATTGTGGA i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45889042 36 + 49145316 TGACAACTTTTCTTCGTTCTTAAGGAAAATTGCAGA i calJac3.chr22 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e nomLeu3.chr10 103290907 471 - 106955855 M e papAnu2.chr19 47817851 2924 + 51301725 I a score=534078.000000 s hg38.chr19_GL949747v2_alt 567536 281 + 729520 ----------------------------------------------------------------------------------------GTGACTTCTATGCATTTTCTATGAATGACCAAATACAGGGTGTGGAAAAGCTGTGTTTGCCATGGCAATGGGAAGCCGAGAGAAACGGGGAGGCGAGagagacagagacatacacagagactcccagagacagccacac------agactcacacagaaac---------------------agacagacaggctgggctcggtggctcacgcctgtaatcccaccactctgggaggctgaggcgggtagatcacctgaggtcaggagtccgagaacagcctggccaacattgtgaaaccccgtctct s panTro4.chr19 59842555 281 + 63644993 ----------------------------------------------------------------------------------------GTGACTTCTATGCATTTTCTATGAATGACCAAATACAGGGTGTGGAAAAGCTGTGTTTGCCATGGCAATGGGAAGCCGAGAGAACCGGGGAagcgagagagacagagacatacacagagactcccagagacagccacac------agactcacacagaaac---------------------agaCAGACAggctgggcgcagtggctcacgcctgtaatcccaccactctgggaggctgaggcgggtggatcacctgaggtcaggagtccgacaacagcctggccaacattgtgaaaccccgtctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753635 275 + 60714840 ----------------------------------------------------------------------------------------GTGACTTCTATGCATTTTCTATGAATAACCAAATACACGGTGTGGAAAAGCTGTGTTTGCCGTGGCAATGGGAAGCAGAGAGAACCAGGGAGGTG--------AGAGACATACACAGAGACTCCCAGAGACAGCCACGC------AGACTCACacagaaac-------------------agagacagacgggctgggcccggtggctcacgcctgtaatcccaccactctgggaggccgaggcgggtggatcacctggggtcaggagttcgagaacagcctggccaacattgtgaaaccccgtctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103291378 278 - 106955855 ----------------------------------------------------------------------------------------GTGACTTCTATGCGTTTTCTATG-ATGACCAAATACAGGGTGTGGAAAAGCTGTGTTTGCCATGGCAATGGGAAGCAGAGAGAACCGGGGAGGGG--agagacagagacatacacagagactcccagagacagcca--c------agactcacacagaaac-------------------agagatagacaggctgggcgcggtggctcacgcctgtaatcccaccactttgggaggccaaggcgggtggatcacctgaggtcaggagttcaagaccagcctggccaacgttgtgaaaccctgtctct i nomLeu3.chr10 M 471 C 0 s rheMac3.chr19 60579122 275 + 64156825 ----------------------------------------------------------------------------------------GTGGCTTCTATGCATTTTATATGAATGACCAAATACAGGGTGTGGAAAAGCTGTGTTTGCCATGGCAATGGGAAGC--AGAGAACCGGGGAGGCG--agagacagagacat--acagagactcccagagacagccacac------agactcacacagaaac---------------------agacacaCAggctgggtgcagcgactcacacctgtgatcccagcactccgggaggccgaggcgggtggatcacctgaggtcaggagttcgagaacagcctgcccaacgttgtgaaaccccatctct i rheMac3.chr19 C 0 I 420 s macFas5.chr19 55705401 271 + 59248254 ----------------------------------------------------------------------------------------GTGGCTTCTATGCATTTTATATGAATGACCAAATACAGGGTGTGGAAAAGCTGTGTTTGCCATGGCAATGGGAAGC--AGAGAACCGGGGAGGCg--agagacagagacat--acagagactcccagagacagccacac------agactcacacagaaac---------------------agacacacaggctgggtgcagcgactcacacctgtgatcccagcgctctgggaggccgaggcgggtggatcacctgaggtcaggagttcgagaacagcctgcccaacgttgtgaaaccctct---- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47534249 268 + 50890351 ----------------------------------------------------------------------------------------GTGGCTTCTATGCATTTTATATGAACGACCAAATACAGGGTGTGGAAAAGCTATGTTTGCCATGGCAATGGGAAGCAGAGAGAACTGGGGAGGCG--AGAGACAGAGACATACACAGAGACTCCCAGAGACAGCCACAC------AGACTCACACAGAAAC---------------------AG----ACAggctgggcgcggcgactcacacctgtaatcccagcgctctgggaggccgaggcgggtggatcacctgaggtcaggagtctgagaacagcctgcccaac---gtgaaaccctct---- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45889078 380 + 49145316 GTGGCTTTTTgttccctgactgggaattgaacctgggccgcagcagtgagagcactgcatcgtaaccactagaccaccagggaGCAGAGTGGCTTCTATGCATTTTCTATGAATGACCAAATACAG---GTGTAAAAGCTGTGTTTCCCAGGGCAATGGGAAGTAAAGAGAAGGCGGCAGGCG--------AGAGACAT--ACACAGACTCCcagagacagccacacagagatagagacacacggagacagagacacaacagagagacagagacagaCA-gccaggtccagtggctcacatctgtaatcccagcactttgggaggccgagacaggtgaatcac--aaggtcaagagatcgagaccatcctggtcagcatggtgaaaccccatctct i calJac3.chr22 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e papAnu2.chr19 47817851 2924 + 51301725 I a score=201609.000000 s hg38.chr19_GL949747v2_alt 567817 182 + 729520 agtaagaatac-aaaaaattagccaggcatggtggcacagggctgtaattccggctactcggaaggctgaggcaggagaatcacttgaacctgggaggcgc-ggttgcagtgagctgagatcacgccattgcactccag---------catgggcaacaagagtgaaactccgtctcaaaaaa---aaaaaaaaaa s panTro4.chr19 59842836 183 + 63644993 agtaagaatac-aaaaaattagccaggcatggtggcacagggctgtaattccagctactcggaaggctgaggcaggagaatcacttgaacctgggaggcgcaggttgcagtgagctgagatcacaccattgcactccag---------catgggcgacaagagtgaaactctgtctcaaaaaa---aaaagaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753910 183 + 60714840 agtaagaacac-aaaaagttagctgggcatggtggcacacgactgtaattccggctactcggaaggctgaggcaggagaatctcttgaacctggtaggcggaggttgcagtgagccgagatcacaccattgcgctccag---------catgggcgacaagagtgaaacgccgtctcaaaaaa---aaaaaaagaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103291656 193 - 106955855 agtaagaatacaaaaaaattagccaggcatggtggcatacgactgtaattccggctactcggaaggctgaggcagaagaatctcttgaacctggtaggcggaggttgcagtgagccaagatcatgctattgcactccagcatgggcgacatgggcgacaagagtgaaactccatctcaaaaaa---aaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55705672 185 + 59248254 agaaagagtac-aaaaaattagccgggcatggtggcacatgcctgtaattccagctactcgggaggctgaggcaggagaatctcttgaacccaggaggcggaggttgcagtgagccgagatcacgccattgcactccag---------cctggggaac-agagagaaactccgtctcaaaaaaaagaaaaaaaaga i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47534517 94 + 50890351 agaaagaatac-aaaaaattagcccggcatgg----------------------------------------------------------------------------------------tcacgccattgcactccag---------cctgggcaac-agagagaaactccgtctcaaaaaa---aaaagagaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45889458 179 + 49145316 actaaaaatac--aaaaattagctggctatggtggtgtacgcctgtagtcccagctactcgggaggctgaggcaggacgatgacttgaacccgaaaggcagaggttgcagcgaac-actcctacgccactgcactccc----------cactggtgac-agagcgagactccatttcaaaaaa---gaaaaacaaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e papAnu2.chr19 47817851 2924 + 51301725 I e rheMac3.chr19 60579397 420 + 64156825 I a score=-4249.000000 s hg38.chr19_GL949747v2_alt 567999 14 + 729520 aaaaaacgaaagaa- s panTro4.chr19 59843019 9 + 63644993 ga-----gaaagaa- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56754093 12 + 60714840 ag--aacagagaga- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103291849 9 - 106955855 aa-----aaaagaa- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55705857 10 + 59248254 aa-----gagacagc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47534611 10 + 50890351 CA-----GAGACAGC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45889637 0 + 49145316 C e papAnu2.chr19 47817851 2924 + 51301725 I e rheMac3.chr19 60579397 420 + 64156825 I a score=128990.000000 s hg38.chr19_GL949747v2_alt 568013 155 + 729520 cagagaga--------------cac--atacaaagacagagat------agaaacgcccagcgacag------agagacacacagagaaacacagacagacacagagacacacacacagaaacagacacagagacag----agagacaaaaagacagacacagagaaacaaagagagacacacagag s panTro4.chr19 59843028 131 + 63644993 CAGagaga--------------cac--atacaaagacagagat------agaaacgcccagcgacag------agagacacac------------------------acacagaaacagacacagagacagagaaag----agagacaaaaagacagacacagagaaacaaagagagacacacagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56754105 135 + 60714840 cagagaga--------------cac--atacaaagacagagatacagagaaaaacgcccagagacag------agagacacac------------------------agagaaacacagagaaagagacagacacag----agagacacac--acagaaagagacaaaaagacagagacacagagaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103291858 124 - 106955855 cagagagacagagacaaagagtcac--atacaaagacagagatacgga-gaaaacacccagagacag------agagacacac--------------------------------agagaaacagacacagcgatag------------------agacacagagaaacaaagagagac----agag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55705867 133 + 59248254 cagagaga--------------cac--atacagagacagagatac----agaaacgcccagagacagacgcacagagacacac------------------------aaagagac--agacacacacacagaaacagcgatagagacacagagagagagacaa--------aaagagatacagagaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47820775 141 + 51301725 cagagaga--------------cac--atacagagacagagatac----agaaagacccagagacagacacacagagacacac------------------------aaagagacagagacacacacacagaaacagtgatagagacacagagacagagaaagacagac--aaagagatacagagaa i papAnu2.chr19 I 2924 I 3 s chlSab2.chr6 47534621 145 + 50890351 CAGAGAGA--------------CACAAAGACAGAGACAGAGATAC----AGAAACGCCCAGAGACAGATACACAGAGACACAC------------------------AAAGAGACAGAGACACACACACAGAAACAGCGATAGAGACACagagacagagaaagagagacaaaaagagatacagagga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45889637 0 + 49145316 C e rheMac3.chr19 60579397 420 + 64156825 I a score=210228.000000 s hg38.chr19_GL949747v2_alt 568168 122 + 729520 acagagagagagagagacacatacacacacacaCAGAGAGTAGGAGGCGGCCCGTGGGAGCCGAGCAGAACCAGCGTGAGGCAGGGCCATCTTCTGAATTAAAGGCAACAGTGACTGTAAGC s panTro4.chr19 59843159 121 + 63644993 acagagacagagagagacacaTACACACACACACAGAGAGTAGGAGGCGGCCCGTGGGAGCCAAGCAGAACCCGCGTGAGGCAGGGCCATCTTCTGAATTAAAGGCAAC-GTGACTGTAAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56754240 101 + 60714840 acaaagatagag---------------------TAGGGAGTAGGAGCCGGCCCGTGGGAGCCAGGCAGAGCCGGCGTGAGGCACGGCCATCTTCTGAATTAAAGACTGCAGTGACTGTAAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103291982 110 - 106955855 acagagaga------------cacacacacacagggagagTAGCAGCCAGCCCGTGGGAGCCAGGCAGAGCCGGCGTGAGGCAGGGCCATCTTCTGAATTAAAGGCAATAGTGACTGTAAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60579817 122 + 64156825 acagagaaacaaagagagacaCACACACACACACAGAAAGTAGGAGCCGGCCCGTCGGAGCCAGGCAGAGCCAGTGTGAGGCAAGGCCATCTTCTGAATTAAAGGCAACAGTGCCTGGAAGC i rheMac3.chr19 I 420 C 0 s macFas5.chr19 55706000 112 + 59248254 ----------acagagagacacacacacacacaCAGAAAGTAGGAGCCGGCCCGTAGGAGCCAGGCAGAGCGAGTGTGAGGCAAGGCCATCTTCTGAATTAAAGGCAACAGTGCCTGGAAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47820919 111 + 51301725 -----------aagagagagacacacacacacacagaaagtaGGAGCCGGCCCGTAGGAGCCAGGCAGACCCAGTGTGAGGCAAGGCCATCTTCCGAATTAAAGGCAACAGTGCCTGGAAGC i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47534766 104 + 50890351 ----------acagagag--------acaCACACAGAAAGTAGGAGCCGGCCCGTAGGAGCCAGGCAGAGCCAGTGTGAGGCAAGGCCATCTTCTGAATTAAAGGCAACAGTGCCTGTAAGC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45889637 0 + 49145316 C a score=684025.000000 s hg38.chr19_GL949747v2_alt 568290 314 + 729520 TTCTGCTTTGTGAGTAACAGGATAGATTAGAACA-GGGCTGGCTGCCTATGGCCCACGAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGTGCCAGCCAGGCC---------------CTGCgctgcttccatg-------------tccaaagacacagctgagagctgatg----agagaccgcggggcccacagtgccaagcatatgaactatctggccc------------gttTGTCAATGCGTGGGTTGATCACATAAGTTATGATCACATAAGTCACAAAGA--------CACACTGATCACATAGATGC-ACCTGGCAGCTAG-----TAGACCACGTGGTGCCTGAGTTAGGG-AAGAA--------AAGAAATAGAAG--- s panTro4.chr19 59843280 313 + 63644993 TTGTGCTTTGTGAGTAACAGGATAGATTAGAACA-GGGCTGGCTGTCCATGGCCCACGAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGTGCCAGCCAGGCC---------------CTGTGCTGCTTCCATG-------------TCCAAAGGCACAGCTGAGAGCTGATG----AGAGA-CGCGGGGCCCACAGTACCAAGCATATGAACTATCTGGCCC------------GTTTGTCAATGGGTGGGTTGATCACATAAGTTATGATCACATAAGTCACAAAGA--------CACACTGATCACATAGATGC-ACCTGGCAGCCAG-----TAGACCACGTGGTGCCTGAGTTAGGG-AAGAA--------AAGAAATAGAAG--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56754341 307 + 60714840 TTGTGCTTTGTGAGTAACGGGATAGATTAGAACA-GGGCTGGCTGCCCATGGCCCACGAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGTGCCAGCCAGGCC---------------CTGTgctgcttccatg-------------tccaaaggcacagctgagcgctgatg----agagaccgtggggcccacagtgccaagcatattaactatctggccc------------gttTGTCAATGCATGGGT--------TAGGATATGAGCACATAAGTCACAAAGA--------CACACTGATCACACAGATGC-ACCAGACAGCTAGCAAACTAGACCAAGTGGTGTCTGAGTTAGGG-AAG------------GACATAGAAG--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103292092 307 - 106955855 GTGTGCTTTGCAAGTAACAGGATAGATTAGAACA-GGGCTGGCTGCCCATGGCCCACGAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGCCCCAGCCAGACC---------------CTGCgctgcttccatg-------------tccaaaggcacagctgagagctgatg----agagaccacggggcccacagtgccacgcatattaactatctggccc------------gttTGTCAATGCATGGCT--------TAGGATATGAGCAAATAAGTCACAAAGA--------CATACTGATCACATAGATAC-ACCAGGCAGCTAGTAAACTAGACCAAGTGGTGCCCGAGTTAGGG-AAG------------AAAATACAAG--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60579939 332 + 64156825 TTGT--TTCGTGGGTAACAGGATGGATTAGAACA-GGGTTGGCTGCCCGTGGCCCTCAAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGTGTGagccaggcccttggcacggatcatctgcactgcttccgtg-------------tacaaaggcacagctgagagctgatg----agagaccacggggcccacggtgccaagcatattaactatctggccc------------gttTGTCAACACGTGGGT--------TAGGATATGATCAAATAAGTCACAAAGA--------CACACCGATCACATAGATGC-ACCAGGCAGTTAGTAAACTAGACCAAGGGGTGCCTGAGTTAGAG-AAAAAAAAGAAATAAGAAATAGAAG--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55706112 325 + 59248254 TTGT--TTCGTGGGTAACAGGATGGATTAGAACA-GGGTTGGCTGCCCGTGGCCCTCAAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGTGTGagccaggcccttggcacggatcatctgcactgcttccgtg-------------tacaaaggcacagctgagagctgatg----agagaccacggggcccacggtgccaagcatattaactatctggccc------------gttTGTCAACGCGTGGGT--------TAGGATATGATCAAATAAGTCACAAAGA--------CACACCGATCACATAGATGCAACCAGACAGTTAGTAAACTAGACCAAGGGGTGCCTGAGTTAGGG-AAGAA--------AAGAAATAGAAG--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47821030 324 + 51301725 TTGT--TTCATGGGTAACAGGATGGATTAGAACA-GGGTTGGCTGCCCGTGGCCCTCAAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGTGTGAGCCAGGCCTTTGGCACAGATCATCTGCACTGCTTCCGTG-------------TACAAAGGCACAGCTGAGAGCTGATG----AGAGACCACGGGGCCCACAGTGCCAAGCATATTAACTATCTGGCCC------------GTTTGTCAACGCGTGGGT--------TAGGATATGCTCAAATAAGTCACAAAGA--------CACACTGATCACATAGATGC-GCCAGGCACTTAGTAAACTAGACCAAGGCGTGCCTGagttagag-aagaa--------aagaaatagaag--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47534870 320 + 50890351 TTGT--TTCGTGGGTAACAGGATGGATGAGAACA-GGGTTGGCTGTCCGTGGCCCTCAAGCTGTTTCTGG----------------------GAAGCCTCCACAGGTGCGAGCCAGGCCCTTGGCACAGATCATCTGCActgcttccgtg-------------tacaaaggcacagctcagagctgatg----agagaccacggggcccacagtgccaagcatattaactatctggccc------------gttTGTCAACACGGGGGT--------TAGGATACGATCAAATAAGTCACAAAGA--------CACACCAATCACATAGATGC-ACCAGGCAGTTAGTAAACTAGACCAAGGGGTGCCTGAGTTAGAG-AAGAA------------AATAGAAG--- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20008269 379 - 122678785 TTGTCCTTCATAAGTAACAGAAGAGATTAGAAcaggggttggcaaactatggcccatgggccaaagctggcctattgcctatttttataaataaagttttattggaacacagccatacc--------cattcatttgcgtattgtctatggctctttgcacactacaacagcaaagt--ggaattgtcgtaacagtgaccatacagcttacag-acctaaaatattagctatctggctctttacagaaaaagttAACTACCTTCTGGGA--------TAGAATATCCTAAAACTAGTTAAGGAGGCCACAGACCACACTGATCATGTAGACTC-ATCAGACAACTTTTAAATTTAGCCAAGTAATACCTGAGCTAGGGCAAAAA--------AAAAAAAAGAAAGAA i canFam3.chr1 I 5603 C 0 e calJac3.chr22 45889637 0 + 49145316 C a score=1445081.000000 s hg38.chr19_GL949747v2_alt 568604 469 + 729520 AATCAACCGAATCATCCCTGAACTTCTTAGCAATACTTCCTCCTAGACGAAGCA--CAGAGTACCATGTTTA-TTGCAGGTTTGCTCCTGAGCATGTCAATAAACGCAGCTGCAACGAGAGTGCTCTAAC--TTTATTA---------TCCCTGTGAGAAAGTACATAGCGTCATGTGAAGGGGGTGCGTGACTCGTGCAGAATCTCCCAAAAA-TAGTGAGAAAACCAGTGTCAAATCCTACCTCTCGAC--AGACTCTAGTGTTAACATGTGACCCTCTGACCTGCATTCATAAGACATCTTAGAG--ACCCGAATCCCGCTTC---CTGTGTAATTCGTAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACGGAGGTGCCGTTGCCCCGGAAGCATTGCAATCAATAGTCAGCTTGGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGATTTCCAAATTAGTTTCATAGGTCTTCA s panTro4.chr19 59843593 471 + 63644993 AATCAACCGAATCATCCCTGAACTTCTTAGCAATACTTCCTCCTAGACGAAGCA--CAGAGTACCATGTTTA-TTGCAGGTTTGCTCCTGAGCATGTCAATAAACGCAGCTGCAGCGAGAGTGCTCTAAC--TTTATTA---------TCCCTGTGAGAAAGTACATAGCGTGATGTGAAGGGGGTGCGTGACTCGTGCAGAATCTCCCAAAAA-CAGTGAGAAAACCAGTGTCAAATCCTACCTCTCGACATAGACTCTAGTGTTAACATGTGACCCTCTGACCTGCATTCATAAGACATCTTAGAG--ACCCGAATCCCGCTTC---CTGTGTAATTCGTAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACGGAGGTGCCGTTGCCCCGGAAGCATTGCAATCAATAGTCAGCTTGGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGACTTCCAAATTAGTTTCATAGGTCTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56754648 471 + 60714840 AATCAACCGAATCATCCCTGAACTTCTTAGCAATACTTCTTCCTAGACTAAGCA--CAGAGTACCATGTTTA-TTGCAGGTTTGCTCTTGAGCATGTCAATAAACGCAGCTGCAACGAGCGTGCTCTAAC--TTTATTA---------TCCCTTTGAGAAAGTACATAGCGTGATGTGAAGGGGGTGCGTGACTTGTGCAGAATCTCCCACAAA-CAGTGAGAAAACCAGTGTCAAGTCCTACATCTTGACACAGACTCTAGTGTTAACATGTGACCCTCTGACCTGCATTCCTAAGACATCTTAGAG--ACCCAATTCCCGCTTC---CTGTGTAACGCGTAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACCGAGGTGCCATTGCCCCGGAAGCATTGCAATCAATAGTCAGCTTCGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGATTTCCAAACTAGTTCCATAGCTCTTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103292399 468 - 106955855 AATCAACGGAATCATCCCTGAACTTCTTAGCAACACTTCCTCCTAGACTAAGCA--CAGAGTACCATATTTA-TTGCAGGTTT-CTCTTGAGCATGTCAATAAACGCAGCTGCAACGA--GTGCTCTAAC--TTTATTA---------TCCCTGTGAAAAAGTACATAGCGTGATGTGAAGGGGGTGCGTGACTGGTGCAGAATCTCCCAAAAA-CAGTGAGAAAACCAGTGTCAAATCCTATATCTTGACACAGACTCTAGTGTTAACATGTGACCCTCTGACCTGCATTCATAAGACACCTTAGAG--ACCCGATTCCCGCTTC---CTGTGTAATTCACAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACGGAGGTGCCGTTGGCCCAGAAGCATTGCAATCAATAGTCAGCTTCGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGATTTCCAGATTAGTTTCATAGGTCTTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60580271 469 + 64156825 AATCAACAGAATCATCCCTGAACTTCTCAGCGATACTTCTTCCTAGACTAAGCA--CAGAGTAGCATGTTTA-TGGCAGGTTTACCCTTGAGCATGTCAATAAACGCAGCTGCAACGAGAGTGCTC--AC--TTTATTA---------TCCCTGTGAGAAGGTGCGTAGTGTGATGTGAAGGGGGTGTGTGACTTGTGCAGAATCTCCCACAAA-CAGTGAGAAAACCAGTGTCAAATTTGACATCTTGACACAGACTCTAGTGTTAACACGTGACCCTCTGACCTTCATTCACAAAATATCTTGGAG--ACCAGATTCCCGCTTC---CTGTGTAATTCGTAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACGCAGGTGCCGTTGCCCCGGAAGCATTGCAATCAATTGTCAGCTTAGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGATTTCCAAATTAGTTTCATAGGTCTTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55706437 469 + 59248254 AATCAACAGAATCATCCCTGAACTTCTCAGCAATACTTCTTCCTAGACTAAGCA--CAGAGTAGCATGTTTA-TGGCAGGTTTACCCTTGAGCATGTCAACAAACGCAGCTGCAACGAGAGTGCTC--AC--TTTATTA---------GCCCTGTGAGAAGGTGCGTAGTGTGATGTGAAGGGGGTGTGTGACTTGTGCAGAATCTCCCACAAA-CAGTGAGAAAACCAGTGTCAAATTTGACATCTTGACACAGACTCTAGTGTTAACACGTGACCCTCTGACCTTCATTCACAAAATATCTTGGAG--ACCAGATTCCCGCTTC---CTGTGTAATTCGTAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACGCAGGTGCCGTTGCCCCGGAAGCATTGCAATCAATTGTCAGATTAGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGATTTCCAAATTAGTTTCATAGGTCTTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47821354 469 + 51301725 aatcaACAGAATCATCCCTGAACTTCTCAGCAATACTTCTTCCTAGACTAAGCA--CAGAGTAGCATGTTTA-TGGCAGGTTTACCCTTGAGCATGTCAATAAATGCAGCTGCAATGAGAGTGCTC--AC--TTTATTA---------TCCCTGTGAGAAGGTGCGTAGTGTGATGTGAAGGGGGTGTGTGACTTGTGCAGAATCTCCCACAAA-CAGCAAGAAAACCAGTGTCAAATTTGACATCTTGACACAGACTCTAGTGTTAACACGTGACCCTCTGACCTTCATCCACAAAATATCTTAGAG--ACCAGATTCCCGCTTC---CTGTGTAATTCGTAGAG-CGATCCCAGGCTGCTCAGCaaaaaaaGTCACAGCACGGAGGTGCCGTTGCCCCGGAAGCATTGCAATCAATTGTCAGCTTAggattcttttctttcacttcctcCAACAGCTTCTTGATTTCCAAATTAGTTTCATAGGTCTTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47535190 469 + 50890351 AATCAACAGAATCGTGCCTGAACTTCTCAGCAATACTTCTTCCTAGACTAAGCA--CAGAGTAGCATGTTTA-TGGCAGGTTTACCCTTGAGCATGTCAATAAACGCAGCTGCAACGAGAGTGCTC--AC--TTTATTA---------TCCCCGTGAGAAGGTGCATAGTATGATGTGAAGGGGGTGTGTGACTTGTGCAGAATCTCCCACAAA-CAGCGAGAAAACCAGTGTCGAATTCGACATCTTGACACAGACTCTAGTGTTAACACGTGACCCTCTGACCTTCATTCACAAAATATCTTAGGG--ACCAGATTCCCGCTTC---CTGTGTAATTCGTAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACGCAGGTGCCGTTGCCCCGGAAGCACTGCAATCAATTGTCAGCTTAGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGATTTCCAAATTAGTTTCATAGGTCTTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45889637 443 + 49145316 aaCC------ATCATCCCTGAACTTCTTAGTAGT-----TTCCTAGACTGAGCA--CAAAGCACTGTATGTA-CTGCAGGTTTGCTCTTGGGCACGTCAATAAA--CAGCTCCAACGAGAATGCTCCAACTTTTTATTA---------TCCCGGTGAGAAAGTGCACAGCATGAAGTGAAGGGCGTGCGTGGCTTCTGCAGAATCTCCCACGAA-CAGCGAGAAAAGCAGTGTCAAGTCCTGC-----------------AGAGTTAACATGTGACCCTCTGACCCACATTCATACGGTATCTTAGAG--ACCAGATTCCCACTTC---TCATGTAATTCGTATGG-CAATCCCAGCCTGCTCAGCAAAAAGAGTCACAGCACCCAGGTGCGGCCTCCCCGGAAGCATCGCAGTCAATCGTCAGCTTGGGATTCTTTCCTTTCACTTCCTCCAGCAGCTTCTCGATTTCCAAACTAGTGTCATAGGTCTTCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 20008648 481 - 122678785 AACCAACATAACCATCTATGAACTT---AGTAGTATTTTTTCCTAGACTAAGTATGCCAAGTATAAAGTTAACCCTTAAGTTAGGTCTTAGGTACATTAATAAGCACAGTTTCAAACAAAGTTCTTTGCT--TTTACTATAGCTTGTGTCCTTGTGAAATAACAGACATTTTGACATAAAGTACGTGTGTGACTTGTGCAGAATTTACCATAAACCAGAGAGAAAGCCAGCACTAAATGCTACATTTTGACCCA------ATAATTAACATATTACCCTCTGGTCTTCATTCGTGGTGTGTCTAAGAGAAATAAGATCACCCCTTCAAGACACATAGTCACTAAAGATGGTCTCAGGGTGTTCAAGACAGGAAGTCACAACATGGAGACCTGCTTGCTCTGGCATCACTGCATTCAATGGTCAGATCTGGATTGTGGCCTTTCACATCTTTCAGCAGCTTCTGGATTTCCACGCTAGACTTGTCTATCTCCA i canFam3.chr1 C 0 C 0 a score=87095.000000 s hg38.chr19_GL949747v2_alt 569073 32 + 729520 ACCTGGAGGGATCAGAGAACACAAATGTTCCC-------------------------- s panTro4.chr19 59844064 32 + 63644993 ACCTGGAGGGATCAGAGAACACAAATGTTCCC-------------------------- i panTro4.chr19 C 0 I 26 s ponAbe2.chr19 56755119 32 + 60714840 ACCTGGAAGGATCAGAGAACACAAATGTTCCC-------------------------- i ponAbe2.chr19 C 0 I 142 s nomLeu3.chr10 103292867 32 - 106955855 ACCTGGAGGGATCAGAGAACACAAATGTTCCC-------------------------- i nomLeu3.chr10 C 0 I 26 s rheMac3.chr19 60580740 32 + 64156825 ACCTGCAGGGATCAGAGAACACAAATGTTCCC-------------------------- i rheMac3.chr19 C 0 I 26 s macFas5.chr19 55706906 32 + 59248254 ACCTGCAGGGATCAGAGAACACAAATGTTCCC-------------------------- i macFas5.chr19 C 0 I 26 s papAnu2.chr19 47821823 32 + 51301725 ACCTGCAGGGATCAGAGAACACAAATGTTCCC-------------------------- i papAnu2.chr19 C 0 I 26 s chlSab2.chr6 47535659 32 + 50890351 ACCTGCAGGGATCAGAGAACACAAATGTTCCC-------------------------- i chlSab2.chr6 C 0 I 26 s calJac3.chr22 45890080 57 + 49145316 GCCTGGA-GGATCAGAGAACACAAATGTTTGCAGAGCGCCTACAGTTTCACTGTCCCA i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C a score=772451.000000 s hg38.chr19_GL949747v2_alt 569105 323 + 729520 AGAAATTCATTCTCAACTACCCAGGATGCCTGAATATCTGTTTTCAAACACTCAAAGCAGGAAACGTTTTTGGGAttttct-gggggacagggtct-----tgctctgttgcccaggctggggtacagtggtgccatcttggctctctgcaacctccagctcccaagttcaagcaattctcatgcctcaggctcctgagtaactgtgattacaggtgtgcaccaccacgcttggctaagtt---ttgta-------tttacagt-----------------------agagatggggttttgacatgttagccaggctgg-------------------------------tctcgaacttctggcctcaagtgatccatccacctcggcctc s panTro4.chr19 59844122 324 + 63644993 AGAAATTCATTCTCAACTACCCAGGATGCCTGAATATCTGTTTTCAAACACTCAAAGCAGGAAACGTTTTTGGGATTTTCTGGGGGgacagggtct-----tgctctgttgcccaggctggggtacagtggtgccatcttggctctctgcaacctccagctcccaagttcaagcaattctcatgcctcaggctcctgaataactgtgattacaggtgtgcaccaccacgcttggctaagtt---ttgta-------tttacagt-----------------------agagatagggtttcgacatgttagccaggctgg-------------------------------tctcgaacttctggcctcaagtgatccatcgacctcggcctc i panTro4.chr19 I 26 C 0 s ponAbe2.chr19 56755293 323 + 60714840 AGAAATACATTCTCAACTACCCAGGATGCCTGAATATCTGTTTTCAAACACTC-AATCAGGAAACGTTTTTGGGATCTTCTGCGGGgacagggtct-----tgctctgttgcccaggctggggtgcagtggtgccatcttggctctctgcaacctccagctcccaagttcaagcgattctcatgcctcaggctcctgagtaactgtgattacaggtgtgcaccaccacactcggctaagtt---ttgta-------tttacagt-----------------------agagacggggtttcgacatgttagccaggctgg-------------------------------tctcaaacttctggcctcaagtgatcagtccacctcggcctc i ponAbe2.chr19 I 142 C 0 s nomLeu3.chr10 103292925 324 - 106955855 AGAAATTCATTCTCAACTAACCAGGATGCCTGAATATCTGTTTTCAAACACTCAAAGCAGGAAACGTTTTTGGGATTTTCTGGGGGgacagggtct-----tgctctgttgcccaggctggggtacagtggtgccattttggctctctgcaacctccagctcctgagttcaagcaattctcatgcctcaggctcctgagtaactgtgattacaggtgtgcaccaccacgctcggctaagtt---ttgta-------tttacagt-----------------------acagatggggtttcaacacgttagccaggctgg-------------------------------tctcgaacttctggcctcaagtgatccgtccacctcggcctc i nomLeu3.chr10 I 26 C 0 s rheMac3.chr19 60580798 328 + 64156825 AGAAATTCATTCTCAACTACCCAGGATGCCTGAACATCTGTCTTCAAACACTCAAAGCAGGAAACGTTTTTGGGATTTT-TGGGGGGACAGGTTCTGGCTCTgctctgttgcccaggctggggtgcagtggtgccatcttggctctccgcaacctccaggtcccaggctaaagcgactctcatgccttagcctcctgagtaacggggattacaggtgtgcaccatcacgcttggctaagtt---ttgca-------tttacagt-----------------------agagatggcgtttcgacatgttagccaggctgg-------------------------------tctcgaacttctggcctcgagtgatccatccccctcggcctc i rheMac3.chr19 I 26 C 0 s macFas5.chr19 55706964 328 + 59248254 AGAAATTCATTCTCAACTACCCAGGATGCCTGAACATCTGTCTTCAAACACTCAAAGCAGGAAACGTTTTTGGGATTTT-TGGGGGGACAGGTTCTGGCTCTgctctgttgcccaggctggggtgcagtggtgccatcttggctctccgcaacctccaggtcccaggttcaagcgactctcatgccttagcctcctgagtaacggggattacaggtgtgcaccatcatgcttggctaagtt---ttgca-------tttacagt-----------------------agagacggcgtttcgacatgttagccaggctgg-------------------------------tctcgaacttctggcctcgagtgatccgtccacctcggcctc i macFas5.chr19 I 26 C 0 s papAnu2.chr19 47821881 346 + 51301725 AGAAATTCACTCTCAACTACCCAGGATGCCTGAACACCTGTTTTCAAACACTCAAAGCAGGAAACATTTTTGGGATTTT-TGGggggacagggtctggctctgctctgtggcccaggctggggtgcagtggtgccatcttggctctctgcaacctccaggtcccaggttcaagcgactctcatgccttagcctcc----taacagggattacaggtgtgcaccatcacgcttggctaagtt---tt-ta-------tttACAGGCTAAGTTTTGTAAATGCCGCCTAAGAGGTGGcatttcaacatgttagccaggctgg-------------------------------tctcgaacttctggcctcgagtgatccgtccacctcggcctc i papAnu2.chr19 I 26 I 1232 s chlSab2.chr6 47535717 328 + 50890351 AGAAATTCACTCTCAACTACCCAGGATGCCTGAACACCTGTTTTCAAACACTCAAAGCAGGAAACGTTTTTGGGATTTT-GGGGAGGACAGGGTCTGGCTCTgctctgttgcccaggctggggtgcagtggtgccatcttggctctctgcaacctccaggtcccaggttcaagcgattctcatgtcttagcctcctgagtaacagggattacaggtgtgcgccaccacgcttggctaagtt---ttgta-------tttatagt-----------------------agaggcggcgtttcgacatgttagccaggctgg-------------------------------tctcgaacttctggcctcgagtgatccgtccacctcggcctc i chlSab2.chr6 I 26 C 0 s calJac3.chr22 45890137 306 + 49145316 AGAAATTCA--CTCAGTTACCCAGGATGCCTGAATATGTTTTCttg---------------------tttcgttgttttttttagagacagggttt-----caccatgttagccaggatgg-------------------------tcccgatctactgacctcagg--------atccgcctgcctcagcctcccaaaattctgggattacaggcatgagccactgcgcccagcaggattcacttataaagctgcttcactgt--------------------------gactggttgtggccacaatgcccaggctggagtacaatggtgccatcttgactcactgcaacctccagttcctgggttcgagtgattctcatgcctcagcctc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C a score=67054.000000 s hg38.chr19_GL949747v2_alt 569428 31 + 729520 ccaaagccatgggattacagatgtgagccac s panTro4.chr19 59844446 31 + 63644993 ccaaagccatgggattacagatgtgagccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56755616 31 + 60714840 ccaaagccatgggattacagacatgagccat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293249 31 - 106955855 ccaaagccatgggattacagacgtgagccac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60581126 31 + 64156825 ccaaagccatgggattacagatgtgagccac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55707292 31 + 59248254 ccaaagccatgggattacagatgtgagccac i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47536045 31 + 50890351 ccaaagccatgggattacagatgtgagccac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45890443 31 + 49145316 ctgagtatctgtgattacaggtgtgcaccac i calJac3.chr22 C 0 I 278 e canFam3.chr1 20009129 0 - 122678785 C e papAnu2.chr19 47822227 1232 + 51301725 I a score=3279.000000 s hg38.chr19_GL949747v2_alt 569459 2 + 729520 ag s panTro4.chr19 59844477 2 + 63644993 ag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56755647 2 + 60714840 gg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293280 2 - 106955855 ag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60581157 2 + 64156825 ag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55707323 2 + 59248254 ag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47536076 2 + 50890351 ag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e calJac3.chr22 45890474 278 + 49145316 I e papAnu2.chr19 47822227 1232 + 51301725 I a score=139436.000000 s hg38.chr19_GL949747v2_alt 569461 63 + 729520 cacccagtcAGAAAGGTTTTCTAAAAAGAAATTTAGACCCACACAATGGGGA-TCCTTATAAGT s panTro4.chr19 59844479 63 + 63644993 cacccagccAGAAAGGTTTTCTAAAAAGAAATTTAGACCCACACAATGGGGA-TCCTTATAAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56755649 60 + 60714840 cacccggccAGAAACGTTTTCTAAA---AAATTTAGACCCACACAATGGGGA-TCCTTGTAAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293282 63 - 106955855 cacccggccAGAAACGTTTTCTAAAAAGAAATTTAGATCCACACAAGGGGGA-TCCTTATAAGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60581159 63 + 64156825 cacccagccAGAAACATTTTCTAAAAAGAAATTTAGACCCACACAATGGGGA-TCCTTGTAAGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55707325 63 + 59248254 cacccagccAGAAACATTTTCTAAAAAGAAATTTAGACCCACACAATGGGGA-TCCTTGTAAGT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47536078 63 + 50890351 cacccagccAGAAACGTTTTCTAAAAAGAAATTTAGACACACACAATGGGGA-TCCTTATAAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45890752 64 + 49145316 cacccggcTGGAAACATTTTCTAAAAAAGAATTTAGATCCACACAATGAGAATTCCTTATAAGT i calJac3.chr22 I 278 C 0 e canFam3.chr1 20009129 0 - 122678785 C e papAnu2.chr19 47822227 1232 + 51301725 I a score=249104.000000 s hg38.chr19_GL949747v2_alt 569524 147 + 729520 CTAAGA----AAAAAAAGATTATggccaggcacggtgtctcgcacctgtagtcccagcactttgggaggccaaggcaggcagattgcttgagctccgcagttcaaggccagcctgggcaacacgg------------------------------------------------------------tgaaaccctgtctctacc--------aaaaatag s panTro4.chr19 59844542 147 + 63644993 CTAAGA----AAAAAGAGATTATggccaggcacggtgtctcgcacctgtagtcccagcgctttgggaggccaaggcaggcagattgcttgagctccacagttcaaggccagcctgggcaacacag------------------------------------------------------------tgaaaccctgtctctacc--------aaaaatag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56755709 147 + 60714840 CTAAGA----AAAAAAAGATTATggccaggcccggtgtctcacacctgtagtcccagcactttgggaggccaaggcaggcagatcgcttgagctcagcagttcaagaccagcctgggcaacacgg------------------------------------------------------------tgaaaccgtgtctctacc--------aaaaatac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293345 120 - 106955855 CTAAGA----AAAAAAAGATTATggccaggcccggtgtctcacacctgtagtcccagaactttgggaggccaagtcaggcagattgcttgagctcagcagttcaa--------------------------------------------------------------------------------------catgtc-cagct--------aaaaatac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60581222 141 + 64156825 CTAAGA----AAAAAGA--TTATggccaggcacggtgtctcacacctgtagtcccagcactttgggaggccaaggctggcggattgc--------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn---------------------------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55707388 145 + 59248254 CTAAGA----AAAAAGA--TTATggccaggcacggtgtctcacacctgtagtcccagcactttgggaggccaaggctggcagattgcttgagctcagcagttcaagaccagactgggcaacacag------------------------------------------------------------caaaaccctgtctctacc--------aaaaatac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47823459 153 + 51301725 ctaaaaatacaaaaaaa--t--tggccgggcgcggtggctcaagcctgtaatcccagcactttgggaggccgagacaggcggatcac--gaggtcaggagatcgagaccatcctggctaacacgg------------------------------------------------------------tgaaaccccgtctctactaaaaaaaaaaaaatac i papAnu2.chr19 I 1232 C 0 s chlSab2.chr6 47536141 144 + 50890351 CTAAGA----AAAAACAGCTTATggccaggcacggtgtctcacacctgtagtcccagcactttgggaggccaaggccggcagattgcttgagctcagcagttcaagacaagcctgggcaacacag------------------------------------------------------------cgaaaccctgtctct-----------aaaaatac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45890816 135 + 49145316 CTAAGA----AAAAAAG-ATTATGGCCAGGCACAG-----------tgtaattccagctctttgggaggctgcaggaggcagatcacttgagctcaggagttcaagacctgcccaggtaacacag------------------------------------------------------------tgaaatcctgcctctacc--------aaaactac i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C a score=732870.000000 s hg38.chr19_GL949747v2_alt 569671 451 + 729520 aaaaagttagccaggaatgg----------------------------------------------tggtgcacgcctatagtcccagctactcgggaggcggaggcaagaggatcacttgagcccaggaggcggaggttgcaacgagctagagattgccctactgcactccagcct-ggtaacagagtaaaacatgccttt-aaaaaataaatttaaaaaaTAGATAATCAggctggtgcacggtgactcacgcctataattccagcactttgggaggccgaggcgggcagatcacctgaggtcaggaattcgaga-------------------------------ccagcctggccaac-atagtgaaaccccgtctc------------tactaaaaatac--aaaaattagctgggcatggtggcagacaactgtaataccagctactcaggaggctgagacaggagaatcgctttgaacctgggaggcagatgttgcagtgagc-----------------------------------------------------------------------------------------------caataccgcaccactgtactgcagcccgggtgaca- s panTro4.chr19 59844689 447 + 63644993 aaaa----agccaggaatgg----------------------------------------------tggtgcacgcctatagtcccagctactcgggaggcggaggcaggaggatcacttgggcccacgaggcggaggtttcaacgagctagagattgccctactgcactccagcct-ggtaacagagtaaaacatgccttt-aaaaaataaatttaaaaaaCAGATAATCAggctggtgcacggtgactcacgcctataattccagcactttgggaggccgaggcgggcagatcacctgaggtcaggaattcgaga-------------------------------ccagcctggccagc-atagtgaaaccccgtctc------------tactaaaaatac--aaaaattagctgggcatggtggcagacaactgtaataccagctactcaggaggctgagacaggagaatcgctttgaacctgggaggcagatgttgcagtaagc-----------------------------------------------------------------------------------------------caatatcgcaccactgtactgcagcccgggtgcca- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56755856 448 + 60714840 aaaaagttagccaggaatgg----------------------------------------------tggtgcacgcctatagtcccagctactcgggaggctgaggcaggaggatcacttgagcccaggaggcagaggttgcaacgagctggagattgccctactgcactccagcctgggtaacagagtaaaacatgccttt-aaaaaataaatttaaaaaaTAGATAATCAggccggtgcacggtggctcacgcctataattccagcactttgggaggccaagacgggtggatcacctgaggtcaggaattcgaga-------------------------------ccagcctggccaac-atagtgaaaccccgtctc------------tactaaaaatac--aaaaattagctgggcgtggtggcagacaactgtaataccagctacttaggaggctgagacaggagaatcactttgaacctgggagaca----ttgcagtgagc-----------------------------------------------------------------------------------------------caatatcgcgccactgtactgcagcctgggtgaca- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60581363 450 + 64156825 --------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------gaggctgaggcaggaggatcacttgagcccaggaggcggaggttgcaacaagatagagattgccctactgcactccagcctgggtaacacagtaaaacatgtctttaaaaaaataaaTTTGAAAACTAGATAATCAggccggggcatggtggctcatgcctataatcccagcactttgggagactgaggcgggcagatcacctgagattgggagttcaaga-------------------------------ccagcctgaccaac-atggagaaacaccatctc------------tactaacaatacaaaaaaattagccaggcatggtggcccatgctcaccatcccagctactcaggaggctgaggcaggagaattgc-ctgaacccgggaggcagaggttgcagtgagc-----------------------------------------------------------------------------------------------taaaattgcaccacggcactccagcctgggtaaca- i rheMac3.chr19 C 0 I 700 s macFas5.chr19 55707533 452 + 59248254 aaaaagttaggcaggaatgg----------------------------------------------tgatgcatgcctatagtcccagctactcgggaggctgaggcaggaggatcacttgagcccaggaggcggaggttgcaacaagatagagattgccctactgcactccagcctgggtaacacagtaaaacatgtctttaaaaaaataaaTTTGAAAACTAGATAATCAggccggggcatggtggctcatgcctataatcccagcactttgggagactgaggtgggcagatcacctgaggtcaggagttcgaga-------------------------------ccagcctggccaac-atagtgaaaacccgtctc------------tactaaaaatac--aaaaattagctggttgtggtggcagacacctgaaataccagctactcaggaggctgagacatgagaatcactttgaacctgggaggtggacgttgcagtgagc-----------------------------------------------------------------------------------------------caatatcatgccactgtactgcaaccc-ggtgaca- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47823612 572 + 51301725 aaaaaactagccgggcgcag----------------------------------------------tggcgggcgcctgtagtcccaactactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagtttgcagtgagct-gagatccagccactgcactccagcctaggcggcagagcgagactccatctcaaaaaaaaaaattag------------------ccgggcatggtggcccatgctcgcaatcccagctactcaggaggctgaggcagaagaatcacttgaacctgggaggctgaggttgcagtgagcagagatcacaccattgccctctagcctgggcaataagagtgaaactccgtctcaaaaaagtaaaataaaataaatac--aaaaattagccaggcatgctggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaattgc-ttgaacccgggaggcagaggttgcagtgagcaggagaattgcttgaggcagTGTGAGAGAATTGCAGTGAGGCAGGATtgcagtgaggcaggagaattgcttgaacccgggaggcagaggttgcagtgagattgcaccactgcactccagcctgggcaaca- i papAnu2.chr19 C 0 I 25 s chlSab2.chr6 47536285 452 + 50890351 aaaaagttagccaggaatgg----------------------------------------------tggtgcatgcctatagtcccagctactcgggaggctgaggcaggaggatcacttgagcccaggaggtggaggttgcaacaagatggagattgccctactgcactccagcctgggtaacacagtaaaacatgtcttt-aaaaaataaaTTCGAAAACTAGATAATCAggccggggcatggtggctcatgcctataatcccagcactttgggagactgaggcgggcagatcacctgaggtcaggagttcaaga-------------------------------ccagcctggccaac-attgtgaaaacctgtctc------------tactaaaaatac--aaaaattagctggttgtggtggcagacacctgaaataccagctactcaggaggctgagacatgagaatcactttgaacctgggaggcagacgttacagtgagc-----------------------------------------------------------------------------------------------caatatcgtgccactgtactgcaacctgggtgaca- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45890951 408 + 49145316 aaaa----agccaggaatgg----------------------------------------------tagtacacacctatagtcccagctagtcaggaggctgagacagcaggatcacttaagcgcaggaggcagaggttgcaacgagctggagatggccctactgca-tttagcctgggtaaca-----aaATATGTCTTT-----------------------------Aggccggcgc--ggtggctcatgcctgtaatcccagcactttgggaggccgagacgggtggatcac--gaggttgaga--ttgaga-------------------------------ccatcctggtcaac-gtggtgaaacgccgtctc------------gactaaaaatac--aaaaattagctggtcacggtggcgcgtgcctgtagtcccagctactggggaggctgaggcaggagaattgc-ctgaacccaggaggtggaggttgcggtgagc-----------------------------------------------------------------------------------------------caagatcgcatcattgcactccagcctgggtaacaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C a score=20617.000000 s hg38.chr19_GL949747v2_alt 570122 14 + 729520 gagcgagactctgc s panTro4.chr19 59845136 14 + 63644993 gagcgagactctgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56756304 14 + 60714840 gagtaagactctgt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55707985 14 + 59248254 gagcaagactctgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47824209 14 + 51301725 gaaaaagactttgt i papAnu2.chr19 I 25 C 0 s chlSab2.chr6 47536737 14 + 50890351 gagcaagactctgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45891359 14 + 49145316 gagcaaaactccgt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C e rheMac3.chr19 60581813 700 + 64156825 I a score=4438.000000 s hg38.chr19_GL949747v2_alt 570136 3 + 729520 ctc s panTro4.chr19 59845150 3 + 63644993 ctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56756318 3 + 60714840 ctc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60582513 3 + 64156825 CTC i rheMac3.chr19 I 700 C 0 s macFas5.chr19 55707999 3 + 59248254 ctc i macFas5.chr19 C 0 I 606 s papAnu2.chr19 47824223 3 + 51301725 ctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47536751 3 + 50890351 ctc i chlSab2.chr6 C 0 I 631 s calJac3.chr22 45891373 2 + 49145316 ct- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C a score=21904.000000 s hg38.chr19_GL949747v2_alt 570139 14 + 729520 caaa--------------------taaataaata s panTro4.chr19 59845153 14 + 63644993 caaa--------------------taaataaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56756321 14 + 60714840 caaa--------------------taaataaata i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60582516 14 + 64156825 CAAA--------------------TAGATAAATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55708608 34 + 59248254 caaacaagaaaaaGACTCTGTCTCCAAATAAATA i macFas5.chr19 I 606 C 0 s papAnu2.chr19 47824226 14 + 51301725 caaa--------------------tagataaata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47537385 14 + 50890351 CAAA--------------------TAGATAAATA i chlSab2.chr6 I 631 C 0 s calJac3.chr22 45891375 14 + 49145316 caaa--------------------aaaaTATATA i calJac3.chr22 C 0 I 306 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C a score=1238589.000000 s hg38.chr19_GL949747v2_alt 570153 752 + 729520 aaaaaTAGTGGCAAATCAAACCTTCAGTAGAACTAAGAGAATGCCAGAGTGAACCCCAGGGTTAATGATAGCAAACTTGGCTCTAACGTGGCTGCAGCATGCAAGCCTGTGTATGTGAACATGAGGGGTGGTGAttgtggagacactggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacaatcctcccaccttggcctcccaaagGAGGAACTGAGGAATGAGAAAAGAAAT-ACGCCCCAAACATATGACATAAGAGACCACAGGGGGCTAGAGATTTGTCACCAATAGTCCTTGGTGGCATTACAGACCTCGGTCCCACCAACAAGAGAAGCATGACACTATTTAGCTCAAGTTTCATGATATACCCCTAAAACCTTAAcccatttatgccagaggttacaattatttgaactgcagac--gtgtgaaaaatcgt------------accttgagcaggatataaataactcccacatgcttagcgttccaataatgcaacactgggcatCATGAAGCAGTTTACATGCGTATCATCTCTACAACTAAAATAACTCTTGAATAAGACAAGTGggctgtgcacagtggctcacgcctgcaatccgggtactttgtgaggccaagacaggaggatcgtttgaagccaggagtttgagaa---cctcggcaacacggccacacagtgcagcagagcaaaacgttgtctcag---------------------------------------aaaagaaaa-------------gacaaaGGCAAGAAGAAACTAAAGGTAGATTACGTTA s panTro4.chr19 59845167 772 + 63644993 aaaaaTAGTGGCAAATCAAACCTTCAGTAGAACTAAGAGAATGCCAGAGTGAACCCCAGGGTTAGTGATAGCAAACTTGGCTCTAACGTGGCTGCAGCATGCAAGCCTGTGTATGTGAACATGAGGGGTGGTGAttgtggagacactggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacaatcctcccaccttggcctcccaaagAAGGAACTGAGGAATGAGAAAAGAAAT-ACGCCCAAAAC--ATGACATAAGAGACCACAGGGGGCTAGAGATTTGTCACCAATAGTCCTTGGTGGCATTACAGACCTCGGTCCCACCAACAAGAGAAGCATGACACTATTTAGCTCAAGTTTCATGATATACCCCTAAAACCTTAAcccatttatgccagaggttacaattatttgaactgcagac--gtgtgaaaaattgt------------accttgagcaggatataaataactcccacatgcttagcgttccaataatggaacactgggcatCATGAAGCAGTTTACATGCGTATCATCTCTACAACTAAAATAACTCTTGAATAAGACAAGTGggctgtgcacagtggctcacgcctgcaatcccggtactttttgaggccaagacaggaggatcgtttgaagccaggagtttgagaa---cctcggcaacatggccacacagtgccacagagcaaaacgttgtctcag-aaaagaaaa-----gaaaagaaaagaa-----------aaaagaaaa-------------gagaaagGCAAGAAGAAACTAAAGGTAGATTACGTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56756335 762 + 60714840 aaaaaTAGTGGCGAATCAAACCTTCAGTAGAACTAAGAGAATGCCAGAGTGAACCCCAGGGTTAATGAGAGCAAACTTGGCTCTAACGTGGCTGCAGCATGCAAGCCTGTGTATGTGAACATGAGGAGTGGTGAttgtagagacactggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacgat-ctcccaccttggcctccca---gagGAACTGAAGAATGAGAACAGAAAT-ACGCCCAAAACATGTGACATAAGAGACCACAGGGGGCTAGAGATTTGTCAACAATAGTCCTTGGTGGCATGACAGACCTCGGTCCCACCAGCAAGAGAAGCATGACACTATTGAGCTCAAGTTTCATGATATACCCCTAAAACCTTAAcccatttatgccagaggttacaattatttgaactgcagacatgtgtgaaaaatcctaccttggcaatgaccttgagcaggatataaataactcccacatgcttagcgttccaataatggaacactgggcatCATTAAGCAGTTTACATGTGTATCATCTCTACAGCTAAAATAACTCTTGAATAAGACAAGTGGgctgtgcacagtggctcacgcctgcaatctcagtactttgtgaggccaagacaggaggatcgtttgaagccaggagtttgagaa---ccttggcaacacagcCACACAGTGCAACAGAGCAAAACGTTGTCTCAG---------------------------------------AAAAGAAAA-------------GAGAAAGGCAAGAAGAAACTAAAGGTAGATTATGTTA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60582530 736 + 64156825 AAAACTAGTGGCAAATCAAACCTTCAGTAGAACTAAGAGAATGCCAGAGTGAACCCCAGGGTTAATCATAGCAAACGTGGCTCTAACATGATAGCGGCATGCAACCCTGTGCATGTGAACATGAGGGGTGGTCAttgtagaggcactggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacaatcctcccaccttggcctcccagagGAGGAACTGAGGAATGAGAACAGAAATAACATCCAAAACATATGACATAAGAGACCACA--GGGTTAGAGATTTGTCACCAATAGTCCTTGGTGGCATTACAGATCATGGTCCCACTAGCAAGAGAAGCATGACACTGTATAGCTGAACTTTCAT-ATATACCCCTAAAATCTTAAcccatttatgccagaggttacaattatttgaagtgcagacatgtgtgaaaaatcgtaccttgggaatgaccttgagcaggatataaataactcccacatgcttagcattccaataatggaacactagacatCGTTAAGCAGTTTAAATGCGTATCATCTCTACAACTA----AACTCTTGAACAAGACAAGTGggctgtgcacagtggctcacgcctataatcctagtgctttgtgaggccaagacaggaggatcgctcgaagccaggagtttgagaacagccttggcaacatagcTACATAGTACAGCAGAGCAAAACATTGTCTaaagaaaaggaaa-----------------------------agggccggg-------------------------------------------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55708642 808 + 59248254 AAAACTAGTGGCAAATCAAACCTTCAGTAGAACTAAGAGAATGCCAGAGTGAACCCCAGGGTTAATCATAGCAAACGTGGCTCTAACATGATAGCAGCACGCAACCCTGTGCATGTGAACATGAGGGGTGGTCAttgtagaggcactggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacaatcctcccaccttggcctcccagaggaggaactgagGAATGAGAACAGAAATAACATCCAAAACATATGACACAAGAGACCACA--GGGTTAGAGATTTGTCACCAATAGTCCTTGGTGGCATTACAGACCATGGTCCCACTAGCAAGAGAAGCATGACACTGTATAGCTGAACTTTCAT-ATATACCCCTAAAATCTTAAcccatttatgccagaggttacaattatttgaactgcagacatgtgtgaaaaatcgtaccttggcaatgaccttgagcaggatataaataactcccacatgcttagcattccaataatggaacactagacatCGTTAAGCAGTTTAAATGCGTATcatctctacaacta----aactcttgaacaagacaagtgggctgtgcacagtggctcacgcctataatcctagtgctttgtgaggccaagacaggaggatcgctcgaagccaggagtttgagaacagccttggcaacatagctacatagtacagcagagcaaaacattgtctcaagaaaaggaaaggacagaaaagggaaaagggtaag-----aggaaaggggaaagggaaaaa-gaaaaaggcaagaagaaaCT-GAGGTAGATTATGTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47824240 794 + 51301725 aaaactagTGGCAAATCAAACCTTCAGTAGAACTAAGAGAATGCCAGAGTGAACCCCAGGGTTAATCATAGCAAACGTGGCTCTAACATGACAGCAGCATGCAACGCTGTGCTTGTGAACATGAGGGGTGGTCATTGTAGAGGCACtggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacgatcctcccaccttggcctcccagaggagGAACTGAGGAATGAGAACAGAAAT-ACGTCCAAAACATATGACATAAGAGACCACA--GGGTTAGAGATTTGTCACCAATAGTCCTTGGTGGCATTACAGACCATGGTCCCACTAGCAAGAGAAACATGACACTGTATAGCTCAACTTTCATGATATACCCCTAAAACCTTAACTCATTTATGCCAGAGGTTACAATTATTTGAACTGCAGAC--GTGTGAAAAATCGtaccttggcaatgaccttgagcaggatataaataactcccacatgcttagcgttccaataatggaacactagacATCGTTAAGCAGTTTACATGCGTA-----TCTACAACTA----AACTCTTGAACAAGACAAgtgggctgtgcacagtggctcacgtctgtaatcctagtactttgtgaggccaacacaggaggatccctcgaagccaggagtttgagaacagccttggcaacatagctaCATAGTACAGCAGAGCAAAACATTGtctcaagaaaaggaaaggacagaaaagggaaaagggaaaggggaaagggaaaaa-------------gaaaaaggcaagaagaaact-gaggtagattatgtta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47537399 800 + 50890351 AAAACTAGTGGCAAATCAAACCTTCAGTAGAACTAAGAGATTGCCAGAGTGAACCCCAGGGTTAATCATAGCAAACATGGCTCTAACATGACAGCAGCATGCAACCCTGTGCATGTGAACATGAGGGGTGGTCAttgtagaggcactggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacgatcctcccaccttggcctcccagaggaggaactgagGAATGATAACAGAAAT-ACGTCCAAAACATATGACACAAGAGACCTCA--GGGTTGGAGATTTGTCACCAATAGTCCTTGGTGGCATTATAGACCATAGTCCCACTAGCAAGAGAAGCATGACACTGTATAGCTCAACTTTCATGATATACCCCTAAAATCTTAAcccatttatgccagaggttacaattatttgaactgcagacatgtgtgaaaaatcgtaccttgttaatgaccttgagcaggatataaataactcccacatgcttagcgttccaataacggaacactagacatCGTTAAGCAGTTTAAATGTGTATcatctcta----ta----aactcttgaacaagacaagtgggctgtgcacagtggctcacgcctataatcctagtactttgcgaggccaacgcaggaggatcgcttgaagccaggagtttgagaacagccttggcaacatagctacatagtacagcagagcaaaacattgtctcaggaaaaggaaa-----ggagagggaaaagggtaag-----gggaaaggggaaagggaaaaagaaaaaaggcaaGAAGAAACT-GAGGTGGACTATGtta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C a score=305368.000000 s hg38.chr19_GL949747v2_alt 570905 283 + 729520 AAATAAGTCACTGAggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcagatcacctgaggtcaggaattcgagaccagcctggccaacatagtgaaaccccatctctact-aaaaatac-aaaaaattagccaggcgtggtggcgggcgcct--------------------gtagtcccagctgctcgggaggctgaggcaggagaatggcgtgaacccgggaggtggagcttgcagtgagccgagatcgcaccgcttcactccagcctgggcgacagag s panTro4.chr19 59845939 282 + 63644993 AAATAAGTCACTGAggccgggcgcagtggctcacgcctgtaatctcagcactttgggaggccgaggcgggcggatcac--gaagtcaggagatcaagaccatcctggctaacacagcgaaaccccgtctctact-aaaaatacaaaaaaattagccgggcatggtggcgggcgcct--------------------gtagtcccagctgctcgggaggctgaggcaggagaatggcgtgaacccgggaggtggagcttgcagtgagccgagatcgcaccgcttcactccagcctgggcgacagag i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60583266 248 + 64156825 ---------------------cgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcac--aaggtcagcagatcgagac------------gacggtgaaaccccgtctctact-aaaaatac-aaaaaattagccgggcgcggtggcgggcgcct--------------------gtagtcccagctactcaggaggctgaggcaggagaatggcgtaaacccaggaggcggagcttgcattgagccgagatcgtgccactgcactccagcctgggcgacagag i rheMac3.chr19 C 0 I 413 s macFas5.chr19 55709450 275 + 59248254 AAATAAGTCATTGA-------Tgtggtggctcaagcctgtaaccccagcactctgggaggccgagacgggcagatcgc--aaggtcaggagatcgagaccaccctggctaacacggtgaaaccccgtctctactaaaaaatac-aaaaaactagccaggcgaggtggcgggcgcct--------------------gtagtcccagctactcaggaggctgaggcgggagaatggcatgaacccgggaggcggagcttgcagtgagctgagatctggccactgcactccagcctgggcgacacag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825034 274 + 51301725 aaataagtcattga-------tgcggtggctcaagcctgtaatcccagcactttgggaggccgagacgggcggatcat--gaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaaatac-aaaaaactagccgggcgtggtggcgggcgcct--------------------gtagtcccagctactcgggacgctgaggcgggagaatggcgtgaacccaggaggcagagcttgcagtgagctgagatccagccactgcactccagcctgggcgacaga- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47538199 295 + 50890351 aaataagttattga-------tgcagtggctcaagcctgtaattccagcactctgggaggccgagacgggcagatcgc--gaggtcaggagatcaagaccatcctggctaacacggtgaaaccccgtctctactaaaaaatac-aaaaaactagctgggcgaggtggcgggcgcctgtagtcccagctactcgggagtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagctgagatgcggccactgcactccagcgcgggcgacagag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56757097 0 + 60714840 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C a score=-4645.000000 s hg38.chr19_GL949747v2_alt 571188 65 + 729520 actggagtctctgtctcaaaaaaaagacagattcaaaaaaaaagaCAGACT----------CCGTCTCAAAAAAA s panTro4.chr19 59846221 75 + 63644993 actggagtctctgtctcaaaaaaaagacagattcaaaaaaaaagaCAGACTCAAAAAAAGACTGTCTCAAAAAAA i panTro4.chr19 C 0 C 0 s macFas5.chr19 55709725 2 + 59248254 -cg------------------------------------------------------------------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825308 22 + 51301725 acggga--ctccatctcaaaaaaa--------------------------------------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47538494 21 + 50890351 -caaga--ctccatctcaaaaaaa--------------------------------------------------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56757097 0 + 60714840 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C e rheMac3.chr19 60583514 413 + 64156825 I a score=3018.000000 s hg38.chr19_GL949747v2_alt 571253 5 + 729520 AGACT s panTro4.chr19 59846296 5 + 63644993 AGACT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60583927 5 + 64156825 agact i rheMac3.chr19 I 413 C 0 s macFas5.chr19 55709727 5 + 59248254 agact i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47538515 5 + 50890351 ataat i chlSab2.chr6 C 0 I 14 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56757097 0 + 60714840 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C e papAnu2.chr19 47825330 0 + 51301725 C a score=3899.000000 s hg38.chr19_GL949747v2_alt 571258 21 + 729520 CCGTCTCAAAAAAAAAATAAA s panTro4.chr19 59846301 20 + 63644993 CCATCTC-AAAAAAAAATAAA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60583932 18 + 64156825 ccgtctc-aaaaaaaaata-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55709732 18 + 59248254 ccgtctc-aaaaaaaaata-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825330 3 + 51301725 ----------------ata-- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56757097 0 + 60714840 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C e chlSab2.chr6 47538520 14 + 50890351 I a score=4633.000000 s hg38.chr19_GL949747v2_alt 571279 6 + 729520 AAATAC s panTro4.chr19 59846321 6 + 63644993 AAATAC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60583950 6 + 64156825 aaatta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55709750 6 + 59248254 aaatta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825333 6 + 51301725 aaataa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47538534 6 + 50890351 aaatta i chlSab2.chr6 I 14 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56757097 0 + 60714840 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C a score=900479.000000 s hg38.chr19_GL949747v2_alt 571285 545 + 729520 AAATAAGTCATTGAAAAGATATACACGGGTCACAACTAAGGGAGCATCTGTAGGACGATCTTCTGAAAAGCTAAGACCCAGGACAGCTCTGGGAACTACCTATTTTTGGATATAATGATTAGGGgtgtgtgtgtgtgtgtg--------tgtgtgtgtgtgtgtgCTCATGCACACACATACACACAAGCTTCCAGTCTGTACTCCAGGATGATTTAAACTCTCAGTATGCCTAGGACTAAGTGTTTTGGGGGAAA-GTTGGACAATATTCAATTCACAGAGCATTTTAGAAAAGTATCTAATTTTTAAATTATCTCCTAAGCTAGGAGTGTGCTATAGAAAGATGCCTTAAGTTGATCCCTACAAAGAGTACACACACTCCC-AAAAAA--A-CTCTTCTCTGCATGGGAAATTCACCATGTGAAACAGCCATCCCAGggccgagcacagtggctcacacctgtaatcccggcactttgagaggctgaggcaggtggatcacctgaggttggcagtttgagaccaacctgaccaacatggtgaaacccc-atctctac s panTro4.chr19 59846327 533 + 63644993 AAATAAGTCATTGAAAAGATATACATGGGTCACAACTAAGGGAGCATCTGTAGGACAATCTTCTGAAAAGCTAAGACCCAGGACAGCTCTGGGAACTACCTATTTTTGGATATAATGATTAGGG------------GTGTG--------TGTGTGTGTGTGTATGCTCATGCACACACATACACACAAGCTTCCAGTCTGTACTCCAGGATGATTTAAACTCTCAGTATGCCTAGGACTAAGTGTTTTGGGGGAAA-GTTGGACAATATTCAATTCACAGAGCATTTTAGAAAAGTATCTAATTTTTAAATTATCTCCTAAGCTAAGAGTGTGCTATAGAAAGATGCCTTAAGTTGATCCCTACAAAGAGTACACTCACTCCC-AAAAAA--A-CTCTTCTCTGCATGGGAAATTCACCATGTGAAACAGCCATCCCAGggccgggcacagtggctcacacctgtaatcccagcactttgagaggctgaggcaggtggatcacctgaggttgggagtttgagaccaacctgaccaacatggtgaaacccc-atctctac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56757097 505 + 60714840 AAATAAGTCATTGAAAAGATATACACAGTTCACAATTAAGGGAACATCTGTAGGACGATCTTCTGAAAAGCTAAGACCCAGGACAGCTCTGGGAACTACCTATTTTTGGATATAATGAT--------------------------------------------------TGCAAACACACACACACAAGCTTCCAGTCTGTACTCCAGGATGATTTAAACTCTCAGTATGCCTAGTACTAAGTGTTTTGGGGGGAATGTTGGACAATATTCAATTCACAGAGCATTTTAGAGAAGTATCTAATTTTTAAATTATCTCCTAAGCTAGGAGTGTGCTATAGAAAGATGCCTTAAGTTGATCCCTACAAAGAGTGCACCCACTCCC-AAAAAA--AGCTCTTCTCTGCATGTGAAATTCACCATGTGAAACAGCCATCCCAGggccgggcacagtggctcacacctgtaatcccagcattttgagaggctgaggcaggtggatcacctgaagttgggagtttgagaccaacctgaccaacatggtgaaacccc-atctctac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60583956 535 + 64156825 aaataaGTCATTGAAAAGATATACATGGTTCACAATTAAGGGAACATCTGTAGGATGATTTTCTGAAAAGCTAAGACCCAGGACAACTCTGGGAACTACCTATTTTTGGATGTAGTGATGAGGG------------GGGTG--------TGTGTGCGTGTGTACGCTCATGCACACACATACACTCAAGCTTCCAGTCTGTACTCCAGGATGATTTAAACTGTCAGTATGCCAAGTACTAAGTGTTTGGGGGGAAT-GTTGGACAATATTCAATTCACAGAGCATTTTACAGAAGTATCTAATTTTTAAATTATCTCCTAAGCTAGGAGTGTGCTATAGAAAGATGCCTTAAGTTGATTCCTACAAAGAGTGCACCCACTCCC-AAAAAACCA-CTCTTCTCTGCATGGGAAATTCACCATGTGAAACAGCCATCCCAGggctgggtgtggtggctcacacctgtaatcccagcactttgaggggctgaggcgggtggatcacctgaggttgggagtttgagaccaacctgaccaacatagtgaaaccct-gtttctac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55709756 535 + 59248254 aaataaGTCATTGAAAAGATATACATGGTTCACAATTAAGGGAACATCTGTAGGATGATCTTCTGAAAAGCTAAGACCCAGGACAACTCTGGGAACTACCTATTTTTGGATGTAGCGATGAGGG------------GGGTG--------TGTGTGCGTGTGTACGCTCATGCACACACATACACTCAAGCTTCCAGTCTGTACTCCAGGATGATTTAAACTGTCAGTATGCCAAGTACTAAGTGTTTGGGGGGAAT-GTTGGACAATATTCAATTCACAGAGCATTTTACAGAAGTATCTAATTTTTAAATTATCTCCTAAGCTAGGAGTGTGCTATAGAAAGATGCCTTAAGTTGATTCCTACAAACAGTGCACCCACTCCC-AAAAAACCA-CTCTTCTCTGCATGGGAAATTCACCATGTGAAACAGCCATCCCAGggctgggtgtggtggctcacacctgtaatcccagcactttgaggggctgaggcgggtggatcacctgaggttgggagtttgagaccaacctgaccaacatagtgaaaccct-gtttctac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825339 535 + 51301725 aaataagtcatttaaaaGATATACATGGCTCACAATTATGGGAACATCTGTGGTACGATCCTCTGAAAAGCTAAGACCCAGGACAGCTCTGGGAACTACCTATTTTTGGATGTAGCGAtgaggg------------gggtg--------tgtgtgcatgtgtgcgtgtgtacgCTCATGTACACACAAGCTTCCAGTCTGTACTCCAGGATGATTTAAACTGTCAGTATGCCAAGTACTAAGTGTTT-GGGGGAAT-GTTGGACAATATTCAATTCACAGAGCATTTTAGAGaagtatctaatttttaaattatctcctAAGCTAGGAGTGTGCTATAGAAAGATGCCTTAAGTTGATTCCTACAAAGAGTGCACCCACTTCC-AAAAAACCA-CTCTTCTCTGCATGGGAAATTCACCATGTGAAACAGCCATCCCagggctgggtgtgttggctcacacctgtaatcccagcactttgaggggctgaggcaggtggatcacctgaggttgggagtttgagaccaacctgaccaacatagtgaaaccctggtctctac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47538540 538 + 50890351 aaataaGTCATTTAAAAGATATACATGGTTCACAATTACGGGAACATCTGTGGGATGATCTTCTGAAAAGCTAAGACCCAGGACAACTCTGGGAACTACCTATTTTTGGATGTAGTGATGAGGG------------GGCTGTGTGTGCATGTGTGCGTGTGTACGCTCATGCACACACATACACACAAGCTTCCAGTCTATACTCCAGGATGATCTAAACTGTCAGTAAGCCAAGTACTAAGTGTTG-GGGGGAAC-GTTGGACAATATTCAATTCACAGAGCATTTTAGAGAAATATCTAATTTTTAAATTATCTCCTAAGCTAGGAGTGTGCTACAGAAAGATGCC-----TTGATTCCTACAAACAGTGCACCCACTCCCAAAAAAAATA-CTCTTCTCTGCATGAGAAATTCACCATGTGGAACAGCCATCCCAGggccgggtgtgttggctcacacctgtaatcccagcactttgaggggctgaggcaggtggatcacctgaggttgggagtttgagaccaacctgaccaacatagtgaaaccct-gtctctac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C a score=95115.000000 s hg38.chr19_GL949747v2_alt 571830 45 + 729520 taaaaacta-----caaaaattggccaggtgcagtggctcatgcctgtaa s panTro4.chr19 59846860 45 + 63644993 taaaaacta-----caaaaattggccaggtgccgtggctcatgcctgtaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56757602 45 + 60714840 taaaaacta-----caaaaattggccaggtgccgtgactcatgcctgtaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60584491 45 + 64156825 tgaaaacta-----caaaaattggccaggtgcagtggctcatgcctgtaa i rheMac3.chr19 C 0 I 274 s macFas5.chr19 55710291 45 + 59248254 tgaaaacta-----caaaaattggccaggtgcagtggctcatgcctgtaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825874 45 + 51301725 taaaaacta-----caaaaattggccaggtgtagtggctcatgcctgtaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539078 45 + 50890351 taaaaacta-----caaaaattgaccaggtgcagtggctcatgcctgtaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45891695 50 + 49145316 TAAAAACAAAGTGGCAAATCATGGCCATTTgtggtggttcacacctataa i calJac3.chr22 I 306 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C a score=251833.000000 s hg38.chr19_GL949747v2_alt 571875 161 + 729520 tcccagcactttgcgaggccaaggcgagaagatcacctgaggtcaggagctcaagaccagcctggccaacatggcaaaaccccatctctactaaaaatacaaaaattagctgggtgtggtggcga-gcgactgtaatcctagctactcaggaggctgaggca s panTro4.chr19 59846905 161 + 63644993 tcccagcactttgggaggccaaggcgagaagatcacctgaggtcaggagctcgagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagctgggtgtggtggcga-gcgactgtaatcctagctactcaggaggctgaggca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56757647 161 + 60714840 tcccagcactttgggaggccaaggcgagaagatcacctgaggtcaggagctcgagaccagcctggccaacatggcaaaacaccgtctctactaaaaatacaaaaattagctgggcgtggtggcgg-gcgcctgtagtcctagctactcgggaggctgaggca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55710336 161 + 59248254 ctccagcactttggaaggccaaggcaggcagatcacctgaggtcaggagctcaagaccagcctggccaatatggtgaaaccctgtctctactaaaagtacaaaaattagtcgggcgtggtggcaa-gcaactgtaatcccagctactcaggaggctgaggca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825919 147 + 51301725 ctccagcactttggaaggccaaggcaggcagatcacctgaggtcaggagctcaagacca--------------gtgaaaccctgtctctactaaaagtacaaaaattagccgggcgtggtggcaa-gcgactgtaatcccagctactcaggaggctgaggca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539123 161 + 50890351 tcccagcactttagaaggccaaggcaggcagatcacctgaggtcaggagctcaagaccagcctggccaatatggtgaaatcccgtctctactaaaaatacaaaaattagccaggcgtggtggcaa-gcgactgtaatcccagctactcaggaggctgaggca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45891745 156 + 49145316 tcccagcactttggg------aggcaggaggatctcatgaggtcatgagttcgagatcagcccaaccaacatggtaaatccccgtctgtactaaaaatacaaacattagctgggtgtggtggcaaggggactgtaatcgcagctactcaggaggctgaggca i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C e rheMac3.chr19 60584536 274 + 64156825 I a score=27749.000000 s hg38.chr19_GL949747v2_alt 572036 28 + 729520 ggagaatcacttgaacccaggaggcaga s panTro4.chr19 59847066 28 + 63644993 ggagaatcacttgaacccaggaggcaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56757808 28 + 60714840 ggagaatcacttgaacccaagaggtgga i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55710497 28 + 59248254 ggaaaatcacttgaacccagggagcgga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47826066 28 + 51301725 ggaaaatcgcttgaacccagggagcgga i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45891901 21 + 49145316 ggagaatcgcttaaacccagg------- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C e chlSab2.chr6 47539284 0 + 50890351 C e rheMac3.chr19 60584536 274 + 64156825 I a score=91280.000000 s hg38.chr19_GL949747v2_alt 572064 217 + 729520 ggttgcactgagccgagatagcgccactgcactccagcctgggggacagagagagactctgtctt----------------aaaaaaaaaaaaaaaaaaaattagccagctgtggtggtgtgtacctgtaatcccagctactcaggaggttgaggcaggaaaatcgcttcaacctgtgagaaggaggctgcagtgagtcaagatcgcgccactgcactccagcctgggcaac--a s panTro4.chr19 59847094 235 + 63644993 ggttgtactgagccgagatagcgccactgcactccagcctgggcgacagagagagactctgtctttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaattagccagctgtggtggtgtgtacctgtaatcccagctactcaggaggttgaggcaggaaaattgcttcaacctgtgagaaggaggctgcagtgagtcaagatcgcgccactgcactccagcctgggcaacaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56757836 217 + 60714840 ggttgcactgagctgagatagcgccactgcactccagcctgggcgacagagagagactctgtctt--------------aaaaaaaaaaaaaaaaaaaaaattagccagctgtggtg--gtgtacctgtaatcccagctactcaggaggttgaggcagaaaaatcgtttcaacctgtgagacagaggctgcagtgagtcaagatcgcgccactgcactccagcctgggcgac--a i ponAbe2.chr19 C 0 I 6 s calJac3.chr22 45891922 217 + 49145316 --ttacagtgagctgagctagagccactgcattctaggctgggcaacagagtgagatttcatctc-------------agaaTACATATTATACACAAAAATTAgccaggcgtggtgctgcgtacctgtaatcccagctacagaggaggctga-gcaggagaatcacttgaacttgtgaagtaggggctgcagtgagtcaagactgcaccactgcactccagcctgggcaac--a i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C e chlSab2.chr6 47539284 0 + 50890351 C e papAnu2.chr19 47826094 0 + 51301725 C e macFas5.chr19 55710525 0 + 59248254 C e rheMac3.chr19 60584536 274 + 64156825 I a score=2801.000000 s hg38.chr19_GL949747v2_alt 572281 11 + 729520 --gtgagactcca s panTro4.chr19 59847329 11 + 63644993 --gtgagactcca i panTro4.chr19 C 0 C 0 s calJac3.chr22 45892139 13 + 49145316 gagcgagactcca i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56758053 6 + 60714840 I e nomLeu3.chr10 103293465 0 - 106955855 C e chlSab2.chr6 47539284 0 + 50890351 C e papAnu2.chr19 47826094 0 + 51301725 C e macFas5.chr19 55710525 0 + 59248254 C e rheMac3.chr19 60584536 274 + 64156825 I a score=61169.000000 s hg38.chr19_GL949747v2_alt 572292 143 + 729520 tcccaaaaagcaaaaaccaaaaaggccgggtgcaatggctcacctctgtaatcccaccactttgggaggccgaggcaggtggctcacctgaggtcaggagttcaagactagcctggccaacatggtgaaacccctctctacta s panTro4.chr19 59847340 140 + 63644993 tcccaaaaagcaaaaaccaaaaaggccgggtgcaatggttcacctctgtaatc---ccactttgggaggccgaggcaggtggctcacctgaggtcaggagttcaagactagcctgggcaacatggtgaaacccctctctacta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56758059 143 + 60714840 tcccaaaaagcaaaaaacaaaaaggccgggtgcaatggctcacatctgcaatcccaccactttgggaggccaaggcaggtggctcacctgaggtcaggagttcaagactagcctggccaacatggtgaaacccctctctacta i ponAbe2.chr19 I 6 I 7 s calJac3.chr22 45892152 131 + 49145316 tcccaaaaaggaaaaaa-aaaaagtccaggtacaatggctcatgtctgtaatcccagcactttggaaggccaagataggtggctcacccgaggtcaggagttc-agaccagcctggccaagatggtgaaatac---------- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C e chlSab2.chr6 47539284 0 + 50890351 C e papAnu2.chr19 47826094 0 + 51301725 C e macFas5.chr19 55710525 0 + 59248254 C e rheMac3.chr19 60584536 274 + 64156825 I a score=29696.000000 s hg38.chr19_GL949747v2_alt 572435 61 + 729520 aaaaattagccaggcgtggtggcaggcatctgtaattccagctacttgggagg-ccaaggtg s panTro4.chr19 59847480 61 + 63644993 aaaaattagccaggcgtggtggcaggcatctgtaattccagctacttgagagg-ccaaggtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103293465 61 - 106955855 aaaaattagccgggcgtggtggcaggcatctgtaatcccagctacttgggagg-ccaaggtg i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45892283 62 + 49145316 agaaattagctggatgtggtagtaggcacctgtaatcccagctacttgggaggcccaaggtg i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56758202 7 + 60714840 I e chlSab2.chr6 47539284 0 + 50890351 C e papAnu2.chr19 47826094 0 + 51301725 C e macFas5.chr19 55710525 0 + 59248254 C e rheMac3.chr19 60584536 274 + 64156825 I a score=22225.000000 s hg38.chr19_GL949747v2_alt 572496 28 + 729520 ggagaatcgcttgaacccaggaggtggg s panTro4.chr19 59847541 28 + 63644993 ggagaatcgcttgaacccaggaggtggg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103293526 28 - 106955855 ggagaatcgcttgaacccaggaggtgga i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47539284 28 + 50890351 agaaaatcgcttgaacccagggggtgga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45892345 28 + 49145316 ggagaattgcttgaacccgggacatgga i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56758202 7 + 60714840 I e papAnu2.chr19 47826094 0 + 51301725 C e macFas5.chr19 55710525 0 + 59248254 C e rheMac3.chr19 60584536 274 + 64156825 I a score=36775.000000 s hg38.chr19_GL949747v2_alt 572524 23 + 729520 ggttgcagtgagccaagatcgca s panTro4.chr19 59847569 23 + 63644993 ggttgcagtgagccaagatcgca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103293554 23 - 106955855 ggttgcattgagccaagatcgca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55710525 23 + 59248254 gcttgcagtgagccgagatcgca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47826094 23 + 51301725 gcttgcagtgagccgagatcgca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539312 23 + 50890351 gcttgcagtgagccgagatcgta i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45892373 23 + 49145316 ggttccagtgagctgagatcata i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56758202 7 + 60714840 I e rheMac3.chr19 60584536 274 + 64156825 I a score=59766.000000 s hg38.chr19_GL949747v2_alt 572547 64 + 729520 ccactgcactccagcctgggctacaagaacaaaactcc--atctcaaaaaaaaaaaa-gaaaaagaa s nomLeu3.chr10 103293577 67 - 106955855 ccactgcactccagactgggctgcaagaacaaaactccccatctcaaaaaaaaaaaaagaaaaagaa i nomLeu3.chr10 C 0 I 8 s macFas5.chr19 55710548 64 + 59248254 ccactgcactccagcctgggctacaagagcgaaactcc--gtctcaaaaaaaaaaaaaaaaaaaaa- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47826117 64 + 51301725 ccactgcattccagcttgggttacAAGAGGgaaattcc--ttttcaaaaaaaaaaaaaaaaaaaga- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539335 64 + 50890351 ccactgcactacagcctgggctacaagagcgaaactcc--atctcaaaaaaaaaaaaagaaaaaat- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45892396 63 + 49145316 tcactgcactccggcctaggctacaagagagaaactct--attaaaaaaaaaaaaaaaaaaggaa-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56758202 7 + 60714840 I e rheMac3.chr19 60584536 274 + 64156825 I e panTro4.chr19 59847592 0 + 63644993 C a score=4242.000000 s hg38.chr19_GL949747v2_alt 572611 4 + 729520 --------aaaa s ponAbe2.chr19 56758209 4 + 60714840 --------aaaa i ponAbe2.chr19 I 7 C 0 s nomLeu3.chr10 103293652 4 - 106955855 --------aaaa i nomLeu3.chr10 I 8 C 0 s macFas5.chr19 55710612 4 + 59248254 --------aaag i macFas5.chr19 C 0 I 14 s papAnu2.chr19 47826181 4 + 51301725 --------aaaa i papAnu2.chr19 C 0 I 9 s chlSab2.chr6 47539399 4 + 50890351 --------acaa i chlSab2.chr6 C 0 I 2 s calJac3.chr22 45892459 12 + 49145316 agaaatacaaaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e rheMac3.chr19 60584536 274 + 64156825 I e panTro4.chr19 59847592 0 + 63644993 C a score=249869.000000 s hg38.chr19_GL949747v2_alt 572615 106 + 729520 attagctggacatgttggcatgcctctaggcccagctactcatgaggctgaggcatgagaattgcttgaacctgggaggcagaggttgcggtgagccaagattgcg s ponAbe2.chr19 56758213 106 + 60714840 attagccgggcatggtggcaggcctctaggcctagctactctggaggctgaggcaggagaattgcttgaacctgggaggcagaggttgtggtgagccaagatcgcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293656 106 - 106955855 attagctggacatgttggcatgcctctaggcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggcggaggttgcagtgagccaagatctcg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60584810 106 + 64156825 attagctggacatgctggcgtgcctgtaggcccagctactcaggaggctgaggcaggagaattgcttgaacttgggaggcggaggttgcagtgagcctagatcgcg i rheMac3.chr19 I 274 C 0 s macFas5.chr19 55710630 106 + 59248254 attagctggacatgctggcgtgcctgtaggcccagctactcaggaggctgaggcaggagaattgcttgaacttgggaggcggaggttgcagtgagccaagatcgcg i macFas5.chr19 I 14 C 0 s papAnu2.chr19 47826194 106 + 51301725 attagctggacatgctggcgtgcctgtaggcccagttattcaggaggctgaggcaggagaattgcttgaacttgggaggcgggggttgcggtgagccaagatcgcg i papAnu2.chr19 I 9 C 0 s chlSab2.chr6 47539405 106 + 50890351 attagctggacatgctggcatgcctgtaggcccagctactcaggaggctgaggcaggagaattgcttgaacttgggaggcggaggttgcggtgagccaagatcgcg i chlSab2.chr6 I 2 C 0 s calJac3.chr22 45892471 106 + 49145316 attagctgggcgtgctggcacacctgtaggcccagctactcaggaggctgaggcaggagaattgcctgaacctgggaggcagaggttgcagtgagccaagatcaca i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e panTro4.chr19 59847592 0 + 63644993 C a score=141212.000000 s hg38.chr19_GL949747v2_alt 572721 85 + 729520 ccactgcactccagcctgaatgacagagcacgactccatctcaaaaaaacaaaaacaaaaaaacaaaacaaaACAAAAAA--CCCAT s panTro4.chr19 59847592 77 + 63644993 ccactgcactccagcctgaatgacagagcaagactccatctcaaaaaaacaaaa---------caaaacaaaacaaaaAAA-CCCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56758319 80 + 60714840 tcactgcactccagcctgagtgacagagcaagactccatctc---aaaacaaaaacaaaaa--caaaaacaaaaaaaaaa--cCCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293762 84 - 106955855 ccattgcactccagcctgggtgacagagcaagactccatttc---aaaacaaaaaacaaaaacaaaaaacaaaCAAAAAAACACCAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60584916 61 + 64156825 ccactgcactccggcctgggtgacagagcaagactccatgtc------------------------aaaaaaaaaaaaaa--GCCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55710736 67 + 59248254 ccactgcactccggcctgggtgacagagcaagactccatgtc----------aaa--------aaaaaaaaaaaaaaaaa--GCCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47826300 74 + 51301725 ccactgcattccggcctgggtgacagagcaagactccatgtc---aaaaaaaaaa--------aaaaaaaaaaaaaaaaa--gccat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539511 60 + 50890351 ccactgcactccggcctgggtgacagagcaagactccatgtc-------------------------aaaaaaaaaaaaa--GCCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45892577 57 + 49145316 ccactgcactccagcctgcgtgacagagcaagactccgtctc----------------------------aaacaaaaaa--GCTAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C a score=730831.000000 s hg38.chr19_GL949747v2_alt 572806 198 + 729520 ACCTGAGTATCTTCAAGGATCCAGTTCTTTGTCTTAGAACCCCAAAGAGCTTAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGAGGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAACCC s panTro4.chr19 59847669 198 + 63644993 ACCTGAGTGTCTTCAAGGACCCAGTTCTTTGTCTTAGAACCCCAAAGAGCTTAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGAGGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAACCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56758399 198 + 60714840 ACCTGAGTGTCTTCAAGCATCCAGTTCTTTGTCTTAGAACCCCAAAGAGCTTAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGAGGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAACCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293846 198 - 106955855 ACCTGAGTGTCTTCAAGGATCCAGTTCTTTGTCTTAGAACCCCAAAGAGCTTAATTATGCCGCTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGATGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCACAGGCTGTTGAGGAAGAACATGGAAACCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60584977 198 + 64156825 ACCTGAGTGTCTTCAAGGATCCAGTTCTTTGTCTTAGAACCCTAAAGAGCTGAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGATGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAACCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55710803 198 + 59248254 ACCTGAGTGTCTTCAAGGATCCAGTTCTTTGTCTTAGAACCCTAAAGAGCTGAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGATGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAACCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47826374 198 + 51301725 accTGAGTGTCTTCAAGGATCCAGTTCTTTGTCTTAGAACCCTAAAGAGCTGAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGATGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAACCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539571 198 + 50890351 ACCTGAGTGTCTTCAAGGATCCAGTTCTTTGTCTTAGAACCCTAAAGAGCTGAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGATGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAACCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45892634 198 + 49145316 ACCTGAGTGTCTTCAAGGATCCAGGTCTTTGTTTTAGAACCCCAAGGAGCTTAATGATGCCACTTT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCCAGCTTCTGATTGCTGATGAGAGCAGATCCAAGATGTTGGCAATAGAAAGGCAGAAGGGAGCAGCTCCAGAGGCTGTTGGGGAAGAACATGGAAACCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20009129 197 - 122678785 ACCTGAGTATCTTTAGGGGGCCA--TTATTGTTTTAAAACCTCAAAGAGCACCATTATTCCACTCTGCCCTCAAGATATTCTGTCCTAGGTCCAGAGTTTCTAGCCACTGAATGCTGTTGAGAACAGGTGCGAGACCCTGACAACAGGAGGGAGTGATGGAATAGCCATAGAGCCTGTAGGGAAAGAGCACAGAAAACC i canFam3.chr1 C 0 I 1851 a score=396243.000000 s hg38.chr19_GL949747v2_alt 573004 134 + 729520 ACGCATTCACTGAGCAGGTAg-------------tggctcacgcgtgtaatcccaacacttcgggaggccaaggcgggtggatcacttgaggccaggtgttcgagaccagccttgccaacacggtcaaaccccatctctactaaaaa s panTro4.chr19 59847867 134 + 63644993 ACGCATTCACTGAGCAGGTAg-------------tggctcacgcgtgtaatcccaacacttcgggaggccaaggcgggtggatcacttgaggccaggtgttcgagaccagccttgccaacacggtcaaaccccatctctactaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56758597 134 + 60714840 ACGCATTCACTGAGCAGgtgg-------------tggctcacgcctgtaatcccaacacttcgggaggccaaggcgggtggatcacttgaggccaggggttcgagaccagccttgccaacatggtcaaaccccatctctactaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103294044 134 - 106955855 ACACATTCACTGAGCAGGTAg-------------tggctcacacctgtcatcccaacactttgggaggccaaggcgggtggatcacttgaggccaggggttcgagaccagccttgccaacatggtcaaaccccatctctaataaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60585175 147 + 64156825 GTGCATTCACTGAGCAGGTAGTggccagatgccatggctcatgtctgtaatcccaacacttcaagaggccaaggcaggtggatcacttgaggccaggagctcgaaaccagccttgccaacatggtcaaaccccatctctattaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55711001 147 + 59248254 GTGCATTCACTGAGCAGGTAGTggccagatgccatggctcatgtctgtaatcccaacacttcaagaggccaaggcaggtggatcacttgaggccaggagctcgaaaccagccttgccaacatggtcaaaccccatctctattaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47826572 147 + 51301725 GTGCATTCACTGAGCAGGTAGTGGCCAGatgccatggctcatgtctgtaatcccagcacttcaagaggccaaggcaggtggatcacttgaggccaggagctcgaaaccagccttgccaacatggtcaaactccatctctattaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539769 147 + 50890351 ATGCATTCACTGAGCAGGTAGTggccagatgccatggctcatgtctgtaatcccaacacttcaagaggccaaggcaggtggatcacttgaggccaggagctcgaaaccagccttgccaacatggtcaaaccccatctttattaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45892832 145 + 49145316 ATGCATTCACTGAGCAGGTAGGggccggatgccgtggctcacgcctgtaatcccagcactttgggaggcggaggcaggcggatcacctgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctct--taaaaa i calJac3.chr22 C 0 I 29 e canFam3.chr1 20009326 1851 - 122678785 I a score=1031913.000000 s hg38.chr19_GL949747v2_alt 573138 459 + 729520 tacaaagattaggcagggcgtggggacagacacctgtagccccagca-ccttgggaggccgaggagggtggatcacctgaggtcaggagttcgagaccagccaggccaacatggcaaaaccccatctctacaaaaaattagccatgcatggtgttgtgtgcctttaatgccagctacttgggaggctgaggcacaagaatcgcttcagcctgggaggcggaggttacagtgagccaagatcgcaccactgcactccagcctgggcaatagaatgagactccatctcacaaatatataacataaaatgaaaatacaaaaattagccaggtatggtggagccacctataattccagctactcga------gaggcaggagaatcgcctgaa-cca--ggaggcagaggttgtagttagccaacatatcaccactgcattccagcttgggtgaaagagtgagacttggtctc s panTro4.chr19 59848001 459 + 63644993 tacaaagattaggtagggcgtggggacagacacctgtagccccagca-ccttgggaggccgaggagggtggatcacctgaggtcaggagttcgagaccagccaggccaacatggcaaaaccccatctctacaaaaaattagccatgcatggtggtgtgtgcctttaatgccagctacttgggaggctgaggcacaagaatcgcttcagcctgggaggcggaggttacagtgagccaagatcgcgccactgcactccagcctgggcaacagaatgagactccatctcacaaatatataacataaaatgaaaatacaaaaattagccaggtatggtggagccacctataattccaggtactcga------gaggcaggagaatcacctgaa-cca--ggaggcagaggttgtagtgagccaacatatcaccactgcattccagcttgggtgaaagagtgagacttggtctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56758731 458 + 60714840 tacaaagattaggcagggtgtgggggtaggcacctgtagccccagca-ccttgggaggccgaggagggtggatcacctgaggtcaggagttcgagaccagccaggccaacatggcgaaaccccatctctacaaaaaattagccgtgcatggtggtgtgtgcctttaatgccagctacttgggaggcggaggcacaagaatcgcttcagcctgggaggcggaggttacagtgagccaagatcgcgccactgtactccagcctgggcaacagaatgagactccatctcacaaatatataaaataaaatg-aaatacaaaaattagccaggtatgctggcaccacctgtaattccaactactcaa------gaggcaggagaatcgcttgaa-cca--ggaggcagaggttgtagtgagccaagatatcaccactgcattccagcttgggtgaaagagtgagacttggtctc i ponAbe2.chr19 C 0 I 6 s nomLeu3.chr10 103294178 460 - 106955855 tacaaagattaggcagggcgtggggacaggcacctgtagccccagcattcttgggaggcagaggagggtggatcacctgaggtcaggagttcgagaccagccaggccaacatggcgaaaccccatctctacaaaaaattagccatgcatggtggtgtgtgcctttaatgccagctacttgggaggctgaggcacaagaatcgcttgagcctgggaggcggaggttacggtgagccaagatcacgccactgcactccagcctaggcaatagaatgagactccatctcacaaatatataaaat-aaatgaaaatacaaaaattagccaggtatagtggcgccacctgtaattccaactactcaa------gaggcaggagaatcgcttgaaccca--ggaggcagaggttgtagtgagccaacgtatcatcactgcattccagcttgggtgaaagagtgagacttggtctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60585322 462 + 64156825 tgcaaagatgaggcagggtgtggaggcaggcacctgtaatcccagca-ccttgggaggctaaggaaggtggatcacctgagttcaggagtttgagaccagccaggccaacatggtgaaaccccatctctacaaaaaattagccacacatggtggtgagtgcctttaatgccagctacttgggaaggtgaggcacaagaatcactggagcctgggaggcagaggttgcagtgagccaagatcgtgccactgcactccagcctgggcaacagagtgaaactccatctcataaataaat-acataaaacgaaaatacaaaaattagccaggtatggtgttgccacctgtcattccaactactcgagaggctgaggcaggagaattgcttgaaccca--ggaggcagaggttgtagtgagccgacatatcaccactgcactgcagcttgggtggaagagtgagactcggt--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55711148 467 + 59248254 tgcaaagatgaggcagggtgtggaggcaggcacctgtaatcccagca-ccttgggaggctaaggaaggtggatcacctgagttcaggagtttgagaccagccaggccaacatggtgaaaccccgtctctacaaaaaattagccacacatggtggtgagtgcctttaatgccagctacttgggaaggtgaggcacaagaatcactggagcctgggaggcagaggttgcagtgagtgaagatcatgccactgcactccagcctgggcaacagagtgaaactccatctcataaataaat-acataaaacgaaaatacaaaaattagccaggtatggtgttgccacctgtcattccaactgctcgagaggctgaggcaggagaattgcttgaacccaggggaggcagaggttgtagtgagccgagatcacaccactgcactccagcctgggcaacagagtgaaactccatctc i macFas5.chr19 C 0 I 13180 s papAnu2.chr19 47826719 465 + 51301725 tgcaaagatgaGGCAGGGTGTgaaggcaggcacctgtaatcccagca-ccttgggaggctaaggaaggtggatcacctgagttcaggagtttgagaccagccaggccaacatggtgaaaccccatctctacaaaaaattagccacgcatggtggtgagtgcctttaatgccagctacttgggaaggtgaggcacaagaatcactggagcctgggaggcagagattgcagtgagcgaagatcgtgccactgcactccaggctgggcaacagagtgaaactccatctcataaataaat-ccatacaatgaaaatacaaaaattagccaggtatggtgtagCCACCTGTCATTCCAACTAGTcaagacgctgaggcaggagaattgcttgaaccca--ggaggcagaggttgtagtgagccaacatatcaccactacactgcagcttgggtggaagagtgagactcggtctc i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47539916 465 + 50890351 tgcaaagatgaggcagggtgtggaggcaggcacctgtaatcccagca-ccttgggaggctaaggaaggtggatcacctgagttcaggagtttgagaccagccaggccaacatagtgaaaccccatctctacaaaaaattagccacgcatggtggtgagtgcctttaatgccagctacttgggaaggtgaggcacaagaatcgcttgagcctgggaggcagaggttgcagtgagccaggatcgtgccactgcactccagcctgggcaacagagtgaaactccatctcataaataaat-ccataaaatgaaaatacaaaaattagccaggtatggtgttgccacctgtcattccaactactcgagaggctgaggcaggagaattgcttgaaccca--ggaggcagaggttgtagtcagccaacatatcaccactgcactgcagcttgggtggaagagtgagactcggtctc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009326 1851 - 122678785 I e calJac3.chr22 45892977 29 + 49145316 I a score=331906.000000 s hg38.chr19_GL949747v2_alt 573597 172 + 729520 aaacaaaacaaaacaaaaaaacaaGCAGCATATTTGCTGGGGCTCCAGTAGTGAGGAAATGCAGAGGGG-AGTGAGCGGAAGAAATCCTTGTCCTC--AGAGT---TTTTAGT-------GACAGCAGACATCTCGATATGTTCTATTGAAGACAATGGATGATGGTATTAAAATAAACAGGGTA s panTro4.chr19 59848460 172 + 63644993 aaacaaaacaaaacaaaaaaacaaGCAGCATATTTGCTGGGGCTCCAGTAGTGAGGAAATGCAGAGGGG-AGTGAGCAGAAGAAATCCTTGTCCTC--AGAGT---TTTTAGT-------GACAGCAGACATCTCGATATGTTCTATTGAAGACAATGGATGATGGTATTAAAATAAACAGGGTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56759195 175 + 60714840 aaacaaaacaaaacaaaaAAACAAGCAGCAtatttgctggggctccagtagtgaggaaatgcagaggggaagtgagcggaagaaatccttgtcctcatagagc---ttttagt-------GACAGCAGACATCTCGATGTGTTCTATTGAAGACAATGGATGATGGCATTAAAATAAACAGGGTA i ponAbe2.chr19 I 6 C 0 s nomLeu3.chr10 103294638 172 - 106955855 aacaaaaaaaaaaaaaaaaaacaaGCAGCATATTTACTGGGGCTTCAGTAGTGAGGAAATGCAGAGGGG-AGTGAGCAGAGCAAATCCTTGTCCTT--AGAGT---TTTTAGT-------GACAGCAGACACCTCGATATGTTCTATTGAAGACAATGGATGATGGTATTAAAATAAACAGGGTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60585784 176 + 64156825 aaaaaaaaaaaaaaaaaaaaaaaaGGAACATTTGTGCTGGGAATCCAGTACTGAGGAAATGCAGAGAGG-AGTGAGATGAAGAAATCCT------C--AGAGTTTATTTTAGTGACAGCAGACAGCAGACATCCGGATGTGTTCTATTGCAGACAATGGATGATGGTATTAAAATAAACAGGGTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55724795 171 + 59248254 aaaaaaaaaaaaaaaaaaaaaaaaGCAACATATGTGCTGGGGATCCAGTACTGAGGAAATGCAGAGAAG-AGTGAGATGAAGAAATCCG----CAC--AGAGTTTATTTTAGT-------GACAGCAGACATCCGGATGTGTTCTATTGAAGACAATGGATGATGGTATTAAAATAAACAGGATA i macFas5.chr19 I 13180 C 0 s papAnu2.chr19 47827187 158 + 51301725 aaaaaaaaaaaaaaaaaaaaaaaagcaacatatgTGCTGGGGATCCAGTACTGAGGAAATGCAGAGAGG-AGTgagatgaagaaa-------------------tattttagt-------gACAGCAGACATCTGGATGTGTTCTATTGAAGACAATGGATGACGGTATTAAAATAAACAGGATA i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47540381 162 + 50890351 ---------aaaaaaaaaaaaaaaagaaCATTTGTGCTGGGGATCCAGTACTGAGGAAATGCAGAGAGG-AGTGAGATGAAGAAATCCT----CAC--AGAGTTTATTTTAGT-------GACAGCAGACATCCGGATGTGTTCTATTGAAGACAATGGATGATGGTATTAAAATAAACAGGGTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009326 1851 - 122678785 I e calJac3.chr22 45892977 29 + 49145316 I a score=691362.000000 s hg38.chr19_GL949747v2_alt 573769 289 + 729520 GAGGTAAGTCAAACAGAGAGGCATTGATTGGCTAGACTTATGCTGGTCATTTAAGTCCTCTT-------------------TTGGAAAGTGATATGAGGAAAGAAACTGAAGGATGGTAGATCATGAACCAGCATGCTAACTGGGGGAGGGAATCTTGTAAATAAAATACtgagctagtgagaaagtagaatgatttatggctcataacttacacgaggatccccca-----taaggccctgtaggccactgtagaagcctttgg-----ttttgttttttttt---aaggcagagtttcactcttgttgccaaggctgga s panTro4.chr19 59848632 292 + 63644993 GAGGTAAGTCAAACAGAGAGGCATTGATTAGCTAGACTTATGCTGGTCATTTAAGTCCTCTT-------------------TTGGAAAGTGATATGAGGCAAGAAACTGAAGGATGGTAGATCATGAACCAGCATGCTAACTGGGGGAGGGAATCTTGTAAATAAGATACtgagctagtgagaaagtagaatgatttatggctcataacttacacgaggatccccca-----taaggccctgtaggccactgtaaaagccttTGA-----ttttgttttttttttttaaggcagagtttcactcttgttgccaaggctgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56759370 281 + 60714840 GAGGTAAGTCAAACACAGAGGCATTG----GCTAGACTTATGCTGGTCATTTAAGTCCTCTT-------------------TTGGAAAGTGATATGAGGAAAGAAACTGAAGGATGGTAGATCATGAACCAGCATGCTAATTGGGGGAAGGAATCTTGTAAATAAAATACtgagctagtgagaaagtagaatgattt-tggctcataacttataagaggat--ccca-----taaggccctgtaggccactgtaaaagcctttgg-----Attt-ttttttttt---aaggcagagtttcactcttgttgccaaggctgga i ponAbe2.chr19 C 0 M 381 s nomLeu3.chr10 103294810 282 - 106955855 GAGGTAAGTCAACCAGAGAGGCATTG----GCTAGACTTATGCTGGTCATTTAAGTCCTCTT-------------------TTGGAAAGTGATATGAGGAAACAAACTGAAGGATGGTAGATCATGAACCAGCATGCAAATAGGGGAAAGGAATCTTGTCAATAAAATACTGAGCTAGTGAAAAAGTAGAATGATTT-TGGCTCATAACTTATAAGAGGAT--CCCA-----TAAGGATCTGTAGACCACTGTAAAAGCCTTCGA-----tttttttttttttt---aagacagaggttagctcttgttgccaaggctgga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60585960 276 + 64156825 GAGGTAAGTCAACCAGAGAGGCACTG----GCTAGATTTATGCCAGTCATTTAAGTTCTCTC-------------------TGGGAAAGTGATATGAGGGAAAAAACTGAAGGATGTTAGATCATGAACCAGCTTGCTAATTGAGAGAAGGAATCTTGTCAATAAAATACtgagctagtaagaaagtagaatgattt-tggctcataactgataagacgag--acca-----taaggccctgtaggccactgtaaaagccttagA---------tttttttttt---aagac--agtttcgctcttgttgcccaggctgga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55724966 295 + 59248254 GAGGTAAGTCAACCAGAGAGGCACTG----GCTAGATTTATGCCGGTCATTTAAGTTCTCTCTGGGAAATCTTGTTCTCTTTGGGAAAGTGATAGGAGGAAAAAAACTGAAGGATGTTAGATCGTGAACCAGCTTGCTAATTGAGGGAAGGAATCTTGTCAATAAAATACtgagctagtaagaaagtagaatgattt-tggctcataactgataagacaag--acca-----taaggccctgtaggccactgtaaaagccttagA---------tttttttttt---aagac--agtttcgctcttgttgcccaggctgga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47827345 277 + 51301725 GAGGTAAGTCAACCAGAGAGGCACTG----GCTAGATTTATGCCAGTCATTTAAGTTCTCTC-------------------TGGGAAAGTGATATGAGGGAAAAAACTGAAGGATGTTAGATCGTGAACCAGCTTGCTAATTGGGGGAAGGAATCttgtaaataaaatactgagCTAGTGAGAAAGTAGAATGATTT-TGGCTCATAACTGGTAAGACGAG--ACCA-----TAAGGCCCTGTAGGCCACTGTAAAagccttaga--------ttttttttttt---aagac--agtttcgctcttattgcccaggctgga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47540543 278 + 50890351 GAGGTAAGTCAACCAGAGAGGCACTG----GCTAGATTTATGCCGCTGATTTaagttctctc-------------------tgggaaagtgatatgagggaaaaaactgaaggatgttagatcgtgaaccagcttgctaattgggggaagGAATCTTGTAAATAAAATACTGAGCTAGTGAGAAAGTAGAATGATTT-TGGCTCATAACTGATAAGACAAG--ACCA------------CTGTAGGCCACTGTAAAAGCCTTTGAttttttttttttttttttt---aagac--agtttcgctcttgttgcccaggctgga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45893006 243 + 49145316 GAGGTAAGTCAACCAGGGCAGCATTG----GCTAGATTTATGCTGGTCATTCAAGTCCTCTT-------------------TGGGAAAGTGATATGAGGAAAAAAACTGAAGAATGGTAGATCATGAACCA----GCTAATCTGGGGAAGGAATTTTGCTAATCAAATACtgagctagtgagaaagtagaataagtt-tggctcataacttacaagaagat--ctcataatgtaaggccctataggccactgtaaaagcctttaa---------attttTTT--------------------------------------- i calJac3.chr22 I 29 C 0 e canFam3.chr1 20009326 1851 - 122678785 I a score=106621.000000 s hg38.chr19_GL949747v2_alt 574058 61 + 729520 gtgcaatggcgtgatctcggctcactgcaacctccgcctcctgggttcaagcgattctcct s panTro4.chr19 59848924 61 + 63644993 gtgcaatggcgtgatctcggctcactgcaacctccgcctcctgggttcaagcgattctcct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103295092 61 - 106955855 gtgcaatggcaccatctcggctcactgcaacctctgcctcccaggttcaagtgattctcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60586236 61 + 64156825 gtgcaatgacgtgatctcagctcactgcaacttctgcctcccaggttcaaatgattctcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55725261 61 + 59248254 gtgcaatgacgtgatctcagctcactgcaacttctgcctcccaggttcaaatgattctcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47827622 61 + 51301725 gtgcaatgacatgatctcggctcactgcaacttccgcctcccaggttcaagtgattctcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47540821 61 + 50890351 gtgcaatgacgtgatctcggctcactgcaacttccgcctcccaggttcaagtgattctcct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45893249 24 + 49145316 --------------------------------tccacctctt--gttcaagcaattct--- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009326 1851 - 122678785 I e ponAbe2.chr19 56759651 381 + 60714840 M a score=896872.000000 s hg38.chr19_GL949747v2_alt 574119 342 + 729520 gccccagcctcccgagaatctaggattacagTCATAGCTGA---GATTACAGGAACAAG-----------------------------------------------------------------------ACACCAGGTAATCCACCC----ATTTGCATTGAGCTTTTGAGTCTTTGGAAATA--AAGGTATCACGGTCTGGCTTGAGGCTTGAAATATTCCTCAGGGGGATGGGTTAAG-------AAACTTCAGGAggccaggaatggtggctcatgcc--------tgtaatcccagcactttgggaggttgaggcaggtggatcacttgaggtcaggagtttgagaccagtctggctaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggtatggtggtgcacgcctgtaatcccaac s panTro4.chr19 59848985 342 + 63644993 gcctcagcctcccgagaatctaggattacagTCATAGCTGA---GATTACAGGAACAAG-----------------------------------------------------------------------ACACCAGGTAATCCACCC----ATTTGCATTGAGCTTTTGAGTCTTTGGAAATA--AAGGTGTCACGGTCTGGCTTGAGGCTTGAAATGTTCCTCAGGGGGATGGGTTAAG-------AAACTTCAGGAggccaggaatggtggctcatgcc--------tgtaatcccagcactttgggaggttgaggcaggtggatcacttgaggtcaggagtttgagaccagtctggctaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggtatggtggtgcacgcctgtaatcccaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56760032 346 + 60714840 GCCCCAGCCTCCCGAGAATCTAGGATTACAGGCATAGCTGA---GATTACAGGCACAAG-----------------------------------------------------------------------ACACCAGGTAATCCACCCCTTTATTTGCACTGAGCTTTTGAGTCTTTGGAAATA--AAGGTGTCACGGTCTGGCTTGAGGCTTGAAATGTTCCTCAGGGTGATGGGTTAAG-------AAACTTCAGGAggccaggaatggtggctcatgcc--------cataatcccagcactttgggaggctgaggcaggtggatcacttgaggtcaggagtttgagaccagtctggccaacatggtgaaaccccgtctttactaaaaatgcaaaaattagctgggtatggtggtgcacacctgtaatcccagc i ponAbe2.chr19 M 381 C 0 s nomLeu3.chr10 103295153 357 - 106955855 gccccagcctcctgagaatctaggattacaggcATAGCTGGGATGATTACAGGCACAAG-----------------------------------------------------------------------ACACCAGGTAATCCACCCCTTTATTTGCACTGAGCTTTTGAGTGTTTGGAAATA--AAGGTGTCACAGTCTGGCTTGAAGCTTGAAATGTTCGTCAGGGTGATGGGTTAAG-------AAACTTCAGGAggccaggaacggtggctcatgcctacacgattacaatcccagcattttgggaggctgaggcaggtggatcgcttgaggtcaggagtttgagaccagtctggccaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggtatggtggtgcatgcctgtaatgccaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60586297 329 + 64156825 gccccagcctccggagaatctag---------------------gattacaggcacaag-----------------------------------------------------------------------cca-cAGGTGATCCACTCCTTTATTTGCACTGAGCTTTTGAGTCTTTGGAAATAGTAAGGTGTCACGGTCTGGCTTGCAGCTTGAAATGTTCCTCAGGGTGATGGGTTAAG-------AAATTTCAGGAggacaggaacagtggctcatgcc--------tgtaatctcagtactttgggaagctgaggcaggtggatcacttgaggtcaggagttggagaccagcccggccaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggcatgatggtgcacccctgtaatcctagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55725322 330 + 59248254 gccccagcctccgcagaatctag---------------------gattacaggcacaag-----------------------------------------------------------------------ccaccaGGTGATCCACTCCTTTATTTGCACTGAGCTTTTGAGTCTTTGGAAATAGTAAGGTGTCATGGTCTGGCTTGCAGCTTGAAATGTTCCTCAGGGTGATGGGTTAAG-------AAACTTCAGGAGGACAGGAAcagtggctcatgcc--------tgtaatcccagtactttgagaggctgaggcagggggatcacttgaggtcaggagttggagaccagcccagccaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggcatggtggtgcacccctgtaatcctagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47827683 330 + 51301725 gccccagcctccggagaatctag---------------------gattacaggcacaag-----------------------------------------------------------------------ccaccaggTGATCCACTCCTTTATTTGCACTGAGCTTTTGAGTCTTTGGAAATAGTAAGGTGTCACGGTCTGGCTTGCAGCTTGAAATGTTCCTCAGGGTGATGGGTTAAG-------AAACTTCAGGAGgacaggaacagtggctcatgcc--------tgtaatcccagtactttgggaagctgaggcaggtggatcacttgaggtcaggagttgcagaccagccccgccaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggcatggtggtgcacccctgtaatcctagc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47540882 330 + 50890351 gccccagcctccggaaaatctag---------------------gattacaggcacaag-----------------------------------------------------------------------ccaccaGGTGATCCACTCCTTTATTTGCACTGAGCTTTTGAGTCTTTGGAAATAGTAAGGTGTCACGGTCTGGCTTGCAGCTTGAAATGTTCCTCAGGGCGATGAGTTAAG-------AAACTTCAGGAggacaggaacagtggctcttgcc--------tgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggtcaggagttggagaccagcccagccaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggcatggtggtgcacccctgtaatcctagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45893273 406 + 49145316 gccccagcctcctgagtagctga---------------------gattacagacgcgagctaccacacacagctaatttttgtgttttcagtagagacggggtttcgccatgttggtctggaacccctgaccctcaggtgatccatccCTTTATGTGCACTAAGCTTTTGAGCCTTTGGAACAA--AAGGTGTCATGGTCTGACTTGCCGTTTAGAACGTTCCTCAGGGTGATGGGAGAAGTTTCTTAAAACTTCAGGAggtcaggaatggcggcttatgcc--------tgcaatgccagcactttgggaaggcgaggcttgtggatcacttgaggtcaggaatttgagaccagcctggccaacatggtgaaaccaggtctgtattaaaaatacaaaaagtggccgggcacaatggctcaagcctgtaatcccagc i calJac3.chr22 C 0 I 278 e canFam3.chr1 20009326 1851 - 122678785 I a score=270628.000000 s hg38.chr19_GL949747v2_alt 574461 113 + 729520 tactcagctcaatcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatcgcaccactgcactccagcctgggtgacaaagcgagactctgtctgaaaaa s panTro4.chr19 59849327 113 + 63644993 tactcagctcaatcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatcgcaccactgcactccagcctgggtgacagagcgagactctgtctgaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56760378 113 + 60714840 tactcagctgaatcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatcacaccactgcactccagcctgggtgacagagtgagactctgtctgaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103295510 117 - 106955855 tgcttggctgaatcaggagaatcgcttgaaccttggaggctgaggttgcagtgagccaagcaagatggcatcactgcactccagcctgggtaacagagcgagactctgtctgaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60586626 113 + 64156825 tacttagctgaggcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatggcaccactgcactccagtctgggtgacagagcgagacttcgtctcaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55725652 113 + 59248254 tacttagctgaggcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatggcaccactgcactccagtctgggtgacagagcgagactccgtctcaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47828013 113 + 51301725 tacttagctgaggcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatggcaccactgcactccagtctgggtgacagagcgagactccgtctcaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47541212 113 + 50890351 tacttagctgaggcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatggcaccactgcactccagtctgggtgacagagtgagactccgtctcaaaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009326 1851 - 122678785 I e calJac3.chr22 45893679 278 + 49145316 I a score=893697.000000 s hg38.chr19_GL949747v2_alt 574574 368 + 729520 agaaaaaaaGTACCCTGTGTTCTAGTGTTTTTTTTCTTTAC-----AGCAAAGCTAAGTAGTAATG-AC---GTGCAGATTCTCTTTGCATTAGGATTGCAGATTCTAGTTGGAAAATAGGTTGCATCCAAGAGATGCAACTGAC--AAACTTGGGGGAGAGAAGTGATGAA-----GAGCTCGCCATTCCATTTGTGGAGACTTTGCATTTTCT--GGGGGTGGTATCCCACCTATGGTTCCCTGGGTTTATGAGGTGGGGCAGGCTCACTGCTTCCTGATTACTGGATCCCAGCAGAAGCAGC-ATGCTGCTGAAGTCCAGGTCACTGGGGGCCATTGTTATCTATATTTCACTTCTCCAGG---CCCTCTACCTGACTTTAGAAGTG s panTro4.chr19 59849440 373 + 63644993 agaaaaaaaGTACCCTGTGTTCTAGTGTTTTTTTTCTTTACTCTACAGCAAAGCTAAGTAGTAATG-AC---GTGCAGATTCTCTTTGCATTAGGATTGCAGATTCTAGTTGGAAAATAGGTTGCATCCAAGAGATGCAACTGAC--AAACTTGGGGGAGAGAAGTGATGAA-----GAGCTCGCCATTCCATTTGTGGAGACTTTCCATTTTCT--GGGGGTGGTATCCCACCTATGGTTCCCTGGGTTTATGAGGTGGGGCAGGCTCACTGCTTCCTGATTACTGGATCCCAGCAGAAGCAGC-ATGCTGCTGAAGTCCAGGTCACTGGGGGCCATTGTTATCTATATTTCACTTCTCCAGG---CCCTCTACCTGACTTTAGAAGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56760491 378 + 60714840 agaaaaaaaGTACCCTGTGTTCTAGTGTTTTTTTTCTTGTCTCTACAGCAAAGCTAAGTAGTAATG-ACATTATGCAGATTCTCTTCGCATTAGGATCGCAGATTCTAGTTGGAAAATAGGTTGCATCCAAGAGATGCAACTGAC--AAACTTGGGGGAGAGAAGTGATAAA-----GAGCTCACCATTCCATTTGTGGAGACTTTGCATTTCCTGGGGGGGGGGTATCCCACCTATGGTTCCCTGGGTTTATGAGGTGGGGCAGGCTCACTGCTTCCCGATTACTGGATCCCAGCAGAAGCAGC-ATGTTGCTGAAGTCCAGGTCACTGGGGGCCATTCTCATCTATATTTCACTTCTCCAGG---CCCTCTACCTGACTTTGGAAGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103295627 376 - 106955855 acaaaaaaaGTACCCTGTGTTCTAGTGGTTTTTTTCTTGTCTCTACAGCAAAGCTAAGTAGTAATG-ATATTATGCAGATTCTCTTCACATTAGGATTGCAGATTCTAGTTGGAAAATAGGTTGCATCCAAGAGATGCAATTGAC--AAAGTTGGGGGAGAGAAGTGATGAA-----GAGCTCGCCATTCCATTTGTGGAGACTTTGCATTTCCT--GGGGGTGGTATCCCACCTGTGGTTCCCTGGGTTTATGAGCTGGGGCAGGCTCACTGCTTCCTGATTCCTGGATCCCAGCAGAAGCAGC-ATGTTGCTGAAGCCCAGGTCCCTGGGGGCCATTCTCATCTATATTTCACTTCTCCAGG---CCCTCTACCTTACTTTGGAAGTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60586739 372 + 64156825 ag-aaaaaaGTACCCTGTGTTCTGGTG-TTTTTTTCTTGTCTTTACAGCAAAGCTAAGTAATAATG-ACATGATGCAGATTCTCTTCTCATTAGGATTGCAGATTCTAGTTGGAAAATAGGGTGCATCCAAG-GATGCAACCGAC--AAGCTTCGGAGAGAGAAGTGATAAA-----CAGCTCACTGTTCCATTTGTGGAGGCTTTGCATTTCCT---GGGGTGGTATCCCATCTCCAGTTCCCT-GGTTTATGAGCTGGGGCAGGCTCACGGCTTCCTGATTACTGGATCCCAGCAGAAGCAGCCATGTTCCTGAAGTCCAGGTCACTGGGGGCCATTCTCACCTATATTTCACTTCTCCAGG---CTCTCTACATGACTTTGGAAGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55725765 374 + 59248254 ag-aaaaaaGTACCCTGTGTTCTGGTG-TTTTTTTCTTGTCTTTACAGCAAAGCTAAGTAGTAATG-TCATGATGCAGATTCTCTTCTCATTAGGATTGCAGATTCTAGTTGGAAAATAGGGTGCATCCAAG-GATGCAACTGAC--AAGCTTCGGAGAGAGAAGTGATAAA-----CAGCTCACTGTTCCATTTGTGGAGGCTTTGCATTTCCT---GGGGTGGTATCCCATCTCCAGTTCCCTGGGTTTATGAGCTGGGGCAGGCTCAcggcttcctgattactggatcccagcagaagcagccatgttcctgaagtccaggtcactgggggccATTCTCACC--TATTTCACTTCTCCAGGCCCCCCTCCACATGACTTTGGAAGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47828126 365 + 51301725 agaaaaaaagtacccTGTGTTCTcgtgttttttttcttgtctctacAGCGAAGCTAAGTAGTAATG-ACACGATGCAGATTATCTTCTCATTAGGATTGCAGATTCTAGTTGGAAAATAGGTTGCATCCAAG-GATGCAACTGAC--AAGCTTCGGAGAGAGA---------------AGCTCACTGTTCCATTTGTGGAGGCTTTGCATTTCCT---GGGGTGGTATCCCATCTCCAGTTCCCTGGGTTTATGAGCGGGGGCAGGCTCACGGCTTCCTGATTACTGGATCCCAGCAGAAGCAGCAATGTTCCTGAAGTCCAGGTCACTGGGGGCCATTCTCACCTATATTTCACCTCTCCAGG---CCCTCTACATGACTTTGGAAGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47541325 374 + 50890351 agaaaacaaGTACCCTGTGTTCTCGTG-TTTTTTTCTTATCTCTACAGCAAAGCTAAGTAGTAATG-TCATGATGCAGATTCTCTTCTCATTAGGATTGCAGATTGTAGTTGGAAAATAGGTTGCATCCAAG-GATGCAACTTAC--AAACTTCGGAGAGAGAAGTCATAAA-----CAGCTCATTATTCCATTTGTGGAGGCTTTGCATTTCCT---GGGGTGGTATCCTATCTCCAGTTCCCTGGGTTTATGAGCTGGGGCAGGCTCACAGCTTCCTGATTACTGGATCCCAGGAGAAGCAGCAATGTTCCTGAAGTCCAGGTCACTGGGGGCCATTCTCACCTATATTTCACTTCTCCAGG---CCCTCTACATGACTTTGGAAGTG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20011177 370 - 122678785 AAAACAGAAACACCATACAttttgatgttctttctcatttct-----acaaggctaggaaagcatgtacatgacccagattcagtttgcattag-------ggttttagttgtaaagcatgttgcatcaataagatgcatttaatggaggcttgtgaaggagaagtgatgtacagcccaGCCCACCATCCCATTGATGGAGCCACTGCATTTCAA--AGGGGCAATATTC-GTCCACAGTCCCCTGGGCAC-CAAGCTGGGGAAGTCTCTGTGTGCCCTGCTCACTAGATCCCAGTAGAAGCAGT-GTTCTCCTGAAGCCTACTCTGCTAGAGGCCATCCCCATCTGTATCCCACTCCTCCAGG---CCCTCAGAATAACCCtgaaagtg i canFam3.chr1 I 1851 I 236 e calJac3.chr22 45893679 278 + 49145316 I a score=801729.000000 s hg38.chr19_GL949747v2_alt 574942 389 + 729520 CCCACCCACATATATTCAGTTTCTGGAGGGGTTTGATCTTAAAACTGGATCCGAAGTGATACAGTCTGAGATATTGAAAACATAGAAATTggccgggcatggtggctcacgcctgtaatcccagcactttggaaggccaaggcgggcagatca--tgaggtcaggagatcgagaccatcctggctaacactgtgaaaccccatctctactaaaaatacaaaaaaaattagccgggcacggtggcgggcgtctgtagtcccagctactcaggaggctgaggcaggagaatagcaagaacccgggaggaagaggttgcagtgagccgagatcgcgccactgcactccagcctgtgcaaatagaacgaggctccgtctc----aaaaa---aaaaaaaaaa s panTro4.chr19 59849813 388 + 63644993 CCCACCCACATATATTCAGTTTCTGGAGGGGTTTGCTCTTAAAACTGGATCCGAAGTGATACAGTCTGAGATATTGAAAACATAGAAATTggccaggcgtggtggctcacgcctgtaatcccagcactttggaaggccaaggcgggcagatca--tgaggtcaggagattgagaccatcctggctaacactgtgaaaccccatctctactaaaaatacaaaaaaaattagccaggcacggtggcgggcgtctgtagtcccagctactcaggaggctgaggcaggagaatagcgagaacccgggaggaagaggttgcagtgagccgagatcacgccactgcactccagcctgggcaactagaacgaggctccgtctc----aaaac---aaaaaaaaa- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56760869 384 + 60714840 CCCACCCACCTGTATTCAGTTTCTGGAGGGGTTTACTCTTAAAACTGCATCCAAAGTGAT--AGTCTGAGATACTGAAAACATAGAAATTggccgggcgtggtggcccacgcctgtaatcccagcactttgggaggccgaggcaggcagatca--tgaggtcaggagatcgagaccatcctggctaacactgtgaaaccccatctcttctaaaaatacaaaaaaaattagccgggcatggtggcgggcgtctgtagtcccagctactcgggaggctgaggcaggagaatagcgagaacccgggaggaagaggttgcagtgagccgagatcgcgccactgcactccagcctgggcaactagagcgaggctccatctc----aaaaa---aaataaa--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103296003 349 - 106955855 CCCACCCACCTATATTCAGTTTCTGGAGGGGTTTGCTCTTGAAACTGCATTCA--------------------------------------gctgggcgtggtggctcatgcctataatcccagcactttgggaggctgaagcaggcggatcacctgaagtcaggagttcgagaccagcctgaccaacatggggaaaccccgtctctactaaaaatac----agaattagccgggcatggtggcacatgcctgtaatcccagctactagggaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcggtgagccgagatcgtgccattgcactccagcctgggcaacaaaagtgaaactccttctc----aaaaa---aaaaaaaaaa i nomLeu3.chr10 C 0 I 304 s rheMac3.chr19 60587111 390 + 64156825 ACCACCCACCTATATTCAGTTTCTGGAGGGGTTTGCTCTTAAAACTGGATCCAAAGTGATACAGTCTGAGATACTGAAAACATAGAAATTgaccgggcgtggtggctcacgcctgtaatcccagcactttgggaggccaagacaggcggatca--tgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatac--aaaaaattagctgggcgtggtggcgggcatctgtagtcccagctacccaggaggctgaggcaggagaatctcttgaacctgggaggtggaggttgcagtgagccaagatcatgccattgcactccagcctgggcgac-agagcgagactccatgtcaaataaataaataaataaa--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55726139 386 + 59248254 CCCACCCACCTATATTCAGTTTCTGGAGGGGTTTGCTCTTAAAACTGGATCCAAAGTGATACAGTCTGAGATACTGAAAACATAGAAATTgaccgggcgtggtggctcacgcctgtaatctcagcactttgggaggccaagacaggcggatca--tgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatac--aaaaaattagctgggcgtggtggcgggcatctgtagtcccagctacccaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagccaagatcatgccattgcactccagcctgggcgac-agagcgagactccatgtc----aaaaaaataaataaa--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47828491 378 + 51301725 CCCACCCACCTATATTCAGTTTCTGGAGGGGTTTGCTCTTAAAACTGGATCCAAAGTGATACAGTCTGAGATATtgaaaacatagaaattgaccgggtgcagtggcttacacctgtaattccagcactttgggaggccgagacaggcggatca--tgaggtcaggagatcaacaccatcctggctaacacagtgaaaccccatctctactaaaaatac--aaaaaattagctgggcgtggtggcgggcatctgtagtccaagctacccaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagccaagatcatgccattgcactccagcctgggcgac-agagcgagactccatatc------------aaataaa--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47541699 380 + 50890351 CCCACCCACCTATATTCAGTTTCTGGAGGGGTTTGCTCTTAAAACTGGATCCAAAGTGATGCAGTCTGAGATAGTGAAAACATAGAAATTgaccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatca--tgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatac--aaaaaattaactgggtgtggtggcgggcatctatagtcccagctacccaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagccaagatcacgccattgcactccagcctgggcaactagagcgagactctgtgtc----a-------aaaaaaa--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20011547 236 - 122678785 I e calJac3.chr22 45893679 278 + 49145316 I a score=292817.000000 s hg38.chr19_GL949747v2_alt 575331 131 + 729520 aagaaaacatagaaaTTAAGGATTTCCAGATTTCCAAACACTTTAAAAATGAggccaggcatgatggctcatgcctgtaatcctagcacattgggaggccgaggtgggaggattccttgagcaccagaatt s panTro4.chr19 59850201 129 + 63644993 --gaaaacatagaaaTTAAGGATTTCCAGATTTCCAAACACTTTAAAAATGAggccaggcatgatggctcacgcctgtaatcctagcacactgggaggctgaggtgggaggattccttgagcaccagaatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761253 129 + 60714840 --gaaaacatagaaaTTAAGGATTTCCAGATTTCCAAACACTTTAAAAACGAggccaggcatgatggctcatgcctgtaatcctagcacattgggaggccgaggtgggaggattccttgagcaccagaatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103296656 131 - 106955855 aagaaaacatagaaaTTAAGGATTTCCAGATTTCCAAACACTTTAAAAATGAggccaggcatgatggctcatgcctgtaatcctagcacgttgggaggccgaggtgggaggattctttgagcaccagagtt i nomLeu3.chr10 I 304 C 0 s rheMac3.chr19 60587501 131 + 64156825 taaataaaACAGAAATTAAGGATTTCCAGATTTTGAAAAACTTTAAAAACGAggccgggcgtgatggctcatgcctgtaatcctagcacgttgggaggccgaagtgggaggattccttgagtctccgagtt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55726525 131 + 59248254 taaataaaacagaaaTTAAGGATTTCCAGATTTTGAAAAACTTTAAAAACGAggccgggcgtgatggctcatgcctgtaatcctagcacgttgggaggccgaagtgggaggattccttgagtctccgagtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47828869 130 + 51301725 taaataaaacagaaattaaggATTTCCAGattttgaaaaactttaaaaacgaggccaggcgtgatggctcatgcctgtaatcctagcacgttgggaggccgaagtgggaggatt-cttGAGTCTccgagtt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47542079 131 + 50890351 aaaagaaaacaaaaaTTAAGGATTTCCAGATTTCAAAAAACTTTAAAAACGAggccaggcatgatggctcatgcctgtaatcctagcacattgggaggccgaagtgggaggattccttgagtctccgagtt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20011547 236 - 122678785 I e calJac3.chr22 45893679 278 + 49145316 I a score=577017.000000 s hg38.chr19_GL949747v2_alt 575462 214 + 729520 caaaaccagcctgggaaagatgac--aagacctcatctctacagaaaacagttacctggccatggtaatacatgcctgtagagccagctactcaggaggctgaggtgggaggactgatcaagcctggaagaccgaagccacagtgagccgtaatca--------ccccactgcactccaggctgggggacagagcaagaccctgtctc--------------aaaaaaagaaagaaag s panTro4.chr19 59850330 214 + 63644993 caaaaccagcccgggaaagatgac--aagacctcatctctacagaaaacagttacctggccatggtaatacatgcctgtagagccagctactctggaggctgagttgggaggcccgatcaagcctggaagaccgaagccgcagtgagccgtaatca--------ccccactgcactccaccctgggggacagagcaagaccctgtctc--------------aaaaaaagaaagaaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761382 214 + 60714840 caaaaccagcccgggaaagatgac--aagacctcatctctacagaaaacagttagctggccatggtaatacatgcctgtagacccagctactcaggaggctgaggtgggaggaccaatcaagcctggaagagtgaagccgcagtgagctgtgatca--------ccccactgcgctccagcctgggggacagagcaagaccctgtctc--------------aaagaaagaaaggaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103296787 214 - 106955855 caaaaccagcccgggaaagatgac--aagaccccatctctacagaaaacagttagctggccatggtaacacatgcctgtagacccagctgctcaggaggctgaggtgggagggccgaacaagcccggaagactgaagccacagtgagccgtgatca--------ccccactgcactccagcttgggggacagagcaagaccctgtctc--------------aaagaaagaaaggaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60587632 224 + 64156825 caaaaccagcctggaaaagatgac--aagacctcttctctacagaaaaaagttagctggccatggtaatacatgcctgtagtcccagctactcaggaggctgaggtgggaggaccaatcaagcatggaagactgaagccgcagtgagccgtgatca--------caccactgcactccagcctgggggacggagcaagaccctgtctc----aaaaaaaaaaaaaaaaagaaagaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55726656 222 + 59248254 caaaaccagcctggaaaagatgac--aagacctcatctctacagaaaaaagttagctggccatggtaatacatgcctgtagtcccagctactcaggaggctgaggtgggaggaccgatcaagtctggaagactgaagccgcagtgagccgtgatca--------caccactgcactccagcctgggggacggagcaagaccctgtctc------aaaaaaaaaaaaaaagaaagaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47828999 225 + 51301725 caaaaccagcctggaaaagatgac--aagacctcatctctacagaaaaaagttAGCTGGCCATGGtaatacatgcctgtagtcccagctactcaggaggctgaggtgggaggactgatcAAGCCTGGAAGACTGaagccgcagtgagctgtgatca--------caccactgcactccagcctgggggacggagcaagaccctgtctc---aaaaaaaaaaaaaaaaaggaaagaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47542210 207 + 50890351 caaaaccagcctggaaaaga-------------------------------ttagctggccatggtaatacatgcctgtagtcccagctactcaggaggctgaggtgggaggaccgatcaagcctggaagactgaagccacagtgagccgtgatcacaccactgcaccactgcactccagcctgggggacagagcaagatcctgtctcaaaaaaaaaaaaaaaaaaaaagaaagaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45893957 205 + 49145316 caaaaccaacctgggaaagatgatcagagacctcatctctacacaaaaatgttagctggccatggtaatccatacctatagtcccagctactcaggaagctgaggtgggaagacccattaagcctggaaggttgaagctgcagtgagtcgtgatca--------caccacagtgccccagcctggggaacagagcaagaccctatctc-------------------------gaaaa i calJac3.chr22 I 278 C 0 e canFam3.chr1 20011547 236 - 122678785 I a score=918808.000000 s hg38.chr19_GL949747v2_alt 575676 277 + 729520 aagaaaaagaaaaTCGCCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGATACTCAAGTCCAGGTTTGTGAGGCTGCAGGCTTCTTGGAGCGCCTCTGAGAGGTATCTACAGCCAAGCTTGGTTATGCTGCATTGCTGTAACCTACAGGATAATCAAAGGAAGAGAAGCCTGTTATCCCTCTGGCTAACGCCCTGTGAAGCA---GTTATTTCCAACACTATATACCTTCCAC s panTro4.chr19 59850544 277 + 63644993 aagaaaaagaaaaTCGCCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGACACTCAAGTCCAGGTTTGTGAGGCTGCAGGCTTCTTGGAGCGCCTCTGAGAGATATCTACAGCCAAGCTTGGTTATGCTGCATTGCTGTAACCTACAGGATAATCAAAGGAAGAGAAGCCTGTTATCCCTCTGGCTAACACCCTGTGAAGCA---GTTATTTCCAACACTATATACCTTCCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761596 277 + 60714840 aagaaaaagaaaaTCACCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGAGACTCAAGTCCAGGTTTGTGAGGCTGCAGGCTTCTTGGAGCGCCTCTGAGATATATCTACAGCCAAGCTTGGTTATGCTGCATTGCTGTAACCTGCAGGATAATCAAAGGAAGAGAAGCCTGTTATCCCTCTGGCTAACGCCCTGTGAAGCA---GTTATTTCCAACACTATATACCTTCCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103297001 273 - 106955855 ----aaaagaaaaTCGTCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGAGACTCAAGTCCAGGTGTGTGAGGCCGCAGGCTTCTTGGAGTGCCTCTGAGAGATATCTACAGCCAAGCTTGGTTATGCTGCATTGCTGTAACCTGCGGGATAATCAAAGGAAGAGAAGCCTGTTATCCCTCTGGCTAACGCCCTGTGAAGCA---GTTATTTCCAACACTATATACCTTCCAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60587856 276 + 64156825 aaGAAAAAGGAAATTGCCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGAGACTCAAGTCCAGGTTTGTGAGGCTGCAAGCTTCTTGGAGTGCCTCTGAGAGATATCTACAGCCACGCTTGGTTATGCTGCATTGCTGTAACCTGCAGGATAATCAAAGGAAGAGAAGCCTGTTA-CCGTCTGGCTAATGCCCTGTGACGTA---GTTATTTCCAGCACTGTATACCTTCCAC i rheMac3.chr19 C 0 I 703 s macFas5.chr19 55726878 276 + 59248254 aagaaaAAGGAAATTGCCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGAGACTCAAGTCCAGGTTTGTGAGGCTGCAAGCTTCTTGGAGTGCCTCTGAGAGATATCTACAGCCACGCTTGGTTATGCTGCATTGCTGTAACCTGCAGGATAATCAAAGGAAGAGAAGCCTGTTA-CCGTCTGGCTAATGCCCTGTGACGTA---GTTATTTCCAGCACTGTATACCTTCCAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47829224 277 + 51301725 aagaaaaaggaaatcgcCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGAGACTCAAGTCCAGGTTTGTGAGGCTGCAGGCTTCTTGCAGTGCCTCTGAGAGATATCTACAGCCACGCTTGGTTATGCTGCATTGCTGCAACCTGCAGGATAATCAAAGGAGGAGAAGCCTGTTATCCCTCTGGCTAATGCCCTGTGATGTA---GTTATTTCCAGCACTGTATACCTTCCAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47542417 274 + 50890351 aagaaaaagaaaaTCACCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGAGACTCAAGTCCAGGTTTGTGAGGCTGCACGCTTCTTGGAGTGCCTCTGAGAGATATCTACAGCCACGCTTGGTTATGCTGCATTGCTGTAACCTGCAGGATAATCAAAGGAAGAGAAGCCTGTTATCCGTCTGCCTAATGCCCTGTGAC------GTTATTTCCAGCACTGTATACCTTCCAC i chlSab2.chr6 C 0 I 3 s calJac3.chr22 45894162 280 + 49145316 agagaaaaaaaaGTCACCTACCGTAAGTGTTTTAGGTTACAGTCTGGATTCTCTAACGCCTTGCAGAGAATCCACAATCCACACCCTATGTGGTTGAGGCTCAAGTCCAAGTCTGTGAGGCTGCAGACTCCTTGGAGAACCTTCGAGATAGGTCTGCAGCCACGCTTGGTTATGTTGCATTGCTGTAACCTGCAGGATCATCACATGAAGAGAGGCCTGTTATCCCTCGGACTTATGCCCTGCGAAGTGGCTGTCACTCCCAGCACCATATATCTTCCGC i calJac3.chr22 C 0 I 3 s canFam3.chr1 20011783 263 - 122678785 AAAATGAGCAAAAGTACCTACCCTAGACATCTTAGGTTACAATTTGGCTTCTTCAAGGCCTTGCAGAGAAACCATGATCTGGTACCTATAGGATTGAGACCCAGATCCAAGTTTGTTATGCTGGAATCTTCTTTAAGAAGCTTTAAGATGTGTCTGTAGACACATCTGGTTATGTTGCAGTGTGATAATCTGCA-------------AAGACAATCCCGTTC-ATCTCTGGCTTACACCCTGTAAGATG---GTTACTTCCAACAGCACACACCTTCTAC i canFam3.chr1 I 236 C 0 a score=294.000000 s hg38.chr19_GL949747v2_alt 575953 1 + 729520 T s panTro4.chr19 59850821 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761873 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103297274 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727154 1 + 59248254 C i macFas5.chr19 C 0 C 0 s canFam3.chr1 20012046 1 - 122678785 T i canFam3.chr1 C 0 I 23589 e calJac3.chr22 45894442 3 + 49145316 I e chlSab2.chr6 47542691 3 + 50890351 I e papAnu2.chr19 47829501 0 + 51301725 C e rheMac3.chr19 60588132 703 + 64156825 I a score=910.000000 s hg38.chr19_GL949747v2_alt 575954 1 + 729520 T s panTro4.chr19 59850822 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761874 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103297275 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727155 1 + 59248254 T i macFas5.chr19 C 0 I 1 e canFam3.chr1 20012047 23589 - 122678785 I e calJac3.chr22 45894442 3 + 49145316 I e chlSab2.chr6 47542691 3 + 50890351 I e papAnu2.chr19 47829501 0 + 51301725 C e rheMac3.chr19 60588132 703 + 64156825 I a score=63774.000000 s hg38.chr19_GL949747v2_alt 575955 118 + 729520 ATATActggaatgcagtgctgcactcttggctcactgcaacctctgcctcccaggttcaagcgattcttctgcctcagcctcccaagtagctgggattataggtgcccgccaccTATA s panTro4.chr19 59850823 118 + 63644993 ATATActggaatgcagtgctgcactcttggctcactgcaacctctgcctcccaggttcaagcgattcttctgcctcagcctcccaagtagctgggattataggtgcccgccaccTATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761875 118 + 60714840 ATATActggaatgcagtgctgcaatcttggctcactgcaacctctgcctcccaggttcaagcgattcttctgcctcagcctcccaagtagctgagatgatagttgcctgccaccTATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103297276 118 - 106955855 ATATAccggaatgcagtgctgcaatcttggctcactgcaacctctgcctcccaggttcaagcgattcttctgcctcagcctcccaagtagctgggattataggtgactgccaccTATA i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e calJac3.chr22 45894442 3 + 49145316 I e chlSab2.chr6 47542691 3 + 50890351 I e papAnu2.chr19 47829501 0 + 51301725 C e macFas5.chr19 55727156 1 + 59248254 I e rheMac3.chr19 60588132 703 + 64156825 I a score=250836.000000 s hg38.chr19_GL949747v2_alt 576073 218 + 729520 taaccagacttggtggtgcacgcctgtagtgccagctcc-tcagaagactgaggcaggagaatcgcttgaatccgggaggcagaggctgcagtgagctgagatcgcgccactgcactccagcccgggcgacagagcgagactccgtctcaagaaaaaaacaa--------caaca-acaaaaaGTATTTATATAAAACATAGGTGGCAGGTAGGAATTGACCCATGAA s panTro4.chr19 59850941 218 + 63644993 taaccagacttggtggtgcgcgcctgtagtgccagctac-tcagaagactgaggcaggagaatcgcttgaatccgggaggcagaggctgcagtgagctgagatcgtgccatggcactccagcccgggcgacagagcgagactccgtctcaagaaaaaaacaa--------caaca-aaaaaaaGTATTTATATAAAACATAGGTGGCAGGTAGGAATTGACCCATGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761993 214 + 60714840 taaccaggcttggtggtgcacgcctgtaataccagctac-tcagaaggctgaggcaggagaatcgcttgaatctgggaggcagaggctgcagtgagctgagatcgcgccactgcactccagcctgggcgacagagcaagactccgtctcaagaaaa----aa--------caaca-acaaaaaGTATTTATAAAAAACACAGGTGGCAGGTAGGAATTGACCCATGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103297394 218 - 106955855 taaccaggcttggtggcgcgcacctgtagtaccagctac-tcagaaggctgaggcaggacaatcgcttgaatccaggaggcagaggctgcagtaagctgagatcacgccactgcactccagccggggcgacagagtgagactccgtctcaagaaaaaaacaa--------caaca-aaaaaaaGTATTTATAAAAAACATAGGTGGCAGGCAGCAATTGACCCATGAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3519994 225 - 59248254 taaccaggcttggtggtgcgtgcctgtagtaccagctac-tcagaaggctgaggtaggagaatcgcttgaatcc-ggaggcagaggctgcagtgagctgagatcgcaccaccgcactccaacctgggcaacagagcgagactccgtctcaagaaaaaaataaaaaaaaCTCAACCAAAAAACCTTATTTATA-AAAACATAGGTGGCAGGTTGGAATTGACCCATGAA i macFas5.chr19 n 1 C 0 s papAnu2.chr19 3470877 224 - 51301725 taaccaggcttggttgTGCgtgtctgtagtaccagctacttcagaaggctgaggtaggagaatcgcttgaatcc-ggaggcagaggctgcagtgagctgagatcgcaccaccgcactccagcctgggcaacagagcgagactccgtctcaagaaaaaaataaaaaaaactcaaCC-AAAAACCTTATTTAT--AAAACCTAGGTAGCAGGTTGGAATTGACCCATGAA i papAnu2.chr19 n 0 T 54731 e canFam3.chr1 20012047 23589 - 122678785 I e calJac3.chr22 45894442 3 + 49145316 I e chlSab2.chr6 47542691 3 + 50890351 I e rheMac3.chr19 60588132 703 + 64156825 I a score=-1182.000000 s hg38.chr19_GL949747v2_alt 576291 3 + 729520 -CTG s panTro4.chr19 59851159 3 + 63644993 -CTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56762207 3 + 60714840 -CTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103297612 3 - 106955855 -CTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3520219 2 - 59248254 -TT- i macFas5.chr19 C 0 T 51553 s papAnu2.chr19 47829501 3 + 51301725 CTT- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e calJac3.chr22 45894442 3 + 49145316 I e chlSab2.chr6 47542691 3 + 50890351 I e rheMac3.chr19 60588132 703 + 64156825 I a score=372757.000000 s hg38.chr19_GL949747v2_alt 576294 180 + 729520 GAGCTATATACTTCCAGGTGGGCTTGCACAT-AAAAGCATGCAAATGggccgggcacagtggctcacgcctataatcacagca--gtgggaggccaagacgggcagatcatttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctact------aaaaaatacaaaaatC s panTro4.chr19 59851162 180 + 63644993 GAGCTATATACTTCCAGGTGGGCTTGTACAT-AAAAGCATGCAAATGgaccgggcacagtggctcatgcctataatcacagca--gtgggaggccaagacgggcagatcatttgaggtcaggagttcaagaccagtctggccaacatggtgaaaccccatctctact------aaaaaatacaaaaatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56762210 179 + 60714840 GAGCTATACATTTCCAGGTGGGCTTGTACAT-AAAAGCATGCAAATGggcccagcacagtggctcacgcctataatcacagca--gtgggaggccaagatgggcagatcacttgaggtcaggagttcaagaccagcctggcaaacatggtgaaaccccatctctact-------aaaaatacaaaaatC i ponAbe2.chr19 C 0 I 1170 s nomLeu3.chr10 103297615 180 - 106955855 GAGCTATATACTTCCAGGTGGACCTGTACAT-AAAAGCATGCAAATGggccgggcacagtggctcacgcctataatcacagca--gtgggaggccaagacgggcagatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctact------aaaaaatacaaaaatc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727157 186 + 59248254 GAGCTGTCTACTTGCAGGTGGGCTTGTACATAAAAAGCATGCAAAT-ggcccagtgcagtggctcatgcctataatcccagca--gtgggaggccgagacgggtagatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaatcccatttctacttaaaaaaaaaaatacaaaaata i macFas5.chr19 I 1 I 8 s papAnu2.chr19 47829504 182 + 51301725 GAGCTATCTACTTCCAGGTGGGCTTGTACAT-AAAAGCATGCAaat-ggcccagtgcagtggcttatgcctataatcccagca--gtgggaggccgagacgggtagatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaat-ccatctttacttaaaaaaaaaaaaaaaaaaa-- i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47542694 180 + 50890351 GAGCTATCTACTTCCAGGTGGGCTTGTACAT-AAAAGCATGCAAATGggcccagcacagtggctcatgcctataatcccagca--gtgggaggccga---ggtcagatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaatcccatttctacttaaaaaaaaaaa---aaaaata i chlSab2.chr6 I 3 I 8 s calJac3.chr22 45894445 179 + 49145316 GAGCTATATACTTCCAGGCGGGCTTGCACAT-TAAAGCATGCGAATGggccaggcgcggtggctcatgcctgtaatcccagcactgtgggaggcagagaggggcagatcacttga-gtcagtagttcaagaccagcctggccaacatggtgaaacctcgtctctacc-------aaaaatacaaaaat- i calJac3.chr22 I 3 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e rheMac3.chr19 60588132 703 + 64156825 I a score=66477.000000 s hg38.chr19_GL949747v2_alt 576474 46 + 729520 Gggccgggcgcggtggctcaaacctgtaatctcagcactttgggag s panTro4.chr19 59851342 46 + 63644993 Gggccaggcgcggtggctcaaacctgtaatctcagcactttgggag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103297795 46 - 106955855 gggccgggcgcactggctcaagcctgtaatctcagcacttacgcag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727351 46 + 59248254 ggtccagacacagtggctcaagcctgtaatcccagcactttgggag i macFas5.chr19 I 8 C 0 s papAnu2.chr19 47829689 46 + 51301725 ggtccagacacagtggctcaagcctgtaatcccagcgctttgggag i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47542882 46 + 50890351 ggtccagacacagtggctcaagcctgtaatcccagcactttgggag i chlSab2.chr6 I 8 I 298 s calJac3.chr22 45894624 46 + 49145316 gagccgggcatggtggcgcgtgcctgtaatcccagctactcaggag i calJac3.chr22 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e rheMac3.chr19 60588132 703 + 64156825 I a score=15286.000000 s hg38.chr19_GL949747v2_alt 576520 19 + 729520 accaaggtgggtgaatcac s panTro4.chr19 59851388 19 + 63644993 accaaggtgggtgaatcac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103297841 19 - 106955855 accaaggtgggtgaatcac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727397 19 + 59248254 gctgagacaggcagatcac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47829735 19 + 51301725 gctgaggcaggcagatcac i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45894670 19 + 49145316 gctgaagcaggagaattgc i calJac3.chr22 C 0 I 521 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e chlSab2.chr6 47542928 298 + 50890351 I e rheMac3.chr19 60588132 703 + 64156825 I a score=46618.000000 s hg38.chr19_GL949747v2_alt 576539 67 + 729520 --aagatcaggagttcaagaccagcctggccaaagtggtgaaaccccatctttactaaataca-aaaatt s panTro4.chr19 59851407 67 + 63644993 --gagatcaggagttcaagaccagcctggccaaagtggtgaaaccccatctttactaaataca-aaaatt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103297860 67 - 106955855 --gagatcaggagttcaagaccagcctggccaaagtggtgagaccccatctttactaaataca-aaaatt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727416 70 + 59248254 ctgaggtcgggagttcgagaccagcctgaccgacatggagaaattccgtctccactaaaaatacaaaatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47829754 70 + 51301725 ctgaggtcgggagttcaagaccagcctgaccgacatggagaaattccgtatctactaaaaatacaaaatt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e calJac3.chr22 45894689 521 + 49145316 I e chlSab2.chr6 47542928 298 + 50890351 I e rheMac3.chr19 60588132 703 + 64156825 I a score=46885.000000 s hg38.chr19_GL949747v2_alt 576606 146 + 729520 agctgggcacgatggctcacacctgtaatctcagcactttgggaggctgaggcagacagatcacctgaggtcgggagttcaaga-------------------------------ccagcctaagcaatatg-gagaaa-cccgtctctactaaaa------------------------------------------------------------------atac---aaaattagccaggtgtggt s panTro4.chr19 59851474 146 + 63644993 agctgggcacgatggctcacacctctaatctcagcactttgggaggctgaggcagatggatcacctgaggtcgggagttcaaga-------------------------------ccagcctaagcaatatg-gagaaa-cccatctctactaaaa------------------------------------------------------------------atac---aaaattagccgggtgtggt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103297927 147 - 106955855 agctgggcacaatggctcacacctgtaatctcagcactttgggaggctgaggcagatggatcacctgaggtcgggagttcgaga-------------------------------ccagcctaagcaacatg-gagaaaccccgtctctactaaaa------------------------------------------------------------------atac---aaaattagccgggtgtggt i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47829824 248 + 51301725 agctgggtgtggtggcccatgcctgtaatcccagctactcgggggtctgaggcaagagaattgcttgaacttgggagatgaaggttgcggtaagcagagatcgcgccattgcactccagcctgggcaccaagagtgaaattctgtttcaaaaaaaaaaaaaaaaaaatatatatatatatatatatacacacacacacacacacagagacacacatatacatatacacaaaaattagccgggtgtggt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e calJac3.chr22 45894689 521 + 49145316 I e chlSab2.chr6 47542928 298 + 50890351 I e macFas5.chr19 55727486 0 + 59248254 C e rheMac3.chr19 60588132 703 + 64156825 I a score=32490.000000 s hg38.chr19_GL949747v2_alt 576752 147 + 729520 ggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaactggggagacggaggttgtggtgagcagagattgcaccattgcactccagcctgggcaagaagagcgaaactccatctcaaaaaaaaaaaa s panTro4.chr19 59851620 147 + 63644993 ggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaactggggagacggaggttgcagtgagcagagattgcaccattgcactccagcctgggcaagaagagcgaaactccatctcaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47830072 144 + 51301725 ggtgcacgcctgtaatcctagctactcaggaggctgaggtaggagaattacttgaacccaggaaccagaggttgcagtgagccaagattgcaccactgcattccagcctgggt---gacagtgagactccatgcaaaaaaaaaaaaa i papAnu2.chr19 C 0 T 165 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e calJac3.chr22 45894689 521 + 49145316 I e nomLeu3.chr10 103298074 0 - 106955855 C e chlSab2.chr6 47542928 298 + 50890351 I e macFas5.chr19 55727486 0 + 59248254 C e rheMac3.chr19 60588132 703 + 64156825 I a score=1719.000000 s hg38.chr19_GL949747v2_alt 576899 18 + 729520 aaattagccaggtgtggc s panTro4.chr19 59851767 18 + 63644993 aaattagccaggtgtggc i panTro4.chr19 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e calJac3.chr22 45894689 521 + 49145316 I e nomLeu3.chr10 103298074 0 - 106955855 C e chlSab2.chr6 47542928 298 + 50890351 I e papAnu2.chr19 47830216 165 + 51301725 T e macFas5.chr19 55727486 0 + 59248254 C e rheMac3.chr19 60588132 703 + 64156825 I a score=76880.000000 s hg38.chr19_GL949747v2_alt 576917 302 + 729520 ggcccatgcctgtaatcctagctactcaggaggctgaggtaggag----aattacttgaacccaggaagcggaggttgcagtgagccaagatcgcaccactgcactccagcctggtgacagagagagactg---ttaaaaaaaaaaaaaaaa--CATCCAAATGGCCTTCTGATTCCATCCATTTCCAGCTCTGCCTGGGACaacagcttaggctctgggttcagaccgacccaggacaggatctgagccctgggtcacttattttctgcgtgGTTAGATTATGGAAATTTCACTTTCCCTGTCATTTTAT s panTro4.chr19 59851785 307 + 63644993 ggcccatgcctgtaatcctagctactcaggaggctgacgtaggag----aattacttgaacccaggaagcggaggttgcagtgagccaagatcgcaccactgcactccagcctggtgacagagagagactcagtttaaaaaaaaaaaaaaaaaTCATCCAAATGGCCTTCTGATTCCATCCATTTCCAGCTCTGCCTGGGACaacagcttaggctctgggttcagaccgacccaggacaggatctgagccctgggtcacttattttctgcgtgGTTAGATTATGGAAATTTCACTTTCCCTGTCATTTTAT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103298074 308 - 106955855 ggcccatgcctgtaatcctagctactcaggaggctgaggtaggagaattaattacttgaacccaggaagcagaggctgcagtgagccaagatcacaccactgcactccagcctggtgacagagagactcag---ttagaaaaaaaaaaaaaaaTCATCCAAATGGCCTTCTGATTACATCCATTTCCAGCTCTGCCTGGGACAATATCTTAGGCTCTGGGTTTAGACCGACCCAGGACAGGATCTGAGACCTGGATCAGTTATTTTCTGCACGGTTAGATTATGGAAATTTCACTTCCCTTGTCATTTTAT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e calJac3.chr22 45894689 521 + 49145316 I e chlSab2.chr6 47542928 298 + 50890351 I e papAnu2.chr19 47830216 165 + 51301725 T e macFas5.chr19 55727486 0 + 59248254 C e rheMac3.chr19 60588132 703 + 64156825 I a score=49279.000000 s hg38.chr19_GL949747v2_alt 577219 128 + 729520 TTCATGTTTAAGttttgtctttaactgacacattctacgtatataggggtatagtgtgatgttttggtgcaggta--------cac------ttcgtataacgatcaGGTAGGTGACTGTT--------------------TGTTTAACAATAGTTATTCTA s panTro4.chr19 59852092 128 + 63644993 TTCATGTTTAAGttttgtctttaactgacacattctacgtatataggggtatagtgtgatgttttggtgcaggta--------cac------ttcgtataatgatcGGGTAGGTGACTGTT--------------------TGTTTAACAATAGTTATTCTA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103298382 124 - 106955855 TTCACGTTTAGGttttgtctttaattgacacattctacgtatataggggtatagtgtgatgttttggtgcaggta--------cac------atcatataacaatcaGGCAGGTGAC------------------------TGTTTAACAATAGTTATTCTA i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45895210 158 + 49145316 TTCATGTTTAGGttttgtctttaaatgacacattctatatatttcggagcacagtgtgatgtttcggtgcacgtatcatgtatcacctgataattgtataattatcaagtaagTGACTTTTTTTTCTTTTTTTTTGTTTGCTGTTTAACAA----TACTCTA i calJac3.chr22 I 521 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e chlSab2.chr6 47542928 298 + 50890351 I e papAnu2.chr19 47830216 165 + 51301725 T e macFas5.chr19 55727486 0 + 59248254 C e rheMac3.chr19 60588132 703 + 64156825 I a score=72562.000000 s hg38.chr19_GL949747v2_alt 577347 127 + 729520 Agccaggcacagtggctaatgcctggaacgccagcactttgggaggccgaggcaggcagatcacttaaggccaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaacctcatctccactaaaagtg s panTro4.chr19 59852220 126 + 63644993 Agccaggcacagtggctcatgcctg-aacgccagcactttgggaggccgaggcaggcagatcacctaaggccaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaacctcatctctactaaaagtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103298506 127 - 106955855 Agccaggcacagtggctcatgcctggaaccccagcactttgggaggccgaggcagacagaacacctgaggccaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaaccccatctctactaaaagta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727486 159 + 59248254 agctgggtgtggtggcccatgcctgtaatcccagctcctcgggggtctgaggcaggtgaatcacttgaacttgggagacgaaggttgcggtaagcagagattgcgccattgcactccagcctgggcaacaagagtgaaactctgtctcaaaaaaaaaaa i macFas5.chr19 C 0 I 69 s calJac3.chr22 45895368 126 + 49145316 Agcggggcgtggtggctcacgcctgtaatcccagcactttgggtggccgaggcaggtggatcacataaggtcaggagtttgaga-------------------------------ccagcctggccagtatg-gtgaaacttcatctctactaaagta- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e chlSab2.chr6 47542928 298 + 50890351 I e papAnu2.chr19 47830216 165 + 51301725 T e rheMac3.chr19 60588132 703 + 64156825 I a score=211373.000000 s hg38.chr19_GL949747v2_alt 577474 129 + 729520 caaaaattagccagg-catggtggagggcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacctgggaggcagaagttgcagtcagccaagattacaccactgcattccagtc s panTro4.chr19 59852346 130 + 63644993 caaaaattagccggggcatggtggagagcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacctgggaggcagaagttgcagtcagccaagattacaccactgcattccagtc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103298633 129 - 106955855 caaaaattagccagg-catggtggagggcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgcggtgagccgagattacaccactgcactccagtc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727714 129 + 59248254 caaaaattagccggg-tgtggtggtgcacgcctgtaatcctagctactcaggaggctgaggtaggagaattacttgaacccaggaaccagaggttgcagtgagccaagatcacaccactgcattccagcc i macFas5.chr19 I 69 C 0 s papAnu2.chr19 47830051 129 + 51301725 caaaaattagccggg-tgtggtggtgcacgcctgtaatcctagctactcaggaggctgaggtaggagaattacttgaacccaggaaccagaggttgcagtgagccaagattgcaccactgcattccagcc i papAnu2.chr19 T 165 C 0 s chlSab2.chr6 47543226 129 + 50890351 caaaaattagccggg-tgtggtggtgcacgcctgtaatcctagctactcaggaggctgaggtaggagaattacttgaacccaggaaccagaggttgcagtgagccaagatcacaccactgcattccagcc i chlSab2.chr6 I 298 C 0 s calJac3.chr22 45895494 129 + 49145316 caaaaattagctggg-cgtggcggcaggcacctagaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagattgcaccactgcattccagcc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e rheMac3.chr19 60588132 703 + 64156825 I a score=43594.000000 s hg38.chr19_GL949747v2_alt 577603 25 + 729520 tgggcgacagagtgagacttcatcc s panTro4.chr19 59852476 25 + 63644993 tgggcgacagagtgagacttcatcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103298762 25 - 106955855 tgggcgacagagtgagacttcatcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60588835 25 + 64156825 tgggggacagggtgagactccgtcc i rheMac3.chr19 I 703 C 0 s macFas5.chr19 55727843 25 + 59248254 tgggtgacagagtgagactccatcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47830180 23 + 51301725 tgggtgaca--gtgagactccatgc i papAnu2.chr19 C 0 I 256 s chlSab2.chr6 47543355 25 + 50890351 tgggtgacagagtgagactccacgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45895623 24 + 49145316 -tggcagcagagtgagactgtcttt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I a score=526161.000000 s hg38.chr19_GL949747v2_alt 577628 265 + 729520 aaaaaaaaaa---aaaTGAATCTCAGAAATGACCACTAGCTAGAATTTCTGAACAGGAACAGGTCTTCAACCCTATGCAATCTCTTGAATATTTTTCTAACCATAATTTTAATGTGAACAGGTAGCTCACGCTGGGCTTCTTTCCATATAACAAGATTCAGCCAACTATAGTTCGTGGGTCAATTCCAACCTGCCACCTATGTCTTTTACAAATAAGGAttttt-gttgagtttttttt---tgtttttttcttgagacggagtctcactct s panTro4.chr19 59852501 271 + 63644993 aaaaaaaaaagaaaaaTGAATCTCAGAAATGACCACTAGCTAGAATTTCTGAACAGGAGTATGTCTTCAACCCTATGCAATCTCTTGAATATTTTTCTAACCATAATTTTAATGTGAACAGGTAGCTCACGCTGGGCTTCTTTCCATATAACAAGATTCAGCCAACTATAGTTCGTGGGTCAATTCCAACCTGCCACCTATGTCTTTTATAAATAAGGATTTTT-GTTGAGttttttttgtttgtttttttcttgagacggagtctcactct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103298787 263 - 106955855 aaaaaaagaa---aaaagaaTCTCATAAATGAACACTAGCTAGAATTTCTGAACAGGAATAGGTCTTCAACCCTATGCAATCTCTTGAATATTGTTCTAACCATAATTTTAATGTGAACAGGCAACTCATGCTGGGCTTCTTTCCTTATAACAAGATTCAGCCAACCACAGTCCATGGGTCAATTCCAACCTGCCACCTATGTTTTTTATAAATAAGGAttttt-gttgagtttttttt-----tttttttcttgagacagagtctcactct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60588860 263 + 64156825 -aaaaaaaaa---aaaaaaaTCTCAGAAATGAACACTAGCTAGAATTTCCGAACAGGAATAGGTCTTCAACCCTACGTAATCTCTTGAATATTGTTCTAACCACGATCTTAATGTGAACAGGTAACTCAGGCCGGGCTTCTACCCATGTAACAAGATTCAGCCAACAACAATTCATGGGTCAATTCCAACCTGCCACCTATGT-TTTTATAAATAAGGTTTTTTGGTTGAGtttttttt----atttttttcttgagacggagtctcgctct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55727868 263 + 59248254 -aaaaaaaaa---aaaaaaaTCTCAGAAATGAACACTAGCTAGAATTTCCGAACAGGAATAGGTCTTCGACCCTACGCAATCTCTTGAATATTGTTCTAACCACGATCTTAATGTGAACAGATAACTCAGGCCGGGCTTCTACCCATGTAACAAGATTCAGCCAACAACAATTCATGGGTCAATTCCAACCTGCCACCTATGT-TTTTATAAATAAGGTTTTTTGGTTGAGtttttttt----atttttttcttgagacggagtctcgctct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47830459 259 + 51301725 ---aaaaaaa---aaaaaatactcagaaatgAACACTAGCTAGAATTTCCGAACAGGAATAGGTCTTCGACCCTATGCAATCTCTTGAATATTGTTCTAACCACGATCTTAATGTGAACAGGTAACTCAGGCTGAGCTTCTTCCCATGTAACAAGATTCAGCCAACAACAGTTCATGGGTCAATTCCAACCTGCTACCTA-GG-TTTTATAAATAAGG-TTTTTGGttgagtttttttt----atttttttcttgagacggagtctcgctct i papAnu2.chr19 I 256 C 0 s chlSab2.chr6 47543380 264 + 50890351 aaaaaaaaaa---aaaaaaaTCTCAGAAATGAACACTAGCTAGAATTTCCAAACAGGAATAGGTCTTCAACCCTATGCAATCTCTTGAATATTGTTCTAACCACGATCTTAATGTGAACAGGTACCTCAGGCTGGGCTTCTTCCCACGTAACAAGATTCAGCCAACTACAGTTCGTGGGTCAATTCCAACCTGCCACCTAGGT-TTTTATAAATAAGGTTTTTTGGTTGCGtttttttt----atttttttcttgagacagagtctcgctct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45895647 225 + 49145316 ---aaaaaga---aaaagaaTCTCAGAAATGAACACTAGCTAGAATTTCTGAACAGGAATAGGTCTTCAACCCTATGCAAACTCTTGAATGTTGTTCTAACCATGATTTCAATGTGAACAGGTAGCACACACTGAGCTGCTTCCCACATAACAAGATTCAGCCAGCAACAATTCATGGGCCAATTCCAGCCTGACACCTGTG-----------------------------------------Gtttctttcttcaggtggaatctcactaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I a score=2023587.000000 s hg38.chr19_GL949747v2_alt 577893 739 + 729520 gtcgcccgggctggagtgcagtggcaccatctcagctcactgcagcctctgcctcccagattcaagcgattctcctacctcagccttctg-agtagctggtactat-aggcacgcaccaccaagcctggttaatttttgtattttttagtagcgatgggttttcaccatgttggccaggctggtctcgaacct--------taggtgatctgcccaccATTcaccacctgttccccaataacctatggaaataaaaGTTTA-AAAAAAGGTGCCACTGGCCCTACCACATAACTCAATCTACCTCCAATAGCAGGCAGTACTATGTCATAGGAATTTGAAAGAACACACACAAAGCATCAGATCCGAGAACCAACTACTCATCTCAAATCTTCCTTCATAGCAGGAAGAGGCTCTGCTGACATGCAAATATTAACATGTTTCTACCTGTATCTGCCTGGtttttttt-------gtttctttgtttttttgagaaggagtcttgttctgtcgcccaggctggagtgcagtggtgcgatctcggctcactgcaacctccgccttccaggttcacgccattctcctgtctcatcctcccaagtagctgggactacaggcatccgccaccacacctggctaatttttggtatttttagtacagacagggtttcaccatgttaaccaggatggtctccatctcctgacctcatgatccacccgcctcggcctcccaaagtgctgggattacaggcatgagc s panTro4.chr19 59852772 744 + 63644993 gtcgcccaggctggagtgcagtggcgccatctcagctcactgcagcctctgcctcccggattcaagcgattctcctacctcagccttctg-agtagctggtactat-aggcacgcaccaccaagcctggttaatttttgtattttttagtagcgacgggttttcaccatgttggccaggctggtcttgaacct--------taggtgatctgcccaccATTcaccacctgttccccaataacctatggaaataaaaGTTTA-AAAAAAGGTGCCACTGGCCCTACCACATAACTCAATCTACCTCCAATAGCAGGCAGTACTATGTCATAGGAATTTGAAAGAACACACACAAAGCATCAGATCCGAGAACCAACTACTCACCTCAAATCTTCCTTCATAGCAGGAAGAGGCTCTGCTGACATGCAAATATTAACATGTTTCTACCTGCATCTGCCTGGTttttttttttgtttgtttctttgtttttttgagaaggagtcttgttctgtcgcccaggctggagtgcagtggtgca--ctcagctcactgcaacctccgccttccaggttcatgccattctcctgtctcatcctcccaagtagctgggactacaggcatccgccaccacacctggctaatttttggtatttttagtacagacagggtttcaccatgttaaccaggatggtctccatctcctgacctcatgatccacccgcctcggcctcccaaagtgctgggattacaggcatgagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56763559 735 + 60714840 gtcacccaggctggagtgcgtaggcgccatctcagctctctgcagcctttgcctgccagattcaagcgatt-tcctacctcagccttctg-agtagctggtactat-aggggagcaccaccaagcctggttaatttttgtattttttagtagcgacaggttttcaccatgttggccaggctggtctcgaacct--------taggtgatctgcccaccATTcaccacctgttccccaataacctatggaaatagaaGTTTA-AAAAAAGGTGTCACTGGCCCTACCATATAACTCAATCTACCTCCAATAGCAGGCAGTACTATGTCATAGGAATTTGAAAGAACATACACAAAGCATCAGATCCGAGAACCAACTGCTCATCTCAAATCTTCCTTCATAGCAGGAAGAGGCTCTGCTGACATGCAAATATTAACATGTTTCTACCTGTATCTGCCTGGtttttttt-------gtttgtttatttgtttg---aggagtctcgctctgttgcccaggctggagtgcagcggtgcgatctcggctcactgcaacctccgccttccaggttcacgccattctcctgtctcagcctcccaagtagctgggactacaggcatccgccaccacacctggctaatttttggtatttttagtacagacagggtttcaccatgttaaccaggatggtctccatctcctgacctcatgatccacccgcctcggcctcccaaagtgttgggattacaggcgtgagc i ponAbe2.chr19 I 1170 C 0 s nomLeu3.chr10 103299050 734 - 106955855 gtcacccaggctggagtgcagtggcgccatctcagctcactgcagcctctgcctcccggattcaagcgattctcctacctcagccttctg-agtagctggtactat-aggcacgcaccaccaagcctggttaatttttgtattttttagtagcaacgggttttcaccatgttggccaggctggtctcgaacct--------taggtgatctgcccaccATTcactacctgttccccaataacctatggaaataaaaTTTT--TCAAAAGGTGTCACTGGCCCTACCATATAACTCAACCTACCTTGAATAGCAGGCGGTACCATGTCATAGGAATTTGAAAGAACACACACAAAGCATCTGATCCAAGAACCAACTGCTTATCTCAAATCTTCCTTCATGGCAGGAAGAAGCTCTGCTGACATGCAAATATTAACATGTTTCTACCTGTATCTGCCTGGtttttttt-------g----tttgtttttttgagaagaagtcttgctctgttgcccaggctggagggcagtggcgcgatctcggctcactgcaacttccgccttccaggttcatgccattctcctgtctcagcctcccaagtagctgggactacaggcatccgccaccacacctggctaatttttggtatttttagtacagacagggtttcaccatgttaaccaggatggtctccatctcctgacctcatgatccacctgcctcagcctcccaaagtgctgggattacaggcatgagc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60589123 730 + 64156825 gttgcccaggttggagtacggtggcgcgatctcagctcactgcagcctctgcct-ccggattcaagcgattctcctacctcagccttctg-agtagctggtactac-aggcacgcaccaccaagcctggttaatttttgtattttttagtagagacgggttttcaccatgttggccgggttggtctcgaaccc--------taggtgatttgcccgccATTcaccacctgttccctaataacctatggaaataaaaaTTTT-ACAAAAGGTGTCACTGGCCCTACCATGTAACTTAATCTACCTCCAATAGCAGGCAGTGCTATGTCATATGAATTTGAAAGAACACACACAAAGCATCAGATCCAAGAACCAATTGCCCATCTCAAATCTTCCTTCGTAGCAGGAAGAGGTTCTGCAGACATGCAAATATTAGCATGCTTCTACCTGTATCTGCCTG----ttttt-------g----ttgttgtttttgagacagagtctcgctctgtcacccaggctggagtgcagtggtgagatcttggcttgctgcaacctccgccttccgggtttatgccattctcctgtctcagcctcccaagtagctgggactacaggcacccaccaccatgcctggctaatttttggtatttttagtggatacggggtttcaccatgttagccaggatggtcttggtctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55728131 730 + 59248254 gttgcccaggttggagtgcggtggtgcgatctcagctcactgcagcctctgcct-ccggattcaagcgattctcctacctcagccttctg-agtagctggtactac-aggcacgcaccaccaagcctggttaatttttgtattttttagtagagacgggttttcaccatgttggccgggttggtctcgaaccc--------taggtgatttgcccgccATTcaccacctgttccccaataacctatggaaataaaaaTTTT-ACAAAAGGTGTCACTGGCCCTACCATGTAACTTAATCTACCTCCAATAGCAGGCAGTGCTATGTCATATGAATTTGAAAGAACACACACAAAGCATCAGATCCAAGAACCAATTGCCCATCTCAAATCTTCCTTCGTAGCAGGAAGAGGTTCTGCAGACATGCAAATATTAGCATGCTTCTACCTGTATCTGCCTG----ttttt-------g----ttgttgtttttgagacagaatctcgctctgtcacccaggctggagtgcagtggtgagatcttggcttgctgcaacctccgccttccgggtttatgccattctcctgtctcagcctcccaagtagctgggactacaggcacccactaccatgcctggctaatttttggtatttttagtggatacggggtttcaccatgttagccaggatggtcttgatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47830718 731 + 51301725 gttgcccaggctggagtgcggtggtgcgatctcagctcactgcagcctctgcct-ccggattcaagcgattctcctacctcagccttctgaagtagctggtactac-agacacGCAcaaccaagcctggttaatttttttattttttagtagagatgggttttcaccatgttggccgggttggtctcgaaccc--------taggtgatttgcccgccattcaccacctgttccccaataacctatggaaataaaaatttt-acaaaaggtGTCACTGGCCCTACCATATAACTCAATCTACCTCCAATAGCAGGCAGTGCTATGTCATATGAatttgaaagaacacacacaaagcatCAGATCCAAGAACCAATTGCCCATCTCAAATCTTCCTTCGTAACAGGAAGAGGTTCTGCAGACATGCAAATATTAGCATGCTTCTACCTGTATctgcctg----ttttt-------g----ttgttgtttttgagacggagtctcgctctgtcacccaagctggagtgcagtggtgagatcttggctcgctgcaacctccgccttccgggtttatgccattctcctgtctcagcctcccaagtagctgggactacaggcacccaccaccatgcccggctaatttttggtaattttagtggatacggggtttcaccatgttagccaggatggtcttgatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47543644 730 + 50890351 attgcccaggttggagtgcggtggcgcgatctcagctcactgcagcctctgcct-ccggattcaagcgattctcctacctcagccttctg-agtagctggtactac-aggcacgcaccaccaagcctggttaatttttgtattttttagtagagacgggttttcaccatgttggctgggttggtctcgaaccc--------taggtgatttaccagccATTcaccacctgtttcccaataacctatggaaataaaaaTTTT-ACAAAAGGTGTCACTAGCCCCACCCTATAACTCAATCTACCTCCAATAGCAGGCAGTGCTATGTCATATGAATTTGAAAGAACACACACAAAGCATCAGATCCAAGAACCAATTGCCCATTTCAAATCTTCCTTCATAACAGGAAGAGGTTCTGCAGACATGCAAATATTAGCATGCTTCTACCTGTATCTGCCTG----ttttt-------g----ttgttgtttttgagacggagtctcgctctgtcacccaggctggagtgcagtggtgagatcttggctcactgcaccctccgccttctgggttcacgccattctcctgcctcagcctctcaagtagctgggactacaggtacccaccaccatgcccaggtaatttttggtatttttagtggatacggggtttcaccatgttagccaggatggtctcgatctcctgacctcatgatccacccgcctcggcctcccaaagtgctgggattacaggcatgagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45895872 684 + 49145316 atcg-ccaggctggagtgcagtggcacgatctcagctccctgcaacctctgcctcccagatctaagtgattctcctgcctcagcctcccg-agtagctggtactacaaggcttgccccaccacgccaggctaatttttata-tttttagtagagagggggtttcac---attggccaggctggtctcgaaccccttgaccttaggtgatctgcccaccATTCACCACCCGTTCTCCAATAATGTGTGGAAATAAAAATTTTAAAAAAAGATGTCACTGGCCCTACCACATAACTCAATCTACCTCTGATAGCAGAGAGTAC--TGTCATGTGAATTTGAAAGAACATCCACAAAGCATCAGATCCAAGAATGAATTGGCCATCTCAAATCTTCCTTCACAGCAGCAAGAGG---------CATGAAAATATTAACAGATTTTTACCTGTCTCTGCCCG--tttcttt-------t----tttttttttttgagatggagtctcactctgtgacccaggctggagagcaatgatgtgatgtcggctcaccacaacctctgcccct-------------------------------------------gattacaggcacacaccaccacgcctggctgattttttgtctttttagtagagacaaggtttcaccttgttagccaggatggtctccatctcctgaccttgtgatctgcccaccttggcctcccaaagtgttgggattacaggggtgagc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I a score=278913.000000 s hg38.chr19_GL949747v2_alt 578632 123 + 729520 caccacgcctggccTCTGCCTGTTCT------------TTAATTCTTACCAGGTTTTTAAAAGTTACATTTG--------AAATGAATTAACAAGTACTTTCATGTCTCTCCTGCTTGAATTCA-TGTG----------------------------------------------------------------------------CACACACACACACAC-- s panTro4.chr19 59853516 123 + 63644993 caccacgcctggccTCTGCCTGTTCT------------TTAATTCTTACCAGGTTTTTAAAAGTTACATTTG--------AAATGAATTAACAAGTACTTTCATGTCTCTCCTGCTTGAATTCA-TGTG----------------------------------------------------------------------------CACACACACACACAC-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56764294 122 + 60714840 caccgcgcctggccTCTGCCTGTTCT------------TTAATTCCTACCAGGTTTTTAAAAGTTACATTTG--------AAATGAATTAACAAGT-CTTTCATCTCTCTCCTGCTTGAATTCA-CGTG----------------------------------------------------------------------------CACACACACACACAC-- i ponAbe2.chr19 C 0 I 435 s nomLeu3.chr10 103299784 123 - 106955855 cactgtgcctggccTCTGCCTGTTCT------------TTAATTCTTACCAGGTTTTTAAAAGTTACATTTG--------AAATGAATTAACAAGTACTTTCATCTCTCTCCTGCTTGAATTCA-CGTG----------------------------------------------------------------------------cacacacatacacac-- i nomLeu3.chr10 C 0 I 14 s rheMac3.chr19 60589853 165 + 64156825 caccgtgcctggccTCTGCCTATTCT------------TTAATTCTTATCAAGTTCTTAAAAGTTACATTTG--------AAATGAATTAACCAGTACTTTCTTATCTCTCCTGCTGGAATTCA-CTCGCATGcacacgtgcgcacacacacgcacgcgcacata----------------------------------catacacacacacacacacac-- i rheMac3.chr19 C 0 I 18 s macFas5.chr19 55728861 197 + 59248254 caccgtgcctggccTCTGCCTATTCT------------TTAATTCTTATCAAGTTCTTAAAAGTTACATTTG--------AAATGAATTAACCAGTACTTTCTTCTCTCTCCTGCTGGAATTCA-CTCGCATGCACACGTGCGCACACACACGCATGCGcacatacacatacacacac--acacacacacacacacacgcacgcgcacacacacacacac-- i macFas5.chr19 C 0 I 18 s papAnu2.chr19 47831449 176 + 51301725 caccgtgcctggcctctgcctATTCT------------TTAATTCTTGTCAAGTTCGT-AAAGTTACATTTG--------AAATGAATTAACCAgtactttcttctctcttctgcttgaaTTCA-CTtgcatgcacacgtgcgcacgcacatgc----------------------acatacacacatacacatacacatacacacacacacacacacac-- i papAnu2.chr19 C 0 I 18 s chlSab2.chr6 47544374 137 + 50890351 caccgtgcccggccTCTGCCTATTCT------------TCAATTCTTATCAAGTTCTTAAAAGTTACATTTG--------AAATGAATTAACCAGTACTTTCTTCTCTCTCCTCCTTGAATTCA-CTTGCATGCACACGTGCG--------------------------------------------------------------CGcacacgcacacac-- i chlSab2.chr6 C 0 I 18 s calJac3.chr22 45896556 120 + 49145316 caccacacccagcc----------------------------TTCTTACCAAGTTCTTACCAGTTACATTTT--------AAATGAATTA---AGGACTTCCATATCTCTCCTGCTTGAATTca-cata----cacacgcgcacacgca--------------------------------------------------------cgcacacacgcacac-- i calJac3.chr22 C 0 I 2 s canFam3.chr1 102623198 144 + 122678785 CACTATGTCTTGCTTTTTTTTTTTTTAACATCCTCTTGCCAGGTCTCATCAGATCTGTCAGTATCATACTTGGGGTATTCAGAGAAGCTATTAAATGCTTGCA--TCTGTGCTACTTGAATCCAGTATG----------------------------------------------------------------------------CACATGCACACAAATAA i canFam3.chr1 n 23589 C 0 a score=1041552.000000 s hg38.chr19_GL949747v2_alt 578755 291 + 729520 CCAGCAGGGACTTACACCAAGGTCTGCAGTTTACAATCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCAATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTTCTTGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAACTGGCTTCTGTAAGACGACAGTTTTCCAACCTGCAAAAATATGAAACAAATGGTAGAAGGATGAGAACATTTCCACAACTCCAACCTGCTCAGTGATGTCCACATGCTAGGGTACTCAGCTTCAGCCCTTCCTGT s panTro4.chr19 59853639 291 + 63644993 CCAGCAGGGACTTACACCAAGGTCTGCAGTTTACAATCAGGGTAACTCAAGCCTTCACACAGAAACTTCACCCCTGTATCCCCAATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTTCTTGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAACTGGCTTCTGTAAGACGACAGTTTTCCAACCTGCAAAAATATGAAACAAATGGTAGAAGGATGAGAACATTTCCACAACTCCAACCTGCTCGGTGATGTCCACATGCTAGGGTACTCAGCTTCAGCCCTTCCTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56764851 291 + 60714840 CCAGCAGGGACTTACACCAAGGTCTGCAGTTTACACTCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCAATGAGGTTCTTGGCCAAGCACAGGTGTGTCAGCTTCTTGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAACTGGCTTCTGTAAGACGACAGTTTTCCAACCTGCAAAAATATGAAACAAAAGGTAAAAGGATGAGAACATTTCCACAACTCCAACCTGCTTGGCGATGTCCACATGCTAGGGTCCTCAGCTTCAGCCCTTCCTGT i ponAbe2.chr19 I 435 C 0 s nomLeu3.chr10 103299921 291 - 106955855 ccaacaGGGACTTACACCAAAGTCTGCAGTTTACAGTCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCAATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTTCTGGCTGACAACCAAGACAGCAGCAAGGTCCTTACAACTGGCTTCTGTAAGACGACAGTTTTCCAACCTGCAAAAATATGAAACAAATGGTAAAAGTATGAGAACATTTCCACAACTCCAACCTGCTTGGCGATGTCCACGTGCTAGGGTCCTCAGCTTCAACCCTTCCTGT i nomLeu3.chr10 I 14 C 0 s rheMac3.chr19 60590036 291 + 64156825 CCAGCAGAGACTTACACCAAGGCCTGCAGTTTACACTCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCGATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTGCTGGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAGCTGGCTTCTGTAAGACGACAGTTTTCTAACCTGCAAAAGTATGAAACAAATGGTAAAAGGATGAGAACATTTCCACAACTCCAACCTGCTTGGCGATATCCACATGCTAGGGTCCTCAGCTTCAGCCCTCCCTGT i rheMac3.chr19 I 18 C 0 s macFas5.chr19 55729076 291 + 59248254 CCAGCAGAGACTTACACCAAGGCCTGCAGTTTACACTCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCGATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTGCTGGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAGCTGGCTTCTGTAAGACGACAGTTTTCTAACCTGCAAAAGTATGAAACAAATGGTAAAAGGATGAGAACATTTCCACAACTCCAACCTGCTTGGCGATATCCACATGCTAGGGTCCTCAGCTTCAGCCCTCCCTGT i macFas5.chr19 I 18 I 303 s papAnu2.chr19 47831643 291 + 51301725 ccagcaGAGACTTACACCAAGGCCTGCAGTTTACACTCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCAATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTGCTGGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAACTGGCTTCTGTAAGACGACAGTTTTCCAACCTGCAAAAGTATGAAACAAATGGTAAAAGGATGAGAACATTTCCACAACTCCAACCTGCTTGGCGATGTCCACATGCTAGGGTCCTCAGCTTCAGCCCTCCCTGT i papAnu2.chr19 I 18 C 0 s chlSab2.chr6 47544529 291 + 50890351 CCAGCAGAGACTTACACCAAGGCCTGCAGTTTACACTCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCGATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTGCTGGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAACTGGCTTCTGTAAGACGACAGTTTTCTAACCTGCGAAAGTATGAAACAAATGGTAAAAGGATGAGAACATTTCCACAACTCCAACCTGCTTGGCGATGTCTACATGCCAGGGTCCTCAGCTTCAGCCCTCCCTGT i chlSab2.chr6 I 18 C 0 s calJac3.chr22 45896678 290 + 49145316 CCAGCAGGGACTTACACCAGGGTCTGCAGTTTACAGTCGGGGTAACTCAAGCCCTCACACAGCAACTCCACCCCTCTATCCCCGATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGATGCTGGTTGACAATCAAGACATTAGCAAGCTCCTTGCAACTGGCTTCTGTAAGACGACAGTTTTCCAACCTGCAAAAACATGAAACACATGGTCACATGATAAGAACGCTTCCCAAACTCCAACCTGCTC-GCCATGTCCACGTGCCGGGGTCCTCAGCATCTGCCCTGCCCGT i calJac3.chr22 I 2 C 0 s canFam3.chr1 102623342 290 + 122678785 CTAGCATGGACTTACACCAGCATCTGTAGTTGACAGTCAGGGTAACTCAAGCCTTCACACAGAAGCTTTACCCCATCATCTCCCAGAGTGTTCTTTGCCAAACTCAGGTGCGTCAGCCTCTGGTTGACAATCAAAGCTGAAGAGAGCTCTTTGCAACAGGCTTCTGTAAGTTGACAGTTTTCCAACCTGCCAAAGCACCACACAAATGGTAAGAGGGTGAGAACATTTCCAAAAC-CCAATTTTCTTGGCTGTCCCTAAAGGCCAGAGGCCCCATCTATGGCTCATCTTGT i canFam3.chr1 C 0 I 16 a score=206281.000000 s hg38.chr19_GL949747v2_alt 579046 71 + 729520 TCATCCCCTGC--CCTCTGTCCTGTGGGAGTCATCATG-------------GCCACAAAAGAGCAGGAAGGCGAGAAGGCCAAGAT s panTro4.chr19 59853930 71 + 63644993 TCATCCCCTGC--CCTCTGTCCTGTGGGAGTCATCATG-------------GCCACAAAAGAGCAGGAAGGCGAGAAGGCCAAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765142 71 + 60714840 TCATCCCCTGC--TCTCTGTCCTGTGTGAGTCATCACG-------------GCCACAAAAGAGCAGGAAGGCGAGAAGGCCAAGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103300212 71 - 106955855 TCATCCCCTGC--CCTCTGTCCTGTGCGAGTCATCACG-------------GCCACAAAAGAGCAGGAAGGCGAGAAGGCCAAGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60590327 71 + 64156825 TCATCCCCTGC--CCCCTGTCCTGTGCAAGTCATCACG-------------GCCACGAAAGACCAGAAATGCGAGAAGGCCAAGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55729670 71 + 59248254 TCATCCCCTGC--CTTCTGTCCTGTGCAAGTCATCACG-------------GCCACGAAAGACCAGAAATGCGAGAAGGCCAAGAT i macFas5.chr19 I 303 C 0 s papAnu2.chr19 47831934 71 + 51301725 TCATCCCCTGC--CCCCTGTCCTGTGCAAGTCATCACG-------------GCCACGAAAGACCAGAAATGCGAGAAGGCCAAGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47544820 71 + 50890351 TCATCCCCTGT--CCTCTGTCCTGTGCAAGTCATCATG-------------GCCACAAAAGACCAGAAATGCGAGAAGGCCAAGAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45896968 70 + 49145316 TAATCCCCTGC--CCTCTGTCCTGAGCG-GTCGTCACA-------------GCCGCAAAAGACCGGGAATGCGAGAAGGCCAAGAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102623648 83 + 122678785 tcatctatagcatctatagctctatagcTCTCATCATGTGCTTAACACTCAATCATGAAGGA---AGGATGAGGGAATGATAAGAT i canFam3.chr1 I 16 C 0 a score=94809.000000 s hg38.chr19_GL949747v2_alt 579117 41 + 729520 GCAGCGGTCCACCTGGAGCCATCACAGGACACAGGTG-----------------------------ttgt s panTro4.chr19 59854001 41 + 63644993 GCAGCGGTCCACCTGGAGCCATCACAGGACACAGGTG-----------------------------ttgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765213 50 + 60714840 GCAGCGGTCCACCTGCAGCCATCACAGGACACCGGTGttctttcg--------------------tttgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103300283 70 - 106955855 GCAGCAGTCCACCTGGAGCCATCACAGGACACAGGTGTTCTTTCGtttgttttttttttttttttttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60590398 41 + 64156825 GTTGCGGTCCACCTGGAGCCGTCACAGGACACAGGTG-----------------------------ttgt i rheMac3.chr19 C 0 I 180 s macFas5.chr19 55729741 41 + 59248254 GTAGCGGTCCACCTGGAGCCATCACAGGACACAGGTG-----------------------------ttgt i macFas5.chr19 C 0 I 181 s papAnu2.chr19 47832005 41 + 51301725 GTAGCGGTCCACCTGGAGCCCTCACAGGACACAggtg-----------------------------ttct i papAnu2.chr19 C 0 I 693 s chlSab2.chr6 47544891 41 + 50890351 GTAGCGGTCCACCTGGAGCCGTCACAGGACACAGGTG-----------------------------ttct i chlSab2.chr6 C 0 I 9 s calJac3.chr22 45897038 39 + 49145316 GCAGCGGGCCACCTGTAACCATCTCAGGAAGCAGCTG-----------------------------TT-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 102623731 0 + 122678785 C a score=27454.000000 s hg38.chr19_GL949747v2_alt 579158 11 + 729520 ttttgagacgg s panTro4.chr19 59854042 11 + 63644993 ttttgagacgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765263 11 + 60714840 ttttgagacag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103300353 11 - 106955855 ttttgagacgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60590619 11 + 64156825 ttttgagacgg i rheMac3.chr19 I 180 C 0 s macFas5.chr19 55729963 11 + 59248254 ttttgagacgg i macFas5.chr19 I 181 C 0 s papAnu2.chr19 47832739 11 + 51301725 ttttgagacgg i papAnu2.chr19 I 693 C 0 s chlSab2.chr6 47544941 11 + 50890351 ttttgagatgg i chlSab2.chr6 I 9 I 175 e canFam3.chr1 102623731 0 + 122678785 C e calJac3.chr22 45897077 0 + 49145316 C a score=273560.000000 s hg38.chr19_GL949747v2_alt 579169 106 + 729520 agtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggttcactgccaatcgccgcctcccaggtttacaccattctgctgactcagcctcctgagta s panTro4.chr19 59854053 106 + 63644993 agtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggttcactgccaatctccgcctcccaggtttacaccattctcctgactcagcctcctgagta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765274 106 + 60714840 agtctcgctctgtcgcccaggctggagtgcagtggcacgatctcagctcactgccaatctccgcctcccgggttcacgccattctcctgactcagcctcctgagta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103300364 105 - 106955855 agtctcgctctgtcgcccaggctggagtgcagtggtgcaatctcggctcactg-caagctccgccgcccaggttcacgccattctcctgcctcagcctcctgagta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60590630 106 + 64156825 agtctcgctctgtcgcccaggctggagtacattggcgctatctcggctcactgcaaagctctgcctcctgggttcacaccattctcctgccttagtctcccgagta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55729974 106 + 59248254 agtctcgctctgtcgcccaggctggagtacattggcgctatctcggctcactgccaagctctgcctcctgggttcacaccattctcctgccttagtctcccgagta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47832750 106 + 51301725 agtctcactctgtcgcccaggctggagtacattggcgctatctcggctcactgccaagctctgcctcctgggttcacaccattctcctgccttagtctcccgagta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47545127 106 + 50890351 agtctcgctctgtcgcccaggctggaatgcattggcgctatctcggctcactgccaagctccgcctcctgggttcacgccattctcctgccttagtctcccgagta i chlSab2.chr6 I 175 C 0 s calJac3.chr22 45897077 80 + 49145316 -------------------------Tgtgcagtggcgccatctcggctcacag-caacctccacctcccgggctcaagcgattctcctgcctcagcctcctgagta i calJac3.chr22 C 0 C 0 e canFam3.chr1 102623731 0 + 122678785 C a score=288747.000000 s hg38.chr19_GL949747v2_alt 579275 132 + 729520 gctgggactacaggcgc-----------------------ccaccacacctggataattttttgtattttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcttgacctcgtgatctccccgccttggcctcccaacgt s panTro4.chr19 59854159 155 + 63644993 gctgggactacaggcccacctactgggtataaaaaattatccaccacacctggataattttttgtattttttagtagagacggagttttaccatgttagccaggatggtctcgatctcttgacctcgtgatctccccgccttggcctcccaacgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765380 132 + 60714840 gctgggactacaggcac-----------------------ccaccacgcctggataattttttgtattttttagtagagatggggtttcaccgtgttagccaggatggtctcaatctcttgacctcgtgatccacccgccttggcctccaaacgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103300469 132 - 106955855 gctgggactacaggcgc-----------------------ccaccacgcctggataatttttcgtattttttagtagagacggggtttcaccatgttagccaggatggtctcaatctcttgacctcgtgatctgcccgccttggcctcccaacgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60590736 135 + 64156825 gctgggactacgggcgcccg--------------------ccaccgcacccggctaattttttgtattttttagtagaggtggggtttcaccatgttagccaggatggtctcgatctcttggcctcgtgatccgcccgccttggtctcccaaagt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55730080 135 + 59248254 gctgggactacaggcgcccg--------------------ccaccgcacccggctaattttttgtattttttagtagagatggggtttcaccatgttagccaggatggtctccatctcttgacctcgtgatccgcccgccttggtctcccaaagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47832856 135 + 51301725 gctgggactacaggcgcccg--------------------ccaccgcacccggctaattttttgtattttttagtagagatggggtttcaccatgttagccaggatggtctcgatctcttgacctcgtgatccgcccgccttcgtctcccaaagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47545233 124 + 50890351 gctgggactacaggcgccca--------------------ccaccgcacccggctaattttctgtattttttagtagagacggggtttcactgtgttagccagcatggtctcgatctcttgaccttgtgatccgcccgccttc-----------t i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102623731 0 + 122678785 C e calJac3.chr22 45897157 0 + 49145316 C a score=386734.000000 s hg38.chr19_GL949747v2_alt 579407 139 + 729520 gctgggatt--acaggcatgagccaccgcacccggccTG--Tttttggtatttttaatagaaacagggtttcaccatgttggccaggttggtctcgaactcctgaactcagatgatccgcccacct----ctc------tgctgagattacag s panTro4.chr19 59854314 139 + 63644993 gctgggatt--acaggcatgagccaccgcacccggccTG--Tttttggtatttttaatagaaacagggtttcaccatgttggccaggttggtctcgaactcctgaactcagatgatccgcccacct----ctc------tgctgagattatag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765512 139 + 60714840 gctgggatt--acaggcatgagccaccgcgcccggccTG--Tttttggtatttttaatagagacacggtttcaccacgttggccaggttggtctcaaactcctgaactcagatgatccgcccacct----ctc------tgctgagattacag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103300601 139 - 106955855 gctgggatt--acaggcgtgagccaccgcgcccagccTG--Tttttggtatttttaatagagacagggtttcaccatgttggccaggttggtctcgaactcctgaactcagatgatctgcccacct----ctc------tgctgagattacag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60590871 151 + 64156825 gctgggctt--acagacgtgagccaccacacccaccctgttttttttgtatttttaatagagacggggtttcgccatgttggccagggtggtctcgaactcctgaactcagatgatccgcccacctcagcctcccaaagtggtgagattacag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55730215 151 + 59248254 gctgggatt--acaggcgtgagccaccacacccaccctgttttttttgtatttttaatagagacggggtttcgccatgttggccaggttggtctcgaactcctgaactcagatgatccgcccacctcagcctcccaaagtgctgagattacag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47832991 151 + 51301725 gctgggatt--acaggcgtgagccaccacacccaccctgttttttttgtatttttaatagagacagggtttcgccatgttggccaggttggtctcgaactcctgaactcagatgatccgcccacctcagcctcccaaagtgctgagattacag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47545357 150 + 50890351 gctgggatt--acaggcgtgagccaccgcacccaccctg-tttttttatatttttaatagagacagggtttcaccatgttggccaggttggtctcgaactcctgaactcagatgatccgcccacctcagcctcccaaagtgctgagattacag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45897157 150 + 49145316 gctgggatgcaccagacatgcacagccacagctg-tcag--tttttggtattcttagtggagacagggttttgccatgttggccaggttggtctcgaactcctgacctcagatgatctaccctcttcggcctcccaaagtgctgagattacag i calJac3.chr22 C 0 C 0 e canFam3.chr1 102623731 0 + 122678785 C a score=1190693.000000 s hg38.chr19_GL949747v2_alt 579546 372 + 729520 gcaggagccaccgtgccggg--ccTGAAG-------CAGGTGTTTATTTCAGCAAGAGGCGCCACGTGGGTGGCGCAGTAAGT-CAGGTGTTACC-----CTTTCTCTTCTATAGCCCCAGAACTA-AACCAGAGCTGCCCATGGGAAGAGGAG----ACTTACGACAACATCTGCAGGAAGTGTTTTGGGCGTGTCATGGTCTTGTACAGCAACATGGCACCCTCATCCAGGAGCACATTGGCTGAGAGACGCAGGTGCTTCAGGGACTGGTTGGCTTTGAGGACATAGAAGAATTCAGCCCACTGCTCCGGGGTGGCACAGTGACCTCCCAACCTGTGAAAAGAGTGGGAA-AAGTCATTCTTCTGGGAGGACAGAGTATACCCTATCAGC s panTro4.chr19 59854453 372 + 63644993 gcaggagccaccgtgccggg--ccTGAAG-------CAGGTGTTTATTTCAGCAAGAGGCACCACGTGGGTGGTGCAGTAAGT-CAGGTGTTACC-----CTTTCTCTTCTATAGCCCCAGAACTA-AACCAGAGCTGCCCATGGGAAGAGGAG----ACTTACGACAACATCTGCAGGAAGTGTTTTGGGCGTGTCATGGTCTTGTACAGCAACATGGCACCCTCATCCAGGAGCACATTGGCTGAGAGACGCAGGTGCTTCAGGGACTGGTTGGCTTTGAGGACATAGAAGAATTCAGCCCACTGCTCCGGGGTGGCACAGTGACCTCCCAACCTGTGAAAAGAGTGGGAA-AAGTCATTCTTCTGGGAGGACAGAGTATACCCTATCAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765651 372 + 60714840 acaggagccaccgcgcccgg--ccTGAAG-------CAGGTGTTTATTTCAGCGAGAGGCGCCACGTGGGTGGCGCAGTAAGT-CAGGTGTTACC-----CTTTCTCTTCTATGGCCCCAGAACTA-AACCAGAGCTGCCCGTGGGAAGAGGAG----ACTTACGACAACATCTGCAGGAAGTGTTCTGGGTGTGTCATGGTCTTGTACAGCAACTTGGCACCCTCGTCCAGGAGCACATTGGCTGAGATGTGCAGGTGCTTCAGGGACTGGTTGGCTTTGAGGACATAGAAGAATTCAGCCCACTGCTCCGGGGTGGCACAGTGACCTCCCAACCTGTGAAAAGAGTGGGAA-AAGTCATTCTTCTGGGAGGACAGAGTATACCCTATCAGC i ponAbe2.chr19 C 0 I 20 s nomLeu3.chr10 103300740 372 - 106955855 gcaggagccaccgcgcccag--ccTGAAG-------CAGATGTTTATTTCAGCGAGAGGCGCCACGAGGGTGACGCAGTAAGT-CAGGTGTTACC-----CTTTCTCTTCTATGGCCCCAGAACTA-AACCAGAACTGCCCGTGGGAAGAGGAA----ACTTACGACAACATCTGCAGGAAGTGTTCTGGGTGTGTCATGGTCTTGTACAGCAACTGGGCACCCTCGTCCAGGAGCACATTGGCTGAGAGATGCAGGTGCTTCAGGGACTCATTGGCTTTGAGGACATAGAAGAATTCAGCCCACTGCTCTGGGGTGGCACAGTGACCTCCCAACCTGTGAAAAGAGTGGGAA-AAGTCATTCTTCTGGGAGGACAGAGTACACCCTATCAGC i nomLeu3.chr10 C 0 I 12 s rheMac3.chr19 60591022 371 + 64156825 gca-gagccaccatgcccag--ccTGAAG-------CAGGTGTTTATGTCAGCGAGAGGTGCCACGTGGGTGGCCCAGCAAGT-CAGGTGTTACC-----CTGTCTCTTCTATGGCCCCAGAGCTA-AACCGGAGCTGGCCGTGGGAAGAGGAT----ACTTACGACAACATCTGTAGGAAGTGTTTTGGGTGTGTCATGGTCTTGTACAGCAACTTGGCACCCTCGTCCAGGAGCACACTGGCTGAGAGGTGCAGGTGCCTCAGGGACTGGTTGGCTTTGAGGACATAGAAGAAATCAACCCACTGCTCCGAGGTGGCACAGTGACCTCCCAACCTGTGAAAAGCGTGGGAA-AAGTCATTCTTCTGGGAGGACAGAGTATAACCTATCAtt i rheMac3.chr19 C 0 I 2 s macFas5.chr19 55730366 371 + 59248254 gca-gagccaccatgcccag--ccTGAAG-------CAGGTGTTTATGTCAGCGAGAGGTGCCACGTGGGTGGCCCAGCAAGT-CAGGTGTTACC-----CTTTCTCTTCTATGGCCCCAGAGCTA-AACCGGAGCTGCCCGTGGGAAGAGGAG----ACTTACGACAACATCTGTAGGAAGTGTTTTGGGTGTGTCATGGTCTTGTACAGCAACTTGGCACCCTCGTCCAGGAGCACACTGGCTGAGAGGTGCAGGTGCCTCAGGGACTGGTTGGCTTTGAGGACATAGAAGAAATCAACCCACTGCTCCGAGGTGGCACAGTGACCTCCCAACCTGTGAAAAGGGTGGGAA-AAGTCATTCTTCTGGGAGGACAGAGTATAACCTATCAGC i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47833142 371 + 51301725 gca-gagccaccatgcccag--cctgaag-------caGGTGTTTATGTCAGCGAGAGGTGCCACGTGGGTGACCCAGCAAGT-CAGGTGTTACC-----CTTTCTCTTCTATGGCCCCAGAGCTA-AACTGGAGCTGCCCGTGGGAAGAGGAG----ACTTACGACAACATCTGTAGGAAGTGTTTTGGGTGTGTCATGGTCTTGTACAGCAACTTGGCACCCTCGTCCAGGAGCACACTGGCTGAGAGGTGCAGGTGCCTCAGGGACTGGTTGGCTTTGAGGACATAGAAGAAATCAACCCACTGCTCCGAGGTGGCACAGTGACCTCCCAACCTGTGAAAAGCGTGGGAA-AAGTCATTCTTCTAGGAGGACAGAGTATAACctatcagc i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 47545507 371 + 50890351 gca-gagccaccatgcccag--ccTGAAG-------CAGGTGTTTATGTCAGCGAGAGGTGCCATGTGGGTGGCCCAGCAAGT-CAGGTGTTACC-----CTTTCTCTTCTATGGCCCCAGAGCTA-AACCGGAACTGCCCGTGGGAAGAGGAG----ACTTACGACAACATCTGTAGGAAGTGTTTTGGGTGTGTCATGGTCTTGTACAGCAACTTGGCACCCTCGTCCAGGAGCACACTGGCTGAGAGGTGCAGGTGCCTCAGGGACTGGTTGGCTTTGAGGACATAAGAGAAATCAGCCCACTGCTCCGAGGTGGCACAGTGACCTCCCAACCTGTGAAAAGCATAGGAA-AAGTCATTCTTCTGGGAGGACAGAGTATAACCTATCAgt i chlSab2.chr6 C 0 I 320 s calJac3.chr22 45897307 370 + 49145316 gcatgagtcaccatgcccag--ccTGAAG-------CGGGTGTTTCTATCAGGGAGAGGTACCACGTGGGCAGCCCAGCAAGT-CGGGTGTTACA-----GTTTCCCTTCTCTTTTACCTGACCCA-CACCAGAGCTCCCCATGGGAAGAG-------ACTCACGACAACTTCTGCAGCAAGTTCGTTGGGTGTCCTATGGTCTCATACAGCAACTTGGCACCCTCGTCCAGGAGCAGATTGGCTGAGAGGTGTAGGTGCCTCAGGGACTGGTTCGCTTTGAGAAGAAAGGAGAAATCCGCCCACTGCTCTGGGGTGGCCGAGTGGCCTCCAAACCTGTGGGAAGAGTGGGAGTCAGTCATTCGTTTGTGAGGACAGAGAGCACCAGATCAGC i calJac3.chr22 C 0 I 5 s canFam3.chr1 102623731 383 + 122678785 GCATGAGCCA-CATACCTGGGACCAGAAATGGGAACCAGGTGTCCACATCAGTAGGAGGTCCCATATGGGTAGTCCAGCAAATCCAGATTTTACCCACTGCTCTTCCCTATGTGGCCCCAAACATAGGAAAAGAGATGCTCCCAGGGAGAGAGGCAGTACTTACGACAGTCTCTGCAGGAAGCATTTTGGGTGTCTCAGAGTTGTGCACAGCAACTTGGCACTCTCATCTGGGAGCTCATTGGCTGTGAGGTTCAGGCATGTCAGGGACTGGTTGATTTTGAGGGAGGAGGAGAGATGGGCCCATTGCTGAGTGGTGGCAGAACAAGATACCAACCTGCCAGAAGAATGGGAACACATTATTTTTTTTAAAG---------TAtttttttaac i canFam3.chr1 C 0 C 0 a score=41193.000000 s hg38.chr19_GL949747v2_alt 579918 11 + 729520 ttttttttttt s panTro4.chr19 59854825 11 + 63644993 ttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56766043 11 + 60714840 ttttttttttt i ponAbe2.chr19 I 20 C 0 s nomLeu3.chr10 103301124 11 - 106955855 ttttttttttt i nomLeu3.chr10 I 12 C 0 s rheMac3.chr19 60591395 11 + 64156825 ttttttttttt i rheMac3.chr19 I 2 C 0 s macFas5.chr19 55730739 11 + 59248254 ttttttttttt i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47833515 11 + 51301725 ttttttttttt i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47546198 11 + 50890351 ttttttttttt i chlSab2.chr6 I 320 C 0 s calJac3.chr22 45897682 11 + 49145316 ttttttttttt i calJac3.chr22 I 5 C 0 s canFam3.chr1 102624114 11 + 122678785 ttttatttatt i canFam3.chr1 C 0 I 3380 a score=359343.000000 s hg38.chr19_GL949747v2_alt 579929 126 + 729520 ---------------gagacagagtttcactctgttgcccagtctggaatgcaaaggcgtgatctcacctcactgcagcctccgcctcccgggttcaagctattctcctgcctcagcctccgaagtagctgggattacagg s panTro4.chr19 59854836 126 + 63644993 ---------------gagacagagtttcactctgttgcccagtctggaatgcaaaggcgtgatctcacctcactgcagcctccgcctcccgggttcaagctattctcctgcctcagcctccgaagtagctgggattacagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56766054 126 + 60714840 ---------------gagacagagtttcactctgttacccagtctggaatgcaaaggcgtgatctcacctcactgcagcctccacctcccgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103301135 126 - 106955855 ---------------gagacagagtttcactctgttgcccagtctggagtgcaaaggtgtgatctcacctcactgcagcctccgcctcccgggttcaagccattcttctgcctcagcctcccaagtagctgggatgacagg i nomLeu3.chr10 C 0 M 100 s rheMac3.chr19 60591406 126 + 64156825 -------------gggggac--agtttcactctgtcacccaggctggagtgcaatggcgtgatctcacctcactgcagcctccacctcccgggttcaagcaattctcctgcctcagcctcccaagcagctgggattacagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55730750 139 + 59248254 tttttttttttgggggggac--agtttcactctgtcacccaggctggagtgcaatggcgtgatctcacctcactgcagcctccacctcccgggttcaagcaattctcctgcctcagcctcccaagcagctgggattacagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47833526 128 + 51301725 tttt-----------gggac--agtttcactctgtcacccaggctggagtgcaatggcgtgatctcacctcactgcagcctccacctcccgggttcaagcaattctcctgcctcagcctcccaagcagctgggattacagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47546209 124 + 50890351 ---------------gagac--agtttcactctgtcacccaggctggagtgcaatggcgtgatctcacctcactgcagcctccgcctcccgggttcaagcgattctcctgcctcagcctcccaagcagctgggattacagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45897693 141 + 49145316 ttttttttttttaaggagacagagtttcaccctgttgctggggctggagcccaatggcacaatctcggctcactgcagcctccgcctcccaggttcaagcaattctcctgcctcaacctctcaagtagctaggattacagg i calJac3.chr22 C 0 C 0 e canFam3.chr1 102624125 3380 + 122678785 I a score=171564.000000 s hg38.chr19_GL949747v2_alt 580055 85 + 729520 ----------cattc---gccaatttttgtatttttagtagagacgggatttcaccatgttggccacactggtcttgaactcctgacctcaggtgatc s panTro4.chr19 59854962 85 + 63644993 ----------cattc---gccaatttttgtatttttagtagagacaggatttcaccatgttggccacactggtcttgaactcctgacctcaggtgatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56766180 85 + 60714840 ----------catac---gccaatttttgtatttttagtggagatgggatttcaccatgttggccacactggtcttgaactcctgacctcaggtgatc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60591532 85 + 64156825 ----------cacac---gccaatttttgtatttttagtagagatgggatttcaccatgttgaccatgctggtcttgaactcctgacctcaggtaatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55730889 85 + 59248254 ----------cacac---gccaatttttgtatttttagtagagatgggatttcaccatgttgaccatgctggtcttggactcccgacctcaggtaatc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47833654 85 + 51301725 ----------cacac---gccaatttttgtatttttagtagagatgggatttcaccatgttgaccatgctggtcttgaactcccgacctcaggtaatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47546333 85 + 50890351 ----------cacac---gccaatttttatatttttagtagagatgggatttcaccatgttgaccatgctggtcttgaactcccgacctcaggtaatc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45897834 86 + 49145316 cacatggcaccatgcccggctaatttttgta-ttttattaaagaggg-----------gtttgccaggctggtctcaaactcctgacgtcaggtgatt i calJac3.chr22 C 0 C 0 e canFam3.chr1 102624125 3380 + 122678785 I e nomLeu3.chr10 103301261 100 - 106955855 M a score=614228.000000 s hg38.chr19_GL949747v2_alt 580140 214 + 729520 cacccaccttggcctaccgaagtactgggattacaggtgtgagccaccgcgcctggcc-CAGATCAGCTTCTTCTGCTTCACTTCCCAAGACATTATGTCTTTGGTTTATCTCATTCTA--CTCATGCCTCCAACCCTGGCCTGAATTACTGGAGAGATCTAATGTTGCCTCTGCTTCTTCAAGTATCCCCATGGCCATTAGGGTAACATCCAGCCA s panTro4.chr19 59855047 214 + 63644993 cacccaccttggcctcccgaagtgctgggattacaggcgtgagccaccgcgcctggcc-CAGATCAGCTTCTTCTGCTTCACTTCCCAAGACATTATGTCTTTGGTTTATCTCATTCTA--CTCATGCCTCCAACCCTGGCCTGAATTATTGGAGAGATCTAATGTTGCCTCTGCTTCTTCAAGTATCCCCATGGCCATTAGAGTAACATCCAGCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56766265 214 + 60714840 cacccacctcggcctcccaaagtgctgggattacaggcgtgagccactgcacctggcc-CAGATCAGCTTCTTCTGCTTCACTTCCCAAGACATTATGTCTTTCGTTTATCTCATTCTA--CTCATGTCTGCAACCCTGGCCTGAATTATTGGAGAGATCTAATGTTGCCTCTGCTTCTTCAAGTATCCCCATGGCCATTAGAATAACATCCAGCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103301361 214 - 106955855 cacccacctcggcctcacaaagtgcagggattacaggcgtgagccaccatgcctggcc-CAGATCAGCTTGTTATGCTTCACTTCCCAAGACAATATGTCTTTGGTTTATCTCATTCTA--CTCATGTCTCCAACCCTGGCGTGAATTATTGGAAAGATCTAATGTTGCCTCTGCTTCTTCAAGTATCCCCATAGCCACTAGAGTAACATCCAGCCC i nomLeu3.chr10 M 100 C 0 s rheMac3.chr19 60591617 213 + 64156825 cacccacctcggcctctcaaagtgctgggattacaggtgtgagccaccacgcccggcT-CAGATCAGCTTCTTCTGCTTCACTTCCCAAAACG-TACGTCTTTGGTTTATCTCATTCTA--CTCATGTCTCCAACCCTGGCCTGAATTATTGGAGAGATCTAATCTTTCCTCTGCTCTTTCAAGTATCCCCATGGCCATTAGAGTAACATCCAGCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55730974 213 + 59248254 cacccacctcggcctctcaaagtgctgggattacaggtgtgagccaccacgcccggcT-CAGATCAGCTTCTTCTGCTTCACTTCCCAAAACG-TACGTCTTTGGTTTATCTCATTCTA--CTCATGTCTCCAGCCCTGGCCTGAATTATTGGAGAGATCTAATCTTTCCTCTGCTCTTTCAAGTATCCCCATGGCCATTAGAGTAACATCCAGCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47833739 211 + 51301725 cacccacctcggcctctcaaagtgctgggattacaggtgtgagccaccacacctggct-cacatTAG---CTTCTGCTTCACTTCCCAAAACATTATGTCTTTGGTTTATCTCATTCTA--CTCATGTCTCCAACTCCGGCCTGAATTATTGGAGAGATCTAATCTTTCCTCTGCTCTTTCAAGTATCCCCATGGCCATTAGAGTAACATCCAGCCa i papAnu2.chr19 C 0 I 5286 s chlSab2.chr6 47546418 214 + 50890351 cacccacctcagcctcccaaagtgctgggattacaggtgtgagccaccacgcctggcT-CAGATCAGCTTCTTCTGCTTCACTTCCCAAAACGTTACGTCTTTGGTTTATCTCATTCTA--CTCATGTCTCCAACCCTGGCCTGAATTATTGGAGAGATCTAATCTTTCCTCTGCTCCTTCAAGTATCCCCATGGCCATTAGAGTAACATCCAGCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45897920 216 + 49145316 cgcccacctcggcctcccaaa-tgctgggattaaaggtgtgagccaccacacccggccTCTTATCAGCTTCTTATGCTTCACTTCCCAAAACACTGTGTCTTTGGTTTATCTCATTTTACTCTCCTTTCTCCAACCCTGGCCTGAATTATTGGAGAAATCTAATCTTTCCTCTGCTTCTTCAAGTTTCCTCATGGCCACTGGAGCTACGTCCAGCCT i calJac3.chr22 C 0 C 0 e canFam3.chr1 102624125 3380 + 122678785 I a score=1159471.000000 s hg38.chr19_GL949747v2_alt 580354 533 + 729520 CTTCTCCAAGAGATTGTAATACAATTCTGTGCAATGTTTCACCAAAACGGCCTGTGTGGATGATTTTGCAGGGGGGAAAAAAAAAttttttttttgagacaggatctcgctctgttgcccaggctggagtgcagtggcatgatcacaggtcaccacaac--ctgtctcctgggctcaaatgatcctccc-acctcagcatccactgtagctgggactaGAAGGGGCAA----ATTGATGCTTAATACTCAAAATAAAAATTTTATCCTggccaggcgcagtggttcatgcctgtaatcctagcactttggga---ggccgagacaggcggatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccct-gtctctattaaaaatacaaacatttgccaggcgtggtggtgcacgcctgtaaccccagctactcgggaagctgaggcag---aactgcttg-aacccaggaggcggaggttgcagtgaa-cgagatcgcgccactgcgctccagcctgggtgacaagaataaaact s panTro4.chr19 59855261 540 + 63644993 CATCTCCAAGAGATTGTAATACAATTCTGTGCAATGTTTCACCAAAACGGCCTGTGTGGATGATTTTGTAGGCGG-AAAAAAAAAtttttttttttagacaggatctcgctctgttgcccaggctggagtgcagtggcatgatcacaggccaccacaac--ctgtctcctgggctcaaatgatcctccc-acctcagcatccactgtagctgggactaGAAGGGGCAAGCAAATTGATGCTTAATACTCAAAATAAAAATTTTATCCTggccaggtgcagtggttcatgcctgtaatcctagcactttggga---ggccgaggcaggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaacccccgtctctattaaaaatacaaacatttgccaggcgtggtggtgtatgcctgtaaccccagctactcgggaagctgaggcaggagaactgcttg-aacccaggaggcagaggttgcagtgaa-cgagatcgcaccactgcactccagcctgggtgacaagaataaaact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56766479 533 + 60714840 CATCTCCAAGAGATTGTAATACAATTCTGTGCAATGTTTCACCAAAATGGCCTGTGTGGAGGATTTTGTAGGGGG---AAAAAAAttttttttttgaaacagcatatcgctctgttgcccaggctagagtgcagtggcatgatcacaggtcaccacaac--ctgtctcctgggctcaaatgatcttccc-acctcagcctccagtgtagctgggactaGAAGGGGCAA----ATTGATGCTTAATACTCAAAATAAAATTTTTATCCTggccaggtgcagtggttcatgcctgtaatcctagcactttggga---ggccgaggcaggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaacccc-gtctctattaaaaatacaaacatttgccaagcgtggtggtacatgcctgtaaccccagctactcgggaagctgaggcaggagaactgcttg-aacccaggaggcagaggttgcagtgaa-tgagatcgcactactgcactccagcctgggcaacaagagtaaaact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103301575 530 - 106955855 CATCTCCAAGAGATTGTAATACAATTCTGTGCAATGTTTCACCAAAACGGCCTGTGTGGATGATTTTGTAGGGGG---AAAAAAAttttttttttgagacaggatctcgctctgttgcccaggctggagtgcagtggcatgatcacaggtcaccacaac--ctgtctcctgggctcagatgatcctccc-acctcagcctccagtgtagctggaactaGAAAGGGCAA----ATTGATGCTTAATACTCAAAATAAAAATTTTATCCTggccaggtacagtggttcatgcctgtaatcctagcactttggga---ggccgaggcaggtggttcacttgagatcaggagttcgagaccagcctggccaacatggtgaaacccc-gtctctattaaaaatacaaacatttggcaggcgtggtggtgcgtgcctgtaacccgagctacttgggaggctgaggcaggagaactgcttg-aacccaggaggcagaggttgcagtgaa-tgagatcgcaccactgcactccagcctgg---acaagaggaaaact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60591830 540 + 64156825 CATCTCCAAGAGACTGTAATACAATTCTGTGCAATGTTTCACCAAAATGGCCTGTGTGGAAGATTTTGTAGGGAA---GAAAAAA-AttttttttgagacaggatctcgctctgttgcccaagctggagtgcagtggcatgatcacagctcaccacaacctctgtctcctgggctcaaatgatcctcccaacctcagcctctagtgtagctgggactaGAAGGGGCAA----ATTGATGCTTAATACTCAAAATAAAAATTTTATCCTggccaggtgcagtggctcatgcctgcaatcctagcactttgggatccggcccaggcaggtggatcacttgaggtcagaagttcaagaccagcctggccaacgtggtgaaacccc-gtctctactaaaaatacaaacatttgttgggcatggtggtacatgcctgtaatcccagctgcttgggaggctgaggcaggagaatcgcttgaaacccaggaggcataggttgctgtgagccgagatcgcaacactgcactccagccttggtgacaagagtaaaact i rheMac3.chr19 C 0 I 7 s macFas5.chr19 55731187 538 + 59248254 CATCTCCAAGAGACTGTAATACAATTCTGTGCAATGTTTCACCAAAATGGCCTGTGTGGATGATTTTGTAGGGAA---GAAAAAA-Attttttttgagacaggatctcgctctgttgcccaagctggagtgcagtggcatgatcacagctcaccacaac--ctgtctcctgggctcaaatgatcctcccaacctcagcctccagtgtagctgggactaGAAGGGGCAA----ATTGATGCTTAATACTCAAAATAAAAATTTTATCCTggccaggtgcagtggctcatgcctgcaatcctagcactttgggatccggccgaggcaggtggatcacttgaggtcagaagttcaagaccagcctggccaacgtggtgaaacccc-gtctctactaaaaatacaaacatttgttgggcatggtggtgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaaacccaggaggcataggttgctgtgagccgagatcgcaacactgcactccagccttggcgacaagagtaaaact i macFas5.chr19 C 0 I 112 s chlSab2.chr6 47546632 527 + 50890351 CATCTCCAAGAGACTGTAATACAATTCTGTGCAATGTTTCGCCAAAATGGCCTGTGTGGATGATTTTGTAGGGGG---GAAAACAttttttttttgagacaggatttcgctctgttgcccaagctggagtgcagtggcatgatcacagctcaccacaacctctgtctcctgagctcaaatgatcctcac-acctcagcctccagtgtagctgggactaGAAGGGGCAA----ATTGATGCTTAATACTCAAAATAAAAATTTTATCCTggccaggtgcagtggtccatgcctacaatcctagcactttggga---ggccgaggcaggtggatcacttgaggtcagaagttcaagaccagcctggccagcgtggtgaaacccc-gtctctactaaaaatacaaacatttgccgggcatagtggtgcatgcctgtaatcccagctactcgagaggctgaggcaggagaatcgcttg-aacccaggaggcataggttgctgtgagccgagatcgcaacactgcactccag---------caagagtaaaact i chlSab2.chr6 C 0 I 7 s calJac3.chr22 45898136 530 + 49145316 CGTCTCCAAGAGACTGTAATAGAATTCTGTGTAACGTTTCACCAACAGGGCCTGTGGGGATGA-TTTGTAGGGGA---AAA-----Gttgtttttgagacaggaactcgctctgttgcccaggctggagtgcagtggcgtgatcatggctcagcaccacctctgtctccagggctcaagcaatcctcct-acctgggactccagcatagctgggactagaagggggaa----attgatgcttaatactcaaaataataagtttatcctggccaggcaggatggcttttgcctataatcccagcacttgggga---ggcagaggcaagttgatcacttgaggccaggagttcgagacaagcctggccagcatggtgaaccccc-atctctactaaaaatacaaaaattagctgggtgtggtggtgtgtgcctgtaatcccaggtacttgggaggctgagacaggagaatcacttg-aacccgggaggcagaggttgcagtgagctgagatcatgccattgcactccagcctgggtgacaagaataaaact i calJac3.chr22 C 0 C 0 e canFam3.chr1 102624125 3380 + 122678785 I e papAnu2.chr19 47833950 5286 + 51301725 I a score=28256.000000 s hg38.chr19_GL949747v2_alt 580887 25 + 729520 gtctcaaagaaaaaaaaaaaaaaaa s panTro4.chr19 59855801 24 + 63644993 gtctcaaagaaaaaaaaaaaaaaa- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767012 22 + 60714840 gtctcaaagaaaaaaaaaaaaa--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103302105 22 - 106955855 gtctcaaagaaaaaaaaaaaaa--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60592377 22 + 64156825 ccctcaaaaaaaaaaaaaaaac--- i rheMac3.chr19 I 7 C 0 s chlSab2.chr6 47547166 25 + 50890351 ctctcaaaaaaaagaaaaaaaaaaa i chlSab2.chr6 I 7 I 1 s calJac3.chr22 45898666 23 + 49145316 --gtcaaaaaaaaaaaaaaaaaaaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 102624125 3380 + 122678785 I e papAnu2.chr19 47833950 5286 + 51301725 I e macFas5.chr19 55731725 112 + 59248254 I a score=1074725.000000 s hg38.chr19_GL949747v2_alt 580912 533 + 729520 aagaTTCTCAT-TGAGTGCAGAGAaggttgcatgctccttatgaatacctaactcctgatgatctgagattgatgatccattctcctcagGCTCCCAAAGTGCGAGGATCAT-GCACTCCATA-GGATCAGGCACCAACGATTAGCTCCTGTGCC---tgatctgagatcgaacagtttcatcccaaaactacccccaaaccc--gtctgtggaaaaaactgtcttgtgcaaaaccggcccgcggtgcagaaaaggctgggggccactgCTCTCAATCCCAACAATTAGGCAAGGTGCAGTCAGGAATAGCATGTCCCTAAAGCTGGAACCCAGCACAGAATTCGGGGTGTTTCTTTGCATGGATAGCTGGTTATGCAACACAGAAGACAAGCTGGTGGGGGAAAGAGGAGAGGCCGACTCCCCCACACAGGCCTGTTTGAGGAATACATTCCCTGTCTGGGACGGCATCTGGAGTGGTTACCCTTTTTCCTAGATCCCCCAGCAACACGGTGCAGTGGACTCCAGGTGCTGGGGAGAGCC s panTro4.chr19 59855825 529 + 63644993 --gaTTCTCAT-TGAATGCAGAGGaggttgcaggctccttatgaatacctaactcctgatcatctgagattgatgatccattctcctcaggctcccaaagtgcggggatcaT-GCACTCCATA-GGATCAGGCACCAATGATTAGCTCCTGTGCC---tgatctgagattgaacagtttcatcccaaaactacccccaaaccc--gtctgtggaaaaa-ctgtcttgcgcaaaaccggcccgcggtgcagaaaaggctgggggccactgCTCTCAATCCCAACAATTAGGCAAGGTGCAGTCAGGAACAACATGTCCCTAAAGCTGGAACCCAGCACAGAATTCGGGGTGTTTCTTTCCATCGATAGCTGGTTATGCAACACAGAAGACAAGCTGGCGGGGGAAAGAGGAGAGGCCGACTCCCC-ACACAGGCCTGTTTGAGGAATACATTCCCTGTCTGGGACGGCATCTGGAGTGGTTACCCTTTTTCCTAGATCCCCCGGCAACGCGGTGCAGTGGACTCCGGGTGCTGGGGAGAGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767034 531 + 60714840 --GATTCTCA--TGAGTGCAGAGAaggttgcatgctctttatgagtacctaactcctgatgatctgagattgatgatccatttacctctggctcccaaagtgctgggatcatagCACTGCATA-AGATCAAGCACCAACGATTAGCTCCTGTGCC---tgatctgagattgaacggtttcatcccaaaactacccccaaacccctgtctgtggaaaaa-ctgtcttgcacaaaaccgacccctggtgcagaaaaggctgggggccactgCTCTCAAACCCAACAGTTTGGCAAGGAGCAGTCAGGAATAGCACATCCCTAAAGTTGGAACCCAGCACAGAATTCCGGGTGTTTCTTTGCATCAGTAGCTGGTTATGCAACACAGAAGTCAAGCTGGCAGGGGAAAGAGGAGAGGCTGACTCCCC-ACACAGGCCTGTTTGAGGAATACATTGCCTGTCTGGGACGGCATCTGGAGTGGTTACCCTTTTTCCTAGATCCGCCGGCAACACGGTGCAGTGGACTCCAGGTACTGGGGAGAGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103302127 531 - 106955855 --GATTCTCA--TGAGTGCAGAGAaggttgcatgctccttctgagtaccgaactcctgatgatctgagattgatgatccattcacctcaggctcccaaagtgctgggatcatagCACTGCATA-GGATCAAGCACCAACGATTAGCTCCTGTGCC---tgatctgagattgaacagtttcatcccaaaactacccgcaaacccctgtctgtggaaaaa-ctgtcttgcacaaaaccgggccccggtgcagaaaaggctgggggccactgCTCTCAATCCCAACAGTTAGGCAAGGTGCAGTCAGGAATAGCACGTCCCTAAAGCTGGAACCCAGCACAGAATTCGGGGTGTTTCTTTGCATTGATAGCTGGTTATGCAACACAGAAGTCAAGCTGGCGGGGGAAAGAGGAGAGGCTGACTCCAG-ACACAGGCCTGTTTGAGGAATACACTCCCTGTCTGGGATGGTATCTGGAGTGTTTATCCTTTTTCCTAGATCCCCCTGCAACACGGTGCAGTGGACTCCGGGTACTAGGGAGAGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60592399 536 + 64156825 aaGATTCTCATAGAAGTACAGAGAaggttgcatgctcc--atgagtacctaactcctgatgatctgagattgaTgatccattcacctcagactcccaaagtgctgggatcatagCACTGCATAGGGCTCAGGCACCAACAATCAGCTTCagtgcccgatgatctgagattgaacagtttcatcccaaaacta-ccccgaacctctttctatggaataa-ttctcttgcacaaaatcggcccccattgcagaaaaggctgggggccgctgCTCTCCATCCCAACATGTAGGCAAGCTGCAGTCAGGAATAGCACGTCCCTAGAGCCGGAACACAGCACAGAATTCGGGGGGTTTCTTTGCATCGAGAGCTGGTTATGCGACGCAGAAGCCAAGCTGGCGGGGGAAAGAGGAGAGGCTGACTCCCC-ACACAGGCCTGTTTGAGGAATACATTCCCCGTCTGGGACGGCATCCAAAGTGGTTACCCTTTTCCCTAGATCCCCCGGCAACGTGGTGCAGCGGACTCTGGGTACTGGGGAGAGCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55731837 538 + 59248254 AAGATTCTCATAGAAGTGCAGAGAaggttgcatgctccatatgagtacctaactcctgatgatctgagattgatgagccattcacctcagactcccaaagtgctgggatcatagCACTGCATAGGGATCAGGCACCAACAATTAGCTTCagtgcccgatgatctgagattgaacagtttcatcccaaaacta-ccccgaacctctgtctatggaataa-ttctcttgcacaaaatcggcccccattgcagaaaaggctgggggccgctgCTCTCCATCCCAACATGTAGGCAAGCTGCAGTCAGGAATAGCACGTCCCTAGAGCCGGAACACAGCACAGAATTCGGGGGGTTTCTTTGCATCGAGAGCTGGTTATGCGACGCAGAAGCCAAGCTGGCGGGGGAAAGAGGAGAGGCTGACTCCCC-ACACAGGCCTGTTTGAGGAATACATTCCCCGTCTGGGACGGCATCCAAAGTGGTTACCCTTTTCCCTAGATCCCCCGGCAACGCGGCGCAGCGGACTCTGGGTACTGGAGAGAGCG i macFas5.chr19 I 112 C 0 s chlSab2.chr6 47547192 539 + 50890351 aaGATTCTCATAGGAGTGCAGAGAaggttgcacgctccatgtgagtacctaactcctgatgatctgagattgatgatccgtttacctcagactcccaaagtgctgggatcatagCACTGCATAGGGATCAGGCAGCAACAATTAGCTTCagtgcccgatgatctgagattgaacagtttcatcccaaaactacccccgaacctctgtctatggaataa-ttctcttgcacaaaatcggcccccattgcagaaaaggctggggaccgctgCTCTCCATCCCAACATGTAGGCAAGCTGCAGTCAGGAATAGCACGTCCCTAAAGCCGGAACACAGTACAGAATTCGGGGTGTTTCTTTGCATCGAGAGCTGGTTATGCGACCCAGAAGTCAAGCTGGCGGGGGAAAGAGGAGAGGCTGACTCCCC-ACACAGGCCTGTTTGAGGAATACATTCCCTGTCTGGGACAGCATCCAAAGTGGTTACCCTTTTCCCTAGATCCCCTGGCAACGTGGTGCAGCGGACTCTGGGTACTGGGGAGAGCG i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45898689 479 + 49145316 aggaatctcataggactat-gagaaggttgcatgctccctgtgagtccctaactcctaatgatctg-gactgatgatctatccgcctcaggctcccaaagtactgggatcacCTCACTGCACGGGGATCAGGCACCA-------------GAgcctgatgatctgagattgaacagtttcatcccaaaacttcccccaaacccctgtctgtggaaaac-ctgtcttgcacaaaaccggtccccagtgcagaaaaagctggcggccgctgCTCTCAATCCCAGCAGGTAGGCGAGAGGCAGTCAGGGGTAGCCCGTTTCTAAAGCTGGAACACAGCACAGAGTTCTGGGTGTTTCTTTGCATGGAGAGCTGGTCATGTCACACCGAAGTCAAGCTGGTGGGGG---GAAGAGAGGCTGACACCCC-ACACAGGCCTGTTTGAGGGATATGTTTCCTGCCTG------------------------------------------GCAACGCGGTGTAGAGGACTCCGGGTCCTCGGGAGAGCC i calJac3.chr22 C 0 C 0 e canFam3.chr1 102624125 3380 + 122678785 I e papAnu2.chr19 47833950 5286 + 51301725 I a score=234680.000000 s hg38.chr19_GL949747v2_alt 581445 94 + 729520 GTGACCGTGAGACCCACCTCAGGTACTGCAGGTTGCATTTATGATTTCTGAGCAGGTCACACAGCATCAGCATCATCGTGCGTTCCCACTCGAT s panTro4.chr19 59856354 94 + 63644993 GTGACCGTGAGACCCACCTCAGGTACTGCAGGTTGCATTTATGATTTCTGAGCAGGTCACACAGCATCAGCATCATCGTGCGTTCCCACTCGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767565 94 + 60714840 GTGACCGTGAGACCCACCTCAGGTACTGCAGGTTGCATTTATGATTTCTGAGCAGATCACACAGCATCAGCATCATTGTGCGTTCCCACTCGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103302658 94 - 106955855 GTGACCGTGAGACCCACCTCAGGTACTGCAGTTTGCATTTATGATTTCTGAGCAGATCACACAGCATCAGCATCATCGTGCGTTCCCACTCGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60592935 94 + 64156825 GAGACCGTGAGACCCACCTCAGGTACTGCAGGTTGCATTTGTGATTTCTGAGCAGATCACACAGCAGCAGCAGCATCGTGCGTTCCCACTCGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55732375 94 + 59248254 GAGACCGTGAGACCCACCTCAGGTACTGCAGGTTGCATTTGTGATTTCTGAGCAGATCACACAGCAGCAGCAGCATCGTGCGTTCCCACTCGAT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47547731 94 + 50890351 GAGACCGTGAGACCCACCTCAGGTACTGCAGGTTGCATTTGTGATTTCTGACCAGATCACACAGCAGCAGCAGCATCGTGCGTTCCCACTCGAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45899168 94 + 49145316 AAGACCGTGAGACGCACCTCAGGTACTGGAGGTTGCCTCTGGGAGTCCTGAACAGGTCACACATCAGCAGCAGCATCGTGCGTTCCCACTCGAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102627505 88 + 122678785 GTGATGGTGAGATATACCTGAGGTATTGCAGATTACATTTTGGGTGTCTCAAGATTTCACACAAAATGGGAAGCATATCA---TTCTGGTC--- i canFam3.chr1 I 3380 C 0 e papAnu2.chr19 47833950 5286 + 51301725 I a score=351939.000000 s hg38.chr19_GL949747v2_alt 581539 114 + 729520 GTGCCCTGCCAGGGTCAGGTGCGTGAGGGTCTTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTACGCGGTGTCAGGGGTGACGTTTTTAATCCTAGGGAAAAGCAGAAGAGA s panTro4.chr19 59856448 114 + 63644993 GTGCCCCGCCAGGGTCAGGTGCGTGAGGGTCTTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTACGCGGTGTCAGGGGTGACGTTTTTAATCCTAGGGAAAAGCAGAAGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767659 114 + 60714840 GTGCCCTTCCAGGGTCAGGTGCGTGAGGGTCTTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTACGCAGTGTCAGGGGTGACGTTTTTAATCCTAGGGAAAAGCAGAAGAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103302752 114 - 106955855 GTGCCCTTCCAGAGTCAGGTGCGTGAGGGTCTTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTACGCAGTGTCAGGGGTGACGTTTTTAATCCTAGGGAAAAGCAGAAGAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60593029 114 + 64156825 GTGCCCTTCCAGGGTCAGGTGCGTGAGGGTCCTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTAAGCAGTGTCAGGGGTGACGTTTTTAATCCTAGGGAAAAGCAGGAGAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55732469 114 + 59248254 GTGCCCTTCCAGGGTCAGGTGCGTGAGGGTCCTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTAAGCAGTGTCAGGGGTGACGTTTTTAATCCTAGGGAAAAGCAGGAGAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3416370 112 - 51301725 GTG-CCTTGCAGGGTCAGATGCGTTACAGTCTTGTGACCTCGAAGAGCTAGGCAGAGGTTCCGATGAGCATCAGCTGGGAAAACGTTTTTGAACCTAgggaaaa-caaaagtga i papAnu2.chr19 T 54731 I 1199 s chlSab2.chr6 47547825 114 + 50890351 GTGCCCTTCCAGGGTCAGGTGCGTGAGGGTCTTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTAAGCAGTGTCAGGGGTGACATTTTTAATCCTAGGGAAAAGCAGAAGAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45899262 114 + 49145316 ATGCCCTTCCAGGGTCAGGTGAGTGAGGGTCGGCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTAAGCACTGTCAGGGGTGACGTTTTTAATCCTAGGAAAAAGCAAGAGAGA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102627593 113 + 122678785 ATTTCCTTGGAGAGTCAGATGCGTGAGAGTCTCATGACCACCAAAAGCAATGCAGAAGTTTCTATAAGCGTCTGCTGGGAAAATATTTTTGAGGCTAGGGAAAGG-ATAAGAAA i canFam3.chr1 C 0 C 0 a score=157049.000000 s hg38.chr19_GL949747v2_alt 581653 75 + 729520 TTCCACTTGGAGTGATTAATACTCACATTGTGTGGAGGCATGTATAAACAAAAAGCTGTTTCACATTTAGAAATT s panTro4.chr19 59856562 75 + 63644993 TTCCACTTGGAGTGATTAATCCTCACATTGTGTGGAGGCATGTATAAACAAAAAGCTGTTTCACATTTAGAAATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767773 75 + 60714840 TTCCACTTGGAGTGATTAATCCTCACATTGCGTAGAGGCGTGTATAAACAAAAAGCTGTTTCCCATTTAGAAATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103302866 54 - 106955855 ---------------------CTCACATTGTGTAGCGGCATGTATAAACAAAAAGCTGTTTCACATTTAGAAATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60593143 75 + 64156825 TTCCACTTTGAGCGAGCAATCCTCACGTTGTGTAGAGACATGTATAAACGAAAAGCTGCTTCACATTTAGAAACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55732583 75 + 59248254 TTCCACTTTGAGCGAGCAATCCTCACATTGTGTAGAGACATGTATAAACGAAAAGCTGCTTCACATTTAGAAACT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47547939 75 + 50890351 TTCCACTTTGAGCGAACAATCCTCACATTGTGTAGAGACATGTATAAACAAAAAGCTGTTCCACATTTAGAAACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45899376 75 + 49145316 TTCCACTTGGAGTGTTTAATCCTCACATTGTGTAGAGGCATGTATAAACAAAAAGCTGTTTCAGATTTAGAAACT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102627706 59 + 122678785 -------------GGTGAAATCTTGCATT---TATATATACATGAGAACAAAGGGCTGCAACAGGTTTAAACACT i canFam3.chr1 C 0 I 1798 e papAnu2.chr19 3416482 1199 - 51301725 I a score=315927.000000 s hg38.chr19_GL949747v2_alt 581728 137 + 729520 ATTAGAAGTTCTTggccgggtgcagtggctcgtgtctgtaaccccagcactttgggaggctgaggcaggaggataacctgaggtcaggagtctgagaccaacctgggcaacatggtgaaactccatctctacaaaaa s panTro4.chr19 59856637 137 + 63644993 ATTAGAAGTTCTTggccgggtgcagtggctcgtgtctgtaaccccagcactttgggaggctgaggcaggaggataacctgaggtcaggagtctgagaccaatctgggcaacatggtgaaactccatctctacaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767848 137 + 60714840 ATTAGAAGTTCTTggccaggtgcagcggctcacgtctgtaaccccagcactttgggagactgaggcaggaggataacctaaggtcagaagtctgagaccaacctgggcaacatggtgaaaccccatctctacaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103302920 137 - 106955855 ATTAGAAGTTCTTggccgggtgcagcggctcatggctgtaaccccagcactttgggaggctgaggcaggaggataacctgaggtcaggagtctgagaccaacctgggcaacattgtgaaaccccatctctacaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60593218 137 + 64156825 ATTAGAAGTTCTTggccaggcacggcggctcgtgtctgtaatcccagcactttgggaggccgaggcaggaggatcacccgaggtcaggagttcgagaccagcctgggcaacatgttgaaaccccatctctacaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55732658 137 + 59248254 Attagaagttcttggccaggcacggcggttcgtgtctgtaatcccagcactttgggaggccgaggcaggaggatcacccgaggtcaggagttcgagaccagcctgggcaacatgttgaaaccccatctctacaaaaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47548014 137 + 50890351 ATTAGAAGTTCTTggccaggcacggcggctcgtgtctgtaatcccagcactttgggaggccgaggcaggaggatcacccgaggtcaggagttcgagaccagcctgggcaacatggtgaaaccccatctctacaaaaa i chlSab2.chr6 C 0 I 1094 s calJac3.chr22 45899451 135 + 49145316 ATTAGAAGTTCCTggccaggcgcggtggctcacgtctgtaat--tggctctttgggaggccgaggcaggaggataacccgaggtcaaaagttcgagaccagcctgggcaacatggtgaaagcccatctctacaaaaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e papAnu2.chr19 3416482 1199 - 51301725 I a score=254.000000 s hg38.chr19_GL949747v2_alt 581865 3 + 729520 at----a s panTro4.chr19 59856774 3 + 63644993 at----a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767985 7 + 60714840 atacaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103303057 7 - 106955855 atacaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60593355 3 + 64156825 at----a i rheMac3.chr19 C 0 I 870 s macFas5.chr19 55732795 3 + 59248254 at----a i macFas5.chr19 C 0 I 4 s calJac3.chr22 45899586 1 + 49145316 ------a i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I a score=65174.000000 s hg38.chr19_GL949747v2_alt 581868 106 + 729520 aat---------------tagct-------------------------ggggccgaggcaggcagatcgcctgaggtcaggagttcgagaccagcctggccaacatggggaagccccgtctctactaaaaatacaaaaatta--gctg s panTro4.chr19 59856777 106 + 63644993 aat---------------tagct-------------------------ggggccgaggcaggcagatcgcctgaggtcaggagttcgagaccagcctggccaacatggcgaagccccgtctctactaaaaatacaaaaatta--gctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767992 106 + 60714840 aat---------------tagct-------------------------ggggccgaggcaggcggaccgcctgaggtcaggagttcgagaccagcctggccaacatggcaaagccccgtctctactaaaaatacaaaaatta--gctg i ponAbe2.chr19 C 0 I 442 s nomLeu3.chr10 103303064 106 - 106955855 aat---------------tagct-------------------------ggggccgaggcaggtggatcgcctgaggtcaggagctcgagaccagcctggccaacatggcgaagccctgtctctactaaaaatacaaaaatta--gctg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55732802 148 + 59248254 aatgaaggccaggtgcagtagctcacgtctataatcccagcactttgggagtccgaggcaagagaatcacttgaggtcaggagtttgagaccagtctgggcaacatggtgaaaccccaactccacaaaaaatacaaaaattaAggccg i macFas5.chr19 I 4 C 0 s calJac3.chr22 45899587 16 + 49145316 ----------------------------------------------------------------------------------------------------------------------------------atacaaaaatta--gctc i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=68481.000000 s hg38.chr19_GL949747v2_alt 581974 156 + 729520 cacatggaggggcatgcttgtagtcccaggtattcgggaggctgaggtaggagaatcacttgaatccaggaggcagaggttgcagtgagccgagaccgcaccactgcactccagcctgggcaacagagcaagactccatctc------aaaagaaaaaaaaa s panTro4.chr19 59856883 156 + 63644993 cacatggaggttcatgcttgtagtcccaggtatttgggaggctgaggtaggagaatcacttgaatccaggaggcagaggttgcagtgagccgagaccgcgccactgcactccagcctgggtaacagagcaagactccgtctc------aaaagaaaaaaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103303170 149 - 106955855 cacatggaggtgcacgcttgcagtcccaggtattcgggagcctgaggtaggagaatcacttgaatccaggaggcagagtttgcagtg----gagatca---------agaccatcctggctaacacggtgaaaccccatctctactaaaaatacagaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55732950 127 + 59248254 agcacagtggctcacgcctgtaatcccagcactttgggaggccgagacgggcggatcac---------gaggtcag---------------gagatcg---------agaccatcctggctaacacagtgaaaccccgtctctact--aaaaatacaaaaaa i macFas5.chr19 C 0 C 0 s calJac3.chr22 45899603 155 + 49145316 ggcatggtggtgggcacctgcaatcccagctacttgagagtttgaggcaggagaattgcttaaacccgggaggtagaggctgcagtgagccaagactgcaccactgcactccagcctgg-tgacagagcaagactccgtctc------agaagaaaataaaa i calJac3.chr22 C 0 I 164 e canFam3.chr1 102627765 1798 + 122678785 I e ponAbe2.chr19 56768098 442 + 60714840 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=7831.000000 s hg38.chr19_GL949747v2_alt 582130 18 + 729520 TTCgccgggtgtggtggc s panTro4.chr19 59857039 18 + 63644993 TTTgctgggtgtggtggc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103303319 18 - 106955855 ttagccgggtgtggtggc i nomLeu3.chr10 C 0 I 39 s macFas5.chr19 55733077 18 + 59248254 ttagctgggcgtggtaac i macFas5.chr19 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e ponAbe2.chr19 56768098 442 + 60714840 I e calJac3.chr22 45899758 164 + 49145316 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=41853.000000 s hg38.chr19_GL949747v2_alt 582148 269 + 729520 tcacgcctgtaatcccagcactttgggaggccgaggccgaggcgggtggatcacgaggtcaggagatcaaga-------------------------------ccatcctggctaacacggtgaaaccccgtctt-----------------tactaaaat----------------------------------------------------------------------------------------tacaaaaaactagccgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaacccgggaggcagggcttgcagtgagccgagattgctgcactgcactccagcctggggaacatagcgagactgtctc- s panTro4.chr19 59857057 269 + 63644993 tcatgcctgtaatcccagcactttgggaggccgaggccgaggcgggtggatcacgaggtcaggagatcaaga-------------------------------ccatcctggctaacacggtgaaaccccgtctc-----------------tactaaaat----------------------------------------------------------------------------------------tacaaaaaactagccgggcgtggtggcaggcgcctgtagtcccagctactagggaggctgaggcaggagaatggcgtgaacccgggaggcagggcttgcagtgagccgagattgcagcactgcactccagcctggggaacatagcgagactgtctc- i panTro4.chr19 C 0 C 0 s macFas5.chr19 55733095 402 + 59248254 gggcgcctgtagtcccagctactcgggaggctgaggc--aggagaatgg--catgaacctgggaggcggaggttccagcgagccgagattgcgccactgcactccagcctgggcgacaaagtgagactccatgtcaacaacaacaacaaaaatacaaaaaTTAGCgggggccaagacaggcaggtcacctgaggtcaggagttcgaggccagcctgaccaacatggtgaagccccgtctctactaaaaatacaaaaaattagccgggtattatggtgggtacttgtagtcccagctactcgggagactgaagcaggagaatggtgggaacccaggaggtggaggttgcagtgagccgagatcacgccactacactccagcctgggcgacacagcacgactccatct i macFas5.chr19 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e ponAbe2.chr19 56768098 442 + 60714840 I e calJac3.chr22 45899758 164 + 49145316 I e nomLeu3.chr10 103303337 39 - 106955855 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=1803.000000 s hg38.chr19_GL949747v2_alt 582417 9 + 729520 aaaaaaaaa s panTro4.chr19 59857326 9 + 63644993 aaaaaaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103303376 8 - 106955855 -aaaaaaga i nomLeu3.chr10 I 39 I 1 s macFas5.chr19 55733497 6 + 59248254 -aaagaa-- i macFas5.chr19 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e ponAbe2.chr19 56768098 442 + 60714840 I e calJac3.chr22 45899758 164 + 49145316 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=290064.000000 s hg38.chr19_GL949747v2_alt 582426 360 + 729520 aaaaaaa-GTCaagaagcagaggatcaggaaaaacaactaaggggtactaggcttaatacttgggtgacaaaataatctgtacaacaaactcctatgacacacggttacctgtgtaactaacctgtacttgtaccTACTTTTTGGTTTGTTTTGGTAACAAAACAAACCAAAAAAAA-------------GATAGCTGGggccaggcatggtggctcatgcctgtaatcccagcactttcgaagaccgaggcaggcgcatcaccttaggtcaggagttcgagacaagcctggccaagatggagaaaattccacctctactaaaaacacaagaTTAAgtcattgcactccagcgcctaggtgacagagtgaaact s panTro4.chr19 59857335 361 + 63644993 aaaaaaaaGTCaagaagcagaggatcaggaaaaacaactaaggggtactaggcttaatacttgggtgacaaaataatctgtacaacaaactcctatgacacacagttacctgtgtaactaacctgtacttgtaccTACTTTTTGGTTTGTTTTGGTAACAAAACAAACCAAAAAAAA-------------GATAGCTGGggccaggcatggtggctcatgcctgtaatcccagcactttcgaagaccgaggcaggcgcatcaccttaggtcaggagttcgagacaagcctagccaagatggagaaaattccacctctactaaaaacacaagaTTAAgtcattgcactccagcacctaggtgacagagtgaaact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56768540 361 + 60714840 AAAAAAA-TTCaagaagcagaggatcaggaaaaacaactaatgggtattaggcttaatacttgggtgacaaaataatctgtaaaacaaactcctatgacacatgtttacctgtgtaactaaccggtacttgtaccTACTTTTTGGTTTGTTTTGGTAACAAAACAAAACAAAAAAAA------------TGATAGCTGGggccaggcatggtggctcatgcctgtaatcccagcacttttgaagaccgaggcaggcgcatcaccttaggtcaggagttcgagaccagcctggccaagatggagaaaattccgcctctactaaaaacacaagattaagtcattgcactccagcgtctaggtgacagagtgaaact i ponAbe2.chr19 I 442 C 0 s nomLeu3.chr10 103303385 373 - 106955855 aaaaaaa-TTCaagaagcagaggatcaggaaaaacaactaatgggtactaggcctaatacttgggtgacaaaataatctgtacaacaaactcctatgccacacatttacctgtgtaactaacctatacttgtatcTACTTTTTGGTTTGTTTTGGTaacaaaacaaaccaaaaaaaaaaaaaaaaaaaaaGATAGCTGGggccaggcatggtggctcatgcctgtaatcccaacacttttgaagaccgaggcaggcgcatcaccttaggtcaggagttcaagaccagcctggccaagatggagaaaattctgcctctactaaaaatacaagattaagccATTGCACTCCAGCGCCTAGGTGACAGAGTGAAACT i nomLeu3.chr10 I 1 M 100 s macFas5.chr19 55733503 350 + 59248254 aaaaaCA-CTCaagaagcagaggatcaggataaacaactaatggatactaggctcaatacctgggtgataa---aatctgtacaacaaactcccatgacacacgtttacctgtgtaactaacctgcaattgtacctactTTTTGGTTTGCTTTGGTAACAAACCAA---AAAAAAAA-------------GATAGCT-Gggccaggcatggtggttcatgcctgtaatcccagcacttttgaaggccaaggcgggtgcatcaccttaggtcagaagtttgagaccagcctggccaacatggag-aaattccacctctactaaaaacacaagattgcaccactgcactccagcg--tgggtgacagagtgaaatt i macFas5.chr19 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e calJac3.chr22 45899758 164 + 49145316 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=5856.000000 s hg38.chr19_GL949747v2_alt 582786 11 + 729520 ctgtctcagaa s panTro4.chr19 59857696 11 + 63644993 ctgtctcaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56768901 11 + 60714840 ctgtctcaaaa i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55733853 11 + 59248254 ctgtctcaaaa i macFas5.chr19 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e calJac3.chr22 45899758 164 + 49145316 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=5487.000000 s hg38.chr19_GL949747v2_alt 582797 17 + 729520 aaaataaaaa-ataaaaA s panTro4.chr19 59857707 17 + 63644993 aaaataaaaa-ataaaaA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56768912 18 + 60714840 aaaaaaaaaaGGGGGGGG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55733864 17 + 59248254 aaaaaaaaaa-aaaaaaa i macFas5.chr19 C 0 I 27 s calJac3.chr22 3198172 17 - 49145316 AATATTAAAA-ATGTAAA i calJac3.chr22 n 164 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=-819.000000 s hg38.chr19_GL949747v2_alt 582814 2 + 729520 AG- s panTro4.chr19 59857724 2 + 63644993 AG- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56768930 2 + 60714840 AG- i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 3198189 3 - 49145316 ACT i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e macFas5.chr19 55733881 27 + 59248254 I e rheMac3.chr19 60593358 870 + 64156825 I a score=90560.000000 s hg38.chr19_GL949747v2_alt 582816 88 + 729520 Gggccaggtgcagcggctcatgcctataatcccagcactttggaaggccgaggcaggcaaatcacctgaggtcaggagctcgagatca s panTro4.chr19 59857726 88 + 63644993 Gggccaggtgcagcggctcacgcctataatcccagcactttggaaggccaaggcaggcaaatcacctgaggtcaggagctcgagatca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56768932 88 + 60714840 Gggccaggtgcagcggctcacgcctataatcccagcactttgggaggccgaggcaggcgaatcccctgaggtcaggagctcgagatca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3468668 86 - 59248254 Gggccgggtgcggtggctcacgcctgtaatcccagcactttgggaggccgagacaggcggaacac--gaggtcaggagatcgagatca i macFas5.chr19 T 51553 C 0 s papAnu2.chr19 3417681 72 - 51301725 gggccgggtgcggtggctcacgcctgtaatcccaacactttgggaggccgagacggacggatcac--gaggtca-------------- i papAnu2.chr19 I 1199 M 70 s calJac3.chr22 3198192 86 - 49145316 Tggccaggcgcggtggctcaagcctataatcccagcactttgggaggccgaggcgggtggatcac--gaggtcaagagatcgagacca i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e rheMac3.chr19 60593358 870 + 64156825 I a score=4645.000000 s hg38.chr19_GL949747v2_alt 582904 8 + 729520 gcctgggc s panTro4.chr19 59857814 8 + 63644993 gcctgggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769020 8 + 60714840 gcctgggc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3468754 8 - 59248254 tcctggct i macFas5.chr19 C 0 C 0 s calJac3.chr22 3198278 8 - 49145316 tcctggtc i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3417753 70 - 51301725 M e rheMac3.chr19 60593358 870 + 64156825 I a score=41419.000000 s hg38.chr19_GL949747v2_alt 582912 40 + 729520 aacacggtgaaaacctgtctgtgctaaaagtac--aaaatta s panTro4.chr19 59857822 40 + 63644993 aacacggtgaaaacctgtctctgctaaaagtac--aaaatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769028 40 + 60714840 aacacagtgaaaacctgtctctactaaaaatac--aaaatta i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3468762 42 - 59248254 aacacagtgaaaccccgtctctactaaaaacacaaaaaatta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3417824 42 - 51301725 aacacagtgaaaccccgtctttaataaaaacacaaaaaatta i papAnu2.chr19 M 70 I 1583 s calJac3.chr22 3198286 41 - 49145316 aacatggtgaaaccctgtctctactaaaaatac-aaaaatta i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e rheMac3.chr19 60593358 870 + 64156825 I a score=65453.000000 s hg38.chr19_GL949747v2_alt 582952 65 + 729520 gccgggcaaggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaattgctt s panTro4.chr19 59857862 65 + 63644993 gccgggcaaggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaattgctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769068 65 + 60714840 gcctggcaaggtggcacatgcctgtaatcccagctactcaggaggctgaggcagaagaattgctt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3468804 65 - 59248254 gctgggcatggtggtgggcgcctgtagtcccagctacttgggaggctgaaccaggagaatggcat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47839236 65 + 51301725 gccaggcatggtggttcatgcctgtaatcccagcacttttgaaggccaaggcgggtgcatcacct i papAnu2.chr19 I 5286 I 61 s calJac3.chr22 3198327 65 - 49145316 gctgggcacggtggtgcgtgcctgtagtcccagctcctcaggaggctgaggcaggagaattgctt i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e rheMac3.chr19 60593358 870 + 64156825 I a score=18681.000000 s hg38.chr19_GL949747v2_alt 583017 29 + 729520 gaacctgggaggtggaggatgc-agtgagc s panTro4.chr19 59857927 29 + 63644993 gaacctgggaggtggaggatgc-agcgagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769133 29 + 60714840 caacctgggaggcggaggatgc-ggtgagc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3468869 30 - 59248254 gaacccgggaggtggaacttgcaagtgagc i macFas5.chr19 C 0 C 0 s calJac3.chr22 3198392 29 - 49145316 gaccccaggaggcggaggttgc-ggtgagc i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 47839301 61 + 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=51543.000000 s hg38.chr19_GL949747v2_alt 583046 54 + 729520 tgagatcgcgccattgcactccagcc--------tgggcaacaagagtaaatctccgtctca s panTro4.chr19 59857956 54 + 63644993 tgagatcgcgccattgcactccagcc--------tgggcaacaagagtaaatctccgtctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769162 54 + 60714840 tgagatcgcgccattgcactccagcc--------tgggcaacaagagtaaatctccgtctca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3468899 60 - 59248254 cgagattgtgccactgcactccagcactccagcctgggcgtca--agtgagactccatctca i macFas5.chr19 C 0 I 67842 s papAnu2.chr19 47839362 53 + 51301725 caagattgcaccactgcactccagcg--------tgggtgaca-gagtgaaattctgtctca i papAnu2.chr19 I 61 I 2 s calJac3.chr22 3198421 54 - 49145316 cgagatcgagccattgcactccagcc--------tgggtaacaagggtgaaactctgtctca i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e rheMac3.chr19 60593358 870 + 64156825 I a score=600.000000 s hg38.chr19_GL949747v2_alt 583100 2 + 729520 cc s panTro4.chr19 59858010 2 + 63644993 cc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769216 2 + 60714840 cc i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e calJac3.chr22 3198475 0 - 49145316 C e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 47839415 2 + 51301725 I e macFas5.chr19 3468959 67842 - 59248254 I e rheMac3.chr19 60593358 870 + 64156825 I a score=32876.000000 s hg38.chr19_GL949747v2_alt 583102 18 + 729520 aaaaaaaaaaaaaaaaaa s panTro4.chr19 59858012 18 + 63644993 aaaaaaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769218 18 + 60714840 aaaaaaaaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103303861 18 - 106955855 AAAaaaaaaaaaaaaaaa i nomLeu3.chr10 M 100 C 0 s rheMac3.chr19 60594228 18 + 64156825 aaagaaaagaaaagaaga i rheMac3.chr19 I 870 C 0 s papAnu2.chr19 47839417 18 + 51301725 aaaaaaagaaagaaaaga i papAnu2.chr19 I 2 I 8 s chlSab2.chr6 47549245 18 + 50890351 aaaagaaagaaaagaaga i chlSab2.chr6 I 1094 C 0 s calJac3.chr22 3198475 14 - 49145316 ----aaaaaaaaaaaagt i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e macFas5.chr19 3468959 67842 - 59248254 I a score=7212.000000 s hg38.chr19_GL949747v2_alt 583120 3 + 729520 aaa s panTro4.chr19 59858030 3 + 63644993 aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769236 3 + 60714840 gac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103303879 3 - 106955855 aaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594246 3 + 64156825 aaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55733908 3 + 59248254 aaa i macFas5.chr19 I 27 C 0 s papAnu2.chr19 47839443 3 + 51301725 aaa i papAnu2.chr19 I 8 C 0 s chlSab2.chr6 47549263 3 + 50890351 aaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3198489 3 - 49145316 aaa i calJac3.chr22 C 0 I 39388 e canFam3.chr1 102627765 1798 + 122678785 I a score=11547.000000 s hg38.chr19_GL949747v2_alt 583123 8 + 729520 --gaCagctg s panTro4.chr19 59858033 10 + 63644993 aagaCagctg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103303882 8 - 106955855 --gacagctg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594249 8 + 64156825 --catagctg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55733911 8 + 59248254 --catagctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47839446 8 + 51301725 --catagctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549266 8 + 50890351 --gatagctg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e ponAbe2.chr19 56769239 0 + 60714840 C e calJac3.chr22 3198492 39388 - 49145316 I a score=100053.000000 s hg38.chr19_GL949747v2_alt 583131 53 + 729520 gaaaatccccaaatacatggagatgaaacagcacatttccaaatt---------taaaaaac s panTro4.chr19 59858043 53 + 63644993 gaaaatccccaaatacatggagatgaaacagcacatttccaaatt---------taaaaaac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103303890 53 - 106955855 gaaaatccccaaatacatggagatgaaacagcacatttccaaatT---------TAAAAAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594257 56 + 64156825 gaaaatccccaaatccatggagatgaaacaacacatttctaaatT------AAAAAAAAAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55733919 55 + 59248254 gaaaatccccaaatccatggagatgaaacaacacatttctaaatT-------TAAAAAAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47839454 55 + 51301725 gaaaatccccaaatCCATGGAGATgaaacaacacatttctaaatt-------aaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549274 62 + 50890351 gaaaatccccaaatccatggagatgaaacaacacatttctaaatTTaaaaaaaaaaaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45899922 51 + 49145316 gaaaaCCCCCCAAAACATGGAGATGAAACAACACATTTCTATACT-----------TATTTT i calJac3.chr22 I 164 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e ponAbe2.chr19 56769239 0 + 60714840 C a score=814675.000000 s hg38.chr19_GL949747v2_alt 583184 242 + 729520 aaaagtacaagaagCTTAGTCATCGTTCA-GGGTCTTCCTTGCA-AGATGAGCTTCTACTTACTCCACTTTCTGCAGATGACAGGTGCTACGGGTTACGTGGTCACAAAGAATCCGCACAGAAGAGTCACTCAGGAAGCTTTGTTTCACTTCCAGAAACTTGAGGTTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCTGTCCAGAGGCGAAGAGAGCGAAGATCCTGCCGAGCCCAGTTCGGAA s panTro4.chr19 59858096 242 + 63644993 aaaagtacaagaagCTTAGTCATGGTTCA-GGGTCTTCCTTGCA-AGATGAGATTCTGCTTACTCCACTTTCTGCAGATGACAGGTGCTACGGGTTACATGGTCACAAAGAATCCGCACAGAAGAGTCGCTCAGGAAGCTTTGTTTCACTTCCAGAAACTTCAGGTTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCGAAGAGAGCGAAGATCCTGCCGAGCCCAGGTCGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769239 234 + 60714840 ---------agaaGCTTAGTCATGGTTCAGGGGTCTTCCTTGCA-AGATGAGCTTCTGCTTACACCACTTTCTGCAGATGACAGGTGCTACGGGTTATGTGGTCACAAAGAATCCGCACAGAAGAGTCGCTCAGGAAGCTTTGTTTCACTTCCAGAAACTTCAGGTTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCAAAGAGAGCGAAGATCCTGCCGAGCCCAGTTCGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103303943 242 - 106955855 AAAAGTACAGGAAGCTTAGTCACGGTTCA-GGGTCTTCCTTGAA-AGATGGGCTTCTGCTTACTCCACTTTCTGCAGATGACAGGTGCTACGGGTTACGTGGTCACAAAGAATCCGCACAGAAAAGTCGCTCAGGAAGCTTTGTTTCACTTTCAGAAACTTCAGGTTGCTATTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCGAAGAGAGCGAAGATCCTGCCGCGCCCAGTTCGGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594313 242 + 64156825 AAAAGTGCAAGAAGCTGAGTCATGGTTCA-GGGTCTCCCCTGCA-AGATGAGTTTCTGCTTACTCCACTTTCTGCAGATGGCAGGTGCTACGGGTTATGTGGTCACAAAGAATCCGCACAGAAGAGTCGCTCAGGAAGCTTTGTTTCACTTCTAGAAACTTCAGATTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCGAAGAGAGCGAAGATCCTGCTGAGCCCAGCTGGGAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55733974 242 + 59248254 AAAAGTGCAAGAAGCTGAGTCATGGTTCA-GGGTCTCCCCTGCA-AGATGAGTTTCTGCTTACTCCACTTTCTGCAGATGACAGGTGCTACGGGTTATGTGGTCACAAAGAATCCGCACAGAAGAGTCGCTCAGGAAGCTTTGTTTCACTTCTAGAAACTTCAGATTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCGAAGAGAGCGAAGATCCTGCTGAGCCCAGCTGGGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47839509 242 + 51301725 aaaagtgcaagaagCTGAGTCATGGTTCA-GGGTCTCCCTTGCA-AGATGAGTTTCTGCTTACTCCACTTTCTGCAGATGACAGGTGCTACGGGTTATGTGGTCACAAAGAATCCGCACAGAAGAGTCGCTCAGGAAGCTTTGTTTCACTTCTAGAAACTTCAGATTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCGAAGAGAGCGAAGATCCTGCTGAGCCCAGCTGGGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549336 242 + 50890351 aaaaGTGCAAGAAGCTGAGTCATGGTTCA-GGGTCTCCCTTGCA-AGATGAGTTTCTGCTTACTCCACTTTCTGCAGATGACAGGTGCTACGGGTTATGTGGTCACAAAGAATCCGCACAGAAGAGTCACTCAGGAAGCTTTGTTTCACTTCTAGAAACTTCAGATTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCGAAGAGAGCGAAGATCCTGCTGAGCCCAGCTGGGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45899973 242 + 49145316 TAAAGTGCAAGGAGCTTAGTCATGGTTCA-GGATCTTCCCTGCA-AGAGGAGCTTCTCCTTACTCTGCTTTCTGCAGGTGACAGGTGTTACGGACTATGTGGTCACAAAGAACCCGCACGGACGACTCGCTCAGGAAGCTTTGTCTCACTTCCAGAAACTTCAGATTGCTGTTCAAGCTGACGAGAGAGCAGAAATCCTTCCAGACGTGAAGGGACTGAAGATCCTGCCGCGCCCAGTTTGGAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102629563 243 + 122678785 AAAAATGTAAGGAGCTTGGTTATGCCCTA-GGGGTTTTCATCCAGGGGTTAGCTTCTACTTACACCACTTTCTGAAGATTATGGGTAGCAGAGGTTATTTTTTCACAGAGAATTCTCACAGATGAGGCACTAAGGAAGCTCTGACTGATGTCTAGAAATATCAGGTTTTTATTTGAGTCAAACATGGAACAGAAGTCTATCCAGAAAGGAAGCACGTGTTGATCATTCTGGGACCTGTTGGGAA i canFam3.chr1 I 1798 I 1947 a score=208830.000000 s hg38.chr19_GL949747v2_alt 583426 90 + 729520 TGGTTAGGTAAGTGCACCTGCAGGAGAACACACGTTCATCTCTTAGGACTAGTACCTGCATGGTGAGATGGGCATCTGCAAACCACAttt s panTro4.chr19 59858338 90 + 63644993 TGGTTAGGTAAGTGCACCTGCAGGAGAACACACGTTCCTCTCTTAGGACTAGTACCTGCATGGCGAGATGGGCGTCTGcaaaccacattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769473 90 + 60714840 TGGTTAGGTAAGTGCACCTGCAGTAGAACACACGTTCATCTCTTATGACTAGTACCTGCATGGTGAGATGGGTGTCTGcaaaccacattt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304185 90 - 106955855 TGGTCAGGTAAGTGCACCTGCAAGAGAACACATGTTCATCTCTTATGACTAGTACCTGCATGGCGAGATGGGTGTCTGCAAACCACACtt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594555 90 + 64156825 GGGTTACGTAGGTGCACCTGCGGGAGAACACACGTTCGTCTCCTATGCCTAGTACCTGCGTCGGGGGACGGGGGTCTGcaaaccacattt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55734216 90 + 59248254 GCGTTACGTAGGTGCACCTGCGGGAGAACACACGTTCGTCTCCTATGCCTAGTACCTGCGTCGGGGGACGGGGGTCTGCAAACCACAttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47839751 90 + 51301725 GGGTTACGTAGCTGCACCTGCGGGAGGACACACATTCGTCTCCTATGCCTAGTACCTGCGTCGGGGGACGGGTGTCTGCAAACCAcattt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549578 90 + 50890351 GGGTTACGTAGGTGCACCTGCGGGAGAACACACGTTCGTCTCCTATGCCTAGTACCTGCGTCAGGGGACGGGTGTCTGCAAACCACAttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45900215 73 + 49145316 GGGTGAAGTAACTGTCCCTGCGGGAGCGCACA-GTT---------------GTCACCGCAT-GTGGGATGGGTGACTGCAAACCACtttt i calJac3.chr22 C 0 I 2278 e canFam3.chr1 102629806 1947 + 122678785 I a score=264314.000000 s hg38.chr19_GL949747v2_alt 583516 110 + 729520 caatggcaaaaaccacaattacttttgcaccaacctaaAACAGTGTCTATAGTAAACAATATTGCATCACATGCTTTGCTACCAGTATAGATCTTAAGTTTTACAAAAAA s panTro4.chr19 59858428 110 + 63644993 caatggcaaaaaccacaattacttttgcaccaacctaaAACAGTGTCTATAGTAAACAATATTGCATCACATACTTTGCTACCAGTATAGATCTTAAGTTTTACAAAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769563 110 + 60714840 caacggcaaaaaccacaattacttttgcaccagcctaaAACAGTGTCGATAGTAAACAATATTGCATCACATACTTTGCTACCAGTATAGATCTTAAGTTTTACAAAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304275 108 - 106955855 caatggcaaaaaccacaattacttttgcaccaacctaaA--Agtgtctatagtaaacaatattgcatcacatactttgctacgagtatagatcttaagttttacaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594645 110 + 64156825 cagtggcaaaaaccacaattacttttgcaccaacctaaAACAGTGTCTATAGTAAGCAATATTGAATCACATACTTTGCTAGGAGTATAGATCTTAAGTTTTACAAAAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55734306 110 + 59248254 caatggcaaaaaccacaattacttttgcaccaacctaaAACAGTGTCTATAGTAAGCAATATTGAATCACATACTGTGCTAGGAGTATAGATCTTAAGTTTTACAAAAAA i macFas5.chr19 C 0 I 810 s papAnu2.chr19 47839841 110 + 51301725 caatggcaaaaaccacaattacttttgcaccaacctaaaacAGTGTCTATAGTAAGCAATATTGAATCACATACTTTGCTAGGAGTATAGATCTTAAGTtttacaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549668 110 + 50890351 caatggcaaaaaccacaattacttttgcaccaacctaaAACAGTGTCTATAGTAAACAATATGGAATCACATACTTTGCTAGGAGTATAGATCTTAAGTTTTACAAAAAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102629806 1947 + 122678785 I e calJac3.chr22 45900288 2278 + 49145316 I a score=1179.000000 s hg38.chr19_GL949747v2_alt 583626 1 + 729520 A s panTro4.chr19 59858538 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769673 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304383 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594755 1 + 64156825 A i rheMac3.chr19 C 0 I 1213 s papAnu2.chr19 47839951 1 + 51301725 g i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549778 1 + 50890351 A i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102629806 1947 + 122678785 I e calJac3.chr22 45900288 2278 + 49145316 I e macFas5.chr19 55734416 810 + 59248254 I a score=8948.000000 s hg38.chr19_GL949747v2_alt 583627 8 + 729520 ATAAAATA s panTro4.chr19 59858539 7 + 63644993 -TAAAATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769674 7 + 60714840 -TAAGATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304384 7 - 106955855 -tAAAATA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47839952 8 + 51301725 ataaaata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549779 8 + 50890351 ATAAAATA i chlSab2.chr6 C 0 I 732 e canFam3.chr1 102629806 1947 + 122678785 I e calJac3.chr22 45900288 2278 + 49145316 I e macFas5.chr19 55734416 810 + 59248254 I e rheMac3.chr19 60594756 1213 + 64156825 I a score=4422.000000 s hg38.chr19_GL949747v2_alt 583635 8 + 729520 ATAGATAA s panTro4.chr19 59858546 8 + 63644993 ATAGATAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769681 8 + 60714840 ATAGATAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304391 8 - 106955855 ATAGATAA i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102629806 1947 + 122678785 I e calJac3.chr22 45900288 2278 + 49145316 I e chlSab2.chr6 47549787 732 + 50890351 I e papAnu2.chr19 47839960 0 + 51301725 C e macFas5.chr19 55734416 810 + 59248254 I e rheMac3.chr19 60594756 1213 + 64156825 I a score=21077.000000 s hg38.chr19_GL949747v2_alt 583643 20 + 729520 ggctgagtgaggtggctcat s panTro4.chr19 59858554 20 + 63644993 GCctgagtgaggtggctcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769689 20 + 60714840 ggctgagtgaggtggctcat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304399 20 - 106955855 ggctgagtgaggtggctcat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55735226 20 + 59248254 ggccgggcgcggtggctcac i macFas5.chr19 I 810 C 0 s papAnu2.chr19 47839960 19 + 51301725 -gccaggtgtggtggctcac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102629806 1947 + 122678785 I e calJac3.chr22 45900288 2278 + 49145316 I e chlSab2.chr6 47549787 732 + 50890351 I e rheMac3.chr19 60594756 1213 + 64156825 I a score=280811.000000 s hg38.chr19_GL949747v2_alt 583663 245 + 729520 gcc-----tgtaatcccaacactttgctaggccaaagtgggaagatcacttgagcccaggagtttaagac-caacttgggctagaaactgaga-cccccatctctac-aaaaaaat--aaaataattaa-ccgggcaaggtggtgcacgcccatagtcccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcagtgagccaagatcgcgccactgcactccagcctggggga s panTro4.chr19 59858574 245 + 63644993 gcc-----tgtaatcccaacactttgctaggccaaagtgggaagatctcttgagcccaggagtttaagac-cagcctgggctagaaactgaga-cccccatctctcc-aaaaaaat--aaaataattaa-ctgggcaaggtggtgcacgcccgtagtcccagctactggggaggctgaggcaggagaatcacttgaacccgggaggcggagcttgcagtgagccaagatcacgccactgcactccagcctggggga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769709 244 + 60714840 gcc-----tgtaatcccaacactttgctaggccaaagtgggaagatcacttgagcccaggagtttaagac-cagcctggacaagaaactgaga-cccccatctctac--aaaacat--aaaataattaa-ccgggcaaggtggtgcacgcccgtagtcccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcggagcttgcagtgagccaagatcatgccactgcactccagactgggcga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304419 245 - 106955855 gcc-----tgtaatcccaacactttgctaggccaaagtgggaagatcacttgagcccaggagtttaagac-cagcctgggaaagaaactgagaccccccatctccac--agaaaat--aaaataattaa-ccgggcaacatggtgcacgcctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggagcttgcagtgagccaagatcgcgccactgcactccagcctgggcga i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55735246 233 + 59248254 gcc-----tgtaatcccagcactttgggaggccgaggcgggcggatcac--aaggtcaggagatcgagac-------------cacggtgaaa-cc-ccgtctctactaaaaatacaaaaaaaaattag-ccgggcgcggttgtgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggcga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47839979 215 + 51301725 accctccttggcctctcagcactttgggaggccgaggcgggcagatcac--aaggtcaggagattgagactcatcctggctaacacagtgaaa-cctccgtctctactaaaaatac--aagaaaattagtctgggcgtggtgacgggcgtctgtagtcccagctactcgcgag----------------------------------agagcttgcagtgagcagagat-gcg-cactgcactctagcctgggtga i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45902566 228 + 49145316 gcc-----tgtaatcccagcacttt------cagaagcaggga-----cctgaggtcaggag----agac-cagcctggccaacgtgatgaaa-ccccc-tctctat--taataat--acaaaaattag-ctgggcgcggtggctcatgcctgtaatcccagctactaatgaggccggggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcatgccattgcacttcagcctgggtga i calJac3.chr22 I 2278 C 0 e canFam3.chr1 102629806 1947 + 122678785 I e chlSab2.chr6 47549787 732 + 50890351 I e rheMac3.chr19 60594756 1213 + 64156825 I a score=28850.000000 s hg38.chr19_GL949747v2_alt 583908 19 + 729520 c-agagcgagactccgtctc s panTro4.chr19 59858819 19 + 63644993 c-agagcgagactccgtctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769953 19 + 60714840 c-agagcgagactccgtctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304664 19 - 106955855 c-agagcgagactccgtctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55735479 19 + 59248254 c-agagcgagactccgtctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47840194 18 + 51301725 c-agagc-agactctgtctc i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45902794 18 + 49145316 ctagagcaaaact--gtctc i calJac3.chr22 C 0 I 7 s canFam3.chr1 102631753 19 + 122678785 C-AAAACAAGGTCTGGTTCC i canFam3.chr1 I 1947 C 0 e chlSab2.chr6 47549787 732 + 50890351 I e rheMac3.chr19 60594756 1213 + 64156825 I a score=23841.000000 s hg38.chr19_GL949747v2_alt 583927 11 + 729520 aaaaataaaaa s panTro4.chr19 59858838 11 + 63644993 aaaaaaaaaaa i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 56769972 11 + 60714840 agaaaaaaaaa i ponAbe2.chr19 C 0 I 5 s nomLeu3.chr10 103304683 11 - 106955855 aaaaaaaaaaa i nomLeu3.chr10 C 0 I 5 s macFas5.chr19 55735498 11 + 59248254 aaaaaaaataa i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47840212 11 + 51301725 aaaaaaaaaaa i papAnu2.chr19 C 0 M 1271 s chlSab2.chr6 47550519 11 + 50890351 aaaaaaaaaaa i chlSab2.chr6 I 732 C 0 s calJac3.chr22 45902819 11 + 49145316 aaaaaaaaaaa i calJac3.chr22 I 7 I 3 s canFam3.chr1 102631772 7 + 122678785 --AAAGAAA-- i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60594756 1213 + 64156825 I a score=348909.000000 s hg38.chr19_GL949747v2_alt 583938 211 + 729520 GCCCCAATTCCTAATTGCCAAGTCGTG-TCTCCACGTTGAAC-ATGAAGCT---GGAAAGAAGTCCAGCCAGAGGGAAATTCTGACAGTAAGCGACAGGGCAAAGGAGACG--CTGGCCTCTTCCTAGTGGAGCG---TGG------------------GATGGGAAAACA-----------------------GTTCTTACCTTTCAAATTCAATGTCCAGTTCAAAATCCATGTAATTCTCCAGGAACACCCCCTTTGCT s panTro4.chr19 59858851 211 + 63644993 GCCCCAATTCCTAATTGCCAAGTCGTG-TCTCCACGTTGAAC-GTGAAGCT---GGAAAGAAGTCCAGCCAGAGGGAAATTCTGACAGTAAGTGACAGGGCAAAGGAGACG--CTGGCCTCTTCCTAGTGGAGCG---TGG------------------GATGGGAAAACA-----------------------GTTCTTACCTTTCAAATTCAATGTCCAGTTCAAAATCCATGTAATTCTCCAGGAACACCCCCTTTGCT i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 56769988 209 + 60714840 GCCCCAATTCCTAATTGCCAAGTCGTG-TCTCCACGTTGAAC-GTGAAGCT---GGAAAGAAGTCCAGCCAGAGGGAAAT--TGACAGTAAGCGACAGGGCAAAGGAGACG--CAGGCCTCTTCCTAGTGGAGCG---TGG------------------GATGGGAAAACA-----------------------GTTCTTACCTCTCAAATTCAATGTCCAGTTCAGAATCCATGTAATTCTCCAGGAACACCCCCTTTGCT i ponAbe2.chr19 I 5 C 0 s nomLeu3.chr10 103304699 211 - 106955855 aCCCCAATTCCTAATTGCCAAGTCGTG-TCTCCGCGTTGAAC-GTGAAGCT---GGAAGGAAGTCCAGCCAGAGGGAAATTCTGACCGTTAGCGACAGGGCACAGGAGACG--CTGGCCTCTTCCTAGTGGAGCG---TGG------------------AATGGGAAAGCA-----------------------GTTCTTACCTCTCAAATTCAATATCCGGTTCAAAACCCACGTAATTCTCCAGGAACACCCCCTTTGCT i nomLeu3.chr10 I 5 C 0 s macFas5.chr19 55735520 181 + 59248254 -------------------aaat-------------taaaaaaataaaaaa---ataaGAAAGTCCAGCCAGAGGGAAATTGTGACCGTCAGCCACAGGGCACAGGAGACG--CCGGCCTCTTCCTAGTGGAGCG---TGG------------------GTTGGGAAAACA-----------------------GTCCTTACCTCTCAAATTCAATGTCTGCTTCGAAATCCACGTAATTCTCCAGGAACACCCCCTTTGCT i macFas5.chr19 I 11 C 0 s papAnu2.chr19 3419449 180 - 51301725 ------------------------------------------------------aaaaaagagtccaaaaAGAGGGAATTCCTGACCCTAAGCCACAGCACATAGGAGGCT--CTGGCCTCTTCCTAAGGGCGCA---TGGGATGAGGCTAAACGACCAGTCGAGTGAAAG-----------------------GTTCCTACCTCTCAGCCTCAGCATTGGATTCAGACGCAGCGACATTCTCCGGGAGCGTCTCCTTTCTT i papAnu2.chr19 I 1583 I 3 s chlSab2.chr6 47550530 205 + 50890351 GCCCCAATTCCTAATTGTCAAATCGCG-TCTCCGTGTTGAACTGTGAAGCT---GGAAGAAAGTCCAGCCAGAGGGAAATTCTGACCGTCAGCCAC-------AGGAGACG--CTGGCCTCTTCCTAGTGGAGCG---TGG------------------GATGGGAAAACA-----------------------GTTCTTACCTCTCAAATTCAATGTCTGGTTCGATATCCACGTAATTCTCCAGGAACACCCCCTTTGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45902833 207 + 49145316 aaCCCAATTCCTAATTGACAAATCGTA-TCTGTGTGTTGAAC-ATGAAGC-------AGGAAGACCAGCCAGAGGGAAATTCTGACCTTAAGCTACAAGGCACAGGAGACA--CTGGCCTCCTCCTGGTGGAACG---TGG------------------GATGGGAAAGTC-----------------------GTTCTTACCTCTCTAACTCCAAGTCCGGTTCAAGGTCCACGTAATTCTCCAGGAACACCCCCTTTGCT i calJac3.chr22 I 3 C 0 s canFam3.chr1 102631779 243 + 122678785 GATCCCATCCCTAATCCGAACATTGTGTTCCCCACCTTGAAG-AGCAAGCTAGCAGAAGAAATTCTGGCAAGAAGAAAATTCTGATCCTATGCCAAGGGAGCGGGGGGACACTCTGCCCTGTTTCTAACGCAGGGGATGAG------------------GCTGAAAAAGCAAGCTAACAGAGTGAACAGTGAGGATTCTTACCGGTCAGCCTGGTCCTCTGATTCTGACACAGCATCATTCTCCAGAAACATCCCCTTTTCT i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60594756 1213 + 64156825 I a score=125033.000000 s hg38.chr19_GL949747v2_alt 584149 38 + 729520 ACCTGCAGTGAGAGTTTCTGCAAGTCTTGACAATGCTT s panTro4.chr19 59859062 38 + 63644993 ACCTGCAGTGAGAGTTTCTGCAAGTCTTGACAATGCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56770197 38 + 60714840 ACCTGCAGTGAGAGTTTCTGCAAGTCTTGACAATGCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304910 38 - 106955855 ACCTGCAGTGAGAGTTTCTGCAAGTCTTGACAATGCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60595969 38 + 64156825 ACCTGCAGTGACATTTTCTGCAAGTTTTGACAGTGCTT i rheMac3.chr19 I 1213 I 49 s macFas5.chr19 55735701 38 + 59248254 ATCTGCAGTGAGACTTTCTCCAAGTCTCGACAATGCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3419632 38 - 51301725 ACCTGCAGTGACATTTTCTCCAAGTTTGGACAGTGCTT i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47550735 38 + 50890351 ACCTGCAGTGAGACTTTCTCCAAGTCTGGACACTGCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45903040 38 + 49145316 ACCTGCAGCGAGAGTTTCTCCAAGTCTGGACAGTGCTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102632022 38 + 122678785 ATCTGCAGCCACATTTTCTGCAAGCTTTCACAATGCTT i canFam3.chr1 C 0 C 0 a score=88309.000000 s hg38.chr19_GL949747v2_alt 584187 52 + 729520 CAGGCTGAAGGAACAATGCATCACTTCAGAAGTATTTGTCAGGTGAATAGAA s panTro4.chr19 59859100 52 + 63644993 CAGGCTGAAGGAACAATGCCTCACTTCAGAAGTATTTGTCAGGTGAATAGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56770235 52 + 60714840 CAGGCTGAAGGAACAATGCATCACTTCAGAAGTATTTGTCAAGTGAATAGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304948 52 - 106955855 CAGGCTGAAGGAACACTGCATCATTTCAGAAATATTTGTCAAGTGAACAGAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55735739 52 + 59248254 CAGGCTGAAGGAACAGTGCATCATTTCAGAAGTATTTGTCAAGTTAATAGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3419670 49 - 51301725 GAAGCAGAATGATGACGGCGCAATGTCTACTGCATTT---AAGTGCAGGGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47550773 52 + 50890351 CAGGCTGAAGGAACAGTGCATGATTTCAGAAGTATTTGCCAACTTAATAGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45903078 52 + 49145316 CAGGCTGAAATAACACTGCACCATCTCAGACTTACTTGTCAAGTGAACAGAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102632060 52 + 122678785 GAGGCAAAAGGATGCATGCATGATGTCTGAGGTATCTTTGAAAACCAGGGAC i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60596007 49 + 64156825 I a score=209419.000000 s hg38.chr19_GL949747v2_alt 584239 64 + 729520 ATTTCCTTGAACGGGGCCACCACCACCTTCGCCAGCTCCTCCTCCTGAGACTCATACAGGCAGC s panTro4.chr19 59859152 64 + 63644993 ATTTCCTTCAACGGGGCCACCACCACCTTCGCCAGCTCCTCCTCCTGAGACTCATACAGGCAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56770287 64 + 60714840 ATTTCCTTGAAAGGGGCCACCACCACCTTCGCCAGCTCCTCCTCCTGAGACTCATACAGGCAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103305000 64 - 106955855 ATTTCCTTGAACGGGGCCACTACGACCTTCGCCAGCTCCTCCTCCTGAGACTCATACAGGCAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60596056 64 + 64156825 ATTTCTTTGAACTGAGCCATCACCTCCTTCACCAGCTCGTCCTCCTGAGACTCGTACAGACAGC i rheMac3.chr19 I 49 I 55 s macFas5.chr19 55735791 64 + 59248254 ATTTTCTTGAGCGGGGCCACCACCACCTTCGCCAGCTCCTCCTCCTGAGACTCGTACAGGCAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3419719 64 - 51301725 ATTTCTTTGAACTGAGCCATCACCTCCTTCACCAGCTCGTCCTCCTGAGACTCGTACAGACAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47550825 64 + 50890351 ATTTTCTTGAGCGGGGCCACCACCACCTTCGCCAGCTCCTCCTCCTGAGACTCGTACAGGCAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45903130 64 + 49145316 ATTTCCCTGAACGGGGCCATCACCGCCTTCGTCAGCTCCCCCTCCTGAGACTCATACAGGCAGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 102632112 64 + 122678785 ACTTCTGTCACCTGGACCATGGCTTCCTTCACAAGCTGCTCCTCCTGGGATTCATAGAGACAGT i canFam3.chr1 C 0 C 0 a score=95886.000000 s hg38.chr19_GL949747v2_alt 584303 58 + 729520 CCAAGACCTCCTTCAGGTCGGTCAC---GGATAAGGGCTTATTTGCATGAAGATGTGCTTT s panTro4.chr19 59859216 58 + 63644993 CCAAGACCTCCCTCAGGTCGGTCAC---GGATAAGGACTTATTTGCATGAAGATGTGCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56770351 58 + 60714840 CCAAGACTTCCTTCAGGTCGGTCAT---GGATAAGGGCTTATTTGCATGAAGATGTGCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103305064 58 - 106955855 ACAAGACCTCCTTCAGGTCGGTCAT---GGATATGGACTTATTTGCATGAAGATGTGCTTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55735855 58 + 59248254 ACAAGACCTCCTTCAGGTCTGTCAT---GGATAAGGGCTTATCGGCATGAAGACTGGCTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3419783 55 - 51301725 AGAGGAGCTCCTTCAGGTCCGCCAC---CGTGGAATGTCCATTCTTACGACTTATGTC--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47550889 58 + 50890351 ACAAGACCTCCTTCAGGTCTGTCAT---GGATAAGGGCTTATTGGCATGAAGATTGGCTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45903194 58 + 49145316 ACAAGAGCTCCCTCAGGCCTGCCAT---CGACGACGGCTTCTTTACGTGAAGATTCGCTCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102632176 61 + 122678785 GCAAAGTCTCCTTCGTGTCTGTCACCGAGGAGAAGGGTCTGTTCTCAGGAGACCCTACCCT i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60596120 55 + 64156825 I a score=175702.000000 s hg38.chr19_GL949747v2_alt 584361 52 + 729520 GCATTGCAGCAATTCCTGTTTGATGTCCGGTGACATCCGGCAGCCAAAAGTG s panTro4.chr19 59859274 52 + 63644993 GCACCGCAGCAATTCCTGTTTGATGTCCGGTGACATCCGGCAGCCAAAAGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56770409 52 + 60714840 GCATCGCAGTAATTCCTGTTTGATGTCTGGTGATATCCGGCAGCCAAAAGCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103305122 52 - 106955855 GCATCGCAGCAACTCCTGTTTGATGTCTGGTGACATCTGGCAGCCAAAAGTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60596175 52 + 64156825 GCATCGCAGCAATTCCTGTTTGATCTCTGGTGACATCCGCCAGCCAAAGGTG i rheMac3.chr19 I 55 C 0 s macFas5.chr19 55735913 52 + 59248254 GCATCGCAGCAATTCCTGTTTGATCTCCGGTGACATCTGGCAGCCAAAAGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3419838 52 - 51301725 GCATCGCAGCAATTCCTGTTTGATCTCTGGTGACATCCGGCAGCCAAAGGTG i papAnu2.chr19 C 0 I 48039 s chlSab2.chr6 47550947 52 + 50890351 GCATCGCAGTAATTCCTGTTTGATCTCCGGTGACATCCGGCAGCCAAAGGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45903252 52 + 49145316 GCACCGCAGCAGTTCCTGTTTGATCTCCCGTGACATCACGCAGCCGAAAGTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 102632237 52 + 122678785 GCATTCCAGCAGTTCCTGCTTGACCTTGGTGGACACCAGGCAGCCAAAAGTC i canFam3.chr1 C 0 C 0 a score=3698472.000000 s hg38.chr19_GL949747v2_alt 584413 1051 + 729520 GCCTCCAACTCCTTGGCTCTCTTCTCGTTAGCGAGGCCGAATAAGAAGTGTCCTACTTGAATCAGGTCGGGGTTCTTGAGTCTTTCTTCTCCGGAAAGCAGCTTCTGTACGTCCCCGATGTCCCAGGCGTGG-CCGTCCCT--------GTCCTCCCCCTCCTCCTTCTCCAGGGCGTAGAACAGGGCAGTGAGAAACTGCTGGAAGCTGAGGTGGATGAAGGAGTAGCAGCCTTTGGAGACTCTGTCCTGGCGGAGGATGTCTCCGTCCAGGAACAGACGGAGGTCGGACTCCTGCACCCCGAGCCTTTCCAGGTCCTCTCGGTGGAACACGGACATCTGCGCCCACAGGCCCTGCGCGGCCAGGAGGCTCAGCGTCCGCAGCGCGCCCCGCAGCTGTG------------CGCCCTGCGGG------AACCGGCTGCAGAGGAAACGCAGGAACAGCCCCGTGCGGGTGAGGCAGGTGGGGACCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACAATCCAGCACACCGCGGGGGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATTAGCTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAAGCCCTCCACCCTTACGTAGATCGGCTGCTGCGCCAGGAGCTGGAGGTCCCTCAGTGCCCTGGGCCGCGTGGTGACCAGCAAGGCTGCCCTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACGGGCACCGGCTTCTTCTTCTCCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCATCAAGGCCATCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCAGGGGCCCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAACGCGTATCTGAGCGTCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGCG s panTro4.chr19 59859326 1051 + 63644993 GCCTCCAACTCCTTGGCTCTCTTCTCGTTAGCGAGGCCGAATAAGAAGTGTCCTACTTGAATCAGGTCGGGGTTCTTGAGTCTTTCTTCTCCGGAAAGCAGCTTCTGTACGTCCCCAATGTCCGAGGTGTGG-CCGTCCCT--------GTCCTCCTCCTCCTCCTTCTCCAGGGCGTAGAACAGCGCAGCGAAAAACTGCTGGAAGCTGAGGTGGATGAAGGAGTAGCAGCCTTTGGAGACTCTGTCCTGGCGGAGGATGTCTCCGTCCAGGAACAGACGGAGGTCGGACTCCTGCACCCCGAGCCTTTCCAGGTCCTCTCGGTGGAACACGGACATCTGCGCCCACAGGCCCTGCGCGGCCAGGAGGCTCAGCGTCCGCAGCGCGCCCCGCAGCTGTG------------CGCCCTGCGGG------AACCGGCTGCAGAGGAAGCGCAGGAACAGCCCCGTGCGGGTGAGGCAGGTGGGGACCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCACACCGCGGGGGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATTAGCTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAAGCCCTCCACCCTTACGTAGATCGGCTGCTGCGCCAGGAGCTGGAGGTCCCTCAGTGCCCTGGGCCGCGTGGTGACCAGCAGGGCTGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACGGGCACCGGCTTCTTCTTCTCCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCATCAAGGCCATCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCAGGGGCCCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAACGCGTATCTGACCGTCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56770461 1048 + 60714840 GCCTCCAACTCGTTGGCTCTCTTCTCGTTAGCGAGGCCGAATAAGAAGTGTCCTACTTGGATCAGGTCGGGGTTCCTGACTCTTTCTTCTCCGGAAAGCAGCTTCTGTATGTCCCCAATGTCCCAGGCGTGG-CCGTCCCT--------GTCCT---CCTCCTCCTTCTCCAGGGCGTAGAACAGCCCAGCGAAAAACTGCTGGACGCTGAGGTGGATGAAGGAGTAGCAGCCTTTGGAGACTCTGTCCTGGCGAAGGATGTCTCCGTCCAGGAACAGACGGAGGTCGGACTCCTGCACCCCGAGCCTTTCCAGGTCCTCTTGGTGGAACACGGACATCTGCGCCCACAGGCCCTGCGCGGCCAGAAAGCTCAGCGTCCGCAGCGCGCCCTGCAGCTGTG------------CGCCCTGTGGG------AACCGGCTGCAGAGGAAGCGCAAGAACAGCCCCGTGCGGGTGAGGCAGGTGGGGACCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCACACCGCGGGGGCCGACCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATCAGCTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAAGCCCTCCACCCTTATGTAGATTGGCTGCTGCGCCAGGAGCTGGAGGTCCCTCAGTGCCCTGGGCCGCGTGGTGACCAGCAGGGCGGCCTTGGGTAACATATACCTGTTCAGCAAACTCCCCAGGAGGACGGGCACCGGCTTCTTCTTCTCCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCTTCAAGGCCGTCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAACTCAGGCCAGTCTTTGGAGATTAGCTCTGCAAAACTGCACGGGCCCATGTGGCTGAGCTCCTTGCAGCTGAGGTAGAACGCGTATCTGACCGTCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103305174 1051 - 106955855 GCCTCCAGCTCCTTGGCTCTCTTCTCATTAGCGAGGCCGAATAAGAAGTGTCCTACTTGAATCAGGTCGGGGTCCTTGAGTCTTTCTTCTCCGGAAAGCAGCTTCTGCACGTCCCCAATGTCCCAGGCGTGG-CCGTCCCT--------GTCCTCTTCCTCCTCCTTCTCCAGGGCGTAGAACAGCGCAGCGAAAAACTGCTGGAAGCTGAGGTGGATGAAGGAGTAGCAGCCTTTGGAGTCTCTGTCCTGGCGGAGGATGTGTCCGTCCAGGAACGGGCGGAGGTCGGACTCCTGCACCCCGAGCCTTTCCAGGTCCTCTCGGTGGAGCACAGACATCTGCGCCCACAGCCCCTGCGCGGCCAGGAGGCTCAGCTTCCGCAGCGCGCCCCGCAGCTGTC------------CGCCCTGCGGG------AACTGGCTGCAGAGGAAGCGCAGGAACAGCCCCGTGCGGGTGAGGCAAGTGGGGGCCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCACACCGCCGGGGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATCAGCTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAAGCCCTCCACCCTTATGTAGATTGGCTGCTGCGCCAGGAGCTGTAGATCCCTCAGTACCCTGGGCCGCGTGGTGACCAGCAGGGCGGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACCGGCACCGGCTTCTTCTTCTCCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGAACTTTCAGCTCATCAAGGCCATCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCAGGGGCCCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAACGCGTATCTGACCGTCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGCG i nomLeu3.chr10 C 0 M 207 s rheMac3.chr19 60596227 1051 + 64156825 GCCTCCAACTCCTTGACTCTCTTCTCATTAGCCAGGCCGAACAAGAAGCGTCCTGCCTGGATCAGGTCGGGGTTCTTGAGTCTTTCTTCTTCGGAAAGCAGCTTCTGCACGTCCCCAATGTCCCAGGCATGG-CCGTCCCT--------GtcctcctcctcctcctcctccAGGGCGTAGAACAGCGCAGTGAGAAACTGCTGGAAGCTGAGGTGGATGAAGGAGTAGCAGCCTTTGGCGACTCCGTCCTGGCGGAGGATGTCTCTGTCCAGGAACAGGCGGAGGTCGGACTCCTGCACCCCAGCGCTTTCCAGGTCCTCTCCGTGGAGCACGGACATCTGCGCCCACAAACTCTGCGCGGCCAGGAGGCTCAGCGCCCGCAGCGCGCCCCGGAGCTGTG------------CGCCCTGCGGG------AACTGGCTGCAGAGGAAGCGCAGGAACAGCCCCGTGCTGGTGAGGCAGGTGGGGGCCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCACACCGCGGGCGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATCAGCTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAACCCCTCCACCCTTATGTAGATGGGCTGCTGCACCAGGAGCTGGAGGTCCCTCAGGGCCCTGGGCCGCGTGGTGACCAGCAGGGTTGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACCGGCACCGGCTTCTGCTGCTCCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCATCAAGGCCGTCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCACGGGCCCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAAAGCGTATCTGACAGTCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55735965 1051 + 59248254 GCCTCCAACTCCTTGACTCTCTTCTCATTAGCCAGGCCGAACAAGAAGTGCCCTACTTGGATCAGGTCGGGGTTCTTGAGTCTTTCTTCTTCGGAAAGCAGCTTCTGCACGTCCCCAATGTCCCAGGCATGA-CCGTCCCT--------GtcctcctcctcctcctcctccAGGGCGTAGAACAGCGCAGTGAGAAACTGCTGGAAGCTGAGGTGGATGAAGGAGTAGCAGCCTTTGGCGACTCCGTCCTGGCGGAGGATGTTTCTGTCCAGGAACAGGCGGAGGTCGGACTCCTGCACCCCAGCGCTTTCCAGGTCCTCTCCGTGGAGCACGGACATCTGCGCCCACAAACCCTGCGCGGCCAGGAGGCTCAGCGCCCGCAGCGCGCCCCGGAGCTGTG------------CGCCCTGCGGG------AACTGGCTGCAGAGGAAGCGCAGGAACAGCCCCGTGCTGGTGAGGCAGGTGGGGGCCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCACACCGCGGGCGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATCAGCTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAACCCCTCCACCCTTATGTAGATGGGCTGCTGCACCAGGAGCTGGAGGTCCCTCAGGGCCCTGGGCCGCGTGGTGACCAGCAGGGTTGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACCGGCACCGGCTTCTGCTGCTCCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCATCAAGGCCGTCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCACGGGCCCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAAAGCGTATCTGGCAGTCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47841511 1048 + 51301725 GCCTCCAACTCCTTGACTCTC-TCTCATTAG-CAGGCCGAATAAGAAGTGCCCTACTTGGATCAGGTCGGGGTTCTTGAGTCTTTCTTCTTCGGAAAGCAGCTTCTGCACGTCCCCAATGTCCCAGGCATGGCCCgtccct--------gtcctcctcctcct--ttctgcaGGGCGTAGAACAGCGCAGTGAGAAACtgctggaagctgaggtggatgaaGGAGTAGCAGCCTTTGGAGACTCTGTCCTGGCGGAGGATGTCTCTGTCCAGGAACAGGCGGAGGTCGGACTCCTGCACCCCGGCCCTTTCCAGGTCCTCTCCGTGGAGCACGGACATCTGCGCCCACAAACCCTGCGCGGCCAGGAGGCTCAGCGCCCGCAGCGCGCCCCAGAGCTGTG------------CGCCCTGCGGG------AACTGGCTGCAGAGGAAGCGCAGGAACAGCCCCGTGCTGGTGAGGCAGGTGGGGGCCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCACACCGCGGGTGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATCAACTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCGAAGTGTCTCAGGAAATAGGCCCTCCTGTCCGACTCCAGGAACCCCTCCACCCTTATGTAGGTGGGCTGCTGCACCAGGAGCTGGAGGTCCCTCAGGGCCCTGGGCCGCGTGGTGACCAGCAGGGTTGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACCGGCACCGGCTTCTGCTGCGTCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCATCGAGGCCGTCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCACGGGCCCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAAAGCGTATCTGACCATCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGTG i papAnu2.chr19 M 1271 C 0 s chlSab2.chr6 47550999 1051 + 50890351 GCCTCCAACTCCTTCACTCTCTTCTCATTAGCCAGGCCGAATAAGAAGTGCCCTACTTGGATCAGGTCGGGGTTCTTGAGTCTTTCTTCTTCGGAAAGCAGCTTCTGCACGTCCCCAATGTCCCAGGCATGG-CCGTCCCT--------GtcctcctcctcctccttctccAGGGCGTAGAACAGCGCAGTGAGAAACTGCTGGAAGCTGAGGTGGATGAAGGAGTAGCAGCTTTTGGAGACTCTGTCCTGGTGGAGGATGTCTCTGTCCAGGAACGGACGGAGGTCGGACTCCTGCACCCCAGCGCTTTCCAGGTCCTCTCTGTGGAGCACGGACATCTGCGCCCACAAACTCTGCGCGGCCAGGAGGCTCAGCGCCCGCAGAGCGCCCCGGAGCTGTG------------CGCCCTGCGGG------AACTGGCTGCAGAGGAAACGCAGGAACAGCTCCGTGCTGGTGAGGCAGGTGGGGGCCGGGTCCTCCCCATTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCATACCGCGGGCGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATCAACTCAAAGGCACGCATGGCTTGGTCCTCCTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAACCCTTCCACCCTTATGTAGATGGGCTGCTGCACCAGGAGCTGGAGGTCCCTCAGGGCCCTGGGCCGCGTGGTGACCAGCAGGGTTGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAAGAGGACCGGCACCGGCTTCTGCTGCTTCCAGTCCCCGCATATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCATCAAGGCCGTCGACCACGAACAAGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCACGGGCGCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAAAGCGTATCTGACCGTCGGGCTGAGGTTGCAGTCTGACCAGTCCAGCATACACTTTTTGGCCAGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45903304 1048 + 49145316 GTCTCCAACTCCGCGGCTCTCTTCTCGTTGGCAAGGCCGAATAAGAAGTGTCCCGCTTGGATCAGGTCGGGGTTCTGGACTCTTTCTTCTCCAGAAAGCAGCCTCTGCACATCCCCAATGTCCCAGGCGTGG-CCGTCCCT--------GTCCT---CCTCCTCCTTCTCCAGGGCGTAGAACAGCGCAGTGAAAAACTGCTGGAAGCTGAGGTGGAGGAAGGAGTAGCAGTCTTTAGAGTCTCTATCCTGGCGGAGGATGCCTCTGTCCAGGAACGGGCGGAGGTCGGACTCCTGCACCCCGAAGCTCTCCAGGTCCTCTCTGTGGAACACGGACATCTGCGCCCACAGGCCCTGCGCAGCCAGGATGCTCAGCGCCCGCAGCGTGCCCCCGAGCTGTG------------CACCCTTCGGG------AAGCGGCTGCAGAGAAAGTGCAGGAACAGCCCCGTGCAGGTGTGGCAGGTGGTGGCCGGGTCCTCCCCATTCTCCATCTGCAGCTTCAGACTCGTGCACACCATCCAGCACACCGCGGGCGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTTCTCATCAGCTCAAAGGCACGCGTGGCTTGGTCCTCCTCTCCAAAGTGTGTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAACCCCTCCACCCTTATGTAGATGGGCTTCTCGGCCAGGAGCTGCAGGTCCCTCAGGGACCTGGGCCGTGTGGTGACCAGCAGGGCGGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACCGGCACCGGCTTCGGCTTCAGCCAGTCCCCGCAGATGTCGTAGATCAGCG------CCCCGGGGGGCACTCTCAGCTCATCGAGGCCGTCGACCACAATCAGGATTCTCTGTGCTTGGGCGAGGATGTCTGGAATGTCATCCTGCAATTCCGGCTGGTCTCTGGCGATCAGCTCTGCAAAACTGCACGGGCCCAGCCGGCTGAGCCCCTTGCAGCTGAGGTAGAAAGCGTACCTGGCCTTTGGGCCGAGGTTGTAGTCTTTCCAGTCCAGCATACACTTCTTGGCCAGCG i calJac3.chr22 C 0 C 0 s canFam3.chr1 102632289 1081 + 122678785 ATCCCCAGCTCCCTGGCCCTCTTTTCATTGGTGAGGCCAAATAGGAAGTGCCCCACGGGGGCTAGGTAGGGGTTCTTGAGTCCTTCTTCCTTGGAGAGGAGCCTCTGCACATTCCCAGCATCCCAGCTAGGG-C--TTCCTGCTGGAAGGTCTTGGTGGTCCTGGCTCCCCAGAATGTAGAGGGCAGCGGCCAGGAACTGCTGGACACTCAGGTGGAGGAAGCAGTAGCAGCCCTCACAGTCTCTGCTCTTCTGGAGGATATTCCTGTTCAGGAAAGGGTGCAGGTCAGACTCATGCACACCCAGCCTGAGCAGGTCATGTCCATCAAACACTGAGGTCTGTGTCCACACGCCCTCAGTGGCCAGCAGGCACAGAGCGTGCAGAGTAGACCTGAGGTGCAGCCCCAGACAGCTGCCCTGCGCGGGCGCAAACTGGCTGCAGAGGAAACGCAGCAACAACGATGTGGTGGTCTGGCAGGTGGGGCCAGGGTCCTCACCCTCGTCCATCTGCAGCTTCAGGCAGGTGCACACCATCCAGCACACAGCGGGTGCCGCGCCCATTTGGAACAGCGTTGCATTGCTCTTCATCAGGTGGAAAGCACGCAGCGCCTGAGCCTCCTCTCCAAAGTGTCTCAGGAAATACGCCTTCCTGTCACACTCTGAGAGCCCCTCGATCTCCACGAAGAGTGGCTGCTCCACCATGAGCCGCAGCTCCCTTAGGGCCTCGGGCCGTGTGGTGACCAGTAGGGCGGCCGTGGGTAAGAGCTTTCTCTTCAGTAAGCTCCCCAGGAGGGTGGACGCAGGCCTCTGTGTCTTCCAGTCCACACACAGGTCGTGCACCAGCGCCTCCACCCCTGAGGGCACGCGCAGCTCCTCGAAAGCATCAATGACAAACAGGAGTTTCTGTGCCTGGGTCAGGACCTGTGCAAGGGCATCCTGCAGGTCTGGGGCACTCTGGGCCAGGAGTTCTATGAAGGAGCACATCCCCTTGCGGCTGAGCGCCTTGCAGCTGAGATAGAAGGCAGTGGGGCAGGTCTGTGCAAGGCTGTCCTCTGTCCAGTCCAGCATGCACTTCTTGGCCAGAG i canFam3.chr1 C 0 C 0 a score=163138.000000 s hg38.chr19_GL949747v2_alt 585464 45 + 729520 TGGTTTTCCCCACGCCTGCGGGGCCGTGCAGCACCACCGTGTAAG s panTro4.chr19 59860377 45 + 63644993 TGGTTTTCCCCACGCCCGCGGGGCCGTGCAGCACCACCGTGTAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771509 45 + 60714840 TGGTTTTCCCCACGCCCGCGGGGCCGTGCAGCACCACTGTGTAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3617664 44 + 106955855 TGGTTTT-CCCAAGGCTGCAGGACCGTGCAGCACCACCGTGTAGG i nomLeu3.chr10 n 0 I 31972 s rheMac3.chr19 60597278 45 + 64156825 TGGTTTTCCCCACGCCCGCGGGGCCGTGCAGCACCACGGTGTAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737016 45 + 59248254 TGGTTTTCCCCACGCCCGCGGGGCCGTGCAGCACCACGGTGTAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47842559 45 + 51301725 TGGTTTTCCCCACGCCCGCGGGGCCGTGCAGCACCACGGTGTAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552050 45 + 50890351 TGGTTTTCCCCACGCCCGCGGGGCCGTGCAGCACCACGGTGTAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904352 45 + 49145316 TGGTTTTCCCCACACCCGCAGGACCGTGCAGAACCACCGTGTAAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 102633370 45 + 122678785 TGGTCTTCCCAACGCCCGCAGGACCATGCAGCACCACCGTGTGTG i canFam3.chr1 C 0 C 0 a score=388882.000000 s hg38.chr19_GL949747v2_alt 585509 165 + 729520 GTGTTAGCTTCCTGGGTGTTCTGGGATTCAAGAATGGAATGAACCGTTGGTTTCTCAGAGTGACGTCGTCATGGAAATTGTCAATGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CAAAGACTGTTTCTCCATTGAATTTCTCCATCCTTCCTTTTCACCTGCAG s panTro4.chr19 59860422 165 + 63644993 GTGTTAGCTTCCCGGGTGTTCTGGGATTCAAGAATGGAATGAACCGTTGGTTTCTCAGAGTGACGGCGTCATGGAAATTGTCAATGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CGAAGATTGTTTCTCCATTGAATTTCTCCATCCTTCCTTTTCACCTACAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771554 165 + 60714840 GTGTTAGCTTCCTGGGTGTTATGGGATTCAAGAATGGAATGAACCGTAGGTTTCTCAGAGTGACGTCGTCATGGAAACTGTCAATGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CAAAGATTGTTTCTCCATTGAATTTCTCCGTCCTTCCTTTACACCTGCAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60597323 165 + 64156825 GTGTTAGCTTCCTCGGTGTGCTGGGATTCAAGAATGGAATGAACCGTTGGTTTCTCTGAATGACGTCGTCATGGAAACTGTCAATGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CAAAGATTGTTTCTGCACTGAATTTCTCTGTCCCTCCTTTTCACCTGCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737061 165 + 59248254 GTGTTAGCTTCCTCGGTGTGCTGGGATTCAAGAATGGAATGAACCGTTGGTTTCTCTGAATGACGTCGTCATGGAAACTGTCAATGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CAAAGATTGTTTCTGCACTGAATTTCTCTGTCCCTCCTTTTCACCTGCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47842604 165 + 51301725 GTGTTAGCTTCCCGGGTGTTCTGGGATTCAAGAATGGAATGAACCGCTGGTGTCTCAGAATGACGTCGTCATGGAAACTGTCAATGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CAAAGATTGTTTCTGCATTGAATTTCTCCGTCCCTCCTTTTCACCTGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552095 165 + 50890351 GTGTTAGCTTCCCGGGTGTTCTGGCATTCAAGAATGGAATGAACCGTTGGTTTCTCCGAATGACGTCGTCATGGAAACTGTCAGTGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CAAAGATTGTTTCTGCATTGAGTTTCTCCGTCCCTCCTTTTCACCTGCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904397 165 + 49145316 GGGCTGGCTGCGTGGGTCTTCTGGGATTCAAGAATGGAATGAACCTTTGGTTTCTCTGAGTGACATGGTCGTGGAAATTGTCACTGTCTCCTCGCCAAAAAGTGTTCCGCGAGAC---CAAAGACTGTTCGTCAGTCACGTTTCTCCATCCTTCCTTCTCACCTGCAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 102633415 165 + 122678785 GAAATGGTCCTGCAAGCATTTTAGGATTACAGAATGGGATCAGTGTCTCATATTTCTGGGTGACAGTG---TGAATGTTTTCACTGGCTCCAGGCCAAAAGTTCTTCTTCCACATTTGCTGGACCTTCTCTTTCAATATACTTATATACTTATCTTGTTTACCTTCAG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 3617708 31972 + 106955855 I a score=20106.000000 s hg38.chr19_GL949747v2_alt 585674 5 + 729520 TGACA s panTro4.chr19 59860587 5 + 63644993 TGACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771719 5 + 60714840 TGACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306436 5 - 106955855 TGACA i nomLeu3.chr10 M 207 C 0 s rheMac3.chr19 60597488 5 + 64156825 TGACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737226 5 + 59248254 TGACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47842769 5 + 51301725 TGACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552260 5 + 50890351 TGACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904562 5 + 49145316 TGACA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102633580 5 + 122678785 TGATA i canFam3.chr1 C 0 I 30 a score=161631.000000 s hg38.chr19_GL949747v2_alt 585679 61 + 729520 GCCCATAGGACAGTTGAGGTTGATGATGATGATTTTCTG--AATTATTTTGTCAAGTACCAGA s panTro4.chr19 59860592 63 + 63644993 GCCCATAGGACAGTTGAGGTTGATGATGATGCTCTTCTGAAAATTACTTAGTCAAGTACCAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771724 63 + 60714840 GCCCATAGGACAGTTGAGGCTGATGATGATGCTCTTCTGAAAATTACTTTGTCAAGTACCAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306441 63 - 106955855 GCCCATAGGACAGTTGAGGCTGATGATGATGCTCTTCTGAAAATTACCTTGTCAAGTACCAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60597493 63 + 64156825 GCCCACAGGACAGTTCAGGTTGATGATTACACTCTTCTGAAAATAACTTTGCCAAGTACCAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737231 63 + 59248254 GCCCACAGGACAGTTCAGGTTGATGATTACACTCTTCTGAAAATAACTTTGCCAAGTACCAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47842774 63 + 51301725 GCCCATAGGACAGTCGAGGTTGATGATTACGCTCTTCTAAAAATAACTTTGCCAAGTACCAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552265 63 + 50890351 GCCCATAGGACAGTTGAGGTTGATGATTACACTCTTCTGAAAATTACTTTGCCAAGTACCAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904567 62 + 49145316 GACCACAGGACAGGTGAGGTTGGGGA-GATATTCATCTGAAAATGACTGTGTAAAGTACCAGA i calJac3.chr22 C 0 I 1893 e canFam3.chr1 102633585 30 + 122678785 I a score=39240.000000 s hg38.chr19_GL949747v2_alt 585740 16 + 729520 AATGAGggccaggcac s panTro4.chr19 59860655 16 + 63644993 AATGAGggccaggcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771787 16 + 60714840 AATGAGggccaggcac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306504 16 - 106955855 AATGAGggccaggcac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60597556 16 + 64156825 AATGAGggccgggtac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737294 16 + 59248254 AATGAGggccgggtac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47842837 16 + 51301725 AATgagggccgggtac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552328 16 + 50890351 AATGAGggccgggtac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102633585 30 + 122678785 I e calJac3.chr22 45904629 1893 + 49145316 I a score=10476.000000 s hg38.chr19_GL949747v2_alt 585756 3 + 729520 ggt s panTro4.chr19 59860671 3 + 63644993 ggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771803 3 + 60714840 ggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306520 3 - 106955855 ggt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60597572 3 + 64156825 ggt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737310 3 + 59248254 ggt i macFas5.chr19 C 0 I 541 s papAnu2.chr19 47842853 3 + 51301725 ggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552344 3 + 50890351 ggt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3237880 3 - 49145316 ggt i calJac3.chr22 I 39388 C 0 e canFam3.chr1 102633585 30 + 122678785 I a score=785473.000000 s hg38.chr19_GL949747v2_alt 585759 267 + 729520 gtctcatgcttgtaatcccggcactttgggaggccaaggtgggtggatcacttgaggtcaggagttcaagaccagcctggccaagatagtgaaaccccatctctactaaaaatacaaaacattagctgggggtagtggcggccgcctgtaatcccggctactcaggaggctgaggc-agagaattgcttgaacccgggaggcagaggttgcaatgagcagagacggagccactacactccagcctgggctac-agagcaagattccgtc s panTro4.chr19 59860674 267 + 63644993 gtctcatgcttgtaatcccggcactttgggaggccaaggtgggtggatcacttgaggtcaggagttcaagaccagcctggccaagatagtgaaaccccatctctactaaaaatacaaaacattagctgggggtagtggcggccgcctgtaatcccagctactcaggaggctgaggc-agagaattgcttgaacccgggaggcggaggttgcaatgagcagagacggagccactgcactccagcctgggctac-agagcaagattccatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771806 267 + 60714840 ggctcatgcttgtaatcccagcactttgggaggccgaggtgggtggatcacttgagatcaggagttccagaccagcctggccaagatagtgaaatcccatctctactaaaaatacaaaacattagctgggggtagtggcgggcgcctgtaatcccagctactcaggaggctgaggc-agagaattgcttgaacccgggaggcggaggttgcaatgagcaaagacggagccactgcactccagcctgggctac-agagcaagattccgtc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306523 266 - 106955855 ggctcatgcttgtaatcccagcactttgggaggccgaggtgggtggatcacttaaggtcagaagttcaagaccagcctggccaagatagtgaaatcccatctctactaaaaatac-aaacattagctgggggtagcggcgggcgcctgtaatcccagctactcaggaggctgagtc-acagaattgcttgaacccaggaggcggaggttgcaatgagcagagacggagccactgcactccagcctgggctac-agagcaagatcccgtc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60597575 267 + 64156825 ggctcacgcctgtaatcccagcacttcgggaggccgaggtgggtggatcacttgaggtcaggagttcaagaccaacctggccaagatagtgaaaccccgtctctaccaaaaatacaaaacattagctgggggtagtggcgggcgcctgtaatcccagctactcaagaggctgaggc-agagaattgcttgaacccgggaggcggaggttgcaatgagcagagatggaaccactgcacgccagcctgggggac-agagcaagattccgtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737854 267 + 59248254 ggctcacgcctgtaatcccagcactttgggaggccaaggtgggtggatcacttgaggtcaggagttcaagaccaacctggccaagatagtgaaaccccgtctctactaaaaatacaaaacattagctgggggtagtggcgggcccctgtaatcccagctactcaagaggctgaggc-agagaattgcttgaacccgggaggcggaggttgcaatgagcagagatggaaccactgcacgccagcctgggggac-agagcaagattccgtc i macFas5.chr19 I 541 C 0 s papAnu2.chr19 47842856 267 + 51301725 ggctcacgcctgtaatcccagcacttcaggaggccgaggtgggtggatcacttgaggtcaggagttcaaaaccaacctggccaagatagtgaaaccccgtctctactaaaaatacaaaacattagctgggggtagtggcgggcgcctgtaatcccagctactcaagaggctgaggc-agagaattgcttgaacccgggaggtgggggttgcaatgagcagagatggaaccactgcactccagcctgggggac-agagcaagattctgtc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552347 267 + 50890351 ggctcacgcctgtaatcccagcacttcgggaggcccaggtgggtggatcacttgaggtcaggagttcaagaccaacctggccaagatagtgaaaccccgtctctactaaaaatacaaaacattagctgggggtagtggcgggcacctgtaatgccagctactcaagaggctgaggc-agagaattgcttgaagccgggaggtagaggttgcaataagcagagatggaaccactgcactccagcctgggagac-agagcaagattctgtc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3237883 267 - 49145316 ggctcacgccgataatcccagcactttgggaggctgaggcgggtggatcac--gaggtcaagagattgagaccatcctggttgacatggtgaaaccccgtctctactaaacatacaaaaaattagctgggcacggtggcgcatgcctgtaatcccagctactcaggaggctgaggcgggagaatcgcctgaacccaggaggcggaggttgcggtgagccgagatcgcgccattgcactccagcctgggtgacaagagcgaaactccgtc i calJac3.chr22 C 0 C 0 e canFam3.chr1 102633585 30 + 122678785 I a score=2101.000000 s hg38.chr19_GL949747v2_alt 586026 3 + 729520 tc----------a s panTro4.chr19 59860941 3 + 63644993 tc----------a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772073 3 + 60714840 tc----------a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306789 3 - 106955855 tc----------a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60597842 3 + 64156825 tc----------a i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55738121 3 + 59248254 tc----------a i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47843123 2 + 51301725 tc----------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552614 13 + 50890351 tcaaaaaaagaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3238150 3 - 49145316 tc----------a i calJac3.chr22 C 0 T 27878 s canFam3.chr1 102633615 3 + 122678785 TC----------A i canFam3.chr1 I 30 C 0 a score=575906.000000 s hg38.chr19_GL949747v2_alt 586029 204 + 729520 ----aaaaaaaaaaaaaC--TACCAGAAATGAATAAAACCAGGAAGAAGTGATGCACCTTGCATGCTCTCAAACACCAAACTCAT----GACCATAGGACCGTATTTACCCACCTGGCTTTGCTAACTCCGAGTCTTCTTCTGCATCTCCCAGCTCAGGATTATCTATTTCTTGCACCTGTCCGTCCTCTGTAAAATAC---TTAGATGTAAGCCTG s panTro4.chr19 59860944 201 + 63644993 ----aaaaaaaaaaaa-----gccagaaatgaataaaaCCAGGAAGAAGTGATGCACCTTGCACGCTCTCAAACACCAAACTCAT----GACCACAGGACCGTATTTACCCACCTGGCTTTGCTAACTCCGAGTCTTCTTCTGCATCTCCCAGCTCAGGATTATCTATTTCTTGCACCTGTCCGTCCTCTGTAAAATAC---TTAGATGTAAGCCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772076 200 + 60714840 ----aaaaaaaaaGTA------CCAGAAATGAATAAAACCAGGAAGAAGTGATGCACCTTGCACGCTCTCAAACATCAAACTCAT----GACCACAGGACTGTATTTACCCACCTGGCTTTGCTAACTCCGAGTCTTCTTCTGCATCTTCCAGCTCAGGATTATCTGTTTCTTGCACCTGTCCATACTCTGTAAAATAC---TTAGATGTAAGCCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306792 195 - 106955855 ----aaaaaaaaaaaG----TACCAGAAATGAAGAAAACCAGGAAGAAGTGATGCACCT-------TCTCAAACACCCAACTCAT----GACCACAGGACCGTATTTACCCACCTGGCTTTGCTAACTCCGAGTCTTCTTCTGCATCTCCCAGCTGAGGATTATCTATTTCTTGCACCTGTCCGTCCTCTGTAAAATAC---TTAGACGTAAGCCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60597845 206 + 64156825 ----aaaaaaaaaaaaaaaaTACCAGAAATGAAGAAAACCAGGAAGAAGTGATGCACCTTGCACGCTCTCAAACACCACACTCAT----GACCACAAGACCGTATTTACCCACCTGGCTTTGCTAACTCTGAGTCTTCTTCTGCATCTCCCAGCTGAGGGTTATCTATTTCTTGCACCTGTCCGGCCTCTGTAAAATAC---TTAGATGTAAGCCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55738124 206 + 59248254 ----aaaaaaaaaaaaaaaaaaCCAGAAATGAAGAAAACCAGGAAGAAGTGATGCACCTTGCACGCTCTCAAACACCACACTCAT----GACCACAAGACCGTATTTACCCACCTGGCTTTGCTAACTCTGAGTCTTCTTCTGCATCTCCCAGCTGAGGGTTATCTATTTCTTGCACCTGTCCGGCCTCTGTAAAATAC---TTAGATGTAAGCCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47843125 206 + 51301725 ----aaaaaaaaaaaaaaaataccagaaatgaagaaaaccaggaagaaatgatGCACCTTGCACGCTCTCAAACACCACACTCAT----GACCACACGACCGTATTTACCCACCTGGCTTTGCTAACTCTGAGTCTTCTTCTGCATCTCCCAGCTGAGGGTTATCTATTTCTTGCACCTGTCCGGCCTCTGTAAAATAC---TTAGATGTAAGCCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552627 206 + 50890351 ----aaaaaaaaaaaaaaaGTACCAGAAATGAAGAAAACCAGGAAGAAGTGATGCACCTTGCACGCTCTCAAACACCACACTCAT----GACCACACGACCATATTTACCCACCTGGCTTCACTAACTCTGAGTAGTCTTCTGCATCTCCCAGCTGAGGGTTATCTATTTCTTGCACCTGTCCGGCCTCTGTAAAATAC---TTAGATGTAAGCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45906522 196 + 49145316 ------AAGAAAACACGAATCACT--AAATGAAGAAAACCAGGAAGAAGTGATGCGCCTTGCACCTTCCCAAACGCCGAAGTCGC----GACGAGAC-----TGTTCACCCACCTGGCTTTGCTGACTCCAAGTCTTCTTCTAAGTCTCCCAGCTCAGGGTTATCTACTTCTTCCATCTGTCTGTCCTCTGTAAAATAC---ACAGACG-GAGCCTG i calJac3.chr22 I 1893 T 1914 s canFam3.chr1 102633618 203 + 122678785 TTAGGAAAAAAAAATACCTGTGTCAAGTAAGAACATGATAATAGAGAAGTTATCAA------GAACTACCTGACACTAAGCTCATCCAGGAAGATAGGA-------TACAGACCTGGCTTTTCTCCTTTCAAACCTTCCTTTGCTTCTTCTGGATTTGTGACATCTTCTTCCTGTACTTGTGTAAATGCTGCAAAATACAAATTAAA-GTGAGCATG i canFam3.chr1 C 0 C 0 a score=94449.000000 s hg38.chr19_GL949747v2_alt 586233 31 + 729520 ACACAGTAATTTACACTTCGTAAATCAGACA s panTro4.chr19 59861145 31 + 63644993 ACACAGTAATTTACACTTCGTAAATCAGACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772276 31 + 60714840 ACACAGTAATTTACACTTCGTAAATCAGACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306987 31 - 106955855 ACACAGTAATTTACACTTCGTAAATCAGACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60598051 31 + 64156825 ACACAGCAATTTGCACTGCGTAAATCAGACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55738330 31 + 59248254 ACACAGTAATTTGCACTGCGTAAATCAGACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47843331 31 + 51301725 ACACAGCAATTTGCACTGCGTAAATCAgaca i papAnu2.chr19 C 0 I 540 s chlSab2.chr6 47552833 31 + 50890351 ACACAGCAATTTGCACTGCGTAAATCAGACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904804 31 + 49145316 TCATGGTCATTTGTACTTCCTGAATCAGGCA i calJac3.chr22 T 1914 C 0 s canFam3.chr1 102633821 31 + 122678785 ACACAAAAATGTGAATTTCTTTTATCAGAGA i canFam3.chr1 C 0 C 0 a score=4095.000000 s hg38.chr19_GL949747v2_alt 586264 1 + 729520 T s panTro4.chr19 59861176 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772307 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103307018 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60598082 1 + 64156825 T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55738361 1 + 59248254 T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47843902 1 + 51301725 T i papAnu2.chr19 I 540 C 0 s chlSab2.chr6 47552864 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904835 1 + 49145316 T i calJac3.chr22 C 0 C 0 s canFam3.chr1 102633852 1 + 122678785 T i canFam3.chr1 C 0 I 3195 a score=49715.000000 s hg38.chr19_GL949747v2_alt 586265 19 + 729520 TATTGTACATAAAGTGTCA s panTro4.chr19 59861177 19 + 63644993 TATTGTACATAAAGTGTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772308 19 + 60714840 TATTGTACATAAAGTGTCa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103307019 19 - 106955855 TATTGTACATAAAGCGTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60598083 19 + 64156825 TATTATGCATAAAGTGTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55738362 19 + 59248254 TATTATACATAAAGTGTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47843903 19 + 51301725 TATTATACATAAAGTGTca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552865 19 + 50890351 TATTATACATAAAGTGTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904836 19 + 49145316 TGTAGAAAAGAAAGCATCA i calJac3.chr22 C 0 I 4633 e canFam3.chr1 102633853 3195 + 122678785 I a score=565980.000000 s hg38.chr19_GL949747v2_alt 586284 261 + 729520 gccaggcatggtggctcatgcctgtaatcacagcactttggaaggctgaggtgggcggatcacaaggtcaggagatcaagaccagcctggccaacatggcaaaaccccatctctactaaaaatac-----aaaaaaaaa-aaaattagccaggtgtggtgaaacacgcctgtaatcccagctactccggaggctgagataggagaatcacttgaacccagaggcggaggttgcagtgagcccagatctcgccactgcactccagcct s panTro4.chr19 59861196 260 + 63644993 gccaggcatggtggctcatgcctgtaatcacagcactttggaaggctgaggtgggcagatcacaaggtcaggagatcaagaccagcctggccaacatggcaaaaccccatctctactaaaaatac------aaaaaaaa-aaaattagccaggtgtggtggaacacgcctgtaatcccagctactccggaggctgagataggagaatcacttgaacccagaggcgtaggttgcagtgagcccagatctcaccactgcactccagcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772327 247 + 60714840 gccaggcatggtggctcacgcctgtaatcacagcactttggaaggctgaggtgggcggatcacaaggtcaggacatcaagaccagcctggccaacatggcaaaaccccatctctactaaaaatac-------aaaaaaa-aaaattagccaagtgtggtggcacacgcctgtaatcccagctactccagaggctgagataggagaatcactt-aacccagaggcagaggttgcagtgagcacagatctcaccactg----------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103307038 247 - 106955855 gccaggcatggtggctcacgcctgtaatcacagcactttggaaggctgaggtgggtggatcacaaggtcaggagatcaagaccagcctggccaacatggcaaaaccccatctctactaaaaatac-------aaaaaaa-aaaattagccaggtgtggtggcacacacctgtaat-ccagctactcgggaggctgagataggaaagtcgcttgaacccagaggcggaggttgcagtgagcccagatctcaccactg----------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60598102 266 + 64156825 gctgggcgtggcggctcacgcctgtaatcccagcactttgagaggctgaggtgggcaaatcacaaggtcaggagctcaagatcagcctggccaatgtggcaaaaccccatctctactaaaaataccaaaaaaaaaaaaa-aaaattagccaggtatgatggcacaggcctgtaatcccagctactcgggaggctgagataggagaatcacttgaacctggaggcggaggttgcagtgagccaagatctcaccactgcactccagcct i rheMac3.chr19 C 0 I 1440 s macFas5.chr19 55738381 252 + 59248254 gccgggcgtggcggctcacgcctgtaatcccagcactttgagaggctgaggtgggcaaatcacaaggtcaggagctcaagaccagcctggccaatgtggcaaaaccccatctctactaaaaatacc---aaaaaaaaaa-aaaattagccaggtatgatggcacaggcctgtaatcccagctactcgggaggctgagataggagaatcacttgaacctggaggcggaggttgcagtgagccaagatctcaccactg----------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47843922 256 + 51301725 gccgggcgcggcggctcacgcctgtaatcccaacactttggaaggctgaggtgggcagatcacaaggtcaggaactcaagaccagcctggccaacatggcaaaaccccatctctactaaaaataccaaaaaaaaaaaaataaaaaaagccaggtatgatggcacaggcctgtaatcccagctactcgggaggccgagatagaagaatcacttgaacctggaggcggaggttgcagtgagccaagatctcaccactg----------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552884 262 + 50890351 gccaggcgcggcggctcatgcctgtaatcccagcactttgggaggctgaggtgggcaaatcacaaggtcaggagctcaagaccagcctggccaatgtggcaaaaccccatctctactaaaaatacc----aaaaaaaaa-aaaattagccaggtatgatggcacaggcctgtaatcccagctactcgggaggctgagatagaagaatcacttgaacctggaggcggaggttgcagtgagccaagatctcaccactgcactccagcct i chlSab2.chr6 C 0 I 1475 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I a score=50840.000000 s hg38.chr19_GL949747v2_alt 586545 46 + 729520 tacactccagcctgggcgacagaacgagactccatctcaaaaaaaa s panTro4.chr19 59861456 40 + 63644993 tacactccagcctgggcgacagagcgagactccatctc------aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772574 44 + 60714840 --cactccagcctgggcgacagagcgagactccatctcaaaaaaaa i ponAbe2.chr19 C 0 I 2071 s nomLeu3.chr10 103307285 44 - 106955855 --cactccagcctgggcgacagagcgagactccatctcaaaagaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55738633 44 + 59248254 --cactccagcctgagtgacagagcgagactctgtctcaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47844178 44 + 51301725 --cactccagcctgggcaacagagtgagaccctgtctcaaaaaaaa i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I e chlSab2.chr6 47553146 1475 + 50890351 I e rheMac3.chr19 60598368 1440 + 64156825 I a score=1365.000000 s hg38.chr19_GL949747v2_alt 586591 1 + 729520 a s panTro4.chr19 59861496 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774689 1 + 60714840 a i ponAbe2.chr19 I 2071 C 0 s nomLeu3.chr10 103307329 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55738677 1 + 59248254 a i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47844222 1 + 51301725 a i papAnu2.chr19 C 0 I 1452 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I e chlSab2.chr6 47553146 1475 + 50890351 I e rheMac3.chr19 60598368 1440 + 64156825 I a score=1820.000000 s hg38.chr19_GL949747v2_alt 586592 2 + 729520 aa s panTro4.chr19 59861497 2 + 63644993 aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774690 2 + 60714840 aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103307330 2 - 106955855 aa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55738678 2 + 59248254 aa i macFas5.chr19 C 0 I 1404 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I e chlSab2.chr6 47553146 1475 + 50890351 I e papAnu2.chr19 47844223 1452 + 51301725 I e rheMac3.chr19 60598368 1440 + 64156825 I a score=2115.000000 s hg38.chr19_GL949747v2_alt 586594 5 + 729520 aaaaa s panTro4.chr19 59861499 5 + 63644993 aaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774692 5 + 60714840 acaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103307332 5 - 106955855 aaaaa i nomLeu3.chr10 C 0 I 1724 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I e chlSab2.chr6 47553146 1475 + 50890351 I e papAnu2.chr19 47844223 1452 + 51301725 I e macFas5.chr19 55738680 1404 + 59248254 I e rheMac3.chr19 60598368 1440 + 64156825 I a score=1228.000000 s hg38.chr19_GL949747v2_alt 586599 6 + 729520 aaaaaa s panTro4.chr19 59861504 6 + 63644993 aaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774697 6 + 60714840 acaaaa i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I e nomLeu3.chr10 103307337 1724 - 106955855 I e chlSab2.chr6 47553146 1475 + 50890351 I e papAnu2.chr19 47844223 1452 + 51301725 I e macFas5.chr19 55738680 1404 + 59248254 I e rheMac3.chr19 60598368 1440 + 64156825 I a score=15540.000000 s hg38.chr19_GL949747v2_alt 586605 6 + 729520 aaaTGA s panTro4.chr19 59861510 6 + 63644993 aaaTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774703 6 + 60714840 aaaTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309061 6 - 106955855 AAATGA i nomLeu3.chr10 I 1724 C 0 s rheMac3.chr19 60599808 6 + 64156825 AAATGA i rheMac3.chr19 I 1440 C 0 s macFas5.chr19 55740084 6 + 59248254 AAATGA i macFas5.chr19 I 1404 C 0 s papAnu2.chr19 47845675 6 + 51301725 AAATGA i papAnu2.chr19 I 1452 C 0 s chlSab2.chr6 47554621 6 + 50890351 AAATGA i chlSab2.chr6 I 1475 C 0 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I a score=19904.000000 s hg38.chr19_GL949747v2_alt 586611 6 + 729520 CCAGGA s panTro4.chr19 59861516 6 + 63644993 CCAGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774709 6 + 60714840 CCAGGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309067 6 - 106955855 CCAGGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60599814 6 + 64156825 CCAGGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55740090 6 + 59248254 CCAGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47845681 6 + 51301725 CCAGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47554627 6 + 50890351 CCAGGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102637048 6 + 122678785 CTAGGA i canFam3.chr1 I 3195 C 0 e calJac3.chr22 45904855 4633 + 49145316 I a score=1077798.000000 s hg38.chr19_GL949747v2_alt 586617 346 + 729520 CACC-------CCAGGTTCTACTTACCCATCATCTCAGCCTTTGCCATCTTACACAATTCCGTGAGATTCATCTCTTCCAAGATGTTCACAGTCGCATTCCTTATCCAATTTTCTGAGGAGGTGTTGACCAGAATTTCTGCCAGTTTCTTGCCATCAGCCTCTTCCACCTCAGACCATGGGGTCTTCTGTAGCACGTCTTCGAGGGGAAAAGCCCATAAAAGGGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGAGTCCACTCTAGCTGGGGCGATG---TCATAGTGCTCCGAGTATGAGACCTTAGGTTAAGGC--TGAAGA--ACTG-GGGGGAAA s panTro4.chr19 59861522 346 + 63644993 CACC-------CCAGGTTCTACTTACCCATCATCTCAGCCTTTGCCATCTTACACAATTCCGTGAGATTCATCTCTTCCAAGATGTTCACAGTCGCATTCCTTATCCAATTTTCTGAGGAGGTGTTGACCAGAATTTCTGCCAGTTTCTTGCCATCAGCCTCTTCCACCTCAGACCATGGGGTCTTCTGTAGCACGTCTTCGAGGGGAAAAGCCCATAAAAGGGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGAGTCCACTCTAGCTGGGGCGATG---TCATAGTGCTCCGAGTATGAGACCTTAGGTTAAGGC--TGAAGA--ACTG-GAGGGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774715 346 + 60714840 CACC-------CCAGCTTCTACTTACCCATCATCTCAGCCTTTGCCATCTTACACAATTCCATGAGATTCATCTCTTCCAAGATGTTCACAGTCGCATTCCTTATCCAATTTTCTGAGGAGGTGTTGACCAGAATTTCTGCCAGTTTCTTGCCATCGGCCTCTTCCACCTCAGACCATGGGGTCTTCTGTAGCACGTCTTCGAGGGGAAGAGCCCATAAGAGGGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGAGTCCACTCTAGCTGGGGCGATG---TCATAGTGCTCCAAGTATGAGACCTTAGGTTAAGGC--TGAAGA--ACTG-GGGGGAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309073 347 - 106955855 CACC-------CCAGGTTCTACTTACCCAGCATCTCAGCCTTTGCCATCTTACACAATTCCGTGAGATTCATCTCTTCCAAGATGTTCACAGTTGCATTCCTTATCCAATTTTCTGAGGAGGTGTTGACCAGAATTTCTGCCAGTTTCTTGCCATCAGCTTCTTCCACCTCAGACCATGGGGTCTTCTGTAGCACGTCTTCCAGGGGGAGAGCCCATAAAAGGGATTTGAAACTCTTTAATTCATCCTCATTCAGCTGCTCCAGAAGGGTCTCCAGAGTCCACTGTAGCTGGGTTGCCA---TCATAGTGCTCCAAGTATGAGACCTCAGGTTAAGGC--TGAAGA--ACTGCGGGGGAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60599820 345 + 64156825 CACC-------CCAGGTTCTACTTACCCAGCATCTCAGACTTTGCCATCTTACACAATTCTGTGAGGTTCATCTCTTCCAAGACAGTCACAGTTGCACTCCTTATCCAATTTTCTGAGGACGTGTGGATTAGAATTTCTGCCAGCTTCTTGCTGTCAGCCTCTTCCACCTCAGACCATGGGGCCTTCTGCAGCACATCTTCCAGGGGAAGAGCCCTTAAGAGGGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGCGTCCACTCGAGCTGTGGCGATG---TCATAGTGCTCCACGTATGAGACCTTAGGTTAAGGC--TAAAGA--ACTG-GGAGAAA- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55740096 345 + 59248254 CACC-------CCAGGTTCTACTTACCCAGCATCTCAGACTTTGCCATCTTACACAATTCTGTGAGGTTCATCTCTTCCAAGACAGTCACAGTTGCACTCCTTATCCAATTTTCTGAGGACGTGTGGATTAGAATTTCTGCCAGCTTCTTGCCGTCAGCCTCTTCCACCTCAGACCATGGGGCCTTCTGCAGCACGTCTTCCAGGGGAAGAGCCCTTAAGAGGGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGCGTCCACTCGAGCTGTGGCGATG---TCATAGTGCTCCACGTATGAGACCTTAGGTTAAGGC--TGAAGA--ACTG-GGAGAAA- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47845687 345 + 51301725 CACC-------GCAGGTTCTACTTACCCAGCATCTCAGCCTTTGCCATCTTACACAATTCTGTGAGGTTCATCTCTTCCAAGACAGTCACAGTTGCACTCCTTATCCAATTTTCTGAGGACGTGTGGATTAGAATTTCTGCCAGCTTCTTGCCGTCAGCCTCTTCCACCTCAGACCACCGGGTCTGCTGCAGCACGTCTTCCAGGGGAAGAGCCCTTAAGAGGGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGCGTCCACTCGAGCTGTGGCGATG---TCATAGTGCTCCACGTATGAGACCTTAGGTTAAGGC--TGAAGA--actg-ggagaaa- i papAnu2.chr19 C 0 I 314 s chlSab2.chr6 47554633 345 + 50890351 CACC-------CCAGGTTCTACTTACCCAGCATCTCAGACTTTGCCATCTTACACAATTCCATGAGGTTCATCTCTTCCAAGACAGTCACAGTTGCACTCCTTATCCAATTTTCTGAGGATGTGTTGATTAGAATTTCTGCCAGCTTCTTGCCATCAGCCTCTTCCACCTCAGACCACGGGGTCTTCTGCAGCACGTCTTCGAGGGGAAGAGCCCTTAAGAGCGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGCGTCCACTCGAGCTGTGGCGATG---TCATAGTGCTCCACGTATGAGACCTTAGGTTAAGGC--TGAAGA--ACTG-GGAGAAA- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45909488 346 + 49145316 CATT-------CCGTGTTCTGCTCACCCAGCAACTCCACCTTTGCCATCTCAGACAATTCGGGGAGATTCAGCTCTTCGAAGACCTTCACAGTCGCGTTCCTTATCCAGCATTCTGAGGATGTGTTGACCAGAATTTCTGCCAGTTTCCTGCCGTTGGCTTCTTCCACCTCCGACCACGGGGTCTTCTGTAGCACATCTTCTAGGGGAAAAGCCCTCAAGATGGACTTGAAAGTCCCCAATTCACCCTCGCTCAGCTGCTCCAGAAGGGTCTGCAGAGTGTACTGCAGCTGTGGTAATG---TCATGGTGCTCCACGTGTGACAGCTTAGGTCAAGGC--CAAAGA--TCTA-GGGGAAAA i calJac3.chr22 I 4633 C 0 s canFam3.chr1 102637054 359 + 122678785 CACCATGTGGGCTTGTTTCTACTTACCCCTGAGCTCATCCTTTGCTCTCTCAGACAGATCGGTTCGGTTCATCTTGTCAAAAATCTGGATGGTCACCATCTCTACCCAGTGGCTGGGGCAGTGGTTGATAAGAATTTCTGCCAGCTGCTTCCCATCGGCCTCCTCTACCTCTGTCGCAGGGATGTGCTGTAATTCATCTTGTAGGGAAAGGGGCCTCAACAGAGACTTGAACTGGCTCAGCTCATCCTGGGCAAACTGTTCTAGAAGGGGCTGCAGGTTGAAACCCAGCTGTGCAGAAGGTTCCATCTTGTTCTACATGAGAGATCTGAGCTTTGGGCATTAAAGAAGAATA-AGGGAAG- i canFam3.chr1 C 0 C 0 a score=42929.000000 s hg38.chr19_GL949747v2_alt 586963 17 + 729520 AAAGGAAAAACAGTTCA s panTro4.chr19 59861868 17 + 63644993 AAAGAAAAAACAGTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56775061 17 + 60714840 AAAGAAAAAACAGTTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309420 17 - 106955855 AAAGAAAACACAGTTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60600165 17 + 64156825 AAAGAAACAACAGTTCA i rheMac3.chr19 C 0 I 480 s macFas5.chr19 55740441 17 + 59248254 AAAGAAACAACAGTTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47846346 17 + 51301725 aaagaaaaaacaattca i papAnu2.chr19 I 314 C 0 s chlSab2.chr6 47554978 17 + 50890351 AAAGAAACAACAGTTCA i chlSab2.chr6 C 0 I 318 s calJac3.chr22 45909834 13 + 49145316 ----AAGGAACAGTTCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102637413 13 + 122678785 AAATGAAAGAGAG---- i canFam3.chr1 C 0 C 0 a score=1219.000000 s hg38.chr19_GL949747v2_alt 586980 1 + 729520 C s panTro4.chr19 59861885 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56775078 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309437 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55740458 1 + 59248254 T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47846363 1 + 51301725 t i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45909847 1 + 49145316 C i calJac3.chr22 C 0 C 0 s canFam3.chr1 102637426 1 + 122678785 C i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47554995 318 + 50890351 I e rheMac3.chr19 60600182 480 + 64156825 I a score=4435.000000 s hg38.chr19_GL949747v2_alt 586981 2 + 729520 GA s panTro4.chr19 59861886 2 + 63644993 GA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56775079 2 + 60714840 GA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309438 2 - 106955855 CA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60600662 2 + 64156825 GA i rheMac3.chr19 I 480 C 0 s macFas5.chr19 55740459 2 + 59248254 gg i macFas5.chr19 C 0 I 598 s papAnu2.chr19 47846364 2 + 51301725 gA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47555313 2 + 50890351 GA i chlSab2.chr6 I 318 C 0 s calJac3.chr22 45909848 2 + 49145316 AA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102637427 2 + 122678785 GA i canFam3.chr1 C 0 C 0 a score=174733.000000 s hg38.chr19_GL949747v2_alt 586983 65 + 729520 GTTACCATCATTAAATGAAACCACAGTTTCCTGTGTGCCAAGAACAAGA-----CTGTTCCTGCTGTACA s panTro4.chr19 59861888 65 + 63644993 GTTACCATCATTAAATGAAACCACAGTTTCCTGTGTGCCAAGAACAAGA-----CTGTTCCTGCTGTACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56775081 63 + 60714840 GTTACCATCATTAAATGAAAC--CAGTTTCCTATGTACCAAGAACAAGA-----CTGTTCCTGCTGCACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309440 65 - 106955855 GTTACCATCATTAAATGAAACCACAGTTGCCTATGTGCCAAGAACAAGA-----CTGTCCCTGCAGCACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60600664 65 + 64156825 GTTACCATCATTAAATGAAACAACAGCTGCCTATGTGCTGAGAATGAGA-----CTGTTCCCGCTGCACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55741059 65 + 59248254 GTTACCATCATTAAATGAAACAACAGCTGCCTATGTGCTGAGAATGAGA-----CTGTTCCCGCTGCACC i macFas5.chr19 I 598 C 0 s papAnu2.chr19 47846366 70 + 51301725 GTTACCATCATTAAATGAAACAACAGCTGCCTGTGTGGCGAGAATGAGACTGTTCTGTTCCCGCTGCACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47555315 65 + 50890351 GTTACCATCATTAAATGAAACAACAGCTGCCTGTGTGCCGAGAATGAGA-----CTGTTACCGCTGCACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45909850 61 + 49145316 GTTACCATCATTCAATGAAA--ACAGTGGCCTGTGTGCCGAGAACAA-------CTGTCCGTGCCGTACC i calJac3.chr22 C 0 C 0 s canFam3.chr1 102637429 65 + 122678785 ATCAGTATTCCTACTTCAAATGACAGTTGCCTCTGTGCCAAGAACTGGG-----CAATTATCACTGCCCA i canFam3.chr1 C 0 n 0 a score=93711.000000 s hg38.chr19_GL949747v2_alt 587048 39 + 729520 GTGAGTGGTAAAATATTCCAAAGACTGAATTAAGAGACT s panTro4.chr19 59861953 39 + 63644993 GCGAGTGGTAAAATATTCCATAGACTGAATTAAGAGACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56775144 39 + 60714840 ATAAGTGGTAAAATATTACATAGACTGAATTAAGAGACG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309505 39 - 106955855 ATGAGTGGTAAAATATTATGTAGACTGAATTAAGAGACG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60600729 39 + 64156825 AGGAGTGCTAAAATATTACGTAGACTGAATTAAGAGACG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55741124 39 + 59248254 AGGAGTGCTAAAATATTACGTAGACTGAATTAAGAGACG i macFas5.chr19 C 0 T 568 s papAnu2.chr19 47846436 39 + 51301725 AGGAGTGCTAAAATATCACGTAGACTGAATTAAGAGACG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47555380 39 + 50890351 AGAAGTGCTAAAATATTACATAGACTGAATTAAGAGACG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45909911 38 + 49145316 CTGAGTGGTGAAACGTGAGGTAGACCGAATTAAGAGAT- i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I a score=96484.000000 s hg38.chr19_GL949747v2_alt 587087 34 + 729520 GAAAATCTGGCCCAGCACggtggctcacgcctgc s panTro4.chr19 59861992 34 + 63644993 GAAAATCTggcccagcacggtggctcatgcctgc i panTro4.chr19 C 0 I 42 s ponAbe2.chr19 56775183 34 + 60714840 GAAAATCTGgcccagcacggtggctcatgcctgc i ponAbe2.chr19 C 0 I 42 s nomLeu3.chr10 103309544 34 - 106955855 GAAAATCTGACCCAgcacagtggctcatgcctgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60600768 34 + 64156825 GAAAATCTggcccagcacagtggctcatgcctgc i rheMac3.chr19 C 0 I 1826 s macFas5.chr19 55740595 34 + 59248254 aaaaaattagccgggcgcggtggctcacgcctgt i macFas5.chr19 T 568 I 40 s papAnu2.chr19 47846475 34 + 51301725 GAAAAtctggcccagcacagtggctcatgcctgc i papAnu2.chr19 C 0 I 42 s chlSab2.chr6 47555419 34 + 50890351 GAAAATCTggcccagcacagtggctcatgcctgc i chlSab2.chr6 C 0 I 1731 s calJac3.chr22 45909949 34 + 49145316 GGAAATCTggctgggcgcggtggctcacgcctgt i calJac3.chr22 C 0 I 42 e canFam3.chr1 102637494 0 + 122678785 I a score=36953.000000 s hg38.chr19_GL949747v2_alt 587121 52 + 729520 ggccaggagttcgagacc-------agcctggctaacttggtaaaa-----------AGAACGAACAAAA s panTro4.chr19 59862068 52 + 63644993 ggccaggagttcgagacc-------agcctggctaacttggtaaaa-----------AGAACGAACAAAA i panTro4.chr19 I 42 C 0 s ponAbe2.chr19 56775259 52 + 60714840 ggccaggagttcgagacc-------agcctggctaacttggtaaaa-----------AGAACGAACAAAA i ponAbe2.chr19 I 42 C 0 s macFas5.chr19 55740669 54 + 59248254 ggtcaggagatcgagaccatggtgaaaccccgtttctactaaaaat-----------agaaaaaa----- i macFas5.chr19 I 40 I 2 s papAnu2.chr19 47846551 52 + 51301725 ggccaggagttcaagacc-------agcctggctaacgtggtaaaA-----------AGAacgaaccaaa i papAnu2.chr19 I 42 I 597 s calJac3.chr22 45910025 62 + 49145316 ggtcgggagtttgagacc-------agcctggccaacatggcaaaaccgtccctactaaaactacaaaa- i calJac3.chr22 I 42 I 2 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103309578 0 - 106955855 C e chlSab2.chr6 47555453 1731 + 50890351 I e rheMac3.chr19 60600802 1826 + 64156825 I a score=27420.000000 s hg38.chr19_GL949747v2_alt 587173 39 + 729520 ggctgggcacggtggctcacgcctgtaatcccagcactt s panTro4.chr19 59862120 39 + 63644993 ggccgggcacggtggctcacgcctgtaatcccagcactt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56775311 39 + 60714840 ggccgggcacggtggctcatgcctgtaatcccagcactt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309578 13 - 106955855 --------------------------aatctcagcactt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55740725 39 + 59248254 agctgggcgcagtggcgggcgcctgtagtcccagctact i macFas5.chr19 I 2 C 0 s calJac3.chr22 45910089 39 + 49145316 agccggacatggtggcccatgcctgtaatcccagctact i calJac3.chr22 I 2 C 0 e canFam3.chr1 102637494 0 + 122678785 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47846603 597 + 51301725 I e rheMac3.chr19 60600802 1826 + 64156825 I a score=132689.000000 s hg38.chr19_GL949747v2_alt 587212 262 + 729520 tgggaggccgaggcggatggat--cacgatatcaggagatcgaga-------------------------------ccatcctggctaac-acagtgaaacccctgcctctact-aaaaaaatacaaaaaattagcagggcgtggtggcgggcacctgtagtccc-------------------------------------------------------------------------------------------agctactcgggaggctgaggcaggagaatggtgtgaacccgggaagtggagcttgcagtgagcagagatctcaccattgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaaaaaa s ponAbe2.chr19 56775350 262 + 60714840 tgggaggccgaggcgggtggat--cacgatgtcaggagatcgaga-------------------------------ccatcctggctaac-acagtgaaacacctgtctctact-aaaaaaatacaaaaaattagccgggcatggtggcgggcacctgtagtccc-------------------------------------------------------------------------------------------agctactcgggaggctgaggcaggagaatggtgggaacccgggaggcggagcttgcagtgagctgagatagcgacactgcactccagcctgggtgacagagcgaaactcggtctcaaaaaaaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309591 263 - 106955855 tgggaggctgaggcaggcggat--cacaaggtcaggagatggaga-------------------------------ccgtcctggctaac-acagtgaaacccccgcctctactaaaaaaaatacaaaaaattagccaggcgtagtggcaggcacctgtagtccc-------------------------------------------------------------------------------------------agctactcaggtggctgaggcaggagaatggtgtgaacacgggaggcggagcttgcagtgagcagagatcgcgccattgcactccagcctgggcaacagagccagactccatctcaaaaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55740764 274 + 59248254 cgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggtgac-agagcaagactcc-gtctca----aaaaaaaaaaaaaaaattagccgggcgtggtggcgggcgcctgtagtccc-------------------------------------------------------------------------------------------agctactcaggagactgaggcaggagaatggcgtgaaacc-----------------ctgagccgagattgcaccactgcactccagcctgggcgacagagccagactccgtctcaaaaaaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s calJac3.chr22 45910128 366 + 49145316 tgggaggctgagacaggagaatcgctccaacccaggaggtggaggttgcagtgagccactatact-----------ccagcctgggcaacaagagcgtaactcc-atctc-----aaaaa-----aaaaaaaTGTCAgggcacggtggcccacacctgtaatcccatcactttagtagactgaggtgggtggatcactggagtctggggagttagagaccagcctgagcaacaaggcaaaaccctgtctctactctagctacttggggggctgaggcaggaggatttcttgtgcccagaaagttgaggctgcagtgaggcaagatcacagcactgcattccagcctgagtgacaaggtgagactctgcctcaaaaaaaaaaaaaaaaa i calJac3.chr22 C 0 I 372 e canFam3.chr1 102637494 0 + 122678785 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47846603 597 + 51301725 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=1998.000000 s hg38.chr19_GL949747v2_alt 587474 5 + 729520 aaaaa s ponAbe2.chr19 56775612 5 + 60714840 aaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309854 5 - 106955855 aaaaa i nomLeu3.chr10 C 0 I 18 s macFas5.chr19 55741038 5 + 59248254 gaaag i macFas5.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910494 372 + 49145316 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47846603 597 + 51301725 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=1403.000000 s hg38.chr19_GL949747v2_alt 587479 6 + 729520 aaaaga s nomLeu3.chr10 103309877 6 - 106955855 AAAAGA i nomLeu3.chr10 I 18 C 0 s macFas5.chr19 55741043 6 + 59248254 aaaaaa i macFas5.chr19 C 0 I 1144 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47846603 597 + 51301725 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=13630.000000 s hg38.chr19_GL949747v2_alt 587485 168 + 729520 aTACAAAGAATGAAGGGTcagtggtatgctagggccagcccgtgctgcctaatgggggcttcctatatgtacctataccaacgtccatgggctgtgatttcacactgatagtacaaaatcacaaggggagtgtttatgccacagaaatcagcaaacacggcagggcgc s nomLeu3.chr10 103309883 159 - 106955855 ATACAAAGAATGAAGGGTcagtggtatgctagggccagcccgtgctggctaatgggggcttcctacatgtacctataccaacatccatgggctgtgatttcacactgatagtacaaaatcacaa---------tcataccacagaaatcagcaaacacggcagggcgt i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47846603 597 + 51301725 I e macFas5.chr19 55741049 1144 + 59248254 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=59802.000000 s hg38.chr19_GL949747v2_alt 587653 413 + 729520 ggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggataacctgaggtcgggagctcaagaccagcctgaccaacacggcgaaac-cccatctctactaaaaatacagaaatta--caggcg--------ggtgcctgtaatcccagctactcaggaggccgagacaggagaatcacacttgaacctgggaggtggaggttgca-tgatctgagatcacgccattgcactcgagcctcggcaacaagaacaagactctgtctcaaacaaacaaaaaaacaaatcagcaaacactacaaaccaagacttcctcgccaccaaccctcagagccacttgtttaacatttcagcccaccactgAATGACACATTGAAAACAAATAGCAAGAGGACAGATATAAATATAACTGTACT s nomLeu3.chr10 103310042 423 - 106955855 ggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacctgaggtccggagctcgagaccagcctgaccaacacagcgaaac-cctgtctctactaaaaatacaaaaattaaccaggcgtggtggcaggtgcctataatcccagctactcaggaggccaagacaggagaatcacacttgaacctgggaggtggaggttgca-tgatccgagatcacgccattgcactcgagcctgggcaacaagaacaaaactctgtctcaaacacacaaaaaaagaaatcagcaaacactacaaaccaagacttcctcgccaccaaccccaagagccacttgtttaacatttcagcccaccactgAATGACACATCGAAAACAAATAGCAGGAGGACAGATATAAATATAACTGTACT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47847200 307 + 51301725 ggtggctcaggcctggaatcccagcac-ttgggaggccaaggcaggtggatcacctgatgtcagccatttgagaccagcctggcccacgtggaGAAacgcccgtctctactaaaaatatagaagccagccaggcgtagtggcaggaacctgtaatcccaggtacttgggaggctgaggcaagagaat--cgcttgaacccaggaggcagaggttgcagtgagccgagatggcaccattggactccagcctgggcaacaagagcgaaactccgttt-----aaataaatgaattaatta----------------------------------------------------------------------attaaat----------aaataaataa------------------------------ i papAnu2.chr19 I 597 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e chlSab2.chr6 47555453 1731 + 50890351 I e macFas5.chr19 55741049 1144 + 59248254 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=225527.000000 s hg38.chr19_GL949747v2_alt 588066 475 + 729520 ggccgggtatggtggctcaggcctggaatcccagcactttgggaggctgaggcaggtggatcgcctgatgtcaggagtttgagacccgcctggcccacatggtgaaaccccatctctactaaaaatacaaaagctagccaagtgtagtggtaggaacctgtaatcccaggtacgtgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatagcgccattgtactccagcctgggcaacaagagcgaaactctatctcaaaaaaaaa----------------aaaCttagccaggcctggtggaa---catacccgtagtcccagatacttgggaggctgacacaggaggattgtttgagcctacgatttggaggttgcagtgagccagccactgcacgcc-agcctgggtgacagagtgaggccctgtctcaaaaGTAAGTAACTAATggccgggtgcggtggctcac s nomLeu3.chr10 103310465 491 - 106955855 ggccgggcacggtggctcaggcctggaatctcagcactttgggaggccaaggcaggcagatcacctgacgtcaggagtttgagaccagcctggcccacatggtgaaaccccatctctactaaaaatacagaagctagccagacgtattggcaggaacctgtaatcccagggacttgggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagccgagatggtgccattgtactacagcctgggcaacaagagcaaaactccttctcaaaaaaaaataataataataataataaTCttagccaggcctggtggag---catacctgtagtcccagatacttgggaggctgacacaggaggatcgtttgagcttgcgatttggagattgcagtgagccagccactgcactcc-agcctgggtgacagagtgaggcactgtctcaaaaGTAAGTAACTAATggctgggcgcagtggctcac i nomLeu3.chr10 C 0 I 759 s macFas5.chr19 55742193 486 + 59248254 ggccaggtgcagtggctcacgcctgtaatcccagcacgttgggaggcggaggcagcaggatcacctgatgtcagacgtttgagaccagcctggcccacgtggagaaaccccgtctctactaaaaatatagaagccagccaggtatagtggcaggaacctgtaatcccaggtacttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagccaagatggcgtcattgtactccagcctgggcaacaagagcgaaactctgtctcaaaaaaaaa-----aaaaaaaaaaaaatcgtagccaggcctggtggtggtacatgcctgtagtcccagatacttgggaggctgacccaggagaatcgtctgagcctgcgatttggaggttgcagaa----agccactgcactccttgcctgggtgacagagtgaggccctgtctcaaaaGTAAGTAACTAATggctgggcgcggtggctcac i macFas5.chr19 I 1144 C 0 s papAnu2.chr19 47847507 486 + 51301725 ggccaggtgcagtggctcacgcccgtaatcccagcacgttgggaggcggaggcagcaggatcacctgatgtcagacgtttgagaccagcctggcccacgtggagaaaccccgtctctactaaaaatatagaagccagccaggtgtagtggcaggaacctgtaatcccaggtacttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagccaagatggcgtcattgtactccagcctgggcaacaagagcgaaactctgtctcaaaaacaaa-----acaaaacaaaaaatcgtagccaggcctggtggtggtacatgcctgtagtcccagatacttgggaggctgacccAGGAGAATCGTCTGAGCCTGCGAtttggaggttgcagag----agccactgcactccttgcctgggtgacacagtgaggccctgtctcaaaactaagTAActaatggctgggcgcggtggctcac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e chlSab2.chr6 47555453 1731 + 50890351 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=65923.000000 s hg38.chr19_GL949747v2_alt 588541 260 + 729520 gcctgtaatcccagcactttgggaggccgaggcaggcggatcacgaggtc---aggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaacaattagccgggcgtggtggcgggcgcctgtagtcccagctactcgg-gaggctgaggcaggagaatggcgggaacccgg--gaggcggagcttgcagtgagcggagatcgcgccaccgcactccagcctgggcgacagagcgagactccgtct s nomLeu3.chr10 103311715 219 - 106955855 gcctgtaatcccagcactttaggaggccaaggcaggcggatcacgaggtc---------------------------------------------tctactaaaaatacaaaaaattaaccaggcatggtggcaggcgcctgtagtcccagctactcagagaggctgaggcaggagaatggcgggaacccgg--gaggcggagcctgcagtgagccgagatggagtcactgcactccagcctgggcgacagagcgagactccgtct i nomLeu3.chr10 I 759 I 20 s macFas5.chr19 55742679 219 + 59248254 acctgtaatcccaacactttgggaggctgaggcagcaggatcccttgaatctggggagttggagaccagcctgagaagcaaggccaaaacctatctctact----------------------------------------------ctagctacttgg-ggagctgaggcaggaggatttcttgagcccggaaaaagctgaggctgcagtgagtcaagatcgtactactgcattctagcctgggtgacaaagtgagactctgcct i macFas5.chr19 C 0 I 26 s papAnu2.chr19 47847993 219 + 51301725 acctgtaatcccaacacttcgggaggctgaggcagcaggatcccttgaatctggggagttggagatcagcctgagcagCAAGGCCAAAACCTATCTCTACT----------------------------------------------ctagctacttgg-ggagctgaggcaggagaatttcttgagcccagaaaaagctgaggctgcagtgagtcaagatcgcactactgcattctagcctgggtgacaaagtgagattctgcct i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e chlSab2.chr6 47555453 1731 + 50890351 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=-125.000000 s hg38.chr19_GL949747v2_alt 588801 1 + 729520 G s papAnu2.chr19 47848212 1 + 51301725 c i papAnu2.chr19 C 0 I 26 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e nomLeu3.chr10 103311934 20 - 106955855 I e chlSab2.chr6 47555453 1731 + 50890351 I e macFas5.chr19 55742898 26 + 59248254 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949747v2_alt 588802 18 + 729520 GGTTGGGGGGGCGGGGGG e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e nomLeu3.chr10 103311934 20 - 106955855 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47848213 26 + 51301725 I e macFas5.chr19 55742898 26 + 59248254 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=182.000000 s hg38.chr19_GL949747v2_alt 588820 2 + 729520 AA s ponAbe2.chr19 56775617 2 + 60714840 aa i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910494 372 + 49145316 I e nomLeu3.chr10 103311934 20 - 106955855 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47848213 26 + 51301725 I e macFas5.chr19 55742898 26 + 59248254 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=8211.000000 s hg38.chr19_GL949747v2_alt 588822 4 + 729520 GAGG s ponAbe2.chr19 56775619 4 + 60714840 GAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103311954 4 - 106955855 GAGG i nomLeu3.chr10 I 20 C 0 s rheMac3.chr19 60602628 4 + 64156825 GAGG i rheMac3.chr19 I 1826 C 0 s papAnu2.chr19 47848239 4 + 51301725 gagg i papAnu2.chr19 I 26 C 0 s chlSab2.chr6 47557184 4 + 50890351 GAGG i chlSab2.chr6 I 1731 C 0 s calJac3.chr22 45910866 4 + 49145316 GAGG i calJac3.chr22 I 372 C 0 e canFam3.chr1 102637494 0 + 122678785 I e macFas5.chr19 55742898 26 + 59248254 I e panTro4.chr19 59862159 0 + 63644993 C a score=205284.000000 s hg38.chr19_GL949747v2_alt 588826 107 + 729520 CAGCCTGGAAAATAAATAACAGAAAAAGTGACTTGCCAAGCCCGGGTGCTGATAGAGGTGGACAGCTTTACCCTTGGAGGGAACAGCAAATC-TTTTTCCCCAGCTGT s ponAbe2.chr19 56775623 107 + 60714840 CACCCTGGAAAATAAATAACAGAAAAAGTGACTTGCCAAGCCCGGGTGGTGATAGAGGTGGACAGCTTTACCCTTGGAGGGAACAGCAAATC-TTTTTCCCCAGCTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103311958 104 - 106955855 CAGCCTGGAGAATAAATAACAT----TGTGACTTGCCAAGCCTGGGTGGTGACAGAGGTGGACAGCTTTACCCTTGGAGGGAACAGCAAATCTTTTTTCCCCAGCTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60602632 104 + 64156825 CAGCCTGGAAAATAAATAACAG--AAAATGACTTGCCAAGCCCAGGTGGTGATAGAGGTGGACAGCTTTACCCTTGCAGGGAACAGCAACT--TTTTTCCCCAGCTGT i rheMac3.chr19 C 0 I 1680 s macFas5.chr19 55742924 104 + 59248254 CAGCCTGGAAAATAAATAACAG--AAAATGACTTGCCAAGCCCAGGTGGTGATAGAGGTGGACAGCTTTACCCTTGGAGGGAACAGCAACT--TTTTTCCCCAGCTGT i macFas5.chr19 I 26 C 0 s papAnu2.chr19 47848243 103 + 51301725 cagcctggaaaataaataacag--aaaatgattTGCCAAGCCCAGGTGGTGATAGAGGTGGACAGCTTTACCCTTGGAGGGAACAGCAGC---TTTTTCCCCAGCTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47557188 99 + 50890351 CAGCCTGGA----AAATAACAG--AAAATGACCTGCCAAGCCCAGGTGGTGATAGAGGTGGACAGCTTTACCCTTGGAGGGAACAGCAAC---TTTTTCCCCAGCTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45910870 101 + 49145316 CAGGCTGGAAAACGAA-AACGG--AAAGTGACTGGCCAAGCCCAGGTGGTGGCAGAAGTGGACAGCTTTACCCT---GAGGAAGGGCAGCTC-TTTCTCCTCAGCTTT i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e panTro4.chr19 59862159 0 + 63644993 C a score=4011.000000 s hg38.chr19_GL949747v2_alt 588933 2 + 729520 GA s ponAbe2.chr19 56775730 2 + 60714840 GA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103312062 2 - 106955855 GA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55743028 2 + 59248254 GA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47848346 2 + 51301725 GA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47557287 2 + 50890351 GA i chlSab2.chr6 C 0 I 1464 s calJac3.chr22 45910971 2 + 49145316 GA i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e rheMac3.chr19 60602736 1680 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=4899.000000 s hg38.chr19_GL949747v2_alt 588935 5 + 729520 CGtgt s ponAbe2.chr19 56775732 5 + 60714840 GGtgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103312064 5 - 106955855 GGtgt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55743030 5 + 59248254 GGTAT i macFas5.chr19 C 0 I 1534 s papAnu2.chr19 47848348 5 + 51301725 GGTAT i papAnu2.chr19 C 0 I 1593 s calJac3.chr22 45910973 5 + 49145316 GGTAT i calJac3.chr22 C 0 I 1761 e canFam3.chr1 102637494 0 + 122678785 I e chlSab2.chr6 47557289 1464 + 50890351 I e rheMac3.chr19 60602736 1680 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=151294.000000 s hg38.chr19_GL949747v2_alt 588940 679 + 729520 ggggaaaaggaggacagatcagactgttactgtgtctatgtagaaagaaatagacataagagactccattttgttctgtactaagaaaaattcttctgccttgagatgctgttaacctgtaaccctagccccaaccctgtgctcccagaaacatgtgctgtgtcacac-gtgggtttagggctatgcaggatgtgctttgttaaacagatgcttgaaggcagcatgcttgttaaaagtcatcaccactctctaatctcaagcacccagggacacaatacactgcggaaggctgcagggacctctgcctagaaaagccaggtattgtccaaagtttctccccatgtgatagcctgagataaggcctcgtgggaagggaaagaccagaccgtaccccagcccgacacccgtaaagggtctgtgctgaagaggattagtataagaggaaggcctttttgcagt-----taagaggaaggtatctgtctcctgctcgtccctgggcaatggaatgtctcggtgtaaaacccgatggtatgttccatccaccgagataggggaaaaccgccttagggctggaggtgacacatgctggcagcaatactgctctttaatgcaccagatatgtttatgtatgagcacatc-aaggcacagcacatttcctaaccttgtttatgacac--agacatt s ponAbe2.chr19 56775737 678 + 60714840 ggagaaaagaagtagaaatcagactgttactgtgtctatgtagaaagaagtagacataagagactccattttgttctgtactaagaaaaattcttctgccttgagatgctgttaacctgtaaccctacccccaaccctgtgctcccagaaacatgtgctgtgtcatttaatgggtttacggctatgcaggatgtgctttgttaaacaaatgcttgaaggcagtatgcttgttaaaagtcatcacca--ctctaatctcaagcacccagggacacaaaacactgcggaaggccgcagggacttctgcctaggaaagccaggtactgtccaaggtttctccccgtgtgatagcctaagatatggcctcctgggaagggaaagacctgaccttcccctagcccgacacccgtaaagggtctgtgcttaagaggattagtaaaagaggaagccctctttgcagt-----taagaggaaggcatctgtctcctgctcgtccctgggcaatggaatgtctcggtgtaaaacccgatggtatgtttcttctactgagatagaagaaaaccgccttagcactggaggtgggacatgctggcggcaatactgctctttaatgcaccag--atgtttatgtatgtgaacatcaaaagtaca-cacattttctaaccttgtttatgacacagagacatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103312069 657 - 106955855 ggggcaaaggag---agatcagactgttactgtgtctatgtagaaagaagtagacataagagactccattttgttctgtactaagaaaaattcttctgccttgagatgctgttaacctgtaaccctacccccaaccctgtgcacgcagaaacatgtgctgtgtcgtttaatggatttagggctatgcgggatgtgctttgttaaacaaatgcttgaaggcagtatgcttgttaaaagtcatcaccactctctaatctcaagcacccagggacacaaaacac-gcagaaggccgcagggacctctgcctaggaaagccaggtattgtccaaggtttctccccatgtgatagtctgaaacatggcctcgtgggaagggaaagacctgaccgtcccctag-------------------ctgtg-----gaggattagtgaaagaggaagacttctttgcagttgagataagaggaaggcatctgtctcctgctcatctgtgggcaatagaatgtctc-gtgtaaaactcgattgtatgttccatctactgagatagaagaaaaccgccttagggctggaggtcagacatgctggtggcaatactgctctttaatacaccagctatgtttatgtatgtgcacatcaaagcgacaccatattttctaagcttgtttatgacag--agacatt i nomLeu3.chr10 C 0 I 246 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910978 1761 + 49145316 I e chlSab2.chr6 47557289 1464 + 50890351 I e papAnu2.chr19 47848353 1593 + 51301725 I e macFas5.chr19 55743035 1534 + 59248254 I e rheMac3.chr19 60602736 1680 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=40282.000000 s hg38.chr19_GL949747v2_alt 589619 520 + 729520 tgctcacatgttttcctgctgaccctctccccactgttaccctattgtcctgccacatccccgtctccgagatggtagagataatgaccaataaatactgaaggaactcagagacccggccggcgcgggtc-------tcctga---------------gcccacttttctttctgtgtactttgtctctgtgtctctttcttttctcagtctctcgtcccacctgacaagaaacacccacaggtgtggaggggcaggccaccccttcaGTGAGGTATAATTACATATATCCTattttaggatggagcaggaagagcatgagagcccaggagttccagaccagcctgggcgacacaaggagaccttgtctctaTTTTTTAAGTAtttttaaagtaatatatacaacgtttacttgtcaaagtgtacagcatggagcgatgttatatatacagtgaaatgattaccacaatccagctaattaacatatccactgcttcatatagttgcctttcgtttttgcagtgacaacgcttgatgtactt s ponAbe2.chr19 56776415 535 + 60714840 tgttcacatgttctccagctgaccctctccccactattaccctattgtcctgccacacccc--tctctgagatggtagagataatgatcaataaatactgaaggaactcag-gaccaggctggcgcgggtcctccgtatgctgagcgccggtccccagggcccacttttctttctctatattttgtctctgtgtc----tcttttctcagtctctcatcccacccgacaagaaacacctacaggtgtggaggggcaggccaccccttcaGTGAGGTATAATTACATATATACAattttaggactgagcaggaagagcatgtgagcccaggacctccagaccagcctgggcaacacaaggagaacttgtctctaTTTTTTAAGTAttttaaaagtaatatatacaatgtttacttatcaaagtgtacagcatggagcgatgttatatatacagtgaaatgattaccacaatccagctaattaacatatctgctgcctcatatagttgcctttcctttttgcagtgagaacgcttgatctactt i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47557289 1464 + 50890351 I e papAnu2.chr19 47848353 1593 + 51301725 I e macFas5.chr19 55743035 1534 + 59248254 I e rheMac3.chr19 60602736 1680 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949747v2_alt 590139 59 + 729520 agaaaaattcaggGTTTTTTggccaggcacggtggctcacgcctgtaatcccagcacta e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56776950 0 + 60714840 C e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47557289 1464 + 50890351 I e papAnu2.chr19 47848353 1593 + 51301725 I e macFas5.chr19 55743035 1534 + 59248254 I e rheMac3.chr19 60602736 1680 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=23363.000000 s hg38.chr19_GL949747v2_alt 590198 268 + 729520 tgggaggccgaggcgggcagatcacaaggtgaggagctcaagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaaaaaattagccgggcatggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcttgaacctgggaggcggagcttgcagtgagccaagatcgcgccactgcactccagcctgggcgagtgagactccctctcaaaaaaaaaaaaaaaaagaaaagaaa s panTro4.chr19 59862159 261 + 63644993 tgggaggccgaggcgggcagatcacaaggtgaggagctcaagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaaaaaattagccaggcatggtggcgggcgcctgtagccccagctacttgggaggctgaggcaggataatggtgtgaacctgggaggcggagcttgcagtgagctgagatcgcgccactgcactccagcctgggcgagtgagactccctctcaaaaaaaaaaaaaaa-------gaaa i panTro4.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56776950 0 + 60714840 C e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47557289 1464 + 50890351 I e papAnu2.chr19 47848353 1593 + 51301725 I e macFas5.chr19 55743035 1534 + 59248254 I e rheMac3.chr19 60602736 1680 + 64156825 I a score=315912.000000 s hg38.chr19_GL949747v2_alt 590466 1247 + 729520 agaaaaaTTCAGGGttttttttttctttttcagaa--agtcttgctctgtcgcccaggctggagtgcaatggtgcgaggcttaccacaacctcctcttcccgggttcaagcgattctcctgcctc-ggcctcccaagtagctgggattacaggtatgccccaccacacctaattttttttgtatttttagtacaaacggggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatctgcccacctcagcctcccaaagtgctgggattacaggtatgagccaccaggcctggccAAGTATTTTTTTTCCCAAGTACAtttttttcttttttt--cttttttttgagatggagtctccctctgttgcccaggctggagtgcagtggcacaatctcgactcactgcaacctccacctcccaggttcaagtgattctagtgcctcagcctctcaagaagctgggattacaggcgcaccgcatcacgccgggctagtttttgtatttttagtagagacagggtttcttgtttttttctgagatggagtcttgctctgtcacccaggctggagtgcagtggcgcgatctgggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccaagtagctgggactacaggcgcccgccactatgcccagctaattttttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatcttctgacctcgtgatccgcccgcctcggcctcccatagtgctgggattacaggcgtgagccaccgcgcccggccgagacagggtttctctatgttggccaggctggcctcgaactcctgacctcagctgatccacccgcctcggcctcccaaagtgctgggatcacaggcgtgagccaccgcatctggccATTTACAttttttttttttttt--gatgcagcatttcactctggttgcccaggctggagtgcagtggcgcaatctcagctcaccgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgtgccaccacgcccagctaattttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcaaactcccggcctcaggtgatctgaaagtgctgggattacaggcgtgagccaccgcgcccagccTACtttttttttttttt------------- s panTro4.chr19 59862420 1219 + 63644993 agaaaaaTTCAGGGttttttttttctttttcagaa--agtcttgctctgtcgcccaggctggagtgcaatggtgcgaggcttaccacaacctcctcttcccgggttcaagcgattctcctgcctc-agcctcccaagtagctgggattacaggtatgcgccaccacacctaattttttttgtatttttagtacaaacggggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatctgcccacctcagcctcccaaagtgctgggattacaggtatgagccaccaggcctggccAAGTATTTTTTTTCCCAAGTACAtttttttttcttttt-----ttttttgagatggagtctccctctgttgcccaggctggagtgcagtggcacaatctcgactcactgcaacctccacctcccaggttcaagtgattctagtgcctcagcctctcaagaagctgggattacaggcgcaccgcatcacgcctggctagtttttgtatttttagtagagacagggtttcttggttttttttgagacggagtcttgctctgtcacccaggctggagtgcagtggcgcgatctgggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccaagtagctgggactacaggcgcccgccactatgcccagctaattttttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatcttctgacctcgtgatctgcccgcctcggcctcccatagtgctgggattacaggcgtgagccactgcacccggccgagacagggtttctctatgttggccaggctggcctcgaactcctg----------------------------------------GGATCACAGGCGTGAGCAACCGCATCTGGCCATTTACAtttttttttttttttttgatgcggcatttcactctggttgcccaggctggagtgcagtggcgcaatctcagctcaccgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgtgccaccacgcccagctaattttgtatttttagcagagatggggtttctccatgttggtcaggctggtctcaaactcccgacctcaggtgatctgaaagtgctgggattacaggcgtgagccaccgcgcccagccTACttttttttttttttttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56776950 1253 + 60714840 agaaaaattcaggGtttcttttttctttttcagaaagagtcttgctctgtcgcccaggctggagtgcaatggtgcgaggcttaccacaacctcctcctcccaggttcaagcgattctcctccctcaggcctcccaagtaggtgggattacaggcatgcgccatcacacctaattttttttgtatttttagtacagacggggtttcaccatgttggccaggctgatcttgaactcctgacctcaggtgatctgcccgcctcagcctccgaaagtgctgggattacaggtatgagccaccaggcccggccAAGTA-TTTTTTTCCCAAGTACAtttttttcttttttttttttttttttgagacggagtctccctctgttgccca-gctggagcgcagtggcacaatctccactcactgcaacctccacctcccaggttcaagtgattctagtgcctcagcctctcaagaagctgggattacaggcgcactgcgtcacgcctggctagtttttgtatttttagtagagacagcatttctggtttttttttgagacagagtcttgctctgtcccccaggctggagtgcagtggtgcgatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcttcagcctcccgagtagctgggactacaggcgcctgccactatgcccatctaattttttttgtatttttagtagagacagggtttcaccgtgttacccaggatggtctcgatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggccgagacagggtttctctatgttggccaggctggcctcgaactcctgacctcaggtgatccacccacctcggcctcccaaagtgctgggatcacagttgtgaccaaccgcatctggccATCTACAttttttttttttttg-ggatgcgccgtttcactctggttgcccaggctggagtgcagtggctcaatctcagctcaccgcaacctctgcctcccgggttcaggtgattctcctgcctcagcctcccaagtagctgggattacaggcatgtgccaccacgcccagctaattttgcatttttaatagagatggggtttctccatgttggtcaggctggtctcaaactcccaatctcaggtgatctgaaagtcctgggattacaggtgtgagccaccatgcccagccTACtttttttttttttt-----------tt i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47557289 1464 + 50890351 I e papAnu2.chr19 47848353 1593 + 51301725 I e macFas5.chr19 55743035 1534 + 59248254 I e rheMac3.chr19 60602736 1680 + 64156825 I a score=2730.000000 s hg38.chr19_GL949747v2_alt 591713 3 + 729520 aaa s panTro4.chr19 59863639 3 + 63644993 aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56778203 3 + 60714840 aaa i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55744569 3 + 59248254 aaa i macFas5.chr19 I 1534 C 0 s papAnu2.chr19 47849946 3 + 51301725 aaa i papAnu2.chr19 I 1593 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47557289 1464 + 50890351 I e rheMac3.chr19 60602736 1680 + 64156825 I a score=18023.000000 s hg38.chr19_GL949747v2_alt 591716 18 + 729520 cagggtcttcatctcatc s panTro4.chr19 59863642 18 + 63644993 cagggtcttcatctcatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56778206 18 + 60714840 cagggtctccatctcatc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55744572 17 + 59248254 cagggttacc-tctcatc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47849949 17 + 51301725 cagggtcacc-tctcatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47558753 18 + 50890351 cagggtcaccatctcatc i chlSab2.chr6 I 1464 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e rheMac3.chr19 60602736 1680 + 64156825 I a score=968054.000000 s hg38.chr19_GL949747v2_alt 591734 574 + 729520 caggctggagtgcagtggctcaatcacacctcattgcagcccccacctcctggctcaggtgatcctcccacctcaccccacaagtagcttggacacagcacaaggtctggccttctttgttttttgagacggagtcgcactctgtctcccaggctggagtgcagtggcgcgatctcagctcattgcaacct-ccccctcctaggtttaagctattctcctgcctcaaccttccaagtaactgggattacaggcatgcaccaccacacctggctaatttttgtgtttttagtagagacagggtttcaccattttgggcaggctggtctcaaacttctggcctcaagtgatccacccgcctcggcctcccaaagtgttgggataacaggcatgaaccactgtgcctggccttatatttttttgtaatgacagagttttaccatgttgcccaggctagtctcaatctcctgaactcCTCTAAACTATATTTG-AATAGAAGTCCTTAAGACA---TTAggccaggcgtggtggctcacacctggaatcccagcactttgggaggccgaggcagacagattac s panTro4.chr19 59863660 575 + 63644993 caggctggagtgcagtggctcaatcacacctcattgcagcccccacctcctggctcaggtgatcctcccacctcaccccacaagtagcttggacacagcacaaggtctggccttctttgttttttgagatggagtcgcact--gtctcccaggctggagtgcagtggcacgatctcagctcattgcaacct-ccccctcctaggtttaagctattctcctgcctcaaccttccaagtaactgggattacaggcatgcaccaccacacctggctaatttttgtgtttttagtagagacagggtttcaccattttgggcaggccagtctcgaactcctggcctcaagtgatccacccgcctcggcctcccaaagtgttgggataacaggcatgaaccactgtgcctggccttgtatttttttgtagtgacagagttttaccatgttgcccaggctagtctcaatctcctgaactcCTCTAAACTATATTTG-AATAGAAGTCCTTAAGACAACATTAggccaggcacggtggctcacacctggaatcccagcactttgggaggccgaggcagacggattac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56778224 578 + 60714840 caggctggagtgcagtggctcaatcacacctcattgcagcccccacctgccggctcaggtgatcctcccacctcaccccacaagtagcttggacacagcacaaggtctggccttctttgttttttgagacggggtcccactctgtctcccaggctggagtgcagtggtgagatctcagctcattgcaacct-ccccctcccaggtttaagctattctcctgcctcaactttcgaagtaactgggattacaggcatgcaccaccatacctggctaatttttgtgtttttagtagagatggggtttcaccattttgggcaggctggtctcgaactcctggcttcaagtgatccacccgcctcggcttcccaaagtgttgggataacaggcatgaaccactgtgcctggccttgtatttttttgtagagacagagttttaccatgttgcccaggctagtctcaatctcctgagctcCTCTAAACTATATTTGAAATAGAAGTCCTTAAGACAACATTAggccaggtgcggtggctcacgcctggaatcccagcactttgggaggccgaggcagacggattac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60604416 516 + 64156825 caggctggagtgca-gtgcacaatcacacctcattgcagcccccacctcccgactcaggtgatcctcccacctcaccccacaagtagcctggacacagcacgcggtctggccttctttgttttttgagacggagtctccctctgtgtcccagactggagtgcagtggcacgatctcagctctctgcaacctccccccttcccggtttaagccattctcctgcctcaaccttccaactaacagggattacaggcatgcaccactacacctggctaacttttgtgtttt----------------------------------------------------------tgattcgcccatctcggcctcccaaagtgttgggataacaggcatgagccattgtgactggccttgt-cttttttggagagac--agttttaccatgttgcccagactagtctcaaactcctgagctcCTCTAAACTATATTTG-AATAGAAGTCCTTAAGACAACATTAggccaggcgcggtggctcacgcctggaatcccagcactttgggaggccgaggcaggcggatcac i rheMac3.chr19 I 1680 C 0 s macFas5.chr19 55744589 573 + 59248254 -aggctggagtgca-gtgcacaatcacacctcattgcagcccccacctcccgactcaggtgatcctcccacctcaccccacaagtagcctggacacagcacgcggtctggccttctttgttttttgagacggagtctccctctgtgtcccagactggagtgcagtggcacgatctcagctcactgcaacctccccccttccaggtttaagccattctcctgcctcaaccttccaactaacagggattacaggcatgcaccactacacctggctaacttttgtgtttttagtagagacggggtttcaccattttgggcaggctagtctcgaactcctggcctcaaatgattcgcccatctcggcctcccaaagtgttgggataacaggcatgagccattgtgactggccttgt-cttttttggagagac--agttttaccatgttgcccagactagtctcaaactcctgagctcCTCTAAACTATATTTG-AATAGAAGTCCTTAAGACAACATTAggccaggcgcggtggctcacgcctggaatcccagcactttgggaggccgaggcagacggatcac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47849966 571 + 51301725 -aggctggagtgcaggggcacaatcacacCTCattgcagcccccacctcccgactcaggtgatcctcccacctcacctcacaAGTAGCCTGGACACAGCACGAGGTctggccttctttgttttttgagacggagtctccctctgtgtcccagactggagtgcagtggcgcgatctcagctcactgcaacctccccccttccaggtttaagccattctcctgcctcaaccttccaactaattgggattacaggcatgcaccactacacctggctaacttttgtgtttttagtagagacggggtttcaccattttgggcaggctggtctcgaactcctggcctcaaatgattcgcccacctcggcctcccaaagtgttgggataacaggcatgagccactgtgactggccttgt-cttttttggagagac--agttttaccatgttgcccagactagtctcaaactcctgagctcctcTAAACTATATTTG-AATAGAAGTCCTTAAG---acattaggccaggcgcggtggctcacgcctggaatcccagcactttgggaggccgaggcagacggatcac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47558771 571 + 50890351 -aggctggagtgcagtggcacaatcacacctcattgcagcccccacctcccggctcaggtgatcctcctacctcaccccacaagtagcctggacacagcatgaggtccggccttctttg--ttttgagacggagtctccctctgtgtcccagactggagtgcagtggcgcgatctcagttcactgcaacct-ccccctcccaggtttaagccattctcctgcctcaaccttccaactaactgggattataggcatgcaccaccacacctggctgatttttgtgtttttagtagagacggggtttcaccattttgggcaagctggtctcgaactcctggcctcaaatgatttgcccacctcggcctcccaaagtgttgggataacaggcatgagccactgtgactggccttgt-cttttttggagagac--agctttaccatgttacccagactagtctcaaactcctgagctcCTCTAAACTATATTTG-AATAGAAGTCCTTAAGACAACATTAggccaggcgcggtggctcacgcctggaatcccagcactttgggaggccgaggcagacggatagc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=462384.000000 s hg38.chr19_GL949747v2_alt 592308 232 + 729520 ctaaagtcaggagttcaagaccagcctggccaacatggtgagaccccgtctctactaaaaatacaaaaattagctgggcatggtggcacgtgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgggtgaacccaggaggcggagtttgcagcgaaccaagatcacgccactgcactccagcctgggcgacagagggagactccgtctcaaaaaaaaaaaa-------------- s panTro4.chr19 59864235 232 + 63644993 ctaaagtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggcggcacgtgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgggtgaacccaggaggcggagtttgcagtgaaccaagatcacgccactgcactccagcctgggcgacagagggagactccatctcaaaaaaaaaaaa-------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56778802 232 + 60714840 ctaaagtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaatattagccaggcgtggtggcacatgcctgtaagcccagctactcaggaggctgaggcaggagaatggcggctgaaccctggaggcggagcttgcagtgagcccagatcgcgccactgcactccagcctgggcgacagagggagactccgtctcaaaaaaaaaaaa-------------- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60604932 220 + 64156825 ctaaagtcaggagttcaagaccagcctagccaacatggtgaaaccctgtgtctactaaaaatacaaaaattagctgggcgtagtggcgggtgcctgtaatccccgctactcaggagactgaggcaagaaa----------atcccaggaggcggaggttgcagtgagcagagatcatgccactgtacgcgagcctgggca--agagtgagactctgactaaaaaaaaaaaaa-------------- i rheMac3.chr19 C 0 I 17 s macFas5.chr19 55745162 220 + 59248254 ctaaagtcaggagttcaagaccagcctagccaacatggtgaaaccctgtgtctactaaaaatacaaaaattagctgggcgtggtggcgggtgcctgtaatcccagctactcaggagactgaggcaagaaa----------atcccaggaggcggaggttgcagtgagcagagatcacgccactgtacaccagcctgggca--agagtgagactctgtctaaaaaaaaaaaaa-------------- i macFas5.chr19 C 0 I 6 s papAnu2.chr19 47850537 220 + 51301725 ctaaagtcaggagttcaagaccagcctggccaacatggtgaaaccctgtgtctactaaaaatacaaaaattagctgggcgtggtggcgggtgcctgtaatcccaggtactcaggagactgaggcaagaaa----------atcccaggaggcagaggttgcagtgagcagagatcatgccactgcacaccagcctgggca--agagtgagactctgtctaaaaaaaaaaaaa-------------- i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47559342 229 + 50890351 ctaaagtcaggagttcaagaccagcctggccaacatggtgaaaccctgtgtctactaaaaatacaaaaattagctgggcgtggtggcgggtgcctgtaatcccagctactcaggagactgaggcaagaaaa-atcacttgatcccaggaggcggaggttgcagtgagcagagatcatgccactgcactccagcctgggca--agagtaagactctgtcttaaaaaaaaaaaa-------------- i chlSab2.chr6 C 0 I 22 s calJac3.chr22 45912739 244 + 49145316 ctgaggtcaggaattcgagaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaactagccaggtgtggtgatgcgtgcctgttatcacagctactcgggaggctaagacagaaga--atcactggaacccgagaggtggagtttacagtgggcggagatcccaccactgcactccagcctgggtgacggagtgagactctatctccaaaaaaaaaaaaaaaaaaaaaaaaa i calJac3.chr22 I 1761 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=1368.000000 s hg38.chr19_GL949747v2_alt 592540 8 + 729520 a---------TCAAAGA s panTro4.chr19 59864467 17 + 63644993 aaaaaaaaaaTCAAAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56779034 10 + 60714840 a-------aTTCAAAGA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55745388 8 + 59248254 ---------agaaaaga i macFas5.chr19 I 6 I 10 s papAnu2.chr19 47850760 8 + 51301725 ---------agaaaaga i papAnu2.chr19 I 3 I 10 s chlSab2.chr6 47559593 8 + 50890351 ---------agaaaaga i chlSab2.chr6 I 22 I 10 s calJac3.chr22 45912983 8 + 49145316 ---------aTCAAAAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I e rheMac3.chr19 60605152 17 + 64156825 I a score=176666.000000 s hg38.chr19_GL949747v2_alt 592548 81 + 729520 TCCTTCCAGCATCCTCGCACCAACCATTAAGGCTT-GGGAAGGGCTA---TGGTGGAAACTCAACCAATAGCTTCTTCTCCCTTA s panTro4.chr19 59864484 81 + 63644993 TCCTTCCAGCATCCTCGCACCAACCATTAAGGCTT-GGGAAGGGCTA---TGGTGGAAACTCAACCAATAACTTCTTCTCCCTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56779044 84 + 60714840 TCCTTCCAGCACCCTCACACCAACCATTAAGGCTT-GGGAAGGGCTATGGTGGTGGAAACTCAACCAATAATTTCTTCTCCCTTA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60605169 82 + 64156825 TCCTTCCAGCATCCTCACACCAACCATTAAGGCTTAGGGAAGGGCTA---TGGTGGAAACTCAACCAATAATGTCTTCTCCCTTA i rheMac3.chr19 I 17 C 0 s macFas5.chr19 55745406 81 + 59248254 TCCTTCCAGCATCCTCACACCAACCATTAAGGCTT-GGGAAGGGCTA---TGGTGGAAACTCAACCAATAATGTCTTCTCCCTTA i macFas5.chr19 I 10 C 0 s papAnu2.chr19 47850778 81 + 51301725 tcctTCCAGCATCCTCACACCAACCATTAAGGCTT-GGGAAGGGCTA---TGGTGGAAACTCAACCAATAATGTCTTCTCCCTTA i papAnu2.chr19 I 10 C 0 s chlSab2.chr6 47559611 81 + 50890351 TCCTTCCAGCATCCTCACACCAACCATTAAGGCTT-GGGAAGGGCTA---TGGTGGAAACTCAACCAATAGTGTCTTCTCCCTTA i chlSab2.chr6 I 10 C 0 s calJac3.chr22 45912991 67 + 49145316 --------------TCACACCAACCGTCAGGGGTT-GGGAAGGGCCA---TGGGGGAAACTCAACCAATAATTACTCCTCCCCGG i calJac3.chr22 C 0 I 259 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=12834.000000 s hg38.chr19_GL949747v2_alt 592629 6 + 729520 AACGAG s panTro4.chr19 59864565 6 + 63644993 AACGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56779128 6 + 60714840 AACGAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60605251 6 + 64156825 AATGAG i rheMac3.chr19 C 0 I 120 s macFas5.chr19 55745487 6 + 59248254 AACGAG i macFas5.chr19 C 0 I 119 s papAnu2.chr19 47850859 6 + 51301725 AACGAG i papAnu2.chr19 C 0 I 119 s chlSab2.chr6 47559692 6 + 50890351 AACGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45913317 6 + 49145316 AAAGAA i calJac3.chr22 I 259 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=781.000000 s hg38.chr19_GL949747v2_alt 592635 1 + 729520 A s panTro4.chr19 59864571 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56779134 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55745612 1 + 59248254 G i macFas5.chr19 I 119 C 0 s papAnu2.chr19 47850984 1 + 51301725 G i papAnu2.chr19 I 119 C 0 s chlSab2.chr6 47559698 1 + 50890351 G i chlSab2.chr6 C 0 I 119 s calJac3.chr22 45913323 1 + 49145316 G i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I e rheMac3.chr19 60605257 120 + 64156825 I a score=102333.000000 s hg38.chr19_GL949747v2_alt 592636 50 + 729520 AGACAAAGAAATCGATGCAAGAACCAGCACTCACCTCCCTCAGGTCAGGT s panTro4.chr19 59864572 50 + 63644993 AGACAAAGAAATCGATGCAAGAACCAGCACTCACCTCCCTCAGGTCAGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56779135 50 + 60714840 AGACAAAGAAATCGATGCAGGAACCAGCACTTACCTCCCTTAGGTCAGGT i ponAbe2.chr19 C 0 I 121 s rheMac3.chr19 60605377 50 + 64156825 AGACAAATAAATTGATTCAAGAACCAGCACTCACCTCCCTTAGGTCTGGA i rheMac3.chr19 I 120 C 0 s macFas5.chr19 55745613 50 + 59248254 AGACAAATAAATTGATTCAAGAACCAGCACTCACCTCCCTTAGGTCTGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47850985 50 + 51301725 AGACAAATAAATTGATTCAAGAACCAGCACTCACCTCCCTTAGGTCTGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47559818 50 + 50890351 AGACAAATGAATTGATTCAAGAACCAGCACTCACCTCCCTTAGGTCTGGA i chlSab2.chr6 I 119 C 0 s calJac3.chr22 45913324 49 + 49145316 AGACGAAGAAACTGATGCAAGCATCAGCACTCACCTCCGT-AGAGCAGGA i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=2128422.000000 s hg38.chr19_GL949747v2_alt 592686 1072 + 729520 CTTGCTTCCAGCCTGTGTTTCCTGCAAAGGAAACGGATAAAAAG-------GGGAGGTCT----CTGGCCCTTGGTACGCTAGGTGGAGAGACAGCTTTCCCGCCCAGGGTGGAACCGCCCCACTGAGATTAACATTGGGTGGCTCCCAACCACTGACCTCAGGCTCACCTTGACATCAcctgggccccatcctcagggatttggctgtaattgggcttcagtgggctttggagaattacggcttgctgaatctccccaggtgagattaatgtgcaATTCCCTTCCTAGACCACCCGGGCCAGGTGTGATAGGCGACAGAACAGGAAA-TACACATTTTGGGTTTTGCAGGGTACCTGGCTCCCAGCTTTAAAAACTCTTGTAGAGa-aaaaaaattaaacaaaaataaa-----taaaaatt---aaaaaaaaAGAGGACAAAAACTCCCGTGACTTCCTAAGTTACAAATACAATAAGTCTACTTTGTggccaactgtggtgcctcctgcctataaatcccagcaggctgagaggcctaggccagtggatccctaggggccaggagtttgataccagcctaggcaacatagcaagatgccatctcttcaaaaatatttaataattagccatgcataggctgggcgtggtagctcatgcctgtagtcccagcaatttgggaagccgaggcgggtggatcacctgaggtcaggagttggaga-------------------------------ccagactggccaacgtg-gtgaaactctgtctc--------tactaaacatacaaaaaattagccaggtgtggtggcaggtgcctgtaatcccagctactcgggaggctgagacaggacaatcacttgaactagggaggtggagggtg-agtgaggcacgatcacgccattgcactccagcctgggtgacaagagcaaga--ct-gtct----caaaaacaaaaac-aaaaaa-attagccatacatgatgggctgcacctgtaatcccagctattcaggaggctgaggtgggaggatcacctga------gctcaggagtttgaggctgcagtgagctgtgactg-gccatctcactccagcctaggccacagagtgagacccagtctcaaaaaaa s panTro4.chr19 59864622 1073 + 63644993 CTTGCTTCCAGCCTGTGTTTCCTGCAAAGGGAACGGATAAAAAG-------GGGAGGTCT----CTGGCCCTTGGTACGCGGGGTGGAGAGACAGCTTTCCCGCCCAGGGTGGAGCCGCCCCACTGAGATTAACATTGGGTGGCTCCCAACCACTGACCTCAGGCTCACCTTGACATCAcctgggccccatcctcagggattcggctgtaattgggcttcagtgggctttggagaattacggcttgctgaatctccccaggtgagattaatgtgcaATTCCCTTCCTAGAGCACCCGGGCCAGGTGTGATAGGCAACAGAACAGGAAA-TACACATTTTGGGTTTTGCAGGGTACCTGGCTCCCAGCTTTTAAAACTCTTGTAGAGa-aaaaaaattaaacaaaaataaa-----taaaaatt---ttttaaaaaGAGGACAAAAACTCCCATGACTTCCTAAGTTACAAATACAATAAGTCTACTTTGTggccaactgtggtgcctcctgcctataaatcccagcaggctgagaggcctaagccagtggatccctaggggccaggagtttgataccagcctaggcaacatagcaagatgccatctcttcaaaaatatttaataattagccatgcataggctgggcgtggtagctcatgcctgtagtcccagcaatttgggaggccgaggcgggtggatcacctgaggtcaggagttggaga-------------------------------ccagactggccaacgtg-gtgaaactctgtctc--------tactaaacatacaaaaaattagccaggtgtggtggcaggtgcctgtaatcccagctactcgggaggctgagacaggacaatcacttgaactagggaggtggagggtg-agtgaggcacgatcacgccattgcactccagcctgggtgacaagagcaaga--ct-gtct----caaaaacaaaaacaaaaaaa-attagccatacatgatgggctgcacctgtaatcccagctattcaggaggctgaggtgggaggatcacctga------gcccagaagtttgaggctgcagtgagctgtgactg-gccacctcactccagcctaggccacagagtgagacccagtctcaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56779306 1080 + 60714840 CTTGCTTCCAGCCTGTGTTTCCTGCAAAGGAAATGGATAAAAAG-------GGGAGGTCTCTGACTGGCCCTTGGTACGTTGGGTGGAGGGAGAGCTTTCCCACCCAGGGTGGAGCCGCCCCACTGAGATTAACATTGGGTGGCTCCCAACCACTGACCTCAGGCTCACCTTGACATCACCT-ggccccgtcctcagggattcggctgtaattgggctgcagtgcgctttggagaatcacggcttgctgaatctcccctggtgaaattaatgtgcaATTCCCTTCCTAGACCACCCGGGGCAGGTGTGATAGGCGACGGAACAGGAAA-TACACATTTTGGGTTTTGCAGGGTACCTGGCTCCCAGCTTTAAAAATTCTTGTAGAGa-aaaaaaaataaacaaaaataaa-----taaaaattaaaaaaaaaaaaGAGGATAAAACCTCCAGTGACTTCCTAAGTTACAAATACAATAAGTCTACTTTGTGGCCAACTATggttgctcctgcctataaatctcagcaggctgagaggcctaggccagtggatccctaggggccaggagtttgagaccagcctaggcaacagagcaagaagccatctctacaaaaatatttaataattagccatgcataggctgggcgtggtagctcacgcctgtagtcccagcactttgggaggccaaggcgggtggatcacctgaggtcaggagttggaga-------------------------------ccagactggccaacatg-gtgaaaccctgtctc--------tactaaacatacaaaaaattagccaggtgtggtggcgggtgccta-aatcccagctactcgggaggctgagacaggacaatcacttgaactcaggaggtggagggtgcagtgaggcaagatcacgccattgcactctagcctgggtgacaggagcaagactct-gtct----caaaaacaaaaac-aaaaaa-attaaccatacatgatgggctgcacctgtaatcccagctattcaggaggctgaggtgggaggatcacctga------gcccaggagtttgaggctgcagtgagctgtgactg-gccacctcactccagcctgggccacagagtgagaccctgtctcaaaaaaa i ponAbe2.chr19 I 121 I 1391 s rheMac3.chr19 60605427 1082 + 64156825 CTTGCTTCCAGCCTGTATTTTCTGCAAAGGAACTGGATAAAAAG-------GGGAGGTCTCTGATTGGCCCTCAGTACGCAGGGTGGAG----ACCTTTCCTGCCCAGGGTGGAGCCACCCCACTGAGATTAACATTGGGCGATTCCCAACCGCTGACCTCAGACTCACCTTGACATCAcctgggccccatcctcagggattcagctgtaattgggctgcagtgggctttggggaagcactgcttgttgaatctccccaggtgaggttaatgtgcaATTCCCTTCCTAGACCACCGGGGTCAGGTGTGATAGGTGACAGAACAGGAAA-TACACATTTTGGATTTTGCAAGGTACCTGGCTCCCAGCTCTAGAAACGCTTGCAGAGa-aaaaaaattaaacaaaaataaataaattaaaattt---ttaaaaGAAGAGGATAAAAACTTTTGTGACTTCCTAAGTTACAAATAAAACAAGTCTACTTTGTggccaactgtggtggctcctgcctataaatcccagcaggccgagaggcctaggccaggagatctctaggggccaggagtttgagaccagcctaggcaacatagcaagatgcattctctacaaaaatatttaataattagccatgcataggctgggcgtggtagctcatgcctgtattcccagcactttgggaggccgaggtgggtgtatcacctaatgtcaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaaccctgtctc--------tactaaaaatac-aaaaattagccaggcgtggtagcgggtgcctctaatcccagctacttgggaggctgagacacgagaatcacttgaacccaggaggcagaggttgcagtgacgtgagatcacgccattgcactccagtctgggtgacaagagcaaga--ct-gtctcaaacaaaaacaagaac-aaaaaacattatccatacatgatggcctgcacctgtaatcccagctattcaggaggctgagctgggaggatgacctga------gcccaggagtttgaggctgcagtgagctgtgattgtgccaccccacttcagcctgggccacagag-gagaccctgtctcaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55745663 1082 + 59248254 CTTGCTTCCAGCCTGTATTTTCTGCAAAGGAACTGGATAAAAAG-------GGGAGGTCTCTGATTGGCCCTCAGTACGCAGGGTGGAG----ACCTTTCCTGCCCAGGGTGGAGCCACCCCACTGAGATTAACATTGGGCGATTCCCAACCGCTGACCTCAGACTCACCTTGACATCAcctgggccccatcctcagggattcagctgtaattgggctgcagtgggctttggggaagcactgattgttgaatctccccaggtgaggttaatgtgcaATTCCCTTCCTAGACCACCGGGGTCAGGTGTGATAGGTGACAGAACAGGAAA-TACACATTTTGGATTTTGCAAGGTACCTGGCTCCCAGCTCTAGAAACGCTTGCAGAGA-AAAAaaattaaacaaaaataaataaattaaaATTT---TTAAAAGAAGAGGATAAAAACTTTTGTGACTTCCTAAGTTACAAATAAAACAAGTCTACTTTGTggccaactgtggtggctcctgcctataaatcccagcaggccgagaggcctaggccagcagatctctaggggccaggagtttgagaccagcctaggcaacatagcaagatgcattctctacaaaaatatttaataattagccatgcataggctgggcgtggtagctcatgcctgtattcccagcactttgggaggccgaggtgggtgtatcacctgatgtcaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaaccctgtctc--------tactaaaaatac-aaaaattagccaggcgtggtagcgggtgcctctaatcccagctacttgggaggctgagacacgagaatcacttgaacccaggaggcagaggttgcagtgacgtgagatcacgccattgcactccagtctgggtgacaagagcaaga--ct-gtctcaaacaaaaacaagaac-aaaaaacattatccatacatgatggcctgcacctgtaatcccagctattcaggaggctgagctgggaggatgacctga------gcccaggagtttgaggctgcagtgagctgtgattgtgccaccccacttcagcctgggccacagag-gagaccctgtctcaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47851035 1082 + 51301725 CTTGCTTCCAGCCTGTATTTTCTGCAAAGGAACTGGATAAAAAG-------GGGAGGTCTCTGATTGGCCCTCAGTACACAGGGTGGAG----ACCTTTCCTGCCCAGGGTGGAGCCACCCCACTGAGATTAACATTGGGCGATTCCCAACCGCTGACCTCAGACTCACCTTGACATCACCTGGGCCCCATCCTCAGGGATTCAGCTGTAATTGGGCTGCAGTGGGCTTTGGGGAAGCACTGCTTGTTGAATCTCCCCAGGTGAGGTTAATGTGCAATTCCCTTCCTAGACCACCGGGGTCAGGTGTGATAGGTGACAGAACAGGAAA-TACACATTTTGGATTTTGCAGGGTACCTGGCTCCCAGCTCTAAAAATgcttgcagaga-aaaaaaattaaacaaaaataaataaattaaaattt---ttaaaagaagaggataaaaaCTTTTGTGACTTCCTAAGTTACAAATAAAACAAGTCTACTTTGTGGCCAactgtggtggctcctgcctataaatcccagcaggCCGAGAGGCCTAGGCCAGCAGATCTCTagggaccaggagtttgagaccagcctaggcaacatagcaagatgcattctctacaaaaatatttaataattagccatgcataggctgggcgtggtagctcatgcctgtattcccagcactttgggaggccaaggtgggtgtatcacctgatgtcaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaaccctgtctc--------tactaaaaatat-aaaaattagccaggcgtggtagtgggtgcctgtaatcccagctacttgggaggctgagacaggagaatcacttgaaccctggaggcagaggttgcagtgaggcgagagcacgccattgcactccagtctgggtgacaagagcaaga--ct-gtctcaaacaaaaacaaaaac-aaaaaacattatccATACATgatggcctgcacctgtagtcccagctattcaggaggctgaggtgggaggatgacctga------acccaggagtttgaggctgcagtgagctgtgattgtgccacctcacttcagcctgggccacagag-gagaccctgtctcaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47559868 1081 + 50890351 GTTGCTTCCAGCCTGTATTTTCTGCAAAGGAACTGGATAAAAAG-------GGGAGGTCTCTGATTGGCCCTCAGTACGCAGGGTGGAG----ACCTTTCCTGCCCAGGGTGGAGCCACCCCACTGAGATTAACATTGGGCGATTCCCAACCGCTGACCTCAGACTCACCTTGACATCAcctgggccccatcctcagggattcagctgtaattgggctgcagtgcgctttggggaagcacggcttgttgaatctccccaggtgaggttaatgtgcaATTCCCTTCCTAGACCACCAGGGTCAGGTGTGATAGGTGACGGAACAGGAAA-TACACATTGTGGATTTTGCAGGGTACCTGGCTCCCAGCTCTAAAAACGCTTGCAGAGA-AAAAaaattaaacaaaaataaataaattaaaATTT---TTAAAAAAAGAGGATAAAAACTTTTGTGACTTCCTAAGTTACAAATAAAGTAAGTCTACTTTGTggccaactgtggtggctcctgcctatagatcccaggaggccgagaggcctaggccagcggatccctaggggccaggagtttgagaccagcctaggcaacatagcaagatgcattctctacaaaaatatttaataattagccatgcataggctgggcgtggtagctcatgcctgtattcccagcactttgggaggccgaggtgggtggatcacctgagatcaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaaccctgtctc--------tactaaaaatac-aaaaattagccaggcgtggtagcgggtgcctctaatcccggctactcgggaggctgagacaggagaatcacttgaacccaggaggcagaggttgcagtgagatgagatcacgccattgcactccagtctgggtgacaagagcaaga--ct-gtctcaaacaaaaacaaaaac-aaaaaa-attatccatacatgatggcctgcacctgtaatcccagctattcaagaggctgaggtgggaggatgacctga------gcccaggagtttgaggctgcagtgagctgtgattgtgccacctcacttcagcctgggccacaaag-gagaccctgtctcaaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45913373 1021 + 49145316 CTTGCTTCCGGCCGGTGTTTTCTGCGAAGGACTTGGGTAATAAGAGGGTCAGGGAGCTCTGGGATTGG-CCTGGGGACCCGGGGTGGAGGCAGGTGTTTCCCGCCCAGGGTGGAGCTG-CCCACCGAGATTAACACTGCTTGGCTCCCAACCACTGACCTCAGACTAACCTTGACATCAcctgggccccatcctccgggattcagctgtcattgggctgcagtgggctttgggg-agcagggcttgctgaaagtccccaggtgaggttaatgtgcag-----TTCCTAGACCACCGAGGTCAGGTGTGATCGGCGACAGAACAGGACATTATACATTTTCAGTTTTATGGGGTCGCTGGCTCCCAGCTCCAAAAACTCATGTAAAGAGAAAAAAATTAAACGTAAATAAA-------TGTTTT---TTAAAAAAA---GATAAA----------------------------------------------ggccgggcgtcgtggctcacgcctgta-atcccagcactttgggaggccgaggcgggtggatcac--gaggtcaagagatcgagaccatcctggtcaacatggtgaaaccccgtctctactaaaaatacaaaaaatta-----------gctgggcatggtggtgcgtgcctgtaatcccagctactcgggaggctgaggcaggagaattgcctgaacccaggaggcggagattgcggtgagcagagatcgtgccattgcactccagcctgggtaacaagagcgaaactccgtctcaaaaacaaaaccaaaccaaaaaaagataaa--aaGTCTTGTGACG---gcctgtaatcccagcactttgggaggcggaagtgggtggatcac--gaggtcaggagttcaaga-------------------------------ccagtctggccaatatgatgaaac--ctcatctctactaaaaat-------acaaaa-attatctgggcatagtggcatgtgcccgtaatcccagctactcgggaagctgaggcaggagaatcgcttgaaccgggacctgggaggcggaggttacagtgagccaagattgagccacctcactccagcctgggctacagagaaagactccgtctcaaaaaga i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=6926.000000 s hg38.chr19_GL949747v2_alt 593758 11 + 729520 taaaTAGATAA---- s panTro4.chr19 59865695 11 + 63644993 taaaTAGATAA---- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60606509 7 + 64156825 ----taaataa---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55746745 7 + 59248254 ----taaataa---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47852117 7 + 51301725 ----taaataa---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47560949 7 + 50890351 ----taaataa---- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45914394 11 + 49145316 ----taaaaaaagaa i calJac3.chr22 C 0 I 7610 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56780386 1391 + 60714840 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=461783.000000 s hg38.chr19_GL949747v2_alt 593769 360 + 729520 CTGATATTTAA------tttttttttttggatggagtcttgctctgtggcccaggctggagtgcagtggtgcaatctccattc-ttgcaacctctgccttccaggttcaagcaattctgatgcctcagcttcccaagtagctgggactgcaggcacatgccaccatgcccaactaattttttgtatttttagtagagacagggtttcaccatattggtcaggctggtctcaaactcctgatgtcaggt--------------------------------gatTACAGGCATGAGCCACCGCACCTGGCCTAAAATTGTTTTTAAATAAAACAGTGTATGTTGTGGAAAGCATTCAGCACAGAATTTTGGTAGTTTAAACTGTTAATTTAATGGAAGCA s panTro4.chr19 59865706 361 + 63644993 CTGATATTTAA-----ttttttttttttggatggagtcttgctctgtggcccaggctggagtgcagtggtgcaatctcggttc-ttgcaacctctgccttccaggttcaagcaattctgatgcctcagcctcccaagtagctgggactgcaggcacatgccaccatgcccaactaattttttgtatttttagtagaggcagggtttcactatattggtcaggctggtctcaaactcctgatgtcaggt--------------------------------gatTACAGGCATGAGCCACCACACCTGGCCTAAAATTGTTTTTAAATAAAACAGTGTATGTTGTGGAAAACATTCAGCACAGAATTTTGGTAGTTTAAACTGTTAATTTAATGGAAGCA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60606516 392 + 64156825 CTGATATTTAA--TGttttttttttttgagatggagtctcgctctgtggtccaggctggaatgcagtagtgcagtctcagttcactgcaacctccgctccccaggttcaagcaattcttgtgcctcagcctcccgagtagctgggactgaaggcacacaccaccatgcctgactaattttttgtatttttagtagagacggggtttcaccatattggccaggctggtctcaaactcctgatgtcaggcaatccacccacctcggccttccaaagtgctgggattacaggcaggagccaccgcacctggccTAAAATTGTTTTTAAATAAAACAGCGTATGTTGTGGAAAGCATTCAGCACAGAATTTTGG-----TAAACTGTTAATTTAACGGAAGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55746752 394 + 59248254 CTGATATTTAAttttttttttttttttgagatggagtctcgctctgtggtccaggctggaatgcagtagtgcagtctcagttcactgcaacctccgctccccaggttcaagcaattcttgtgcctcagcctcccgagtagctgggactgaaggcacacaccaccatgcctgactaattttttgtatttttagtagagacggggtttcaccatattggccaggctggtctcaaactcctgatgtcaggcaatccacccacctcggcctcccaaagtgctgggattacaggcatgagccaccgcacctggccTAAAATTGTTTTTAAATAAAACAGCGTATGTTGTGGAAAGCATTCAGCACAGAATTTTGG-----TAAACTGTTAATTTAACGGAAGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47852124 392 + 51301725 cggatatttaa--ttttttttttttttgagatggagtctcgctctgtggtccaggctggaatgcagtagtgcagtctcagttcactgcaacctccgcttcccaggttcaagcaattctcgtgcctcagcctcccgagtagctgggactgcaggcacatgccaccatgcctgactaattttttgtatttttagtagagacggggtttcaccatattggccaggctggtctcgaactcctgatgtcgggtgatccacccacctcggcctcccgaagtgctgggattacaggcatgagccactgcacctggcctaaaattgtttttaaataaaacagtgtATGTTGTGGAAAGCATTCAGCACAGAATTTTGG-----TAAACTGTTAATTTAATGGAAGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47560956 391 + 50890351 CTGATATTTAA---tttttttttttttgagatggagtctcgctctgtggtctaggctggagtgcagtagtgcagtctcagttcactgcaacctccgcttcccaggttcaagcaattctcatgcctcagcctcccgagtagctgggactgcaggcacatgccaccatgcctgactaattttttgtatttttagtagagacggggtttcaccatattggccaggctggtctcaaactcctgatgtcaggcgatccacccacctcggcctcccgaagtgctgggattacaggcatgagccaccacacctggccTAAAATTGTTTTTAAATAAAACAGTGTATGTTGTGGAAAGCATTCAGCACAGAATTTTGG-----TAAACTGTTAATTTAATGGAAGCA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56780386 1391 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=917661.000000 s hg38.chr19_GL949747v2_alt 594129 559 + 729520 AATGGTCCCACAAATGAAGATGTATATATCAGTTGCAGCATGCCATCTATAGAAATAGGCACTATGGAggcctggcatggtggctcacacctgtaatccctgcactttggaaggctgaggcaggtggatcatctgaggtcagcagttcgagaccaacctgggcaacatggcaaaa-aa-cc----cctggctactaaaaat-aaagaattagccaggcatggtggtgtgcacctgtaatcccagctactcaggaggctgaggcgtaagaattgattgaacctgggagttggaggttgccgtgagccgagattgcaccactgcgctccagcctgggcgacagagactccatcttt------aaaaaaaaaaa------------aaaaagaTggccaggcgcagtggttcatgaatgtaatcccagcactttgggaggctgaggcgggaggactgcctgagtccaggagttcaagaccagcctgggcaatatggcgagactccctctctgaagaaaaagaaaaTAAAAACAATAAAAATAAATTATATTCTAGCTGAC--AAAA-----AGAGAGAGAGAGTATATTTTGTT s panTro4.chr19 59866067 569 + 63644993 AATGGTCCCACAAATGAAGATGTAAATATCAGTTGCAGCGTGCCATCTACAGAAACAGGCACTATGGAggcctggcatggtggctcatgcctgtaatccctgcactttggaaggctgaggcagctggatcatctgaggtcagcagttcgagaccaacctgggcaacatggcaaaa-aa-cc----cctggctactaaaaat-aaagaattagccaggcatggtggtgtgcacctgtaatcccagctactcaggaggctgaggcatgagaattgattgaacctgggagttggaggttgcagtgagccgagattgcaccactgcgctccagcctgggagacagagacaccatctttaaaaaaaaaaaaaaaaa------------aaaaagaTggccaggcgcagtggttcatgaatgtaatcccagcactttgggaggctgaggcaggaggactgcctgagtccaggagttcaagaccagcctgggcaatatggcgagactccctctctgaaaaaaaagaaaaTAAAAACAATAAAAATAAATTATATTCTAGCTGAC--AAAAA-AAGAGAGAGAGAGAGTATATTTTGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56781777 558 + 60714840 AATGGTCCCACAAATGAAGATGTATATATCAGTTGCAGCATGCCATTTATAGAGATAGACACTATGGAggctgggcacggtggctcatgcctgtaatccctgcactttggaaggctgaggcgggtggatcatctgaggtcaggagttcgagaccaacctgggcaacatggcaaaaccc-cc----cctggcaactaaaaat-aaaaaattagccaggcatggtggtgtgcacctgtaatcccagctactcaggaggctgaggcatgagaattgattgaacctgggaggcggaggttgcagtgagccgagattgcacgactgcgctccagcctgggcgacagagactccatctt---------aaaaaacaa------------aaaaaGATggccaggcgcaatggttcatgaatgtaatcccagcactttgggaggctgaggcgggaggactgcctgagtccaggagttcaagaccagcctgggaaatattgcgagactccctctctgaaaaaaaagaaaaTAAAAACAATAAAAATAAATTATATTCTAGCTGAC--AAAAA----AAAGAGAGAGAGTATATTTTGTT i ponAbe2.chr19 I 1391 C 0 s rheMac3.chr19 60606908 585 + 64156825 AACGGTCCCACAAATGGAGACGGATATATCAGCAGCAGCATGCCAGCTATAGAGACAGGCACTGTGGAggccggacacggtagctcacgcctgtaatccctgtacttcggaaggccaaggtgggtgtatcatctgaggtcaggagttcgagaccaacctgggcaacatgacaaaa-ca-ccccctcctcgctactaaaaat-aaaaaattagccaggcatggtgctatgcacctgtaatcccagctactcaggaggctgaggcatgagaattgattgaacctgggagccggagaatgcagtgagcccagattgtaccactgcactccagcctgggcgacagagactccatctt--aaaaaaaaaaaaaaaaaGAGAGAGAGAGAGAGAGATggccagccgcagtgattcacgaatggaatcccagcattttgggaggctgaggcgcgaggatggcctgagtccaggagttcaagaccagcctaagtgacatggtgagactccctctctgaaaaaaaagaaaaTAAAAACAATCAAAATAAATTCTATTCTAGCTGAC-AAAAAAAAAAAAAGAGAGAGAGTATATTTTGTT i rheMac3.chr19 C 0 I 308 s macFas5.chr19 55747146 582 + 59248254 AATGATCCCACAAATGGAGACGGATATATCAGCGGCAGCATGCCAGCTATAGAGACAGGCACTGTGGAggccggacacggtagctcacgcctgtaatccctgtacttcggaaggccaaggtgggtggatcatctgaggtcaggagttcgagaccaacctgggcaacatgacaaaa-ca-ccccctcctcgctactaaaaat-aaaaaattagccaggcatggtgctatgcacctgtaatcccagctactcaggaggctgaggcatgagaattgattgaacctgggagccggagaatgcagtgagcccagattgtaccactgcactccagcctgggcgacagagactccatctt----aaaaaaaaaaaaaaagagagagagagagaGAGATggccagccgcagtgattcacgaatggaatcccagcattttgggaggctgaggcgcgaggatggcctgagtccaggagttcaagaccagcctaagtgacatggtgagactccctctctgaaaaaaaagaaaaTAAAAACAATCAAAATAAATTCTATTCTAGCTGAC--AAAAAAAAAAAAGAGAGAGAGTATATTTTGTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47852516 579 + 51301725 AATGGTCCCACAAATGGAGACGGATATATCAGCGGCAGCATGCCAGCTATAGAGACAGGCACtgtggaggccgggcacggtagctcacgcctgtaatccctgtacttcggaaggccaaggcgggtggatcatctgaggtcaggagttcgagaccaacctgggcaacatgacaaaa-caccCCCCTCctcgctactaaaaat-aaaaaattagccaggcatggtgctatgcacctgtaatcccagctactcaggaggctgaggcatgagaattgattgaacctgggagccggaagatgcagtgagcccagattgtaccactgcactccagcctgggcgacagagactccatctt----aaaaaaaaaaaaaa----agagagagagagagatggccaGCTGCAGTGATTCACGaatggaatcccagcattttgggaggctgaggcgggaggatggcctgagtccaggagttcaagaccagcctgagtgacacggtgagactccctctctgaaaaaaaagaaaataaaaacaatcaaaataaattctattctagctgac--aaaaaaaaaaaagagagagagtataTTTTGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47561347 546 + 50890351 AATGGTCCCACAAATGGAGACGGATATATCAGCGGCAGCATGCCAGCTGTAGAGACAGgcactgtggaggccgggcacgg------------------cctg-------------------------agcatctgaggtcaggagttcgagaccaacctgggcaacatgacaaaa-ca-ccccctcctcgctactaaaaatgaaaaaattagccaggcatggtgctatgcacctgtaatcccagctactcaggaggctgaggcatgagaattgattgaacctggaaggcggaggttgcagtgagcccagattgcaccactgcactccagcctgggcgacagagactccatcttaaaaaaaaaaaaaaaaaaaaagagagagagagagagaTggccagtcgcagtgattcacaaatgtaatcccagcattttgggaagctgaggcacgaggatggcctgagtccaggagttcaagaccagcctgagcaacatggtgagactccctctctgaaaaaaaagaaaaTAAAAACAATGATAATAAATTCTATTCTAGCTGACCAAAAAAAAAGAGAGAGAGAGAGTATATCTTGTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=1378495.000000 s hg38.chr19_GL949747v2_alt 594688 782 + 729520 AAAACATTTGGCCTTTAGTCCTAGAGCAGCTATGGAGAGATAAACATGAAAGAGGTATCTCTTGTTATACATACCCAGGCCCTGCAACCACACCTGAGtttatgtaaatgaggtgacttttggaaagcccctagataaccccacaagtgcgagggactggctgccaaagaaaccgtcagtgattagacattgggaactttcagccccaggctccaagtggcctccagggaggggagaggggctgaaggttgaattgattatgaactgccagctatgtg---atcagcattgcccacctaaggaatcctccataaaccccaaaagaaaagggtttgggccgggtgtcctgtggctcatgcccgtaatcccaacgctttggg--aggcctagatgggaggattgcttgagcccaagaattctaggccagtctggacaaaatagcaagaccctggctctac----aaaaaataaaaaattagccaggcgtggtggagtgcacctgtagacccagctactcaggaggctgaggcatgagaatcacttgaacgcaggagacagaggctgcagtgagctgagatagcgccactgcactccagcctgggtgacggagttagactgtctc-------------aaaaaa-----aaaaaaaaccaggaaagagttcagaagagcttcctggttggtgaacccgggtgcattcgtgtgccaggactgtggtgcaccccaggtccacagggacagaagctcctgcacttcggactcctctaaacctccccctacgcatctcttccttggctgttcattt s panTro4.chr19 59866636 793 + 63644993 AAAACATTTGGCCTTTAGTCCTAGAGCAGCTATGGAGAGATAAACATGAAAGAGGTATCTCTTGTTATGCATACCCAGGCCCTGCAACCACACCTGAGtttatgtaaatgaggtgacttttggaaagcccctagataaccccacaagtgcgggggactggctgccaaagaaaccatcagtgattagacattgggaactttcagccccaggctccaagtggcctccagggaggggagaggggctgaaggttgaattgattatgaactgccagctatgtg---atcagcattgcccacctaaggaatcctccataaacctcaaaagaaaagggtttgggccgggcgtcatttggctcatgcctgtaatcccaacactttgggtagggcctagatgggaggattgcttgagcccaagaattctaggccagtctggacaaaatagcaagaccctggctctac----aaaaaataaaaaattagccaggcgtggtggagtgcacctgtagacccagctactcaggaggctgaggcatgagaatcacttgaacgcaggaggcagaggctgcagtgagctgagatagcgccactgcactccagcctgggtgacggagttagactgtctc-aaaaaaaaa---aaaaaa-----aaaaaaaaacaggaaagagttcagaagagcttcctggttggtgaacccgggtgcatccgtgtgccaggactgtggtgcaccccaggtccacagggacagaagcttctgcactttgggctcctctaaacctccccctacgcatctcttccttggctgttcattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56782335 799 + 60714840 AAAACATTTGGCCTTTAGTCCTAGAGCAGCTATGGAAAGATAAACATGAAAGAGGTATCTCTTGTTTTGTATACCCAGGCCCTACAACCACATCTGAGCttatgttaatgaggtgacttttggaaagcccctagataaccccacaagggcgggggactggctgccaaagaaaccgtcagtgattagacattgggaactttcagccccaggctccaagtggcctccagggaggggagaggggctgaaggttgaattgattatgaactgccagctatgtg---atcagcattgcccacctaaggaatcctccataaaccccaaaagaaaagggtttgggccgggcatcatgtggctcatgcctgtaatcccaacactttggg--aggcctagatgggaggactgcttgagcccaagaattctagaccagtctggacaaaatagcaagaccctggctctac----aaaaaataaaaaattagccaggcgtggtggagtgcacctgcagacccagatactcaggaggctgaggcatgagaatcacttgaacgcaggaggcagaggctgcagtgagctgagatagcgccactgcactccagcctgggtgacggagtgagactgtctc-aaaaaaaaaaacaaaaaacaaacaaaaaaaaacaggaaagagttcagaagagcttcctggttggtgaatcggggtgcatccgtgtgccaggactatggtgcaccccaggtccacagggacagaagctcctgcacttgggactcctctaaacctcctcctgtgcatctcctccttggctgttcattt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60607801 786 + 64156825 aaaGCATTTGACCTTTAGTCCTAGAGCAGCTATGGAGAGAGAAAGGTAAAAGAGGTATCTCTTGTTATGCATGGCCAGGCCCTCCAACCACACCTGAGtttatgttaacgaggtgatttttggaaagcccctagataaccccacaagggcgggggactggctgccgatga------caacgattagacattaggaactttcagccccaggctccaagtgtcctccagggaggggagaggcgccgaaggttgaattgattatgaactgccagctatgtgatcatcagcatagcccacctaaggaatcctccagaaactccaaaaggaaagggtttgggccgggcgtcctgtggctcatgcctgtaatcccaacactttggg--aggcctagatgggaggattgcttgagcccaagaattctagaccagtctggacaagatagcaagaccctagctctac--aaaaaaaatgaaaaatgagccaggcatggtggagtgcacctgtggaccccgctactcaggaggctgcggtgtgagaatcacttgaacgcaggaggcagaggctgcagtgagttgagatcacgccactgcactccagcctgggtgacggagtgagactgtctc-----aaaaa---aaaaaa-----aaacaaaaacacgaaagagttcagaagagcttcctggttggtgaactggggtgcacccatgtgccaggactgtggtgcaccccaggcccacagggacagaaactcctgcactcgggactcctctgaacctcccccaatgcatctcctccttcactgttcattt i rheMac3.chr19 I 308 C 0 s macFas5.chr19 55747728 791 + 59248254 AAAGCATTTGACCTTTAGTCCTAGAGCAGCTATGGAGAGAGAAAGGTAAAAGAGGTATCTCTTGTTATGCATGGCCAGGCCCTCCAACCACACCTGAGtttatgttaacgaggtgatttttggaaagcccctagataaccccacaagggcgggggactggctgccgatga------caacgattagacattaggaactttcagccccaggctccaagtgtcctccagggaggggagaggctccgaaggttgaattgattatgaactgccagctatgtgatcatcagcatagcccacctaaggaatcctccagaaactccaaaaggaaagggtttgggccgggcgtcctgtggctcatgcctgtaatcccaacactttggg--aggcctagatgggaggattgcttgagcccaagaattctagaccagtctggacaagatagcaagaccctagctctac--aaaaaaaatgaaaaattagccaggcatggtggagtgcacctgtggaccccgctactcaggaggctgcggtgtgagaatcacttgaacgcaggaggcagaggctgcagtgagttgagatcacgccactgcactccagcctgggtgacggagtgagactgtctcaaaaaaaaaa---aaaaaa-----aaaaaaaaacacgaaagagttcagaagagcttcctggttggtgaactggggtgcacccatgtgccaggactgtggtgcaccccaggtccacagggacagaaactcctgcactcgggactcctctgaacctcccccaatgcatctcctccttcactgttcattt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47853095 770 + 51301725 AAAGCATTTGACCTTTAGTCCTAGAGCAGCTATGGAGAGAGAAAGGTAAAAGAGGTATCTCTTGTTATGCATGGCCAGGCCCTCCAACCACACCTGAGTTTATGTTAACGAGGTGATTTTTGGAAAGCCCCTAGATAACCCCACAAGGGCGGGGGACTGGCTGCCGATGA------CAACGATTAGACATTAGGAACTTTCAGCCCCAGGCTCCAAGTGGCCTTCAGGGAGGGGAGAGGCGCTGAAGGTTGAATTGATTATGAACCGCCAGCTATGTG---ATCAGCATTGCCCACCTAAGGAATCCTCCAGAAACTCCAAAAGGAAAGGGTTTGGGCCGGGCAtcatgtggctcatgcctgtaatcccaacactttggg--aggcctagatgggaggaatgcttgagcccaagaattctagaccagtctggacaaaatagcaagaccctggctctacaaaaaaaaaatgaaaaattagccaggcatggtggagtgcacctgtggacccagctactcaggaggctgaggcgtgagaatcacttgaacgcaggaggcagaggctgcagtgagttgagatcacgcca--------cagcctgggtgacggagtgagactgtctc---------------aaaa-----aaaaaaaaacacgaaagaGTTCAGAAGAGCTTCCTGGTTGGTGAACCGGGGTGCACCCATGTGCCAGGACTGTGGTGCACCCCAGGTCCACAGGGACAGAAACTCCTGCACTCGGGACTCCTCTAAACCTCCCCCAATGCATCTCCTCCTTCGCTGTTCAttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47561893 783 + 50890351 AAAGCATTTGACCTTTAGTCCTAGAGCAGCTATGGAGAGAGAAAAGTGAAAGAGGTATCTCTTGTTATGCATGGCCAGGCCCTACAACCACACCTGAGtttatgttaacgaggtgatttttggaaagcccctagataaccccacaatcgcgggggactggctgccgatga------cagcgattagacattaggaactttcagccccaggctccaagtggcctccaggaaggggagaggcgctgaaggttgaattgattatgaaccgccagctatgtgatcatcagcatagcccacctaaggaatcctccataaactccaaaaggaaaaggtttgggccgggcgtcatgtggctcatgcctgtaatcccaacactttggg--aggcctagatgggaggattgcttgagcccaagaattctagaccagtctggacaaaatagcaagaccctggctctac-aaaaaaaaatgaaaaattagccaggcgtggtggagtgcacctgtggacccagctactcaggaggctgaggcgtgagaatcacttgaatgcaggaggcacaggctgcagtgagttgagatcacgccactgcactccagcctgggtgacggagtgagactgtctc---------a---aaaaaa-----aaaaaaaaacatgaaagagttcagaagagcttcctggttggtgaaccggggtgcacccatgtgccaggactgtggtgcaccccaggtccacagggacagaaactcctgcactcgggactcctctaaacctcccccaatgcatctcctccttcgctgttcattt i chlSab2.chr6 C 0 I 2884 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=20176.000000 s hg38.chr19_GL949747v2_alt 595470 16 + 729520 gtatcctttaaaatat s panTro4.chr19 59867429 16 + 63644993 gcatcctttaaaatat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56783134 16 + 60714840 atatcctttaaaatat i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60608587 16 + 64156825 acatcctttaaaatat i rheMac3.chr19 C 0 I 3003 s macFas5.chr19 55748519 16 + 59248254 atatcctttaaaatat i macFas5.chr19 C 0 I 2920 s papAnu2.chr19 47853865 16 + 51301725 atatcctttaaaatat i papAnu2.chr19 C 0 I 5245 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47562676 2884 + 50890351 I a score=178653.000000 s hg38.chr19_GL949747v2_alt 595486 735 + 729520 gaaagggcgggttgcccctccacacctgtgggcatttctcgttaggtggaaggagagacttggaaaagaaagagacac--agacaaagtatagagaaagaaataaggggacccaggggaccagcattcagcatatggaggatcccgccagcttctgagttcccttagtatttattgatcattttggggtgtttctcagagagggggatgtggcagggtcataggataatagtggagggaaggtcagcagataaacacgttaacaaaggtctctgcatcatagacaaggtaaagaactaagtgctgtgctttagatatgcatacacataaacatctcaatgccttacggagcagtattgctgcccgcatgtcccacctccagccctaaggcggttttcccctatctcagtatatggaatatacaatcggggtttacacccatacattccattgcccagggacgagcaggagacagatgccttcctcttgtctcaactgcaaagaggtgttccttcctcttttactaatccgcctcagcacagaccctttactggtgtcgggctgagggacggtcaggtctttcccttcccatgagaccata--tttcaggctatcacatggggagaaaccctggacaatacctggct--ttcctaggcagaggtccctgcggccttccgcagtgtttgt--gtccctgggtacttgagattagggagtggtga-tgactcttaaggagcatgctg s panTro4.chr19 59867445 735 + 63644993 gaaagggcaggttgcccctccacacctgtgggcatttctcgttaggtggaaggagagacttggaaaagaaagagacac--agacaaagtatagagaaagaaaaaagggggcccaggggaccagcgttcagcacacggaggatcccgccagcttctgagtttccttagtatttattgatcattttggggtgtttctcggagagggggatgtggcagggtcataggataatagtggagagaaggtgagcaggtaaacacataaacaaaggtctctgcatcatagacaaggtaaagaactaagtgctgtgctttagatatgcacacgcataaacatctcaatgccttacagagcagtattgctgccctcaagtcccacctccagccctaaggcggttttcccctatctcagtagatggaatatacaatcggggtttacacccatacattccattgcccagggacgagcaggagacagatgacttcctcttgtctcaactgcaaagaggtgttccttcctcttttactaatcctcctcagcacagaccctttacgggtgtcgggctgggggacggtcaggtctttcccttcccacaaggccata--tttcaggctatcacatggggagaaaccctggacaatacctggct--ttcctaggcagaggtctctgcggccttccgcagtttttgt--gtccctgggtacttgagattagggagtggtga-tgactcttaaggagcatgctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56783150 741 + 60714840 gaaggggtgggttgcctctccacacctgtgggcatttctcgttaggtggaacaagagacttggaaaagaaagagacacagagacaaagtatagagaaagaaaaaagggggcccaggggagcggcgttcagcacacggaggatccc-caggcctccgagttcccttagtatttattgatcattcttcagtgtttctcggagaggaggatgtggcaggatcacaggataatagtggagagagggtcagcaggtgaacacgtgaacaaagg--tctgcatcatagacaaggtaaagaattcagtgctgtgctttagatatgtatacacataaacatctcagtgccttgaagagcagtattgctgccctcatgtcccacctccagccctaaggctgttttcccctatctcagtagatggaatatacaatcggggtttacacccagacattccattgcccagggacgagcaggagacagatgccttcctctggcctcaactgcaaagaggccttcctttctcttctactaatcctcctcagtacagaccctttacgggtgttgggctgggggacggtcagatctttcccttcccaggaggccatatctctcaggctatcacatggggagaaaccttggacaatacctggctaagggcaaggcagaggtccctgcggccttccgcagtgttttttaatcgctgggtacttgaaattagggagtggtgagtgactcttaactagcatgctg i ponAbe2.chr19 C 0 I 7626 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47562676 2884 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e macFas5.chr19 55748535 2920 + 59248254 I e rheMac3.chr19 60608603 3003 + 64156825 I a score=314621.000000 s hg38.chr19_GL949747v2_alt 596221 3528 + 729520 ccttcaagcatttgtttaacaaagcacatcttgcacagcccttaatccatttaaccctgagtggacacagcacatgtttcagagagcacagggttgggggtaaggtcatagattaacagcatctcaaggcagaagaatttgtcttagtacagaacaaaatgaagtctcctgtgtctacttctttctacacagacacagttacaatctgatctctctttcttttccccacaAAAATATCCTTTGTAgaccaggcacagtggctcaggcctgtaatcccagcactttgggaggctgaggcagatggatcacttaaggtcaggagtttgagaccagcccagccagcatggtgaaactgcgtctctacaaaaatacaaaaattagcggggcatggtagttcaacgcctgtaatcccagctactcgagaggctgaggcagaattgtttgaacccgggaggcagaggcagaggttgcagtgagccgaggtcgcacgactgcactccagcctgggtgcaacagagtgagactccatctcaaaaaacaaaaaacaaaaacaaaaacaaaacaaaaaatgaaaacccacttttagtaaaaaaaataaaaatgaaaaaatgtgaatcaggctgcactctggcccacatcctggctgctgtgtatcacgtggctctagacactgcacttttgcctcctcatcattgctgtagataggatttctgacagcagggtcattagacgaa--tttttttttttttttgagacggagtctcgctctgtcgcccaggctggagggcagtggcgcaatctctgctcactgcaagctccgcctcccgggttcacacaattctcctgcctcagcctcccgaatagctgggactacaggtgcctgcaaccatgcctggctaattttttttgtatttttagtagagacgcggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatcctcccgcctaggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccccattagacaaatttgtatctgcacggttcctacagataaactctgggacattagaattataaggcttttgtttaaggatggtttcagatgtttttcagaccttgaattccagccaaatagctgacactaaccagtttgaagaccccagtgaggaatgggatcagcatgagaacactgcgtcttcatgcccctgtctccgccagcagtcagcatggccacactctggcccacaccaaaacacttaaaaaccctagccccggccgggtgcagaggctcacacctgtaactccagcactttgggaggccaaggcaggtgaatcacctgaggtcaagagttcaagaccagcctggccaacatagtgaaaccccgtttctactaaaaacacaaaaaattagtcgggcgtggtagcgggtgcctgtaaccccagctactcaggaggctgaggcaagagaattacttgaacctgggaggcggaggttgcagtgagcaaagatcctgccactgcactccagcctgggtgacaaagcaaaactccatctcaaaaa--aaaaaaaaaccctagacccaaacttctgggggagatggattggaggtttcctcccatctcctcattcctcagccctgtgattaaacttccttctcttctgcaacacagtgacccggcaaattgactcacagcgtgcattgggcaacggacctactgtcagaggcgtgtaaccagggcaactccatcttgaataggagctgactaaaataaggctgagacctaccgggctgcattcccagacagttaaggcattctcca--------aaaaaaacaaaaatgacaggcacggtggcccagcactttgggaggccgaggcgggtggattacccgaagtagagtttgagaccagcctggccaacacggtgaaaccccgtctctactgaaaatacaaaaattagtcaggcgtggtggctcgtgcctgtaatcccacctacttgcgaggctgaggcaggagaatcgcttgagccggggaggcggaggttgcagtaaaaag-aaaaaaaaaagcattctaagtcacaggatgagataagtcagcacaagatacaggtcataaggaccttgctgataacacaggtagcaatgtagcaggaccagccacagacaaaactcctcagacaccgagttaaagaagaaaggggtttatccggccaggggcatcggcaagactcccgtctcaagagccgagatccccaagtgagcaattcctgtcccttttaagggctcacaactctaagggggtgtgcgtgagagggtcgtgatcgactgagcaagcagggggtacgtgactgggggctgcatgcactggtaatcagatccaaacaaaacaggatagggattttcacagtgcttttctatacaatgtctgtaatctatagataaccgattaggtcaggggtcaatctttaactaccaggcccagggtgtggcgccgggctgtctgcttgtggatttcattcctgggccgcggggc------------------------------------tgtctgcttgtggatttcattcctggggcgcggggctgtctgcttgtggatttcatttctgccttttagtttttactttttctttctttggaggtggaaattgggcataagacaatatgaggggtggtctcctcccttagcaataaagaatccagccaggccgggcgcggtggctcacacctgtaatcccagcactttcgggggctgaggcgggtggatcacacggtcaggagattgagaccatcctggctaacacggtgaaa--ccatctctactaaaaaaaaaaaatacaaaaaattagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaacggcgtgaacccgggtgatggagcttgcagtgagcggagatcgcgccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaataaaaaataaataaaaataaataaagcatccagtcaaactccatcaaaaccaagatagtgacgagagtaacctctggttgtcctcaccgctccactcccagcagccccatgacagtttacaaatgccatggcaatgtcaggaagttaccctatgctgtctaaaaaggggaggcatgaataatccaccccttgtttagcatatccatagaaataaccataaaaatgggcaaccggccgggcgcggtgg-tcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcatgaggtcaggagattgagaccatcctggctaacacggtgaaatcccatctctactaaaaaaaaatacaactaattagctgggtgcggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcctgaacccaggaggcggagcttgcagtgagccgagatagtgccactgcactctggcctggtgaaagagcgagactccgtctcaaaaaaaaaaaaaaaaaaa s panTro4.chr19 59868180 3545 + 63644993 ccttcaagcatctgtttaacaaagcacaccctgcacagcccttaatccatttaaccctgagtggacacagcacatgtttcagagagcacggggttgggggtaaggtcatagattaacagcatctcaaggcagaagaatttgtcttagtacagaacaaaatggagtctcctgtgtctacttctttctacacagacacagttacaatctgatctctctttcttttccccacaAAAATATCCTTTGTAgaccaggcacagtggctcaggcctgtaatcccagcactttgggaggctgaggcagatggatcacttaaggtcaggagtttgagaccag-ccagccaacatggtgaaactgcgtctctacaaaaatacaaaaattagccgggcatggtagctcaatgcctgtaatcccagctactcgagaggctgaggcagaattgtttgaacctgggaggcagaggcagaggttgcagtgagccgagatcgcacgactgcactccagcctgggtgcgacagagtgagactctatctcaaaaaac------taaaaacaaaaacaaaacaaaaaaTGAAAACCCGCttttagtaaaaaaaataaaaatgaaaaaatgtgaatcaggctgcactctggcccacgtcctggctgctgtgtatcacgtggctctagacactgcacttttgcctcctcatcattgctgtagataggatttctgacagcagggtcattagatgaatttttttttttttttttgagacggagtctcgctctgtcgcccaggctggagtgcaatggcgcaatctctgctcactgcaagctccgcctcctgggttcacacaattctcctgcctcagcctcccgaatagctgggactacaggtgcctgcaacaatgcccggctaattttttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccccattagacgaatttgtatctgcacggttcctacagataaactctgggacattagaattataaggcttttgtttaaggatgg-----------tttcagaccttgaattccagccaaatagctgacactaaccagtttgaagaccccagcgaggaatgggatcagcatgagaacaccgcgtcttcatgtccctgtctccgccagcagtcagcatggccacactctggcccacaccaaaacacttaaaaaccctagccctggccgggtgcagaggctcacacctgtaactccagcactttgggaggccaaggcaggtgaatcacctgaggtcaagagttcaagaccagcctggccaacatagtgaaaccccgtttctactaaaaacacaaaaaattagtcgggcgtggtagcgggtgcctgtaaccccagctactcaggaggctgaggcaagagaattacttgaacctgggagggggaggttgcagtgagcaaagatcctgccactgcactccagcctgggtgacaaagcaaaactccatctcaaaaaacaaaaaaaaaccctagacccaaacttctggggcagatggattggaggtttcctcccatctcctcattcctcagtcctgtgattaaacttccttctcttctgcaacacagtgacccggcaaattgactcacagcgtgcattgggcaacggacctactgtcagaggcgtgtaaccagggcaactccatcttgaataggagctgactaaaataaggctaagacctaccgggctgcattcccagacagttaaggcattctccaaaaaaaacaaaaaaacaaaaatgccaggcacggtggcccagcactttgggaagccgaggcaggtggattacccgaagtagagtttgagaccagcctggccaacatggtgaaaccccgtctctactgaaaatacaaaaattagtcaggcgtggtggctcgtgcctgtaatcccagctacttgcgaggctgaggcaggagaatcgcttgagccggggaggcggaggttgcagtaaaaagaaaaaaaaaaagcattctaagtcacaggatgagataagtcagcacaagatacaggtcataaggaccttgctgataacacaggtcgcaatgtagcaggaccagccacagacaaaactcctcagacaccgagttaaagaagaaaggggtttattcggccaggggcatcggcaagactcccgtctcaagagccgagatccccaagtgagcaattcctgtcccttttaagggctcacaactctaagggggtgcgcgtgagagggtcgtgatcgattgagcaagcagggggtacgtgactgggggctgcatgcaccggtaatcagatccaaacaaaacaggatagggattttcacagtgcttttctatacaatgtctgtaatctatagatgaccgattaggtcaggggtcaatctttaactaccaggcccagggtgtggcgcggggctgtctgcttgtggatttcattcctggggcgcggggctgtctgcttgtggatttcattcctggggcgccgggatgtctgcttgtggatttcattcctggggcgcggggctgtctgcttgtggatttcatttctgccttttagtttttactttttctttctttggaggtggaaattgggcataagacaatatgaggggtggtctcctcccttagcaataaagaatccagccaggccgggcgcggtggctcacgcctgtaatcccagcactttggggggccgaggcgggcggatcacaaggtcaggagattgagaccatcctggctaacacagtgaaaccccgtctctact-------aaaaatacaaaaaattagccgggcttggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggtgatggagcttgcagtgagccgagatcgcgccaccgcactccagcctgggtgacagagcaagactccgtctcaaaaaaataaaaaat------aaataaataaagcatccagtcaaactccatcaaaaccaagatagtgacgagagtaacctctggttgtcctcaccgttccactcccagcagccccatgacagtttacaaatgccatggcaatgtcaggaagttaccctatgcggtctaaaaaggggaggcatgaataatccaccccttgtttagcatatccatagaaataaccataaaaatgggcaaccggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggcc-aggcgggtggatcatgaggtcaggagattgagaccatcctggctaacacggtgaaaccccatctctact-aaaaaaaatacaacaaattagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggttgaggcaggagaatggcctgaacccaggaggcggagcttgcagtgagccgagatagtgccactgcactctggcctggtgaaagagcgagactccgtctc--aaaaaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56783891 7626 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47562676 2884 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e macFas5.chr19 55748535 2920 + 59248254 I e rheMac3.chr19 60608603 3003 + 64156825 I a score=174656.000000 s hg38.chr19_GL949747v2_alt 599749 235 + 729520 aaaaaGGGCAACCGAggccggacgtggtggcttacgcctgtaatcccaacactttgggaggccgaggcgggcatatcacctgagctcaggaggtcaagatcagcctggccaacatggtgaaaccccatctcttactaaaaatacaaaaattagccagacgtgatggcaggcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaactgaagtgattcaag s panTro4.chr19 59871725 235 + 63644993 aaaaaGGGCAACCAAggccggacgtggtggcttacgcctgtaatcccaacactttgggaggccgaggcgggcatatcacctgagctcaggaggtcgagatcagcctggccaacatggtgaaaccccatctcttactaaaaatacaaaaattagccagacgtgatggcaggcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaactcaagtgattcaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56791517 228 + 60714840 aaaatgggcaaccaaggctgggcttggtggctcactcctgtaatcccaacacttcaggaggctgaggcgggcagatcacctgaggtcaggaggtcgagatcagcctggccaacatggtgaaaccccatctcttactaaaaatacaaaaattagccagacctgatggcaggcgcctgtaatcccagctactcaggaggccgaggcaggagaatcacttgaacccagg-------aa i ponAbe2.chr19 I 7626 C 0 s macFas5.chr19 55751455 221 + 59248254 aaaatgggcaaccaaggctgggtgtggtggctcacgcctgtgatcccaaccctttcagaggcctacacaggtggatcacctgaggtcaggaggtcgagatcagcctggccaacatggtgaaaccccatctcttactaaaaataaaaaaattag-------tgatggcgcgcgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccggg-------ag i macFas5.chr19 I 2920 C 0 s chlSab2.chr6 47565560 221 + 50890351 aaaatgggcaaccaagaccgggtgtggtggctcatgcctggaatcccaacactttcagaggcctatgcaggcagatcacctgaggtcaggaggtggacatcagcctggccaacatggtgaaacctcatctcttactaaaaatacaaaaattag-------tgatggcaggcgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccagg-------ag i chlSab2.chr6 I 2884 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e papAnu2.chr19 47853881 5245 + 51301725 I e rheMac3.chr19 60608603 3003 + 64156825 I a score=331917.000000 s hg38.chr19_GL949747v2_alt 599984 283 + 729520 gcagaggtttcagtgagccaagatcacgccactgcactccagcctgggcgacaagagcaaaactccatctc--aaaaaaaataagggcaactagcagccctatgggctgctgtctatggagtagctattcttttactccttcactttcctaataagcttgcttccactttactccatagtctcgccctgaattctttctggtatgagattcaagaacccACCATGCCCAGCTCGTCCTTACTTGCTTTTAAAAAATATCATTGGTggccgggcgcggtggctcac s panTro4.chr19 59871960 283 + 63644993 gcagaggtttcagtgagccaagatcacgccactgcactccagcctgggcgacaagagcaaaactccatctc--aaaaaaaataagggcaaccagcagccctatgggctgctgtctatggagtagctattcttttactccttcactttcctaataagcttgctttcactttactccatagtctcgccctgaattctttctggtatgagattcaagaacccACCATGCCCAGCTCGTCCTTACTTGCTTTTAAAAAATATCATTGGTggccgggcgcggtggctcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56791745 282 + 60714840 gcagaggttgcagtgagccaagatcacaccattgcact-cagccggggcgacaaaagcaaaactccatctc--aaaaaaaataagggcaaccaggagccctacgggctgctgtctatggagtagctattcttttactccttcactttcctaataagcttgctttcactttactccatgatcttgccctgaattctttctggcatgagattcaagaacccACCATGCCCAGCTCGTCCTTACTTGCTTTTAAAAAGTATCATTGCTggccgggcgcggtggctcac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60611606 274 + 64156825 gcagaggttgcagtgagccgagatcgcgccattgcactccagtcttggcaataagagtaaaactccctctcaaaaaaaaaataagggcaaccagcagccc-----------gtctatggagtagctattcttttattcgttcactttcctaataagcttgctttcactatactccatggacctgccctgaattctttctggcgtgagattcaagaacccactATGCCCAGCCCATCCTTACTTGCTTTTAAAAAGTATCATTGGTGgctggacatggtggctcac i rheMac3.chr19 I 3003 C 0 s macFas5.chr19 55751676 274 + 59248254 gcagaggttgcagtgatctgagatcacgccattgcactccagcctgggcaacaagagcaaaactccatctcaaaaaacaaataagggcaaccagcagccc-----------gtctatggagtagctattcttttattcgttcactttcctaataagcttgctttcactatactccatggacctgccctgaattctttctggcgtgagattcaagaacccactATGCCCAGCCCATCCTTACTTGCTTTTAAAAAGTATCATTGGTggctggacaccgtggctcac i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47565781 274 + 50890351 gcggaggttgcagtgatctgagatcacgccattgcactccagcctgggcaacaaaagcaaaactccatctccaaaaaaaaataaaggcaactagcagccc-----------gtctgtggagtagctattcttttattccttcactttcctaataagcttgctttcactatactccatggacctgccccgaattctttccggcgtgagattcaagaacccactATGCCCAGCCCATCCTTACTTACTTTTAAAAAGTATCATTGGTggccggacacagtggctcac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e papAnu2.chr19 47853881 5245 + 51301725 I a score=110530.000000 s hg38.chr19_GL949747v2_alt 600267 136 + 729520 gcctgcaatcccagcactttgggaggccaaggctggcggatcacctgaggtccgaagtttgagaccagcctgaccaacatggagaaaccccgtctctactaaaatac-aaaaaaattagctgggtgtggtggtgcgt s panTro4.chr19 59872243 136 + 63644993 gcctgcaatcccagcactttgggaggccaaggctggcggatcacctgaggtccgaagtttgagaccagcctgaccaacatggagaaaccccgtctctactaaaatac-aaaaaaattagctgggtgtggtggtgcgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56792027 137 + 60714840 gcctgtaatcccagcacttcaggaggccaaggctggcagatcacctgaggtcagaagttcgagaccagcctgaccaacatggagaaaccccgtctctactaaaatacaaaaaaaattagctgggcgtggtggcacgt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55751950 137 + 59248254 gcttgtaatcccagcactttgggaggacaaggcgagcggatcacctgaggtcagatgttcaagaccagcctgaccaacatggagaaactccatctgtactaaaatacaaaaaaaatcagctggctgtggtggtgcat i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47566055 137 + 50890351 gcctgtaatcccagcactttcggaggccaaggcgggcggatcacctgaggtcagacgttcgagaccagcctgaccaacatggagaaaccccatctgtactaaaatacaaaaaaaattagctgggtgtggtggtggat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e papAnu2.chr19 47853881 5245 + 51301725 I e rheMac3.chr19 60611880 0 + 64156825 C a score=172977.000000 s hg38.chr19_GL949747v2_alt 600403 145 + 729520 gcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccgggtggcagaggttgcagtgagccaagatcatgccattgcactccagcctgggcaacaagagtgaaactccgtctcaa------------------------------------aaataaataaataaa s panTro4.chr19 59872379 145 + 63644993 gcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccgggtggcagaggttgcagtgagccgagatcacgccattgcactccagcctgggcaacaagagtgaaactctgtctcaa------------------------------------aaataaataaataaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56792164 157 + 60714840 gccggtaatcccagctactcgggaggctgaggcaggagaatcacttgaaccccggtggcagaggttgcagtgagccgagatcatgccattgcactccaacctgggcaacaagagtgaaactctgtctcaa------------------------aaataaataaataaataaataaataaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60611880 145 + 64156825 gcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggtggcagtgagccgagatcgcaccactgcactccagcctgggcaacaagagtgtaactccatctcaa------------------------------------aaataaataaataaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55752087 181 + 59248254 gcctgtaattccagctacttgggaggctgaggcaggagaatcacttgaacctgggaggcggaggtggcagtgagccgagatcgcaccactgcactccagcctggacaacaagagtgaaactgcatctcaaaactaaataaataaataaataaataaataaataaataaataaataaataaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47566192 144 + 50890351 gcctgtaattccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggtggcagtgagccgagagcgcaccactgcactccagcctgggcaacaagagt-taactccatctcaa------------------------------------aaataaataaataaa i chlSab2.chr6 C 0 I 1756 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e papAnu2.chr19 47853881 5245 + 51301725 I a score=175847.000000 s hg38.chr19_GL949747v2_alt 600548 222 + 729520 aTCATTGGAATAATTTTCTTCTTTAGGAAGAGCAGCCTTGggccaggcatggtggcacatgcctggaatccccgaactttgggcagcccaggtaggtggattgcttgagtt----------caagagttccagaccagcctggacaacatgatgaaacctcttcttgatcaaatatacagaatttcgactgagcacagtggctgtaagcccagcatgttgggaagctgaggt s panTro4.chr19 59872524 222 + 63644993 aTCACTGGAATAATTTTCTTCTTTAGGAAGAGCAGTCTTGggccaggcatggtggcacatgcctggaatccccgaactttgggaagcccaggcaggtggattgcttgagtt----------caagagttccagaccagcctggacaacatgacgaaacctcttcttgatcaaatatacaaaaTTTCGACTGAGCACAGTGGctgtaagcccagcatgttgggaagctgaggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56792321 222 + 60714840 ATCATTGGAATAATTTTCTTCTTTAGGAACAGCAGCCTTGggccaggcatggtggcacatgcctggaatcccagaactttgggaagcccaggcaggtggattgcttgagtt----------caagagttccagaccagcctggacaacatgacaaaacctcttctccatcaaatatacaaaatttcgactgagcacagtggctgtaatctcagcacattgggaagccgaggt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60612025 229 + 64156825 aTCAGTGGAATAATT---TTCTTTAGGAAGAGCAGCCTTGAgccaggcatggtggcacatgcctggaatcccaggactttgggaagcccaggcaggtggattgcttgagcttccacctgcctgggagttccagaccagcctgaacaacatgacaaaacctcatctcaataaaatataccaaatttcgattgagcctggtggctgtaatcccagcatgttgggaagccgaggT i rheMac3.chr19 C 0 I 1441 s macFas5.chr19 55752268 228 + 59248254 ATCAGTGGAATAATT---TTCTTTAGGAAGAGCAGCCTTGAgccaggcatggtggcacatgcctggaatcccaggactttgggaagcccaggcaggtggattgcttgagcttccacctgcctgggagttccagaccagcctgaacaacatgacaaaacctcatctcaataaaaTATACCAAATTTCGATTGAGCCTGGTGGctgtaatcccagcatgttgggaagccgagg- i macFas5.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I a score=70725.000000 s hg38.chr19_GL949747v2_alt 600770 211 + 729520 gggtgaatcatttgaggtcagaccagcctgactaacatggcgaaaccccatctctacaaaaaatacaaaagttagccagga--ggtcgtgggcgcctgtggtcccagctactcgggaggctgaggcaggagaatgacgtgaatcccggagtcgtaggttgcagtgagccaagatcgtgccactgcacttcagcctgggcgacacagcaagact s panTro4.chr19 59872746 211 + 63644993 gggtgaataatttgaggtcagaccagcctgactaacatggcgaaaccccatctctacaaaaaatacaaaagttagccagga--ggtcgtgggcgcctgtggtcccagctactcgggaggctgaggcaggagaatgacgtgaaccccggagtcgtaggttgcagtgagccaagatcgtgccactgcacttcagcctgggcgacacggcaagact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56792543 211 + 60714840 gggtgaatcatttgaggtcagaccagtctgactaacatggtgaaaccccatctctactaaaaatacaaaaattagccagga--ggtggtgggcgcccgtggtcccagctactcgggaggctgaggcagaagaatggtgggaacccgggaggcggagcttgcagtgagccgagatcatgccactgcactccagcctgggcgaaagagcaagact i ponAbe2.chr19 C 0 I 1814 s macFas5.chr19 55752496 139 + 59248254 ----------tttgaagtcagaccagc----ctaacatggtgaaaccccatgtctactaaaaatacaaaaattagccaggcatgggggtgaacgtccataatctcagctactcgggaggctgaggcatgacaatcacttgaacccgggaggct------------------------------------------------------------ i macFas5.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=212369.000000 s hg38.chr19_GL949747v2_alt 600981 984 + 729520 gaggttgcagtgagctgtgatcctcaacctcctgggttcaagggattgtcgagcctcagcctcccaagtagctgggattatagacattcgctcccatgcctggctaatttttgtattGCAAAAATGCACTCCagcctagatgacaggactgcactccagcctggatgacagagcaagactgtgtctcaaaaataaataaataaataaataaataGCCAACTgtgatcgtgcatgcctgtagtcccagctactcaggaggccaaggcaggaggatcacttgagactgggaggtcatggctacagtgagccatgatctcgcaactgcactccagcctgggcaacagagggagaGA--------------------------------------------------------------------------------------------------------------------aaggaaggaaggagggaaggagggaaggagggaagggaaggagggaaaggaagtcagtcttgtgggacaaggaaggaaggaagga----agTCAGTcagtcttgtgggactcagccctgaacctttgggatctgatgctgtccccaggtagggagtgtcagaactaaatcaaaggagaggacacccagctggtctctgctggagaactggttgttggtggggagaaacatacatttttggtgaagtattctgtgttgagtgtgaaagtaggaaaaacaGgactgggtatggtggttcatgcctgtcattccaggattttgggaggccaaggcaggcggatcacttgaggtcaggactttgagaccaccctggtgaacatggcaaaaccccatctctactaaaaaaaaatacaaaaattagctgggcgcggtggcaggtgcctgtaataccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcagtgagctgagattgtgcctttgcactccagcctgggagacagagcaagactctccctcaaaa--aaaaaaaaaggccgggcgcagtggctcacgcctataatatcagcactttgggaggccgaggcaggT s panTro4.chr19 59872957 990 + 63644993 GGGGTTGCAGTGAGCTGTGATcctcaacctcctgggttcaagggattgtcgagcctcagcctcccgagtagctgggattatagatgttcgctcccatgcctggctaatttttgtatCGCAAAAATGCACTCCagcctagatgacaggactgcactccagcctggatgacagagcaagactgtgtctcaa----aaataaataaataaataaataGCCAACTgtgatggtgcatgcctgtagtcccagctactcgggaggccaaggcaggaggatcacttgagactgggaggtcacggctacagtgagccgtgatctcgcaactgcactccagcctgggcaacagagggagaGAaag------------------------------------------------------------------------------------------------------------gaaggaaggaaggaaggagggaaggagagaaggagggaagggagggagggaaaggaagTCAGTCTTGTGGGACAAGGAAGGAAGGAAGGAAGTCAGTCAGTcagtcttgtgggactcagccctgaacctttgggatctgatgctgtccccaggtagggagtgtcagaactaaatcaaaggagaggacacccagctggtctctgctggagaactggttgttggtggggagaaacatacatttttggtgaagtattctgtgttgagtgtgaaagtaggaaaaacaGgactgggcatggtggctcatgcctgtcattccaggattttgggaggccaaggcaggcggatcacttgaggtcaggactttgagaccaccctggtgaacatggcaaaatcccatctctact--aaaaaaatacaaaaattagctgggcgcggtggcaggtgcctgtaataccagctactcgggaggctgaggcaggggaatcacttgaacccgggaggcggaggttgcagtgagctgagattgtgcctttgcactccagcctgggagacagagcaagactctccctcaaaa--aaaaaaaaaggccgggcgcagtggctcacgcctataatatcagcactttgggaggccgaggcaggT i panTro4.chr19 C 0 C 0 s macFas5.chr19 55752635 1014 + 59248254 gaggttgcagtgaactgtgatcATCAACAC---------------------------------------------AATTGCAAAAA------------------------TTGCAATACAAAAATGCACTCCAGCCTAGATGACAGGACTGCACTccaggctggatgacagagcaagactgtgtctcaa-------taaataaataaataaatagccaactgtgatggtacatgcctctagtaccagctactcaggaggccaaggcaggaggatcatttgagactgggaggtaaaggctgcagtgagccgtgatctcgtaactgcactccagcctgggcaacagagggagaGgaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagaagagaagagaaggagaaagagagagagagagagagaGAGggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagg--aaggaaggaag------gaaggaaggaaggaaggaagga----ag---ggcagtcttgtgggactcagccctgaacctgtgggatctgatgctgtccccaggtagagagtgtcagaaccgaaccaaaggagaggacacccagctggtctctgctggagaactggttgttggtggggagaaacaaacatttttggtgaagtattctgtgttgagtgtgaaagtaggaaaaacaGggccgggcgccgtggcgcatgcctgtcatcccaggattatgggaagccagggcaggcagatcacttgaggtcaggactttgagactaccctggtgaacatggcgaaatcccatctctaat-taaaaaaatacaaaaattagctgggcgcagtggagcgcacctgtaataccagctactccggaggatgaggcaggagaatcacttgaatctgggaggcggaggttacagtgagccgagattgtgccactgctctccagcctgggagatagagcaagactccatctcaaaaacaaacaaaCAggccaggcgctgtggctcaagcctgtaatcccagcactttgggaggccgagacgggc i macFas5.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56792754 1814 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=3645.000000 s hg38.chr19_GL949747v2_alt 601965 7 + 729520 ggatcac s panTro4.chr19 59873947 7 + 63644993 ggatcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56794568 7 + 60714840 ggattac i ponAbe2.chr19 I 1814 C 0 s macFas5.chr19 55753649 7 + 59248254 ggatcac i macFas5.chr19 C 0 I 584 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=610591.000000 s hg38.chr19_GL949747v2_alt 601972 2366 + 729520 tgacacccaacaccacgccttctaattttttgcatttttagtagaaacggggtttcaccatgttggccaggcttgtctcgaactcctgtcctctggtgatccacctgccttggcctcccaaagtgctggaattacaggcgtgaaccCAGCAACTTTTCCCCCTTTTATCATACCTTAATTTGCCTCCACCACCCCCAGAAGCTCCAAGTCTCTACGCCTTTTCatttatgtatgtatgtatttatttatttatttatttattttattttgagacagggtctccctctatctcccaggctgcagtgcagtggcgtgatcttggcccactgcaacctccacctcccgggttcaagtaatcctcctgtctcagcct----cccaagtagctgggattacagggcacaccaccacacctggctaatttttgtatttttagtggagactgggtttcaccctgttgtccaggctagtctcaaactcccgacgtcaggtgatccacccatttcggttcccaaagtgttgagattacagaccgtgagccactgGGACG---GACACCCCTACTCCTTTCttcttcttc-------ttctttttttttttttttttgagatggagtctccctttgaagcccaggctggagtacaatggtgcgat-----cttagctcactgcagtttcctcctcccgggttcaagtgattctcctgcctcagcctccggagtagctgggattacaggcacacaccaccacaccagctaatttttgtatttttagcagagatggggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccaccttggcctcccaaactgctgggatcacaggcgtgagccactgcacccTACACTCTTAtactcctttctgtagctcaggcagctagatgagcttcaatcatctggcccttcctccagtctcacatttttgtgggactcctgtgcatacataattgaatctggtttttcttctgtcaaactgttttgtgtcaatgtaattcatagcccatccaaagaacctaggagggtggagggaatccattttctctcctccacaCTggagggccatggagcccaagagttcaagactggcccggtgtacaaagtgagacccagtctctatttaaaaaaGATGGGGAGGGggccgggcacggtgtctcacgcctgtaattccagcactttgggaggcccaggtgggtggatcacctgaggtcaggagtccgagactagcctggccaaggtggtgagaccgtgtctttactaaaaatacaaaattagcttggtatggtggcaggagcctgtaatcccagctacttggaaggctagggcaggagaatcgcttgGTTTGGGATTTTCTCCCTGAGGCACTTGCTATCTCCAGGATTATGGGTCTCAGGTGAAagaaagacaaagaaggagagagagac--agagagggacagggaaagagaaTTTCAGACTTATCTAACATTGACACTTAGGAGAAGTAGGGAGAAAGAGGTGGGAAAATAAAGTGGCTAGGTAAAAATGAACATGTCAGTAACAATAATAGCATTAACAATAACTAGTATTgccgggtgcagtggctcacgcctctaatcccagcactttgggacgccgaggtgggcgaatcacaaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaagttagctagctgggcatagtggtgcatgcctgtaatcccagctactctggaggctgaggcaggagaatcgcttgaacccgggaggcaaaggttgcagtgagtcaagatcaggccactgcactccagcccaagggacagagtgagactctgtctca------------------aataataataataataataaCTAGTggccaggcacagtggctcacgcctgtaatcccagtgtagcaggacgagccacagacaaaaacctctcagacaccgagttgtagaaggaagggc-tttattcagctgggagcatcggcaagctactgtcttaaaatccaagctcctcgagtgcacagtttctgtcccttttaagggctcacaacactaaagactgcgcatgaaagggtca----tgattgagcaatctaggggatacataacaggggtttcgtgcactgctggtcagagagaa--agaatagggcagggagtttcacagtgttcttctatacaatgcctggaatctatggataacatcgggttctaagtcatgagttgatttttatctactaggtttacgccaggcaggcccaggcctggtttcgggtctggttttgggtctggtgcctggcgccgggctacctgcctttggtttcacttccttgtttttttct s panTro4.chr19 59873954 2364 + 63644993 tgacacccaacaccacgccttctaattttttgcatttttagtagaaacggggtttcaccatgttggccaggcttgtctccaactcctgtcctctggtgatccacctgccttggcctcccaaagtgctggaattacaggcgtgaaccCAGCAACTTTTCCCCCTTTTATCATACCTTAATTTGCCTCCACCACCCCCAGAAGCTCCAAGTCTCTACGCCTTTTCATTTATGTATGTATG----------------TATGTAttttattttgagacagggtctccctctatctcccaggctgcagtgcagtggcgtgatcttggcccactgcaacctccgcctcccgggttcaagtaatcctcttgtctcagcct----cccaagtagctgggattacagggcacaccaccacacccggctaatttttgtatttttagtggagactgggtttcaccctgttgtccaggctagtctcaaactcctgacgtcaggtgatccacccatttcggttcccaaagtgttgagattacaga-cgtgagccaccgGGACG---GACATCCCTACTCCtttcttcttcttc-------------ttttttttttttttgagatggagtctccctttgtagcccaggctggagtacaatggtgcgat-----ctcagctgactgcaacctccgcctcctgggttccagtgatcctcctgcctcagcctccagagtagctgggattacaggaacacaccaccacaccggctaatttttgtatttttagcagagatggggtttcatcatgttggccaggctggtctcaaactcctgacctcaggtgatccacccacgttggcctcccaaagtgctgggatcacaggcgtgagccacctcacccTACACTCTTAtactcctttctgtagctcaggcagctagatgagcttcaatcatctggcccttcctccagtctcacatttttgtgggactgctgtgcatacataattgaatctggtttttcttctgtcaaactgttttgtgtcaatgtaattcatagcccatccaaagaacctaggagggtggagggaatccattttctctcctccacaCTggagggccatggagcccaagagttcaagactggcccggtgtacaaagtgagacccagtctctatttaaaaaaGATGGGGAGGGggccgggcacggtgtctcacacctgtaattccagcactttgggaggcccaggtgggtggatcacctgaggtcaggagtccaagactagcctggccaaggtggtgagaccgtgtctttactaaaaatacaaaattagcttggtatggtggcaggagcctgtaatcccagctacttggaaggctagggcaggagaatcgcttgGTTTGGGATTTTCTCCCTGAGACACTTGCTATCTCCAGGATTATGGGTCTCAGGTgaaagaaagacaaagaaggagagagagacagagagagggacagggaaagagaATTTCAGACTTATCTAACATTGACACTTAGGAGAAGTAGGGAGAAAGAGGTGGGAAAATAAAGTGGCTAGGTAAAAATGAACATGTCAGTAACAATAATAGCATTAACAATAACTAGTATTgccgggtgcggtggctcacgcctctaatcccagcactttgggatgccgaggtgggcgaatcacaaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaagttagctagctgggcatagtggtgcatacctgtaatcccagctactctggaggctgaggcaggagaatcgcttgaacccgagaggcaaaggttgcagtgagtcaagatcaggccactgcactccagcccaagggacagagtgagactctgtctcaaataataataataataataataataataataataataaCTAGTggccaggcacagtggctcacgcctgtaatcccagtgtagcaggacaagccacagac-aaaacctctcagacaccgagttgtagaaggaagggc-tttattcagctgggagcatcggcaagctactgtcttaaaatccaagctcctcgagtgcacagtttctgtcccttttaagggctcacaacactaaagactgcgcatgaaagggtcg----tgattgaacaatctaggggatacgtaacaggggtttcgtgcactgctggtcagagagaaacagaacagggcagggagtttcacaatgttcttctatacaatgcctggaatctatggataacatcgggttctaagtcatgagttgatttttatctactaggtttacgccaggcaggcccaggcctggtttcgggtctggttttgggtctggtgcctggtgcccggctacctgcctttggtttcacttccttgtttttttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56794575 2374 + 60714840 tgacacctaccaccacgcctgctaattttttgtatttttagtataaagggggtttcaccatgttggccaggcttgtctcgaactcctgtcctctggtgatccacctgcctcggcctcccaaagtgctggaattacaggcatgaaccCAGCAACTTttcccccttttatcataccttaatttgcctccaccacccccagaagctccaagtctctactccttttcatgtatgtatgtatg----tatgtatgtatgtatttattttattttgagacagggtctccctctatcttccaggctggagtgcagtggcgtgatcttggcccactgcaacctccacctcccaggttcaagtaatcctcctgtctcagcctcccgcccgagtagctgggattacagggcacaccaccacgcctggctaatttttgtatttttagtggagaccgggtttcaccctattgtccaggctagtctcaaactcctgatgtcaggtgatccacccatttcggttcccaaagtgttgagattacaga-cgtgagccatcgggacggacgacacccctacttctttcttcttcttctttttttttttttttttttttttttttgagatggagtctccctttgtagcccaggctggagtacaatggtgcgatctcagctcagctcactgcagtttcctcctcccgggttcaagtgattttcctgcctcagcctccagagtagctgggattacaggcacgtaccaccacactggctaatttttgtatttttagcagagatggggtttcaccatgttggccaggctggtctcaaactcctgacctcagaagatccacccaccttggcctcccaaagtgctgggattacaggcgtgagccaccgcaccctacacttt--tactgctttctgtagctcaggcagctaaacgagcttcaatcatctggcccttcctccagtcccacatttttgtgggattcctgtgcatacacaattgaatctggtttttcttctgtcagactgttttgtgtcaatgtaattcacaacccatccaaagaacctaagagggtggagggaatccattttctctcctccacaCTggagggccatggagcccaggagttcaagaccggcccagtgtacaaagtgagacccagtctctagttaaaaaagaGGGGGAGGGagccgggcacagtgtctcacgcctgtaattccagcactttgggaggcccaggtgggtggctcacctgaggtcaggagtccaagaacagcctggccaaggtggtgaaaccccatctttactaaaaatacaaaattagcttggtatggtggcaggagcctgtaatcccagctacttggaaggctagggcagcagaatcacttgGTTTGGGATTTTCTCTCTGAGACACTTGCTATCTCCAGGATTATGGGTCTCAGGTgaaagaaagacacagaaggagagagagacagagagagggacaggaaaagagaATTTTAGACTTATCTAACATTGACACTTAGGAGAAGTAGGGAGAAAGAGGTGGGAAAATAAAGTGCCAAGGTAAAAATGAACACGTCAGTAACAATAATAGCATTAACAATAACTAGTATTgccgggtgtggtggctcacgcctctaatcccagcactttgggatgccaaggcgggcgaatcatgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaagttagctagctgggcacagtggtgcacgcctgtaatcccagctactagggaggctgaggcaggaggatcgcttgaacccgggaggcaaaggttgcagtgagtcaagatcaggccactgcactccagcccaagggacagagtgagactctgtctca------------------aataataataataataataaCCAGTggccaggtgcagtggctcacacctgtaaccccagtgtagcaggacgagccacagac-aaaacctctcagacacagagttgtagaagaaagggcttttattcagctgggagcatcggcaagctactgtcttaaaatccaagttcctcgagtgcacaatttctgtcccttttaagggctcacaacactaaagattgtgcacgaaagggtcgtgattgattgagccatctaggggatacgtaacaggggtttcatgcactggtggtcagagtgaaacagaacagggcagggagtttcacaatgttcttctatacaatgcctggaatctgtggataacatcgggttctaagtcatgagttgatttttatctactaggttgacgccaggcaggcccaggc------------ctggttttgggtctggtgcctggcgccgggctgcctgcctttggtttcacttgcttgcttttttct i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e macFas5.chr19 55753656 584 + 59248254 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=26207.000000 s hg38.chr19_GL949747v2_alt 604338 298 + 729520 ttttc--------------------------------tttttttttttttttgagacagagtcttgctctgtcgctaaggctggagtgcagtggcacaatctcggctcactgcaagctccgcctcctggattcaagcaattctgctgcctcatccttccgagtagctgggattacaggcgcacgccaccatgcccggctaatttttgtatttttaatagagacggggtttcaccatgttggccaggctggtctcaaactcctgaccttgtgatccacccgccttggcctcccaaagtgctgggattacaggcgtgagccaccgtgcccgg s panTro4.chr19 59876318 330 + 63644993 ttttctttttctttttttttttctttttctttttctttttttttttctttttgagacagagtcttgctctgtcgcttaggctggagtacagtggcgcaatctcggctcactgcaagctccgcctcctggattcaagcaattctgctgcctcatcctcccgagtagctgggattacaggcgcacgccactatgcccggctaatttttgtatttttaatagagacggggtttcaccatgttggccaggctggtctcaaactcctgaccttgtgatccacccgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccgg i panTro4.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56796949 0 + 60714840 C e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e macFas5.chr19 55753656 584 + 59248254 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=3791.000000 s hg38.chr19_GL949747v2_alt 604636 17 + 729520 cctccttgttttttttc s panTro4.chr19 59876648 17 + 63644993 cctccttgtttttttct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103312972 17 - 106955855 cttccttgcttttttct i nomLeu3.chr10 I 246 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56796949 0 + 60714840 C e calJac3.chr22 45914405 7610 + 49145316 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e macFas5.chr19 55753656 584 + 59248254 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=32374.000000 s hg38.chr19_GL949747v2_alt 604653 62 + 729520 taaaacaagtactgagtataaaacaatataaaacaatatgagacggtttctctcttccctca s panTro4.chr19 59876665 62 + 63644993 taaaacaagtactgagtataaaacaatataaaacaatatgagacggtttctctcttccctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56796949 62 + 60714840 taaaacaggtactgagtataaaacaatatagaacaatatgagagggtttctctcttccctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103312989 62 - 106955855 taaaacaggtactgagtataaaacagtataaaacaatatgagagggtttctctctttcctca i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e macFas5.chr19 55753656 584 + 59248254 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=72867.000000 s hg38.chr19_GL949747v2_alt 604715 58 + 729520 ccagcactttgggaggctgaggcaggtggatcacaaggtcagAGTGGAT--------------agcacttta s panTro4.chr19 59876727 58 + 63644993 ccagcactttgggaggctgaggcaggtggatcacgaggtcagAGTGGAT--------------agcactttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56797011 72 + 60714840 ccagcacttcgagaggctgaggcgggtggatcacgaggtcagAGTGGATCATGAGGTCAGATcagcactttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103313051 55 - 106955855 ccagcacttcaggaggctgaggagggtggatcacaaggtca---tgaTc--------------agcactttg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60613695 54 + 64156825 ccagcactttgggaggctgaggcaggcagattatgaggtca----gATc--------------agcacttcc i rheMac3.chr19 I 1441 C 0 s macFas5.chr19 55754240 53 + 59248254 ccagcactttgggaggctgaggcaggcagattacg-ggtca----gATc--------------agcacttcc i macFas5.chr19 I 584 C 0 s papAnu2.chr19 47859126 54 + 51301725 ccagcactttgggaggctgaggcaggcagattacgaggtca----gatC--------------AGCACTTcc i papAnu2.chr19 I 5245 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e chlSab2.chr6 47566336 1756 + 50890351 I a score=327855.000000 s hg38.chr19_GL949747v2_alt 604773 134 + 729520 ggaggttgaggtgggaggatcccttgagcccaggagctcaagtccagcctgggcaacatagcaagacccccatttccaattttagtgtatgtgctgccaaagcaaatacTCTGAGACCCTGTTTCTACAAAAAA s panTro4.chr19 59876785 134 + 63644993 ggaggttgaggtgggaggatcccttgagcccaggagctcaagtccagcctgggcaacatagcaagacccccatttccaaTTTTAGTGTATGTGCTGCCAAAGCAAGTACTCTGAGACCCTGTTTCTACaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56797083 128 + 60714840 ggaggttgaggtgggaggaccccttgagcccaggaactcaagtccagcctgggcaacatagcaagaccccCATTTCCAATTTTA------GTGCTGCCAAAGCAAGTACTGTGAGACCCTGTTTCTACAAAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103313106 134 - 106955855 ggaggttgaggtaggaggatcccttgagcccaggagctcaagtccagcctgggcaacatagcaagaccccCATttccgattttagtgtacgtgctgccaaagcaagtacTGTGAGACCCTGTTTCTACAAAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60613749 134 + 64156825 ggaggttgaagtgggaggatccagtcagcccaggagctcgagtacaacctgggcaacatagcaagaccccCATttccgattttagtatatgtgctgccaaagcaagtacTGTGAGACCCTGTTTCTACAAAAAA i rheMac3.chr19 C 0 I 10 s macFas5.chr19 55754293 134 + 59248254 ggaggttgaagtgggaggatcccttgagcccaggagctcaagtccaacctgggcaacatagcaagacccccatttccgattttagtatatgtgctgccaaagcaagtactgtgagaccctgtttctacaaaaaa i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47859180 134 + 51301725 ggaggttgaagtgggaggatcccttgagcccaggagctcaagtccaacctgggcaacatagcaagacccccatttccgattttagtatatgtgctgccaaagcaagtactgtgagaccctgtttctacaaaaaa i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47568092 134 + 50890351 ggaggttgaagtgggaggatcccttgagcctaggagctcaagtccaacctgggcaacatagcaagaccccCATttccgattttagtgtatgtgctgccaaagcaagtacTGTGAGACCCTGTTTCTACAAAAAA i chlSab2.chr6 I 1756 I 1 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I a score=21675.000000 s hg38.chr19_GL949747v2_alt 604907 82 + 729520 TAAAAAAATTAAAATTAGT-GCTTGG----AAAAAAAAATTAGTGCTTGACCAGGAGGCAAGCACACCTCCTCATCCTCTCATGGAT s panTro4.chr19 59876919 82 + 63644993 taaaaaaattaaaa-taGT-GCTTGG---AAAAAAAAAATTAGTGCTTGACCAGGAGGCAAGCACACCTCCTCATCCTCTCATGGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56797211 86 + 60714840 TGAAAAAATAAAAATGAGT-GCTTGGAAAAAAAAAAAAAAAAGTGCTTGGCCAGGAGGCAAGCACACCTCCTCATCCTCTCACGGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103313240 84 - 106955855 TAAAAAAATAAAAATTAGT-GCCTGG--AAAAAAAAAAATTAGTGCTTGACCAGGAGGCAGGCACACCTCCTCATCCTCTCATGGAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55754428 19 + 59248254 aaaaaaaaTAAAAATTAGT-------------------------------------------------------------------- i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47859315 19 + 51301725 ttaaaaaataaaaattagt-------------------------------------------------------------------- i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47568227 20 + 50890351 GTAAAAAATAAAAATTAGTG------------------------------------------------------------------- i chlSab2.chr6 I 1 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e rheMac3.chr19 60613883 10 + 64156825 I a score=118359.000000 s hg38.chr19_GL949747v2_alt 604989 49 + 729520 GTCTGTCTGTAGAAAGTAAATGGAGACAGCTTCATTTTACCCAACTGCT s panTro4.chr19 59877001 49 + 63644993 GTCTGTCTGTAGAAAGTAAATGGAGACAGCTTCATTTTACCCAACTGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56797297 49 + 60714840 GTCTGTCTGTAGAAACTAAACGGAGACAACTTCATTTTACCCAACTGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103313324 49 - 106955855 GTCTGTCTGTAGAAACTAAATGGAGACAGCTTCATTTTACCCAACTGCT i nomLeu3.chr10 C 0 I 321 s rheMac3.chr19 60613893 49 + 64156825 GTCTGTCTGTAGAAAATAAATGGAGACAGCTTCATTTTACCCAACTGCT i rheMac3.chr19 I 10 C 0 s macFas5.chr19 55754447 47 + 59248254 --CTGTCTGTAGAAAATAAATGGAGACAGCTTCATTTTACCCAACTGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47859334 47 + 51301725 --ctgtCTGTAGAAAATAAATGGAGACAGCTTCATTTTACCCAACTGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47568247 46 + 50890351 ---TGTCTGTAGAAAATAAATGGAGACAGCTTCATTTTACCCAACTGCT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I a score=1641847.000000 s hg38.chr19_GL949747v2_alt 605038 727 + 729520 CCGTTTTAGGTCCGCTCCTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGGGAGCCGACTCCCGGCTGCAGAG-----------------------CCTTGTCAGAAGCAGGCAATGTACACAGAGACCCAAGGCCTGGTGTAGACAGGCTTTCACAGACCTGGGCATTTTGTTGAATTGTTTTTGAATTGTGGTTTCTTATCAGTTCATCCGATACTCTGTTCTAACCACGTAGTTCCTCTTTTGGATCTCCAAACCCCTTTGCAGGTTCCATCTACCCGAACCAAACTCACTTATTCCAACAGAAGTCTGGTGTTTCTTGTTTTTTTTGtttgtttgtttctttcgttttgttttttgagatgttgtctccctctatcacccaggctggagtgcagtggcgagatctcagctcactgcaacctctgcttcccgggttcaagcaattctcctccctcagcctcctgggtagctgggattacaggtgcctgccgccacacccagctaacttttgtatttttagtagagacgggatttcaccatgttggccaggctagtctcgagctcctgacctcaagtgatccacccatctcagcctcccaaagtgctgggattacagccttaagccaccgcgctcaaccAGAAGTCTGTTTAAATCCATCCTTCTCCCCAgccacccatgagttatgtgaccttggggttgctacttaacatttcagtctcaatttcctcaatagaacaaaagttag s panTro4.chr19 59877050 742 + 63644993 CCGTTTTAGGTCCGCTCCTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGGGAGCCAACTCCCGGCTGCAGACTGACAAGGCTGACAAGGCTGACTCCTTGTCAGAAGCAGGCAGTGTACACAGAGACCCAAGGCCTGGTTTAGACAGGCTTTCACAGACCTGGGCATTTTGTTGAATTGTTTTTGAATTGTGGTTTCTTATCAGTTCATCCGATACTCTGTTCTGACCACGTAGTTCCTCTTTTGGATCTCCAAACCCCTTTGCAGGTTCCATCTACCCGAACCAAACTCACTTATTCCAACAGAAGTCTGGTGTTTCTTGttttt--------tttgtttcttttgttttgttttttgagatgttgtctccctctatcgcccaggctgcagtgcagtggcaagatctcggctcactgcaacctctgcttcccgggttcaagcaattctcctccctcagcctcctgagtagctgggattacaggcgcctgccgccacacccagctaacttttgtatttttagtagagaccggatttcaccatgttggccaggctggtctcgagctcctgacctcaagtgatccacccatctcagcctcccaaagtgctgggattacagccttaaaccactgcgctcaaccAGAAGTCTGTTTAAATCCATTCTTCTCCCCAgccacccaagatttatgtgaccttggggttgctacttaacattacagtctcaatttcctcaATAGAACAAaagttag i panTro4.chr19 C 0 I 1 s ponAbe2.chr19 56797346 723 + 60714840 GTGTTTTAGGTCCGCTCTTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGGGAGCCAACTCCCGGCTGCAGAA-----------------------CCTTGTTAGAAGCAGGCAATGTACACAGAGACCCAAGGCCTGGTTTAGACAGGCTTTCACAGACCTGGGCATTTTGTTGAATTGTTTTTGAATTGTGGTTTCTTATCAGTTCATCCAATACTCTTTTCTGGCCATGTAGTTCCTCTTTTAGATCTCCAAACGCCTTTGCAGGCTCCATCTACCCGAACCAAACTCACTTATTCCAACAGAAGTCTGGTTTTTCTTGGGTTT-TTGtttgtttgtttcttttgttttgttttttgagatgttgtctccctctatcgcccaggctggagtgcagtggcgagatctcggctcactgcaacct---cttcctgggttcaagcaattctcctccctcagcctcctgagtagctgggattacaggcgcccaccgccacacccagctaacttttgtatttttagtagagacgggatttcaccgtgttggccaggctggtctccagctcctgaactcaagtgatccacccatcttggcctcccaaagtgctgagattacaggcttaagccactgcgctcagccAGAAGTCTGTTTAAATCCATCCTTCTCCCCAgccacccatgagttatgtgaccttggggttgctacttaacatttcagtctcaatttcctcaATACAACAAAAGTTAG i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 103313694 721 - 106955855 cggccCTAGGTCCACTCTTGAGCTTCTGTTGTTCCCAGTCATGCAACCCTGGGAACCGACTCCTGGCTGCAGAG-----------------------CCTTGTCAGAAGCAGGCAATGTACACAGAGACCCAAGGCCTGGTTTAGACAGGCCTTCACAGACCTGGGCATTTTGTTGAATTGTTTTTGAATTGTGGTTTCTTATCAGTTCATCCAATACTCTGTTCTGGCCACGTAGTTCCTCTTTTGGATCTCCAAACGCCTTTGCAGGCTCCATGTACCCGAACCAAACTCACTAATTCCAACAGAAGTCTGGTTTTTCTTGTTTTT---GtttgtttgtttgttttgttttgttttttgagatgttgtctccctctatcgcccaggctggagtgcagtggcaagatctcgactcactgcaacctctgcttcccaggtgcaagtaattctcctccctcagcctcctgagtaggtgggattacaggcgcccactgccatgcccagctaacttttgtatttttagtagagatgggatttcaccatgtgggccaggctggtctcgagctcctgacctcaagtgatccacccacttcggcctcccaaagtgctgggattacagctgtaagccaccatgctcagccAGAAGTCTGTTTAAATCCGTCCTTCTCCCTAgccacccatgagttatgtgaccttgtggttgctacttaacatttcagtctcaatttcctcaatagaacaaaagc--- i nomLeu3.chr10 I 321 C 0 s rheMac3.chr19 60613942 701 + 64156825 GTGTTTTAGGTCTGCCCTTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGAGAGCCGACTCCTGGCTGCAAAG-----------------------CCTTGTTAGAAGCAGGCAATGTACACAGAGACCCAAGGCCTGATTTAGACAGGCTTTCACAGACCTGGGCATTTTGTTGAGTTGTTTTTGAATTGTGGTTTCTTATCAGTTCATCCAATACTCTGTTCTGACCACGTAGTTCCGCTTTTGGATCTCCAAACGCCTTTGCAGGCTCCATCTACCCGAACCAAACTCATTTATTCCAACAGAATTCTGG------------------------GGtttgttttgttttg--tgttgagaccttgtctccctctattgcccgggctggagtgcagtggcgagatctcggcttattgtggcctccccttcctgggttcaagcaattctcctccctcagcctcctgaatagctgggattacaggcacctgctgccacacccagctaacttttgtatttttagtacagacgggatttcaccatgttgaccaggctggtctcgagctcctgacctcaagtgatccacccacctcggcctcccaaagtgctgggattacagccatgagccaccacgctcagccAGAAGCCTGTTTAAATCCATCCTTCTCCCTAgccacccatgagttatgtgatcttggggttgctacttaccatttcagtctcaatttcctcaAtagaacataagttag i rheMac3.chr19 C 0 I 1276 s macFas5.chr19 55754494 701 + 59248254 GTGTTTTAGGTCTGCCCTTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGAGAGCCGACTCCTGGCTTCAGAG-----------------------CCTTGTTAGAAGCAGGCAATGCACACAGAGACCCAAGGCCTGATTTAGACAGGCTTTCACAGACCTGGGCATTTTGTTGAATTGTTTTTAAATTGTGGTTTCTTATCAGTTCATCCAATACTCTGTTCTGACCACGTAGTTCCGCTTTTGGATCTCCAAAAGCCTTTGCAGGCTCCATCTACCCGAACCAAACTCATTTATTCCAACAGAAGTCTGG------------------------GGtttgttttgttttg--ttttgagaccttgtctccctctattgcccaggctggagtgcagtggcgagatctcggcttattgtgacctccccttcctgggttcaagcaattctcctccctcagcctcctgaatagctgggattacaggcacctgctgccacacccagctaacttttgtatttttagtacagacgggatttcaccatgttgaccaggctggtctcgagctcctgacctcaagtgatccacccacctcggcctcccaaagtgctgggattacagccatgagccaccacgctcagccAGAAGCCTGTTTAAATCCATCCTTCTCCCTAgccacccatgagttatgtgatcttggggttgctacttaccatttcagtctcaatttcctcaAtagaacataagttag i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47859381 701 + 51301725 GTGTTTTAGGTCTGCCCTTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGAGAGCCGACTCCTGGCTGCAGAG-----------------------CCTTGTTAGAAGCAGGCAATGTACACAGAGACCCAAGGCCTGATTTAGACAGGCTTTCACAGACCTGGGcattttgttgaattgtttttGAATTGTGGTTTCTTATCATTTCATCCAATACTCTGTTCTGGCCACGTAGTTCCTCTTTTGGATCTCCAAACGCCTTTGCAGGCTCCATCTACCCGAACCAAACTCATTTATTCCAACAGAAGtctgg------------------------ggtttgttttgttttg--ttttgagaccttgtctccctctatcgcccaggctggagtgcagtggcaagatctcggcttaTTGtgacctccccttcctgggttcaagcaattctcctccctcagcctcctgaatagctgggattacaggcacctgccgccacacccagctaacttttgtatttttactacagacgggatttcaccatgttgaccaggctggtctcgagctcctgacctcaagtgatccacccacctcggcctcccaaagtgctgggattacagccgtgagccactatgctcagccagAAGTCTGTTTAAATCCATCCTTCTCCCTAGCCACCCATGAGTTATGTGATCTTGGGGTTGCTACTTACCATTTCAGTCTCAATTTCCTCAATAGAACATAAGCTAG i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47568293 701 + 50890351 GCGTTTTAGGTCTTCCCTTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGAGAGCCGACTCCTGGCTGCAGAG-----------------------CCTTGTAAGAAGCGGGCAATGTACACAGAGACCCAAGGCCTGGTTTAGACAGGCTTTCACAGACCGGGGCATTTTGTTGAATTGTTTTTGAATTGTGGTTTCTTATCAGTTCATCCAATACTCTGTTCTGGCCACGTAGTTCCTCTTTTGGATCTCCAAACCCCTTTGCAGGCTCCATCTACCCGAACCAAACTCACTTATTCCAACAGAAGTCTGG------------------------Gttttgttttgttttg--ttttgagaccttgtctccctctgttgcccaggctggagtgcagtggcgagatctcggtttattgtgacctccccttcctgggttcaagcaattctcctccctcagcctcctgaatagctgggattacaggcacctgccgccacacccagctaacttttgtatttttagtacagacgggatttcaccatgttgaccaggctgatcttgagctcctgacctcaagtgatccacccacctcggccccccaaagtgctgggattatagccgtgagccaccacgctcagccAGAAGTCTGTTTAAATCCATCCTTCTCCCTAGCCACCCATGAGTTATGTGATCTTGGGGTTGCTACTTACCATTTCAGTCTCAATTTcctcaatagaacataagttag i chlSab2.chr6 C 0 I 8 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I a score=2360.000000 s hg38.chr19_GL949747v2_alt 605765 7 + 729520 aagaatt-- s panTro4.chr19 59877793 5 + 63644993 aagaa---- i panTro4.chr19 I 1 C 0 s ponAbe2.chr19 56798070 5 + 60714840 AAGAA---- i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 103314415 5 - 106955855 aagaa---- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55755196 7 + 59248254 aagaa--tt i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47860083 5 + 51301725 AAGAA---- i papAnu2.chr19 I 1 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e chlSab2.chr6 47568994 8 + 50890351 I e rheMac3.chr19 60614643 1276 + 64156825 I a score=11813.000000 s hg38.chr19_GL949747v2_alt 605772 17 + 729520 gtaACAAAAGATAGttt s panTro4.chr19 59877798 15 + 63644993 -taacaaaagatag-tt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56798075 16 + 60714840 -TAACAAAAGATAATTT i ponAbe2.chr19 C 0 I 36 s nomLeu3.chr10 103314420 16 - 106955855 -taACAAAAGATAATTT i nomLeu3.chr10 C 0 M 2680 s papAnu2.chr19 47860088 16 + 51301725 -taacaaaagataattt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e chlSab2.chr6 47568994 8 + 50890351 I e macFas5.chr19 55755203 0 + 59248254 C e rheMac3.chr19 60614643 1276 + 64156825 I a score=273.000000 s hg38.chr19_GL949747v2_alt 605789 1 + 729520 t s panTro4.chr19 59877813 1 + 63644993 t i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47860104 1 + 51301725 t i papAnu2.chr19 C 0 I 295 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56798091 36 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e chlSab2.chr6 47568994 8 + 50890351 I e macFas5.chr19 55755203 0 + 59248254 C e rheMac3.chr19 60614643 1276 + 64156825 I a score=-247.000000 s hg38.chr19_GL949747v2_alt 605790 7 + 729520 attttta s panTro4.chr19 59877814 3 + 63644993 att---- i panTro4.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56798091 36 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e chlSab2.chr6 47568994 8 + 50890351 I e papAnu2.chr19 47860105 295 + 51301725 I e macFas5.chr19 55755203 0 + 59248254 C e rheMac3.chr19 60614643 1276 + 64156825 I a score=66820.000000 s hg38.chr19_GL949747v2_alt 605797 297 + 729520 tttttatttttattttttgagatggagtcttgctctgtcacctaggctggagtgcagtggtgtgatggtggctcactgcaagctccgcctcccggattcacgccattctcctgcctcagcctcccaagtagctgggactacaggcacccgccaccgtgcccagctaatttttttaatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctc--gtgatccgcttgcctcggcctcccaaagtgctgggattacaggcgtgagccaccatgcccag s panTro4.chr19 59877817 297 + 63644993 tttttatttttattttttgagatggagtcttgctctgtcacccagactggagtgcagtggtgtgatcttggctcactgcaagctccgcctcccggattcacgccattctcctgcctcagcctcccaagtagctgggactacaggcacccgccaccgtgcccagctaatttttttaatttttagtagagacggggtttcactgtgttagccaggatggtctcgatctcctgacctc--gtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccatgcccag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56798127 298 + 60714840 tttttttcttttttttttaagacagagtctggctctgttgcccaggctggagtgcaatggcgcaatcttggctcaccacaacctccgcctcctgggttggagcaatcctcctgtctcagccttccgagtagctgggattacaggtgtgcaacaccacacccggctaatttttgt-atttttagtagagatggggtttcaccattttggccaggctggtcttgaactcctgacctcaggtgacccacctacctcggcctcccaaagtgctgggattacaggcatgagccaccatgcccag i ponAbe2.chr19 I 36 I 902 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e chlSab2.chr6 47568994 8 + 50890351 I e papAnu2.chr19 47860105 295 + 51301725 I e macFas5.chr19 55755203 0 + 59248254 C e rheMac3.chr19 60614643 1276 + 64156825 I a score=100.000000 s hg38.chr19_GL949747v2_alt 606094 1 + 729520 c s panTro4.chr19 59878114 1 + 63644993 c i panTro4.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56798425 902 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e chlSab2.chr6 47568994 8 + 50890351 I e papAnu2.chr19 47860105 295 + 51301725 I e macFas5.chr19 55755203 0 + 59248254 C e rheMac3.chr19 60614643 1276 + 64156825 I a score=87397.000000 s hg38.chr19_GL949747v2_alt 606095 174 + 729520 ACaaaagataatttcttaatcccatgcatttgagtcttaaaaaaatattctatataattccaaggtcaaagaagaaataacaaagggcatttttaaaaatgctagaactgagtggtggtgaaattgctgttgaaatgtgtttgttgcactgatggaaatttataaatgtaaata s panTro4.chr19 59878115 174 + 63644993 acaaaagataatttcttaatcccatgcatttgagtcttaaaaaaatattctatataattctaaggtcaaagaagaaataacaaagggcattttttaaaatgctagaactgagtggtggtgaaattgctgttgaaatgtgtttgttgcactgatggaaatttataaatgtaaata i panTro4.chr19 C 0 C 0 s macFas5.chr19 55755203 173 + 59248254 acaaaagataatttcttagtcccatgtgtttgagtcttaaaaaaa-attctatataattcataggtcaaagaagaaataacaaagggtattttttaaaatgttagaactgagtggtggtgaaatagctgttgaaatgtgtgtgttgcactgatagaaacttataaatgtaaata i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47569002 173 + 50890351 acaaaagataatttcttagtcccatgtgtttgagtcttaaaaaga-attctatataattcataggtcaaagaagaaataacaaagggtattttttaaaatgttagaactgagtggtggtgaaatggctgttgaaatgtgtgtgttgcactgatggaaacttataaatgtaaata i chlSab2.chr6 I 8 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56798425 902 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47860105 295 + 51301725 I e rheMac3.chr19 60614643 1276 + 64156825 I a score=51963.000000 s hg38.chr19_GL949747v2_alt 606269 78 + 729520 tttatatt-aaaatataaaaTAATGggccaggcatagtggctcacacctgtaatctcagtactttgggaggccaaggcg s panTro4.chr19 59878289 78 + 63644993 tttatatt-aaaatataaaaTAATGggccaggcatagtggctcacacctgtaatctcagtactctgggaggccaaggcg i panTro4.chr19 C 0 C 0 s macFas5.chr19 55755376 77 + 59248254 tttatatt-aaaatataaaa-aaTGggccaggcatagtggttcacacctgtaatctcagtactttgggaggtcaaggcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47860400 78 + 51301725 tctattttaaaaagaggggg-agggggccgggcacggtgtctcacgcctataattccatcactttgggacgcccaggtg i papAnu2.chr19 I 295 C 0 s chlSab2.chr6 47569175 77 + 50890351 tttatatt-aaaatataaaa-aaTGggccaggcatagtggttcacacctgtaatctcagtactttgggaggtcaaggca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56798425 902 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e rheMac3.chr19 60614643 1276 + 64156825 I a score=757385.000000 s hg38.chr19_GL949747v2_alt 606347 717 + 729520 ggagggccat-ggagcccaggagttcaagaccggcccggtgtacaaagtgagacccagtctctagttaaaaaaGAGGGGGAGTGggccaggcacagtgtctcacgcctgtaattccagcactttgggaggccaaagcaggtggatcacccgaggtcaggagtccaaga-------------------------------ccagcccg-gccaaggtggtgaaaccccgtgtc---------tactaaaaa----tacaaaattagctt-----ggtatggtggcgggagcctataatccca------------gctagggcaggagaatcacttgaacccgggaggcagaggttgcagtgagccaagatcatgccactgcactccagcctgggcaacaacagagagacttcatctctaaataaataaataaataaataaaagaaaaTACAAATTTTTT-AAAAAAGGTACTGTggctgggcgtggtggttcacacctgtaatcccagcactttgggaagccgaggcaggtggatctcagatcaggagttcaagaagagcctggccagcatggtgaaaacctatctgtactaaaaattagcctggcatggtggcaggtgcctgt--------------aggaggctgaggcaagagaattgcttgagccccggaggcagaggttgcagtgagccgagaccacaccactgcactccagcctgggcaacagagcgagagtctgtctcaaaaaggaaaca-aaaaaaaaaGTACCTCCAAATTATGGTAGGGTGTCCATA s panTro4.chr19 59878367 709 + 63644993 ggagggccat-ggagcccaggagttcaagaccggcccggtgtacaaagtgagacccagtctctagttaaaaaagaGGGGGAGAGggccggacacagtgtctcacgcctgtaattccagcactttgggaggccaaagcaggtggatcacccgaggtcaggagtccaaga-------------------------------ccagcccg-gccaaggtggtgaaaccccgtgtg---------cactaaaaa----tacaaaattagctt-----ggtatggtggcgggagcctgtaatccca------------gctagggcaggagaatcacttgaacccgggaggcagaggttgcagtgagccaagatcgtgccactgcactccagcctgggcaacaacagagagacttcatctc--------taaataaataaataaaggaaaatacaaaTTTTTT-TAAAAAGGTACTGTggctgggcgtggtggttcacacctgtaatcccagcactttgggaagccgaggcaggtggatctcagatcaggagttcaagaagagcctggccaacatggtgaaaacctatctgtactaaaaattagcctggcatggtggcaggtgcctgt--------------aggaggctgaggcaagagaattgcttgagccccggaggcagaggttgcagtgagccgagaccacaccactgcactccagcctgggcaacagagcgagagtctgtctcaaaaaggaaaga-aaaaaaaaaGTACCTCCAAATTATGGTAGGGTGTCCATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56799327 719 + 60714840 ggagggccat-gaagcccaggagttcaagacccgcccagtgtacaaagtgagacccagtctctaGTTAACAAAGAGGGGGAGGGggccgggcacggtgtctcacacctgtaattccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagtccaaga-------------------------------ccagcccg-gccaaggtggtgaaaccccgtctc---------tactaaaaa----tacaaaattagctt-----ggtatggtggcgggagcctgtaatcccagctacttggaaggctagggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccaagatcatgccactgcactccagcctgggcaacaacagagagatttcatctc--------aaaataaataaataaaagaaaatacaaaTTTTTT-TAAAAAGGTACTGTggctgggcgtggtggttcacacctgtaatcccagcacttcgggaagccgaggcaggtggatctcagatcaggagttcaggaagagcctggccaacatggtgaaaacctatctgtactaaaaattagcctggcatggtggcaggtgcctgt--------------aggaggctga-gcaagagacttgcttgagacctggaagcggaggttgcagtgagccgagaccacaccactgcactccagcctgggcaacagagcgagagtctgtctcaaaaaggaaac--aaaaaaaaaGTACCTCCAAATTATGGTAGGGTGCCCATA i ponAbe2.chr19 I 902 C 0 s macFas5.chr19 55755453 737 + 59248254 ggagggccat-ggagcccaggagttcaagaccagcccggtgtacaaagggagacccagtctctatttaaaaaaGAGGGGGAGGGggccgggcacggtgtctcacgcctgtaattccatcactttgggacgcccaggtgggtagatcatctgaggtcaggagtccgaga-------------------------------ccagcctg-gccaaggtggtgaaacactgtctc---------tactaaaag----tacaaaattagctt-----ggtatggtggcgggaacctgtaatcccacctgcttggaaggctagggcgggagaatcacttgaacctgggaggcagaggttgcagtgagccaagatcatgccactgcactccagcctgtgcaacaacagcgagactctgtctc--------aaaataaataaataaaagaaaaTACATTTTTTTTTAAAAAAGGCACTGTgactgggcatggtggttcacacctgtaatcccagcactttgggaagacgaggcaggtggatctgagatcaggagttcaagaagagcctggccaacatggtgaaataccgtctctgctaaaaattagcctggcatggtggcaggcgcctgtaatcccagctacccaggaggctgaggcaggagaattgcttgaacccaggaggcagagattgcagtgagccgagatcgcgccactgcactccagcctgggcaacagagctagactctgtctcaaaaaggaaacaaaaaaaaaaGGTATCTCCAAATTATGGTAGGGTGTCCATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47860478 713 + 51301725 ggtggatcatctgaggtcaggagtccgagaccagcctggccaaggtggtgaaaccctgtctctactaaaaataca----aaattagcttggtatggtggcaggagcctgtaatcccagctgcttggaaggctagggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccaagatcatgccactgcactccagcctgtgcaacaacagtgagacgctgtctcaaaataaataaataaaagaaaatacaaattttttttaaaaaggcactgTGACgtaaa----------------------------------------------aacccaggaggcggagcttgcagtgagctgagatccggccactgcactccagcctgggcgac-acagcgagactccgtctc--------aaaaaaaaaaaaaaaaa------------------aaaaaaggcactgtgactgggcatggtggttcacacctgtaatcctagcactttgagaagccgaggcaggtggatctgagatcaggagttcaagaagagcctggccaacatggtgaaataccatctctactaaaaattagcctggcatggtggcaggtgcctgtaatcccagctacccaggaggctgaggcaggagaattacttgaacctgggaggcagagattgcagtgagccgagatcacgccactgcactccagcctgggcaacagagcgagactctgtctcaaaaagg------aaaaaaaaggtacCTCCAAATTATGGTAGGGTGTCCATa i papAnu2.chr19 C 0 M 526 s chlSab2.chr6 47569252 733 + 50890351 ggagggccat-ggagcccaggagttcaagaccagcctggtgtacaaacggagacccagtctctatttaaaaaaGAGGGGGCGGGggccgggcacggtgtctcacgcctgtaattccatcactttgggacgcccaggtgggtggatcatctgaggtcaggagtccgaga-------------------------------ccagcctg-gccaaggtggtgaaacactgtctc---------tactaaaag----tacaaaattagctt-----ggtatggtggcgggagcctgtaatcccacctgcttggaaggctagggcgggagaatcacttgaacctgggaggcagaggttgcagtgagccaagatcatgccactgcactccagcctatgcaacaacagtgagactctgtctc--------aaaataaataaataaaagaaaatacaaaaTTTTTTTTAAAAGGCATTGTgactgggcatggtggttcacacctgtaatcccagcactttgggaagccgaggcaggtggatctgagatcaggagttcaagaagagcctggccaacatggtgaaataccgtctctgctaaaaattagcctggcatggtggcaggcacctgtaatcccagctacccaggaggctgaggccggagaattgcttgaacccaggaggcagagattgcagtgagccgagatcacgccactgcactccagcctgggcaacagagctagactctgtctcaaaaagg----aaaaaaaaaaGGTATCTCCAAATTATGGTAGGGTGTCCATA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e rheMac3.chr19 60614643 1276 + 64156825 I a score=258713.000000 s hg38.chr19_GL949747v2_alt 607064 301 + 729520 TTAAGAAGGTAGAAAAAggtcgggggaagtgg---atgcctgtaatcccagaactttgggaggctgaggcgggtggatcacctgaggtcaggagttcaagaacagcctggccaaaagggtatggtgaaaccccatctctactagaactacaaaattagccgggcgtggtggtacatgcctgtaatcccagctacacaggagtctgaggcaggagaatcacaggaaaccggcaggcagaggttgcagtgagctgagatcgcgccattgcactccagcctgggcgacaagagcaaaactccatctc s panTro4.chr19 59879076 304 + 63644993 TTAAGAAGGTAGAAAACGGTGGGGGGAAgtggctcatgcctgtaatcccagcactttgggaggctgaggcgggtggatcacctgaggtcaggagttcaagaacagcctggccaacagggtatggtgaaaccccgtctctactagaactacaaaattagccaggcgtggtggtacctgcctgtaatcccagctacacaggagtctgaggcaggagaatcacaggaaaccggcaggcagaggttgcagtgagctgagatcgcaccattgcactccagcctgggcgacaagagcaaaactccatctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56800046 304 + 60714840 TTAAGAAGATAGAAAAAAGTGGGGGGAAgtggctcgtgcctgtaatcccagcactttgggaggctgaggcgggtggatcacctgaggtcaggagttcaagaacagcctgaccaacagggtatggtgaaaccccgtctctactagaactacaaaattagccgggcatggtggtgcatgcctgtaatcccagctacacaggagtctgaggcaggagaatcacaggaaaccggcaggcagaggttgcagcgagctgagatcgcaccattgcactccagcctgggcgacaagagcaaaactccgtctc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55756190 304 + 59248254 TTAAGAAGGTAGAAAAAGGTGGGGGGAAgtggctcatgcctgtaatcccagcactttgggaggctaaggcaggtggatcacctgaggtcaggagttcaagaacagcctggccaacacggtatggtgaaaccccgtctctaataaaaatacaaaatttgccggctgtggtggtgtctgcctgtaatcccagctacacaggagtctgaggcaggagaatcacaagaacctggcaggcagaggttgcagtgagccgagatcacgccattgcactccagcctgggtgacaagagcgaaactccatctc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47569985 304 + 50890351 TTAAGAAGGTAGAAAAAGGTAGGGGGAAgtggctcatgcctgtaatcccagcactttgggaggctaaggcaggtggatcacctgaggtcaggagttcaagaacagcgtggccaatacggtatggtgaaaccctgtctctactaaaaatacaaaattagccggctgtggtgatgcctgcctgtaatcccagctacacaggagtctgaggcaggagaattacaagaacctggcaggcagaggttgcagtgagccgagatcacgccattgcactccagcctgggtgacaggagcgaaactccatctc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47861191 526 + 51301725 M e rheMac3.chr19 60614643 1276 + 64156825 I a score=8945.000000 s hg38.chr19_GL949747v2_alt 607365 7 + 729520 aaaaaaa s panTro4.chr19 59879380 7 + 63644993 aaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56800350 7 + 60714840 aaaaaag i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55756494 7 + 59248254 aaaaaaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47570289 7 + 50890351 aaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45922015 7 + 49145316 aaaaaaa i calJac3.chr22 I 7610 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47861191 526 + 51301725 M e rheMac3.chr19 60614643 1276 + 64156825 I a score=61855.000000 s hg38.chr19_GL949747v2_alt 607372 53 + 729520 -------------aaaaaaa----gaaaaaatgaaaaagaATTTATTGAAATGTGCAGTCTGAAAACTGC s panTro4.chr19 59879387 57 + 63644993 -------------aaaaaaaaaatgaaaaaatgaaaaAGAATTTATTGAAATGTGCAGTCTGAAAACTGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56800357 52 + 60714840 -------------aaaaaa-----gaaaaaaagaaaaagaaTTTATTGAAATGTGCAGTCTGAAAACTGC i ponAbe2.chr19 C 0 M 882 s rheMac3.chr19 60615919 51 + 64156825 -------------AAAAAAA----AAAAAAAAGAAAAATAATTCACTGAAATGTG--GTCTGAAAACTGC i rheMac3.chr19 I 1276 C 0 s macFas5.chr19 55756501 44 + 59248254 ------------------------aaaaaaaagaaaaataaTTCACTGAAATGTG--GTCTGAAAACTGC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47570296 44 + 50890351 ------------------------aaaaaaaagaaaaataaTTCACTGAAATGTG--GTCTGAAAACTGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45922022 66 + 49145316 agaagaagaaggagaagaag----aaaaagaacgaaaagaaTTTATTGAAATGTGCAGCCTAAAAACTGC i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47861191 526 + 51301725 M a score=7255.000000 s hg38.chr19_GL949747v2_alt 607425 7 + 729520 TCCT-GCA s panTro4.chr19 59879444 7 + 63644993 TCCT-GCA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60615970 8 + 64156825 TCCTGGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55756545 8 + 59248254 TCCTGGCA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47570340 8 + 50890351 TCCTGGCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45922088 8 + 49145316 TCCTGGCA i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47861191 526 + 51301725 M a score=44024.000000 s hg38.chr19_GL949747v2_alt 607432 54 + 729520 CATTTTCATTCATCCTTCCTATTCCCTCCATCCCTCA---Atttttttttttttttt s panTro4.chr19 59879451 57 + 63644993 CATTTTCATTCATCCTTCCTATTCCCTCCATCCCTCAtttttttttttttttttttt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60615978 54 + 64156825 CATTTTCATTCATCCTTCCTATTCCCTCCATCCCTCA---Ctttttttttttttttt i rheMac3.chr19 C 0 I 8 s macFas5.chr19 55756553 54 + 59248254 CATTTtcattcatccttcctattccctccatccctca---ctttttttttttttttt i macFas5.chr19 C 0 I 5 s chlSab2.chr6 47570348 53 + 50890351 CATTTTCATTCATCCTTCCTATTCCCTCCATCCCTTC---Cttttttttttttttt- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45922096 0 + 49145316 C e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47861191 526 + 51301725 M a score=3135.000000 s hg38.chr19_GL949747v2_alt 607486 10 + 729520 gagacagagt s panTro4.chr19 59879508 10 + 63644993 tagacagagt i panTro4.chr19 C 0 C 0 s macFas5.chr19 55756612 10 + 59248254 gagacagagt i macFas5.chr19 I 5 C 0 s chlSab2.chr6 47570401 8 + 50890351 gagac--agt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45922096 0 + 49145316 C e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47861191 526 + 51301725 M e rheMac3.chr19 60616032 8 + 64156825 I a score=41653.000000 s hg38.chr19_GL949747v2_alt 607496 49 + 729520 ttcgctcttgttgcccaggctggagtgcaatggcacgatctcagctcac s panTro4.chr19 59879518 49 + 63644993 ttcgctcttgttgcccaggctggagtgcaatggcacgatctcagctcac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317190 49 - 106955855 Ttcgctcttgttgcccaggctggagtataatggcgtgatctcagctcac i nomLeu3.chr10 M 2680 C 0 s macFas5.chr19 55756622 49 + 59248254 tttgctcttgttgtccaggctggaatgcaatggcgcaatctcagctcac i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47570409 49 + 50890351 tttgctcttgttgtccaggctggaatgcaatggcgcaatctcagctcac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45922096 0 + 49145316 C e papAnu2.chr19 47861191 526 + 51301725 M e rheMac3.chr19 60616032 8 + 64156825 I a score=107846.000000 s hg38.chr19_GL949747v2_alt 607545 229 + 729520 tgcaacctctgcctcccaggttccagccattttcctgcctcagcctccagaatagctggaattacaggcatctgccactacgcctggctaattttttgtgtatttttagtagagatgggatttcaccatgttggtcaggctgatctcgaact-cctgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggcatgaatcaccacgcccggccCC s panTro4.chr19 59879567 229 + 63644993 tgcaacctctgcctcccaggttccagcgattttcctgcctcagcctccagaatagctggaattacaggtatctgccactacgcctggctaattttttgtgtatttttagtagagatggggtttcaccatgttggtcaggctgatctcgaact-cctgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggcatgaaccaccacgcccggccCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317239 214 - 106955855 tgcaacctctgcctcccaggttcaagcgattttcctgcctcagcctccagaatagctggaattacaggcacctgccactacgcctagctaattttttgtgtatttttagtagagatgg-------tcat--------ggctggtctccaact-cccgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggtatgaaccaccacacctggccCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55756671 230 + 59248254 ggcaacctctgcctcccaggttcaagcaattttcctgcctcagcctccagaatagctggaattacaggcacctgccaccacgtccagctaatgttttgtgtatttttagtacacacggggtttcaccatgttggtcaggctggtctcaaactgcccgacctcaggtgatccacatgcctcggcttcccaatgtgctgggattacaggagtgaaccaccacacctggcccc i macFas5.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45922096 0 + 49145316 C e chlSab2.chr6 47570458 0 + 50890351 C e papAnu2.chr19 47861191 526 + 51301725 M e rheMac3.chr19 60616032 8 + 64156825 I a score=273.000000 s hg38.chr19_GL949747v2_alt 607774 1 + 729520 T s panTro4.chr19 59879796 1 + 63644993 T i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317453 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45922096 0 + 49145316 C e chlSab2.chr6 47570458 0 + 50890351 C e papAnu2.chr19 47861191 526 + 51301725 M e macFas5.chr19 55756901 0 + 59248254 C e rheMac3.chr19 60616032 8 + 64156825 I a score=13278.000000 s hg38.chr19_GL949747v2_alt 607775 40 + 729520 CATTTTCTTTTCTTtctttctttcttt-tttgtttgtttgt s panTro4.chr19 59879797 40 + 63644993 CACTTTCTTTTTATtctttctttcttt-tttgtttgtttgt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317454 39 - 106955855 CACTTTCTTTTT-TTCtttctttcttt-cttttttgtttgt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45922096 40 + 49145316 CATTTTCTTTCC-ttatttatttatttatttatttatttat i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e chlSab2.chr6 47570458 0 + 50890351 C e papAnu2.chr19 47861191 526 + 51301725 M e macFas5.chr19 55756901 0 + 59248254 C e rheMac3.chr19 60616032 8 + 64156825 I a score=16933.000000 s hg38.chr19_GL949747v2_alt 607815 30 + 729520 ttttgagacagagtcttgctc-tgtcaccca s panTro4.chr19 59879837 30 + 63644993 ttttgagacagagtcttgctc-tgtcaccca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317493 30 - 106955855 ttttgagacggagtctcgttc-tgtcgccca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60616040 31 + 64156825 ttttgagacagagttttgctcttgttgtcca i rheMac3.chr19 I 8 C 0 s calJac3.chr22 45922136 28 + 49145316 ttttgagatggagtctccctc-tgtcaga-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e chlSab2.chr6 47570458 0 + 50890351 C e papAnu2.chr19 47861191 526 + 51301725 M e macFas5.chr19 55756901 0 + 59248254 C a score=16576.000000 s hg38.chr19_GL949747v2_alt 607845 14 + 729520 ggctggagtgcagt s panTro4.chr19 59879867 14 + 63644993 ggctggagtgcagt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317523 14 - 106955855 ggctggagggcagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60616071 14 + 64156825 ggctggaatgcaat i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47861717 14 + 51301725 ggctggaatgcaat i papAnu2.chr19 M 526 C 0 s calJac3.chr22 45922164 14 + 49145316 ggctggagtgcagc i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e chlSab2.chr6 47570458 0 + 50890351 C e macFas5.chr19 55756901 0 + 59248254 C a score=138265.000000 s hg38.chr19_GL949747v2_alt 607859 87 + 729520 ggcgcgatctcagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggc s panTro4.chr19 59879881 87 + 63644993 ggcgcgatctcagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcctgagtagctaggactacaggc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317537 87 - 106955855 ggtgacatctcggctcactgcaagctccacctcccgggttcatgccatcctcctgcctcagcctcctgagtagctgggactacaggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60616085 87 + 64156825 ggcgcaatctcagctcacggcaacctctgcctcccaggttcaagcaattttcctgcctcagcctccagaatagctggaattacaggc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47861731 87 + 51301725 ggcgcaatctcagctcacggcaacctctgcctcccaggttcaagcaattttcctgcctcagcctccagaatagctggaattacaggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47570458 87 + 50890351 ggcgcaatctcagctcacagcaacctctgcctcccaggttcaagcgattttcctgcttcagcctccagaatagctggaattacaggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45922178 87 + 49145316 ggcgagatctcggctcaccacaacctcctcctcctggattcaagcgattctcctgcctcagcctcccaagtagctgggattacaggc i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e macFas5.chr19 55756901 0 + 59248254 C a score=159098.000000 s hg38.chr19_GL949747v2_alt 607946 157 + 729520 gcccgccaccacgcccggctaa--ttttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctccatct-cctgacctc--gtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgaggcaccacactgggc------------------------------------cCCC s nomLeu3.chr10 103317624 156 - 106955855 gcccgccaccacgcccggctaa--ttttttgtatttttagtagagacggggtttcaccgtgtcagccaggatggtctcgatct-cctgacctc--gtgatccgcccgcctcggcctcccaaagtgctgggattccaggcgtgagccaccgcgccgggc------------------------------------cCC- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60616172 161 + 64156825 acctgccaccacgcccagctaatgttttgtgtatttttagtacacacggggtttcaccatgttggtcaggctggtctcaaactgccagacctcaggtgatccacctgcctcggcttcccaatgtgctgggattacaggagtgaaccaccacacctggc------------------------------------cCC- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47861818 161 + 51301725 acctgccaccacgcccagctaatgttttgtgtatttttagtacacacggggtttcaccatgttggtcaagctggtctcaaactgcccgacctcaggtgatccacctgcctaggcttcccaatgtgctgggattacaggcgtgaaccaccacacctggc------------------------------------ccc- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47570545 161 + 50890351 acctgccaccacgcccagtcaatgttttgtgtatttttagtacacacggggtttcaccatgttggtcaggctggtctcaaactgcccgacctcaggtgatccacctgcctcggcttcccaatgtgctgggattacaggcatgaaccaccacacctggc------------------------------------cCC- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45922265 193 + 49145316 acacaccaccatgcccagctaat-ttttttgtatttttagtagagacagggtttcatcatgttggccaggatggtctcaatct-cttgacctt--gtgatccaccctcctcggcctcccaaagcgctgggattacaggcgtaaaccaccgcgcccggccTGGCAGATTTCATTCATCCTTTCTCTTCCCTCCATCCC- i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e macFas5.chr19 55756901 0 + 59248254 C e panTro4.chr19 59879968 0 + 63644993 C a score=1161886.000000 s hg38.chr19_GL949747v2_alt 608103 717 + 729520 TCACTTTCTTATTCTTTCTAGGATAGGCAACTGA-GCGCGGCAGTGAAGAGCTGGGCTTCCGGAAGCTGACAGCTGTTTGTGATCTTCAAgacctcagacaggttttctaaatatgccttgccttcattttctcaaggaaagtgaaaaatgggtaggatcatggcaatcactactgtgtagcaat-gtttagaggacttaataagtaaacacaGggtcaagcatggtggctcacaccggaaatcccagcactttggga-ggccgt---ggtgggaagattgcttaagcccatggggttgagaccagcctgggcaacatagtgagacctccatctctataaaa-aatacaaaaatctagtcaggcgtgatggcg-tatgcctgtagccttcagtaagctatgattgtgccactgcacaccagcctaggcgacagagtgagaccctgtctcaaaaagaa------aaaacgaaaagaaaTATAGATGTACATATACATATGTTGGTTCTAAAACATGAAAAAggctgggcgcggtggttcgtgcctgcaacccaagcactttgggaggccgaggcgggcggatcacgaggtcaagagtttgagaccagcctggccaacatagtgaaaccccatctctactaaaaatac------------------aaaaaAAAggctaggcgcagtggctcatgcctgtaatcctagcactttgggaggccgaggtgagcagattacctgaggttgggag s nomLeu3.chr10 103317780 733 - 106955855 TCACTTTCTTATTCTTTTTAGGATAGGCAACTGAAGCACAGCAGTGAAGAGATGGGCTTCCGGAAGCTGACAGCTGTTTGTGATCTTCAAGACCTCCGGCAGGTTTTAAAAATATGCCTTGCCTTCATTTTTTCAAGGAAAGTGAAAAAAGGGTAGGATCATGTCAATCGCTACTGTTTGGCAACAGTTTGGAGGAAGTAATAAGTAAATACAGggtcaagcatggtggctctcagtggaaaccccagcactttgggagggccgt---ggtgggaaggatgcttaagcccaaggggtagagaccagaatgggcaacatagtgagagccccgtctctataaaa-aacacaaaaatatagtcaggcgtgatggcg-tatgcctgtagcagtcagtgagctatgattatgccactgcacaccagcctaggcgacagagtgagaccctgtctcaaaaagaa------aaaacgaaaagaaaTATACATGTACATATACATATATTGGTTCTAAAACATGAAAAAggccgggcgtggtagctcatgcctgcaacccaagcacttcgggagtccgaggcggacggatcacgaggtctgaagtttgagaccaccctggccaacatagtgaaactccgtctctactaaaaatac-----aaaaaAAAAAAAAAAAAAAAAggctaggcgcagtggctcacgcctgtaatcctagcactttgggaggccgaggtgagcggattacctgaggttgggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60616333 732 + 64156825 TCACTTCCTTATTCTTCCTAGGATTGGCAACTGA-GCGCAGCAGTGAAGAGCTGGGCTTCCAGAAGCTGACAGCTGTTCGTGATCTTCAAGATCTCAGGCAGGTTTTCTAAATATACCTTGCCTTCATTTTCTCAAAGAATGTGAAAAATGGGTAAGGTCATGGCAATCACTACTGTGTAGCAAA-GTTTAGAGGACCTAATAAGTAAACACAGggtcaagcatggtggttcacgctggaaatcccagcacttcggga-ggccgt---ggtaggaagattgcttaagcccatggggttgagaccagcctgggcaacatagtgagacccccgtctctacaaaa-aatacaaaaatctagtaagacatgatgccg-tatgcctgtagccttcagtgagctatgattgtgccactgcacaccagcctaggtgac--agtgagaccctatctcaaaaagaaaaaaacaaaaaGGAAAGAAATATAGATGTACATATACATATATTGGTTCTAAAACATGGAAAAggccgggcacggtggctcctgcctgcaatccaaacacttcgggaggccgaggcgggcagatcactaggtcaggagtttgagaccagcctggccaacatagtgaaacctcgtctctactaaaaatac-------aaaaaaATAAAAATAAAAAggctaggcacagtggctcatgcctgtaatcctagcactttgggaggccgaggtgggtagattacctgaggttgggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55756901 732 + 59248254 tcacttccttattcttcCTAGGATAGGCAACTGA-GCGCAGCAGTGAAGAGCTGGGCTTCCAGAAGCTGACAGCTGTTCGTGATCTTCAAGATCTCAGGCAGGTTTTCTAAATATACCTTGCCTTCATTTTCTCAAAGAATGTGAAAAATGGGTAAGGTCATGGCAATCACTACTGTGTAGCAAA-GTTTAGAGGACCTAATAAGTAAACACAGggtcaagcatggtggttcacgctggaaatcccagcacttcggga-ggccgt---ggtaggaagattgcttaagcccatggggttgagaccagcctgggcaacatagtgagacccccgtctctacaaaa-aatacaaaaatctagtaagacatgatgccg-tatgcctgtagccttcagtgagctatgattgtgccactgcacaccagcctaggtgac--agtgagaccctatctcaaaaagaaaaaaacaaaaaGGAAAGAAATATAGATGTACATATACATATATTGGTTCTAAAACATGGAAAAggccgggcgcggtggctcctgcctgcaatccaaacacttcgggaggccgaggcgggcagatcactaggtcaggagtttgagaccagcctggccaacatagtgaaacctcgtctctactaaaaatac-------aaaaaAATAAAAATAAAAAggctaggcacagtagctcatgcctgtaatcctagcactttgggaggccgaggtgggtagattacctgaggttgggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47861979 735 + 51301725 tcacTTCCTTATTCTTCCTAGGATTGGCAACTGA-GCGCAGCAGTGAAGAGCTGGGCTTCCAGAAGCTGACAGCTGTTCGTGATCTTCAAGACCTCAGgcaggttttctaaatataccttGCCTTCATTTTCTCAAAGAATGTGAAAAATGGGTAAGGTCATGGCAATCACTACTGTGTAGCAAA-GTTTAGAGGACCTAATAAGTAAATACAgggtcaagcatggtggctcacactggaaatcccagcacttcggaa-ggccat---ggtaggaagattgcttaagcccatggggttgagaccagcctgggcaacatagtgagacccccgtctctacaaaa-aatacaaaaatctagtaAGACATGATGCCA-TATGCCTGTAgccttcagtgagctatgattgtgccactgcacaccagcctaggtgac--agtgagaccctatctcaaaaagaaaa----aaaaaggaaagaaatatagatgtacatatacatataccagTTCTAAAACATggaaaaggctgggcgcggtggcttctGCCTGCAATCcaaacacttcgggaggctgaggcgggcagatcacgaggtcaggagtttgagaccagcctggccaacatagtgaaacctcgtctctactaaaaatacaaaaaaaaaaaaaaaaaaaaaaaaaaggctaggcgcagtggctcatgcctgtaatcctagcactttgggaggccgaggtgggcagattacctgaggttgggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47570706 731 + 50890351 TCACTTTCTTATTCTTCCTAGGATTGGCAACTGA-GCGCAGTAGTGAAGAGCTGGGCTTCCAGAAGCTGACAGCTGTTCGTGATCTTCAAGATCTCAGGCAGGTTTTCTAAATATAGCTTGCCTTCATTTTCTCAAAGAATGTGAAAAATGGGTAGGGTCATGGCAATCACTACTGTGTAGCGAA-GTTTAGAGGACCTAATAAGTAAATACAGggtcaagcatggtggttcacgctggaaatcccagcacttcggga-ggccgt---ggtaggaagattgcttaagcccatggggttgagaccagcctgggcaacatagtgagacccccgtctctacaaaa-aatacaaaaatctagtaagacatgatgccg-tatgcctgtagccttcagtgagctatgattgtgccactgcacaccagcctaggtgac--agtgagaccctatctcaaaaagaaaaaaacaaaaaGGAAAGAAATATAGATGTACATATACATATATTGGTTCTAAAACATGAAAAAggccgggcgcggtggctcctgcctgcaatccaaacacttcgggaggctgaggcgggcggatcacgaggtcaggagtttgagaccagcccggccaacatagtgaaacctcgtctctacaaaaaatac--------aaaaaatAAAAATAAAAAggctaggcacagtggctcatgcctgtaatcctagcactttgggaagccgaggtgggcagattacctgaggttgggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45922458 714 + 49145316 TCACTTTCTGACTCTTTCTAGAAT-----------------------AGAGCTGGGCTTCC-GAAGCTCACAGCTGTTTGTGATCTTCAAGACCTCAGACAGGTTTTCTAAATATTTCTTCCCTTCATTTTCTCAAGGAACGTGAAAAGTGGGTAGGATCCTGGCAATCCCTGCTGTGGAGGAAA-GCTTAGAGGACCCAGTAAGTCAATAGAGggtcaagcatggtggctcatggctgaaatcccagcactctggga-ggccatggcggcgggaagatcgcttaagcccatgaggttgagaccagcctgggcaacatcgtgagatcaccatctctacaaaacaatatccaaatctagtcaggcatgagggcattatgcctgtagcctgcagtgagctatgattgtgccactgcactccagccagggcgacagagtgagaccctgactcaaaaagaa-acaacaaaaagaAAAGAAATACAGATGTAGACAGACATATGTTGGTTCTAAAGCATGAAAAAggctgggcacggtggctcacgcctgtaatcccagcactctgggagtccaatgccggcacatcaagaggtcaggagtttgagaccagcttggccaacatagtgaaaccctatctctactaaaaatac--------aaaaaaaaacaaaaaactagccgggtgtgctggcgggcgtctgtagtcccagctacttgggaggtggaggcaggaaaatcacttgaacccaggag i calJac3.chr22 C 0 I 1621 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e panTro4.chr19 59879968 0 + 63644993 C a score=97417.000000 s hg38.chr19_GL949747v2_alt 608820 83 + 729520 ttcaagaccaccctgtcc-aacatggtgaaaccccatctctactaaaaata-agaaaattagccgggtacagtggcacgcgcctg s nomLeu3.chr10 103318513 84 - 106955855 ttcaagaccagcctggcc-aacacggtgaaaccccatctctactaaaaatacaaaaaattagccgggtacagtggcacgcacctg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60617065 84 + 64156825 ttcaagaccaacctggccaaacatggtcaaaccccatctctactaaaaata-caaaaattagccgggtgcagtggcacacgcctg i rheMac3.chr19 C 0 M 676 s macFas5.chr19 55757633 84 + 59248254 ttcaagaccaacctggccaaacatggtcaaaccccatctctactaaaaata-caaaaattagccgggtgcagtggcacacgcctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47862714 84 + 51301725 ttcaaaaccaacctggccaaacatggtcaaaccccatctctactaaaaata-caaaaattagccgggtgccgtcacacgcgcctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47571437 84 + 50890351 ttccagaccaacctggccaaacatggtcaaaccccatctctactaaaaata-caaaaattagcccggtgcagtggcacgtgcctg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e panTro4.chr19 59879968 0 + 63644993 C a score=120684.000000 s hg38.chr19_GL949747v2_alt 608903 184 + 729520 taatcccagctattcaggaggctgaggcaggagaatcgcttgaactctggaggcggaggttgcagtgagccaagattgcgccactgcactccagcccgggcgacagtgccagactcagtctcagaaaaaaaaaaagc----------------------------------------------------------------------------------------aaaacaaaca-------aagaaACATGAAAAAAAGCTATAAAACCCAACttttt s nomLeu3.chr10 103318597 176 - 106955855 taatcccagctcttcaggaggctgaggcaggagaatcgcttgaactctggaggcagaggttgcagtgaactgagatcgcgccactgcactacagcccgggcgacagtgcaagaatcagtctc---aaaaaaaaaagc----------------------------------------------------------------------------------------aaaacaaac------------aacatgaaaaaaaGCTATAAAACCCAACTTTTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55757717 269 + 59248254 taatcccagctactcaggaggctgaggcaggagaatcgcttgaactctagaggaggaggttgcagtgagccgagatggtgccactgcactccagcccaggcgacagtg--agactctgtctccaaaaaaaaaaaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCaaaacaaaa--------aaaaaacatgaaaaaaagcaataaaaCTCAACTTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47862798 189 + 51301725 taatcccagctactcaggaggctgaggcaggagaatcgcttaaactctggaggaggaggttgcagtgagccgagatggtgccactgcactccagccccggcgacagtg--agactcagtctcaaaaaaaaaaaaaaa----------------------------------------------------------------------------------------aaaaaaaaaagcaaaacaaaaaaaatgaaaaaaagctataaaactcAACTTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47571521 178 + 50890351 taatcccagctactcaggaggctgaggcaggagaatcgcttgaactctgaaggaggaggttgcagtgagctgagatggtgccactgcactccagcccgggcgacagtg--agactctgtctccaaaaaaacaaagc-----------------------------------------------------------------------------------------aaaacaa----------aaaaaaCATGAAAAAAAGCTATAAAATTCAACTTTTT i chlSab2.chr6 C 0 I 9 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e rheMac3.chr19 60617149 676 + 64156825 M e panTro4.chr19 59879968 0 + 63644993 C a score=2670.000000 s hg38.chr19_GL949747v2_alt 609087 9 + 729520 tcttttttt s nomLeu3.chr10 103318773 9 - 106955855 AGTCTTATT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55757986 9 + 59248254 AGTCTTATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47862987 9 + 51301725 AGTCTTATT i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e chlSab2.chr6 47571699 9 + 50890351 I e rheMac3.chr19 60617149 676 + 64156825 M e panTro4.chr19 59879968 0 + 63644993 C a score=91.000000 s hg38.chr19_GL949747v2_alt 609096 1 + 729520 t s papAnu2.chr19 47862996 1 + 51301725 T i papAnu2.chr19 C 0 I 300 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e nomLeu3.chr10 103318782 0 - 106955855 C e chlSab2.chr6 47571699 9 + 50890351 I e macFas5.chr19 55757995 0 + 59248254 C e rheMac3.chr19 60617149 676 + 64156825 M e panTro4.chr19 59879968 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949747v2_alt 609097 466 + 729520 tttgagacggagtctcactctgtcgcccagggtggagtgcagtggtgcggtctcggctcactgcaacctccgcctcctgggttcaagcaattctctgcttcagcctcccaagtagctgggattacaggcacccgccaccacgcccgactaattttttgtatttttagttgagacggggtttcatcatcttggccaggctggtcttgaagtcctgacctcgtgatccacccgccttggcctcccaaagtgctggaattacaggcgtgagccaccgcgcccggccAAAACCCAACTTTTTAGTCTTATTTATATGGTGtttttttttttttttttttttttgagatggagccttgctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggt e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e nomLeu3.chr10 103318782 0 - 106955855 C e chlSab2.chr6 47571699 9 + 50890351 I e papAnu2.chr19 47862997 300 + 51301725 I e macFas5.chr19 55757995 0 + 59248254 C e rheMac3.chr19 60617149 676 + 64156825 M e panTro4.chr19 59879968 0 + 63644993 C a score=13576.000000 s hg38.chr19_GL949747v2_alt 609563 153 + 729520 gcccgccaccacgcccggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccacctgcctcggcctcccaaagtgctgggattacaggcgtgagccactgtgcccggc s panTro4.chr19 59879968 153 + 63644993 gcccaccaccatgccaggcaaattttttgtatttttagtagagacggggtttcaccgtgttagccaggattgtctcgatctcctgacctcgtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccactgcgcccggc i panTro4.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e nomLeu3.chr10 103318782 0 - 106955855 C e chlSab2.chr6 47571699 9 + 50890351 I e papAnu2.chr19 47862997 300 + 51301725 I e macFas5.chr19 55757995 0 + 59248254 C e rheMac3.chr19 60617149 676 + 64156825 M a score=24200.000000 s hg38.chr19_GL949747v2_alt 609716 26 + 729520 TATATGTTTACAAAATTAATACTGCC s panTro4.chr19 59880121 26 + 63644993 TATATGTTTACAAAATTAATACTGCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103318782 26 - 106955855 TATATGTTTACAAAATTAATACTGCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55757995 26 + 59248254 TATATGTTTACAAAATTAATACTGCC i macFas5.chr19 C 0 I 278 s chlSab2.chr6 47571708 26 + 50890351 TATATGTTTACAAAATTAATACTGCC i chlSab2.chr6 I 9 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e papAnu2.chr19 47862997 300 + 51301725 I e rheMac3.chr19 60617149 676 + 64156825 M a score=2865.000000 s hg38.chr19_GL949747v2_alt 609742 2 + 729520 Ag s panTro4.chr19 59880147 2 + 63644993 Ag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103318808 2 - 106955855 Ag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55758299 2 + 59248254 ag i macFas5.chr19 I 278 C 0 s papAnu2.chr19 47863297 2 + 51301725 ag i papAnu2.chr19 I 300 C 0 s chlSab2.chr6 47571734 2 + 50890351 Ag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e rheMac3.chr19 60617149 676 + 64156825 M a score=45357.000000 s hg38.chr19_GL949747v2_alt 609744 33 + 729520 ccaggcacggtggctcacgcctgtaatcccagc s panTro4.chr19 59880149 33 + 63644993 ccaggcacggtggctcacgcctgtaatcccagc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103318810 33 - 106955855 ccaggcacggtggctcacgcctgtaatcccagc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55758301 32 + 59248254 ccgggtgtggtggggg-cgcctgtggtcccagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863299 32 + 51301725 ccgggcctggtggggc-cgcctgtagtcccagc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47571736 33 + 50890351 ccaggcacggtgggtcacacctgtaatcccagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45924793 33 + 49145316 ctgggcatggtggctcaagcctgtaatcccagc i calJac3.chr22 I 1621 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e rheMac3.chr19 60617149 676 + 64156825 M a score=118763.000000 s hg38.chr19_GL949747v2_alt 609777 83 + 729520 actttaggaggctgaggctggcagatcacctgaggtcaggagtttgagac-------------------------------cagcctggccagcatggcaaaaccccgtct-----cta s panTro4.chr19 59880182 83 + 63644993 actttaggagggtgaggctggcagatcacctgaggtcaggagtttgagac-------------------------------cagcctggccagcatggcaaaaccccgtct-----cta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801291 83 + 60714840 actttaggaggctgaggctggcagatcacctgaggtcaggagtttgagac-------------------------------cagcctggccagcatggcaaaaccccgtct-----cta i ponAbe2.chr19 M 882 C 0 s nomLeu3.chr10 103318843 83 - 106955855 actttaggaggctgaggctggcggatcacctgaggtcaggagtttgagac-------------------------------cagcctggccagcatggcaaaaccccgtct-----cta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55758333 119 + 59248254 tactcgggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagccgagatcgcgccattgcactccagcctgggtgacagagcgagactccgtttaaaaaaaa i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47863331 114 + 51301725 tactggggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagccgagatcgcgccattgcactccagcctgggtgacagagcgagactctgttt-----aaa i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47571769 83 + 50890351 actttaagaggctgagactggtggatcacctgaggtcaggagtttgagat-------------------------------cagcctgggcagcatggcaaaactccgtct-----cta i chlSab2.chr6 C 0 I 306 s calJac3.chr22 45924826 81 + 49145316 actttgggaggccgaagtaggtggatca--tgaggtcaggagtttgagac-------------------------------cagcctgaccaagatggtgaaaccctgtct-----cta i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e rheMac3.chr19 60617149 676 + 64156825 M a score=-2136.000000 s hg38.chr19_GL949747v2_alt 609860 4 + 729520 tt----ga s panTro4.chr19 59880265 4 + 63644993 ct----ga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801374 4 + 60714840 ct----ga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103318926 8 - 106955855 ctaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55758455 4 + 59248254 ----aaaa i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47863448 4 + 51301725 ----aaaa i papAnu2.chr19 I 3 C 0 s calJac3.chr22 45924907 4 + 49145316 ct----ga i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e chlSab2.chr6 47571852 306 + 50890351 I e rheMac3.chr19 60617149 676 + 64156825 M a score=227109.000000 s hg38.chr19_GL949747v2_alt 609864 107 + 729520 aaaaaatacaaaaattaaccaggcgttgtggcgcatgcttgtaatctcagctactc--gggaggctgaggcaggggaatcacttgaagccggcaggcggaggctgcggg s panTro4.chr19 59880269 107 + 63644993 aaaaaatacaaaaattagccaggcgttgtggcgcatgcttgtaatctcagctactc--gggaggctgaggcaggggaatcgcttgaagccggcaggcggaggctgcggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801378 107 + 60714840 aaaaaatacaaaaattagccaggcgttgtggcgcatgcttgtaatctcagctactc--gggaggctgaggcaggggaatcgcttgaacccggcaggcggaggctgcggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103318934 107 - 106955855 aaaaaatgcaaaaatcagccaggcgttgtggcgcatgcttgtaatcccaaatactc--aggaggctgaggcaggagaatcgcttgaacccggcaggcggaggctgcggg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55758459 107 + 59248254 aaaaaattgaaaaattagccaggcgttgcggcgcatgcctgtaatcccagctactc--gggtggctgaggcaggagaatcgctcgaacccaggaggcggaggctgcaag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863452 107 + 51301725 aaaaaattcaaaaattagccaggcgttgcggcgcatgcctgcaatcccaggtactc--gggtggctgaggcaggagaatcgctcgaacccgggaggcggaggctgcaag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572158 107 + 50890351 aaaaaattcaaaaattagccaggtgttgcggcgcatgcctgtaatcccagctactc--gggtggctgaggcaggagaatcgctcgaacccgggaggcggaggctgcaag i chlSab2.chr6 I 306 C 0 s calJac3.chr22 45924911 106 + 49145316 ---aaatacaaaaattagcgaggtgtggtggcaggcgcctgtaatcccagatactcaggggaggctcaggcaggagaatcatttgaacccaagaggcggagattgcagt i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e rheMac3.chr19 60617149 676 + 64156825 M a score=159877.000000 s hg38.chr19_GL949747v2_alt 609971 62 + 729520 gagccgagatcgtgccgttgcactccagcctggggaac-agagcaagactcca--ttaaaaataa s panTro4.chr19 59880376 62 + 63644993 gagccgagatcgtgccgttgcactccagcctggggaac-agagcaagactcca--ttaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801485 62 + 60714840 gagccaagatcgtgccattgcactccagcctggggaac-agagcaagactcca--ctaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319041 62 - 106955855 gagccgagatcctgccattgcattccagcctgggcaac-agagcaagactcca--ctaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60617825 62 + 64156825 gagccgagatcatgccattgcactccagcctgggcaac-taaacaagactcca--ttaaaaataa i rheMac3.chr19 M 676 C 0 s macFas5.chr19 55758566 62 + 59248254 gagccgagatcatgccattgcactccagcctgggcaac-taaacaagactcca--ttaaaaataa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863559 62 + 51301725 gagccgagatcacgccattgcactccaacctgggcaac-taaacaagactcca--ttaaaaataa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572265 62 + 50890351 cagccgagatcacgccattgcactccagcctggacaac-taaacaagactcca--ttaaaaataa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925017 65 + 49145316 gagctgaaattgtgccattgcagtccagcttgggcaacaagagtgaaactctgtctcaaaaatta i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I a score=-5763.000000 s hg38.chr19_GL949747v2_alt 610033 3 + 729520 aa----t s panTro4.chr19 59880438 2 + 63644993 aa----- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801547 7 + 60714840 aaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319103 7 - 106955855 aaaaaaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47863621 1 + 51301725 ------t i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572327 1 + 50890351 ------t i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925082 6 + 49145316 -attatt i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e macFas5.chr19 55758628 0 + 59248254 C e rheMac3.chr19 60617887 0 + 64156825 C a score=-4658.000000 s hg38.chr19_GL949747v2_alt 610036 5 + 729520 --aataa s panTro4.chr19 59880440 3 + 63644993 --aaT-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801554 3 + 60714840 --aaT-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319110 5 - 106955855 --aaaaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47863622 2 + 51301725 --aa--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572328 2 + 50890351 --aa--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925088 2 + 49145316 --aa--- i calJac3.chr22 C 0 I 13 s canFam3.chr1 20035636 5 - 122678785 aaaat-- i canFam3.chr1 I 23589 C 0 e macFas5.chr19 55758628 0 + 59248254 C e rheMac3.chr19 60617887 0 + 64156825 C a score=979316.000000 s hg38.chr19_GL949747v2_alt 610041 313 + 729520 taaTACTGTGAATGTGAAACTGATGAACTTGGTGCTTTTCATGCGTCTCATA-GTTGACGTGTCATTGATATTTCACTTGAAATACGGTTGGATTTTTATTAATAATATACCTGGGGTGATGGGAGAAGGTAGCCAATCACAGCTGAGGCTTCTAAGcggtgattctcagcctcggccgcaatcacaattatctgggactctcgaaagaactccagggtctgggcagtcccagtgtaaccaatcaagcagaatctctaggcgttcgtgctttgaaatgaggctccacataggtaagtttaacaggcagtcaaga s panTro4.chr19 59880443 313 + 63644993 TAATACTGTGAATGTGAAACTGATGAACTTGGTGCTTTTCATGCGTCTCATA-GTTGACGTGTCATTGATATTTCACTTGAAATACGGTTGGATTTTTATTAATAATATACCTGGGGTGATGGGAGAAGGTAGCCAATCACAGCTGAGGCTTCTAAGcggtgattctcagcctcggccgcaatcacaattatctgggactctcgaaagaactccagggtctgggcagccccagtgtaaccaatcaagcagaatctctgggcgttcgtgctttgaaatgaggctccacataggtaagtttaacaggcagtcaaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801557 313 + 60714840 TAGTACTGTGAATGTGAAACTGATGAACTTGGTGCTTTTCATGTGTCTCATA-GTTGACGTGTCATTGATATTTCACTTGAAATACGGTTGGATTTTTATTAATAATATATCTGGGGTGATGGGAGAAGGTAGCCAATCACAGCTGAGGCTTCTAAGcggtgattctcagcctcagcggcaatcacaattatctggggctctcgaaagaactccagggtctgggcagcgccagtctgaccaatcaagcagaatctctgggcgtTCGTGCTTTGAAATGAGGCTCCAGATAGGTAAGTTTAACAGGCAGCCAAGA i ponAbe2.chr19 C 0 I 1096 s nomLeu3.chr10 103319115 313 - 106955855 aaaTACTGTGAGTGTAAAACTGATGAACTTGGTGCTTTTCATGTGTCTCATA-GTTGACGTGTCATTGATACTTCACTTGAAGTACGGTTGGATTTTTATTAATAATATACCTGGGGTGATGGGAGAAGGTAACCAATCACAGCTGAGGTTTCTAAGcggtgattttcagcctcggcggcaatcacaattatctgggactctctaaagaactccagggtctgggccgccccagtctgaccaatcaagcagaatctctgggcgtttgtgctttgaaatgaggctccagataggtaagtttaacaggcagctaaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60617887 304 + 64156825 taaTACTGTGAGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTA-GTTGACGTGTCATTGATAGTTCACTTGAAATGCGGTTGGATTTTTAT---TAATATACTTGGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGCGGTGATcctca------gcggcaatcacaattatctgggactctttaaagaactccagggtctgggcagccgcagtttaactcatcaaccagcatctctgggcgttcgtgctttgaaatgaggccccagatgggtaagtttaacaggcagcctaga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55758628 304 + 59248254 taaTACTGTGAGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTA-GTTGACGTGTCATTGATAGTTCACTTGAAATGCGGTTGGATTTTTAT---TAATATACTTGGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGCGGTGATcctca------gcggcaatcacaattatctgggactctttaaagaactccagggtctgggcagccgcagtttaactcatcaaccagcatctctgggcgttcgtgctttgaaacgaggccccagatgggtaagtttaacaggcagcctaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863624 307 + 51301725 taatactgtgaGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTA-GTTGACGTGTCATTGATATTTCACTTGAAATGCGGTtggatttttattaataatatacttGGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGCGGTGATTCTCA------GCGGCAATCACAATTATCTGGGACTCTTTAAAGAACTCCAGGGTCTGGGCAGCTGCAGTTTAACTCATCAACCAGCATCTCTGGGCGTTCGTGCTTTGAAATGAGGCCCCAGATGGGTAAGTTTAACAGGCAGCCTAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572330 307 + 50890351 taaTACTGTGAGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTA-GTTGACATGTCATTGATATTTCACTTGAAATGCGGTTGGATTGTTATTAATAATATACTTAGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGcagtgattctca------gcggcaatcacaattatctgtgactctttaaagaactccagggtctgggcagccgcagtttaactcatcaaccggcatctctgggcgttcgtgctttgaaatgaggccccagatgggtgagtttaacaggcagcctaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925103 306 + 49145316 taatACCGCCAGTGTAAAACTGATGAATTTGGTGCTTTTCATGTGTCCCATA-GTTGACGTGTCATTGATACTTAACTGGAAATGCAGTTGGATTTTTATTAAGAATATGCCTCGTGTGGT-GGAGAAGGGAGCCAGTCGCAGCTGAGGCTTCTAAGcggtgattctcagacca-tcagcaatcgtaattatctgggactc----aagaactccagtatctgagcggcccgaatctgaccaatcaaccagaatctctgggtgtttgtactttaaaatgaggccccagataggtaagttt-acaggcagccaagg i calJac3.chr22 I 13 C 0 s canFam3.chr1 20035641 303 - 122678785 taatattgtcagtataaaactggtgaacttg--gctattgatgtatcttttgtatttacatgtcacttacatttaacatgaaatgttggtggacttttag---------atctggtatgaCAGAAGGGGGTGGCTATTCACAGCTGAACTTCCTGAGcagtgattctcaagattggctgcaattaaaatcatctggagatctttaaaaaacttcagtgactgggcagcccccatctgattaacaaatcagaatatctgggaaccgacactttcaaatgatgccccagggaggtgggttctacatgtggacaagg i canFam3.chr1 C 0 C 0 a score=99099.000000 s hg38.chr19_GL949747v2_alt 610354 57 + 729520 tggaggaccacAGGT---GGAGATCGGGAAGCTCA-GGTGAAGGACCG-CCCCCCAACACCC s panTro4.chr19 59880756 57 + 63644993 tggaggaccacAGGT---GGAGATCGGGAAGCTCA-GGTGAAGAACCG-CCCCCCAACACCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56802966 57 + 60714840 ttgagaaccacAGGT---GGAGATGGGGAAGCTCA-GGTGAGGAATCG-CCGCCCACCACCC i ponAbe2.chr19 I 1096 C 0 s nomLeu3.chr10 103319428 58 - 106955855 ctgagaaccacAGGT---GGAGATCGGGAAGGTCA-GGTGAGGAATCGCCCCCCCACCACTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60618191 47 + 64156825 ttgagaaccacAGGT---GCAGAACCGGAAGCTCA-GGTCAGGCATTG----------A-CC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55758932 47 + 59248254 ttgagaaccacAGGT---GCAGAACCGGAAGCTCA-GGTCAGGCATTG----------A-CC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863931 48 + 51301725 TTGGGAACCACAGGT---GCAGATCCGGAAGCTCA-GGTCAGGCATTG----------Accc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572637 47 + 50890351 ttgggaaccacAGGT---GCAGATCCGGAAGCTCA-GGTCAGGCATTG----------A-CC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925409 50 + 49145316 ttgagaaccacAGGT---GTAGATGGGGAAGCTCA-GGTGAGGAGTCA--------GCACCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20035944 51 - 122678785 ttaagaacctctgGTCTAGGAGAAGGTGAGGCTCACACTAAGGAAATG----------GTC- i canFam3.chr1 C 0 C 0 a score=14825.000000 s hg38.chr19_GL949747v2_alt 610411 14 + 729520 CCCGCCCCCAAAAG s panTro4.chr19 59880813 14 + 63644993 CCCGCCCCCAAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803023 14 + 60714840 CCCGCCCCCAAATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319486 14 - 106955855 CCCGTCCCCAAACG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60618238 11 + 64156825 CCCGCCCCC---CG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55758979 11 + 59248254 CCCGCCCCC---CG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863979 11 + 51301725 cccgccccc---cG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572684 11 + 50890351 CCCGCCCCC---CG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20035995 3 - 122678785 ----TCC------- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45925459 0 + 49145316 C a score=635579.000000 s hg38.chr19_GL949747v2_alt 610425 227 + 729520 ACCTCTCAGTAATTCCGGTGGATACAGGAAGTGCTCAGCAACGATTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGAGAAAGAAGCC---TTAATAGA-GCTTTCTCAACCTGCAGCCCTCATCTCCGCCGGCGAGTAGGGCCAGGTGTTGG-GAGGTGAGTAGCTCTCCGGCAGCTCTGCAACTTCATTTCTTTATTTCTCCATTCCACAGT---------------T--------GGTAAAATttctcct--- s panTro4.chr19 59880827 227 + 63644993 ACCTCTCAGTAATTCCGGTGGATACAGGAAGTGCTCAGCAACGATTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGAAAGAGAAGCC---TTATTAGA-GCTTTCTCAACCTGCAGCCCTCATCGCCGCCGGAGAGTAGGGCCAGTTGTTGA-GAGGTGAGTAGCTCTCCGGCAACTCTGCAACTTCATTTCTTTATTTCTCCATTCCACAGT---------------T--------GGTAAAATttctcct--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803037 227 + 60714840 ACCTCTCAGTAGTTCCGGTGGATACAGGAAGTGCTCAGCAAGGATTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGAAAGAGAAGCC---TTATTAGA-GCTTTCTCCACCTACAGCCCCCATCGCCGCCGGAGAGTAGGGCCAGGTGTTGG-GTGGTGAGTAGCTCTCCGGCAAGTCTGCAACTGCATTTGTTTATTTCTCCATTCCATAGT---------------T--------GGTAAAATTTCTCCt--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319500 227 - 106955855 ACCCCCCAGTAATTCCGGTGGATACAGGAAGTGCTCAGCAGCGATTACGCCCCGTGGGCCAATCACAGGGC-TGCGGCCGAACGAGAAGCC---TTATTAGA-GCTTTCTCAACCTACAGCCCTCACCGCCGCCGGAGAGTAGGGCCAGGTGCTGG-GAGGTGAGTGGCTCTCCGGCAACTCTGCAACTTCCTTTCTTTATTTCTCCATTCCACAGT---------------T--------GGTAAAAtttctcct--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60618249 228 + 64156825 ACCTTTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGGTTTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGA--GAGGAGCCTTTTTATTAGC-GCTTTCTCAGCCTCCATCCCTCAGTGCCGCCGGGGAGTGGTGCCAGGTGTTAC-GAGGTGAGTATCTCTCCGGCAACTCTGCAACTTCATTTCTTTCTTTCTCCATTCCACAGT---------------T--------GGTAAAATGTCTCCT--- i rheMac3.chr19 C 0 T 590 s macFas5.chr19 55758990 228 + 59248254 ACCTTTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGGTTTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGA--GAGGAGCCTTTTTATTAGC-GCTTTCTCAGCCTCCATCCCTCAGTGCCGCCGGGGAGTGGTGCCAGGTGTTAC-GAGGTGAGTATCTCTCCGGCAACTCTGCAACTTCATTTCTTTCTTTCTCCATTCCACAGT---------------T--------CGTAAAATGTCTCCt--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863990 226 + 51301725 ACCTCTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGGATTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGA--GAGAAGCCTTTTTATTAGA-ACTTTCTCGGCCTACATCCCTCAGTGCCGCCGGGGAGTGGTGCCAGGTGTTAG-GAGGTGAGTAGCTCTCCGGCAGCTCTGcaacttcatttctttatttctcccttccaCAGT---------------t--------ggtaaaatttcct----- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572695 228 + 50890351 ACCTTTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGAATTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGA--GAGAAGCCTTTTTATTAGA-ACTTTCTCGGCCTACGTCGCTCAGTGCCGCCGGGGAGTGGGGCCAGGTGTTAG-GAGGTGAGTAGCTCTCCGGCAGCTCTGCAATTTCATTTCTTTATTTCTGCATTCCACAGT---------------T--------GGTAAAAtttctcct--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925459 239 + 49145316 GCCTCCCAGGATTCCTGGTGGGTACAGGAAGTGCCCAGCAATGGTCAGGCCCTGAGGACCAATCACAGG---TGGGGCAGAAAGAGAAACCTTTTTATTAGC-GCCTTCTCAGCCTCCGGCACTCAG---AGCCGGGGAGTAGGGCCAGGCCTTGG-GAGGTGAGTAGCTGCTGGGCAACCCTGCGGCTTCATTTCTGTGTTTCTCCATTCCACAGTTAGTTGTTGTCTCTAT--------GGTAAAAttcctcc---- i calJac3.chr22 C 0 C 0 s canFam3.chr1 20035998 233 - 122678785 ACCTATCAGTAACCATGCTGGATGCAGGAAGTTCTTTGCAATGG----GTCCCAAGGGCCAATCACAGAGCTTGAGGCAGAACAAGAGACTCCTTTATCGGAGGCTTTTTACACCTGCAGCACTCA---CAACCAGAGAGGAGC-CCTGGTGCTGGAGAGGTAAGTAACATCCCTGCTTCTTT---ACTTCATTTCTCCATTTCCTTATTCAACTGT---------------TAAATCCGCAATAAAAATCTTCCTCCC i canFam3.chr1 C 0 C 0 a score=1530.000000 s hg38.chr19_GL949747v2_alt 610652 16 + 729520 tttatttcatata-ttt s panTro4.chr19 59881054 16 + 63644993 tttatttcatata-ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803264 17 + 60714840 tttatttcatatatttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319727 6 - 106955855 ttt-----------ttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759218 12 + 59248254 ----ctttttttt-ttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864216 5 + 51301725 -----------tt-ttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572923 14 + 50890351 --ttttttttttt-ttt i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20036231 15 - 122678785 -TTTCTTTGAATA-TTT i canFam3.chr1 C 0 I 5018 e calJac3.chr22 45925698 0 + 49145316 C e rheMac3.chr19 60618477 590 + 64156825 T a score=307678.000000 s hg38.chr19_GL949747v2_alt 610668 156 + 729520 ttttt---ctgagacggagtctcgctctgtcgcccaggctggagtgcagtggcgcgatctctgctcactgcaagctc---cgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcccggctaa s panTro4.chr19 59881070 156 + 63644993 ttttt---ttgagacgaagtctcgctctgtcgcccaggctggagtgcggtggcccgatctcggctcactgcaagctc---cgcctcccgggttcccgccattctcccgcctcagcctcccgagtagctgggactacaggtgcccgccaccacgcccggctaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803281 156 + 60714840 ttttt---ttgggacgaagtctcgctctgtcgcccaggctggagtgaggtggcgcgatctcggctcactgcaagctc---cgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcccagctaa i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 103319733 156 - 106955855 ttttt---ttgagacggaatctcgctctgtcgcccaggctggggtgcattggcgccatcttggctcactgtgagctc---cgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccaggcctggctaa i nomLeu3.chr10 C 0 I 13 s macFas5.chr19 55759230 157 + 59248254 ttttt-aattgagacagagtcttgctgtgtcgcccaggctggggtgtagtggggagatctcggctcactgcaaactc---cgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcg-ccgccaccacgcccggctaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864221 155 + 51301725 ttttt---ttgagacggagtctcactctgtcgcccaggctggagtgcagtggcctgatctcagctcac-gcaagctc---cacctcctgggtttacgccattctcctgcctcagcctcccgagtacctgggactacaggcgcccgccacttcgcccggctaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572937 158 + 50890351 tttttaaattgagacagagtctcgctgtgtcgcccaggctggagtgcagtggggagatttcagctcactgcaagctc---cgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcg-ccgccaccacgcccggctaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925698 150 + 49145316 ttttt---ttgagac--agtctcactttgtcacccgggctagagtgcagtggtgcaatcaca------ttcaagcttgaacacctcccaggttcaagggagtttcatgcctcagcctcctgagtagct-ggactataggcatgagccaccacacatggccaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 590 + 64156825 T a score=2202.000000 s hg38.chr19_GL949747v2_alt 610824 4 + 729520 --tttt s ponAbe2.chr19 56803438 4 + 60714840 --tttt i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 103319902 4 - 106955855 --tttt i nomLeu3.chr10 I 13 C 0 s macFas5.chr19 55759387 4 + 59248254 --tttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864376 4 + 51301725 --gttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47573095 4 + 50890351 --tttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925848 4 + 49145316 CATT-- i calJac3.chr22 C 0 T 938 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=5993.000000 s hg38.chr19_GL949747v2_alt 610828 5 + 729520 ttgta s ponAbe2.chr19 56803442 5 + 60714840 ttgta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319906 5 - 106955855 ttgta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759391 5 + 59248254 ttgca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864380 5 + 51301725 ttgta i papAnu2.chr19 C 0 T 1070 s chlSab2.chr6 47573099 5 + 50890351 ttgca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45925852 938 + 49145316 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=910.000000 s hg38.chr19_GL949747v2_alt 610833 1 + 729520 t s ponAbe2.chr19 56803447 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319911 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759396 1 + 59248254 t i macFas5.chr19 C 0 T 1080 s chlSab2.chr6 47573104 1 + 50890351 t i chlSab2.chr6 C 0 T 947 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45925852 938 + 49145316 T e papAnu2.chr19 47864385 1070 + 51301725 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=2211.000000 s hg38.chr19_GL949747v2_alt 610834 8 + 729520 ttttagta s ponAbe2.chr19 56803448 8 + 60714840 ttttagta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319912 8 - 106955855 ttttagta i nomLeu3.chr10 C 0 T 980 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45925852 938 + 49145316 T e chlSab2.chr6 47573105 947 + 50890351 T e papAnu2.chr19 47864385 1070 + 51301725 T e macFas5.chr19 55759397 1080 + 59248254 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=100.000000 s hg38.chr19_GL949747v2_alt 610842 1 + 729520 g s ponAbe2.chr19 56803456 1 + 60714840 g i ponAbe2.chr19 C 0 T 893 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45925852 938 + 49145316 T e nomLeu3.chr10 103319920 980 - 106955855 T e chlSab2.chr6 47573105 947 + 50890351 T e papAnu2.chr19 47864385 1070 + 51301725 T e macFas5.chr19 55759397 1080 + 59248254 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949747v2_alt 610843 8 + 729520 gtggctca e canFam3.chr1 20036246 5018 - 122678785 I e ponAbe2.chr19 56803457 893 + 60714840 T e calJac3.chr22 45925852 938 + 49145316 T e nomLeu3.chr10 103319920 980 - 106955855 T e chlSab2.chr6 47573105 947 + 50890351 T e papAnu2.chr19 47864385 1070 + 51301725 T e macFas5.chr19 55759397 1080 + 59248254 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=15805.000000 s hg38.chr19_GL949747v2_alt 610851 103 + 729520 cgcctgtaatcccagcactttaggaggctgaggctggcagatcacctgaggtcgggagtttgaga-------------------------------ccagcctggccagcatggcaaaaccccgtct--------ctattga s macFas5.chr19 55758317 142 + 59248254 cgcctgtggtcccagctactcgggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagccgagatcgcgccattgcactccagcctgggtgacagagcgagactccgtttaaaaaaaaaaaaaaa i macFas5.chr19 T 1080 C 0 s papAnu2.chr19 47863315 137 + 51301725 cgcctgtagtcccagctactggggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagccgagatcgcgccattgcactccagcctgggtgacagagcgagactctgttt-----aaaaaaaaaa i papAnu2.chr19 T 1070 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e ponAbe2.chr19 56803457 893 + 60714840 T e calJac3.chr22 45925852 938 + 49145316 T e nomLeu3.chr10 103319920 980 - 106955855 T e chlSab2.chr6 47573105 947 + 50890351 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=3276.000000 s hg38.chr19_GL949747v2_alt 610954 6 + 729520 aaaaaa s macFas5.chr19 55758459 6 + 59248254 aaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863452 6 + 51301725 aaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572158 6 + 50890351 aaaaaa i chlSab2.chr6 T 947 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e ponAbe2.chr19 56803457 893 + 60714840 T e calJac3.chr22 45925852 938 + 49145316 T e nomLeu3.chr10 103319920 980 - 106955855 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=91751.000000 s hg38.chr19_GL949747v2_alt 610960 84 + 729520 tacaaaaattaaccaggcgttgtggcgcatgcttgtaatctcagctactc--gggaggctgaggcaggggaatcacttgaagccgg s nomLeu3.chr10 103318940 84 - 106955855 tgcaaaaatcagccaggcgttgtggcgcatgcttgtaatcccaaatactc--aggaggctgaggcaggagaatcgcttgaacccgg i nomLeu3.chr10 T 980 C 0 s macFas5.chr19 55758465 84 + 59248254 ttgaaaaattagccaggcgttgcggcgcatgcctgtaatcccagctactc--gggtggctgaggcaggagaatcgctcgaacccag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863458 84 + 51301725 ttcaaaaattagccaggcgttgcggcgcatgcctgcaatcccaggtactc--gggtggctgaggcaggagaatcgctcgaacccgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572164 84 + 50890351 ttcaaaaattagccaggtgttgcggcgcatgcctgtaatcccagctactc--gggtggctgaggcaggagaatcgctcgaacccgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45924914 86 + 49145316 tacaaaaattagcgaggtgtggtggcaggcgcctgtaatcccagatactcaggggaggctcaggcaggagaatcatttgaacccaa i calJac3.chr22 T 938 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e ponAbe2.chr19 56803457 893 + 60714840 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=106635.000000 s hg38.chr19_GL949747v2_alt 611044 87 + 729520 caggcggaggctgcggggagccgagatcgtgccgttgcactccagcctggggaac-agagcaagactcca--ttaaaaataaaataataa s ponAbe2.chr19 56802564 87 + 60714840 Caggcggaggctgcggggagccaagatcgtgccattgcactccagcctgcgtaac-agagcaagactcca--ctaaaaaaaaaaaaaaaa i ponAbe2.chr19 T 893 I 2 s nomLeu3.chr10 103319024 87 - 106955855 caggcggaggctgcggggagccgagatcctgccattgcattccagcctgggcaac-agagcaagactcca--ctaaaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 I 4 s macFas5.chr19 55758549 79 + 59248254 gaggcggaggctgcaaggagccgagatcatgccattgcactccagcctgggcaac-taaacaagactcca--ttaaaaataa-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863542 82 + 51301725 gaggcggaggctgcaaggagccgagatcacgccattgcactccaacctgggcaac-taaacaagactcca--ttaaaaataataa----- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572248 82 + 50890351 gaggcggaggctgcaagcagccgagatcacgccattgcactccagcctggacaac-taaacaagactcca--ttaaaaataataa----- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925000 90 + 49145316 gaggcggagattgcagtgagctgaaattgtgccattgcagtccagcttgggcaacaagagtgaaactctgtctcaaaaattaattattaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=431795.000000 s hg38.chr19_GL949747v2_alt 611131 200 + 729520 -------------taaTACTGTGAATGTGAAACTGATGAACTTGGTGCTTTTCATGCGTCTCATAGTTGACGTGTCATTGATATTTCACTTGAAATACGGTTGGATTTTTATTAATAATATACCTGGGGTGATGGGAGAAGGTAGCCAATCACAGCTGAGGCTTCTAAGcggtgattctcagcctcggccgcaatcacagttatctgggactc s ponAbe2.chr19 56802653 200 + 60714840 -------------TAGTATTGTGAATGTGAAACTGATGAACTTGGTGCTTTTCATGTGTCTCATAGTTGACGTGTCATTGATATTTCACTTGAAATACGGTTGGATTTTTATTAATAATATATCTGGGGTGATGGGAGAAGGTAGCCAATCACAGCTGAGGCTTCTAAGcggtgattctcagcctcagcggcaatcacaattatctggggctc i ponAbe2.chr19 I 2 C 0 s nomLeu3.chr10 103319115 200 - 106955855 -------------aaaTACTGTGAGTGTAAAACTGATGAACTTGGTGCTTTTCATGTGTCTCATAGTTGACGTGTCATTGATACTTCACTTGAAGTACGGTTGGATTTTTATTAATAATATACCTGGGGTGATGGGAGAAGGTAACCAATCACAGCTGAGGTTTCTAAGcggtgattttcagcctcggcggcaatcacaattatctgggactc i nomLeu3.chr10 I 4 C 0 s rheMac3.chr19 60617887 191 + 64156825 -------------taaTACTGTGAGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTAGTTGACGTGTCATTGATAGTTCACTTGAAATGCGGTTGGATTTTTAT---TAATATACTTGGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGCGGTGATcctca------gcggcaatcacaattatctgggactc i rheMac3.chr19 T 590 C 0 s macFas5.chr19 55758628 191 + 59248254 -------------taaTACTGTGAGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTAGTTGACGTGTCATTGATAGTTCACTTGAAATGCGGTTGGATTTTTAT---TAATATACTTGGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGCGGTGATcctca------gcggcaatcacaattatctgggactc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863624 194 + 51301725 -------------taatactgtgaGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTAGTTGACGTGTCATTGATATTTCACTTGAAATGCGGTtggatttttattaataatatacttGGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGCGGTGATTCTCA------GCGGCAATCACAATTATCTGGGACTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572330 194 + 50890351 -------------taaTACTGTGAGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTAGTTGACATGTCATTGATATTTCACTTGAAATGCGGTTGGATTGTTATTAATAATATACTTAGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGcagtgattctca------gcggcaatcacaattatctgtgactc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925090 211 + 49145316 ttaattaattaattaatACCGCCAGTGTAAAACTGATGAATTTGGTGCTTTTCATGTGTCCCATAGTTGACGTGTCATTGATACTTAACTGGAAATGCAGTTGGATTTTTATTAAGAATATGCCTCGTGTGGT-GGAGAAGGGAGCCAGTCGCAGCTGAGGCTTCTAAGcggtgattctcagacca-tcagcaatcgtaattatctgggactc i calJac3.chr22 C 0 I 158 e canFam3.chr1 20036246 5018 - 122678785 I e panTro4.chr19 59881226 0 + 63644993 C a score=250576.000000 s hg38.chr19_GL949747v2_alt 611331 166 + 729520 tcgaaagaactccagggtctgggcagtcccagtgtaaccaatcaagcagaatctctaggcgttcgtgctttgaaatgaggctccacataggtaagtttaacaggcagtcaagatggaggaccacAGGTGGAGATCCGGAAGCTCAGGTGAAGGACCGCCCCCCAAC s ponAbe2.chr19 56802853 166 + 60714840 tcgaaagaactccagggtctgggcagcgccagtctgaccaatcaagcagaatctctgggcgttcgtgctttgaaatgaggctccagataggtaagtttaacaggcagccaagattgagaaccacAGGTGGAGATGGGGAAGCTCAGGTGAGGAATCGCCGCCCACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319315 166 - 106955855 tctaaagaactccagggtctgggccgccccagtctgaccaatcaagcagaatctctgggcgtttgtgctttgaaatgaggctccagataggtaagtttaacaggcagctaagactgagaaccacAGGTGGAGATCGGGAAGGTCAGGTGAGGAATCGCCCCCCCAC i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 60618078 158 + 64156825 tttaaagaactccagggtctgggcagccgcagtttaactcatcaaccagcatctctgggcgttcgtgctttgaaatgaggccccagatgggtaagtttaacaggcagcctagattgagaaccacAGGTGCAGAACCGGAAGCTCAGGTCAGGCATTGA-------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55758819 158 + 59248254 tttaaagaactccagggtctgggcagccgcagtttaactcatcaaccagcatctctgggcgttcgtgctttgaaacgaggccccagatgggtaagtttaacaggcagcctagattgagaaccacAGGTGCAGAACCGGAAGCTCAGGTCAGGCATTGA-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863818 158 + 51301725 TTTAAAGAACTCCAGGGTCTGGGCAGCTGCAGTTTAACTCATCAACCAGCATCTCTGGGCGTTCGTGCTTTGAAATGAGGCCCCAGATGGGTAAGTTTAACAGGCAGCCTAGATTGGGAACCACAGGTGCAGATCCGGAAGCTCAGGTCAGGCATTGA-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572524 158 + 50890351 tttaaagaactccagggtctgggcagccgcagtttaactcatcaaccggcatctctgggcgttcgtgctttgaaatgaggccccagatgggtgagtttaacaggcagcctagattgggaaccacAGGTGCAGATCCGGAAGCTCAGGTCAGGCATTGA-------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45925301 158 + 49145316 I e panTro4.chr19 59881226 0 + 63644993 C a score=17672.000000 s hg38.chr19_GL949747v2_alt 611497 18 + 729520 ACCCCCCGCCCCCAAAAG s ponAbe2.chr19 56803019 18 + 60714840 ACCCCCCGCCCCCAAATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319482 18 - 106955855 ACTCCCCGTCCCCAAACG i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 60618236 13 + 64156825 --CCCCCGCCCCC---CG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55758977 13 + 59248254 --CCCCCGCCCCC---CG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863976 14 + 51301725 -ccccccgccccc---cG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572682 13 + 50890351 --CCCCCGCCCCC---CG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45925301 158 + 49145316 I e panTro4.chr19 59881226 0 + 63644993 C a score=442370.000000 s hg38.chr19_GL949747v2_alt 611515 219 + 729520 ACCTCTCAGTAATTCCGGTGGATACAGGAAGTGCTCAGCAACGATTACGCCCCGAGGGCCAATCACAGGGCTGCGGCCGAGAGAGAAGCC---TTATTAGAGCTTTCTCAACCTGCAGCCCTCATCTCCGCCGGCGAGTAGGGCCAGGTGTTGGGAGGTGAGTAGCTCTCCGGCAGCTCTGCAACTTCATTTCTTTATTTCTCCATTCCACAGT---------------TGGTAAAA s ponAbe2.chr19 56803037 219 + 60714840 ACCTCTCAGTAGTTCCGGTGGATACAGGAAGTGCTCAGCAAGGATTACGCCCCGAGGGCCAATCACAGGGCTGCGGCCGAAAGAGAAGCC---TTATTAGAGCTTTCTCCACCTACAGCCCCCATCGCCGCCGGAGAGTAGGGCCAGGTGTTGGGTGGTGAGTAGCTCTCCGGCAAGTCTGCAACTGCATTTGTTTATTTCTCCATTCCATAGT---------------TGGTAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319500 219 - 106955855 ACCCCCCAGTAATTCCGGTGGATACAGGAAGTGCTCAGCAGCGATTACGCCCCGTGGGCCAATCACAGGGCTGCGGCCGAACGAGAAGCC---TTATTAGAGCTTTCTCAACCTACAGCCCTCACCGCCGCCGGAGAGTAGGGCCAGGTGCTGGGAGGTGAGTGGCTCTCCGGCAACTCTGCAACTTCCTTTCTTTATTTCTCCATTCCACAGT---------------TGGTAAAA i nomLeu3.chr10 C 0 I 524 s rheMac3.chr19 60618249 220 + 64156825 ACCTTTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGGTTTACGCCCCGAGGGCCAATCACAGGGCTGCGGCCGA--GAGGAGCCTTTTTATTAGCGCTTTCTCAGCCTCCATCCCTCAGTGCCGCCGGGGAGTGGTGCCAGGTGTTACGAGGTGAGTATCTCTCCGGCAACTCTGCAACTTCATTTCTTTCTTTCTCCATTCCACAGT---------------TGGTAAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55758990 220 + 59248254 ACCTTTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGGTTTACGCCCCGAGGGCCAATCACAGGGCTGCGGCCGA--GAGGAGCCTTTTTATTAGCGCTTTCTCAGCCTCCATCCCTCAGTGCCGCCGGGGAGTGGTGCCAGGTGTTACGAGGTGAGTATCTCTCCGGCAACTCTGCAACTTCATTTCTTTCTTTCTCCATTCCACAGT---------------TCGTAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863990 220 + 51301725 ACCTCTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGGATTACGCCCCGAGGGCCAATCACAGGGCTGCGGCCGA--GAGAAGCCTTTTTATTAGAACTTTCTCGGCCTACATCCCTCAGTGCCGCCGGGGAGTGGTGCCAGGTGTTAGGAGGTGAGTAGCTCTCCGGCAGCTCTGcaacttcatttctttatttctcccttccaCAGT---------------tggtaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572695 220 + 50890351 ACCTTTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGAATTACGCCCCGAGGGCCAATCACAGGGCTGCGGCCGA--GAGAAGCCTTTTTATTAGAACTTTCTCGGCCTACGTCGCTCAGTGCCGCCGGGGAGTGGGGCCAGGTGTTAGGAGGTGAGTAGCTCTCCGGCAGCTCTGCAATTTCATTTCTTTATTTCTGCATTCCACAGT---------------TGGTAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925459 232 + 49145316 GCCTCCCAGGATTCCTGGTGGGTACAGGAAGTGCCCAGCAATGGTCAGGCCCTGAGGACCAATCACAGG--TGGGGCAGAAAGAGAAACCTTTTTATTAGCGCCTTCTCAGCCTCCGGCACTCAG---AGCCGGGGAGTAGGGCCAGGCCTTGGGAGGTGAGTAGCTGCTGGGCAACCCTGCGGCTTCATTTCTGTGTTTCTCCATTCCACAGTTAGTTGTTGTCTCTATGGTAAAA i calJac3.chr22 I 158 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e panTro4.chr19 59881226 0 + 63644993 C a score=6044.000000 s hg38.chr19_GL949747v2_alt 611734 8 + 729520 Tttctcct s ponAbe2.chr19 56803256 8 + 60714840 TTTCTCCt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320243 8 - 106955855 tttttttt i nomLeu3.chr10 I 524 C 0 s rheMac3.chr19 60618469 8 + 64156825 TGTCTCCT i rheMac3.chr19 C 0 I 1812 s macFas5.chr19 55759210 8 + 59248254 TGTCTCCt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864210 6 + 51301725 tttcct-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572915 8 + 50890351 tttctcct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925691 7 + 49145316 ttcctcc- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e panTro4.chr19 59881226 0 + 63644993 C a score=191197.000000 s hg38.chr19_GL949747v2_alt 611742 153 + 729520 tttatttcatatatttttttt---ct-gagacggagtctcgctctgtcgcccaggctggagtgcggtggcgcgatctcggctcactgcaagctc---cgcctcccgggttcaggccattctcctgcctcagcctcccgagtagctgagactacaggcacc s ponAbe2.chr19 56803264 154 + 60714840 tttatttcatatatttttttt---tttgggacgaagtctcgctctgtcgcccaggctggagtgaggtggcgcgatctcggctcactgcaagctc---cgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcgcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320251 150 - 106955855 tttttttc---tttttttttt---tt-gaaacgaagtctggctctgtcgctcaggctggagtgcaatggtgcaatcttggcccactgcaagctc---cgcctcctgggttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggcgcc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759218 151 + 59248254 ----ctttttttttttttttt-aatt-gagacagagtcttgctgtgtcgcccaggctggggtgtagtggggagatctcggctcactgcaaactc---cgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcgcc i macFas5.chr19 C 0 I 28 s papAnu2.chr19 47864216 141 + 51301725 -----------tttttttttt---tt-gagacggagtctcactctgtcgcccaggctggagtgcagtggcctgatctcagctcac-gcaagctc---cacctcctgggtttacgccattctcctgcctcagcctcccgagtacctgggactacaggcgcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572923 154 + 50890351 --tttttttttttttttttttaaatt-gagacagagtctcgctgtgtcgcccaggctggagtgcagtggggagatttcagctcactgcaagctc---cgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcgcc i chlSab2.chr6 C 0 I 28 s calJac3.chr22 45925698 131 + 49145316 ----------------ttttt---tt-gagac--agtctcactttgtcacccgggctagagtgcagtggtgcaatcaca------ttcaagcttgaacacctcccaggttcaagggagtttcatgcctcagcctcctgagtagctg-gactataggcatg i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 1812 + 64156825 I e panTro4.chr19 59881226 0 + 63644993 C a score=4140.000000 s hg38.chr19_GL949747v2_alt 611895 20 + 729520 tgccactatgcccagctaat------------------------------ s ponAbe2.chr19 56803418 20 + 60714840 cgccaccacgcccagctaat------------------------------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320401 20 - 106955855 catcaccacgctcggctaat------------------------------ i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47864357 19 + 51301725 cgccacttcgcccggctaa------------------------------- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45925829 50 + 49145316 agccaccacacatggccaaCATTGAATAGCTTTTCTTTCtttcttttctt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e chlSab2.chr6 47573077 28 + 50890351 I e macFas5.chr19 55759369 28 + 59248254 I e rheMac3.chr19 60618477 1812 + 64156825 I e panTro4.chr19 59881226 0 + 63644993 C a score=5570.000000 s hg38.chr19_GL949747v2_alt 611915 9 + 729520 -ttttttgta s panTro4.chr19 59881226 9 + 63644993 -ttttttgta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803438 9 + 60714840 -ttttttgta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320421 8 - 106955855 --tttttgta i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47864376 9 + 51301725 -gtttttgta i papAnu2.chr19 C 0 I 1 s calJac3.chr22 45925879 9 + 49145316 ttttttttt- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e chlSab2.chr6 47573077 28 + 50890351 I e macFas5.chr19 55759369 28 + 59248254 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=204850.000000 s hg38.chr19_GL949747v2_alt 611924 120 + 729520 tttttagtagagacggggtttcac-catgttggccaggctgg-------------------------------tctcagt----------------------ccgcctcggcctcccaaggtgccgggattacaggcgtgagccaccgcgcccagccttttttttttttttttt s panTro4.chr19 59881235 129 + 63644993 tttttattagagacggggtttcac-catgttggccaggctgg-------------------------------tctcagtctcctgacctc--gtgatccgcccgcctcggcctcccaaggtgccgggattacaggcgtgagccaccgcgcccagcc-----------tttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803447 129 + 60714840 tttttagtagagacagggtttcac-catgttggccaggctgg-------------------------------tctcagtcttctgacctt--gtgatccgcccgcctcggcctcccaaggtgccgggattacaggcgtgagccaccgcgcccagcc-----------tttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320429 115 - 106955855 tttttagtaaagacggggtttcac-catgttggccaggatgg-------------------------------tctcagtctcctgacctt--gtgatccgcccgcctcggcctctcaaagtgtcgggattacagg-----------------GGCC--------ttttttttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759397 139 + 59248254 tttttggtagagactgggtttcac-cgtgttagccaggatag-------------------------------tctcgatctcctgacctt--gtgagccacccgcctcgacctcccaaagtgctgggatttcaggcgtgagccaccgcgcccggtc-ttcttttttttttttt i macFas5.chr19 I 28 C 0 s papAnu2.chr19 47864386 139 + 51301725 tttttagtagagacggggtttcac-cgtgtcagccaggatgg-------------------------------tctcgatctcctgacctc--gtgatccgcccgtctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggcc-tttttttttttttttt i papAnu2.chr19 I 1 I 12 s chlSab2.chr6 47573105 139 + 50890351 tttttagtagagactgggtttcac-cgcgttagccaggatgg-------------------------------tctcgatctcctgacctt--gtgagccgcccgcctcgacctcccaaagtgctgggatttcaggcgtgagccaccgcgcccggtc-CTttttttttttcttt i chlSab2.chr6 I 28 I 1 s calJac3.chr22 45925888 170 + 49145316 tttttttttgagtcggagttttgctcttgttacccaggctggagtgcaatggcgcgatctcggctcaccgcaacctccgcctcctgggttcaggcaattctcctgcctcagcctcctgagtagctgggactacaggcacgcgccaccatgcccagct-aatttttgtattt--- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=5618.000000 s hg38.chr19_GL949747v2_alt 612044 9 + 729520 ttttttttt s panTro4.chr19 59881364 9 + 63644993 ttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803576 8 + 60714840 tttttttt- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320544 9 - 106955855 ttttttttt i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47573245 9 + 50890351 tttcttttt i chlSab2.chr6 I 1 I 240 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926058 0 + 49145316 C e papAnu2.chr19 47864525 12 + 51301725 I e macFas5.chr19 55759536 0 + 59248254 C e rheMac3.chr19 60618477 1812 + 64156825 I a score=134.000000 s hg38.chr19_GL949747v2_alt 612053 4 + 729520 cttc s panTro4.chr19 59881373 4 + 63644993 cccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103320553 4 - 106955855 tttt i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e ponAbe2.chr19 56803584 0 + 60714840 C e calJac3.chr22 45926058 0 + 49145316 C e chlSab2.chr6 47573254 240 + 50890351 I e papAnu2.chr19 47864525 12 + 51301725 I e macFas5.chr19 55759536 0 + 59248254 C e rheMac3.chr19 60618477 1812 + 64156825 I a score=10590.000000 s hg38.chr19_GL949747v2_alt 612057 9 + 729520 tcttttttg s panTro4.chr19 59881377 9 + 63644993 tcttttttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803584 9 + 60714840 tcttttttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320557 9 - 106955855 ccttttttg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759536 7 + 59248254 --ttttttg i macFas5.chr19 C 0 I 4 s chlSab2.chr6 47573494 9 + 50890351 tcttttttg i chlSab2.chr6 I 240 C 0 s calJac3.chr22 45926058 7 + 49145316 --ttagtag i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e papAnu2.chr19 47864525 12 + 51301725 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=210405.000000 s hg38.chr19_GL949747v2_alt 612066 144 + 729520 ----agggtcttactctgtttcccaggctggagcgctgtggcaggatctcggctcactgaacccttgacctctcaggttcaagcagtcctcacgcctcagcctttgaagtagctgggaccgtgggagggtgccaccacatctgttctg s panTro4.chr19 59881386 144 + 63644993 ----agggtcttactctgtttcccaggctggagcgctgtggcaggatctcggctcactgaacccttgacctctcaggctcaagcaatcctcacacctcagcctctgaagtagctgggaccgtgggagggtgccaccacatctgttctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803593 144 + 60714840 ----agggtcttactctgtttcccaggctggagcgcagtggcaggatctcggctcactgaagccttgacctctcaggctcaagcaatcctcacacttcagcctctgaagtagctgggaccgtgggagggtgccaccacatctgttctg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320566 144 - 106955855 ----agggtcttactctgtttctcaggctggagcgctgtggcaggatctccgctcactgaagccttgacctctcaggctcaagcaatcctcacacctcagcctctgaagtagctgggaccgtgggagggtgccaccacatctgttctg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759547 139 + 59248254 ----ggagtctcgctctgtcacccaggctggagtgcagtggccggatctcagctcactgcaagctccgcctcccgggtttacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccacctcgcc-----cg i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47864537 138 + 51301725 ----agagtctcgctgtgtcgcccaggctggggtgcagtggggagatctcagctcactgcaaactccgcctcccgggttcccgccattctcctgccccagcctcccgagtagctgggactacaggcg-ccgccaccacgcc-----cg i papAnu2.chr19 I 12 C 0 s chlSab2.chr6 47573503 144 + 50890351 ----agggtcttactctgtttcccaggctggagcattgtggcaggatctcagctcaccggagccttgacctcttgggcgcaagcaatcctcgcacctgagcctctgaagtagctgggaccgtgggagggtgccaccacatctctcatg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45926065 115 + 49145316 agacggggtttcaccttgttgaccaggatgg-------------------------------tctcgatctcttgacctcatg--atccacccgccttggcctcccaaagtgctgggattataggcgtgagccaccgcgcccggccTG i calJac3.chr22 C 0 I 482 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=33797.000000 s hg38.chr19_GL949747v2_alt 612210 46 + 729520 gctaataatattat--tattaccactgtttgcagagactcactagatg s panTro4.chr19 59881530 46 + 63644993 gctaataatattat--tattaccactgtttgtagagactcactagatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803737 46 + 60714840 gctaataataatat--tattaccactgtttgtagagactcactagatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320710 46 - 106955855 gctaataataatat--tattaccactgtttgtagagactcactagatg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759686 29 + 59248254 gctagt-------t--ttttgtattttttagtagagac---------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864675 29 + 51301725 gctaat-------t--ttttgcattttttggtagagac---------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47573647 41 + 50890351 gctaaa-------taatattatcactctttgtagggactcactagatg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926180 482 + 49145316 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=211798.000000 s hg38.chr19_GL949747v2_alt 612256 130 + 729520 tagggtcttaatatgttgccgaagctggtctctaactcctgggctcaagcgatcttcctgcctcagactcccaaaat-tctgggattataggcaggtgccaccgcgcccggccTAAATCTTTTCTTCTGTT s panTro4.chr19 59881576 125 + 63644993 tagggtcttagtatgttgccgaagctggtctctaactcctgggctcaagcgatcttcctgcctcagactcccaaagt-tctgggattacaggcaggtgccaccgcgcccggccTAAA-----TCTTCTGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803783 130 + 60714840 tagggtcttagtatgttgccgaagctggtctctaactcctgggctcaagcgatcttcatgcctcagactcccaaagt-tctgggattacaggcaggagccaccgcgcctggccTAAATCTTTTCTTCTGTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320756 130 - 106955855 tagggtcttagtatgttgcggaagctggtctctaactcctgggctcaagcgatcttcctgcctcagactcccaaact-cctgggattacaggcaggagccactgcgcccggccTAAATCTTTTCTTCTGTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759715 127 + 59248254 -ggggtttcaccgtgttaaccaggatggtctggatctcccgacctc--gtgatccgcccgtctcggcctcccaaagt-gctgggattacaggcttgagccaccgcgcccggcctttttttttttttttctt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864704 127 + 51301725 -ggggtttcaccgtgttagccaggatggtctccatctcctgacctt--gtgagcctcccgcctcgacctcccaaagt-gctgggatttcaggcgtgagccaccgcgcccggtctttttttttttttttttt i papAnu2.chr19 C 0 I 1181 s chlSab2.chr6 47573688 131 + 50890351 tagggtgttagtatgttgcccaagctggtctctaactcccgggctccagagatcttactgcctcagactcccaaaatggctagaattacaggcaagagccaccgttcccggccTAAATCTTGTCTTCTGTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45926662 130 + 49145316 tggggtttctccatgttggtcaggctggtctcgaactcctgacctcagatgatccgcctgcctcagcctcccaaagt-gctggaattacagggaggagccgcctcgcccagGCTAAACCTTTTCATCTGTT i calJac3.chr22 I 482 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=3279.000000 s hg38.chr19_GL949747v2_alt 612386 2 + 729520 AG s panTro4.chr19 59881701 2 + 63644993 AG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803913 2 + 60714840 AG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320886 2 - 106955855 AG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759842 2 + 59248254 gg i macFas5.chr19 C 0 I 1169 s chlSab2.chr6 47573819 2 + 50890351 AG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45926792 2 + 49145316 AG i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e papAnu2.chr19 47864831 1181 + 51301725 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=48227.000000 s hg38.chr19_GL949747v2_alt 612388 54 + 729520 AAATTAAGTGGTTCTGCCTGTCTcagtgg--ctcacgcctgtaatcgcagcgcttt s panTro4.chr19 59881703 56 + 63644993 AAATTCAGTGGTTCTGCCTGTCTCAGTGGCTctcacgcctgtaatcgcagcgcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803915 53 + 60714840 AAACTCAGTGG-TCTGCCTGTCTcagtga--ctcacgcctgtaatcgcagcgcttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320888 54 - 106955855 AAATACAGTGGTTCTGCCTGTCTCCgtgg--ctcacgcctgtaatcgcagcgcttt i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47573821 54 + 50890351 AAGTTCAGTGGTTCTgccggtctcggtgg--ctcacacctgtaataccagcgctgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45926794 50 + 49145316 AAATTCAGTGGTTTGGGCAA----GGTGG--CTCATGTCTGTCATCCTAGCACCtt i calJac3.chr22 C 0 I 3424 e canFam3.chr1 20036246 5018 - 122678785 I e papAnu2.chr19 47864831 1181 + 51301725 I e macFas5.chr19 55759844 1169 + 59248254 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=96956.000000 s hg38.chr19_GL949747v2_alt 612442 130 + 729520 gggaggccgaggcgggaggatcacctgaggtcgggagttcgagaccagcctgaccaacatgtagaaaccccatctctactaaaaatataaaattaggtgggcgtggtagcgcatacttgtaatcctagct s panTro4.chr19 59881759 130 + 63644993 gggaggccgaggcgggcggatcacctgaggtcgggagttcgagaccagcctgaccaacatgtagaaaccccatctctactaaaaatatacaattaggtgggcgtgggagcgcatgcttgtaatcccagct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803968 130 + 60714840 gggaggccgaggcgggcggatcacctgaggtcgggagttcgagaccagcctgatcaacatgtagaaaccccatctctcctaaaaatgtaaaattaggtgggcgtggtagcgcatgcctgtaatcccagct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320942 130 - 106955855 gggaggccgaggtgggcggatcactggaggtcgggagttcgagaccagcctgaccaacttgtagaaaccccatctctactaaaaatataaaattaggtgggcgtggtggctcatgcctgtaatcccagct i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47573875 113 + 50890351 gggagggcaaggcgggcagatcacctgaggtga-----------------tgaccaacatgtagaaaccccgtctccactaaaagtataaaatgaggtgggcatggtggagcatgcctgtaatcccagct i chlSab2.chr6 C 0 I 464 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I e papAnu2.chr19 47864831 1181 + 51301725 I e macFas5.chr19 55759844 1169 + 59248254 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=3559.000000 s hg38.chr19_GL949747v2_alt 612572 7 + 729520 actcagg s panTro4.chr19 59881889 7 + 63644993 actcggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804098 7 + 60714840 actcggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321072 7 - 106955855 actcagg i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I e chlSab2.chr6 47573988 464 + 50890351 I e papAnu2.chr19 47864831 1181 + 51301725 I e macFas5.chr19 55759844 1169 + 59248254 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=6111.000000 s hg38.chr19_GL949747v2_alt 612579 3 + 729520 agg s panTro4.chr19 59881896 3 + 63644993 agg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804105 3 + 60714840 agg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321079 3 - 106955855 agg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55761013 3 + 59248254 agg i macFas5.chr19 I 1169 C 0 s papAnu2.chr19 47866012 3 + 51301725 agg i papAnu2.chr19 I 1181 C 0 s chlSab2.chr6 47574452 3 + 50890351 agg i chlSab2.chr6 I 464 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=358358.000000 s hg38.chr19_GL949747v2_alt 612582 175 + 729520 ctgaggcaggagaatcacttgaacccgggaagcggaggttgcggggagcctagatcataccattgctctccagcctgcgcagcaagagagaaactgtctc----aaaaaataaaataaaataaaaTTCAGTGGTTCTGACTGGGGAAAGAGTAGCAGATGCTTAGATCTAGAGAGACTC s panTro4.chr19 59881899 170 + 63644993 ctgaggcaggagaatcacttgaacccgggaggcggaggttgcggggagcctagatcataccattgctctccagcctgcgcagcaagagagaaactgtctc----aa-----aaaataaaataaaaTTCAGTGGTTCTGATTGGGGAAAGAGTAGCAGATGCTTAGATCTAGAGAGACTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804108 170 + 60714840 ctgaggcaggagaatcacttgaacccgggaggcggaggttgtggggagccgagatcataccattgctctccagcctgcacagcaagagagaaactgtctc----aa-----aaaataaaataaaaTTCAGTGGTTCTGACTTGGGAAAGAGTAGCAGATGCTTAGATCTAGAGAGACTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321082 165 - 106955855 ctgaggcgggagaattgtttgaacctgggaggcggaggtttcggggagccgggatcataccattgctctccagcctgcacagcaagaaagaaaccgtctc----aa----------aaaataaaGTCCAGTAGTTCTGAATTGGGAAAGAGTAGCAGATGCTTAGATCTAGAGAGACTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60620289 168 + 64156825 ctgaggcaggagaatcccttgaacccaggaggcggaggttggggggatccgagttcgtgccactgcactccagcctgggcagcaagagagaaactctctc-----------aaaaaaaaaaaaaaTGCAGTGGTTCTGACTTGGGAAAGAGTAGCAGATGCTTAGATCTAGAGTGTCTC i rheMac3.chr19 I 1812 C 0 s macFas5.chr19 55761016 174 + 59248254 ctgaggcaggagaatcccttgaacccgggaggcggaggttgcggggatccgaggtcgtgccactgcactccagcctgggcagcaagagagaaactctctcaaaaaa-----aaaaaaaaaaaaaaTGCAGTGGTTCTGACTTGGGAAAGAGTAGCAGATGCTTAGATCTAGAGTGTCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866015 173 + 51301725 ctgaggcaggagaatcccttgaacccgggaggtggaggttgtggggatccgaggtcatgccactgcactccagcctgggcagcaagagagaaactgtcta-acaaa-----aaaaaaaaaaaaaattcagtggttCTGACTTGGGAAGGAGTAGCAGATGCTTAGATCTAGAGTGTCTC i papAnu2.chr19 C 0 M 256 s chlSab2.chr6 47574455 166 + 50890351 ctgaggcaggagaatcccttgaacccgggaggcggaggttgcggggatccgaggtcgtgccactgcactccagcctgggcagcaagcgagaaactgtctc-------------aaaaaaaaaaaaTTCAGCGGTTCTGACTTGGGAAAGAGTAGCAGATGCTTAGATCTAGAGTGTCTC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I a score=229315.000000 s hg38.chr19_GL949747v2_alt 612757 168 + 729520 TAGTTAAGGTTGGCTCATAAGAGGATAGTTGTGTGTGCTTTTATTTCTGTTCTCTTGGGGGATTTAGGATAGAGCTATAGAGAGCTCC---AAAAAAAAAAATATATTGGAACAGGTCAGATGCTGTGGTTGCTGTGTGTGGAGTCCTGGGCAGTGCTAAGGTTTTGTGTC s panTro4.chr19 59882069 168 + 63644993 TAGTTAAGGTTGGCTCATAAGAGGATAGTTTTGTGTGCTTTTATTTCTGTTCTCTT---GGATTTAGGATAGAGCTATAGAGAGCTCCAAAAAAAAAAAAAAAATGTTGGAACAGGTCAGATGCTGTGGTTGCTGTGTGAGGAGTCCTGGGCAGTGCTAAGGTTTTCTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804278 161 + 60714840 T-----ACGTTGGCTCACAAGAGGATAGTTTTGTGTGC-TTTATTTCTGTTCTCTTGGGGGATTTAGGATAGAGCTATAGAGAGCTCC----AAAAAAAAAATATGTTGGAACAGGTCAGATGCTGAGGTTGCTGTGTGTGGAGTCCTGGGCGGTGCTAAGGTTTTGTGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321247 166 - 106955855 TAGTTTATGTTGGCTCATAAGAGGATAGGTTTGTGTGCTTTTATTTCTGTTCTCTTGGGGGATTTAAGATAGAGCTATAGAGAGCTCC-----AAAAAAAAATACATTGTAACAGGTCAGATGCTGTGATTGCTGTATGTGTAGTCCTGAGCAGTGCCCACGTTTTGCATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60620457 151 + 64156825 TAGTTTACATTGGTTCATAAGAGGATAAGTTTGTGTGCTTTTATTTCTGTTCTCTTGGGGGATTTAGAATAGAGCT-----------C----AAAAAACAAAAA---TGGAACAGGTCAGATGCTGTGGTTGCTGTGTGTGGAGTCCTGGGCGGTGCTGAGG--TTGTGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55761190 151 + 59248254 TAGTTTACATTGGTTCATAAGAGGATAAGTTTGTGTGCTTTTATTTCTGTTCTCTTGGGGGATTTAGAATAGAGCT-----------C----AAAAAACAAAAA---TGGAACAGGTCAGATGCTGTGGTTGCTGTGTGTGGAGTCCTGGGCGGTGCTGAGG--TTGTGTC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47574621 153 + 50890351 TAGTTTACATTGGTTCATAAGAGGATAAGTTTGTGTGCTTTTATTTCTGTTCTCTTGGGGGATTTAGAATAGAGCT-----------C--AAAAAAAAAAAAAA---TGGAACAGGTCAGATGCTGTGGTTGCTGTGTGTGGAGTCCTGGGCGGTGCTGAGG--TTGTGTC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I e papAnu2.chr19 47866188 256 + 51301725 M a score=399977.000000 s hg38.chr19_GL949747v2_alt 612925 192 + 729520 TAATGAGTCCTCTTAACAAGAAGGTATTGTTTTT-TAT--TCACTGAGGTGAGGGAGCCTCTTAG-CATCATTCTAGTCCAGCTTCCGGACCTGAGTCTTATGCAAATACCTATGCCAGTTGCCATTCTCACGCTATTCACAGCTATCATATAAAGAGGTGTTATACCCTTTCTGTAAAGTTTTTGTTGCTACTG--C s panTro4.chr19 59882237 191 + 63644993 TAATGAGTCCTCTTAA-AAGAAGGTATTGTTTTT-TAT--TCACTGAGGTGAGGGAGACTCTTAC-CATCATTCTAGTCCAGCTTCCGGACCTGAGTCTTATGCAAATACCTATGCCAGTTGCCATTCTCACGCTATTCACAGCTATCATATAGAGAGGTGTTATACCCTTTCTGTAAAGTTTTTGTTGCTACTG--C i panTro4.chr19 C 0 I 325 s ponAbe2.chr19 56804439 191 + 60714840 TAATGAGTCCTCTTAA-CAGAAGGTATTGTCTTT-TAT--TCACTGGGGCGACAGAGCCTCTTAG-CAGCGTTCTAGTCCAGCTTCCGGACCTGAGTCTTATGCAAATACCTATGCCAGTTGCCATTCTCACGCTATTCACAGCTATCATATAGAGAGGTGTTACACCCTTTCTGTAAAGTTTTTGTTGCTACTG--C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321413 193 - 106955855 TAATGAGTCCTCTTAA-CAGAAGGTATTGTCTTT-TATAAACATTGAGGTGACGAAGCCTCTTAG-CATTGTTTTAGTCCAGCTTCCAGACCTGAGTCTTATGCAAATACCTATGCCAGTTGCCATTCTCAAGTTATTCACAGCTATCATCTAGAGAGGTGTTATACCCTTTCTGTAAAGTTTTTGTTGCTGCTA--t i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 60620608 184 + 64156825 TAATGAGTCCTCTTAA-CAGAAGGTATTGTCTTT-TAT--TCATTGAGGTGGTGGAGCCTCTTAT-CCTCATTCTATTCCAGCTTCTGGACCTGAGTCTTATGCAAATACCTATGCTAGTTGTCATTCTCACGTTATTCA-------CATATAGAGAGGTGTTACACCCTTTCTGTAAAGTTTTTGTTGCTACTG--C i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55761341 184 + 59248254 TAATGAGTCCTCTTAA-CAGAAGGTATTGTCTTT-TAT--TCATTGAGGTGGTGGAGCCTCTTAT-CCTCATTCTATTCCAGCTTCTGGACCTGAGTCTTATGCAAATACCTATGCTAGTTGTCATTCTCACGTTATTCA-------CATATAGAGAGGTGTTACACCCTTTCTGTAAAGTTTTTGTTGCTACTA--C i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866444 192 + 51301725 TAATGAGTCCTCTTAA-CAGAAGGTATTGTCTTTCTAT--TCATTGAGGTGGTGGAGCCTCTTATACCTCATTCTATTCCAGCTTCTGGACCTGAGTCTTATGCAAATACCTATGCTAGTTGTCATTCTCACGTTATTCACAGCTAGCATATAGAGAGGTGTTACACCCTGTCTGTAAAG-TTTTGTTGCTactg--c i papAnu2.chr19 M 256 C 0 s chlSab2.chr6 47574774 185 + 50890351 TAATGAGTCCTCTTAA-GAGAAGGTATTGTCTTT-TAT--TCATTGAGGTGGTGGAGCCTCTTAT-CCTCATTCTATTCCAGCTTCTGGACCTGAGTCTTATGCAAATACCTATGCTAGTTGTCATTCTCA-GCAGCTAG-------CATATAGAGAAGTGTTACACCCTTTCTGTAAAGTTTTTGTTGCTACTGGTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I a score=696.000000 s hg38.chr19_GL949747v2_alt 613117 2 + 729520 TA s ponAbe2.chr19 56804630 2 + 60714840 TA i ponAbe2.chr19 C 0 I 4 s nomLeu3.chr10 103321607 1 - 106955855 t- i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 60620792 2 + 64156825 TA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55761525 2 + 59248254 TA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866636 2 + 51301725 ta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47574959 2 + 50890351 TA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I e panTro4.chr19 59882428 325 + 63644993 I a score=2680.000000 s hg38.chr19_GL949747v2_alt 613119 1 + 729520 --t s panTro4.chr19 59882753 1 + 63644993 --t i panTro4.chr19 I 325 C 0 s ponAbe2.chr19 56804636 1 + 60714840 --t i ponAbe2.chr19 I 4 C 0 s nomLeu3.chr10 103321608 1 - 106955855 --t i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60620794 3 + 64156825 TAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55761527 3 + 59248254 TAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866638 3 + 51301725 tat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47574961 3 + 50890351 TAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I a score=173328.000000 s hg38.chr19_GL949747v2_alt 613120 73 + 729520 tttttttttt------ttttttttgagacaaagtctagctctgtttcccaggctggagtacagtggcgctatctcagct s panTro4.chr19 59882754 73 + 63644993 tttttttttt------ttttttttgagacaaagtctagctctgtttcccaggctggagtacagtggcgctatctcagct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804637 73 + 60714840 tttttttttt------ttttttttgagacaaagtctagctctgtttcccaggctggagtacaatggcgctatctcagct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321609 73 - 106955855 tttttttttt------ttttttttgagacaaagtctagctctgttgcccaggctggagtacaatggtgctatctcagct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60620797 71 + 64156825 ATATATAAtt------ttgttgttgagacaaag--tagctctgtttcccaggctggagcgcaatggcactacctcagct i rheMac3.chr19 C 0 I 438 s macFas5.chr19 55761530 71 + 59248254 ATATATAAtt------ttgttgttgagacaaag--tagctctgtttcccaggctggagcgcaatggcgctacctcagct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866641 77 + 51301725 atatataattttgttgttgttgttgagacaaag--tagctctgtttcccaggctggagtgcaatggcgctacctcagct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47574964 74 + 50890351 ATATATAAtt---ttgttgttgttgagacaaag--tagctctgtttcccaggctggagtgcaatggcgctacctcagct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45930268 73 + 49145316 tttttttttt------tttgttttgagacagcgttttgctctgttgcccaggctggagtgcagtggcacagtctcagct i calJac3.chr22 I 3424 C 0 e canFam3.chr1 20036246 5018 - 122678785 I a score=385887.000000 s hg38.chr19_GL949747v2_alt 613193 179 + 729520 cactgcaacttccacctcccaggttcaagcaattctcgtgcctcagccttctaagtagctgggactacagccgcctgtcacca-acctggctaattttcgtatttttagtcgatatagggtttcactatgttggccaggctggtctcaagctccagacctcaggtgatcctcccaccttg s panTro4.chr19 59882827 179 + 63644993 cactgcaacttccacctcccaggttcaagcaattctcgtgcctcagccttctaagtagctgggactacagccgcctgtcacca-acctggctaattttcgtatttttagtcgatatagggtttcactatgttggccaggctggtctcaagctccagacctcaggtgatcctcccaccttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804710 174 + 60714840 gactgcaacctccacttcccaggttcaagcaattct-----ctcagcctcctaagtagctgggacgacagccgcctgtcagca-acctggctaattttcgtatttttagtcgatatagggtttcactatgttggccaggctggtctcaagctccagacctcaggtgatcctcccatctcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321682 178 - 106955855 cagtacagcctccacctcccaggttcaagcaattctcgtgcctcagcctcttaagtaggtgagactacagccgcctgtcacc--acgtggctaattttcatatttttagtcgatatggggtttcactacgttggccaggctggtctcaagctccagacctcaggtgatcctcccgcctcg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55761601 174 + 59248254 cactgcaacctccacctcccaggttcaagcaattctcgtacctc------ctaagtagctgggcctacagccgcctgtcaccatgtccagctagttttcgtatttttagtcgatagagggtttcactatgttggccaggctggtctcaagctccagacctcaggtaatcctcccgcttcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866718 180 + 51301725 cactgcaacctccacctcccaggttcaagcaattctcgtacctcagccttctaagtagctgggcctacagccgcctgtcaccatgtccagctagttttcgtatttttagtcaatagagggtttcactatgttggccaggctggtctcaagctccagacctcaggtgatcctcccgcttcg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47575038 180 + 50890351 cactgcaacctccacctcccaggttcaagcaattctcgtacctcagcctcctaagtagctgggcctacagccgcctgtcaccatgtccagctagttttcatatttttagtcgatagagggtttcactatgttggccaggctggtctcaagctccagacctcaggtgatcctcctgcttcg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45930341 180 + 49145316 cactgcaacctccaccccccaggttcaagcaattgtcctgcctcagcctcccaagtagctgggattacaggtgcccgccaccacacgtggctaattttcatatttttagtagggggcgggtttcaccatgttggccaggctagtctcaaactcctgacctcagatgatccttccacctcg i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60620868 438 + 64156825 I a score=59431.000000 s hg38.chr19_GL949747v2_alt 613372 42 + 729520 gactcccaaagtgctgtgattacaggcgtgagccaccgcacc s panTro4.chr19 59883006 42 + 63644993 gactcccaaagtgctgtgattacaggcgtgagccaccgcacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804884 42 + 60714840 gcctcccaaagtgctgcaattacaggcgtgagccaccccacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321860 42 - 106955855 gcctcccaaagtgctgggattacaggtgtgagccatcccacc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47866898 42 + 51301725 gcctccctaagtgctggtattacaggcgtgagccaccccagc i papAnu2.chr19 C 0 I 28 s chlSab2.chr6 47575218 39 + 50890351 gcctccctaagtgctggtattacaggcatgagccaccCc--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45930521 42 + 49145316 gcctcccaaagtgctgggatgataagcgtgagccactatgcc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e macFas5.chr19 55761775 0 + 59248254 C e rheMac3.chr19 60620868 438 + 64156825 I a score=54718.000000 s hg38.chr19_GL949747v2_alt 613414 72 + 729520 cggccCTGttgtt---tttaaaatagagacagggtc---ttaagttgccaggctggtctggaacttctggactggagt s panTro4.chr19 59883048 75 + 63644993 cggccCTGttgttgtttttaaaatagagacagggtc---ttatgttgccaggctggtctggaacttctggactggagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804926 75 + 60714840 cggccCTGTTGTCGTTTTTAAAAtagagacagggtc---ttatgttgccaggctggtctggaacttctggactggagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321902 75 - 106955855 cggccCTGCTGttgtttttaaaatagagacagggtc---ttatgttgccaggcttgtctggaacttctggactggagt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45930563 76 + 49145316 ccgccCTGCTGCTGtttttgaaatagagacagagttttgttacattaacaggctggtctagaacttctgggctgga-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e chlSab2.chr6 47575257 0 + 50890351 C e papAnu2.chr19 47866940 28 + 51301725 I e macFas5.chr19 55761775 0 + 59248254 C e rheMac3.chr19 60620868 438 + 64156825 I a score=3611.000000 s hg38.chr19_GL949747v2_alt 613486 14 + 729520 gat-cacccacctga s panTro4.chr19 59883123 14 + 63644993 gat-cacccacctga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805001 15 + 60714840 gatccacccacctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321977 15 - 106955855 gatccacccacctca i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47866968 14 + 51301725 ggc-caccaccccca i papAnu2.chr19 I 28 C 0 s chlSab2.chr6 47575257 1 + 50890351 --------------a i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45930639 9 + 49145316 ------cccaccaca i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e macFas5.chr19 55761775 0 + 59248254 C e rheMac3.chr19 60620868 438 + 64156825 I a score=549830.000000 s hg38.chr19_GL949747v2_alt 613500 273 + 729520 gcttcccaaagtgcggggattgcaagcgtcagccaccacccccagTGTTGTGTTTT--------TGTTTGTTTTAccaggctggagtgcagtggtgcgatcacagctcactgcagccttaacttccctggctcaggtgatcctcccacctcagcctcctcagtagctgggactacaggtgcatgccactatgcccagcacaatttttttt-ttttttgtattt-ttttgtagagacagggttttgccatgttgcccaggctggtctcaaactc-------caagcaatcc s panTro4.chr19 59883137 267 + 63644993 gcttcccaaagtgcggggattacaagcgtcagccaccacccccagTGTTGTGTTTT--------TGTTTGTTTTAccaggctggagtgcagtggtgcgatcacagctcactgcagccttaacttccctggctcaggtgatcctcccacctcagcctcctcagtagctgggactacaggtgcatgccgctatgcccagcacaatttttttt-------gtattt-ttttgtagagacagggttttgccatgttgcccaggctggtctcaaactc-------caagcaatcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805016 271 + 60714840 gcttcccaaagtgcggggattacaagcgtcagccaccacccccagTGTTGTGTTTT--------TGTTTGTTTTAcctggctggagtgcagtggtgtgaccaaagctcactgcagccttaacttccctggctcaggtgatcctcccacctcagcctcctcagtagctgggactacaggtgcatgccactatgcccagcacatctttttat---ttttttattt-ttttgtagagacagggttttgccatgttgcccaggctggtcttagactc-------caagcaatcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321992 271 - 106955855 gcttcccaaagtgcggggattacaaacatcagccaccacccccagTGTTGTGTT------------TTTGTTTTAccaggctggagtgcagtggtgcgatcacagctcactgcagccttaacttctctagctcaggtgatcctcccacctcagcctcctcagtagctgggaccacaggtgcatgccactatgcccagcacattttttttttttttttgtatttctttcgtagagacagggttttgccatgttgcccaggctggtctcaaactc-------caagcagtcc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55761775 270 + 59248254 gcctccctaagtgcggggattacaagcgtcagccaccacccccagTGTTGTGTT------------TTTGTTTTAccaggctagagtgcagtggtgcgatcacagctcactgcagccttaacttccctagctcaggtgatcctcccacctcagtgtcctgagtagctgggactacaggtgcatgccactatgcccagcgcttttttgtttgtttgtttgcttt-ttttgtggagacagagttttgccatgttggccagtctggtctgaaactc-------caagcaatcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866982 258 + 51301725 gcctcccaaagtgcggggattacaagcctcagccaccacccccagtgttgtgtt------------tctgttttaccaggctggagtgcagtggtgcgatcacagctcactgcagccttaacttccctagctcaggtgatcctcccgcctcagcatcctgagtagctgggactacaggtgcatgccactatgcccagcactttt-------tttgtttg------tttgtagagacagagttttgccatgttggccaggctggtctgaaactc-------taagcgatcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47575258 262 + 50890351 gcttcccaaagtgcggggattacaagcctcagccaccacccccagTGTTGTGTT------------TTTGTTTTAccaggctggagtgcagtggtgcgatcacagctcactgcagccttaacttccctagctcagttgatcctcccacctcagcgtcctgagtagctgggactacaggtgaatgccactatgcccagcacttt--------tttgtttgcttt-ttttgtagagacagagttttgccatgttggccaggctggtctgaaactc-------caagcaatcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45930648 281 + 49145316 gctttccaaagtgctgggatgacaagcgtgagccaccgcacccggTGtttttttttttctgttattttttttttaccaggctggggtgcagtggtgtgattgtggctcactgcagccttaaa-tcctgggctcaggtgatcctcccacttcagcctccttagtagctgggattacaggtgcatgccaccgtgcccagcacatga-------atttttgtattt-tttggtagagagagggttttgccatgctctccaggctggtctcaaactccttggcgcaagcaatcc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60620868 438 + 64156825 I a score=396688.000000 s hg38.chr19_GL949747v2_alt 613773 142 + 729520 tcccaccttggcttcccaaagtgtttggggttccaggtgtgagccatggccccccggccAGCTTCAGTAAAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCACTAAGTTATCTTTAA------GCCtttttttttttt--- s panTro4.chr19 59883404 141 + 63644993 tcccaccttggcttcccaaagtgtt-ggggttccaggtgtgagccatggccccccggccAGCTTCAGTAAAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCGCTAAGTTATCTTTAA------GCCtttttttttttt--- i panTro4.chr19 C 0 I 12 s ponAbe2.chr19 56805287 136 + 60714840 ccccaccttggcttcccaaagtgtt-ggggttccaggtgtgagccatggccccccggccAGCTTCAGTACAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCACTAACTCATCTTCAA------GCCttttttt-------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322263 140 - 106955855 tcccgccttggcttcccaaagtgtt-ggggttccaggcgtgagccatggccccccggccAGCTTCAGTAAAGTAAAAGCCACACACCTGTGTCCTGA-ACCAGGCTCCACCACTAACTCATCTTCAA------GCCtttttttttttt--- i nomLeu3.chr10 C 0 I 23 s rheMac3.chr19 60621306 140 + 64156825 tcccgccttggcttcccaaagtgct-ggggttacaggtgtgagccacgg-cccccagccagcttcagtaAAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCTCTAACTCATCTTCAA------GCCtttttctttttt--- i rheMac3.chr19 I 438 I 1988 s macFas5.chr19 55762045 140 + 59248254 tcccgccttggcttcccaaagtgct-ggggttacaggtgtgagccacgg-cccccagccAGCTTCAGTAAAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCTCTAACTCCTCTTCAA------GCCtttttttttttt--- i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47867240 140 + 51301725 tcccaccttggcttcccaaagtgct-gggattacaggtgtgagccacgg-gcCCCAGCCAGCTTCAGTAAAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCTCTAACTCATcttcaa------gctcttttttttttt--- i papAnu2.chr19 C 0 I 17 s chlSab2.chr6 47575520 140 + 50890351 ttccgccttggcttcccaaagtgct-ggggttacaggtgtgagccatgg-cccccagccAGCTTCAGTAAAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCTCTAACTCATCCTCAA------GCCtttttttttttt--- i chlSab2.chr6 C 0 I 15 s calJac3.chr22 45930929 149 + 49145316 tcccaccttggcttcccaaagtgtt-ggtgttacaagtgtgagccacgg-cacctggtcAGCTTCAGTAAAGTAAAAGCCAGACACCTGTGTCCTGAGACCAGGCTCCACCACTCACTCACCTTCAACTCAATGttttttccttttttttt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I a score=41621.000000 s hg38.chr19_GL949747v2_alt 613915 24 + 729520 --gagacagtttcactcttgtcgccc s panTro4.chr19 59883557 24 + 63644993 --gagacagtttcactcttgtcaccc i panTro4.chr19 I 12 C 0 s ponAbe2.chr19 56805423 24 + 60714840 --gagacagtttcactcttgtcaccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322426 24 - 106955855 --ttgacagtttcactcttgtcgccc i nomLeu3.chr10 I 23 C 0 s macFas5.chr19 55762196 24 + 59248254 --gagacagtttcactcttgttgccc i macFas5.chr19 I 11 C 0 s papAnu2.chr19 47867397 24 + 51301725 --gagacagtttcactcttgttgccc i papAnu2.chr19 I 17 C 0 s chlSab2.chr6 47575675 24 + 50890351 --GAGACAGTTTCACTCTTGTTGCCC i chlSab2.chr6 I 15 I 1446 s calJac3.chr22 45931078 24 + 49145316 tagatggagtctagctctc-tcacc- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60621446 1988 + 64156825 I a score=185907.000000 s hg38.chr19_GL949747v2_alt 613939 124 + 729520 caggctggagtgcagtggcgccatgtcagctcaccacaacctctgcctcccactcccaggttcaagcgattctcctgcctcagcctcccaagtagctggaactacaggcacctgccaccacgcc s panTro4.chr19 59883581 124 + 63644993 caggctggagtgcagtggcgccatgtcagctcaccacaacctctgcctcccactcccaggttcaagcgattctcctgcctcagcctcccaagtagctggaactacaggcacctgccaccacacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805447 124 + 60714840 caggctggagtgcagcggtgccatgtcagctcaccacaacctccgcctcccactctcgggttcaagcgattctcctgcctcagcctcccaagtagctggaactacaggcgcacaccaccacact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322450 124 - 106955855 caggctggagtgcaatggcaccatgttggctcaccacaacctctgcctcccactcccgggttcaagcaattctcccgcctcagcctcccaagtagctggaactatgggtgcccgccaccagacc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55762220 113 + 59248254 caggctggagttcaatg-----------gctcaccacaccctcggcctcccactcccgggttctagcgattctcctgcctcagcctcccaagtagccaggactacaggcatgtgtcaccacgcc i macFas5.chr19 C 0 I 1478 s papAnu2.chr19 47867421 75 + 51301725 caggctggagttcaatg-----------gctcaccaca--------------------------------------gcctcagccccccaagtagccgggactacaggcatgtgtcaccacacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47577145 115 + 50890351 caggctggagtgcagtggcgccatctcagctcactgca------agctctgcctcccgggttcatgccattct---gcctcagcctcccgagtagctgggactacaggtgcccaccaccacgcc i chlSab2.chr6 I 1446 C 0 s calJac3.chr22 45931102 117 + 49145316 caggctggagtgcaatggcacaatctcgtctcactgcaacccctgc------ctcctgagttcaagcgattttcctgcttaaggctctcgagtagctgtgactacaggcacacaccacc-cact i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60621446 1988 + 64156825 I a score=125174.000000 s hg38.chr19_GL949747v2_alt 614063 61 + 729520 cggctaattttt-tgtattttt--agtagagacggggtttcactgtgttagccaggatggtctc s panTro4.chr19 59883705 61 + 63644993 cggctaattttt-tgtattttt--agtagagacggggtttcactgtgttagccaggatggtctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805571 61 + 60714840 cggctaattttt-tgtattttc--agtagagacggggtttcactgtgttagcaaggatggtctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322574 61 - 106955855 cggctaattttt-tgtattttt--agtagagacggggtttcactgtgttagccaggatggtctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55763811 61 + 59248254 cggctaattttt-tgtattttt--agtagagatggggtttcactgttttagccaggatggtctt i macFas5.chr19 I 1478 C 0 s papAnu2.chr19 47867496 60 + 51301725 cgactaa-tttt-tgtactttt--agtagagacggggtttcatcatattggccaggctggtctc i papAnu2.chr19 C 0 I 1592 s chlSab2.chr6 47577260 61 + 50890351 cggctaatgttt-tgtattttt--agtagagacggggtttcactgttttagccagaatggtctt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45931219 64 + 49145316 tggccaccttttgtatattttttaaatagagatggggtttcaccatgttggccaggctggtctt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60621446 1988 + 64156825 I a score=71186.000000 s hg38.chr19_GL949747v2_alt 614124 33 + 729520 gatctcctgacctca--cgatccgcccgcctcggc s panTro4.chr19 59883766 33 + 63644993 gatctcctgacctca--cgatccgcccacctcggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805632 33 + 60714840 gatctcctgacctca--tgatccgcccgcctcggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322635 33 - 106955855 gatctcctgacctcg--tgatccgcccacctcagc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55763872 33 + 59248254 gatctcctgacctca--tgatccacctgcctcagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47869148 33 + 51301725 gatctcctgacctcg--tgatccacctgcctcagc i papAnu2.chr19 I 1592 C 0 s chlSab2.chr6 47577321 33 + 50890351 gatctcctgacctcg--tgatccacctgcctcagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45931283 35 + 49145316 gaactcctgaccccaagtgatctgcctgcttcagc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60621446 1988 + 64156825 I a score=125391.000000 s hg38.chr19_GL949747v2_alt 614157 42 + 729520 ctcccaaagtgctgggattgcaggcgtgagccaccgcgcccg s panTro4.chr19 59883799 42 + 63644993 ctcccaaagtgctgggattgcaggcgtgagccaccgcgcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805665 42 + 60714840 ctcccaaagtgctgggattacaggcgtgagccactgcgccgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322668 42 - 106955855 ctcccaaagtgctgggattacaggcgtgagccactgcgtccg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60623434 42 + 64156825 ctcccaaagtgctgggattacaggcgtgagccaccgtgcctg i rheMac3.chr19 I 1988 C 0 s macFas5.chr19 55763905 41 + 59248254 -tcccaaagtgctgggattacaggcgtgagccaccgtgcctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47869181 41 + 51301725 -tcccaaagtgctgggattacaggcgtgagccaccgtgcctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47577354 41 + 50890351 -tcccaaagtgctgggattataggcgtgagccaccgtgcctg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45931318 42 + 49145316 ctcccaaagcgctgggattacaggtatgagccatctcacctg i calJac3.chr22 C 0 I 1750 e canFam3.chr1 20036246 5018 - 122678785 I a score=129125.000000 s hg38.chr19_GL949747v2_alt 614199 54 + 729520 gcTGTGTGTTTGCATTATCATATTCAGCCCAGTTTTCACGAAGTTTCTTGTCTC s panTro4.chr19 59883841 54 + 63644993 gcTGTGTGTTTGCATTTTCATATTCACCCCAGTTTTCACGAAGTTTCTTGTCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805707 54 + 60714840 gctGTGTGTTTGCATTTTCTTATTCACCCCAGTTTTCACAAAGTGTCTTGTCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322710 54 - 106955855 gcTGTGTGTTTGCATTTTCATATTCACCCCAGTTTTCACGAAGTGTCTTGTCTC i nomLeu3.chr10 C 0 I 123 s rheMac3.chr19 60623476 54 + 64156825 gctgtgtgtttgcattttcaCATTCACCCCAGTTTTCATGAAGTGTCTTATCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55763946 54 + 59248254 gcTGTGTGTTTGCATTTTCACATTCACCCCAGTTTTCATGAAGTGTCTTATCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47869222 54 + 51301725 gctgtgtgTTTGCATTTTCACATTCACCCCAGTTTTCATGAAGTGTCTTATCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47577395 54 + 50890351 gcTGTGTGTTTGCATTTTCACATTCACCCCAGTTTTCATGAAGTGTCTTATCTC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45931360 1750 + 49145316 I a score=440166.000000 s hg38.chr19_GL949747v2_alt 614253 188 + 729520 CTGGGTGATCCACGTAGCTCCCCACTTCCTTATCTGATCTATGCTTGTCCTTTCATTGTTGTGTTACTACTTTGCTATAATGAGAGAGTGTTTTCGCTTTATAGGTTAACTTTTAGAACCTGAGCAGCCCCTCAGGGAAAACCCTGACAGTAGCTGGTTATTTTGCAATTAGAAAAACTAGCTGGGCA s panTro4.chr19 59883895 188 + 63644993 CTGGGTGATCCACATAGCTCCCCACTTCCTTATCTGATCTATGCTTGTCCTTTCATTGTTGTGTTACTACTTTGCTATAATGAGAGAGTGTTTTCGCTTTATAGGTTAACTTTTAGAACCTGAGCAGCCCCTCAGGGAAAACCCTGACAGTAGCTGGTTATTTTGCAATTAGAAAAACTAGCTGGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805761 188 + 60714840 CTGGGTGATCCACATAGCTCCCCACTTCCTCATCTGATCTATGCTTGTCCTTTCATTGTTGTGTTACTACTTTGCTATAATGAGAGAGTGTTTTCGCTTTACAGGTTAACTTTTAGAACCTGAGCAGCCCCTCGGAGAAAACCCTGACAGTAGCTGGTTATTTTGCAATTAGAAAAACTAGCTGGGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322887 188 - 106955855 CTGGGTGATCCACATAGCTCCCCACTTCCTCATCTGATCTATGCTTCTCCTTTCATTGTTGTATAACTACTTTGCTATAATGAGAGAGTGTTTTTGCTTTATAGGTTAACTTTTAGAACCTGAGCAGCCCCTCAGGGAAAACCCTGACAGTAGCTGGTTATTTTGCAATTAGAAAAACTAGCTGGGCA i nomLeu3.chr10 I 123 C 0 s rheMac3.chr19 60623530 186 + 64156825 CTGGGTGATCCACATAGCTTTCCACTTCCTCATCCGATCTATGCTTGTCCTTTCATTGTTGTGTTACTACTTTGTTGTAAT--GAGAGTGTTTTTACTTCATAGGCTAACTTTTAGAGCCTGAGCAGTCCCTCAGGGAAAACCCTAACAGTAGCTGGTTATTTTGCAATGAAAATAACTAGCTGGGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55764000 188 + 59248254 CTGGGTGATCCACATAGCTTTCCACTTCCTCATCCGATCTGTGCTTGTCCTTTCATTGTTGTGTTACTACTTTGTTGTAATGAGAGAGTGTTTTTACTTCATAGGCTAACTTTTAGAGCCTGAGCAGTCCCTCGGGGAAAACCCTAACAGTAGCTGGTTATTTTGCAATGAAAATAACTAGCTGGGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47869276 182 + 51301725 CTGGGTGATCCACATAGCTTTCCACTTCCTCATCCGATCTATGCTTGTCCTTTCATTGTTGTGTTACTGCTTTGTTGTAATGAGAGAGTGTTTTTACTTCATAGGCTAACTTTTAGAGCCTGAGCAGTCCCTCAGGGAAAACCCTAACA------GGTTATTttgcaattaaaataactagCTGGGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47577449 188 + 50890351 CTGGGTGATCCACATAGCTTTCCACTTCCTCATCCGATCTATGCTTGTCCTTTCATTGTTGTGTTACTACTTGGTTGTAATGAGAGAGAGTTTTTACTTCATAGGCTAACTTTTAGAGCCTGAGCAGTCCCTCAGGGAAAACCCTAACAGTAGCTGGTTATTTTGCAATTAGAAAAACTAGCTGGGCA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45931360 1750 + 49145316 I a score=1676010.000000 s hg38.chr19_GL949747v2_alt 614441 630 + 729520 ctgaggcaggtgaatcac--gaggtcaggagttcgagaccagcctggccaacttggtgaaacccccc-------atctctactaaaaatacaaaaaaattagctgggcacagtggtgaatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaatccgggaggcagaggttgtagtgagccgagattgcagcactgcactccagccagggtgac-aaagtgagactccgtctcaaaaaaaaaaaaaaaaaaaata------------caaaaaGtagctgagc---gtggtggtgggtgcccata--atcccagctagtcgggaggctgaggcaggagaactgtttgaacctgggaggcagaggttgcagtgagctgagatcgtactactgtactccagcctgggctgcagagtgaaa--ctatctcaaaaataagtaaataaaagtaaaaTGAGTTGAggtcttgctctgttgcccagatgggagtgcagtggcacaatcaaggctcactgcagtttcagtctcccaggctcaagcaatcctcccactgcagcctcctgagtagctgggactacaggcatgtaccaccacccactgct---aacttatttttcatggagatgggggtctcactatgttgcccaggc s panTro4.chr19 59884083 630 + 63644993 ctgaggcaggtgaatcac--aaggtcaggagttcgagaccagcctggccaacttggtgaaaccccccccccccaatctctactaaaaatacaaaaaa-ttagctgggcacagtggtgaatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaatccgggaggcagaggttgtagtgagccgagattgcagcactgcactccagccagggtgac-aaagtgagactctgtctcaaaaaaaaaaaaaaaaaaaa------------------aaGGagctgagc---gtggtggtgggtgcccata--atcccagctagtcgggaggctgaggcaggagaattgtttgaacctgggaggcagaggttgcagtgagctgagatcgtactactgtactccagcctgggctgcagagtgaaa--ctctctcaaaaataagtaaataaaaataaaaTGAGTTGAggtcttgctctgttgcccagatgggagtgcagtggcacaatcaaggctcactgcagtttcagtctcccaggctcaagcaatcctcccactgcagcctcctgagtagctgggactacaggcatgtaccaccacccactgct---aacttatttttcgtggagatgggggtctcactatgttgcccaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805949 617 + 60714840 ccaaggcgggtgaatcac--gaggtcaggagtttgagaccagcctgg-caacttggcgaaaccccc--------atctctactaaaaatacaaaaaa-ttagctgggcatagtggtgaatgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaatcccggaggcggaggttccagtgagccgagattgcagcactgcactccagccagggtgac-aaagtgagattccgtctcaaaaaaaaaaatacaaa---------------------aaGtagctgagc---gtggtggtgggtgcccata--atcccagctactcgagaggctgaggcaggagaattgtttgaacctgggaagcagaggttgcagtgagctgagatcgtactactgcactccagcctgggcagcagagtgaaa--ctgtctcaaaaataagt-aataaaaataaaaTGAGTTGAggtcttgctctgttgcccagatgggagtgcagtggcacaatcaaggctcactgcagtttcagtctcccaggctcaagtgatcctcccaccgcagcctcctgagtagctgggactacaggcatgtaccaccacccactgct---aacttattttttgtggagatgggggtctcactatgttgcccaggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103323075 642 - 106955855 ccgaggtgggtgaatcac--gaggtcaggagttcgagaccagcctggccaacttggtgaaaccccc--------atctgtactaaaaatacaaaaaa-ttagctgggcatagtggtgaatgcctgtaatcccagctactcgggaggctgagacaggagaattgcttgaatccgggagatagaggttgcagtgagccgagattgcagcactgcactccagccagggtgac-aaagtgagactctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaCCAAAAAGtagccgagcgtggtggtggtgggtgcccata--atcccagctactcgggaggctgaggcaggagaattgtttgaacctgggaggcggaggttgccgtgaactgagatcatactactgcactccagcctgggcagcagagtgaaa--ctgtctcaaaaataagtaaataaaaataaaatgagctgaggtcttgctctgttgtccagatgggagtgcagtggcacaatcaaggctcactgcagtttcaatctcccaggctcaagcaatcctcccatcgcagcctcctgagtagctgggcctacaggcatgtacc-ccacccactgct---aacttactttttgtggagatgggggtctcactatgttgcccaggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60623716 612 + 64156825 Tcgaggtgggcgaatcag--gaggtcaggagttcgagaccaacctggccaacttggtgaaacccc---------atctctactaaaaatacaaaaa--ttagctgggcatagtggtgaacacctgtaatcccagctgcacgggtggctgaggcaggagaattgcttgaatccgggaggtggaggttgcagcgagctgagattgtagcagtgcactccagccagggtgac---agtgacactccgtctcaaaaaaaat----aaata--------------------aaGtagctgagt---gtggtggtgggtgcccata--atcccagctactcggaagactgaggcaggagaattgtttgaacctgggaggcggaggttgcaatgagctgagatcataccactgtactccagcctgggcagcagagtgaaa--ctatctcaaaaataagtaaataaaagtaaaaCgagatgaggtttcactctgttgtccagatgggagtgcagtggcaccatcaagcctcactgcagtttcaatctcccaggctcaagcgatcctcccacctcggcctcctgagttgctgggactacaggcatgcaccaccacccactgct---aacttattttttgtggagatgggggtctcactgtgttgcccaggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55764188 613 + 59248254 Tcgaggtgggcgaatcag--gaggtcaggagttcgagaccaacctggccaacttggtgaaacccc---------atctctactaaaaatacaaaaa--ttagctgggcatagtggtgaacacctgtaatcccagctgcacgggtggctgaggcaggagaattgcttgaatccgggaggtggaggttgcagcgagctgagattgtagcagtgcactccagccagggtgac---agtgacactccgtctcaaaaaaaataaaaaaata--------------------aaGtagctgagt------gtggtgggtgcccata--atcccagctactcggaagactgaggcaggagaattgtttgaacctgggaggcggaggttgcaatgagctgagatcataccactgtactccagcctgggcagcagagtgaaa--ctatctcaaaaataagtaaataaaagtaaaaCgagatgaggtttcactctgttgcccagatgggagtgcagtggcaccatcaagcctcactgcagtttcaatctcccaggctcaagcgatcctcccacctcggcctcctgagttgctgggactacaggcatgcaccaccacccactgct---aacttattttttgtggagatgggggtctcactgtgttgcccaggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47869458 614 + 51301725 TCGAGGCGGGcgaatcag--gaggtcaggagttcgagaccaacctggccaacttggtgaaacccc---------atctctactaaaaat-caaaaa--ttagct-ggcatagtggtgaacacctgtaatcccagctacacgggtggctgaggcaggagaattgcttgaatccgggaggtggaggttgcagtgagctgagattgtagcaatgcactccagccagggtgac---agtgacactccgtctcaaaaaaaataaaaaaata--------------------aagtagctgagt---gtggtggtgggtgcccata--atcccagctactcggaagactgaggcaggagaattgtttgaacctgggaggcggaggttgcagtgagctgagatcacaccactgaactccaaccagggcagcagagtgaaa--ctgtctcaaaaataagtaaataaaagtgaAACGAGAttaggtttcactctgttgcccagatgggagtgcagtggcacaatcaagcctcactgcagtttcaatctcccaggctcaagcgatcctcccacctcggcctcctgagttgctgggactataggcatgcaccaccagccACTGCT---aacttattttttgtggagatgggggtctcactgtgttgcccaggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47577637 614 + 50890351 Tcgagaggggcgaatcag--gaggtcaggagttcgagaccaacctggccaacttggtgaaacccc---------atctctactaaaaatacaaaaa--ttagctgggcatagtggtgaacacctgtgatcccagctacacgggcagctgaggcaggagaattgcttgaatccgggaggtggaggtcgcagcgagctgagattgtagcagtgcactccagccagggtgac---agtgacactccgtctcaaaaaaaa--aataaata--------------------aaGtagctgagt---gtggtggtgggtgcccata--atcccagctactcggaagactgaggtaggagaattgtttgaacctgggaggcggaggttgcagtgagctgagatcataccactgtactccagccagggcagcagagtgaaa--ctatctcaaaaataagtaaataaaagtaaaaCgagatgaggtttcactctgttgcccagatgggagtgcagtggcaccaccaggcctcactgcagtttcagtctcccaggctcaagcgatcctcccacctcggcctcctgagttgctggggctacaggcacgtaccaccacccactgct---aacttattttttgtggagatgggggtctcactgtgttgcccaggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45933110 622 + 49145316 ccaaagtgggtggatcacctgaggtcaggagttcaagaccagcctggccaacatggaaaaacctt---------ctttctcctaaaaatacaaaaaa-gtatccaggtgtggtggtgcacacctgtaatcccagctactcgggaggccgaggcgggagaatcacttgaacctgggaggcagaggttgcagtgagccaagatggtgccattgcacttcagcctgggcaatgagagcgaaactccatctcaaaataaataataaaataaaat----------------gaggagctgggt---gcggtgg-gcatgcacgtgtcatctcatctactgaggaggctgaggcaggagaatggcttgaaaccagcaggcggaggttgcagtgagccaagatcatgccattgcactccagcctgggggagaaagtgagactctgtctcaaaaataa---aat-aaattaaaaagagaTGAggtcctgctctgttgcccagatgggagtgcagtgggacaatcaagg------gcagttttaacctcccaggttcaagcgatcctcccacctcagcctcctgagtagccgggactgcagctgcacaccaccccctcctaccatgaacttattttttgtggaaatgggggtctcactatgttgcccaggc i calJac3.chr22 I 1750 C 0 e canFam3.chr1 20036246 5018 - 122678785 I a score=1358383.000000 s hg38.chr19_GL949747v2_alt 615071 422 + 729520 tggGAGTTTGTTCTTGAAGAAGCAGGGTAGATGGTGA--GTGTCCTTGTTCGTGGCACAGCAGGAACTGGCATTTGAGACAGGAGTGCTAATCACCATCCCTCTCCACTCCTCCCTTGATTGTC---------------ATCACAGCTCCCACGTGGGACAAGATGGTGTCTTCGGCGCAGATGGGCTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGTTGAGCAAGTTCAAGTATCTGATCACGACCTTCTCCCTGGCACACGAGCTCCAGAAGATCCCCCACAAGGAGGTAGACAAGGCTGATGGGAAGCAACTGGTAGAAATCCTCACCACCCATTGTGACAGCTACTGGGTGGAGATGGCGAGCCTCCAGGTCTTTGAAAAGATGCACCGAATGGATCTGTCTGAGAGAGCAAAGGATGAAGTC s panTro4.chr19 59884713 410 + 63644993 tggGAGTTTGTTCTTGAAGAAGCAGGGTAGATGGTGA--GTGTCCTTGTTCATGGCACAGCAGGA------------GACAGGAGTGCTAATCACCATCCCTCTCCATTCCTCCCTTGATTCTC---------------ATCACAGCTCCCACGTGGGACAAGATGGTGTCTTCGGCGCAGATGGGCTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGTTGAGCAAGTTCAAGTATCTGATCACGACCTTCTCCCTGGCACACGAGCTCCAGAAGATCCCCCACAAGGAGGTAGACAAGGCTGATGGGAAGCAACTGGTAGAAATCCTCACCAGCCATTGTGACAGCTACTGGGTGGAGATGGCGAGCCTCCAGGTCTTTGAAAAGATGCACCGAATGGATCTGTCTGAGAGAGCAAAGGATGAAGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56806566 422 + 60714840 tggGAGTTTGTTCTTGAAGAAGCAGGGTAGATGGTGA--GTGTCCTTGTTCATGGCACAGTGGGGACTGGCATTTGAGACAGGAGTGCTAATCACCATCCCTCTCCATTCCTCCCTTAATTCTC---------------ATCAGAGCTCCCACGTGGGACAAGATGGTGTCTTCTGCGCAGATGGGCTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGTTGAGCAAGTTCAAGTTTCTGATCACGACCGCCTCCCTGGCACATGAGCTCCAGAAGATCCCCCACAAGGAGGTAGACAAGGCTGATGGGAAGCAACTGGCAGAAATCCTCACCAGCCATTGTGACAGCTACTGGGTGGAGATGGCGAGCATCCAGGTCTTTGAAAAGATGCACCGAATGGATCTGTCTCAGAGAGCAAAGGATGAACTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103323717 422 - 106955855 tggGAGTTTGTTCTTGAAGAAGCAGGGTAGATGGTGA--GTGTCCTCGTTCATGGCACAGTGGGGACTGGCATTTGAGACAGGAGTGCTAATCACCATCCCTCTCCATTCCTCCCTTAATTCTC---------------ATCACAGCTCCCACGTGGGACAAGATGGTGTCTCCGGCGCCGATGGGCTTCAACCTGCCGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGTTGAGCAAGTTCAAGTCTCTGATCACGACCGTCTCCCTGGCAAATGAGCTCCAGAAGATCCCCCACAAGGAGGTAGACAAAGCTGATAGGAAGCAACTGGCAGAAATCCTCACCAGCCATTGTCACAGCTACTGGGTGGAGATGGCGACCATCCAGGTCTTTGAAAAGATGCACCGAATGGATCTGTCTGAGAGTGCAAAGGACGAACTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624328 421 + 64156825 tggGAGTTTGTTCTTGAAGAAGCAGGGTAATGTGAGA--GTTCCCTTGTTCATGGCACCGAGGGGACTGGCA-CTGAGACAGGAGTGCTGATCACCATCCCTCTCCATTCCTCCCTTAATTCTC---------------CTCAGAACTCCCACGTGGGACAAGATGGTGTCTTCGACCCAGGTGAACTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGCTGAGCAAGTTCAAGTCTCTGCTCAGGACAGTCTCCCTGGGAAATGAGGTCCAGAAGATCCCCCAGAAGGAGGTAGACGAGGCGGATGGGAAGCAACTGGCGGAAATCCTCATCAGCCACTGTCACAGCTACTGGACGGAGTTGGCGACCATCCAGGTCTTTGAAAAGATGCATCGAGTGGATCTGTCTGAGAGAGCAAAGGACGAACTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55764801 421 + 59248254 tggGAGTTTGTTCTTGAAGAAGCAGGGTAATGTGAGA--GTTCCCTTGTTCATGGCACCGAGGGGACTGGCA-CTGAGACAGGAGTGCTGATCACCATCCCTCTCCATTCCTCCCTTAATTCTC---------------CTCAGAACTCCCACGTGGGACAAGATGGTGTCTTCGACCCAGGTGAACTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGCTGAGCAAGTTCAAGTCTCTGCTCAGGACAGTCTCCCTGGGAAATGAGGTCCAGAAGATCCCCCAGAAGGAGGTAGACGAGGCGGATGGGAAGCAACTGGCGGAAATCCTCATCAGCCACTGTCACAGCTACTGGACGGAGTTGGCGACCATCCAGGTCTTTGAAAAGATGCATCGAGTGGATCTGTCTGAGAGAGCAAAGGACGAACTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870072 420 + 51301725 tgggagtttGTTCTTGAAGAAGCAGGGTACTGTGAGG--GTGCCCTTGTTCATGGCACAGAGGGGACTGGCA-TTGAGACAGAAGTGCTGATCACCATCCCTCTCCGTTCCTCCCTTAATTCTC---------------ATCAGAACTCCCACGTGGGACAAGATGGTGTCTTCGACCGAGGTGAACTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGCTGAGCAAGTTCAAGTCTCTGCTCAGGACAGTCTCCTTGGGAAATGAAGTCCAGAAGATCCCCCAGAACGAGGTAGACGAGGCGGATGGGAAGCAACTGGCGGAAATCCTCATCAGCCATTGTCACAGCTACTGGACGGAGTTGGCGACCATCCAGGTCTTTG-AAAGATGCACCGAGTGGATCTGTCTGAGAGAGCAAAGGACGAACTC i papAnu2.chr19 C 0 M 192 s chlSab2.chr6 47578251 421 + 50890351 tggGAGTTTGTTCTTGAAGAAGCAGGGTAATGTGAGA--GTGCCCTTGTTCATGGCACTGAGGGGACTGGCA-TTGAGACAGGAGTGCTGATCACCATCCCTCTCCATTCCTCCCTTAATTCTC---------------ATCAGAACTCCCACGTGGGACAAGATGGTGTCTTCGACCCAGGTGAACTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGCTGAGCAAGTTCAAGTCTCTGCTCAGGACAGTCTCCCTGGGAAATGAGGTCCAGAAGATCCCCCAGAAGGAGGTAGACGAGGCGGATGGGAAGCAACTGGCGGAAATCCTCATCAGCCATTGTCACAGCTACTGGACGGAGTTGGCGACCATCCAGGTCTTTGAAAAGATGCACCGAGTGGATCTGTCTGAGAGAGCAAAGGATGAACTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45933732 408 + 49145316 tggGAATTTGTTCTTGAAGAAGCAGGGTAGATGGTGACTGTATGCTTGTCCATGGCACAGAGGGGACTGGCT-GTGAGACAGGGGTGCTGAC---------------GTCCTCCCTTCATTCTC---------------ACTGGAGCTCCCAAGTGGGACGAGATGGTGTCTTCTGTGCCACTGGACTTCAACCTGCAGGCTCTTCTGGAGCAGCTCAGCCAGGATGAGTTGAGCCAGTTCAAGTCTCTGATCAGGACCATCACCCTGGGAAATGAGCTACAGAAGATCCCCCAAACAGAGGTAGACGAGGCTGATGGGAAGCAACTGGCAGAAATCCTCACCAGCCATTGCCCCAGCTACTGGATGGAGACGGCCACCATCCAGGTCTTTGAAAAGATGCACCGGGTGGATCTGTCTGAGAGAGTGAAGGATGAACTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20041264 437 - 122678785 TGGGAGTTGGTTCCTAAAGCAGCAGGTTGGGCAGTGATAATTGCCCAGTTCTTGGCACAGAGGCAACTGTCATTTGAAGTAGGAATACTGAT--TCGCTCTCTTTCATTTCTTCCCTTATTCTTCTTTAATGCCCAAAGCTCAGATCTCTCATGTAGAACAAGATGGAACCTTCTGCACAGCTGGGTTTCAACCTGCAGCCCCTTCTAGAACAGTTTGCCCAGGATGAGCTGAGCCAGTTCAAGTCTCTGTTGAGGCCCCTTTCCCTACAAGATGAATTACAGCACATCCCTGCGACAGAGGTAGAGGAGGCCGATGGGAAGCAGCTGGCAGAAATTCTTATCAACCACTGCCCCAGCCACTGGGTAGAGATGGTGACCATCCAGATTTTTGACAAGATGAACCGAACCGATCTGTCTGAGAGAGCAAAGGATGAGCTC i canFam3.chr1 I 5018 C 0 a score=167046.000000 s hg38.chr19_GL949747v2_alt 615493 65 + 729520 AGAGGTGAGTGGAAATCGGTCCACACTGTGTCCTAGGAGGAAGCAGGCGTCCTCTCCAGGACTTT s panTro4.chr19 59885123 65 + 63644993 AGAGGTGAGCGGAAATCGGTCCACACTGTGTCCTAGGAGGAAGCAGGCGTCCTCTCCAGGACTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56806988 65 + 60714840 AGAGGTGAGTGGAAATCGGTCTACACTGTGTCCTAGGAGGAAGCAGGCGTCCTCTCCAGGACTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324139 65 - 106955855 AGAGGTGAGTGGAAATCGGTCCACCCTGTGTCCTAGGAGGAAGCAGGTGTCCTCTCCAGGACTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624749 63 + 64156825 AGAGGTGAGCAGAAATCGGTCCGCACTGTGTCCTAGGAGGAAGCAGGCGACCTCTCCAGGACT-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765222 63 + 59248254 AGAGGTGAGCAGAAATCGATCCGCACTGTGTCCTAGGAGGAAGCAGGCGACCTCTCCAGGACT-- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47578672 63 + 50890351 AGAGGTGAGCAGAAATCGGTCCACACTGTGTCCTAGGAGGAAGCAGACGACCTCTCCAGGACT-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45934140 65 + 49145316 AGAGGTGAGCGGAACTCGGTCCACACTGTGTCTTAGGGGAAAGCAGAAGTCCTCTCCAGGATGTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20041701 65 - 122678785 AGGGGTAAGTAGAAACAAGCCCACATGGTGTCCTAGGAGGAAGGAGGAGTAGCCTCCAGGGTTTT i canFam3.chr1 C 0 I 8 e papAnu2.chr19 47870492 192 + 51301725 M a score=23042.000000 s hg38.chr19_GL949747v2_alt 615558 13 + 729520 AGAAATTCAGAAg s panTro4.chr19 59885188 13 + 63644993 AGAAATTCAGAAg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807053 13 + 60714840 AGAAATTCAGAAg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324204 13 - 106955855 AGAAATTCAGAAg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624812 8 + 64156825 -----TTCAGAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765285 8 + 59248254 -----TTCAGAAg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47578735 8 + 50890351 -----TTCAGAAg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45934205 13 + 49145316 AGGAATTCAGAAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041766 8 - 122678785 I e papAnu2.chr19 47870492 192 + 51301725 M a score=83506.000000 s hg38.chr19_GL949747v2_alt 615571 46 + 729520 gccaggcgcgctggctcacgcctgtcgtcccagccctttgggaggc s panTro4.chr19 59885201 46 + 63644993 gccaggggcgctggctcatgcctgtcgtcccagcactttgggaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807066 46 + 60714840 gccaggcgtgctggctcacgcctgtcatcccagcactttgggaggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324217 46 - 106955855 gccaggcacgctcgctcacgcctgtcatcccagcactttgggaggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624820 46 + 64156825 gccaggcgcactggctcacgcctgtcatcccagcactttgggaggc i rheMac3.chr19 C 0 I 19 s macFas5.chr19 55765293 46 + 59248254 gccaggcgcactggctgacgcctgtcatcccagcactttgggaggc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47578743 46 + 50890351 gccaggcgcactggctcacgcctgtcatcccagcactttgggaggc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041766 8 - 122678785 I e calJac3.chr22 45934218 0 + 49145316 C e papAnu2.chr19 47870492 192 + 51301725 M a score=104210.000000 s hg38.chr19_GL949747v2_alt 615617 93 + 729520 tgaggcggttggaccacctgagggtcaggagtttgagaccag-cctgaccaacatggtgatgaaacagcatctctactaaaaatacaaaaattt s panTro4.chr19 59885247 90 + 63644993 tgaggcggttggaccacctgagggtcaggagtttgagaccag-cctgaccaacatgg---tgaaacagcatctctactaaaaatacaaaaattc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807112 91 + 60714840 cgaggtggttggatcacctgagggtcaggagtttgagaccagccctgaccaacatgg---tgaaacagcatctctactaaaaatacaaaaatta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324263 90 - 106955855 cgaggcggttggatcacctgagggtcaggagtttgagaccag-cctgaccaacatgg---tgaaacagcatctctactaaaaatacaaaaatta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55765339 89 + 59248254 caacttgggtggatcacctga-ggtcaggagtttgaaaccag-cctgaccaacatga---tgaaaccgcatctctactaaaaatataaaaatta i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47578789 89 + 50890351 cgacttgggtggatcacctga-ggtcaggagtttgaaaccag-cctgaccaacatgg---tgaaaccgcatctctactaaaaatataaaaatta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041766 8 - 122678785 I e calJac3.chr22 45934218 0 + 49145316 C e papAnu2.chr19 47870492 192 + 51301725 M e rheMac3.chr19 60624866 19 + 64156825 I a score=93606.000000 s hg38.chr19_GL949747v2_alt 615710 55 + 729520 gctggacgtggtggcagacacctgtaatcccagctactccgggaggctgaggcag s panTro4.chr19 59885337 55 + 63644993 gctggacgtggtggcagacacctgtaatcccagctactccgggaggctgaggcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807203 54 + 60714840 gctggttgtggtggcagacacctgtaatccccgctact-cgggaggctgaggcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324353 54 - 106955855 gctgggcgtggtggcagacacctgtaatcccagctact-tgggaggcggaggcag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55765428 54 + 59248254 gccaagcgtggtggcagacacctgtaatcccagctact-cgggaggctgaggcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870686 54 + 51301725 gccgagcgtggtggcagacacatgtaatcccagctact-cgggaggctgaggcag i papAnu2.chr19 M 192 C 0 s chlSab2.chr6 47578878 54 + 50890351 gccgggcgtggtggcagacacctgtaatcccagctact-caggaggctgaggcag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041766 8 - 122678785 I e calJac3.chr22 45934218 0 + 49145316 C e rheMac3.chr19 60624866 19 + 64156825 I a score=199493.000000 s hg38.chr19_GL949747v2_alt 615765 103 + 729520 gagaatcacttaaatctaggaggcgggggttgctatgagccgagatcacgccattgcaccccagcctgggcaacaagagc-aaaattctgtctc--aaaaaaaaaa s panTro4.chr19 59885392 105 + 63644993 gagaatcacttaaatccaggaggcgggggttgctatgagccgagatcacgccattgcaccccagcctgggcaacaagagc-aaaattctgtctcaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807257 101 + 60714840 gagaatcacttaaatccaggaggcaggggttgctatgagccgagatcacgccattgcaccccagcctgggcaacaagagcaaaaattctgtctc-----aaaaaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324407 102 - 106955855 gagaatcacttaaacccaggaggcgggggttgctatgagctgagatcacgccattgcaccccagcctgggcaacaagagc-aaaattccatctc---aaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624885 96 + 64156825 gagaatcccttgaacccaggaggtggaggttgcagtgagccgagatcacgccattgcactccagcctgggcaac--gagc-aaaactcggtctc-------aaaaa i rheMac3.chr19 I 19 C 0 s macFas5.chr19 55765482 96 + 59248254 gagaatcccttgaacccaggaggtggaggttgcagtgagccgagatcacgccattgcactccagcctgggcaac--gggc-aaaactcggtctc-------aaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870740 96 + 51301725 gaggatcccttgaacctgggaggcggaggttgctgtgaaccaagatcacgccactgcactccagcctgggcaac--gagc-aaaactccgtctc-------aaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47578932 96 + 50890351 gagaatcccttgaacccaggagatggaggttgctgtgagctgagatcacgccactgtactctagcctgggcaac--gagc-aaaacttggtctc-------aaaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041766 8 - 122678785 I e calJac3.chr22 45934218 0 + 49145316 C a score=12245.000000 s hg38.chr19_GL949747v2_alt 615868 5 + 729520 agaaa s panTro4.chr19 59885497 5 + 63644993 agaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807358 5 + 60714840 aaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324509 5 - 106955855 aaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624981 5 + 64156825 agaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765578 5 + 59248254 agaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870836 5 + 51301725 agaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47579028 5 + 50890351 agaaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20041774 5 - 122678785 AGGCA i canFam3.chr1 I 8 C 0 e calJac3.chr22 45934218 0 + 49145316 C a score=258319.000000 s hg38.chr19_GL949747v2_alt 615873 81 + 729520 TGGCATTGAGGCTTGGAGAGGGACTGCTTGTTCTGAATGCAGGTGCTGGATCTTCATAAACCCTGGTGTCTGTCCTGGTCC s panTro4.chr19 59885502 81 + 63644993 TGGCATTGAGGCTTGGAGAGGGACTGCTTGTTCTGAACGCAGGTGCTGGATCTTCATAAACCCTGGTGTCTGTCCTGGTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807363 81 + 60714840 TGGCATTGAGGCTTGGAGAGGGACTGCTTGTTCTGAACACAGGTGCTGGATCTTCATAAACCCTGGTGTCTGTCCTGGTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324514 81 - 106955855 CGGCATTGAGGCTTGGAGAGGGACTGCTTGTTCTGAACACAGGTGCTGGATCGTCATAAACCCTGGTGTCTGTCCTGGTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624986 81 + 64156825 TGGCATTGAGGCTTAGAGAGGGACTGCTTGTTCTGAATACAGGTGCTAGATCTTCATCAACTCTGGTGTCTGTCCTGGTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765583 81 + 59248254 TAGCATTGAGGCTTAGAGAGGGACTGCTTGTTCTGAATACAGGTGCTAGATCTTCATCAACTCTGGTGGCTGTCCTGGTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870841 80 + 51301725 tggcaTTGAGGC-TAGAGAGGGACGGCTTGTTCTGAACGCAGGTGCTAGATCTTCATCAACTCTGGTGTCTGTCCTGGTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47579033 81 + 50890351 TGGCATTGAGGCTTAGAGAGGGACTGCTTGTTCGTAACACAGGTGCTAGATCTTCATCAACTCTGGTGTCTGTCCTGGTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45934218 81 + 49145316 TGGCATTAAGGCTTAGCGAGAGCCTGCCTGTCCTGAACACAGATGCCAGATCTTCATAAACTCTGATGTCTGTCCTGGTCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20041779 71 - 122678785 TAACATTGAACCCTGAAGAGG--CCACCTGTCCTGAACCCAAATGCTAGACCTTCATAAAGTCTAGTGG-TGTC------- i canFam3.chr1 C 0 C 0 a score=2044.000000 s hg38.chr19_GL949747v2_alt 615954 8 + 729520 TTATTTTC s chlSab2.chr6 47579114 8 + 50890351 TTATTTTC i chlSab2.chr6 C 0 I 6 s calJac3.chr22 45934299 8 + 49145316 TTACTATC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20041850 8 - 122678785 TTCCATTC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56807444 0 + 60714840 C e nomLeu3.chr10 103324595 0 - 106955855 C e papAnu2.chr19 47870921 0 + 51301725 C e macFas5.chr19 55765664 0 + 59248254 C e rheMac3.chr19 60625067 0 + 64156825 C e panTro4.chr19 59885583 0 + 63644993 C a score=2198.000000 s hg38.chr19_GL949747v2_alt 615962 22 + 729520 TACCTACttctttttttttttt s calJac3.chr22 45934307 22 + 49145316 TACCTAttttttgttttgtttt i calJac3.chr22 C 0 I 796 s canFam3.chr1 20041858 22 - 122678785 TAGCTATTTCTACTCTGTCCTG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56807444 0 + 60714840 C e nomLeu3.chr10 103324595 0 - 106955855 C e chlSab2.chr6 47579122 6 + 50890351 I e papAnu2.chr19 47870921 0 + 51301725 C e macFas5.chr19 55765664 0 + 59248254 C e rheMac3.chr19 60625067 0 + 64156825 C e panTro4.chr19 59885583 0 + 63644993 C a score=227.000000 s hg38.chr19_GL949747v2_alt 615984 7 + 729520 tttttgt s canFam3.chr1 20041880 7 - 122678785 GTATTGT i canFam3.chr1 C 0 I 933 e ponAbe2.chr19 56807444 0 + 60714840 C e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103324595 0 - 106955855 C e chlSab2.chr6 47579122 6 + 50890351 I e papAnu2.chr19 47870921 0 + 51301725 C e macFas5.chr19 55765664 0 + 59248254 C e rheMac3.chr19 60625067 0 + 64156825 C e panTro4.chr19 59885583 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949747v2_alt 615991 899 + 729520 ccttttatttttttattttttattttattattAttattttttttattatactttaagttttagggtacatgtgcacattgtgcaggttagttacatatgtatacatgtgccatgctggtgcgctgcacccactaactcgtcatctagcattaggtatatctcccaatgctatccctcccccctccccccaccccaccacagtccccagagtgtgatgttccccttcctgtgtccatgtgatctcattgttcaattcccacctatgagtgagaatatgcggtgtttggttttttgttcttgtgatagtttactgagaatgatggtttccaatttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcattgtattccatggtatatatgtgccacattttcttaatccagtctatcattgttggacatttgggttggttccaagtctttgctattgtgaataatgctgcaataaacatacgtgtgcatgtgtctttatagcagcatgatttatagtcatttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccctgaggaatccccacaccgacttccacaatggttgaactagtttacagtcccaccaacagtgtgaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgatcgccattctaactggtgtgagatgatatctcatagtggttttgatttgcatttctctgatggccagtgatgatgagcattttttcatgtgttttttggctgcataaatgtcttcttttgagaagtgtctgttcatgtcgttcgcccactttttgatggggttgtttgtttttttcttgtaaa e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56807444 0 + 60714840 C e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103324595 0 - 106955855 C e chlSab2.chr6 47579122 6 + 50890351 I e papAnu2.chr19 47870921 0 + 51301725 C e macFas5.chr19 55765664 0 + 59248254 C e rheMac3.chr19 60625067 0 + 64156825 C e panTro4.chr19 59885583 0 + 63644993 C a score=23180.000000 s hg38.chr19_GL949747v2_alt 616890 14 + 729520 ttATTTTCTACCTA s panTro4.chr19 59885583 14 + 63644993 TTATTTTCTACCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807444 14 + 60714840 TTATTTTCTACCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324595 14 - 106955855 TTATTTTCTACCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60625067 14 + 64156825 TTATTTTCAACCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765664 14 + 59248254 TTATTTTCGACCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870921 14 + 51301725 TTATTTTCGACCTG i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e chlSab2.chr6 47579122 6 + 50890351 I a score=162032.000000 s hg38.chr19_GL949747v2_alt 616904 72 + 729520 TTTCTATCGCTTTCAGGTATCGTACAGTTGGCCTAACATATCTGTGGATTTAACCAATCCTAGATCAAAAAT s panTro4.chr19 59885597 72 + 63644993 TTTCTATCGCTTTCAGGTATCGTACAGTTGGCCTAACATATCTGTGGATTTAACCAATCCTAGATCAAAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807458 72 + 60714840 TTTCTATCCCTTTCAGGTATCGTACAGTTGGCCTAACATATCTGTGGATTTAACCAATCCTAGATCAAAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324609 72 - 106955855 TTTCTATCCCTTTCAGGTATCGTACAGTTGGCCTAACATATCTGTGGACTTAACTAATCCTAGATCAAAAAT i nomLeu3.chr10 C 0 M 692 s rheMac3.chr19 60625081 72 + 64156825 TTTCTATCCCTTTCAGGGATCGTACCGTTGGCCTGACATATCTGTGGATTTAACCAATCCCAGATCAAAAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765678 72 + 59248254 TTTCTATCCCTTTCAGGGATCATACCGTTGGCCTGACATATCTGTGGATTTAACCAATCCCAGATCAAAAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870935 72 + 51301725 TTTCTATCCCTTTCAGGGATCGTACCGTTGGCCTGACATATCTGTGGATTTATACAATCCCAGATCAAAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47579128 70 + 50890351 TTTCTGTCCCTTTCAGGGATCATACCATTGGCCTGATATATC--TGGATTTCACCAATCCCAGATCAAAAAT i chlSab2.chr6 I 6 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I a score=343871.000000 s hg38.chr19_GL949747v2_alt 616976 225 + 729520 AATGGGGGCAAAGACAATTAAAAATAACAATACAATAAAATGCACATGAACTATGGTTATTTAACTCttcttgagagaggatctcactctgtcacccaggctggaatttagcagcacgatctcggctcactgcaacctccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagccgggattacaagcatgtcccaccatgcctggctga----tttt s panTro4.chr19 59885669 225 + 63644993 AATGGGGGCAAAGACAATTAAAAATAACAATACAATAAAATGCACATGAACTATGGTTATTTAACtcttcttgagagaggatctcactctgtcacccaggctggaatttagcggcacgatctcggctcactgcaacctccgcctcccgggttcaagcgattctcctgcctcggcctcccgagtagccgggattacaagcatgtcccaccacgcctggctga----tttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807530 225 + 60714840 AATGGGGGCGAAGACAATTAAAAATAACAATACAATAAAATGCACATGAACTATGGTTATTTAACTCttcttgagagaggatctcactctgtcgcccaggctggaatttagtggcacgatctcggctcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgagtagccgggattacaagcatgtcccaccacgcctggctga----tttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60625153 213 + 64156825 AATGGGGGCAAAGACAATTAAAAAT-----TACAATAAAATGCACATGAACTGTGGttattt---ctctcttgagagaggatctcgctctgtcacccaggctggggtgcagtggcatgatctcggctcactgcagcctccgcctcctgggttcaagtgattctcctgcctcagcctcccgagtagccagaattacaagcacgtcccaccatgcctggctga-------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765750 213 + 59248254 AATGGGGGCAAAGACAATTAAAAAT-----TACAATAAGATGCACATGAACTGTGGttattt---ctctcttgagagaggatctcgctctgtcacccaggctggggtgcagtggcatgatctcggctcactgcagcctccgcctcctgggttcaagtgattctcctgcctcagcctcccgagtagccagaattacaagcacgtcccaccatgcctggctga-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871007 213 + 51301725 AATGGGCGCAAAGACAATTAAAAAT-----GACCATAAAATGCACATGAACTGTGGTCATTT---CTCTCTTGagagaggatcttgctctgtcacccaggctggggtgcagtggcatgatctcagctcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgagtagccaggattacaggcacgtcccaccacgcctggctga-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47579198 186 + 50890351 AATGGGGGCAAAGACAGTTAAAAAT-----TACAATAAAATGCACATGAACTGTGGTTATTT---CTCTCTTGAGAGAGGATCTCGCTCTGTCACCcag-------------------------------tgcaacctctgcctcctgggttcaagcgattctcctgccttagcctcccgagtagccagaattacaggcacgtcccaccatgcctggctgatttt---- i chlSab2.chr6 C 0 I 338 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103324681 692 - 106955855 M a score=1890.000000 s hg38.chr19_GL949747v2_alt 617201 13 + 729520 ttttttttttttt- s panTro4.chr19 59885894 13 + 63644993 ttttttttttttt- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807755 13 + 60714840 ttttttttttttt- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60625366 5 + 64156825 ---------tttta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765963 5 + 59248254 ---------tttta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871220 5 + 51301725 ---------tttta i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103324681 692 - 106955855 M e chlSab2.chr6 47579384 338 + 50890351 I a score=189888.000000 s hg38.chr19_GL949747v2_alt 617214 114 + 729520 ttt-------gtattctaaatagagatggggtttcaccatgttagccaggatagtctcgatgtcgtgacctcatgatctgcccgcctcggcctcccaaagtgttgggattacaggcgtgag s panTro4.chr19 59885907 111 + 63644993 ----------gtattttaaatagagatggggtttcaccatgttagccaggatagtctcgatgtcgtgacctcatgatctgcccgcctcggcctcccaaagtgttgggattacaggcgtgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807768 121 + 60714840 tttttttttggtattttaaatagagatggggtttcaccatgttagccaggatagtctcgatgtcctgacctcgtgatctgcccacctcggcatcccaaagtgttgggattacaggcgtgag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60625371 112 + 64156825 ttt-------gtgttttaaatacagatggggtttcaccatgttagccaggatagtctc--tgtcctgacctcgtgatctgcctactttggcctcccaaaatgttgacattacaggcgtgag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765968 112 + 59248254 ttt-------gtgttttaaatacagatggggtttcaccatgttagccaggatagtctc--tgtcctgacctcgtgatctgcctactttggcctcccaaaatgttgagattacaggcgtgag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871225 114 + 51301725 ttt-------gtattttaaatagagatggggttttaccatgttagccaggatagtctcgatgtcctgacctcgtgatctgcccactttggcctcccaaaatgttgggattacaggcgtgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47579722 112 + 50890351 ttt-------gtgttttaaatagagattgagtttcaccatgttagccaggatagtctc--tatcctgacctcgtgatctgcccgctttggcctcccaaaatgttgagatgacaggcgtgag i chlSab2.chr6 I 338 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103324681 692 - 106955855 M a score=578072.000000 s hg38.chr19_GL949747v2_alt 617328 272 + 729520 ccaccgcacccagccAGCAAGTGCATTTAGAACTACTCT--ACTTTCTACCCCATAACt----------ttt--------ttttttgtttgtttgagacaagtctcactctgtcacccaggatggagtgcagcagcacaatctcagcttattgcaactcccg-ccccctgggttcaagtgtttctcctgcatcagcctcttgaatagctaggattatacaggcacctgccactgtgcctggctaaattttgtattttaata-------------gagatggggtttcacta-tgttggccaggctgg s panTro4.chr19 59886018 272 + 63644993 ccaccgcacccagccAGCAAGTGCATTTAGAACTACTCT--ACTTTCTACCCCATAACt----------ttt--------ttttttgtttgtttgagacaagtctcactctgtcacccaggatggagtgcagcagcacaatctcagcttattgcaactcccg-ctccctgggttcaagcgattctcctgcatcagcctcttgaatagctaggattatacaggcacctgccactgagcctggctaaattttgtattttaata-------------gagatggggtttcacta-tgttggccaggctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807889 283 + 60714840 ccaccgcacccagccAGCAAGTGCATTTAAAACAACTCT--ACTTTCTACCCCATAACtttttttacacttt--------ttttttgtttgtttgagacaagtctcactctgtcacccaggatggagtacagtggcacaatctcagcttattgcaactcccacccccccgggttcaagcgattctcctgcatcagcctcttgaatagctagggttatacaggcacctgccactgcgcctggctaaattttgtattttaata-------------gagatggggtttcacta-tgtcggccaggctgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103325373 294 - 106955855 CCACTGCACCCAGCTAGCAAGTGCATTTAAAACAACTCTAAACTTTCTACCCCATAACt----------tttttttacgcttttttttttgtttgagacaagtctcactctgtcgcccaggatggagtgcagtggcacaatctcagcttattgcaactcccg-ccccccgggttcaagcgattctcctgcatcagcctcttgagtagctgggattatacaggcacctgccactgcgcctggctaaattttgtttttttgtgtttttttttttttgaga--gagtttcactcttgttgcccaggctgg i nomLeu3.chr10 M 692 I 48 s rheMac3.chr19 60625483 271 + 64156825 ccactgcacccagccAGCTAGTGCATTTAAAACAACTCT--ACTTTCTACCCCACAACT----------TTATTTTACA-Ctttttgtttgtttgagacgagtctcactctgtcgtacaggatggagtgcagtggcgcaatctcagttca--------tctg-ccccccgggttccagcgattctcctgcatcagcctcctgagtagctgggattatacaggcacctgccactgtgcctggctaaattttgtattttaata-------------gagacgggatttcacta-tgttggacaggctgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766080 271 + 59248254 ccactgcacccagccAGCTAGTGCATTTAAAACAACTCT--ACTTTGTACCCCACAACT----------TTATTTTACA-Ctttttgtttgtttgagacgagtctcactctgtcgtgcaggatggagtgcagtggcacaatctcagttca--------tctg-ccccctgggttccagcgattctcctgcatcagcctcctgagtagctgggattatacaggcacctgccactgtgcctggctaaattttgtattttaata-------------gagacgggatttcacta-tgttggacaggctgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871339 279 + 51301725 ccaccgcacccagccagctaGTGCATTTAAAACAACTCC--ACTTTCTACCCCATAAct----------ttattttaca-ctttttgtttgtttgaaacaagtctcactctgtcatgcaggatggagtgcggtggcgcaatctcagttcattgcaacctcca-ccccccgggttcaagcgattctcctgcatcggcctcctgagtagctgggattatacaggcacctgccactgtgcctggctaaattttgtattttaata-------------gagacaggatttcacta-tgttggacaggctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47579834 278 + 50890351 ccaccgcgcccagccAGCTAGTGCGTTTAAAACAACTCT--ACTTTGTACCCCACAACT----------TTATTTCACA-C-TTTGGtttgttggagacgagtctcactctgtcaagcaggatggagtgcagtggcgcaatctcagttcgttgcatcctccg-ccccccgggttcaagtgattctcctgcatcagcctcctgagtagctgggattatacaggcacctgccactgtgcctggctaagttttgtattttaata-------------gagacgggatttcacta-tgttggacaggctgg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I a score=27078.000000 s hg38.chr19_GL949747v2_alt 617600 15 + 729520 tcttgaactcctgac s panTro4.chr19 59886290 15 + 63644993 tcttgaactcctgac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808172 15 + 60714840 tcttgaaatcctgac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60625754 15 + 64156825 tcttgaactcctgat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766351 15 + 59248254 tcttgaactcctgat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871618 15 + 51301725 tcttgaactcctgat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580112 15 + 50890351 tcttgaactcctgat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103325667 48 - 106955855 I a score=351887.000000 s hg38.chr19_GL949747v2_alt 617615 187 + 729520 cacgtgatcaacccgcctcagcctcccaatgtgctggaattacaggtgtgagccgccatgcccagcTACACtttttttt------gaaacggggtctcgttttcttgctcaggctggagtacaatggggcaatcacagctcactgcagccttgacctcccagacttgagcaatcctaccactatggcctccca s panTro4.chr19 59886305 187 + 63644993 tatgtgatcaacccgcctcagcctcccaatgtgctggaattacaggtgtgagccaccatgcccagcTACACtttttttt------gaaacggggtctcattttcttgctcaggctggagtacaatggggcaatcacagctcactgcagccttgacctcccagacttgagcaatcctgccactatggcctccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808187 187 + 60714840 cacgtgatcaacccgcctcagcctcccaatgtgctggaattacaggtgtgagccactatgcccagctACACtttttttt------gaaacggggtctcattttcttcctcaggctggagtacaatggggcaatcacagctcactgcagcctcgacctcccagacttgagcaatcctgccactatagcctccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103325715 162 - 106955855 caagcgattctcctgcctcagcctccctagtagctgggattataggcatgtgccaccacgcctggctaagtttgtatttttagtagagacggtgtttctccatgttggtcaggctg-------------------------------atctcgaactcccgacctcaggtgatccgcctgcctcggcctccca i nomLeu3.chr10 I 48 I 45 s rheMac3.chr19 60625769 185 + 64156825 tgtgtgatcaaaccgcctcagcctcccaatgtgttggaattacaggcgtgagccgcca--cCTGGCTATACTGtttttt------gaaacagggtctcgccttgtggctcaggctggagtacagtggggcaatcatagctcattgcagcctcgacctcccagactcgagcaatcctgccactatagcctccca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766366 185 + 59248254 tgcgtgatcaaaccgcctcagtctcccaatgtgttggaattacaggcgtgagccgcca--cCTGGCTATACTGtttttt------gaaacagggtctcgctttgtggctcaggctggagtacagtggggcaatcatagctcattgcagcctcgacctcccagactcgagcaatcctgccactatagcctccca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871633 185 + 51301725 tgcGTGATCAaaccgcctcagtctcccaatgtgttggaattacaggcgtgagccgcca--cctggctatactttttttt------gaaacggggtctcactttgtggctcaggctggagtacactggggcaatcacagctcactgcagcctcgacctcccagactcgaGCAATCCTGCCACCATAGCCTCCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580127 185 + 50890351 tgcgtgatcaaaccgcctcagtctcccagtgtgttggaattacaggcgtgagccacca--cCTGGCTATACTGtttttt------gaaacggggtctcgctttgtggctcaggctggagtacagtggggcaatcacagctcactgcagcctcgacctcccagactcgagcaatcctgccactatagcctccca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I a score=29624.000000 s hg38.chr19_GL949747v2_alt 617802 26 + 729520 ccacacctcgctcattcttgtatata s panTro4.chr19 59886492 26 + 63644993 ccacacctcgctcattcttgtatata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808374 26 + 60714840 ctacacctcactgattcttgtatttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60625954 22 + 64156825 ccacacctcgctgatctttgta---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766551 22 + 59248254 ccacacctcgctgatctttgta---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871818 23 + 51301725 CCACGCCTCgctgatctttgtat--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580312 23 + 50890351 ccacacctcgctgatctttgtat--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103325877 45 - 106955855 I a score=267396.000000 s hg38.chr19_GL949747v2_alt 617828 133 + 729520 tatatattttt-----gtagagatagggtttcaccatgttgcccaggctggtctcgaacttctgtgggctcaaccgatcctcctgccttggcttcccacagtcctgggatcagaaacatgagccacagtgcctggccA s panTro4.chr19 59886518 135 + 63644993 ttttttttttt---ttgtagagatagggtttcaccatgttgcccaggctggtctcgaacttctgtgggctcaaccgatcctcctgccttggcttcccacagtcctgggatcagaaacatgagccacagtgcctggccA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808400 138 + 60714840 ttttttttttttttttgtagagatagggtttcaccatgttgcccaggctggtctcgaacttctgtaggctcaaccaatcctcctgccttggcttcccaaagtcctgggatcagaaacatgagccacagtgcctggccA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103325922 129 - 106955855 tttgtatttta-----atagagatggggtttcattatgttggccaggctggtcttgaactcctgaccgtgtgatcaa----cccgcctcggcttcccaatgtgctggaattacaggtgtgagccaccatgtccagcTA i nomLeu3.chr10 I 45 I 1552 s rheMac3.chr19 60625976 129 + 64156825 ----ttttttt-----gtagagacagggtttcaccatgttgccgaggctggtctgaaactcctgtgggctcagctgatcctcctgacttggcttcccaaagtcctgggatcagaaacatgagccacagtgcctggccA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766573 129 + 59248254 ----ttttttt-----gtagagacagggtttcaccatgttgccgaggctggtctgaaactcctgtgggctcagctgatcctcctgacttggcttcccaaagtcctgggatcagaaacatgagccacagtgcctggccA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871841 129 + 51301725 ----ttttttt-----gtggagacagggtttcaccatgttgctgaggctggtctgaaactcctgtgGGCTCAGCtaatcctcctgacttggcttcccaaagtcctgggatcagaaacatgagccacagtgcctggcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580335 129 + 50890351 ----ttttttt-----gtagagacagggtttcaccatgttgccgaggctggtctgaaactcctgtgggctcagctgatcctcctgacttggcttcccaaagtcctgggatcagaaacatgagccacagtgcctggccA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I a score=254955.000000 s hg38.chr19_GL949747v2_alt 617961 147 + 729520 Gtgcagctttatttacagtaaccaagatatagagtcagtctaagtgaccatcagtggatgaataaaaaat---gtgcccgttgggtaccctgcctactgcctgggttatgagattgttggg----accccaagccttaAAAAGGAAACATGGTA s panTro4.chr19 59886653 147 + 63644993 Gtgcagctttatttacagtaaccaagatacagagtcagtctaagtgaccatcagtggatgaatagaaaat---gtgcccgttgggtaccctgcctactgcctgggttatgagattgttggg----accccaagccttaAaaaggaaacatggta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808538 147 + 60714840 Gtgcagctttatttacagtaaccaagatatagggtcagtctaagtgaccatcagtggatgaatagaaaat---gtgcctgttgggtaccctgcctactgcctgggttatgagattgttggg----accccaagcctcaAaaaggaaacatggta i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60626105 150 + 64156825 GTTcagctttatttactgttaccaagatacagagtcagtctaagtgaccatcactggataaatggaaaatgtggtgcccgttgggtacactgcctactgcctgggttacgagattattggg----accccaagcctcaAaaaggaaacatggta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766702 148 + 59248254 Gtgcagccttatttacagttaccaagatac--agtcagtctaagtgaccatcactggataaatggaaaatgtggtgcccgttgggtacactgcctactgcctgggttatgagattattggg----accccaagcctcaAaaaggaaacatggta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871970 148 + 51301725 gtgCAGCTTTATTTACAGTTACCAAGATAG--AGTCAGTCTAAGTGACCATCACTGGATGAATGGAAAATGTGGTGCCTGTTGGGTACACTGCCTACTGCCTGGGTTATGAGATTATTGGG----ACCCCAAGcctcaaaaaggaaatatggta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580464 154 + 50890351 GtgcagctttatttacagttaccaagatacagagtcagtctaagtaaccatcactggatgaatggaaaatgtggtgcctgttgggtacactgcctactgcctgggttatgagattattgggacccaccccaagcctcaAAAAGGAAACATGGTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103326051 1552 - 106955855 I a score=534334.000000 s hg38.chr19_GL949747v2_alt 618108 252 + 729520 ggccgggcacagtggctcacgcctgtaatcacagcactttgggaggccaaggcgggtggatcacttgaggccaggagtttgagaccagtcaggccaatgtggtgaaaccctgtctctactaaaaata-taaaaaaatcagccgggcgtggtggcacactcctgtagtcccagctacttgggaggctgaggc-aggaggattgcttgaaccagagagtcagaggttgcagtgagccaagatcgtgccactgcgct s panTro4.chr19 59886800 250 + 63644993 ggccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcacttgaggccaggagtttgagaccagtcaggccaatgtggtgaaaccgtgtctctactaaaaata-taaaaaaatcagccgggcgtggtggcacactcctgtagtgccagctacttgggaggctgaggc-aggaggattgcttgaaccagagagtcag--gttgcagtgagccaagatcgtgccaatgcact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808685 254 + 60714840 ggctgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcacttgaggccaggagtttgagaccagtcaggccaatgtggtgaaaccctgtctctactaaaaatatttaaaaaattagccgggtgtggtggcacactcctgtagtctcagctacttgggaggctgaggcaaggaggattgcttgaaccagggagtcagaggttgcagtgagccaagatcgtgccactgcact i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60626255 252 + 64156825 ggctgggcacggtggctcacgcctgtaatcccatcactttaggagaccaaggcgggtggatcacttgaggccaggagtttgagagcagcctggccaacgtggggaaaccctgtctctactaaaaata-caaaaaaattagccaggcatggtggtgggcgcctgtagtcccagctacttgggaggctgagga-aagaggagtgctggaaccagggagttggaggttgcagtgagctgagattgtaccatttcact i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766850 252 + 59248254 ggctgggcacggtggctcacgcctgtaatcccatcactttaggagaccaaggcgggtggatcacttgaggccaggagtttgagagcagcctggccaacgtggggaaaccctgtctctactaaaaata-caaaaaaattagccaggcatggtggtgggcgcctgtagtcccagctacttgggaggctgaggc-aagaggatcgctggaaccagggagttggaggttgcagtgagctgagattgtaccatttcact i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872118 252 + 51301725 ggctgggcacggtggctcacacctgtaatcccatcactttaggagaccaaggcgggtggatcacttgaggccaggagtttgagaccagcctggccaacgtggtgaaaccctgtctctactaaaaata-caaaaaaattatccaggcgtggtggtgggcacctgtagtcccagctacttgggaggctgaggc-aggaggatcacttgaaccagagacttggaggttgcagtgagctgagactgcaccattgcact i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580618 252 + 50890351 ggctggccacggtggctcaagcctgcaatcccatcacttcaggagaccaaggcgggtggatcacttgaggccaggagtttgagaccagcctggccaacgtggggaaaccctgtctctactaaaaata-caaaaaaattagccaggcatggtggtgggcacctgtagtcccagctacttgggaggctgaggc-aggaggatcgctggaaccagggagttggaggttgcagtgagctgagattgcaccgtttcact i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935125 248 + 49145316 ggccaggcgcagtagctcacgcctgtaaccccagcactctgggaggccgaggcaggtggatcac--aaggtcaggagttcaagaccagcctggccaagatgttgaaaccccgtctctactaaaaata-c--aaaaattagctgggcatggtggtgcatgcctgtaatcccagctactcgggaggctgaggc-aggagaatcacttgaacccgggaggcggaggctacagtgagctgagatcgtgtaactgcact i calJac3.chr22 I 796 C 0 e canFam3.chr1 20041887 933 - 122678785 I e nomLeu3.chr10 103326051 1552 - 106955855 I a score=112967.000000 s hg38.chr19_GL949747v2_alt 618360 42 + 729520 ccagcctgggtgac--agcaagactccatctc---aaaaaaaaaaaa s panTro4.chr19 59887050 42 + 63644993 ccagcctgggtgac--agcaagactccatctc---aaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808939 42 + 60714840 ccagcctgggtgac--agcaagactccatctc---aaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103327603 42 - 106955855 ccagcctgggtgac--agcaagactccatctc---aaaaaaaaaaaa i nomLeu3.chr10 I 1552 C 0 s rheMac3.chr19 60626507 45 + 64156825 ccagcctgtgtgacggagcaagactcccactc--aaaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55767102 44 + 59248254 ccagcctgggtgacggagcaagactccctctc---aaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872370 42 + 51301725 --agcctgggtgacggagcaagactccctctc---aaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580870 47 + 50890351 ccagcctgggagacagagcgagactccctctcaaaaaaaaaaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935373 44 + 49145316 ccagccttaatgacggagcaagactccatctc---aaaaaaaaaaaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I a score=817.000000 s hg38.chr19_GL949747v2_alt 618402 5 + 729520 caaa--c s panTro4.chr19 59887092 4 + 63644993 aaaa--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808981 5 + 60714840 aaaa--g i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103327645 7 - 106955855 aaaaaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60626552 4 + 64156825 aaaa--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55767146 4 + 59248254 aaaa--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872412 4 + 51301725 aaaa--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580917 4 + 50890351 aaaa--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45935417 0 + 49145316 C a score=139229.000000 s hg38.chr19_GL949747v2_alt 618407 63 + 729520 aaaCATGGTATTAATTACACAAT-GGAATACTCCTCAACCTTAAGGAACTCCTATCTTTTTATT s panTro4.chr19 59887096 61 + 63644993 --acatggtattaattacacaat-ggaatactcctcaaccttaaggaaatcctatcttttTATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808986 63 + 60714840 aaacatggtattaattacacaat-ggaatactcctcaaccttaaggaaatcctatcttttTATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103327652 63 - 106955855 aAACATGGTATTAATTACATAAT-GGAATACTCCTCAAACTTAAGGAAATCCTATCGTTTTATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60626556 56 + 64156825 ----ttggtattaattacacaat-ggaatactcttcaaccttaaggaaatcctgtcttc---tg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55767150 56 + 59248254 ----ttggtattaattacacaat-ggaatactcttcaaccttaaggaaatcctgtcttc---tg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872416 56 + 51301725 ----ttgatactaattacacaat-ggaatactcttcaaCCTTAAGGAAATcctctcttc---tt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580921 57 + 50890351 ----TTGGTATTAATTACACAATGGGAATACTCTTCAACCTTAAGGAAATCCTGTCTTC---TG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3210275 63 - 49145316 AAACATGGTATTATTTACACCAT-GAAATACTCTTCGATCTTAAGGAAATCCTATTCAAAAATA i calJac3.chr22 T 27878 n 0 e canFam3.chr1 20041887 933 - 122678785 I a score=55788.000000 s hg38.chr19_GL949747v2_alt 618470 19 + 729520 TAAAAATTGCCAGTTTTAT s panTro4.chr19 59887157 19 + 63644993 TAAAAATTGCCAGTTTTAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809049 19 + 60714840 TAAAAATTGCCAGTTTTAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103327715 19 - 106955855 TAACAATTGCCAGTTTTAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60626612 19 + 64156825 taaaaaTTGCCAGTTTTAT i rheMac3.chr19 C 0 I 394 s macFas5.chr19 55767206 19 + 59248254 taaaaaTTGCCAGTTTTAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872472 19 + 51301725 taaaaattgccAGTTTTAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580978 19 + 50890351 TAAAAATTGACAGTTTTAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935417 19 + 49145316 aaaaaaTTGCCGTTTTTAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I a score=60650.000000 s hg38.chr19_GL949747v2_alt 618489 28 + 729520 TTCAGCTAGAGATCACTTTTTAGCATAA s panTro4.chr19 59887176 28 + 63644993 TTCAGTTAGAGATCACTTTTTAGCATAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809068 28 + 60714840 TTCAGCTAGAAATCACTTTTTAACATAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103327734 28 - 106955855 TTCAGCTAGAGATCACTTTTTAGCATAA i nomLeu3.chr10 C 0 I 304 s macFas5.chr19 55767225 28 + 59248254 TTCAGTTGGAGATCACTTCTTAGCATAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872491 28 + 51301725 TTCAGTTGGAGATCACTTCTTAGCATAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580997 28 + 50890351 TTCAGTTGGAGATCACCTCTTAGCATAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935436 28 + 49145316 TCCAGGTAGAGATCACTCCTTAGCGTAA i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e rheMac3.chr19 60626631 394 + 64156825 I a score=37777.000000 s hg38.chr19_GL949747v2_alt 618517 17 + 729520 TGTTTCCTGTCTTTAAC s panTro4.chr19 59887204 17 + 63644993 TGTTTCCTGTCTTTAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809096 17 + 60714840 TGTTTCCTGTCTTTAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103328066 17 - 106955855 TGTTTCCTGTCTTTAAC i nomLeu3.chr10 I 304 C 0 s macFas5.chr19 55767253 17 + 59248254 TATTTCCTATCTTTAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872519 17 + 51301725 TATTTCCTATCTTTAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47581025 17 + 50890351 TATTTTCTATCTTTAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935464 17 + 49145316 TGTTTCCTGTCTTTAAT i calJac3.chr22 C 0 I 9 e canFam3.chr1 20041887 933 - 122678785 I e rheMac3.chr19 60626631 394 + 64156825 I a score=23937.000000 s hg38.chr19_GL949747v2_alt 618534 13 + 729520 -AATGGGTGAGGGT s panTro4.chr19 59887221 13 + 63644993 -GATGGGTGAGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809113 13 + 60714840 -GATGGGTGAGAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103328083 13 - 106955855 -GATGGATGAGGGt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55767270 14 + 59248254 GGATGGGTGAGGGt i macFas5.chr19 C 0 I 314 s papAnu2.chr19 47872536 14 + 51301725 GGATGGgtgagggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47581042 14 + 50890351 GGATGGGTGAGGGt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45935481 9 + 49145316 I e rheMac3.chr19 60626631 394 + 64156825 I a score=1903.000000 s hg38.chr19_GL949747v2_alt 618547 18 + 729520 -------tttttttttttttttttt s panTro4.chr19 59887234 12 + 63644993 -------tttttttttttt------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809126 14 + 60714840 -------TTTTTTGTTGTT----GT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103328096 12 - 106955855 -------ttgtttttttgg------ i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55767598 18 + 59248254 ttttttcctttttttttt------- i macFas5.chr19 I 314 C 0 s papAnu2.chr19 47872550 18 + 51301725 ttgttttttttttttttt------- i papAnu2.chr19 C 0 I 266 s chlSab2.chr6 47581056 17 + 50890351 -ttttggttttttttttt------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45935481 9 + 49145316 I e rheMac3.chr19 60626631 394 + 64156825 I a score=2251.000000 s hg38.chr19_GL949747v2_alt 618565 13 + 729520 ggtttggtttgga s panTro4.chr19 59887246 8 + 63644993 -----ggtttgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809140 13 + 60714840 TGTTTGGTTTGGA i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45935481 9 + 49145316 I e nomLeu3.chr10 103328108 0 - 106955855 C e chlSab2.chr6 47581073 0 + 50890351 C e papAnu2.chr19 47872568 266 + 51301725 I e macFas5.chr19 55767616 0 + 59248254 C e rheMac3.chr19 60626631 394 + 64156825 I a score=3273.000000 s hg38.chr19_GL949747v2_alt 618578 12 + 729520 ttttggtttt--gc s panTro4.chr19 59887254 12 + 63644993 ttttggtttt--gc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809153 12 + 60714840 TTTTGGTTTT--AG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103328108 11 - 106955855 -tttggtttt--gg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55767616 6 + 59248254 ------tttttt-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872834 10 + 51301725 ttttggtttt---- i papAnu2.chr19 I 266 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45935481 9 + 49145316 I e chlSab2.chr6 47581073 0 + 50890351 C e rheMac3.chr19 60626631 394 + 64156825 I a score=50103.000000 s hg38.chr19_GL949747v2_alt 618590 22 + 729520 ttttgagtcgaagtttcactct s panTro4.chr19 59887266 22 + 63644993 ttttgagtcgaagtttcactct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809165 22 + 60714840 TTTTGAGACAAAGTTTCACTCT i ponAbe2.chr19 C 0 I 756 s nomLeu3.chr10 103328119 22 - 106955855 ttttgagacgaagtttcactct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60627025 22 + 64156825 ttttgagacgaagtttcactct i rheMac3.chr19 I 394 C 0 s macFas5.chr19 55767622 22 + 59248254 ttttgagacgaagtttcactct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872844 21 + 51301725 -tttgagacgaagtttcactct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47581073 18 + 50890351 ----gagacgaagtttcactct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45935481 9 + 49145316 I a score=449109.000000 s hg38.chr19_GL949747v2_alt 618612 264 + 729520 tgtctcccaggctagagtgcaatggcgcgatctcggctcactgtgacctcctcctcccaggtttaagtgattctcctgcctcagcctccagagtagctgggattacaggcgcctaccaccatgcccgctaatttttgtattttagtagagacagggttttaccatgttgaccagactggtctcgaactcccgacctcaggt--------------gatctgcccacctcagcctcccagagtgctgggattacaggtgtgagcaaccatgcccggccA s panTro4.chr19 59887288 264 + 63644993 tgtctcccaggctagagtgcaatggcgcgatctcggctcactgtgacctcctcctctcaggtttaagtgattctcctgcctcagcctccagagtagctgggattacaggcgcctaccaccatgcctgctaatttttgtattttagtagagacagggttttaccatgttgaccagactggtctcgaactcccgacctcaggt--------------gatctgcccacctcagcctcccagagtgttgggattacaggtgtgagcaaccatgcccggccA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103328141 264 - 106955855 tgtcgcccaggctagagtagaatggcacagtctcggctcactgcgacctcctcctcccgggtttaagtgattctcctgcctcagcctccagagtagctgggattacaggcgcctaccaccacgcccgctaatttttgtattttagtagagacggggtttcaccatgttgaccagactggtctcgaactaccgacctcaggt--------------gatctgcccacctcggcctcccaaagtgttgggattacaggtgtgagcaaccacgccgggccG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60627047 276 + 64156825 tgtcacccaggctagagtagaatgtcacggtctcggctcactgcaacctccgcctcccgggaaggagtggttctcctgcctcagcctcccaagcagctgggattacaggcgcctaccaccatgctcgctaatttttgtattttagtagagatggggcttcaccatgtgggccagactgatctcaaactcccgatctcaggtgatctgcccacctcgatctgcccacctcggcctccc--agtgttgggattacaggcgtgagcaaccatgcccagccA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55767644 276 + 59248254 tgtcacccaggctagagtagaatgtcacagtctcggctcactgcaacctccgcctcccgggaaggagtggttctcctgcctcagcctcccaagcagctgggattacaggcgcctaccaccatgctcgctaatttttgtattttagtagagatggggcttcaccatgtgggccagactgatctcaaactcccgatctcaggtgatctgcccacctcgatctgcccacctcggcctccc--agtgttgggattacaggcgtgagcaaccatgcccagccA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872865 276 + 51301725 tagcgcccaggctagagtagaatgtcacggtctcggctcactgcaacctccgcctcccgggagggagcgattctcctgcctcagcctcccaagcagctgggattacaggcgcctaccaccacgctcgctaatttttgtattttagtagagatggggcttcaccatgtgggccagactgatctcaaactcccgatctcaggtgatctgcccacctcgatctgcccacctcggcctccc--agtgttgggattacaggcgtgagccaccatgcccagccg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47581091 276 + 50890351 tgtcacccaggctagagtagaatggcatggtctcggctcactgcaacctctgcctcccgggagggagtgattctcttgcctcagcctcccaagcagctgggattacaggcgcctaccaccatgctcgctaatttttgtattttagtagagatggggcttcaccatgtgggccagactgatctcaaactcccaatctcgggtgatctgctcacctcgatctgcccacctcagcctccc--agtgttgggattacaggcgtgagcaaccatgcccagccG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56809187 756 + 60714840 I e calJac3.chr22 45935481 9 + 49145316 I a score=132655.000000 s hg38.chr19_GL949747v2_alt 618876 62 + 729520 AGGGTTTTTAACTTTAGCTGACCTCCGGAGGTTACAAGTTTGAAAACGGCAGGAGGAAACCC s panTro4.chr19 59887552 62 + 63644993 AGGGTTTTTAACTTTAGCTGACCTCCGGAGGTTACAAGTTTGAAAACGGCAGGAGGAAACCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103328405 59 - 106955855 AGGGTTTTTAACTCTAGCTGGCCTCCGGAGGTTACAAGTTTGAAAA---CAGGAGGAAACCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60627323 62 + 64156825 AGGGGTTTTACCTCTAGCTGGCCTCCGGATGTTACAAGTTTGAAAATAGAAGGAGGAAACCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55767920 62 + 59248254 AGGGTTTTTACCTCTAGCTGGCCTCCGGATGTTACAAGTTTGAAAATAGAAGGAGGAAACCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47873141 62 + 51301725 agggTTTTTACCTCTAGCTGGCCTCCGGAGTTTACAAGTTTGAAAATAGGAGAAGAAAACCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47581367 62 + 50890351 AGGGTTTTTACCTCTAGCTGGCCTCCAGAGGTTACAAGTTTGAAAATAGGAGGAGGAAACCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935490 62 + 49145316 AGGGTTTTTAAGTCTAGCTGGCCTCCAGAGGTCACAAATTGGAAAATAGCAGGAGAAAACCC i calJac3.chr22 I 9 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56809187 756 + 60714840 I a score=2305838.000000 s hg38.chr19_GL949747v2_alt 618938 872 + 729520 AGAGAGTTGTAAACTTACGAAGGTCTGGGCTC-TGAAAAAGATACAAATTTTCTTTCCATGCCAATAGCGCTCACACAGACATGGTGAATGTTCCTGAAACCCGCCGGACTTTCTGTAAGAAGTGTGGCAAGCACCACCCCCACAAAGTGACAC---------AAGGCAAGGATTCTTGGTATGCCCAGGGGAAGTAGTGTTATGACAGGAAGCAGAGTGGCTATGGTGGGCAGACTAAGCCGATTTTCCGGAAAAA-GGCT-AAAACTACAAAGAAGATTGTGCTAAGGC---TTGAGTGCCTTGAGCCCAACTGCAGATCTA--AGAATGCTGGCTATTAAAAGATACAAGCAgccaagcgcggtggctcacgcctgtaatcccaacactttgggaggccgaggtgg--gcggatcacaaggtcaggagtctgagaccagcctggccaaaatggtgaaaccccatctctactaaaaatacaaaacttagctgggca-tggtggtgtatgcctatagtcccagctactcaggaagctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccaagattgtgc-----cactccagcctgggcaacagagtgacactctgtctc--------------aaaaaaaaaa------GATGCAAGCATTTTGAACTGGAAGGAGAT---AAGAGAAAGGAACAAGTGATCCAGTTCTAAGTGTCATCTT---TTCTTTTATGAAGGCAATAAAATCTTGAGCTTATGGTAAA-ATG-CAAAATTTT-------CCCCCCTTCTCCTTTTTCAGAAGCAGCTTTGAAATCCTTTAATAAAA-GGAAGCCTCTATCATTAGGTAAGTTACCTCATTTATAACTTTTATTCTTCATG-TGAGA-TCTGGGGA-CTCGGGCCTTTGTTTT---- s panTro4.chr19 59887614 880 + 63644993 AGAGAGTTGTAAACTTACGAAGGTCTGGGCTC-TGAAAAAGATGCAAATTGTCTTTCCATGCCAATAGCGCTCACACGGACATGGTGAATGTTCCTGAAACCCGCCGGACTTTCTGTAAGAAGTGTGGCAAGCACCACCCCCACAAAGTGAAAC---------AAGGCAAGGATTCTTGGTATGCCCAGGGGAAGCAGTGTCATGACAGGAAGCAGAGTGGCTATGGTGGGCAGACTAAGCCGATTTTCCGGAAAAAAGGCT-AAAACTACAAAGAAGATTGTGCTAAGGC---TTGAGTGCCTTGAGCCCAACTGCAGATCTA--AGAATGCTGGCTATTAAAAGATACAAGCAgctgagcgcggtggctcacgcctgtaatcccaacactttgggaggccgaggtgg--gcggatcacaaggttaggagtctgagaccagcctggccaaaatggtgaaaccccatctctactaaaaatacaaaacttagccaggca-tggtggtgtatgcctgtagtcccagctactcaggaagctgaggcaggagaatcgcttgaacgtgggaggcagaggttgcagtgagccaagattgtgc-----cactccagcctgggcaatagattgacactctgtctc--------------aaaaaaaaaaaaaaaagaTGCAAGCATTTTGAACTGGAAGGAGAT---AAGAGAAAGGAACAAGTGATCCAGTTCTAAGTGTCATCTT---TTTTTTTATGAAGGCAATAAAATCTTGAGCTTATGGTAAA-ATG-CAAAATTTT------TCCCCCCTTCTCCTTTTTCAGAAGCAGCCTTGAAATCGTTTAATAAAA-GGAAGCCTCTATCATTAGGTAAGTTACCTCATTTATAACTTTTATTCTTCATG-TGAGA-TCTGGGGA-CTCGGGCCTTTGTTTT---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809943 874 + 60714840 AGAGAGTTGTAAACTTACGAGGGTCTGGGCTCTTAAAAAAAATGCAAATTTTCTTTCCATGCCGATAGCGCTCACACAAACATGGTGAATGTTCCTAAAACCCGCCGGACTTTCTGTAAGAAGTGTGGCAAGCACCAGCCCCACAAAGTGACAC---------AGGGCAAGGATTCTTGGTATGCCCAGGGGAAGCAGTGTTATGACAGGAAGCAGAGTGGCTATGGTGGGCAGACTAAGCCGATTTTCCAGAAAAA-GGCT-AAAACTACAAAGAAGATTGTGCTGAGGC---TTGAGTGCCTTGAGCCCAACTGCAGATCTA--AGAATGCTGCCTATTAAAAGATACAAGCagccgagcgcggtggctcacgcctgtaatcccaacactttgggaggccgaggtgg--gcggatcacaaggtcaggagtttgagaccagcctggccaaaatggtgaaaccccatctctactaaaaatacaaaacttagccaggca-tggtggtgtatgcctgtagtcccagctactcaggaagctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccaagatcgtgc-----cactccagcctgggcaacagagtgacactctgtctc--------------aaaa------------GATGCAAGCATTTTGAACTGGAAGGAGAT---AAGAGAAAGGAACAAGTGATCCAGTTCTAAGTGTCATCTT---TTCTTTTATGAAGGCAATAAAATCTTGACCTTATGTTAAA-ATGCCAAAATTTTT-----TCCCCCCTTCTCCTTTTTCAGAAGCAGCTTTGAAATCGTTAAATAAAAGGGAAGCCTCTATCATTAGGTAAGTTACCTCATTTATAACTTTTATTCTTCATGCTGAGATTCTGGGGATCTCGGGCCTTTGTTTT---- i ponAbe2.chr19 I 756 C 0 s nomLeu3.chr10 103328464 873 - 106955855 AGAGAGTTGTAAACTTACGAGGGTCTGGGCTC-TGAAAAAGATGCAAATTTTCTTTCCATGCCGATAGCGCTCACACAAACATGGTGAATGTTCCTAAAACCCGCCAGACTTTCTGTAAGAAGTGTGGCAAGCACCACCCCCACAAAGTGACAC---------AGGGCAAGGATTCTTGGTATGCCCAGGGGAAGCAGTGTTATGACAGGAAGCAGAGTGGCTATGGTGGGCAGACTAAGCCGATTTTTCGGAAAAA-AGCTAAAAACTACAAAGAAGATTGTGCTAAGGCTCATTGAGTGCCTTGAGCCCAACTGCAGATCTA--AGAATGCTGGCTATTAAAAGATACAAGCAgccgagcgtggtggcttacgcctgtaatcccaacactttgggaggccaaggtgggcgcggatcacaaggtcaggagtttgagaccagcctggccaaaatggtgaaaccctatctctactaaaaatacaaaacttagccgggcattggtggtgtatgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcagaggtagcagtgagccaagatcgagc-----cactccagcctgggtgacagagtgacactctgtctc--------------aaaaaaaaaaaa----GATGCAAGCATTTTGAACTGGAAGGAGGT---AAGAGAAAGGAACAAGTGATCCAGTTCTAAGTGTCATC--------TTTTATGAAGGCAATAAAATCTTGAGCTTATGTT-AA-ATG-CAAAATTTT------TCCCCCCTT---CTTTTTCAGAAGCAGCTTTGAAATCGTTTAATAAAA-ACAAGCCTCTATCATTAGGTAAGTTACCTCATTTACAACTTTTATTCTTCATG-TGAGA-TCTGGGGA-CTTGGGCCTTTGTTTT---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60627385 858 + 64156825 AGAGAGTTGTAAACTTACGAGGGTCTGGGCTC-TGAAAAAGATGCAGAGTTTCTTTCTGTGCCGATCGCGCTCACACAAACATGGTGAATGTTCCTAAAACCCACCGGACTTTCTGTAAGAGGTGTGGCAAGCACCATCCCCACAGAGTGACAC---------AGGGCAAGGCTT-TTGGTGTGCCCAGGGGAAGCAGTGTTACGCCAGGAAGCAGAGTGACTACGGTGGGCAGACTAAGCCAATCTTCTGGAAAAA-GGCT-AAAACTACAAAGAAGATTGTGCTAAGGC---TTGAGTGCGTTGATCCTATCTGCAGATCTA--AGGATGCTGGC---TAAAAGATACAAGCggccgggagcggtggctcatgcctgtaatcccagcattttgggaggccaaggtag--acggatcatgatgtcaggagtttgagaccagcctggccaaaatggtgaaaccccatctgtactaaaaatataaaacttagccaggca-tggtggtgcgtgcctgtagtcccagctactcaggaggctgaggcagcagaatcacttgaacctgggagacggaggttgcagtgagccaagatcttgc-----cactccagcctgggtgacagagtgaga--ctatctc---------------aaaaaaaaaaaaaaaGCTGCAAGCATTTTGAACT--GAGGATAT--------AAAAGACCAAGTGATCCAGTTCTAAGTGTTGTC--------TTTTATGAAGGTGATAAAATCTTGAGTTTATATTAAA-ATG-CAAATCTC-------CCCTCCGTTTTCCTTTTTCAGAAGCAGCTTTGAAATCATTTAATAAAC-ACAAGCCTTTATCATTAGGTAAGTTA-CTCATTTATAACTTTTATTCTTCATG-TGAGA-TTTGAGGA-CTTGGGGCTTTGTTTT---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55767982 861 + 59248254 AGAGAGTTGTAAACTTACGAGGGTCTGGGCTC-TGAAAAAGATGCAGAGTTTCTTTCTGTGCCGATCGCGCTCACACAAACATGGTGAATGTTCCTAAAACCCACCGGACTTTCTGTAAGAGGTGTGGCAAGCACCATCCCCACAGAGTGACAC---------AGGGCAAGGCTT-TTGGTGTGCCCAGGGGAAGCAGTGTTACGCCAGGAAGCAGAGTGACTACGGTGGGCAGACTAAGCCAATCTTCTGGAAAAA-GGCT-AAAACTACAAAGAAGATTGTGCTAAGGC---TTGAGTGCGTTGATCCTATCTGCAGATCTA--AGGATGCTGGC---TAAAAGATACAAGCAgccgggagcggtggctcatgcctgtaatcccagcattttgggaggccaaggtag--acggatcatgatgtcaggagtttgagaccagcctggccaaaatggtgaaaccccatctgtactaaaaatataaaacttagccaggca-tggtggtgtgtgcctgtagtcccagctactcaggaggctgaggcagcagaatcacttgaacctgggagacggaggttgcagtgagccaagatcttgc-----cactctagcctgggtgacagagtgaga--ctatctc--------------aaaaaaaaaaaaaaaaGCTGCAAGCATTTTGAACTGGGAGGATAT--------AAAAGACCAAGTGATCCAGTTCTAAGTGTTGTC--------TTTTATGAAGGTGATAAAATCTTGAGTTTATATTAAA-ATG-CAAATCTC-------CCCCCCGTTTTCCTTTTTCAGAAGCAGCTTTGAAATCATTTAATAAAA-ACAAGCCTTTATCATTAGGTAAGTTA-CTCATTTATGACTTTTATTCTTCATG-TGAGA-TTTGAGGA-CTTGGGGCTTTGTTTT---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47873203 880 + 51301725 AGAGAGTTGTAAACTTAAGAGGGTCGGGGCTC-TGAAAAAGATGCAGAGTTTCTTTCTGTGCCGATCGCGCTCACACAAACATGGTGAATGTTCCTAAAACCCGCCAGACTTTCTGT--GAGGTGTGGCAAGCACCATCCCCACAGAGTGACAC---------AGGGCAAGGATT-TTGGTGTGCCTAGGGGAAGCAGTGTTATGGCAGGAAGCAGAGTGATTATGGTGGGCAGACTAAGCCAATTTTCTGGAAAAA-ggct-aaaactacaaagaagattGTGCTAAGGC---TCGAGTGCGTTGAGCCTATCTGCAGATCTA--AGGATGCTGGC---TAAAAGATACAAgcggccaggagcggtggctcatgcctgtaatcccagcactttgggaggccaaggtag--acggatcatgatgtcaggagtttgagaccagcctggccaaaatggtgaaaccccatctgtactaaaaatataaaacttagccaggca-tggtggtgcgtgcctgtagtcccagctactcaggaggctgaggcagcagaatcgcttgaacctgggagacagaggttgcagtaagccaagatcttgc-----cactccagcctgggtgacagagtgaga--ctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagatgcaagcaTTTTGAACTGGGAGGATAT--------AAAAGACCAAGTGATCCAGTTCTAAGTGTTGTC--------TTTTATGAAGGTGATAAAATCTTGAgtttatattaaa-atg-caaatctcccccccaccccccgttTTCCTTTTTCAGAGGCAGCTTTGaaatcatttaataaaa-acaagCCTTTATCATTAGGTAAGTTA-CTCATTTACGACTTTTATTCTTCATG-TGAGA-TTTGGGGA-CTTGGGGGTTTGTTTT---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47581429 855 + 50890351 AGAGAGTTGGAAACTTACGAGGGTCTGGGCTC-TGAAAAAGATGCAGAGTTTCTTTCTGTGCCGATCGCGCTCACACAAACGTGGTGAATGTTCCTAAACCCCGCCGGACTTTCTGTAAGAAGTGTGGCAAGCGCCATCCCCACAGAGTGACAC---------AGGGCAAGGATT-TTGGTATGCCCAGGGGAAGCAGTGTTAGGGCAGGAAGCAGAGTGACTACGGTGGGCAGACTAAGCCAGTTTTCTGGAAAAA-GGCT-AAAACTACA---AAGATTGTGCTAAGGC---TC--GTGCGTTGAGCCTATCTGCAGATCTA--AGGATGCTGGC---TAAAAGATACAAGCggccaggcgcagtggctcacgcctgtaatcctagcactttgggaggccgaggtgg--acggatcacgaggtcaggagtttgagaccagcctggccaaaacggtgaaaccccatctgtactaaaaatacaaaacttagccacgca-tggtggtgcatgcctgtagtcccagctactcaggaggctgaggcagcagaatcgcttgaacctgggagacggaggttgcagtgagccaagatcttgc-----cactctagcctgggtgaca----gaga--ctgtctc--------------aaaaaaaaaaaaaaaaGATGCAAGCATTTTAAAATGGGAGGAGAT--------AAAAGACCAAGTGATCCAGTTCTAAGTGTTGTC--------TTTTATGAAGGCAATAAAATCTTGAGTTTATATTAAA-ATG-CAAATCCCCCC----CCCCCCATTTTCCTTTTTCAGAAGCAGCTTTGAAATCATTTAATAAAA-ACAAGCCTTTATCATTAGGTAAGTTA-CTCATTTACGACTTTTATTCTTCATG-TGAGA-TTTGGGGA-GTTGGGGCTTTGTTTT---- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935552 906 + 49145316 AGAGAGTCGTACACTTACGAGGGGCTGGGCTC-TTAAAAAGATGCAGATTTTCTTTCCGGGCCAATAGTGCCCATGCAAACACAGTGAATGTTCCCAAAAGCCACCAGACTTTCTGTAAGAAGTGTGGCAAGCAGCAATCCCACGAAATGGCACAGTACGAGAAGGGCAGGGATTCTC--TATGCCCAGGGAAAGCGGTGTTACGACAGACAGCAGAGTGGCTATAGTGGGCAGCGTACGCCGATTTTCCGAAAAAA-GGCT-AAAAATACA---AAGACTGTGCTAAGGT---TTGGCTGCGTGGAGCCCCACTGCAGATCTAAGAGAATGCTGGCTGTTAAAAGATGCAAGCggccgggcgcggtggctcacgcctgtaatcccagcactttaggaggccgaggcgg--gtggatcgcgaggtcaggagttcaagaccagcctggccaagatgttgaaaccccgtctctactaaaaatacaaaaattagctgggcg-cggtggcatgtgcccgtaatcctacctactcaggaggctgaggcaggagaattgcctgaacctgggaggtggaggttacagtgagctgagattgtgccattgcactccagcctgggtgactgagtaagactcggtctc-------aaaaaaaaaaaaaaaaaaaaaaagaTGCAAGCATTTTCAACTGGGAGCAGGTAAGAAGAGAAAGGGCCAAGTGATCCAGTTCTGAGTGTCATCTTTTATTTTATTATGAAGACAATAAAATCTTGCGTTTCTTTTAAACATG-TAAATTT--------CTCCCCCTTTTTCTTTTTCAGAAGCAGCTTTGAGATCATTTAATAAAA-ACAAGCCTCTACCATTAGGTAAATTACCTCATTGACAACTATTATTCTTCATG-TGAGG-TTTGGGGA-CTGAGGGCTGCTtttttttt i calJac3.chr22 C 0 I 2503 e canFam3.chr1 20041887 933 - 122678785 I a score=49894.000000 s hg38.chr19_GL949747v2_alt 619810 29 + 729520 AAGGAGAATG--TGCTGAGCACTAAGAATGC s panTro4.chr19 59888494 29 + 63644993 AAGGAGAATG--TGCTGAGCACTAAGAATGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56810817 29 + 60714840 AAGGAGAATG--TGCCGAGCACTAAGAATGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103329337 29 - 106955855 AAGGAGAATG--TGCTGAGCACTAAGAATGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60628243 29 + 64156825 AAGAAGAGGC--TGCTGACTACTAAGAATGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55768843 29 + 59248254 AAGAAGAGGC--TGCTGACTACTAAGAATGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47874083 31 + 51301725 AAGAAGAGACTGTGCTGACTACTAAGAATGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47582284 31 + 50890351 AAGAAGAGACAGTGCTGTCTACTAAGAATGT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45936458 2503 + 49145316 I a score=864378.000000 s hg38.chr19_GL949747v2_alt 619839 302 + 729520 AAAGAAATGCCGGACTTAGCATCCCTGCTCCCAGGGCGGAGCTGGTCTCGCAGGTGCGTAGCAGTAAGACCTGGGAAGCTGAAACACGATCGCGTTTGTTGGAAATCTATAAATACATACAAAGCGGGGAAGGGTAAGCTTGGCCTTTGAATCTGGATAAGGTAGAGAC-ttttcttttttgagatggaggcttgctctgtcacctaggctgaagtgcagtggtacgacctcggctgactgcaacctctacctcctgggttcaagcagttctcctgcctcagcctctagaatagctgggatta s panTro4.chr19 59888523 302 + 63644993 AAAGAAATGCCGGACTTAGCATCCCTGCTCCCAGGGCGGAGCTGGTCACACAGGTGCGTAGCAGTAAGACCTGGGAAGCTGAAACACGATCGCGTTTGTTGGAAATCTATAAATACATACAAAGCGGGGAAGGGTAAGCTTGGCCTTTGAATCTGGATAAGCTAGAGAC-ttttcttttttgagatggaggcttgctctgtcacctaggctgaagtgcagtggtacgacctcggctgactgcaacttccacctcctgggttcaagcagttctcctgcctcagccttgggaatagctgggatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56810846 301 + 60714840 AAAGAAATGCCGGACTTCGCATCCCTTCTCCCAGGGCGGACCTGGTCACGCAGGTGCATAGCAGTAAGACCTGGGAAGCTGAAACACGATAGCGTTTGTTGAAAATCTATAAATACATACAAAGCGGGGAAGGGTAAGCTTGGCCTTTGAATCTGGATAAGCTAGAGAC--tttcttttttgagatggaggcttgctctgtcacctaggctgaagtgcagtggtacgacctcggctgactgcaacctccacctcccgggttcaagcagttctcctgcctcagcctctggagtagctgggatta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103329366 302 - 106955855 AAAGAAGTGCCGGACTTCGCACCCCTGCTTCCAGGGCGGAGCTGGTCATGCAGGTGCATAGCAGTAAGACCTGGGAAGCTGAAACACGATAGCGTTTGTTGGAAATCTATAAATACATACAAAGCAGGGAAGGGTAAGCTTGGCCTTTGAATCTGGATAAGCTAGAGAC-TTTGGttttttgagatggaggcttgctctgtcgcctaggctgaagtgcagtgatatgacctcggctgactgcaacctccacctcccgggttcaagcagttctcctgcttcagcctctggagtagctgggatta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60628272 300 + 64156825 AAAGAAATGCCGGACTTCTCATCCCTGCTCCCAGGACGGAGCCGGTCACACAGGTGGGTAGCAGTAAGCCCTGGGAAGCTGAAACACGATAGCATTTGTTGGAAATCTATAAATACATACAAAGTGGGGAAGGGTAAGCTTGGCCTTTGAAAGTGGATAAGCTAGAGAC---ttcttttttgagatggagccttgctctgtcgcctaggctggagtgcagtggcacaatctcagctgactgcaacctccgcctcccggcttcaagcaattctcctgcctcagcctctggagtagctgggatta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55768872 300 + 59248254 AAAGAAATGCCGGACTTCTCATCCCTGCTCCCAGGACGGAGCCGGTCACACAGGTGGGTAGCAGTAAGCCCTGGGAAGCTGAAACACGATAGCATTTGTTGGAAATCTATAAATACATACAAAGTGGGGAAGGGTAAGCTTGGCCTTTGAAAGTGGATAAGCTAGAGAC---ttcttttttgagatggagccttgctctgtcgcctaggctggagtgcagtggcacaatctcagctgactgcaacctccgcctcccagcttcaagcaattctcctgcctcagcctctggagtagctgggatta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47874114 302 + 51301725 AAAGAAATGCCGGACTTCTCATCCCTGCTCCCAGGACGGAGCCGGTCACACAGGTGGGTAGCAGTAAGCCCTGGGAAGCTGAAACACGGTAGCATTTGTTGGAaatctataaatacatacaaagtgGGGAAGGGTAAGCTTGGCCTTTGAAACTGGATAAGCtagagac-ttttcttttttgagatggagtcttgctctgtcgcctaggctggagtgcagtggcacaatctcagctcactgcaacctccgcctcccgggttcaagcaattctcctgcctcagcctctggagtagctgggatta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47582315 302 + 50890351 AAAGAAATGCCGGACTTCTCATCCCTGCTCCCAGGATGGAGCCGGTCACACAGGTGGGTAGCAGTAAGCCCTGGGAAGCTGAAACACGATAGTATTTGTTGGAAATCTATAAATACATACAAAGTGGGGAAGGGTAAGCTTGGCCTTTGAAACTGGATAAGCTAGAGAC-ttttcttttttgagatggagtcttgctctgtcacctaggctaaagtgcagtggcacaatctcggctcactgcaacctccgcctcccgggttcaagcagttctcctgcctcagcctctggagtagctgggatta i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45938961 303 + 49145316 aaagaaaTCCCAGCGTTCTCATCCCTGCTCCCAGGGAGGAGCTGGTTATGCAGGTGGAGAGCAGTAAGACCTGGGAAGCTGAAACACGATAGTATTTGTTGGAAACTGGTACATACATACCCAGTAGGGAAGGATAAGCTTGGCCTTTCAATATGGATAAGCTAGAGACtttttcttttttgagatggagtctggctctgttgcctaggctggagtgcagtggtgcaatcatggttcactgcagccttgacctcccaggctcaggtgatcctcctgcctcagcctcccaaagtgctggggtca i calJac3.chr22 I 2503 I 1 e canFam3.chr1 20041887 933 - 122678785 I a score=301963.000000 s hg38.chr19_GL949747v2_alt 620141 136 + 729520 caggtacctgccaccaggcccggctaattttttgtggtgtt----------tgtagagatggggtttcaccatgatggccaggctggtcttgaactcctgacctcaagtgatctgcccacctcagcgtcccaaaatgctgggatta s panTro4.chr19 59888825 135 + 63644993 caggtgcctgccaccaggcccggctaattttttgtggtttt----------tgtagagatggggtttcaccatgatggccaggctggtcttgaactc-tgacttcaagtgatctgcccacctcagcgtcccaaaatgctgggatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56811147 136 + 60714840 caggtgcctgccaccaggcccggctaattttttgtggtttt----------tgtagagatggggtttcaccatgttggccaggctggtcttgaactcctgacctcaagtgatctgcccacctcagtgtcccaaaatgctgggatta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103329668 134 - 106955855 cgggtgccggtcaccaggcctggctaattttttgtggtttt----------tgtagagatggggtttcaccatgttggccaggctggtcttgaactcctgacctcaagtgatctgccca-ctcagtgtccc-aaatgctgagatta i nomLeu3.chr10 C 0 T 64436 s rheMac3.chr19 60628572 146 + 64156825 caggcacccaccaccaggcctggctagatttttgtggtttttatagagatgtatagagatggggtttcactatgttggccgggctggtcttgaactcctgacctcaagtgatctgcccacctcagcctcccaaagtgctggaattg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55769172 146 + 59248254 caggcacccaccaccaggcctggctagatttttgtggtttttatagagatgtatagagatggggtttcactatgttggccgggctggtcttgaactcctgacctcaagtgatctgcccacctcagcctcccaaagtgctggaattg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47874416 136 + 51301725 caggcacccaccaccaggcctggctagatttttgtggtttt----------tatagagatggggtttcactatgttggccaggctggtcttgaactcctaacctcaagtgatctgcccacctcagcctcccaaagtgctggaattg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47582617 136 + 50890351 caggcacccaccaccaggcctggctagatttttgtggtttt----------tatagagatgaggtttcactatgttggccaggctggtcttgaactcctaacctcaagtgatctgcccacctcagcctcccaaaatgttggaattg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45939264 1 + 49145316 I a score=334363.000000 s hg38.chr19_GL949747v2_alt 620277 237 + 729520 tgggc----atgagccaccacCACACCCGGttttgttttttttttttttttttttttt-----------ttttttttttttttgaaacagggcttcactctgtcacttaggctggagtg-----gtgcaatcatggttcactgcagccttgacctcccaagctctggtgatcctcctgcctcagcctcctgagtagctgggaccacaggcacttgccaccatgcctggctaatttttttcactttttgtagagacag s panTro4.chr19 59888960 224 + 63644993 taggc----atgagcaaccaccacacccggcttt------------------tttttt-----------ttttttttttttttgaaacagggcttcactctgtcacttaggctggagtgcagtggtacaatcatggttcactgcagccttgacctcccaagctctggttatcctcctgcctcagcctcctgagtagctgggaccacaggcacttgccaccatgcctggctaatttttttcactttttgtagagacag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56811283 221 + 60714840 taggc----gtgagtcaccCCCACACCTGAC---------------------tttttt-----------ttgttttgttttttgaaacagggcttcactctgtcacttaggctggagtgcagtggtgcaatcatggctcactgcagccttgacctcccaggctctggtgatcctcctgcctcagcctcctgagtagctgggaccacaggcacctgccatcacgcctggctaatttttttcactttttgtagagacag i ponAbe2.chr19 C 0 T 90216 s rheMac3.chr19 60628718 213 + 64156825 taggtgtgagtgagtta---ccacacctggc---------------------ttttct-------------------gtttttgaaacgggacttcactctgtcacttaggctggagtgcagtggtgcaatcatggctcactgcagccctgaccacccaggcttaggcaatcctcctgcctcagcctcctgagtagctgggaccacaggcacttgccacccctcctggctaa-ttttttcactttttgtagagacag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55769318 212 + 59248254 taggtgtgagTGAGTTA---CCACACCTGGC---------------------tttttt--------------------tttttgaaacgggacttcactctgtcacttaggctggagtgcagtggtgcaatcatggctcactgcagccctgaccacccaggcttaggcaatcctcctgcctcagcctcctgagtagctgggaccacaggcacttgccaccccacctggctaa-ttttttcactttttgtagagacag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47874552 211 + 51301725 caggc----gtgagtca---ccacacctggc---------------------cttttt-----------------ttttttttgaaacaggactttgctctgtcacttaggctggagtgcagtggtgcaatcacggctcactgcagccttgaccacccaggcttaggcgatcctcctgcctcagcctcctgagtagctgggaccacaggcacttgccaccccgcctggctaa-ttttttcactttttgtagaaacag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47582753 229 + 50890351 caggg----atgagtca---ccacacctggT---------------------TGtttttttttttttttttttttttttttttgaaacaggacttcgctctgtcacttaggctggagtgcagtggtgcaatcatggctcactgcagccttgaccacccaggcttaagcgatcctcctgcctcagcctcctgagtagctgggaccacaggcacttgccacctggcctggctaatttttttcactttttgtagagacag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45939264 1 + 49145316 I e nomLeu3.chr10 103329802 64436 - 106955855 T a score=111518.000000 s hg38.chr19_GL949747v2_alt 620514 85 + 729520 ggtcttgctatgttgcccaggctggcctcgaattactaaactcaatcagtcctcctgcctcaccctcccaaactgctggggtaca s panTro4.chr19 59889184 85 + 63644993 ggtcttgctatgttgcccaggctggtctcgaattactaaactcaatcagtcctcccgcctcaccctcccaaactgctggggtatg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60628931 85 + 64156825 ggtcttgctatgttgcccaggctggtcttgaattactaaacttaatcagtcctcccaccttatcctcccaaagtgctggggtaca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55769530 85 + 59248254 ggtcttgctatgttgcccaggctggtctcgaattactaaacttaatcagtcctcccaccttatcctcccaaagtgctggggtaca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47874763 85 + 51301725 ggtcttgctatgttgtccaggctggtctcgaattactaagctcaatcagtcctcccacctcatcctcccaaagtgctggggtaca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47582982 85 + 50890351 ggtcttgctatgttgcccaggctggtctcgaattactaaacttaatcagtcctcccacctcatcctcccaaagtgctggggtaca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e calJac3.chr22 45939264 1 + 49145316 I e nomLeu3.chr10 103329802 64436 - 106955855 T a score=93204.000000 s hg38.chr19_GL949747v2_alt 620599 49 + 729520 ggtgtgagccatgacacctggccCTTACCAGCTACTTATATCCTGAAGA s panTro4.chr19 59889269 49 + 63644993 ggtgtgagccatgacacctggccCTTACCAGCTACTTATATCCTGAAGA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60629016 49 + 64156825 ggtgtgagccatgacacctggccCTTACCAGCTATTTATATCCTGAAGA i rheMac3.chr19 C 0 I 2 s macFas5.chr19 55769615 49 + 59248254 ggtgtgagccatgacacctggccCTTACCAGCTATTTATATCCTGAAGA i macFas5.chr19 C 0 I 337 s papAnu2.chr19 47874848 49 + 51301725 ggtgtgagccatgacacCTGGCCCTTACCAGCTACTTATatcctgaaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47583067 49 + 50890351 ggtgtgagccatgacccctggcTCTTACCAGCTATTTACATCCTGAAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45939265 49 + 49145316 ggtgtgagccatgacacctggcCCTTACCAACTATTTATATCCTGAAGA i calJac3.chr22 I 1 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e nomLeu3.chr10 103329802 64436 - 106955855 T a score=1336.000000 s hg38.chr19_GL949747v2_alt 620648 2 + 729520 tt s panTro4.chr19 59889318 2 + 63644993 tt i panTro4.chr19 C 0 C 0 s macFas5.chr19 55770001 2 + 59248254 tt i macFas5.chr19 I 337 I 4 s chlSab2.chr6 47583116 2 + 50890351 tt i chlSab2.chr6 C 0 I 4 s calJac3.chr22 45939314 1 + 49145316 -t i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e nomLeu3.chr10 103329802 64436 - 106955855 T e papAnu2.chr19 47874897 0 + 51301725 C e rheMac3.chr19 60629065 2 + 64156825 I a score=16526.000000 s hg38.chr19_GL949747v2_alt 620650 27 + 729520 attattattttttttttttttgagata s panTro4.chr19 59889320 25 + 63644993 tttttt--tttttttttttttgagata i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60629067 25 + 64156825 tttttt--ttttttttttttggagacg i rheMac3.chr19 I 2 C 0 s macFas5.chr19 55770007 25 + 59248254 tttatt--tttttttttttttgagacg i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47874897 18 + 51301725 ---------ttttttttttttgagata i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45939315 20 + 49145316 -------ttttgtttgtttttgagaca i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e nomLeu3.chr10 103329802 64436 - 106955855 T e chlSab2.chr6 47583118 4 + 50890351 I a score=98946.000000 s hg38.chr19_GL949747v2_alt 620677 169 + 729520 gagtctctct------ctgttgcccaggctggagtgcagtggcgtgatctcggctcactgcaagctccgcctcccgggttcatgccattctcctgcctcagcctcccgagt-agctgggactacaggcgcccaccaccacgcctggctaattttttt-gtgtttttagtagagacgg s panTro4.chr19 59889345 170 + 63644993 gagtctcaat------ctgtcacccaggctggagtgcagtggcgcgatcccggctcactgcaagctccgcctcccgggttcacgtcattctcctgcctcagcctcccgagt-agctgggactacaggcgcccaccaccacgcccggctaattttttttgtgtttttagtagagacgg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60629092 168 + 64156825 gagtctcgct------ctgtagcccaggctgcagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcacgccattctccggcctcagcctccggagt-agctgggactacaggcgcctgccacctcacccggctattttttgt-at-ttcttagtagagacgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55770032 173 + 59248254 gagtctcgctctgtcactgtagcccaggctgcagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcacgccattctccggcctcagcctccggagt-agctgggactacagg-ggctgccacctcgcccagctattttttgt-at-ttcttagtagagacgg i macFas5.chr19 C 0 C 0 s calJac3.chr22 45939335 167 + 49145316 gggtcttgct------ctgttgccctggcttgattgcggtggcaagatcatagttcattacagcctcaaccttccaggctccggtgatcatccgacctcagcctccctttcgaactgggact-cagttgtgcactgccatacctgactaatatttgt-a--tttttggtagagacag i calJac3.chr22 C 0 I 715 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e nomLeu3.chr10 103329802 64436 - 106955855 T e chlSab2.chr6 47583118 4 + 50890351 I e papAnu2.chr19 47874915 0 + 51301725 C a score=53878.000000 s hg38.chr19_GL949747v2_alt 620846 120 + 729520 ggtttcaccgtgttagccaggatggtctcgatctcctgaccttgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccCCTGAAGA----TTGTG---- s panTro4.chr19 59889515 120 + 63644993 ggtttcaccatgttagccaggatggtctcgatctcctgaccttgtgatccacccgcctcggcctcccagagtgctgggattacaggcgtgagccaccgcgcccagccCCTGAAGA----TTGTG---- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60629260 122 + 64156825 ggtttcaccgtgttacccaggatggtctcgatctcctgacctcgtgatccgcccgtctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggcT------GAttttttttttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55770205 118 + 59248254 ggtttcaccgtgttacccaggatggtctcgatctcctgacctcgtgatccgcccatctcggcctcctaaagtgctgggattacaggcttgagccaccgcgcccggcc------GA----ttttttttt i macFas5.chr19 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e calJac3.chr22 45939502 715 + 49145316 I e nomLeu3.chr10 103329802 64436 - 106955855 T e chlSab2.chr6 47583118 4 + 50890351 I e papAnu2.chr19 47874915 0 + 51301725 C a score=9370.000000 s hg38.chr19_GL949747v2_alt 620966 10 + 729520 ttttgagatg s panTro4.chr19 59889635 10 + 63644993 ttttgagatg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60629382 10 + 64156825 ttttgagatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55770323 10 + 59248254 ttttgagatg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47583122 10 + 50890351 ttttgagatg i chlSab2.chr6 I 4 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e calJac3.chr22 45939502 715 + 49145316 I e nomLeu3.chr10 103329802 64436 - 106955855 T e papAnu2.chr19 47874915 0 + 51301725 C a score=368992.000000 s hg38.chr19_GL949747v2_alt 620976 292 + 729520 gggtcttgctgtgttgctccggcttgattgcagtggcacagtcatagctcattgcagcctcaaccttccaggctccagagatcctcttacctcagcctcctgagtagctgggactacaggtgtgcactgccacacctgactaatatttgtatttttggtagggacagtttcactatgttgccagatatggtgtcaaactcctggtctcaagtgatcctcccaccttggcctcccaaagtgctgggattacagacatgattcaccacacctggccATGAAGAC-----------------------------tttttttttt s panTro4.chr19 59889645 283 + 63644993 gggtcttgctatgttgctccggcttgattgcagtggtgcagtcatagctcattgcagcctcaaccttccaggctccagagatcctcttacctcagcctcctgagtagctgggactacaggtgtgcactgccacacctgactaatatttgtatttttggtagggacagtttcactatgttg---------gtgtcaaactcctggtctcaagtgatcctcccaccttggcctcccaaagtgctgggattacagacatgattcaccacacctggccATGAAGAC-----------------------------tttttttttt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60629392 292 + 64156825 ggttcttgctctgttgccctggcttgattgcggtggcacaatcatagctcattgcagcctcaaccttccaggcttcagagatccttttacctcagactcctgagtagctggaactacaggtgtgccctgccacacctgactaatatttgtatttttggtggggacagtttcactgtgttgccagatacggtgtcaaactcctggtgtcaagtgatcctcccaccttggcctcccagagtgctggggttacagacatgattcaccacacctggccATGAAGAC-----------------------------tttttatttt i rheMac3.chr19 C 0 T 77969 s macFas5.chr19 55770333 292 + 59248254 ggttcttgctctgttgccctggcttgattgcggtggcacaatcatagctcattgcatcctcaaccttccaggcttcagagatccttttacctcagactcctgagtagctggaactacaggtgtgccctgccacacctgactaatatttgtatttttggtggggacagtttcactgtgttgccagatacggtgtcaaactcctggtctcaagtgatcctcccaccttggcctcccagagtgctggggttacagacatgattcaccacacctggccATGAAGAC-----------------------------tttttatttt i macFas5.chr19 C 0 I 30 s papAnu2.chr19 47874915 317 + 51301725 ggatcttgctctgttgccctggcttgattgtggtggcacaatcatagctcattgcagcctcagccttccaggctccagagatcctcttacctcagcctcctgagtagctgggactacaggtgtgccctgccacacctgactaatatttgtatttttggtggggacagtttcactgtgttgccagatatggtgtcaaactcctggtctcaagtgatcctcccaccttggcctcccagagtgctggggttacagacatgattcaccacacctggccatgaagacttttattttt----ttagtattatttttatttttatttt i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 47583132 321 + 50890351 ggatcttgctctgttgccctggcttgattgcggtggcacaatcatagttcattgcagcctcaaccttccaggctccagagatcctcttacctcagactcctgagtagctggaactacaggtgtgctctgccacacccgactaatacgtgtatttttggtggggacagtttcactctgttgccagatacagtgtcaaactcttggtctcaagtgatcctcccaccttggcctcccagagtgctggggttacagacatgattcaccacacctggccATGAAGACtttttattttattattattattatttttatttttatttt i chlSab2.chr6 C 0 I 2 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e calJac3.chr22 45939502 715 + 49145316 I e nomLeu3.chr10 103329802 64436 - 106955855 T a score=218958.000000 s hg38.chr19_GL949747v2_alt 621268 299 + 729520 t-ggacaaagtctcactctgttgcccaggatggaatgcagtggcatgatctcagctcactgcaacctctgacctccgcctccc-ggttcaagtgattctcttgcctcagcctcccgagtagctgggattataggtgtctgccaccaagcccagctaatttttgtaattttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctgacctcgtgatccacgtgcctcagcctcccaaagtgttgggattacaggtgtgagtcactgcgcctggtcTCATGAAGACCtt s panTro4.chr19 59889928 300 + 63644993 ttggacaaagtctcactctgttgcccaggatggaatgcagtggcatgatctcagctcactgcaacctctgacctccgcctccc-agttcaagcgattctcttgcctcagcctcccgagtagctgggattacaggtgtctgccaccaagcccagctaatttttgtaattttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctgacctcgtgatccgcgtgcctcagcctcccaaagtgttgggattacgggtgtgagtcactgcgcctggtcTCATGAAGACCtt i panTro4.chr19 C 0 C 0 s macFas5.chr19 55770655 272 + 59248254 -ttgacaaagtcttactcttttgcccaggatggaattcagtggcatgatcttggctcactgtaac--ctgacctccgcctcccgggttcaagcgattctcttgccgcagcctccagagcagctgggattacaggcacccgccaccacacccagcta--------------------------atttcaccatgtttgtcaggctggtctcaaactcctgacctcgtgatccacctgcctcagcctcccaaagtgctgggattataggtgtgagccactgtgcccagccTCATGAAGACCtt i macFas5.chr19 I 30 C 0 s papAnu2.chr19 47875234 298 + 51301725 -ttgac--agtctcacgctgtcacccaggatggaatgcagtggcatgatcttggctcactgtaacctctgacctccgcctcccgggttcaaaagattctcttgCCATAGCCTccggagtagatgggattacaagcacccgccaccacgtctggctaatttttgtaattttagtagagacaggatttcaccatgttcgtcaggctagtctcgaactcctgacctcgtgatccacctgcctcagtctcccaaagtgctgggattataggtgtgagccactgtgcccggcctcgtGAAgacctt i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47583455 296 + 50890351 -ttgacaaagtct----cttttgcccaggatggaatgcagtggcatgatcttggctcactgtaacctctgacctccgcctcctgggttcaagcgattctcttgccgcagcctccggagtagctgggattacaggcacccaccaccacacccggctaatttttgtaattttagtagagacaggagttcaccatgttcgtcaggctggtcttgaactcctgacctcatgatccacctgcctcagcctcccaaagtgctgggattataggtgtgagccactgtgcccagccTCATGAAGACCtt i chlSab2.chr6 I 2 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e calJac3.chr22 45939502 715 + 49145316 I e nomLeu3.chr10 103329802 64436 - 106955855 T e rheMac3.chr19 60629684 77969 + 64156825 T a score=940392.000000 s hg38.chr19_GL949747v2_alt 621567 442 + 729520 ttttgagacagagtcttgctctgtcacccaggctggagtgcagtggtacaatct-------cactgcagcctccgcctcccaggttcaagtga-ttctcctgccttagcctcccaagtagctgggattacaggcgcctaccaccacgtctggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactgctgacctcaaatgaactgtctgcctcagcctcacaaagtactgggattacaggcatgagccacctcacctggTGGTGAAGACTCTAAAGGCTCTTCTCAGATCAGCCTTTGTCCTGAATTTCACATGCCCGTGTCCAGTTCCCTCCCCAGCATCTTTTCAGGAGTTCCATGGACTCACCTCTTCATTATCCAGGGTTAAGCTGCAGATATTGTTATTAGGATTCCACCttgttct s panTro4.chr19 59890228 439 + 63644993 ttttgagacagagtcttgctctgtcacccaggctggagtgcagtggtacaatct-------cactgcagcctccgcctcccaggttcaagtga-ttctcctgccttagcctcccgagtagctgggattacaggcgcctaccaccacgtctggctaatttttgtatt---agtagagacagcgtttcaccatgttggccaggctggtctcaaactgctgacctcaaatgaactgtctgcctcagcctcacaaagtactgggattacaggcatgagccacctcacctggTGGTGAAGACTCTAAAGGCTCTTCTCAGATCAGCCTTTGTCCTGAAGTTCACATGCCCGTGTCCAGTTCCCTCCCCAGCATCTTTTCAGGAGTTCCATGGTCTCGCCTCTTCATTATCCAGGGTTAAGCTGCAGATATTGTTATTAGGATTCCACCttgttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56721288 449 + 60714840 ttttgagacagaatctcgttctgttgcccagggtggagtgcagtggtgcaatctctcctcacactgcaacctccccctcccaggttgaagaaa-ttctcatgcatcagcctcctaagtaactgggaccacaggcgtgcaccactgcaccaggctactttttgtatttttagtagagatggggttttgccatgttgcccaggctagtctcaaactcctggcctcaagtgatctgtctgcctcggcctcacaaagtgctgggattacaggcgtgagccaccTGGTCTGGtggtgaagactctaaaggctcttctcagaccagcctttgtcctgaatttcacatgcccgtgttcagttgcctccccagcatctTTTCAGGAGTTCCACAGACTCGCCCCTTCATTATCCAGGGTTAAGCTGCAGATATTCTTATTAGGATTCCACCTTGTTCT i ponAbe2.chr19 T 90216 I 99025 s nomLeu3.chr10 103265366 423 - 106955855 ttttgagacagaatctcgttctgttgcccaggctggagtgcagtggtgcaatctctgctcacactgcaacctccacctcccaggttgaagcaa-ttctcatgcatcagcctcctaagtaactgggaccagaggcgtgcaccaccgcaccaggctactttgtgtatttttagtagagacggagttttgccatgttgcccaggctcgtctcaaactcctggcctcaagtgatctgtctgcctcggcctcacaaagtgctgggattacaggcgtgagccaccTCACGTGGtggtgaagactctaaaggctcttctcagaccagcctttgtcctgaagttcacatgcctgtgtccagttgcctccccagcatctTTTCAGGAGTTCCACGGACTCGCCCCTTCATTATCCAGGGTTAAGCTGCAGATA-------------------------- i nomLeu3.chr10 T 64436 C 0 s rheMac3.chr19 60551715 449 + 64156825 ttttgagacagaatctcgttctgtcgcccaggctggagtgcagtggcacaatctctgttcacactgcaccctccacctcccaggttgaagcaa-ttctcgtgcgtcggcctcctaagtaactgggaccacaggcgtgcaccaccgcaccaggctactttttgtatttttagtagagatggggttttgccatgtcgcccaggctagtctcaaactcctggcctcaagtgatctgtctgcctcggcctcacaccgtgctgggattacaggcgtgagccaccacgcctggTGGTGAAGACTCTAAAGGCTCTTCTCAGACCAGCCTTTGTCCTGAGGGTCACATGCCCGTGTCCAGTTACCTCTCCAGCATCTTTTCAGGAGTTCCATGGACTCGCCCCTTCATTATCCAGGGTTGAGCTACAGATATTCTGATTAGGATTCCACCTAGTTCT i rheMac3.chr19 T 77969 I 78069 s macFas5.chr19 55770927 435 + 59248254 ttttgagacag--tcttgctctgtcacccaggctagagtacagtggtacaatct-------cactgcagcctccgcctcccagattcaagagatttctcctgcctcagtctccctagtagctgggattacaggtgcctaccaccacgcctggctaattttcgtattttcagtagagacagggtttcaccatgttggccaggctggtctcgaactcctgagctcaagtgatctgtctgcctcagcctcacaacgtgctgggattacaggcgtgagccaccacgcctggTGGTGAAGACTCTAAAGGCTCTTCTCAGACCAGCCTTTGTCCTGAGGGTCACATGCCCGTGTCCAGCTGCCTCCCCAGCATCTTTTCAGGAGTTCCATGGACTCGCCCCTTCATTATCCAGGGTTAAGCTCCAGAT------ATTAGGATTCCACCttgttct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47875532 434 + 51301725 ttttgagacag--tcttgctctgtcacccaggctagagtacagtggtacaatct-------cactgcagcctccacctcccaggttcaagaga-ttctcctgcctcagtctccctaggagctgggattacaggcgcctaccaccacgcctggctaattttcgtattttcagtagagacagggtttcaccatgttggccaggctggtctcgaactcctgagctcaagtgatctgtctgcctcggcctcacaacgtgctgggattacaggcgtgagccaccgcgcctggtggtGAAGACTCTAAAGGCTCTTCTCAGACCAGCCTTTGTTCTGAGGGTCACATGCCCGTGTCCAGCTGCCTCCCCAACATCTTTTCAGGAGTTCCATGGACTCGCCCCTTCATTATCCAGGGTTAAGCTGCAGAT------ATTAGGATTccaccttgttct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47583751 433 + 50890351 ttttgagacag--tcttgctctgtcacccaggctagagtacagtggtacaatct-------cactgcagcctccgcctcccaggttcaagagatttctcctgcctca-tctccctagtagctgggattacaggtgcctaccaccacgcctggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatctgtctgcctcagcctcacaaagtgctgggattacaggcatgagccacctcgcctggTGGTGAAGACTCTAAAGGCTCTTCTCAGACCAGCCTTTGTCCTGAGGTTCACATGCCCGTGTCCAGTTACCTCCCCAGCATCTTTTCAGGAGTTCCATGGACTCGCCCCTTCATTATCCAGGGTTAAACTGCAAAT------GTTAGGATTCCACCttgttt- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45939502 715 + 49145316 I a score=620.000000 s hg38.chr19_GL949747v2_alt 622009 5 + 729520 -ctctc s panTro4.chr19 59890667 4 + 63644993 -cttt- i panTro4.chr19 C 0 C 0 s macFas5.chr19 55771362 4 + 59248254 -tttt- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47875966 5 + 51301725 ttttt- i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47584184 5 + 50890351 ttttt- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I e calJac3.chr22 45939502 715 + 49145316 I e nomLeu3.chr10 103265789 0 - 106955855 C e rheMac3.chr19 60552164 78069 + 64156825 I a score=215144.000000 s hg38.chr19_GL949747v2_alt 622014 141 + 729520 tttttttttttttttttgatacggagtctcgcttgctcttttg-ccaggctgaagtgcagtggagcgatcttggctcactgcaatctccgcctcctgggttcaagcaattcccttgcctcagcctcgcaagtagctgggact s panTro4.chr19 59890671 140 + 63644993 -ttttttttttttttttgagacggagtctcgcttgctcttttg-ccaggctgaagtgcagtggagcgatcttggctcactgcaatctccgcctcctgggttcaagcaattcccctgcctcagcctcgcaagtagctgggact i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103265789 133 - 106955855 --ttcttttctttttttgagac--agtctc----gctctgtcgcccaggctggagtgcagtggcgcagtctcggctcactgcaacctccatctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggac- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630233 141 + 64156825 ttttttcttttttttttgagattgagtctcacttgctttgttg-ccaggctggagcgcagtggcgcaatcgtggctcacttcagtctccgcctcctgggttcaagcaattcccctgcctcagcctcccaagtacctgggact i rheMac3.chr19 I 78069 I 8 s macFas5.chr19 55771366 140 + 59248254 ttttttcttttttttttgagattgagtctcacttgctttgttg-ccaggctggagcgcagtggcgcaatcgtggctcacttcagtctccgcctcctgggttcaagcaattcccctgcctcagcctcccaagtacctgggac- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47875974 141 + 51301725 tttttttttttttttttgagatggagtctcacttgctttgttg-ccaggctggaacgcagtggcgcaatcgtggctcacttcagtctccgcctcctgggttcaagcagttcccctgcctcagcctcccaagtacctgggact i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47584189 136 + 50890351 ttgttttttttttttttgagatggagtctc----gctttgttg-ccaggctggagctcagtggcgcaatcttggctcactgcagtctccgcctcctgggttcaagcaattcccctgcctcagcctcccaagtacctgggac- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I e calJac3.chr22 45939502 715 + 49145316 I a score=4871.000000 s hg38.chr19_GL949747v2_alt 622155 10 + 729520 tacaggtaac s panTro4.chr19 59890811 10 + 63644993 tacaggtaac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103265922 9 - 106955855 tacaggt-gc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55771506 9 + 59248254 tacagtt-gg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876115 8 + 51301725 -acagtt-gc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584325 9 + 50890351 tacagtt-gc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I e calJac3.chr22 45939502 715 + 49145316 I e rheMac3.chr19 60630374 8 + 64156825 I a score=233999.000000 s hg38.chr19_GL949747v2_alt 622165 140 + 729520 acaccaccatgcccggctaattttttg---ttttagtagagacggggcttcaccatgttggccgggatggtctcgatctcctgac-ctcatgatccgcctgccttggcctcccaaagtgttggg-ttacaggcatgagccaccat s panTro4.chr19 59890821 141 + 63644993 acaccaccatgcccggctaattttttg---ttctagtggagacggggcttcaccatgttggccaggatggtctcgatctcctgac-ctcatgatccgcctgcctcggcctcccaaagtgttgggattacaggcgtgagccaccat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103265931 144 - 106955855 ccgccaccacgcccagctaattttttgtatttttagtagagacagtgtttcaccgtgttatccaggatggtctcgatcttctgac-ctcaggatctacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgT i nomLeu3.chr10 C 0 I 66588 s rheMac3.chr19 60630382 143 + 64156825 gcaccaccatgcccggctaattttttgtg-ttttagtagagatggggcttcaccctgttggccaggatggtctcaatctcctgac-ttaatgatccacctgcctcggcctcccaaagtgttgggattacaggcgtgagccacccc i rheMac3.chr19 I 8 C 0 s macFas5.chr19 55771515 143 + 59248254 gcaccaccatgcccggctaattttttgtg-ttttagtagagatggggcttcaccctgttggccaggatggtctcaatctcctgac-ttaatgatccacctgcctcggcctcccaaagtgttgggattacaggcgtgagccacccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876123 143 + 51301725 tcaccaccatgcccggctaattttttgtg-ttttagtagagatggggcttcaccctgttggccaggatggtctcaagctcctgac-ttaatgatccacctgcgtcggcctcccaaagtgttgggattacaggcgtgagccacccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584334 144 + 50890351 tcaccaccatgcccggctaattttttgtg-ttttagtagagatagggcatcaccctattggccaggatggtctcaatctcctgacactaatgatccacctgcctcggcctcccaaagtgttgggattacaggcgtgagccacccc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I e calJac3.chr22 45939502 715 + 49145316 I a score=6141.000000 s hg38.chr19_GL949747v2_alt 622305 6 + 729520 gcccgg s panTro4.chr19 59890962 6 + 63644993 gcccgg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60630525 6 + 64156825 acccga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55771658 6 + 59248254 acccga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876266 6 + 51301725 acccga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584478 6 + 50890351 acccaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I e calJac3.chr22 45939502 715 + 49145316 I e nomLeu3.chr10 103266075 66588 - 106955855 I a score=353475.000000 s hg38.chr19_GL949747v2_alt 622311 201 + 729520 cTGATTCCACCTTGTTCTTACATTCTTTCCCAGTTCATTTTAAATTTATCTACCTCATCAGAAACTAGGGGGTTAGGCCTggcaggcagatcacctgaggttgggagttcgagaccagcctgaccaacgtagagaaaccctgtctgtactaaaaatacaaaattagccaggtatggtggcacattcctgtaatcccagcta s panTro4.chr19 59890968 201 + 63644993 cTGATTCCACCTTGTTCTTACATTCTTTCCCAGTTCATTTTAAATTTATCTACCTCATCAGAAACTAGGGGGTTAGGCCCggcaggcagatcacctgaggttgggagttcaagaccagcctgagcaacgtggagaaaccctgtctgtactaaaaatacaaaattagccaggtatggtggcgcattcctgtaatcccagcta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103332663 201 - 106955855 CTGATTCCACCTTCTTCTTACATTCTTTCCCAGTTCATTTTAAATTTATTTACCTCATCAGAAACTAGGGAGTTAGGCCCggcaggcagatcacctgaggttgggagttcgagaccagcctgaccaacatggagaaaccctgtgtgtactaaaaatacaaaattcgccaggtatggtggcgcatgccggtaatcccagcta i nomLeu3.chr10 I 66588 C 0 s rheMac3.chr19 60630531 201 + 64156825 cTGATTCCACCTTGTACTTATATTCTTTCCCAGTTCATTTTAAATTTATCTACCTCATCAGAAACTAGGGAGTTAGGCCCCgcagacagataacctgaggttgggagcttgagaccagcctgaccaacatggagaaaccctgtctgtactaaaaatacaaaattagccggacatggtggcccatgaccctcgtcccagcta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55771664 201 + 59248254 cTGATTCCACCTTGTACTTATATTCTTTCCCAGTTCATTTTAAATTTATCTACCTCATCAGAAACTAGGGAGTTAGGCCCCgcagacagataacctgaggttgggagcttgagaccagcctgaccaacatggagaaaccctgtctgtactaaaaatacaaaattagccggacatggtggcccatgaccgtcgtcccagcta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876272 201 + 51301725 cTGATTCCACCTTGTACTTATATTCTGTCCcagttcattttaaatttatctacCTCATCAGAAACTAGGGAGTTAGGCCCCGCAGacagataacctgaggttgggagctcgagaccagcctgaccaacatggagaaaccctgtctgtactaaaaatacaaaattagccggacatggtggcgcatgcccgtcgtcccagcta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584484 201 + 50890351 ccGATTCCACCTTGTACTTATATTCTTTCCCAGTTCATTTTAAATGTATCTACCTCATCAGAAACTAGGGAGTTAGGCCCCgcaggcagataacctgaggttgggagctcgagaccagcctgacaaacatggagaaaccctgtctgtactaaaaatacaaaattagccggacatggtggcgcatgcccgtcgtcccagcta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I e calJac3.chr22 45939502 715 + 49145316 I a score=114166.000000 s hg38.chr19_GL949747v2_alt 622512 53 + 729520 ctccggaggccgaggcaggagaatcacttgaacccaggaggcggagg--ttgcag s panTro4.chr19 59891169 53 + 63644993 ctcgggaggccgaggcaggagaatcacttgaaaccaggaggctgagg--ttgcag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103332864 53 - 106955855 ctcgggaggctgaggcaggagaatcacttgaacccaggaggcagagg--ttgcag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630732 53 + 64156825 ctcaggaggctgaggcaggagaatcacttcaacccaggaggcagagg--ttgcag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55771865 53 + 59248254 ctcaggaggctgaggcaggagaatcacttcaacccaggaggcagagg--ttgcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876473 53 + 51301725 ctcaggaggctgaggcaggagaatcacttcaacccaggaggcagagg--ttgcag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584685 53 + 50890351 ctcaggagactgaggcaggagaatcacttgaacccaggaggcagagg--ttgcag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45940217 53 + 49145316 ctcaggaggctgaggcaggagagaagcttgaacccaggagatggagggatcgt-- i calJac3.chr22 I 715 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I a score=253887.000000 s hg38.chr19_GL949747v2_alt 622565 140 + 729520 tgagc-cgacatcacaccatt-gcattccag-cctgggcaacaagagcaaaactacatctcaaaaaaaaa-------------------------gaaaaaCTAGGCAGTTAATCCTCAAAGCCTTT-CCAGTGGCCTTATGCGTGAGTA----GTTtgtgtg-------tgtgtgtgtg s panTro4.chr19 59891222 142 + 63644993 tgagc-cgagatcgcaccatt-gcattccag-cctgggcaacaagagcaaaactacgtctcaaaaaaaaaa-----------------------agaaaaaCTAGGCAGTTAATCTTCAAAGCCTTT-CCAGTGGCCTCATGCATGAGGG----gtgtgtgtg-------tgtgtgtgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56820762 141 + 60714840 tgagc-cgagatcgcaccattggcactccagccctgggcaacaagagcaaaactacatctcaaaaaaaaa-------------------------gaaaaTCTAGGCAGTTAATCCTCAAAGCCTTTCCCAGTGG-CTTATGCATGAgt-----gtgtgtgtg-------tgtgtctgtg i ponAbe2.chr19 I 99025 I 126 s nomLeu3.chr10 103332917 143 - 106955855 ggagc-agagatcgcaccatt-gcactccag-cctgggcaacaagagtgaaactacctctcaaaaaaaa--------------------------gaaaaaCTAGGCAGTTAATCCTCAAAGCCTTT-CCAGTGGCCTTATGCGTGAGTACTCtgtgtgtgtg-------tgtgtgtgtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630785 123 + 64156825 tgagc-cgagatcgcgccact-gcactccag-cccgggcaacaagagcgaaactccgtctcaa--------------------------------gaaaaaTTAGGCAGTTAATCCTCAAAGCCTTT-CCAGTGACCTTATGCGTGAGTA----CTGTGTGTG----------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55771918 123 + 59248254 tgagc-cgagatcgcgccact-gcactccag-cccgggcaacaagagtgaaactccgtctcaa--------------------------------gaaaaaTTAGGCAGTTAATCCTCAAAGCCTTT-CCAGTGACCTTATGCGTGAGTA----Ctgtgtgtg----------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876526 130 + 51301725 tgagc-cgagatcgcgccact-gcactccag-cccgggcgacaagagcgaaactccgtctcaa--------------------------------gaaaaattaGGCAGTTAATCCTCAAAGCCGTT-CCAGTGACCTTATGCGTGAGTA----CTGTGAGTACTGTGCG---------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584738 123 + 50890351 tgagc-cgagattgcgccact-gcactccag-cccgggcaacaagagcgaaactctgtctcaa--------------------------------gaaaaaTTAGGCAGTTAATCCTCAAAGCCTTT-CCAGTGACCTTATGCGTGAGTA----Ctgtgtgtg----------------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45940270 145 + 49145316 tgagcaagttattgtaccgag-gcacatcag-cttacgaaacacagacgaaagtctatctcaagacaaatatagggaaataaaaaTCGATAAGTAAAGAAAGTAGGGAGCTAATCCTCAAAGCCTTT-CCAAGCA-TTTATGTGTGAGT------------------------------- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I a score=30663.000000 s hg38.chr19_GL949747v2_alt 622705 27 + 729520 tgtgtg-----------------------------------tgtgtgtgtgtgtgt--------CTTTCA s panTro4.chr19 59891364 35 + 63644993 tgtgtg-----------------------------------tgtgtgtgtgtgtgtgtgtgtgtCTTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821029 27 + 60714840 tgtgtg-----------------------------------tctgtgtgtgtgtgt--------TTTTCA i ponAbe2.chr19 I 126 C 0 s nomLeu3.chr10 103333060 27 - 106955855 tgtgtg-----------------------------------tgtgtgtgtgtgtgt--------CTTTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630908 21 + 64156825 -----------------------------------------TGTCTGTGTGTCTGT--------TTTTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55772041 21 + 59248254 -----------------------------------------tgtctgtgtgtctgt--------TTTTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876656 62 + 51301725 TGAGTACTGTGAGCCGTTCCAGTGACCTTATGCGTGagtactgtgtgtgtgtctgt--------ttttca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584861 21 + 50890351 -----------------------------------------tgtctgtgtgtctgt--------TTTTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45940415 19 + 49145316 -------------------------------------------CCTGCGGTAATGT--------GTTTCA i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I a score=83355.000000 s hg38.chr19_GL949747v2_alt 622732 39 + 729520 CACCATGTGTTCTGAACTACTTAGGAA--TTCTC--------ACCAGAA s panTro4.chr19 59891399 39 + 63644993 CACCATGTGTTCTGAACTACTTAGGAA--TTCTC--------ACCGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821056 39 + 60714840 CACCATGTGTTCTGAACTACTAAGGAA--TTCTC--------ACCAGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333087 39 - 106955855 CACCATGTGTTCTGAACTACTTAGGAA--TTCTC--------ACCAGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630929 37 + 64156825 CGCCTTGAGTTCTGAACT--TTTAGAA--TTCAC--------ACCAGAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55772062 37 + 59248254 CGCCTTGAGTTCTGAACT--TTTAGAA--TTCAC--------ACCAGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876718 37 + 51301725 cGCCTTGAGTTCTGAACT--TTTAGAA--TTCGC--------ACCAGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584882 37 + 50890351 CACCTTGAGTTCTGAACT--TTTAGAA--TTCGT--------ACCAGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45940434 41 + 49145316 CCCCATGAGATATGAAATCAATAGGAGTCTTCTC--------ACCAGAA i calJac3.chr22 C 0 I 328 s canFam3.chr1 20042820 47 - 122678785 CACTGTGTGTTCTCAACTACACAGGAA--GCAACCATAGGAAGCCAGAA i canFam3.chr1 I 933 I 1 a score=80680.000000 s hg38.chr19_GL949747v2_alt 622771 28 + 729520 AGGCACATAAACCTGGGATCATGGCCTA s panTro4.chr19 59891438 28 + 63644993 AGGCACGTAAACCTGGGATCATGGCCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821095 28 + 60714840 AGGCACGTAAACCTGGGATCATGGCCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333126 28 - 106955855 AGGCACGTAAACCTGGGATCATGGCCTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630966 28 + 64156825 AGGCACCTAAACCTGGGATCATGGCCTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55772099 28 + 59248254 AGGCACCTAAACCTGGGATCATGGCCTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876755 28 + 51301725 AGGCACCTAAACCTGGGATCATGGCCTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584919 28 + 50890351 AGGCACCTAAACCTGGGATCATGGCCTA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20042868 28 - 122678785 AGACATGTAAGCCTGAGATAGTAACTTG i canFam3.chr1 I 1 C 0 e calJac3.chr22 45940475 328 + 49145316 I a score=965021.000000 s hg38.chr19_GL949747v2_alt 622799 327 + 729520 ATGTACTTTCACTTTTACATCCAGTACCTTATCAACGTCCTTTTTAG-------------TACCTAATCTAGGCTTCACTACTGAGACTCAGGGGTCCAACTTGAGCCATCTTGGAGTCCC--------------------ACTGCCAGCACAGCAACAGGCCTGTAATGC-CGCCC--TTTTTCTCCAGGGATAACACGG---AAAGAACGACCA---CCTCTAGACGTGGACGAAATGCTGGAGCGCTTCAAAACAGAAGCACAAGGTGGGTGTCAGGACCTCCAATGTTGGAGTCAGCTGA-GGAAGC-CCCCCGTTCTTGCTGCTATCT--------CCTGTTCCTTTGAAGAACCCCATCTCTCTCCAATCTTT-- s panTro4.chr19 59891466 327 + 63644993 ATGTACTTTCACTTTTACATCCAGTACCTTGTCAACGTCCTTTTTAG-------------TACCTAATCTAGGCTTCACTACCGAGACTCAGTGGTCGAACTTGAGCCATCTTGGAGTCCC--------------------ACTGCCAGCACAGCAACAGGCCTGTAACGC-CCCCC--TTTTTCTTCAGGGATAACAAGG---AAAGAACGACCA---CCTCTAGACGTGGACGAAATGCTGGAGCGCCTCAAGACAGAAGCACTAGGTGGGTGTCAGGACCTCCAGTGTTGGAGTCAGCTGA-GGAAGC-CGCCCATTCTTGCTGCTTTCT--------CCTGTTCCTTTGAAGAACCCCATCTCTCTCCAGTCTTT-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821123 342 + 60714840 ATGTACTTTCACTTTTACATCCAGTACCTTGTCAACATCCTTTTTAGTAATCTAGTAAATTACCTAATCTAGACTTAACTATTGAGACTCAGTGGTCGAACTTGAGCCATCTTGGAGTCCC--------------------ACTGCCAGCACAGCAACAGGCCTGTAATGCGCCCCC--TTTTTCTTCAGGGATAACACGG---AAAGAACAACCA---CCTCTAGACGTGGAGGAAATGCTGGAGCACTTCAAAGCAGAAGCACTAGGTGGGTGTCAGGACCTCCGATGTTGGAGTCAGCTGAGGGAAGC-CGCCCCTTCTTGCTGCTTTCT--------CCTGTTCCTTTGAAGAACCCCATCTCTCTCCAATCTTT-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333154 342 - 106955855 ATGTACTTTCACTTTTACATCCAGTACCTTGTCCACATTCTTTTTAGTAATCTAGTAAATTACCTAATCTAGGTTTAACTATTGAGACTCAGTGGTCGAACTTGAGCCATCTTGGAGTCCC--------------------ACTGCCAGCACAGCAACAGGCCTGTAATGTCCCCCC--TTTTTCTTCAGGGGTAACACGG---AAAGAACGACCA---CCTCTAGACCTGGAGGAAATGCTGGAACGCTTCAAAGCAGAAGCACTAGGTGGGTGTCAGGACCTCCGACGCTGGAGTCAGCCAAGGGAAGC-CGCCCCTTCTTGCTGCTTTCT--------CCTGTTCCTTTGAAGAACCCCATCTCTCTCCAATCTTT-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630994 341 + 64156825 ATGTACTTGCACTTTTACATCCAGTACCTCGTCAACATCCTTTTTAGTAATCTAGTAAATTACCTCATCTTGGCTTAACTATTGAGACTCAGTGGTC-CACTTGAGCCATCTTGGAGGCCC--------------------ACTGCCAGCACAGCAACAGGCCAGTAATGCCCCCCC--TTTTTCTTCAGGGATAACACGG---AAAGAAAGACAA---CCTGTAGACGTGGAGGAAATGCTGGAGCGTTTCAAAGCAGGAACACTAGGTGGGTGACAGGACCTCCAATGCTGGAGTCAGCTGAGGGAAGC-TGCCCCTTCTTGCTGCTTTCT--------CCTGTTCCTTTTAAGAACCCTGTCTCTTTCCGATCTTT-- i rheMac3.chr19 C 0 I 307 s macFas5.chr19 55772127 341 + 59248254 ATGTACTTGCACTTTTACATCCAGTACCTCGTCAACATCCTTTTTAGTAATCTAGTAAATTACCTCATCTAGGCTTAACTATTGAGACTCAGTGGTCGCACTTGAGCCATCTTGGAGGCCC--------------------ACTGCCAGCACAGCAACAGGCCAGTAATGCCCCCCC--TTTTTCTTCAGGGATAACACGG---AAAGAAAGACAA---CCTGTAGACGTGGAGGAAATGCTGGAGCGTTTCAAAGCAGGAACACTAGGTGGGTGACAGGACCTCCGATGCTGGAGTCAGCTGAGGGAAGC-TGCCCCTTCTTGCCGCTTTCT--------CCTGTTCCTTTTAAGAACCCCGTCTCTTTCCGATCTT--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876783 342 + 51301725 ATGTACTTGCACTTTTACATCCAGTACCTCGCCAACATCCTTTTTAGTAATCTAGTAAATTACCTCATCTAGGCTTAACTATTGAGACTCAGTGGTCGCACTTGAGCCATCTTGGAGGCCC--------------------ACTGCCAGCACAGCAACAGGCCAGTAATGccccccc--TTTTTCTTCAGGGATAACACGG---AAAGAAAGAGAA---CCTGTAGACGTGGAGGAAATGCTGGAGCGTTTCAAAGCAGGAACACTAGGTGGGTGACAGGACCTCCGATGCTGGAGTCAGCTGAGGGAAGC-TGCCCCTTCTTGCTGCTTTCT--------CCTGTTCCTTTTAAGAACCCTGTCTCTTTCCGATCTTT-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584947 342 + 50890351 ATGTACTTGCACTTTTACATCCAGTACCTCGTCAACATCCTTTTTAGTAATCTAGTAAATTACCTAATCTAGGCTTAACTACTGAGACTCAGTGGTCGCACTTGAGCCATCTTGGAGGCCC--------------------ACTGCCAGCACAGCAACAGGCCAGTAACGCCCCTCC--TTTTTCTTCAGGGATAACACGG---AAAGAAAGACAA---CCTATAGACGTGGAGGAAATGCTGGAGCGTTTCAAAGCAGGAACACTAGGTGGGTGACAGGACCTCCGATGCTGGAGTCAGCTGAGGGAAGC-TGCCCCTTCTTGCTGCTTTCT--------CCTGTTCCTTTTAAGAACCCCGTCTCTTTCCAATCTTT-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45940803 347 + 49145316 ACATACTTCCATTTTTATATCCAGTACCTTGTCAACATCGACTGTCCTAAGCTAGTAAATTAGCTAATCTAGGCGTAAGTATTGAGACTCAGTGGTTGCATTTGAGCCAGCCTGGAGTCCC--------------------ACGGCCAGCACAGCCACAGGCCTGTAGTGTCCCCTCTATTTTTTTTCAGAGACAATACGG---AAAGGAGAACCAGAGCCTGTAGACCTGGATGAAATGCTGGTGCACTTCAAGGCAGAAGCACAAGGTGGGTGTTAGGACCTCCGACGTCAGAGTCCGCTGAGGGAAGC-TGCCCTCTCCTGCCGCTTTCT--------CCTGTTCCTCTGGAGAACCCCAACTCTCCCCAATCTCA-- i calJac3.chr22 I 328 I 2 s canFam3.chr1 20042896 354 - 122678785 ACACATTTTAA-TTTTATCTCTAAGATCAGGTTAATGTCCTTTTTATGTAACTGG---------------GGGTTTAAGTA-TGAGACCCAGTTGTC-AACATGCGCATTCTTGAAGTCCTCTCTCCTAGGCAGAAGTTTAAGTACTGACATAGTTACAGGACTATAATG--CCTCC--TCTTTTCTCAGGGATCACCAGGACTACAGAACTAAAA---TGTGCAAACCTGGAAGAACCCCCAGAGCATGTAGAAGAAAAAGATTCAGGTTGGTCTTAGAACACCCAGAGTTGGAACAAGCCAAGCGACACATACCCCACCATGTTGTGTTCTCTCCACCCCCTTTCCTTTCTGGGAGCTCCATTTC--CCCAACCTCATT i canFam3.chr1 C 0 C 0 a score=220421.000000 s hg38.chr19_GL949747v2_alt 623126 73 + 729520 TCCTCCACTATTCTTAATGTGCCCACTGTCTCCTGGAGAATGCCAACCTCCCTTCCGTAAGAATAGAGGGAAG s panTro4.chr19 59891793 73 + 63644993 TTCTCCACTATTCTTAATGTGCCCACTGTCTTCTGGAGAATGCCAACCTCCCTTCCATAAGAATAGAGGGAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821465 69 + 60714840 TTCTCCACTATTCTTAATGTGCCCACTGTCTCCTGGAGAATGCCAACCTC----CCATAAGAATAGAGGGAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333496 73 - 106955855 CTCTCCACTCTTCTTAATTTGCCCACTGTCTCCCGGAGAATGCCAACCTCCCTTCCATAAGAATAGAGGGAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60631642 73 + 64156825 TCCTCCACTATTCTTAATCTGCCCACTGTCTCCTAGAGAATTCCAACCTCCCTTCCCTAAGAATAACGGGAAG i rheMac3.chr19 I 307 C 0 s macFas5.chr19 55772468 73 + 59248254 TCCTCCACTATTCTTAATCTGCCCACTGTCTCCTAGAGAATTCCAACCTCCCTTCCGTAAGCATAGCGGGAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47877125 73 + 51301725 TCCTCCACTATTCTTAATCTGCCTACTGTCTCCTGGAGAATTCCAACCTCCCTTCCATAAGCATAGCGGGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47585289 73 + 50890351 TTCTCCACTATTCTTAATCTGCCTACTGTCTCCTGGAGAATTCCAACCTCCCTTCCGTAAGAATGGCGGGAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45941152 73 + 49145316 TTCTCCACTATTTTTAATTTGCCTACTGTCTACTGGAGAATGCCAAACTCCCTTCCATAAGAATAGAGGAAAg i calJac3.chr22 I 2 I 398 s canFam3.chr1 20043250 72 - 122678785 TTCTCCACTACTAATAGT-TATCAGTTGTCTCAGAGGAAATGCCTTCCTCCCTCACTTAACAACAAAGTGAGG i canFam3.chr1 C 0 C 0 a score=20214.000000 s hg38.chr19_GL949747v2_alt 623199 9 + 729520 AACGAACGT s panTro4.chr19 59891866 9 + 63644993 AACGAACAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821534 9 + 60714840 AACGAACGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333569 9 - 106955855 AACGAACGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60631715 9 + 64156825 AACAAACGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55772541 9 + 59248254 AACAAATGT i macFas5.chr19 C 0 I 368 s papAnu2.chr19 47877198 9 + 51301725 AACAAATGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47585362 9 + 50890351 AACAAATGT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20043322 9 - 122678785 AATGACCAC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45941225 398 + 49145316 I a score=102825.000000 s hg38.chr19_GL949747v2_alt 623208 78 + 729520 TGCAGAGAATTAGAAC----TCAGTTTGTAGAAAGTTAGGAGCACAGCGCAGAG--AGtttttg--tttttgtttttg-ttttgaga s panTro4.chr19 59891875 72 + 63644993 TGCAGAGAATTAGAAC----TCAGTTTGTAGAAAGTTAGGAGCACGATGCAGAG--AGtttttg--tttttgtttt-------gaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821543 72 + 60714840 TGCAGAGAATTAGAAC----TCAGTTTGTAGAAAGTTAGGAGCACGGTGCAGAG--AGtttttg--tttttgtttt-------gaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333578 79 - 106955855 TGCAGAGAATTAGAAC----TCAGTTTGTAGAAAGTTAGGAGCACGGTGCAAAG--AGttcttg--tttttgtttttgtttttgaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60631724 66 + 64156825 TGCGGAGAATTAGAAC-----CAGTCTGTAGAAAGTTAGGAGCATGGTGCAG-------Gtttg--tttttgtttt-------gaga i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47877207 66 + 51301725 TGCGGAGAATTAGAAC-----CAGTCTGTAGAAAGTTAGGAGCGTGGTgcag-------ttttg--tttatgtttt-------gaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47585371 66 + 50890351 TGTGGAGAATTAGAAC-----CAGTCTGTAGAAAGTTAGGAGCATGGTGCAG-------ttttg--tttttgtttt-------gaga i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20043331 79 - 122678785 TGAAGAGAACTGGAATTCTTTCAGTTCACGGAAAATT-GGTGTACTGTATGGAGTTACTCTTTAATTTTTCAATTT-------CAGA i canFam3.chr1 C 0 I 1335 e calJac3.chr22 45941225 398 + 49145316 I e macFas5.chr19 55772550 368 + 59248254 I a score=75913.000000 s hg38.chr19_GL949747v2_alt 623286 50 + 729520 cag----tttctctgttggccaggttggaatgcaatggcgcgatctcggctcac s panTro4.chr19 59891947 50 + 63644993 cag----tttctctgttggccaggctggaatgcaatggcgcgatctcggctcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821615 50 + 60714840 cag----tttctctgttgcccaggctggaatgcaatggcgagatctcggctcac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333657 54 - 106955855 cggagtctcgctctgtcgcccaggctggagtgcagtggcgcaatctcggctcac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60631790 52 + 64156825 tggag--tttctctgtcgcccaggctggaatgcagtggcgcgatctcagctcac i rheMac3.chr19 C 0 M 226 s papAnu2.chr19 47877273 52 + 51301725 tggag--tttctccgtcgcccaggctggaatgcagtggtgcgatctctgctcac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47585437 52 + 50890351 tggag--tttctctgttgcccaggctggaatacagtggtgcgatctctgctcac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e macFas5.chr19 55772550 368 + 59248254 I a score=125908.000000 s hg38.chr19_GL949747v2_alt 623336 117 + 729520 tgtaacctccacctcccaggttcaagcgattctcctgattctcctgactcagcctc-ctgagtagctgggattataggcacctgccaccacacccagctaattttttttttttttttt s panTro4.chr19 59891997 117 + 63644993 tgtaacctccacctcccaggttcaagcgattctcctgattctcctgactcagcctc-ctgagtagcggggattataggcacctgccaccacacccagctaattttttttttttttttt i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 56821665 117 + 60714840 tgtaacttccacctcccaggttcaagcgattctcctgattctcctgactcagcctc-ctgagtagccaggattataggcacctgccaccacacccaactaattttttttttttttttt i ponAbe2.chr19 C 0 I 9 s nomLeu3.chr10 103333711 108 - 106955855 tgcaagctccgcctcccgggttcacgc---------cattctcctgcctcagcctctccgagtagctgggactacaggcgcccgccaccacg-ccggctaattttttttttgtatttt i nomLeu3.chr10 C 0 I 5 s papAnu2.chr19 47877325 114 + 51301725 tgcaacctccacctcccaggttcaagcaattctcctgaccctcctgcctcagcctc-ctgagtagctgggattgcaggtgcctgccaccacacccagctaatttttttttttttt--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47585489 114 + 50890351 tgcaacctccacctcccaggttcaagcgattctcctgactctcctgcctcagcctc-ctgagtagctgggattgcaggtgcctgccaccacacccagctaatttttttttttttt--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e macFas5.chr19 55772550 368 + 59248254 I e rheMac3.chr19 60631842 226 + 64156825 M a score=187842.000000 s hg38.chr19_GL949747v2_alt 623453 132 + 729520 gagacgaag--------------------------------------------------------------------------------------------------tcttgttct-------------tgtcacccaggctggagtatagtggcaccatccctgttcactgcaacctccgcctcccagattcaag---------tgattgtcctgtctcagcctcctgagtagctgggactacaggtgcat s panTro4.chr19 59892116 132 + 63644993 gagacgaag--------------------------------------------------------------------------------------------------tcttgttct-------------tgtcacccaggctggagtatagtggcaccatcccttttcactgcaacctccgcctcccagattcaag---------tgattgtcctgtctcagcctcctgagtagctgggactacaggtgcat i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 56821791 132 + 60714840 gagacgaag--------------------------------------------------------------------------------------------------tcttgttct-------------tgtcacccaggctggagtatagtggcaccatccctgttcactgcaacctccgcctcccagattcaag---------tgattgtcctgcctcagcctcctgagtagctgggactacaggtgcat i ponAbe2.chr19 I 9 C 0 s nomLeu3.chr10 103333824 251 - 106955855 gagacagggtttcaccgtggtctcgatctcctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaagcgtgagccaccacacccggcctttgtttttgttttgagacagtttctctgtcgcccaagctggaatgcaatggcacgatctcggctcactgtaacctccacctcccaggtccaagcaattctcctgattctcctgactcagccgcctgagtagccggga-tataggcgcct i nomLeu3.chr10 I 5 C 0 s macFas5.chr19 55772918 132 + 59248254 gagacgaag--------------------------------------------------------------------------------------------------tcttgttct-------------tgtcatccaggctggagtacagtggtatcatccctgttcactgcagcctccgcctcccaggttcaag---------tgattctcctacctcagcctcccaagtagctgggattataggtgcac i macFas5.chr19 I 368 C 0 s papAnu2.chr19 47877439 132 + 51301725 gagatgaag--------------------------------------------------------------------------------------------------tcttgttct-------------tgtcatccaggctggagtacagtggtatcatccctgttcactgcagcctccgcctcccaggttcaag---------tgattctcctacctcagcctcccaagtagctgggattacaggtgcac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47585603 132 + 50890351 gagatgaag--------------------------------------------------------------------------------------------------tcttgttct-------------tgtcatccaggctggagttcagtggtatcatccctcttcactgcagcctccgcctcccaggttcaag---------tgattctcctacctcaacctcccaagtagctgggattacaggtgcat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e rheMac3.chr19 60631842 226 + 64156825 M a score=176858.000000 s hg38.chr19_GL949747v2_alt 623585 102 + 729520 gccaccacgcccagctaatt-----tttttttgtacttttagtagagacaggtttcaccatctcattcagggtgg------------------------tctcaaactcctgacctcaaga-----------gatctgct--cc s panTro4.chr19 59892248 99 + 63644993 gccaccacgcccagctaatt-----tttttt-gtacttttagtagagacaggtttcaccatctcagtcaggctgg------------------------tctcgaactcctgacctc--ga-----------gatctgcc--cc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821923 102 + 60714840 gccaccacgcccagctaatt-----tttttttgtatttttagtagagacaggtttcaccatctcagtcaggctgg------------------------tcttgaactcctgacctcaaga-----------gatctgca--cc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103334075 135 - 106955855 gccaccacacccagcTAACt-----ttttttttttttttttg-agacaaagtcttgttcttgtcacccaggctggagtatagtggcaccatccctgttcactgcaacctctgcctcccagattgaagtgattgtcctgcc--t- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60632068 105 + 64156825 gccaccaagcccagctaattttttctttttttatatttttagtagagacaggtttcaccatctcagtcaggctgg------------------------tctcgaactcctgacctcaaga-----------gatctgcc---- i rheMac3.chr19 M 226 C 0 s macFas5.chr19 55773050 105 + 59248254 gccaccaagcccagctaattttttctttttttatatttttagtagagacaggtttcaccatctcagtcaggctgg------------------------tctcaaactcctgacctcaaga-----------gatctgcc---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47877571 107 + 51301725 gccaccaagcccagctaattttttctttttttgtatttttagtagagacaggtttcaccatctcagtcaggctgg------------------------tctcgaactcctgacctcaaga-----------gatctgcccc-- i papAnu2.chr19 C 0 M 318 s chlSab2.chr6 47585735 105 + 50890351 gccaccaagcccagctaattttttctttttttgtatttttagtagagacaggtttcaccatctcagtcaggctgg------------------------tctcgaactcctgacctcaaga-----------gatctgcc---- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I a score=210.000000 s hg38.chr19_GL949747v2_alt 623687 8 + 729520 acccaccc s panTro4.chr19 59892347 2 + 63644993 ------cc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822025 2 + 60714840 ------cc i ponAbe2.chr19 C 0 I 2 s rheMac3.chr19 60632173 3 + 64156825 -----ccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55773155 3 + 59248254 -----ccc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47585840 3 + 50890351 -----ccc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103334210 0 - 106955855 C e papAnu2.chr19 47877678 318 + 51301725 M a score=49644.000000 s hg38.chr19_GL949747v2_alt 623695 50 + 729520 ccaagtctcccgaagtgctgggattacaggcgagagccaccgtacccggc s panTro4.chr19 59892349 50 + 63644993 cccagtctcccaaagtgctgggattacaggcgtgagccaccgtacccggc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103334210 48 - 106955855 --cagcctcctgagtagctgggactacaggtgcatgccaccacgcccagc i nomLeu3.chr10 C 0 M 880 s rheMac3.chr19 60632176 50 + 64156825 ttcagcctcccaaagtgctgggatcacaggcatgagccacagcacgcggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55773158 50 + 59248254 ttcagcctcccaaagtgctgggatcacaggcatgagccacagcacgcggc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47585843 50 + 50890351 ttcagcctcccaaagtgctgggatcacaggcatgagccacagcacgcggc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e ponAbe2.chr19 56822027 2 + 60714840 I e calJac3.chr22 45941225 398 + 49145316 I e papAnu2.chr19 47877678 318 + 51301725 M a score=165380.000000 s hg38.chr19_GL949747v2_alt 623745 200 + 729520 cTTCTTTAAATTATTTAAAAGTTGACAGGTggccaggtgtggtggctctcacctataatctcccagcactttgggaggctgaggcgggtggatca--------agagatcgagaccatcctggccaacatggtgaaaccc-aactctactaaaaacacaaaaattagccgggtgtggtggcacccgcctgtagtcccagctactcagga s panTro4.chr19 59892399 209 + 63644993 cTTCTTTAAATTATTTAAAAGTTGACTGGTggccaggtgtggtggctcacacctataatctcccagcactttgggaggctgaagcgggtggatcacgagatcaagagatcgagaccgtcctggccaacatggcgaaaccccaactctactaaaaacacaaaaattagccgggtatggtggcacccgcctgtagtcccagctactcagga i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60632226 209 + 64156825 cTTCTTTAAATTCTTTACAAGTTGACAGGTggccaggcacggtagctcacacctgtaatctcccagcactttgggaggctgaggcgggtgggtcgtgagttcaagagattgagaccatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcgtgtacctgtagtcccagctactcagaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55773208 209 + 59248254 cTTCTTTAAATTCTTTACAAGTTGACAGGTggccaggcacggtagctcacacctgtaatctcccagcactttgggaggctgaggcgggtggatcgtgagttcaagagattgagaccatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcgtgtacctgtagtcccagctactcagaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47585893 207 + 50890351 cTTCTTTAAATTCTTTACAAGTTGACAGGTggccaggcacggtagctcacgcctgtaatctcccagcactttgggaggctgaggcgggtggatcgtgagttc--gagattgagactatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcgcgtaccggtagtcccagctactcagaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e ponAbe2.chr19 56822027 2 + 60714840 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103334258 880 - 106955855 M e papAnu2.chr19 47877678 318 + 51301725 M a score=247646.000000 s hg38.chr19_GL949747v2_alt 623945 223 + 729520 ggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccaagattgtgccactgcactccagcctggcaacagtgcgagactccatctt-aaaaaaaaaaaaaaaaaa--TTGACAGGCATAAATGTATTTATGGTACATTGCTCAGACAACTTTAATATAAACAACTTACAGAGAAAATTGAGTCTTTTGGGTAGGTGACTTGCCTGAGCTG s panTro4.chr19 59892608 225 + 63644993 ggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccaagattgtgccactgcactccagcctggcaacagtgcgagactccatctt-aaaaaaaaaaaaaaaaaaaaTTGACAGGCATAAATGTATTTATGGTACATTGCTCAGACAACTTTAATATAAACAACTTACAGAGAAAATTGAGTCTTTTGGGTAGGTGACTTGCCTGAGCTG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103335158 220 - 106955855 ggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagccaagatcgtgccactgcactccagcctggcaacagcgtgagactccatctc-aaaaaaaaaaaaaaa-----TTGACAGGCATAAATGTATTTATGGTACATTGTTCAGACAACTTTAATATAAACAACTCACAGAGAAAATTGAGTCTTTTGGGTAGGTGACTTGCCTGAGCTG i nomLeu3.chr10 M 880 C 0 s rheMac3.chr19 60632435 205 + 64156825 ggctgaggcaggagaatcccttgaacctgggaggcagaggttgtagtgagctgagatcgtgccgctgtactccagcctggtgatagagcgagactccgtctcaaaaaaaaa------------TTGACAGGTATAAATGTATTTATGGTACATTGTTCAGACAACTT-----TAAACAACTC----AGAAAATTGAGTCTTATGGGTAGGTGACTTGTCTGAGCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55773417 204 + 59248254 ggctgaggcaggagaatcccttgaacctgggaggcagaggttgtagtgagctgagatcgtgccgctgtactccagcctggtgatagagcgagactccgtctc-aaaaaaaa------------TTGACAGGTATAAATGTATTTATGGTACATTGTTCAGACAACTT-----TAAACAACTC----AGAAAATTGAGTCTTATGGGTAGGTGACTTGTCTGAGCTG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47586100 206 + 50890351 ggctgaggcaggagaatcccctgaacctgggaggcagaggttgtagtgagctgagatcgtgccgctgtactccagcctggcaatagagcgagactctgtctc-aaaaaaaa------------TTGACAGGTGTAAATGTATTTATGGTACATTGTTCAGACAACTT-----TAAACAACTC--AGAGAAAATTGAGTCTTATGGGTAGGTGACTTGTCTGAGCTG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e ponAbe2.chr19 56822027 2 + 60714840 I e calJac3.chr22 45941225 398 + 49145316 I e papAnu2.chr19 47877678 318 + 51301725 M a score=415354.000000 s hg38.chr19_GL949747v2_alt 624168 267 + 729520 ACTTTGTGAT-AGG-ttttttctg-----------ttttttttgtttttgaaatagagtctcactctgtcatgcaggctggagtgcagtggccccatcttggctcactgcaatctctgcctcctgggttc-aaggggtcttcctgccacagcctccccaggtgctgggacta-taggtgcccaccac--tatgcctggctaacttttgtgtttttagtacagatggggtttcaacagggtagccaggttggtctagaactcctgacctcaagtgatccacctac s panTro4.chr19 59892833 266 + 63644993 ACTTTGTGAT-AGG-ttttttctg-----------ttttttt-gtttttgaaatagagtctcactctgtcgtgcaggctggagtgcagtggcccgatcttggctcactgcaatctctgcctcccgggttc-aagggatcttcctgccacagcctccccaggtgctgggacta-taggtgcccaccac--tatgcctggctaactgttgtgtttttagtacagatggggtttcaccagggtagccaggttggtctggaactccttacttcaagtgatccacctac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103335378 260 - 106955855 ACTTTGTGAT-AGGtttttttctg-----------ttttttttgtttttgaaatagagtctca--ctgtcacgcaggctggagtgcagtggcccgatcttggctcactgcaatctctgcctcctgggttc-aagggatcttcctgccatagcctccccaggtgctgggactg-taggtgcccaccactatatgcctggcta--------gtttttagtacagatggggtttcgccagggtagccaggttggtctggagctcctgacctcaagtgatccacctac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60632640 266 + 64156825 ACTTTGTGATCAGG-ttttttctg--gg-----------tttttttctggaaatggagtctcactgtgtcacgcaggctggagtccagtggctcgatctcggctcactgcaatctctgcctcccaggttctaagggatgtttctgccgcagcctccccaggtactgggactactaggtgcccaccac--tatgcctggctaacttttgtgtttttagtacagat--agtctccccagggtagccaggttggtctggaactcctaacctcaagtaatctgcctac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55773621 266 + 59248254 ACTTTGTGATCAGG-ttttttctg--gg-----------tttttttctggaaatggagtctcactgtgtcatgcaggctggagtccagtggctcgatctcggctcactgcaatctctgcctcccaggttctaagggatgtttctgccgcagcctccccaggtactgggactactaggtgcccaccac--tatgcctggctaacttttgtgtttttagtacagat--agtctccccagggtagccaggttggtctggaactcctaacctcaagtaatctgcctac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878000 272 + 51301725 aCTTTGTGATCAGg-ttttttctgttgg-------tttttttttttctcaaaatggagtctcactgtgtcacgcaggctggagtccagtggcttgatctcggctcactgcaatctctgcctcccaggttctaaggGATGTTTCTGCCGCAGCCTCCCCAGGTACTGGGACTagtaggtgcccaccac--tatgcctggctaacttttgtgtttttagtacagat--agtcTCCCCAGGgtagccaggttggtctggaactcctaacctcaagtaatctgcctac i papAnu2.chr19 M 318 C 0 s chlSab2.chr6 47586306 277 + 50890351 ACTTTGTGATCAGG-TTttttctg--ttttttttttttttttttttctcaaaacggagtctcactgtgtcacgcaggctggagtccagtagcttgatctcggctcactgcaatctctgcctgctaggttctaagggatgtttctgccgcagcctccccaggtacgggaactactaggtgcccaccac--tatgcctggctaacttttgtgtttttagtacagat--agtctccccagggtagccaggttggtctggaactcctaacctcaagtaatctgcctac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e ponAbe2.chr19 56822027 2 + 60714840 I e calJac3.chr22 45941225 398 + 49145316 I a score=401953.000000 s hg38.chr19_GL949747v2_alt 624435 183 + 729520 ctcggtctcctaaagtgctgggattacagctgtgaaccaccgcacctagccTGTGATCAGTTTCAGATCAGCCTTGCTTACTC-CACATTCCCTCTTATCTTCCTGGTAGCAtttttgttttttcttgagaaagagttttgcccttgtcgcccaggctagagtgcaatggtgtgatctcggctc s panTro4.chr19 59893099 183 + 63644993 ctcggtctcctaaagtgctgggattacagctgtgaaccaccgcacctagccTGTGATCAGTTTCAGATCAGCCTTGCTTACTC-CACGTTCCCTCTTATCTTCCTGGTAGCAtttttgttttttcttgagaaagagttttgcccttgtcgcccaggctagagtgcaatggtgtgatctcggctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822029 183 + 60714840 ctcagtctcccaaagtgctgggattacaggtgtgaaccaccgcacccagccTGTGATAAGTTTCAGATCAGCCTTGCTTACTC-CACGTTCCCTCTTATCTTCCTGGTAGCAtttttgttttttcttgagaaagagtttcgcccttgttgcccaggctggagtgcaatggtgtgatctcggctc i ponAbe2.chr19 I 2 C 0 s nomLeu3.chr10 103335638 183 - 106955855 ctcggtctcccaaagtgctgggattacaggtgtgaaccaccacacccagccTGTGATCAGTTTCAGATCAGCCTTGCTTACTC-CACGTTCCCTCTTATCTTCCTGGTAGCAtttttgttttttcttgagaaagagtttcacccttgtcgcccaggctggagtgcagaggtgtcatcttggctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60632906 180 + 64156825 ctgggtctcccaaagtgctaggattgcgggtgggagctaccacacccagccTGCGATCAGTTTAAGATCAGCCTTGCTTACTCTCATGTTCCCTTTTATCTTCCTGGTAGCAtttttgttttgtctt----cagagtttctcccttgtcgcccaggctggagtgcactggcgtgatcttggctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55773887 180 + 59248254 ctgggtctcccaaagtgctaggattacaggtgggagctaccacacccagccTGCGATCAGTTTAAGATCAGCCTTGCTTACTCTCATGTTCCCTTTTATCTTCCTGGTAGCAtttttgttttgtctt----cagagtttctcccttgtcgcccaggctggagtgcaatggcgtgatcttggctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878272 180 + 51301725 ctgggtctcccaaagcgctaggattcgAGGTgggagctaccacacccagcctgtgatCAGTTTAAGATCAGCCTTGCTTACTTTCACGTTCCCTTTTATCTTCCTggtagcatttttgttttgtctt----cagaGTTTCTcccttgtcgcccaggccggagtgcaatggcgtgatcttggctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47586583 180 + 50890351 ctgggtctcccaaagtgctaggattacaggtgtgagctaccacacccagccTGTGATCAGTTTAAGATCAGCCTTGCTTACTCTCATGTTCCCTTTTATCTTCCTGGTAGCAtttttgttttgtctt----cagagtttctcccttgtcacccaggctggagtgcaatggcgtgatcttggctc i chlSab2.chr6 C 0 I 2936 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I a score=491456.000000 s hg38.chr19_GL949747v2_alt 624618 232 + 729520 gccacaacctccacctcccaggttcaagtgatt---ctgcctcagcctcccgagtagctgggatcataggcgcccaccaccacatctggctaatttttgc------------------------------------atttgttagttttatttttagtag--acagggtttcaccatgttgggcaggctggtcttgaactcctgacctcaggtgatccacccacttcggcctcccaaagtgc-tgggattacaggcatgagccaccgtacctag s panTro4.chr19 59893282 228 + 63644993 gccacaacctccacctcccaggttcaagtgatt---ctgcctcagcctcctgagtagctgggatcataggcgcccaccaccacatctggctaatttttgc------------------------------------atttgtt----ttatttttagtag--acagggtttcaccatgttgggcaggctggtcttgaactcctgacctcaggtgatccacccacttcggcctcccaaagtgc-tgggattacaggcatgagccaccgtacctag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822212 231 + 60714840 accacaacctccacctcccaggttcaagtgatt---ctgcctcagcctcccgagtagctgggatcataggcgcccaccaccacatctggctaatttttgc------------------------------------atttttta---gtatttttagtagacacagagtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccacctcggcctcccaaagtgc-tggaattacaggcatgagccaccgtacctag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103335821 235 - 106955855 accacaacctccacctcccaggttcaagtgatt---ctgccgcagcctcccgagtagctgggatcataggcgcccaccaccacatctggctaatttttgc------------------------------------attttttagttttatttttagtagacgcagggtttcaccatgttggccaggctggtcttgaactcctgagctcaggtgatccacccccctcggcctcccaaagcgcttgggattacaggcgtgagccaccgtgcctgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60633086 230 + 64156825 accacaacctccacctcccagattcaagcgattcttctgcctcagcctcccaagtagctgggattataggcgcccaccaccacaactgactaa-------------------------------------------ttttttttttttttttttgtgtagacatagggtctcaccgtgtttgtcaggctggtctcaaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgc-taggattacaggtgtaagccactgtacctag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55774067 273 + 59248254 accacaacctccacctcccagattcaagcgattctcctgcctcagcctcccaagtagctgggattataggcgcccaccaccacatctggctaattttttttttcttttttttttttttcttctttttcttttttttttttttttttttttttttttgtagacatagggtctcgccgtgtttgtcaggctggtctcaaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgc-taggattacaggtgtaagccactgtacctag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878452 250 + 51301725 accacaacctccacctcccaggttcaagcgattctcctgcctcagcctcccaagtagctgggattataggtgcccaccaccacatctggctaagttttttttctttttctttt-----------------------tctttttttttttttttttagtagacatagggtctcgccgtgtttgtcaggctggtctcaaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgc-taggattacaggtgtaagccactgtacctag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47589699 239 + 50890351 accacaatctccacctcccaggttcaagcgattctcctgcctcagcctcccaagtagctgggattataggcgcccaccaccacatctggctaattttttttt----------------------------------tttttttttttttttttttagtagacatagggtctcgccatgtttgtcaggctggtctcaaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgc-taggattacaggtgtaagccactgtacctag i chlSab2.chr6 I 2936 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I a score=321473.000000 s hg38.chr19_GL949747v2_alt 624850 120 + 729520 ccCACATTGAC-TTTTGATACAGCAAGTA---------TTTCTTGCTATGGCTCTGTATAATAGAGGTGAGTAACTTGGTTGAAGGAATTGTTTGCCCTGTTCATCTCTCTAGACACGGCCAATGTCATT s panTro4.chr19 59893510 120 + 63644993 ccCACATTGAC-TTTTGATACAGCAAGTA---------TTTCTTGCTATGGCTCTGTATAATAGAGATGAGTAACTTGGTTGAAGGAATTGTTTGCCCTGTTCATCTCTCTAGACCCGGCCAATGTCATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822443 118 + 60714840 ccCACATTGGC---TTGATACAGCAAGTA---------TTTCTTGTTATGGCTCTGTATGATAGAGGTGAGTAACTTGGTTGAAGGAATTGTTTGCCCTGTTCATCTCTCTAGACCCGGCCAATGTCATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336056 120 - 106955855 tcCACATTGAC-TTTTGATATAGCAAGTA---------TTTCTTGCTATGGCTCTGTAGAATAGAGGTGAGTAACTTGGTTGAAGGAATTGTTTGCCCTGTTCATCTCTCTAGACCTGGCCAATGTCATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60633316 120 + 64156825 ccCACATTGAC-TTTTGATAGAGCAAGTA---------TTTCTTGTTATGGCTCTGTAGAATACAGGTGAGTAACTTGGTTGAAGGAATTGTTTGCCCTGTTCATCTCTCTAGACTTGGCCAATGTCATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55774340 120 + 59248254 ccCACATTGAC-TTTTGATAGAGCAAGTA---------TTTCTTGTTATGGCTCTGTAGAATACAGGTGAGTAACTTGGTTGAAGGAATTGTTTGCCCTGTTCATCTCTCTAGACGTGGCCAATGTCATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878702 120 + 51301725 cccaCATTGAC-TTTTGATAGAGCAAGTA---------TTTCTTGTTACGGCTCTGCAGAATAGAGGTGAGTAACTTGGTTGAAGGAATCGTTTGCCCTGTTCATCTCTCTAGACATGGCCAATGTCATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47589938 120 + 50890351 ccCACATTGAC-TTTTGATAGAGCAAGTA---------TTTCTTGTTACGGCTCTGTAGAATAGAGGTGAGTAACTTGGTTGAAGGAATCGTTTGCCCTGTTCATCTCTCTAGACATGGCCAATGTCATT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20044745 127 - 122678785 cTCACATTGATTTTTTGATAGAGCAATTAGAACAAATGTTTATTGTTATAGTTCCACAGAGGAGAGGCATGTAACTTGGTTTAGAATGTCATTTGCTCTGTTCATCTCTATAAACCTATCTGTCGCC--- i canFam3.chr1 I 1335 C 0 e calJac3.chr22 45941225 398 + 49145316 I a score=14227.000000 s hg38.chr19_GL949747v2_alt 624970 9 + 729520 CCTGGCACA s panTro4.chr19 59893630 9 + 63644993 CCCGGCACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822561 9 + 60714840 CCCAGCACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336176 9 - 106955855 CCCAGCACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60633436 9 + 64156825 CCCAGCACA i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47590058 9 + 50890351 CCCAGCACA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20044872 9 - 122678785 CCTGCCACA i canFam3.chr1 C 0 I 62 e calJac3.chr22 45941225 398 + 49145316 I e papAnu2.chr19 47878822 0 + 51301725 C e macFas5.chr19 55774460 0 + 59248254 C a score=4114.000000 s hg38.chr19_GL949747v2_alt 624979 6 + 729520 CAATC-----t s panTro4.chr19 59893639 6 + 63644993 CAATC-----t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822570 11 + 60714840 CAATCtttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336185 10 - 106955855 CAATC-ttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60633445 6 + 64156825 CAATC-----T i rheMac3.chr19 C 0 I 1 s chlSab2.chr6 47590067 6 + 50890351 CAATC-----T i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e papAnu2.chr19 47878822 0 + 51301725 C e macFas5.chr19 55774460 0 + 59248254 C a score=150209.000000 s hg38.chr19_GL949747v2_alt 624985 289 + 729520 ttttttttcttgagatggagtctcactctgttgcccagactggagtgcagtggtgcaatcttggcccactgcaacctctgctacccaggttcaagcgattctcctgcctcagcctcccaaatagctgggagtacaggtgtgtgccaccacgcccagctaattttttgtattttagtagagacagggtttcaccgtgttagtcaggatggtctggatctcctaacctcgtgatccgtccgcctcagcctcccaaagtgctgggatgacaggcgtgagccactgtgcccag s panTro4.chr19 59893645 289 + 63644993 ttttttttcttgagatggagtctcgctctgttgcccagactggagtgcagtggtgcaatcttggcccactgcaacctctgctacccaggttcaagcgattctcctgcctcagcctcccaaatagctgggagtacaggtgtgtgccaccacgcccagctaattttttgtattttagtagagacagggtttcaccgtgttagccaggatggtctggatctcctaacctcgtgatccgcccgccgtggcctcccaaagtgctgggatgacaggcgtgagccactgtgcccgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822581 289 + 60714840 tttttttttttgagacggagtcttgctctgtcacccagactggagtgcagtggtgcaatcttggcccactgcaacctctgccacccaggttcaagcgattctcctgcctcagcctcccaagtagctgggagtacaggcgtgtgccaccacacccagctgattttttgtattttagtagagacggggtttcaccgtgttagccaagatggtctcaatctcctaacctcgtcatctgtccacctcagcctcccaaagtgctgggatgacaggcgtgagccactgtgcccgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336195 289 - 106955855 tttttttttttgagacagagtcttgctctgtcgcccagactggagtgcagtggtgcaatgttggcccactgcaacttctaccacccaggttcaagcgattctcctgcctcagcctcccaagtagctgggagtacaggcgtgtgccaccacgcccagctaattttttgtattttagtagagacggggtttcaccgtgttagccaggatggtctcaatctcctaacctcgtgatcctcctgcctcggcctcccaaagtgctgggattacaggcgtgatccaccgtgcccgg i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e chlSab2.chr6 47590073 0 + 50890351 C e papAnu2.chr19 47878822 0 + 51301725 C e macFas5.chr19 55774460 0 + 59248254 C e rheMac3.chr19 60633451 1 + 64156825 I a score=18578.000000 s hg38.chr19_GL949747v2_alt 625274 15 + 729520 ccTAGCACACAATCT s panTro4.chr19 59893934 15 + 63644993 ccTAGCACACAATCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822870 15 + 60714840 ccTAACACACAGTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336484 15 - 106955855 ccTAGCACACAACCT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55774460 15 + 59248254 CCCAGCACACAATCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878822 15 + 51301725 CCCAGCACACAATCT i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e chlSab2.chr6 47590073 0 + 50890351 C e rheMac3.chr19 60633451 1 + 64156825 I a score=1179.000000 s hg38.chr19_GL949747v2_alt 625289 1 + 729520 T s panTro4.chr19 59893949 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822885 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336499 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55774475 1 + 59248254 C i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878837 1 + 51301725 T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47590073 1 + 50890351 T i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e rheMac3.chr19 60633451 1 + 64156825 I a score=197263.000000 s hg38.chr19_GL949747v2_alt 625290 92 + 729520 GACAAAGAATTTCGGTGCGACTTGGGGTACTGTGGTGCCTGCTCTATCATCATGCTTCAGCA------GGAAATGTGGGTGAATAGTGCCTGGTGGCA s panTro4.chr19 59893950 92 + 63644993 GACAAAGAATTTCGGTGCGACTTGGGGTACTGTGGTGCCTGCTCTATCATCATGCTTCAGCA------GGAAATGTGGGTGAATAGTGCCTGGTGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822886 92 + 60714840 GTCAAAGAATTCCAGTGCGACTTGGGGTACTGTGGAGCCTGCTCTATCATCATGCTTCAGCA------GGAAATGTGGGTGAACAGTGCCTGGTGGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336500 92 - 106955855 GACAAAGAATTCCGGTGCGACTTGGGGCACTGTGGAGCCTGCTCCATCATCATGCTTCAGCG------GGAAATGTGGATGAACAGTGCctggtggca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60633452 91 + 64156825 GACAAAGAATTCCAGTGAGACTGGGGGCACTGTGGAGCCTGCTGTCT-GTCATGCTTCAGCA------GGAAATGGGGGTGAATAGTGCTTggtggca i rheMac3.chr19 I 1 I 3 s macFas5.chr19 55774476 91 + 59248254 GACAAAGAATTCCAGTGAGACTGGGGGCACTGTGGAGCCTGCTGTCT-GTCATGCTTCAGCA------GGAAATGGGggtgactagtgcttggtggca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878838 97 + 51301725 GACAAAGAATTCCAGTGAGACTGGGGGCACTGTGGAGCCTGCTGTCT-GTCATGCTTCAGCAGGAAATGGAAATGGGGGTGAATAGTGCTTGGTGGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47590074 91 + 50890351 GACAAAGAATTCCAGTGAGACTGGGGGCACTGTGGAGCCTGCTGTCT-GTCATGCTTCAGCA------GGAAATGGGGGTGAACAGTGCTTggtggca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I a score=3075.000000 s hg38.chr19_GL949747v2_alt 625382 3 + 729520 TGG s panTro4.chr19 59894042 3 + 63644993 TGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822978 3 + 60714840 TGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336592 3 - 106955855 tgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55774567 3 + 59248254 cga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878935 3 + 51301725 CGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47590165 3 + 50890351 cga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e rheMac3.chr19 60633543 3 + 64156825 I a score=9292.000000 s hg38.chr19_GL949747v2_alt 625385 12 + 729520 CAGGTAAAGAAA s panTro4.chr19 59894045 12 + 63644993 CAGGTAAAGAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822981 12 + 60714840 TGGGTAAGGAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336595 12 - 106955855 tgggtaaagaaa i nomLeu3.chr10 C 0 I 608 s chlSab2.chr6 47590168 12 + 50890351 cgggtaaagaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e papAnu2.chr19 47878938 0 + 51301725 C e macFas5.chr19 55774570 0 + 59248254 C e rheMac3.chr19 60633543 3 + 64156825 I a score=546.000000 s hg38.chr19_GL949747v2_alt 625397 1 + 729520 T s panTro4.chr19 59894057 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822993 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47590180 1 + 50890351 t i chlSab2.chr6 C 0 T 3383 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103336607 608 - 106955855 I e papAnu2.chr19 47878938 0 + 51301725 C e macFas5.chr19 55774570 0 + 59248254 C e rheMac3.chr19 60633543 3 + 64156825 I a score=77455.000000 s hg38.chr19_GL949747v2_alt 625398 298 + 729520 Gttttgttttgtttttttttttgagacagtcttgctctgtcacccaagctggagtgcagtggcgcaatctcggctcactgcaagctccatctcccgggttcacgccatt---ctgcctcagcctccccagtagctgggactacaggcgcccgccacacgcccggctaattttttgtatttgtagtagagacagggtttcaccgtgttagccaggatggtctcgatctcctgaccttatgatccacccgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagccG s panTro4.chr19 59894058 296 + 63644993 Gtttttgttt--ttttttttttgagacagtcttgctctgtcacccaagctggagtgcagtggcgcgatctcggctcactgcaagctccgtctcccgggttcacgccatt---ctgcctcagcctccccagtagctgggactacaggcgcctgccacacgcccggctaaatttttgtatttgtagtagagacagggtttcaccgtgttagccaggatggtctcgatctcctgaccttatgatccacccgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagccA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822994 299 + 60714840 Gttttttttt--ttttttttttgagacagtcttgctctgtcgcccaggctggagtgcagtggcgcaatctcagatcactgcaagctccgcctcctgggttcacgccattctcctgcctcagcctccccagtagctgggactacaggcgcccgccacacgcccagctagttttttgtatttttagtagagacagggtttcaccgtgttagccaggatggtcttgatctcctgaccttgtgatccgcctgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagccG i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103336607 608 - 106955855 I e chlSab2.chr6 47590181 3383 + 50890351 T e papAnu2.chr19 47878938 0 + 51301725 C e macFas5.chr19 55774570 0 + 59248254 C e rheMac3.chr19 60633543 3 + 64156825 I a score=481905.000000 s hg38.chr19_GL949747v2_alt 625696 387 + 729520 Cgggtaaagaaatttatgaagacaatcgtaggtaaaggaaggcagatttattggagaaagtaggaaaagacattggcagagagaccccagcgggcaggttgtcatgag--tagctcactgccaggagaccaaagcttcctgcagattttatagaatagggcttgggctgattgataat-----gtcaacagggggtttaacttgcggtcttctttcagcagaagtgtttgataaactgaggcgtttcatggcaaacagggagtttgtg---agctctgtgtgtgatctggccaggaaggccaaacatcttgggccg-tatctcctggaccataaaagcagacctggcccagtgcagtggttcatgcctgcaatcccagcactttgggaggctgaggtg s panTro4.chr19 59894354 389 + 63644993 Cgggtaaagaaatttatgaagacaatcgtaggtaaaggaaggcagatttattggagaaagtaggaaaagacattagcagagagactccagcgggcaggttgtcatgagagtagctcactgccaggagaccaaagcttcctgcagattttatagaatagggcttgggctgattgataat-----gtcaacagggggtttaacttgcagtcttctttcagcagaagtgtttgataaactgaggcgtttcatggcaaacagggagtttgtg---agctctgtgtgtgatctggccaggaaggccaaacatcttgggccg-tatctcctggaccataaaagcagacctggcccagtgcagtggttcacgcctgtaatcccagcactttgggaggctgaggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56823293 390 + 60714840 CAggtaaagaaatttatgaagacaatcgtaggtaaacaaaggcagatttattggagaaagtaggaaaagacattggcagagagaccacagcaggcaggttgtcatgagagaagctcactgccaggagaccaaagcttcctgcagattttatagaatagggcttgggctgattgataat-----gtcaacagggggtttaacttgcagtcttctttcagcagaggtgtttgataaactgaggcgtttcatggcaagcagggagtttgtg---agctctgtgtgtgatctggccaggaaggccaaacatcttgggccgtTATCTCCTGGACCATAAAAGCAGACCTggcccagtgcagtggttcatgcctgtaatcccagcacttagggaggccgaggtg i ponAbe2.chr19 C 0 I 521 s rheMac3.chr19 60633546 392 + 64156825 cgggtaaagaaatttatcaagacaatcgtatgtaaagaaaggcagatttattggagaaagtaggagaagacattggc----agaccacagcaggcaggctgtcacgggagaaactcactgccaggagaccacagcttcctgcagattttatagaatagggcttgggctgattgataaggtcaagtcaacaggcggtttaacttgccatcttccttcagcagacatgtttgataaactgaggcgtttcatggcaagcagggagtttgtgagcagctgtgtgtgtgatctggtcaggaaggctaaacatcttggacca-tatctcctggaccataaaagcagacctggcccggcacagtggttcaca-ctgtaatcccagcactttgggaggctgaggtg i rheMac3.chr19 I 3 C 0 s macFas5.chr19 55774570 392 + 59248254 cgggtaaagaaatttatcaagacaattgtatgtaaagaaaggcagatttattggagaaagtaggagaagacattggc----agaccacagcaggcaggctgtcacgggagaaactcactgccaggagaccacagcttcctgcagattttatagaatagggcttgggctgattgataaggtcaagtcaacaggcggtttaacttgccatcttccttcagcagacatgtttgataaactgaggcgtttcatggcaagcagggagtttgtgagcagctgtgtgtgtgatctggtcaggaaggctaaacatcttggacca-tatctcctggaccataaaagcagacctggcccggcacagtggttcaca-ctgtaatcccagcactttgggaggctgaggtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878938 393 + 51301725 CGGGTAAAGAAATTTATCAAGACAATcataggtaaagaaaggcagatttattggAGAAAGTAGGAGAAGACATTGGC----AGACCACAGCAGGCAGGCTGTCACGAGAGAAGCTCACTGCCAGGAGACCACAGCTTCCTGCAGATTTTATAGAATAGGGCTTGGGCTGATTGATAAGGTCAAGTCAACAGGCGGTTTAACTTGCCATCTTCCTTCAGCAGACGTGTTTGATAAACTGAGGCGTTTCATGGCAAGCAGGGAGTTTGTGAGCAGCTGTGTGTGTGATCTGGTCAGGAAGGCTAAACATCTTGGACCA-TATCTCCTGGACCATAGAAGCAGACCTGGCccggcgcagtggttcacacctgtaatcccagcactttgggaggctgaggtg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103336607 608 - 106955855 I e chlSab2.chr6 47590181 3383 + 50890351 T a score=194839.000000 s hg38.chr19_GL949747v2_alt 626083 234 + 729520 ggtggatcatctgaggtcagcagttttagactggcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagcctagacgcagtggcacatgcctgtaattccagttacttgggaagctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagattgcgccactgcactccagcctgggcaacagagtgagactgtctcaaacaga---------- s panTro4.chr19 59894743 234 + 63644993 ggtggatcacctgaggtcagcagttctagactggcctggccaacatggcgaaaccccgtctctactaaaaatacaaaaattagcctagacgcagtggcacatgcctgtaattccagttactcgggaagctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagattgcgccactgcactccagcctgggcaacagagtgagactgtctcaaacaga---------- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60633938 241 + 64156825 ggtggatcacctgaggtcagtagttctagaccggcctggccaacatgacgaaaccccgtctctactaaaaatacaaaaattagcc-agacgcagtggcgcatgtctataattccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcagtgagccaagattgcgccactgcattccagcctgggcaac--agtgagactgtctcaaaaaaaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55774962 241 + 59248254 ggtggatcacctgaggtcagtagttctagaccggcctggccaacatgacgaaaccccgtctctactaaaaatacaaaaattagcc-agacgcagtggcgcatgtctgtaattccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcagtgagccaagattgcgccactgcattccagcctgggcaac--agtgagactgtctcaaaaaaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47879331 240 + 51301725 ggtggatcacctgaagtcagtagttctagaccggcctggccaacatgacgaaaccctgtctctactaaaaatacaaaaattagcc-cgacgcagtggctcatgtctgtaatcccagctactcgggaggccgaggcaggagaatcacttgaacccgggaggcggaggttgtagtgagccaagattgccccactgcactccagcctgggcaac--agtgagactgtctc-aaaaaaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e ponAbe2.chr19 56823683 521 + 60714840 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103336607 608 - 106955855 I e chlSab2.chr6 47590181 3383 + 50890351 T a score=74384.000000 s hg38.chr19_GL949747v2_alt 626317 70 + 729520 cctatagctgacctgtttcctcttgtttgtatgccctgaaccatggaggaaagcttatttatttatttta s panTro4.chr19 59894977 70 + 63644993 cctatagctgacctgtttcctcttgtttgtatgccctgaaccatggaggaaagcttatttatttatttta i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60634179 62 + 64156825 cctatagctgacctgtttcctcttgtttgtatgttctaaaccatggaagaaagcttgttttt-------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55775203 62 + 59248254 cctatagctgacctgtttcctcttgtttgtatgttctaaaccatggaagaaagcttgttttt-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47879571 62 + 51301725 cctgtagctGACCTGTTTCCTCTTGTTTGTATGTTCTAAACCATGGAAGAAAGCttgtttta-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47586798 62 + 50890351 CCTATAGCTGACCTGTTTCCTCTTGTTTGTATGTTCTAAACCATGGAAGAAAGCttgtttta-------- i chlSab2.chr6 T 3383 C 0 e canFam3.chr1 20044881 62 - 122678785 I e ponAbe2.chr19 56823683 521 + 60714840 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103336607 608 - 106955855 I a score=150873.000000 s hg38.chr19_GL949747v2_alt 626387 120 + 729520 ttgag--atggagtcttgctctgttgcccagggtggagtgcagtagtgcgatctcttactacaacctccatctcccaggttcaagcaattctcgagcctcttggcctcccaagtagctgaga s panTro4.chr19 59895047 120 + 63644993 ttgag--atggagtcttgctttgttgcccagggtggagtgcagtagtgcgatctcttactacaacctgcacctcccaggttcaagcaattctcgagcctcttggcctcccaagtagctgaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56824204 120 + 60714840 ttgag--atggagtcttgctctgttgcccagggtggagtgcagtagtgtgatctcttactgcaacctccacctcccaggttcaagcaattctcgagcctctcggcctcccaagtagctgaga i ponAbe2.chr19 I 521 C 0 s rheMac3.chr19 60634241 86 + 64156825 ttgag--atggagtattgctctgttgcccaggctggagcgctg------gatctcttactgcaac-------------------------ctcgcgtctctcagcctcccaagtagctg--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55775265 86 + 59248254 ttgag--atggagtattgctctgttgcccaggctggagcgctg------gatctcttactgcaac-------------------------ctcgcgtctctcaacctcccaagtagctg--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47879633 111 + 51301725 ttgag--atggagtattgctctgttgcccaggctggagcgctg------gatctcttactgcaacctccacctcccaggttcaagcaattctcacgcctctcagcctcccaagtagctg--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47586860 113 + 50890351 ttgagatatggagtattgctctgttgcccaggctggagcgctg------gatctcttactgcaacctccacctcccaggttcaagcaattctcgcacctctcagcctcccaagtagctg--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103336607 608 - 106955855 I a score=116766.000000 s hg38.chr19_GL949747v2_alt 626507 64 + 729520 ttacaggcatgcgccaccacgcctggctaatttttgcatttttagtagagatggggtttctgtg-- s panTro4.chr19 59895167 64 + 63644993 ttacaggcatgcgccaccacgcctggctaatttttgcatttttagtagagatggggtttctgtg-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56824324 64 + 60714840 ttacaggcgtgtgccaccacgcctggctaatttttgcatttttagtagagatggggtttctgtg-- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60634327 55 + 64156825 ---------tgcaccactacgcctggctactttttgcatttttagtaaagacggggtttctctg-- i rheMac3.chr19 C 0 I 2 s macFas5.chr19 55775351 55 + 59248254 ---------tgtaccactacgcctggctactttttgcatttttagtaaagacggggtttctctg-- i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47879744 55 + 51301725 ---------tgcaccactacgcctggctactttttgcatttttggtaaagacggggtttctctg-- i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 47586973 55 + 50890351 ---------tgcaccactacgcctggctactttttgcatttttagtaaagacggggtttctctg-- i chlSab2.chr6 C 0 I 2 s calJac3.chr22 45941623 66 + 49145316 ttaaaggctcacaccaccacacttggctaatttttgtatttttagtagatatggagtttctccatg i calJac3.chr22 I 398 C 0 e canFam3.chr1 20044881 62 - 122678785 I e nomLeu3.chr10 103336607 608 - 106955855 I a score=465551.000000 s hg38.chr19_GL949747v2_alt 626571 196 + 729520 ttggccaggctggtctcgaactcctgagctcaagtgatccaccccacctcagcctcccaaagttctgggattataggcatgagc-----caccacacctggccggaaaacacatttgtagcttatttgctttatctgatcccgtgccccc-----cctcccccccgccccatcagcctgcctccttttctctaattgggactccac s panTro4.chr19 59895231 200 + 63644993 ttggccaggctggtctcgaactcctgagctcaagtgatccaccc-acctcagcctcccaaagttctgggattataggcatgaac-----caccacacctggccggaaaacacatttgtagcttatttgctttatctgatcccgcgccccctgccccccccccccacccccatcagcctgcctccttttctctaattgggactccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56824388 185 + 60714840 ttggccaggctggtctccaactcctgagctcaagtgatccaccc-acctcagtctcccaaagttctgggattataggcatgagc-----caccacacctggccggaaaacatatttgtagcttatttgctttatctgatt---------------ctcgccccccgccccatcagcctgactccttttctctaattgggactccac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103337215 186 - 106955855 ttggccagggtggtctcgaactcctgagctcaagtgatccgccc-acctcagccttccaaagtgctgggattataggcatgagc-----caccacgcctggccAGaaaacatatttgtagcttgtttgctttatctgtttt--------------ctcccccggggtcctgtcagcctgactccttttccctaattgggactccac i nomLeu3.chr10 I 608 C 0 s rheMac3.chr19 60634384 184 + 64156825 ttggccaggctggtctggagctcctgagctcaagtgatccgccc-acctcagcttcccaaagtgctgggattagagacatgagc-----cgtcacacctggccggaaaacatatttgtagctcacttgctttatctgtt----------------tctccagctggtcctgtcagcttcactccttttccctcactgggactccac i rheMac3.chr19 I 2 C 0 s macFas5.chr19 55775408 184 + 59248254 ttggccaggctggtctggagctcctgagctcaagtgatccgccc-acctcagcttcccaaagtgctgggattagagacatgagc-----cgtcacacctggccggaaaacatatttgtagctcacttgctttatctgtt----------------tctccagctggtcctgtcagcttcactccttttccctcattgggactccac i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47879801 184 + 51301725 ttggccaggctggtctggaactcctgagctcaagtgatccgccc-acctcagcttcccaaagggctgggattagagacatgagc-----cgTCACACCTGGCCGGAAAACATACTTGTAGCTCACTTGCTTTATCTGTT----------------TCTCCAGCTGGTCCTGGTAGCTTCACTCCTTTTCCCTCATTGGAACTCCAC i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47587030 189 + 50890351 ttggccaggctggtctggaactcccgagctcaagtgatccgccc-acctcagcttcccaaagtgctgggattagagacatgagcACTTTAGTCACACCTGGCTggaaaacatatttgtagctcacttgctttatctgtt----------------tctccagctggtcctgtcagcttcactccttttccctcactgggactccac i chlSab2.chr6 I 2 C 0 s calJac3.chr22 45941689 180 + 49145316 ttggccaggctggtctcgaactccggagctcaagtgatctgccc-acctcggcctccgaaaatattgggattataggcatgagc-----cactgcaccGAGCTggaagac--atttataacttatttgctctatctgt-----------------tgccctctgggtcctgtcagc-tgactccttttccctgtttgggactccac i calJac3.chr22 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I a score=569806.000000 s hg38.chr19_GL949747v2_alt 626767 213 + 729520 aGGAAATACACCTGATTTTGTGTCAATCTCACATGAGTTTGTATTTTGTAGCGTTTACAGAAACG---AAA---GGAAATGTCATCTGCCTGGGTAAA------GAAGTCT------TTAAAGGAAAAAAGCCAGGTCTGTACCATATCTTCCTGCAGGG---AGCTTGGGATCAGATTTCTCTTTATAAACTTGAAGTCCTCTTA--ACTTTCCTATGTAACACAAAGCatt------------tat s panTro4.chr19 59895431 213 + 63644993 aGGAAATACACCTGATTTTGTGTCAAGCTCACATGAGTTTGTATTTTGTAGCGTTTCCAGAAACG---AAA---GGAAATGTCATCTGCCTGGGTAAA------GACGTCT------TTAAAGGAAAAAAGCCAGGTCTGTACCATATCTTCCTGCAGGG---AGCTTGGGATCAGGTTTCTCTTTATAAACTTGAAGTCCTCTTA--ACTTTCCTATGTAACACAAAGCATT------------TAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56824573 220 + 60714840 GGGAAATACACCTGATTTTGTGTCACGCTCACATGAGTTTGTATTTTGTAGCATTTACAGAAACC---AAAGAGGGAAATGTCACCTGCCTGGGTAAA------GAAGTCT------TTAAAGGAGAAAAGCCAGGTCTGTACCATATCTTCCTGCAGTG---AGCTTGGGATCAGGTTTCTCTTTATAAACTTGAAGTCCTCTTA--ATTTTCCTATGTAACACAAAGCATTtat--------gtat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103337401 212 - 106955855 aGGAAATACACCTGATTTTGTGTCAAGCTCACATGAGTTTGTATTTTGTAGCGTTTACAGAAACG---GAG---GAAGATGTCACCTGCCTGACTAAA------GAAGTCT------TTAAAGGAGAAAAGCCAGGTCTGTACCATATCTTCCTGCAGTG---AGCTTGGGATCAAGTTTCTCTTTATAAACTTGAAGTCCTCTTA--ACTTTCCTATGTGACACAAAGCAT-------------TAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60634568 228 + 64156825 aGGAAATACACCTGATTTTGTGTCACGTTCACATGAGTTTGTATTTTGTAGAGTGCACAGAAACA---GAG---GAAGACGTCACCGTCCTGACT---------GAAGTCTTCAAAGTCAAAGGAGAAAAGTCAGGTCTGTACTGTATCTTCCTGCAGTG---AGGTTGGGATCAGGTTTCTCTTTATAAACTTGAAGTCCTCTTA--ACTTTCCTATGTAACACAAAGCGtgtatgtatgtacgtgt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55775592 228 + 59248254 aGGAAATACACCTGATTTTGTGTCACGTTCACATGAGTTTGTATTTTGTAGAGTGCACAGAAACA---GAG---GAAGACGTCGCCGTCCTGACT---------GAAGTCTTCAAAGTCAAAGGAGAAAAGTCAGGTCTGTACCGTATCTTCCTGCAGTG---AGGTTGGGATCAGGTTTCTCTTTATAAACTTGAAGCCCTCTTA--ACTTTCCTATGTAACACAAAGCGtgtatgtatgtatgtgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47879985 228 + 51301725 AGGAAATACACCTGATTTTGTGTCACGTTCACATGAGTTTGTATTTTGTAGAGTGCACAGAAACA---GAG---GAAGACGTCACCGTCCTGACT---------GAAGTCTTCAAAGTCAAAGGAGAAAAGTCAGGTCTGTACCGTATCTTCCTGCAGTG---AGGTTGGGATCAGGTTTCTCTTTATAAACTTGAAGTCCTCTTA--ACTTTCCTATGTAACACAAAgcgtttatgtatgtatgtat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47587219 228 + 50890351 aGGAAATACACCTGATTTTGTGTCACGTTCACATGAGTTTGTATTTTGTAGAGTGCACAGAAACA---GAG---GAAGACGCCACCGTCCTGACT---------GAAGTCTTCAAAGTCAAAGGAGAAAAGTCAGGTCTGTACTATATCTTCCTGCAGTG---AGGCTGGGATCAGGTTTCTCTTTATAAACTTGAAGTCCTCTTA--ACTTTCCTATGTAACACAAAGCGtgtatgtatgtatgtat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45941869 196 + 49145316 aGGAAATTCACCTGTTTTTGTGTCAAGCTTACATGAGTTTGTACTTTTTCGCGTTTACAGAAACA---GAG---GAAGATGTCAGCAGCCTGAGAGAAGC---TGAAGCCT------TGAAAAAAGAAATGCCAGGTCTGTATCCTGTCTTCCTGGGGTGAGCAGCTTGGGGTCAGGTTTCGCTTTCTAAACTTCAAGTCCttttt--ttttt----------------------------------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 20044943 215 - 122678785 AAGAAATTCACAT--TTTTGTGTCATGCTCACTTTAATTTGTATTTTGCAGCATTTACACAAGTACAGGAA---GAAGATGTCACAAATCCAGAAGAAGCAAAGGAAGGTT------TGAAAGGAGAAAAGCCAGGTCTGTATCCTATCTTCCTGGA-TG---AGCTTAGTGTCAGGTAGTTCTTGATAACTT-----CTCTATTATCATGTTCTTACTTGACAC-AGGTATTTTT------------ i canFam3.chr1 I 62 C 0 a score=844500.000000 s hg38.chr19_GL949747v2_alt 626980 324 + 729520 ttatgtatgtatgt----atCgagacggagttttgctcttgttgcccaggctggagtgccgtggcgtgatctcgactcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccatgactggctaattttt-tatttttagtagagacaaggtttcttcatgttggtcaggctggtgttgaactcccaatgtcaggtgatctgcctgcctcgacctcccaaagggctgggattacaggcatgagccactgtgcccggcc---------------------------AACACAAGGCATTTTGTTATTTTGG s panTro4.chr19 59895644 324 + 63644993 TTATGTATGTATGT----ATCgagacggagttttgctcttgttgcccaggctggagtgccatggcgtgatctcgactcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccatgactggctaattttt-tgtttttagtagagacaaggtttctttatgttggtcaggctggtgttgaactcccaatgtcaggtgatgtgcctgcctcgacctcccaaagggctgggattacaggcatgggccactgtgcccggcc---------------------------AACACAAGGCATTTTGTTATTTTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56824793 324 + 60714840 gtatgtatgtatgt----atCgagacggagttttgctcttgttgtccaggctggagtgccgtggcatgatcttgactcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctcccgagtagctggaattacaggcctgcgccaccatgaccggctaattttt-aatttttagtagagacaaggtttcttcatgttggtcaggctggtcttgaactcccaatgtcaggtgatctgcctgcctcggcctcccaaagggctgggattacaggcatgagccaccgcgcccggcc---------------------------AACACAAGGCATTTTGTTATTTTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103337613 324 - 106955855 TGATGTATGTATGT----ATCgagatggagtttcgctcttattgcccaggctggagtgccgtggcgtgatctcgactcactgcaacctctgcctcccaggttcaagcgattcgcctgcctcagcctcccaagtagctgggattacaggcatgcaccaccatgaccggctaatgttt-tatttttagcagagacaaggtttcttcatgttggtcaggtcggtcttgaactcccaacctcaggtgatctgcctgcctcagcctccgaaagggctgggattacaggcatgagccaccgcgcccggcc---------------------------AACACAAGGCATTTTGTTATTTTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60634796 319 + 64156825 gtatatatgtatgt----attgagacacagtttcactcttgttgcccaggctggagtgccatggcatgatctctgttcactgcaacctccgtctcccaggttcaagcaatt---ctgcctcagcctcccgagtagctgggaatacaggcgtgctccaccacacccagctaacttat---tttttagtagagacaaggtttcttcatgttggtcaggctggtcttgaactcccaacctcaggtgatcggcctgcctcggcctcccaaagggctgggattacaagtgtgagcccccgcgcccagcc---------------------------AACACAAGACATTTTGTTGTTCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55775820 319 + 59248254 gtatatatgtatgt----attgagacacagtttcactcttgttgcccaggctggagtgccatggcatgatctctgttcactgcaacctccgtctcccaggttcaagcaatt---ctgcctcagcctcccgagtagctgggaatacaggcgtgctccaccacacccagctaacttat---tttttagtagagacaaggtttcttcatgttggtcaggctggtcttgaactcccaacctcaggtgatcggcctgcctcggcctcccaaagggctgggattacaagtgtgagccaccgcgcccagcc---------------------------AACACAAGACATTTTGTTGTTCTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47880213 323 + 51301725 gtatatatgtatgtatgcattgagacacagtttcactcttgttgcccaggctggagtgccatggcatgatctctgctcactgcaacctccgtcttccaggttcaagcaatt---gtgcctcagcctcccaagtagctgggaatacaggtgtgctccaccacacccagctaacttat---tttttagtagagacaaggtttcttcatgttggtcaggctggtgttgaactcccaacctcaggtgatcggcctgcctcggcctcccaaagggctgggattacaagtgtgagccaccgcgcccagcc---------------------------aacacaaGGCATTTTGTTGTTCTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47587447 319 + 50890351 gtatatatgtatgt----attgagacacagtttcactcttgttgcccaggctggagtgccatggcatgatctctgctcactgcaacctccgtctcccaggttcaagcaatt---gtgcctcagcctcccgagtagctgggaatacaggcgtgctccaccacacccagctaacttat---tttttagtagagacaaggtttcttcatgttggtcaggctggtcttgaactcccaacctcaggtgatctgcctgcctcggcctcccaaagggctgggattacaagtgtgagccaccgcgcccagcc---------------------------AACACAAGGCATTTTGTTGTTCTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45942065 321 + 49145316 -------------t----a-----atggagtctcactc-tgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaacctccgcctcctgggttcaaagaattct-ctgcctcagcctcccaagaagctgggactataggc--gcaccaccacgcccagctaatttttgtatttttagtagaggtggggtttcgccatgttggtcaggctggtcttgaacttctgaccc---gtgaactgcccgcctccgcctcccaacgtgctgggattacaggtgtgagccgccgcactcggccTCAAGTCCTCTTTTTACGCTCCTGTGTAACGGAAAGCA------TGCTTTGT i calJac3.chr22 C 0 C 0 e canFam3.chr1 20045158 0 - 122678785 C a score=980283.000000 s hg38.chr19_GL949747v2_alt 627304 305 + 729520 TTTTCCCTATGGGTAACTGATTGCATC----CTCTCTCCCTTCCCTCCTCACCAATGATAAAGACAAAGACAATAGGTGCAGGTATATATTGAAGACGAAGTTCCGGGAGATGTGGAAGAG------CTGGCCTGGAGATAGCAAAGAGGTCCAGGTTATGGCTGAGAGATACAAGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCATACACGGTGGTGCTGTATGGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCCAGAAACTAATGCTAGACTGGGCAGAGGACAACCTCATCC s panTro4.chr19 59895968 305 + 63644993 TTTTCCCTGTGGGTAACTGATTGCATC----CTCTCTCCCTTCCCTCCTCACCAATGATAAAGACAAAGACAATAGGTGCAGGTATATATTGAAGACGAAGTTCCGGGAGATGTGGAAGAG------CTGGCCTGGAGACAGCAAAGAGGTCCAAGTTATGGCTGAGAGATACAAGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCATACACGGTGGTGCTGTATGGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCCAGAAACTAATGCTAGACTGGGCAGAGGACAACCTCATCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56825117 309 + 60714840 TTTTCCCTATGGGTAACTGATTGCATCCTCTCTCTCTCCCTTCCCTCCTCACCAATGATAAAGACAAAGACAATAGGTACAGGTATATATTGAAGACGAAGTTCCGGGAGATGTGGAAGAG------CTGGCCTGGAGATAGCAAAGAGGTCCAGGTTATGGCTGAGAGATACAAGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCATACACGGTGGTGCTGTATGGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCCAGAAACTAATGCTAGACTGGGCAGAGGACAACCTCATCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103337937 302 - 106955855 TTTTCCCTATGGGTAACTGATTGCATCCTCTGTCTCTCCCTTCCCTCCTCACCAATGAT------AAAGACAATAGGTACAGGTATATATTGAAGACGAAGTTCCGGGAGATGTGGAAGAG------CTGGCCTGGCGATAGCAAAGAGGTCCAGGTTATGGCTGAGAGATACAAGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCCTACACGGTGGTGCTGCACGGTCCTGCA-GCCTTGGGAAAACCACGCTGGGCCCAGAAACTAATGCTAGACT-GGCAGAGGACAACCTCACCC i nomLeu3.chr10 C 0 M 100 s rheMac3.chr19 60635115 297 + 64156825 TTTTCCCTATGGATAACTGATTACATC------CTCTCCCTTCCCTCCTCACCAAAGAT------AACGAGGATAGGTACAGGCTTATACTGAAGACGAAGTTCCGGGAGATGTGGCAGAG------CTGGCCTGGAGACAGCAAAGAGGTCCATGCTATGGCTGAGAGATACAGGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCACACACAGTGGTGCTGCACAGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCAATAAACTAATGCTGGACTGGACAGAGGATGACCTCATCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55776139 299 + 59248254 TTTTCCCTATGGATAACTGATTACATC----CTCTCTCCCTTCCCTCCTCACCAAAGAT------AACGAGGATAGGTACAGGCTTATACTGAAGACGAAGTTCCGGGAGATGTGGCAGAG------CTGGCCTGGAGACAGCAAAGAGGTCCATGTTATGGCTGAGAGATACAGGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCACACACAGTGGTGCTGCACAGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCAATAAACTAATGCTGGACTGGACAGAGGACAACCTCATCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47880536 299 + 51301725 TTTTCCCTATGGATAACTGATTacatc----ctctctcccttccctcctcaccAAAGAT------AACGAGGATAGGTACAGGCTTATACTGAAGACGAAGTTCCGGGAGATGTGGCAGAG------CTGGCCTGGAGACAGCAAAGAGGTCCATGTTATGGCTGAGAGATACAGGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCACACACAGTGGTGCTGCACAGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCAATAAACTAATGCTGGACTGGACAGAGGACAACCTCATCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47587766 299 + 50890351 TTTTCCCTATGGATAACTGATTACATC----CTCTCTCCCTTCCCTCCTCACCAAAGAT------AACGAGAATAGGTACAGGCTTATACTGAAGACGAAGTTCCGGGAGATGTGGCAGAG------CTGGCCTGGAGACAGCAAAGAGGTCCATGTTATGGCTGAGAGATACAGGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCACACACCGTGGTGCTGCACAGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCAATAAACTAATGCTGGACTGGACAGAGGACAACCTCATCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45942386 301 + 49145316 TTTTTGCTGTGAATTACCAATTGCATC--TTGTCTATTCCTTCCCTCCCCACTGAAGGG------AAAGAGGACAGGCACAGGAGCATACTGAAGATGAAGTTCCGGCAGATGTGGGAGGC------CTGGCCCGGAGCCAGCAGAGGGGTCCAAGCTGTGGCTCAGAGATACATGACTCTGATCCCATTCAGCAACCCCAGGATACTTCCCGGGCCCTTCCCACACACGGTGGTGCTCCACGGCCCTGCCGGCCTTGGGAAAACCACGCT-GGCCAAGAGATTAATGTTGGACTGGACAGAGGACAACCTCAGCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20045158 305 - 122678785 TTTTCCTAATGAATAACCAGCTATATC----CTATTTCCAACCTCTTATCACTGAAGGT------AAACAAGATAAGTATATAAGTATATTGAAAGAGAAGGTCCAGCAAATGTGGAAGAAGAACTTTTGGCCTGGAGCCAGTGAAAACATTCACACTGTCACCCAGAAATATGAGACACTGATCCCATTCTGTAATCCTAAAATGCTTGCAGGACCATTTCCACACACGGTGGTGCTGCATGGTCCTGCGGGCGTTGGGAAGACCACTCT-GGCCAAGAAGTGCATGCTGGACTGGACAGAGGACAGCCTTGCAC i canFam3.chr1 C 0 C 0 a score=281822.000000 s hg38.chr19_GL949747v2_alt 627609 92 + 729520 ACAAATTCAAATATGCGTTCTACCTCAGCTGCAGGGAGCTCAGCCGCCTGGGCCCGTGCAGTTTTGCAGAG---CTGGTCTTCAGGGACTGGCCT- s panTro4.chr19 59896273 92 + 63644993 ACAAATTCAAATATGCGTTCTACCTCAGCTGCAGGGAGCTCAGCCGCCTGGGCCCGTGCAGTTTTGCAGAG---CTGGTCTTCAGGGACTGGCCT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56825426 92 + 60714840 ACAAATTCAAATATGCGTTCTACCTCAGCTGCAGGGAGCTCGGCCGCCTGGGCCCGTGCAGTTTTGCAGAG---CTGATCTCCAAAGACTGGCCT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3649680 90 + 106955855 ACGG--TCAGATACGCGTTCTACCTCAGCTGCAAGGAGCTCAGCCGCATGGGCCCCTGCAGTTTTGCAGAG---CTGATCTCCAAAGACTGGCCT- i nomLeu3.chr10 I 31972 I 1248 s rheMac3.chr19 60635412 92 + 64156825 AGAAATTCAAATACGCTTTCTACCTCAGCTGCAGGGAGCTCAGCCGCCTGGGCCCGTGCAGTTTTGCACAG---ATGGTCTTCAGGGACTGGCCT- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55776438 92 + 59248254 AGAAATTCAAATACGCTTTCTACCTCAGCTGCAGGGAGCTCAGCCGCCTGGGCCCGTGCAGTTTTGCACAG---ATGGTCTTCAGGGACTGGCCT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47880835 92 + 51301725 AGAAATTCAAATATGCATTCTACCTCAGCTGCAGGGAGCTCAGCCGCCTGGGCCCGTGCAGTTTTGCAGAG---ATGGTCTTCAGGGACTGGCCT- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47588065 92 + 50890351 AGAAATTCAAATACGCTTTCTACCTCAGCTGCAGGGAGCTCAGCCGCCTGGGCCCGTGCAGTTTTGCAGAG---ATGGTCTTCAGGGACTGGCCG- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45942687 92 + 49145316 ACAAATTCAAATACGCTTTCTACCTCAGCTGCAAAAGGCTCAGCCGCCTGGGCCTGTGCAGTTTTGCAGAG---CTGGTCTTCAGGGACTGGCCG- i calJac3.chr22 C 0 C 0 s canFam3.chr1 20045463 92 - 122678785 AGACCTGCCCCACTGCCTTCTATCTCAGCTGCAAGGCGCTCAGCCGCAAGGGGATGTGCTCCTTCATAGAACTCCTGGCCC----AGAGTGCCCCA i canFam3.chr1 C 0 C 0 a score=4250211.000000 s hg38.chr19_GL949747v2_alt 627701 1266 + 729520 GAATTGCAGGATGACATTCCACACATCCTAGCCCAAGCACGGAAAATCTTGTTCGTGATTGACGGCTTTGATGAGCTGGGAGCCGCACCTGG------GGCGCTGATCGAGGACATCTGCGGGGACTGGGAGAAGAAGAAGCCGGTGCCCGTCCTCCTGGGGAGTTTGCTGAACAGGGTGATGTTACCCAAGGCCGCCCTGCTGGTCACCACGCGGCCCAGGGCCCTGAGGGACCTCCGGATCCTGGCGGAGGAGCCGATCTACATAAGGGTGGAGGGCTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGACGAGGACCAAGCCATGCGTGCCTTTGAGCTAATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCCCCCGCGGTGTGCTGGATCGTGTGCACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACCCGGTCCCCACCTGCCTCACCCGCACGGGGCTGTTCCTGCGTTTCCTCTGCAGCCGGTT------CCCGCAGGGCG------------CACAGCTGCGGGGCGCGCTGCGGACGCTGAGCCTCCTGGCCGCGCAGGGCCTGTGGGCGCAGACGTCCGTGCTTCACCGAGAGGATCTGGAAAGGCTCGGGGTGCAGGAGTCCGACCTCCGTCTGTTCCTGGACGGAGACATCCTCCGCCAGGACAGAGTCTCCAAAGGCTGCTACTCCTTCATCCACCTCAGCTTCCAGCAGTTTCTCACTGCCCTGTTCTACACCCTGGAGAAGGAGGAGGAAGAGGA--------TAGGGACGGCCACACCTGGGACATTGGGGACGTACAGAAGCTGCTTTCCGGAGTAGAAAGACTCAGGAACCCCGACCTGATCCAAGCAGGCTACTACTCCTTTGGCCTCGCTAACGAGAAGAGAGCCAAGGAGTTGGAGGCCACTTTTGGCTGCCGGATGTCACCGGACATCAAACAGGAATTGCTGCGATGCGACATAAG---TTGTAAGGGTG---GACA---TTCAACGGTGACAGACCTGCAGGAGCTCCTCGGCTGTCTGTACGAGTCTCAGGAGGAGGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACGTTGTGCCATCTTCATTCTGCGTCAAGCACTGTCGAAACCTGCAGAAAATGTCACTGCAGGTAAT---AAAGGAGAATCTCCCGGAGAATGTCACTGCGTCTGAATCAGACGCCGAGGTTGAGAGGTGAGAACCGT-----TTCACTCTACCAG-----TCGTTCCATCTTT s panTro4.chr19 59896365 1266 + 63644993 GAATTGCAGGATGACATTCCACACATCCTAGCCCAAGCACGGAAAATCTTGTTCGTGATTGACGGCTTTGATGAGCTGGGAGCCGCACCTGG------GGCGCTGATCGAGGACATTTGCGGGGACTGGGAGAAGAAGAAGCCGGTGCCCGTCCTCCTGGGGAGTTTGCTGAACAGGGTGATGTTACCCAAGGCCGCCCTGCTGGTCACCACGCGGCCCAGGGCCCTGAGGGACCTCCGGATCCTGGCGGAGGAGCCGATCTACGTAAGGGTGGAGGGCTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGACGAGGACCGAGCCATGCGTGCCTTTGAGCTAATGAGGAGCAACGCGGACCTGTTCCAGCGGGGCTCGGCCCCCGCGGTGTGCTGGATCGTGTGCACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACCCGGTGCCCACCTGCCTCACCCGCACGGGGCTGTTCCTGCGCTTCCTCTGCAGCCGGTT------CCCGCAGGGCG------------CACAGCTGCGGGGCGCGCTGCGGACGCTGAGCCTCCTGGCCGCGCAGGGCCTGTGGGCGCAGACGTCCGTGCTCCACCGAGAGGATCTGGAAAGGCTCGGGGTGCAGGAGTCCGACCTCCGTCTGTTCCTGGACGGAGACATCCTCCGCCAGGACAGAGTCTCCAAAGGCTGCTACTCCTTCATCCACCTCAGCTTCCAGCAGTTTCTCACTGCCCTGTTCTACGCCCTGGAGAAGGAGGAGGAGGAGGA--------CAGGGACGGCCACACCTCGGACATTGGGGACGTACAGAAGCTGCTTTCCGGAGTAGAAAGACTCAGGAACCCCGACCTGATCCAAGCAGGCTACTACTACTTCGGCCTCGCTAACGAGAAGAGAGCCAAGGAGTTGGAGGCCACTTTTGGCTGCCGGATGTCACCGGACATCAAACAGGAATTGCTGCGATGCGACATAAG---CTGTAAGGGTG---GACA---TTCAACGGTGACAGACCTGCAGGAGCTCCTCGGCTGTCTGTACGAGTCTCAGGAGGAGGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAGGAAATATCCCTGCACTT---AAATGCAGTAGACGTTGTGCCATCTTCATTCTGCGTCAAGCACTGTCGAAACCTGCAGAAAATGTCACTGCAGGTAAT---AAAGGAGAATCTCCCGGAGAATGTCACTGCGTCTGAATCAGACGCCGAGGTTGAGAGGTGAGAACCGT-----TTCACTCTACCAG-----TCGTTCCATCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56825518 1266 + 60714840 GAATTGCAGGATGACATTCCACACATCCTAGCTCAAGCACAGAAAATCTTGTTCGTGATTGACGGCTTTGATGAGCTGGGAGCTGCACCTGG------GGCGCTGATCCAGGACATGTGCAGGGACTGGGAGAAGAAGAAGCCGGTGCCTGTCCTCCTGGGGAGTTTGCTGAACAGGTATATGTTACCCAAGGCCGCCCTGCTGGTCACCACGCGGCCCAGGGCACTGAGGGACCTCCGGTTCCTGGTGGAGGAGCCAATCTACATAAGGGTGGAGGGCTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGACGAGGACCAAGCCACGCGTGCCTTTGAGCTGATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGGTCGGCCCCCGCGGTGTGCTGGATCGTGTGCACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACACGGCCCCCACCTGCCTCACCCGCACGGGGCTGTTCCTGCGCTTCCTCTGCAGCCGGTT------CCCGCAGGGCG------------CACAGCTGCGGGGCGCGCTGTGGATGCTGAGCTTTCTGGCCGCGCAGGGCCTGTGGGCGCAGATGTCTGTGCTCCACCGAGAGGACCTGGAAAGGCTCAGGGTGCAGGAGTCCGACCTCCGTCTGTTCCTGGACGGAGACATCCTCCGCCAGGACACAGTCTCCAAAGGCTGCTACTCCTTCATTCACCTCAGCTTCCAGCAGTTTCTCACTGCGCTGTTCTACGCCCTGGAGAAGGAGGAGGAGGAGGA--------CAGGGACGGCCACGCCTGGGACATTGGGGACATACAGAAGCTGCTTTCCGGAGAAGAAAGACTCAGGAACCCCGACCTGATCCAAGCAGGATACTACTCCTTTGGCCTCGCTAACGAGAAGAGAGCTAAGGAGCTGGAGGCCACTTTTGGCTGCCGGATATCACCGGACATCAAACAGGAATTGCTGCAATGCGACATAAG---TTGTAAGGGTG---GACA---TTCAACGGTGACAGACCTGAAGGAGCTCCTTGGCTGTCTGTACGAGTCTCAGGAGGAAGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACGTTGTGCCATCTTCATTTTGCCTCAAGCACTGTCAAAACCTGCAGAAAATGTCACTGCAGGTAAT---ACAGGCAAATCTCCCGGAGAATGTCACTGCGTCTGAATCAGACGCTGAGGTTGAGAGGTAAGAACCGT-----TTCACTCTACCAG-----TCGTTCCATCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103338339 1266 - 106955855 GAATTGCAGGATGACATTCCACACATCCTAGCCCAAGCACAGAAAATCTTGTTCGTGATTGACGGCTTTGATGAGCTGGGAGCCCCACCTGG------GGCGCTGATCCAGGACATCTGCGGGGATTGGGAGAAGAAGAAGCCGGTGCCGGTCCTCCTGGGGAGTTTGCTGAAGAGGAGTATGTTACCCAAGGCCGGCCTGCTGGTCACCACGCGGTCCCGGGCCCTGAGGGATCTCCGGCTCCTGGCAGAGGAGCCGATCTACATAAGGGTGGAGGGCTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGACGAGGACCAAGCCATGCGTGCCTTTGAGCTGATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCCCCGGCGGTGTGCTGGATCGTGTGCACGACTCTGAAGCTGCAGATGGAGAAGGGCGAGGACCTGGCCCCCACCTGCCTCACCCGCACGGAGCTGTTCCTGCGCTTCCTCTGCAGCCGGTT------CCCGCAGGGCG------------CACAGCTGCGGGGCGCGCTGCGGAAGCTGAGCCTCCTGGCCGCGCAGGGGCTGTGGGCGCAGATGTCTGTGCTCCACCGAGAGGACCTGGAAAGGCTCGGGGTGCAGGAGTCCGACCTCCGCCCGTTCCTGGACGGACACATCCTCCGCCAGGACACAGTCTCGAAAGGCTGCTACTCCTTCATCCACCTCAGCTTCCAGCAGTTTCTCGCTGCGCTGTTCTATGCCCTggagaaggaggaggaggagga--------CAGGGACGGCCACGCCTGGGACATTGGGGACGTACAGAAGCTGCTTTCCGGAGGAGAAAGACTGAGGAACCCCGACCTGATTCAAGCAGGATACTACTCCTTCGGCCTCGCTAATGAGAGGAGAGCCAAGGAGCTGGAGGCCACTTTTGGCTGCCGGATTTCACCAGACATCAAACAGGAATTGCTGCGATGCGACGTAAG---TTGTAAGGGTG---GACA---TTCAACGATGACAGACCTGAAGGAGCTCCTCGGCTGTCTGTACGAGTCTCAGGAGGAGGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACGTTGTGCCATCTTCATTCTGTGTCAAGCACTGTCGAAACCTGCAGAAAATGTCACTGCAGGTCAT---AAAGGCGGAGCTCCCAGAGAATGTCACTGTGTCTGAATCAGACGCTGAGGCTGAGAGGTAAGAACCGT-----TTCAGTTTACCAG-----TGGTTCCATAttt i nomLeu3.chr10 M 100 I 819 s rheMac3.chr19 60635504 1261 + 64156825 GAACTGCAGGATGACATTCCACACATCCTAGCCCAAGCACATAAAATCTTGTTCGTGATTGACGGTTTCGATGAGCTGGGAGCCCCACCTGG------GGCGCTGATCCAGGACATCTGCGGGGACTGGGAGCAGCAGAAGCCGGTGCCGGTCCTCCTGGGGAGTTTGCTGAAGAGGAAGATGTTACCCAAGGCAACCCTGCTGGTCACCACGCGGCCCAGGGCCCTGAGGGACCTCCGGTTCCTGGCAGAGCAGCCCATCTACATAAGGGTGGAGGGGTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGACGAGGACCAAGCCATGCATGCCTTTGAGCTGATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCGCCCGCGGTGTGCTGGATCGTGTGTACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACCCGGCCCCCACCTGCCTCACCAGCACGGGGCTGTTCCTGCGCTTCCTCTGCAGCCAGTT------CCCGCAGGGCG------------CACAGCTCCGGGGCGCGCTGCGGGCGCTGAGCCTCCTGGCCGCGCAGAGTTTGTGGGCGCAGATGTCCGTGCTCCACGGAGAGGACCTGGAAAGCGCTGGGGTGCAGGAGTCCGACCTCCGCCTGTTCCTGGACAGAGACATCCTCCGCCAGGACGGAGTCGCCAAAGGCTGCTACTCCTTCATCCACCTCAGCTTCCAGCAGTTTCTCACTGCGCTGTTCTACGCCCTggaggaggaggaggaggagga--------CAGGGACGGCCATGCCTGGGACATTGGGGACGTGCAGAAGCTGCTTTCCGAAGAAGAAAGACTCAAGAACCCCGACCTGATCCAGGCAGGACGCTTCTTGGTCGGCCTGGCTAATGAGAAGAGAGTCAAGGAGTTGGAGGCCACCTTTGGCTGGCGGATGTCACCAGAGATCAAACAGGAATTGCTGCGATGCGACGTAAG---TCGTAAGAATG---GACA---TTTCACTGCGGCAGACCTGAGGGAGCTCCTCTGCTGTCTGTACGAGTCTCAGGAGGACGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACATTGCGCCGTCTTCATTCTGCTTCAAGCACTGTCAAAACTTGCAGAAAATGTCACTGCAGGTGATAAAAAAGGAGACGCTCCCGGAGAATGTCGCTGCGTCTGAATCCAACGCTGAGGCTGAGAGGTAGGAACC-T-----TTCACTCGACCGG-----TCGTTT------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55776530 1261 + 59248254 GAACTGCAGGATGACATTCCACACATCCTAGCCCAAGCACAGAAAATCTTGTTCGTGATTGACGGTTTCGATGAGCTGGGAGCCCCACCTGG------GGCGCTGATCCAGGACATCTGCGGGGACTGGGAGCAGCAGAAGCCGGTGCCGGTCCTCCTGGGGAGTTTGCTGAAGAGGAAGATGTTACCCAAGGCAACCCTGCTGGTCACCACGCGGCCCAGGGCCCTGAGGGACCTCCGGTTCCTGGCAGAGCAGCCCATCTACATAAGGGTGGAGGGGTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGATGACGACCAAGCCATGCGTGCCTTTGAGCTGATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCGCCCGCCGTGTGCTGGATCGTGTGTACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACCCGGCCCCCACCTGCCTCACCAGCACGGGGCTGTTCCTGCGCTTCCTCTGCAGCCAGTT------CCCGCAGGGCG------------CACAGCTCCGGGGCGCGCTGCGGGCGCTGAGCCTCCTGGCCGCGCAGGGTTTGTGGGCGCAGATGTCCGTGCTCCACGGAGAGGACCTGGAAAGCGCTGGGGTGCAGGAGTCCGACCTCCGCCTGTTCCTGGACAGAAACATCCTCCGCCAGGACGGAGTCGCCAAAGGCTGCTACTCCTTCATCCACCTCAGCTTCCAGCAGTTTCTCACTGCGCTGTTCTACGCCCTggagaaggaggaggaggagga--------CAGGGACGGCCATGCCTGGGACATTGGGGACGTGCAGAAGCTGCTTTCCAGAGAAGAAAGACTCAAGAACCCCGACCTGATCCAGGCAGGACGCTTCTTGTTCGGCCTGGCTAATGAGAAGAGAGTCAAGGAGTTGGAGGCCACCTTTGGCTGGCGGATGTCACCAGAGATCAAACAGGAATTGCTGCGATGCGACGTAAG---TCGTAAGAATG---GACA---TTTCACGGCGGCAGACCTGAGGGAGCTCCTCTGCTGTCTGTACGAGTCTCAGGAGGACGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACATTGCGCCGTCTTCATTCTGCTTCAAGCACTGTCAAAACTTGCAGAAAATGTCACTGCAGGTGATAAAAAAGGAGACGCTCCCGGAGAATGTCGCTGCGTCTGAATCCAACGCTGAGGCTGAGAGGTAGGAACC-T-----TTCACTCGACCGG-----TCGTTT------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47880927 1258 + 51301725 GAACTGCAGGATGACATTCCACACATCCTAGCCCAAGCACAGAAAATCTTGTTTGTGATTGACGGTTTTGATGAGCTGGGAGCCCCACCTGG------GGCGCTGATCCAGGACATCTGCGGGGACTGGGAGCAGCAGAAGCCAGTGCCGGTCCTCCTGGGGAGTTTGCTGAAGAGGAAGATGTTACCCAAGGCAACCCTGCTGGTCACCACGCGGCCCAGGGCCCTGAGGGACCTCCGGTTCGTGGCAGAGCAGCCGATCTACATAAGGGTGGAGGGGTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGACGAGGACCAAGCCATGCGTGCCTTTGAGTTGATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCGCCCGCGGTGTGCTGGATCGTGTGCACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACCCGGCCCCCACCTGCCTCACCAGCACGGGGCTGTTCCTGCGCTTCCTCTGCAGCCAGTT------CCCGCAGGGCG------------CACAGCTCTGGGGCGCGCTGCGGGCGCTGAGCCTCCTGGCCGCGCAGGGTTTGTGGGCGCAGATGTCCGTGCTCCACGGAGAGGACCTGGAAAGCGCTGGGGTGCAGGAGTCCGACCTCCGCCTGTTCCTGGACAGAGACATCCTCCGCCAGGACAGAGTCTCCAAAGGCTGCTACTCCttcatccacctcagcttccagcaGTTTCTCACTGCGCTGTTCTACGccctggaga---aggaggaggagga--------cagggacGGCCATGCCTGGGACATTGGGAACGTGCAGAAGCTGCTTTCCAGAGAAGAAAGACTCAAGAACCCCGACCTGATCCAGGCAGGACGCTTCTTGTTCGGCCTGGCTAATGAGAAGAGAGTCAAGGAGTTGGAGGCCACCTTTGGCTGCCGGATGTCACCAGAGATCAAACAGGAATTGCTGCGATGCGACATAAG---TCGTAAGAATG---GACA---TTCCACGGTGGCGGACCTGAAGGAGCTCCTCTGCTGTCTGTACGAGTCTCAGGAGGACGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACATTGCGCCGTCATCATTCTGCTTCAAGCACTGTCCAAACTTGGAGAAAATGTCACTGCAGGTGATAAGAAAGGAGACGCTCCCGGAGAATGTCGCTGCGTCTGAATCCAATGCTGAGGCTGAGAGGTAGGAACC-T-----TTCACTCGACTGG-----TCGTTT------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47588157 1261 + 50890351 GAACTGCAGGATGACATTCCACACATCCTAGCCCAAGCACAGAAAATCCTGTTCGTGATTGACGGTTTCGATGAGCTGGGAGCCCCACCTGG------GGCGCTGATCCAGGACATCTGCGGGGACTGGGAGCAGCAGAAGCCGGTGCCGGTCCTCCTGGGGAGTTTGCTGAAGAGGAAGATGTTACCCAAGGCAAACCTGCTGGTCACCACGCGGCCCAGGGCCCTGAGGGACCTCCGGTTCCTGGCAGAGCAGCCAATCTACATAAGGGTGGAGGGGTTCCTGGAGTCGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGAGGAGGACCAAGCCATGCGTGCCTTTGAGTTGATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCGCCCGCGGTGTGCTGGATCGTGTGCACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACCCGGCCCCCACCTGCCTCACCAGCACGGAGCTGTTCCTGCGTTTCCTCTGCAGCCAGTT------CCCGCAGGGCG------------CACAGCTCTGGGGTGCGCTGCGGGCGCTGAGCCTCCTGGCCGCACAGAGTTTGTGGGCGCAGATGTCCGTGCTCCATGGAGAGGACCTGGAAAGCGCTGGGGTGCAGGAGTCCGACCTCCGCCTGTTCCTGGACAGAGACATCCTCCGCCAGGACAGAGTCTCCAAAGGCTGCTACTCCTTCATCCACCTCAGCTTCCAGCAGTTTCTCACTGCGCTGTTCTACGCCCTggagaaggaggaggaggagga--------CAGGGACGGCCATGCCTGGGACATTGGGGACGTGCAGAAGCTGCTTTCCAGAGAAGAAAGACTCAAGAACCCCGACCTGATCCAGGCAGGACGCTTCTTATTCGGCCTGGCTAATGAGAAGAGAGTCAAGGAGTTGGAGGCCACCTTTGGCTGCCGGATGTCACCAGAGATCAAACAGGAATTGCTACAATGCGACATAAG---CCGTAAGAATG---GACA---TTCCACGGTGGCAGACCTGAAGGAGCTCCTCTGCTGTCTGTACGAGTCTCAGGAGGACGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACATTGCGCCATCTTCATTCTGCTTCAAGCACTGTCCAAACTTGCAGAAAATGTCACTGCAGGTGATAAAAAAGGAGACGCTCCCGGAGAATGTCGCTGCATCTGAATCCAACACTGAGGCTGAGAGGTAGGAACC-T-----TTCACTCGACTGG-----TCGTTT------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45942779 1266 + 49145316 GAATTGCAGGGTGACGTTCCAGACATCCTCGCCCAAGCACAGAAAATCCTGTTCGTGGTCGACGGCCTCGATGAGCTGGGAGCCCCACCCGG------GGCGCTGATCCACGACATCTGCGGGGACTGGCTGAAGCCGAAGCCGGTGCCGGTCCTCCTGGGGAGTTTGCTGAAGAGGAAGATGTTACCCAAGGCCGCCCTGCTGGTCACCACGCGGTCCTGGGCCCTGAGGGACCTCCGGCCCCTGATGGAGCAGCCCATCTACATAAGGGTGGAGGGGTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGACACACTTTGGAGAGGAGGACCAAGCCACGCGTGCCTTTGAGCTGATGAGAAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCGCCCGCGGTGTGCTGGATGGTGTGCACGAGTCTGAAGCTGCAGATGGAGAATGGGGAGGACCCGGCCACCACCTGCCACACCCGCACGGGGCTGTTCCTGCACTTTCTCTGCAGCCGCTT------CCCGAAGGGTG------------CACAGCTCGGGGGCACGCTGCGGGCGCTGAGCATCCTGGCTGCGCAGGGCCTGTGGGCGCAGATGTCCGTGTTCCACAGAGAGGACCTGGAGAGCTTCAGGGTGCAGGAGTCCGACCTCCGCCCGTTCCTGGACAGAGGCATCCTCCGCCAGGATAGAGACTCTAAAGACTGCTACTCCTTCCTCCACCTCAGCTTCCAGCAGTTTTTCACTGCGCTGTTCTACGCCCTGGAGA---AGGAGGAGGAGGA--------CAGGGACGGCCACGCCTGGGACATTGGGGATGTGCAGAGGCTGCTCTCTGGAGAAGAAAGAGTCCAGAACCCCGACCTGATCCAAGCGGGACACTTCTTATTCGGCCTTGCCAACGAGAAGAGAGCCGCGGAGTTGGAGACCACTTTCGGCTGCGTGATGTCACGGGAGATCAAACAGGAACTGCTGCGGTGCGACATCAT---TTGTGAGGAGGACAGATA---CTCAACCTTGACGGACCTGAAGGAGGTCTTACACTGTCTGTACGAGTCTCAGGAGGGGGAGCTGGTGAAGGCGGTGATGGCCCCGTTGAAAGAAATATCCGTGCACTT---AAGCGCTGCAGACATTGTGCCCTCTTCCTTCTGCCTCAAGCATTGTCGGAACTTGGAGAAAATGTCACTGCAGGTGAT---AAAGGCAAAGCTCCCGGAGAATGTCACTGCCTCTGAATCAGATGCTGAGGCTGAGAGGTAAGAACCGT-----TTCTCTCCACTGG-----TCCTTCCGTCTTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20045555 1308 - 122678785 GACCTGCAGGATGCCCTTGCACAGGTCCTGACCCAGGCACAGAAACTCCTGTTTGTCATTGATGCTTTCGAGGAGCTGCGCGTGCCCTCAGGGGTGGAGGCGCTGGTGCACGACCTGTGTGTGGACTGGAAGACACAGAGGCCTGCGTCCACCCTCCTGGGGAGCTTACTGAAGAGAAAGCTCTTACCCACGGCCGCCCTACTGGTCACCACACGGCCCGAGGCCCTAAGGGAGCTGCGGCTCATGGTGGAGCAGCCACTCTTCGTGGAGATCGAGGGGCTCTCAGAGTGTGACAGGAAGGCGTATTTCCTGAGACACTTTGGAGAGGAGGCTCAGGCGCTGCGTGCTTTCCACCTGATGAAGAGCAATGCAACGCTGTTCCAAATGGGCGCGGCACCCGCTGTGTGCTGGATGGTGTGCACCTGCCTGAAGCTGCAGATGGACGAGGGTGAGGACCCTGGCCCCACCTGCCAGACCACCACATCGTTGTTGCTGCGTTTCCTCTGCAGCCAGTTTGCGCCCGCGCAGGGCAGCTGTCTGGGGCTGCACCTCAGGTCTACTCTGCACGCTCTGTGCCTGCTGGCCACTGAGGGCGTGTGGACACAGACCTCAGTGTTTGATGGACATGACCTGCTCAGGCTGGGTGTGCATGAGTCTGACCTGCACCCTTTCCTGAACAGGAATATCCTCCAGAAGAGCAGAGACTGTGAGGGCTGCTACTGCTTCCTCCACCTGAGTGTCCAGCAGTTCCTGGCCGCTGCCCTCTACATTCTGGGGAGCCAGGACCACCAAGACCTTCCAGCAGGAA--GCCCTAGCTGGGATGCTGGGAATGTGCAGAGGCTCCTCTCCAAGGAAGAAGGACTCAAGAACCCCTACCTAGCCCCCGTGGGGCACTTCCTATTTGGCCTCACCAATGAAAAGAGGGCCAGGGAGCTGGGGATGACTTTTGGCTGCCTGGTGTCCACCAAGGTCAAGCAGGAACTGCTGGAATGCAGGGTAGGGTCTCCTGAGAACA---GACCCTTCTCCTCGGTGACAGACACGAAGGAGACTTTGCACTGTCTCTATGAATCCCAGGAGGAGCAGCTTGTGAAGGAAGCCATGGTCCAGGTGACAGAAGTGTCCCTGGTTTTCAAAGATACCTCAGACATCATGCATGCATCCTTTTGCCTCAAGCATTGTGAAAGCTTGCAGAAAATGTGGCTGCAGATAGA---AAAGGGGATGTTTCTGGAGAATGATGCTGTGTCAGAATCAGAGGACCAGGCTGACCGGTAAGAATCCTCACTGTTCACTCTGTTAGCTTGCTTTTTC------- i canFam3.chr1 C 0 C 0 a score=5033.000000 s hg38.chr19_GL949747v2_alt 628967 2 + 729520 AG s panTro4.chr19 59897631 2 + 63644993 AG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56826784 2 + 60714840 AG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60636765 2 + 64156825 AA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55777791 2 + 59248254 AA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882185 2 + 51301725 AG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47589418 2 + 50890351 AG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45944045 2 + 49145316 AG i calJac3.chr22 C 0 C 0 s canFam3.chr1 20046863 2 - 122678785 AG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103339605 819 - 106955855 I a score=141121.000000 s hg38.chr19_GL949747v2_alt 628969 49 + 729520 CCTCATCCCATGCCCCCTTAGGAAGAGGCCAGAG---CCTCCTATGCACTGT s panTro4.chr19 59897633 49 + 63644993 CCTCATCCCATGCCCCCTTAGGAAGAGGCCAGAG---CCTCCTATGCACTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56826786 49 + 60714840 CCTCATCCCATGCACCCTTAGGAAGAGGCCAGAG---CCTCCTATGCACTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3651018 49 + 106955855 TCCCATTCCACGCTCCACTAGGAAGAGGCCAGCG---TCTCCTGTGCCCTGT i nomLeu3.chr10 I 1248 I 3527 s rheMac3.chr19 60636767 49 + 64156825 CCTCATCCCATGCGCCCTTAGGAAGAGGCCAGAG---CCTCCTATGTGCTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55777793 49 + 59248254 CCTCATCCCATGCGCCCTTAGGAAGAGGCCAGAG---CCTCCTATGTGCTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882187 49 + 51301725 CCTCATCCCATGCGCCCTTAGGAAGAGGCCAGAG---CCTCCTATGTGCTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47589420 49 + 50890351 CCTCATCCCATGCGCCCTTGGGAAGAGGCCAGAG---CCTCCTATGTGCTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45944047 48 + 49145316 CCTCATCCCAGGGCCCCTTAGGAGGAGGCCAGAG---CTTCCTGGG-ACTGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 20046865 48 - 122678785 CCTCATCCCCTGCG---TTAGAAACAGGGCAGAGTGTCCCCCCGCTCCCTT- i canFam3.chr1 C 0 C 0 a score=117386.000000 s hg38.chr19_GL949747v2_alt 629018 54 + 729520 GGCTTAGGGTCAGGAATTCCCTCTTGTTGGAC---TCtttgtttgttttt-------gttttga s panTro4.chr19 59897682 54 + 63644993 GGCTTAGGGTCAGGAATTCCCTCTTGTTGGAC---TCtttgtttgttttt-------gttttga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56826835 62 + 60714840 GACTTAGGGTCAGGAATTCCCTCTTGTTGGAC--ttttttgtttgttttttgttttgtttttga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103340424 54 - 106955855 GGCTTAGGGTCAGGAATTCCCTCTTGTTGGAC--TCttttgtttgtttgt--------ttttgg i nomLeu3.chr10 I 819 C 0 s rheMac3.chr19 60636816 46 + 64156825 GGCTTAGGCTCAGGAATTCCCTCTTTTTGGAC---TCtttttttttta---------------a i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55777842 52 + 59248254 GGCTTAGGCTCAGGAATTCCCTCTTTTTGGAC---tcttttttttttgtt-------tttt--a i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882236 53 + 51301725 GGCTTAGGGTCAGGAATTCCCTCTttttggac---tcttttttttttttt-------tttt-ga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47589469 54 + 50890351 GGCTTAGGGTCAGGAATTCCCTCTTTTTGGAC---TCttttttttttttt-------tttttGA i chlSab2.chr6 C 0 I 1410 s calJac3.chr22 45944095 55 + 49145316 GGCTTAGAGTCGGAAATTCCCTCTTGCTGGGC--ttcctttcttgttgct-------gttttga i calJac3.chr22 C 0 C 0 s canFam3.chr1 20046913 57 - 122678785 GGCATAGGATCAGAATTTTCTTCTTGCCAGAATTTCTTCTGCTAGCTTGC-------TCTTCAA i canFam3.chr1 C 0 C 0 a score=10075.000000 s hg38.chr19_GL949747v2_alt 629072 7 + 729520 gat-ggag s panTro4.chr19 59897736 7 + 63644993 gat-ggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56826897 7 + 60714840 gat-ggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103340478 8 - 106955855 gataggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60636862 7 + 64156825 gac-ggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55777894 7 + 59248254 gac-ggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882289 5 + 51301725 gac---ag i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45944150 7 + 49145316 gat-ggat i calJac3.chr22 C 0 C 0 s canFam3.chr1 20046970 7 - 122678785 GGT-GGGG i canFam3.chr1 C 0 I 1762 e chlSab2.chr6 47589523 1410 + 50890351 I a score=190724.000000 s hg38.chr19_GL949747v2_alt 629079 83 + 729520 tcttgctctgtcgctcaggctggagc------gcagtggcgcgatcttggctccctgcaacctccgcctcccgggttcaagtgattctt s panTro4.chr19 59897743 83 + 63644993 tcttgctctgtcgcccaggctggagc------gcagtggcgcgatcttggctcactgcaacctctgcctcccgggttcaagtgattttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56826904 83 + 60714840 tcttgctctatcgcccaacctggagc------gcagtggcgtgatcttggctcactgcaacctctgcctcctgggttcaagcgattctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103340486 83 - 106955855 tcttgctctgtcacccaggctggagc------gcagtggcatgatcttggctcactgcaacctctgcctcccgggttcaagcgattctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60636869 83 + 64156825 tcttgctctgtcacccaggctggagc------gcagtggcacgatcttggctcactgcaacctctgcctcccgggttcaagcgattctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55777901 83 + 59248254 tcttgctctgtcacccaggctggagc------gcagtggcacgatcttggctcactgcaacctctgcctcccgggttcaagcgattctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882294 83 + 51301725 tctcgctctgtcacccaggctggagc------gcagtggcacgatcttggctcactgcaacttctgcctcccaggttcaagcgattctc i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45944157 89 + 49145316 tcttgctctgttgcccatgctggagctggagtgcagtggtgggatctcagctcactgcaacctccacctcccaagttcaagcaattctc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20046977 1762 - 122678785 I e chlSab2.chr6 47589523 1410 + 50890351 I a score=838699.000000 s hg38.chr19_GL949747v2_alt 629162 336 + 729520 ctgcctcagcctcctgagtagctgggactacaggcgcctgccaccttgcccggctaatttttatattttcattagagacgggatctcagcatgttggccagtctggtcttgaactccgcctgacctcaggtgatccacctgcctcagcc-tccaaag---tgggattacaggcatgattcaccatgcccggccCAAATATAt-ttttttaagacagggtcttgctgtgttgctcaggctgga--------gtacagtggtgaaatc--agctcactgcatcctcaaacttctgggttcaagtgat-------------gttcctgagtacctgggatgacaggtattaagtgtgcaccatcatg s panTro4.chr19 59897826 337 + 63644993 ctacctcagcctcctgagtagctgggactacaggcgcctgccaccttgcctggctaatttttatattttcattagagacgggatctcagcatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctgcctcagccttccaaag---tgggattacaggcatgattcaccatgcccggccCAAATATAt-tttttgaagacagggtcttgctgtgttgctcaggctgga--------gtacagtggtgaaatc--agctcactgcagcctcaaacttctgggttcaagtgat-------------gttcctgagtacctgggatgacagttattaaatgtgtaccatcatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56826987 339 + 60714840 ctgcctcagccttctgagtagctgggactacaggcgcccaccaccttgcttggctaatttttatattttcagtagagatgggatctcaccatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctgcctcagcctcccaaag---tgggattacaggcatgattcaccatgcccggccCAAATAttt-ttttttaagacagggtcttgctctgttgctcaggctgga--------gtacagtggcgcaatcatagctcactgcagcctcaaacttctgggttcaagtgtt-------------gttcctgagtacctgggatgacaggtattaggtgtgcaccatcatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103340569 347 - 106955855 ctgcctcagcctcctgagtagctgggactacaggcacccgctgtcttgcctggctaatttttatattttcagtagagacgggatctcaccatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctgcctcagcctcccaaag---tgggattacaggcatgattcaccatgcctggccCAAATATAt-ttttttaagacagggtcttgctctgttgctcaggctggagtacagtggtacagtggtgcaatcatagctcactgcagcctcaaacttcggggttcaagtgaa-------------gttcctgagtacctgggatgacaggtattaggtgtgaaccatcatg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60636952 331 + 64156825 ctgcctcagcctcctgagtagctggg---------acctgtcaccatgcccggctagtttttgtatttttagtagagacagagtctcaccatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctgcctcagcctcccaaag---tgggaatacaggcatgattcaccgcgcccggccCAAATATCTAttttttaaggcagggtcttgctctgttgctcaggctgga--------gtacaatggtgcaatcatagctgactgcagcttcaaacttctgggctcaagtgaa-------------gctcctgggtacctaggatgacaagtattaggtgtgcaccatcgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55777984 331 + 59248254 ctgcctcagcctcctgagtagctggg---------acctgtcaccatgcccggctagtttttgtatttttagtagagacagagtctcaccatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctgcctcagcctcccaaag---tgggaatacaggcatgattcaccgtgcccggccCAAATATCTAttttttaaggcagggtcttgctctcttgctcaggctgga--------gtacaatggtgcaatcatagctgactgcagcttcaaacttctgggctcaagtgaa-------------gctcctgagtgcctaggatgacaagtattaggtgtgcaccatcgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882377 340 + 51301725 ctgcctcagcctcctgagtagctgggactacaggtacctgtcaccatgcccggctagattttgtatttttagtagagacagagtctcgccatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctacctcagcctcccaaag---tgggaatacaggcatgattcaccgtgcccagcccaaatatctattttttaaggcagggtcttgctctgttgctcaggctgga--------gtacaatggtgcaatcatagctgactgcagcttcaaacttctgggctcaagtgat-------------gctcctgagtacctgggatgacaggtattAGGTGTGCACCATCGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47590933 340 + 50890351 ctgcctcagcctcctgagtcactgggactataggtacctgtcaccatgcccggctagtttttgtatttttggtagagacagagtctcgccatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctgcctcagcctcccagag---tgggaatacaggcatgattcaccgtgcccggccCAAATATCTAttttttaaggcagggtcttgctctgttgctcaggctgga--------gtacaatggtgcaatcatagctgactgcagcttcaaacttctgggctcaagtgat-------------gctcctgagtacctgggatgacaggtattaggtgtgcaccatcgtg i chlSab2.chr6 I 1410 C 0 s calJac3.chr22 45944246 299 + 49145316 ctacctcagcctcctgagtagctagaattgcaggcatgcaccaccatgcctggctaatttttgtatttctagaagagatggggtctcaccatgttgcccaagcccctctcgaactctg---gacctcaaataatccacctgctttggcctctcaaagtgctgtgactatagatccaagccatcactcccggcc----TTTTT-TTTTTT---------TTTTTTTAAGTTG--AAGGCTGGA---------------------------------------cttaaactcttgggctcaagcaatccttctgccttaggctccaaagtagctgggacta-------gaggtgtgcactgccatg i calJac3.chr22 C 0 I 892 e canFam3.chr1 20046977 1762 - 122678785 I a score=122096.000000 s hg38.chr19_GL949747v2_alt 629498 91 + 729520 tccagctaacttaagtgggggtttttttttgtgtttttttttttttttttttttttggaaagacaaaatctcactatgttgtccaggctgg s panTro4.chr19 59898163 74 + 63644993 cccagctaacttaagtggggg-----------------ttttttttgcttttttttggaaagacaaaatctcactatgttgtccaggctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56827326 82 + 60714840 cccag------taagtggg---ttttttgtttttttgtgtttttttttttttttttggaaagacagaatctcactatgttgcccaggctgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103340916 78 - 106955855 cccagctaacttacgtggg---tttttt----------ttttttttttttttttccggaaagacagaatctcactatgttgcccaggctgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60637283 61 + 64156825 ctcagctaacttaagtga--------------------ctttttttttt--------gaaag--agaatctcactatgttgcccaggctgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55778315 67 + 59248254 ctcagctaacttaagtga--------------------ctttttttttt--tttttggaaag--agaatctcactatgttgcccaggctgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882717 69 + 51301725 CTCAGCTAActtaagtga--------------------ctttttttttttttttttttaaag--agaatctcactatgttgcccaggctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47591273 63 + 50890351 ctcagctaacttaagtga--------------------ctttttttttt------tttaaag--agaatctcaccatgttgcccaggctgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45945437 63 + 49145316 cccagcctttttt-------------------------tttttttttttttttttttgagac--agagtcttgctctgttg-ccaggctgg i calJac3.chr22 I 892 I 80 e canFam3.chr1 20046977 1762 - 122678785 I a score=23278.000000 s hg38.chr19_GL949747v2_alt 629589 18 + 729520 tcttgaactcccaaagca s panTro4.chr19 59898237 18 + 63644993 tcttgaactcccaaagca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56827408 18 + 60714840 tcttgaactcccaaagca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103340994 18 - 106955855 tcttgaaatcccaaagca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60637344 7 + 64156825 tcttga-----------a i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55778382 7 + 59248254 tcttga-----------a i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882786 18 + 51301725 tcttgaactctcaaagca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47591336 18 + 50890351 tcttgaactcTCAAAGCA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20046977 1762 - 122678785 I e calJac3.chr22 45945500 80 + 49145316 I a score=985349.000000 s hg38.chr19_GL949747v2_alt 629607 409 + 729520 ctgagattacaggcatgagttaccacacgccctgcctgaatatttcttattgatatgtatagatatgtatatTCCCAATC-------------tttttttttttttttgagacggagtttcactctttttcccaggtcggagtgaagtggctcgatctcggctcactgcaacctccgccccaccaggttcaatgattctcctgcctcagcctcatgagtagctgggattacagccacccacgaccatgcccagctaatttttgtacttttagtagagacggggtttcaccatgttggccaggcaggtctcgaactcccgacctcaggtgatccacccgcctcagcctcacaaagtgctaggattataggcgtgagtcaccgtgcccggtcTATATTCTCTATCTTTTATCAATGATGTGCTT s panTro4.chr19 59898255 422 + 63644993 ctgagattacaggcatgagttaccacacgccctgccTGAATATTTCTTATTGATATGTATAGATATGTATATTCCCAATCttttttttttttttttttttttttttttgagacggagtttcactctttttcccaggttggagtgaagtggcttgatctcggctcactgcaacctctgccccaccaggttcaatgattctcctgcctcagcctcatgagtagctgggattacagccacccacgaccatgcccagctaatttttgtacttttagtagagacggggtttcaccatgttggccaggcaggtctcgaactcccgacctcaggtgatccacctgcctcagcctctcaaagtgctaggattataggcgtgagtcaccgtgcccagtcTATATTCTCTATCTTTTATCAATGATGTGCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56827426 399 + 60714840 ctgggattacaggcatgagctaccacacgccctgccTGAATATTTCTTACTGGTATGTATAGATATGTATATTCCCAA---------------tttttttttttttttgagacggagtttcactctttttctcaggttggagtgaagtggctcgatctcagctcactgcaacctccgccccaccaggttccatgattctcctgcctcagcctcatgagtagctgggattacagccacccacgaccatgcccagctaatttttgtacttttagtagagatggggtttcaccatgttggccaggcagatctcaaactcctgacctgaggtgatccacctgcctcagcctcacaaagtgctaggattataggcgtgagccaccgtgcccagtcT--------TCTCTTTTATCAATGATGTGCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341012 422 - 106955855 ctgggattacaggcatgagctaccacacACCCTGCCTGAATATTTCTTATTGATATGTATAGATATGTATATTCCCAATCttttttttttttttttttttttttttttgagacagcgtttcactctttttcccaggttggagtgaagtggctcgatctcggctcactgcaacctccgccccaccaggttcaatgattctcctgtctcagcctcataagtagctgggattacagccacccatgaccatgcccagctaatttttgtacttttagtagagacggggtttcaccatgttggccaggcaggtctcgaactcctgacctcaggtgatccacccgcctcagcctcacaaagtgctaggattacaggtgtgagccaccgtgcccggtcTGTATTCTCTATCTTTTATCAATGATGTGCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60637351 389 + 64156825 ctGGGATCACAGACATGAGGTACCATACACCCTGCCTAAATATTTTTTATTGACATGTATA---------------------------tttttttttttttttttttggtgacagcgtttcactcttttgcccaggttggagtgaagtggcccaatctcagctcactgcaacctccaccccaccaggttcattgattctcctgcctcagcctcacgagtagctgggattacctccacccacaaccacgcccggctaatttttgtacttttagtagagacaaggtttcaccatgttggccaggctggtttcgaactcctgacctcaggtgatcccaccgcctcagccttacaaagcagtaggattagaggcatgagccaccgtacccggccTGTAT------TCTTTTATCAGTGATGTGCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55778389 404 + 59248254 ctGGGATCACAGACATGAGGTACCATACACCCTGCCTAAATATTTTTTATTGACATGTATA----------TTCACGAtt--tttttttttttttttttttttttttGGTgacagcgtttcactcttttgcccaggttggagtgaagtggcccaatctcagctcactgcaacctccaccccaccaggttcactgattctcctgcctcagcctcacgagtagctgggattacctccacccacaaccacgcccggctaatttttgtacttttagtagagacaaggtttcaccatgttggccaggctggtttcgaactcctgacctcaggtgatcccaccgcctcagccttacaaagcactaggattacaggcatgagccaccgtgcccggccTGTAT------TCTTTTATCAATGATGTGCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882804 397 + 51301725 ctgggatcacagacatgaggtACCATACACCCtgcctaaatattttttattgacatGTATA----------TTCacgat---------tttttgttgttgttgttgttgagacaacgtttcactcttttgcccaggttggagtgaagtggctcgatctcagctcactgcaacctccaccccaccaggttcaatgattctcctgcctcagcctcacgagtagctgggattacctccacccacaaccacgcccagctaatttttgtacttttagcagagacaaggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatcccaccacctcagcctcacaaagcactaggattacaggcatgagccaccgtgcccggcctgtat------tcTTTTATCAATGTTGTGCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47591354 391 + 50890351 CTGGGATCACAGACATGAGGTACCATACACCCTGCCTAAATATTTCTTATTGACATGTATA----------GTCACAGT---------Ctttttcttttttttt----gagacagcgtttcactc--ttgcccaggttggagtgaagtggctcgatctcagctcactacaacctccaccccaccaggttcaatgattctcctgcctcagcctcacaagtagctgggattacctccacccacaaccacgcccagctaatttttgtacttttagtagagacaaggtttcaccgtgctggccaggctggtctcgaactcctgacctcaggcgatcccgccgcctcagcctcacaaagcactaggattacaggcgtgagccaccgtgcctggccTGTGT------TCTTTTATCAATGATGTGCGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45945580 315 + 49145316 ctgggactacaggcgcacgccaccaa-------gcccagcTAAT--------------------------------------------ttttttttctttttctttttgagacagagtttcacttttttgcctaggttggagtgaaatggcacaatctcagctcactgca--------------------------------------------------------attgcaggcacccgccaccatgcccagctaattttcatatttttagtagagactgggttttgccatgttggtcaggctggtctccaactcttgacctcaggtgatttacctgcctcagcctcccaaagcgctaggattacaggtgtgagccaccatgcccACACTGTATTCCCAATCTTTTATCTATGATATGTTT i calJac3.chr22 I 80 C 0 e canFam3.chr1 20046977 1762 - 122678785 I a score=156376.000000 s hg38.chr19_GL949747v2_alt 630016 53 + 729520 AGCATTTTAACTTATTTTTACCCTCTATTGGA-TTTTTGTCTAAGAAGAATAGG s panTro4.chr19 59898677 53 + 63644993 AGCATTTTAACTTATTTTTACCCTCTATTGGA-TTTTTGTCTAAGAAGAATAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56827825 53 + 60714840 AGCATTTTAACTTATTTTTACCCTCTATTGGA-TTTTTGTCTAAGAAGAACAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341434 53 - 106955855 AGCATTTTAACTTATTTTTACCCTCTACTGGA-TTTTTGTGTAAGAAGAATAGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60637740 50 + 64156825 AGCATTTTAACTTATTTTTACCCTCTGTTGGA-TTTTTGTGT---AAGAGTAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55778793 50 + 59248254 AGCATTTTAACTTATTTTTACCCTCTGTTGGA-TTTTTGTGT---AAGAGTAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47883201 51 + 51301725 agcattttaacttatttttaccCTCTGTTGGATTTTTTGTGT---AAGAGTAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47591745 50 + 50890351 AGCATTTTAACTCATTTTTAGACTCTGTGGGA-TTTTTTTGT---AAGAATAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45945895 53 + 49145316 AGCATTTTAACTTATTTTTACCCTCTATTGGA-TTTTTGTGTAAGAAGTATAAG i calJac3.chr22 C 0 I 481 s canFam3.chr1 20048739 53 - 122678785 agaaTTTTGGCTTATTCTGACCCTCTGTAAGA-TTCTTGTGCAAGAAATTTGAG i canFam3.chr1 I 1762 C 0 a score=1268441.000000 s hg38.chr19_GL949747v2_alt 630069 397 + 729520 TTCTTTCTCCTGTGATGCTTCTTGGGTGTTGAGTTGTCTGATGGTGGTGCTAATAAGTGATTACATGGTCCAGCTTTCAATTG----------TACTCATTTGTCAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCCGTGATGGACACACA----------------------TTTGGTGTAA-CCC--TTTCTTCTCTTCCCTATAGATCCCAGGATGATCAGCACATGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGATCAAATAAGGATCTGATGGGTCTAGCAATCAATGATAGCTTTCTCAGTGCCTCCCTAGTAAGGATCCTGTGTGAACAAATAGCCTCTGACACCTGTCATCTCCAGAGAGTGGTGTAAGTAGAAACTAATTCATGAACTCAAATCCTTAGGGTATGAAAAT s panTro4.chr19 59898730 398 + 63644993 TTCTTTCTCCTGTGATGCTTCTTGGGTGTTGAGTTGTCTGATGGTGGTGCTAATAAGTGATTACATGGTCCAGCTTTCAATTA----------TACTCATTTGTCAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCCGTGATGGACACACA----------------------TTTGGTGTAACCCC--CTTCTTCTCTTCCCTATAGATCCCAGGATGATCAGCACATGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGATCAAATAAAGATCTGATGGGTTTAGCAATCAACGATAGCTTTCTCAGTGCCTCCCTAGTAAGGATCCTGTGTGAACAAATAGCCTCTGACACCTGTCATCTCCAGAGAGTGGTGTAAGTAGAAACTAATTCGTGAACTAAAATCCTTAGGGTGTGAAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56827878 395 + 60714840 TTCTTTGTCCTGTGATGCTTTTTGGGTGTTGAGTTGTCTGATGGTGGTGC---TAAATGATTAAATGGTCCAGTTTTCAATTA----------TACTTATTTGTTAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCCGTGATGGACATACA----------------------TTTGGTGTAACCCG--CTTCTTCTCTTCCCTGTAGATCCCAGGATGATCAGCACGTGCTTCCTTTCTGGATGGACCTTTGTTCCATATTTGGCTCAAATAAGGATCTGATGGGTCTAGCAATCAATAATAGCTTTCTCAGTGCCTCCCTAGTAAGGATCCTGTGTGAAGGAATAGCCTCTGACACCTGTCATCTCCAGAGAGTGGTGTAAGTAGAAACTAATTCGTGAACTGAAATCCTTAGGGTGTGAAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341487 392 - 106955855 TTCTTTCTCCTGTGATGCTTCTTGGGTGTTGAGTTGTCTGATGGTGGTGC---TAAATGATTAAATGGTCCAGCTTTCAGTTA----------TACTTATTTGTTAGGGGTATATGCACAGAGAAACCCTAAATACTTCAGCCGTGATGGACACACA----------------------TTTGATGTAACCCC-----CTTCTCTTCCCTGTAGATCCCAGGATGATGAGCACGTGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGCTCAAATAAGGATCTTATGGGTCTAACAATCAATAATAGCTTTCTCAGTGCCTCCCTAGTAAGGATCCTGTGTGAACAAATAGCTTCTGACACCTGTCATCTCCAGAGAGTGGTGTAAGTAGAAACTAATTCATGAATTAAAATCCTTAGGGTGTGAAAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60637790 401 + 64156825 TTCTTTCTTCTGTGATGCTTCTTGGCTGTTGAGTTGTCTGATGGTGGTGC---CAAAAGATTAAATGGTCCAGCTTTCAGTTATACTTATTTCTACTTATTTGTTAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCCATGATGAACCTACA-----------------------TTGATGTAACCCC-----TTTCTCTTCCCTATAGATCCCAGGATGATCAGGACATGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGCTCAAATAAGGATCTGATGGGTCTAGAAATCAATAATAGCTTTCTGAGTGCCTCCCTAGTAAAGATCCTGTGTGAACAGATAGCCTCTGACAACTGTCATCTCCAGAGACTGGTGTAAGTAGACACTAATTCATGAACTAAAATCCTAAGGGTGTGAAAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55778843 401 + 59248254 TTCTTTCTTCTGTGATGCTTCTTGGCTGTTGAGTTGTCTGATGGTGGTGC---CAAAAGATTAAATGGTCCAGCTTTCAGTTATACTTATTTCTACTTATTTGTTAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCCATGATGAACCTACA-----------------------TTGATGTAACCCC-----TTTCTCTTCCCTGTAGACCCCAGGATGATCAGGACATGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGCTCAAATAAGGATCTGATGGGTCTAGAAATCAATAATAGCTTTCTGAGTGCCTCCCTAGTAAAGATCCTGTGTGAACAGATAGCCTCTGACAACTGTCATCTCCAGAGACTGGTGTAAGTAGACACTAATTCATGAACTAAAATCCTAAGGGTGTGAAAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47883252 401 + 51301725 TTCTTTCTTCTGTGATGCTTCTTGGGTGTTGAGTTGTCCGATGGTGGTGC---CAAAAGATTAAATGGTCCAGCTTTCAGTTACACTTATTTCTACTTATTTGTTAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCcatgatgaacctaca-----------------------ttgatgTAACCCC-----TTTCTCTTCCCTGTAGATCCCAGGATGATCAGGACATGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGCTCAAATAAGGATCTGATGAgtctagaaatcaataatagctTTCTGAGTGCCTCCCTAGTAAAGATCCTGTGTGAACAGATAGCCTCTGACAACTGTCATCTCCAGAGAGTGGTGTAAGTAGACACTAATTCATGAACTAAAATCCTAAGGGTGTGAAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47591795 401 + 50890351 TTCGTTCTTCTGTGATGCTGCTTAGGTGTTGAGTTGTGTGATGGTAGTGC---CAAATGATTAAATGGTCCAGCTTTCAGTTATACTTATTTCTACTTATTTGTTAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCCATGATGAACCTACA-----------------------TTGATGTAACCCC-----TTTCTCTTCCCTGTAGATCCCAGGATGACCAGGACATGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGCTCAAATAAGGATCTGATGGGTCTAGAAATCAATAACAGCTTTCTGAGTGCCTCCCTAGTGAGGATCCTGTGTGAACAGATAGCCTCTGACAGTTGTCATCTCCAGAGAGTGGTGTAAGCAGACACTAATTCATGAACTAAAATCCTAAGGCTGTGAAAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45946429 395 + 49145316 TTCTTTCTCCTGTGATGTGTCTTGGGCATTGAGTTGTCTGACAGTGGTGA---TAAATGATTAAATGGTCCAGCTTTCAATTC----------TACTTGTGTATTAGGGGTGTGTGCCCAGAGAAGCCCTAAACACTTTGGCCATGACGGATGCACG----------------------TTTGATGTGACCCC--CTTCTTCCTTTCCCTGCAGATCCCAGGATGATCAACACCTGCTTCCTTTCTGGACGGATCTTTGTTCCGTATTTGGCTCAAACAAGGATCTAATCACTCTAGAAATCAATAATAGCTTTCTTAGTGCCTCACTGTTACGGATCCTGTGTGAACAAATAGCTTCTGACACCTGTCATCTCCAGAGAGTGGTGTAAGTAGAAACTAATTCATGAACTAAAATCCTTAGGATGTGAAAGt i calJac3.chr22 I 481 I 305 s canFam3.chr1 20048792 415 - 122678785 --TTTTTTCCAGTGACATGTCTTAGGTGATGAATTGTCTGATAGTGACAC---TAAGTCATTAAATCATCTGACTTTTAGAGT------------TCTATTTACTAGGAGTGTGTGCCCAGAGCAACCCTAAATATCTTCATGATGTTGGACAAATGTTATATTTTCTCTCCAGCAATCTTTGGTAAATTCCTTCCTTTGCCTTTTCCCAACAGGTCCCAGAATGATCAACACGTGCTTCCTTTCTGGATAGACTTCTGTTCCATGTTTGACTCAAATAAAAACCTGATATTTCTAGACATCAGTCAGAGCTTCCTTAGTGCCTCATCTGTGAGAATTCTCTGTGAAAAAATAACCTCTGCTACCCATAATCTTCAGAAAGTGGTGTAAGTAGAAGCTAACCCCTGGATGAAAACCCCTAGGGCATAACCAA i canFam3.chr1 C 0 C 0 a score=-899.000000 s hg38.chr19_GL949747v2_alt 630466 2 + 729520 GG---- s panTro4.chr19 59899128 2 + 63644993 GG---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828273 2 + 60714840 GT---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341879 2 - 106955855 GT---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638191 2 + 64156825 GT---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55779244 2 + 59248254 GT---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47883653 2 + 51301725 GT---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47592196 2 + 50890351 GT---- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20049207 6 - 122678785 GCTCCT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45946824 305 + 49145316 I a score=121335.000000 s hg38.chr19_GL949747v2_alt 630468 37 + 729520 TACAATGTTAA-----------CATCGGAGCAATATTCAGATTCCTGT s panTro4.chr19 59899130 37 + 63644993 TACAATGTTAA-----------CATTGGAGCAATATTCAGATTCCTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828275 37 + 60714840 TACAATTTTAA-----------CGCTGTAACAATATTCAGATTCCTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341881 37 - 106955855 TACAATTTTAA-----------CATTGGAGCAATATTCAGATTCCTGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638193 37 + 64156825 TACAATTTTAA-----------TATTGGAACAATATTCAAATTCCTGT i rheMac3.chr19 C 0 I 304 s macFas5.chr19 55779246 37 + 59248254 TACAATTTTAA-----------TATTGGAACAATATTTAAATTCCTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47883655 37 + 51301725 TACAATTTTAA-----------TATTGGAACAATATTCAAATTCCTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47592198 37 + 50890351 TACAATTTTAA-----------TATTGGAACAGTATTCAAATTCCTGT i chlSab2.chr6 C 0 I 314 s calJac3.chr22 45947129 37 + 49145316 TACATTTTTAA-----------TATTGGAGCAATATTCAAATTCCTGT i calJac3.chr22 I 305 C 0 s canFam3.chr1 20049213 48 - 122678785 TACATTTTTAAGGCTCCATTTTTATTGGAGCAATATTTGAATTCCTTT i canFam3.chr1 C 0 C 0 a score=1808.000000 s hg38.chr19_GL949747v2_alt 630505 2 + 729520 AC s panTro4.chr19 59899167 2 + 63644993 AC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828312 2 + 60714840 CC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341918 2 - 106955855 CC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55779283 1 + 59248254 -C i macFas5.chr19 C 0 I 303 s papAnu2.chr19 47883692 1 + 51301725 -C i papAnu2.chr19 C 0 I 352 s calJac3.chr22 45947166 2 + 49145316 CC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20049261 2 - 122678785 TC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47592235 314 + 50890351 I e rheMac3.chr19 60638230 304 + 64156825 I a score=247639.000000 s hg38.chr19_GL949747v2_alt 630507 87 + 729520 TAGACTC---TTAAGTGCTCGAGACACAGGGAATTGAGAGAGTCCTGT---CCTTAAATTTATTTTGTGGGATAATCGTATAAAGTAATTT----------------CT s panTro4.chr19 59899169 87 + 63644993 TAGACTC---TTAAGTGCTCAAGACACAGGGAATTGAGAGAGTCCTGT---CCTTAAATTTATTTTGTGGGGTAATCGTATAAAGTAATTT----------------CT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828314 103 + 60714840 TAGACTC---TTAGGTGCTCAAGACACAGGGAATTGAGAGAGTCTTGT---CCTTAAATTTGTCTTGTGGGATAATCGTATAAAGTAATTTAGTAATTTAGAAATTACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341920 87 - 106955855 TAGACTT---TTAAGTGCTCAAGACACAGGGAATTGAGGGAGTCCTGT---CCTTAAATGTGTCTTGTGGGATAATCATATAAAGTAATTT----------------CT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638534 85 + 64156825 TAGACTC---TTAAGTGCTGAAGACACAGAGAATTGA--GAGTCCTGT---CCTTAAATTTGTCTCGTGGGATAATCGTAGAAAGTAATTT----------------TT i rheMac3.chr19 I 304 C 0 s macFas5.chr19 55779587 85 + 59248254 TAGACTC---TTAAGTGCTGAAGACACAGAGAATTGA--GAGTCCTGT---CCTTAAATTTGTCTCGTGGGATAATCGTAGAAAGTAATTT----------------TT i macFas5.chr19 I 303 C 0 s papAnu2.chr19 47884045 85 + 51301725 taGACTC---TTAAGTGCTCAAGACACAGAGAATTGA--GAGTCCTGT---CCTTAAATTTGTCTCGTGGGATAATCGTAGAAAGTAATTT----------------tt i papAnu2.chr19 I 352 C 0 s chlSab2.chr6 47592549 85 + 50890351 TAGACTC---TTAAGTACTCAAGACACAGGGAATTGA--GAGTCCTGT---CCTTAAATTTGTCTCATGGGATAATCGTATAAAGTAATTT----------------TT i chlSab2.chr6 I 314 C 0 s calJac3.chr22 45947168 88 + 49145316 TAGACTC----TAAGTGCTCAAGACACGAGGAATTGAGAGAGTCCTACCAGCCTTAAATTTGTCTTGTGGGATAATCATATAAAGTAACTT-----------------T i calJac3.chr22 C 0 C 0 s canFam3.chr1 20049263 86 - 122678785 CAGAATCCAACTGGGCATTCAAGACATAAGAAGTTGAGATGGTCCATA---CCATACATTTGTCTACTG----AAGCATATGAAGTAATTT----------------TT i canFam3.chr1 C 0 I 1652 a score=556.000000 s hg38.chr19_GL949747v2_alt 630594 2 + 729520 A-------------G s panTro4.chr19 59899256 2 + 63644993 A-------------G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828417 15 + 60714840 AAATTACTTTATACG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342007 2 - 106955855 A-------------G i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638619 2 + 64156825 A-------------G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55779672 2 + 59248254 A-------------G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47884130 2 + 51301725 a-------------g i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47592634 2 + 50890351 A-------------G i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947256 2 + 49145316 A-------------G i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I a score=230973.000000 s hg38.chr19_GL949747v2_alt 630596 106 + 729520 Gggctgggcatggtggttcacacttgtaattccaacacttcgggaggccgaggcagacagatcacttgaggtcaggagttcgagaccagcctggccaacgtgacaa s panTro4.chr19 59899258 106 + 63644993 Gggctgggcatggtggttcacacttgtaattccaacacttcgggaggccgaggcagacagatctcttgaggtcaggagttcgagaccagcctggccaacatgacaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828432 106 + 60714840 Aggcagggcatggtggttcacacctgtaattccaacacttcgggaggccgaggcagacagatcacttgaggtcaggagttcgagaccagcctggccaacattacaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342009 106 - 106955855 Gggctgggcatagtggttcacacctgtaattccaacacttcgggaggctgaggcagacagatcacttgaggtcaggagttcgagaccagcctggccaacatgacaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638621 106 + 64156825 Gggtcgggcacagtggctcacacctgtaattccaacacttcgggaggccgaggcagatagatcacttgaggtcaggagtttgagaccagcctggccaacatgacaa i rheMac3.chr19 C 0 I 46 s macFas5.chr19 55779674 106 + 59248254 Gggtcgggcacagtggctcacacctgtaattccaacattttgggaggccgaggcagacagatcacttgaggtcaggagttccagaccagcctagccaagatggcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47884132 105 + 51301725 gggccgggcatggtggctcacacctgtaattccaacactttgggaggccgaggcagacagatcacttg-ggtcaggagttccagaccagcctagccaagatggcaa i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45947258 106 + 49145316 Tggcagggcacagtggctcacaccagtaatctcagcactttgggaggctgaggcgtatggataacttgacataaggggttcaagaccagcctggccaacatggtga i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e chlSab2.chr6 47592636 0 + 50890351 C a score=130769.000000 s hg38.chr19_GL949747v2_alt 630702 82 + 729520 aaccctgcctctactaaaaata----caaaaattatccaggcgtggtggcaggcacctgtaatatcagctacttgggaggctgagg------- s panTro4.chr19 59899364 82 + 63644993 aaccctgcctctactaaaaata----caaaaattatccaggcgtggtggcaggcacctgtaatatcagctacttgggaggctgagg------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828538 82 + 60714840 aaccctgcctctactaaaaata----caaaaattatccaggcgtggtggcaggcacctgtaatatcagctacttgagaggctgagg------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342115 82 - 106955855 aactctgcctctactaaaaata----caaaaattatccaggcatggtgacaggcacctgtaatctcagctacttaggaggctgagg------- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55779780 82 + 59248254 aaccccgcctctactaaaaata----caaaaattatccgggcgtggtggcgggcgcctgtaataccagctacttcggaggctgagg------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47884237 82 + 51301725 aaccccgcctctactaaaaata----caaatattatccgggcgtggtggcgggcgcctgtaatagcagctacttcggaggctgagg------- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45947364 93 + 49145316 aaccccatctctactaaaaatatttttaaaaattagccagctctggtggcaggtgcctgtaatcccagctacttgggatgttgagggttgagg i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e chlSab2.chr6 47592636 0 + 50890351 C e rheMac3.chr19 60638727 46 + 64156825 I a score=105742.000000 s hg38.chr19_GL949747v2_alt 630784 130 + 729520 caggagaattacttgaacccaggaggcggaggt----tgcagtgaaccaagatcctgccactggactccagtctgagtgacagagcgagactgcgtctcaaaaaaaaaaaaaaa----aaaaaagaaaaagaaaaaaa s panTro4.chr19 59899446 123 + 63644993 caggagaattacttgaacccaggaggcggaggt----tgcagtgaaccgagatcctgccactggactccagtctgagtgacagagcgagactcggtctcaaaaaaaaaaaaaaa-----------aaagagaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828620 117 + 60714840 caggagaattgcttgaacccaggaggcggaggt----tgcagtgaaccaagatcttgccactagactccagtctgagtgacagagcgagactctgtctcaaaaaaaaaaaaaaa-----------------gaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342197 112 - 106955855 cgggagaattccttgaacccaggaggcggaggt----tgcagtgaaccgagatcctgccactggactccagcctgagtgacagagcgagactctgtctccaaaaaaaaaaGGCG----------------------GG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47884319 136 + 51301725 --taagagtcgcttgagtccgggaggtggagtttgcatgcagtgagctgagatcgcgccgctgtgctccagcctgcgcgacagagtgagactccatctcaaaaaaaaaaacaatctataaagatttaaaataaaaaaa i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45947457 112 + 49145316 caggagaattgcttgaacccaggaggcagaggt----tgcagtgagctgagatcatgccactgcactgcagcctgagcaaac-----agactccatctcaaaaaaaaaaaaaaG-----------------TTAAAAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e chlSab2.chr6 47592636 0 + 50890351 C e macFas5.chr19 55779862 0 + 59248254 C e rheMac3.chr19 60638727 46 + 64156825 I a score=166047.000000 s hg38.chr19_GL949747v2_alt 630914 149 + 729520 Gggccgggcacaatggctcacgcctgtagtcccagcactttgggggcccaagg-tggggggatcacttgaggtcaggagttcaagaccagcctggccaagatggtgcaagaccctgtctctacgaaaaatacaaaaatttgccaggtgtc s panTro4.chr19 59899569 149 + 63644993 Gggccgggcacaatggctcacgcctgtagtcccagcactttgggggcccaagg-cggggggatcacttgaggtcaggagttcaagaccagcctggccaagatggtgcaagaccctgtctctacaaaaaatacaaaaatttgccaggtgtc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828737 149 + 60714840 Gggccgggcacaatggctcacgcctgtagtcccagcacttcgggggcccaagg-cggagggatcacttgaggtcaggagttcaagaccagcctggccaagatggtgcaaaaccctgtctctactaaaaatacaaaaatttgctaggtgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342309 147 - 106955855 Gggccgggcacagtggctcacgcctgtaatcccagcactttgggggcccgagg-cggggggatcacctgaggtcaggagttcgagaccagcctggccaagatg--gcaaaaccctgtctctactaaaaatacaaaaatttgccaggcgtg i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47592636 146 + 50890351 Gggccgggcacggtggctcacacctgtaattccagcactttgggaggccaagg-cagacagatcacttgaagtcaggagttccagaccagcctagccaagatg--gcaaaaccccgcctctactaaaaatac-aaaattatccgggcgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947569 148 + 49145316 Gggctgggggcggtggctcacgcctggaatcccagcactttgggaagtcaaggccaggggaatcacttgaggtcaggagttcaagactaacctggccaagatg--gcaaaaccctatctctactaaaaatataaaaattagctgggcgag i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e papAnu2.chr19 47884455 0 + 51301725 C e macFas5.chr19 55779862 0 + 59248254 C e rheMac3.chr19 60638727 46 + 64156825 I a score=57877.000000 s hg38.chr19_GL949747v2_alt 631063 42 + 729520 gtggcaggtgcctataatcccagctactccggatgctgaggg s panTro4.chr19 59899718 42 + 63644993 gtggcaggtgcctataatcccagctactccggatgctgaggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828886 42 + 60714840 gtggcaggtgcctataatcccagctattccagatgctgaagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342456 42 - 106955855 gtggcaggtgcctataatcccagctactccggatgctgaggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638773 41 + 64156825 gtggcgggcgcctgtaataccagctacttcggaggccgagg- i rheMac3.chr19 I 46 C 0 s chlSab2.chr6 47592782 41 + 50890351 gtggcgggcgcctgtaataccagctactctggaggctgagg- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947717 41 + 49145316 gtggcaggcacctgtaactccaggaactcttgaggctgggg- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e papAnu2.chr19 47884455 0 + 51301725 C e macFas5.chr19 55779862 0 + 59248254 C a score=207987.000000 s hg38.chr19_GL949747v2_alt 631105 101 + 729520 --taggagtcgcttgaatccgggaggcagagtttgctttgcagtgagccgagatcgcgccactgcactc---cagcctgggcaacagagtgagactccatctcaaa s panTro4.chr19 59899760 104 + 63644993 --taggagtcgcttgaatccgggaggcagagtttgctttgcagtgagccgagatcgcgccactgcactccagcagcctgggcaacagagtgagactccatctcaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828928 101 + 60714840 --taggagtcacttgagtccgggaggcagagtttgctttgcagtgagccgagatcacgccactgcactc---cagcctgggcgacagagtgagactccatctcaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342498 101 - 106955855 --taggagttgcttgaatccaggaggcagagtttgctttgcagtgagcgaagatcgtgccactgcattc---cagcctgggcgacagagtgagactccatctcaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638814 100 + 64156825 --taagagtcacttgagtccgggaggtggagttcgc-atgcagtgagccgagatcgtgccactgcgctc---cagcctgtgcaacagagtgagactccatctcaaa i rheMac3.chr19 C 0 I 31 s macFas5.chr19 55779862 100 + 59248254 --taagagtcacttgagtccgggaggtggagtttgc-atgcagtgagctgagatcgtgccactgcgctc---cagcctgtgcgacagagtgagactccatctcaaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47592823 100 + 50890351 --taagagtcgcttgagtccgggaggtggagtttgc-atgcagtgagctgagatcgcgccactgcactc---cagcctgggcgacacagtgagactccatctcaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947758 96 + 49145316 caggagaatcacttgaatcagggagatgaaggttgc-----agtgagccgagatcatgccactgcactc---cagcctgggtgac--ggtgagactctatctcaaa i calJac3.chr22 C 0 I 3 e canFam3.chr1 20049349 1652 - 122678785 I e papAnu2.chr19 47884455 0 + 51301725 C a score=8350.000000 s hg38.chr19_GL949747v2_alt 631206 11 + 729520 ga---aaaaaaaaa s panTro4.chr19 59899864 11 + 63644993 ga---aaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829029 12 + 60714840 ga--gaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342599 14 - 106955855 gaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55779962 7 + 59248254 -------aaaaaaa i macFas5.chr19 C 0 I 2 s chlSab2.chr6 47592923 11 + 50890351 ---aaaaaaaaaaa i chlSab2.chr6 C 0 I 25 s calJac3.chr22 45947857 11 + 49145316 ---gaaaaagaaaa i calJac3.chr22 I 3 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e papAnu2.chr19 47884455 0 + 51301725 C e rheMac3.chr19 60638914 31 + 64156825 I a score=17182.000000 s hg38.chr19_GL949747v2_alt 631217 16 + 729520 TCTGTAAAGATGGACA s panTro4.chr19 59899875 16 + 63644993 TCTGTAAAGATGGACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829041 16 + 60714840 TTTGTAAAGATGGACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342613 16 - 106955855 TCTGTAAAGATGGACA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55779971 16 + 59248254 tatataaagatttaaa i macFas5.chr19 I 2 I 4 s calJac3.chr22 45947868 16 + 49145316 TCTGTAAAGATGGACA i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e chlSab2.chr6 47592934 25 + 50890351 I e papAnu2.chr19 47884455 0 + 51301725 C e rheMac3.chr19 60638914 31 + 64156825 I a score=1911.000000 s hg38.chr19_GL949747v2_alt 631233 1 + 729520 A s panTro4.chr19 59899891 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829057 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342629 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55779991 1 + 59248254 a i macFas5.chr19 I 4 I 1 s chlSab2.chr6 47592959 1 + 50890351 A i chlSab2.chr6 I 25 I 1 s calJac3.chr22 45947884 1 + 49145316 A i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e papAnu2.chr19 47884455 0 + 51301725 C e rheMac3.chr19 60638914 31 + 64156825 I a score=2104.000000 s hg38.chr19_GL949747v2_alt 631234 4 + 729520 AAAT s panTro4.chr19 59899892 4 + 63644993 AAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829058 4 + 60714840 AAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342630 4 - 106955855 AAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638945 3 + 64156825 aaa- i rheMac3.chr19 I 31 C 0 s macFas5.chr19 55779993 3 + 59248254 aaa- i macFas5.chr19 I 1 C 0 s chlSab2.chr6 47592961 3 + 50890351 AAA- i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45947885 4 + 49145316 AAAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e papAnu2.chr19 47884455 0 + 51301725 C a score=5576.000000 s hg38.chr19_GL949747v2_alt 631238 2 + 729520 TT s panTro4.chr19 59899896 2 + 63644993 TT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829062 2 + 60714840 TT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342634 2 - 106955855 TT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638948 2 + 64156825 tt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55779996 2 + 59248254 TT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47884455 2 + 51301725 tt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47592964 2 + 50890351 TT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947889 2 + 49145316 CT i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I a score=147935.000000 s hg38.chr19_GL949747v2_alt 631240 63 + 729520 AAACATGGAAAAAATAGTTCCTAAAGTTTAAATATATCG-----AGCCCCTGGTTTCCATTTAAGTAC s panTro4.chr19 59899898 63 + 63644993 AAACATGGAAAAAATAGTTCCTAAAGTTTAAATATATCG-----AGCCCCTGGTTTCCATTTAAGTAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829064 63 + 60714840 AAACATGGAAAAAATAGTTCCTAAAGTTTAAATATATTG-----AGCCCCTGGTTTCCATTTAAGTAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342636 63 - 106955855 AAACATGGAAAAAATAGTTGCTAAAGTTTAAATATATTG-----AGCCCCTGGTTTCTATTGAAGTAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638950 54 + 64156825 aaaCATGGAAAAAAT---------AGCCTAAATATATTG-----AGCCCCTAGTTTCTATTTAAGTAC i rheMac3.chr19 C 0 I 911 s macFas5.chr19 55779998 54 + 59248254 AAACATGGAAAAAAT---------AGCCTAAATATATTG-----AGCCCCTAGTTTCTATTTAAGTAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47884457 54 + 51301725 aaacatggaaaaaat---------agtctaaataTATTG-----AGCCCCTAGTTTCTATTTAAGTAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47592966 54 + 50890351 AAGCATGGAAAAAAT---------AGTCTAAATATATTG-----AGCCCCTAGTTTCTATTTAAGTAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947891 67 + 49145316 AAACATGGAGAAAAA-GTTTCTGAAGTTTAAATACATTGTTTTTAAACTTGTATTTCTGTTTAAGTGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20051001 56 - 122678785 aaaTATGAACAAAGT---TTCCAGTGTTTAAACCTGTTG----CAGCCCTTTGTTCTCATGTA----- i canFam3.chr1 I 1652 C 0 a score=3848.000000 s hg38.chr19_GL949747v2_alt 631303 3 + 729520 GAT s panTro4.chr19 59899961 3 + 63644993 GAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829127 3 + 60714840 GAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342699 3 - 106955855 GAC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55780052 3 + 59248254 AAC i macFas5.chr19 C 0 I 1009 s papAnu2.chr19 47884511 3 + 51301725 AAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47593020 3 + 50890351 AAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947958 3 + 49145316 AAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 20051057 0 - 122678785 C e rheMac3.chr19 60639004 911 + 64156825 I a score=3276.000000 s hg38.chr19_GL949747v2_alt 631306 1 + 729520 A s panTro4.chr19 59899964 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829130 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342702 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60639915 1 + 64156825 a i rheMac3.chr19 I 911 C 0 s macFas5.chr19 55781064 1 + 59248254 a i macFas5.chr19 I 1009 C 0 s papAnu2.chr19 47884514 1 + 51301725 A i papAnu2.chr19 C 0 I 707 s chlSab2.chr6 47593023 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947961 1 + 49145316 A i calJac3.chr22 C 0 C 0 e canFam3.chr1 20051057 0 - 122678785 C a score=263710.000000 s hg38.chr19_GL949747v2_alt 631307 95 + 729520 CAGGTGTACACACTAAAGATTTCAC-TTTCGTTC--------TCTTTTCCCTAGGTTCAAAAACA-TTTCCCCAGCTGATGCTCATCG--GAACCTCTGCCTAGCTC s panTro4.chr19 59899965 95 + 63644993 CAGGTGTACACACTAAAGATTTCAC-TTTCGTTC--------TCTTTTCCCTAGGTTCAAAAACA-TTTCCCCAGCTGATGCTCATCG--GAACCTCTGCCTAGCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829131 107 + 60714840 CAGGTGTACACACTAAAGATTTAACTTTTCGTTCTCTATGCGTCTTTTCCCTAGGTTCAAAAACATTTTCCCCAGCTGTATTTAATCGTCTAACCTCTGCCTAGCTC i ponAbe2.chr19 C 0 I 457 s nomLeu3.chr10 103342703 95 - 106955855 CAGATGTGTACACTCAAGATTTCAC-TTTCATTC--------TCTTTTCCCTAGGTTCAAAAACA-TTTCCCCAGCTGATGCTCTTCG--GAACCTCTGCCTAGCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60639916 90 + 64156825 caGGTATAGACACTCAAGATTTCAC-TTT-------------TGTTTTCCCTAGGTTCAAAAACA-TTTTCCCAGCTGATGCTTATCG--GAACCTCTGCCTAGCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55781065 90 + 59248254 caGGTATAGACAGTCAAGATTTCAC-TTT-------------TGTTTTCCCTAGGTTCAAAAACA-TTTTCCCAGCTGATGCTTATTG--GAACCTCTGCCTAGCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47885222 90 + 51301725 cAGGTATAGACACTCAagatttcac-ttt-------------tgttttcccTAGGTTCAAAAACG-TTTTCCCAGCTGATGCTCATCG--GAACCTCTGCCTAGCTC i papAnu2.chr19 I 707 C 0 s chlSab2.chr6 47593024 90 + 50890351 TAGGTATAGACACTCAAGATTTCAC-TTT-------------TGTTTTCCCTAGGTTCAAAAACA-TTTCCCCAGCTGATGCTCCTCG--GAACCTCTGCCTAGCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947962 93 + 49145316 GAGATACAGACACTCAACATTTCAC-TTTGGT----------GCTTTTTTCTAGGATCAAAAACA-TCTCCCCAGCTGATGCGTATCG--GAATCTCTGCCTAGCTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20051057 91 - 122678785 ----TATATAAATGCAAGATTTCAC-CTTTCTTA--------TCCTTTCCCTAGCCTCAAAAATA-TTTTCCCAGCAGACGCTTATAG--AAACTTCTGCATTGCTT i canFam3.chr1 C 0 C 0 a score=143331.000000 s hg38.chr19_GL949747v2_alt 631402 42 + 729520 TTCGAGGTCACAAGACTGTAACGTATCTGACCCTTCAAGGCA s panTro4.chr19 59900060 42 + 63644993 TTCGAGGTCACAAGACTGTAACGTATCTGACCCTTCAAGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829695 41 + 60714840 TTCGAGGTCACAAGACTGTAACGTATCTGA-CCTTCAAGGCA i ponAbe2.chr19 I 457 C 0 s nomLeu3.chr10 103342798 42 - 106955855 TTCGAGCTCACAAGACTGTAACGTATCTGACCCTTCAAGGCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60640006 42 + 64156825 TTCGAGGTCACAAGACTGTAACGCATCTGACCCTTCAAGGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55781155 42 + 59248254 TTCGAGGTCACAAGACTGTAACGCATCTGACCCTTCAAGGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47885312 42 + 51301725 TTCGAGGTCACAAGACTGTAACGCATCTGACCCTGCAAGGCA i papAnu2.chr19 C 0 M 50 s chlSab2.chr6 47593114 42 + 50890351 TTCGAGGTCACAAGACTGTAACACATCTGACCCTTCAAGGCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948055 42 + 49145316 TTCAAGGTCAAAAGACTGTAACATATCTAAGACTTCGAGGCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 20051148 42 - 122678785 TTGGTGGTCATGAGACTCTCACGCATCTGACTCTCCAAGGAA i canFam3.chr1 C 0 C 0 a score=109291.000000 s hg38.chr19_GL949747v2_alt 631444 42 + 729520 ATGACCAGGATGA-TATGTTTCCC-GCATTGTGTGAGGTCTTGA s panTro4.chr19 59900102 42 + 63644993 ACGACCAGGATGA-TATGTTTCCC-GCATTGTGTGAGGTCTTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829736 44 + 60714840 ATGACCAGAATGATTATGCTTCCCGGCATTGTGTGAGGTCTTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342840 42 - 106955855 ATGACCAGAATGA-TATGCTTCCC-ACATTGTGTGAGGTCTTGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60640048 42 + 64156825 CTGACCAGAAGGA-TATGCTTCCT-GCATTGTGTGAGGTCTTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55781197 42 + 59248254 CTGACCAGAAGGA-TATGCTTCCT-GCATTGTGTGAGGTCTTGA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47593156 42 + 50890351 CTGACCAGAAGGA-TATGCTTCCC-GCATTGTGTGAAGTCTTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948097 42 + 49145316 GTGCCCAGAACGA-TACGCTTCCT-GCACTGTGTGAGGTCCTGA i calJac3.chr22 C 0 C 0 s canFam3.chr1 20051190 42 - 122678785 ATGACCAGAATGA-TATGCTTCCC-ATTTTGTGTGAAATCTTGA i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47885354 50 + 51301725 M a score=795717.000000 s hg38.chr19_GL949747v2_alt 631486 252 + 729520 GACATCCAG-AATGTAACC-TGCGATATCTCGGGTATATCTC-TTAATCATTAAAATCCTTCATCATACAAACATAAGCTACCACAAGCTTATGTGGCAATTTTGTGTAAATAAGAA--------AAAGTTCGTTATTCTGACTAGAAACAGTA---CTAAGGGCAGATGACCCAGGATGCAGCATGGGCTGAACTTGAGTTTCTACTTGCCTTGAACAGTAAACACCCTGGACAACCATACGTGAGGACCCT------GAATCCAAAGAAA s panTro4.chr19 59900144 252 + 63644993 GACATCCAG-AATGTAACC-TGCGATATCTCGGGTATATCTC-TTAATCATTAAAATCCTTCATCATACAAACATAAgctaccacaagcttatgtggcaattttgtgtaaataagaa--------aaagttcgttattctgactagaaacagta---ctaagggcagatgacccaggatgcagcatgggctgaacttgagtttctacttgccttgaacagtaaacaacctggacaaccatacgtgaggaccct------gAATCCAAAGAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829780 253 + 60714840 GACATCCAGAAATGTAACCTTGCGATATCTCGGGTATATCTCTTTAATCATTAAAATGCTTCATCATACAAAC--Aggccaccacaagcttatatggcaattttgtgtaaataagaa--------aaagTTCGTTATTCTGACTAGAAACAGTA---CTAAGGGCAGATGACCCGGGATGCAGCATGGGCTGAACTTGAGTTTCTACTTGccttgagcagtgaacaacctggacaaccatacgtgaggaccct------gAATCCAAAGAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342882 249 - 106955855 GACATCCAG-AATGTAACC-TGCGATATCTCGGGTATATGTC-TTAATCATTAAAATCCTTCATCATACAAAC---AGCTACCACAAGCTTATATGGCAATTTTGTATAAACaagaa--------aaagttcattattctgactagaaacagta---ctaagggcagatgacccaggatgcagcatgggctgaacttgggtttctacttgccttgagcagtaaacaacctggacaaccatatatgaggaccct------gAATCCAAAGAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60640090 249 + 64156825 GACACCCAG-AATGTAACC-TGCGATATCTCGGGTATATCTC-TTCATCGTTAAAATCCTTCGTCCTACGAAC---AGCTACCACAAGCTTTTGTGGCAATTTTGTGTAAATGAGAA--------AAAGTTTGTTATTCTGACTAGAAACAGTA---CTAAAGGCAGATGACCCAGGAGACAGCATGGGCTGAACTTGAGTTTCTACCTGccttgagcagtaaacaacctggacaaccatacgtgaggaccct------gAATCTGAGGAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55781239 249 + 59248254 GACACCCAG-AATGTAACC-TGCGATATCTCGGGTATATCTC-TTCATCGTTAAAATCCTTCGTCATACGAAC---Agctaccacaagcttatgtggcaattttgtgtaaatgagaa--------aaagtttgttattctgactagaaacagta---ctaaaggcagatgacccaggagacagcatgggctgaacttgagtttctacctgccttgagcagtaaacaacctggacaaccatacgtgaggaccct------gAATCTGAGGAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47885406 254 + 51301725 GACACCCAG-AATGTAACC-TGCGATATTTCGGGTATATCTC-TTCATCGTCAAAATCCTTCGCCATACAAAC---AGCCGCCACAAGCTCATGTGGCAATTTTGTGTGAATG-GGA--------AAAGTCCGTTATTCTGACTAGAAACAGTA---CTAAAGGCAGATGACCCAGGAGACAGCATGGGCTGAACTCGAGTTTCTACTTGCCTTGAGCAGTAAACAACCTGGACAACCATACGTGAGGACCCTGAATCCGAATCCGAGGAAA i papAnu2.chr19 M 50 C 0 s chlSab2.chr6 47593198 249 + 50890351 GACACCCAG-AATGTAACC-TGCGATATCTTGGGTATATCTC-TTCATCATTAAAATCCTTCGTCATACAAAC---Agctaccacaagcttctgtggcaattttgtgtaaatgaaaa--------aaagttcgttattctgactagaaacagta---ctaaaggcagatgatccaggagacagcatgggctgaacttgagtttctacttgccttgagcagtaaataacctgggcaaccatacatgaggaccct------gAATCCGAGGAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948139 245 + 49145316 GGCACCCAA-AATGTAACC-TGCAGTATCTCGGGTACACCTC-TTCGTCATGAAAACCCTTCCTCATACCAGC---Agctaccac-agcttatacggcaattttgtgtcaattagga--------aaagttggtga--ctgactagaaacagta---ttaagggcagatgtcccaggatacagcatgggttgaacttgagtttccacttg-cttgagcagtgaacaacctggacaaccatacgtgaggaccct------gAGTCCAGAGAAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 20051232 262 - 122678785 GACACCCAA-AATGTAATC-TGCAATACCTCAGGTATATCTC-ACCATCACTGAAAACTTCCAGCATGTGAAC-AGAGTTCCTACAAGCCTATATAGCAATTTTGAATAAAGTAGGAGGGGTGGGGAAATCCCTTATTCTGATTAGAAACTGTACTCCTCCAGGCACATGCCACAGAACAGAAAATGGGCTAGACTTTAGTTTCCCCTTGTACTGATCATTGAGCAACCTGGGCAACCATCCACAACAGGCCT------GAGTCCAAAAAAA i canFam3.chr1 C 0 I 20 a score=762651.000000 s hg38.chr19_GL949747v2_alt 631738 323 + 729520 CTCCCAGAATC---TTTATC---------ATCttttttttttttttt-------------atgaagtcttgctctgttgcccaggccaaagtgcaatggcacgatcttggctcactgcaacctctgtctcctgggttcaagtaattctgctgcctcagcctcccaagttgctgggattacaggcacccgccaccacgcccggctaatttttgtgcattt-------------agtggagctggtttcgccaca-ttgccaggctgg-------------------------------tctcgaactcatgacctcaggtgacctgccctcctc-aggctcccaaagtgctgggattataggcatgagccaccatgcccagccAGAGTCCTTATG s panTro4.chr19 59900396 327 + 63644993 CTCCCAGAATC--ttttatc---------atcttttttttttttttttt----------aatggagtcttgctctgttgaccaggccaaagtgcaatggcacgatcttggctcactgcaacctctgtctcctgggttcaagtaattctgctgcctcagcctcccaagttgctgggattacaggcacccgccaccatgcccagctaatttttgtgcattt-------------agtggagctggtttcgccaca-ttgccaggctgg-------------------------------tctcgaactcatgacctcaggtgacctgcccccctc-aggctcccaaagtgctgggattataggcgtgagccaccatgcccagccAGAGTCCTTATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830033 333 + 60714840 CTCCCAGAATC---tttatc---------ttcctttttttttttttttt----ccttcagatggagtcttgctctgttgcccaagccgaagtgcagtggcacgatcttggctcactgcaacatctgcctcccaggttcaagtaattctgctgcctcagcctcccaagtagctgggattacaggcacccgccaccatacctggctaatttttgcgctttt-------------agtagagatggtttcgccaca-ttgccaggctgg-------------------------------tcttgaactcatgacctcagatgacctgccccccccgaggctcccaaagtgctgggattatagacgtgagccaccatgcccagccAGAGTCCTTATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103343131 337 - 106955855 CTCCCAGAATC---TTTATC---------ttctttttttttttttttttttttccttcagatggagtcttggtctgttgcccaggccgaagtgcaatggcacgatcttggctcactgcagcctctgcctcccgggttcaagtaattctgctgcctcagcctcccaagtagctgggatcacaggcacccgccaccacacctggctaatttttgtgctttt-------------agtagagatggttttgccacg-ttgccaggctgg-------------------------------tcttgaactcatgacctcaggtgacctgccccccctgaggctcccaaagcactgggattataagtgtgagccactatgcccagccAGAGTCCTTATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60640339 317 + 64156825 TTCCCAGAATC---tttatc---------------tttttttttttttt---------agatgaagtcttgccctgttgcccaggccgaagtacgatggcacaatcttgactcactgcaacctctgcccctcgagttcaactaatt---ctgcctcagcctcgcaagtagctgggattacaggcac---ccaccacgcccggctaacttctgtgctttt-------------agtagagactgttttggcacatttgccaggctgg-------------------------------tcttgaactcatgacctcaggtgacctgccccctctcaggctcccaaagtgctgggattataggcgtgagccactgtgcccagccAGAATCCGTATG i rheMac3.chr19 C 0 I 7 s macFas5.chr19 55781488 317 + 59248254 TTCCCAGAAtc---tttatc---------------tttttttttttttt---------agatgaagtcttgccctgttgcccaggccgaagtacgatggcacaatcttgactcactgcaacctctgcccctcgagttcaagtaatt---ctgcctcagcctcgcaagtagctgggattacaggcac---ccaccacgcccggctaacttctgtgctttt-------------agtagagactgttttggcacatttgccaggctgg-------------------------------tcttgaactcatgacctcaggtgacctgccccctctcaggctcccaaagtgctgggattataggcgtgagccactgtgcccagccAGAATCCTTATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47885660 319 + 51301725 TTCCCAgagtc---tttatc------------ttttttttttttttttt---------agatgaagtcttgccctgttgcccaggccgaagtACGATGGCACAATctttactcactgcaacctctgcccctcgggttcaagtaatt---ctgcctcagcctcccaagtagctgggattacaggcac---ccaccacgcccggctaacttctgtgctttt-------------agtagagactgtttCGGCACATttgccaggctgg-------------------------------tattgaactcatgacctcaggtga-ctgccccctctcaggctcccaaagtgctggcattataggcgtgagccaccgtgcccagccagaatccttatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47593447 331 + 50890351 TTCCCAGAATC---TTTTGCtttttttttttttttttttttttttttgt---------agatgaagtcttgccctgttgcccaggccaaagtgcaatggcatgatcttgactcactgcaacctctgcctccagggttcaagtaatt---ctgcctcagcctcccaagtagctgggattacaggcac---ccaccacgcccggctaacttctgtgctttt-------------agtagagact-tgtcggcacatttgccaggctgg-------------------------------tattgaactcatgacctcaggtgacctgccccctctcagcctcccaaagtgctgggattataggtgtgagccaccgtgcccagccAGAATCCTTATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948384 354 + 49145316 CTCCCAGAATCATCTTTACC---------tttttttttttttttttttt-----tttgagatgga----------gttgtccaggctggaatgcagtggcatgatctcagctcactgaaacctctgcctcccatgttcaagcaattctcctgcctcagcctcccaagtagctgagattacaggtgcctgccaaaacacccagctaacttttgtgcttttttttttcttttgaggcggag----tcttgctctg-tcaccaggctggaatgtggtagtgcaatcttggctcaccgcaacctctgcctcctgggttcaagtga-ttctcctgtctcagccttctgagtagctgggactgcagatatgaaccaacatgcccagctaa---------- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20051494 20 - 122678785 I a score=-2283.000000 s hg38.chr19_GL949747v2_alt 632061 31 + 729520 TTTTGGTTTTGGTTTTGGttttttctttt------tc s panTro4.chr19 59900723 29 + 63644993 TTTTGGTTTTGGttttttctttttctttt-------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830366 23 + 60714840 TTTTGGttttggt------tttttctttc-------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103343468 37 - 106955855 TTTTGGTTCTGGTTTTTTCTTTTCCTTTTtttttttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55781805 8 + 59248254 -------------TTCCCttt---------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47885979 16 + 51301725 -------------ttcccttttttttttt-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47593778 24 + 50890351 -------------TTCCCTttttttttttgttttttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948738 5 + 49145316 -------------------ttttt------------- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20051494 20 - 122678785 I e rheMac3.chr19 60640656 7 + 64156825 I a score=88794.000000 s hg38.chr19_GL949747v2_alt 632092 33 + 729520 ttttttctttttgagatggagtctcgctctgtc s panTro4.chr19 59900752 33 + 63644993 ttctttttttttgagatggagtctcgctctgtc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830389 33 + 60714840 ttttttttttttgagatggagtctcgctctgtc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103343505 33 - 106955855 ttttttttttttgaaatggagtctcactctgtc i nomLeu3.chr10 C 0 M 613 s rheMac3.chr19 60640663 33 + 64156825 ttttttttttttgagatggagtcttgctctgtc i rheMac3.chr19 I 7 C 0 s macFas5.chr19 55781813 33 + 59248254 ttttctttttttgagatggagtcttgctctgtc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47885995 33 + 51301725 ttttttttttttgagatggagtcttgctctgtc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47593802 33 + 50890351 tgttttttttttgagatggagtcttgctctgtc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948743 33 + 49145316 gtatttttagtagagatggagtttcaccatgtt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20051494 20 - 122678785 I a score=408333.000000 s hg38.chr19_GL949747v2_alt 632125 221 + 729520 acccaggctggagtgcgttggtatgatctcaggtcactgcagcctccacctcccaggttcaagtgattctcctgcctcagcctcctgagtagctgggattac--aggtgcacaccaccacacctggttaa-tttttgtattattagtagagatggagttttaccacattggccaggctggtctcgaactcatgacctcaggtgatctacccccc-cacccccacc s panTro4.chr19 59900785 221 + 63644993 accaaggctggggtgcaatggtatgatctcaggtcactgcagcctccacctcccaggttgaagtgattctcctgcctcagcctcctgagtagctgggattac--aggtgcataccaccacacctggttaa-tttttgtattattagtagagatggagttttaccacattggccaggctggtctcgaactcatgacctcaggtgatccacccgcc-cacccccacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830422 216 + 60714840 acccaggctggagtgcaatggtataatctgagctcactgcagcctccacctaccaggttcaagtgattctcctgcctcagcctcctgagtagctgggattac--aggtgcacaccaccacacctggttaa-tttttgtattcttagtagagatggagttttaccacattggccaggctggtctcgaactcatgacctcaggtgatccacc--cc-caccccc--- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60640696 211 + 64156825 tcccaggctggagtgcaatggcatgatctcagctcattgcaacctctacctcctgggttcaagtgattctcctgcatcagcctcctgagtagctgggagtac--aagcacgcgccaccatacctggttga-tttttgtattcttagtagaaatggggttttatcacattggccaggctggtctcgaactcatgacctcaggtgatccatcctcc----------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55781846 211 + 59248254 tcccaggctggagtgcaatggtatgatctcagctcattgcaacctctacctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggattac--aagcacgcgccaccatacctggttaa-tttttgcattcttagtagaaatggggttttatcacattggccaggctggtctcgaactcatgacctcaggtgatccatcctcc----------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47886028 211 + 51301725 tcccaggctggagtgcaatggtatgatctcagctcattgcaacctctacctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggattac--aagcacgcgccaccatacctggttaa-tttttgtattcttagtagaaatagggttttatcacattggccaagctggtctcgaactcatgaccccaggtgatccatcctcc----------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47593835 211 + 50890351 tcccaggctggagtgcaatggtatgatctccgctcattgcaacctctacctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggattac--aagcacgcgccaccatacctagttaa-tttttgtattcttagtagaaatggggttttatcacattggccaggctggtctcgaactcatgacctcaggtgatccatcctcc----------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948776 193 + 49145316 ggccaggctg-------------------------------atctcgaactcctgacctccaatgacccacccaccttggccttcaaaat-gctgggattaccaaagtgtgagccactgcgcctggctgattttttgtatttttagtagagacagggtttcaccatgttggccagtctggtctcaaactcctgacctcaagtgatctgctcacctcagccttacc i calJac3.chr22 C 0 N 0 e canFam3.chr1 20051494 20 - 122678785 I e nomLeu3.chr10 103343538 613 - 106955855 M a score=92288.000000 s hg38.chr19_GL949747v2_alt 632346 61 + 729520 ccaccccgccgtcggcctcccaaagtgaggcatgagccaccgtgcccagccCAGAATCTTT s panTro4.chr19 59901006 61 + 63644993 ctaccccgccgtcggcctcccaaagtgaggcgtgagccaccgtgcccagccCAGAATCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830638 50 + 60714840 -----------ccggcctcccaaagtggggtgtgagccaccgtgcccagccCAGAATCTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60640907 50 + 64156825 -----------tcggcctcccaaactggggcgtgagccaccgtgcccagccCAGAATCTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55782057 50 + 59248254 -----------tcggcctcccaaagtggggcgtgagccaccgtgcccagccCAGAATCTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47886239 50 + 51301725 -----------tcggcctcccaaagtggggcgtgagccactgtgcccggcccagaatcTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47594046 50 + 50890351 -----------tcggcctcccaaagtggggcgtgagccaccgtgcccggccCAGAATCTTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051494 20 - 122678785 I e nomLeu3.chr10 103343538 613 - 106955855 M a score=472308.000000 s hg38.chr19_GL949747v2_alt 632407 242 + 729520 ATCTTCTATCAGAGATCATTCACTCATGGTTCATGCTTCTCCTGTATGATGATTCAGAATACCAGCTATTG--------ACATTTTTCAAGCAAGAACCCTTCAGGAACATCAAGTTGCCCCTTTTCTGTTAGTCCTCTGGTTTGAGAGCTCTCCCCTTGGGAAGCTGTCCA-GTGGCTGCCCAGGCGATGAGAACCTACATGCATCATGGGGTTCCATGAAGCCTCACTTGGCCACACTGGTGTAGTAGG s panTro4.chr19 59901067 240 + 63644993 ATCTTCTCTCAGAGATCATTCACTCATGGTTCATGCTT---CTGTATGATGATTCAGAATACCAGCTATTG--------ACATTTTTCAAGCAAGAACCCTTCAGGAACATCAAGTTGCCCCTTTTCTGTTAGTCCTCTGGTTTGAGAGCTCTCCCCTTGGGAAGCTGTCCACGTGGCTGCCCAGGTGATGAGAACCTACATGCGTCATGGGGTTCCATGAAGCCTCACTTGGCCACACTGGTGTAGTAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830688 235 + 60714840 ATCTTCTATC--AGATCATTCACTCATGGTTCATGCTTCTCCTGTATGATGATTCAGAATACCAGCTATTG--------ACATTTTTCAAGCAAGAACCCTTCAGGAACATCAAGTTGCCCCTTTTCTGTTAGTCCTCTA--TTGAGAGCTCTCCCCTTGGGAAGCTGTCCACGTGGCTGCCCAGGTGATGAGAACCATCATGCA----AGGAGTTCATGAAGCCTCACTTGGCCACATTGGTGTAGTAGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60640957 241 + 64156825 AGCTTCTGTCAGAGATCATTCAC-CATGGTTCATGCTTCT-CTTTATGATGATTCAGAATACCGGCTATTG--------ACATTTTTCAAGCAAGATCCCTTCAGGAACATCGAGTTCCCCCTTTTCTGTTAGTCCTCTGGTTTGAGAGCTCTCCCCTTGGGAAGCTCTCCACGTGGCTGCCCAGGTGATGGGAACCGTCATGTGTCATGGGGTTCCGTGGAGCCTCACTTGGCCACACTGGCATAGTAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55782107 242 + 59248254 AGCTTCTGTCAGAGATCATTCAC-CATGGTTCATGCTTCTGCTGTATGATGATTCAGAATACCAGCTATTG--------ACATTTTTCAAGCAAGATCCCTTCAGGAACATCGAGTTGCCCCTTTTCTGTTAGTCCTCTGGTTTGAGAGCTCTCCCCTTGGGAAGCTCTCCACGTGGCTGCCCAGGTGATGGGAACCATCATGTGTCATGGGGTTCCGTGGAGCCTCACTTGGCCACACTGGCATAGTAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47886289 242 + 51301725 AGCTTCTGTCAGAGATCATTCAC-CATGGTTCATGCTTCTCCTGTATGATGATTCAGAATACCAGCTATTG--------ACTTTTTTCAAGCAAGATCCCTTCAGGAACATCGAGTTGCCCCTTTTCTGTTAGTCCTCTGGTTTGAGAGCTCTCCCCTTGGGAAGCTCTCCACGTGGCTGCCCAGGTGATGGGAACCATCATGTGTCATGGGGTTCCATGGAGCCTCACTTGGCCACACTGGCATAGTAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47594096 241 + 50890351 AGCTTCTGTCAGAGATCATTCAC-CATGGTTCATGCTTCTCCTGTATGATGATTCAGAATACCGGCTATTG--------ACATTTTTCAAGCAAGATCCCTTCAGGAACAGCGAGTTGCCCCTTTTCTGTTAGTCCTCTGGTTTGAGAGCTCTCCCCTTGGGAAGCTCTCCACGTGGCTGCCCAGGTGAT-GGAACCATCATGTGTCATGGGGTTCCATGGAGCCTCACTTGGCCACACTGGCATAGTAGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20051514 246 - 122678785 ATCCTCTATCAGAGAGAATTGGTTTATGGTT--TGTTTCTCCTGTC--ATGATTCAGAATACCAGATTCTGTCCAGTATCCTCTGTCCAGGCAAAGATACTTTGGGAGCAACAGATTTTCCTTCTCTTGGTAGTCCTCTGGGTTGAAAGATCTCCCCTTGGGATATTCTCCACATGATAGCTCTGGTGAGTATTGTCATTACTCATCATGGGGTTCCATTGATCCTCGCTTGACCACATTTG-ATAATAGG i canFam3.chr1 I 20 I 2524 e nomLeu3.chr10 103343538 613 - 106955855 M a score=83448.000000 s hg38.chr19_GL949747v2_alt 632649 53 + 729520 TGGTCATTGGCCTCAAATTATTGCCCTGggccaggcgcagtggctcacgcctg s panTro4.chr19 59901307 53 + 63644993 TGGTCATTGGCCTCAAATTATTGCCCTGggccaggcgcagtggctcacgcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830923 52 + 60714840 TGGTCATTGGCCTCAAATTATTGCCCTGggccaggcgcagtggctcacg-ctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60641198 51 + 64156825 TGGTCACTGGCCTC--ATTGTTCCCCTGggccaggcacagtaggtcacgtctg i rheMac3.chr19 C 0 I 347 s macFas5.chr19 55782349 51 + 59248254 TGGTCACTGGCCTC--ATTGTTCCCCTGggccaggcacagtaggtcacgtctg i macFas5.chr19 C 0 I 16 s papAnu2.chr19 47886531 53 + 51301725 TGGTCACTGGCCTCAAATTGTTCCCCTGGGCCAAACACAGTAGGTCACgcctg i papAnu2.chr19 C 0 I 16 s chlSab2.chr6 47594337 53 + 50890351 TGGTCACTGGCCTCAAATTGTTCCCCTGggccaggcacagtaggtcacgcctg i chlSab2.chr6 C 0 I 16 e canFam3.chr1 20051760 2524 - 122678785 I e nomLeu3.chr10 103343538 613 - 106955855 M a score=462741.000000 s hg38.chr19_GL949747v2_alt 632702 383 + 729520 ggaggccgaggtgggtggatcacttgaggtcaggagttcaagaccggcctggtcaacatggtgaaactctgtctctactaataatacaaaaa-----ttagctgggcatgttggcgcacgcctgtagtcccagctactcaggaggctgaggcaggagcatcatttgaacctgagaggcggaggttgcagtgagctgagatcacaccaccgcactccagtctgggcaacagtgtgagactgtctc-----------aaaaaaaaaaaaaaaaaTCTTggctgggtgcggtagctcatgcctgtaatcccagcactttgggaggccaaggcaggtggatcac--aaggtcaggagttcaagaccagcctggccaacatggtgaaaccccacgtctactaaaaa s panTro4.chr19 59901360 386 + 63644993 ggaggccgaggtgggtggatcacttgacgtcacgagttcaagaccggcctggtcaacatggtgaaactctgtctctactaataatacaaaaa-----ttagctgggcatgtttgcgcacacctgtagtcccagctactcaggaggctgaggcgggagcatcatttgaacctgagaggcggaggttgcagtgagctgagatcacaccaccgcactccagtctgggcaacagtgtgagactgtctcaa--------aaaaaaaaaaaaaaaaaaaCTTggctgggtgcggtagctcatgcctgtaatcccagcactttgggaggccaaggcaggtggatcac--aaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatgtctactaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830975 398 + 60714840 ggaggccgaggcgggtggatcacttgaggtcaggagttcaagaccagcctggtcaacatagtgaaaccccgtctctactaataatacaaaaattagcttagctgggcatgttggcgcgcgcctgtagtcccagctactcaggaggctgaggcaggagaatcatttgaacctgagaggcggaggttgccgtgagctgagatcacaccaccgcactccagcctgggcaacagtgtgagactgtctcaaaaataaataaataaataaataaaGAGTCTTggccgggtgcggtggctcatgcctgt-atcccagcactttgggaggccaaggtgggtggatcac--gaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatgtctactaaaaa i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55782416 386 + 59248254 ggaggctgaggc-agtgaatcacttgaagtcaggagttagaaaccagcctggttaacatggtgaaaccccgtctctactaataatacaaaaa-----ttagcgaggcgtgttggcacacgcctgtggtcccagttactcaggaggcggaggcaggagaatcatttaaacctgagaggcggaggttgcagtgagctgagatcgcaccactgcactccagcctggtcaacagtgcgagactatctca---------aaaaaaaaaaaaaaaaaaTCTTgaccgggtgcggtggctcatgcctgtaatgacagcacttcaggaggccaaggtgggtggatcacttgaggtcaggagttcaagaccagtctggccaacatggtgaaaccccatctctactaaaaa i macFas5.chr19 I 16 C 0 s papAnu2.chr19 47886600 383 + 51301725 ggaggctgaggc-agtgaatcacttgaagtcaggagttagaaaccagcctggttaacatggtgaaaccccgtctctactaataatacaaaaa-----ttagcggggcgtgttggcacacgcctgtagtcccagttactcaggaggcggaggcaggagaatcatttaaacctgagaggcggaggttgcagtgagctgagatcacaccactgcactccagcctggtcaacagtgcgagactatctc------------aaaaaacaaaaaaaaatcttggccgggtgcggtggctcatgcctataatcccagcacttcaggaggccaaggtgggtggatcacttgaggtcaggagttcaagaccggtctggccaacatggtgaaaccccatctctactaaaaa i papAnu2.chr19 I 16 C 0 s chlSab2.chr6 47594406 385 + 50890351 ggaggctgaggc-agtgaatcacttgaagtcaggagttagaaaccatcctggttaacatggtgaaaccccgtctctactaataatacaaaaa-----ttagcggggcgtgttggcacacgcctgtagtcccagttattcaggaggcagaggcaggagaatcatttaaacctgagaggcggaggttgcagtgagctgagatcacaccactgcactccagcctggtcaacagtgcgagactatctc----------aaaaaaaaaaaaaaaaaaTCTTggccgggtgcggtggctcatgcctataatcccagcatttcaggaggccaaggtgggtggatcacttgaggtcaggagttcaagaccagtctggccaacatggtgaaaccccatctctactaaaaa i chlSab2.chr6 I 16 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e nomLeu3.chr10 103343538 613 - 106955855 M e rheMac3.chr19 60641249 347 + 64156825 I a score=266322.000000 s hg38.chr19_GL949747v2_alt 633085 152 + 729520 tacaaaaacattagctgggcatggtggcgcgtgcctgtaatcccagctactcatggaggctgatgcaagagaattgcttgaacctaggaggcagaggtagcagtgagccaagatcacgccattgcactccagcctgggcaacagagcaaaac s panTro4.chr19 59901746 152 + 63644993 tagaaaaacattagccgggcatggtggcgcgtgcctgtaatcccagctactcgtggaggctgatgcaagagaattgcttgaacctaggaggcagaggtagcagtgagccaagatcacaccattgcactccagcctgggcaccagagcaaaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56831373 149 + 60714840 tacaaaaaaattagccgggcatggtggcgcgtgcctgtaatcccagctactt---gaggctgatgcaagagaattgcttgaacctaggaggcagaggtagcagtgagccaagatcatgccattgcactccagcctgggcaacagagcaaaac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60641596 152 + 64156825 tacaaaaatattagccgggcatggtggcaggcgcctgtaatcccagctactcgtgggggctgaggcaggagaattgcttgaacccaggaggcagaggttgcagtgagccaagatcacgccattgtactccagcctgggcaacagagcaaaac i rheMac3.chr19 I 347 C 0 s macFas5.chr19 55782802 152 + 59248254 tacaaaaatattagccgggcatggtggcaggcgcctgtaatcccagctactcgtgggggctgaggcaggagaattgcttgaacccaggaggcagaggttgcagtaagccaagatcacgccattgtactccagcctgggcaacagagcaaaac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47886983 149 + 51301725 tacaaaaatattagccgggcatggtggcaggcacctgtaatcccagctactc---ggggctgaggctggagaattgcttgaacccaggaggcagaggttgcagtgagccaagatcacgccattgtactccagcctgggcaacagagcaaaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47594791 152 + 50890351 tacaaaaatattagctgggcatggtggcgggtgcctgtaatcctagctactcgtgggggttgaggcaggagaattgcttgaacccaggaggcagaggttggagtgagccaagatcacgccattgtactccagcctgggcaacagagcaaaac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e nomLeu3.chr10 103343538 613 - 106955855 M a score=856502.000000 s hg38.chr19_GL949747v2_alt 633237 403 + 729520 tccatctcgaggacag-aaaaaaaaTTGATTGCTCTGGCTCTACTGAT-ACAATCTTAGGCTGCTTAATGGGATCTT------AGTTGAATAGGATGCTGTACATCTTACAGGTATTGGAAGGTTG-AATGAAA------CCAAGCCCATGCATTCAATAGTGGCTGCTATCATTACTAACCGTTGCAATTACCCTCTTTTCTT-TTTGCCTGAGAATAATGGGATGCAGGGTGAGGGGGAATATTGGGTGAATTAAAGATTTGGGTCACTAAtttcttt-ctttttttctcaagatatagtcttgctctgtctcctaggctggagtgcagtgccacaatcttggttcactgcaacctctgcctcccgggttcaagtgattcttctccgtcaacctcccaagtagctgggattacaggca s panTro4.chr19 59901898 406 + 63644993 tccatctcgaggacag-aaaaaaaaTTTATTGCTCTGGCTCTACTGAT-ACAATCTTAGGCTGCTTAATGGGATCTTC---TCAGTTGAATAGGATGCTGTACATCTCACAGGTATTGGAAGGCTG-AATGAAA------CCAAGCACATGCATTCAATAGTGGCTGCTGTCATTACTAACCGTTGCAATTACCCTCTTTTCTT-TTTGCCTGAGGATAATGGGATGCAGGGTGAGGGGGAATATTGGGTGAATTAAAGATTTGGGTAACTAAtttcttt-ctttttttctcgagatatagtcttgctctgtctcctaggctggagtgcagtgccacaatcttggttcactgcaacctctgcctcccgggttcaagtgattcttctccgtcaacctcccgagtagccgggattacaggca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56831522 407 + 60714840 tccatctcgaggacag-aaaaaaaaTTTATTGTTCTGGCTCTACTGAT-GAAATCTTAGGCTGCTTAATGGGATCTTC---TCAGTTGAATAGGATGCTGTACATCTCACAGGTATTTGAAGGTTG-AATGAAACCAAATCCAAGCACATGCATTCAATAGTGGCTGCTGTCATTACTAACCATTGC-ATTACCCTCTTTTCTTGTTTACATGAGAATAATGGAATGCAGGGTGAGGGGGAATATTGGGTGAATTAAAGATTTGGGTCACTAAttt------tttttttctcgagatatagtcttgctctgtctaccaggctggagtgcagtgccacagtcttggttcactgcaacctctgcctcctgggttcaagtgattcttctccgtcaacctctcgagtagctgggattacaggcA i ponAbe2.chr19 C 0 M 186 s nomLeu3.chr10 103344151 408 - 106955855 TCCATCTTGAGGACAGAAAAAAAAATTTATTGCTCTGGCTATACTGAT-ACAATCTTAGGCTGTTTAATGGGATCTTC---TCAGTTGAATAGGATGCTGTACATCTCACAGGTATT-GAAGGTTG-AATGAAACCAAATCCAAGCACAGGTATTCAATAGTGGCTACTGTCATTACTAACCATTACAATTACCCTCTTTTCTTTTTTACATGAGAATAATGGGATGCAGGGTGAGGGGGAATATTGGGTGAATTGAAGATTTGGGTCACTAAtttcttt-cttttttcctcgagatatagtcttgctctgtctcccaggc-----tgcagtgccacaatcttggttcactgcaacctctgcctcctgggttcaagtgattcttctgcgtcagcctcccaagtagctgggattacaggca i nomLeu3.chr10 M 613 C 0 s rheMac3.chr19 60641748 408 + 64156825 tccatctcaagggtaa-aaaaa------aTTGCTCTGGCTCTACTGATAACGATCCTAGGCTGCTTAATGGGATCTTCTTGTCAGTTGAATGGGATACTGTACGTCTCACAGGTATTTGAAGGTTGAAATGAAACCAGATCCAAGCCCATGTATTCAATAGTGGCTGCTGTCGTCACTAACCACTACAATTACCCTCTTTTCTTTGTTACATGAGAATAATGGGGTACAGGGTGAGGGGGAACATCGAGTAAATTAAAGATGTGGGTCACTAATCTAt---ttttttttctcgag--atagtcttgctctgtctcccaggctggagtgcagtgccacaatcttggttcactgcaacctcggcctcccaggttcaagtgattctcctgcctcaacttcctgagtagctgggattacaggca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55782954 407 + 59248254 tccatctcgagggtaa-aaaaa------aTTGCTCTGGCTCTACTGATAACGATCCTAGGCTGCTTAATGGGATCTTCTTGTCAGTTGAATGGGATACTGTACGTCTCACAGGTATTTGAAGGTTGAAATGAAACCAGATCCAAGCCCATGTGTTCAATAGTGGCTGCTGTCGTCACTAACCACTACAATTACCCTCTTTTCTTTGTTACATGAGAATAATGGGGTACAGGGTGAGGGGGAACATCGAGTAAATTAAAGATGTGGGTCACTAATCTA----ttttttttctcgag--atagtcttgctctgtctcccaggctggagtgcagtgccacaatcttggttcactgcaacctcggcctcccaggttcaagtgattctcctgcctcaacttcctgagtagctgggattacaggca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47887132 411 + 51301725 tccatctccagggtaa-aaaaa------aTTGCTCTGGCTCTACTGATAACGATCCTAGGCTGCTTAATGGGATCTTCTTGTCAGTTGAATGGGATACTGTACATCTCACAGGTATTTGAAGGTTGAAATGAAACCAGATCCAAGCCCATGTATTCAATAGTGGCTGCTGTCGTCACTAACCACTACAATTACCCTCTTTTCTTTGTTACATGAGAATAATGGGGTACAGGGTGATGGGGAACATCGAGTAAATTAAAGATGTGGGTCactaatctatttcttttttttctggag--gtagtcttgctctgtctcccaggctggagtgcagtgccacaatcttggttcactgcagcctcggcctcccaggttcaagtgattctcctgcctcaacttcctgagtaactgggattacaggca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47594943 409 + 50890351 tccatctcgagggtaa-aaaaa------aTTGCTCTGGCTCTACTGATAACGATCCTAGGCTGCTTAATGGGATCTTCTTGTCAGTTGAGTGGGATACTGTACATCTCACAGGTATTTGAAGGTTGAAATGAAACCAGATCCAAGCCCACGTATTCAATAGTGGCTGCCGTCATCACTAACCACTACAATTACCCTCTTTTCTTTGTTACATGAGAATAATGGGGTACAGGGTGAGGGGGAACATCGAGTAAattacagatgtgcgtcactaatctatc--tcttttttcttgag--atagtcttgctctgtctcccaggctggagtgcagtgccacaatcttggttcactgcaacctcggcctcccaggttcaagtgattctcctgcctcaacttcctgagtagctgggattacaggca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I a score=597560.000000 s hg38.chr19_GL949747v2_alt 633640 360 + 729520 cccacctgtatttttgtatttctagtattttgtatttctagtagagacagggttacgccatgctggtggccagggtggtctcaaactcctgacctcgggcaatccaccacacccagctaa-tttttggtatatttagtagagccggggtt--tcaccgtgttggctgggctggtctcgaactcctgacctcaagtga--CATCCATCTTCCAAAATgctgggattacagccatgtgccaccacgcccagctaattcttgtatttttaggagaaatggggtttcatcatgttgttccggctggtcttaaactcctggcctcatgatccacctgccttggcctgccaaagtcctgggattacaggca s panTro4.chr19 59902304 360 + 63644993 cccacctgtatttttgtatttctagtattttgtatttctagtagagacagggttacaccatgctggtggccagggtggtctcaaactcctgacctcgggcaatccaccacacccagctaa-tttttggtatatttagtagagccggggtt--tcaccgtgttggctgggctggtctcgaactcctgacctcaagtga--CATCCATCTTCCAAAATgctgggattacagccatgtgccaccacgcccagctaattcttgtatttttaggagaaatggggtttcatcatgttgtcccggctggtcttaaactcctggcctcatgatccacctgccttggcctgccaaagtcctgggattacaggca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103344559 362 - 106955855 cccggctgtattcttgtatttctaatattttgtatttctagtagagacagggttacaccatgctggtggccaaggtggtctcaaactcctgacctcaggcaatccaccacacccagctaa-tttttggtatatttagtacagccggggttaacaaacatgttggccaggctggtctcgaactcctgacctcaagtga--cacccatctTCCAAAATgctgggattacagccatgtgccaccatgcccagctaattcttgtatttttaggagaaacagggtttcatcatgttgtcctggctggtcttaaattcttggcctcatgatccacctgccttggcctgccaaagtgctcggattacaggca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60642156 346 + 64156825 cccagctgtat----------------ttttgtatttctagtagagacagggttacgccatgctggtggccagggtggtctcaaactcctgacctcggg-aatcccccacgcccagctaatttttttatgtctttagtagagatggggtt--tcaccatgttggccaggctggtctcgaactcctgacctcaagtgatccacctgccttccaaaatgctgggattacagccacgtgccaccctgcccagctaattcttgtatttttaggagaaacggggtttcatcatgttgtcctgcctggtcttaaactcctcgcctcatgatctacctgccttggcctgccaaagtactgggattacaggcA i rheMac3.chr19 C 0 M 331 s macFas5.chr19 55783361 346 + 59248254 cccagctgtat----------------ttttgtatttctagtagagacagggttacgccatgctggtggccagggtggtctcaaactcctgacctcggg-AATCCCCCACGCCCAGCTAAtttttttatgtctttagtagagatggggtt--tcaccatgttggccaggctggtctcgaactcctgacctcaagtgatccatctgccttccaaaatgctgggattacagccacgtgccaccctgcccagctaattcttgtatttttaggagaaacggggtttcatcatgttgtcctgcctggtcttaaactcctcgcctcatgatctacctgccttggcctgccaaagtactgggatcacaggca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47887543 345 + 51301725 cccagctgtat----------------ttttatatttctagtatagacagggttacaccatgctagtggccagggtagtctcaaactcttgaccttggg-aatcccccacgcccagctaa-ttttttatgtctttagtagagacggggtt--tcaccatgttggccaggctggtctcgaactcctgacctcaagtgatccacctgccttccaaaatgctgggattacagccacgtgccaccctgcccagctaattcttgtagtTTTAGGAGaaacgggatttcatcatgttgtcctggctggtcttaaactcctcgcctcatgatctacctgccttggcctgccaaagtactgggatcacaggca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47595352 345 + 50890351 cccagctgtat----------------ttttgtatttttagtagagacagggttacaccatgctggtggccagggtagtctcaaactcctgacctcggg-aatcccccacgcccagctaa-ttttttatgtctttagtagagacggggtt--tcaccatgttggccaggctggtctcgaactcctgacctcaagtgatccacctgccttccaaaatgctgggattacagccacgtgccaccctgcccagctaattcttgtatttttaggagaaacggggtttcatcatgttgtcctggctggtcttaaactcctcgcctcatgatctacctgccttggcctgccaaagtactgggatcacaggca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e ponAbe2.chr19 56831929 186 + 60714840 M a score=15048.000000 s hg38.chr19_GL949747v2_alt 634000 12 + 729520 tgagccactgtg s panTro4.chr19 59902664 12 + 63644993 tgagccactgtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103344921 12 - 106955855 tgagccactgtg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55783707 12 + 59248254 tgagccaccatg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47887888 12 + 51301725 tgagccaccatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47595697 12 + 50890351 tgagccaccatg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e ponAbe2.chr19 56831929 186 + 60714840 M e rheMac3.chr19 60642502 331 + 64156825 M a score=533922.000000 s hg38.chr19_GL949747v2_alt 634012 363 + 729520 cccagccACTCATTTCTTATGAATTTATTCTAACACATTTTCCGGATGAA--CAGGGCACCTTGAAACATAGGTTAGTGggctgggta--------tggtggctcctgcctgtaatcccagtactttgggaggcctaggctggtgtatcgcttgaagtcaggagttt---tttgttttgagacggagtcttgctctgtcgcccaggctagagtgcagtgg------------------------------agtgatctcggcttactgcaacctccgcctcctgggttcaagtgattctcttgcctcagcctcctgagtagctgggactacaggcacgtgtcgccacgcccatctaa----------cttttgtatgtttagtagagccggggtttcaccatgttggccaggatgg s panTro4.chr19 59902676 363 + 63644993 cccagccACTCATTTCTTATGAATTTATTCTAACACATTTTCCGGATGAA--CAGAGCACCTTGAAACATAGGTTAGTGggctgggta--------tggtggctcctgcctgtaatcccagtgctttgggaggcctaggctggtgtatcgcttgaagtcaggagttt---tttgttttgaaacggagtcttgctctgtcgcccaggctagactgcagtgg------------------------------agtgatctcggcttactgcaacctccgcctcctgggttcaagtgattctcttgcctcagcctcctgagtagctgggactacaggcacgtgtcaccacgcccatctaa----------cttttgtatgtttagtagagccggggtttcaccatgttggccaggatgg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103344933 370 - 106955855 cctagccACTCATTTCTTATGAATGTATTCTAACACATTTTCTGGATGAA--CAGAGCACCTTGAAACATAGGTTAGTGGGCTGGGCACTGTGGGTTAgtggctcatgcctgtaatcccagtactttgggaggcctaggctggtgtatcacttgaagtcaggagttt---tttgtattgagacagagtcttgctctgttgcccaggctagagtgcagtgg------------------------------agtgatctcggctcattgtaacctctgcctcctgggttccagtgattctcttgcctcagcctcccgagtagctgggactacaggcacgtgtcgccacgcccagctaa----------ttttggaatg-ttaataaaaatgggggttctccctggttgtcagactgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60642833 345 + 64156825 CCCAGCCACTCATTTCTTACGAATTTATTCTAACACATTTTCCGGATGAACACAGAGCACCTTGAAACGTAGGTTAGTGgactgggca--------tggtgcctcatacctgtaatcccagtactttgggaggcctaggctggtgtatcacttgaagtcaggagtttttgtttgttttgagatggagtcttgctctgtcacccaggctggagtgcagtggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-----------------------------tcccaggttcaagca---attctgccttagcctcctgagtagttgggactacaggtgcgcgccaccacacccagctaa----------ttttcgtatgtttagtagagctggggtt--------------------- i rheMac3.chr19 M 331 C 0 s macFas5.chr19 55783719 343 + 59248254 cccagccACTCATTTCTTACGAATTTATTCTAACACATTTTCCAGATGAACACAGAGCACCTTGAAACGTAGGTTAGTGgactgggca--------tggtgcctcatacctgtaatcccagtactttgggaggcctaggctggtgtatcacttgaagtcaggagtttttgtttgttttgagatggagtcttgctctgtcacccaggctggagtgcagtgg------------------------------agtgatcttggctcactgcaacctccacctcctgggttcaatt----ctcttgcctcagcctcctgagtagctgggactacaggcatgcgccaccacacccagctaa----------ttttcgtatgtttagtagagctggggtt--------------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47887900 374 + 51301725 cccagccactcaTTTCTTACGAATTTATTCTAACACATTTTCCGGATGAACGCAGAACACCTTGAAACGTAGGTTAGtggactgggca--------tggtgcctcatacctgtaatcccagtactttgggaggcctaggctggtgtatcacttgaagtcaggagtttttgtttgttttgagatggagtcttgctctgtcgcccaggctggagtgcagtgg------------------------------agtgatcttggctcactgcaacctccacctcctgggttcaatt----ctcttgcctcagcctcctgagtagctgggactacaggcatgcgccaccacgcccagctaatttcttttcttttctttttttttttttgagacggagtctcgctctgtcgcccaggctgg i papAnu2.chr19 C 0 I 563 s chlSab2.chr6 47595709 343 + 50890351 cccagccACTCATTTCTTACGAATTTATTCTAACACATTTTCCAGATGAACACAGAGCACCTTGAAACATAGGTTAGTGgactgggca--------tggtgcctcctacctgtaatcccagtactttgggaggcctaggctggtgtatcacttgaagtcaggagtttttgtttgttttgagatggagtcttgctctgtcgcccaggctggagtgcagtgg------------------------------agtgatcttggctcactgcaacctccacctcctgggttcaatt----ctcttgcctcagcctcctgagtagctgggactacaggcatgtgccaccacgcccagctaa----------ttttcgtatgtttagtagagctggggtt--------------------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e ponAbe2.chr19 56831929 186 + 60714840 M a score=22839.000000 s hg38.chr19_GL949747v2_alt 634375 18 + 729520 tctcaaactcctgacctc s panTro4.chr19 59903039 18 + 63644993 tctcaaactcctgacctc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103345303 18 - 106955855 tcccaaactcccaacctc i nomLeu3.chr10 C 0 M 3096 s rheMac3.chr19 60643178 18 + 64156825 tctcgaactcctgacctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784062 18 + 59248254 tctcgaactcctgacctc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47596052 18 + 50890351 tctcgaactcctgacctc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e ponAbe2.chr19 56831929 186 + 60714840 M e papAnu2.chr19 47888274 563 + 51301725 I a score=54710.000000 s hg38.chr19_GL949747v2_alt 634393 64 + 729520 ctgatctgcccacctcggcctcccaaagtgctgggattacaggcatgagccattgccccggccA s panTro4.chr19 59903057 64 + 63644993 ccgatctgcccacctcggcctcccaaagtgctgggattacaggcatgagccattgccccggccA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60643196 64 + 64156825 gtgatctgcccgcctcggcctcccaaagtgttgggattacaggtgtgcgccattgccctggccA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784080 64 + 59248254 gtgatctgcccgcctcggcctcccaaagtgttgggattacaggtgtgcgccattgccctggccA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47596070 64 + 50890351 atgatctgcccgcctcggcctcccaaagtgttgggattacaggtgtgcgccattgccctggccA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e ponAbe2.chr19 56831929 186 + 60714840 M e nomLeu3.chr10 103345321 3096 - 106955855 M e papAnu2.chr19 47888274 563 + 51301725 I a score=284334.000000 s hg38.chr19_GL949747v2_alt 634457 234 + 729520 aagttaggagtttgagaccagcctggccaacatggtaaaaccccatctctactaaaaaatacaaaaattagccaggcaagatggcatttgcctgtaatcccagctactcaggaggctgaggcgggagaatctcttgaatctgggaggcagaggttgctgtgagctgagatcgcgccactacactccagccagggcgacagagcataaataactccctttcaaaaaaCCAAACAA s panTro4.chr19 59903121 234 + 63644993 aagttaggagtttgagaccagcctggccaacatggtaaaaccccatctctactaaaaaatacaaaaattagccaggcaagatggcatttgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaatccaggaggcagaggttgctgtgagctgagatcacgccactacactccagccagggcgacagagcataaataactccctttcaaaaaaCCAAACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56832115 234 + 60714840 aagttaggagtttgagaccagcctggccaacatggtaaaaccccatctctactaaaaaatagaaaaattagctaggcaagatggcattcgcctgtaatcccagccactcaggaggctgaggcgggagaatctcttgaatccaggaggcagaggttgctgcgagctgagatcgcgccactacactccagccagagtgacacagcataaataactccctttcaaaaaaccaaacaa i ponAbe2.chr19 M 186 C 0 s rheMac3.chr19 60643260 229 + 64156825 aagttaggagtttgagaccaggctggccaacatggtgaaaacccgtctctact-aaaaatacaaaaattagccaggcaagagggcacgcgtctgtaatcccagctactcgggaggctgagacaggagaattgcttgaatccaggaggcagaggttgctgtgagctgagattatgccactacactccagcctgggtgacacagc----ataattccctttcaaaaaaccaaacaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784144 229 + 59248254 aagttaggagtttgagaccaggctggccaacatggtgaaaacccgtctctact-aaaaatacaaaaattagccaggcaagatggcacgcatctgtaatcccagctactcgggaggctgagacaggagaattgcttgaatccaggaggcggaggttgctgtgagctgagattatgccactacactccagcctgggtgacacagc----ataattccctttcaaaaaaccaaacaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47596134 229 + 50890351 aagttaggagtttaagaccaggctggccaacatggtgaaaacccgtctctact-aaaaatacaaaacttagccaggcaagatggcacgcgcctgtaatcccagctactcgggaggctgagacaggagaattgcttgaatccaggaggcggaggttgctgtgagctgagattatgccactacactccagcctgggtgacacagc----ataattccctttcaaaaaaccaaacaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e nomLeu3.chr10 103345321 3096 - 106955855 M e papAnu2.chr19 47888274 563 + 51301725 I a score=202859.000000 s hg38.chr19_GL949747v2_alt 634691 150 + 729520 TGAAACATAGGTTAGCGGAGTCTGCATCCAACATTAGAGTCAGATTGACTAAG--Ttctgtatttccagctgattcctgggcgatgttggtgccactggtct---gaccaccctttgacaactgctgctccagataattcaagtcggggtataac s panTro4.chr19 59903355 150 + 63644993 TGAAACATAGGTTAGCGGAGTCTGCATCCAACATTAGAGTCAGATTGACTAAG--Ttctgtatttccagctgattcctgggcgatgttggtgccgctggtct---gaccaccctttgacaactgctgTTCCAGATAATTCAAGTCGGGGTATAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56832349 148 + 60714840 tgaaaCA-----TAGCGGACTCTGCATCCAACATTAGAGTAAGATTGACTAAG--TTCTTTatttccagctgattcctgggcgatgttgatgccgctggtctggggaccaccctttgacaactactgCTCCAGATAATTCAAGTCGGGGTATAAC i ponAbe2.chr19 C 0 I 557 s rheMac3.chr19 60643489 155 + 64156825 tgaaacataggttagtggactctgcatccaacatttgagtcaggttgactgaggctcatgtatttccagctgattcctggacaatgctgatgccactggtctggggaccatcctttgacaatcactgCTCCAGATAATTCAATTCGGGGTGTAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784373 155 + 59248254 tgaaacataggttagtggactctgcatccaacatttgagtcaggttgactgaggctcatgtatttccagctgattcctggacaatgctgatgccactggtctggggaccatcctttgacaatcactgCTCCAGATAATTCAAGTCGGGGTGTAAC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47596363 155 + 50890351 tgaaaCATAGGTTAGTGGACTCTGCATCCAACATTTGAGTCAGGTTGActgaggttcatgtatttccagctgattcctggacaatgctgatgccactggtctggggaccatcctttgacaatcactgCTCCGGATAATTCAAGTCGGGGTGCAAC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054284 138 - 122678785 TAAAACAGAAATCAGTGgattctgcatctggagttt------------ctgaggatt-tgtgtttctaactgcttgccagatgatgctgatgcagctggtccagggatcacactttg----ccactgCTCTATGTAATTTATTCTAGGACATGAC i canFam3.chr1 I 2524 C 0 e nomLeu3.chr10 103345321 3096 - 106955855 M e papAnu2.chr19 47888274 563 + 51301725 I a score=49156.000000 s hg38.chr19_GL949747v2_alt 634841 56 + 729520 acaac------cagtgagatgtaaacc-aaagacgattccacg-gttagattctcaagaatgaC s panTro4.chr19 59903505 56 + 63644993 ACAAC------CAGTGAGATGTAAACC-AAAGACGATTCCGCG-GTTAGATTCTCAAGAATGAC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60643644 56 + 64156825 ATAAC------CAGTGAGATATAAATC-AAAGATGATTCCGTG-ATTAGATTCTCAAGAATAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784528 56 + 59248254 ATAAC------CAGTGAGATATAAATC-AAAGATGATTCCGTG-GTTAGATTCTCAAGAATAAC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47596518 56 + 50890351 ATAAC------CAGTGAGCTATAAATC-AAAGATCATTCCGTG-GTTAGATTCTCAAGAATAAC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054422 64 - 122678785 ATAATGTGGTAAAATGAGGGGTAAACCTGGAGACTGTATCAAGCGTTTGGTTATCAAGAATGAT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56832497 557 + 60714840 I e nomLeu3.chr10 103345321 3096 - 106955855 M e papAnu2.chr19 47888274 563 + 51301725 I a score=8313.000000 s hg38.chr19_GL949747v2_alt 634897 7 + 729520 TTGTTCT s panTro4.chr19 59903561 7 + 63644993 TTGTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833054 7 + 60714840 TTGTTCT i ponAbe2.chr19 I 557 C 0 s rheMac3.chr19 60643700 7 + 64156825 GTATTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784584 7 + 59248254 GTATTCC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47596574 7 + 50890351 GTATTCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054486 7 - 122678785 GTGTTCT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103345321 3096 - 106955855 M e papAnu2.chr19 47888274 563 + 51301725 I a score=211631.000000 s hg38.chr19_GL949747v2_alt 634904 162 + 729520 ---------gccgggcgcggtggctca-cgcctgtcatcccagcactctgggaggccgaggtgggcagatcacctgagattgggagtttgagaccagcctgaccaacatggagaga--cccccacctctactgaaaatacaaaattagctgggcatgttggtgcatggtgcatg s panTro4.chr19 59903568 157 + 63644993 ---------gccgggcgcggtggctca-cgcctgtcatcccagcactttgggaggccgaggtgggcagatcacctgaggttgggagtttgagaccagcctgaccaacatggagagacccccccacctctactgaaaatacaaaattagctgggcatg-----gc--ggtgcatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833061 154 + 60714840 ---------gccgggcgcagtggctcg-cgcctgtcatcccagcactttgggaggccgaggtgggcagatcacctgaggttgggagtttgagaccagcctgaccaacatggagaga---ccccacctctactgaaaatacaaaaatagctgggcatg-----gt--ggtgcatg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60643707 154 + 64156825 ---------gctgggcacgctggctta-cgcctgtaatcccagcacgttgggagaccaaggcaggtggatcgcctgaggtcaggaggtcgagaccagcctgaccaacgtggagaaa---ccccgtctctactaaaaatacaaaatcagccaggcgtg-----gt--ggtgcatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784591 154 + 59248254 ---------gctgggcacgctggctta-cgcctgtaatcccagcacgttgggagaccaaggcaggtggatcgcctgaggtcaggaggtcgagaccagcctgaccaacgtggagaaa---ccccgtctctactaaaaatacaaaatcagccaggcgtg-----gt--ggtgcatg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3467929 142 - 51301725 ---------gccaggtgtggtggctca-cacctgtaatcccagcactttgagaggccgaggtgggtggattacctgaggtcgggagttcaagaccagcatggtcaacatggtgaaa---tcccatctctactaaaaatacaaaa------------a-----tt--ggcgtgtg i papAnu2.chr19 I 48039 C 0 s chlSab2.chr6 47596581 154 + 50890351 ---------gctgggcacgctggctaa-cgcctgtaatcccagcacgatgggagaccaaggcaggtggatcgcctgaggtcaggagtttgagaccagcctgaccaacgtggagaaa---ccccgtctctactaaaaatacaaaatcagccgggcgtg-----gt--ggtgcatg i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054493 106 - 122678785 gggatccctgggtggcgcagtggtttagcgcctgc----------ctttg---gcccagggcg---cgat--cctggagacctgggatcgaatcc-----------catgttgggc---tcccggtgc----------------------------------at--ggagcctg i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103345321 3096 - 106955855 M a score=11228.000000 s hg38.chr19_GL949747v2_alt 635066 4 + 729520 cctg s panTro4.chr19 59903725 4 + 63644993 cctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833215 4 + 60714840 cctg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3654594 4 + 106955855 cctg i nomLeu3.chr10 I 3527 C 0 s rheMac3.chr19 60643861 4 + 64156825 cctg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784745 4 + 59248254 cctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3468071 4 - 51301725 cctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47596735 4 + 50890351 cctg i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054599 4 - 122678785 cttc i canFam3.chr1 C 0 I 84 a score=166148.000000 s hg38.chr19_GL949747v2_alt 635070 83 + 729520 cagtcccagctactcgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgctgtgagccgagat--------tgcgcc-----------a s panTro4.chr19 59903729 83 + 63644993 cagtcccagctactcgggaggctgaggcaggagaatcacttgaacccaggaggcagaggttgctgtgagccaagat--------tgcgcc-----------a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833219 83 + 60714840 cagtcccagctactcgggaggctgaggcaggaatatcagttgaacccaggaggcagaggttgctgtgagccgagat--------cgcgcc-----------a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3654598 94 + 106955855 tcatcccagctacttgggaggctgaggcagaagaatggcttgaacccgggaggcggaggctgcagtgaggtgagat--------cacacctttgcactccag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60643865 91 + 64156825 caatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggtggcggaggttgctatgagctgagactgccattgcattcc-----------a i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55784749 91 + 59248254 caatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggtggcggaggttgctgtgagctgagactgccattgcattcc-----------a i macFas5.chr19 C 0 I 1 s papAnu2.chr19 3468075 83 - 51301725 taatcccagctgcttgggaggctgaggcaggagaattgcttgaacccgggaggtggaggctgcagtgaggtgagat--------cacgcc-----------a i papAnu2.chr19 C 0 I 6558 s chlSab2.chr6 47596739 83 + 50890351 caatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggtggcggaggttgctgtgagccgagac--------tgtgcc-----------a i chlSab2.chr6 C 0 I 11 e canFam3.chr1 20054603 84 - 122678785 I a score=55278.000000 s hg38.chr19_GL949747v2_alt 635153 37 + 729520 cctgggcaacaagagtgagactcagtctc----------aaaaa----aaa s panTro4.chr19 59903812 31 + 63644993 cctgggcaacaagagtgag----agtctc------------aca----aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833302 47 + 60714840 cctgggcaacaagagtgagactcagtctcaaaaaaaaaaaaaaa----aaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3654692 42 + 106955855 actgggcaac-agagtgaaactctgtctc----aaaaaaaaaaa----aaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60643957 42 + 64156825 cctgggcaacaagagtgagactccgtctc---------aaaaaaaaacaaa i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55784841 38 + 59248254 cctgggcaacaagagtgagactccgtctc---------aaaaaa----aaa i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47888837 38 + 51301725 cctgggcaacaagactgagactccgtctc---------aaaaaa----aca i papAnu2.chr19 I 563 C 0 s chlSab2.chr6 47596833 35 + 50890351 cctgggcaacaagactgagactccgtcac---------aaaaaa------- i chlSab2.chr6 I 11 C 0 e canFam3.chr1 20054603 84 - 122678785 I a score=49099.000000 s hg38.chr19_GL949747v2_alt 635190 30 + 729520 aaaaaaaaTG------------ACGTGGTCCT------------ATTTCTCCCA s panTro4.chr19 59903843 30 + 63644993 aaaaaaaaTG------------ACGTGGTCCT------------ATTTCTCCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833349 30 + 60714840 aaaaaaaaTG------------ACTTGGTCCT------------ATTTCTCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3654734 54 + 106955855 aaaaaaaaGGCTGATAGGGTGTACTCTGTCCTCCCAGAAGAATGACTTTTCCCA i nomLeu3.chr10 C 0 I 1131 s rheMac3.chr19 60643999 30 + 64156825 aaaacaaaaa------------aCTTGTTCCC------------ATTTCTCCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784879 30 + 59248254 aaaaaaaaaa------------aCTTGTTCCC------------ATTTCTCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47888875 30 + 51301725 caacaaaaaa------------acttgtTCCC------------ATTTCTCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47596868 23 + 50890351 -------aaa------------aCTTGTTCCC------------ATTTCTCCCA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054687 30 - 122678785 AAAAAAAATA------------ATGTGTTCCC------------ATTCTTCTGG i canFam3.chr1 I 84 C 0 a score=401368.000000 s hg38.chr19_GL949747v2_alt 635220 168 + 729520 CAGGTTGGTGTCTTGTTCCGCTACCACTCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGTCAACCAGTCCCTGACGTGCGTAAACCTCTCCGACAATGAGCTTCTGGATGAGGGTGCTAAGTTGCTGTACACAACTTTGAGACACCCCAAGTGCTTTCTGCAGAG s panTro4.chr19 59903873 168 + 63644993 CAGGTTGGTGTCTTGTTCCGCTACCACTCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGTCAACCAGTCCCTGACGTGCGTAAACCTCTCCGACAATGAGCTTCTGGATGAGGGTGCTAAGTTGCTGTACACAACTTTGAGACACCCCAAGTGCTTTCTGCAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833379 168 + 60714840 CAGGTTGGTGTCTTGTTCCACTACCACTCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGTCAACCAGTCCCTGACGTGCGTAAACCTCTCCGACAATGAGCTTCTGGATGAGGGTGCTAAGTTGCTGTACACAACTTTGAGACACCCCAAGTGCCTTCTGCAGAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60644029 168 + 64156825 CAGGCTGGTGTCTTGTTCTGCTACCACCCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGCCAACCGGTCCCTGATGTGCGTAAACCTCTCCGACAGTGAGCTCCTGGATGAGGGTGCCAAGTTGCTGTACACAACTTTGAGGCACCCAAAGTGCTTCCTGCAGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784909 168 + 59248254 CAGGCTGGTGTCTTGTTCTGCTACCACCCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGCCAACCGGTCCCTGATGTGCGTAAACCTCTCCGACAATGAGCTCCTGGATGAGGGTGCCAAGTTGCTGTACACAACTTTGAGGCACCCAAAGTGCTTCCTGCAGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47888905 168 + 51301725 CAGGCTGGTGTCTTGTTCTGCTACCACTCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGCCAACCGGTCCCTGATGTGCGTAAACCTCTCCGACAATGAGCTCCTGGATGAGGGTGCCAAGTTGCTGTACACAACTTTGAGACACCCAAAGTGCTTCCTGCAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47596891 168 + 50890351 CAGGCTGGTGTCTTGTTCTGCTACCACTCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGCCAACCGGTCCCTGATGTGCGTAAACCTCTCCGACAATGAGCTCCTGGATGAGGGTGCCAAGTTGCTGTACACAACTTTGAGGCACCCAAAGTGCTTCCTGCAGAG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054717 168 - 122678785 CAGGTTGGTATCTTGTTCTGCCACCACTCAGCAATGGGCCCATCTCTCCTCCTCCCTCAAAATCAACCAGTCCCTGACATGCCTGAACCTCACAGCCAATGAGCTCCCAGATGAGAGTGCCAAGTTGCTGTGCACAACTCTGAGACACCCAAAATGCTTCCTGCAGAG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 3654788 1131 + 106955855 I a score=1199461.000000 s hg38.chr19_GL949747v2_alt 635388 486 + 729520 GTTGTCGTAAGTCTCTCC-TCTCTTAC--AGAGCAGCTGTGCTTTCG-ATCTGGGGCCACA----GACGAGCAAT-GGTCATGCCTGACTTGGCTG---------TATGGAACCTCTCGCTGATGTGAACACCTG-TTCCCATGTTTAGATCCAGGCCGATGGCCTGTGAATTTTGTTCTTCTCTCATTCCTATTCCTTCATAGGATCACCAGTGCATGATAGAAGGTGGGGAGTT--------------------------------CACAAGAAGGGGCTTTTGGATG------CTGGCACTTGTGGAGCTAGCCGGGAAGGTTGAA-GTTGGACCTGTC--AACCGTGTTGCCATT--TGTGATTCTTTTG--------TAGGTTGGAAAACTGTCACCTTACAGAAGCCAATTGCAAGGACCTTGCTGCTGTGTTGGTTGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAACCCCATTGGGAATACAGGGGTGAAGTTTCTGTGTGAGGGCTTGAGGTACCCCGAGTGTAAACTGCAGACCTTGGT s panTro4.chr19 59904041 485 + 63644993 GCTGTCGTAAGTCTCTCC-TCTCTTCC--AGAGCAGCTGTGCTTTCG-ATCTGGGGCCACA----GACGAGCAAT-GGTCATGCCTGACTTGGCTG---------TATGGAACCTCTCGCTGATGTGAACACCTG--TCCCATGTTTAGATCCAGGCCGATGGCCTGTGAATTTTATTCTTCTCTCATTCCTATTCCTTCATAGGATCACCAGTGCATGATAGAAGGTGGGGAGTT--------------------------------CACAAGAAGGGGCTTTTGGATG------CTGGCACTTGTGGAGCTAGCCGGGAAGGTTGAA-GTTGGAAATGTC--AACCGTGTTGCCATT--TGTGATTCTTTTG--------TAGGTTGGAAAACTGTCACCTTACAGAAGCCAATTGCAAGGACCTTGCTGCTGTCTTGGTTGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAACCCCATTGGGAATACAGGGGTGAAGTTTCTGTGTGAGGGCTTGAGGTACCCCGAGTGTAAACTGCAGACCTTGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833547 486 + 60714840 GTTGTCGTAAGTCTCTCG-TCTCTTCC--AGAGCAGCTGTGCTTTCG-ATCTGGGGCCACA----GACGAGCAGT-GGTCATGCCTGACTTGGCTG---------TATGGAACCTCTCGCTGATGTGAACACCTG-TTCCCATGTTTAGATCCAGGCCGATGGCCTGTGAATCTTGTTCTTCTCTCTTTCCTATTCCTTCATAGGATCACCAGTGCATGATAGAGGGTGGGGGGTT--------------------------------CACAAGAAGGGGCTTTTGGATG------CTGGCACTTGTGGAGCTAGCCGGGAAGGTTGAA-GTTGGAAATGTC--AACCGTGTTGCCATT--TGTGATTCTTCTG--------CAGGTTGGAAAACTGTCACCTTACAGAAGCCAATTGCAAGGACCTTGCTGCTGTCTTGGTTGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAACCCCATTGGGGATACAGGGGTGGAGTTGCTGTGTGAGGGCTTGAGGTACCCCGAGTGTAAACTGCAGACCTTGGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60644197 482 + 64156825 GTTGTCGTAAGTCCCTCCTTTTCTTCC--AGAGCAGCTGTGGTTTCG-GTCTGGGGCCATA----GACGGGGCGT-GGTCACGCCTGACTTGGCTG---------TTTGCAACCTCTCGCTGATGTGAACAGCTG-CTCCCATGTTTAGATCCAGGCCGATGGCTTGTGAATCTTG---TTCTCTCCTTCCTGTTCCTTCATAGGATCACCAGCGTGTGACAGAGGGTGGGGCGTT--------------------------------CACAAGAAGGGGCTTTCGGATG------CTGGCATT--TGGAGATAGCCGAGAAGGTTGAA-GTTGGAAATGTC--AACCATGTTGCCATT--TGTGATTCTTTTG--------CAGGTTGGAAAACTGTCACCTGACAGAAGCCAATTGCAAGGACCTTGCTGCTGTTTTGGTGGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAACTCCCTCAAGGATACAGGGGTGAAGTTTCTTTGTGAGGGCCTGAGCTACCCCGAGTGTAAACTGCAGGCCTTGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55785077 482 + 59248254 GTTGTCGTAAGTCTCTCCTTTTCTTCC--AGAGCAGCTGTGGTTTCG-GTCGGGGGCCATA----GACGGGGCGT-GGTCACGCCTGACTTGGCTG---------TTTGCAACCTCTCGCTGATGTGAACACCTG-CTCCCATGTTTAGATCCAGGCCGATGGCTTGTGAATCTTG---TTCTCTCCTTCCTGTTCCTTCATAGGATCACCAGCGTGTGACAGAGGGTGGGGCGTT--------------------------------CACAAGAAGGGGCTTTCGGATG------CTGGCATT--TGGAGATAGCCGAGAAGGTTGAA-GTTGGAAATGTC--AACCATGTTGCCATT--TGTGATTCTTTTG--------CAGGTTGGAAAACTGTCACCTGACAGAAGCCAATTGCAAGGACCTTGCTGCTGTTTTGGTGGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAACTCCCTCAAGGATACAGGGGTGAAGTTTCTGTGTGAGGGCCTGAGCTACCCCGAGTGTAAACTGCAGGCCTTGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47889073 482 + 51301725 GTTGTCGTaagtctctccttttcttcc--agaGCAGCTGTGGTTTCG-ATCTGGGGCCATA----GACGGGGCGT-GGTCACGCCTGACTTGGCTG---------TTTGGAACCTCTCGCTGATGTGAACACCTG-CTCCCATGTTTAGATCCAGGCCGATGGCTTGTGAATCTTG---TTCTCTCATGCCTGTTCCTTCATAGGATCACCAGCGTGTGACAGAGGGTGGGGCGTT--------------------------------CACAAGAAGGGGCTTTCGGATG------CTGGCATT--TGGAGATAGCCGAGAAGGTTGAA-GTTGGAAATGTC--AACCGTGTTGCCATT--TGTGATTCTTTTG--------CAGGTTGGAAAACTGTCACCTGACAGAAGCCAATTGCAAGGACCTTGCTGCTGTTTTGGTGGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAACTCCCTCAAGGATACAGGGGTGAAGTTTCTGTGTGAGGGCCTGAGCTACCCCGAGTGTAAACTGCAGGCCTTGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47597059 482 + 50890351 GTTGTCGTAAGTCTCTCCTTTTCTTCC--AGAGCAGCTGTGGTTTCG-ATCTGGGGCCATA----GACAGGGAGT-GGTCACGCCTGACTTGGCTG---------TTTGGAACCTCTCGCTGATGTGAACACCTG-TTCCCATGTTTAGATCCAGGCCGATGGCTTGTGAATCTTG---TTCTCTCATGCCTGTTCCTTCATAGGATCACCAGCGTGTGACAGAGGGTGGGGCGTT--------------------------------CACAAGAAGGGGCTTTCGGATG------CCGGCATT--TGGAGATAGCCGAGAGGGTTGAA-GTTGGAAATGTC--CACCGTGTTGCCATT--TGTGATTCTTTTG--------CAGGTTGGAAAACTGTCACCTGACAGAAGCCAATTGCAAGGACCTTGCTGCTGTTTTGGTGGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAATTCCCTCAAGGATACAGGGGTGAAGTTTCTGTGTGAGGGCCTGAGCTACCCCGAGTGTAAACTGCAGGCCTTGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 0 489 + 138250 GTTGTCGTAAGTGTCT---TCTCTT-C--AGAGCAGCTGTGGTTTCC-GTCTGGGGCGGTA----GATGAGAAAC-GGTCATGGCTGGCTTGGCTG---------TGTGGAGCCCCTCGCTGATAGGAACCCCTG-TTCCCATGTTGAGATCTGGACAGATGGCTTCTCAGTCTTGTTCTTCTCTCGTTCCTCCTCCTTCAGATGATCACCAGGGTGTGAGAGAGGGTGGGGAGTT--------------------------------CACGAGAA-GGGCTTTGGGATG------CTAGCGTT--TGGAGATGGCCGAGAAGGCTGAA-ATTGGAAATGTC-TCACCATGTTGCCATT--TGTGATTCTTTTGTTCTAACACAGGTTGGAAAACTGTCACCTTACAGAAGCTGATTGCAAGGACCTGGCTGCCGTTTTGGTTGTCAGCCGGGAGCTGATGCACCTGTGCTTGGCCGAAAACCCCCTCGGGGATACAGGGGTGAAGTTTCTGTGTGAGGGCTTGAGTTACCCCGAGTGTAAACTACAGACCCTGGT i calJac3.chr22_GL285922_random N 0 I 8 s canFam3.chr1 20054885 543 - 122678785 ACTGTCGTAAGTACTGCC-TCTCTCCCTGGGAGCATCTCTTTTCCTATGTTTGGGGCCACATAGGGAAGAGCAGTGGGTAAAATCTGGATTTGCTGGACTACCCATATGGGACCTCCTACTGATGTGGACACCTGGTTCCCATTTCTGGTCCCAGGTATGTGGCTCATGCATCTTATCATTCCCTCATCCTTCCTTCATGATTGAGTGTTAAGCACATGATGAGAgctatagagctatagatgctatagatgagctatagatgTTAAGCACAAGATGAGCCAT--AGATGGGGCCTCTGGCCTT--TAGGGACAGCCAAGAAAATTGGGTTTTGGAAATGTTCTCACCCTCTTACCATTTGTGTGGTGCTTTGG--------CAGGTTGGAAAACTGTCAACTTACAGAAGCCTGTTGCAAAGAGCTCTCTTCAGCTTTGATTGTCAACCAGAGGCTGACGCACCTGAGTTTGGCAAAGAACACTCTGGGAGATGATGGGGTAAAGCTTCTGTGTGAAGGCTTGAGTTACCCTGACTGTCAACTACAGATGCTGGT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 3654788 1131 + 106955855 I a score=146230.000000 s hg38.chr19_GL949747v2_alt 635874 86 + 729520 GTAAGTCCGTGCTGGCTGC----------------------------------------------------C--TGTGTGCGTGGGTGTATATGCACACGCCCCCCAC-------------CTCCGGGTTTGAGTAGGGTGGTTATGAGAACA s panTro4.chr19 59904526 86 + 63644993 GTAAGTCCGTGCTGGCTGC----------------------------------------------------C--TGTTTGCGTGGGTGTATATGCACACACCCCCCAC-------------CTCCGGGTTTGAGTAGGGTTGTTATGAGAACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834033 86 + 60714840 GTAAGTCCGTGCTGGCTGC----------------------------------------------------C--TGTGTGCGTGGGTGTATATGCACACACCCCCCAC-------------CTCCGGGTTTGAGTAGGGTGGTTATGAGAACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3655919 77 + 106955855 GTAAGTCCCtgttgggggt----------------------------------------------------g--tgtgtgtgtgtgtgtatgtgtgtgCAC----------------------GTGAATTCAAGCAGGAGAGAGATGAAAGTA i nomLeu3.chr10 I 1131 C 0 s rheMac3.chr19 60644679 125 + 64156825 GTAAGTCTGCACTGGCtgc------------gtgtgtgtgtgtgtgtgtgtgtgtgtacatagctggctgcc--tgtgtgtgtgtgtgtatgtACATA-GCCCCCCAC-------------CTCTGGGTTCTAGTAGGGTGGTTATGAGAACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55785559 139 + 59248254 GTAAGTCTGCACTGGCTGCgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtACATAGCTGGCTGCCtgtgtgtgtgtgtgtgtatgtACATA-GCCCCCCAC-------------CTCTGGGTTCTGGTAGGGTGGTTATGAGAACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47889555 83 + 51301725 GTAAGTCTGTGCTGGctgc----------------------------------------------------c----tgagtgtgtgtgtgtgtacata-gtcCCCCAC-------------CTCCAGGTTCTAGTAGGGTGGTTATGAGAACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47597541 83 + 50890351 GTAAGTCCGTGCTGGCTGC----------------------------------------------------C----TGTGTGTGTGTGTATGTACATA-GCTCCCCAC-------------CTCCGGGTTCTAGTAGGGTGGTTATGAGAACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 497 96 + 138250 CCAAGTCCCTGCTGACTGC----------------------------------------------------C--TGTGTGCGTGGATGTATATGCATA---CCCCCATGCGCACACACACACGCTGGGTTCGAGTACGGTGTTTATAAGAATA i calJac3.chr22_GL285922_random I 8 I 317 s canFam3.chr1 20055428 64 - 122678785 GTAAGTCCATGCTAGTTAT----------------------------------------------------T----------TGTGTGCATGTGCATA-------------------------CTGGATTCAAGTAGCACAGATGCAAGCA-- i canFam3.chr1 C 0 C 0 a score=38330.000000 s hg38.chr19_GL949747v2_alt 635960 16 + 729520 C---TTAAT---TCCTCTAAAA s panTro4.chr19 59904612 16 + 63644993 C---TTAAT---TCCTCTAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834119 16 + 60714840 C---TTAAT---TCCTCTAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3655996 19 + 106955855 CTTGTTAAT---TCATTTCAAA i nomLeu3.chr10 C 0 n 0 s rheMac3.chr19 60644804 16 + 64156825 C---TTAAT---TCCTCTAAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55785698 16 + 59248254 C---TTAAT---TCCTCTAAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47889638 16 + 51301725 C---TTAAT---TCCTCTAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47597624 16 + 50890351 C---TTAAT---TCCTCTACAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 910 16 + 138250 C---TTAAT---TTCTCTCAAT i calJac3.chr22_GL285922_random I 317 C 0 s canFam3.chr1 20055492 19 - 122678785 ---TTTAATAGCTTCTCTGAAT i canFam3.chr1 C 0 C 0 a score=67997.000000 s hg38.chr19_GL949747v2_alt 635976 31 + 729520 GTTCCAAGCATGATGCTAATG---ACAACTGGTA s panTro4.chr19 59904628 31 + 63644993 GTTCCAAGCATGATGCTAATG---ACAACTGGTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834135 31 + 60714840 GCCCCAAGCATGATGCTAATG---ACAACTGGTA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60644820 34 + 64156825 GCCCCAAGCATGATGCTAATGGTTACAACTGGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55785714 34 + 59248254 GCCCCAAGCATGATGCTAATGGTTACAACTGGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47889654 34 + 51301725 GCCCCAAGCATGATGCTAATGGTTACAACTGGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47597640 31 + 50890351 GCCCCAAGCATGATGCTAATGGTtagtagta--- i chlSab2.chr6 C 0 I 17 s calJac3.chr22_GL285922_random 926 34 + 138250 GCTCCAAGCATGATGCTAATGTTTATAACTGGTG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20055511 30 - 122678785 ACCCCAAGTATGATACTGAC----AGATCTGATG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 3656015 0 + 106955855 I a score=58567.000000 s hg38.chr19_GL949747v2_alt 636007 28 + 729520 AGACCTGGGTAGATGATGGTAGGAAAAA s panTro4.chr19 59904659 28 + 63644993 AGACCTGGGGAGATGATGGTAGGAAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834166 28 + 60714840 AGACCTGGGGCGATGATGATAGGAAAAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60644854 28 + 64156825 AGATCTGGGGAGATGGTGATAGGAAAAA i rheMac3.chr19 C 0 I 19 s macFas5.chr19 55785748 28 + 59248254 AGATCTGGGGAGATGGTGATAGGAAAAA i macFas5.chr19 C 0 I 37 s papAnu2.chr19 47889688 28 + 51301725 AGATCTGGGGAGATGGTGATAGGaaaaa i papAnu2.chr19 C 0 I 7 s calJac3.chr22_GL285922_random 960 28 + 138250 AGACCTGGGGAGACGATGATAGGAAAAA i calJac3.chr22_GL285922_random C 0 I 6 s canFam3.chr1 20055541 28 - 122678785 AGACCTGGCAAGAGGATGTTAAAAAAAA i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 3656015 0 + 106955855 I e chlSab2.chr6 47597671 17 + 50890351 I a score=112972.000000 s hg38.chr19_GL949747v2_alt 636035 72 + 729520 agtataagtagtagtaga-gt-----------------------------agtagtaataTTCTATAGGGATTTGGGGAATGTAGCTGGTTTTCGGG---------TTTTT s panTro4.chr19 59904687 65 + 63644993 AGTATAAGTAGT-----A-GT-----------------------------AGTAGTAAT-TTCTATAGGGATTTGGACAATGTAGCTAGTTTTCAGG----------GTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834194 76 + 60714840 AGTATAAGTAGT-----A-GT-----------------------------AGCAGTAATATTCTATAGGGATTTGGAGAATGTAGCTGGTTTTCAGGGTTCtttttttttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60644901 70 + 64156825 agtagtagtagt-----a-gt-----------------------------agtagtaataTTCTATAGGGATTTGGAGAATGTAGCTGGTTTTCAGG------GTTTTTTT i rheMac3.chr19 I 19 C 0 s macFas5.chr19 55785813 70 + 59248254 agtagtagtagt-----a-gt-----------------------------agtagtaATATTCTATAGGGATTTGGAGAATGTAGCTGGTTTTCAGG------GGTTTTTT i macFas5.chr19 I 37 C 0 s papAnu2.chr19 47889723 70 + 51301725 agtagtagtagt-----a-gt-----------------------------agtagtaatatcCTATAGGGATTTGGAGAACGTAGCTGGTtttcagg------ggtttttt i papAnu2.chr19 I 7 C 0 s chlSab2.chr6 47597688 48 + 50890351 agtagtagtagt-----a-gt-----------------------------agtagtaATATTCTATAGGGATTT----------------------G------GTTTTTTT i chlSab2.chr6 I 17 C 0 s calJac3.chr22_GL285922_random 994 87 + 138250 AGAAGTAGTAGT-----A-GTATAAAAAAAGAAGAAAATGAAAATAAAAAAGTAGTAATATTCTGTAGGGATTTGGAGGATGTAGCTG--------G----------tttt i calJac3.chr22_GL285922_random I 6 C 0 s canFam3.chr1 20055569 66 - 122678785 --AAAAAGCAAG-----ACAT-----------------------------AGTGTCAATATTCCATAGGAATTTGGGGGATGTAGCTGATTTCCAGG------GTTTT--- i canFam3.chr1 C 0 I 1311 e nomLeu3.chr10 3656015 0 + 106955855 I a score=441966.000000 s hg38.chr19_GL949747v2_alt 636107 234 + 729520 TTTTTCC----------------------------------------TCTTTATGTATGTATGTAttttagagatgggatctcgccgtgttgcctaggctggtctcaaactcctgagctcaagagatctgcctgccttggcctcccaaagtgctagaattacaggcatgagccatgtcaccccatgctG-TGTTTTCTCTTAATCTGTGTTCTTAGAACTATAAC--TGTAACATAAATTGCATGCAA-TTGGTTGTAAATGGAATTCATTTACTTAT-------- s panTro4.chr19 59904752 234 + 63644993 TTTTTCC----------------------------------------TCTTTATGTAtgtatgtattttagagatggggtctcaccatgttgcctaggctggtctcaaactcctgagctcaagagatctgcctgccttggtctcccaaagtgctagaattacaggcatgagccaTGTCACCCCATGCTG-TGTTTTCTCTTAATCTGTGTTCTTAGAACTATAAC--TGTAACATAAATTGCATGCAA-TTGGTTGTAAATGGAATTCATTTACTTAT-------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834270 199 + 60714840 tttttcc----------------------------------------tctttatgtatgtatgtattttagagatggggtctcgccatattgcctaggctggtctcaaactcctgagctcaagagatctgcctgccttggcctcccaaaatgctagaattacaggcatgagccaTGTCACTCCATGCTG-TGTTTTCTCTTAATCTGTGTTCTTAGAACTATAAC--TGTAACATAAATTGC-------------------------------------------- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60644971 272 + 64156825 TTTTTCCATTTGGAGAATGTAGCTGGTTTTCAG--GGGGTTTTTTTTTTCCTCTTTATGCATGTAttttagagatggggtctcgctatgttgcccaggctggtcttaaactcccgagcgcaagaggtctgcctgccttggcctcctaaagtgctaggattacaggcatgagccatctcgcccCACGCTG-TGTTTTCTCTTAATCTGTGTTCTTAGACCTATCATTGTGTAACATAAATTGCATGCAA-TTGGTTGTAAATGGAATTCATTTATTT---------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55785883 234 + 59248254 TTTTTTC----------------------------------------CTCCTCTTTATGCATGTAttttagagatggggtctcgctatgttgcccaggctggtctcaaactcccgagcgcaagaggtctgcctgccttggcctcccaaagtgctaggattacaggcatgagccatctcgcccCACGCTG-TGTTTTCTCTTAATCTGTGTTCTTAGACCTATCATTGTGTAACATAAATTGCATGCAA-TTGGTTGTAAATGGAATTCATTTATTT---------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47889793 235 + 51301725 ttttttt----------------------------------------ctcctctttatgcatgttttttagagatggggtctcgctctgttgcctaggctggtctcaaactcccgagcgcaagaggtctgcctgccttggcctcccaaagtgctaggattacaggcgtgagccatctcgCCCCATGCTG-TGTTTTCTCTTAATCTGTGTTCTTAGACCTCTAATTGTGTAACATAAATTGCATGCAGTTTGGTTGTAAatggaattcatttattt---------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47597736 271 + 50890351 TTTTTTCCTCCTCTTTATGCATGTATTTTAGAGATGGGGTCTCG---CTCCTCTTTATGCATGTAttttagaggtggggtctcgctctgttgtctaggctggtttcaaactcctgagcgcaagagatctgcctgccttggcctcccaaagtgctaggattacaggcatgagccatctcgcccCACGCTG-TGTTTTCTCTTAATCTGTGTTCTTAGACCTATAGTTGTGTAACATAAATTGCATGCAA-TTGGTTGTAAATGGAATTCATTTATTT---------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 1081 243 + 138250 ctttttc----------------------------------------tctttttttatgtatatattttagacgtggggtcttaccatgttgcctaggctggtctcaaactcctgagctcaagccatctgcccatcttggcctcccaaaatgctgggattacaggcctgagccatcgcacccCACCTTGTTTTTTTCTCTTAATCTGTGTTCTTAGAACTATAGCTGTATAACGCAAATCACAGGTAA-TTGGTTGTAGATGGAAGCTATTTTCTT--TCTCttat i calJac3.chr22_GL285922_random C 0 I 314 e canFam3.chr1 20055635 1311 - 122678785 I e nomLeu3.chr10 3656015 0 + 106955855 I a score=71079.000000 s hg38.chr19_GL949747v2_alt 636341 45 + 729520 TTTTTAATGAATGATTTGCAAATCAGGTAGTCTTCTGGGCCAGTG s panTro4.chr19 59904986 45 + 63644993 TTTTTaatgaatgatttgcaaatcaggtagtcttctgggccagtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834469 24 + 60714840 ---------------------ATCAGGTAGTCTTCTGGGCCAGTG i ponAbe2.chr19 C 0 I 3879 s rheMac3.chr19 60645243 36 + 64156825 ---------aatgatttgcaaatcaggtagtcttctgggccatcg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55786117 36 + 59248254 ---------aatgatttgcaaatcaggtagtcttctgggccatcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47890028 36 + 51301725 ---------aatgatttgcAAATCAGGTAGTCTTCTGGGCCATCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47598007 36 + 50890351 ---------aatgatttgcaaatcaggtagtcttctgggccatcg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 1638 45 + 138250 TTTTTaatgaacgatttgcaaatcacgcagcctcctgagccagtg i calJac3.chr22_GL285922_random I 314 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e nomLeu3.chr10 3656015 0 + 106955855 I a score=230024.000000 s hg38.chr19_GL949747v2_alt 636386 134 + 729520 TACGCTCAGACTCCCAATGGAAGCTATTGGAAGCTACATGCTCAATGTGATCCTCCTTTTAATACTAAAATCACAGGACACGTggcctggcatagtggctcacgcctataatcccatcaccttgggaggccgaa s panTro4.chr19 59905031 134 + 63644993 tacgctcagactccCAATGGAAGCTATTGGAAGCTACATGCTCAATGTGATCCTCCTGTTAATACTAAAATCACAGGACACGTggcctggcacagtggctcacgcctataatcccagcactttgggaggccaaa i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60645279 134 + 64156825 taggctcagactccCGACGGAAGCTATTGGAAGCTACATGCTCAATATGATCTTCCTGTCAATACTAAAATCACAGGACAGGTggcctggcacagtggctcacgcctgtaatcccagcactttgggaggctgaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55786153 134 + 59248254 taggctcagaCTCCCGACGGAAGCTATTGGAAGCTACATGCTCAATATGATCTTCCTGTCAATACTAAAATCACAGGACAGGTggcctggcacagtggctcacgcctgtaatcccagcactttgggaggctgaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47890064 134 + 51301725 TAGGCTCAGACTCCCAGTGGAAGCTATTGGAAGCTACATGCTCAATATGATCTTCCTGTTAATACTTAAATCACAGGACAggtggcctggcacagtggctcacgcctgtaatcccagcaccttgggaggccgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47598043 134 + 50890351 taggctcagaCTCCCAATGGAAGCTATTGGAAGCTACATGCTCAATATGATCTTCCTGTTAATACTAAAATCACAGGACAGGTggcctggcacagtggctcacacctgtaatcccagcaccttgggaggccgag i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 1683 132 + 138250 taggct--GACTCTCTGGGGAAGCTATTGGAAGCTACACGCTCAATATAATCCTCCCGTTAATACTAAAATCATAGGATGGGTAgccgggtgcagtggctcacgcctgtaatcccagcactttgggaggccgag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I a score=-1300.000000 s hg38.chr19_GL949747v2_alt 636520 3 + 729520 gc-a s panTro4.chr19 59905165 2 + 63644993 gc-- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60645413 3 + 64156825 gca- i rheMac3.chr19 C 0 I 639 s papAnu2.chr19 47890198 2 + 51301725 gc-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47598177 2 + 50890351 gc-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 1815 2 + 138250 gc-- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C a score=119109.000000 s hg38.chr19_GL949747v2_alt 636523 154 + 729520 aggcagatcccttgagggcaggagttcaagaccagcctgcccaacatggtgaaacattgtctctctactaaaaatacaaaaattagtcacgcatggtgggacatgcctgtaatcccagttactcaggaggctaaggcaggagaatcacttgaac s panTro4.chr19 59905167 154 + 63644993 aggcagatcccttgagggcaggagttcgagaccagcctgcccaacatggtgaaacattgtttctctactaaaaatacaaaaattagtcaggcatggtgggacatgcctgtaatcccagttactgagaaggctaaggcaggagaatcacttgaac i panTro4.chr19 C 0 I 891 s papAnu2.chr19 47890200 154 + 51301725 aggaagatcccttgaggccaggagttcaagaccagcctggccaatatggtgaaacatcgtctctctactaaaaatacaaaaattagctggggatggtgggatatgcctgtaatcccagttactcaggaggctaaggcaggagaatcacttgaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47598179 154 + 50890351 aggaagatcccttgaggccaggagttcaagaccagcctggccaatatggtgaaacatcgtctctctactaaaaatacgaaaattagctggggatggtgggacatgcctgtaatcccagttactcaggaggctaaggcaggagaatcacttgaac i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 1817 152 + 138250 gggcagatcccttaagggcagaagttcaagaccagcctggccaacacagtgaaacccca--tctctactaaaaattaaaaaattagccaggcggggtgatatatgtctgtaatcccagttactcagaaagctgagtcaggagaatcacttgaac i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=109358.000000 s hg38.chr19_GL949747v2_alt 636677 266 + 729520 ttcggaggtggaggttgcagtgagctgagatggcaccactgaagtccagtctggccaatagagca--agactctctc-aaaaaaaaaaaaTTATAGGACAAATCTTTAGAAAGGAATTGGggcctggcatggtggctcatgcctgtaatctcagcactttaggaggc------gggcagaacacctgaggtcaggagtttgagaccagcctggctgatgcagtgaaaccctgtctctactaaaaatacaaaaattagctaggcgtggtggtatgg s papAnu2.chr19 47890354 270 + 51301725 ctgggaggtggaggttgcagtgagctgagattgcaccacttctgtacagtctgggcaatagaacaagacacTCTCTC----CAAGAAAAATTATAGGACACGTCTTTAGAAAGGAATTGAGttctggcgcggtggctcacgcctgtagtctcagcactttgggaggccgaggtgggcagatcacctgaggtcaggagcttgagaccagcccgaccaacgtggtgaaaccctgtctctactaaaaatacaaaaattagccaggcgt-gtggtgTGG i papAnu2.chr19 C 0 M 377 s chlSab2.chr6 47598333 265 + 50890351 ctgggaggtggaggttgcagtgagctgagattgtaccacttctctacagtctgggcaataga-----acactctctc----caagaaaaaTTACAGGACACATCTTTAGAAAGGAATTGAGTTCTggcacggtggctcatgcctgtagtctcagcactttgggaggccggggtgggcagatcacctgaggtcaggagcttgagaccaacccggccaacgtggtgaaaccctgtctctactaaaaatacaaaaattagccaggcgt-gtggtgtgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 1969 273 + 138250 tcggaaggcagacgttgcagtgagctgagactgcaccactgcagtccagtctgggaaatagagta--agactgtttaaaaaaaaaaaaaaTTACGGGACGAATCTTTAGAAAGGAATTAGggctgggcactgtggctcacgcctgtaatctcagcactttcagaggccaaggcgggcaggtcacctgaggtcaggagtttgagaccagcctggccaatattgtgaaaccccgtctctactgaaaatacaaaaattagctgggcatggtggtgcgt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I e panTro4.chr19 59905321 891 + 63644993 I a score=31368.000000 s hg38.chr19_GL949747v2_alt 636943 166 + 729520 tcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaagtcgggagg------ttgcagtgagccgagatcgtgccagcctgggtgacagaacgagattgtctcaaaa----------aaaaaaaaaaaTTGTATCTGCACTGATGGTTTCTGTTCAGAGATTCGATTTTA s chlSab2.chr6 47598598 180 + 50890351 tcctgtaatcccagctacttgggaggctgaagcaggagaatcacttgaagccaggaggcagagcttgcagggagccaagatcgtgccagcctgggcaacagaacgagattgtctcaaaaaataaaaaataaaaaataaaaTTG--TCTGCACTGATGGTTTCCGTTCAGAGATTCGATTTTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2242 166 + 138250 gcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggagc-agaggttacagtgagccgagatggc----acctgggtgacagaacaagactgtctcaaaaaacaaaaca-aaacaaaaaaaCTGTGTCTGCACTGATGGTTTCTGTTCAGAGA---------- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I e papAnu2.chr19 47890624 377 + 51301725 M e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I e panTro4.chr19 59905321 891 + 63644993 I a score=23234.000000 s hg38.chr19_GL949747v2_alt 637109 87 + 729520 TGTTAACATCTCTGGTAttttttttttt----tttttttaag-atg--------gagttttactc---ttgcccacgctgg----caatggcatgatctaggctcac s papAnu2.chr19 47891002 98 + 51301725 TGTTAACatctctggtattttttttttttttctttttttaagtatg--------gagtcttgctc-tgttgcccaggctggagtacaatggcgtgatcttggctcat i papAnu2.chr19 M 377 C 0 s chlSab2.chr6 47598778 91 + 50890351 TGTAAACATCTCTGGTAttttttttt------cttttttaag-atg--------gagtctagctc-tgttgcccaggctggagtgcaatggcgtgatcttggctcct i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2408 84 + 138250 ------------------Ctttttttct----cttttttgag-acggagcttcagagtttcgctcttgttgcccagcctggagtgcagaggcacaatctcggctgag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I e panTro4.chr19 59905321 891 + 63644993 I a score=11630.000000 s hg38.chr19_GL949747v2_alt 637196 27 + 729520 tgcaacctccggct-tcaaggaggttga s panTro4.chr19 59906212 27 + 63644993 tgcaacctccggct-tcaaggaggttga i panTro4.chr19 I 891 C 0 s papAnu2.chr19 47891100 22 + 51301725 tgcaacttccggct-tcaag-----cga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47598869 22 + 50890351 tgcaacttccggct-tcaag-----cga i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2492 28 + 138250 cacaacctctgcctctctgggaggtgga i calJac3.chr22_GL285922_random C 0 I 59 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=216936.000000 s hg38.chr19_GL949747v2_alt 637223 483 + 729520 ttctcctgcctcagcctcctgagtagctgggattacaggcactcaccaccacgccgggctaatttttatatttttagtagagatgggatttcaccatgttggccaggttggtctcgaact---gacctcatgatccgcccgcctcagccttccaaagtgctaggatttacaggcatgagccactgcgtccagccAT--ACATATCTCTGGTATTCTTTGTCTCTAACATCACCTCCAACAGTTAGGAACTGTCCTCTTCCTATGAAGTAAC--TAATCTAGGATATGTACCTGGCATCTGAAAACTACCCACTTAAATTTAATGACATATTCAGTTCATGGCTGGAGACGATGAGTAGAAGGAAAGGATTCTTCCCACACCCACTATATCTAGGCCCTGAAACATTAAAAAAGAAGTCCCACAAGCAGTGAGATGTCACCGACTCACTAACTGTATCTTCAAATGAATGTCTAGTTTTTTTGGTtgtgtg s panTro4.chr19 59906239 485 + 63644993 ttctcctgcctcagcctcccgagtagctgggattacaggcactcaccaccacgccgggctaatttttgtgtttttagtagaaactggatttcaccatgttggccaggctggtctcgaactcctgacctcatgatccgcccgcctcagccttccaaagtgctgggatt-acaggcatgagccactgcgcccagccAT--ACATATCTCTGGTATTCTTTGTCTCTAACATCACCTCCAACAGTTAGGAACTGTCCTCTTCCTATGAAGTAAC--TAATCTAGGATATGTACCTGGCATCTGAAAACTACCCACTTAAATTTAATGACATATTCAGTTCATGGCTGGAGACGATGAGTAGAAGGAAAGGATTCTTCCCACACCCACTATATCTAGGCCCTGAAACACTAAAAAAGAAGTCCCACAAGCAGTGAGATGTCACCCACTCACTAACTGTATCTTCAAATGAATGTCTAGTTTTTTTGGTTGTGTG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47891122 462 + 51301725 ttctcctgcctcagcctcctgagtagctgggactacaggcgc---ccaccacgtctggataatttttgtatttttagtagagatggg-tttcaccacgttggccaggctggtctcgaactcttgacctcgtgatctgcccacctcagtcttccaaagtgctgggatt-acaggaatgagccaccgcgcctggcc----atacaTCTCTGGTATTCTTTGTTTCTAACATCACCTCCAACAGTTGGGAACTGTCATCTTCCTATAAAGTAGCTTTAATCTAGGATATGCACCTGGCATCTGAAAACTA-CCAC-----TTTAATGACATACTCAGTTCGTGGCTGGA---GATGGGTAGAAG----GGATTCTTCCTACACCCACTATATTTAGGCCCTGAAACACTAAAACCGAAGTCCCACAGGCAGTGAGATGTCACTCACTTGC------CATCTTCAAATTAATGTCTAGTTTTCTTGGttttgtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47598891 470 + 50890351 ttctcctgcctcagcctcctgagtagctgggactacaggcacccaccaccacatctggctaatttttgtatttttagtagagatggg-tttcaccacgttggccaggctggtctcgaactcttgacctcatgatctgcccacctcagtcttccaaagtgctggaatt-acaggcatgagccaccgcacctggccATGTATACATCTCTGGTATTCTTTGTCTCTAACATCACCTCCAACAGTTGGGAACTGTCATCTTCCTATAAAGTAGCTTTAATGTAGGGTATGCACCTGGCATCTGAAAACTACCCAC-----TTTAATGACATACTGAGTTCGTGGCTGGA---GATGGGTAGAAG----GGATTCTTCCTACACCCACTATATTTAGGCCCTGAAACACTAAAACCGAAGTCCCACAGGCAGTGAGATGTCACTCACTTGC------TATCTTCAAATTAATGTCTAGTTTTCTTGGTTTTGTG i chlSab2.chr6 C 0 I 349 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=6355.000000 s hg38.chr19_GL949747v2_alt 637706 82 + 729520 tgtgtgtggtgtgtggtgtgtgtgGTATTTTTTTGGGGGGGGGGGGGTTTTCttttttttttttttttggtttttttttttt s panTro4.chr19 59906724 73 + 63644993 TG------GTGTGTGGTGTGTGTGGTATTTTTTTGGGGGGGGGG---TTTTCtttttttttttttttggttttttttttttt i panTro4.chr19 C 0 I 2 s papAnu2.chr19 47891584 48 + 51301725 ---------tatgc-atgtgtgtggt-tttttttgt-----------ttttgttttgtttttttttttga------------ i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e nomLeu3.chr10 3656015 0 + 106955855 I e chlSab2.chr6 47599361 349 + 50890351 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=600.000000 s hg38.chr19_GL949747v2_alt 637788 1 + 729520 g s panTro4.chr19 59906799 1 + 63644993 g i panTro4.chr19 I 2 C 0 s papAnu2.chr19 47891632 1 + 51301725 g i papAnu2.chr19 C 0 I 305 s chlSab2.chr6 47599710 1 + 50890351 g i chlSab2.chr6 I 349 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=119847.000000 s hg38.chr19_GL949747v2_alt 637789 239 + 729520 atagtcttgctctgtcgcccaggctggaatgcagtggctccatctcagctcactgcaacctccacctcctgagttcaggtgtgattctcctgcctcagcctcccagggattaaggtgcatgccaccacgcccagctaacttctttatttttagtagagacgagttttcaccatgttggtcaagctggtctcgaattcctgacctcaggtgatccacccacctcagcctcccaaagtgct s panTro4.chr19 59906800 237 + 63644993 atagtcttgctctgtcacccaggctggaatgcagtggctccatctcagctcactgcaacctccacctcctgagttcaggcg--attctcctgcctcagcctcccaggaattaaggtgcatgccaccacgcccagctaacttctgtatttttaggagagacgagttttcaccatgttggtcaagctggtctcgaattcctgacctcaggtgatccacccacctcagcctcccaaagtgct i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47891938 237 + 51301725 aTAGTCTTGCTcagtcgtccaggctagagtgcagtggtgccatctcagctcactgcaacctccgcctcctgagttcaagcg--attctcctgcctcagcctcccagggattaaggtgcacaccaccacgcctagctaacttctgtgtttttagtagagacgaagtttcaccacgttggtcaggctggtctcgaactgctgacctcaggtgatccgcccacctcagcctcccacagtgct i papAnu2.chr19 I 305 C 0 s chlSab2.chr6 47599711 237 + 50890351 atagtcttactcagtcatccaggctggagtgcagtggtgccatctcagctcactgcaacctccgcctcctgagttcaagcg--attctcctgcctcagcctcccagggattaaggtgcacgccaccacacccagctaacttctgtgtttttagtagagacgaagtttcaccacattggtcaggctggtctcgaactgctgacctcaggtgatccgcccacctcagcctcccacagtgct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=136297.000000 s hg38.chr19_GL949747v2_alt 638028 164 + 729520 gggattacaggtgtgagccaccgtgccggccCCCTCAATTCAACTTTTTGATCCATGCCCCTATTTTGCTAAGTTGTCAACTTCCCTTTAGTCTTATGTGGGTTTTCCTCCATT--ACAGTCATGGAAGTTTCTAGAAGGCCGGGTAGGGT-----------------------ctttgagaggccgag s panTro4.chr19 59907037 164 + 63644993 gggattacaggtgtgagccaccgtgccggccCCCTCAATTCAACTTTTTGATCCATGCCCCTATTTTGCTAAGTTGTCAACTTCCCTTTAGTCTTATGTGGGTTTTCCTCCATT--ACAGTCATGGAAGTTTCTAGAAGGCCGGGTAGGGT-----------------------ctttgagaggccgag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103348417 166 - 106955855 GGGATTACAGGTGTGAGCCACCGTGCCAGCCCCCTCAATTCAACTTTTTGATCCATGCCCCTATTTTGCTAAGTTGTCAACTTCCCTTTAGTCTTATGTGGGTTTTCCTCCATTACACAGTCAGGGAAGTTTCTAGAAGGCCAGTTATGGT-----------------------ctttgggaggccgag i nomLeu3.chr10 M 3096 C 0 s papAnu2.chr19 47892175 189 + 51301725 gggattacaggcgtgagccattgtgccggTCCCCTCAATTCAACTTTTTGATCCATGCCCCTATTTTGCTAAGTTGTCAACTTCTCTTTAGTCTTATGTGGGTTTTCCTCCATCACACAGTCATGGAAGTTTCTAGAAGactaggtacggtggctcacgcctgtaatcccagcactttgggaggctgaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47599948 189 + 50890351 gggattacaggcgtgagccatcgtgcTGGTCCCCTCAATTGAACTTTTTGATCCATGCCCCTATTTTGCTAAGTTGTCAACTTCCCTTTAGTCTTATGTGGGTTTTCCTCCATCACACAGTCATGGAAGTTTCTAGAAggctaggtacggtggctcacgcctgtaatcccagcactttgggaggctgaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=298201.000000 s hg38.chr19_GL949747v2_alt 638192 261 + 729520 gcaggtggatcatgaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtctttactaaaaatacaaaaattagccaggcgtggtgtcgga-gcctgtaatcccagcttacttgggagggtgaggcagagaattgcttgaacctgggaggcggaagttgcagtgagctgagattgtgccactgtactccagcctgggtgtcagagcgaga--ctgtctcaaaaaaaaaaaaaaaa------------aaGTTTCTATACATTCATA s panTro4.chr19 59907201 259 + 63644993 gcaggtggatcatgaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtctttactaaaaatacaaaaattagccaggcgtggtgtcgga-gcctgtaatcccagcttacttgggagggtgaggcagagaattgcttgaacctgggaggcggaggttgcagtgagctgagattgtgccactgtactccagcctgggtgtcagagcgaga--ctgtctcaaaaaaaaaaaaaaaa--------------GTTTCTATACATTCATA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103348583 276 - 106955855 gcaggtggatcatgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctttactaaaaatacaaaaattagccatgcatggtgtcagatgcctgtaatcccagcttacttgggagggtgaggcagagaattgcttgaacccgggaggtggaggttgcagtgagccgagattgtgccactgtactccagcctgggcgtcagagcgagactctgcctcaaaaaaaaaaaaaaaaaaaaaaaaaaGGAAGTTTCTATACATTCATA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55786287 252 + 59248254 gcagatggatcataaggtcaggagttcaagaccagcctggctaatac-gtgaaaccccatctttactaaaaatac-aaaattagccaggcgcggtgtcggatgtctgtaatcccagc-tacttaggagggtgaggcagagaattgcttgaacccaggaggcggaggttgcagtgagccgagactgtgctcctgtactccaacctgggcgtcagagcaaga--ctgtctca-----gaaaaaaaaa--------------GTTTCTGTACATTCACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47892364 251 + 51301725 gcaggtggatcatgaggtcaggagttcaagaccagcctggctaatac-gtgaaatcccatctttactaaaaatac-aaaattagccaggcgtgatgtcggatgtctgtaatcccagc-tgcttgggagggtgaggcagagaattgcttgaacccaggaggcggaggttgcagtgagccaagactgtgctcCTGTACTCCAACCCGGGCGTCAGAGCGAga--ttgtctca------aagaaaaaa--------------gtttctgtACATTCACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47600137 252 + 50890351 gcaggtggatcatgaggtcaggagttcaagaccagcctggctaatac-gtgaaaccccatctttactaaaaatac-aaaattagccaggcgtggtgtcagatgtctgtaatcccagc-tacttgggagggtgaggcagagaattgcttgaacccaggaggcggaggtcgcagtgagccaagactgtgctcctgtactccaacctgggcgtcagagcgaga--ctgtctca-----gaaaaaagaa--------------GTTTCTGTACATTCACA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e rheMac3.chr19 60645416 639 + 64156825 I a score=781045.000000 s hg38.chr19_GL949747v2_alt 638453 494 + 729520 AAGTTTCAAGATTTGGGGGTGTGTTTTCACTTCTCCATCGTCATGGACTCCAATCTGCCATCTATTTCCAAGGCCCTTCCAGGTCCTGTGTCCCTCAGCTAGTGGTATGCTTCACTTGGGACCCAGAGATACATGGGCATTATAGTTCAAATTATAATTAAGT-TTAGAACTCTATTGAGACAGAAGAAAGAAAACAGAGC-TAAGGTGAAATATCTCTGATAATCTGTGTTGGTTAATATCTAGGATCCTAGTACCAGAT-ATGTTGGAGTGTGAGCTGGTGTCTTCTGCCTGTAAGACACTACCTCTCTAGCAACTGAATTTAGCAAATACAATCgtaatcccagcatgttagggaggccagggtgggcagatcatctgaggtcgggagttcaagaccagcctggccaacatggggaaaccctgtctctactaaaaatacaaaacttagctgggtgtggtggcacgcgca----------------------------------tgtgtgtacacacacac----acccccct s panTro4.chr19 59907460 492 + 63644993 AAGTTTCAAGATTTGGGGGTGTGTTTTCACTCCTCCATCGTCATGGACTCCAATCTGCCATCTATTTCCAAGGCCCTTCCAGGTCCTGTGTCCCTCAGCTAGTGGTATGCTTCACTTGGGACCCAGAGATACATGGGCATTATAGTTCAAATTATAATTAAGT-TTAGAACTCTATTGAGACAGAAGAAAGAAAACAGAGC-TAAGGTGAAATATCTCTGATAATCTGTGTTGGTTAATATCTGGGATCCTAGTACCAGAT-ATGTTGGAGTGTGAGCTGGTGTCTTCTGCCTGAAAGACACTACCTCTCTAGCAACTGAATTTAGCAAATACAATCgtaatcccagcacgttagggaggccagggtgggcagatcgtctgaggtcgggagttcaagaccagcctcgccaacatggggaaaccctgtctctactaaaaatacaaaacttagctgggtgtggtggcacgcgca----------------------------------tgcgtgtacacacacac------ccccct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56838372 478 + 60714840 AAGTTTCAAGATTTGGGGGTGTGTTTTCACTCCTCTGTCGTCATGGGCTCCAATCTGCCATCTATTTCCAAGGCCCTTCCAGGTCCTGTGTCCCTCAGCTAGTGGTATGCTTCACTTGGGACCCAGAGATACATGGGCATTATAGTTCAAATTATAATTAAGT-TTAGAACTCTATTGAGACAGAAGAAAGA------AGC-TAAGGTGAA--------------CTGTGTTGGTTAATATCTAGGATCCTAGTAGCAGAT-ATGTTGGAGTGTGAGCTGGTGTCTTCTGCCTGTAAGACACCACCTCTCTAGCAACTGAATTTAGGAAACAGAATCgtaatcccagcacgttagggaggccagggtgagcagatcgtctgaggtcgggagttgaagaccaacctggccaacatggggaaaccctgtctctactaaaaatacaaaacttagctgggtgtggtggcatgcgaa----------------------------------cgcgtgtacacacacacacacacacccct i ponAbe2.chr19 I 3879 C 0 s nomLeu3.chr10 103348859 496 - 106955855 AAGTTTCAAGATTTAGGGGTGTGTTTTCACTCCTCCGTCATCATGGGCTCCAATCTGCCATCTATTTCCAAGGTCCTTCCAGGTCCTGTGTCCCTCAGCTAATGGTATACTTCTCTTGGGACCCAGAGATAAATGGGCATTATAGTTCAAATTATAATTAAGT-TTAGAACTCTATTGAGACAGAAGAAAGAAAACAGAGC-TGAGGTGAAATATCTCTGATAATCTGTGTTGGTTAATATCTAGGATCCTAGTACCAGAC-ATGTCAGAGTCTGAGCTGGTGTCTTCTGCCTGTAAGACACTACCTCTCTAGCAACTGAATTTAGGAAATAGAATCgtaattccagcacgttagggaggccagggtgggcagaccgtctgaggtcgggagttcaataccagcctggccaacatggggaaaccctgtctctactaaaaatacaaaacttagctgggtgtggtggcacgtgca----------------------------------cacgcatacacacacac--acacacctct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55786539 530 + 59248254 AACCTTTAAGATTTGGGGGGATGTTTTCACTCCTCTGTCGTCATGGGCTCCAATCTGCCCTCTATTTCCATGGCCCTTCCAGGTCCTGTGTCCCTCGGCTAGTGGTATGCTTTGCTTGGGACCCAAAGATATGTGGGCATTATAGTTCGAATTATAGTTAAGGTTTAGAACTCTATTGAGACAGAAGAAAGAAAACAGAACTTAAGGTGAAATCTGTCTGATAAGCTGTGTTGGTTGGTATCTCAGATCTTACTACCAGAT-ACGTTGGAGTCTGAGCTGGCGTCTTTTGCCTGTAAGACACTACCTCTCTAGCAACTGAATTTAGGAAATAGAATtgtaatcccagcacattagggaggccaggatgggcagatcatctgaggccgggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacagaatttagccgggtgtggtggtacacacacacacacacacacacacacacacacacacacacacacacacacacacacac----acaacacg i macFas5.chr19 C 0 I 13 s papAnu2.chr19 47892615 486 + 51301725 GACCTTTAAGATTTGGGGATATGTTTTCACTCCTCTGTTGTCATGGGCTCCAATCTGCCCTCTATTTCTATGGCCCTTCCAGGTCCTGTGTCCCTCAGCTAGTGGTATGCTTTGCTTGGGACCCAAAGATATGTGGGCAT--TAGTTCAAATTATAGTTAAGG-TTAGAACTC--ttgagacagaagaaagaaaacagaacttaAGGTGAAATCTGTCTGATAAGCTGTGTTGGTTGGTATCTCAGATCCTACTACCAGATAACGTTGGAGTCTGAGCTGGCGTCTTTTGCCTGTAAGACACTACCTCTCTAGCAACTGAATTTAGGAAAtagaattgtaatcccagcacattagggaggccaggatgggcagatcatctgaggccgggagttcgagaccagcctggccaacgtggtgaaaccctgtctctactaaaaatacagaacttagctgggtgtggtggtacacaca----------------------------------------cacacacacac----aaaacacg i papAnu2.chr19 C 0 I 13 s chlSab2.chr6 47600389 481 + 50890351 GACCTTTAAGATTTGGGGGTATGTTTTCACTCCTCTGTCATCATGGGCTCCAATCTGCCCTCTTTTGCCATGGCCCTTCCAGGTCCTGTGTCCCTCAGCTAGTGGTATACTTTGCTTGGGACCCAAAGATATCTGGGCATTATAGTTCAAATTATAGTTAAGG-TTAGAACTCTATTGAGACAGAAGAAAGAAAACGGAACTTAAGGTGAAATCTGTCTGATAAGCTGTGTTGGTTGGTATCTCAGATCTTACTACCAGAT-ACGTTGGAGTCTGAGCTGGCAGCTTTTGCCTGTAAGACACTACCTCTCTAGCAACTGAATTTAGGAAATAGAATtgtaatcccagcacattagggaggccaggatgggcagatcatctgaggccgggagttcgagaccagcctggccaacatggtgaaaccctgtctgtactaaaaatacagaacttagccgggtgtggtggtacacaca------------------------------------------------cac----acaacacg i chlSab2.chr6 C 0 I 13 e canFam3.chr1 20055635 1311 - 122678785 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e rheMac3.chr19 60645416 639 + 64156825 I a score=276494.000000 s hg38.chr19_GL949747v2_alt 638947 120 + 729520 gtaatcccagctactcggaaggctggggcacaagaatcgcgtgaaaccaggaggcggaggttgaagtgagccaccgtgccaGCTgagaatcctttttacttctccaacttctgttggcca s panTro4.chr19 59907952 120 + 63644993 gtaatcccagctactcggaaggctggggcacaagaatcgcgtgaacccaggaggtggaggttgaagtgagccACCGTGCCCGCTgagaatcctttttacttctccaacttctgttggcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56838850 120 + 60714840 gtaatcccagctactcagaaggctgggacacaagaatcgcgtgaacccaggaggcggaggttgaagtgagccaccgtgcccactgagaatcctttttacttcttcaacttctgttggcca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103349355 117 - 106955855 gtaatcccagctactcggaaagctggggcacaagagtcgcgtgaacccaggaggcagaggttgaagtgagccACCGTGCCCGCTgagaatcttttttactt---caactcttgttggcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646055 120 + 64156825 gtaatcccagatattcggaaaactggggcatgagaatcgcgtgaaccggggaagcggaggttgaagtgagccaccgtgccTGCTgaggatcctttttacttctccagcttctgttggcca i rheMac3.chr19 I 639 C 0 s macFas5.chr19 55787082 120 + 59248254 gtaatcccagatattcggaagactggggcatgagaatcgcgtgaacccgggaagcagaggttgaagtgagccACCGTGCCCGCTgaggatcctttttacttctccagcttctgttggcca i macFas5.chr19 I 13 C 0 s papAnu2.chr19 47893114 120 + 51301725 gtaatcccagatattcggaagactggggcatgagaatcgcgtgaactcaggaagcggaggttgaagtgagccactgtgcctgctgaGGATCCTTTTTACTTCTCCAGCTTCTGttggcca i papAnu2.chr19 I 13 C 0 s chlSab2.chr6 47600883 120 + 50890351 gtaatcccagatattcggaacactggggcatgagaatcgcgtgaacccgggaagcggaggttgaagtgagccACCGTGCCCGCTAAGGATCCTTTTTActtctccagcttctgttggcca i chlSab2.chr6 I 13 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I a score=451126.000000 s hg38.chr19_GL949747v2_alt 639067 164 + 729520 cctgcattccttggcttgtgg-cccttcctccaa---------cttcggcagagcatcttcaaacgttgccctggctcccttatca-cgtcacctcctgctggctttgactctca-gctccctcttatgaggatccctgtgattg-ctggacctacccaaataa----accaggatataaa s panTro4.chr19 59908072 164 + 63644993 cctgcattccttggcttgtgg-cccttcctccag---------cttcagcagagcatcttcaaacgttgccctggctcccttatca-cgtcacctcctgctggctttgactctca-gctccctcttatgaggatccctgtgattg-ctggacctacccaaataa----accaggatataaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56838970 164 + 60714840 cctgtattccttggcttgtgg-cccttcctccaa---------cttcagcacagcgtcttcacacgttgctctggctcccttatca-cgtcacctcctgctggcttggactctca-gctccctcttatgaggatccctgtgattg-ctggacctacccaaataa----accaggatataat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103349472 163 - 106955855 cctgcattccttggcttgtgg-cccttcctccaa---------cttcagcagagcatctg-aaacgttgctctggctcccttatca-cgtcacctcctgctggctttgacgctca-gctccctcttacgaggatccctgtgattg-ctggacctacccaaataa----accaggatataaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646175 164 + 64156825 cctgcattccttggcttgtgg-cccttcctccag---------cttcagcagagcatcttcaaacattgctctggctcccttatca-cgtcacctcctgctggctttgactgtca-gctccctcttacgaggatccctgtgattt-ctggacctacccaaataa----accaggatataaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55787202 164 + 59248254 cctgcattccttggcttgtgg-cccttcctccag---------cttcagcagagcatcttcaaacattgctctggctcccttatca-cgtcacctcctgctggctttcactgtca-gctccctcttacgaggatccctgtgattt-ctggacctacccaaataa----accaggatataaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47893234 164 + 51301725 cctgcattccttggcttgtgg-cccttCCTCCAG---------CTTCAGCAGAGCATCTTCAAACATTGCTCTGGCTCCCTTATCA-CGCCACCTCCTGCTGGCTTTGACTCTCA-GCTCCCTCTTACAAGGATCCCTGTGATTT-CTGGACCTACCCAAATAA----ACCAGGATATAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601003 164 + 50890351 cctgcattccttggcttgtgg-cccttcctccag---------cttcagcagagcatcttcaaacattgctctggctcccttatca-catcacctcctgctggctttgactctca-gctccctcttacgaggatccctgtgattt-ctggacctacccaaataa----accaggatataaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20056946 181 - 122678785 cctgcatcccttggctcatggtcccttccttcatggccaaagccagcagcatagtgtcttcaaatgtccttctgtctttctcatcacctttcccccctgctggctttgactctcattctccttcttataaggatccttgtaattaccttggctcacctggataatctccccacctcctaga i canFam3.chr1 I 1311 C 0 e calJac3.chr22_GL285922_random 2520 59 + 138250 I a score=216064.000000 s hg38.chr19_GL949747v2_alt 639231 77 + 729520 ccatctt--aagatgctcagtcacctcta-----cgaggtcccttttg----------------ctcgcaggtgccaggagttgggacttggacatcttt s panTro4.chr19 59908236 77 + 63644993 ccatctt--aagatgctcagtcacctcta-----cgaggtcccttttg----------------ctcgcaggtgccaggagttgggacttggacatcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839134 77 + 60714840 ccatctt--aagatgctcagtcacatcta-----cgaggtcccttttg----------------ctcgcaggtgccaggagttgggacttggacatcttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103349635 77 - 106955855 ccatctt--aagatgctcagtcacatctt-----ctaggtcccttttg----------------ctcgcaggtgccaggagttgggacttggacatcttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646339 81 + 64156825 gcatctt--aagaagctcagtcacatctaagatgcaaggtcccttttg----------------ctcacaggtgccagaagttgggacttggacatctt- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55787366 81 + 59248254 gcatctt--aagaagctcagtcacatctaagatgcaaggtcccttttg----------------ctcacaggtgccagaagttgggacttggacatctt- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47893398 81 + 51301725 GCATCTT--AAGAAGCTCAGTCACATCTAAGATGCGAGGTCCCTTTTG----------------CTCACAGGTGCCAGGAGTTGGGACTTGGACATCTT- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601167 81 + 50890351 gcatctt--aagaagctcagtcacatctaagatgcaaggtcccttttg----------------ctcacaggtgccaggagttgggacttggacatctt- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2579 77 + 138250 ccatctcaaaagaTTCTCAGTCACTTCTA-----GGAGGTCCCTGTTG----------------CTGGCAGG-Gccagaggttaggacttggacatctt- i calJac3.chr22_GL285922_random I 59 C 0 s canFam3.chr1 20057127 87 - 122678785 ---tcct-----ttattcaaccacacctg-----caaagtcccctttgtatgtaacataacatattcacagggaccagggattatcacatagacatcttt i canFam3.chr1 C 0 I 106 a score=103333.000000 s hg38.chr19_GL949747v2_alt 639308 33 + 729520 aggggaggccattcttctgtccaccacaCCACC s panTro4.chr19 59908313 33 + 63644993 aggggaggccattcttctgtccaccacaCCACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839211 33 + 60714840 aggggaggccattcttctgtccaccacaCCACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103349712 32 - 106955855 gggggaggccattcttctgtccaccacGCCA-C i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646420 32 + 64156825 -ggggaggccattcttctgtccaccacGCCACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55787447 32 + 59248254 -ggggaggccattcttctgtccaccacGCCACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47893479 32 + 51301725 -GGGGAGGCCATTCTTCTGTCCACCACGCCACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601248 32 + 50890351 -ggggaggccattcttctgtccaccgcGCCACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2656 33 + 138250 gggggaggccattcttctgtccaccacaCCACC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057214 106 - 122678785 I a score=999828.000000 s hg38.chr19_GL949747v2_alt 639341 308 + 729520 CCATGATTCCATTTCCATGTCACCACTGTCTC-TAAGTGTGTCT--AACCCACGGCTCAAGAGTCAAA------------GGTGCATCACAGCAGTGAGAACTCACAGGTTCGGGTTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTTTGGAACTGCGACATAACTAGCGATGGCTGCTGCGATCTCACAAAGCTTCTCCAAGAAAAATCAAGCCTGTTGTGTTTGGATCTGGGGCTGAATCACATAGGAGTTAAGGGAATGAAGTTCCTGTGTGAGGCTTTGAGGAAACCACTGTGCAACTTGAGATGTCTGTGGTGAGTTA s panTro4.chr19 59908346 298 + 63644993 CCATGATTCCATTTCCATGTCACCACTGTCTC-TAA------------CCCACGGCTCAAGAGTCAAA------------GGTGCATCACAGCAGTGAGAACTCACAGGTTCGGGTTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTTTGGAACTGCGACATAACTAGCGATGGCTGCTGCGATCTCGCAAAGCTTCTCCAAGAAAAATCAAGCCTGTCGTGTTTGGATCTGGGGCTGAATCACATAGGAGTTAAGGGAATGAAGTTCCTGTGTGAGGCTTTGAGGAAACCACTGTGCAACTTGAGATGTCTGTGGTGAGTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839244 308 + 60714840 CCATGATTCCATTTCCATGTCACCACTGTCTC-TAAGTGTGTCT--AACCCACGGCTCAAGAGTCAAA------------GGTGCATCACACCAGTGAGAACTCACAGGTTCGGGTTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTTTGGAACTGCAACATAACTAGCAATGGCTGCTGCAATCTCGCAAAGCTTCTCCAAGAAAAATCAAGCCTATCGTGTTTGGATCTGGGGCTGAATTACATAGGAGTTAGCGGAATGAAGCTCCTGTGTGAGGCTTTGAGGAAACCACTGTGCAACTTGAGATGTCTGTGGTGAGTTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103349744 309 - 106955855 CCACGATTCCATTTCCACGTCACCATTGTCTC-TAAGTGTGTCTAAAACCCACGGCTC-AGAGTCGAA------------GGTGCATCACACCACTGAGAACTCACAGGTTCGGGTTTTCTTTCTTCCTGTGGTTGATTTCTAGGCTATGGAACTGCGACATAACTAGCGATGGCTGCTGCGATCTTGCAAAGCTTCTCCAAGAAAAATCAAGCCTATCGTGTTTGGATCTGGGGCTGAATCACATAGGAGTTATCGGAGTGAAACTCCTGTGCGAGGCTTTGAGGAAACCACTGTGCAACTTGAAATGTCTGTGGTGAGTTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646452 308 + 64156825 CCATGATTCCATTTCCAGGTCACCATTGTCTCTTAAGCGTGTCTAAAACCCATGGCTC---AGTCGAA------------GGTGCCTCACACCAGTGAGAACTCACAGGTTCAGGCTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTGTGGAACTGCGACATCACGAGCGATGGCTGCTGCAGTCTCGCAAAGCTCCTCCAAGAAAAATCAAGCCTGTCGTGTTTGGATCTTGGACTGAATCACATAGGAGTTACCGGAGTGAAGGTCCTGTGCGAGGCTTTGAGCAAACCACTGTGCAACTTGAGATGTCTGTGGTGAGTTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55787479 310 + 59248254 CCATGATTCCATTTCCAGGTCACCATTGTCTCTTAAGCGTGTCTAAAACCCATGGCTC-AGAGTCGAA------------GGTGCCTCACACCAGTGAGAACTCACAGGTTCAGGCTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTGTGGAACTGCGACATCACGAGCGATGGCTGCTGCAGTCTCGCAAAGCTCCTCCAAGAAAAATCAAGCCTGTCGTGTTTGGATCTTGGACTGAATCACATAGGAGTTACCGGAGTGAAGGTCCTGTGCGAGGCTTTGAGCAAACCACTGTGCAACTTGAAATGTCTGTGGTGAGTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47893511 309 + 51301725 CCATGATTCCATTTCCAGGTCACCATTGTCTC-TAAGCGTGTCTAAAACCCACGGCTC-AGAGTCGAA------------GGTGCCTCACACCAGTGAGAACTCACAGGTTCGGGCTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTGTGGAACTGCGACATCACGAGCGATGGCTGCTGCAGTCTCGCAAAGCTCCTCCAAGAAAAATCAAGCCTGTCGTGTTTGGATCTTGGACTGAATCACATAGGAGTTACCGGAGTGAAGGTCCTATGCGAGGCTTTGAGCAAACCACTGTGCAACTTGAGATGTCTGTGGTGAGTTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601280 309 + 50890351 CCATGATTCCATTTCCAGGTCACCATTGTCTC-TAAGCGTGTCTAAAACCCACGGCTC-AGAGTCGAA------------GGTGCCTCACACCAGTGAGAACTCACAGGTTTGGGCTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTGTGGAACTGCGACATCACAAGCGATGGCTGCTGCAGTCTCGCAAAGCTCCTCCAAGAAAAATCAAGCCTGTCGTGTTTGGATCTTGGACTGAATCACATAGGAGTTACCGGAGTGAAGGTCCTGTGCGAGGCTTTGAGCAAACCACTGTGCAACTTGAGATGTCTGTGGTGAGTTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2689 307 + 138250 CCATGATTCCA-TTCCATGTCACCATTGCCTC-TAAGAGCGTCCGAAGCCCATGGCTC-GGAGCTGAA------------GGTGCATCACACCAGCGAGAACTAACAGGTTTGGATTTTC-TTCTTTGTGTGGGTGATTTCTAGGCTGTGGAACTGTGACATAACTAGCAAAGGCTGCTGTCACCTCGCAAAGCTTCTCCACGAAAAATCAAGCCTAACGAACTTGGATCTGGGGCGGAATGACATAGGAGTTCCCGGAGTGCAGGGCCTATGTGAGGCTTTGAAGAAACCACTGTGTAACTTGAAACGTCTGTGGTGAGTCA i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20057320 313 - 122678785 CCATGATTTCATTTCCATGTC-CCATTGTCTG-AAAGCTTGTCTAAATCCTGCAGCTT-GAGGTCAACAACATTGGTTTTGGTGTATCTCCTCAGGGAAGACTCA-------GAGTTTACTTTCTTCATGTGATTGATTTCTAGGCTTTGGTATTGCAGCATAACCAGTGGTGGCTGCAATCATCTGTCAACACTTCTCCAGCAAAATTCAAACCTTACCCACTTGGATCTGGGGCTGAATCACATAGGGATTACTGGACTGAAGTTTCTGTGTGAGGCTTTGAAGAACCCAATGTGTAACCTCAAATGCCTATGGTAAGTTA i canFam3.chr1 I 106 I 3553 a score=363709.000000 s hg38.chr19_GL949747v2_alt 639649 158 + 729520 ACTTATAAGTTCAACTTCCTATACTTACACCTTACTGAATCTGTGGCTAGTGTAAAATAATCAGTGAAGCCGACTTCCCAAGTTATATAATTGAGAGGACCTTTATAGAGTCGATCGAGCATTTACTAGGATGGTTAAAGGAATAAGTtctagtctat s panTro4.chr19 59908644 158 + 63644993 ACTTATAAGTTCAACTTCCTATACTTACACCTTACTGAATCTGTGGCTAGTGTAAAATAATCAGTGAAGCCGACTTCCTAAGTTATATAATTGAGAGGACCTTTATAGAGTCAATCGAGCATTTACTAGGATGGTTAAAGGAATGAGTTCTAGTCTAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839552 158 + 60714840 ACTTATAAGTTCAACTTCCTATACTTATACCTTATTGAATCTGTGGCTAGTGTAAAATAATCAGTGAAGCTGACTTCCCAAGTTATATAATTGAGAGGACTTCTATAGAGTCGATCGAGCATTTACTAGGATGGTTAAAGGAATAAGTTCTAGTCTAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350053 153 - 106955855 ACTTATAAGTTCAACTTCCTATGCTTATACCTTATCGAATCTGTGGCTAAT-----AGAATCAGTGAAGCCAACCTCCCAAGTTATATAATTGACAGGACTTGGATAGAGTCAATTGAGCATTCACTAGGATGGTTAAAGGAATAAGTTCTAGTCTAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646760 143 + 64156825 ACTTATAAGTTCAACTTCCTCTACTTAGACCTTATTGAATCTGTGGCTAACGTGAAGCAATCAGTGAAACCG--------------GTAATTGAGAGGACTCGGATAGAGTCAACCGAGCTTTCACTAAGGTAGTTAAAGGAAT-AGTTCTAGTCTAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55787789 143 + 59248254 ACTTATAAGTTCAACTTCCTCTACTTAGACCTTATTGAATCTGTGGCTAACGTGAAGCAATCAGTGAAACCG--------------GCAATTGAGAGGACTCGGATAGAGCCAACCGAGCTTTCACTAAGATAGTTAAAGGAAT-AGTTCTAGTCTAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47893820 157 + 51301725 ACTTATAAGTTCAACTTCCTCTACTTAGACCTTATTGAATCTGTGGCTAATGTAAAGCAATCAGTGAAACTGACTTCCCAAGTTATGTAATTGAGAGGACTTGGATAGAGTCAACCGagctttcactaagatagttaaAGGAAT-AGTTCTAGTCTAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601589 143 + 50890351 ACTTATAACTTCAACTTCCTCTACTTAGACCTTATCGAATCTGTGGCTAATGTAAAGCAATCAGTGAAACCG--------------GTAATTGAGAGGACTTGGATAGAGTCAACCGAGCTTTCACTGAGATAGTTAAAGGAAT-AGTTCTAGTCTAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2996 155 + 138250 CCTCATAAGTTCAACTTACTACGTTTACACCTTATTGAATCTGTGTCTAATGTAAAACAATCGGGGAAGGAGACTCCTC-GGTGAGATAATTGAGAGGACCTGAAT--GGTCAGTCGAGCATGCACTAGGATGGCTAGAGGAGTATGTTCTAGTCTGT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I a score=20570.000000 s hg38.chr19_GL949747v2_alt 639807 24 + 729520 gtctaagttttt----gttttttttttt s panTro4.chr19 59908802 23 + 63644993 GTCTAAGttttt-----ttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839710 12 + 60714840 G----------------ttttttttatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350206 28 - 106955855 GTCTGAGttttttgtttgttgttttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646903 21 + 64156825 GTCTAAGTCTC-------tttttttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55787932 19 + 59248254 GTCTAAGtctc---------tttttttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47893977 24 + 51301725 GTctaagtctct----cttttttttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601732 24 + 50890351 GTCTAAGtcttc----tttttttttttt i chlSab2.chr6 C 0 I 146 e canFam3.chr1 20057633 3553 - 122678785 I e calJac3.chr22_GL285922_random 3151 0 + 138250 C a score=281449.000000 s hg38.chr19_GL949747v2_alt 639831 188 + 729520 ctt-----gaagttttgctcttgtcacataggctggagtgcagtggcgtgatcttggctcactgcaacctccgcctcccaggttcaagcaattctcttgcttcagcttcccgagtagctgggattacaggcgcccgccaccatgcccagctaa-ttcttgta-tttttagtagagacagggtttcgccatgttga s panTro4.chr19 59908825 188 + 63644993 ctt-----gaagttttgctcttgtcacataggctggagtgcagtggcgtgatcttggctcactgcaacctccacctcccaggttcaagcaattctcttgcttcagcttcccgagtagctgggattacaggcacccgccaccatgcccagctaa-ttcttgta-tttttagtagagacagggtttcgccatgttga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839722 186 + 60714840 ctt-----gaagctttgctcttgt--cataggctggagtgcaatggcgtgatcttggctcactgcaacctccgcctctcaggttcaagcagttctcttgcctcagcttcccaagtagttgggattacaggcgcccgccaccatgcccagctaa-tttttgta-tttttagtagagacagggtttcgccatgttga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350234 193 - 106955855 cttgaggcgaagttttgctcttgtcacataggctggagggcaatggcgtgatcttggctcactgcaacatccgcctcccggattcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcccgccaccacgcccagctaa-tgtttgta-tttttagtagagacagggtttcgccatgttga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646924 189 + 64156825 ttt-----gagacggagtctttgtcgcccaggctggagtgcagtggccggatcgcagctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccacctcgcccagctag-ttgttgtattttttagtagagacggggtttcaccaggttag i rheMac3.chr19 C 0 I 21 s macFas5.chr19 55787951 190 + 59248254 ttt-----gagacggagtctttgtcgcccaggctggagtgcagtggccggatctcagctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccacctcgcccggctagttttttgtattttttagtagagacggggtttcaccaggttag i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47894001 190 + 51301725 ttt-----gagacagagtctttgtcgcccaggctggagtgcagtggccggatctcggctcactgcaagctccgcctcccgggttcatgccattctcctgcctcagcctcccgagtagctgggactacgggcgcccgccacgttgcccagctagttttttacattttttagtagagacggggtttcaccaggttag i papAnu2.chr19 C 0 I 2 e canFam3.chr1 20057633 3553 - 122678785 I e calJac3.chr22_GL285922_random 3151 0 + 138250 C e chlSab2.chr6 47601756 146 + 50890351 I a score=27932.000000 s hg38.chr19_GL949747v2_alt 640019 25 + 729520 aggttcatctcaaactcctgacctc s panTro4.chr19 59909013 25 + 63644993 aggttcatctcaaactcctgacctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839908 25 + 60714840 aggttcatctcaaattcctgacctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350427 25 - 106955855 aggttcatctcaaactcctgacctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55788143 25 + 59248254 aggatggtctcgatctcctgacctc i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47894193 25 + 51301725 aggatggtctcgatctcctgacctc i papAnu2.chr19 I 2 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e calJac3.chr22_GL285922_random 3151 0 + 138250 C e chlSab2.chr6 47601756 146 + 50890351 I e rheMac3.chr19 60647113 21 + 64156825 I a score=910.000000 s hg38.chr19_GL949747v2_alt 640044 1 + 729520 a s panTro4.chr19 59909038 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839933 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350452 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55788168 1 + 59248254 a i macFas5.chr19 C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e calJac3.chr22_GL285922_random 3151 0 + 138250 C e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e rheMac3.chr19 60647113 21 + 64156825 I a score=18759.000000 s hg38.chr19_GL949747v2_alt 640045 33 + 729520 ggtgatccgcccatctcggcctcccaaagtgct s panTro4.chr19 59909039 33 + 63644993 ggtgatccgcccatctcggcctcccaaagtgct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839934 33 + 60714840 ggtgatccacccatctcggcctcccaaagtgct i ponAbe2.chr19 C 0 I 153 s nomLeu3.chr10 103350453 33 - 106955855 ggtgatccgcccatctcggcctcccaaagtgct i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e calJac3.chr22_GL285922_random 3151 0 + 138250 C e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=13704.000000 s hg38.chr19_GL949747v2_alt 640078 56 + 729520 gggattacaggcgtgagccactgcgccaggccctatgtctaagttctagtctgtgt s panTro4.chr19 59909072 56 + 63644993 gggattacaggcgtgagccactgcgcccggccCCAGATGGAGGTTCTAGTCTGTGT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103350486 56 - 106955855 gggattacaggcgtgagccactgcgcccggccCTATGTGTAAGTTCTAGTCTGTGT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e ponAbe2.chr19 56839967 153 + 60714840 I e calJac3.chr22_GL285922_random 3151 0 + 138250 C e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=5214.000000 s hg38.chr19_GL949747v2_alt 640134 11 + 729520 catgCAAAGAA s panTro4.chr19 59909128 11 + 63644993 TATGCAAAGAA i panTro4.chr19 C 0 M 393 s nomLeu3.chr10 103350542 11 - 106955855 CATGCAAAGAA i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 3151 11 + 138250 CATGCAAAGAC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e ponAbe2.chr19 56839967 153 + 60714840 I e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=7827.000000 s hg38.chr19_GL949747v2_alt 640145 51 + 729520 CACCTGTGAAATTTTAAGGATACAGTGCCTCAAGCCATTCAGCCAAAAGCC s nomLeu3.chr10 103350553 50 - 106955855 CACCTGTGAAATGTTAAGGATACAGTG-CTCAAGCCATTCAGCCCAAAGCC i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 3162 50 + 138250 CAGCCATGGCATTTTGAGGATACAAGGCCTCAAGCCATTCAGATGAAATC- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e ponAbe2.chr19 56839967 153 + 60714840 I e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I e panTro4.chr19 59909139 393 + 63644993 M a score=1146.000000 s hg38.chr19_GL949747v2_alt 640196 2 + 729520 AC s ponAbe2.chr19 56840120 2 + 60714840 AC i ponAbe2.chr19 I 153 C 0 s nomLeu3.chr10 103350603 2 - 106955855 AC i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 3212 2 + 138250 AC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I e panTro4.chr19 59909139 393 + 63644993 M a score=83351.000000 s hg38.chr19_GL949747v2_alt 640198 99 + 729520 TGCCCAGCACCCCACATTCAGAGAGGTGGGAATTGggccaggcacagtggctcatacctgtaatcccagcacttcgggaggccgaagcgggcggatcac s panTro4.chr19 59909532 99 + 63644993 TGCCCAGCACCCCACATTCAGAGAGGTGGGAATTGggccaggcacagtggctcacacctgtaatcccagcacttcgggaggccgaagtgggcggatcac i panTro4.chr19 M 393 C 0 s ponAbe2.chr19 56840122 99 + 60714840 TGCCCAGCACCCCACATTCAGAGAGGTAGGAATTAggccaggcatggtggctcacacctgtaatcccagcactttgggaggccgaagcgggcggatcac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350605 99 - 106955855 TGCCCAGCACCCCACAGTCAGAGAGGTAGGAATTGCgcccggcacggtggctcacacctgtaatcccagcactttgggaggccgaagtgggcggatcac i nomLeu3.chr10 C 0 M 100 s calJac3.chr22_GL285922_random 3214 98 + 138250 TG-CCAACACCCCACATTCAGAGAGGTAGGAATTGggccgggcgcggtggctcacacctgtaatcccagcactttgagaggccgaagcaggtggatcac i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=172382.000000 s hg38.chr19_GL949747v2_alt 640297 444 + 729520 ttaaggtcaggagctcaagaccagcctggccaacttga---aactccatctctactaaaa-tataaaaattagccgagcatagtagtgggtgcctcttttttttttttttttttttttgagat--agtttcactcttgttgcccaggctgtagtgtaatggcgcgatctcagctcactgcaacctccacctcctgggttcaagtgattctcctgccttagcctcccacatagctgcaaataaacaggcatgtgccaccatgcctggctaa--ttttgtatttttagtatagacggggtttctccatgttggtcaggctggtctcgacctccggacct----------------------------------------caggtgagagccaccgtgcccagccagtaggtgcctt------------------------------------taatcccagctacttgggaggctgaggcaggagaatcacttgaaccctggaggcagaggttgcagtgagctgagatcc s panTro4.chr19 59909631 447 + 63644993 ttaaggtcaggagctcaagaccagcctggccaacttgatgaaactccatctctactaaaaatataaaaattagccgagcgtagtagtgggtgcctctttttgttttttttttttttt-gagat--agtttcattcttgttgcccaggctgtagtgcaatggcgcgatctcagctcactgcaacctccacctcctgggttcaagtgattctcctgccttagcctcccacgtagctgcaaataaacaggcatgtgccaccatgcctggctaa--ttttgtatttttagtatagacggggtttctccatgttggtcaggctggtctcgacctcccgacct----------------------------------------cgggtgagagccaccgtgcccagccagtaggtgcctt------------------------------------taatcccagctacttgggaggctgaggcaggagaatcacttgaaccctggaggcagaggttgcagtgagctgagatcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56840221 438 + 60714840 ttgaggtcaggagctcaagaccagcctggccaacttggtgaaactccatctctactaaaaatataaaaattagccgagtgtagtagtggatgcctctttttttttttttttttt----gagac--agtttcacccttgttgtccagactggagtgcaatggcacgatctcagctcactg------ccacctcctgggttcaagtgattctcctgccttaacctcccaagtagctggaaataaacaggcatgtgccaccacgcctggctaa--ttttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcgacctcccgacct----------------------------------------caggtgagagccactgcgcccagccagtaggtgcctt------------------------------------taatcccagctacttgggaggctgaggcaggagaatcacttgaaccctggagatggaggttgcagtgacctgagatcc i ponAbe2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 3312 470 + 138250 ttgaggtcaggagttcaagattagcctggcagacatggtgaaaccccatctc----------------------------------------------------tttttttttt----gagacggagtttcgctcttgttacccaggctggagtgcaatggcgcgatctcggctcaccgaaacctctgcctcctgggttcaggcaattctcctgcctcagcctcccgagtagctgggatt--acaggcacgcaccaccatgcccagccaattttttatatttttagtagagacggggtttcaccatgttgaccaggatggtctcgatctcttgaccttatgatccacctgcctcggcctcccaaaatgctgcaattacaggtgtgagccaccgcgcctggccttgtgaaaccccatctctactaaaaatccaaaatttagcctggcatggtaatcccagctgctcaggaggctgaggcagcagaatcccttaaacccaggaggtggaggttgcagtgagctgagatca i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e nomLeu3.chr10 103350704 100 - 106955855 M e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=236145.000000 s hg38.chr19_GL949747v2_alt 640741 338 + 729520 tgtcactacactccatcctgggctacaagagcaagactccatctcaggaaaaaataaaaaa------GAGGTAGGAATTAGATATCGTGCCAGAAAATGCTGGCTCTATCAGCAGGTGAGTGGTCTCAACTTGGCTATCTTACAAATACCTTGTGAGTTAGCTACAATCAGATGCACTTGAACCTGGAATCCTATCT-GGGAGGCAATCTTAAAAGAATTTGACTCGGGATgggcaaggtggctcatgcctgtaatcctggcattttgggagtccaaggcaggtagattgcttgaggccaagaatttaaaaacagcctggccaacacaatg-aagccctgtctcta s panTro4.chr19 59910078 330 + 63644993 tgtcactacactccatcctgggcgacaagagcaagactccatctcaggaaaaaataaaaaa------GAGGTAGGAATTAGA--------CAGAAAATGCTGGCTCTATCAGCAGGTGAGTGGTCTCAACTTGGCTATCTTACAAATCCCTTGTGAGTTAGCTACAATCAGATGCACTTGAACCTGGAATCCTACCT-GGGAGGCAATCTTAAAAGAATTTGACTCGGGATgggcaaggtggctcatgcctgtaatcccggcattttgggagtccaaggcaggtagattgcttgaggccaagaatttaaaaacaggctggccaacacaatg-aagccctgtctcta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56840659 338 + 60714840 tgtcactacactccatcctgggcgacaagagcaagactccatctcaggaaaaaataaagaa------GAGGTAGGAATTACACATCATGCCAGAAAATGCTGGCTCTATCAGCAGGTGAGTGGTCTCAACTTGGCTATCTTACAAATCCCTTGTGAGTTAGCTACAGTCAAATGCACTTGAACCTGGACTCCTACCT-GGGAGGCAATCTTAAAAGAATTTGACTCCGGATgggcaaggtggctcatgcctgtaatcccggcattttgggagtccaaggtaggtagattgcttgaggccaggaatttaaaaacagcctggccaacacaatg-aaaccctgtctcta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350804 343 - 106955855 tgtcactatactccatcctgggcgacaagagcaagactccatctcaggaaaaaaaaaaaaaaaaaAGGGGGTAGGAATTGGACATCGTGCCAGAAAATGCTGGCTCTATCAGCAGGTGAGTGGTCTCAACTTGGCTATCTTACAAATCCCTTGTGAGTTACCTACAGTCAAATGCACTCGAACCTGGAATCCTGCCCGGGGAGGGAATCTTAAAATAATTTGACTCCAgctgggcaaggtggctcacgcctgtaatcccagcactttgggaggccaaggtgggcggatcac--gaggtcaggagatcgagaccagcctggccaacgtggtg-aaaccctgtctcta i nomLeu3.chr10 M 100 C 0 s calJac3.chr22_GL285922_random 3782 314 + 138250 catcgttgcactccatcctgggtgacaagagcgagactccctctcagaaaaaaa-------------GACGCAGGAATTGGACCTCATGCCAGAAAAT-------------GCAGGTGAATGGTCTCAAACCAGCTGTCGTACAGATCCCATGTGAGTTAGGTACAATCTAATGCACTTGAACCTGAAATCCTCCCT-GGAAGGGAATCTT-----AATTTGATTGCAGTTgggtgaagtggctcatgcctgtaatcccagcattttgggagtctaaggcgggcagactgcttgaggccaacaatttaaaaacagcctggccagtacaatgcaaactctgtctcta i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=201823.000000 s hg38.chr19_GL949747v2_alt 641079 468 + 729520 ctgaaagtacaaaaatccgctgagcatggctgtgtac--ctctgctcccagttactcaggaggctgaggtgggaggatcacttgagcctgggaggaagaagttacagcgaattgagatcacgtcacctcactccagcctgggtgac--agtgagatcctgtctcaaaaaaaaaaaaaaaacaaaaaaaacaaaggcgcctttttaatcactcactgacacgtgtagaggagcaaaaagtttgagttgcTGGTTGgcccaggaggtcaaggctgcagtgagccaagatggcgttaccacactccagcctgggcaaccgagtgagaccgtgtttcaaa----aaataaaGTggcagggtgcagtggctcatgcctgtaattccagcactttgggaggccgaggcaggtggatcacctaaggtcaggagttcgtagaccagcctgtctctactaaagagaca-ggtgaaaccctgtctct s panTro4.chr19 59910408 457 + 63644993 ctgaaagtgcaaaaatccgctgagcgtggctgtgtac--ctctgctcccagttactcgggaggctgaggtgggaggatcacttgagcctgggaggaagaagttacagtgagctgagatcacgtcacctcactccagcctgggtgac--agtgagatcctgtctcaaaaaaaaaaaaaa-----------caaaggcgcctttttaatcactcactgacacgtgtagaggagcaaaaagtttgagttgcTGGTTGgcccaggaggtcaaggctgcagtgagccaagatggcgttaccacactccagcctgggcaaccgagtgggaccgtgtttcaaa----aaataaaGTggccgggtgcagtggctcatgcctgtaattccagcactttgggaggccgaggcaggtggatcacctaaggtcaggagttcgtagaccagcctgtctctactaaagagaca-ggtgaaaccctgtctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56840997 446 + 60714840 ctaaaagtacaaaaatcagctgagcgtggctgtgtac--ctctgctcccagttactcgggaggctgaggtgggaggatcacttgagcctgggaggaagaagttacagtgaactgagatcacgtcacctcactccagcctgggtgac--agtgagatcctgtctcaaaaa---------------------aaaGGCGCCTTTTTAATCACTCACTGACACATGTAGAGGAGCAAAAAGTTTGAGTTGCTGGTTGgcccaggaggtcaaggctgcagtgagccaagctggtgttaccacactccagcctgggcaactgagtgagaccatgtttcaaa----aaaTTAAGTggccgggtgcagtggctcatgcctgtaattccagcactttgggaggctgaggcaggtggatcacctaaggtaaggagtttg-agaccagcctgtctctactaaagagaca-ggtgaaaccctgtctct i ponAbe2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 4096 432 + 138250 ctaaaagtacaaaaattagctgggcatggctgtgcacgtctgtgctctcagctactcaggaggctgaagtgggagaatcacttgagcctgggaggaagaagttacagtgaactgaga----------gcactccagcctggatgacagagtgagatcctgtctcaaaaaaaaaaaaaaaaa---------aaaGGCACCTTTTTAATCACTCACTGACACGGGCAGAGGGGCAAAAAGTTTGAGTT---------------aggtcgaggctgcagtgagccaagatggtgccaccacactccagcctgggcaacagagtgagaccttgtctcaaaagagaaaagaaGTggctgggcacggtggctaacactagtaatcccagcactttgggagactgaggcgggtggatcaactgagatcaggagttcg-agaccagcctggcc----------aacatggtgaaaccacgtctct i calJac3.chr22_GL285922_random C 0 I 1 e canFam3.chr1 20057633 3553 - 122678785 I e nomLeu3.chr10 103351147 0 - 106955855 C e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=141056.000000 s hg38.chr19_GL949747v2_alt 641547 191 + 729520 ctaaaaccacaaaaatcaggcaggcatggtggcacatagctataatctcatctacttg-------gaggcacgagaactgcttgaatccaggaggcagaggctacagtgagccgagatcatgccacagcactccagccctggcgagagagcaagact--gtctcaa---agaataaCTTCAAAGATGGaagt-------tatttaacctc s panTro4.chr19 59910865 191 + 63644993 ctaaaaccacaaaaatcaggcgggcatggtggcacatagctataatctcatctactcg-------gaggcacgagaactgcttgaatccgggaggcagaggttacagtgagccgagatcatgccacagcactccagccttggcgagagagcaagact--gtctcaa---agaataaCTTCAAAGATGGaagt-------tatttaacctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56841443 189 + 60714840 ataaaaccacaaaaattaggcgggcatggtggcacatagctataatctcatctacttg-------gaggcacaagaactgcttgaatccaggaggcagaggttacagtgagccgagatcatgccacagcactccagccttggcgatagagcgagact--gtctcaa---agaataaCTTCAAAGATGGAAGT-------TATTTAAc--c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351147 191 - 106955855 ctaaaaccacaaaaattagccgggcgtggtggcacatagctataatctcatctattgg-------gaggcacgagaactgcgtgaattcaggaggcagaggttacagtgagctgagatcatgccacagcactccagccttggcaatagagcgagact--gtctcta---agaataactttaaagacggaagt-------tatttaacctc i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 4529 210 + 138250 ttaaaaacacaaaaattagccaggcatggtggcacatagccataatctcgtctatttgggagactgaggcacgagaattgcttgaatctgggaggccgaggttgcagtgacccaggatcaccccatagcactcaagcctcgatgacagagcgagactccatctcaaaaGagagtaacttataagatggaagttacttaatacttaaccgc i calJac3.chr22_GL285922_random I 1 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=337210.000000 s hg38.chr19_GL949747v2_alt 641738 371 + 729520 tctgctcaaaagcctcagtgcttccctatgtcaatccaggtaaaatcctatattgacgatggcttcagggtcttctgtgagctggccactgcttacctatgacctcatct-tgacaatcctccctgtctca--ctcatgcccgctgcctggatgttctattttacgtgtcagtcacatgtatcttcagggcctctgcacaagctatttctctgcctggagaactcccccccgag----ctctatgactcggtctcttcacccc-------------ctCACCT-----CCAACCATTGTAGCCAGAA-CCCCCAGTTATTCCCTG--TACCCCTTGCCCTTCAGAACCCCT-------------CATCGCCTCCATAT-TTTCCTGTTAGCAGATGAGCCCTGAGGGCGGAGA s panTro4.chr19 59911056 371 + 63644993 tctgctcaaaagcctcagtgcttccctatgtcaatccaggtaaaatcctatattgacaatggcttcagggtcttctgtgagctggccaccgcttacctatgacctcatct-tgacaatcctccctgtctca--ctcatgcccgctgcctggatgttctattttacgtgtcagtcacatgtatcttcagggcctctgcacaagctatttctctgcctggagaactcccccccgag----ctctatgacttggtctcttcacccc-------------cttACCT-----CCAACCATTGTAGCCAGAA-CCCCCAGTTATTCCCTG--TACCCCTTGCCCTTCATAACCCCT-------------CATCGCCTCCATAT-TTTCCTGTTAGCAGATGAGCCCTGAGGGCGGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56841632 369 + 60714840 tccgctcaaaagcctcagtgcttccctatgtcaatccaggtaaaatcctatattgacaatggcctcagggtcttctgtgagctggccaccgcttacctatgacctcatgt-tgacaatcctccctggctca--ctcatgcccgctgcctggatgttctatttcacatgtcaatcacatgtatcttcagggcctctgcacaagctatttctctgcctggagaact-ccccccGAG----CTCTATGACTCAGTCTCTTCACCCC-------------CTCACCT-----CCAACCATTGTAGCCAGAA-CCCTCAGTTATTCCCTG--TACCCCTTGCCCTTCATAACCCCT-------------CATCACCTCCATAT-TTTCCTGTTAGCAGATGAG-CCTGAGAGCAGAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351338 370 - 106955855 tctgctcaaaagcctcagtgcttccctatgtcaatctaggtaaaatcctatattgacgacggcctcgccgtcttctgtgagctggccaccgcttacctatgacctcatct-tgacaatcctccctggctca--ctcctgcccgctgcctggatgttctattttacgtgtcaatcacatgcatcttcagggcctctgcacaagctatttctctgcctggagaact-ccccctgag----ctctatgacttggtcccttcacccc-------------ATCACCT-----CCAACCACTGTAGCTAGAA-CCCCCAGTTATTCCCTG--TACCCCTTGTCCTTCATAACCCCT-------------CATCACCtccatat-tttcctattagcagatgagccctgagggcggaga i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 4739 349 + 138250 tctgctcaaaaccttcagctcttccctaggtcaatccaaataaaattctgtgtttacggtggcctcagggt---------------cacctcttacctgtgtcctcatct-ctacagtcctccctggctcactctcatgccggctgcctggatgttctgttctacatgtcaatcacatgcaaccccagggcctttgcacaagctctttctctgcctggagaacc----cccaaa----ctctgtgacccagtctctttaccct-------------gtcatct-----ccaacCATT-TAGCTGGAA-CTCCCAGTTACTCCCTGTATACACCTCGACCTT---AACCCCT-------------TGGACACTCCATAT-TTTCCTGTT---AGATGAGTCTTGAGGGCAGAGT i calJac3.chr22_GL285922_random C 0 I 8 s canFam3.chr1 20061186 401 - 122678785 tctggtcaaaatctccagtggttccccatctcgtcccaagtaaaatctgaagtttacaatggcctaagggccttttgtgaaatggctccctcttatctgtgacctcatctcttacaaccctccctggttcactctcaagctggctgtcttgatat--tgttttacatgataatcctccatgacctcaggacctttgcataagctatttctctgcctgaggaactcctactccagatctctctatggttcattctcttcacccctgaggtcttcatattgacctataggtcaactattgtagtgagcatcccccaatt----------ctccttttgcctttcatgacccttattggatatggcacaccacatatatctgtttcctattagcacatgagctcagagggaagaga i canFam3.chr1 I 3553 C 0 e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=1314.000000 s hg38.chr19_GL949747v2_alt 642109 1 + 729520 C s panTro4.chr19 59911427 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842001 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351708 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3536801 1 - 59248254 c i macFas5.chr19 I 67842 C 0 s calJac3.chr22_GL285922_random 5096 1 + 138250 T i calJac3.chr22_GL285922_random I 8 C 0 s canFam3.chr1 20061587 1 - 122678785 c i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e rheMac3.chr19 60647113 21 + 64156825 I a score=5407.000000 s hg38.chr19_GL949747v2_alt 642110 11 + 729520 Gtt----------ttgtttgt s panTro4.chr19 59911428 11 + 63644993 Gtt----------ttgtttgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842002 11 + 60714840 Gtt----------ttgttggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351709 21 - 106955855 tttgttgttgttgttgttgtt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3536802 11 - 59248254 gtt----------ttatgtat i macFas5.chr19 C 0 I 3 s calJac3.chr22_GL285922_random 5097 11 + 138250 GTT----------TTGTTTTT i calJac3.chr22_GL285922_random C 0 I 57 e canFam3.chr1 20061588 0 - 122678785 C e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e rheMac3.chr19 60647113 21 + 64156825 I a score=129168.000000 s hg38.chr19_GL949747v2_alt 642121 93 + 729520 ttttt--gagaccggagtctcactct-gtcacccaggctggagtgcaatggcgcgatctcggctcactgcaacctccgcctcctgggttcaagcga s panTro4.chr19 59911439 94 + 63644993 ttttt-tgagaccggagtctcactct-gtcacccaggctggagtgcaatggcgccatctcggctcactgcaacctccgcctcctgggttcaagcga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842013 93 + 60714840 ttttt--gagactggagtcccactct-gtcacccagactggagtgcagtggcgcgatctcggctcactgcaacctccgcctcctgggttcaagcga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351730 94 - 106955855 tttttttgagact-gagtctcactct-gtcacccaggctggagtgcaatggcgtgatctcggctcactgcaacctctgcctcccgggttcaagcaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3536816 92 - 59248254 tttat--gaga-tggagtttcactct-gttgcccaggctggagtgcagtggcatgatcttcactcactgcaacctctgcctcccaggctccagtga i macFas5.chr19 I 3 C 0 s papAnu2.chr19 3474716 92 - 51301725 tttat--gaga-tggagtttcactct-gttgcccagcctggagtgcagtggcacgatcttcgctcactgcaatctctgcctcccaggctccagtga i papAnu2.chr19 I 6558 C 0 s calJac3.chr22_GL285922_random 5165 93 + 138250 ttttt--gaga-cagagtttccttccggttgcccaggctggagtgcaatgacacaatcactgctcactgcaaactccagctcccgggttcaagcga i calJac3.chr22_GL285922_random I 57 C 0 e canFam3.chr1 20061588 0 - 122678785 C e chlSab2.chr6 47601756 146 + 50890351 I e rheMac3.chr19 60647113 21 + 64156825 I a score=16475.000000 s hg38.chr19_GL949747v2_alt 642214 12 + 729520 ttctcctgcccc s panTro4.chr19 59911533 12 + 63644993 ttgtcctgcccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842106 12 + 60714840 ttctcctgcccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351824 9 - 106955855 tt---ctgcctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3536908 12 - 59248254 ttcttgtgcctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3474808 12 - 51301725 ttcttgtgcctc i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 5258 12 + 138250 ttctcctgcttc i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20061588 12 - 122678785 ttctcttgttcc i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47601756 146 + 50890351 I e rheMac3.chr19 60647113 21 + 64156825 I a score=93418.000000 s hg38.chr19_GL949747v2_alt 642226 108 + 729520 agcctcctgagtagctgggattacaggtgcctgtcaccacgcccagctaacttctgtatatttagtagagacacggttttaccatgtta----ggttggtcttgaactcctt s panTro4.chr19 59911545 108 + 63644993 agcctcctgagtagctgggactacaggtgcctgtcaccatgcccagctaacttttgtatatttagtagagacacggttttaccatgtta----ggttggtcttgaactcctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842118 107 + 60714840 agcctcctgagtagctgggactacaggtgcctgtcaccatgcccggctaacttttgtatttttagtagagacagggttttaccatgtta----ggctggtcttgaactcc-t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351833 107 - 106955855 agccttccgagtagctgggattacaggtgcccgccaccacgcccagctaacttttgtacttttagtagagacagggttttaaggtgtta----ggctggtcttgaactcc-t i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3536920 103 - 59248254 accttcccaagtagctggcattaaaggcactcaccaccatgtgtggctaatt--------ttttgtagagacggggtttcaccatgttggcctggctggtctcaaactcc-t i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3474820 103 - 51301725 accttcccaagtagctggcattaaaggcactcaccaccatgcgtggctaatt--------ttttgtagagatggggtttcaccatgttggcctggctggtctcaaactcc-t i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 5270 42 + 138250 agcctcccaaatagctgggactgtaggcacacaccaccacgc---------------------------------------------------------------------- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20061600 0 - 122678785 C e chlSab2.chr6 47601756 146 + 50890351 I e rheMac3.chr19 60647113 21 + 64156825 I a score=10904.000000 s hg38.chr19_GL949747v2_alt 642334 8 + 729520 gacctcag s panTro4.chr19 59911653 8 + 63644993 gacctcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842225 8 + 60714840 gacctcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351940 8 - 106955855 gacctcag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60647134 7 + 64156825 gacctca- i rheMac3.chr19 I 21 C 0 s macFas5.chr19 3537023 8 - 59248254 gaactcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3474923 8 - 51301725 gaactcag i papAnu2.chr19 C 0 n 0 e canFam3.chr1 20061600 0 - 122678785 C e calJac3.chr22_GL285922_random 5312 0 + 138250 C e chlSab2.chr6 47601756 146 + 50890351 I a score=1314.000000 s hg38.chr19_GL949747v2_alt 642342 1 + 729520 g s panTro4.chr19 59911661 1 + 63644993 g i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842233 1 + 60714840 g i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351948 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3537031 1 - 59248254 g i macFas5.chr19 C 0 n 0 s papAnu2.chr19 47894218 1 + 51301725 g i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601902 1 + 50890351 g i chlSab2.chr6 I 146 C 0 e canFam3.chr1 20061600 0 - 122678785 C e calJac3.chr22_GL285922_random 5312 0 + 138250 C e rheMac3.chr19 60647141 0 + 64156825 C a score=189574.000000 s hg38.chr19_GL949747v2_alt 642343 71 + 729520 tgatccatccacctcggcctcccaaagtgctgggattacaggcgtgaaccaccgtgcccggccTGAGACTT s panTro4.chr19 59911662 71 + 63644993 tgatccatccacctcggcctcccaaagtgctgggattacaggcgtgaaccagcgtgccctgccTGAGACTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842234 71 + 60714840 tgatccatccacctcggcctcccaaagtgctgggattacaggcgtgaaccactgtgcccggccTGAGACTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351949 71 - 106955855 tgatccatccaccttggcctcccaaagtgctgggattacaggcgtgagcccccgcgcccagcctgagactt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60647141 71 + 64156825 tgatccgcccacctgggcctccaaaagtgctgggattacaggcgtgagccaccgcgcccggccTGAGACTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55788169 71 + 59248254 tgatccgcccacctgggcctccaaaagtgctgggattacaggcgtgagccaccgcgcccggccTGAGACTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47894219 71 + 51301725 tgatccgcccacctgggcctcccaaagtgctgggattacaggcatgagccaccgcgcccggcctaagactT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601903 71 + 50890351 tgatccacccgtcttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccTGAGACTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 5312 51 + 138250 ------------------ctcccaaagtgctgaga-cacaggcctgagccactgcgcccggcc-GAGACTT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20061600 0 - 122678785 C a score=1168560.000000 s hg38.chr19_GL949747v2_alt 642414 362 + 729520 C---TGTTGGTCATGCAGATCCCCAACACACGAGGGTGGGCTTGGCTTGCCGGAGGGCATCGATCAGCACTGGCTGCATTAACGTGTTGATTTCTGTGTTTCCCC---AGGTTGTGGGGATGTTCCATCCCTCCGTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCGTCACTCTGGACCTGGGTCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTGAAACCTTGACATGTTCCAGTGGCACCCTCCGGACACTCAGGTATGATCCATTTACTTCCCCATCAGGCTTTCTCCAGAGTGGTAGGTTT--AGGGGAAGCATAATGACATGGACCTGCTGTAGGAGA------CT s panTro4.chr19 59911733 362 + 63644993 C---TGTTGGTCATGCAGATCCCCAACACACGAGGGTGGGCTTGGCTTACCGGAGGGCATCGATCAGCACTGGCTGCATTAACGTGTTGATTTCTGTGTTTCCCC---AGGTTGTGGGGATGTTCCATCCCTCCGTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCGTCACTCTGGACCTGGGTCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTGAAACCTTGACATGTTCCAGTGGCACCCTCCGGACACTCAGGTATGATCCATTTACTTCCCCATCAGGCTTTCTCCAGGGTGGTAGGTTT--AGGGGAAGCATAATGACATGGACCTGCTGTAGGAGA------CT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842305 361 + 60714840 C---TGTTGGTCATGCAGATCCCCAACACCCGAGGGTGGGCTTGGCTTACAGGAGGGCATCGATCAGCACTGGCTGCATTAACATGTTGATTTCTGTGTTT-CCC---AGGTTGTGGGGATGTTCCATCCCTCTGTTCAGTTGTGAAGACCTCTGTTCTGCCCTCAGCTGCAACCAGAGCCTCGTCACTCTGGACCTGGGTCAGAATCCCTTGGGTTCTAGTGGAGTGAAGATGCTGTTTGAAACCTTGACACATCCCAATGGCACCCTCCGGACACTCAGGTATGATCCATTTACTTCCCCATCAGGCTTTCTCCAGAGTGGTAGGTTT--AGGGGAAGCATAATGACATGGACCTGCTGTAGAAGA------CT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103352020 355 - 106955855 c---tgttggtcatacagatccccaacacccgagggggggcttggcttataggagggcatcgatcagcaccggccgaattaacgTGTTGATTTCTGTGTTTCCCC---AGGTTGTGGGGATGTTCCATCCCTCCGTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCGTCACTCTGGACCTGGGTCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTGAAACCTTGACACGTCCCAATGGCACCCTTCAGACACTCAGGT-------GTTTACTTCCCCATCAGGCTTTCTCCAGAGTGGCAGGTTT--AGGGGAAGCATAATGACATGGACCTGCTGTAGGAGA------CT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60647212 359 + 64156825 G---TGTTGGTCATGCAGGTCCCCAAGCCCCGAGGCTGTGCTTGGCTTATGGGAGGGCATCGATCAGCACCAGCTGAATCAACGTGCTCATTTCTGTGTTTCCTC---AGGTTGTGGGGGTGTTCCATCCCTCCCTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCATCACTCTGGACCTGGGCCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTAAAACCTTGACACGTCC---TGGCACCCTCCAGACACTCCGGTATGATCTATTTACTTCCCCATCAGGCTTCCTCCGGGGTGGTAGGTTT--AGGGGAAACATAATGACGTGGACCTGCTGTAGGAGA------CT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55788240 359 + 59248254 G---TGTTGGTCATGCAGGTCCCCAAGCCCCGAGGCTGTGCTTGGCTTATGGGAGGGCATCGATCAGCACCAGCTGAATCAACGTGCTCATTTCTGTGTTTCCTC---AGGTTGTGGGGATGTTCCATCCCTCCCTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCATCACTCTGGACCTGGGCCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTAAAACCTTGACACGTCC---TGGCACCCTCCAGACACTCCGGTATGATCTATTTACTTCCCCATCAGGCTTCCTCCGGGGTGGTAGGTTT--AGGGGAAACATAATGACGTGGACCTGCTGTAGGAGA------CT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47894290 365 + 51301725 G---TGTTGGTCATGCAGGTCCCCAAGCCCCGAGGCTGTGCTTGGCTTATGGGAGGGCATCGATCAGCACCAGCTGAATCAACGTGCTCAGTTCTGTGTTTCCTC---AGGTTGTGGGGATGTTCCATCCCTCCCTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCATCACTCTGGACCTGGGCCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTCAAACCTTGACACGTCC---TGGCACCCTCCAGACACTCCGGTATGATCCATTTACTTCCCCGTCAGGCTTCCTCCGGGGTGGTAGGTTT--AGGGGAAACATAATGACGTGGACCTGCTGTAGGAGACTGATCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601974 362 + 50890351 GTGTTGTTGGTCATGCAGGTCCCCAAGCCCCGAGGCTGTGCTTGGCTTATGGGAGGGCATCGATCGGCACCAGCTGAATCAGCGTGCTCATTTCTGTGTTTCCTC---AGGCTGTGGGGATGTTCTATCCCTCCCTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCATCACTCTGGACCTGGGCCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTAAAACCTTGACACGTCC---TGGCACCCTCCAGACACTCCGGTATGATCTATTTACTTCCCCATCAGGCTTTCTCCGGGGTGGTAGGTTT--AGGGGAAACATAATGACGTGGACCTGCTGTAGGAGA------CT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 5363 361 + 138250 C---TGTTGCTCATGCAGATCCCCAACACCCAAGGGTGCACCTGACTCACAGGAGGGTGCCGGTCAGCACTGGCTGAACAAACGTGTTGATTTCTGCCTTTCCCC---AGGTTGTGGGGATGTTCCATCCCTCCGGCCAGCTGTGAGAACCTCTGCTGTGTCCTCAGCTGCAACCAGACCCTCATCACTCTGGACCTGGGCCAGAATTCCTTGGGGTATAGTGGAGTAAAGTTGCTGTTTGAAACCTTGACACGTCCAAATGGCACCCTCCAGACACTCAGGTACGATCCACGTACTCCCCC-TCAGGTATTCTCCGGGGTAGTAGGTTT--AGGGGAAGCATAATCACAGGAATCTGCCGTAGGAGA------CT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20061600 353 - 122678785 c---tgttg--------gatacccaacacccaggcgtatgtctggcatataggatggtatcagtaaacattggttgaatga-----CCTAATTTTGTGTCTCCCCTATAGGTTGTGGGGATGTGCCATCACTCCTTTCAGCTCTGAAATCCTCTCATCTGCCCTTGGCAGAAATCAGAGCCTGGTCACACTGGACCTGGGCCAGAATTCCTTGGGGTATAGTGGAATAAAGATGCTGTGTGATACCTTGAAACTTCACTGTTCCTCCCTCCGGACACTCAGGTATGATCCTCCTGCTGTTCAGT-GTTTTTCCTCCATGATGGTAGGTTTGCAAGGGGAGCACAAACCACAGGAATTGTTGTAGGCAA------CT i canFam3.chr1 C 0 I 757 a score=18278.000000 s hg38.chr19_GL949747v2_alt 642776 6 + 729520 GATCTG s panTro4.chr19 59912095 6 + 63644993 GATCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842666 6 + 60714840 GATCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103352375 6 - 106955855 GATCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60647571 6 + 64156825 GATCCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55788599 6 + 59248254 GATCCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47894655 6 + 51301725 GATccg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47602336 6 + 50890351 GATCCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 5724 6 + 138250 GATCCG i calJac3.chr22_GL285922_random C 0 I 456 e canFam3.chr1 20061953 757 - 122678785 I a score=1822264.000000 s hg38.chr19_GL949747v2_alt 642782 733 + 729520 gtagctgg-attacaggttcccgccatcacacccagccaatttctgtatttcacttggagaaacggggtttcaccatgttggtcaggctggtctcaaactcctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagcaaccgcacccggccACC-tttttttttttttt--------cctttgaggcaagaactcactatgt-tccccaggctggagtccagcagcacaatgatggctcgctgcaggctcgctccagctcctgggctcaagcaa---tcctgcctcagttcctgagtaggtaggtttataagcatgaaccattgcacccagcCACGGCTGC-CGTCTACCTGCTCATGATAGCCATTTGTCACTGGGCTGTGTTTTGTTTGTTGCATTTTGTCAGGGTTTTGGGGTTTTGTTTTGtttt--------ttctttctttttttttttttttttctgagatggagtctcactctgttgcccaggctggggtgcagtggt-------------tgctaactgcaacctccacctcccaggttccagctattctcatgcttcagcctcccaagtagctgggattacaggcatgcaccaccacacctaggtaatttttgtatttttagtagagacagggttttgccatgttggccagggtggtctcaaactcctgacctc-cgtgatttgcccacctcagcatcccaaagtgctgggattacaggcatgag--ccaccgcaccc s panTro4.chr19 59912101 705 + 63644993 gtagctgg-attacaggttcccgccatcacacccagccaatttctgtatttcacttggagaaacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagcaactgcacccggccACCttttttttttttttt--------cctttgaggcaagaactcactatgt-tccccaggctggagtccagcagcacaatgatggctcgctgcaggcttgctccagctcctgggctcaagcaatcctcctgcctcagttcctgagtaggtaggtttataagcatgaaccattgcacccagcCATGGCTGC-TGTCTACCTGCTCATGACAGCCAGTTGTCACTGGGCTGT-------------------------GTTTTGGGGTTTTGttttgtttt--------ttc-------ttttttttttttttctgagatggagtctcactctgttgcccaggctggggtgcagtggt-------------tgctaactgcaacctccacctcccaggttccagctattctcatgcctcagcctcccaagtagctgggattacaggcatgcaccaccacacctaggtaatttttgtatttttagtagagacagggttttgccatgttggccagggtggtctcaaactcctgacctc-ggtgatttgcccacctcagcatcccaaagtgctgggattacaggcatgag--ccaccgcaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842672 740 + 60714840 gtagctgg-attacaggttcccgccaccagacccagccaatttctgtatttta---gtagagacggggtttcaccatgttggtcaggctggtctcaaactcctgacctcagatgatcca-ctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcacccggccACCttttttttttttttttttttttacctttgaggcaagaactcactgtat-tccccaggct-gagtccagcagtacaatgatggctcgctgcaggctcgctccagctcctgggctcaagcaatcctcctgcctcagttcctgagtaactaggtttataagcatgaaccattgcacccagccaCGGCTGC-TGTCTGCCTGCTCATGAGAGCAAGTTGTCACTGGGCTGTGTTTTGTTTGTTGCATTTTGTCAGGGTTTTTGGGGTTCGTttttttgt--------ttt--ttgttttttgttttgttttctgagatggagtctcactctgttgcccaggctggagtgcagtggt-------------tgctaactgcaacttccacctcccaggttcaagctattctcatgcctcagcctcccaagtagctgggattacaggcatgcaccaccacacctaggtaatttttgtatttttagtagagacagggttttgccatgttggccagggtgatctcgaacttttgacctc-ggtgatttgcccacctcagcgtcccaaagtgctgggattacaggcatgagccccaccgcaccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103352381 730 - 106955855 gtagctgg-attacaggttcccgccaccacacccagccaatttctgtatttt--tagtagagacggggtttcaccatgttggtcaggctggtctcaaactcctgacctcaggtgatccgcctgcctcagcctcccaaagtgctgggattacaggcatgagctaccgtacccagcc-----------Ctttatt--------tcttcgaggcaagaactcactatgt-tccccaggctggagtccagcagcacaatgatggctcgctgcaggctagctccagctcctgggctcaagcaatccttctgcctccgttcctgagta-ctaggtttataagcatgagccattgca-ccAGCCACGGCTGC-TGTGTACCTGCTCATGAGAGCCAGTTGTCACTGGGCTGCgttttgtttgttgcattttatcagggttttggggttttgttttgttttgcttttcctttttttttttttttttttttttcctgagatggagtctcactctgttgcccaggctgggttgcaatggt-------------tgctaactgcaacctccacctcccaggttcaagctattctcatgcttcagcctcccaagtagctgggattacaggcatgcaccaccacacccagctaatttttgtatttttagtagagacagggttttgccatgttggccagggtgctctcgaactcttgagctt-ggtgatttgcccacctcagcgtcccaaagtgctgggattataggcatgag--tcactgcaccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60647577 710 + 64156825 gtagctggaattacaggttcccgccaccacacccagctaa-ttctgtatttt--tagtagagacgggctttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccgcctcggtctcccaaagtgctgggattacaggcgtgaaccgctgcacccagcc---------Ctttttttt--------ccttggaggcaagaactcactctgt-tccccaggctggagtccagcagcacagtgatggctc-----------actccagttcctgggctcaagcaatcctcctacctcagttcctgagtagccaggtttgtaagcatgaaccattgcacccagccaTGGCTGCTTGTCTACCTGCTCACGAGAGCCAGTTGTCATTGGATTGTGTTTTGTTTGTTGGGTTTTGTTGGGGTTTTGG-gttttgttttgtttt----------------------gttttgttttctgagatggagtctcgctctgttgcccaggctggggtatagtggt---gtagtatctcagctaactgcaacctccgcctcccaggttcaggctattctcatgcctcagcctcccatgtagctgggattacaggcatacaccaccacacatagctaatttttgtatctttagtagagaca-ggttttgccgtgttggccagggtggtctcaaactcctgacctt-ggtggttcacccacctcagcatcccaaagtgctaggattacaggcatgag--ccaccgcaccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55788605 710 + 59248254 gtagctggaattacaggttcccgccaccacacccagctaa-ttctgtatttt--tagtagagacgggctttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccgcctcggtctcccaaagtgctgggattacaggcgtgaaccgctgcacccagcc---------Ctttttttt--------ccttggaggcaagaactcactctgt-tccccaggctggagtccagcagcacagtgatggctc-----------actccagttcctgggctcaagcaatcctcctacctcagtttctgagtagccaggtttgtaagcatgaaccattgcacccagccaTGGCTGCTTGTCTGCCTGCTCACGAGAGCCAGTTGTCATTGGATTGTGTTTTGTTTGTTGGGTTTTGTTGGGGTTTTGG-gttttgttttgtttt----------------------gttttgttttCtgagatggagtctcgctctgttgcccaggctggggtatagtggt---gtagtatctcagctaactgcaacctccgcctcccaggttcaggctattctcatgcctcagcctcccatgtagctgggattacaggcatacaccaccacacatagctaatttttgtatctttagtagagaca-ggttttgccgtgttggccagggtggtctcaaactcctgacctt-ggtggttcacccacctcagcatcccaaaatgctaggattacaggcatgag--ccaccgcaccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47894661 702 + 51301725 gtagctggaattacaggttcccgccaccacacccagctaa-ttctgtatttt--tagtagagatgggctttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccgcccgcctcggtctcccaaagtgctgggattacaggcgtgaaccgctgcacccagcc---------c-ttttttt--------ccTTGGAGGCAAGaactcactctgt-tccccaggctggagtccagcagCACAGTGATGGCTC-----------ACcccagttcctgggctcaagcaatcctcctacctcagttccTGAGTAGCCAGGTTTGTAAAcatgaaccattgcacccagccatgGCTGCTTGTCTACCTGCTCGCGAGAGCCAgttgtcattggattgtgttttgtttgttgggttttgttggggttttgg-----------gtttt----------------------gttttgttttctgagatggagtctcgctctgttgcccaggctggggtatggTGGTGTAGTAgtatctcagctaactgcaacctccgcctcccaggttcaggctattctcatgcctcagcctcccatgtagctgggattacaggcatacaccaccacacatagctaatttttgtatctttagtagagaca-ggttttgccgtgttggccagggtggtcttgaactcctgacctt-ggtggttcacccacctcagcatcccaaagtgctaggattacaggcatgag--ccaccgcaccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47602342 705 + 50890351 gtagctggaattacaggttcccgccaccacacccagctaa-ttctgtatttt--tagtagagacgggctttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccgcctcggtctcccaaagtgctgggattacaggcgtgaaccgctgtacccagcc---------Ctttttttt--------ccttggaggcaagaactcactgtgt-tccccaggctggagtccagcagaacaatgatggctc-----------actccagttcctgggctcaagcaatcctcctacctcagctcctgagtagctaggcttgtaagcatgagccattggacccagccaTGGCTGCTTGTCTACCTGCTCACGAGAGCCAGTTGTCATTGGATTGTGTTTTGTTTGCTGGGTTTTGTTGGGGTTTTGG------Gttttgtttt----------------------gttttgttttctgagatggagtctcgctctgttgcccgggctggggtatagtggt---gtagtatctcagctaactgcaacctccgcctcccaggttcaggctattctcatgcctcagcctcccatgtagctgggattacaggcatacaccaccacacatagctaatttttgtatctttagtagagaca-ggttttgccgtgttggccagggtggtctcgaactcctgacctt-ggtggttcacccacctcagcatcccaaagtgctaggattacaggcgtgag--ccactgcaccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 6186 686 + 138250 gtagctgggattacaggtggctgccaccacgcctggctgatttctgtatttt--tagtagagacagggttttaacatgttggctaggctgatctcgaactcctgacctcaggtgatctacctgtttcagcctcccaaagtgctgggattataggtgttagccaccatgaccagcc---------Cttttttgt--------tttttgaggcaagaactcactatgtccccccaggctggagtcgagcagcacgacgacagttcgctgcaggctcaccccacctcctgggctcaagccgtcctcctgcctcactcccggagtagctaggtttac---catgagccatggcacccagccaTGGCTGC-TGTCTATCTGCTCATGAGAGCCAGTTGTCACTGGGTTGTGTTTT-TTTGTTTGATTTTTTTGGTGGGGTGGGGA--------GGCtt----------------------------------gagaaggagcgttgctctgttgcccaggctggagtgcagtggt---gtgat-----atctaactgcaacccctgcctcccagg---------ttctcgtgcctcagccccccaagtaggtgggattacaggcataagccatcaaatccagctaatttttgtatttttagtagagacggggttttgccatgttggccagcctggtcttcaaatgctgacctcaggtaatccacctgccttggcctgccaaagtgctgggattacaggcatcag--ccaccacacc- i calJac3.chr22_GL285922_random I 456 C 0 e canFam3.chr1 20061953 757 - 122678785 I a score=40910.000000 s hg38.chr19_GL949747v2_alt 643515 15 + 729520 ggccTGAGTTGTATT- s panTro4.chr19 59912806 15 + 63644993 ggccTGAGTTGTATT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843412 15 + 60714840 ggccTGAGTTGTATT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103353111 15 - 106955855 ggcctgagttgtatt- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60648287 15 + 64156825 agccTGAGTTGTATT- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55789315 15 + 59248254 agccTGAGTTGTATT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895363 15 + 51301725 agcctgagttGTATT- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47603047 15 + 50890351 agccTGAGCTGTATT- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 6872 9 + 138250 ------AGCtatatt- i calJac3.chr22_GL285922_random C 0 I 893 s canFam3.chr1 20062710 16 - 122678785 GACCTGTGTTGTCTAC i canFam3.chr1 I 757 C 0 a score=481332.000000 s hg38.chr19_GL949747v2_alt 643530 218 + 729520 TTGATACCATGGCATCAAAGAACCAAGAAGCCCCTTCCTAGGAATGTGGGAACTT-------------------------------CAGAAATTCTCACAAGCAATATACTCTACTGCTGGCTTAAAATAATCTTTATGTAGAAGAAACATAGATTACTTGTTTATTTAACATGAAACTCAGCCTAAGATACTTTGTAAGTCAAAAGACATATGGACACTAAGGGTTTTTTTAAGCTTTAA-----gtttgtt--t s panTro4.chr19 59912821 218 + 63644993 TTGATACCATGGCATCAAAGAACCAAGAAGCCCCTTCCTAGGAGTGTGGGAACTT-------------------------------CAGAAATTCTCACAAGCAATATACTCTACTGCTGGCTTAAAATAATCTTTATGTAGAAGAAACATAGATTACTTGTTTATTTAACATGAAACTCAGCCTAAGATACTTTGTAAGTCAAAAGACATATGGACACTAAGGGTTTTTTTAAGCTTTAA-----Gtttgtt--t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843427 218 + 60714840 TTGATACCATGGCATCAAAGAACCAAGAAGCCCCTTCCTAGGAGTGTGGGAACTT-------------------------------CAGAAATTCTCACAAGCAATATACTCTACTGCTGGCTTAAAATAATCTTTATGTAGAAGAAACATAGATTACTTGTTTATTTAACATGAATCTCAGCCTAAGATACTTTGTAAGTCAAAAGACATATAGACACTAAGGTTTTTTTTAAGCTTTAA-----Gtttatc--t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103353126 212 - 106955855 TCGATACCATGGCGTCAAAGAACCAAGAAGCCCCTTCCTAGGAGTGTGGGAACTT------------------------------CCAGAAATTCTCACAAGCAATATACTCTACTGCTGGCTCAAAATAATCTTTATGTAGAAGAAAC--AGATTACTTGTTTATTTAACACAAATCTCAGCCTAAGATACTTTGTAAGTCAAAAGACATATGGACACTAAGGGTTTTTTTAAGCTTTAA-----Gtt------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60648302 213 + 64156825 TCAATACCATGGC----AAGAACCAAG-AGCCCCTTCCTAGAAGTATGGGAACTT------------------------------CCAGAAATTCTCACAAGCAATATAGTCTACTGCTGGCTTAAAATAATCTTTATGTAGAAGAAACATAGATTACTTATTTACTTAACATGAAACTGAGCTTAAGATACTTTGCAAGTCAAAAGACATATGGATGTTAAGGG-CTTTTTAAGCTTTGA-----Gtttattt-- i rheMac3.chr19 C 0 I 10 s macFas5.chr19 55789330 212 + 59248254 TCAATACCATGGC----AAGAACCAAG-AGCCCCTTCCTAGAAGTGTGGGAACTT------------------------------CCAGAAATTCTCACAAGCAATATAGTCTACTGCTGGCTTAAAATAATCTTTATGTAGAAGAAACATAGATTACTTATTTACTTAACATGAAACTGAGCTTAAGATACTTTGCAAGTCAAAAGACATATGGACGTTAAGGG-CTTTTTAAGCTTTGA-----Gtttatt--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895378 212 + 51301725 TCAATACCATGGC----AAGAACCAAG-AGCCCCTTCCTAGAAGTGTGGGAACTT------------------------------CCAGAAATTCTCACAAGCAATATAGTCTACTGCTGgcttaaaataatctttatgtaGAAGAAACATAGATTACTTATTTACTTAACATGAAACTGAGCTTAAGATACTTTGCAAGTCAAAAGACATATGGACGTTAAGGG-CTTTTTCagctttga-----gtttatt--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47603062 217 + 50890351 TCAATACCATGGCGTCAAAGAACCAAG-ATCCCCTTCCTAGAAGTTTGGGAACTT------------------------------CCAGAAATTCTCACAAGCAATACAATCTACTGCTGGCTTAAAATAATCTTTATGTAGAAGAAACATAGATTACTTGTTTACTTAACACGAATCTCAGCCTAAGATACTTTGCAAGTCAAAAGACATCTGGACGTTAAGGG-CTTTTTAAGCTTTGA-----Gtttatt-t- i chlSab2.chr6 C 0 I 10 s canFam3.chr1 20062726 218 - 122678785 TTGCTACCATGGCAACAAAGAACAGTA-CAACTTTTCTTGGTCTTACCCAAGCTTGTTTAAATACTCAGATGCAAAAACAAACAAAAAGAAATACTCAGATGCAATGTAGACAACCAATGGCTTGAAATGATAATTATGTAGAAGGAAC--AGATTATATATGTACTCAAC---------------AGGTAGCTTGCTAGTCAAAAG-------------AAGGG-ATTTATAGACTCTGACATTTGTTT------ i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 6881 893 + 138250 I a score=3689.000000 s hg38.chr19_GL949747v2_alt 643748 9 + 729520 gtttgttta s panTro4.chr19 59913039 9 + 63644993 gtttgttta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843645 9 + 60714840 atctattta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103353338 4 - 106955855 -----ttta i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 20062944 9 - 122678785 CTGTGTTTA i canFam3.chr1 C 0 I 1205 e calJac3.chr22_GL285922_random 6881 893 + 138250 I e chlSab2.chr6 47603279 10 + 50890351 I e papAnu2.chr19 47895590 0 + 51301725 C e macFas5.chr19 55789542 0 + 59248254 C e rheMac3.chr19 60648515 10 + 64156825 I a score=5543.000000 s hg38.chr19_GL949747v2_alt 643757 20 + 729520 ttta-----ttatttatttTGGAGA s panTro4.chr19 59913048 25 + 63644993 tttatttatttatttattttggaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843654 20 + 60714840 ttta----tttattta-tttggaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103353342 20 - 106955855 ttta----tttatgtt-tttggaga i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55789542 9 + 59248254 ----------------ttttggaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895590 9 + 51301725 ----------------ttttggaga i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20062953 1205 - 122678785 I e calJac3.chr22_GL285922_random 6881 893 + 138250 I e chlSab2.chr6 47603279 10 + 50890351 I e rheMac3.chr19 60648515 10 + 64156825 I a score=637.000000 s hg38.chr19_GL949747v2_alt 643777 13 + 729520 C--AGTTTTACTCTT s nomLeu3.chr10 103353362 15 - 106955855 cagagttttgctctt i nomLeu3.chr10 C 0 I 1521 e canFam3.chr1 20062953 1205 - 122678785 I e ponAbe2.chr19 56843674 0 + 60714840 C e calJac3.chr22_GL285922_random 6881 893 + 138250 I e chlSab2.chr6 47603279 10 + 50890351 I e papAnu2.chr19 47895599 0 + 51301725 C e macFas5.chr19 55789551 0 + 59248254 C e rheMac3.chr19 60648515 10 + 64156825 I e panTro4.chr19 59913073 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949747v2_alt 643790 580 + 729520 TTTTTTGGGGTGCATCttttttcttttttttttttttttttcctttttttttttttttttttttattgatcattcttgggtgtttctcacagagggggatttggcagggtcataggacaatagtggagggaaggtcagcagataaacaagtgaacaaaggtctctggttttcctaggcagaggaccctgcggccttccgcagcgtttgtgtccctgggtacttgagattagggagtggtgatgactcttaacgagcgtgctgccttcaggatctgtttaacaaagcatatcttgcaccgcccttaatccgtttaactctgagtggacacagcacatgtttcagagagcacggggttgggggtaaggtcacagatcaacaggatcccaaggcagaagaatttttcttagtacagaacaaaatggggggctgacccccccacctccctcccggacagggcggctggccggttagaggggctcctcacttcccattaggggcggccgggcagaggcgcccctcacctcccggacagggcggctggctgggcggggggctgacccccccacctccccGCCCGGC e canFam3.chr1 20062953 1205 - 122678785 I e ponAbe2.chr19 56843674 0 + 60714840 C e calJac3.chr22_GL285922_random 6881 893 + 138250 I e nomLeu3.chr10 103353377 1521 - 106955855 I e chlSab2.chr6 47603279 10 + 50890351 I e papAnu2.chr19 47895599 0 + 51301725 C e macFas5.chr19 55789551 0 + 59248254 C e rheMac3.chr19 60648515 10 + 64156825 I e panTro4.chr19 59913073 0 + 63644993 C a score=1187.000000 s hg38.chr19_GL949747v2_alt 644370 2 + 729520 ca s panTro4.chr19 59913073 2 + 63644993 ca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843674 2 + 60714840 ca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55789551 2 + 59248254 cg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895599 2 + 51301725 cg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20062953 1205 - 122678785 I e calJac3.chr22_GL285922_random 6881 893 + 138250 I e nomLeu3.chr10 103353377 1521 - 106955855 I e chlSab2.chr6 47603279 10 + 50890351 I e rheMac3.chr19 60648515 10 + 64156825 I a score=484265.000000 s hg38.chr19_GL949747v2_alt 644372 276 + 729520 gagttttactcttgttgtccagcctggagcgcaatggcgctatctcggcttactgcaacctccgcctcccgggttcaagaggttctcctccctcagcctcccaagtagctgggactacaggcatgtgccaccacacctggctaatcttgtatttttaatagagaca--gggtttctccatattggtcaggctggtctcgaactcctgacttcaggtgacccgcctgcctcagcctcccaaa-gtgctaagattacaggcgtgagccaccatgcctggcc s panTro4.chr19 59913075 275 + 63644993 gagttttactcttgttgcccagcctgg-gcgcaatggcgctatctcggctcactgcaacctccgcctcccgggttcaagaggttcttctccctcagcctcccaagtagctgggactacaggcatgtgccaccacacctggctaatcttgtatttttagtagagaca--gggtttctccatattggtcaggctggtctcgaactcctgacttcaggtgacccgcctgcctcagcctcccaaa-gtgctaagattacagccatgagccgccatgcctggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843676 278 + 60714840 gagttttactcttgttgcccagcctggagtgcaatggcgctatctcggctcactgcaacctctgcctcccggattcaagaggttctcctccctcagcctcccaagtagctgggactacaggcatgtgccaccacacctggctaattctgtatttttagtagagacacggggtttctccatattggtcaggctggtctcgaactcctgacttcaggtgacctgcctgcctcagcctcccaaa-gtgctaagattacaggcatgagccaccacgcctggcc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60648525 275 + 64156825 gagttttgctcttgttgcccagcctggagtgcaatggtgctatctcagctcactgcaacctccgcctcccgggttcaagcagttctcctccctcagcctcccatgtagctgggattacaggcatctg-taccacgtctggctcattttgtatctgtagtagagacg--gggttgctccctgttggtcaggctggtctcgaactcccgacttcaggtgacccgcctgcctcagcctcccaaa-gtgctgggcttacaggcgtgagccaccgcgcctggcc i rheMac3.chr19 I 10 C 0 s macFas5.chr19 55789553 275 + 59248254 gagttttgctcttgttgcccagcctggagtgcaatggtgctatctcagctcactgcaacctccgcctcccgggttcaagcagttctcctccctcagcctcccaagtagctgggattacaggcatgtg-taccacgtctggctcattttgtatttttagtagagacg--gggttgctccctgttggtcaggctggtctcgaactcccgacttcaggtgacccgcctgcctcagcctcccaaa-gtgctgggattacaggcgtgagccaccgcgcctggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895601 275 + 51301725 gagttttgctcttgttgcccagcctggagtgcaatggtgctatctcagctcactgcaacctccgcctcccgggttcaagcagttctcctccctcagcctcccaagtagctgggactacaggcatgtg-taccacgtctggctcattttgtatttttagtagagacg--gggttgctccctgttggtcaggctggtctcgaactcccgactgcaggtgacccgcctgcctcagcctcccaaa-gtgctgggattacaggcgtgagccaccacgcctggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47603289 276 + 50890351 gagttttgctcctgttgcccagcctggagtgcaatggtgctatctcagctcactgcaacctccgcctcccgggttcaagcagttctcctccctcagcctcccaagtagctgggatcacacgcatgtg-taccatgtctggctcattttgtatttttagtagagaca--gggttgctccatgttggtcaggctggtcttgaactcctgacttcaggtgacccgcctgcctcggcctcccaaaggtgctgggattacaggcatgagccaccgtgcctggcc i chlSab2.chr6 I 10 C 0 e canFam3.chr1 20062953 1205 - 122678785 I e calJac3.chr22_GL285922_random 6881 893 + 138250 I e nomLeu3.chr10 103353377 1521 - 106955855 I a score=57447.000000 s hg38.chr19_GL949747v2_alt 644648 25 + 729520 TGCATCTCCTCTGTTTAAC-TGGTAC s panTro4.chr19 59913350 25 + 63644993 TGCATCTCCTCTGTTTAAC-TGGTAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843954 25 + 60714840 TGCATCTCCTCTGTTTAAC-TGGTAC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60648800 26 + 64156825 TGCATCTCCTCTGTTTAACCTGGTAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55789828 26 + 59248254 TGCATCTCCTCTGTTTAACCTGGTAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895876 26 + 51301725 tgcatcTCCTCTGTTTAACCTGGTAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47603565 26 + 50890351 TGCATCTCCTCTGTTTAACTTGGTAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 7774 25 + 138250 TGCATCTCCTCTGTTGAAC-TGGTAC i calJac3.chr22_GL285922_random I 893 C 0 e canFam3.chr1 20062953 1205 - 122678785 I e nomLeu3.chr10 103353377 1521 - 106955855 I a score=427888.000000 s hg38.chr19_GL949747v2_alt 644673 183 + 729520 TCCGGGGTCCACTGAGTAGAAGTTGCCAAAGTGGGTGATAGAGCGGGTAAGCAGGTATTAGAGCTATAGCCCAGCTGTACTCAGCAATTCCAT-TTTCTGTGTATGATAATCAACAAGCATCTCAAACTGCACAATGGCTATATACCATTACAAGGTTAACCTGATGTTATGTTTTTCTCTATC s panTro4.chr19 59913375 183 + 63644993 TCCGGGGTCCACCGAGTAGAAGTTGCCAAAGTGGGTGATAGAGCGGGTAGGCAGGTATTAGAGCTATAGCCCAGCTGTACTCAGCAATTCCAT-TTTCTGTGTATGATAATCAACAAGCATCTCAAACTACACAATGGCTATATACCATTACAAGGTTAACCTGATGTTATGTTTTTCTCTATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843979 183 + 60714840 TCCGGGGTCCACCGAGTAGAAGTTGCCAAAGTGGGTGATAGAGCAGGTAGGCAGGTATTAGAGCTATAGCCCAGCTGTATTCAGCAATTTCAT-TTTCTGTGTATGATAATCAACAAGCATCTAAAACTACACAGTGGCTTTATACCATTACAAGGTTAATCTGATGTTATGTTTTTCTCTATC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60648826 180 + 64156825 TCTTGGGTCCACTGAGTAGAAGTTGCCAAAGTGGGTGATGGAGCAGGTAGGCAGGTATTAGAGCTACAGCCCAGCCACACTCAGCAATTGCAT-TTTCTGTGCATGATA---AACAAGAATCTAAAAATACACAGTGGCTTGATACCATTACAAGGTTAACCTGATGTTATGTTTTTCTCTATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55789854 180 + 59248254 TCTTGGGTCCACTGAGTAGAAGTTGCCAAAGTGGGTGATGGAGCAGGTAGGCAGGTATTAGAGCTACAGCCCAGCCACACTCAGCAATTGCAT-TTTCTGTGCATGATA---AACAAGAATCTAAAAATACACAGTGGCTTGATACCATTACAAGGTTAACCTGATGTTATGTTTTTCTCTATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895902 180 + 51301725 TCTTGGGTCCACTGAGTAGAAGTTGCCAAAGTGGGTGATGGAGCAGGTAGGCAGGTATTAGAGCTATAGCCCAGCCACACTCAGCAATTGCAT-TTTCTGTGCATGATA---AACAAGAATCTAAAAATACACAGTGGCTTGATACCATTACAAGGTTAACCTGATGTTATGTTTTTCTCTATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47603591 179 + 50890351 TCTTGGGTCCACTGACTAGAAGTTGCCAAAGTGGGTGATGGAGCAGGTAGGCAGGTATTAGAGCTACAGCCCAGCCGCACTCAGCAATT-CAT-TTTCTGTGCGTGATA---AACAAGAATCTAAAAATACACAGTGGCTTGATACCACTACAAGGTTAACCTGATGTTATGTTTTTCTCTATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 7799 179 + 138250 TCCTGGGTCTCCCAAGTAGAAGTTGCCAAGGTGGGTGATGGAGCAGGTAGGCAGGTATTGGCGCTGTAGCCCAGCCGTACCCCGCAATTCCA--TTCCTCTGAATGATCATCAGCAAGCATCTAAAACTGCACAGTGGCTTTACACCATGACAGGGTTAATC---TGCTATCTTCTCCTCTATC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20064158 175 - 122678785 TCCTGGGTCCACGAAATAGAAGTTACCAAAGTGAGCTGTGTA----GTAGGCAGGTATTAGAATTAAATCCTGGATGTATCAATCAATTCCATCTCTCCAAACATGATA---CGAGATCACCCAAGATCATTCAACCATGCAAAAGCATTACAACATTAACCTGGTAT--TCTCTTTCCCTACC i canFam3.chr1 I 1205 C 0 e nomLeu3.chr10 103353377 1521 - 106955855 I a score=90709.000000 s hg38.chr19_GL949747v2_alt 644856 44 + 729520 A---GATCAACATGGTTGAGAATA-------AGAGGAATG-AAAAAAAGGATTAA s panTro4.chr19 59913558 47 + 63644993 ATCAGATCAACATGGTTGAGAATA-------AGAGGAATG-AAAAAAAGGATTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56844162 47 + 60714840 ATCAGATCAACATGGTTGAGAATA-------AGAGGAATG-AAAAAAAGGATTAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60649006 42 + 64156825 A---GATCAACATGGTTGAGAATA---------AGGAATG-AAAAAAAGGATTAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55790034 44 + 59248254 A---GATCAACATGGTTGAGAATA-------AGAGGAATG-AAAAAAAGGATTAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47896082 44 + 51301725 A---GATCAACATGGTTGAGAATA-------AGAGGAATG-aaaaaaaggattaa i papAnu2.chr19 C 0 I 984 s chlSab2.chr6 47603770 44 + 50890351 A---GATCAACATGGTTGAGAATA-------AGAGGAATGAAAAAAAAGGATTA- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 7978 51 + 138250 A---GATCAACATGGCTGGGAACAAGAAGAAAGAGGAATG-AACAAAAGGATTAA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20064333 0 - 122678785 C e nomLeu3.chr10 103353377 1521 - 106955855 I a score=436022.000000 s hg38.chr19_GL949747v2_alt 644900 291 + 729520 AAAGAGAAATGAAAGTCTTTAATATTACAttttattatttacttcatttattttttagacaaaaatctcactctattgctcagg-ctggagtgcaggggcccgatctcagctcactgtaacctccgcctcccaggttcaagtgattctcctgtgtcagcttcctgagtagctgggattatagggatgcaccatcacacccaactaacttttatattttta-gta-----gagatggac-tttcac-catcttgcctaggctgg-------------------------------tctcaaactcctgacctcaagtgatctgcccacctca s panTro4.chr19 59913605 291 + 63644993 AAAGAGAAATGAAAGTCTTTAATTTTACAttttattatttacttcatttattttttagacaaaaatctcactctattgctcagg-ctggagtgcaggggcccgatctcagctcactgtaatctccgcctcccaggttcaagtgattctcctgtgtcagcttcctgagtagctgggattatagggacgcaccatcacacccaactaacttttatattttta-gta-----gagatggac-tttcac-catcttgcctaggctgg-------------------------------tctcaaactcctgacctcaagtgatctgcccacctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56844209 292 + 60714840 AAAGAGAAATGAAAGTCTTTAATTTTACAttttattatttacttcatttattttttagacaaaaatctcactctattgctcagg-ctggagtacaggggcccggtctcggctcactgtaacctccacctcccaggttcaagtgattctcctgtgttagccccctgagtagctgggactatagggacgcaccatcatacccagctaacttttatattttta-gta-----gagatggacttttcac-catcttgcctaggctgg-------------------------------tctcaaactcctgacttcaagtggtctgcccacctcA i ponAbe2.chr19 C 0 M 764 s rheMac3.chr19 60649048 282 + 64156825 AAAGAGAAATGAAAGTCTTTAATTTTACAttttatt---------atttatttttgagacaaaaatctcactctgttgctcagg-ctggagtgcagtggcccgatctcggctcactgtaacatccacctcccaggttcaagtgattcttctgtctcagcctcctaagtagctgggactataggcatgcaccatcacacccagctaacttttatattttta-gta-----gagatggac-tttcac-catcttgcctaggctgg-------------------------------tctcaaactcctgacctcaagtgatctgcccacctca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55790078 282 + 59248254 AAAGAGAAATGAAAGTCTTTAATTTTACAttttatt---------atttatttttgagacaaaaatctcactctgttgctcagg-ctggagtgcagtggcccgatctcggctcactgtaacatccacctcccaggttcaagtgattcttctgtctcagcctcctaagtagctgggactataggcatgcaccatcacacccagctaacttttatattttta-gta-----gagatggac-tttcac-catcttgcctaggctgg-------------------------------tctcaaactcctgacctcaagtgatctgcccccctca i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47603814 276 + 50890351 AAAGAGAAATGAAAGTCTTTAATTTTGCAtttta-------------ttatttttgagacaaaaatctcactctgttgctcagg-ctggagtgcagtagcccgatctcggctcactgtaacatccacttcccaggttcaggtgattctcctgtctcagcctcctgagtagctgggactataggcacgtaccatcacacccagctaac--ttatattttta-gta-----gagatggac-attcac-catcttgcctaggctgg-------------------------------tctcaaactcctgacctcaagtgatctgcccacctca i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 8029 312 + 138250 AAAGGGAAATGAAAGTCTTTAAttgt--------tt---------atttatttctgagac-aagatctcattctgttgctcaggcctggagtgcagtggcctgatcttggctcactataacctctgcctcccagactgaagtgattctcctgcctcagcctcctgagtagctgcggctataggtgtgtacctccacacccagctaacttttatatatatatatatttatgagacggag-tttcactcttgttacccaggctggagtgcaatggcacgatctcggttcaccgcaacctccgccttctgggttcaagcagttctcctgcctca i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20064333 0 - 122678785 C e nomLeu3.chr10 103353377 1521 - 106955855 I e papAnu2.chr19 47896126 984 + 51301725 I a score=60030.000000 s hg38.chr19_GL949747v2_alt 645191 60 + 729520 ctctcccaaagtgctggcattacaggcatgacccaccacatctggccTCATTTTATATTT s panTro4.chr19 59913896 60 + 63644993 ctctcccaaagtgctggcattacaggcatgacccaccacatctggccTCattttatattt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60649330 60 + 64156825 ctctctcaaagtgctggcattataggcatgacccaccacatctggccTCattttatattt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55790360 60 + 59248254 ctctctcaaagtgctggcattataggcatgacccaccacatctggccTCATTTTATATTT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47604090 57 + 50890351 ctctctcaaagtgctcgcattataggc---acccaccacatctggccTCATTTTATATTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 8341 60 + 138250 gcctcctgagtagctgggattacaggcacgtgccaccatgcccagcgaatttttgtgttt i calJac3.chr22_GL285922_random C 0 I 1056 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M e nomLeu3.chr10 103353377 1521 - 106955855 I e papAnu2.chr19 47896126 984 + 51301725 I a score=174713.000000 s hg38.chr19_GL949747v2_alt 645251 209 + 729520 AAAAATAAAAAATAAGCAAATCAAGCCAGGTAcagtttaggcaacatggtaaaaccccaactctactaaaaatacaaaaattagctgagcatggtggcaggtgcctgtagtcccagctactcgggaggcagaggataggatggcttgaacccaagaggcacaggttgcagtgagctgagatggtaccactgcactccagcttgggcaac s panTro4.chr19 59913956 209 + 63644993 aaaaataaaaaataaGCAAATCAAGCCAGGTAcagtttaggcaacatggtaaaaccccaactctactaaaaatacaaaaattagctgagcatggtggcaggtgcctgtagtcccagctactcgggaggcagaggataggatggcttgaacccaagaggcacaggttgcagtgagctgagatggtaccactgcactccagcctgggcaac i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60649390 204 + 64156825 aaaaat---aaataaGC-AATCAGGCCAGGTGCGgtctgggcaacgtggtaaaaccccaactctattaaaaatac-aaaattagctgagcatggtggcaggcgcctgtagtcccagctactcaggaggcagaggataggatggcttgaaccctagaggcacaggttgcagtgagctgaggtggtgccactgcactctatcctgggcgac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55790420 204 + 59248254 AAAAAT---AAATAAGC-AATCAGGCCAGGTGCGgtctgggcaacgtggtaaaaccccaactctattaaaaatac-aaaattagctgagcatggtggcaggcgcctgtagtcccagctactcaggaggcagaggataggatggcttgaaccctagaggcacaggttgcagtgagctgagatggtgccactgcactctatcctgggcaac i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47604147 204 + 50890351 AAAAAT---AAATAAGC-AATCAGGCCAGGTGCGgtctgggcaacatggtaaaaccccaactctattaaaaatac-aaaattagctgagcatggtggcaggcgcctgtagtcccagctactcaggaggcagaggataggatggcttgaaccctagaggcacaggttgcagtgagctgagatggtgccactgcactctatcctgggcaac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M e calJac3.chr22_GL285922_random 8401 1056 + 138250 I e nomLeu3.chr10 103353377 1521 - 106955855 I e papAnu2.chr19 47896126 984 + 51301725 I a score=1692.000000 s hg38.chr19_GL949747v2_alt 645460 3 + 729520 aga s panTro4.chr19 59914165 3 + 63644993 aga i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60649594 3 + 64156825 aga i rheMac3.chr19 C 0 I 7 s chlSab2.chr6 47604351 3 + 50890351 aga i chlSab2.chr6 C 0 I 7 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M e calJac3.chr22_GL285922_random 8401 1056 + 138250 I e nomLeu3.chr10 103353377 1521 - 106955855 I e papAnu2.chr19 47896126 984 + 51301725 I e macFas5.chr19 55790624 0 + 59248254 C a score=26406.000000 s hg38.chr19_GL949747v2_alt 645463 319 + 729520 gagactgtctttttttttttttttttttttttttttttttttttttttGAGAtcgcccaggctggagtacagtggcacgatctcggctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcctgagtagctgggactacaggcgtccgccaccacgcccggctaattttttgtatttttttagtagagacagggtttcaccgtgttagccaggatggtcttgatctgctgacctcgtgatccacccgcctcagcctcctaaagtgctgggaattacaggcgtgagccatcacgccccacctg s panTro4.chr19 59914168 298 + 63644993 gagactgtcttttttttttttttttttt--------------------gagatcgcccaggctggagtacagtggcacgatctcggctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcctgagtagctgggactacaggcgtccgccaccacgcccggctaattttttgtatttttttagtagagacagggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgcctcagcctcctaaagtgctggga-ttacaggcatgagccatcacgcctcacctg i panTro4.chr19 C 0 C 0 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M e calJac3.chr22_GL285922_random 8401 1056 + 138250 I e nomLeu3.chr10 103353377 1521 - 106955855 I e chlSab2.chr6 47604354 7 + 50890351 I e papAnu2.chr19 47896126 984 + 51301725 I e macFas5.chr19 55790624 0 + 59248254 C e rheMac3.chr19 60649597 7 + 64156825 I a score=6095.000000 s hg38.chr19_GL949747v2_alt 645782 12 + 729520 agactgtctttt s panTro4.chr19 59914466 12 + 63644993 agactgtcttta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103354898 12 - 106955855 agactgtcttta i nomLeu3.chr10 I 1521 C 0 s macFas5.chr19 55790624 10 + 59248254 agactgtctc-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47897110 10 + 51301725 agactgtctc-- i papAnu2.chr19 I 984 C 0 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M e calJac3.chr22_GL285922_random 8401 1056 + 138250 I e chlSab2.chr6 47604354 7 + 50890351 I e rheMac3.chr19 60649597 7 + 64156825 I a score=1092.000000 s hg38.chr19_GL949747v2_alt 645794 2 + 729520 aa s panTro4.chr19 59914478 2 + 63644993 aa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103354910 2 - 106955855 aa i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 9457 2 + 138250 aa i calJac3.chr22_GL285922_random I 1056 C 0 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M e chlSab2.chr6 47604354 7 + 50890351 I e papAnu2.chr19 47897120 0 + 51301725 C e macFas5.chr19 55790634 0 + 59248254 C e rheMac3.chr19 60649597 7 + 64156825 I a score=25602.000000 s hg38.chr19_GL949747v2_alt 645796 13 + 729520 aaaaaaaaaaaaa s panTro4.chr19 59914480 13 + 63644993 aaaaaaaaaaaga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103354912 11 - 106955855 aaaaaaaaaaa-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60649604 13 + 64156825 aaagaaaaaaaga i rheMac3.chr19 I 7 C 0 s macFas5.chr19 55790634 13 + 59248254 aaagaaaaaaaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47897120 13 + 51301725 aaagaaaaaaaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47604361 13 + 50890351 aaagaaaaaaaga i chlSab2.chr6 I 7 C 0 s calJac3.chr22_GL285922_random 9459 13 + 138250 aaaaaaaaaaaaa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M a score=101607.000000 s hg38.chr19_GL949747v2_alt 645809 39 + 729520 aa--------aTCAATGTGGAACACTCC-TTTGCCACCTAGAATAATC s panTro4.chr19 59914493 47 + 63644993 aagaaagaaaaTCAATGTGGAACACTCC-TTTGCCACCTAGAATAATC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103354923 38 - 106955855 ----------aTCAATGTGGAACACTCCTTTTGCCACCTAGAATAATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60649617 39 + 64156825 aa--------aTCAATATGGAACACTCC-TTTGCCACGTAGAATAATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55790647 39 + 59248254 aa--------aTCAATATGGAACACTCC-TTTGCCACGTAGAATAATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47897133 39 + 51301725 aa--------atcaatatggAACACTCC-TTTGCCACCTAGAATAATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47604374 39 + 50890351 aa--------aTCAATATGGAACACTCC-TTTGCCACCTAGAATAATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 9472 39 + 138250 aa--------aTCAATATGGAATGCTCC-TTTGCCACACAGAATAATC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20064333 39 - 122678785 AA--------ATCAATATGGAACCCTGA-TTTGCAGCATACAGTAATC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56844501 764 + 60714840 M a score=1563064.000000 s hg38.chr19_GL949747v2_alt 645848 531 + 729520 AGGAAAGGTGACCCATGCCCTGTGCCTCCT---------TAACAGAC-TTTCAGGTACTTGGGAATTTGAAACAAATCTCCTTGATGCACAAAGTAACCTTTTCTTCCCCCATTGT-ACCCCAGGTTGAAAATCGATGACTTTAATGATGAACTCAATAAGCTGCTGGAAGAAATAGAAGAAAAAAACCCACAACTGATTATTGATACTGAGAAACATCATCCCTGGGCAGAAAGGCCTTCTTCTCATGACTTCATGATCTGAAT-CCCCCCGAGTCATTCATTCTCCA-TGAAGTCATCGATTTTCCAGGTGTTGGTGAACTGCCTGTGACTCCTCTCCTCCCCGGCCCCTACCCCTCAGGGATAATGAGTTCATTGCTGGGCTAGATGT---TTTAGCCATGATTCTGCCTCTGTTTTAT-----ACCTGCACACATC-----CTTATCTTTGTTACATATGAAATATCTGTATCACGGGTATATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTGTTACTTAATAATGGGCTTTGACAAGTTAGAG s panTro4.chr19 59914540 531 + 63644993 AGGAAAGGTGACCCATGCCCTGTGCCTCCT---------TAACAGAA-TTTCAGGTACTTGGGAATTTGAAACAAATCTCCTTGATGCACAAAGTAACCTTTTCTTCCCCCATTGT-ACCCCAGGTTGAAAATAGATGACTTTAATGATGAACTCAATAAGCTGCTGGAAGAAATAGAAGAAAAAAACCCACAACTGATTATTGATACTGAGAAACATCATCCCTGGGAAGAAAGGCCTTCTTCTCATGACTTCATGATCTGAAT-CCCCCTGAGTCATTCATTCTCCA-TGAAGTCATCGATTTTCCAGGTGTTGGTGAACTGCCTGTGACTCCTCTCCTCCCCCGCCCCTACCCCTCAGGGATAATGAGTTCATTGCTGGGCTAGATGT---TTTAGCCATGATTCTGCCTCTGTTTTAC-----ACCTGCACACGTC-----CTTATCTTTGTTACATATGAAATATCTGTATCACGGGTATATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTGTTACTTAATAATGGGCTTTGACAAGTTAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845265 530 + 60714840 AGGAAAGGTGACCCATGCCCTGTGCCTCCT---------TAACAGAC-TTTCAGGTCCTTGGGAATTTGAAACAAATCTCCTTCATGCACAAAGTAACCTTTTCTTCCCCCATTGT-ACCCCAGGTTGAAAATAGATGACTTTAATGATGAACTCAATAAGCTGCTGGAAGAAATAGAAGAAAAAAACCCACAACTGATTATCGATACTGAGAAACATGATCCCTGGAAAAAAAGGCCTTCTTCTCATGACTTCGTGATCTGAATCCCCCCCGAGTCATTCATTCTCCA-TGAAGTCATCGATTTTCCAGGTGTTGGTGAACTGCCTGTGACTC--CTCCTCCCCCGCCCCCACTCCTCGGGGATAATGAGTTCATTGCTGGGCTAGATGT---TTTAGCCATGATTCTGCCTCTGTTTTAC-----ACGTGCACACGTC-----CTTATCTTTGTTACATATGAAATATCTGTATCACGGGTATATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTGTTACTTAATAATAGGCTTTGACAAGTTAGAG i ponAbe2.chr19 M 764 C 0 s nomLeu3.chr10 103354961 522 - 106955855 AGGAAAGGTGACCCATGCCCTGTGCCTCCT---------TAACAGAC-TTTCAGGTACTTGGGAATTTGAAACAAATCTCCTTGATGCACAAAGTAACCTTTTCTTCCCCCATTGT-ACCCCAGGTTGAAAATAGATAACTTTAATGATGAACTCGATAAGCTGCTGGAAGAAATAGAAGAAAACAACCCACAACTGATTATTGATACTGAGAAACATGATCCCTGGAAAAAAAGGCCTTCTTCTCATGACTTCATGATCTGAATCCCCCCTGAGTCATTCATTCTCCG-TGAAGTCATCGATTTTCCAGGTGTTGGTGAACTGCTGGTGACTC--CTCCTCCCCCGCCCCCACTCCTCAGGGATCATGAGTTCATTGCTGGGCTAGGTGT---TTTAGCCATGATTCTGCCTCTGTTTGAC-----ACGTGCACACGTC----------CTTTGTTACATATGAAATATCTGTATCACGGGTATATTGAGAGAAATAAAGGTGAGA--GCAATCACAAGTGAAGCTGTTACT---TAATGGGCTTTGACAAGTTAGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60649656 514 + 64156825 AGGAAAGGTGA----------------CCT---------CAACAGAA-TTTCAGGTACTTGGGAATTTGAA--AAATCTTCTTGATACACAAAGTAACCTTTTCCTCCCCCATTGT-ACCCCAGGTTGAAAATAGATGACTTTAATGATGAACTTGATAAGCTGCTGGAAGAAATAGAAGAAAACAACCCACAACTGATTATTGATACTGAGAAACATGATCCCTGGAAAAAAAGACCTTCTTCTCATGACTTCATGATCTGAATCCCCCCAGAGTCGTTCATTCTCCA-TGAAGTCGTTGATTTTCCAGGTGTTGGTGAACTGCCTGTGACTCCTCTTCTCCCCCGCCCCCACTCCTCAGGGATAATGAGCTCACTGCTAGGCTAGATGT---TTCAGCCATGGTTCTGCCTCTGTTTTAC-----ACGTGCACACGTC-----CTTAACTTTGTTACATATGAAATATCTGTATCACGGGTACATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTGTTACTTAATAATGGACTTTGACACGTTAGAG i rheMac3.chr19 C 0 I 305 s macFas5.chr19 55790686 514 + 59248254 AGGAAAGGTGA----------------CCT---------CAACAGAA-TTTCAGGTACTTGGGAATTTGAA--AAATCTTCTTGATAAACAAAGTAACCTTTTCCTCCCCCATTGT-ACCCCAGGTTGAAAATAGATGACTTTAATGATGAACTCCATAAGCTGCTGGAAGAAATAGAAGAAAACAACCCACAACTGATTATTGATACTGAGAAACATGATCCCTGGAAAAAAAGACCTTCTTCTCATGACTTCATGATCTGAATCCCCCCAGAGTCGTTCATTCTGCA-TGAAGTCGTTGATTTTCCAGGTGTTGGTGAACTGCCTGTGACTCCTCTTCTCCCCCGCCCCCACTCCTCAGGGATAATGAGCTCACTGCTAGGCTAGATGT---TTCAGCCATGGTTCTGCCTCTGTTTTAC-----ACGTGCACACGTC-----CTTAACTTTGTTACATATGAAATATCTGTATCACGGGTACATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTGTTACTTAATAATGGACTTTGACACTTTAGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47897172 510 + 51301725 AGGAAAGGTGA----------------CCT---------CAACAGAATTTTCAGGTACTTGGGAATTTGAA--AAATCTTCTTGATACACAAAGTAACCTTTTCCTCCCTCATTGT-ACCCCAGGTTGAAAATAGATGACTTTAATGATGAACTCCATAAGCTGctggaagaaatagaagaaaacaacccACAACTGATTATTGATACTGAGAAACATGATCCCCGGaaaaaaaGACCTTCTGCTCATGACTTCATGATCTGAATCCCCCC-GAGTCGTTCATTCTCCA-TGAAGTCgttgattttccaggtgttggtGAACTGCCTGTGACTCCTCTTCTCCCCCGCCCCCACTCCTCAGGGATAATGAGTTCACTGCTAAGCTAGATGT---TTCAGCCATGGTTCTACCTCTGTTTTAC-----ACGTGCACACGTC-----CTTAACTTTGTTACATATGAAATATCTGTATCACTGGTACATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTG----TTAATAATGGACTTTGACACGTTAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47604413 511 + 50890351 AGGAAAGGTGA----------------CCT---------CAACAGAA-TTTCAGGTACTTGGGAATTTGAA--AAATCTTCTTGATACACAAAGTAACCTTTTCCTCCCGCATTGT-ACCCCAGGTTGAAAATAGATGACTTTAATGATGAACTCCATAAGCTGCTGGAAGAAATAGAAGAAAACAACCCACAACTGATTATTGATACTGAGAAACATGATCCCTGGAAAAAAAGACCTTCTTCTCATGACTTCATGATCTGAATCCCCCCAGAGTCATTCATTCTCCA-TGAA---GTTGATTTTCCAGGTGTTGGTGAACTGCCTGTGACTCCTCTTCTCCCCCACCCCCACTCCTCAGGGATAATGAGTTCACTGCTAGGCTAGATGT---TTCAGCCATGGTTCTGCCTCTGTTTTAC-----ACGTGCACACGTC-----CTTAACTTTGTTACATATGAAATATCTGTATCACGGGTACATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTGTTACTTAATAATGGGTTTTCACAAGTTAGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 9511 514 + 138250 AGGAAAGGTGAGCCATGCTCTGTG---CCT---------------------------CTTGGAACTTTGAAACAAGTCTCCTTGACACAAAAAGTAACCTTTTCTTCCCCCATTGT-ACCCCAGGTTGAAAGTAGATGACTTTACTGATGAACTCGATACGCTGCTGACTGAGATAGAAGACAGCAACCCGCAGCTGACTATTGATACCGAGAGTCAAGAGCCCTGGAAGAAAAGGCCTTCTTCTCGCTACTTCACCGTCTGAATCCCCCCAGAGTCCTTCATTCTCAG-GGAAGACAAGCATTTCCCAGGTGTTGGTGAACTGCCTGCGACTC--CCCCCACCCTGCCCCCTCTCCTCGGGGA-AAGGAGCTGGTTGCTGGGCCAGGTGT---TTTAGCCGCGGTTCTGCCTCTGGTTCACGTAGAACCTGCATACGTC-----CTTGACCTTGTTACGTATGAAACGTCTGTATCACGGGTGTGTGGAGGGAAATAAAGGTGAGA--GCATTCGCAGATGAAGCTGTTACATAGTAATGGGCTGTGACCAGTTAGAG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20064372 521 - 122678785 AGTAAATATTGCCCCTGCC--------CCTGCTCTAAAGTATGAGAC-TTGCAGGCACTTGGGCATTTGGAATGAATCTCCTTGAAGCAACAAGAAACCTTCCTTTGTCCCATTGTAACTCCAGGTTGAAGATAGATGAATCTGATCCTCGAATCCAGAAGCTGCTAAAAGAAATCCAAGAATATGACCCACAACTGACCATCGAGAGTGATGACCAAGATCCAACCAATAACCGGCCTTCTTCACATGACTTCATTTTCTGAAT-CCCCTGGACTTATTCCTTCCCAAGTAAAATCCAGGATCATCAACATGATGTTGAACTTCCTCTGAGCC--------------------CTCTCAGTGAT-----GTTATGTGCTGGGCCAGATGTTACTGTATCCCTGGTTGTGCCTTCAGCTTCTATGAAACATGCACAGGTGGTTTACTTACCCCTATTATGGACAGAATGCCTATATCTTGAGTCTATCAAGAGCAATAAAGGTGTGAATGCATTCATGAAGGAGATTCT---TTATTAATGGATTCTGACCAAACATAG i canFam3.chr1 C 0 C 0 a score=17443.000000 s hg38.chr19_GL949747v2_alt 646379 6 + 729520 --AAAAGA- s panTro4.chr19 59915071 6 + 63644993 --AAAAGA- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845795 6 + 60714840 --AAAAGA- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355483 6 - 106955855 --AGAAGA- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60650475 6 + 64156825 --aaaaGA- i rheMac3.chr19 I 305 C 0 s macFas5.chr19 55791200 6 + 59248254 --AAAAGA- i macFas5.chr19 C 0 I 317 s papAnu2.chr19 47897682 6 + 51301725 --AAAAga- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47604924 6 + 50890351 --AAAAGA- i chlSab2.chr6 C 0 I 304 s calJac3.chr22_GL285922_random 10025 6 + 138250 --AAAAGA- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20064893 9 - 122678785 ACAGAAAAA i canFam3.chr1 C 0 C 0 a score=7153.000000 s hg38.chr19_GL949747v2_alt 646385 3 + 729520 TAT s panTro4.chr19 59915077 3 + 63644993 TAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845801 3 + 60714840 TAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355489 3 - 106955855 TGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60650481 3 + 64156825 TAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55791523 3 + 59248254 TAT i macFas5.chr19 I 317 C 0 s papAnu2.chr19 47897688 3 + 51301725 tat i papAnu2.chr19 C 0 I 585 s calJac3.chr22_GL285922_random 10031 3 + 138250 TAC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20064902 3 - 122678785 TAC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47604930 304 + 50890351 I a score=210578.000000 s hg38.chr19_GL949747v2_alt 646388 96 + 729520 CTTA-CTGGGTAGAACCT----------GGGGGGTGGGGGAAG-TGACAGTGTTTAATTGCATTGATTTCTATTGCCTTGTCAATCTTTGCCTTGCCT---TGGTATTTCC s panTro4.chr19 59915080 96 + 63644993 CTTA-CTGGGTAGAACCT----------GGGGGGTGGGGGAAG-TGACAGTGTTTAATTGCATTGATTTCTATTGCCTTGTCAATCTTTGCCTTGCCT---TGGTATTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845804 96 + 60714840 CTTA-CTGGGGAGAACCT----------GGGGGGTGGGGGAAA-TGACAGTGTTTAATTGCATTCATTTCTATTCCCTTGTCAATCTTTGCCTTGCCT---TGGTATTTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355492 95 - 106955855 CTCA-TTGGGGAGAACCT-----------GGGGCTGGGGGAAG-TGACCATGTTTAATTGCGTTGATTTCTATTGCCTTGTCAATCTTTGTCTTGCTG---TGGTAttttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60650484 100 + 64156825 CTTA-CTGGGGAGAACCT----------GGGGGGTGGGGGAAGTTGACAGTGTTTAATTGCATTGATTTCTATTGCCTTGTCAATCTTTGCCTTGCCTTCTTGGTATTTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55791526 100 + 59248254 CTTA-CTGGGGAGAACCT----------GGGGGGTGGGGGAAGTTGACAGTGTTTAATTGCATTGATTTCTATTGCCTTGTCAATCTTTGCCTTGCCTTCTTGGTAtttcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898276 100 + 51301725 cTTA-CTGGGGAGAacct----------ggggggtgggggaagttgACAGTGTTTAATTGCATTGATTTCTATTGCCTTGTCAATCTTTGCCTTGCCTTCctggtatttcc i papAnu2.chr19 I 585 C 0 s calJac3.chr22_GL285922_random 10034 89 + 138250 CTTA-CTGGGGAGAACTT-----------GGGGGTGGGGGAGG--GACTGTGTTTAGTTGCATTGATTTCTGTCGCTTTGCCAGTCTTTGCCT--------TCGTAtttcc i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20064905 105 - 122678785 TTTATTTGGGGAGAACCTAACACAGAAGGAAAAACGGGGACAG--AAATGTTTGTGATCTCCTTGGTCTGT-TCACCTTGCCAGTCACTGCCCAGTTC---TGGCATTCCT i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47604930 304 + 50890351 I a score=2092.000000 s hg38.chr19_GL949747v2_alt 646484 20 + 729520 tttcttttttcttttctttt s panTro4.chr19 59915176 12 + 63644993 tttcttttttc--------t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845900 11 + 60714840 tttcttttttc--------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355587 20 - 106955855 tttcttttatctttcttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60650584 20 + 64156825 Tttttttttttttttttttt i rheMac3.chr19 C 0 I 166 s macFas5.chr19 55791626 6 + 59248254 tttttt-------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898376 5 + 51301725 ttttt--------------- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065010 0 - 122678785 C e calJac3.chr22_GL285922_random 10123 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I a score=53952.000000 s hg38.chr19_GL949747v2_alt 646504 45 + 729520 tttttttttttttttttagac---tgagtttcactctgttgcccacgc s panTro4.chr19 59915188 45 + 63644993 ttctttcttttttttttagac---tgagtttcactctgttgcccacgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845911 42 + 60714840 -tttttcttttttttttagac-----agtttcactctgttgcccatgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355607 43 - 106955855 tttttttttttttttATAAAAGAATGAGTTTCATTCTGTTGCC----- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55791632 46 + 59248254 ttttttctttttttttaagat--ttgaatttcactctgttgcccatgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898381 46 + 51301725 ttttttttttttttttaagat--ttgaatttcactctgttgcccatgc i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 10123 45 + 138250 tttttctttctttcttgagat---ggagctgcactctgttgcccaggc i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20065010 0 - 122678785 C e chlSab2.chr6 47604930 304 + 50890351 I e rheMac3.chr19 60650604 166 + 64156825 I a score=137868.000000 s hg38.chr19_GL949747v2_alt 646549 139 + 729520 tggagtacactggcacgatctcagcttactacaacctggcaggttcaagcgattctcctgtctcagcctcctgagtagctgggattacaagcatcccccaccacacccggctaaatttttttgt---atttttaatagagat s panTro4.chr19 59915233 139 + 63644993 tggagtacactggcacgatttcagcttactacaacctcccaggttcaagcgattctcctgtctcagcctcctgagtagctgggattacaagcatcccccaccacacccggctaaatttttttgt---atttttaatagagat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845953 139 + 60714840 tggagtacagtggcacgatctcagcttactacaacctctcaggttcaagcgattctcctgtctcagcctcctgagtagctgggattacaggcatccctcaccacacccagctaaatttttttgt---atttttagtagagat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355650 94 - 106955855 ---------------------------------------------caagcgattctcctgtttcagcctcatgagtagctgcgattacaggcatcccccaccacacccggctaaatttttttct---atttttagtagagat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55791678 139 + 59248254 tggagtgcagtggcacgatctcagctcattacaacctcccaggttcaagcgatt---ctgtctcagcctcccgagtagctgggattacaggcattccccaccacacccagctaaattttttttttaaattcttagtacagat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898427 139 + 51301725 tggagtgcagtggcacgatctcagctcactacaacctcccaggttcaagtgatt---ctgtcttagcctcccgagtagctgggattacaggcattccccaccacacccagctaatttttttttttatattcttagtacagat i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065010 0 - 122678785 C e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I e rheMac3.chr19 60650604 166 + 64156825 I a score=374869.000000 s hg38.chr19_GL949747v2_alt 646688 242 + 729520 gaggtttcaccatgttggccagtctggtctcaaactcctgacctcaagtgatccacccacctcagcctcccagagtgctgggattacaggcatgagccactgtacccggctttttttttttt--ctttttctt--tttcctcaagcatgag-----------tgttgctc---tgttgcccaggctggaatacagcagcatgatgatagctcactgcagcctcaagctcccaggttcaagcgatcctccagcctcagcct s panTro4.chr19 59915372 233 + 63644993 gaggtttcaccatgttggccagtctggtctcaaactcctgacctcaagtgatccacccacctcagcctcccagagtgctgggattacaggcatgagccactgtacccggctttttttttt-----------tt--tttcctcaagcacgag-----------tgttgctc---tgttgcccaggctggaatacagcagcatgatgatagctcactgcagcctcaagctcccaggttcaagcgatcctccagcctcagcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56846092 243 + 60714840 gaggtttcaccatgttggccagtctggtcttaaactcctgacctcaagtgatccgtccacctcagcctcccagaatgctgggattaca-gcgtgagccactgcacccggctttttttttttttcctttttctt--tttcctcaagcatgag-----------tgttgctc---tgttgccctggctggaatacagcagcgtgatgatagctcgctgcagcctcaagctcccaggttcaagcgatcctccagcctcaacct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355744 243 - 106955855 gaggtttcaccatgtcggccaggctggtctcaaactcctgacctcaagtgatccgcccacctcagcctcccagaatgctgggattacaggcacgagccactgcacccggcttttttttt------------tt--tcccctcaagcatgagtgttgttgctctgttgctc---tgttgcccaggctggaatccagcagcatggttatagctcactgcagcctcaagcacccaggttccagcgatcctccagcctcaacct i nomLeu3.chr10 C 0 I 837 s rheMac3.chr19 60650770 235 + 64156825 gaggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccgcccacct-aaactcccagagtgctgggattataggcatgagccactgtacccagcctttttttttttt--------tt--cctcctcaagagtgag-----------tgttgctctgttgttgcccaggttggagtacaacagcacg---atagctcactgcagcctcaagcttgcaggttcaagtgatcctccagcctcaacct i rheMac3.chr19 I 166 C 0 s macFas5.chr19 55791817 235 + 59248254 gaggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccgcccacct-aaactcccagagtgctgggattataggcatgagccactgtacccagcctttttttttttt--------tt--tctcctcaagagtgag-----------tgttgctctgttgttgcccaggttggagtacaacagcacg---atagctcactgcagcctcgagctcgtaggttcaagtgatcctccagcctcaacct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898566 234 + 51301725 gaggtttcaccatgttgaccaggctggtctcaaactcctgacctcaagtgatccgcccacct-aaactcccagagtgctgggattataggcatgagccactgtacccggcccttttttttttc--------ttccccccctCAAGAgtgag-----------tgttgctc---tgttgcccaggttggagtacaacagcacg---atagctcactgcagcctcaagctcgcaggttcaagtgatgctccagcctcaacct i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065010 0 - 122678785 C e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I a score=236535.000000 s hg38.chr19_GL949747v2_alt 646930 196 + 729520 cctcagtagctgggactacaggtgcacaccaccaaaccaggccaatttttgtggga-----------ttttttttgaagacagggtctcactatgttgcccaggctgatctcaaactcccaggcgcaagtaatattcctgcctcagcctcccaaagtgctagga-ttacaggtgtgaaccactgtgcctagccTGTCTTGTTACTTGT s panTro4.chr19 59915605 195 + 63644993 cctcagtagctgggactacaggtgcacaccaccaaaccaggccaatttttgtggga------------tttttttgaagacagggtctcactatgttgcccaggctgatctcaaactcccaggcgcaagtaatattcctgcctcagcctcccaaagtgctagga-ttacaggtgtgaaccactgtgcctagccTGTCTTGTTACTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56846335 195 + 60714840 cctcagtagctgggactacaggtgcacaccaccaaaccaggccaatttttgtggga------------tttttttgaagacagggtctcactatgtcgcccaggctgatctcaaactcccaggctcaagtaatattcctgcctcagcctcccaaagtgctggga-ttacaggtgtgagccaGTGTGTCTAGTCTGTCTTGTTACTTCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60651005 207 + 64156825 cctcagtacctgtgactacagatgcacgccaccaaaccaggccagttcttggggttttttttttttcttttttttttgaacaggttctcactatgttgcccaggctggtctcaaactcccaggctcaagtaatattcctgcctcagcctcccaaagtgctggga-ttacaagtgtgagccactgtgcccagccTGCCTTGTTATTTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55792052 201 + 59248254 cctcagtagctgtgactacagatgcacgccaccaaaccaggccagttcttggggtttttt-------ttttttttcaagacagggtctcactatgttgcccaggctggtctcaaactcccaggctcaagtaatactcctgcctcagcctcccaaagtgctgggatttacaagtgtgagccactgtgcccagccTGCCTTGTTATTTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898800 199 + 51301725 cctcagtagctgtgactacagatgcacgccaccaaaCCAGGCCAgttcttggggttttt--------ttttttttgaagacagggtctcactatgttgcccaggctggtctcaaactcccaggctcaagtaatattcctgcctcagcctcccaaagtgctggga-ttacaagtgtgagccactgtgcccagcctgccttGTTATTTCT i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065010 0 - 122678785 C e calJac3.chr22_GL285922_random 10168 0 + 138250 C e nomLeu3.chr10 103355987 837 - 106955855 I e chlSab2.chr6 47604930 304 + 50890351 I a score=185509.000000 s hg38.chr19_GL949747v2_alt 647126 125 + 729520 TGACCTGCGTGGATCACTGCCTGCTGAGTATTACTTGCCAGAGGATTTCTCCTACCAA-TCTACAATA-----------TTTTAGGTGCTTCGGTGTAGCTCATATATGACCATGTCATTGCTCTGATTTTGCTTTT s panTro4.chr19 59915800 125 + 63644993 TGACCTGCGTGGATCACTGCCTGCTGAGTATTACTTGCCAGAGGATTTCTCCTACCAA-TCTACAATA-----------TTTTAGGTGCTTCGGTGTAGCTCATATATGACCATGTCATTGCTCTGATTTTGCTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56846530 125 + 60714840 TGACCTGCGTGGATCACTGCCTGCTGAGTATTACTTGCCAGAGGATTTCTCCTACCAA-CCTACAGTA-----------TTTTAGGTGCTTGAGTGTAGCTCATATATGACCATGTCATTGCTCTGATTTTGCTTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60651212 124 + 64156825 TGACCTGCATGGATCACTGCCTGTTGAGTGTTACTTGCCAGAGGATTTCTCCTACCAA-CATCCAATA-----------TTTTAGGTGCTTCAGTGTAGCTCATATACAACCATGTCATTGCTCTGA-TTTGCTTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55792253 124 + 59248254 TGACCTGCATGGATCACTGCCTGTTGAGTGTTACTTGCCAGAGGATTTCTCCTACCAA-CATCCAATA-----------TTTTAGGTGCTTCAGTGTAGCTCATATACGACCATGTCATTGCTCTGA-TTTGCTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898999 124 + 51301725 TGACCTGCATGGATCACTGCCTGTTGACTGTTACTTGCCAGAGGATTTCTCCTACCAA-CATACAATA-----------TTTTAGGTGCTTCAGTGTAGCTCATATACGACCATGTCATTGCtctga-tttgctttt i papAnu2.chr19 C 0 C 0 s canFam3.chr1 20065010 127 - 122678785 TGATCTGTGTGGGTAGCTGCCTGATGG----TCTTCTTCAGAGTATTTCTCCTACCAATCCTACAACAGTTTGTAGCATTCTTAAGTGCTTCAGTGAAGCCCATATATGA-----TCATTTCTTTGA-TCAACTTTT i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 10168 0 + 138250 C e nomLeu3.chr10 103355987 837 - 106955855 I e chlSab2.chr6 47604930 304 + 50890351 I a score=24787.000000 s hg38.chr19_GL949747v2_alt 647251 15 + 729520 TAAAAATTCTAACTT s panTro4.chr19 59915925 15 + 63644993 TAAAAATTCTAACTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56846655 15 + 60714840 TAAAAATTCTAACTT i ponAbe2.chr19 C 0 T 32152 s nomLeu3.chr10 103356824 9 - 106955855 taaaaatac------ i nomLeu3.chr10 I 837 C 0 s rheMac3.chr19 60651336 15 + 64156825 TAAAAATTCCAACTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55792377 15 + 59248254 TAAAAATTCCAACTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47899123 15 + 51301725 taaaaattccaactt i papAnu2.chr19 C 0 C 0 s canFam3.chr1 20065137 15 - 122678785 TAGTAATTCCAACCT i canFam3.chr1 C 0 I 1307 e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I a score=47356.000000 s hg38.chr19_GL949747v2_alt 647266 51 + 729520 AAAATAGAATCT------Cggccaggcacggtggctcacacctgtaatcccagc-act s panTro4.chr19 59915940 51 + 63644993 AAAATAGAATCT------Cggccaggcacggtggctcacacctgtaatcccagc-act i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103356833 50 - 106955855 aaaaaaaaa--t------tagctgggcgtggtggcgggcgcctgtagtcccagctact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60651351 57 + 64156825 AAAATAGAATCTTTTCTATTGCCAGGCACGGTGGCTTACATCTGTAATCGCAGC-act i rheMac3.chr19 C 0 I 864 s macFas5.chr19 55792392 57 + 59248254 AAAATAGAATCTTTTCTATTGCCAGGCACGGTGGCTTACATCTGTAATCACAGC-act i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47899138 57 + 51301725 AAAATAGAATCTTTTCtattgccaggcacggtggcttacatgtgtaatcgcagc-act i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I a score=8146.000000 s hg38.chr19_GL949747v2_alt 647317 16 + 729520 tcgggaggctgaggtg s panTro4.chr19 59915991 16 + 63644993 tcgggaggctgaggtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103356883 16 - 106955855 tggagaggctgaggca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55792449 14 + 59248254 --cctaagctcaggtg i macFas5.chr19 C 0 I 65 s papAnu2.chr19 47899195 16 + 51301725 ttgggaggctgaggtg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I e rheMac3.chr19 60651408 864 + 64156825 I a score=217037.000000 s hg38.chr19_GL949747v2_alt 647333 502 + 729520 ggtggat--cacgaagtcaggagttggaga------------------------------ccaacctggccaacgtggtgaaaccccgtctctactaaaaatataaaaaattagccaggcatggtggcacatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttaaacccaggaggtggatgttgcactgtgctgaagactgcactactgcattccagcttgggcaacagagtgactccttctcc-----aaaaaaaaacaaaaTCTCATGGTATGCATAGTTTTTCACTATAGAGTCTCCATTATTTCCTTGTGATACAGAATTCCAAATTCAACAAAGCAGCAGTGCAAGCTCTACGctgtaaaaccacaaacaaaacgaactgtactataaagacaacactagttggcaaagttgcttctcatggggagac-------tt--tgttgctgtctgtgtttactggatgagcaaacaaatggacggtAAGGGGGAAAAAGAACAGTACAAATTTTTATTAAACACT-----AATCATG s panTro4.chr19 59916007 507 + 63644993 ggtggat--cacgaagtcaggagttggaga------------------------------ccaacctggccaacgtggtgaaaccccgtctctactaaaaatataaaaaattagccaggcatggtggtacatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttaaacccaggaggtggatgttgcactgtgctgaagactgcactactgcattccagcttgggcaacagagtgactccttctccaaaaaaaaaaaaaaaaaaaTCTCATGGTATGCATAGTTTTTCACTATAGAGTCTCCAGTATTTCCTTGTGATACAGAATTCCAAATTCAACAAAGCAGCAGTGCAAGCTCTACGctgtaaaaccacaaacaaaacgaactgtactataaagacaacactagttggcaaagttgcttctcatggggagac-------tt--tgttgctgtctgtgtttactggatgagcaaacaaatggacggtAAGGGGGAAAAAGAACAGTACAAATTTTTATTAAACACT-----AATCGTG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103356899 533 - 106955855 ggagaatggcgtgaacccgggaggcagagcttgcagtgagcgagattgtgccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaatatataaaaaattagacaggcatggtggcacatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttaaacccaggaggtggaggttgcactgtgctgaagactgcattactgcattccagcttgggcaacagagtgactccttctccaaaaaaaaaaaaaaaaaaaTCTCATGGTATGCATAGTTTTTCACTACAGAGTCTCCAGTATTTCCTTGTGATACAGAATTCCAAATTCAACAAAGCAGCAGTGCAAGCTCTATGctgtaaaaccacaaacaaaaggaactgtactataaagacgacactagttggcaaagttgcttctcatggggAGAC-----------TGTTG----CTGTGTTTACTGGATGAGCAAACAAAT----GGTAAGGGGGAAAAATAACAGTACAAATTTTTATT-AATACTAATAAAATCATG i nomLeu3.chr10 C 0 I 2 s papAnu2.chr19 47899211 492 + 51301725 ggcggat--cacaaggtcgggagttcgaga------------------------------ccagactggccaacatggtgaaaccccgtctctactaaaaatacaaaaaattagccaggtgtggtggcacgtgcctgtaatctcagctacttgggaggctgaggcaggagaattgcttaaacccagaaggcggaggttgcattgagttgAAGACtgcgctattgcactctagcctgggcaac--agcaactctgtctca-----aaaaaaaacaaaaa---catggtatGCCTAGTTTTTCTCTATAGAGTCTCCAGGATTTCCTTGTGATACAGAATTCCAAGTTCAACAAAGCAACAGTGCAAGCTCTACACTGTAAAACCACAAACAAAAGGAACT--------------ACTCAAGTTGGCAAAGTTGCTTCTCATGGGGAGACAATAACTTTAACATTGCTGTCTGTGTTTACTGGATGAGCAAACAAATGGATGGTAAGGGGGAAAAATAACAGTACAAGTTTTTATTAAACact-----aataaaa i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I e macFas5.chr19 55792463 65 + 59248254 I e rheMac3.chr19 60651408 864 + 64156825 I a score=171291.000000 s hg38.chr19_GL949747v2_alt 647835 271 + 729520 tttttttttgtttgttttgagacagtttc-ttct-tgttgcccaggctggagtgcaatggcacgattttggctcactgcaacctccgcctccccgggttcaagcgattctcttgcctcgacctactgagtagctgggattataggcatgtgccaccaagcctggctaa-ttttgaatttttagcagagacggggtttttccatgttggtcaggctggtctcgaactcccgacctcaggtgatccaccagccttggtctcccaaagtgctgggat s panTro4.chr19 59916514 267 + 63644993 -ttttttttgtttgttttgagacagtttc-ctct-tgttgcccaggctggagtgcaatgacacgattttggctcactgcaacctccgcctccccgggttcaagcgattctcttgcctcgacctactgagtagctgggattacaggcatgtgccaccaagcctggctaa-ttttg---tattagcagagacggggtttttccatgttggtcaggctggtctcgaactcccgacctcaggtgatccaccggccttggtctcccaaagtgctgggat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103357434 271 - 106955855 tttttgtttgttt-ttttgagacaggttcactct-tgttgcccatgctggagtgcaatggaactattttggctcattgcaacctccacctccccaggttcaagcgattctcctgcctcaacctcccaagtacctggtattatatgcatatgccaccccgcctacctaa-ttttgtatttttagcaaaaacggggtttttccatgttggtcaggctggtctccaactcccgaactcaagtgatccaccggccttggtctcccatagtgctgggat i nomLeu3.chr10 I 2 M 100 s macFas5.chr19 55792528 273 + 59248254 ttctttttttttttctttgtggcagaatcttgctatgtcgcccaggctggagtgcaatggcacaatctcagctcattgcagcctccgcctcctc-atttcaagcaattctcccatctcagcctcccatgtagctgggaccacaggtgtgcaccactgcacccaggtaatttttgtattttttgtagagacagggtttcaccaggttgcccagactggtctcgaactactgagttcaggtgatctgcccagcttggcctccccaagtggtgggat i macFas5.chr19 I 65 C 0 s papAnu2.chr19 47899703 269 + 51301725 --taacttttttttttttgagacagtttcactct-tgttgtccaggttggagtgcaatggcacgattttagcacaccgcaacctccacctcccctggttcaagcgattctcctgcctcggcctcccgagtagctgggattacaggtgc-cgccaccgcacctggctaa-ttttgtatttttagtagagacagggttttaccatgttgatcaggctggtctcgaagtcctaacctcaggtgatccacctgccttggtctcccaaagtgctgggat i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I e rheMac3.chr19 60651408 864 + 64156825 I a score=42046.000000 s hg38.chr19_GL949747v2_alt 648106 127 + 729520 tacaggtataagtcaccgcacctggcAACAtttttttcttttttttttttttttttttttttttttttGGTGGcagaatcttgctctttcacccaggctggaatgcaatggcacgatctcgggtcac s panTro4.chr19 59916781 120 + 63644993 tacagctatgagtcaccgcacctggcAACATttttttc-------cttttctttttttttttttttctggtggcagaatcttgctctttcacccaggctggaatgcaatggcacgatctcggctcac i panTro4.chr19 C 0 C 0 s macFas5.chr19 55792801 119 + 59248254 tgtatgtctgagccaccacacctggccAAAAGTAGtt--------ttaattttttttttttttttttttgagacggagtcttgctctgttgcccaggctggagtgcagtggcacgatctcagctcac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47899972 107 + 51301725 tacaggcgtaagtcaccgcacccagcaaca--------------------tttctttttttttttctttgtggcagaatcttgctctgttgcccaggctggagtgcaatggcacgatctcagctcac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e nomLeu3.chr10 103357705 100 - 106955855 M e chlSab2.chr6 47604930 304 + 50890351 I e rheMac3.chr19 60651408 864 + 64156825 I a score=165485.000000 s hg38.chr19_GL949747v2_alt 648233 236 + 729520 tgcagcctccacctccccagtttaagcagttctcccatctcagcctcccatgtagctgggaccacaggtgtgcaccactgcacccaggtaa-tttttgcatttttggtagagatagggttttgccacgttgtccagactggtcttgaactcctgagctcaggtgatctgcccaccttggcctccccaaatgctgggattataggcatgagccaccacacctggtcAAAAGTAGTTTT s panTro4.chr19 59916901 236 + 63644993 tgcagcctccacctccccagtttaagcagttctcccatctcagcctcccatgtagctgggaccacaggtgtgcaccactgcacccaggtaa-tttttgtatttttggtagagatagggttttgccacgttgtccagactggtcttgaactcctgagctcaggtgatctgcccaccttggcctccccaaatgctgggattataggcatgagccaccacacctggTAAAAAGTAGtttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103357805 236 - 106955855 tgcagcctctacctcccaagtttaagcagttctcccatctcagcctcccatgtagctgggaccacaggtgtgcaccactgcacccaggtaa-tttttgtatttttggtaaagatagggtttcgccacgttgcccagactggtcttgaactcctgagctcaggtgatctgcccaccttggcctccccaagtgctgggattataggcatgagccaccacacctggtcAAAAGTAGTTTT i nomLeu3.chr10 M 100 C 0 s macFas5.chr19 55792920 222 + 59248254 tgcaagctccgcctcctgggccgacgccattctcctgcctcagcctcccgagtagctgggaccacaggtgcccgcctccgcacccggctaattttttgtatttttagtagagacgggatttcactgtgttagccaggatggtctcgatctcctgacctt--gtgatccacccggctcggcctcccagactgctgggattacaggcgtgagccaccgcacccggc------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47900079 236 + 51301725 tgtagcctccacctccccatatcaagcaattctcccatctcagcctcccatgtagctgggaccacaggtgtgcaccactgcagccaggtaa-tttttgtattttttgtagagacagggtttcaccatgttgcccagactggtcttgaactactgagttcaggtgatctgcccagcttggcctctcCAAGTGGTGGGATTGTAtgtctgagccaccacacctggccaaaagtagtttt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I e rheMac3.chr19 60651408 864 + 64156825 I a score=209469.000000 s hg38.chr19_GL949747v2_alt 648469 166 + 729520 AATATTTAAATTTAAAACTAAAAAAGTTAATCTCTCT-TCCTACTTTCATTTCTTCATCAGGGGCTATTGGTTTATTCCCACCGACTAGATCCAAGTTCTCTGATACTACCTTTAAACCACTCCATCACTTTCCAGTTCCACTGCATACAGTGTGGGCTTCTGAGGT s panTro4.chr19 59917137 166 + 63644993 aatatttaaatttaaaactaaaaaaGTTAATCTCTCT-TCCTACTTTCATTTCTTCATCAGGGGCTATTGGTTTATTCCCACCGACTAGATCCAAGTTCTCTGATACTACCTTTAAACCACTCCATCACTTTCCAGTTCCACTGCATACAGTGTGGGCTTCTGAGGT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103358041 166 - 106955855 AATATTTAAATTTAAAACTAAAAAAATTAATCTCTCT-TCCTACTTTCATTTCTTCATCAGGGGCCATTGGTTTATTCTCACCGACTAGATCCAAGTTCTCTGATACTACCTTTAAACTACTCCATCACTTTCCAGTTCCACTGCATACAGTTTGGGCTTCTGAGGT i nomLeu3.chr10 C 0 I 16 s rheMac3.chr19 60652272 167 + 64156825 AATATTTAAATTGAAAACTAAAAAAATTAATCTCACTCTTACACTTTCATTTCTTCATCAGGGGCCATTGGTTTATTTTTACCGACTAGATGCAAGTTCTCTGATACTACCTTTAAACCACTCCATCACTTTCCAGTTCCACTGCATACTGTGTGGGCTTCTGAGGT i rheMac3.chr19 I 864 C 0 s macFas5.chr19 55793142 167 + 59248254 AATATTTAAATTGAAAACTAAAAAAATTAATCTCACTCTTACACTTTCATTTCTTCATCAGGGGCCATTGGTTTATTTTTACCGACTAGATCCAAGTTCTCTGATACTACCTTTAAACCACTCCATCACTTTCCAGTTCCACTGCATACTGTGTGGGCTTCTGAGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47900315 167 + 51301725 aatagttaaatttaaaactaaaaaaattaatcttactCTTACACTTTCATTTCTTCAACAGGGGCCATTGGTTTATTTTTACCGACTAGATCCAAGTTCTCTGATACTACCTTTAAACCACTCCATCACTTTCCAGTTCCACTGCATACTGTGTGGGCTTCTGAGTT i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I a score=129088.000000 s hg38.chr19_GL949747v2_alt 648635 92 + 729520 TTCCTGGTTCAAGGTGTCCTTGTTCAATGCGGCATGG-GTCATTCCCTGAGCAtttt-----------------------tttttttttttgacagtctcgctccattgcccggtt s panTro4.chr19 59917303 99 + 63644993 TTCCTGGTTCAAGGTGTCCTTGTTCAATGTGGCATGG-GTCATTCCCTGAGCAtttt----------------gtttttgtttttttttttgacagtctcgctccattgcccggtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56814518 100 + 60714840 TTCCTGGTTCAAGGTCTCCTTGTTCAATGGGGCACGGTGACATTCCCTGAGCAtttt----------------ttttttttttttttttttgacagtctcactccgttgcccggtt i ponAbe2.chr19 T 32152 C 0 s nomLeu3.chr10 103358223 95 - 106955855 TTCCTGGTTCAACGTCTCCTTGTTCAATGGGGCATGG-GTCATTCCCTGAGCAtttt--------------------ttttttttttttttgacagtctcgctccattgcctggtt i nomLeu3.chr10 I 16 C 0 s rheMac3.chr19 60652439 111 + 64156825 TTCCTGTTTCAAGGTCTCCTTACCCAACACAGCATAG-GTCATTCCCTGAGCATCCCCCCA----CTCttttttttttttttttttttttggacagtctcgctccattccctggtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55793309 115 + 59248254 TTCCTGTTTCAAGGTCTCCTTATCCAACACAGCATAG-GTCATTCCCTGAGCATCCCCCCCGCCttttttttttttttttttttttttttGGACagtctcgctccattccctggtc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47900482 95 + 51301725 TTCCTGTTTCAAGGTCTCCTTATCCAACCCAGCACAG-GTCATTCCCTGagccccctcccc--------------------tttttttttggacagtctcGCTCCATTCcctggtc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I a score=121095.000000 s hg38.chr19_GL949747v2_alt 648727 56 + 729520 tggagtgcagtggtgtgacctcggcttactgcagcctctgcctcccaagttcaagc s panTro4.chr19 59917402 56 + 63644993 tggagtgcagtggtgtgacctcggcttattgcagcctctgcctccgaagttcaagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56814618 56 + 60714840 tggagtgcagtggtgtgatctcagcttactgcagcctctgcctcccaagttcaagc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103358318 56 - 106955855 tggagtgcagtggtgtgatctcggcttcctgcagcctcttcctcccaagttcaagc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60652550 56 + 64156825 tggagtgcagtggcgtgatctcggctcactgtaacctccgcctcccaagttcaagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55793424 56 + 59248254 tgaagtgcagtggcgtgatctcggctcactgcaacctccgcctcccaagttcaagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47900577 56 + 51301725 tggagtgcagtggcgtgatctcggctcactgcaacctccgcctcccaagttcaagc i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 10168 50 + 138250 tggagcgcagtggtgtgatttcaactcactgcaacctccgcctcccaggt------ i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e chlSab2.chr6 47604930 304 + 50890351 I a score=1040625.000000 s hg38.chr19_GL949747v2_alt 648783 442 + 729520 aattctgcct--caggctcccggataatttttgcatttttagtagagaca-gggtttcaccgcgctggccaggctggtctcgaacccctaacctcaagcgatctgcctgcctcggtctcccaaagtgctgggattacagacataagctaccgtgcccggccTCCAGAGCATCTTTATTCTCAGTTTCAGCGGGAAGAAGGGGGAAGGTTGGTAAAAAGAGAGGCACAAAGTTTAAAAAGGACATTGCGTGAAGAAACTAaaggtttctccttctccacactattgaca-tttgggatcggatcactactcgttgggaaac---gtcctgtacatttccagggtgttcggcaccatccctagcctctaccccctagataccagctcacatcctcacagttaacagtgatcaaaaatgtctctgggcagtagaaaatatttcctgaaatgc s panTro4.chr19 59917458 441 + 63644993 aattctgcct--caggctcccggataatttttgcatttttagtagagaca-gggtttcaccgtgctggccaggctggtctcgaacccctaacctcaagcgatctgcctgcctcggtctcccaaagtgctgggattacagacataagctaccgtgcccggccTCCAGAGCATCTTTATTCTCAGTTTCAGCGGGAAGAAGGGAGAAGGTTGGT-AAAAGAGAGGCACAAAGTTTAAAAAGGACATTGCGTGAAGAAACTAaaggtttctccttctccacactattgaca-tttgggatcggatcactactcgttgggaaac---gtcctgtacatttccagggtgttcggcaccatccctagcctctaccccctagataccagctcacatcctcacagttaacagtgatcaaaaatgtctctgggcagtggaaaatatttcctgaaatgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56814674 439 + 60714840 aattctgcct--cagccttccggataatttttgcatttttagtagagaca-gggtttcaccgtgttggccaggctggtcttgaacccctaacctcaagcgatcctcctgcctcggtctcccaaagtgctgggattacacacataagctaccgtgcccggccTCCAGAGCATCTTTATTCTCAGTTTCAGCGGGAAGAAGGGGGAAAGTTGGT-AAAAGAGAGGCACAAAGTTTGAAAAGGACGTTGCATGAAGAAACGAaaggtttctcattctccacactattgaca-tttggggtcagatcactacttgttgggaaacatggtcctgtacatttacagggtgtttggcaccatccctagcctctaccccctagataccag----catcctcacagtt-atgatgaccaaaaatgtctctgggcattagaatatatttcctgaaatgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103358374 439 - 106955855 aattctgcct--caggctcctggataatttttgcatttttagtagagaca-aggtttcaccgtgttggccaggctggtcttgaacccctaacctcaagcgatccgcctgcctcagtctcccaaaatgctgggattacagacataagctaccgtgcccgaccTCCAGAGCATCTTTATTCTCAGTTTCAGCGGGAAGAAGGGGGAAAGGTGGT-AAAAGAGAGGCATAAAGTTTAAAAAGGACATTGCATGAAGAAACTAaaggtttctcattctccacactattgaca-tttggggtgagatcactgcttggtgggaagcatggtcctgtacatttacacggcgcctggcaccatccccagcctccaccccctggatgccag----catccccccagtg-atgatgatcaaaaacgtctctgggctgtagaaaatacttcctgaaatgc i nomLeu3.chr10 C 0 I 115 s rheMac3.chr19 60652606 421 + 64156825 aattctgccccacacactcccggcaaatttttacatttttagt--agaca-ggatttcaccatgttggccaggctggtcttgaa---ctgacctcaagtgatccacctgcctcagcctcccaaagtgctggaattacagaaataagctaccgtgcccggccTCCAGAGCATCTTTATTCTCAGGTTCACTGGGAGGAAGGGGCGAAGTTGGT-AAAAGAGAGGCACAGAGTTTTAAAAGGAC-------------ACTAaaggtttctcattctccacactattgaca-tttggggtcagatcactacttgttaggaaacatggtcctctacatttacagtatgtttggcagcatccctagcctctacccactagataccag----catcct--cagtt-atgacgatcaaaaatgtctctgggcattagaaaatatttgctgaaatgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55793480 423 + 59248254 aattctgccccacacactcccggcaaatttttacatttttagt--agaca-ggatttcaccatgttggccaggctggtcttgaa---ctgacctcaagtgatccacctgcctcagcctcccaaagtgctggaattacagaaataagctacagtgcccggccTCCAGAGCATCTTTATTCTCAGGTTCACTGGGAGGAAGGGGCGAAGTTGGT-AAAAGAGAGGCACAGAGTTTTAAAAGGAC-------------ACTAaaggtttctcattctccacactattgaca-tttggggtcagatcactacttgttaggaaacatggtcctctacatttacagtatgtttggcagcatccctagcctctacccactagataccag----catcctcacagtt-atgacgatcaaaaatgtctctgggcattagaaaatatttgctgaaatgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47900633 425 + 51301725 aattctgccc--cagactcctggcaaatttttgcatttttagt--agacaggggtttcaccatgttggccaggctggtcttgaactcctgacctcaagtgatccacctgcctcagcctcccaaagtgctgggattacagaaataaGCTACCGGGCCCGGCCTCCAGAGCATCTTTATTCTCAGGTTCACTGGGAGGAAGGGGGAAAGTTGAC-AAAAGAGAGGCACAGAGTTTTAAAAGGAC-------------ACTAAAGGTTTCTCATTCTccacactattgaca-tttggggtcAGATCACTACTTGTTAGGAAACATGGTCCTCTACATTTACAGTATGTTTGGCAGCATCCctagcctctacccactagataccag----CATCCTCACAGTC-ACGATGATCAAAAATGTCTCTggacattagaaaatatttactgaaatgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47605234 423 + 50890351 aaTTCTGCCC--CAGactcccggcaaatttttgcatttttagt--agacaggggtttcaccatgttggccaggctggtcttgaactcctgacgtcaagtgatccacctgcctcagtctccgaaagtgctgggattacagaaataaactactgtgcccagGCTCCAGAGCATCTTTATTCTCAGGTTCACCGGGAGGAAGGGGGGAAGTTGGT-AAAAGAGAGGCACAGAGTTTTAAAAGGAC-------------ACTAaaggtttctccttctccacactattgaca-tttggggtcagatcactacttgttaggaaacatggtcctctacatttacagggtgtttggcagcatccctagcctctacccactagataccag----catcctcacagtt-acgacgatcaaaaatg--tctgggcattagaaaatattcactgaaaggc i chlSab2.chr6 I 304 C 0 s calJac3.chr22_GL285922_random 10218 346 + 138250 ---------------------------------------------------------------------------------------------ttaagcaatccacctgcctcagcctccccaagtgctggaatgacggacatgagctatcgcgcctggcCTCCAGAGCATCTTTATTCTCAGGTTCGGCAGGAGGAAGGGGGAAAGTTGGT-GAA--AGAGGCATGCAGTTTAAAAGGGACATTGCGTGAAGAAACc-aaggtttcttattgtccacactgttaacgttttgaggctagatcactgcttgctggttaacatggtcctgtacgttgataggg-gtttggcaccatccctagcctccactgaccagaggccag----catcctcacagct-atgatgaccaaaagtgtctctgagaattagaaaatacttcctgaaatgc i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I a score=142638.000000 s hg38.chr19_GL949747v2_alt 649225 45 + 729520 aaagttttcttaggttgagaaccattgTAATCTAGCCCCATCTTT s panTro4.chr19 59917899 45 + 63644993 aaagttttcttaggttgagaaccattgTAATCTAGCCCCATCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815113 45 + 60714840 aaagttttcttaggttgagaaccattgTAATCTAGCCCCATCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103358928 45 - 106955855 GAAGTTTTCTTAGGTTGAGAGCCATTGTAATCTAGCCCCATCTTT i nomLeu3.chr10 I 115 C 0 s rheMac3.chr19 60653027 45 + 64156825 aaaattttcttaggttgagaaccattgTAATCTAGCCCCATCTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55793903 45 + 59248254 aaaattttcttaggttgagaaccattgTAATCTAGCCCCATCTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47901058 45 + 51301725 AACATTTTCTTAGGTTGAGAACCATTGTAATCTAGCCCCATCTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47605657 45 + 50890351 aaaattttcttaggttgagaaccattgTAATCTAGCCCCATCTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 10564 45 + 138250 aaaatttccttaggttgtgaaccattgTGATCTAGCCCCATCTTT i calJac3.chr22_GL285922_random C 0 I 288 e canFam3.chr1 20065152 1307 - 122678785 I a score=800544.000000 s hg38.chr19_GL949747v2_alt 649270 349 + 729520 AGAGAAG-AAATTGAGTAACGGATCTACATCCATTGAGGAAC--TATCGACACCCCAGGGGCCCATGAAATGTAAACTCGCACTCACAATTAACCATCTTTCTCCAACGTGTGTATTTCATGTAGCCACACTCTCAGATGCCCACCCCCATGACCTACAAGTCCTAAACAGGGAAACCTGTGGCACATGGGTTC----ATGTGTGTCTGAATCTATA--CGTTCAGAGATGAACAAGTACTGCTCTCCCTA----------------TACCTGTGACCACTCGCCTCCGCCCATCACTGAATTCTGAAAATGTGGCCTCAGGCTCACAGCAGCATTAGCACTTGCTTGCTCTGGATCTCATCACATTGATGATC s panTro4.chr19 59917944 350 + 63644993 AGAGAAGAAAATTGAGTAACGGATCTACATCCATTGAGGAAC--TATGGACACCCCAGGGGCCCATGAAATGTAAACTCGCACTCACAATTAACCATCTTTCTCCAACGTGTGTATTTCATGTAGCCACACTCTCAGATGCCCACCCCCATTACCTACAAGTCCTAAACAGGGAAACCTGTGGCACATGGGTTC----ATGTGTGTCTGAATCTATA--CGTTCAGAGATGAACAAGTACTGCTCTCCCTA----------------TACCTGTGACCGCTCGCCTCCGCCCATCACTGAATTCTGAAAATGTGGCCTCAGGCTCACAGCAGCATTAGCACTTGCTTGCTCTGGATCTCATCACATTGATGATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815158 364 + 60714840 AGAGAAG-AAATTGAGTAACGTATCTACATACATTTAGGAAC--TATTGACACCCTAGGGGCCCATAAAATGTAAACTTGTACTCATAATTAACCATCTTTCTCCAACGTGTGTATTTCATCTAGCCATACTCTCAGATGCCCACCCTCATGACCTA-AAGTCCTAAACAGTGAAACCTGTGGCACATGGGCTC----ATGTGTGTCTGAATCTATA--TGTTCAGAGATGAACAAGTACCGCTGTCCCTGTTTTCTTGCACCTCCTTACCTGTGACCACTCACCTCCGCCCATCACTGAATTCTGAAAATGTGGCCTCAGGCTCACAGCAGCTTTAGCACTTGCTTGCTCTGGATCTCATCACATTGATGATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103358973 362 - 106955855 AGAGAAG-AAATTGAGTAAC--ATCTACATCCATTTAGGAAC--TATTGACACCCCAGGGGCCCATAAAATGTAAACTTGCACTCATAATTCACCATCTTTCTCCAATGTGTGTGTTTCATCTAGCCATACTCTCAGATGCCTACCCTCATGACCGACAAGTCCTAAACAGTGAAACCTGTGGCACGTGGTTTC-----TGTGTGTCTGAATCTGTA--TGTTCAGAGATGAACAAGTACTGCTGTCCCTATTTTCTTGCACCTCCTTACCTGTGACCACTCGCCTCCGCCCATCACTGAATTCTGAAAGTGTGGCCTCAGGCTCACAGCAGCATTAGCGTCTGCTTGCTCTGGATCTTATCACACTGATGATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60653072 317 + 64156825 ACAGAAG-AAATTGAGTAATGTATCCACATCCATTTAGGAACTGTATTGATACCCCAGGGGCCCATAAAATGTAAACTTGCACTCATAATTAACCATCTTTCTCCAATGTGTGTACTTCATCTAGCCAAGCTCTCAGATGCCTACCCTCATGACCTACAAGTACTAAACAGTGAAACCTGTGGCACATGGGTTCGTTCATGTGTGTCTGAATCTAT----GTCCAGAGATGAACAAGTACTGCTGTCC--GTTTTCTTGCACCT---CACCTGTGACCACTCGCCTCTGCCCATCACTGAAT-----------------------------------------------TCTGGATCTCATCACATTGATGATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55793948 317 + 59248254 ACAGAAG-AAATTGAGTAATGTATCCACATCCATTTAGGAACTGTATTGATACCCCAGGGGCCCATAAAATGTAAACTTGCACTCATAATTAACCATCTTTCTCCAACGTGTGTACTTCATCTAGCCAAGCTCTCAGATGCCTACCCTCATGACCTACAAGTACTAAACAGTGAAACCTGTGGCACATGGGTTCGTTCATGTGTGTCTGAATCTAT----GTCCAGAGATGAACAAGTACTGCTGTCC--GTTTTCTTGCACCT---CACCTGTGACCACTCGCCTCTGCCCATCACTGAAT-----------------------------------------------TCTGGATCTCATCACATTGATGATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47901103 319 + 51301725 ACAGAAG-AAATTGAGTAATGTATCTACATCCGTTTAGGAACTGTATTGATACCCCAGGGGCCCATAAAATGTAAACTTGCACTCATAATTAACCATCTTTCTCCAACGTGTGTACTTCATCTAGCCAAGCTCTCAGATGCCTACCCTCATGACCTACAAGTACTAAACAGTGAAACCTGTGGCACATGGGTTCATTCATGTGTGTCTGAATCTAT----GTCCAGAGATGAACAAGTACTGCTGTCCCTGTTTCCTTGCACCT---CACCTGTGACCACTCGCCTCTGCCCATCACTGAAT-----------------------------------------------TCTGGATCTCATCACATTGATGATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47605702 313 + 50890351 CCAGAAG-AAATTGAGTAATGTATCTACATCCGTTTAGGAACGGTATTGATACCCCAGGGGCCCATAAAATGTAAACTTGCACTCGTAATTAACCATCTTTCTCCAACGTGTGTACTTCATCTAGCCATGCTCTTAGATGCCTACCCTCACGACCTACAAGTAC------GTGAAATCTGTGGCACATGGGTTCGTTCATGTGTGTCTGAATCTAT----GTCCAGAGATGAACAAGTACCGCTGTCCCTGTTTTCTTGCACCT---CACCTGTGACCACTCGCCTCTGCCCATCACTGAAT-----------------------------------------------TCTGGATCTCATCACATTGATGATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 10897 337 + 138250 aaggaag-aaaTTGAGTAATGTATGCACATTCGTTTAGGAACTGTATTGACACACCAGGGGTCCATAAAATGTAACCGTGCACTCATAATTGACCATCTTTCTCCAACGTGTGTATTTCATCTGGCC----------------GCCCTCATGACAGGTAAGTACTGAAAACTGAAA--TGGAGCACATGGG----------------TGAATCTGTAGGTGTTCAGAGGTGAACAAGTGCTGCTGTCT--TGTTTCTCACACCTCCTTACCTGTGACCGCCCACCTCTGCCCACCACTGAgttctgaaaatgtggcctcaggctcacagcagcattagcaCTTGCTTGCTCTCGATCTCCTCACATTGATGATC i calJac3.chr22_GL285922_random I 288 I 316 e canFam3.chr1 20065152 1307 - 122678785 I a score=218854.000000 s hg38.chr19_GL949747v2_alt 649619 80 + 729520 AAGAACAAAGTATTCACTGGGTTCTCTGCTAAGGATAC-AAAAAAAACCATTCCACAATTCCACGGCCATGTTTGCACCCA s panTro4.chr19 59918294 80 + 63644993 AAGAACAACGTATTCACTGGGTTCTCTGCTAAGGATCC-AAAAAAAACCATTCCACAATTCCACGGCCATGTTTGCACCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815522 80 + 60714840 AAGAACAAAGTATTCACTGGGTTCCCTGCTAAGGATAC-AAAAAAAACCATTCCACAATTCCATGGCCATGTTTGTACCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103359335 80 - 106955855 GAGAAGAAAGCATTCACTGGGTTCTCTGCTAAGGATAC-AAAAAAAACCCTTCCACAGTTCCATGGCCATGTTTGCACCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60653389 79 + 64156825 AAGAACAAAG--TTCACTGGGTTCTCTGCTAAGGATACAAAAAAAAATCATTCCACAATTCCATGGCCATGTTTGCACCCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55794265 79 + 59248254 AAGAACAAAG--TTCACTGGGTTCTCTGCTAAGGATACAAAAAAAAATCATTCCACAATTCCATGGCCATGTTTGCACCCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47901422 78 + 51301725 AAGAATGAAG--TTCACTGGGTTCTCTGCTaaggatac-aaaaaaaatcattccacAATTCCATGGCCATGTTTGCACCCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47606015 76 + 50890351 AAGAACGAAG--TTCACTGGGTTCT---CTAAGGATACAGAAAAAAATCATTCCACAATTCCATGGCCATGTTTGCACCCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 11550 80 + 138250 aagaacaaaGTATTCACTGGGTTCTCTGATAAGGATAC-AAAAAAAATCATTCCACAGTCCCATGGCCGTGTTTGCACCCA i calJac3.chr22_GL285922_random I 316 C 0 e canFam3.chr1 20065152 1307 - 122678785 I a score=194044.000000 s hg38.chr19_GL949747v2_alt 649699 68 + 729520 GGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGCTTGGGA-AATGTTCCTGGAGC--AAAAAA-------AAGAGC s panTro4.chr19 59918374 70 + 63644993 GGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGCTTGGGA-AATGTT-CTGGAGC--AAAAAA----AATAAGAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815602 71 + 60714840 GGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGCTTGGGA-AATGTTCCTGGAGC--AAAAAA----AATAAGAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103359415 75 - 106955855 GGAACCACGAGGGCTGGGTTAGCCCAGATGATGGGCTCGGGA-AATGTTCCCGGAAC--AAAAAAAAACAATAAGAGC i nomLeu3.chr10 C 0 I 167 s rheMac3.chr19 60653468 63 + 64156825 CGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGCTTGGGA-AGTGTTCTTGGAGC-------A-------AAAAGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55794344 68 + 59248254 CGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGCTTGGGA-AGTGTTCCTGGAGC--AAAAAA-------AAAAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47901500 70 + 51301725 CGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGCTTGGGA-AGTGTTCctggagcaaaaaaaa-------aagagc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47606091 70 + 50890351 CGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGTTTGGGA-AGTGTTCCTGGAGCAAAAAAAA-------AAGAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 11630 69 + 138250 GAAACCACAAGGGCTGCGTTAGCCCAGGTGGTGGGTTTGGGCTAATGTT-CTGGAGC--AAAAAA------GCAGAAC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 102786277 66 + 122678785 GGGATCACAGAGCCTGGCTCAGCCCAGATGGTGGGTTTGGGG-AGGGTCCCTGGAAG--GAAACA-------GAGG-- i canFam3.chr1 n 1307 C 0 a score=32493.000000 s hg38.chr19_GL949747v2_alt 649767 10 + 729520 CAGAAGTCAT s panTro4.chr19 59918444 10 + 63644993 CAGAGGTCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815673 10 + 60714840 CAGAGGTCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103359657 10 - 106955855 CAGAGGTCAT i nomLeu3.chr10 I 167 C 0 s rheMac3.chr19 60653531 10 + 64156825 CAGAGGTCAT i rheMac3.chr19 C 0 I 113 s macFas5.chr19 55794412 10 + 59248254 CAGAGGTCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47901570 10 + 51301725 cagaggTCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47606161 10 + 50890351 CAGAGGTCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 11699 10 + 138250 CGGAGATCAT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 102786343 9 + 122678785 -CTGGGTCAC i canFam3.chr1 C 0 C 0 a score=521908.000000 s hg38.chr19_GL949747v2_alt 649777 220 + 729520 GAGAGCCTGACCCCCTCC----CCCAACGCG--------------------------------------CACACACACACACCACTCTCTACCTCCAAGCCTCATTTTCAGGCTT---------CTCAAAGCTAAGGTCACTCCCATGAGCTAAGCCGCGC---TTTTCTCAATCCTCAGCTCTTCCACAAGAATAGGAAGAACT------------------CTCTCCTGT-----TCAAGATCCTGTGGCTCAGCTGCAGCTCTGGAAGAAAGACCCCGGTGAGGGTC-TTGCTTT s panTro4.chr19 59918454 255 + 63644993 GAGAGCCTGACCCCCTCC----CCCAACGCGGGCGCGCGcacacacacacacacacacacacacacacacacacacacacacCACTCTCTACCTCCAAGCCACATTTTCAGGCTT------------AAAGCTAAGGTCACTCCCATGAGCTAAGCCGTGC---TTCTCTCAATCCTCAGCTCTTCCACAAGAATAGGAAGAACT------------------CTCTCCTGT-----TCAAAATCCTGTGGCTCAGCTGCAGCTCTGGAAGAAAGACCCCGGTGAGGGTC-TTTCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815683 227 + 60714840 GAGAGCCTGATCCCTTCC----CCCAATGCG----------------------------------------CACACACACACCACTCTCTACCTCCAAGCCTCATTTTCAGGCTTTTCAGGCTTCTCAAAGCTAAGGTCACTCCCATGAGCTAAGCCGCGC---TTCTCTCAATCCTCAGCTCTTCCACAAGAATAGGAAGAACT------------------CCCTCCTGT-----TCAAGATCCTCTGCCTCAGCTGCAGCTCTGGAAGAAAGACCCCAGTGAGGGTC-TTTCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103359667 240 - 106955855 GAGAGTCTGACCCCCTCC----CCCAATGCG------------------CGcacacacacacacacacacacacacacacCCCACTCGCTACCTCCAAGCCTCATTTTCAGGCTT---------CTTAAAGCCAAGGTCACTCCCATGAGCTAAGCCGCGC---TTCTCTCAGTCCTCAGCTCTTCCACCAGAATACGAAGACCT------------------CTCTGCTGT-----TGAAGATCCTCTGGCTCAGCTGCAGCTCTGGAGGAAAGACCCCGGTGACGGTC-TTTCTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60653654 214 + 64156825 GAGAGCCTGATCCCCTCC----CTCAACACA--------------------------------------CACACACACACACCACT--TTACATCCAAGTCTCATTTTCAGGCTT---------TTCAAAGCTAAGATCACTCCCATGAGCTACGCCCGGC---TTCTCTCAATCCTCAACTCTTCCACGAGAATAGGAAGAACT------------------CTCTGCTGT-----TCGAGATCCTCTGGCTCAGCCGCAGCTCTGGAAGAAAGACCTCAGTGAGGGT-----CTTT i rheMac3.chr19 I 113 C 0 s macFas5.chr19 55794422 214 + 59248254 GAGAGCCTGATCCCCTCC----CTCAacaca--------------------------------------cacacacacacaccacT--TTACATCCAAGTCTCATTTTCAGGCTT---------TTCAAAGCTAAGGTCACTCCCATGAGCTACGCCCGGC---TTCTCTCAATCCTCAACTCTTCCACGAGAATAGGAAGAACT------------------CTCTGCTGT-----TCGAGATCCTCTGGCTCAGCCGCAGCTCTGGAAGAAAGACCTCAGTGAGGGT-----CTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47901580 208 + 51301725 GAGAGCCTGATcccctc----------aaaa--------------------------------------cacacacacacaccact--ctaCATCCAAGTCTCATTTTCAGGCTT---------CTCAAAGCTAAGGTCACTCCCATGAGCTACGCCCGGC---TTCTCTCAATCCTCAGCTCTTCCACGAGAACAGGAAGAACT------------------CTCTGCTGT-----TCGAGATCCTCTGGCTCAGCCGCAGCTCTGGAAGAAAGACCTCGGTGAGGGT-----CTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47606171 208 + 50890351 GAGAGCCTGATCCCCTCC----CTCA----A--------------------------------------CACACACACACACCACT--CTACATCCAAGTCTCATTTTCAGGCTT---------CTCAAAGCTAAGGTCACTCCCATGAGCTACGCCGGGC-----CTCTCAATTCTCAGCTCTTCCATGAGAATAGGAAGAACT------------------CTCTGCTGT-----TCGAGATCCTCTGGCTCAGCCGCAGCTCTGGAAGAAAGACCTCGGTGAGGGT-----CTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 11709 217 + 138250 GAGAGCCTGACCCCCTCC----CACA----G--------------------------------------CACATACGCATACCACTCTCTACCTCCAAGCCTCATTTTCAGGCTT---------CTCAAAGCTAAGGTCAATCCCATGAGTTAAGGTGCAC---GTTGCTCAATCCACAGCTGTTCCACAAGAATAGAAAGAACT------------------CTCTCCTGT-----TCAAGACCCTCTGGCACAGCCACAGCTCTGGCAGACAGACTTCGGTGAGGGTCATCCATTT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 102786352 224 + 122678785 AAGGTCCTCTCCACCCTCAGTTCCCAACTCA--------------------------------------GCCCCAAACACCCAGAT--GTCCCCCC-----------TCTGTCAA---------CCCAGAGCT--GCTGATCTCCATCCCCCCTGCCTGGTGGGTATTCCCTGTCCCCAGT----------GAGGAGGTGGGACTGGGACCCCTGGGGACAGACTCACCTGCCTGCACTGAGTCCCTGGAGCCCACACTCAGCCCTGGAAGAGAGTCCCTATGAGAGGT--TTGCCCT i canFam3.chr1 C 0 n 0 a score=199254.000000 s hg38.chr19_GL949747v2_alt 649997 65 + 729520 TCACAATCCCCAATCCCAGACCACATCCTGTG-CCCCAAAACAACTTCCATGGTAACCACATCCTT s panTro4.chr19 59918709 66 + 63644993 TCACAATCCCCAATCCCAGACCACATCCTGTGCCCCCAAAACAACTTCCATGGTAACCACATCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815910 65 + 60714840 TCACAATCCCCAATCCCAGACCACATCCTGTA-CCCCAAAACAACTTCCATGGTAACCACGTCCTT i ponAbe2.chr19 C 0 I 113 s nomLeu3.chr10 103359907 65 - 106955855 TCACACTCCCCAATCCCAGACCACATCCTGCG-CCCCAAAACAACTTCCATGGTAACCACATCCTT i nomLeu3.chr10 C 0 I 109 s rheMac3.chr19 60653868 65 + 64156825 TCACAATCCCCAATCGCAGATCACATCCTGTG-CCCCAAAACAACTTCCATGGTCACCACATCCTT i rheMac3.chr19 C 0 I 295 s macFas5.chr19 55794636 65 + 59248254 TCACAATCCCCAATCGCAGATCACATCCTGTG-CCCCAAAACAACTTCCATGGTCACCACATCCTT i macFas5.chr19 C 0 I 97 s papAnu2.chr19 47901788 65 + 51301725 TCACAATCCCCAATCGCAGATCACATCCTGTG-CCCCAAAACAACTTCCATGGTCACCACATCCTT i papAnu2.chr19 C 0 I 97 s chlSab2.chr6 47606379 65 + 50890351 TCACAATCCCCAATCACAGATCACATCCTGTG-CCCGAAAACAACTTCCATGGTCACCACATCCTT i chlSab2.chr6 C 0 I 97 s calJac3.chr22_GL285922_random 11926 65 + 138250 TCACAATCCCCAATCCCAGACCACAGCCTGTG-CCCCAAAACAACTTCCATGGTAACCACATCCCT i calJac3.chr22_GL285922_random C 0 I 25 e canFam3.chr1 102786576 0 + 122678785 I a score=-2973.000000 s hg38.chr19_GL949747v2_alt 650062 5 + 729520 CAGGA--------------------------------------------- s panTro4.chr19 59918775 5 + 63644993 CAGGA--------------------------------------------- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103360081 5 - 106955855 CAGGA--------------------------------------------- i nomLeu3.chr10 I 109 C 0 s calJac3.chr22_GL285922_random 12016 50 + 138250 CAGGCTTCTCGAGGCTTCCCCTACTCACCCAGACAGAGCAGTGTAGATCA i calJac3.chr22_GL285922_random I 25 C 0 e canFam3.chr1 102786576 0 + 122678785 I e ponAbe2.chr19 56815975 113 + 60714840 I e chlSab2.chr6 47606444 97 + 50890351 I e papAnu2.chr19 47901853 97 + 51301725 I e macFas5.chr19 55794701 97 + 59248254 I e rheMac3.chr19 60653933 295 + 64156825 I a score=10270.000000 s hg38.chr19_GL949747v2_alt 650067 14 + 729520 AGTGAA-GTCAGGCA s panTro4.chr19 59918780 14 + 63644993 AGTGAA-GTCAGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56816088 14 + 60714840 AGTGAA-GTCAGGCA i ponAbe2.chr19 I 113 C 0 s nomLeu3.chr10 103360086 14 - 106955855 AGTGAA-GTCAGGCA i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 12066 15 + 138250 AGTAAATGTCATGCA i calJac3.chr22_GL285922_random C 0 I 4 e canFam3.chr1 102786576 0 + 122678785 I e chlSab2.chr6 47606444 97 + 50890351 I e papAnu2.chr19 47901853 97 + 51301725 I e macFas5.chr19 55794701 97 + 59248254 I e rheMac3.chr19 60653933 295 + 64156825 I a score=531889.000000 s hg38.chr19_GL949747v2_alt 650081 261 + 729520 GGAAGTCAAGTCAGAAGAC--GGAATGggctgggcatggtggatcgcacctgtaatcccagcactttgggaggcagaggcaggtggatcacatgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaataccaaaagtagccaggcttggtggtgcatgcctgtaatcccagctactctggaggctgaggcaggagaatcgcttaaa--cccggaaggcggaggttgcaatgagccgagat s panTro4.chr19 59918794 263 + 63644993 GGAAGTCAAGTCAGAAGACAGGGAATGggctgggcatggtggatcgcacctgtaatcccagcactttgggaggcagaggcaggtggatcacatgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaagtagccaggcgtggtggtgcatgcctgtaatcccagctactctggaggctgaggcaggagaatcgcttaaa--cccagaaggcggaggttgcaatgagccgagat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56816102 261 + 60714840 GGAAGTAAAGTCAGAAGAC--GGAGTGggctgggcatggtggatcgcacctgtaatcccagcacttcgggaggcagaggcaggtggatcacataaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccgggcatggtggcgcatgcctgtaatcccagctactctggaggctgaggcaggagaatcagttaaa--cttggaaggcagaggttgcaatgagccgagat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103360100 263 - 106955855 GAAATTAAAGTCAGAAGACAGGGAGTGggctgggcgtggtggatcgcacctgtaatcccagcattttgggaggcagaggcaggtggatcacgtgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctaccaaaaatacaaaaactagccaggcgtggtggcgcatgcctgtaatcccagctactctggaggctgaggcaggaggattgcttaaa--cccggaaggtggaggttgcaacgaaccgagat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55794798 254 + 59248254 GCAAGTAAAGTCGGAAGAC--GGGGTGggctgggcacggtgaatcgcacctgtaatcccagcacttcgggaggcggaggcgggtgtatcacatgaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaatcagtcgggcgtggtggcgcatgcctgtagtcccagctactctggaggctgaggcaggagaatcgcttaaa--cccgggaggtggaggttgcagtgag------- i macFas5.chr19 I 97 C 0 s papAnu2.chr19 47901950 257 + 51301725 GCAAGTAAAGTCGGAAGACAGggagtgggctgggcacggtgaatcgcacctgtaatcccagcacttcgggaggtggaggcgggtgtatcacatgaggtcaggagttcaagaccagcctggccaacataatcaaaccctgtctctactaaaaatacaaaaatcagccaggcatgg-gacacatgcctgtagtcccagctactctggaggctgaggcgggagaatcgcttaaaaccccggaaggtggaggttgcagtgag------- i papAnu2.chr19 I 97 C 0 s chlSab2.chr6 47606541 254 + 50890351 GCAAGTAAAGTCGGAAGAC--GGAGTGggctgggcatggtgaatcgcacctgtaatcccagcacttcgggaggtggaggtgggtgtatcacatgaggtcaggagttcaagaccagcctggccaacataatcaaaccctgtctctactaaaaatacaaaaatcagccgggcgtagtgacacacgcctgtagtcccagctactctggaggctgaggcaggagaatcgcctaaa--ccccggaggtggaggttgcagtgag------- i chlSab2.chr6 I 97 C 0 s calJac3.chr22_GL285922_random 12085 234 + 138250 GCAAGTAAAGGCAG-------GAAGTG-----------------cacacctgtaatcccagcactttgggaggtggaggcgggtggatcacatgaggtcaagagtttgagaccagcctggtcaacattgtgaa--cccatctctactaaaaatac---atttagctgagcatggtagtgcatgtctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaa--cctaggagatggaggctgcagtgagatgagat i calJac3.chr22_GL285922_random I 4 I 858 e canFam3.chr1 102786576 0 + 122678785 I e rheMac3.chr19 60653933 295 + 64156825 I a score=130651.000000 s hg38.chr19_GL949747v2_alt 650342 83 + 729520 cgcaccattgcactccagcccgggggacag------------------------------aAAAaaaaatgtagctgagcatggtagtgcacgtctgtgatctcagctacttg s panTro4.chr19 59919057 82 + 63644993 cgcaccattgcactccagcct-ggggacag------------------------------aAAAaaaaatgtagctgagcatggtagtgcacgtctgtgatctcagctacttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56816363 82 + 60714840 cgcaccatcgcactccagcct-ggggacag------------------------------aAAAaaaaatgtagctgagcatggtagtgcacgtctgtaatctcatctacttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103360363 84 - 106955855 cgcaccattgcactccagcct-ggggacagaa----------------------------aaaaaaaaatgtagctgagcatggtagtgcacgtctgtaatctcagctacttg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55795052 106 + 59248254 ----ccattgcactttagcctgggggacagaatgagactccgtctcaaaaaa---aaaagaaaaaaaaaTGtagctgagcatggtattgcacgtctgtaatctcggctacttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47902207 109 + 51301725 ----ccattgcacttcagcctgggggacagaatgagactccatctcaaaaaaaataaagaaaaaaaaaatgtagctgagCATGGTAttgcacgtctgtaatctcagctacttg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47606795 109 + 50890351 ----ccattgcacttcagcctgggggacagaatgagactccatctcaaaaagaaaaagaaaaaaaaaaaTGtagctgagcatggtattgcacgtctgtaatctcagctacttg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 12319 858 + 138250 I e rheMac3.chr19 60653933 295 + 64156825 I a score=1055079.000000 s hg38.chr19_GL949747v2_alt 650425 475 + 729520 ggagtctgaggcaggagaatcacttgaacccaggcggtggaggttgcagtgagccaagattgtaatagtccaatgtgttcaccttgcccactgcctagacagagctgattcgtcaagaca-gggaatcgcaatagagaataattcatgcagagctggctctacgagagaccagagttttattattattcaaatcagtgtctcccagcattcaggaagcg-------tttttaaggataacttggtgggtgggtgggaagccagtgagccaggagtgctgtttggtcagggatgaaatcgtgggagccaaagctatcttcttgcac----tcagttcctgagtggaggccaaaagataagatgggccagtttattgatatgggtggtgccagctgatccatcaagtacagggtctgcaagtt-----aaacgctgatcttagaagcagtttagggagggtcacaatcttgtagcctccagctgcatgactcct s panTro4.chr19 59919139 473 + 63644993 ggagtctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccaagattgtaatcgtccaatgtgttcaccttgcccactgcctagacagagctgattcatcaagaca-gggaatcgcaatagagaataattcatgcagagctgtctctacgagagaccagagttttattattattcaaatcagtgtctcccagcattcaggaagag-------tttttaaggataatttggtgggtgggtgggaagccagtgagccaggagtgctgtttggtcagggatgaaatcatgggagccaaagctatcttcttgcac----tcagttcctgagtggaggccaaaagataagatgggccagtttattgatatgggtggtgccagctgatccatcaagtacagggtctgcaaatt-----aagcgctgatcttagaagcagtttagggagggtcacaatcttgtagcctccagctgcatgactc-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56816445 477 + 60714840 ggagtctgaggcaggagaatcgcttgaacccagaaggcggaggttgcagtgagccaagattgtaattgtccaaggtgttcaccttgcccactgcctagacagagctgattcatcaagaca-gggaatcgcaatagagaataattcatgcagagctggctctatgagagaccagagttttattattattcaaatcagtgtctcccagcattcaggaagaagac----tttttaaggataacttggtgggtgggtgggaagtcagtgagccaggagtggtgattggtttgggatgaaatcatgggagccaaagctatcttcttgcac----tcagttcctgagtggacgccaaaagataagatgggccagtttattgatat-ggtggtcccagctgatccatcaagtacagggtctgcaaata-----aagcactgattatagaagcagtttagggagggtcacaatcttgtagcctccagatgcatgactcat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103360447 478 - 106955855 ggagtctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccaagattgtaatcgtccaaggtgttcaccttgcccactgcctagacagagctgattcatcaagaca-gggaatcgcaatagagaatagttcatgcagagctggctctacgagagaccagagctttattattattcaagtcagtgtctcccagcattcaggaagaagaa----tttttaaggataacttggtgggtgggtgggaagccagtgagccaggagtgctgattggtcagggatgaaatcatgggagccaaagctatcttcttgcac----tcagttcctgagtggaggccaaaagataagatgggccagtttattgatatgggtggtgccagctgatccatcaagtacagggtctgcaaatt-----aagcactgatcttagaggcagtttagggagggtcacaatcttgtagcctccagctgcatgactcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60654228 482 + 64156825 ggaggctgaggcaggagaatcgcttgaacccgggagggggaggttgccgtgagccaagattgtaatcacccaaggtgttcaccttgcccactgcctagacagagctgattcatcaggacaggggagttgcattaagaaataattcatgcagagctggctctacgaaagaccagagtt---ttattactcaaatccgtgtctcccagcattcaggtagaagag-ttgttttaagggataactt----ggtgggtgggaagcccgtgggctaggagtgctgattggtcagggatgaaataatgggagtcaaagctatcttctcgaactcagtcagttcctgagtggaggccaaaagataagatgggccagtttattgagatgggtggtgccagctgatccatccagtgcaggttctgcaaattatctcaagcacttaccttagaagcagtttagggagggtcacaatcttgtagcctccagctgcatg--tcct i rheMac3.chr19 I 295 C 0 s macFas5.chr19 55795158 482 + 59248254 ggagtctgaggcaggagaatcgcttgaacccaggaggtggaggttgccgtgagccaagattgtaatcacccaaggtgttcaccttgcccactgcctagacagagctgattcatcaggacaggggagttgcattaagaaataattcatgcagagctggctctacgaaagaccagagtt---ttattactcaaatccgtgtctcccagcattcagggagaagag-ttgttttaagggataactt----ggtgggtgggaagcccgtgggctaggagtgctgattggtcagggatgaaataatgggagtcaaagctatcttctcgaactcagtcagttcctgagtggaggccaaaagataagatgggccagtttattgagatgggtggtgccagctgatccatccagtgcaggttctgcaaattatctcaagcacttaccttagaagcagtttagggagggtcacaatcttgtagcctccagctgcatg--tcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47902316 482 + 51301725 ggagtctgaggcaggagaatcgcttgaacccaggaggtggaggttgccgtgagccaagattgtaatCACCCAAGgtgttcaccttgcccactgcctagacagagctgattcatCAGGACAGGGGAGTTGCATTAGAAAataattcatgcagagctggctctaccagagaccagagtt---ttattactcaaatccGTGTCTCCCAGCATTCAGGGAGAAGAG-ttttttttAGggataactt----ggtgggtgggAAGCCCGTGGGctaggagtgctgattggtcagggatgaaatAATGGGAGTCAAAGCTATCTTCTCGAACTCAGTCAGTTCCTGAGTGGAGGCCAAAAGATAAGATGGGCCAGTTTATTGAgatgggtggtgccagctgatccatcaagtgcaggttCTGCAAATTATCTCAAGCACTTACCTTAgaagcagtttagggagggtcacaATCttatagcctccagctgcatg--tcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47606904 474 + 50890351 ggagtctgaggcaggagaatcgcttgaacccaggaggtggaggttgccgtgagccaagattgtaatcacccaaggtgttcaccttgcccactgcctagacagagctgattcctcaggacaggggagttgcattagaaaa----tcatgcagagctggctctacgagagaccagag--------ttactcaaatcagtgtctcccagcattcagggagaagagtttttttttagggataactt----ggtgggtgggaagcccgtgggctaggagtgctgattggtcagggatgaaataatgggagtcaaagctatcctctcgaactcagtcagttcctgagtggaggccaaaagataagatgggccagtttattgagatgggtggtgccagctgatccatccagtgcaggttctgcaaattatctcaagcacttaccttagaagcagtttagggagggtcacaatcttgtagcctccagctgcatg--tcct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 12319 858 + 138250 I a score=859576.000000 s hg38.chr19_GL949747v2_alt 650900 311 + 729520 aagtcataatttctaatctcgtggctaatgttcgtcctacagggccaatctagtccccaggcaacaaagaggtgtgctttggaaaagggctatcatctttgtttaaacta-----t-------aagtttctcccaa----agttcagcctatgcccaggaatgaaaaaggacagcttggaggttagaagcaaaatggagtcagt-----taaatctctttcactgtctcagtcataattttggaaaggtggtttcaagctggcacaactgcactccaccctaggagacagagcgagaccctgtc------------aaa----aaaaaaaaaaaaaaacaagaaGTGA s panTro4.chr19 59919612 298 + 63644993 ------------------------ctaatgttcgtcctacagggccaatctagtccccaggcaacaaagaggtctgctttggaaaagggctatcgtctttctttaaactataaact-------aagtttctcccaa----agttcagcctatgcccaggaatgaaaaa-gacagcttggaggttagaagcaaaatggagtcagt-----taaatctctttcactgtctcagtcataattttggaaaggtggtttcaagctggcacaactgcactccaccctaggcgacagagcgagaccctgtca-----aaaaaaaaa----aaaaaaaaaaaaaaacaaGAAGTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56816922 317 + 60714840 aaatcataatttctaatctcgtggctactgttcat-ctacagagccaatctagtccccaggcaacaaagaggtctcctttggaaaaggactatcatctttgtttaaactataaact-------aagtttctcccaa----agttcagcctatgcccaggcatgaaaaaggacagcttggaggttagaagcaaaatggagtcagt-----taaatctctttcactgtctcagtcataattttggaaaggtggtttcaagctggcacaactgcactccaccctaggtgacagagcgagaccctgcc----------aaaaa----aaaaaaaaaaaaaaCCAAGAAGTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103360925 308 - 106955855 aaatcataatttctaatctcgtggctaatgttcatcctacagagccaatctagtccccaggcaacaaagaggtctgctttggaaaagggctatcgtctttgtttaaactataaact-------aagtttctcccaa----agttcagcctatgcccaggaatgaaaaaagacagcttggaggttagaagcaaaatggagtcagt-----taaatctctttcactgtctcagtcataattttggaaaggtggtttcaagctggcacaactgcactccaccttaggcgacagaacgagaccctgtc------------aaa----aaaaaaaa--------aagaaGTGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60654710 333 + 64156825 aaatcataatttctaatctcgtggctaatgttagtcctacagagccaatctagtccccaggcaacaaagaggtctgctttgggaaagggctatcgtctttgtttaaaccataaact-------aagtttctcccaa----agttcagcctacacccaggaatgaaaaaggacagcttggaggttacaagtaaaatggagtcagttaagataagtctctttcactgtctcagtcataattttgcaaaagtggtttcaAGCTGACACAactgcactccaccctgggcgacacagcgagaccctgtcaagaacaaaagaaca----aaaaaCAAAAAAAAACAAGAGGTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55795640 326 + 59248254 aaatcataatttctaatctcgtggctaatgttagtcctacagagccaatctagtccccaggcaacaaagaggtctgctttgggaaagggctatcgtctttgtttaaaccataaact-------aagtttctcccaa----agttcagcctacacccaggaatgaaaaaggacagcttggaggttacaagcaaaatggagtcagt-----taagtctctttccctg--tcagtcataattttgcaaaagtggtttcaagctgacacaactgcactccaccctgggcgacacagcgagaccctgtcaagaaaaaaagaaca----aaaaacaaaaaaaaTCAAGAGGTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47902798 332 + 51301725 aaatcataatttctaatctcgtggctaatgttagtcctacagagccaatctagtccccaggcaacaaagaggtctgctttgggaaagggctatcGTCTTTGTTTAAAccataaact-------aagtttctcccaa----agttcagcctacacccaggaatgaaaaaggacagcttggaggttacaAGCAAAATGAAGTCAGTTAAGTtaaatctctttcactgtctcagtcataattttgcaaaggtggtttcaagctgacacaactgcactccaccctgggcgacacagcgagaccctgtcaagaaaaaaagaaca----aaaaacaaaaaaaa-caagaggtGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47607378 337 + 50890351 aaatcataatttctaatctcgtggctaatgttagtcctacagagccaatctagtccccaggcaacaaacaggtctgctttgggaaagggctatcgtctttgtttaaaccataaact-------aagtttctcccaa----agttcagcctacacccaggaatgaaaaaggacagcttggaggttacaagcaaaatggagtcagttaagttaaatctctttcactgtctcagtcataattttgcaaaggtggtttcaagctgacacaactgcactccaccctgggcgacacagtgagaccctgtcaagaaaaacaaaacaaaacaaaaaaaaacaaaaaCAAGCGGTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 13177 329 + 138250 aaaccatgatttctaatcttgtggcta---ctagtcctacagtggcaatacagtccccaggcaagaaagaggtctgcttcgggaaagggctattgtctttgtttaaactataaactgcaaacgaagtttctccccaagttagttcagcccacgcccaggaatgaaaaaggacagcttggagtttagaagcaaaatggagtcagttaaattaaatctctttcactgtctcagtcataattttgcaaaggtggtttcaAgatcacataactgcacttcagcctgggtgacagaaccagaccctgac------------cca----aaaaaaaaaaaaaaaaaaaAAGCGG i calJac3.chr22_GL285922_random I 858 I 10 e canFam3.chr1 102786576 0 + 122678785 I a score=155058.000000 s hg38.chr19_GL949747v2_alt 651211 65 + 729520 AGTCAAGATAGGAGGTAAATTCGGAAGACAGGAAGTGGTGGTAGAAGACAAGAAGTGAAGTCATA s panTro4.chr19 59919910 57 + 63644993 AGTCAAGAT---AGGTAAATTCGGAAGACAGGAAGTGGTGGTAG-----AAGAAGTGAAGTCATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56817239 65 + 60714840 AGTCAAGATAGGAAGTAAAGTCCGAAGACAGGAAGTGGTGGTAGAAGACAAGAAGTGAGGTCATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103361233 65 - 106955855 AGTCAAGATAGGAAGTAACATCGGAAGACAGGAAGTGCTGGTAGAAGACAAGAAGTGAGGTCATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60655043 65 + 64156825 AGTCAAGATAGGAAGGAAAGTCGGAAGACACCAAGTGGAGGTAGAAGACTAGAAATGATGTCATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55795966 65 + 59248254 AGTCAAGATAGGAAGGAAAGTCGGAAGACACCAAGTGGAGGTAGAAGACTAGAAATGATGTCATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47903130 65 + 51301725 AGTCAAGATAGGAAGGAAAGTCGGAAGACACCAAGTAGAGGTAGAAGACTAGAAATGATGTCATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47607715 65 + 50890351 AGTCAAGATAGGAAGTAAAGTCGGAAGACACCAAGTGGCGGTAGAAGACTGGAAATGAGGTCATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 13516 65 + 138250 AATCAAGACAGGAAGTAAAGTCAGCAGACAGGAAGTGATGGGAGAAAACAGGAAGTGAGGTCGTA i calJac3.chr22_GL285922_random I 10 T 75 e canFam3.chr1 102786576 0 + 122678785 I a score=1542446.000000 s hg38.chr19_GL949747v2_alt 651276 576 + 729520 CAGGAAGTAAAGTCAGAAGACAGGAAGTGAAGTAAGAAGACAGGAAGTGGTTGTAGAAGACAGGAAGTGAGGTCATACAGGAAGT-AAAATCAGAAGACAGGAAGTGACGTCAAACCAGGATTTGCAGTC-GGAGGCAGGCAAGAAGTGAAATCAGAAGACGGGAAGTGGCTGAGGGGAAC--GTCTTTTCTCTCTCCTGCTCAGCCCGAAGTGAACAGGTAGCATCAGGTGTGCCATTTCAGTGACTGGGCACAGCCCAGGCACCCACATCTCTCTGCAGCGCCTATTCTTGGAACACCAGAGACCTCTACACTATTTTCTGTTGCTTTTTTCCTTCATTTTCAGAGATGAGA-TCCTGGATTGAATGAC------TACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTATCTTGTTCTTTAATTTTGGTGTTGTTTGTTATGACT-------TGTTAGCCGTCTAGCACTCATAGCTTTGCATTTCCACTCTGCATTACTTGTATTTTTATTATTTTGTGATATTCGTAATAAT---TTATTATAAAACTGTGTTATT--TTTGGATATTTTTAAGTTAAAATGCGATTTTTT s panTro4.chr19 59919967 582 + 63644993 CAGGAAGCAAAGTCAGATGACAGGAAGTGAAGTAAGAAGACAGGAAGTGGTTGTAGAAGACAGGAAGTGAGGTCATACAGGAAGT-AAAATCAGAAGACAGGAAGTGACATCAAACCAGGACTTGCAGTC-GGAGGCAGGCAAGAAGTGAAATCAGAAGACAGGAAGTGGCTGAGGGGAAC--GTCTTTTCTCTCTCCTGCTCAGCCCGAAGTGAACAGGTAGCATCAGGTGTGCCATTTCAGTGACTGGGCACAGCCCAGGCACTCACATCTCTGTGCAGTGCCTATTCTTGGAACACCAGAGACCTCTACACTATTTTCTGTTGCTTTTTTCCTTCATTTTCAGAGATGAGA-TCCTGAATTGAATGACTTGAATTACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTATCTTGTTCTTTAATTTTGGTGTTGTTTGTTATGACT-------TGTTAGCCGTCTAACACACATAGCTTTGCATTTCCACTCTGCATTACTTGtatttttattattttgtaatatttgtaataat---ttattataaaaCTGTGTTATT--TTGGGATATTTTTAAGTTAAAATGCGATTTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56817304 557 + 60714840 CAGGAAGCAAAGTCAGAAGACAGGAAGTGAAGTA--------------------AGAAGACAGGAAGTGAGATCATACAGGAAGTAAAAATCAGAAGACAGGAAGTGACGTCAAACCAGGA-TTGCAGTC-GGAGGCAGGCAAGAAGTGAAATCAGAAGACAGGAAGTGGCTAAGGGGAAC--GTCTT-----TCTCCTGCTCAGCCCGAAGTGAACAGGTGGCATCAGGTGTGCCATTTGAGTGACTGGGCGCAGCTCAGGCACCCACATCTCCCTTCAGCGCCTATTCTTGGAACACCAGAGACCTCTACACTATTTTCTGTTGCTTTTTTCCTTCATTTTCGGAGATGAGA-TCCTGGATTGAATGACTTGAATTACTGTGGAAAGCGATTGACCAAGGTAAGTCACAACTATCTTGTTCTTTAATTTTGGTGTTGTTTGTTATGACT-------TGTTAGCCGTCTAGCACACATAGCTTTGCATTTCCACTCTGCATTACTTGtatttttattattttgtaatatttgtaataat---ttattataaaaCTGTGTGATT--TTTGGATATTTTTAAGTTAAAATGCGGTTTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103361298 581 - 106955855 CAGGAAGCAAAGTCAGAAGACAGGAAGTGAAGTA---AGACAGGAAGTGGTTGTAGAAGACAGGAAGTGAGGTCATACATCAAGT-AAAATCAGAAGACAGGAAGTGACGTCAAACCAGGACTTGCAGTC-GGAGGCAGGCAAGAAGTGAAATCAGAAGACAGGAAGTGGCTGAGGGGAAC--GTCTTTTCTCTCTCCTGCTCAGCCTGAAGTGAACAGGTAGCATCAGGTGTGCCATTTGAGTGACTGGGCACAGCTCAGGCACCCACATCTCCCTCCAGCGCCTATTCTTGGAACACCAGAGACCTCTACACTATTTTCTGTTGCTTTTTTCCTTCATTTTCAGAGATGATA-TCCTGGATTGAATGATTTGAATTACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTATCTTGTTCTTTAATTTTGGTGTTGTTTGTTATGACT-------TATTAGCCGTCTAGCACACATAGCTTTGTATTTCCACTCTGCattacttgtatttttattattttgtaatatttgtaataatttattattatAAAACTGTGTTATT--TT-GGATATTTTTAAGTTAAAATGCGATTTTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60655108 576 + 64156825 TAGGAAGTAAAGTCAGAAGACAGGAAGTGAAG--------------------GTAGAAGACAGGAAGTGAGGTCATACAGGAGGC-AAAGTCAGAAGACAGGAAGTGATGTCAACCCAGGAAGTGCAGTC-GAAGGTAAGCAAGAAGTGAAGTCAGGAGACAGAAAGTGGCCGGGAGGAACTTGTCTTTCCCCTCTCCTCCGAAGCCCCAAGTGAACAGGTAGCGTCAGGTGTGCCCTTTGAGTGACTGGGCACAGCTCAGGCACCCACATCTCCCTCCAGCGCCTATTCTTTGAACACCAGAGACCTCTGCACTATTTTCTGTTGTTTTTTTCCTTCATTTTCCGAGACGAGG-TCCTGGATTGAGTGGCTTGAATTACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTATCTTGTTCTTTAATTTTGTTGTTGTTTGTTATGACTAATTGAATGTTAGCCTTCTAGCACACATAGCTTTGCATTTCCACTCTGCACTACTTGTATTTTTATTATTTTGTAGTATTTGTAATACTTTGTTATTTTAAAACTGTGTTATTAGTTTGGATATTTTGAAGTTAAAATGTGATTTTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55796031 576 + 59248254 TAGGAAGTAAAGTCAGAAGACAGGAAGTGAAG--------------------GTAGAAGACAGGAAGTGAGGTCATACAGGAGGC-AAAGTCAGAAGACAGGAAGTGATGTCAACCCAGGAAGTGCAGTC-GAAGGTAAGCAAGAAGTGAAGTCAGGAGACAGAAAGTGGCCGGGAGGAACTTGTCTTTCCCCTCTCCTCCGAAGCCCCAAGTGAACAGGTAGCGTCAGGTGTGCCCTTTGAGTGACTGGGCACAGCTCAGGCACCCACATCTCCCTCCAGCGCCTATTCTTTGAACACCAGAGACCTCTGCACTATTTTCTGTTGTTTTTTTCCTTCATTTTCCGAGACGAGG-TCCTGGATTGAGTGGCTTGAATTACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTGTCTTGTTCTTTAATTTTGTTGTTGTTTGTTATGACTAATTGAATGTTAGCCTTCTAGCACACATAGCTTTGCATTTCCACTCTGCACTACTTGTATTTTTATTATTTTGTAGTATTTGTAATAATTTGTTATTTTAAAACTGTGTTATTAGTTTGGATATTTTGAAGTTAAAATGTGATTTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47903195 574 + 51301725 TAGGAAGTAAAGTCAGAAGACAGGAAGTGAAG--------------------GTAGAAGACAGGAAGTGAGGTCATACAGGAGGC-AAAGTCAGAAGACAGGAAGTGATGTCAATCCAGGAAGTGCAGTC-GAAGGTAAGCAAGAAGTGAAGTCAGGAGACAGAAAGTGGCCGGGAGGAACTTGTCTTTCCCCTCTCCTCCGAAGCCCCAAGTGAACAGGTAGCGTCAGGTGTGCCCTTTGAGTGACTGGGCACAGCTCAGGCACCCACATCTCCCTCCAGCGCCTATTCTTTGAACACCAGAGACCTCTGCactattttctgttgcttttttccttcattttccgaGATGAGG-TCCTAGCTTGAATGGCTTGAATTACCATGGAAAGTGATTGACCAAGGTAAGTCACAACTATCTTgttctttaattttgttgttgtttgttatgACTAATTGAATGTTAGCCTTCTAGCACACATAGCTTTGCATTTCCACTCTGCActacttgtatttttattattttgtagtatttgtaataatttgttattttaaaac--tgttattagtttgGATATTTTGAAGTTAAAATGCGATTTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47607780 576 + 50890351 CAGGAAGTAAAGTCAGAAGACAGGAAGTGAAG--------------------GTAGAAGACAGGAAGTAAGGTCATACAGGAGGC-AAAGTCAGAAGACAGGAAGTGATGTCAATCCAGGAAGTGCAGTC-GAAGGTAGGCAAGAAGTGAAGTCAGGAGACAGAAAGTGGCCCGGAGGAACTTGTCTTTCCCCTCTCCTCTGAAGCCCCAAGTGAACAGGTAGCGTCAGGTGTGCCCTTTGAGTAACTGGGCACAGCTCAGGCACCCACATCTCCCTCCAGCGCCTATTCTTTGAGCACCAGAGACCTCTGCACTATTTTCTGTTGCTTTTTTCCTTCATTTTCCGAGATGAGG-TCCTGGATTGAATGGCTTGAATTACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTATCTTGTTCTTTAATTCCGTTGTTGTTTGTTATGACTAATTGAATGTTAGCCTTCTAGCACACATAGCTTTGCATTTCCACTCTGCACTACTTGTATTTTTATTATTTTGTAGTATTTGTAATAATTTGTTATTTTAAAACTGTGTTATTAGTTTGGATATTTTGAAGTTGAAATGCGATTTTTT i chlSab2.chr6 C 0 I 982 s calJac3.chr22_GL285922_random 13506 574 + 138250 CAGGAAGTGAAATC--AAGACAGGAAGTAAAGTCAGCAGACAGGAAGTGATGGGAGAAAACAGGAAGTGAGGTCGTACAGGTAGT-AAAGTCTGCAGACAGGAAGTGACGTTTACACCGGAAGTATTGTCAGAGGGCAGGCAGGAAGTGAAGTCAGAAGCCAAGAAGTGGCCAGGGAGAACTTGTCTTTCCCCTCTCCTCCTCAGCCCCAAGTGAAAAGGTAGCATCAGGTGTGCCATTTGAGTGACTGGACACAGCTCAGGCATCCACATCTCCCTTCAGC-------------CCATCAGAGACCTCTCCACTACCTTCTTTTGCTTTTTTCCTTCA-CTTCAGAGATGAAATTCCCAGATTGAACGGCTTCAATTACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTACCTTGTTTTTTAATTATGTT----TTTGTTGTGACTAATTGAGTTTTAGCCTTTTAGCACACATAGCTTTGCATTTCCACTCTGCAGTACTTGCATTTTTATTACTTTGTAATGTTTGTAATGTG---TTATTATAAAGCTGTGTTATTGGTTTGG-CATTTTGAAGTTAAAATGTAATTTTTA i calJac3.chr22_GL285922_random T 75 C 0 e canFam3.chr1 102786576 0 + 122678785 I a score=9821.000000 s hg38.chr19_GL949747v2_alt 651852 6 + 729520 AACTAA--- s panTro4.chr19 59920549 6 + 63644993 AACTAA--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56817861 6 + 60714840 AACTAA--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103361879 6 - 106955855 AACTAA--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60655684 6 + 64156825 AACTAA--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55796607 6 + 59248254 AACTAA--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47903769 6 + 51301725 AACTAA--- i papAnu2.chr19 C 0 I 1798 s calJac3.chr22_GL285922_random 14080 9 + 138250 AACTGCAAA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e chlSab2.chr6 47608356 982 + 50890351 I a score=3893.000000 s hg38.chr19_GL949747v2_alt 651858 2 + 729520 GT s panTro4.chr19 59920555 2 + 63644993 GT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56817867 2 + 60714840 GT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103361885 2 - 106955855 GC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60655690 2 + 64156825 GT i rheMac3.chr19 C 0 I 845 s macFas5.chr19 55796613 2 + 59248254 GT i macFas5.chr19 C 0 I 976 s papAnu2.chr19 47905573 2 + 51301725 GC i papAnu2.chr19 I 1798 C 0 s calJac3.chr22_GL285922_random 14089 2 + 138250 GT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e chlSab2.chr6 47608356 982 + 50890351 I a score=781.000000 s hg38.chr19_GL949747v2_alt 651860 1 + 729520 G s panTro4.chr19 59920557 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56817869 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103361887 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55797591 1 + 59248254 A i macFas5.chr19 I 976 C 0 s papAnu2.chr19 47905575 1 + 51301725 A i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 14091 1 + 138250 G i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e chlSab2.chr6 47608356 982 + 50890351 I e rheMac3.chr19 60655692 845 + 64156825 I a score=472153.000000 s hg38.chr19_GL949747v2_alt 651861 162 + 729520 GCAGTATGCAAAGCAAGTGGTTCAGAACTC-TCCCCCATTAATAAGTCTTCTCTCCTGAAAGAAACAATTTTGAGACTTCCTGTTCTTAATTCTGTTTAACAGCATACTTCTAAAAG-AAAAAGTGTATACTGTTATTATTTATTGTGTTACAAAAATATACAC s panTro4.chr19 59920558 162 + 63644993 GCAGTATGCAAAGCAAGTGTTTCAGAACTC-TCCCCCATCAATACGTCTTCTCTCCTGAAAGAAACAATTTTGAGACTTCCTGTTCTTAATTCTGTTTAACAGCATACTTCTAAAAG-AAAAAGTGTATACTGTTATTATTTATTGTGTTACAAAAATATACAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56817870 157 + 60714840 GCAGTATGCAAAGCAAGTGTTTCAGAACTCTTCCCCCATCAATAAGTCTTCTCTCCTGAAGGAAACAATTTTGAGACTTCCTGTTCTGAATTCTGTTTAACAGCATACTTCT-------AAAAGTGTATACTGTTATTATTTATTGTGTTACAAAAATATACAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103361888 162 - 106955855 GCAGTATGCAAAGCAAGTGTTTCAGAAGTC--TCCCCATCAATAAATTTTCTCTCCTGAAGGAAACAATTTTGAAACTTCCTGTTCTTAATTCTGTGTAACAGCATACTTCTAAAAGAAAAAAGTGTATACTGTCATTATTTATTGTGTTACAAAAATATACAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60656537 162 + 64156825 GCAGTATGCAAAGCAGGTGTTTCAGAACTC-TCTCCCGTCAGTAAGTCTTCTCTCCTGAAGGAAACAATTTTGAGACTTCCTGTTCTTAATTCTGTTTAACAGCATACGTCTAAAAG-AAAAGATGTATACTGTTATTAtttattgtgttacaaaaatatacac i rheMac3.chr19 I 845 C 0 s macFas5.chr19 55797592 162 + 59248254 GCAGTATGCAAAGCAGGTGTTTCAGAACTC-TCTCCCGTCAGTAAGTCTTCTCTCCTGAAGGAAACAATTTTGAGACTTCCTGTTCTTAATTCTGTTTAACAGCATACGTCTAAAAG-AAAAGATGTATACTGTTATTAtttattgtgttacaaaaatatacac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47905576 162 + 51301725 GCAGTATGCAAAGCAGGTGTTTCAGAACTC-TCTCCCATCAGTAAATCTTCTCTCCTGAAGGAAACAATTTTGAGACTTCCTGTTCTTAATTCTGTTTAACAGCatacttctaaaag-aaaagatgtatactattattatttattgtgttataaaaatatacac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47609338 162 + 50890351 GCAGTATGCAAAGCAGGTGTTTCAGAACTC-TCTCCCATCAGTAAGTCTTCTCTCCTGAAGGAAACAATTTTGAGACTGCCTGTTCTTAATTCTGTTTAACAGCATACGTCTTAAAG-AAAAGATGTATACTGTTATTAtttattgtgttacaaaaatatacac i chlSab2.chr6 I 982 C 0 s calJac3.chr22_GL285922_random 14092 162 + 138250 GCAGTATGCAAAGCAAGTGTTTGAGAACTT-TCCCCCATCAATAAGTCTTCTCCCCTAAAGGAAACAGTTTTGAAACTTCCTGTTCTTAATTCTGTTTAACAGCTTACTTCTAAAAG-AAAACGTGTATGCTGTTATTAtttattttgttacaaaaatatacat i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I a score=845.000000 s hg38.chr19_GL949747v2_alt 652023 1 + 729520 G s panTro4.chr19 59920720 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56818027 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103362050 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47905738 1 + 51301725 a i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47609500 1 + 50890351 g i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C a score=4820.000000 s hg38.chr19_GL949747v2_alt 652024 5 + 729520 CACCT s panTro4.chr19 59920721 5 + 63644993 CACCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56818028 5 + 60714840 CACCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103362051 5 - 106955855 CACCT i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47609501 5 + 50890351 cacct i chlSab2.chr6 C 0 I 422 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C a score=177412.000000 s hg38.chr19_GL949747v2_alt 652029 340 + 729520 Ttcatgcacgtccgtgtgaagagaccaccaaacaggctttgtgtgagcaataaagcttttaatcacctgggtgcaggtgggctgagtctgacaagagagtcagcgaagggggataggggtggggccgttttataggatgtgggtaggtaaaggaaaattacagtcaaaggggggttgttctctggcgggcagagtcggggtcataaggtgctcagtaggggagcttttgagccagga-tgagccaggagaaggaatttcacaagacaatgtcatcagttaaggcaggaacaggccattttcgcttcttttgtggtggaatgtcatcagttaaggcacgaac s panTro4.chr19 59920726 338 + 63644993 Ttcatgcacgtccgtgtgaagagaccaccaaacagactttgtgtgagcaataaagcttttaatcacctgggtgcaggtgggctgagtccgaaaagagagtcagcgaagggggac--gggtggggccattttataggatttgggtaggtaaaggaaaattacagtcaaaggggggttgttctctggcgggcagagtgggggtcataaggtgctcagtaggggagcttttgagccagga-tgagccaggagaaggaatttcacaagacaatgtcatcagttaaggcaggaacaggccattttcgctttttttgtggtggaatgtcgtcagttaaggcaggaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56818033 339 + 60714840 Ttcatgcacgtccgtgtgaagagaccaccaaacaggctttgtgtgagcaataaagcttttaatcacctgggtgtaggcaggctgagtccgaaaagagagtcagcgaagggagat-ggggtggggccgttttatgggatttgggtaggtaaaggaaaattacagtcaaaggggggttgttctctggcgggcagagtgggggtcacaaggtgctcagtgggggagcttttgagccagga-tgagccaggagaaggaatttcacaagacaatgtcatcagttaaggcaggaacaggccattttcacttcttttgtggtggaatgtcatcagttaaggCAGGAAC i ponAbe2.chr19 C 0 I 48100 s nomLeu3.chr10 103362056 337 - 106955855 Ttcatgcgcgtccgtgtgaagagaccaccaaacaggctttgtgtgggcaataaagcttttaatcacctgggtgcaggtgggctgagtccgaaaagagagtcatctaagggagat-ggggtggggccgttttataggatttgggtaggtaaaggaaaattacagtcaaaggggg---gttctctggcgggcagagtgggggtcacaaggtactcagtaggggagcttttgagccaggattgagccaggagaaggaatttcacaagacaatgtcatcagttaaggcaggaacaggccattttcacttcttttgtggtggaatgtcatcagttaaggcaggaac i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C a score=73474.000000 s hg38.chr19_GL949747v2_alt 652369 293 + 729520 cggccatctggatgtgtacgtgcaggtcacaggggatatgatggcttagcttgggctcagaggcctgacattcctgtcttcttatattaataagaaaaataaaatgaaataggggtaaagtgttgggacagcaaaaatttttggggg-tggtatggagagataatgggtgatgtttctcaaggctgctttgagcaggattaggggcggcgtgggaacctaaagtgggagcgattaagctgaaggaagattttgtggtaaggggtgacattgtgggattgttaaaagaaacattt s panTro4.chr19 59921064 294 + 63644993 cggccatctggttgtgtacgtgcaggccacaggggatatgatggcttagcttgggctcagaggcctgacattcctgtcttcttatattaataagaaaaataaaatgaaataggggtaaagtgttgggacagcgaaaatttttgggggatggtatggagagataatgggcgatgtttctcagggctgcttcgagcaggattaggggcggcgtgggaacctaaagtgggagcgattaagctgaaggaagattttgtggtaaggcgtgatattgtggggctgttagaagaaacattt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103362393 291 - 106955855 cggccatctggatgtgtacttgcaggtcacaggggatatgatggcttagcttgggctcagaggcctgacattcctgtcttcttatattaataagaaaaataaaacgaaatagtggtaaagtgttgggacggcaaaaattttgggcgg-tggtatggagagataatgggagatgtttctcagggcttcttcgagtgggattaggggcggcgtgcgaacct-gagtgggagcgattaagctgaaggaagattttgtggtaaggggtgatattgtgggactgtta-aagaaacattt i nomLeu3.chr10 C 0 I 100 e canFam3.chr1 102786576 0 + 122678785 I e ponAbe2.chr19 56818372 48100 + 60714840 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C a score=153925.000000 s hg38.chr19_GL949747v2_alt 652662 1768 + 729520 gtcatttagaattattggtgatggcctggatacagttttgtatgaattgaaaaactaaagggaataaggaaaggagaaaaacaggtattaaaggtctaagaattgggacgactcaggacatctaattagaaagtgcctaaggaggttcagcatagccttgccagcaaagat-tatttatttattttaagagttaacagtggcggtatggggatagtaccaggagataccagctgtgctggcttggagaaacagtgtaaactggcagtgtaaacaagagcagggcatgtgtgagtagttgagaacggtgaataggagtatgactagacagaagatagtagggatgacaagttttttggggcacaatctaagtTggtctggtgtctggaatgagactggggcctaataaaaaggagtgtctacacaggagcttaaatgggctgtatcttgtagcattccaaggacaggcctgaattctggaagcgaaaatggtaaaagtattgtccagtcctttttaagttggtggctgagcttggtgaggtgtgtttttaatagaccattagtctgtcactgaatactaagagcctgaaaaaatgcttggctgatttgactaataaaggctggtctgttagcagactgtatagaggtgggaaggctgaactgaggaattttgtctgacagaagggaatgacaaggctaaactgaagaattatgtctgacagaagggaagaaatgactgcggtggccttctcagaccctgtaggaaaggactgtacttacccagtgaaagtgtctacctagactaagaggtattttagttatcttactcggggcatgttgagtaaagctaatttgccagtcctgggcgggggcaaatccttgagcttgatgtgtagggaagggagggggcctgaataatccatgaggagtagtagaatagctgatgcaacactgagaagtgatttctttgaggatagatttccacaatggaaaggaaatgagaggttctaagaggctggctagtggcttgtaCcatagcatagcctgcctttgctggtgtgtggcgattaggcctggtggaaccgccatcaataaactaagtgtgatcagggtgagaaacagggaagaaggaaatgtggggaaatggggtgaacgtcaggtggatcagagagatgcagtcatgggggtcaggtgtggtatctggaataatgtgggaggccagattgaagtccgggccaggaacaatggtaattgtgggacttaacaaagagtgagtacagctgaaggagccagggagcagaaagtatatgcatcaggtgtgagtaagaaaatagattttggaaattatgagagctgtagagagtgagttgagcatagtttgtgattttgagggcctctaaaagtattaaagcagcggcagccacagcacgcagatatgagggctaggctaaaacagtaaggtcaagttgtttggacagaaaggctacagggtgtggtcctggctcttgtgtaagagttctgaccgcgctaaccatgcctaggaaggaaaggagttgttgttttgtagaaggtgctggggcttgagagatcagtcagacacgatcagcagggagagcacgtgtgtttttatgagaattatgccgagataggtaacagatgaggatgaactttgggcttgactgaagtaatgggggctgtctgtgaaaccttgcagcagtacagcccaggtaatttgctgagcctaatgggtgtcagggtcagtccaagtgaa s panTro4.chr19 59921358 1753 + 63644993 gtcatttagaattattggtgatggcctggatgcagttttgtacgaattgaaaaactaaatggaataagagaaggtgaaaaacaggcattaaaagtctaagaattgggaggacctaggacatctaattagagagtgcctaaggaggttcagcatagtcctgccagcaaagatgtatttatttattttaagagttaagagtggcggtttggggatagtaccaggagatatcagctgtgctggcctggagaaa-------------cagtgtaaacaagagcagggcatgtgtgagtagttgataacagtgaataggagtatgactagacagaagataggagggatgacaagttttttggggcacagtctaagtTGGTTtggtgtctggaatgagactggggcctaataaaaaggagtgtctatacaggagcttaaatgggctgtatcttgtagcattccgaggacaggcctgaattctggaagcgaaaatggtaaaagtattgtccagtcctttttaagttggtggctgagcttggtgaggtgtgtttttaatagaccattagtctgtcactgaatactaagagcctgaaaaaatgcttggctgatttgactaataaaggctggtctgttatcagactgtatagaggtgggaaggctgaactgaggaattatgtctgacagaagggaatgacaaggctaaactgaagaattatgtctgacagaagggaagaaatgactgcggtggccttctcagaccccataggaaaggactgtacttatccagtgaaagtgtctacctagactaagaggtattttagttatcttactcgaggcatgttgagtaaagctaatttgccagtcctgggtgggggcaaatccttgagcttgatgtgtagggaagggagggggcctgaataatccctgaggagtagtagaatagcagatggaacactgagaagtgatttctttgacgatagatttccacgatggaaaggaaatgagaggttctaagaggcgggctagtggcttgtaCTatagcatagcctgcctttgctggtgtgtggcgattaggcctggtggaaccaccatcaataaatcaagcgtgatcagggtgagaaacagggaagaaggaaatgtggggaaatggggtgaatgtcaggtggatcagagagatatagtcatgggggtcaggtgtggtatctggaataatgtgggaggccagactgaggtccggggcaggaacagtggtaattgtgggacttaacaaagagtgagtacagctgaaggagccggggagcagaaagtatatgcgtcaggtgtgagtaagaaaatagattttggaaattatgagagctgtagagagtgagttgagcatagtttgtgattttgagagcctctaaaagtattaaagcaccggcagctgctgctcacagacatgagggctagcctaaaacagtaaggtcaagttgtttggacagaaaggctatagggtgtggtcctggcttttgtgtaagaattccgaccgcgctaaccatgcctaggaaggaaagga---gttgttttgtagaaggtgctggggtttgagagatcagtcagacacgatcagcagggagagcacgtgtgtttttatgagaattatgccaagataggtaacagatgaggatgaactttgggcttgactgaagtaatgggggctgtctgtgaagccttgcagcagtacagcccaggtaatttggtgagcttaaagggtgtcagggtcagtccaagtgaa i panTro4.chr19 C 0 I 10 e canFam3.chr1 102786576 0 + 122678785 I e ponAbe2.chr19 56818372 48100 + 60714840 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C a score=0.000000 s hg38.chr19_GL949747v2_alt 654430 913 + 729520 agcgaagagaggctgggacgaggggtgcaggggaatagtgaaaaaagcatctttaagatcaagcatggaatagtgagttgtggaggaaggtattgaggacaaaagagtgtaggggttgggcaccacagggtgcataggcaaaacaatttgataaggcgcagatcctgaactaatctgtaagacttttccggtttttggacaggtaaaatgggggaattgtaaggagagtttataggttttagaagcccatgctatagcaggcgagtgataacaggctttaatccttttaaagtgtgctgtgggatgggatattggcattgagcagggtaagggtgattaggttttaatgggatggtaacgggtatgtgatcagttgccagggaaggagtagagatgtcccatacttgtgggttaaggtgggggaataggagaggaagacgcgaaggaggctttgggttgaggagaagggtggcaatgagatgcggctgtagtccaggaatagtcagggaagcagataatttggttaaaatatctcggcctaataagggaactgggcaggtggggataactaaaaaagagtgcataaaagagtgttgtccaagttggcaccagagtgggggagttttcaggggtttagaagcctggccgtcaatacccacaacagttatggaggcaagagaaacaggcccttgaaaagaaggtaatgtggagtgggtagcctccgtattgactaaggcgacggacttaccttccaccgtgagtgttacccgaagctcggcatccgtgatggtctacagagcttccgaggcgattgggcagcatcagtcttcagccgctaagccgagaaggagtcagagagccttgggccagagttccaggggctctgggagtggctgccaggtgagttgaacag e canFam3.chr1 102786576 0 + 122678785 I e ponAbe2.chr19 56818372 48100 + 60714840 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C e panTro4.chr19 59923111 10 + 63644993 I a score=13937.000000 s hg38.chr19_GL949747v2_alt 655343 154 + 729520 tccgatttccagtggggtcccgcacagatgggacacggcttaggaggaatcctgggctgcaggcattccttggcctggtggtcagatttctggcacttgtagcaagctcctgggggaggaggttctggaggaacgcctggccgctgcggttcag s ponAbe2.chr19 56866472 153 + 60714840 tccgatttccagtggggtcctgcacagatgggacacggcttaggaggaatcctgggctgcaggcattccttg-cctggtggtcagatttctggcacttgtagcaagctcctgggggaggaggttctggaggaacgcctggccactgcggtttag i ponAbe2.chr19 I 48100 I 11 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C e panTro4.chr19 59923111 10 + 63644993 I a score=0.000000 s hg38.chr19_GL949747v2_alt 655497 5 + 729520 ttccc e canFam3.chr1 102786576 0 + 122678785 I e ponAbe2.chr19 56866625 11 + 60714840 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C e panTro4.chr19 59923111 10 + 63644993 I a score=163881.000000 s hg38.chr19_GL949747v2_alt 655502 1997 + 729520 ttcttgtgtgctggagatgtggctggggtttgtctcacagtggaggcaaggaattgcaacttttttctattattgtacaccttgaaggcgaggttaattaaatcctgttgtggggtttgagggccggaatttaattttt-ggagttttatttaatgtcgggagcagattgggtaataaaatgtgtattaagaataagacggccttttgacttttaagggtctagggctgtaaagcttctcagggttgctggcgaacgagccatgaattgggctggatttttatatttgatgaaaaagagcctaaacactatctgatttgggataaagaaaaaggagcattaaccttgactatgcctttagctccagccacctttctaagagtaaattgctgggcaggtggaagagggctagtcactgaacgaaactgtaagctggaccaggtgtggggaggggaggtgataaaaagataatacggtggaggagcggaggctgaggaagaattgggacctagctcagcctggggaggaggg-agaggtcagacgggtctgtagaaaaggaagattagaaagactcagcgacgcttggggttgagactgaggggacaggcaggagggaaagaaggaagatttgggacgagttgcactgggcacagagactaggaagggactgatgtgtaaaagaatgcctggacgtcaggcacctcagaccgtttgcccattttacgacaagaattatttagatcttgcaggatggaaaaattgaaagtgctgttttctggctatttggaactgctgtccagtttgtattggggtcaagcggcattgcagaagaaaataaggcatttaggttttaggtcaggtgtgagttgaagaggttttaagtttttgagaacacaggccaagggagagaaggaggaggaatggagggtggaaggttgcccatagtgaaggaggcaagcctagagaaaagagagagtagagacacggagggaaggggttcgggagttcttaccttccagaaaagcgggaaaggggttgg-------------------ggcatggatataaggggttggggcacagagataagaggttggggcatggaaataagggatcagggtgcagagata-------------------------------------------cgaggttggggtacttgcccctc---tagaaaagcgggacttgccgctaagagtgaaggagaaggggttgggggtttcttgccccccagaaaggtggagaaggggtagagacatggagaggaggggttggggaacttgccccttccccagaaaagtgggacttgccactaagggtgaaggaccaaggcaggcatccctgcgtgatctgacacctctgaagcgtgggtatataatcagagaggcgtccctgcaatgattaaacgccaagggaaggctgccttccctagtccgtgaccggcgccggagttttgggtccacagataaaacgtgtctcctttgtctctaccagaaaatgaaaggaattgaaattaagagaagggagagattgaagagtggaaaggagaaagtggttgagggacagtgagagaggttggagaagagagtaagaagaggtcgcttacccaatttaaacttggtgagatgttccttgggctggtgggtctgaggacctgaggtcgtaggtggatctttttcacagagcaaagagcaaga---caggggattgatctcccaagggaggtcccccgatccaagtcacggcaccaaaTTtcatgtgcgtccatgtgaagagaccaccaaacaggctttgtgtgagcaataaagcttttaat--cacctgggtgcaggtgggctgagtccgacaagagagtcagcgaagggggat-ggggtggggccgttttataggatttgggtaggtaaaggaaaattacagtcaaagcggggttgttctctggcgggcagagtgggggtcacaaggtgctctgtaggggagcttttgagccaggatgagccaggagaaggaatttcacaagacaatgtcatcagttaaggca s ponAbe2.chr19 56866636 2059 + 60714840 ttcttgtgtgctggaggtgtggctggggtttgtctcacagtggaggcaaggaattgcaacttttttctattattgtacaccttgaaggtgaggttaattaaatcctgttgtggggtttgagggccggaatttaattttttggagttttatttaatgtcgggagcagattgggtaataaaatgtattttgagaataagacggccttttgaccttttagggtctagggctgtaaag--tgtcagggttgctgccgaacaagtcatgaactgggctggatttttatatttgatgaaaaagagcctaaacgctatctgatttgggataaagaaaaaggagcatgaaccttgactatgcctttagctctagccacctttttaagagtaaattgctgggcaggtgggggagggctagtcacagaacgaaac------ccggacccggtgtgaggaggggaggtgataaaatgattatagggtggaggagcagaggctgaggaagaagtgggacctacctcagcctggcaaggaggggagaggtcagatggatctgtagaaaaggaagattagaaagactcagcgacgcttggggttgggactgaggggacaggcgggagggaaagaaggaagatttgggacgagttgcgctgggcacagagactagggagggactcatatgtaaaagaatgcctggacatcaggcatctcagactgtttgcccattttacgacaagaattatttacatcttgcaggatggaaaaattgaaagtgtcattttccggctatttggaactactgtcaggtttgtattggggttaagcggcgttgcagaagaaaataaggcatttaggttttaggacaggtgtgacttgaagaggttttaagtttttgagaacacaggccaagggaga--agaaggaggaatggagggtggaaggttgcccatagtgaaggaggcaagcacagagaaaagagagagtagagacacggagggaaggggtttgggggttcttaccctccagaaaagcaggaaaggggttggtgcagagataagaggtcggggcacggaaataagggattggggcacagagataagaggttggggcatggaaataagggattggggtgcagagatataagaggttggggcacggaaataagggattggggcacgagatacgaggttggggtacttgtccctcctgtggaaaagcgggacttgccgctaagagtgaaggagaaggggttgggggtttcttgccccccagaaaggtggagaaggggtagagacacggagagaaggggctggggtacttgccctttccccagaaaagcgggacttgccgctaagggtgaaggaccaaggcaggcatccctgcgtggtctgatgcctctgaaacctgggtgaataatcagagaggcgtccctgcagtgattaaacaccaagggaaggctgccttccc-agtccgtgaccggcgccggaggtttgggtccacagataaaacgtgtctcctttgtctctaccagaaaatgaaaggaattgaaattaagagaagggagagattgaagagtggaaaggagaaagtggttgagggacagtgagagaggttggagaagagagtaagaagaggccgcttacctaatttaaacttggtgagatgtttcttgggctgataggtctgaggacccgaggtcgtaggtggatctttttcacggagcaaagagcaggaggacaggggattgatctcccaagggaggtcccccgatccgagtcacggcaccaaaTTtcatgtgtgtccatgtgaagagaccaccaaacaggctttgtgtgagcaacaaggctgtttatttcacctgggggcaggcaggctgagtccaaaaagagagtcagcgaagggagataggggtggggctgttttatgggatttgggtaggtaaaggaaaattacagtcaaaggggggttgttctctggcaggcagagtgggggtcacaaggtacccagtgggggagcttttgagcaacgatgagccaggagaagggatttggcgagagaatggcatcagttaaggca i ponAbe2.chr19 I 11 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C e panTro4.chr19 59923111 10 + 63644993 I a score=33411.000000 s hg38.chr19_GL949747v2_alt 657499 126 + 729520 gtaacaggccattttcacttcttttgtggtggaatgtcatcagttaaggcaggaaccagccatatggatgtgtacgtgcaggtcacaggggatatgatggcttagcttgggctcagaggcctgaca s panTro4.chr19 59923121 126 + 63644993 GTAACaggccattttcccttcttttgtggtggaatgtcatcagttaaggcaggaaccggccatatggatgtgtatgtgcaggtcacagggtatatgatggcttagcttgggctcagaggcctgaca i panTro4.chr19 I 10 C 0 s ponAbe2.chr19 56868695 126 + 60714840 ggaacaggccattttcacttcttttgtggtggaatgtcatcagttaaggcaggaaccggccatctggatgtgtacatgcaggccacaggggatatgatggcttagcttgggctcagaggcctgaca i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C a score=1500.000000 s hg38.chr19_GL949747v2_alt 657625 1 + 729520 G s panTro4.chr19 59923247 1 + 63644993 g i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56868821 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60656699 1 + 64156825 g i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55797754 1 + 59248254 g i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 14254 1 + 138250 g i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C a score=172329.000000 s hg38.chr19_GL949747v2_alt 657626 101 + 729520 CACCTACCTAAAAAATTCCAATAGCACTAAAAGGGTGTGTACAAAATGCAGTGGC-TGACTAACCATCTCCTCCATTGCTCCGCCTAAGAGACACCCACTTT s panTro4.chr19 59923248 101 + 63644993 cacctacctaaaaaattccaatagcactaaaagggtgtgtacaaaatgcagtggc-tgactaatcatctcctccattgctccgcctaagagacacccacttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56868822 101 + 60714840 CACCTACCTAAAAAATTCCAATAGCACTAAAAGGGTGTGTACAAAATGCAGTGAC-TAACCAACCGTCTCTTCCATTGCTCCGCCTAAGAGACACCCACTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60656700 102 + 64156825 cacctccttaaaaaattccaatagcactaaaagggtgtgtacaaaatgcaatggcttaaccaaccgtctcttccattgctccacctaagagacacccacttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55797755 102 + 59248254 cacctccttaaaaaattccaatagcactaaaagggtgtgtacaaaatgcaatggcttaaccaaccgtctcttccattgctccgcctaagagacacccacttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47905739 101 + 51301725 cacctgCTTAAAAAATTCCAATAGCACTAAAAGGGTTTGTACAAAATGCAATGGC-TAACCAACCGTCTCTTCCATTGCTCCGCCTAAGAGACACCCACTTT i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 14255 97 + 138250 catctactttaaaattttcaatagcactaaaagggtatgtacaaaatgcaatggc-taaccaaccatctcttccattgct----ctaagagacacccacttt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I a score=393349.000000 s hg38.chr19_GL949747v2_alt 657727 176 + 729520 TAGCTGTTTTCTTTAGGAACTTGTTAATATTAGGTTTCTAAAAACATGTAACCATGTG---AATGAGCTTAGACTTACTGGATTCCTATCATAATAGGCGGGGCCTTAGTTATTCTACAGCGTTGTTCTTACTG----TTTTTTCTCTTCCAATGTTTATCTCTATGTCTGCATATCAACATT s panTro4.chr19 59923349 176 + 63644993 tagctgttttctttaggaacttgttaatattaggttgctaaaaacatgtaaccatgtg---aatgagcttagacttactggattcctatcataataggcggggacttagttattctacagtgttgttcttactg----ttttttctcttccaatgtttatctctatgtctgcatatcaacatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56868923 176 + 60714840 TATCTGTTTTCTTTAGGAACTTGTTAATATTAGGTTTCTAAAAATGTGTAACCGTGTG---AATGAGCTTAGACTTACTGGATTCCTATCATAATAGGCAGGGACTTAGTTCTTCTACAGTGTTGTTCTTACTG----TTTTTTCTCTTCCAATGTTTATGTCTATGTCTGCATATCAACATT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60656802 173 + 64156825 tagctgttTTCTTTAGGAACTTGTTAATATTAGATTTCTAAAAATGTGTAACCATGTG---AATGAGCTTACACTTACTGGATTCCTATCATAATAGGCAGGGACTTAGTTCTTCTACAG---TGTTCTTACTG----TTTTTTCTTTTCCAATGTTTATGTCTACGTCTGCACATCAATATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55797857 173 + 59248254 tagctgttTTCTTTAGGAACTTGTTAATATTAGATTTCTAAAAATGTGTAACCATGTG---AATGAGCTTACACTTACTGGATTCCTATCATAATAGGCAGGGACTTAGTTCTTCTACAG---TGTTCTTACTG----TTTTTTCTTttccaatgtttatgtctacgtctgcacatcaatatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47905840 176 + 51301725 TAGCTGTTTTCTTTAGGAACTTGTTAATATTAGATTTCTAAAAATGTGTAACCATGTG---AATGAGCTTACACTTACTGGATTCCTATCATAATAGGCAGGGACTTCGTTCTTCTACAGTGTTGttcttactg----ttttttcttttccaatgttTATGTCTACGTCTGCACATCAATATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47609928 176 + 50890351 TAGCTGTTTTCTTGAGGAACTTGTTAATATTAGATTTCTAAAACTGTGTAACCGTGTG---AATGAGCTTACACTTACTGGATTCCTATCATAATAGGCAGGGACTTAGTTCTTCTACAGTGTTGTTCTTACTG----TTTTTTCTTTTCCAATGTTTCTGTCTACGTCTGCACGtcaatatt i chlSab2.chr6 I 422 C 0 s calJac3.chr22_GL285922_random 14352 182 + 138250 tggctgttttcgttagg-tctttttaatattaggtttctaaaaatgtgTAACCATGTGAATAATGAACTTAGACTTACTAGATTCCTATCATAATAGGTGGGGACTTTGTTCTCCTACAGTGTTGTTCTTACTGTTTTTTTTTTCTCTTTCAATGTTTATGTCTACGTCTGCATATCAGTACT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=50167.000000 s hg38.chr19_GL949747v2_alt 657903 35 + 729520 CAGTATCACAtttttttttt-------ttgagacagagtctc s panTro4.chr19 59923525 33 + 63644993 cagtatcacatttttttttt---------gagacagagtctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56869099 41 + 60714840 CAGTATCACttttttttttttt-ttttttgagacagagtctc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60656975 42 + 64156825 CAGTATCACttttttttttttttttttttgagacagagtctt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55798030 37 + 59248254 cagtatccc-----tttttttttttttttgagacagagtctt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47906016 42 + 51301725 cagtatcacttttttttttttttttttttgagacggagtctc i papAnu2.chr19 C 0 I 299 s chlSab2.chr6 47610104 40 + 50890351 cagtatcac--tttttttttttcttttttgagacagagtctt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14534 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I a score=460204.000000 s hg38.chr19_GL949747v2_alt 657938 234 + 729520 actctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcagcctc--------------------------------agtctcctgagtagctgggactacaggcgtgtgccaccacgactggctaatttttgtatttttagtagagacagggtttcaccatgttggctgagctggtctcgatctcctgacctcgtgatctgcccacctcagcctcccgaagtgctgggattacaggcatgagccaccacgcccggc s panTro4.chr19 59923558 266 + 63644993 gctctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcagcctctgcctcctgggttcaagtgattctcctgcctcagtctcctgagtagctgggactacaggcgtgtgccaccacgactggctaatttctgtatttttagtagagacagggtttcaccatgttggccgagctggtctcgatctcctgacctcgtgatctgcccacctcagcctcccgaagtgctgagattacaggcatgagccaccacgcccggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56869140 266 + 60714840 gctctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcagcctccgactcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggactacaggcgtgtgccaccacgactggctaatttttgtatttttagtagagacagggtttcaccatgttagctgggctggtctcgatctcctgacctcgtgatctgcccacctcagcctcctgaagtgctgggattacaggcatgagtcaccacgcccggc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60657017 266 + 64156825 actctgtcacccagactggagtgcagcggcacaatctcagctcactgcagcctccacctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggactacaggcgtgtgccaccacgactggctaatttttgtatttttagtagagacggggtttcgccatgttggccaggctgatctcgatcttctgaccgggtgatccgcccgcctcagcttcccaaagcgctgggattataggcatgagccaccacgcctggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55798067 266 + 59248254 actctgtcacccaggctggagtgcagcggcacaatctcagctcactgcagcctccacctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggactacaggcgtgtgccaccacgactggctaatttttgtatttttagtagagacggggtttcgccatgttggccaggctgatctcgatcttctgacctggtgatctgcccgcctcagcttcccagagcgctgggattataggcatgagccaccacgcctggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47906357 266 + 51301725 actctgtcacccagactggagtgcagcggcacaatctcagctcactgcagcctccacctcctgggttcaagtgattctcctgcctcggcctcctgagtacctgggactacaggcgtgtgccaccacgactggctaatttttgcatttttagtagagacggggtttctccatgttggccaggctgatctcgatcttctgacctggtgatccgcccgcctcagcttcccaaagcactgggattataggcgtgagccaccatgcctggc i papAnu2.chr19 I 299 C 0 s chlSab2.chr6 47610144 266 + 50890351 actctgtcatccagactgaagtgcagcagcacaatctcagctcactgcagcctccacctcccgggttcaagtgattctcctgcctcagcctcctgagtagctggggctacaggcgtgtgccaccacgactggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctgatcttgatcttctgacctggtgatccgcccgcctcagcttcccaaagcgctgggattacaggcatgagccaccgcgcctggc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14534 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I a score=413140.000000 s hg38.chr19_GL949747v2_alt 658172 201 + 729520 cAGTATCACATGTTTATACCCACAGATATTCGCAGCCGAGAATTTTCGGGTAATATAACTTGCTTCTTTTATTTTTGTTGTTGTTATTGTTCCCCTAAAGTTTATAtttgttttttatttttattttcttttgaggcagggtctcactctgtcacccaggtttgacagcagtggtgcaatcatggctcactgcagcctcaa s panTro4.chr19 59923824 199 + 63644993 cagtatcacatttttatacccacagatattcgcagctgagaattttcgggtaatataacttgcgtcttttatttttgttgttgttattgttcccctaaagtttatat--gttttttatttttattttcttttgaggcagggtctcactctgtcacccaggtttgagagcagtggtgcaatcatggctcactgcagcctcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56869406 201 + 60714840 cAGTATCACATTTTTATACCCACAGATATTCGCAGCTGAGAATTTTCAGGTAATATAACTTGCTTCTTTTATTTTTGTTGTTGTTATTGTTCCCCTAAAGTTTATAtttgttttttatttttattttcttttgaggcagggtctcactctgtcacccaggtttgagagcagtggtgccatcatggctcactgcagcctcaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60657283 183 + 64156825 cAGTATCACATTTTTATACCCACAGATATTCACAGCTGAGAATTTTCAGGTAATATAACTTGCTTCTTTTATTTTTGTGGTTG---TTGTTCCCCTAACGTTTATAtttgctctttatttttgttttcttttgaggcagggtct------------caggcttgagagcagtggtgcaatcatggctcactgcagcct--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55798333 183 + 59248254 cagtatcacatttttatacccacagatattcacagctgagaattttcaggtaatataacttgcttcttttatttttgtggttg---ttgttcccctaacgtttatatttgctctttatttttgttttcttttgaggcagggtct------------caggcttgagagcagtggtgcaatcatggctcactgcagcct--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47906623 186 + 51301725 cagtatcACATTTTTATACCCACAGATATTCACAGCTGAGAATTTTCAGGTAATATAacttgcttcttttatttttgttgttg---ttgttcccctaacgtttatatttgctctttatttttgttttcttttgaggcagggtct------------caggcttgagagcagtggtgcaatcatgactcactgcagcctcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47610410 186 + 50890351 cagtatcacatttttatacccacagatattcacagctgagaattttcaggtaatataacttgctgcttttatttttgttgttg---ttgttcccctaacgtttatatttgctctttatttttgttttcttttgcggcagggtct------------caggcttgagagcagtggtgcaatcatggctcactgcagcctcaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 14534 192 + 138250 CAGTATCACATGTTTATACTCACAGATATTCACAGTTGAGAATTTTTAGGTAATATAACTTGCTTCCTTTATTTTTTTTTT-----TCCTTCCCCTAAAGTTTATATTTG----TCAttttcattttcttttgaggcagggcctcactctgtcagctaggcttgagagcagtggtgcagtcgtggctcactgcagcctcaa i calJac3.chr22_GL285922_random C 0 I 104 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=385142.000000 s hg38.chr19_GL949747v2_alt 658373 201 + 729520 cctccccgggctcaggtgatccccaacctcagcctcctgagtacctgagagtaggcatgtggtaccacacccagctaa-ttttttatattttttgtatatgagacaaggtttcaccatgttgcccaggctggtctcgaactcttaggctcaagcgatcccgcctcagcctcccaaagtgctggga-----------------------ttacaggtgtgagccac s panTro4.chr19 59924023 201 + 63644993 cctccccgggctcaggtgatccccaacctcagcctcctgagtacctgagagtaggcatgtggtaccacacccagctaa-ttttttatattttttgtatatgagacaaggtttcaccatgttgcccaggctggtctcgaactcttaggctcaagcgatcccgcctcagcctcccaaagtgctggga-----------------------ttacaggtgtgagccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56869607 202 + 60714840 cctccctgggctcaggtgatccccaacctcagcctcctgagtacctgagagtaggcatgtggtaccacacccagctgatttttttgtattttttgtatatgagacaaggtttcaccatgttgcccaggctggtctcaaactcttaggctcaagcgatcccgcctcagcctcccaaagtgctggga-----------------------ttacaggtgtgagccac i ponAbe2.chr19 C 0 T 11733 s rheMac3.chr19 60657466 201 + 64156825 -----------------------ctacctcagcctcctgagtatctgagagtaggcatgtggtaccacacccagctaa-ttttttgtattttttgtatatgagacgaggtttcaccatgttgcccaggctggtcttgaactcttaggctccagcgatcctgcctcattctctcagagtgctgggaGTGAGCCCACTCTGAGCCCACACTTACAGGTGTGAGCCAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55798516 178 + 59248254 -----------------------ctacctcagcctcctgagtatctgagagtaggcatgtggtaccacacccagctaa-ttttttgtattttttgtatatgagactaggtttcaccatgttgcccaggctggtcttgaactcttaggctccagcgatcctgcctcattctctcagagtgctggga-----------------------ttacaggtgtgagccac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47906809 201 + 51301725 cctccccgggctcaggtgatccccaacctcagcctcctgagtatctgagagtAGGCATGTggtaccacacccagctaa-ttttttgtattttttgtatatgagacgaggtttcaccatgttgcccaggctggtcttgaactcttaggctccagcaatcctgcctcattctctcagagtgctggga-----------------------ttacaggtgtgagccac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47610596 201 + 50890351 cctccccgggctcaggtgatccccaacctcagcctcctgagtacctgagagtaggtatgtggtaccacatccagctaa-ttttttgtattttttgtatatgagacgaggtttcaccatgttgcccaggctggtctcgaactcttaggctccagcgatcctgcctcattctcccaaagtgctggga-----------------------ttacaggtgtgagccac i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 14830 149 + 138250 CCTCcctgggctcaggtgatccccatcctccgtcttctgagtacctgagagtaggcacgtgctaccatacccagctaa--tttttgtgttttttgtatatgaggtggtgtttcacaatggcgtccaagctagtctgaaacttctgggctca-------------------------------------------------------------------------- i calJac3.chr22_GL285922_random I 104 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=155623.000000 s hg38.chr19_GL949747v2_alt 658574 94 + 729520 tgtgccTAGGCTATACTGGTCTTTTTAAAATCTACTTAGTTTACTTGACCTCTAAAATTATTTTTCCTCTGTCTTCTGATAGCATCTCAGTATG s panTro4.chr19 59924224 92 + 63644993 tgtgcctaggctatactggtcttttaaaaatctacttagtttactTGACCTCTAAAATTATTTTTCCT--GTCTTCTGATAGCATCTCAGTATG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60657667 94 + 64156825 TCTGCCTAGGCTATACCTGTCTTTTAAAAATCTACTTAGTTTACTTGACCTCTGTAATTATTTTTCATCTGTCTTCTGATAGCATCTCAGTATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55798694 94 + 59248254 tctgcctaggctatacttgtcttttaaaaatctacttagtttacttgacctctgtaattatttttcatctgtcttctgatagcatctcagtatg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47907010 94 + 51301725 tctgcctagGCTatacttgtctttttaaaatctacttagTTTACTTGACctctgtaattatttttcatcTGTCTTCTGATAGCATCTCAGTATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47610797 94 + 50890351 tctgcctaggctacacttgtctttttaaaatctacttagtttacttgacctctatcattatttttcatctgtcttctgatagcatctcagtatg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 14979 86 + 138250 --------ggcaatactTGTctttttaaaatctacttagtttacttgacctctataattatttttcctctttcttctaatagcttctcagtatg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e ponAbe2.chr19 56869809 11733 + 60714840 T e nomLeu3.chr10 103362684 100 - 106955855 I a score=57556.000000 s hg38.chr19_GL949747v2_alt 658668 24 + 729520 ATTTTCCACTATGTTAAGACGAGG s panTro4.chr19 59924316 24 + 63644993 ATTTTCCACTATGTTAAGACAAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858076 24 + 60714840 ATTTTCCACTATGTTAAGACAAAT i ponAbe2.chr19 T 11733 C 0 s rheMac3.chr19 60657761 24 + 64156825 ATTTTCCACTATGTTAAGACAAAT i rheMac3.chr19 C 0 I 335 s macFas5.chr19 55798788 24 + 59248254 attttccactatgttaagacaaat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47907104 24 + 51301725 ATTTTCCACTATGTTAAGACAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47610891 24 + 50890351 attttccactatgttaagacaaat i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 15065 24 + 138250 attttccactatgttaagacaagt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=49609.000000 s hg38.chr19_GL949747v2_alt 658692 21 + 729520 AATTGACCCATTCTTACATTT s panTro4.chr19 59924340 21 + 63644993 AATTGACCCATTCTTACATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858100 21 + 60714840 AATTGACCCATTCTTACATTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60658120 21 + 64156825 AATTGACCCATTCTTACATTT i rheMac3.chr19 I 335 C 0 s macFas5.chr19 55798812 21 + 59248254 aattgacccattctttttttt i macFas5.chr19 C 0 I 780 s papAnu2.chr19 47907128 21 + 51301725 AATTGACCCATTCTTACATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47610915 21 + 50890351 aattgacccattcttacattt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 15089 21 + 138250 aattgacccattattacattt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=205260.000000 s hg38.chr19_GL949747v2_alt 658713 117 + 729520 GGAGGCTTCTCTAAGCAACTTTCCCATTCCCCCTTCACCCAAGCTGTGTGCTCACTAGCCCTGATTCACAGCCGTCGTCCTGGAACTTCTTGGTGCCATCCTTCTGTCTTTTCCcaa s panTro4.chr19 59924361 117 + 63644993 GGAGGCCTCTCTAAGCAACTTTCCCGTTCCCCCTTCACCCAAGCTGTGtgctcactagccctgattcacagccgtcgtcctggaacttctttgtgccatccttctgTCTTTTCCcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858121 117 + 60714840 GGAGGCTTCTCTAGGCAACTTTCCCGTTCCCCCTTCACCCAAGCTGTGTGCTCACTAGCCCTGATTCACAGCCGTCGTCCTGGAACTTCTTTCTGCCATCCTTCTGTCTTTTCCcaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60658141 117 + 64156825 GGAGGTTTCTCTGAGCACACTTCCCGTTCCCCCTTCACCCAAGCTGTGTGCTCACCAGCCCTGATTCACAGCCGTCGTCCTGGAGCTTCTTTCTGCCATCCTTCTGTCTTTTcccaa i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47907149 117 + 51301725 GGAGGTTTCTCTGAGCACCCTTCCCGTTCCCCCTTCACCCAAGCTGTGTGCTCACTAGCCCTGATTCACAGCCGTCGTCCTGGAGCTTCTTTCTGCCATCCTTCTGTCTTTTCCCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47610936 117 + 50890351 ggaggtttctctgagcaaccttcccgtttccctttcacccaagctgtttgctcactagccctgattcacagccgtcgtcctggagcttctttctgccatccttctgTCTTTTcccaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 15110 117 + 138250 gaagttttctctaagcaaccttcccattcccgctgcacctaagctgtgtgctcactagcccggattcacagctgtcatcctgaagcttctgtctgccgtccttctgTCTTTTCCcaa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e macFas5.chr19 55798833 780 + 59248254 I a score=11915.000000 s hg38.chr19_GL949747v2_alt 658830 5 + 729520 gtgac s panTro4.chr19 59924478 5 + 63644993 gtgac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858238 5 + 60714840 gtgac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60658258 5 + 64156825 gtgac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55799613 5 + 59248254 gtgat i macFas5.chr19 I 780 C 0 s papAnu2.chr19 47907266 5 + 51301725 GTGac i papAnu2.chr19 C 0 I 322 s chlSab2.chr6 47611053 5 + 50890351 gtgac i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 15227 5 + 138250 gtgat i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=87402.000000 s hg38.chr19_GL949747v2_alt 658835 40 + 729520 tcacctacctcaacctcccaaagtgccgggattacaggcg s panTro4.chr19 59924483 40 + 63644993 ccacctacctcaacctcccaaagtgctgggattacaggcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858243 40 + 60714840 ccacctacctcaacctcccaaagtgctgggattacaggcg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60658263 40 + 64156825 ccacccacctcaacctcccaaagtgctgggattacaggca i rheMac3.chr19 C 0 I 332 s macFas5.chr19 55799618 40 + 59248254 ccgcctgtctcagcctcccaaagtgctgggattacaggct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47907593 40 + 51301725 ccccccttctcggcctcccaaagtgctgggattacaggct i papAnu2.chr19 I 322 C 0 s chlSab2.chr6 47611058 40 + 50890351 ccacccacctcaacctcccaaagtgctgggattacaggca i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 15232 40 + 138250 ccacccatctcaggctcctaaagtgctgggatgacaggcg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=67257.000000 s hg38.chr19_GL949747v2_alt 658875 33 + 729520 tgagccactgtggccagccattcttttcctttt s panTro4.chr19 59924523 33 + 63644993 tgagccactgtggccagccattcttttcctttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858283 33 + 60714840 ttagccactgtggccagccattcttttcctttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60658635 33 + 64156825 tgagccactgcgcccggccATTCTTTTCCTTTT i rheMac3.chr19 I 332 C 0 s macFas5.chr19 55799658 33 + 59248254 tgagccactgcgcccggccATTCTTTTCCTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47907633 33 + 51301725 tgagccactgcgcctggccattcttttcctttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47611098 29 + 50890351 tgagccatcg----tggccattcttttcctttt i chlSab2.chr6 C 0 I 1988 s calJac3.chr22_GL285922_random 15272 33 + 138250 taagccaccattcccagccattcttttcctttt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=1738065.000000 s hg38.chr19_GL949747v2_alt 658908 781 + 729520 ttaaaacaatttttatcttctttattttaagtagagatg-gggtctcactatgttgcccaggctggtcttgaactcctgggctcaagcgatcctcctgccttggcctcccacagtgctaggattacagacatgatccactgcacttggccCAgtggtacagttttacactcattagatggtcaagaaatgcctaaacgctataataaatatagaactttaccttgagaagacctaacatttccttcagaaagtaaatatgagaggggtGGAGACGGTGCATTATC-----TTATTTTTATGAttttaaaaatgtatacagaattgtacatatttatggggtggacagcaatattgcagtacatgtatacaacgtgctatgatcaaatcagggtaattgacatattcatcCC----TGTAtt-ttttgagacaaagtcaggcttcgtcacccgagctagagtgcagtggtgtgatctcagctcactgcaacctctgcctcccaggctcaagccattctcccacctcagccccctgagttgctgggagtatagggatgcaccaccacacctggctaatttttgtgttttt----ttgttttg--ttggtagagatgaggtttcaccatgttgcacaggctgatcttgTTTTCTAATGTGAAGGGAAGCGGGCAACGTGCTAGTTTTACACTAAGGAA----AATGAATGACATACCCAAACTGCCTGCAAGACCCGTTCTGAGAGACGAAA-GGAGATTTGTTAGACCGCAGTGGGAGATGGA------GTGAGGGTGAGAGTTTCTGGGG s panTro4.chr19 59924556 780 + 63644993 ttaaaacaatttttatcttctttattttaagtagagatg-gggtctcactgtgttgcccaggctggtctcgaactcctgggctcaagtgatcctcctgccttggcctcccaaagtgttaggattacagacatgatccactgcacttggccCAgtggtacagttttacactcattagatggtcaagaaatgcctaaatgctataataaatatagaactttaccttgagaagacctaacatttccttcagaaagtaaatatgagaggggtggagatggtgcattatC-----TTATttttattattttaaaaatttatacataattgtacatatttatggggtagacagcaatatttcaatacatgtatacaatgtgttatgatcaaatcagggtaattaacatattcatccc----tttatt-ttttgagacaaggtcaggctttgtcacccgagctagagcgcagtggtgtgatctcagctcactgcaacctctgcctcccaggctcaagccattctcccacctcagccccctgagttgctgggagtatagggatgcaccaccacacctggctaatttttgt-ttttt----ttgttttg--ttggtagagatggggtttcaccatgttgcacaggctgatcttgTTTTCTAATGTGAAGGGAAGCGGGCAACGTGCTAGTTTTACACTAGGGAA----AATGAATGACACACCCAAACTGCCTGCAAGGCCCGTTCTGAGAGACGAAA-GGAGATTTGTTAGACCGCAGTGGAAGATGGA------GTGAGGGTGAGAGTTTCTGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858316 792 + 60714840 tttaaacaatttttatcttctttattttaagtagagatg-gggtctcactatgttgcccaggctggtcttgaactcctgggctcaagtgatcctcctgccttggcctcccaaagtgctaggattacagacatgatccattgcacttggccCAgtggtacagttttacactcattagatggtcaagaaatgcctaaatgctataataaatatagaactttaccttgcgaagacctaacatttccttcagaaagtaaatatgagaggggtGGAGATGGTGCAttatcttattttatttttattattttaaaaatttatacatagttgtacatatttatggggtagacggcaatatttcaatacatgtatgcaatgtgttatgatcaaatcagggtaattaacatattcatcactttatttatt-tttcgagacaaagtcaggctttatcacccgggctagagtgcagtggtgtgatcttagctcactgcaacctctgccttccaggctcaagccgttctcccacctcagccccctgagttgctgggagtatagggatgcaccaccacacgtggctaatttttg--ttttt----ttgttttt--ttggtacagatggggtttcaccatgttgcacaggctgaccttgTTTTCTAATGTGAAGGGAAGCGGGTAACGTGCTAGTTTTATACTAAGGAAAATGAATGAATGACATACCCAAACTGCCTGCAAGGCCCGTTCTGAGAGACGAAA-GGAGATTTGTTAGACTGCAGTGGAAGATGGA------GTGAGGGTGAGAGTTTCTGGGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60658668 771 + 64156825 TTAAAAAaatttttatcttc-----tttaagtagagatg-ggatctcactatgttgcccaggctggtcttgaactcctgggctcaagtgatcctcctgccttggcctcccaaagtgctaggattacagacatgatccactgcacccgaccCAgtggtacagttttacacacattagatggtcaagaaatgcct-aatgcgataataagtatagaactttactttgagaagacctaacatttccttcagaaagtaaatatgagaggggtagagatggtgcattatCTTAttttatttttattattttaaaaatgtatacataattgtacatatttatggggtagacagcaatatttcaatacatgtgtacaatgtgttttgatcaaatcagggtaattagcatattcatcac----ttTGtttttttgagacatggtcgggctttgtcacccgggctggagtgcagtggtgtgatctcagctcactgcaacctctgcctcccaggctcaagccgttctcccacctctgccccctgaggtgctgggagaatagggatgcaccaccacacctggctaatgtttg--ttgtt--------------ttggtagagatggggtttcaccatgttgcacaggccgatGTTGTTTTCTGATGTGAAGGGAAGAGGGCAACGTGCTAGTTTTATACTAAGGAA----AACGAATGACGTACCCAAACTGCCTGCACGGCCCGTTCTGAGAGACGAAA-GGAGATTTGTTAGACTGCAGTGGAAGATGGA------GTGAGGGTGAGAGTTTCTGGGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55799691 771 + 59248254 TTAAAAAaatttttatcttc-----tttaagtagagatg-ggatctcactatgttgcccaggctggtcttgaactcctgggctcaagtgatcctcctgccttggcctcccaaagtgctaggattacagacatgatccactgcacccgaccCAgtggtacagttttacacacattagatggtcaagaaatgcct-aatgcgataataagtatagaactttactttgagaagacctaacatttccttcagaaagtaaatatgagaggggtagagatggtgcattatCTTAttttatttttattattttaaaaatgtatacataattgtacatatttatggggtagacagcaatatttcaatacatgtgtacaatgtgttttgatcaaatcagggtaattagcatattcatcac----ttTGtttttttgagacatggtcaggctttgtcacccgggctggagtgcagtggtgtgatctcagctcactgcaacctctgcctcccaggctcaagccgttctcccacctctgccccctgaggtgctgggagaatagggatgcaccaccacacctggctaatgtttg--ttgtt--------------ttggtagagatggggtttcaccatgttgcacaggccgatGTTGTTTTCTGATGTGAAGGGAAGAGGGCAACGTGCTAGTTTTATACTAAGGAA----AACGAATGACGTACCCAAACTGCCTGCACGGCCCGTTCTGAGAGCCGAAA-GGAGATTTGTTAGACTGCAGTGGAAGATGGA------GTGAGGGTGAGAGTTTCTGGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47907666 772 + 51301725 ttaaaaaaatttttatcttc-----tttaagtagagatg-ggatctcactatgttgcccaggctggtcttgaactcctgggctcaagtgatcctcctgccttggcctcccaaagtcctgggattacagacatgatccactgcacccaacccagtGGTACAGTTTTACACGCATTAGATGGTCAAGAAATGCCT-AATGCGATAATAAGTATAGAACTTTACTTTGAGAAGACCTAACATTTCCTTCAGAAAGTAAATATGAGAGGGGTGGAGATGgtgcattatcttattttatttttattatttttaaaatgtatacataattgtacatatttatggggtaggcagcaatatttcaatacatgtgtacaatgtgttttgatcaaatcagggtaattagcatattcatcac----tttgttattttgagacatggtcgggctttgtcacccgggctggagtgcagtggtgtgatctcagctcactgcaacctctgcctcccaggctcaagccgttctcccacctctgccccctgaGGTGCTGGGAGAATAGGGatgcacccccacacctggctaatgtttg--ttgtt--------------ttggtagagatggggtttcaccatgttgcacaggccgATGTTGTTTTCTGATGTGAAGGGAAGAGGGCAACGTGCTAGTTTTATACTAAGGAA----AACGAATGACGTACCCAAACTGCCTGCACGGCCCGTTCTGAGAGCCGAAAGGGAGATTTGTTAGACTGCAGTGGAAGATGGA------GTGAGGGTGAGAGTTTCTGGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47613115 771 + 50890351 TTAAAAAaatttttatcttc-----tttaagtagagctg-ggatctcactatgttgcccaggctggtcttgaactcctgggctcaagtgatcctcctgccttggcctcccaaagtgctaggattacagacatgatccactgcacccgaccCAgtggtacagttttacacgcattagatggtcaagaaatgcct-aatgtgataataagtatagaacttgactttgagaagacctaacatttccttcagaaagtaaatatgagaggggtggagatggtgcattatCTTACtttatttttattattttaaaaatgtatacataattgtacatatttatggggtagacagcaatatttcagtacatgtgtacaatgggttttgatcaaatcagggtaatgagcatattcatcac----ttTGtttttttgagacatggtcgggctttgtcacccaggctggagtgcagtgatgtgatctcagctcactgcaacccctgcctcccaggctcaagccgttctcccacctctgcccactgaggtgctgggagaatagggatgcaccaccacacctggctaatgtttg--ttgtt--------------ttggtagagatggggtttcaccatgttgcacaggccgatGTTGTTTTCTGATGTGAAGGGAAGAGGGCAACGTGCTAGTTTTATACTAAGGAA----AACGAATGACGTACCCAAACTGCCTGCACAGCCCGTTCTGAGAGACGAAA-GGAGATTTGTTAGACTGCAGTGGAAGATGGA------GTGAGGGTGCGAGTTTCTGGGG i chlSab2.chr6 I 1988 C 0 s calJac3.chr22_GL285922_random 15305 792 + 138250 taaaaaaactttttctcttctttatttttagtggagacgcgggtctcactatgctgcccaggctggtcttgaactcctcggcttaagtgatcctcctgccttgcccacccgaagtgctaggattacagacgtgatccactgtaccTCGTGCAgtggtatagttttacactcattagatgatcaagaaatgcctaaatgccataataaatgtagaactctactttgagaagacctaatatttccttcagaaagtaattatgagaggggtGGAGATGGTGCAttatcttattttattttt---attttaaaaatttatacataattgtacatatttatggggtaggtaacaatatttcaatacatatataccatgtgttatgatcagat-gggataattagcatattcatcac----tttatt-ttttgagataaggtcgggctctgtcactcaggctggagtgcagcggtgtgatctcagctcactgcaacctctgcctcccggactcaaacccttctcccacctcagcccccggagttgctaggactataggcatgcatcaccacacctggccgatttttg--ttttctgttttgttttgttgtggtagagatggggtttcaccgtgtcgcacaggctgatcttgTTTTCTAAAGTGCAGGAAAGCAATCAACAGGCTAGTTTTACACTAATGAA----AATGAACGACATACCCAAACTGCCCGCAAGGCCTGTTCTAAGAAATGAGA-GGAG-TGAGTTAGACTGCAGTGGAAGATGGAGTTGGGGTTGGGGTGAGTGTTTCTGGGG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=1384272.000000 s hg38.chr19_GL949747v2_alt 659689 578 + 729520 AAA-ACCAGACA-AGAGCACAGAGGGCCAAAGGGAAGCACGGGAGGATTTTGCACAGAGGATGGAACAGAGTCAACCCTGAGAGCTGGGAACCTTAGAGATCCGTCTGGAGCCCATATTAGAGA-GGTTGAAGAAAGAGGCCAGTATG-TGGTCCAGCCAGGGTACCATGTCATCCACAGTGTGCAGG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAATGGAGGGTGCCCTcagacagagaggcagacagacagacagacaCTGGCCGAACGGCTCCCTGATGGAACACCAGGAGGAGGCAGCATGGCC--TCGTTTCCACAGCTGTAGCCTCTGCCCTCCTGCTTCCACGCTCCACACACGC------CAGTCTTTGAGTCGCCTCCCATGCCATGATCCCTCCCTTGGATACGACCGTGCC-TGGGGTTC-AGCGGTCATGAACATAACCCGCGGCTGTGAACATCCTGTCGGCCTCCATCCTGACCCCCGTTTGATTTCCGGGTCAGCGGGAGGGGCGGGAGGGGCGGAAGCGGCCTCTGCACAGCCCTGCCCCTGTGCCGCAGGCGCTTCCTCCGGCTG s panTro4.chr19 59925336 580 + 63644993 AAA-ACCAGACA-AGAGCACAGAGGGCCAAAGGGAAGCACGGGAGGATTTTGCACAGAGGATGGAACAGAGTCAACCCTGAGAGCTGGGAACCTTAGAGATCCGTCTGGAGCCCATATTAGAGA-GGTTGAAGAAAGAGGCCAGTATG-TGGTCCAGCCAGGGTACCATGTCATCCACAGTGTGCAGG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAATGGAGGGTGCCCTcagacagagaggcagacagacagacagacaCTGGCTGAACGGCTCCCTGATGGAACACCAGGAGGAGGCAGCCTGGCC--TCGTTTCCACAGCTGTAGCCTCTGCCCTCCTGCTTCCATGTTCCACACACAC----CACAGTCTTTGAGTCGCCTCCCATGCCACGATCCGTCCCTTGGATACGACCGTGCC-TGGGGTGC-AGTGGTCATGAACATAACCCGCGGCTGTGAACATCCGGTCGGCCTCCATCCTGACCCCCGTGTGATTTCCGGGTCTGCAGGAGGGGCGGGAGGGGCGGAAGCGGCCTCTGCACAGCCCTGCCCCTGTGCCGAAGGCGCTTCCTCCGGCTG i panTro4.chr19 C 0 I 681 s ponAbe2.chr19 56859108 570 + 60714840 AAA-ACCAAAC---GAGCACAGAGGGCCAAGGGGAAGCACGGGAGGGTTTTTCACAGAGGGTGGAACAGAGTCAACCCTGAGAGCTGGGAACGTTAGAGATCCGTCTGGAGCCCATATTAGAGAGGGTTGAAGAAAGAGGCCAGTATG-TGGTCCAGCCAGGGTACCATGTCATCCACAGTGTGCAAG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAATGGAGGGTGCGCTcagacagagagccagacagacagacagacaCTGGCTGAACGGCTCCTTGAGGGAACACCAGGAGGAGGCAGCATGGCC--TCCTTTCCACAGCTGTAGCCTCTGCCCTCCTGCTTCCACGCTCCACACACGC----CACAGTCTTTGAGTCACCTCCCATGCCATGATCCGTCCCTTGGATACGACCATGCC-TGGGGTTC-AGTAGTCATGAACATAACCCGCGGCTGTGAACATCCGGTCGGCCTCCATCCTGACCCCCGTGTGATTTCTGGGTCT---------GCGGGAGGGGCGGAAGCGGCCTCTGCACAGCCCTGACCCTGTGCCGCAGGCGCTTCCTCCGGCTG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60659439 566 + 64156825 GGACACGAGACA-AGAGCACAGACGGCCAAGGGGAAGCACGGGA-GGTCCTGCACAGAGGAGGGAACAGCGTCAGCCCTGAGAGCTGGGAACGTTAGAGGTCCGTGTGGAGCCCGTATTAGAGAAGCTTGAAGAAAGAGGACGGTATG-TGGTCCAGCCAGGGTACCGGGTCATCCACAGTGTGCAGG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAACGGA-GGTGCCCTCAGACAGAGAGC----CAGACAGACAGACACCGGCTGAACGGCTCCTTGATGGAACACCAGGAGGAGGCAGCATGGCC--TCCTTTCCACC-CTGTAGCCTCTGCCCTCCTGCTCCCATGCTCCACACACGC----CACAGTCTTTGAGTCGCCTCCCATGCCATGATCCGTCCCTTGGATACAACCATGCC-TGGGGTTC-AGTGGTCATGAACATAACCCGCGGCTGTGAACGTCCGGTCGGCCTCCATCCTGATCCCCGTGTGATTTCCGGGTCG---------GCGGGAGGGGCGGGAGCGGCCTCTGCACAGCCCTGACCCTGTGCCGCAAGCGCTTCCTCCGGCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55800462 566 + 59248254 GGACACGAGACA-AGAGCACAGACGGCCAAGGGGAAGCACGGGA-GGTTCTGCACAGAGGAGGGAACAGTGTCAGCCCTGAGAGCTGTGAACGTTAGAGGTCCGTGTGGAGCCCGTATTAGAGAAGCTTGAAGAAAGAGGACGGTATG-TGGTCCAGCCAGGGTACCGGGTCATCCACAGTGTGCAGG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAACGGA-GGTGCCCTcagacagagagc----cagacagacagacaCCGGCTGAACAGCTCCTTGATGGAACACCAGGAGGAGGCAGCATGGCC--TCCTTTCCACC-CTGTAGCCTCTGCCCTCCTGCTCCCATGCTCCACACACGC----CACAGTCTTTGAGTCGCCTCCCATGCCATGATCCGTCCCTTGGATACGACCATGCC-TGGGGTTC-AGTGGTCATGAACATAACCCGCGGCTGTGAACGTCCGGTCGGCCTCCATCCTGATCCCCGTGTGATTTCCGGGTCG---------GCGGGAGGGGCGGGAGCGGCCTCTGCACAGCCCTGACCCTGTGCCGCAAGCGCTTCCTCCGGCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47908438 569 + 51301725 GGACACGAGACA-AGAGCACAGACAGCCAAGGGGACTCACAGGAGGGTTCTGCACAGAGGAGGGAACA--GTCAGCCCTGAGAGCTGGGAACGTTAGAGGTCCGTGTGGAGCCCGTATTAGAGAAGGTTGAAGAAAGAGGACGGTATG-TGGTCCAGCCAGGGTCCCGTGTCATCCACAGTGTGCAGG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAACGGA-GGTGCCCTcagacagagagccagacagacagacagacaccgGCTGAACGGCTCCTTGATGGAACACCAGGAGGAGGCAGCATGGCC--TCCTTTCCACC-CTGTAGCCTCTGCCCTCCTGCTCCCATGCTCCACACACAC----CACAGTCTTTGAGTCGCCTCCCATGCCATGATCCGTCCCTTGGATACGACCATGCC-TGGGGTTC-AGTGGTCATGAACATAACCCGCGGCTGTGAACATCCGGTCGGCCTCCATCCTGATCCCCGTGTGATTTCCGGGTCG---------GCGGGAGGGGCGGGAGCGGCCTCTGCACAGCCCTGACCCTGTGCCGCAGGCGCTTCCTCCGGCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47613886 567 + 50890351 GGACACGAGACA-A-AGCACAGAGGGCCAAGGGGAAGCACGGGAGGGTTCTGCACAGAGGAGGGAACAGAGTCAGCCCTGAGAGCTGGGAATGTTAGAGGTCCGTCTGGAGCCCGTATTAGAGAAGGTTGAAGAAAGAAGCCAGTATG-TGGTCCAGCCAGGGCACCGTGTCCTCCACAGTGTGCAGG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAATGGA-GGTGCCCTcagacagagagc----cagacagacagacaCTGGCTGAACGGCTCCTTGATGGAACACCAGGAGGAGGCAGCATGGCC--TCCTTTCCACAGCCGTAGCCTCTGCCCTCCTGCTCCCATGCTCCACACACGC----CACAGTCTTTGAGTCGCCTCCCATGCCATGATCCGTCCCTTGGATACGACCATGCC-TGGGGTTC-GGTGGTCATGAACGTAACCCGCGGCTGTGAACATCCGGTCGGCCTCCATCCTGATCCCCGTGTGATTTCCGGGTCG---------GCGGGAGGGGCGGGAGCGGCCTCTGCACAGCCCTGACCCTGTGCCGCAGGCGCTTCCTCCGGCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 16097 544 + 138250 AAA-ACCAGAT---GAGCACAGAGGGCCAAGGGGAAGCATGGAG-GGTTCTGCGCAGAGGATGGAACAGAGTCGGCCGTGAGAGCTGGGAACGTTAGAGATTCATCTGGAGCCCGTATTACGGAAGGTTGAAGAAAGAGGCTGGTATG-TGGTCCAGCCAGGGTACCATGTGATCCACAGTGTGCAGG----GAG---G------------------AGACTCCTCCCATCCCAAATGGAGGGCGTCCTCGGACAGGGAGC--------CAGGCAGACACTAGCTGAACGGCTCCTTGATGGAGCACCAGGAGGAGGCAACATGGCC--TCCTTTCCAAG-CTGTAGCCTCAACCCTCCTGCTCCCATGCTCCACGTACAC----CACAGTGTTTGAGTTGTGTCCCATGCCATGATCCATCCCTTGGATATGACCATGCC-TGGGGTTC-ACTGGTTATGAGGAGAACCCGTGGCTGTGAACATCTGGTCGACCTCCATCCTGACTCCCGTGAGATTTCCGGGGCT---------GTGGGAGGGGTGGGAGTGGCCTCTGCATAGCCCTGACCCTGTGCCGCGGGCGCTTCCTCCGGCTG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20066459 551 - 122678785 AAA-AAAAAACACAAAATACAGGAGCCTACAGGGAACCATGGGAGTGTTTTGTACAGAGGATAGAACAGGGTCAGCTATGAGGCTTGGGGATA-CAGAGGTCAATCCATAACATGTATTAGGAAAGGCTG----AAGAGGTCAGTATGATGGTCCAGTTAGGTTGCCATAATATCCGTGATGTGCAAGCTATGAGTGAAAGGATGCTAGCATCCATTAGATACTCCCTATCCCAAATGAACAGAGTCCTTGGACAAAAAAC----CAAATAGACA---------TCAACAACTCCTTTATGGGGCATCACAGAGAAGACCCGTGACCCTCCTTCTCTACAGTCATAACCCCTATCTTCCTGCTCTTATGTTCCACACACTCCAAGCATGGTCTTTA---------------CACTCCCTACCTCATAGACACAACCAAGCCTTGAAGTTCTAATGGT-------GGGACCCATGGTTATGGCCATCTGGTCGACCCCCATCCTGATGACTGTGTGGTTTCTGGGTCT---------GTGGGAGGGGTGGGAGTGGCCTGTGGACAGCTCTGACCCGGAGCAACAGGGGTTTCTTTCTGCTG i canFam3.chr1 I 1307 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=515810.000000 s hg38.chr19_GL949747v2_alt 660267 234 + 729520 TGCCAGTCCTCTGCCAGAAACCCCGCCAGGATTATTAGGATCACAGCCCCGAGGCATATCCGGACCAGGTTGCCCTTGGTGTAGTACTGGCGGGCAGGACCTGGAGGAATGAGGAGAGGCAGGAGCAGGTGA-AAGAGCCCACCTCCAGGACCCCCTCCAAGCCACAT-CTGGGCTTCTCA------------------GAGATCCTATTATTCTCTACTAGCTAGGGGATGCCGCTCACTTTCCTGGAGGGTC s ponAbe2.chr19 56859678 234 + 60714840 TGCCAGTCCTCTGCCAGAAACCCCGCCAGGAGTATTAGGATCACAGCCCCAAGGCATATCCGGACCAGGTTGCCCTTGGTGTAGTACTGGTGGACAGGACCTGGAGGAATGAGGAGAGGCAGGAGCAGGTAA-AAGAGCCCACCTCCAGGATCCCCTCCAAGCCACAT-CTGGGCTTCTGA------------------GAGATCCTATTATTCTCTACTAGCTAGGGGATGCCACTCGCTTTCCTGCAGGGTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60660005 233 + 64156825 TGCCAGTCCTCTGCCAGAAACCCTGCCAGGAGTATTAGGATCACAGCCCCGAGGCATATGCGGACCAGGTTGCCCTTGGTGTAGTACTGGCGGGTGGGACCTGGAGGAATGAGGACAGGCAGGAGCGGGTGG-AAAAGCCCACCTCCAGGACCCTCTCCAAGCCACATCCTGGGCTTCTCA------------------GAGAGCCTGTTATTCTCCACTAGCT--GGGGTGCCATTCTCTTTCCTGGAGGGTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55801028 233 + 59248254 TGCCAGTCCTCTGCCAGAAACCCTGCCAGGAGTATTAGGATCACAGCCCCGAGGCATATGCGGACCAGGTTGCCCTTGGTGTAGTGCTGGCGGGCGGGACCTGGAGGAATGAGGACAGGCAGGAGCGGGTGA-AAAAGCCCACCTCCAGGACCCTCTCCAAGCCACATCCTGGGCTTCTCA------------------GAGAGCCTGTTATTCTCCACTAGCT--GGGGTGCCATTCTCTTTCCTGGAGGGTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47909007 233 + 51301725 TGCCAGTCCTCTGCCAGAAACCCTGCCAGGAGTATTAGGATCACAGCCCCGAGGCATATGCGGACCAGGTTGCCCTTGGTGTAGTGCTGGCGGGCGGGACCTGGAGGAATGAGGACAGGCAGGAGCGGGTCA-AAAAGCCCACCTCCAGGACGTTCTCCGAGCCACATCCTGGGCTTCTCA------------------GAGATCCTGTTATTCTCCACTAGCT--GGGATGCCATTCTCTTTCCTGGAGGGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47614453 233 + 50890351 TGCCAGTCCTCTGCCAGAAACCCTGCCAGGAGTATTAGGATCGCAGCCCCGAGGCATATCCGGACCAGGTTGCCCATGGTGTAGTGCTGGCGGGCGGGACCTGGAGGAATGAGGACAGGCAGGAGCGGGTGA-AAAAGCCCACCTCCAGGACCCTCTCCGAGCCACATCCTGGGCTTCTCA------------------GAGATCCTGTTGTCCTCTACTAGCT--GGGATGCCATTCTCTTTCCTGGAGGGTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 16641 233 + 138250 TGCCAGTCCTCTGCCAGAAATCCCGCCAGGAGTATTAGGATCACAGCTCCGAGGCATATCCGGACCAGGTTGCCCTTGGTGTAGTACTGGCGGGAAGGACCTGGAGGAATGAGGAGAGGCAGGAGCAGGTGA-AGAAGCCCATCTCCAGGACCCCCTCCAAGCCACATCTTGGGCTTCTCA------------------GAGATCCTATTATCCTCTACCAGCT--GGGATGCCATTCTCTTTCCTGGAGGGTT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20067010 252 - 122678785 TGCCAATCTTCTGCCAGAATTCCCACCAGGAGTATTAGAATCACAGCTCCAAGGCATATCCGGACCAGATTGCCCTTGGTGTAGTGCTGGTGAGCAAGACCTGGAAGAATGAAGAGAGACAGGAGCAGGTGACAAAAGCCTATCTCCAGGACCCACTTCAAGGCGCATCTTGAGCTTCTCATAGCCATATCTCTCATTTGAGGTCCTATTATTCTCTGCTATCT--AGAATGCCAGTCTCCTTCCTAGAGAGTT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I e panTro4.chr19 59925916 681 + 63644993 I a score=1342667.000000 s hg38.chr19_GL949747v2_alt 660501 555 + 729520 CCTCCCTTCCCGAGTAGGGGTCAGGGCCAGATGACCCCAATTCTCTAAGTAGCACCTCTCCCTCCTGTGCTCTCACAGGGCTCTGAGAC----AACTCCTCCCCAGACAC----AGATGCTGCCTCGTTATCTGATGCATTGCAAAAGAGAGGACAGTTATAAGGGGTGGG-GAAGAGATGGAATCTCTCTTTCTCTGACCCTTTTTAAAATCTCAACCTTCCCACCTGATCTTAATGCCCAATTCTGAACCCCATACGCTGATATTCTGCCTTT-------ACTCTACACACTGGAACCCAAGATCTGAGAGCTGCAGCCCCTGCGTAGACAAAGGAGTTGGCTTT-GGTGAAGAGACGGGTGAGAAGGAAGGGGGTCTGGAGAGGATGACTTACTCACCAGCTGGAGAGTCTGACTCCTTTGGACTGGCGGTGATACTCCTAGAAGTCTCTGGGAA-CCAAACAAAGGCTAAGTGT---GAAATGAAACCATATTCCCGCCCCCTGTCACTGTGCCTACTCCGAACACACACACACATGGGGAGGCACAATTCCACAGCATTTAAGAAAAGCAT s panTro4.chr19 59926597 546 + 63644993 CCTCCCTTCC-GAATAGGAGTCGGGGCCAGATGACCCCA-TCCTCTAAGTAGCAC---TCCCCTCTGTGTTCTCACAGGGCTATGAGAC----AACTCCTCCCCAGACAC----AGATGCTGCCTCGTTATCTGATGCATTGCAAAAGAGAGGACAGTTATAAGGGGTGGG-GAAGAGATGGAATTTCTCTTTCTCTGACCCTTTTTAAAATCTCAACCTTCCCACCTGATCTTAATGCCCAATTCTGAACCCCATATGCTGATATTCTGCCTTT-------ACTCTACACGCTGGAACCCAAGATCTGAGAGCTGCAGCCCCTGTGTAGACAAAGGAGTTGGCTTT-GGTGAAGAGACGGGTGAGAAGGAAGGGGGTCTGGAGAGGATGACTTACTCACCAGCTGGAGAGTCTGACTCCTTTGGACTGGCGGTGATACTCCTAGAAGTCTCTGGGAA-CCAAACAAAGGCTAAGTGT---GAAATGAAACCATATTCCCGCCCCCTGTCACTGTGCCTACTCCGAACACACACAC----GGGGAGGCACAATTCCACAGCATTTAAGAAGAGCAT i panTro4.chr19 I 681 C 0 s ponAbe2.chr19 56859912 547 + 60714840 CCTCCCCTCCCAAGTAGGGGTCAGGGCCAGATGACCCCAATTCTCTAAGTAGCACCTCTCCCTCATGTGCTCTCACAGGGCTCTGAGAC----AACTCCTCCCCAGACAC----AGATGCTGCCTCGTTATCTGATGGGTTGCAAAAGAGAAGACAGTTATAAGGGGTGGG-GAAGAGATGGAATCTCTCTTTCTCTGACCCTTTTTAAAATCTCAACCTTCCCACCTGATCTTAATGCCCAATTCTGAACCCCATACGCTGATATTCTGCCTTT-------GCTCTACACACTGGAACCCAAGATCTGAGAGCTGCAGCCCCTGTGTAGACAAAGGAGTTGGCTTT-GGTGAAGAGACGGGTGGGAAGGAAGGGGGTCTGGAGAGGATGACTT----ACCAGCTGGAGAGTCTGACTCCTTTGGACTGGCGGTGATACTCCTAGAAGTCTCTGGGAA-CCAAACAAAGGCTAAGTGT---GAAATGAAACCATATTCCCGCCCCCTGCCACTGTTCCTACTCCTAACACACACAT----GGGGAGGCACAATTCcacagtatttaagaagagcat i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60660238 557 + 64156825 CGTCCCCTCCCGAGTAGGTGTCAGGGCCAGATGCCCCCAGTTCTCTAAGTAGCATCTCTCCCTCGTGTGCTCTCACAAGGCTCTGAGACAACTAACTCCGCCCCAGACAC----CGATGCCGCCTCCTTGCCTGATGTATTGCAAAAGGGAAGACAGTTATAAGGGGTGGG-GAAGAGATGGCATCTCTCTTTCTCTGACCCTTTTTAAAATCTCAACCTTCCCGCCTGGTCTTAATGCGCAATTCTGAACCCCATACGCTGATATTCTGCCTTC-------ACTCTACACACTGGAACCCAAGAGCTGAGAGCTGCAGCCCCTGTGTAGACAAAGGACTTGGCTTCGGGTGAAGAGATGGGTGAGAAGGAAGGGGGTCTGGAGAGGACGACTTACTCACCAGCTGGAGAGCCTGGCTCCTTTGGACTGGCAGTGATACTCCTAGAAGTCTCTGGGAA-CAAAAAAAAGGCTAAGTGT---GAAATGAAACCATATTCCCTTTCCC-ATCACCGTGCCTACTCCGAACACACACAC--GTGGGGAGGTCGAATTCCACAGCATTTAAGAAGCGCGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55801261 557 + 59248254 CGTCCCCTCCCGAGTAGGTGTCAGGGCCAGATGCCCCCAGTTCTCTAAGTAGCATCTCTCCCTCGTGTGCTCTCACAAGGCTCTGAGACAACTAACTCCGCCCCAGACAC----CGATGCCGCCTCCTTACCTGATGTATTGCAAAAGGGAAGACAGTTATAAGGGGTGGG-GAAGACATGGAATCTCTCTTTCTCTGACCCTTTTTAAAATCTCAACCTTCCCGCCTGGTCTTAATGCGCAATTCTGAACCCCATACGCTGATATTCTGCCTTC-------ACTCTACACACTGGAACCCAAGAGCTGAGAGCTGCAGCCCCTGTGTAGACAAAGGACTTGGCTTCGGGTGAAGAGATGGGTGAGAAGGAAGGGGGTCTGGAGAGGACGACTTACTCACCAGCTGGAGAGCCTGGCTCCTTTGGACTGGCGGTGATACTCCTAGAAGTCTCTGGGAA-CAAAAAAAAGGCTAAGTGT---GAAATGAAACCATATTCCCTTTCCC-ATCACCGTGCCTACTCCGAACACACACAC--GTGGGGAGGTCGAATTCCACAGCATTTAAGAAGCGCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47909240 556 + 51301725 CGTCCCCTCCTGAGGAGGTGTCAGGGCCAGATGACCCCAATTCTCTAAGTAGCATCTCTCCCTCGTGTGCTGTCACAGGACTCTGAGACAACTAACTCCGCCCCAGACAC----CGATGCTGCCTCCTTATCTGATGTATTGCAAAAGGGAAGACAGTTATAA-GGGTGGG-GAAGAGATggaatctctctttctctgaccctttttaaaatctcaaccTTCCCGCCTGATCTTAATGCGCAATTCTGAACCCCATACGCTGATATTCTGCCTTC-------ACTCTACACACTGGAACCCAAGAGCTGAGAGCTGCAGCCCCTGTGTAGACAAAGGACTTGGCTTTGGGTGAATAGATGGGTGAGAAGGAAGGGGGTCTGGAGGGGACAACTTACTCACCAGCTGGAGAGCCTGGCTCCTTTGGACTGGCGGTGATACTCCTAGAAGTCTCTGGGAA-CCaaaaaaaGGCTAAGTGT---GAAATGAAACCATATTCCCTCCCCC-GTCACTGTGCCTACTCCGAACACACACAC--GTGGGGAGGTCGAATTCCACAGCATTTAAGAAGAgcat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47614686 554 + 50890351 CCTCCCCTCCCGAGTAGGTGTCAGGGCCAGATGACCCCAATTCTCTAAGTAGCGTCTCTCCCTCGTGTGCTCTCACAAGGCTCTGAGACAACTAACTCCACCCCAGACAC----CGATGCTGCCTCCTTATCTGATGTATTGCAAAAGGGAAGACAGTTATAA-GGGTGGG-GAAGAGATGGAA--TCTCTTTCTCTGACCCTTTTTAAAATCTCAACCTTCCCTCCTGATTTTAATGTGCAATTCTGAACCCCATACGCTGATCTTCTGCCTTC-------ACTCTACACACTGGAACCCAAGAGCTGAGAGCTGCAGCCCCTGTGTAGACAAAGGACTTGGCTTTGGGTG--GAGATGGGTGAGAAAGAAGGGGGTCTGGAGAGGACAACTTACTCACCAGCTGGAGAGCCTGGCTCCTTTGGACTAGCGGTGATACTCCTAGAAGTCTCTGGGAACCAAAAAAAAGGCTAAGTGT---GAAATGAAACCATATTCCCTCCCCCTGTCACTGTGCCTACTCCGAACACACACAC--ATGGGGAGGTCGAATTCCACAGCATTTAAGAAGAGCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 16874 526 + 138250 CCCCCACTCCCCAGTAGGAGTCAGGGCAAGATGACCCCAATTCTCTAAGTAGCACCTCTCCCTCATGTGCCGTCACAGGGCTCTGAGAC----AACCCCTTCCCAGACAC------ATGCTGCCTTGTTAGCCAATGCGTTGCAAAAGAGAAGACAGTTATAAGGGGCGGG-GAAGAGATGGAA--TCTCTTTCTCTGACCCTTCAGAAAATCTCAACCTTCCCAGCTGAACTTAATGCCCAATTCTGAACCCCATACACTGATATTCCGCCTTC-------TCTCTACACACTGGAACCCAAGATCTCAGAGCTGCAGTTTCTGTATAGAGAAAGGAGTTGGCTTT------------GGGTGAGAAGGGAGAGGGTCTGGAGAGGATGACTC----ACCAGCTGGAGAGCCTGACTCCTTTGGACTGGTGGTGATACTCCTAGAAGTCTCTGGGAA-CCAAAAAAAGGCTAAGTGT---GAAATGAAACCATATTCCCTCCCCC-ATCACTGTCCCTACCCTTAACACACACAC---TTGGGAGGCAGAATTCCTTATTAC------AGAGCAT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20067262 526 - 122678785 CCTCCCCTCCTCACCAAGGATCAGGGCTAGATAAGCCAAATTCTCTAAATATCACTTC-----CACACACCCTCATGGGCCCCTGATGC----AACCCCTCCACACACACACACAGACACTACCTGGTTATTTGGCTAATTGCATTA-AAAAAACTGTCATAAAGGGCAGATAAAGAGATGGAATTTCTCTTTCCCTGATCCTTTAGAAATTTTCAACCTCCCCACCTGATCTTATTGCCCAATTCTGAGTTCCAAGGGCTTATATTTACCCTCCCCTTAATATTTTATATACCAGGACCCAAAATC--AGAGCTATAGCCTCTGCACAG-----------------------------GGGTGAGAATGAAGAGGGTCCAGAGAGGACCACTTACTCACCAGTTGGAGAGTCTGACCCCTTTGGAGAGACAGTGATAGTCCTAGAAGGCACTGGGAA-TCAAAAAGGA---AAGTATAAAGGAGTAAGACCATCTCCTGTAACCCTGTTCCTGC-CCCATCCCAAACACATGCCC---TTGTGAGGCAGAATCCCATGAC-TATAAGaggagcat i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=274203.000000 s hg38.chr19_GL949747v2_alt 661056 123 + 729520 Gggccgggcacggtgcctcatgcctataatcccagcactttgggaggctgaggtaggaggctggcttgagtccaggagttcaagaccaacctgagcaacatag-aaaaaccctatctctac--aaa s panTro4.chr19 59927143 125 + 63644993 Gggccgggcacggtgcctcatgcctataatcccagcactttgggaggctgaggcaggaggctggcttgagtccaggagttcaagaccaacctgagcaacaaag-aaaaaccctatctctacaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56860459 123 + 60714840 gggccgggcacggtgcctcatgcctataatcccagcactttgggaggctgaggcaggaggctggtttgagtccaggagttcaagaccaacctgagcaacgtgg-aaaaaccctatctctac--aaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60660795 122 + 64156825 Gggccgggcacggtgcctcacgcctgtaatcccaacactttgggaggctgaggtgggaggctggcttgagtccaggcattgaagacctacctcagcaacatgg-aaaaaccctatctctac---aa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55801818 122 + 59248254 Gggccgggcacggtgcctcatgcctgtaatcccaacactttgggaggctgaggtgggaggctggcttgagtccaggcattgaagacctgcctcagcaacatgg-aaaaaccctatctctac---aa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47909796 122 + 51301725 gggccgggcatggtgcctcatgcctgtaatcccaacactttgggaggctgaggtgggaggctggctTGAGTCCAGGCATTGAAGACCCACCtcagcaacatgg-aaaaaccctatctctac---aa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47615240 123 + 50890351 Gggccgggcatggtgcctcatgcctgtaatcccaacactttgggaggctgaggtgggaggctggcttgagtccaggcgttgaagacccacctgagcaacatggaaaaaaccctatctctac---aa i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 17400 122 + 138250 Gggctgggcacagtggctcacccctgtaatcccagcactttgggaggctgaggcaggaggatggcttgagtccaagagttcaagaccagcctaagcaacttgg-aaaaatcctatctctac---aa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20067788 0 - 122678785 C e nomLeu3.chr10 103362684 100 - 106955855 I a score=24892.000000 s hg38.chr19_GL949747v2_alt 661179 8 + 729520 aaaataca s panTro4.chr19 59927268 8 + 63644993 aaaataca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56860582 8 + 60714840 aaaataca i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60660917 8 + 64156825 aaaataca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55801940 8 + 59248254 aaaataca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47909918 8 + 51301725 aaaataca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47615363 8 + 50890351 aaaataca i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 17522 8 + 138250 aaaataca i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20067788 8 - 122678785 aaactaca i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=416263.000000 s hg38.chr19_GL949747v2_alt 661187 179 + 729520 aaaattagccaggcgtggtggcacgtgccagtaatcccagctactcagtggaggctgaggcaggaagatcacctgagccctgggaggttgaggctgcagtgagccaggattgtaccactgcactctagcctgggaaacagagcgagaccctgtcc----------aaa-------------------aaaaaaaaagcaagaactgta s panTro4.chr19 59927276 182 + 63644993 gaaattagccaggcgtggtggcacgtgccagtaatcccagctactcagtgggggctgaggcaggaagatcacctgagccctgggaggttgaggctgcagtgagccaggattgtaccactgcactctagcctgggaaacagagcgagaccctgtcc-------aaaaaa-------------------aaaaaaaaagcaagaactata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56860590 201 + 60714840 aaaattagccaggcgtggtggcatgtgccagtaatcccagctactcagtgggggctgaggcaggaagatcacctgagccctgggaggttgaggctgcagtgagccaggattataccactgcactctagcctgggaaacagagcaagaccttgtcc-------aaaaaaaaaaaaaaccaacaacaacaaaaaaaaaacaagaacaata i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60660925 178 + 64156825 aaaattagccaggcgtggtggcacgtgccagtaatcccagctactcagtgggggctgaggcaggaagatcacctgagccctgggaggtcgaggctgcagtgagccaggattgcaccactgcgctctagcctgggaaacagagcaagaccctgtcc-----------aa-------------------aaaaaaaaGgcgtgaactata i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55801948 179 + 59248254 aaaattagccaggcgtggtggcacgtgccagtaatcccagctactcagtgggggctgaggcaggaagatcacctgagccctgggaggtcgaggctgcagtgagccaggattgcaccactgcactctagcctgggaaacagagcaagaccctgtcc----------aaa-------------------aaaaaaaaagcgtgaactata i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47909926 180 + 51301725 aaaattagccaggcgtggtggcacgtgccagtaatcccagctactcagtgggggctgaggcaggaagatcacctgagccctgggaggtcgaggctgcagtgagccaggattgcaccactgcactctagcctgggaaacagagcaagaccctgccc---------aaaa-------------------aaaaaaaaagcatgaactaTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47615371 189 + 50890351 aaaattagccaggcgtggtggcacttgccagtaatcctggctattcagtgggggctgaggcaggaagatcacctgagccctgggaggttgaggctgcagtgagccaggattgcaccactgcactctagcctgggaaacagagcaagaccctgtccaagaaaaaaaaaa-------------------aaaaaaaaaaaatgaactata i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 17530 179 + 138250 aaaattagcctggcatgatgacacatgcctataatcccagctactcagtgggggctgaggcaggaagatcacctgagccctgagaggttgaggctgcagtgagccaggattgctccactgcactccagcctgggaaccagagcaagaccgtatct----------caa-------------------aaaaaaaaagcatgaactaaa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20067796 0 - 122678785 C e nomLeu3.chr10 103362684 100 - 106955855 I a score=497685.000000 s hg38.chr19_GL949747v2_alt 661366 206 + 729520 gagtcaggctgtcctccagatttgaaccccaactctatcacctattagatgtcagttatctggcaagtgactcagcatctgtgagccag-ttcccc----atgtgtccaataaaattaacaagatcccttataggttgatgtgaaagtcaagataataataatggtagaaatataaagcaccgtgcttgacat---atgagcacctcatacgtg s panTro4.chr19 59927458 206 + 63644993 gagtcaggctgtcctccagatttgaactccaactctatcacctattagatgtcagttttctggcaagtgactccgcatctgtgagccag-ttcccc----atgtgtccaataaaattaacaagatcccttataggttgatgtgaaagtcaagataataataatggtagaaatataaagcacagtgcttgacat---atgagcacctcatacgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56860791 206 + 60714840 gagtcaggctgtcct-cagatttgaaccccaactctatcacctattagatgtcagttatctggcaagtgactcagcatctgtgagccagtttcctc----gtgtgtccaataaaattaacaagatcccttataggttgatgtgaaagtcaaaataataataatggtagaaatataaagcacagtgcttgacat---atgagcatctcatacgtg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60661103 207 + 64156825 gagtcaggctgtcctccagatttgaaccccaactctatcacctgttagatgtgagctatctggcaagtgactcagcatctgtgagccggtttcccc----atgtgtccaataaaattaacgagatccctcataggttgatgtgaaagtcaagataataataacggtagtaatataaagcacggtgcttgacat---acgggcacctcatacgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55802127 207 + 59248254 gagtcaggctgtcctccagatttgaaccccaactctatcacctgttagatgtgagttatctggcaagtgactcagcatctgtaagccggtttcccc----atgtgtccaataaaattaacgagatccctcataggttgatgtgaaagtcaagataataataacggtagtaatataaagcacggtgcttgacat---acgggcacctcatacgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47910106 207 + 51301725 GAGTCAGGCTGTCCTCCAGATTTGAACCCCAACTCTATCACCTGTTAGATGTGAGTTATCTGGCAAGTGACTCAGCATCTGTGAACCGGTTTCCCC----ATGTGTCCAATAAAATTAACGAGATCCCTCATAGGTTGATGTGAAAGTCAAGATAATAATAACGGTAGTAATATAAAGCACGGTGCTTGACAT---ACGGGCACCTCATACGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47615560 205 + 50890351 gagtcaggctgtcctccagatttgaaccccaactctatcacctgttagatgtgagctatctggcaagtgactcagcatctgtgaactggtttcccc----acatgtccagtaaaattaacgagatccct--taggttgatgtgaaagtcaagataataataacggtagtaatataaagcacggtgcttgacat---acaagcacctcatacgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 17709 181 + 138250 gaatcagcctgtc---cagatttgacacccaaggctatcactta---------------------------tcagcatctgtgaagcagttttccctcctatgtgtccagtaaaattaatgatatcccttataggttggtgtgaaagtcaagatgataat---ggcagtaaaacaaagcacgctgcttgacatataatgagcacctcatacatg i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20067796 206 - 122678785 gagttggg----catctagatttgaaccccagatctatccctaattagatgtggggcctctaccaaatgacttaacatctatgagccagttttccc----atctgtcaatgaaaataattataatacatcacaggttaatgtgaaatttaaatcaataacaataataacagcacaaggcacagttcttgacatatgataagcatcccacacgtg i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=2338.000000 s hg38.chr19_GL949747v2_alt 661572 6 + 729520 ccagc-----t s panTro4.chr19 59927664 11 + 63644993 ccagctttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56860997 6 + 60714840 ccagc-----t i ponAbe2.chr19 C 0 I 608 s calJac3.chr22_GL285922_random 17890 6 + 138250 tcagc-----t i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20068002 6 - 122678785 gcagc-----t i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47615765 0 + 50890351 C e papAnu2.chr19 47910313 0 + 51301725 C e macFas5.chr19 55802334 0 + 59248254 C e rheMac3.chr19 60661310 0 + 64156825 C a score=180.000000 s hg38.chr19_GL949747v2_alt 661578 1 + 729520 t s panTro4.chr19 59927675 1 + 63644993 t i panTro4.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 17896 1 + 138250 c i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20068008 1 - 122678785 T i canFam3.chr1 C 0 I 29 e ponAbe2.chr19 56861003 608 + 60714840 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47615765 0 + 50890351 C e papAnu2.chr19 47910313 0 + 51301725 C e macFas5.chr19 55802334 0 + 59248254 C e rheMac3.chr19 60661310 0 + 64156825 C a score=2851.000000 s hg38.chr19_GL949747v2_alt 661579 22 + 729520 tttttttttt-----ttttttgagaca s panTro4.chr19 59927676 22 + 63644993 tttttttttt-----ttttttgagaca i panTro4.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 17897 27 + 138250 tctattcctcaagcatctcctgagaca i calJac3.chr22_GL285922_random C 0 I 1074 e canFam3.chr1 20068009 29 - 122678785 I e ponAbe2.chr19 56861003 608 + 60714840 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47615765 0 + 50890351 C e papAnu2.chr19 47910313 0 + 51301725 C e macFas5.chr19 55802334 0 + 59248254 C e rheMac3.chr19 60661310 0 + 64156825 C a score=25501.000000 s hg38.chr19_GL949747v2_alt 661601 275 + 729520 gagtctggctctgtctcccaggctggagtgcagtggcccgatgtcggctcacttcaacctccgcctcctgggctcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcgtccgccaccacgcccagctaagttttgtatttttagtagagatgggatttcaccatattggccaggttggttttgaactcctgaccttgtgatccgcccgcctaggcctcccaaagtgctgggattacaggcgtgagccactgcacccggccT s panTro4.chr19 59927698 275 + 63644993 gagtctggctctgtctcccaggctggagtgcagtggcccgatgtcggctcacttcaacctccgcctcctgggctcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcgtccgccaccacgcccagctaagttttgtatttttagtagagatgggatttcaccatattggccaggttggtctcgaactcctgaccttgtgatctgcccacctaggcctcccaaagtgctgggattacaggcgtgagccactgagcccagccT i panTro4.chr19 C 0 C 0 e canFam3.chr1 20068009 29 - 122678785 I e ponAbe2.chr19 56861003 608 + 60714840 I e calJac3.chr22_GL285922_random 17924 1074 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47615765 0 + 50890351 C e papAnu2.chr19 47910313 0 + 51301725 C e macFas5.chr19 55802334 0 + 59248254 C e rheMac3.chr19 60661310 0 + 64156825 C a score=23477.000000 s hg38.chr19_GL949747v2_alt 661876 18 + 729520 CCAGCTCTCttattcctc s panTro4.chr19 59927973 18 + 63644993 CCAGCTCTCTTATTCCTC i panTro4.chr19 C 0 I 562 s rheMac3.chr19 60661310 18 + 64156825 ccagttctcttatttctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55802334 18 + 59248254 ccagttctcttattTCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47910313 18 + 51301725 CCAGCTCTCTTATTTCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47615765 18 + 50890351 ccagttctcttattTCTC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20068009 29 - 122678785 I e ponAbe2.chr19 56861003 608 + 60714840 I e calJac3.chr22_GL285922_random 17924 1074 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=500135.000000 s hg38.chr19_GL949747v2_alt 661894 429 + 729520 aagtatctcctgagactcgccaggtactcagccatgtgctgggccatgggaacccaaatattaataagacattgtcaggccaggcatgacactggctgaatgcctgtaatcccagcactttgggaggccaaggtgggcggatcacctgaggtcaagagatcgagaccatcctggccaacatggtgaaaccccgtctttactaaaaatacaaaaaatag-ctgggcatggtggcacacacctgtagtcccagctactcaggagccggagattgcagtgagctgagatcgcagagtgagccgaaatcacagatcacagagtgagcagagtgagactccgtctcaaaaacaacaacaaaaaacaaaaaaaccataagacattgtccatctgcggttcccagactattgcaggagaccaaaaagtaaagcgatt s panTro4.chr19 59928553 429 + 63644993 AAGTATCTCCTGAGACTCGCCAGGTACTCAACCATGGGGTGAGCCATGGGTACCCAAATATTAATAAGACATTGTCAggccaggcatgacactggctgaatgcctgtaatcccagcactttgggaggtcgaggtgggcggatcacctgaggtcaagagatcgagaccatcctggccaacatggtgaaaccccgtctttactaaaaatacaaaaattag-ctgggcatggtggcacacacctgtagtcccagctactcaggagccggagattgcagtgagctgagatcgcagagtgagccgaaatcacagatcacagagtgagcagagtgagactccgtctcaaaaacaacaacaaaagacaaaaaaaCCataagacattgtccatctgcggttcccagactattgcaggagaccaaaaagtaaagtgatt i panTro4.chr19 I 562 C 0 s rheMac3.chr19 60661328 403 + 64156825 gagtttctcctgagactggccaggtactcagccatgtgctgggccatgggaacccacatattaataagacattgtcaggccaggcatggcactggctgaacgcctgtaatcccagcactttgggaggccaaggcaggcggatcacctgaggtcaagaaatggagaccatcctggccaacaaggtgaaaccccgtctctactaaaaatacgaaaattag-ctgggcgtggtgacgggcgcctgcagtcccagctactcaggagtcggaggttgc------------------agtgagccgaagtcacagatcccagagtgagcagagtgagactccgtctcaa----aacaac----aacaacaaaaacataagacattgtccatctgcggttctcagactattggaggagacagagaagtaaagcgatt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55802352 403 + 59248254 GAGTTTCTCCTGAGACTGGCCAGGTACTCAGccatgtgctgggccatgggaacccacatattaataagacattgtcaggccaggcatggcactggctgaacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggtcaagaaatggagaccatcctggccaacaaggtgaaaccccgtctctactaaaaatacgaaaattag-ctgggcgtggtgacgggcgcctgcagtcccagctactcaggagtcggaggttgc------------------agtgagccgaagtcacagatcccagagtgagcagagtgagactccgtctcaa----aacaac----aacaacaaaaacataagacattgtccatctgcggttctcagactattggaggagacagagaagtaaagcgatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47910331 420 + 51301725 GAGTTTCTCCTGAGACTTGCCAGGTACTCAGCCATGTGCTGGGCCATGGGAACCCACATATTAATAAGACATtgtcaggccaggcatggcacTGGctgaacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggtcaagaaatgcagaccatcctggccaacaaggtgaaaccccatctcttctaaaaatacgaaaattagcctgagcgtggtggcgcacgcctgtagtcccagctactcaggagtgggaggttgcagtgagccgagatcgcagagTGAGCCGAAGTCACAGATCCCAGAGtgagcagagtgagactccgtctcaa----aacaac----aacaacaaaaacataagaCATTGTCCATCTGCGGTTACGAGATTATTGGAGGAGAC--AGAagtaaattgatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47615783 413 + 50890351 GAGTTTCCCCTGAGACTTGCCGGGTAATCAGccatgtgctgggccatgggaacccacatattaataagacattgtcaggccaggcatggcactggctgaacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggtcaagaaatggagaccatcttggccaacaaggtgaaaccccgtctctactaaaaatacgaaaattag-ctgggcatggtggcgcacgcctgtagtcccagctactcaggagtcggaggttgcagtgagccgagatcgcagagtgagccgaagtcacagatcctagagtgagcagagtgagactccgtctcaa--------------aacaacaaaaacataagacattgtccatctgcggttcccagaccattggaggagac--agaagtaaagcaatt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20068009 29 - 122678785 I e ponAbe2.chr19 56861003 608 + 60714840 I e calJac3.chr22_GL285922_random 17924 1074 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=96876.000000 s hg38.chr19_GL949747v2_alt 662323 98 + 729520 -tttttttttttt---taatacggagtctcactctgttgcccaggctggagtgctgtggtgtgatctcaggtcactgcaacctccaactcgtgagttcaagc s panTro4.chr19 59928982 96 + 63644993 -tttttttttaa-----aatacggagtctcactctgttgcccaggctggagtgctgtggtgtgatctcaagtcactgcaacctccaactcctgggttcaagc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60661731 86 + 64156825 -tttttttttttc-----atatggagtctcactctgttgcccaggctgga----------gtgatctcagctcactgcaacctccaactcctgggttcaagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55802755 87 + 59248254 -tttttttttttt----aatatggagtctcactctgttgcccaggctgga----------gtgatctcagctcactgcaacctccaactcctgggttcaagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47910751 87 + 51301725 -tttatttttttt----aatatggagtttcagtatgttgcccaggctgga----------gtgatctcagctcactgcaatctccaactcctgggttcaagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47616196 89 + 50890351 -tttttttttttt--taaatatggagtctcactctgttgcccaggctgga----------gtgatctcagctcactgcaacctccaactcctgggttcaagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 18998 69 + 138250 tttttgtatttttagtagagacagggtttcaccatgttgaccaggatcgt-------------------------------ctcgatctcttgaccttgt-- i calJac3.chr22_GL285922_random I 1074 C 0 e canFam3.chr1 20068009 29 - 122678785 I e ponAbe2.chr19 56861003 608 + 60714840 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=310586.000000 s hg38.chr19_GL949747v2_alt 662421 146 + 729520 gattctcctgcctcagcctcccaagtagctggaattacaggtgcccaccaccacgcccggcta---------------------------atttttgtattttcagtagagacggggtttcagcatgttggccaggctggt------ctcctgacctcaggtgatccactcaccttggc s panTro4.chr19 59929078 146 + 63644993 aattctcctgcctcagcctcccaagtagctggaattacaggtgcccaccaccacgcccggcta---------------------------atttttgtattttcagtagagatggggtttcagcatgttggccaggctggt------ctcctgacctcaggtgatacactcaccttggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56861611 146 + 60714840 gattctcttgcgtcagcctcccaagtagcgggaattacaggtgcccgccaccacgcctggcta---------------------------atttttgtattttcagtagagacggggtttcagcatgttggccaggctggt------ctcctgacctcaggtgatccacccaccttggc i ponAbe2.chr19 I 608 C 0 s rheMac3.chr19 60661817 146 + 64156825 gattctcctgcctcagccttgcaagtagccggaattacaggtgcccgccaccacgcccggcta---------------------------atttttgtatttttagtagagacagggtttcaccctgttggccacactggt------cccctgacctcaggtgatccacccgccttggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55802842 146 + 59248254 gattctcctgcctcagccttgcaagtagccggaattacaggtgcccgccaccacgcccggcta---------------------------atttttgtattttcagtagagacagggtttcaccctgttggccacactggt------cccctgacctcaggtgatccacccgccttggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47910838 146 + 51301725 gattctcctgcctcagccttgcaagtagctggaattacaggtgcccgccaccacgcccggcta---------------------------atttttgtattttcagtagagacagggtttcaccatgttgcccaggctggt------ctcccgacctcaggtgatccacccgccttggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47616285 146 + 50890351 gattctcctgcctcagccttgcaagtagctggaattacagttgcccgccaccacacccggcta---------------------------atttttgtattttcagtagagacagggtttcaccatgttggccagactggt------cccctgacctcaggtgatctacccgccttggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 19067 179 + 138250 aatccaccctccttggcctcccaaagtgctgggattataggcgtgagccactgcgcccggccAATGCCCAATTCTTAACCCCCAGTAGAGatttttgtatttttagtaaagaataggtttcaccatgctggccaggctggtctcgaactccagacctcaggtgatccgcccaccttggc i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20068009 29 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=857856.000000 s hg38.chr19_GL949747v2_alt 662567 344 + 729520 ctcccaaagtgctgggattacagacaaagcgataattttaatatactgtaaaaattgctgtaataggcagcccacaagacactgagcgagagcagaggaaaccat-cgatccagcctggacggtcaaggctttcttgaggaattgatgccatggggaaatggaagaaaaggcagagtgagtgggttgggtgcagagtcaggagaggttaggaagcctccaggagagCTTCAAGTGACTGTGTGTGGCTGAGAACAGCATGGGAA-TGCGTGGAAGGTATGCAGACAAAATTGGA------------GGGATCAACAGGGGCTGG------------ATATCTAAGCTCACAGAATAGCAAGCTGAGGAAT s panTro4.chr19 59929224 344 + 63644993 ctcctaaagtgctgggattacagacaaagtgataattttaatacactgtgaaaattgctgtaataggcagcccacaagacactgagcgagagcagaggaaaccat-cgatccagcctggacggtcaaggctttcttgaggaattgatgccatggggaaatggaagaaaaggcagagcgagtgggttgggtgcagagtcaggagaggttaggaagcctccagaagagCTTCAAGTGACTGTGTGTGGCTGAGAACAGCATGGGAA-TGCGTGGAAGGTATGCAGACAAAATTGGA------------GGGATCAACAGGGGCTGG------------ATATCTAAGCTCACAGAATAGCAAGCTGAGGAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56861757 344 + 60714840 ctcccaaagtgctgggattacagacAAAGCGACAATTTTAATATACTGTGAAAATTGCTGTAATAGGCAGCCCACAAGACactgagcgagagcagaggaaaccac-cgatccagcctggacagacaaggctttcttgaggaattgacTCCATGGGGAAATGGAAGAAAAGGCAGAGCAAGTGGCTTGGGTGCAGAGTCAGGAGAGGTTAGGAAGCCTCCAGAAGAGCTTCAAGTGACTGTGTGTGGCTGAGAACAGCATGGGAA-TGTGTGGAAGGTATGCAGACAAGATTGGA------------GGGATCAACAGGGGCTGG------------ATATCTAAGCTCCCAGAACAGCAAGCTGAGGAAC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60661963 343 + 64156825 ctcccaaagtgcggggacgacag-caaagcgataattttaatacactgtgaaaattgctgtaatagacagcccacaagacactgagcaagagcagaggaagccac-caatccagcctggacggccaaggctttcgtgaggaattgaGGCCATGGGGAAATGGAAGAAAAGGCAGAGCAAGTAGATTGGATGCAGAGTCAGGAGAGGTTAGGAAACCTCCCGAAGAGATTCAAGTGACTGTGCGGGGCTGAGAACAGCGTGGGAA-TGAATGGAAGGTACGCAGACAAGATTGGA------------GGGATCAACAGTGGCTGG------------ATATCTACGCTCATGGAATAGCAAGCTGACGAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55802988 343 + 59248254 ctcccaaagtgcggggacgacag-caaagcgataattttaatacactgtgaaaattgctgtaatagacagcccacaagacactgagcgagagcagaggaagccac-caatccagcctggacggccaaggctttcgtgaggaattgaGGCCATGGGGAAATGGAAGAAAAGGCAGAGCAAGTAGATTGGATGCAGAGTCAGGAGAGGTTAGGAAACCTCCCGAAGAGATTCAAGTGACTGTGCGGGGCTGAGAACAGCGTGGGAA-TGAATGGAAGGTACGCAGACAAGATTGGA------------GGGATCAACAGTGGCTGG------------ATATCTACGCTCATGGAATAGCAAGCTGACGAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47910984 343 + 51301725 ctcccaaagtgtggggatgaCAG-CAAAGCGACAATTTTAATACACTGTGAAAATTGCTGTAATAGACAGCCCACAAGACACTGAGCGAGAGCAGAGGAAGCCAC-GAATCAAACCTGGACGGCCAAGGCTTTCATGAGGAATTGAGGCCATggggaaatggaagaaaaggcaGAGCAAGTAGATTGGATGCAGAGTCAGGAAAGGTTAGGAAGCCTCCCGAAGAGATTAAAGTGACCGTGTGGGGCTGAGAACAGCGTGGGAA-TGAATGGAAGGTGTGCAGACAAGATTGGA------------GGGATCAACAGTGGCTGG------------ATATCTAAGCTCATGGAATAGCAAGCTGACGAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47616431 343 + 50890351 ctcccaaagtgcggggacgacag-caaagcgataattttaatatactgtgaacattgctgtaatagacagcccacaagacactgagcgagagcagaggaagccac-caatccagcctggacggccaaggctttcgtgaggaattgacGCCATGGGGAAATGGAAGAAAAGGCAGAGCAAGTAGATTGGATGCAGAGTCAGGAGAGGTTAGGAAGCCTCCAGAAGAGATTCAAGTGACTGTGTGGGGCTGAGAACAGCGTGGGAA-TGAATGGAAGGTATGCAGACAAGATTGGA------------GGGATCAACAGTGGCTGG------------ATATCTAAGCTCATGCAATAGCAAGCTGACAAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 19246 345 + 138250 ctcccaaagtgctgggatgacaggcAAAGCGATCCTTGTAATATACTGTGAAATTTGCTGTAAGAGTCAGCCCACAGGACACTGAGCAAGAGCAGAGAAAACCAC-CAATGCAGCCTGGATGGTCAAGGTTTTCTTGAGGAATCGGTGCCATGGGGAAATGGAAGGAAAGGAAAAGCAAGTGGCTTGGGTGCAGAGGCAGGAGAGGATAGGGAGCCTCCAGAAGAGCTTCAGGTGCCTGTGTGTGGCTGAGAACAGCACGGGGACTGCATGGAAGGTATGCAGACAGGATTGGA------------GGGATCAGCAGCGGCTGA------------GTGTCTAAGCTCATGGAACAGCAAGCTGAACAAT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20068038 338 - 122678785 CTTACCAGGTGCTCAGCCAGCAG-ACAGGTGCATATTTTAATATACTGTGTAAATTGACATAACAGGCAGTCCATAGGA-------------CAGAGGAAGCTATACAACCCAGT---GTCATAAAAGGCTTTCCTGAGAGACTGAGGCCATGAGGAAATAGAAGGAAAAACAGAGCAAGTGGCTTGGATGCAGAATCAGGAGAAGATGCCAAGGATCCAGGAGAGCTTCATCTGACTCTGTGTGGCTAAGATTTGCATGAGGA-------------ATGAAGACAAGA--GGATCAACGGAGTCTGGGATGAGCAGTGGCTGATCTAAGGGCATTGGGCCTAAAAGCATTGAATATCAAGCTAAGAAAT i canFam3.chr1 I 29 I 1070 e nomLeu3.chr10 103362684 100 - 106955855 I a score=142241.000000 s hg38.chr19_GL949747v2_alt 662911 62 + 729520 TGGAACTGCATCCTGAGGGTGATTGGGAGGTTCCGAACTGAAGATAGGGAAGGCTTCCATCA s panTro4.chr19 59929568 62 + 63644993 TGGAACTGCATCCTGAGGGTGATTGGGAGGTTCCGAACTGAAGATAGGGAAGGCTTCCATCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862101 62 + 60714840 TGGAACTGCATCCGGAGGGTGATTGGGAGGTTCTGAACTGAAGATAGGGAAGGCTCCCATCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60662306 62 + 64156825 TGGAACTGCATCCTGAGGGTGACTGGGAGGTTCTGAACTGAAGATAGAGAAGGACCCCATCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55803331 62 + 59248254 TGGAACTGCATCCTGAGGGTGACTGGGAGGTTCTGAACTGAAGATAGAGAAGGACCCCATCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47911327 62 + 51301725 TGGAACTGCATCCTGAGGGTGACTGGGAAGTTCTGAACTAAAGATAGGGAAGGACCCCATCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47616774 62 + 50890351 TAGAACTGCATCCTGAGGGTGATTGGGAGGTTCTGAACTAAAGATAGGGAAGGACACCATCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 19591 62 + 138250 TGGAACTGCATCCTGAGGGTGACCGGGAGGTCCTGAAGCGAAGATAGGGAAGGAGCCCACCA i calJac3.chr22_GL285922_random C 0 I 6 e canFam3.chr1 20068376 1070 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=522374.000000 s hg38.chr19_GL949747v2_alt 662973 310 + 729520 C------AGAACTCCCTGGGATATgccgggcgcggtggctcatgcctccaatcccagcactttgggaggccgagacaggtggatcatgaggtcaggagttcaagaccagccttcccaagatgctgaaaccccgtctctactaaaa-tacaaaaattagccaggtgtggtggcatgcacctataatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggcagcagaggttacagtgagccgagatcgcaccactgcactccagcctgggcgacagagcaagactccacctcaaaaaaataaaaaa s panTro4.chr19 59929630 295 + 63644993 C------AGAACTCCCTGGGATATgccgggcgcggtggctcatgcctgcaatcccagcactttgggaggccgag----------------gtcaggagttcaagaccagcctgcccaagatgctgaaaccccgtctctactaaaaatacaaaaattagccaggtgtggtggcacgcacctataatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggcagcagaggttacagtgagccgagatcgcaccactgcactccagcctgggcgacagagcaagactccacctcaaaaaaataaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862163 311 + 60714840 C------AGAACTGCCTGGGATATgccgggcgcagtggctcatgcctgcaatctcagcactttgggaggccgagacgggtggatcacgaggtcaggagttcaagaccagcctgcccaagatgctgaaaccccgtctctactaaaaatacaaaaattatccaggcgtggtggcacgcacctacaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggcggcagaggttacagtgagccgagatcgcaccactgcactccagcctgggcgacagagcaagactccacctcaaaaaaataaaaaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60662368 315 + 64156825 CAGGGTTAGAACTCTCTGGGATATgccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaagacgggtggatcccaaggtcaggagttcaacaccagcctggccaagatgctgaaaccccgtctataattaaaaaacaaaaattagccaggcgtggtggcgggcacctgtaatctcagctactg-ggaggctggggcaggagaatcgcttgaacccgggcagcagaggtaccagcgagccgagatctcgcccctgcactacatcctgggtgacagagcaagactctacctctaaaaaataaaaa- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55803393 315 + 59248254 CAGGGTTAGAACTCTCTGGGATATgccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaagacgggtggatcccaaggtcaggagttcaagaccagcctggccaagatgctgaaaccccgtctctactaaaaatacaaaaattagccaggcgtggtggcgggcacctgtaatctcagctactt-ggaggctggggcaggagaattgcttgaacccgggcagcagaggttacagcgagccgagatctcgcccctgcactacagcctgggtgacagagcaagactctacctctaaaaaataaaaa- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47911389 315 + 51301725 CAGGGTTAGAACTCTCTGAGatatgccgggcgcagtggctcatgcctgtaatcccagcactttgggaggccaagacgggtggattccaaggtcaggagttcaagaccagcctggccaagatgccgaaaccccgtctctactaaaaatacaaaaattagccaggcatggtggcacgcacctgtaatctcagctactt-ggaggctggggcaggagaatcgcttgaacccgggcagcagaggttacagtgagccaagatctcgccactgcactacagcctgggtgacagagcaagacaccacctctaaaaaataaaaa- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47616836 315 + 50890351 CAGGGTTAGAACCCTCTGGGATATgccggacgcagtggctcacgcctgtaatcccagcactttgggaggccgagatgggtggatcccaaggtcaggagttcaagaccagcctggccaagatgctgaaaccccgtctctactaaaaatacaaaaattagccaggcgtggtggcgcgcacctgtaatctcagctactt-ggagtctgaggcaggagaatcgcttgaacccgggcagcagaggttacagcgagccgagatctcgccactgcactacagcctgggtgacagagcaagactccacctcaaaaaaataaaaa- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20068376 1070 - 122678785 I e calJac3.chr22_GL285922_random 19653 6 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=478413.000000 s hg38.chr19_GL949747v2_alt 663283 212 + 729520 ta------gaaCTACGTGGGATCAGGTGCCTCAT-GAAAGCCAGAGTCATGTGGGCCCAGTGGAAGTATCTAACCTATTATCAGGGAATCTGTGAAGGTGT---TTAGTCTGGAAGGAAATGGAGA-TTTTCCAGGACAGGCAAGGGGAAAGAGAC--------TGAGGAAAGCGTATCTGCAGAGGCCTGGAGCGGTTAGAAGATGTGCTGTGTCCAGGTGCCTACAGTC s panTro4.chr19 59929925 218 + 63644993 taaaaatagaaCTATGTGGGATCAGGTGCCTCAT-GAAAGTCAGAGTCATGTGGGCCCAGTGGAGGTATCTAACCTATTATCAGGGAATCTGTGAAGGTGT---TTAGTCTGGAAGGAAATGGAGA-TTTTCCAGGACAGGCAAGGGGAAAGAGAC--------TGAGGAAAGTGTATCTGCAGAGGCCTGGAGCGGTTAGAAGATGTGCTATGTCCAGGCGCCTACAGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862474 218 + 60714840 taaaaatagaaCTATCTGGGATCAGGTGCCTCAT-GAAAGCCAGAGTCATGTGGGCCCAGTGGAGGTAGCTAACCTATTATCAGGGAATCTGTGAAGGTGT---TTAGTCTGGAAGGAAATGGCGA-TTTTCCAGGAAAGGCAAGGGGAAAGAGAC--------TGAGGAAAGCGTATCTGCAGAGGCCTGGAGCGGTTAGAAGATGTACTATGTCCAGGCGCCTACAGTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60662683 207 + 64156825 ------tagaaCTCTC--GGATCAGGTACCTCAT-GAAAGCAAGAGTCCCGTGGGCCCAATGGAGATACCTCACC---TATTAGGGAATCCGTGAAGGTGT---TTAGTCTGGAAGGAAATGGGGA-TTTTCCAGGAAAGGCAAGGGGAAAGAGAC--------TGAGGAAAGCGTATCTGCAGAGGCCTGGAGTGGTTAGAAGATGTTCTAGGTCCAGGCGCCTACAGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55803708 207 + 59248254 ------tagaaCTCTC--GGATCAGGTACCTCAT-GAAAGCAAGAGTCCCGTGGACCCAATGGAGATACCTCACC---TATTAGGGAATCCGTGAAGGTGT---TTAGTCTGGAAGGAAATGGGGA-TTTTCCAGGAAAGGCAAGGGGAAAGAGAC--------TGAGGAAAGCGTATCTGCAGAGGCCTGGAGTGGTTAGAAGATGTTCTAGGTCCAGGCGCCTACAGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47911704 210 + 51301725 ------tagaactctc--GGATCAGGTACCTCAT-GAAAGCAAGAGTCCCGTGGGCCCAATGGAGATACCTCACCTGTTATCAGGGAATCCGTGAAGGCGT---TTAGTCTAGAAGGAAATGGGGA-TTTTCCAGGAAAGGCAAGGGGAAAGAGAC--------TGAGGAAAGCGTATCTGCAGAGGCCTGGAGTGGTTAGAAGATGTTCTAGGTCCAGGCGCCTACGGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47617151 212 + 50890351 ------TAGTACTCTCTGGGATCAGGTGCCTCGT-GAAAGCAAGAGTCCCGTGGGCCCAATGGAGATGCCTAACCTATTATCAGGGAATCCGTGAAGGTGT---TTAGTCTGGAAGGAAATGGGGA-TTTTCCAGGAGAGGCAAGGGGAAAGAGAC--------TGAGGAAAGCGTATCTGCAGAGGCCTGGAGTGGTTAGAAGGTGTACTAGGTCCAGGCGCCTACAGTC i chlSab2.chr6 C 0 I 92 s calJac3.chr22_GL285922_random 19659 218 + 138250 ------TAGAACCCTCTGCGATCAGGTGCCTCAT-GAAAGCCGGAGTCACGTGGGCCCAGCGGAGATAGCTAGCCTGTTATCAGGGAATCTGTGAAGGTGTTTATTAGTCTGGAAGGAAATGAC-A-CTTCCCAGGAAAAGCAAGGGGGAAGAAAC-TGCAGTGTGAGGAAGGCGTATCCGCAGAGCACTGGAGTGGTTAGA---TGTACGGTGTCCAGGCACCTACCCTC i calJac3.chr22_GL285922_random I 6 C 0 s canFam3.chr1 20069446 203 - 122678785 ------TAGAATTTGCTGGCATCAGGAATCGAGCAGAAAGCTAGAGTCAGGTGGACCCAGTCGAGATATCAGAACTATCCTCAAGGGATCTGC-AAGGTTT---TCTGTCTTGAGGAAAATTGATACTTTTCTAAGAAAAGGAAGGGGAAAGAGAGCTACAACATGAGGGAAGTATGT-TGCACAGAACTGCAGGAGTAAGAGGAAGCAGTGAG----------------- i canFam3.chr1 I 1070 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=8022.000000 s hg38.chr19_GL949747v2_alt 663495 4 + 729520 TGTG s panTro4.chr19 59930143 4 + 63644993 TGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862692 4 + 60714840 TGTG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60662890 4 + 64156825 TGTG i rheMac3.chr19 C 0 I 30 s macFas5.chr19 55803915 4 + 59248254 TGTG i macFas5.chr19 C 0 I 30 s papAnu2.chr19 47911914 4 + 51301725 TGTG i papAnu2.chr19 C 0 I 30 s calJac3.chr22_GL285922_random 19877 4 + 138250 TGTG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20069649 0 - 122678785 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617363 92 + 50890351 I a score=332687.000000 s hg38.chr19_GL949747v2_alt 663499 157 + 729520 TGCGTCC-GAGCATGGGCTCTACCTGGACACAGTGAGGAGC-GAGATTAAATACCTGG-ATCACAGCCGAGTCCAAA-GCCTAGGACT----------------TCATCCTGGGAGCAGTGCGTAGGGATGG----CGGTCGT-CCCGCCACAGCCTTG-----------------------------------------------------GCTCCGCCATCTTTGAAATGGCC s panTro4.chr19 59930147 161 + 63644993 TGCGTCC-GAGCACGGGCTCTACCTGGACACAGTGGGGAGC-GAGATTAAATACCTGG-ATCACAGCCAAGTCCAAA-GCCTAGGACT----------------TCATCCTGGGAGCAGTGCGTAGGGATGGGTGGCGGTCGT-CCCGCCACAGCCTTG-----------------------------------------------------GCTCCGCCATCTTTGAAATGGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862696 162 + 60714840 TGCGTCC-GAGCACGGGCTCTACCTGGACACAGTGGGGAGC-AAGATTAAATACCTGGAATCACAGCCAAGTCCAAA-GCCTAGGACT----------------TTATCCTGGGAGCAGTGCGTAGGGATGGGTGGCGGTCTT-CCCGCCACAGCCTTG-----------------------------------------------------GCGCCGCCATCTTTGAAATGGCC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60662924 159 + 64156825 TGCGTCC-AAGCGCGGGCTCTGCCTGGACACAGCGGGGAGC-AAGATTAAATACTCGG-ATCACAGCCAAGTCCAAAGGCCTAGAACT----------------TTATCCTGGGAACAGTGTGTAGGGATAGCTGGCGGTGTT-CCCACCACAGCCTTG-----------------------------------------------------GCC---CCGTCTTTGAAATGGCC i rheMac3.chr19 I 30 C 0 s macFas5.chr19 55803949 162 + 59248254 TGCGTCC-GAGCGCGGGCTCTGCCTGGACACAGCGGGGAGC-AAGATTAAATACTCGG-ATCACAGCCAAGTCCAAAGGCCTAGGACT----------------TTATCCTGGGAACAGTGTGTAGGGATAGCTGGCGGTGTT-CCCACCACAGCCTTG-----------------------------------------------------GCCCCGCCGTCTTTGAAATGGCC i macFas5.chr19 I 30 C 0 s papAnu2.chr19 47911948 162 + 51301725 TGCGTCC-GAGCACGGGCTCTACCTGGACACAGTGGGGAGC-AAGATTAAATACTCGG-ATCACAGCCCAGTCCAAAGGCCTAGGACT----------------TTATCCTGGGAGCAGTGCGTAGGGATAGCTGGCGGTGTT-CCCACCACAGCCTTG-----------------------------------------------------GCCCCGCCGTCTTTGAAATGGCC i papAnu2.chr19 I 30 C 0 s chlSab2.chr6 47617455 162 + 50890351 TGCGTCC-GAGCACGGGTTCTACCTGGACACAGTGGGGAGG-AAGATTAAATACTCGG-ATCACAGCCCAGTCCAAAGGCCTAGGACT----------------TTACCCTGGGAGCAGTGCGTAGGGATAGCTGGCGGCGTT-CCCGCCACAGCCTTG-----------------------------------------------------ACCCCGCCGTCTTTGAAATGGCC i chlSab2.chr6 I 92 C 0 s calJac3.chr22_GL285922_random 19881 232 + 138250 TGTGGCTAGACCATGGGCTCTATATGGACACAGGGAGGAGC-AAGATTAAATCCTTGG-ATCACAGCCAAGTCAGAAGGGCGCAGTCTTCCCATCACAGCCTCGTTATCCTGGGAGCGGTGCGTAGGGAAGGGCAGCAGTCTT-CCCATCACAGCCTTGTTATCCTGGGAGTGGTGCATAGGGAAGGGCAGCAGTCTTCCCATCACAGCCTTGCTCTGCCATCTTTGAAATGGCC i calJac3.chr22_GL285922_random C 0 I 306 s canFam3.chr1 20069649 115 - 122678785 ------------------------------CAATGGGGGACAAAGCTTACACACATGC-ATCAGAGCAAAGTCAGAA---------------------------T---------AGCAGCGTGTAGGAATGAGCAATGGTCTTCCCCATCAGCCCCTTG-----------------------------------------------------GCTCCACCATCTTTGAAATGGCA i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=300341.000000 s hg38.chr19_GL949747v2_alt 663656 119 + 729520 CCATCACCCAAAACGCTCCTCCTTCTGAAC-CCCAGAGCTCCACTCTGCACCCATGCTCTAGCCTCACACCAAGGACTTTCTTGGTAAGAGACGGACAGTTCGGTGAAGT-GATTAAAAGC s panTro4.chr19 59930308 118 + 63644993 C-ATCACCCAAAATGCTCCTCCTTCTGAAC-CCCAGAGCTCCACTCTGCACCCATGCTCTAGCCTCACACCAAGGACTTTCTTGGTAAGAGACGGACAGTTCGGTGAAGT-GATTAAAAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862858 119 + 60714840 CCATTACCCAAAATGCTCCTCCTTCTGAAC-CCCAGAGCTCCACTCTGCACCCATGCTCTAGCCTCACACCAAGGACTTTCTTGGGAAGAGACAGACAGTTCAGTGGAGT-GATTAAAAGC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60663083 119 + 64156825 CCAATACCCAAAATGCTCCTCCTCCTGAAC-CCCAGAGCTCCCCTCTGCGCCCATGCTCTATCCTCACACCGAGGACTTTCCTGGGAAGAGACAGACAGTTCCGTGAAGC-GATTAAAAGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55804111 119 + 59248254 CCAATACCCAAAATGCTCCTCCTCCTGAAC-CCCAGAGCTCCCCTCTGCGCCCATGCTCTATCCTCACACCGAGGACTTTCCTGGGAAGAGACAGACAGTTCCGTGAAGC-GATTAAAAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47912110 119 + 51301725 CCATTACCCAAAATGCTCCTCCTCCTGAAC-GCCAGAGCTCCCCTCTGCGCCCATGCTCTATCCTCACACCAAGGACTTTCTTGGGAAGAGACAGACAGTTCCGTGAAGC-GATTAAAAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47617617 119 + 50890351 CCGTTACCCAAAATGCTCCTCCTCCTGAAC-CCCAGAGCTCCCCTCTGCGCCCATGCTCCGTCCTCACACCGAGGACTTTCTTGGGATGAGACAGACAGTTCCGTGAAGC-GATTAAAAGC i chlSab2.chr6 C 0 T 5744 s calJac3.chr22_GL285922_random 20419 119 + 138250 CCATTACCCAAAATGCTCCTCCTCCTGAAC-CCCAGAACTCCACTCCACAGCCATGCTCCATCCTCACACCAAGGACCTTCTTGGGAAGAGACAGACAGTGTGGTGAAGC-GATGAAAAGC i calJac3.chr22_GL285922_random I 306 C 0 s canFam3.chr1 20069764 119 - 122678785 -CATTATCCAAAAACCTTATCTGTCTGCACACTCAGAGCCCACCTCCAT-CCCATCCTTGATCCTCAAACCAAGGACTTTATTTGGAAGAGTCAAGTTATCTCCTGAAGCAGACTTAAAGC i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=606449.000000 s hg38.chr19_GL949747v2_alt 663775 299 + 729520 CTACAGGCTTAGATAATGGAAGAGAGAGCTCCGTCCTCACACTCCTTTCTGCTGAGCATGAAATGCCTGGTTACTCACCAGTTGTGAAGACTTCGTTTGTGAATGAGACGGTCAGTTCAGCGGTGGCTTCTGAGAATTCT---AAGAA---------AGCAA----------AACAATGTTAGGTCTTCCCCGTGGTTCCCTATATCCTCTAGATATCTCCATTCCCCTTTTGAGATATCTAGGCTCCCTGAAACCCCTT--TCTCTG--ACACACTGCACAGACACTGAAGACAGACAAATTCGAAAGG-TGTAAGACTTATCTT--- s panTro4.chr19 59930426 308 + 63644993 CTACAGGCTTAGATAATGGAAGAGAGAGCTCCGTCCTCACACTCCTTTCTGCTGAGCATGAAATGCCTGGTTACTCACCAGTTGTGAAGACTTTGTTTGTGAATGAGATGGTCAGTTCAGCGGTGGCTTCTGAGAATTCT---AAGAATTATAAGAAAGCAA----------AACAACGTTAGGTCTTCCCCGTGGTTCCCTATATCCTCTAGATATCTCCATTCCCCTTTTGAGATATCTAGGCTCCCTGAAACCCCTT--TCTCTG--ACACACTGCACAGACACTGAAGACAGACAAATTCGAAAGG-TGTAAGACTTATCTT--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862977 310 + 60714840 CTATAGGCTTAGATAATGGAAGAGAGAGCTCCGTCCTCACACTCCTTTCTGCTGAGCATGAAATGCCTGGTTACTCCCCAGTTGTGAAGACTTTGTTTGTGAATGAGACGGTCAGTTCAGCGGTGGCTTCTGAGAATTTT---AAGAATTATAAGAAAGCAA----------AACAATGTTAGGTCTTCCCCGTGGTTCCCTATATCCTCTAGATATCTCCATTCCCCTTCTGAGATATCTAGGCTCCCTGAAACCCCTT--TCTCTGACACACACTGCACAGACACTGAAGACAGACAAATTCGAAAGG-TGTAAGACTTATCTT--- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60663202 310 + 64156825 CTATAGGCTTAGATAGTGGAAGAGAGAGCTCCGTCCTCACACTCCTTTCTGCTGAGCATGAAATGCCTGGTGACTCACCAGTTGTGAAGACTTTGTTTGTGAGTGAGACGGTCAGTTCAGTGGTGGCTTCTGAGAATTCT---AAGAATTATAAGAAAGCAA----------AACAATGTGAGGTCTTCCCCGTGGTTCCCTATATCCTCTAGATACCTCCATTCCTCTTCTGAGATGTCTAGGCTCCCTGAAACCCCTT--TCTCTGACACACACAGCGCAGACGCTGAATACAGACAGATTTAAAAGG-TGTAAGACTTATCTT--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55804230 310 + 59248254 CTATAGGCTTAGATAGTGGAAGAGAGAGCTCCGTCCTCACACTCCTTTCTGCTGAGCATGAAATGCCTGGTGACTCACCAGTTGTGAAGACTTTGTTTGTGAGTGAGACGGTCAGTTCAGTGGTGGCTTCTGAGAATTCT---AAGAATTATAAGAACGCAA----------AACAATGTGAGGTCTTCCCCGTGGTTCCCTATATCCTCTAGATACCTCCATTCCTCTTCTGAGATGTCTAGGCTCCCTGAAACCCCTT--TCTCTGACACACACAGCGCAGACGCTGAATACAGACAGATTTAAAAGG-TGTCAGACTTATCTT--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47912229 310 + 51301725 CTATAGGCTTAGATAGTGGAAGAGAGAGCTCCGTCCTCACACTCCTTTCTGCTGAGCATGAAATGCCTGGTGACTCACCAGTTGTGAAGACTTTGTTTGTGAGTGAAACGGTCAGTTCAGTGGTGGCTTCTGGGAATTCT---AAGaattataagaaagcaa----------aacaatgtGAAGTCTTCCCCGTGGTTCTCTATATCCTCTAGATACCTCCATTCCTCTTCTGAGATGTCTAGGCTCCCTGAAACCCCTT--TCTCTGACACACACAGCGCAGACGCTGAATACAGACAGATTCGAAAGG-TGTAAGACTTATCTT--- i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 20538 315 + 138250 CTCTAGGCTTAGGCAGTGGAAGAGAGAGCTCTGTCCTCACGCTCCTTTCTGCTGAGCATGCAATGCCTGGTTACTCACCAGTTGTGAAGACTTTGTTTGTGAGTGAGATGATCAGTTTACTGGTGGCCTCTGGGAATGCTCAGGAGAATTACAAGAAAGCAA----------AACAATGTTAGGTCTTCCTCGTGGCTCCCTATATCCCCTAGATACCTCCATTGCCCTTGTGAAATATCTAGGCTCCCTGAAACCCCTTTCTCTCTGACGGACACTGCACAGACATTGAAGACAGACAAATTCAAAATG-TATAAGACttttttt--- i calJac3.chr22_GL285922_random C 0 I 8591 s canFam3.chr1 20069883 305 - 122678785 CTACGGCCTTAGATGATGAAAGAGAAA--TCTATCTACATACTCCTTTCTACTGGGTTCCGAGTGCCTGATTACTCACCAATTGTGGAGCTCTTGTTGAGGTGCAAGTTGCTCTGTTTTCTGGAGGCTTCTGGGAATTCT---AAG-----CAAGAGGGTAATGAGAACATGGATAACATCAGATCTTCCCAGTGAGTCCCTAC------------TCTGCATACCCTTTCTGAGCTGTCTGGGCTTCCCAGAACCCCTT--TCTCTGGCACACACTGCATGAACACTGAGGAGAGAAAAAAGCAGAGGGCTATAAGACATGTTCTCTT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=273656.000000 s hg38.chr19_GL949747v2_alt 664074 217 + 729520 ----CCATGACCGGCTTAGTAAGAAGCAGatccgttcagcaattgatagacacttggttttttttccacgttttgctgttatgaatattgctgctgtgaacattgacgtacaggtttttgtgtgaacataagttttctgttctctt----------gggtacacacccaggggtggtggaatcactgggtcatacagtaactctgtgttttac------------tttttgaagaactaccag s panTro4.chr19 59930734 216 + 63644993 ----CCATGACCGGCTTAGTAAGAAGCAGatccgttcagcaattgatagacccttgggtttttt-ccacgttttgctgttatgaatattgctgctgtgaacattgacgtacaggtttttgtgtgaacataagttttctgttctctt----------gggtacacacccaggggtggtggaatcactgggtcatacagtaactctgtgttttac------------tttttgaagaaccaccag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56863287 211 + 60714840 ----CCATGACTGGCTTAGTAAGAAGCAGatccgttcatcaattgatagacacttgggttt----ccacgttttgttgttatgaatattgctgctgt-aacactgacatacaagtttttgtgtgaacataagttttctgttctctt----------gggtacacacccaggtgtggcagaattactgggtcatacagtaactctgtgttttac-------------ttttgaagaactaccag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60663512 223 + 64156825 ----CCATCGCCGGCTGAGTAAGAAGCAGatctgttcatcagttgctgggcacttgggtttttt-ccacgttttgctattgtgaatattgctgctgtgaacattcacatacaagtttttgtgtgatcataagttttctgttctctt----------gggcacacacccaggtgtgattgaatcactgggtcatagagtaactctgtgttttacttttta-----ctttttgaaaaactaccag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55804540 223 + 59248254 ----CCATCGCCGGCTGAGTAAGAAGCAGatctgttcatcagttgctgggcacttgggtttttt-ccacgttttgctattgtgaatattgctgctgtgaacattcacatacaagtttttgtgtgatcagaagttttctgttctctt----------gggcacacacccaggtgtgattgaatcactgggtcatagagtaactctgtgttttacttttta-----ctttttgaaaaactaccag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47912539 223 + 51301725 ----CCATCGCCGGCTGAGTAAGAAGCAGATccgttcatcagttgatgggcacttgggttttTC-CCacattttgctattatgaatattgCTGCTGTGAACGTtcacatacaagtttttgtgtgatcATAAGTTTTCTGTTCTCTT----------GGGTACACACCCAGGGCTGATTGAATCACTGGGTCATAGAGTAActctgtgttttacttttta-----ctttttgaaaaactaccag i papAnu2.chr19 C 0 C 0 s canFam3.chr1 20070188 237 - 122678785 CTATCTCTCAGTGGGTGCATAAGAAATGAatccattcatccactgatggacattacattatctc-ctttttggggctactatgaataatgttgccatgaacatttatgtacacatttt--tatgaacatgcattttttaatttcttaatttggggggagcatatagctacaagtg---gaatagctgagtcctgtgataattttatgatatggtcataggatattcttttgaggaaatgctga i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 20853 8591 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=113444.000000 s hg38.chr19_GL949747v2_alt 664291 109 + 729520 act-tctttcttttttttct-------------------------tt--tttttttttttttgagacagagtctcattctgttgcccaggctggagtgcagtggcgcgatctcagctcactgcaacctccacctcct s panTro4.chr19 59930950 102 + 63644993 act-tgtttctttttttt----------------------------------ttttttttttgagacggagtctcgttctgttgcccaggctggagtgcagtggcgcgatctcagctcactgcaacctccacctcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56863498 91 + 60714840 act-ttt---------------------------------------------ttctttttttgagacgaagtctcattctgttgcccaggctggagtacagtggcgcaatctcagctcactgcaacctccacctcct i ponAbe2.chr19 C 0 I 9605 s rheMac3.chr19 60663735 131 + 64156825 actgtttttctttcttttcttttcttttttttctttttctt----tt--tttttttttttttgagacggagtctcgttctgttgcccaggctggagtgcaatggcgcgatctcagctcactgcaagctccgcctccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55804763 135 + 59248254 actgTttttctttcttttcttttcttttttttctttttctttttctt--ttcttttttttttgagacggagtctcgttctgttgcccaggctggagtgcaatggcgcgatctcagctcactgcaagctccgcctccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47912762 137 + 51301725 actgtttttctttcttttctttttttttttttctttttctttttctttgtttttttttttttgagacggagtctcgttctgttgcccaggctggagtgcagtggcgcgatctcagctcgctgcaacctccacctccc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20070425 0 - 122678785 C e calJac3.chr22_GL285922_random 20853 8591 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=267724.000000 s hg38.chr19_GL949747v2_alt 664400 205 + 729520 gggttcaagcgattctcctccctcagcctcccgagtagctgggattacaggcacctgccatcacgcctggccaacttttttttttgtactttagtagaggcggggtttcaccatgttggccaggatggtctcgatctcctgacctcgtgatccaccctccttggcctctcaaagtgctgggattacaggctgcgcctggccacag s panTro4.chr19 59931052 205 + 63644993 gggttcaagcgattctcctccctcagcctcccgagtagctgggattacaggcatctgccaccacgcctggccaacttttttttttgtactttagtagaggcggggtttcaccatgttggccaggatggtctcgatctcctgaccttgtgatccaccctcctcagcctctcaaagtgctgggattacaggctgcgcctggccacag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873194 204 + 60714840 gggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcacctgccaccacgcccggccaac-tctttttttgtactttagtagaggcggggtttcaccatgttggcccggatggtctcaatctcctgacctcatgatccaccctcctcggcctctcaaagtgctgggattacaggctgcgcctggccacag i ponAbe2.chr19 I 9605 C 0 s rheMac3.chr19 60663866 204 + 64156825 gggttcacgcgattctcctgcctcagcctcctgagtagctgggattacaggcgcccgccaccatgcccggccaac-tttttttttgtactttagtagagattgggtttcaccatgtcggccaggatggtctcgatctcctgaccttgtgatccaccctcctcagcctctcaaagtgctgggatgacaggctgcgcctggccacag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55804898 204 + 59248254 gggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcgcccgccaccatgcccggccaac-tttttttttgtactttagtagagattgggtttcaccatgtcggccaggatggtctcgatctcctgaccttgtgatccaccctcctcagcctctcaaagtgctgggatgacaggctgcgcctggccacag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47912899 204 + 51301725 gggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgcccgccaccatgcctggccaac-tttttttttgtactttagtagagattgggtttcaccatgtcggccaggatggtctcgatctcctgaccttgtgatccaccctcctcagcctctcaaagtgctgggattacaggctgcgCCTGGCCACAG i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20070425 0 - 122678785 C e calJac3.chr22_GL285922_random 20853 8591 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=174098.000000 s hg38.chr19_GL949747v2_alt 664605 121 + 729520 actgtttttcaaagcagctgcaccattttatattcccaccagcaatataagaaggttc------ttccaaatcctcaccaatacttcttgt------------------ccgtttgttttgttttaaaaatcatagtcatcctag s panTro4.chr19 59931257 121 + 63644993 actgtttttcaaagcagctgcaccattttatattcccaccagcaatacaagaaggttc------ttccaaatcctcaccaatacttcttgt------------------ccgtttgttttgttttaaaaatcatagtcatcctag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873398 120 + 60714840 actgtttttcaaagcagctgcaccattttatattcccaccagcaatacaagaaggttc------ttccaaat-ctcaccaatacttctcgt------------------ctgtttgttttgttttaataatcacagtcatcctag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664070 121 + 64156825 actgtttttcaaggcagctgcaccattttatattcccaccagcaatacaggaaagttc------ttccaaatcctcaccaatacttcctgt------------------ccgtttgttttattttaacaatcacagccatcctag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55805102 119 + 59248254 actgtttttcaaggcagctgcaccattttatattcccaccag--atacaggaaggttc------ttccaaatcctcaccaatacttcctgt------------------ccgtttgttttattttaacaatcacagccatcctag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47913103 121 + 51301725 ACTGTTTTTCAaggcagctgcaccattttatattcccaccagcaatacagGAAGGTTC------TTCCAAATCCTCACCAATACTTCTTGT------------------ccgtttgttttattttaataatcacaGCCATCCTAG i papAnu2.chr19 C 0 C 0 s canFam3.chr1 20070425 145 - 122678785 actgttttccacagcagcaacatgatgtttcattcccatcaacaatgtgtgggggttccaatttccccacatcctcaacaatacctgttgttgtacttaattattactattattattattattattattattattgccattctgg i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 20853 8591 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=127637.000000 s hg38.chr19_GL949747v2_alt 664726 78 + 729520 ttggcatggtgaattttatggtatgtgaattatatctcagtttgaataataagatgtggatccatgtcttcgtgagcc s panTro4.chr19 59931378 78 + 63644993 ttggcatggtgaattttatggtatgtgaattatatctcagtttgaataataagatgtggatccatgtcttcgtgagct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873518 78 + 60714840 ttggcatggtgaattttatggtatgtgaattagatctcaatttgaataatcagatgtggatccatgtcttcatgagct i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664191 78 + 64156825 ttggcatgGTCCATTTTATGGTATGTGGATTATATCTCAGTTTGAAGAAGAATAAGTGGATCCACATCTTCACGAGCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55805221 78 + 59248254 ttggcatgGTCCATTTTATGGTATGTGGATTATATCTCAGTTTGAAGAAGAATAAGTGGATCCACATCTTCACGAGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47913224 78 + 51301725 TTAGCATGGTACATTTTATGGTATGTGGATTATATCTCAATTTGAAGAAGAATAAGTGGATCCGCATCTTCATGAGCT i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 29444 78 + 138250 TCGGCATGGTAAATTTTATGGTATGTGAGTTATAACTGAATTTGAAGAAGACGACGTGGGCCAGCATTTTCATGAGCT i calJac3.chr22_GL285922_random I 8591 C 0 s canFam3.chr1 20070570 71 - 122678785 tgggtgtgatgaatttcatggtttGTGA--CATATCTAAATTTAAAAAATAAGTAgagg-----tgccttggtggttc i canFam3.chr1 C 0 I 70 e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=501.000000 s hg38.chr19_GL949747v2_alt 664804 1 + 729520 t s panTro4.chr19 59931456 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873596 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664269 1 + 64156825 C i rheMac3.chr19 C 0 I 3 s macFas5.chr19 55805299 1 + 59248254 C i macFas5.chr19 C 0 I 334 s papAnu2.chr19 47913302 1 + 51301725 C i papAnu2.chr19 C 0 I 347 s calJac3.chr22_GL285922_random 29522 1 + 138250 C i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20070641 70 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=51255.000000 s hg38.chr19_GL949747v2_alt 664805 32 + 729520 aGAGGAAGAATGAGCTCGTGTTAGCCTCAGAA s panTro4.chr19 59931457 32 + 63644993 aGAGGAAGAATGAGCTCGTGTTAGCCTCAGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873597 32 + 60714840 aCAGGAAGAATGAGCTCGCGTTAGCCTCAGAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664273 32 + 64156825 TTAGGAAGAATGAGCTCGTGTTAGCCTCAGAA i rheMac3.chr19 I 3 I 354 s macFas5.chr19 55805634 32 + 59248254 aaaaaaagaaTGAGCTTGTGTTAGCCTCAGAA i macFas5.chr19 I 334 C 0 s papAnu2.chr19 47913650 32 + 51301725 aaaaaaagaatgagcttgTGTTAGCCTCAGAA i papAnu2.chr19 I 347 C 0 s calJac3.chr22_GL285922_random 29523 32 + 138250 AGAGGAAAAATGAGCTCATATTAGCCTCTGAA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20070641 70 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=27271.000000 s hg38.chr19_GL949747v2_alt 664837 24 + 729520 CACGGGATCTCCACCTTCCAACTT s panTro4.chr19 59931489 24 + 63644993 CACGGGATCTCCACCTTCCAACTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873629 24 + 60714840 CACGGGATCGCCACCTTCCTACTT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55805666 24 + 59248254 CATGGGATCTCCACCTTCCTACTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47913682 24 + 51301725 CATGGGATCTCCACCTTCCTACTT i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 29555 24 + 138250 CACAGGATATCTACCTTCCTACTA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20070641 70 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T e rheMac3.chr19 60664305 354 + 64156825 I a score=30953.000000 s hg38.chr19_GL949747v2_alt 664861 84 + 729520 AGGCCAttttctttttttcttttt-----ttttttttttttgagacagagtcttactc-tgtcgtccaggctggagtgcagtggtgcaat s panTro4.chr19 59931513 89 + 63644993 AGGCCATTTTCtttttctctttttcttttttttttttttttgagacagagtcttactc-tgtcgtccaggctggagtgcagtggcgcaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873653 85 + 60714840 AGGCCAttttcttttttttttttt----tttttttttttttgagacagagtctcactc-tgtcgtccgggctgaagtgcagtggcgcgat i ponAbe2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 29579 69 + 138250 AGACCAtt---------------------ttttttttttttgagatggagtttcgctcttgttgcccaggctggagtgtaatggcacaat i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20070641 70 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T e papAnu2.chr19 47913706 0 + 51301725 C e macFas5.chr19 55805690 0 + 59248254 C e rheMac3.chr19 60664305 354 + 64156825 I a score=99251.000000 s hg38.chr19_GL949747v2_alt 664945 234 + 729520 ctcggctcactgcaagctctgcctcccgggttcacaccattatcctgcctcagcctcccgagtagctgggactacaggcacccgccaccacgcctggctaatttttttgtattttcagtagagatggggtttcaccgtgttagccaggatggtct---cgatctcctgaccttgtgatccacccgcctcagcctcccaaagtgctgggaatacaggcgtgagccaccgcgcccggcc s panTro4.chr19 59931602 234 + 63644993 ctcggctcactgcaagctccgcctcccgggttcacaccattgtcctgcctcagcctcccgagtagctggaactacaggcacccgccaccacgcctggctaatttttttgtattttcagtagagatggggtttcaccgtgttagccaggatggtct---tgatctcctgaccttgtgatccacccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873738 233 + 60714840 cttggctcactgcaagctccgcctcccgggttcatgccattctcctgcctcagcctcccgagtagctgggactacaggcacccgccaccacgcctggctaa-ttttttgtatttttagtggagatggagtttcaccgtgttggccaggatggtct---cgatttcctgacctcgtgatccaccctcctcggcctcccaaagtgctgggattacaggcatgagccaccgcacacagcc i ponAbe2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 29648 233 + 138250 ctcggctcactgcaacctctgccttctgggttcaggcaattctcctgcctcagcctcctgagtagctgggattacaggcgtgcaccaccatgcccagctaa-ttttttgtatttttagtagagacggggtttcaccatgttgaccagggtggtct---ggatctgttgacctcgtgatccacccgcctcggcctcccaaagtgctgggtttacaggcttgagccaccgcgcctggcc i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20070711 142 - 122678785 ccctgctcagtggggactctatctccc--------------------tctccatctccc-----tctgtgatctc-----------------tctggctct--------cattctcaa-agtgaatcagtatatctgtacaaGCTCAG-TGGTTTATGCCATCTTCTGAGTGTAAGAGGCTCC--------CCTCCTTA----------TTA------------------------- i canFam3.chr1 I 70 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T e papAnu2.chr19 47913706 0 + 51301725 C e macFas5.chr19 55805690 0 + 59248254 C e rheMac3.chr19 60664305 354 + 64156825 I a score=547849.000000 s hg38.chr19_GL949747v2_alt 665179 234 + 729520 AGGCCATTTTCTTAACCAGGGGCCTCC-------TGAGGCCACCAAAATA-TTCCTGAACTGCCTCAGCTGATAAATACGAAGCTCTTGT-TGCAGTGGGTACTATCCTGG-GAGTCTTTTTATGGTGGAACCAGCTTGGAAAAAACTAGTTTATGCTCAGCTCTCGGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTATTTCTCTTCGTGTGAGATGCATTAATAAACCTT-----TTTT s panTro4.chr19 59931836 239 + 63644993 AGGCCATTTTCTTAACCAGGGGCCTCC-------TGAGGCCACCAAAATA-TTCCTGAACTGCCTCAGCTGATAAATACGAAGCTCTTGT-TGCAGTGGGTACTATCCTGG-GAGTCTTTTTATGGTGGAAGCAGCTTGGCAAAAACTAGTTTATGCTCAGCTCTCGGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTATTTCTCTTCGTGTGAGATGCATTAATAAACCTTGTTTTTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873971 237 + 60714840 AGGCCATTTTCTTAACCAGGGGCCTCC-------TGTGGCCACCAAAATATTTCCTGAACTGCCTCAGCTGATAAATATGAAGCTCTTGT-GGTGGTGGGTACTATCCTGG-GAGTCTTTTTATGGTGGAACCAGCTTGGCAACAACTACTTTATGCTCAGCTCTCTGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTACTTCTCTTCCTGTGAGATGCATTAATAAACCTTGT---TTCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664659 237 + 64156825 AGGCCGTTTTCTTAACCAGGGACCTCC-------TGTGGCCACCAAAATGTTTCCTGAACTGCCTCGGCTGATAAATATGAAGCTCTTGT-GGTGGTGGGTACCATCCTGG-GAGTCTTTTTATGGTGGACCTAGCTCGGCAAAACCTAGTTTATGCTCAGCTCTCTGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTACTTCTCTTCCTGTGAGATGCATTAATAAGCCTTGT---TTCT i rheMac3.chr19 I 354 C 0 s macFas5.chr19 55805690 237 + 59248254 AGGCCATTTTCTTAACCAGGGACCTCC-------TGTGGCCACCAAAATGTTTCCTGAACTGCCTCGGCTGATAAATATGAAGCTCTTGT-GGTGGTGGGTACCATCCTGG-GAGTCTTTTTATGGTGGACCTAGCTCGGCAAAACCTAGTTTATGCTCAGCTCTCTGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTACTTCTCTTCCTGTGAGATGCATTAATAAGCCttgt---ttct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47913706 229 + 51301725 AGGCCATTTTCTTAACCAGGGACCTCC-------TGTGGCCACCAAAATGTTTCCTGAACTGCCTCGGCTGATAAATATGAAGCTCTT----GTGGTGGGTACCATCCTGG-GAGTCTTTTTATGGTGGACCTAGCTCTGCAAAACCTAGTTTATGCTCAGCTCTCTGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTA-----CTTCCTGTGAGATGCATTAATaagccttgt---ttct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47611992 219 + 50890351 AGGCCATTTTCTTAACCAGGGACCTCC-------CGTGGCCACCAAAATGTTTCCTGAACTGCCTCGGCTGATAAATATGAAGCTCTTGT-GGTGGTGGGTACCATCCTGG-GAGTCTGTTTACGGTGGACC-------------CCTAGTTTATGCTCAGCTCTCTGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTA-----CTTCCTGTGAGATGCATTAATAAGCCTTGT---TTCT i chlSab2.chr6 T 5744 C 0 s calJac3.chr22_GL285922_random 29881 206 + 138250 AGACCATTTCCTTAACCAGGGAGCTTC-------TGTAGC-----------TTC-----------------ATACATATTAAGCCCTTGT-TGCAGTGGGTACCATTTTGG-GAGTCTTTTTATGGTGGAACCAGCTCAGCAAAACCTAATTTATGCTCAGCTGTC--TGGCATAATGATAGTGTGGGTATTATTTGGTCTTTGTTCCTTCTCTTCCTGTGAGATGCATTAATAAGCCTTGT---TTt- i calJac3.chr22_GL285922_random C 0 I 2030 s canFam3.chr1 20070853 233 - 122678785 AGGCCATTTTCTTATCCAGGGACTGCCCTGGTTACATGGACACCAAAACATTTCCTAAAAACCTTCAACCTATAAATATGTAGCTCCTATCAAGAGTGGGGACTATCTTGGTGGGCCTTTTTATGGTAAAACCAGCTCATCAAAGCCTAC-----------CTATCTGTGGTATAATAAGAGCTTGCATATTATTTGTTCTCTGTTATTTCTCTTCCTGTAAGTCTCATTTATAAATTTTGT---TT-- i canFam3.chr1 C 0 I 8353 e nomLeu3.chr10 103362684 100 - 106955855 I a score=6248.000000 s hg38.chr19_GL949747v2_alt 665413 8 + 729520 Tttttttt s panTro4.chr19 59932075 8 + 63644993 Tttttttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56874208 8 + 60714840 tttttttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664896 6 + 64156825 TTTTTt-- i rheMac3.chr19 C 0 I 6 s macFas5.chr19 55805927 6 + 59248254 tttttt-- i macFas5.chr19 C 0 I 953 s papAnu2.chr19 47913935 6 + 51301725 tttttt-- i papAnu2.chr19 C 0 I 6 s chlSab2.chr6 47612211 6 + 50890351 TTtttt-- i chlSab2.chr6 C 0 I 3 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=72712.000000 s hg38.chr19_GL949747v2_alt 665421 67 + 729520 caattaaaatt-----tcagttccagaatccatgtgcaggacgtgcaggtttgttacataggtaaacgtgtg s panTro4.chr19 59932083 67 + 63644993 caattaaaatt-----tcagttccagaatccatgtgcaggacgtgcaggtttgttacataggtaaacgtgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56874216 67 + 60714840 aaattaaaatt-----taagttccagaatccatgtgcaggatgtgcaggtttgttacacaggtaaacgtgtg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664908 69 + 64156825 taattaaaattta---taagttacaggatccatgtgcaggaggtgcaggtttgttacacaggtaaacgtgtg i rheMac3.chr19 I 6 I 893 s papAnu2.chr19 47913947 69 + 51301725 taattaaaatttattttaagttccaggatccatgtgcaggaggtgcaggtttgttacacaggtaaacgt--- i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 47612220 69 + 50890351 aaattaaaatgtattttaagttccaggatccatgtgcgggaggtgcaggtttgttacacaggtaaacgt--- i chlSab2.chr6 I 3 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e macFas5.chr19 55805933 953 + 59248254 I a score=445864.000000 s hg38.chr19_GL949747v2_alt 665488 544 + 729520 ccatggtggtttgctgcacccatcaacccatcacctaggtattaagccccacacgcatcagctatttatcctgatcctctccctcccccaatt-ccccctacaggccccagtgtgtggtgttcccctccctgtgtccatgtgatctcattgttcagctgccacttacaagtgagaacatgcagtg-tttggttttcagttcctgtgttagtttgctgaggataatgttttccagctccatccatgtccctgcaaaggacatgatctcattcctttttatggctgcatagtattccatggtgtatatgtactgtatttgctttatcctttctatcattgatgggcatttgggttgattccttgtctttgctattgtgaatagtgctgcaatgaacatatgtgtgcatg-tatctttataatacaatgatttatattcctttgggtatataaccagtaatgggattgctgggtcaaatggtatttctggccaggcgcagtggctcacacatgtaatcccagcactttgggaggccgaggtgggcagatc s panTro4.chr19 59932150 545 + 63644993 ccatggtggtttgctgcacccatcaacccatcacctaggtattaaaccccacacgcatcagctatttatcctgatcctctccctcccccagtt-ccccctacaggccccagtgtgtggtgttcccctccctgtgtccatgtgatctcattgttcagctgccacttacaagtgagaacatgcagtggtttgcttttcagttcctgtgttagtttgctgaggataatgttttccagctccatccatgtccctgcaaaggacatgatctcattcctttttatggctgcatagtattccatggtgtatatgtaccgtattttctttatcctttctatcattgatgggcatttgggttgattccttgtctttgctattgtgaatagtgctgcaatgaacatatgtgtgcatg-tatctttataatacaatgatttatattcctttgggtatataaccagtaatgggattgctgggtcaaatggtatttctggccaggcacagtggctcacacctgtaatcccagcactttgggaggccgaggtgggcagatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56874283 541 + 60714840 ccatggtggtttgctgcacccatcaacccatcacccaggtatcaagcgccacacacatcagctgtttatcctgatcctctccctcccccag---cccccgacaggccccggggtgt-gtgctcccctccctgtgtccacgtgttctcattgttcagctcccacttacaagtgagaacatgcagtg-tttgctttcctgttcttgcgttagtttgctgaggataatggcttccagctccatccatgtccctgcaaaggacgtgatctcattcctttttatggctgcatagtattccatggtgtacatgtaccgtattttctttatccagtctatcattgatgggcatttgggttgattccttgtttttgctattgtgaatagtgctgcaatgaacatatgtgtgcatg-tatctttataatacaatgatttatattcctttgggtatataaccagtaatgggattgctgggtcaaatgatatttctggccaggcacagtggctcacacctgtaatcccagcactttgggaggccgaggtgggcagatc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47914016 540 + 51301725 -----gtggtttgctgcacccatcaa-ccatcacctaggtattaaaccccaCACGcgttagctatttttcctgatcctctccctcccctgactcccccctacaggccccagtgtgtgttgttcccctccctgtgtccatgtgttctcattgttcagctcccacttacaagtgagaaagtgtggta-tttgcttttctgttcttgcgttagtttgctgaggataatggcttccagctccatccatgtccctgcaaaggacatgacctcattcctttttatggctgcatagtattccatgctgtgtatgtaccatattttctttatgcagtctgtcattgatgggcatttgggttgattctatgtctttgctattgtgaatagtgctgcaatgaacatatgtgtgcatgttatctttataatacaatgatttatatgcttttggatatataaccagtaatgggattgctgggtcaaatggtatttctgaccgggtgcagtggctcacacctgtaatcccagcactctgggaggccgaggtgggcagatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47612289 539 + 50890351 -----gtggtttgctgcacccatcaa-ccatcacctaggtattaaaccccacacgcgttagctctttttcctgatcctctccctcccctgact-ccccctacaggccccagtgtgtgttgttcccctccctatgtccacgtgttctcattgttcagctcccacttacaagtgagaaagtgtggtg-tttgcttttctgttcttgcgttagtttgctgaggataatggcttccagctccattcatgtccctgcaaaggacatgacctcattcctttttagggctgcatagtattccatgctgtgtatgtactatattttctttatgcagcctgtcattgatgggcatttgggtagattccatgtctttgctattgtgaatagtgctgcaatgaacatatgtgtgcgtgttatctttataatacaatgatttatatgcctttggatatataaccagtaatgggattgctgggtcaaatggtatttctgACGgggtgcagtggctctcacctgtaatcccagcactctgggaggccgaggtgggcagatc i chlSab2.chr6 C 0 I 5309 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=11142.000000 s hg38.chr19_GL949747v2_alt 666032 22 + 729520 acctgaggtcaggagctcaaga s panTro4.chr19 59932695 22 + 63644993 acctgaggtcaggagctcaaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56874824 22 + 60714840 acctgaggtcaggagcttgaga i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47914556 22 + 51301725 gcctgaggtcaggagttcaaga i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=91206.000000 s hg38.chr19_GL949747v2_alt 666054 371 + 729520 ccaccctggccaacatggtgaaactcccgtctctagcaaaaatccaaaaattagccaggcgttgtggcatgcacctgcagtcccagctactcgggaggctgaggcaggagaatcacttgaaccctggaggcagaggctgcagtgagccgagatcatgcccctgcaatccagcctgggtgacagagtgagactctgttt---aaaaaaaaaaaaaaaaaaaaaaGGTGGCcctgg-tgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggtggatcacctgaggtcagaagtttgagaccagcatgaccaacaaggtaaaaccccatctctactaaaagaaaaaaaaaaaaaaa---agccagg s panTro4.chr19 59932717 369 + 63644993 ccaccctggccaacatggtgaaactcccatctctatcaaaaatacaaaaattagccaggcgttgtggcatgcacctgcagtcccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggcagaggctgcagtgagccgagatcatgcccctgcaatccagcctgggtgacagagtgagactctgttt---ttaaaaaaaaaaaaaaaaaaaaGGTggcccggggtgcggtggctcacgcctgtaatcctagcactttgggaggccgaggcgggtggatcacctgaggtcagaagtttgagaccagcatgaccaacaaggtaaaaccccatctctactaaaagaaa---aaaaaaaaa---aaccaag i panTro4.chr19 C 0 I 78 s ponAbe2.chr19 56874846 377 + 60714840 gcacgctggccaacatggtgaaactcccctctctatcaaaaatacaaaaattagccaggcgtggtggcatgcacctgcagtcccagctagtcgggaggctgaggcaggaaaatcgcttgaaccctggaggcagaggctgcagtgggtcgagatcataccactgcaatccagcctgggtgacacagtgagactctgtttggaaaaaaaaaaaaaaaaaaaaaaaaGCTggccggg-tgcggtggctcacgcctgtaatcccagcactttgagaggccaaggcgggtggatcacctgaggtcagaagtttgaaaccagcgtgaccaacaaggtgaaaccccatctctattaaaaaaaaaaaaaaaaaaaaattagccagg i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=6888.000000 s hg38.chr19_GL949747v2_alt 666425 77 + 729520 catggtggcaggcgcctgtagtcccagttacttaggaggctgagacaggataattgcttgaacctgggaggtggagg s ponAbe2.chr19 56875223 77 + 60714840 catggtggtaggtgcctgtggtcccagctacttaggaggctgagacaggataattgcttgaacctgggaggtggagg i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I e panTro4.chr19 59933086 78 + 63644993 I a score=47222.000000 s hg38.chr19_GL949747v2_alt 666502 201 + 729520 ttgcagtgagccgagatcgcaccactgcactccagcatgggctattgagcaatactacatctcaaaaaaaaaaaaaa--------ggaaaaaggatttctggttctgggtctttgaggaatcaccacactgtcttccacaatgaactaatttacattcccaacagtgtaaaagcattcctatttctccacagcctcgccagcacctgtt s panTro4.chr19 59933164 209 + 63644993 tccccgtgacccaagattgccccccccccctccagcatggggtattgagcaagactatttttcaaaaaaaaaaaaaaaaaaaaaaggaaaaaggatttctggttttgggtctttgaggaatcaccacactgtcttccacaatgaactaatttacattcccaacagtgtaaaagcattcctatttctccacagcctcgccagcacctgtt i panTro4.chr19 I 78 C 0 s ponAbe2.chr19 56875300 202 + 60714840 ttgcagtgagccaagatcgcaccactgcactccagcatgggctattgagcaagactccatctaaaaaaaaaaagaaa-------caaaaaaaggatttctggttctgggtctttgaggaatcaccacactgtcttccacaatgaactaatttacattcccaacagtgtaaaagcattcctatttctccacagcctcaccagcatctgtt i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=26089.000000 s hg38.chr19_GL949747v2_alt 666703 317 + 729520 gtttcttgacttttgttggttttttttttttttttttgagatggagtcttgctctgtcgcccaggctggagtgcagtggcacaatcttggctcactgcaacctccgcctcccgggttcacgccattctcctgcctcagcctcccgaatagctgggactacaggcgcccgccaccacgcccggctaattttttgtatttttaatagagacggggtttcaccgtgttagccaggatggtctcgatctcctgaccttgtgatctgcctgcctcggcctcccaaagtgctgggattaccggcgtgagccaccgtgcccggc s panTro4.chr19 59933373 313 + 63644993 gttttttgacttttttt---tttttttttttttttttgagatggagtctcactctgtcgcccaggctggagtgcagtggcgcaatcttggctcaccgcaacctctgcctcctgggttcacgccattctcctgcctcagcatcccgagtagctggtactagaagtgcccgccaccacgtccggctaattttttgtatttttag-agagacggggtttcaccatgttagccaggatggtctcgatctcctgaccttgtgatccgcccgcctcggcctcccaaagtgctgggattaccggcgtgagccaccacgcccggc i panTro4.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e ponAbe2.chr19 56875502 0 + 60714840 C e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=223394.000000 s hg38.chr19_GL949747v2_alt 667020 872 + 729520 gtttcttgactttttaataatcgccattttga-ctggtgtgagatggtgtctaaatgtggttttgatttgcatttctctaatgattggtgatgttgagcttttttttgtatgtttactggctgcataaacgtcttcttttgagaagtgactgttcatgtcctttacccactttttaatggttttttttttcttgtaaatttgtttaacttccttgtagattctggatattagacttttgtga-attgatagattgcaaacattttctcccattctgtaggttgtctgttcactctgatgatactttcttttgctgagcagaagctctttagtttagttagatcccatttgtcagtttttgcttttgttacaattgcttttgacgtttttgtcatgaaatctttgcccatgcctgtgtcctgaatggtattacctagattttcttctagggtttttatagttttcgggttttgcatccaagtctttcatccatcttgagttaatttttgtacaaggtgtaaggaacgggtccagtttctattttctgcatatggctagccaattctcccagcaccatttattaacccacagccaatttcatactaaatgggcatttcccttgaaaaccagcacaagacaaggatgccctctttcaccactcctattcaacatagtattggaagttctggccaggataatcaggcaagagaaagaaataaaggatactcaaataggaagagaggaaatcaaactatctctgtttgcagatgacatgatcctatatctagaaaaccccatcatctcagcccaaaagtttcttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaat s panTro4.chr19 59933686 871 + 63644993 gtttcttgactttttaataatcgccattttgaactggtgtgagatggtgtctcaatgtggttttgatttgcgtttctctaatgattggtgatgttgagcttttttcggtatgtttactggccgcatgaacgtcttcttttgagaagtgactgttcatgtcgtttacccactattttatggttttttttttcttgtaaatttgtttaacttccttgtagattctggatattagacttttgtga-attgatagattgcaaaaattttctcccattctgtaggttgtctgttcactctgatgatagtttcttttgctgagcagaagctctttggtttagttagatcccatttgtcagtgtttgcttttgttacaattgcttttgacatttttgtcatgaactctttgcctgtgcctgtgtcctgaatggtattacctagattttcttctagagtttttatagttt-cgggttttgcatctaagtctttcatccatcttgagttaatttttgtacaaggtgtaaggaaagggtccagtttctattttctgcatatggctagccaattctcccagcaccatttattaacccacagccaatttcatactaaatgggcatttcccttgaaaaccagcacaagacaaggatgccctctttcaccactcctattcaacagagtattagaagttctggccaggataatcag-caagagaaagaaataaaggatactcaaataggaagagaggaaatcaaactatctctgtttgcagatgacatgatcctatatctagaaaaccccatcatctcagcccaaaagtttcttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56875502 863 + 60714840 gtttcttgactttttaataatcgccattttga-ctggtgtgagatggtgtctcaatgtggttttgatttgcatttctctaatgattggtgatgttcagctttttttcatatgtttactagccacgtaaacatcttcttttgagaagtgatcgttcatgtcctttgcccactttttaa-----ttttttttcttataaatttgtttaacttccttgtagattctgaatattagacttttgtgagattgatagattgcaaaaattttctcccattctgtaggttgtctgttcactctgatgatagtttcttttgctgagcagaagctctttagtttatttagatcccatttgtcagtttttgcttttgttacaattgcttttgacatttttgtcatgaaatctttgcctgtgcctatgtcctgaatggtattacctagattttcttctagagtttttatagttt-tgggttttgcatttaagtctttaatccatcttgagttaatttttgtataaggtgtaaggaaagggtccagtttctattttctgcacatggctagccaattctcccagcacc----attaacccacagctaatttcatactaaataggcatttcctttgaaaaccaacacaagacaaggatgccctctttcaccactcctattcaacatagtattggaagttctggccagaataatcaggcaagagaaagaaataaaggatattcaaataggaagagaggaaatcaaactatctgtctttgcagatgacatgatcctatatctagaaaaccctatcatctcagcccaaaagtttcttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaat i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=475729.000000 s hg38.chr19_GL949747v2_alt 667892 991 + 729520 cacaagcattcctatacaccaacaatagacaggcagagagccaaatcatgaaggaactcccattcacaattgctacaaagagaataaaatacctaggaatacagctaacaaggaaagtgaaggacatcttcaaggagaactacaattcactgctcaagaaaatcagagcggacacaaacaaatggaaaaacattccatgctcatggataggatgaatcaatatcgtgaaaatggccatactgcccaaagtaatttatagattcattgctattcccattgaactatcattgacattcctcacacaattag--aaaaaacta---taaaattcatatggaaccaaaaaagggcccatatagccaagacaatactaagcaaaaagaacaaagctggaggcctcaggct--cagacttcagactatattacaaggtgatagtaaccaaaacagcatggtactggtacaaaaacagacacatagaccaatggaacagaatagagatctcagaaataagaccacacatctacaaccatctgatcttcaacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataCACCTTGTTTTGATTTTGATTTCAACACAGCGtgt--ggtatttgcatgccatgtgatacagtttgaatatgtgttcccaccaaatctcatactggattatga-tccccaatgttggaggtgggggcctggtgggaggtgtttggatcataggggtggatccctc-attgcttggtgctttccttgcaatagtaagtgaattctcacaagatctggctattgcaaagtgtggcatgtcccccagtcccaactctctctctctcttgctcctgctcccaccacatgagacagctaccccctctttgccttctgccatgactgtaagcttcctgaggcctccccaaaagcagaagccagccttctgcttcctatacggccttcagaaccatgaaccaattaaac------ctcttttctt s panTro4.chr19 59934557 988 + 63644993 cacaagcattcctatacaccaacaatagacaagcagagagccaaatcatgaaggaactcccattcacaattgctacaaagagaataaaatacctaggaatacagctaacaaggaaagtgaaggacatcttcaaggagaactacaattcactgctcaagaaaatcagagcggacacaaacaaatggaaaaacattccatgctcatggataggatgaatcaatatcgtgaaaatggccatactgcccaaagtaatttatagattcattgctattcccattgaactatcattgacattcctcacacaattag--aaaaaactactttaaaattcatatggaaccaaaaaagggcccatatagccaagacaatactaagcaaaaagaagaaagctggaggcctcaggct--cagacttcagactatactacaaggtgacagtaaccaaaacagcatggtactggtacaaaaacagacacatagaccaatggaacagaatagagatctcagaaataagaccacacatctacaaccatctgatcttcaacaaacctgacaaaaacaaacaatggggaaaggattccctatttaataCACCTTGTTTTGATTTTGATTTCAACACAGCGtgt--ggtatgtgcatgccatgtgatacagtttgaatatgtgttcccaccaaatctcatactggattatga-tccccaatgttggaggtgggggcctggtggggggtgtttggatcataggggtggatccctc-attgcttggtgctttccttgcaatagtaagtgaattctcacaagatctggctattgcaaagtgtggcatgtcccccagtcccaactctctctctctcttgctcct------accacgtgagacagctaccccctctttgccttctgccatgactgtaagcttcttgaggcctccccaaaagcagaagccagccttctgcttcctatacggccttcagaaccatgaaccaattaagc------ctcttttctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56876365 991 + 60714840 cacaagcattcctatacaccaacaatagacaagcagagagccaaatcaagaaggaactcccattcacaattgctacaaacagaataaaatacctaggaatacagctaacaaggaaagtgaaggacatcttcaaggagaactacaattcactgctcaagaaaatcagagcagacacaaacaaatggaaaaacattccatgctcatggataggacgaatcaatatcatgaaaatggccatactgcccaaactaatttatagatttgttgctattcccattgaactatcactgacatttctcacagaattag--aaaaaactactttaaaattcatatggaaccaaaaaagggcccatatagccaagacaatcctaagcaaaaagaacaaagctggaggcatcaggct--cagacttcaaactatactacaaggtgacagtaaccaaaacagcatggtactggtacaaaaacagacac--agaccaatggaacagaatagagatctcagaaataagaccacacacctacaaccatctaatcttcaacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataCACCTTGTTTTGATTTTGATTTCAATACAGTGTGT--GGTATGAGCATGCCATGtgatacagtttgaatatacgttcccaccaaatctcatactggattatga-tccccagtgttggaggtgggggccgggtgggaggtgtttggatcataggggtggatccctc-attgcttggtgctttctttgcaatggtaagtgaattctcacaagatctggctattgcaaagtgtggcacgtcccccagtcccaactctctctctctcttgctcctgctcccaccacgtgagacagctacccaccctttgccttctgccatgactgtaagcttcctgaggcctccccgaaaccagaagccagccttctg-ttcctatacagccttcagaaccgtgaaccaattaaac------ctcttttctt i ponAbe2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 32117 977 + 138250 cacaagcatttctatacactaacagtagacaagcagagagccaaatcatgaaggaactcccattcacaattgctacaaaaagaataaaatacctaggaatacagctaataagtgaaacggaggacatcttcaagg------------------------aaatcagagaggatacaaacaaatggaaaaacattccac-ttcatggataggaagaatcaatattgtgaaaatggccatactgcccaaagtaatttatagattaattgttagtcccattgaactatgattgacattcttcacagaattagaaaaaaaactactttaaaattcatatggaaccaaaaaaggacccatatagccaagacaatcctaagcaaaaagaacaaagctggaagcatcaggctgccagacttcaaactatactacgaggtgacagtaaccaaaacagaatggtactgctac-aaaacagacacatagaccaatggaacagaatagaaatctcagaagtaagaccacacatttacaaccatctgatctttgacaaacctgacaaaaacaagcaatggggaaagtattccctacttaataaGCCTTGTTTTGACTTTGATTTAAACTCAGTGTGTTAGGTATGTGCATGCCATGTGat--agtttgaatatacatgcccgccaaaccccatattggattatgaccccccactgttggagat-ggggcctggtgggaggtatttgaatcatgggggtggatccctcaattgcttggtgctgtcctcacaatagtgagtgaattctcacaacatgtgactattgcaaagtgtggcacatcctccagtcccaa--ttttctctctcttgctccttctcccagcatgtgagacacctgctccctcttcaccttctgccatgattgtaagcttcctgaggcctccccaaaagcagatgccagccttctgcttcctatacagccttcagaaccatgaaccaattaaacacctctttcttttctt i calJac3.chr22_GL285922_random I 2030 I 593 e canFam3.chr1 20071086 8353 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=149709.000000 s hg38.chr19_GL949747v2_alt 668883 548 + 729520 atcaatgatccagtctcagatatttatagcagcacaaaatcggcctaatatagcatgaaatattgctcagcaatcaaaaggaacacatcattgatacatacagcagcttggatgggcctcaggggcattgcactgagtgacaaaaggatatctcaaacggttgcatactggatgatcccatttacatcagattctagaaatggaagattatagagatggagaacaaattaatggataccaggagttagggatggcaagggaaggagaagggtgtaggtgtgaatataaaagggtagcccaagggaggcccttgtgagacggaagagttctgtacagtgactgcggtgatggtgacgcgaatctacaactgtgacaaattggcatagaactagacacCTACTttatgccaatgtcaaattcctggtttttatgttgtactctaattacgtaagatgtaaccattagaggaaactggaaaaagagcacatgggattcttctgttctatcattgtagacttcctgtgactctagaaccatttcaaaagaga s panTro4.chr19 59935545 548 + 63644993 atcaatgatccagtctcaggtatttatagcagcacaaaatcggcctaatatagcatgaaatattgctcagcaatcaaaaggaacacatcattgatacatacagcagcttggatgggcctcaggggcattgcactgagtgacaaaaggatatctcaaacggttgcatactggatgatcccatttacatcagattctagaaatggaagattatagagatggagaacaaattaatggataccaggagttagggatggcaagggaaggagaagggtgtgggtgtgaatataaaagggtagcccaagggaggcccttgtgagacggaagagttctgtacagtgaatgcggtgatggtgacacaaatctacaactgtgacaaattggcatagaactagacacCTACTttatgccaatgtcaaattcctggtttttatgttgtactctaattatgtaagatgtaactattaggggaaactgaaaaaagagcacatgggattcttctgttctatcattgtagacttcctgtgactctagaaccatttcaaaagaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56877356 548 + 60714840 atcaataatccagtctcaggtatttatagcagcacaaaaccagcctaatacaGcatgaaatattgctcagcaatcaaaaggaacacatcattgatacatacagcagcttggatgtgcctcaggggcattgcactgagtgacaaaagggtatctcaaacggttgcatactggatgatcccatttacatcagattctagaaatggaagattatagagatggagaaccaattaatggataccaggagttagggatggcaagggaaggagaagggtgtgggtgtgaatataaaagggtagcccaagggaggcccttgtgagacggaagagttctgtacagtgaatgcagtgatggtgacacgaatctacaactgtgacaaattggcacagaactagacacCTACTttatgccaatgtcaaattcctggtttttatgttgtactgtaattatgtaagatgtaaccattaggggaaactggaaaaagagcagatgggattcttctgttctatcattgtagacttcctgtgactctagaaccatttcaaaagaga i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 33094 593 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=11514.000000 s hg38.chr19_GL949747v2_alt 669431 102 + 729520 aagttcaaaaaTTCAGTCAGAAGCACACGCACACATATGCACGCATGCACACACACA---------CATATGCACGCATGCAC------------ACACATATGCA-----------------------------------CGCACACA------------CACATATGC s panTro4.chr19 59936093 170 + 63644993 aagttcaaaaaTTCAGTCAGAAgcacacgcgcacacatgcacgcatgcacacacacatgcatgccacacatgcacacatgcacgcacacacacgcacacatatgcatgccgcacacacgcacacatacgcacgcgcgcacacgcacacatgcacgcatgcacacatatgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56877904 49 + 60714840 aagttcaaaaaTCCAGTCAGAAGcacacgc-----------------------------------------------------------------acacatatgcg-----------------------------------tgcacaca--------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103362784 50 - 106955855 AAGTTCAAAAATTCAGTCAGAAGCACACGC-----------------------------------------------------------------ACACATATGCA-----------------------------------CGCATGCA--------------------C i nomLeu3.chr10 I 100 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 33094 593 + 138250 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=120289.000000 s hg38.chr19_GL949747v2_alt 669533 216 + 729520 ACGCA---------------------CACACGCACA----TGCACGCACACACACATATGCACGCACACAGTATGTGACCATCTTCCATGTCCCTGCCCACTAGGCATAATAGCCCTCACTCTGCCCTCAACCCCGCAAATCT---CATCCTTATCAACCTCGGCTCTTTCCAGCATGTTTCTCCTGCCTTGG----TGCTTCACTCTGAGACACAGGGAATGTTAGACACGCCCAGCCTCCAGCCTA s panTro4.chr19 59936263 241 + 63644993 acgcatgcacacacacatgcatgccacacacgcacacatatgcacgcacacacgcacatgcacacacacaGTATGTGACCATCTTCCATGTCCCTGCCCACTAGGCATAATAGCCCCCACTCTGCCCTCAACCCCGCAAATCT---CATCCTTATCAACCTCGGCTCTTTCCAGCATGTTTCTCCTGCCTTGG----TGCTTCACTCTGAGACACAGGGAATGTTAGACACGCCCAGCCTCCAGCCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56877953 190 + 60714840 --------------------------cacacgcaca----tgcatg--------------------cacaGTGTGTGACCATCCTCCATGTCCCTGCCCACTGGGCATAACGGCCC-CATTCTGCCCTCAACCCCGCGAATCT---CATCCTTATCAACCTCGGCTCTTTCTAGCATGTTTCTCCTGCCTTGG----TGCTTCACTCTGAGACACAGGGAATGTTAGACATGCCCAGCCTCCAGCCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103362834 220 - 106955855 ACACA---------------------CACACGCACACATATGCACGCACACGCGTACATGCACGCACACAGTATGTGACCATCTTCCATGTCCTTGCCCACTGGGCATAGTAGCCCCCACTCTGCCCTCAACCCCGCAAATCT---CATCCTTATCAACCTCGGCTCTTTCCAGCATGTTTCTCCTGCCTTGG----TGCTTCACTCTGAGACACAGGGAATGTTAGACACACCCAGCCTCCAGCCTA i nomLeu3.chr10 C 0 I 302 s canFam3.chr1 20079439 195 - 122678785 -------------------------ACATGCACACACATGTGGGTGCATGCATACACATACACACATATAGTGTGC--------------------CTCATTTAGCATGACAGCCCCCATACTGCCCTCAGCCACACATGTCTGCACATTCTTGTCCAACTTGGCTCTTTTCAACATGCTTCTGTTCCTTTGGATTTGGGTCTACCCTGAG--ACAGGGAGTGTTAGAGATGCC------ACAGATCA i canFam3.chr1 I 8353 C 0 e calJac3.chr22_GL285922_random 33094 593 + 138250 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=303527.000000 s hg38.chr19_GL949747v2_alt 669749 530 + 729520 GCGTATGATATTCTTAAAGTGCAGGCCGTAGTCTGGTACACCGTATTCAGCTGAGATGTTTGTGAAAGTGGAGGGGATAACACGCCTCACACAAAACTTACCGcagtggttctcaaagcagcattctggagcca-tagcatcagcatcacctgggaacttactaggaatgaaaatgactgga-ttcaccccagacctactgaagcagaagccctgggggctcagaaatctattctttaagcctccaggtgattcttatgctcatggaagtttgagaaccgctgATCAATGCATTCAGTGACTCAGAAACAGAGTCCCGGACTCTACAggtttgttggttggttggttggttggttggttggttAGTTTGTT--------TGTTTTTGTCACCCATATTCAACCAGCTGGACTCCACAGTATAGCAAGCCACTCCGATTATTCTTCTGCATGTTATATGTGATAAACCATCCACCTAGAGTAGGATTG------------GGGGCAGCATCTTAACATCTAACTACTTAGGACACCCACCCTGTTTACAGGCA s panTro4.chr19 59936504 538 + 63644993 GCATATGATATTCTTAAAGTGCAGGCCGTAGTCTGGTACACCGTATTCAGCTGAGATGTTTGTGAAAGTGGAGGGGATAACACGCCTCACACAAAACTTACCGcagtggttctcaaagcagcatcctggagcca-tagcatcagcatcacctgggaacttactaggaatgaaaatgactgga-ttcaccccagacctactgaagcagaagccctgggggctcagaaatctgttctttaagcctccgggtgattcttatgctcatggaagtttgagaaccgctgATCAATGCAATCAGTGACTCAGAAACAGAGTCCCGGACTCTACAggtttgttggttagttggttggttggttggttggttagttagttagttagtttgttTTTGTCGCCCATATTCAACCAGCTGGACTCCACAGTATAGCAAGCCACTCCGATTATTCTTCTGCATGTTATATGTGATAAACCATCCACCTAGAGTAGGATTG------------GGGGCGGCATCTTAACATCTAACTACTTAGGACACCCACCCTGTTTACAGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56878143 513 + 60714840 GTGTATAATATTCTTAAAGTGCAGGCCGTAGTCCGGTACACCATATTCAGCTGACATGCTTTTGAAAGTGGAGGGGGTAGCACGCCTCACACAAAACTTACCAcagtggttctcaaagtggcatcctggag-ca-tagcatcagcatcacctgggaacttactaggaatgaaaatgactgga-tccaccccagacctactgaagcagaagccctgggggctcagaaatctgttctttaagcctccaggtgattcttatgctcatggaagtttgagaaccgctgATCAATGGAATCAGTGACTCAGAAACAGAGTCCCGGACTCTACA----------------ggttggttggttggttagttagtttgtt--------tgttTTTGTCACCCATATTCAACCAGCTGGACTCCACAGTATAGCAAGCCACTCCGATTATTCTTCTGCGTGTTATATGTGATAAACCATCCACCCAGAGTAGGATTG------------GGGGCAGCATCTTAACATCTAACTACTTAGGACACTCACCCTGTTTACAGGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103363356 516 - 106955855 GCGTATGATATTCTTAAAGTGCAGGCCATAGTCCAGTACACCGTATTCAGCTGAGATGCTTTTGAAAGTGGAGGGGACAGCACACCT-ACACAAAACTTACTGcagtggttctcaaagcggcatcctgg-gcca-tagcatcagcatcacctgggaacttactaggactgaaaatgactgga-ttcaccccagacctactgaagcagaagccctgggggctcagaaatctgttctttaagcctccaggtgattcttatgcccatggaaatttgagaactgctgATCAATGGAATCAGTGACTCAGAAACAGAGTCCCAGACTCTACAggtt------------ggttggttggttggttggttggttggtt--------ggttTTTGTCACCCACATTCAACCAGCTGGACTCCACAGTATAGCAAGCCACTCTGATTATTCTTCTGCGTGTTATATGTGATAAACCATCCACCTAGAGTAGGATTG------------GGGGTACCATCTTAACATCTAACTACTTAGGACACCCACCCTGTTTACAGGCA i nomLeu3.chr10 I 302 C 0 s canFam3.chr1 20079634 433 - 122678785 ATGCCCAAT-TTCTTAAGGCACAGGCTGGTATC-AACACA-TGAAATCAACTGAGGTGCCTTGAAGATGGGAGAAAATG--ATGGCTCACACAAAATTTTGTGcagtccttctcaaagtgacatccccagatcagcagcatcagtgtcacctggaaacttgttaaaaataaacatcactggaccccaccgcataccttctgaatcaggaattattgggatccagag--------tctcagcCACC------------CCCCCCCAATGTTTTTAGAGCCACTGGCCAATGGAATCAGAGACTCAAAAATAGAGTCCAGGAATCTACAATCT------------------------------------------------TAT------------------------------------------AAGTGACTCAGATTATTCTTTTCCACATTAGGCATTATAAACCATGCCCCTAAGGCTGGATAGAAATGGGGATGTAGGGCAGCATAGTAATGTCTAA-TATTT---ATACCCACCTTATTTACAGGCA i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 33094 593 + 138250 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=316862.000000 s hg38.chr19_GL949747v2_alt 670279 337 + 729520 GAAATAAAGGATTTTTAAAACAAAGCAAATCTGTGAAAGAACCAACTGAATTAAATCGAGAAGTCTAGGCAGAGAGGAGAGAG---AGAAGGGGTCCGTGTACCTCATACGCTGTGCACCAGAATGGACCCTGCAGAACCTACCTGCTACCGGGGAAGGTGGTTCTGTTGGTAACCG---GCTGGGGGTCACAGAGGTTCCTGGgaaatcagaaaatgagataaatctgtgctctgt-cgctgtgggtcctgaacaaataacgaaacat-ctccgtgactgagtttcctcaccggaaaaatgagcctaaagtagcttacatcactggactgttgtggatgttaaT s panTro4.chr19 59937042 337 + 63644993 GAAGTAAAGGATTTTTAAAACAAAGCAAATCTGTGAAAGAACCAACTGAATTAAATCGAGAAGTCTAGGCAGAGAGGAGAGAG---AGAAGGGGTCCGTGTACCTCCTACGCTGTGCACCAGAATGGACCCTGCAGAACCTACCTGCTACCGAGGAAGGTGGTTCTGTTGGTAACCG---ACTGGGGGTCACAGAGGATCCTGGgaaatcagaaaatgagataaatctgtgctctgt-cgctgtgggtcctgaacaaataaagaaacat-ctccgtgactgagtttcctgacctgaaaaatgagcctaaagtagcttacatcactggactgttgtggatgttaaT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56878656 340 + 60714840 GGAGTAAAGGATTTTTAAAACAAAGCAAATCTGTGAAAGAACCAAGTGAATTAAATCGAGAAGTCTAGGCAGAGAGGAGAAAGAGAAGAAGGGGTCCGTGTACCTCATACGCTGTGCACCAGAATGGACCCTGCAGAACTTACCTGCTACCGAGGAAGGTGGTTCTGTTGGTAACTG---GCTGGGGGTCACAGAGGTTCCTGGgaaatcagaaaatgagataaatctgtgctctat-cgctgtgggtcctgaacaaataatgaaacat-ctccgtgactgagtttcctcacctgaaaaatgagcctaaaatagcttacatcactggactgttgtggatgttaaT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103363872 313 - 106955855 G---------------------------ATTTGGGAAAGAACCAAGTGAATTAAATCGAGAAGTCTAGGCAGAGAGGAGAAAGAAAAGAAGGGGTCCATGTACCTCATATGCTGTGCACCAGAATGGACCCTGCAGAACTAACCTGCTACCGAGGAAGGTGGTTCTGTTGGTAACAG---GCTGGGGGTCACGGAGGTTCCTGGgaaatcagaaaatgagataaatccgtgctctgt-cgctgtgggtcctgaacaaataatgaaacat-ctccgtgactgagtttcctcacccgaaaaatgagcctaaagtatcttacatcactggactgttgtggatgttaat i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 33687 329 + 138250 GAAGTGAAGGGTTTTTAAAACAAAGCAAGTTTCTTAAAGAAACAAGTGAGTTAAATTGACAAACCTAGGCAGAAAGGCAAG-----AGAAGGAGTCCATGTGCCTCACACCCCGCGCACCAGAATGGATCTTGCAGAACTTACCTTTGGCAGACGAAGGTGGTTCCGTTGGTAACTGGCTGCTGGGGGTCACAGAGATTCCTGGGAAATCAGAAAATGAGAAAAA----TGCTCTGG-TCATGGGAGTCATCAACAAATACTAAaacat-ctctgtaccctagtttcctcacccgaaaaatgagtctaaagtagcttacatcaatggattgctgtgGATG----- i calJac3.chr22_GL285922_random I 593 C 0 s canFam3.chr1 20080067 339 - 122678785 GAAATCAGTGattttttaaataaattaaatttGTGAAAGAGACAAGTGAATTAAATTGAGAAATCTGGATAAAAGGGGAAAAGAA-AAAAAGGGTCTATGGGTCT-ATATCCCAGACACCAGGATGAACCCTCCAGAATTTACCTGTCACAGAGGAAGGTGGTTCTCTGGATAACAA---ACCGGGGGTCACAGAAGTCCCTGGGAAATCAGAAAAAAAGAGAATTCTGTGCTCTCTGGGCTATGGGTCCTGGGCAAATAATAAAGCACATTCTGCGACCCACTTACCGCACCTAAAAGATGAATCCAAAGAAGCTCACATCG-TAGACTGTCATGGGTGTTAAT i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=5765.000000 s hg38.chr19_GL949747v2_alt 670616 11 + 729520 AAGCATTTGAg- s panTro4.chr19 59937379 11 + 63644993 AAGCATTTGAg- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56878996 11 + 60714840 AAGCATTTGag- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364185 11 - 106955855 aagtATTTGAg- i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 34016 7 + 138250 -----TTTGAgg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080406 0 - 122678785 C e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=1898.000000 s hg38.chr19_GL949747v2_alt 670627 2 + 729520 ct s panTro4.chr19 59937390 2 + 63644993 ct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879007 2 + 60714840 ct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364196 2 - 106955855 ct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55806886 2 + 59248254 cc i macFas5.chr19 I 953 C 0 s calJac3.chr22_GL285922_random 34023 2 + 138250 cc i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080406 0 - 122678785 C e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e rheMac3.chr19 60664977 893 + 64156825 I a score=21990.000000 s hg38.chr19_GL949747v2_alt 670629 17 + 729520 gggtgcagtgcctcatg s panTro4.chr19 59937392 17 + 63644993 gggtgcagtgcctcatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879009 17 + 60714840 gggcgcagtgcctcatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364198 17 - 106955855 gggcacagtgcctcacg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60665870 17 + 64156825 gggtgcagtggctcaca i rheMac3.chr19 I 893 C 0 s macFas5.chr19 55806888 17 + 59248254 gggtgcagtggctcaca i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 34025 16 + 138250 aggcgcgg-ggctcaca i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080406 0 - 122678785 C e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C a score=115924.000000 s hg38.chr19_GL949747v2_alt 670646 56 + 729520 cctgtaatcccagcactttgggaggctgaggagggcagatcacttgaggtcaggag s panTro4.chr19 59937409 56 + 63644993 cctgtaatcccagcactttgggaggctgaggagggcagatcacttgaggtcaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879026 56 + 60714840 cctgtaatcccagcactttgggaggccgaggagggcagatcacttgaggtcaggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364215 54 - 106955855 cctgtaatcccagcactttgggaggctgaggcgggcagatca--tgaggtcaggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60665887 56 + 64156825 cctgtaatcccagcactctgggaggccgaggtgggcagatcgcctgaggtcaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55806905 56 + 59248254 cctgtaatcccagcactctgggaggccgaggtgggcagatcgcctgaggtcaggag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47618137 51 + 50890351 cctgtaatcccagcacttt-----gccgaggcgggcagatcacctgaggccaagag i chlSab2.chr6 I 5309 C 0 s calJac3.chr22_GL285922_random 34041 54 + 138250 cctgtaatcccagcgttttgggaggcagagccaggcaaatc--ccgaggtcaggag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080406 0 - 122678785 C e papAnu2.chr19 47914578 0 + 51301725 C a score=9267.000000 s hg38.chr19_GL949747v2_alt 670702 7 + 729520 ttcaagc s panTro4.chr19 59937465 7 + 63644993 ttcaagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879082 7 + 60714840 ttcaagc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60665943 7 + 64156825 ttcaagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55806961 7 + 59248254 ttcaaga i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47618188 7 + 50890351 ttcaaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 34095 7 + 138250 ttggaga i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080406 0 - 122678785 C e nomLeu3.chr10 103364269 0 - 106955855 C e papAnu2.chr19 47914578 0 + 51301725 C a score=996423.000000 s hg38.chr19_GL949747v2_alt 670709 500 + 729520 ccagcctggccagtatggtgaaaccccgtctccactaaaaatacaaaaattagccaggcgtggtggtgtgcacctgtaatcccagctgctcgggaggctgaggcaggagaatcacttgaacctaggaggcagaggttgcagtgatctgagatcgcaccactgcactccagcctgggtgacgcagtaagactccatctg-----------------------------------------------------------------aaaaaaaaaGGCTTA---------------------gccaggcgtggtggctcacacctgtaatcccagcactttgagaggccgaggcaggcagatcacctgaggtcaagagttcaagaccagcctggccaacatggtgaaaccctgtctctacgaaaaatacaaaaattagctgggcatgatggcaggtgcctgtaatcccatctactca--------------------------------------ggaggctgaggcaggagaatcgcttaaacccaggaggtggaggttgcagtgaactgagatcactccactgcactccagcctgggtgacaaagtgagac----tccccccaaaaaaa s panTro4.chr19 59937472 501 + 63644993 ccagcctggccagtatggtgaaaccccgtctccactaaaaatacaaaaattagccaggtgtggtggtgcgcacctgtaatcccagctgctcgggaggctgaggcaggagaatcacttgaacctaggaggcagaggttgcagtgatctgagatcacaccactgcactccagcctgggtgacgcagtaagactccatctga----------------------------------------------------------------aaaaaaaaaGGCTTA---------------------gccaggcgtggtggctcacacctgtaatcccagcactttgagaggccgaggcaggcagatcacctgaggtcaagagttcaagaccagtctggccaacatggtgaaaccctgtctctacgaaaaatacaaaaattagctgggcatgatggcaggtgcctgtaatcccatctactcg--------------------------------------ggaggctgaggcaggagaatcgcttaaacccaggaggtggaggttgcagtgaactgagatcactccactgcactccagcctgggtgacaaagtgagac----tctcaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879089 498 + 60714840 ccagcctggccagtatggtgaaaccctgtctccact-aaaatataaaaattagccaggcgtggtggtgtgcacctgtaatcccagctgctcaggaggctgaggcaggagaatcgcttgaacctaggaggcagaggttgcagtgatctgagatcgcaccactgcactccagcctgggcgacgcagtaagactccatctc-----------------------------------------------------------------aaaaaaaaaGGCTTa---------------------gccgggcatggtggctcacacctgtaatcccagcactttgagaggccaaggcaggcagatcacctgaggtcaagagttcaagaccagcctggccaacatggtgaaaccctgtgtctac-aaaaatacaaaaattagctgggcatgatggcgggtgcctgtaatcccatctactcg--------------------------------------ggaggctgaggcaggagaatcgcttaaacccaggaggtggaggttgcagtgagctgagatcactccactgcactccagcctgggcgacaaagtgagac----tctcaacaaaaaaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60665950 509 + 64156825 ccagcctggccaaggtggtgaaa-cccgtctctatcaaaaatacaaaaattagccaggcattgtggcatgcacctgtagccccacctacttgggaggctgaggcaggagaaacgcttgaacctgggaggcagaggttgctgtgagccaagatcccaccactgcactccagcctgggcgatgcggtaaga--ctatctcaaaaaaaagtaaaag-----------------------------------------------aaaaaaaaagaaGGCTCA---------------------gccaggcgtggtggctcacacctgtaatcccagcccttt-----gcggaggcaggcggatcacctgaggccaagagttcaagaccagcctggccaacatggtgaaaccccatatctac-aaaaatacaaaaattagctgggcatgatggcaggtgcctgtaatcccagctactca--------------------------------------ggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgctgtgagccaagatcacaccactgcactccagtctgggtgacagagcgagac----tctcaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55806968 511 + 59248254 ccagcctggccaaggtggtgaaa-cccgtctctatcaaaaatacaaaaattagccaggcattgtggcacgcacctgtagtcccacctacttgggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgccgtgagccaagatcacaccactgcactccagcctgggcgatgcagtaagactctatctcaaaaaaaaataaaag-----------------------------------------------aaaaaaaaagaaGGCTTA---------------------gccaggcgtggtggctcacacctgtaatcccagcacttt-----gccgaggcaggcggatcacctgaggccaagagttcaagaccagcctggccaacatggtgaaaccccatatctac-aaaaatacaaacattagctgggcatgatggcaggtgcctgtaatcccagctactca--------------------------------------ggaggctgaggcagcagaatcgcttaaacccgggaggtgcaggttgcagtgagccgagatcacaccactgcactccagtctgggtgacagagcgagac----tctcaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47914578 497 + 51301725 ccagcctggccaaggtggtgaaa-cccgtctctatcgaaaatacaaaaattagccaggcattgtggcatgcacctgtagtcccacctacttgggaggctgaggcaggagaatcacttgaacctgggaggcagaggttgcagtgagccaagatctcaccactgcactccagcctgggcgatgcagtaagactccatctca-------------------------------------------------------------aaaaaaaaagaaggctta---------------------gccaggcgtggtggctcacacctgtaatcccagcacttt-----gccgaggcgggcagatcacctgaggccaagagttcaagaccagcctgaccaacatggtgaaaccccatatctac-aaaaatacaaaaattagctgggcatgatggcaggtgcctgtaatcccagctactcg--------------------------------------ggaggctgaggcagcagaatcgcttaaacccgggaggtgcaggttgcagtgagctgagatcacaccactacactccagtctgggtgacagagcaagac----tctcaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47618195 551 + 50890351 ccagcctgtccaacatggtgaaaccccatatcta-caaaaatacaaaaattagctgagcatgatggcaggtgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccgagatcacaccactgcactccagcctgggcgatgcaataagactccatctcaaaaaaaaaaaaaag---------------------------------------------aagaaaaaaaaaaaGGCTTA---------------------gccaggcgtggtggctcacacctgtaatcccagcacttt-----gccgaggcgggcagatcacctgaggccaagagttcaagaccagcctgtccaacatggtgaaaccccatatctac-aaaaatacaaaaattagctgagcatgatggcaggtgcctgtaatcccagctactcgggaggctgaggcgggggaatcgcttaaacccgggaggtggaggctgaggcagcagaatcgcttaaacccaggaggtgcaggttgcagtgagccgagatcacaccactacactccagtctgggtgacagagcaagac----tctcaaaaaaaaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 34102 574 + 138250 ccatcctggccaatatggtaaaatcccatctctactaaaaatacaaaaattagccaggcatggtggcaggcatctgtagtctcagctactctggaggctgaggcaggagaaacgcttgaacctgggagacggaggctgcagtgagcagagatcatgctattgcattccagccttggccacagagcaagactccgtctcaaaaaaaaaaaaaaaTCAAAGccatcgttaataataatgcattgtatatttcaaaattcctaaaacagtaaacattcttactacaaagaaattataagatggtgaggtgtagtgactcatgcctgtaatcccaacacttt------cagaggcaggaggctcacttgagcccaggagttcaagaccagcctgggcaacatgg-gaaactccatctctacaaaaaatacaaaaa-tagccgggcatgatggtgcccacctgtagtcccagctactag--------------------------------------ggaggctgtggtgggaggatcac-agaacctgggaggcagaggctgcactgaaccaagatcaaaccactgcgctccatcctgggtgac----cgagaccctgtcccaaaaaaa--- i calJac3.chr22_GL285922_random C 0 I 448 e canFam3.chr1 20080406 0 - 122678785 C e nomLeu3.chr10 103364269 0 - 106955855 C a score=14435.000000 s hg38.chr19_GL949747v2_alt 671209 31 + 729520 aaaaaaaaaaaaaa---aGCAGCAGCATTTGTAA s panTro4.chr19 59937973 34 + 63644993 aaaaaaaaaaaaaaaGCAGCAGCAGCATTTGTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879587 22 + 60714840 gagga------------agaaGCAGCATTTGCAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60666459 18 + 64156825 aaaaaaa----------------aGCATTTGTAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55807479 21 + 59248254 aaaaaaa-------------GGCAGCATTTGTAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47915075 18 + 51301725 caaaggc----------------agcATTTGTAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47618746 26 + 50890351 aaaaaaaaa--------aaaGGCAGCATTTGTAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20080406 0 - 122678785 C e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=262604.000000 s hg38.chr19_GL949747v2_alt 671240 137 + 729520 AGCACACCTGGCACATTCTGGGCTA-TTAACAAGGAAATGC-ATGCAGCTCCCGT-CCACCTTTTTCAACCTCAGTTCTAT---TTCTTCTGGATTCCTGTGTCCTACCCCTCACTGTGACCCTGGGGGCAAAACAGA-TTTTT s panTro4.chr19 59938007 137 + 63644993 AGCACACCTGGCACATTCTGGGCTA-TTAACAAGGAAATGC-ATGCAGCTCCCGT-CCGCCTTTTTCAACCTCAGTTCTAT---TTCTTCTGGATTCCTGTGTCCTACCCCTCACTGTGACCCTGGGGGCAAAACAGA-TTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879609 138 + 60714840 AGTACACCTGGCACATTCTGGGATA-TTAACAAGGAAATGC-ATGCAGTTCCCATCCCTCCTTTTTCGACCTCAGTTCTGT---TTCTTCTGGATTTCTGTGTCCTACCCCTCACTGTGACCCTGGGGGCAAAACAGA-TTTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60666477 143 + 64156825 AGCATACCTGGCACATTCTGGGATACTTAACAAGGAAATGC-ATGCAACTCCTGTCCGTCCTTTTTGAACCTCAGTTCTATTTCTTCTTCTGGATTCTTGTGTCCTACCCCTCACTGTGACCCTGGGGGCAAAACAGACTTTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55807500 143 + 59248254 AGCACACCTGGCACATTCTGGGATACTTAACAAGGAAATGC-ATGCAACTCCTGTCCGTCCTTTTTGAACCTCAGTTCTATTTCTTCTTCTGGATTCTTGTGTCCTACCCCTCACTGTGACCCTGGGGGCAAAACAGACTTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47915093 143 + 51301725 AGCACACCTGGCACATTCTGGGATATTTAACAAGGAAATGC-ATGTAACTCCTGTCCCTCCTTTTTGAACCTcagttctgtttcttcttctggaTTCCTGGGTCCTACCCCTCACTGTGACCCTGGGGGCAAAACAGACTTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47618772 140 + 50890351 AGCACACCTGGCACATTCTGGGATACTTAACAAGGAAATGC-ATGTAACTCCTGTCCCTCCTTTTTGAACCTGAGTTCTAT---TTCTTCTGGATTCCTGTGTCCTACTCCTCACTGTGACCCTGGGGGCAAAACAGACTTTTT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20080406 140 - 122678785 AGCACACCTAGCACATTCTGGACTAGTTTATATCGACAGGCTTTATAGCTGCC-TCCCTGCTTTTCGAACCTCAGCTCTGC--CCTTTTCTAGATCTCTGTGACCTGCACCTTACATTGCCCCTAGTAGCAAAACTGGCTCTT- i canFam3.chr1 C 0 I 5509 e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=58626.000000 s hg38.chr19_GL949747v2_alt 671377 34 + 729520 CTACC-AAAAACTAAATGATGTATTTTGTTTGATT s panTro4.chr19 59938144 34 + 63644993 CTACC-AAAAACTAAATTATGTATTTTGTTTGATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879747 34 + 60714840 CTACC-AGACACTAAATGATGTATTTTGTTTGATT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60666620 35 + 64156825 CTACCAAAAAACTAAATGATGTATTTTGTTTGATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55807643 35 + 59248254 CTACCAAAAAACTAAATGATGTATTTTGTTTGATT i macFas5.chr19 C 0 I 512 s papAnu2.chr19 47915236 35 + 51301725 CTACCAAAAAACTAAATGATGTATTTTGTTTGATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47618912 35 + 50890351 CTACCAAAAAACTAAATGATGTATTTTGTTTGATT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=17577.000000 s hg38.chr19_GL949747v2_alt 671411 9 + 729520 TAATATGAc s panTro4.chr19 59938178 9 + 63644993 TAATATGAc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879781 9 + 60714840 TAATATGAC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60666655 9 + 64156825 TAATATGAC i rheMac3.chr19 C 0 I 336 s macFas5.chr19 55808190 9 + 59248254 TAATATGAc i macFas5.chr19 I 512 C 0 s papAnu2.chr19 47915271 9 + 51301725 TAATATGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47618947 9 + 50890351 TAATATGAc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=-3977.000000 s hg38.chr19_GL949747v2_alt 671420 1 + 729520 -a s panTro4.chr19 59938187 1 + 63644993 -a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879790 1 + 60714840 -C i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55808199 1 + 59248254 g- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47915280 1 + 51301725 G- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47618956 1 + 50890351 g- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C e rheMac3.chr19 60666664 336 + 64156825 I a score=388638.000000 s hg38.chr19_GL949747v2_alt 671421 233 + 729520 ttgttaaatgtactgatcagtggcgttgggtatgttcacattgtggtacaatatgttgacctctagaacttatttttcttgcaaaactgaaattctgtgcccattaaacactaattccttctctctcctctttctggcccttaacaaccaccattgtactttgtgtttctacagtgttgacattagatacctcctttgactagaatcat-acagtagttgtccttttg----tgactg s panTro4.chr19 59938188 237 + 63644993 ttgttaaatgtactgatcagtggcgttgggtatgttcacactgtggtacaatatgttgacctctagaacttatttttcttgcaaaactgaaattctgtgcccattaaacactaattccttctctctcctctttctggcccttaacaaccaccattgtactttgtgtttctacagtgttgacattagataccttctttgagtagaatcat-acagtagttgtccttttgtgactgactg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879791 233 + 60714840 TGGttaagtgtgctcatccgtggcgttgggtatgttcacactgtggtacaacgtgttgacctctaaaacgtatttttcttgcaaaactgaaactctgtgcctattaaacactaattccttctctcccctctttctggcccttaacaaccaccattgtactttgtgtttctacagtgttgacattagataccgcctttgagtagaatcat-acactagttgtccttttg----tgactg i ponAbe2.chr19 C 0 I 4084 s rheMac3.chr19 60667000 234 + 64156825 ttgttaagtgtactgaccagtggcattgggtatgttcacattgtggtacaatatgttgacctctagaagttatttttcttgcaaaactgaaactctatgcccattaaacactaattcctgctctcccctctttctggcccttaacaaccaccgttgtactttgtgtttctataattttgacattagatacctcctttgagtagaatcataatagtagttgtcctttta----tgactg i rheMac3.chr19 I 336 I 9 s macFas5.chr19 55808200 234 + 59248254 ttgttaagtgtactgaccagtggcattgggtatgttcacattgtggtacaatatgttgacctctagaagctatttttcctgcaaaagtgaaactctatgcccattaaacactaattcctgctctcccctctttctgtcccttaacaaccaccgttgtactttgtgtttctataattttgacattagatacctcctttgagtagaatcataatagtagttgtcctttta----tgactg i macFas5.chr19 C 0 I 9 s papAnu2.chr19 47915281 233 + 51301725 TTGTTAAGTGTACTGACCAGTGGCATTGGGTATGTTCACATTGTGGTACAATATGTTGACCTCTAGAAGCTATttttcttgcaaaactgaaactctatgcccATTAAACACTCATTCCTGCTCTCCCCTCTTTCTGGCCCTTAACAACCACCGTTGTACTTTGTGTTTCTACAATTTTGACATTAGATACCTCCTTTGAGTAGAATCAT-ATAGTAGTTGTCCTTTTA----tgactg i papAnu2.chr19 C 0 I 9 s chlSab2.chr6 47618957 214 + 50890351 ttgttaagtgcactgaccagtggcattgggtatgttcacattgtggtacaatat-----------gaagttattttttttgcaaaactgaaactctatgcccattaaacactaattcctgctctcccctctttctggcccttaacaaca--------attttgtgtttctacaattttgacattagatacctcctttgagtagaatcat-acagtagttgtccttttg----tgactg i chlSab2.chr6 C 0 I 9 e canFam3.chr1 20080546 5509 - 122678785 I e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=273542.000000 s hg38.chr19_GL949747v2_alt 671654 155 + 729520 acttagcataatgtcctcaaggtatatccatgttgtagtatgtgtcagaatttccttcttttttaaggctgcataatattccattgcatgta---------------------------------tataaccacat------------------------------------tatgAGGTATGCTGCTCTTTTTTGAAAGAAACCCCCTTTAAGAATGGTAGTC s panTro4.chr19 59938425 155 + 63644993 acttagcataatgtcctcaaggtatatccatgttgtagtctgtgtcagaatttccttcttttttaaggctgcataatattccattgcatgta---------------------------------tataaccacat------------------------------------tatgAGGTATGCTGCTCTCTTTTGAAAGAAACCCCCTTTAAGAATGGTAGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884108 152 + 60714840 acttagcataatgtcctcaagataaatccatgttgtagtatgtgtcagaatttc---cttttttaaggctgcataatattccattgcatgta---------------------------------tataaccacat------------------------------------tatgAGGTATGCTGCTCTCTTTTGAGAGAAACCCCCTTTAAGAATGGTAGCC i ponAbe2.chr19 I 4084 C 0 s rheMac3.chr19 60667243 224 + 64156825 acttagcataatgttctcaaggtatatccatgttgtagtatatgtcagaatttccttcttttttaaggctgcgtaatattccattgcatgtatataaccacattGTTATACACATGTGGTATGTGTATAACCACATTGTTATATACATGTGGTATGTGTATAACCACATATATATGAGGTATGCTGCTCTCTTTTGAAAGAAACCCCCTTTAAGAATGGTAGCC i rheMac3.chr19 I 9 C 0 s macFas5.chr19 55808443 224 + 59248254 acttagcataatgttctcaaggtatatccatgttgtagtatatgtcagaatttccttcttttttaaggctgcgtaatattccattgcatgtatataaccacattgttatatacatGTGGTATGTGTATAACCACATTGTTATATACATGTGGTATGTGTATAACCACATATATATGAGGTATGCTGCTCTCTTTTGAAAGAAACTCCCTTTAAGAATGGTAGCC i macFas5.chr19 I 9 C 0 s papAnu2.chr19 47915523 191 + 51301725 acttagcataatgttctcaaggtatatccatgttgtagtatgtgtcagaatttccttcttttttaaggctgcgtaatattccattgcatgta---------------------------------tataaCCACATTGTTATATACATGTGGTATGTGTATAACCACATATATATGAGGTATGCTGCTCTCTTTTGAAAGAAACCCCCTTTAAGAATGGTAGCC i papAnu2.chr19 I 9 C 0 s chlSab2.chr6 47619180 205 + 50890351 acttagcataatgtcctcaaggtaaatccatgttgtagtaggtgtcagaatttccttcttttttaaggttgcgtaatattccattgcatgtatataaccacattgttatatacatGTGGTATGTATATAACCAC-------------------ATGTATATAACCACATATATATGAGGTATGCTGCTCTCTTTTGAAAGAAACTCCCTTTAAGAATGGTAGCC i chlSab2.chr6 I 9 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=168449.000000 s hg38.chr19_GL949747v2_alt 671809 73 + 729520 AAGTCCgacgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcagatca--tgaggtc---ag s panTro4.chr19 59938580 76 + 63644993 AAggccgacgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcagatca--tgaggtcaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884260 76 + 60714840 AAggccggcgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggcagatca--tgaggtcaggag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60667467 76 + 64156825 AAGGCTggcacggtggttcacgcctgtaatcccagcactttgggaggctgaggcaggcagatca--tgaggtcaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55808667 76 + 59248254 AAGGCTggcacggtggttcacgcctgtaatcccagcactttgggaggctgaggcaggcagatca--tgaggtcaggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47915714 76 + 51301725 AAGgctggcacggtggttcacgcctgtaatcccagcactttgggaggctgagacaggcagatca--tgaggtcaggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47619385 76 + 50890351 AAGTCTggcatggtggttcacgcctgtaatcccagcactttgggaggctgaggcaggcagatca--tgaggtcagaag i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 35124 75 + 138250 Aggccaggtgcggtggctcacgcctgcactcccagcactttgggaggttgaggcaggcagatcacctgaggtcag--- i calJac3.chr22_GL285922_random I 448 I 3 e canFam3.chr1 20080546 5509 - 122678785 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=633731.000000 s hg38.chr19_GL949747v2_alt 671882 215 + 729520 ttcaagaccagcctgaccaacatagtgaaaccccgtctctactaaaaatacaaaaattggccgggcatggtggcaggcacctgtaattccagctactcgagaggctgaggcagcagaatcgcttgaacccggaaggcggaggttgcagtgagctgagatcgcgccactgcactccagcctgggtgacagagtgagacttcgtc----aaaaaaaaaaaa s panTro4.chr19 59938656 217 + 63644993 ttcaagaccagcctgaccaacatagtgaaaccctgtctctactaaaaatacaaaaattggccgggcatggtggcaggcacctgtaattccagctactcgagaggctgaggcaggaggatcgcttgaacccggaaggcggaggttgcagtgagctgagatcgtgccactgcactccagcctgggtgacagagtgagacttagtc--aaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884336 213 + 60714840 ttcgagaccagcctgaccaacatagtgaaaccccgtctctactaaaaatacaaaagttagccgggcatggtggcaggcacctgtaatcccagctactcgagaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatagtgccactgcactccagcctgggtgac--agtgagacctcgtc----aaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364269 218 - 106955855 ttcgagaccagcctgaccaacatagtgaaaccccgtctctactaaaaatacaaaa-ttagccgggcatggtggcaggcacctgtcatcccagctactcgagaggctgaggcaggagaatcgcttgaacccgggaggcggaggttacagtgagctgagatcgcaccactgcactccagcctgggtgacagagtgagacctcgtcaaaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60667543 215 + 64156825 ttcgagaccagcatgacccacagagtgaaaccccgtctctactaaaaatacaaaaatgagccgggcatggtggcatgcacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggagccagaagttgcagtgagctgagatcgccccatagcgctccagcctgggtgacagagtgagacttcatc----aaaaaaaaaaaa i rheMac3.chr19 C 0 I 35 s macFas5.chr19 55808743 215 + 59248254 ttcgagaccagcctgacccacagagtgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggcatgcacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagatcgccccatagcactccagcctgggtgacagagtgagacttcatc----aaaaaaaaaaaa i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47915790 215 + 51301725 ttcgagaccagcctgacccacagagtgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggcatgcacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagatcgccccacagcactccagcctgggtgacagagtgagacttcatc----aaaaaaaaaaaa i papAnu2.chr19 C 0 I 11 s chlSab2.chr6 47619461 213 + 50890351 ttcgagatcagcctgacccac--ggtgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggcaggcacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacctgggagacggaggttgcagtgagctgagatcgccccactgcactccagcctgggtgacagagtaagacttcatc----aaaaaagaaaag i chlSab2.chr6 C 0 I 2 s calJac3.chr22_GL285922_random 35202 215 + 138250 ttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgagtgtggtggcgcacacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagctgagatcacaccactgcactccagcctagatgatagagtgagactccatc----aaaaaaaggaaa i calJac3.chr22_GL285922_random I 3 C 0 e canFam3.chr1 20080546 5509 - 122678785 I a score=52134.000000 s hg38.chr19_GL949747v2_alt 672097 24 + 729520 aagaaaCCTCCATTCTCCCAGCTG s panTro4.chr19 59938873 24 + 63644993 aagaaaCCTCCATTCTCCCAGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884549 24 + 60714840 aagaaaCCTCCGTTCTCCCAGCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364487 24 - 106955855 aagaaaCCTCTATTCTCCCAGCTG i nomLeu3.chr10 C 0 I 54 s macFas5.chr19 55808969 24 + 59248254 aagaaaCCTCCATCCTCCCAGATG i macFas5.chr19 I 11 C 0 s papAnu2.chr19 47916016 24 + 51301725 aagaaacctccaTCCTCCCAGCTG i papAnu2.chr19 I 11 C 0 s chlSab2.chr6 47619676 24 + 50890351 aagaaaCCTCCATCCTCCCAGATG i chlSab2.chr6 I 2 C 0 s calJac3.chr22_GL285922_random 35417 19 + 138250 -----aCCTACATCCTCCCAGCTG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e rheMac3.chr19 60667758 35 + 64156825 I a score=5865.000000 s hg38.chr19_GL949747v2_alt 672121 4 + 729520 CCTG s panTro4.chr19 59938897 4 + 63644993 CCTG i panTro4.chr19 C 0 I 54 s nomLeu3.chr10 103364565 4 - 106955855 CCTG i nomLeu3.chr10 I 54 C 0 s macFas5.chr19 55808993 4 + 59248254 CCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47916040 4 + 51301725 CCTG i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 35436 4 + 138250 CCTG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e chlSab2.chr6 47619700 0 + 50890351 C e rheMac3.chr19 60667758 35 + 64156825 I a score=43445.000000 s hg38.chr19_GL949747v2_alt 672125 38 + 729520 TAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACC s panTro4.chr19 59938955 38 + 63644993 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACT i panTro4.chr19 I 54 C 0 s nomLeu3.chr10 103364569 38 - 106955855 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCTACT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55808997 38 + 59248254 CAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACC i macFas5.chr19 C 0 T 42 s papAnu2.chr19 47916044 38 + 51301725 CAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACC i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 35440 38 + 138250 AAGCCTGGGGCTTCCTGCCCTCTCGTTTCCTTTGCACC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e chlSab2.chr6 47619700 0 + 50890351 C e rheMac3.chr19 60667758 35 + 64156825 I a score=7133.000000 s hg38.chr19_GL949747v2_alt 672163 11 + 729520 TCTGGCCCCGC s panTro4.chr19 59938993 11 + 63644993 TATGGCCCCTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103364607 11 - 106955855 TATGGCCCCTC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47916082 11 + 51301725 TATGGCCCCTC i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 35478 11 + 138250 CAGGGCCCCAC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=600.000000 s hg38.chr19_GL949747v2_alt 672174 1 + 729520 C s panTro4.chr19 59939004 1 + 63644993 C i panTro4.chr19 C 0 T 108 s nomLeu3.chr10 103364618 1 - 106955855 C i nomLeu3.chr10 C 0 T 108 s papAnu2.chr19 47916093 1 + 51301725 C i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=1746.000000 s hg38.chr19_GL949747v2_alt 672175 3 + 729520 CCT s panTro4.chr19 59938897 3 + 63644993 CCT i panTro4.chr19 T 108 C 0 s nomLeu3.chr10 103364511 3 - 106955855 CCT i nomLeu3.chr10 T 108 C 0 s papAnu2.chr19 47916094 3 + 51301725 CCT i papAnu2.chr19 C 0 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=27381.000000 s hg38.chr19_GL949747v2_alt 672178 51 + 729520 GCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCCGCC s panTro4.chr19 59938900 51 + 63644993 GCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i panTro4.chr19 C 0 T 54 s nomLeu3.chr10 103364514 51 - 106955855 GCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i nomLeu3.chr10 C 0 T 54 s papAnu2.chr19 47916043 51 + 51301725 GCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCTCC i papAnu2.chr19 T 54 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=29127.000000 s hg38.chr19_GL949747v2_alt 672229 54 + 729520 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCCGCC s panTro4.chr19 59938897 54 + 63644993 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i panTro4.chr19 T 54 T 54 s nomLeu3.chr10 103364511 54 - 106955855 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i nomLeu3.chr10 T 54 T 54 s papAnu2.chr19 47916040 54 + 51301725 CCTGCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCTCC i papAnu2.chr19 T 54 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=29127.000000 s hg38.chr19_GL949747v2_alt 672283 54 + 729520 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCCGCC s panTro4.chr19 59938897 54 + 63644993 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i panTro4.chr19 T 54 C 0 s nomLeu3.chr10 103364511 54 - 106955855 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i nomLeu3.chr10 T 54 T 54 s papAnu2.chr19 47916040 54 + 51301725 CCTGCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCTCC i papAnu2.chr19 T 54 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=28734.000000 s hg38.chr19_GL949747v2_alt 672337 54 + 729520 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCCGCC s panTro4.chr19 59938951 54 + 63644993 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACTTATGGCCCCTCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103364511 54 - 106955855 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i nomLeu3.chr10 T 54 C 0 s papAnu2.chr19 47916040 54 + 51301725 CCTGCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCTCC i papAnu2.chr19 T 54 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=26564.000000 s hg38.chr19_GL949747v2_alt 672391 51 + 729520 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCC s panTro4.chr19 59939005 51 + 63644993 CCTGCAGCCCAGGGCTTCCTGCTCTCCCACTTCCTTCCCACTTACGGCCCC i panTro4.chr19 C 0 T 54 s nomLeu3.chr10 103364565 51 - 106955855 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCTACTTATGGCCCC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47916040 51 + 51301725 CCTGCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCC i papAnu2.chr19 T 54 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=2484.000000 s hg38.chr19_GL949747v2_alt 672442 6 + 729520 GCCCCT s panTro4.chr19 59939002 6 + 63644993 TCCCCT i panTro4.chr19 T 54 C 0 s nomLeu3.chr10 103364616 6 - 106955855 TCCCTT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47916091 6 + 51301725 TCCCCT i papAnu2.chr19 C 0 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=600.000000 s hg38.chr19_GL949747v2_alt 672448 1 + 729520 G s panTro4.chr19 59939008 1 + 63644993 G i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103364622 1 - 106955855 G i nomLeu3.chr10 C 0 T 54 s papAnu2.chr19 47916043 1 + 51301725 G i papAnu2.chr19 T 54 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=19392.000000 s hg38.chr19_GL949747v2_alt 672449 37 + 729520 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCAC s panTro4.chr19 59939009 37 + 63644993 CAGCCCAGGGCTTCCTGCTCTCCCACTTCCTTCCCAC i panTro4.chr19 C 0 T 149 s nomLeu3.chr10 103364569 37 - 106955855 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCTAC i nomLeu3.chr10 T 54 C 0 s papAnu2.chr19 47916044 37 + 51301725 CAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCAC i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=2260.000000 s hg38.chr19_GL949747v2_alt 672486 13 + 729520 CTCTGGCGCCGCC s nomLeu3.chr10 103364606 13 - 106955855 TTATGGCCCCTCC i nomLeu3.chr10 C 0 T 108 s papAnu2.chr19 47916081 13 + 51301725 CTATGGCCCCTCC i papAnu2.chr19 C 0 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I e panTro4.chr19 59939046 149 + 63644993 T a score=28425.000000 s hg38.chr19_GL949747v2_alt 672499 54 + 729520 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCTTTCCCACCTATGGCCGCGCC s panTro4.chr19 59938897 54 + 63644993 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i panTro4.chr19 T 149 C 0 s nomLeu3.chr10 103364511 54 - 106955855 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i nomLeu3.chr10 T 108 T 54 s papAnu2.chr19 47916040 54 + 51301725 CCTGCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCTCC i papAnu2.chr19 T 54 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=1953.000000 s hg38.chr19_GL949747v2_alt 672553 4 + 729520 CCTA s panTro4.chr19 59938951 4 + 63644993 CCTG i panTro4.chr19 C 0 T 54 s nomLeu3.chr10 103364511 4 - 106955855 CCTG i nomLeu3.chr10 T 54 C 0 s papAnu2.chr19 47916040 4 + 51301725 CCTG i papAnu2.chr19 T 54 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=26781.000000 s hg38.chr19_GL949747v2_alt 672557 50 + 729520 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCCGCC s panTro4.chr19 59938901 50 + 63644993 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i panTro4.chr19 T 54 C 0 s nomLeu3.chr10 103364515 50 - 106955855 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i nomLeu3.chr10 C 0 T 54 s papAnu2.chr19 47916044 50 + 51301725 CAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCTCC i papAnu2.chr19 C 0 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=27534.000000 s hg38.chr19_GL949747v2_alt 672607 52 + 729520 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCCG s panTro4.chr19 59938951 52 + 63644993 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACTTATGGCCCCT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103364511 52 - 106955855 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCT i nomLeu3.chr10 T 54 C 0 s papAnu2.chr19 47916040 52 + 51301725 CCTGCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCT i papAnu2.chr19 T 54 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=2000.000000 s hg38.chr19_GL949747v2_alt 672659 2 + 729520 CC s panTro4.chr19 59939003 2 + 63644993 CC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103364563 2 - 106955855 CC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47916092 2 + 51301725 CC i papAnu2.chr19 C 0 T 54 s canFam3.chr1 20086055 2 - 122678785 CC i canFam3.chr1 I 5509 C 0 e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=113569.000000 s hg38.chr19_GL949747v2_alt 672661 42 + 729520 CCTGCAGCCCAGGGCT--TCCTGCCCTCCCACTTCCTTCCCACT s panTro4.chr19 59939005 42 + 63644993 CCTGCAGCCCAGGGCT--TCCTGCTCTCCCACTTCCTTCCCACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884573 42 + 60714840 CCTGCAGCCCAGGGCT--TCCTGCCCTCCCACTTCCTTCCCACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364565 42 - 106955855 CCTGCAGCCCAGGGCT--TCCTGCCCTCCCACTTCCTTCCTACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60667793 42 + 64156825 CCTGCAACCCAGGGCT--TCCTGCCCTCCCACGTCCTCCCTACC i rheMac3.chr19 I 35 C 0 s macFas5.chr19 55808993 42 + 59248254 CCTGCAACCCAGGGCT--TCCTGCCCTCCCACGTCCTCCCCACC i macFas5.chr19 T 42 C 0 s papAnu2.chr19 47916040 42 + 51301725 CCTGCAACCCAGGGCT--TCCTGCCCTCCCACGTCCTCCCCACC i papAnu2.chr19 T 54 C 0 s chlSab2.chr6 47619700 42 + 50890351 CCTGCAACCCAGGGCT--TCCTGCCCTCCCACTTCCTCCCCACC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20086057 44 - 122678785 TCCAAAGCCTCAGGCTTCTCCTCGCCTCCCACCCCCTTCACACC i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 35489 0 + 138250 C a score=2548.000000 s hg38.chr19_GL949747v2_alt 672703 1 + 729520 T s panTro4.chr19 59939047 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884615 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364607 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60667835 1 + 64156825 T i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47916082 1 + 51301725 T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47619742 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20086101 1 - 122678785 T i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 35489 0 + 138250 C e macFas5.chr19 55809035 0 + 59248254 C a score=25753.000000 s hg38.chr19_GL949747v2_alt 672704 9 + 729520 -ATGGCCCCT s panTro4.chr19 59939048 9 + 63644993 -ACGGCCCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884616 9 + 60714840 -ACGGCCCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364608 9 - 106955855 -ATGGCCCCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60667836 9 + 64156825 -ATGGCCCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55809035 9 + 59248254 -ATGGCCCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47916083 9 + 51301725 -ATGGCCCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47619743 9 + 50890351 -ATGGCCCCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20086102 10 - 122678785 GTTGGCCCCT i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 35489 0 + 138250 C a score=15792.000000 s hg38.chr19_GL949747v2_alt 672713 5 + 729520 CCCTT s panTro4.chr19 59939057 5 + 63644993 CCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884625 5 + 60714840 CCCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364617 5 - 106955855 CCCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60667845 5 + 64156825 CCCCT i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55809044 5 + 59248254 CCCCT i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47916092 5 + 51301725 CCCCT i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47619752 5 + 50890351 CACTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 35489 5 + 138250 CCCTT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20086112 5 - 122678785 CCCCT i canFam3.chr1 C 0 C 0 a score=2106978.000000 s hg38.chr19_GL949747v2_alt 672718 651 + 729520 GGAATGGCCATCAGGACCTATAAAGGCTGAGGAAGAAAGGTTTGGTCTGCACTACCCCTACCTGTGACCACAAGCTCCAGGGGGTCGCTGGGGGCTGACCACAGGTATGGGTCCCTGCTGGAGAAGCTGTAGCATCGGTAGGTTCCGCTGTGGGCGGCGGTCACCGTGATGATGGGAAAACTAGCCCTGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGAGTCTGACACTGTAGGGTTACGTCCCCTCCTGACGACACCGCCGGGCCGGGCTGGGCTGAGAGCGAGGGTTTGGCAAAAACTCCTGGGAGAAAAAG-AAAGTCTGATGTTGAAGGCAGGAGCCAGCATCTCAGC--TGAGACTGGGGAGGTCCCCACACCTGCCTAAGAGCTGGGGAGCTTTTT-----------------GGCTGTATCCCTCCCAGAGAGCGCACTCCCCCACCCA--AGCT--CACagagaggtcgagtc-acccagtggttgaggaag-gaggctgt--gctcacgtcctagtgcttgggtgcaaatcctagttctgccttcaggggcctggtggccctggagacaaatct--ccctctgtatctgagcctcactgccttgttctgttaaaatggggatgactg s panTro4.chr19 59939062 629 + 63644993 GGAATGGCCATCAGGACCTATAAAGGCTGAGGAAGAAAGGTTTGGTCTGCACTACCCCTACCTGTGACCACAAGCTCCAGGGGGTCGCTGGGGGCCGACCACAGGTATGGGTCCCTGCTGGAGAAGCTGTAGCATCGGTAGGTTCCGCTGTGGGCGGCGGTCACCGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGAGTCTGACACTGTAGGGTTACGTCCCCTCCTGAGGACACCGCCGGGCTGGGCTGGGCTGAGAGCGAGGGTTTGGCAAAAACTCCTGGGAGAAAAAT-AAAGTCTGATGTTAAAGGCAGCAGCCAGCATCTCAGC--TGAGACTGGGGAGGTCCCCACACCTGCCTAAGAGCTGGGGAGCTT---------------------------------------AGCGCACTCCCCCACCCA--AGCT--CACAGAGAGGTCGAGTC-ACCCAGTGGTTGAGGAAG-GAGGCTGT--GCTCACGTCCTAGTGcttgggtgcaaatcctagttctgcctgtaggggcctggtggccctggagacaaatct--ccctccgtatctgagcctcgctgccttgttctgttaaaatggggatgactg i panTro4.chr19 C 0 I 1 s ponAbe2.chr19 56884630 653 + 60714840 GGAATGGCCATCAGGACCTATAAAGGCTGAGGAAGAAAGGTTTGGTCTGCACCACCCCTACCTGTGACCACGAGCTCCAGGGGGTCACTGGGGGCCGACCACAGGTATGGGTCCCCACTGGAGAAGCTGTAGCATCGGTAGGTTCCGCTGTGGGCGGCGGTCACCGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGAGTCTGACACTGTAGAGTTACGTCCCCTCCTGAGGACACCGCTGGGCCGGGCTGGGCTGAGAGCGAGGGCTTGGCAAAAACTCCTGGGAGAAAAGGAAAAGTCTGATGTTAAAGGCAGCAGCCAGCATCTCAGC--TGAGACTGGGGAGGTCCCCACACCTGCCTAAGGGCTGGGGAGCTTTTT-----------------GGCTGTATCCCTCCCAGAGAGCGCACTCCCCCACCCA--AGCT--CACAGAGAGGTGAGGTTGAGGAAGTGGTTGAGGAAGCGAGGCTGT--GCTCACGTCCTAGTGcttgggtgaaaatcctagttctgcctttaagggcctggt-gccctggagacaaatct--ccctctgtatctgagcctcactgccttgttctgttaaaatggggatgaCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364622 651 - 106955855 GGAATGGCCATCAGGACCTATAAAGTCTGAGGAAGAAAGGTTTGGTCTGCACCACCCCTACCTGTGACCAGGAGCTCCAGGGGGTCGCTGGGGGCCGACCACAGGTATGGGTTCCCGCTGGAGAAGCTGTAGCATCGGTAGGTTCCGCTGTGGGCGGCGGTCACTGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGAATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCTTCCTGAGTCTGACACTGTAGGGTTACGTCCCCTCCTGAGGACACCGCCGGGCCTGGCTGGGCTGAGAGCGAGGGCTTGGCAAAAACTCCTGGGAGAAAAGG-AAAGGCTGATGTTAATGGCAGCAGCCAGCATCTCAGC--TGAGACTGGGGAGGTCCCCACACCTGCCTAAGAGCTGGGGAGGTTTTT-----------------GGCCGTATCCCTCCCAGAGAGTGCACTCCCCCACCCA--AGCT--CACAGACAGGTCGGGTC-ACCGAGTGGTTGAGGAAGCGAGGCTGT--GCTCACGTCCTAGTGcttgggtgcaaatcctagttgtgcctttaagggcctggtggccctggagacaaatct--ccctctgtgtctgagcctcactgccttg-tctgttaaaatgggggtgactg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60667851 664 + 64156825 GGAATGGCCCTCAGGACCTACAAAGGCTGAGGAACAAAGGTTTGGTCTGCACCACCCCTACCTGTGACCATGAGCTCCAGGGGGTCGCTGGGAGCCGACCACAGGTATGGGTCCCCGCTGGAGAAGCTGTAGCACCGGTAGGTTCCGCTGTGGGCAGCGGTCACCGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGGGTCTGACACTGTAGGGTCACGTCCCCTCCTGAGGACACCGCCGGGCCGGGCTGGGCTGAGAGCGAGGGCTTGGCAAAAACTCCTGGGAAAAAAGG-AAAGTCTGATGTTAAAGGCAGCAGCCAGCATCTCAGC--TCAGACTGGGGAGGTGCCCACACCTGCCTGAGAGCTGGGGAGCTTTCTGGCTGTATCCCTCCCAGGGCTGTATCCCTCCCAGACAGCACACTCCCCCACCCA--AGCTCACACAGAGAGGTCAAG-C-ACCAagtggttgaggaagcgaggctgtgtgcccacatcctagtgcctgggtgcgaatcctggttctgcctttaa-------gtggccccggagacaaatct---cctctgtatctgagcctcactgccttgttctgctaaaatggggatgatcg i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55809050 645 + 59248254 GGAATGGCCCTCAGGACCTACAAAGGCTGAGGAACAAAGGTTTGGTCTGCACCACCCCTACCTGTGACCATGAGCTCCAGGGGGTCGCTGGGAGCCGACCACAGGTATGGGTCCCCGCTGGAGAAGCTGTAGCACCGGTAGGTTCCGCTGTGGGCAGCGGTCACCGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGGGTCTGACACTGTAGGGTCACGTCCCCTCCTGAGGACACCGCCGGGCCGGGCTGGGCTGAGAGCGAGGGCTTGGCAAAAACTCCTGGGAGAAAAGG-AAAGTCTGATGTTAAAGGCAGCAGCCAGCATCTCAGC--TCAGACTGGGGAGGTGCCCACACCTGCCTGAGAGCTGGGGAGCTTTCT-----------------GGCTGTATCCCTCCCAGACAGCACACTCCCCCACCCA--AGCT--CACAGAGAGGTCAAG-C-ACCAagtggttgaggaagcgaggctgtgtgcccacatcctagtgcctgggtgcgaatcctggttctgcctttaa-------gtggccccggagacaaatct---cctctgtatctgagcctcactgccttgttctgctaaaatggggatgatcg i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47916098 647 + 51301725 GGAATGGCCCTCAGGACCTACAAAGGCTGAGGAAGAAAGGTTTGGTCTGCACCACCCCTACCTGTGACCATGAGCTCCAGGGGGTCGCTGGGAGCCGACCACAGGTATGGGTCCCTGCTGGAGAAGCTGTAGCACCGGTAGGTTCCGCTGTGGGCAGCGGTCACCGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGGGTCTGACACTGTAGGGTCACGTCCCCTCCTGAGGACACCGCCGGGCCGGGCTGGGCTGAGAGCGACGGCTTGGCAAAAACTCCTGGGAGAAAAGG-AAAGTCTGATGTTAAAGGCAGCAGCCAGCATCTCAGC--TGAGACTGGGGAGGTGCCCACACCTGCCTGAGAGCTGGGGAGCTTTCT-----------------GGCTGTATCCCTCCCAGACCGCACACTCCCCCACCCA--AGCT--CACAGAGAGGTCAAGTC-ACCGAGTGGTTGAGGAAGCGGGGCTGTGCGCTCACATCCTAGTGCCTGGGtgcaaatcctggttctgccttTAA-------GTGGCCCCGGAGACAAATCT--CCCTCTGTGTCTGAGCCTCAGTGCCTTGTTCTGCTAAAACGGGGATGATCG i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47619757 646 + 50890351 CGAATGGCCCTCAGGACCTACAAAGGCTGAGGAAGACAGGTTTGGTCTGCACCACCCCTACCTGTGACCATGAGCTCCAGGGGGTCGCTGGGAGCCGACCACAGGTATGGGTCCCTGCTGGAGAAGCTGTAGCACCGGTAGGTTCCGCTGTGGGCAGCGGTCACCGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGGGTCTGACACTGTAGGGTCACGTCCCCTCCTGAGGACACCGCCGGGCCGGGCTGGGCTGAGAGCGAGGGCTTGGCAAAAACTCCTGGGAGAAAAGG-AAAGTCTGATGTTAAAGGCAGCAGCCAGCGTCTCAGC--TGAGACTGGGGAGGTGCCCACACCTGCCTGAGAGCTGGGGAGCTTTCT-----------------GGCTGTATCCGTCCCAGACAGCGCACTCCCCCAGCCA--AGCT--CACAGAGAGGTCAAG-C-ACCGAGCGGTTGAGGAAGCGAGGCTGTGTGCCCACATTCTAGTGcctgggtgcgaatcccggttctgcctttaa-------gtggccccggagacaaatct--ccctctgtgtctgagcctcagtgccttgttctgctaaaatggggatgatcg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 35494 637 + 138250 GGAATGGCTATCAGGACCTAAAAAGGTTGAGGAAGAAAGGTTTGGTCTGCAACACCCCTACCTGTGACCACGAGCTCCAGGGGATCACTGGGGGCCGACCACAGGTATGGGGCCCTTCTGGAGAAGCTGTAGCAGCGGTAGGTCCCGCTGTGGGCAGCGGTTACCGTGGTGATGGGGAAGCTAGCCCGGTACCATCTCTCGGGGTTCCTGTAGGGTCCAGGGTCGCCGTCCTTGTACAGAGCAAATTGGTCAAAGCCATATTTGGTCTGACACCGTAGGGTCACATCCCCTCCTGGGGACACTGCCGGGCCAGGCTGGGCTGAGAGCGAGGGCTTAGGAAAAACTCCTGGGAGAAAAGG--AAGTCTGGTGTTAAAGGCG------AGTATCTCAGC--TGGGGCT-GGGAGGTCCCCCCGCCTGCCCAA--GCTGGGGAGCTTTAT-----------------GGCTGTATCCCTCCCAG--AGTGCACTCCCTTGCCCC--AGCT--CAGAGAGAGGTCAAGTC-A-TGAATGGTTTACAGAGTGAGGCTGT--GCCCACATCCTAGTGctt-ggtgcaaaccctggttctgcccttaggggcta-gtggccctggagaccaatct--ccctctgtatctgagcctcactaccttgttttgttaaagtggggatgattg i calJac3.chr22_GL285922_random C 0 I 661 s canFam3.chr1 20086117 615 - 122678785 GGAACTTCCACCAGAGTATGCAAGAGCTGAAGAAGAAAGGCTTGGACTGCATCTCCCTCACCTGTTACCACAAGCTCCAGGGGGTCGCTGGGGGCTGACCACAGGTACGGGAACTTGCTGGAAAAGCTATAGCATCGGTAGATCCCACTGTGGGCAACAGTCACTGCGGTGATGGGGAAATTGGCCCAGTACTGTTCTGCAGATTGCTTGTGGGGCTCAGTGTCCCCCTCCTTGTACAGAGCGAATTGGTCAAAACTGTATTTACTCTGACATCGTAGAGTGACATCCCCTCCTTGGGACACAGCCAGGCTGGGCTGGGCTGAGAGTGAGGGCTTAGCATAAACTCCTGGTTGAAAAGA-GAGCTCTGGTGTTAAAGACCATGGAAAGTGTGTTGACCATGGGGGTAGGAAGATTCCCCCCACCTCCTAAGAGCTAGGAAACTCTTC-----------------AGGTATATCCCTTCTAGAGAACCCACTCACCCTGCTACCAACT--CACAAAAGGGT-----T-A----------AAGGGAGCATGACCAA--GATCATATCACAGTTCCCAGGCTCAAAT----------CGCTTAGGGGCTGTGTGATCCTGGAGATAAACCTACCCCTCTATCTGTGTGCCTCAGTGTTCTTTACTG------------------ i canFam3.chr1 C 0 C 0 a score=126354.000000 s hg38.chr19_GL949747v2_alt 673369 56 + 729520 aatgagacagtacacagtaa----tttgcagag-tgcctgttgcctag-caagcgctg------------gagt s panTro4.chr19 59939692 52 + 63644993 aatgagacagtacacagtaa----tttgcagag-tgcccgttgcctag-caggcgctg---------------- i panTro4.chr19 I 1 C 0 s ponAbe2.chr19 56885283 69 + 60714840 AATGAGACAGTACACAGTAA----TTTGCAGAG-TGCCTGTTGCCTAGCCAAGCCCTGGAAATAAGACGGGAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103365273 56 - 106955855 aatgagacagtacacagtaa----tttgcagag-tgcctgttgcctag-caagcactg------------gagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60668515 72 + 64156825 aacgagacagtacacagtaagcatttagcagag-tgcctgttgcctag-caagcgcttgaaatgagatgggagT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55809695 72 + 59248254 aacgagacagtacacagtaagcatttagcagag-tgcctgttgcctag-caagcgcttgaaatgagatgggagT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47916745 72 + 51301725 AACGAGACAGTACACAGTAAGCATTTAGCAGAG-TGCCTGTTGCCTAG-CAAGCGCTTGAAATGAGATGGGAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620403 72 + 50890351 aacgagacagtacaccgtaagcatttagcagag-tgcctgttgcctag-cgagcgcttgaaatgagatgggagT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20086732 59 - 122678785 AATGAAACAA--------------CTAACAGAGTTGCCTAATGCATAG-GGAGCTCCCAAACTATGATGGTagt i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 36131 661 + 138250 I a score=155781.000000 s hg38.chr19_GL949747v2_alt 673425 55 + 729520 aagtaaatagctTAAGCTTATACTGTG--CTGTAAGCTTGTATTGCCACATACAATT s panTro4.chr19 59939744 55 + 63644993 aagtaaatagCTTAAGCTTATACTGTG--CTGTAAGCTTGTATTGCCACATACAATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56885352 55 + 60714840 AAGTAAATAGCTTAAGCTTATACTGTG--CTGTAAGCTTGTATTGCCACATACAATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103365329 55 - 106955855 aaataaatagctTAAGCTTATACTGTG--CTGTAAGCTTGTATTGCCACATACAATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60668587 55 + 64156825 ACGTAAACAGCTTAAGCTTATACCATG--CCGTAAGCTTGCATTGCCACATACAATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55809767 55 + 59248254 ACGTAAACAGCTGAAGCTTATACCATG--CCGTAAGCTTGCATTGCCACATACAATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47916817 55 + 51301725 AAGTAAACAGCTTAAGCTTATACCATG--CCGTAAGCTTGCATTGCCACATACAATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620475 55 + 50890351 AAGTAAACAGCTTGAGCTTATACCATG--CCGTAAGCTTGCATTGCCACATACAATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 36792 55 + 138250 aaaaaaaGAGCTTAAGCTTAGGCTGTG--CCGGAAGCTTACACTGCAGCATGCGATC i calJac3.chr22_GL285922_random I 661 C 0 s canFam3.chr1 20086791 57 - 122678785 aacaaaatagcttaatattttaatgcaatttttaaaccaaaattaatgcaaataatt i canFam3.chr1 C 0 I 689 a score=247665.000000 s hg38.chr19_GL949747v2_alt 673480 92 + 729520 GTTACGTTGTAAATGTGGCTGACAGtgctagcttccgggtgccttccaaacttatgatgtatatcagttcagtgaatcct--cagagacctatg s panTro4.chr19 59939799 92 + 63644993 GTTACATTGTAAATGTGGCTGACAGTGCCAGCTTCCGGGTGCCttccaaactcatgatatatatcagttcggtgaatcct--cagagacctatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56885407 92 + 60714840 GTTACATTGTAAACGTGGCTGACAGTGCCAGCTTCCGGGTGCCttccaaactcatgatgtatatcagttcagtgaatcct--cagagacctatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103365384 92 - 106955855 GTTACGTTGTTAACGTGGCTGACAGTGCCAGCTTCCTGGTGCCttccaaactcatgatgtgtatcagttcagtgaaccct--cagagacctatt i nomLeu3.chr10 C 0 I 323 s rheMac3.chr19 60668642 91 + 64156825 GTTACGTTGGAAACGTGGCTGACGGTGCCAGC-TCTGGGTGCCttccgaactcatgacgcacatcagttcagtgaatcct--cagagacctgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55809822 91 + 59248254 GTTACGTTGGAAACGTGGCTGACGGTGCCAGC-TCTGGGTGCCttccgaactcatgacgcacatcagttcagtgaatcct--cagagacctgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47916872 91 + 51301725 GTTACGTTGGAAACGTGGCTGACGGTGCCAGC-TCTGGGTGCCTTCCAAACTCATGACGTACATCAGTTCAGTGAATCCT--CAGAGACCTGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620530 91 + 50890351 GTTACGTTGGAAACGTGGCTGACGGTGCCAGC-TCCGGGTGCCttccgaactcatgccgtacatcagttcagtgaatcct--cagagacctgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 36847 94 + 138250 ATTCCATCGCAAACGTGGGTGAAAGTGCCAGCTTccaggtgccttccaaactcaggacatgtatcaattcagtgaatcctcacagatacctaca i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I a score=121802.000000 s hg38.chr19_GL949747v2_alt 673572 40 + 729520 gagtcctcactcttaatgtccctattttataaatgaaact s panTro4.chr19 59939891 40 + 63644993 gagtcctcactgttaatgtccctattttataaatgaaact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56885499 40 + 60714840 gagtcttcactcttaatgtccctattttataaatgaaact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103365799 40 - 106955855 gagtcctcactcttaaagtccctattttataaatgaaact i nomLeu3.chr10 I 323 C 0 s rheMac3.chr19 60668733 40 + 64156825 gagtcctcactcttaatgtccctattttataaatgaaact i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55809913 40 + 59248254 gagtcctcactcttaacgtccctattttataaatgaaact i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47916963 40 + 51301725 GAATCCTCACTCTTAacatccctattttataaatgaaact i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620621 40 + 50890351 gagtcctcactcttaacgtccctattttataaatgaaact i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 36941 40 + 138250 aggtcatcactattaatgtccctattttataaatgaAACT i calJac3.chr22_GL285922_random C 0 I 3745 e canFam3.chr1 20086848 689 - 122678785 I a score=530837.000000 s hg38.chr19_GL949747v2_alt 673612 247 + 729520 aaggcacatggcattaaataatttgtccaactctaggtaacaatactgcagtgtacagctgaaatttgctaagagggtagattataagtattctcacacacaa---aaaagttaactgtgtcaggtgatgtatgttaattagcttgctag-tagtaactgtctcacagtggattcgtatatcaaaacatcaacttgtacaccttggatatattccatttttgtttttcaattatacctcaacaaagctgga s panTro4.chr19 59939931 243 + 63644993 aaggcacatggcattaaataatttgtccaactctaggtaacaatactgcagtgtgcagctgaaatttgctaagagggtagattataagtgttctcacacacaa---aaaagttaactgtgtcaggtgatgtatgttaattagcttgctag-tggtaactgtctcacagtggattcgtatatcaaaacatcaacttctacaccttggatatattccatt----tttttcaattatacctcaacaaagctgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56885539 248 + 60714840 aaggcacatggcattaaataatttgtccaactctgggtaacaatactgcagtgtacacctgaaatttgctaagagggtagattataagtgttctcacacacaa---aaaagttaactgtgtgaggtgatgtatgctaattagcttgctagttggtggttgtctcacagtggattcgtatatcaaaacatcaacttgtatgccttggatatattccatttttgtttttcaattatacctcaacaaaactgga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103365839 247 - 106955855 aaggcacatggcattaaataatttgtccaactctaggtaacaatactgcagtgtacacctgaaatttgctaagagggtagattataagtgttctcacacacaa---aaaagttaactgtgtgaggtgatgtgtgttaattagcttgctag-tggtaactgtctcaccgtggattcgtatatcaaaacatcaacttgtacaccttggatatattccatttttatttttcaattatatctcaacaaagctgga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60668773 240 + 64156825 aaggcacatggcgtt----aatttgtccaaCCCtaggtaacaagacagcagtgcgtacttgaaatttgctaagagggtagattataagtgttctcacactcaaaagaaaagttaactgtgcgaggtgatgtatgttaattagcttgctcg-tggtaactgtctcacagtggatacgtacatcaaaaca------tgtatgccttggatatgttccatttttgtttttcaattataactcaacaaacctgga i rheMac3.chr19 C 0 I 325 s macFas5.chr19 55809953 240 + 59248254 aaggcacatggcgtt----aatttgtccaaCCCtaggtaacaagacagcagtgcgtacttgaaatttgctaagagggtagattataagtgttctcacactcaaaagaaaagttaactgtgcaaggtgatgtatgttaattagcttgctcg-tggtaactatctcacagtgggtacgtacatcaaaaca------tgtacgccttggatatgttccatttttgtttttcaattataactcaacaaacctgga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47917003 244 + 51301725 aAGGCATATGGCGTTAAAGAATTTGTCCAACCCCAGGTAACAAGACGGCAGTGCGTACTTGgaatttgctaagagggtagattATAAGTGTTCTCACACGCAAAAGAAAAGTTAACTGTGCGAGGTGatgtatgttaattagcttgctCG-TGGTAACTATCTCACAGTGGATACGTACATCAAAACA------TGTACGCCTTGGATatgttccatttttgtttttcaattataACTCAACAAacctgga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620661 244 + 50890351 aaggcacatggcgttaaagaatttgtccaaCCCtaggtaacaagacagcagtgcgtacttgaaatttgctaagagggtagatcataagtgttctcacacgcaaaagaaaagttaactgtgcgaggtaatgtatgttaattagcttgctcg-tggtaactatctcacagtggatacgtacatcaaaaca------tgtacgtcttggatatgttccatttttgtttttcaattataactcaacaaacctgga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I a score=1265.000000 s hg38.chr19_GL949747v2_alt 673859 4 + 729520 cata s panTro4.chr19 59940174 4 + 63644993 cata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56885787 4 + 60714840 catt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103366086 4 - 106955855 catt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55810193 3 + 59248254 -aaa i macFas5.chr19 C 0 I 327 s papAnu2.chr19 47917247 3 + 51301725 -aaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620905 3 + 50890351 -aaa i chlSab2.chr6 C 0 I 1 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e rheMac3.chr19 60669013 325 + 64156825 I a score=1231361.000000 s hg38.chr19_GL949747v2_alt 673863 577 + 729520 ttttaatttaaaaataaataaaaaacttgtccaagatcataagtggcagagttgaaatctgcactcacagagtttgattccagggtctccgctcctaaacacgaacctacactACTCTGATGTGAGGTTGTTGTCATAGACCGGTGTGGTGATGCATGCCTGCACACAGGAGTCAGAAAAACAAAGGTTGAGgctgggtgcggcggctcacaccggtcatcccagcactttgggaggccaaggtgggaggatcgcttgagcccaggaa-----------------ggcgaggctgcagtgagctatgatcactgtacactagcctgggtgacagagtgagaccttgtctc-aaaaaaagacagagagagaaAGCAAAAGAAAGGAAGTAAGGAAGATAAAAATATAAGCTGCCTAATAATTATGGCATTCACTCAACAAGAAGAAaaagaaa---gaaagaggaaggaagggaggg----agggaggaa--------ggaaggaaggaaATATATAAGCTGCCTGATAACTGTAACATTCACTCAGCAATATTTTCTCTTAATTTTCACTTAAGCAACTATTATGTGTCTGTCTGTAttctttttttgtt s panTro4.chr19 59940178 576 + 63644993 ttttaatttaaaaataaataaaaaacttgtccaagatcataagtggcagagttgaaatctgcactcacggagtttgattccagggtctccactcctaaacacgaacctacactACTCTGATGTGAGGGTGTTGTCATAGACTGGTGTGGTGATGCATGCCTGCACACAGGAGTCAGAAAAACAAAGGTTGAGgctgggtgcggcggctcacaccagtcatcccagcactttgggaggccaaggtgggaggatcacttgagcccaggaa-----------------ggcgaggctgtagtgagccatgatcactgtacactagcctgggtgacagagtgagaccttgtctc-aaaaaaagac----agagaaagcaaaagaaaGGAAGTAAGGAAAATAAAAATATAAGCTGCCTGATAATTATGGCATTCACTCAACAAGAAGAAAAAGAAA---Gaggaaggaagggagggagggaggaaggaaggaa--------ggaaggaaggaaATATATAAGC-GCCTGATAACTGTAACATTCACTCAGCAATATTTTCTCTTAATTTTCACTTAAGCAACTATTATGTGTCTGTCCGTATTCtttttttgtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56885791 567 + 60714840 ttttaatttaaaaataaataaataacttgtccaagatcataagtggcagagttgcaatctgcactcacggagtttgattccagggtctccactcgtaaacacaaacctacactgCTCTGATGTGAGGGTATTGTCATCGTCCAGTGTGGTGATGCACGTCTGCACACAGGAGTC-GGAAAACAAAGGTTGAGgctgggtgcggcggctcgcaccggtcatcccagcactttgggaggccgaggtgggaggatcgcttgagcctaggaa-----------------ggcgaggctgcagtgagccatgatcactgtacaccagcgtgggtgacagagtgagaccttgtctc-aaaaaaagac--agagagaaaGCAAAAGAAAGGAAGTAAGG-AGAGAAAAATATAAGCTGCTTGATAATTATGGCATTCACTCAACAAGAAGAAAAAGAAG---GAGAAAG------aggaagga----agggaggga--------ggaaggaaagaaATATATAAGCTGCCTGATAATTGTAACATTCACTCAGCAATATTTTCTCTTAATTTTCACTTAAGCAACTATTATGTGTCTGTCTATATTCTttttttgtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103366090 569 - 106955855 tttaaatttaaaaataaataaaaaacttgtccaagatcgtaagtggcagagttgaaatctgcactcacagagtttgattccagggtctccactcctaaacacgaacctacactACTCTGATGTGAGGGGATTGTCATAGACCGGTGTGGTGATGCATGCCTGCACACAGGAGTcagaaaaacaaaggttgaggctgggtgcggcggctcacaccggtcatcccagcactttgggaggccaaggtgggaggatcgcttgatcctaggaa-----------------ggcgaggctgcagtgagccatgatcactgtacactagcctcggtgacagagtgagaccttatctc-aaaaaaagac----agagaaagcaaaagaaaGGAAGTAAGGAAGAGAAAAATATAAGCTGCCTGAAAATTATGGCATTCACTCAAC---AAGAAaaagaaa---gaaagaggaagggagagaggg----aggaaggaa--------ggaaggaaggaaATATATAAGCTGCCTGATAACTGTAACATTCACTCAGCAATATTTTCTCTTAATTTTCACTTAAGCAACTATTATGTGTCTGTCTGTATT-Tttttttgtt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60669338 577 + 64156825 ttttaatttaaaaataaataaataacttgtccaagatcataaggggcggagctgaaatttgcactcacagagtttgattctagggtctccactcctcagcacgaacctacactACTCTGATGTGAGGGTATTGTCGTAGTCCGGTGCGGTGATGCATGCCTGCACCCAGGAGTCAGT-AGACAAAGGTTGAGgccaggggcggcggctcacaccggtcatcccagcactttgggaggccaatgtgggaggattgcttgagcctaggaannnnnnnnnnnnnnnnn----------------gccatgatcactgtactccagcctgggtgacagagtgagaccttgtctcaaaaaaaagacaaagagagaAACCAAAAGAAAGGAAGTAAGGAAGAGAAAAATATAAACTGCCTGATAATTATGGCATTCACTCAACAAGAAgaaaaaagagaggaaggaaggaagggagagaggg----aggaagggagggtggaaggaaggaaggaaggaTATAAGCTGCCTGATAATCGTAACATTCACTCAGCA------------AATTTTCTCTTAGGCAACTATTAAGTGTCTGTCTGTAttctttttttgtt i rheMac3.chr19 I 325 C 0 s macFas5.chr19 55810523 573 + 59248254 TTTTAATTTAAAAATAAAtaaataacttgtccaagatcataaggggcggagctgaaatttgcactcacagagtttgattctagggtctccactcctcagcacgaacctacactACTCTGATGTGAGGGTATTGTCGTAGTCCGGTGTGGTGATGCATGCCTGCACCCAGGAGTCAGTaagacaaaggttgaggccaggtgcggcggctcacaccggtcatcccagcactttgggaggccaatgtgggaggattgcttgagcctaggaa-----------------gtcgaggctacagtgagccatgatcactgtactccagcctgggtgacagagtgagaccttgtctcaaaaaaaagacaaagagagaaaacaaaagaAAGGAAGTAAGGAAGAGAAAAATATAAACTGCCTGATAATTATGGCATTCACTCAACAAgaagaaaaaagag----aggaaggaagggagagaggg----aggaagagagggtggaaggaaggaaggaaggaTATAAGCTGCCTGATAATCGTAACATTCACTCAGCA------------AATTTTCTCTTAGGCAACTATTAAGTGTCTCTCTGTATTCTTTTTTTGtt i macFas5.chr19 I 327 C 0 s papAnu2.chr19 47917250 565 + 51301725 ttttaaattaaaaataaataaataacttgtccaagatcataaGGGGCAGAGCTGAAATTTGCACTCACGGAGTTTGATTCTAGGGTCTCCACTCCTCAGCACGAACCTACACTACTCTGACGTGAAGGTATT---GTAGTccggtgtggtgatgcatgctcGCACACAGGAGTCAGTAAGATAAAGGttgaggccgggtgcggcggctcacaccagtcatcccagcactttgggaggccaatgtgggaggactgcttgagcctaggaa-----------------gtcgaggctgcagtgagccatgatcactgtactctagcctgggtgacagagtgagaccttgtctc-agaaaaagacaaagagagaaaacaaaagaaaggaagtaaggaagagaaaaatataagctGCCTGATAATTTTGGCATTCactcaacaagaagaaaaaagag----aggaaggaagggagagaggg----aggaagagagggt----ggaaggaaggaaggatataaGCTGCCTGATAATTGTAACATTCACTCAGGA------------AATTTTCTCTTAAGCAACTATTAAGTGTctgtctgtattctttttttgtt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620909 576 + 50890351 TTTTAATTTAAAAATAAAtaaataacttgtccaagatcataaggggcagagctgaaatttgcactcacggagtttgattctagggtctccactcctcaacacaaacctacactACTCTGACATGAGGGTATTGTCATAGTCCAGTGTGGTGATGCATGCCTGCACCCAGGAGTCAGTAAGACAAAGGTTGAGgccgggtgcagcggctcacaccagtcatcccagcactttgggaggccaatgtgggaggattgcttgagcctaggaa-----------------gtcgaggctgcagtgagccatgatcactatactccagcctgggtgacagagtgagaccttgtctc-aaaaaaagaccaagagagaaaaC----GAAAGGAAGTAAGGAAGAGAAAAATATAAACTGCCTGATAATTATGGCATTCACTCAGTAAGAAGAAAAAAAAA---Gaggaaggaagggagagaggg----aggaagagagggt----ggaaggaaggaaggaTATAAGCTGCCTGATAATTGTAACATTCACTCAGCAA-ATTGTCTCTTAATTTTCTCTTAAGCAACTATTATGTGTCTGTCTGTAttctttttttgtt i chlSab2.chr6 I 1 I 23 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I a score=5010.000000 s hg38.chr19_GL949747v2_alt 674440 17 + 729520 gtttcatttgttttgtt s panTro4.chr19 59940754 6 + 63644993 gtttta----------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56886358 17 + 60714840 gtttcgtttgttttgtt i ponAbe2.chr19 C 0 T 3941 s nomLeu3.chr10 103366659 10 - 106955855 gtttcgtttg------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60669915 13 + 64156825 gttttgttttgtt---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55811096 13 + 59248254 gttttgttttgtt---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47917815 13 + 51301725 gttttgttttgtt---- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621485 23 + 50890351 I a score=11914.000000 s hg38.chr19_GL949747v2_alt 674457 18 + 729520 ttgttttgttttgtttt-g s panTro4.chr19 59940760 14 + 63644993 ----tttgttttgtttt-g i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103366669 14 - 106955855 ----tttgttttgtttt-g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60669928 18 + 64156825 tggttctgttttgttttg- i rheMac3.chr19 C 0 I 670 s macFas5.chr19 55811109 17 + 59248254 tggttctgttttgtttt-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47917828 17 + 51301725 tggttctgttttgtttt-- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e ponAbe2.chr19 56886375 3941 + 60714840 T e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621485 23 + 50890351 I a score=27800.000000 s hg38.chr19_GL949747v2_alt 674475 38 + 729520 agacggagtctcgctctgtcacccaggctggagtgcaa s panTro4.chr19 59940774 38 + 63644993 agacggagtctcgctctgtcgcccaggctggagtgcaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103366683 38 - 106955855 agatggagtctcgctctgtcggccaggctggagtgcaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811126 31 + 59248254 -------gtttcgctctgtcgcccaggctggggtgcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47917845 31 + 51301725 -------gtttcgctctgtcgcccaggctggagtgcaa i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e ponAbe2.chr19 56886375 3941 + 60714840 T e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621485 23 + 50890351 I e rheMac3.chr19 60669946 670 + 64156825 I a score=168.000000 s hg38.chr19_GL949747v2_alt 674513 7 + 729520 tggcata s panTro4.chr19 59940812 4 + 63644993 t---ata i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103366721 7 - 106955855 tggcaca i nomLeu3.chr10 C 0 I 267 e canFam3.chr1 20086848 689 - 122678785 I e ponAbe2.chr19 56886375 3941 + 60714840 T e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621485 23 + 50890351 I e papAnu2.chr19 47917876 0 + 51301725 C e macFas5.chr19 55811157 0 + 59248254 C e rheMac3.chr19 60669946 670 + 64156825 I a score=162.000000 s hg38.chr19_GL949747v2_alt 674520 70 + 729520 tatatatatatatatatatatatatatatatatatatatatatatatatatatatatttttttttttttt s panTro4.chr19 59940816 22 + 63644993 tatatatatatatatatatata------------------------------------------------ i panTro4.chr19 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e ponAbe2.chr19 56886375 3941 + 60714840 T e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e nomLeu3.chr10 103366728 267 - 106955855 I e chlSab2.chr6 47621485 23 + 50890351 I e papAnu2.chr19 47917876 0 + 51301725 C e macFas5.chr19 55811157 0 + 59248254 C e rheMac3.chr19 60669946 670 + 64156825 I a score=182.000000 s hg38.chr19_GL949747v2_alt 674590 2 + 729520 tt s nomLeu3.chr10 103366995 2 - 106955855 tt i nomLeu3.chr10 I 267 C 0 e canFam3.chr1 20086848 689 - 122678785 I e ponAbe2.chr19 56886375 3941 + 60714840 T e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621485 23 + 50890351 I e papAnu2.chr19 47917876 0 + 51301725 C e macFas5.chr19 55811157 0 + 59248254 C e rheMac3.chr19 60669946 670 + 64156825 I e panTro4.chr19 59940838 0 + 63644993 C a score=13821.000000 s hg38.chr19_GL949747v2_alt 674592 32 + 729520 ttttttttttttttttgggaaacagaatctca s panTro4.chr19 59940838 29 + 63644993 ---tttttttttttttgggaaacagagtctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56882434 32 + 60714840 ttttttgttttttttttggagacagagtctca i ponAbe2.chr19 T 3941 C 0 s nomLeu3.chr10 103366997 32 - 106955855 tttttttttttttttttggagacagagtctaa i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621485 23 + 50890351 I e papAnu2.chr19 47917876 0 + 51301725 C e macFas5.chr19 55811157 0 + 59248254 C e rheMac3.chr19 60669946 670 + 64156825 I a score=22690.000000 s hg38.chr19_GL949747v2_alt 674624 25 + 729520 ctctgttgcccaggctggagtgcag s panTro4.chr19 59940867 25 + 63644993 ctctgttgcccaggctggagtgcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56882466 25 + 60714840 ctctgttgcccaggctggagtgcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367029 25 - 106955855 ctctgttgcccaggctggagtgcag i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47621508 25 + 50890351 ctctgtcgcccaggctggggtgcaa i chlSab2.chr6 I 23 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e papAnu2.chr19 47917876 0 + 51301725 C e macFas5.chr19 55811157 0 + 59248254 C e rheMac3.chr19 60669946 670 + 64156825 I a score=186777.000000 s hg38.chr19_GL949747v2_alt 674649 119 + 729520 tggcatgatcccagctcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcatgcaccaccatgcccagttaa-ttttgtatg s panTro4.chr19 59940892 119 + 63644993 tggcgtgatcccagctcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcatgcaccaccatgcccagttaa-ttttgtatG i panTro4.chr19 C 0 M 469 s ponAbe2.chr19 56882491 119 + 60714840 tggcgtgatcccagctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggactacaggcatgtgccaccatgcccagttaa-ttttgtatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367054 119 - 106955855 tggcgtgatcccagctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcatgcgccaccatgccccgttaa-ttttgtatg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811157 118 + 59248254 tggcatgatctcggctcactgcaatctccgcctcccaggttgaagccattcttctgcctcagcctagagagtagctgggattacaggcactcgccatcatgcccagctaatttttgta-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47917876 118 + 51301725 tggcatgatctcggctcactgcaacctccgcctcccaggttgaagcaattcttctgcctcagcctagagagcagctgggattacaggcactcgccatcatgcccagctaatttttgta-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47621533 118 + 50890351 tggcatgatctcggctcactgcaatctccgcctcccaggttgaagcaattcttctgcctcagcctagagagtagctgggattacaggcactcgccatcatgccgggctaatttttgta-- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e rheMac3.chr19 60669946 670 + 64156825 I a score=126884.000000 s hg38.chr19_GL949747v2_alt 674768 113 + 729520 tttagtagagacagggtttcaccatgttagccaggctgatctcgaactcctgacctcaggtgatccgtccacctcggcctcccaaagtgctggcattacaggcgtgagccacc s ponAbe2.chr19 56882610 113 + 60714840 tttagtagagacagggtttcaccacgttggccgggctgatctcgaactcccgacctcaggtgatccgcccacctcggcctcccaaagtgctggcattacaggcgtgagccacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367173 110 - 106955855 tttagtagagacagggtttcaccatgttagccaggctgatctcgaactcctgacctcaggtgatccgctcacctcggcctccca---tgctgggattacaggcgtgagccacc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811275 107 + 59248254 ttttgtaga------gtttcaccatgttggccagtctggtcttgaacctctgacctcaggtgatccacccgccttggcctcccaaagtgctgggattacaggcatgaaccacc i macFas5.chr19 C 0 I 49 s papAnu2.chr19 47917994 107 + 51301725 ttttgtaga------gtttcaccatgttggccagtctggtcttgaacctctgacctcaggtgatccacccgccttggcctcccaaagtgctgggattacaggcatgaaccacc i papAnu2.chr19 C 0 I 33 s chlSab2.chr6 47621651 107 + 50890351 ttttgtaga------gtttcaccatgttggccagtctggtcttgaacctctgacctcaggtgatccacccaccttggcctcccaaagtgctgggattacaggcatgagccacc i chlSab2.chr6 C 0 I 44 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e rheMac3.chr19 60669946 670 + 64156825 I e panTro4.chr19 59941011 469 + 63644993 M a score=2560.000000 s hg38.chr19_GL949747v2_alt 674881 10 + 729520 gtgcccgacc s ponAbe2.chr19 56882723 10 + 60714840 gcgcctggcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367283 10 - 106955855 gcgcccggcc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811431 10 + 59248254 aaaTCCCATC i macFas5.chr19 I 49 C 0 s papAnu2.chr19 47918134 10 + 51301725 aaatcccatc i papAnu2.chr19 I 33 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621758 44 + 50890351 I e rheMac3.chr19 60669946 670 + 64156825 I e panTro4.chr19 59941011 469 + 63644993 M a score=55725.000000 s hg38.chr19_GL949747v2_alt 674891 45 + 729520 AGGAATTAAAAATAGACAACCACCACCAAGAT--AAAAAAAGGTATA s ponAbe2.chr19 56882733 45 + 60714840 AGGAATTAAAAATAGACAACCACCACCAAGAT--AAATAAAGGTATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367293 45 - 106955855 AGGAATTAGAAATAGACAACCACCACCAAGAT--AAATAAAGGTATA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811441 47 + 59248254 AGGAATTAAAAATAGACAACCATCACCAAGGTAAAAATAAAGGTATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47918144 47 + 51301725 agGAATTAAAAATAGACAACCATCACCAAGGTAAAAATAAAGGTATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47621802 45 + 50890351 AGGAATTAAAAATAGACAACCATCACCAAGGT--AAATAAAGGTATA i chlSab2.chr6 I 44 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e rheMac3.chr19 60669946 670 + 64156825 I e panTro4.chr19 59941011 469 + 63644993 M a score=410147.000000 s hg38.chr19_GL949747v2_alt 674936 280 + 729520 CTTCACATACCAGATAgtgaggagggccactttgactagggtggtgggggatatacttagcgagaagagagtatttgagtctgaccctgaaagaagtaatgaggcagccaggctggtccattctagtagcagagaggaggccagtgatgctgtggaggggagtgaggcagggaagaggggagggagGCAGGATTTATAACGCGGAATAGA-CCACAGTGCAGCTggccaggaattagggtggcgtgagtgaggcactctcctgggatgtaaaatttaaTTA s panTro4.chr19 59941489 271 + 63644993 CTTCACATACCAGATAGTG-GGAGG-CCACTT-GACTAGG-TGGTGGGG-ATATACTTAGTGAGA-GAGAGCATTTGAGTCTGACCC-GAAAGAAGTA-TGAGGCAGCCAGGCTGGTCCACTCTAGTAGCAGAGAGGAGGCCGGTGATGCTGTGGAGGGGAGTGAGGCAGGGAAGAGGGGAGGGAGGCAGTATT-ACAACGCGGAATAGA-CCACAGTGCAGCTggccaggaattagggtggcgtgagtgaggcactctcctgggatgtaaaacttaaTTA i panTro4.chr19 M 469 C 0 s ponAbe2.chr19 56882778 260 + 60714840 CTTCACATACCAGATAgtgaggagggccactttgactagggtggtgggggatatacttagtgagaagagagcatttgagtctgaccccaaaagaagtaatgaggcagccaggcTGGCCCATTCTAGTAGCAGAGAGGAGGCCGGTGATGCTGTGGAGGGGAGAGAGGCAGG--------------------ATTTACAATGCGGAATAGA-ACACAGTGCAGCTggccaggaattagggtggcgtgagtgaggcactctcctgggatgtaaaatttaaTTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367338 281 - 106955855 CTTCACATACCAGATAgtgaggagggccactttgactagggtggtgggggatatacttagtgagaagacagcatttgggtctgaccccgaaagaagtaatgaggcagccaggcTGGTCCATTCTAGTAGCAGAGAGGAGGCGGGTGATGCTGTggaggagagtgaggcagggaagaggggagggaggcaggATTTACAACGCGGAATAGACCCACAGTGCAGCTggccaggaattagggtagcgtgagtgaggcactctcctgggatgtaaaatttaaTTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811488 257 + 59248254 CTTGACATACCAGATAGTGAGGAGGACCATTTTGACTAGGGTGGTGGGGTAAATACTTAATAAGAAGATGGCATTTGAGTCTGACCCCAAAAGAAGTAATGAGGCGGCCAGGCTGGTCCATCCTAGCAGCAGAGAG-----------------------GAGTGAGGGAGGAAAGAGGGGAGGTAGGCAGAATTTACAACGCGGAATAGA-CCACAGTGCAGCgggccgggaattagggtggcatgagtgaggcactctcctgggatgtaaaatgtaaTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47918191 257 + 51301725 CTTGACATACCAGATAGTGAGGAGGACCATTTTGACTAGGGTGGTGGGGTAAATACTTAATAAGAAGATGGCATTTGAGTCTGACCCCAAAAGAAGTAATGAGGCGGCCAGGCTGGTCCATCCTAGCAGCAGAGAG-----------------------GagtgagggaggaaagaggggaggTAGGCAGAATTTACAACGCGGAATAGA-CCACAGTGCAGCGGGCCAGGAATTAGGCTGGCATGAGTGAGGCACTCTCCTGGGatgtaaaatgtaatta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47621847 257 + 50890351 CTTGACATACAAGATAgtgaggagggccattttgactagggtgatggggtaaatacttaataagaagatggcatttgagtctgactccaaaagaagtaatgaagcggccaggcTGGTCCATCCTAGCAGCAGAGAG-----------------------GAGTGAGGGAGGAAAGAGGGGAGGTAGGCAGAGTTTACAACGCAGAAGAGA-CCACAGTGCAGCgggccaggaattagggtggcatgagtgaggcactctcctgggatgtaaaatgtaaTTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e rheMac3.chr19 60669946 670 + 64156825 I a score=168891.000000 s hg38.chr19_GL949747v2_alt 675216 101 + 729520 TTCCCAAACAATTAACATATTTGAAAAAATTATTGAAAATTTGAAGAGTAGGTCGTTAAAACTCAC--ATTATTCT--GTTTGAA-----TACTTTATTCCCCT--------GAAAGA---------------- s panTro4.chr19 59941760 101 + 63644993 TTCCCAAACAATTAACATATTTGAAAAAATTATTGAAAATTTGACGAGTAGGTCGTTAAAACTCAC--ATTATTCT--GTTTGAA-----TACTTTATTCCCCT--------GGAAGA---------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56883038 105 + 60714840 TTCCCAAAC----AACATATTTGAAAAAATTATTGAAAATTTGAAGAGTAGATCATTAAAACTCAC--ATTATTCT--GTTTGAA-----TACTTTATTTCTTCCCCCGAAAGAAAGA---------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367619 105 - 106955855 TTCCCAAACAATTAACATATTTGAAAAAATTATTGAAAATTTGAAGAGTAGGTCATTAAAACTCAC--ATTATTCT--GTTTCAA-----TACTTTATTTATTCGCCT----GAAAGA---------------- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811745 100 + 59248254 TTCCCAAACAATTAACATATTTGAAAAAATGTTTGCAAATTTGAAGAGTAGGTCATTAAAACTCAC--ATTATTCT--ATTTGAA-----TAC-TTATTCCCGT--------GAAAGA---------------- i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47918448 100 + 51301725 ttcCCAAACAattaacatatttgaaaaaatgtttgcaaatttgAAGAGTAGGTCATTAAAACTCAC--ATTATTCT--ATTTGAA-----TAC-TTATTCCCgt--------gaaaga---------------- i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 47622104 105 + 50890351 TTCCCAAACAATTAACATATTTGAAAAAATGTTTGAAAATTTGAAGAGTAGGTCATTAAAACTCAC--ATTATTCT--ATTTGAATACTTTAC-TTATTCCCCT--------GAAAGA---------------- i chlSab2.chr6 C 0 I 446 s canFam3.chr1 20087537 115 - 122678785 TTTCCAGGCTATTAAC--AGTTGAAAAAA---TTGAAAAACTTTAAAGTAGGCTATTAAAACTCACaaattattttaagtttaaa-----tat-ttatttatac--------aaaaaaaatactttttaaagaa i canFam3.chr1 I 689 C 0 e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e rheMac3.chr19 60669946 670 + 64156825 I a score=20163.000000 s hg38.chr19_GL949747v2_alt 675317 14 + 729520 TTTATTAGAATTTT s panTro4.chr19 59941861 14 + 63644993 TTTATTAGAATTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56883143 14 + 60714840 TTTATCATGATTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367724 14 - 106955855 TTTATTAGGATTTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811849 14 + 59248254 TTTATTATGAtttt i macFas5.chr19 I 4 I 155 s papAnu2.chr19 47918552 14 + 51301725 tttattatgatttt i papAnu2.chr19 I 4 I 1288 s canFam3.chr1 20087652 14 - 122678785 tttattatCCTTTT i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47622209 446 + 50890351 I e rheMac3.chr19 60669946 670 + 64156825 I a score=15046.000000 s hg38.chr19_GL949747v2_alt 675331 27 + 729520 -ACATTCTAGGCTTTTGTGGATGCAAGC s panTro4.chr19 59941875 27 + 63644993 -ACATTTTAGGCTTTTGTGGATGCAAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56883157 27 + 60714840 -ACATTCTAGGCTTTTGTGGTTGCAAGC i ponAbe2.chr19 C 0 I 7304 s nomLeu3.chr10 103367738 27 - 106955855 -ACATTCTAGGCTTTTGTGGATGCAAGC i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 20087666 27 - 122678785 AATTCTCCTGACTTTAG-GGAAACAAAT i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47622209 446 + 50890351 I e papAnu2.chr19 47918566 1288 + 51301725 I e macFas5.chr19 55811863 155 + 59248254 I e rheMac3.chr19 60669946 670 + 64156825 I a score=24636.000000 s hg38.chr19_GL949747v2_alt 675358 65 + 729520 GCATCAGTGCTATTTCCAAAACCTACTTCTAGAAAA----TAACCATTTAAAAGTGCACTA-------ACTGGgtg s panTro4.chr19 59941902 65 + 63644993 GCATCAGTGATATTTCCAAAACCTACTTTTAGAAAA----TAACCATTTAAAAGTGCACTA-------ACTGGgtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103367765 69 - 106955855 CCATCAGTGATAGTTCCAAAACCTACTTCTAGAAAATAATTAACCATTTAAAAGTGCACTA-------ACTGGgtg i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 20087693 70 - 122678785 TCATCAATGATATTTTCAAAATCTG--TTCAGAAAA----TTACCATTTAAAAATGCTTTAGAgggacactgggtg i canFam3.chr1 C 0 I 698 e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47622209 446 + 50890351 I e papAnu2.chr19 47918566 1288 + 51301725 I e macFas5.chr19 55811863 155 + 59248254 I e rheMac3.chr19 60669946 670 + 64156825 I a score=156861.000000 s hg38.chr19_GL949747v2_alt 675423 622 + 729520 cacctatagtcccagctactagggaggaccacttgagcccagggatttgaggctaaagtgagctatgatcatgcctgtgaatacagcgagtgtactaaagcctgggcaacatagtaagacctcttctctt----------tttttttttttcccaagacggagtcttgctctgtcgcccaggctggactgcagtggtgcaatctcggctcaccgcctcccaggtttaagcgattctcctgcctcagcctccggagtagctgggattacaggagtgcgccaccgcgcccagctaattattattatt--------ttttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgaccttaagtgatccacccacctcagcctcccaaagtactgggattacaggcgtgagccgccgcgcccggcccaacctcttctcttaaaaaaaataaataa----------ataagaaaagaAATTAGAATATTTGCACCAATCaagagtctaaggagacataaatactaaatgcactgtggggccctggacggggtctgggaacagaaataggatattagtggaaagactggtgaaattcaaatagcctggagtttacttgatataatatagttgtgtctat s panTro4.chr19 59941967 635 + 63644993 cacctatagtcccagctactagggaggaccacttgagcccagggggttgaggctaaagtgagctatgatcatgcctgtgaatatagcgagtgtactaaagcctgggcaacatagtaagacctcttctcttctc-----ttttttttttttttccaagacggagtcttgctctgtcgcccaggctggactgcagtggtgcaatctcggctcactgcctcccaggtttaagcgattctcctgcctcagcctccggagtagctgggattacaggagtgcgccaccgcgcccagctaattattattattatttttttttttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgaccttaagtgatccacccacctcagcctcccaaattactgggattacaggcatgagccgccgtgcccggcccaacctcttctcttaaaaaaaataaataa----------ataagaaaagaaaTTAGAATATTTGCACCAATCaagagtctaaggagacataaatactaaatgcactgtggggccctggacggggtctgggaacagaaataggatattagtggaaagactggtgaaattcaaatagcctggagtttacttgatataacatagttgtgtctat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103367834 628 - 106955855 cacctgtagtcccagctactagggaggaccacttaagcccaggggtttgaggctaaagtgagctatgatcgtgcctgtgaatgt--------------agcctgggcaacatagtaagacctcttctcttctcttttttttttttttttttcccaagacggagtcttgctctgtcgcccaggctggagtgcagtggtgcagtctcggctcactgtctcccaggtttaagcgattctcctgcctcagcctccggagtagctgggattacagacgtgcgccaccgtgcccagctaattatttttatt-------ttttttaagtagagacggggtttcaccatgttggccaggctggtctcgaactcctgaccttaagtgatccacccgcctcggcctcccaaagtactgggattacaggcgtgagccactgcgcctggcccaacctcttctctaaaaaaaaaaaaaaaaaaaaagaaagaaaagaaaagatattagaatattcgcaccaatcaagagtctaaggagacataaatactgaatgcactgt-gggccctggacggggtctgggaacagaaataggatattagtggaaagactggtgaaattcaaatagcctggagtttacttgatataacatagttgtatctat i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20087763 698 - 122678785 I e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47622209 446 + 50890351 I e papAnu2.chr19 47918566 1288 + 51301725 I e macFas5.chr19 55811863 155 + 59248254 I e rheMac3.chr19 60669946 670 + 64156825 I a score=73429.000000 s hg38.chr19_GL949747v2_alt 676045 244 + 729520 ggttagttt----tttgtttgtttt--ttgatacagggtctcactctgtcacccaggctggagtgcagtggcgtgatcacagctccctgcagcctcggcctccctggctcaagcgatcctcctgcctcagcctcctgagtagctgggactataggtgtatgccaccatgccccactaatttttaatttt----------gtttaaagat--gaggtctcactatgttgcccaggctg-------------------------------gtcttgaactcctgagctcaagcaa s panTro4.chr19 59942602 244 + 63644993 ggttagttt----tttgtttgtttt--ttgatacagggtctcactctgtcacccaggctggagtgcagtggcatgatcacagctccctgcagcctcggcctccctggctcaagtgatcctcctgcctcagcctcctgagtagctgggactataggcgtatgccaccatgccccactaatttttaatttt----------gtttaaagat--gaggtctcactatgttgcccaggctg-------------------------------gtcttgaactcctgagctcaagcaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103368462 233 - 106955855 ggttagttttttgtttgtttgtttt--ttgatacagggtctcactctgtcacc--------------gaggcatgatcacagttccctgcagcctcggcctccctggctcaagcgatcctcctgcctcagcctcctgagtagctgggactataggtgtatgccaccatgccccactaatttttaatttt-----------tttgaagat--gaggtctcactatgttgcccaggctg-------------------------------gtcttgaactccggagctcaagcaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55812018 256 + 59248254 ggctaattt----ttttgtatttttagtagagacagggtttcactgtgttagccaggatg-------------------------------gtctccatctcttggcctt--gtgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgagccaccgcgtctggccTATGGTTAGttttttgtttgtttgtttgttgatacaggatcttactctgtcacccaagctggagtgcagaggcacgatcacagctctctgtagcctcagcctccctggctcaagtgg i macFas5.chr19 I 155 C 0 e canFam3.chr1 20087763 698 - 122678785 I e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47622209 446 + 50890351 I e papAnu2.chr19 47918566 1288 + 51301725 I e rheMac3.chr19 60669946 670 + 64156825 I a score=21961.000000 s hg38.chr19_GL949747v2_alt 676289 24 + 729520 tcctcccgcctcagcctcccaaag s panTro4.chr19 59942846 24 + 63644993 tcctcccgcctcagcctcccaaag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103368695 24 - 106955855 tcctcccacctcagcctcccaaag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55812274 24 + 59248254 tcctcctgcctcagcctcccaaag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47622655 24 + 50890351 tcctcctgcctcagcctcccaaag i chlSab2.chr6 I 446 C 0 e canFam3.chr1 20087763 698 - 122678785 I e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e papAnu2.chr19 47918566 1288 + 51301725 I e rheMac3.chr19 60669946 670 + 64156825 I a score=418039.000000 s hg38.chr19_GL949747v2_alt 676313 327 + 729520 tgctgggattacaggtgtaaaccactgggaccagtgctacgtttattttttggttgtaacaaatgtaagatgttaacatgaggggatcctgggtgaaatatttccattaatattatctttggaacttttctgtcagtctaaaaattactccaaaacaaagtt-----ttaaaaaGAATCCCGAgccaagcacggtggcccgtgaccgtagtccctgctactcatgaggctgaggcaggaggattgctcaaggcaaggagctccaggctgcagtgagctatgactgct----------cctatgaacagccactgcactccggcctgggcagtgtagcaagac s panTro4.chr19 59942870 327 + 63644993 tgctgggattacaggtgtaaaccactgggaccagtgctacgtttattttttggttgtaacaaatgtaagatgttaacatgaggggatcctgggtgaaatatttccattaatattatctttggaacttttctgtcagtctaaaaattattccaaaacaaagtt-----ttaaaaaGAATCCCGAgccaagcatggtggcctgtgactgtagtccctgctactcatgaggctgaggcaggaggattgcttaaggcaaggagctccaggctgcagtgagctatgactgct----------ccagtgaacagccactgcactgcagcctgggcagcgtagcaagat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103368719 327 - 106955855 tgctgggattacaggtgtaaaccactgggaccagtgctatgtttattttttagttgtaacaaatgtaagacgttaacatgaggggatcccgggtgaaatatttccattaatattatctttgcaacttttctgtcagtctaaaaattattccaaaacaCACTT-----TTAAAAAGAATCCCGAgccaagcatggtggcctgtgactgtagtccctgctactcgtgaggctgaggcaggaggattgctgaaggcaaggagctccaggttgcagtgagctatgattgct----------cctgtgaacagccactgcactccagcctgggcaatgtagcaagac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60670616 342 + 64156825 tgctgggattacaggtgtgagccacTGGGACCAGTGCTGtgtttattttttagttgtaacaaatgtaagatgttaacatgaggggatcctgggtgaaatattttcattaatattatctttgcaacttttctgtcagtctaaaaatgattccaaaaccaagtttttaattaaaaaGAATCCTGAgccaagcatggtggcctgtgactgtagtccctgctactcatgaggctgaggcaggaggattgcttaaggcaaggagttccaggctgccgtgagctatgattgctctgcagtgagctggtgaacagccactgcgctccagcctggaccacatagcaagag i rheMac3.chr19 I 670 C 0 s macFas5.chr19 55812298 332 + 59248254 tgctgggattacaggtgtgagccacTGGGACCAGTGCTatgtttattttttagttgtaacaaatgtaagatgttaacatgaggggatcctgggtgaaatattttcattaatattatctttgcaacttttctgtcagtctaaaaatgattccaaaaccaagtttttaattaaaaaGAATCCTGAgccaagcatggtggcctgtgactgtagtccctgctactcatgaggctgaggcaggaggattgcttaaggcaaggagttccaggctgccgtgagctatgattgct----------cctgtgaacagccactgcactccagcctggaccacatagcaagag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47622679 332 + 50890351 tgctgggattacaggtgtgagccacTGGGACCAGTGCTatgtttattttttagttgtaacaaatgtaagatgttaacatgaggggatcctgggtgaaacattttcattaatattatctttgcaacttttctgtcagtctaaaaatgattccaaaaccaagtttttaattaaaaaGAATCCTGAgccaagcatggtggcctgtgactgtagtccctgctactcatgaggctgaggcaggaggattggttaaggcaaggagttccaggctgccgtgagctatgattgct----------cctgtgaacagccactgcactccagcctgggccacatagcaagag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20087763 698 - 122678785 I e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e papAnu2.chr19 47918566 1288 + 51301725 I a score=1004241.000000 s hg38.chr19_GL949747v2_alt 676640 620 + 729520 cccatcgctAATTTTTTTAAGTGCATTAAAACACAGATAAAGGGTTGCCTGtttttcgttttggcacagactctggtatgacttgacacaggcactggctgattctgcctttatttgaaattctgg-ttttttt--cattgtggatgtttttgcaatttattttgatttttttaaaaattgcatgaaaatgttattcacagccagatgcagtggctcacgcctgaaatcccaacactttgggaagccaaggtggaaggatagcttgagcccacaggagttcgagaccagcctgagcaacatagcgagaccctatctctctctcttttgtattttaatgccttttgtgaaaactgtcaagagaccccatctctat-aaaaacataaaaaatgagctgggcgtggtggtgcacacctgtaatcctagctacttggagggctgaggcgggagaatcgcttgagccctgg---aggtggaggctgcagtgagccaagatcgcgccactgctctccaccctgggtgacgcagcaagaccctgtgtccaaaaaac-----aaaatattattcacattgatccataaatgtcgtggcaccaccacccgctaggccagtgcctcgtttgcctc------------accctaa s panTro4.chr19 59943197 619 + 63644993 cccatcGCTAATTTTTTTAAGTGCATTAAAACA--GATAAAGGGGCGCCTGtttttcgttttggcacagactctggtatgacttggcacagacactggctgattctgcctttatttgaaattctgg-ttttttt-tcatcgtggatgtttttgcactttattttgattttttttaaaattgcatgaaaatgttattcacagccagatgcagtggctcacgcctgtaatcccaacactttcggaagccaaggtggaaggattgcttgagcccacaggagttcgagaccagcctgagcaacatagcgagaccctatctctctgtcttttgtattttaatgccttttgtgaaaactgtcaagagaccccatctctgt-aaaaacataaaaaatgagctgggcgtggtggtgcacacctgtaatcccagctacttggagggccgaggcaggagaatcgcttgagccctgg---aggtggaggctgcagtgagccaagatcgcgccactgcactccaccctgggtgacgcagcaagaccctgtgtccaaaaaat-----aaaatattattcacattgatccataaatgtcgtggcaccaccacccgctaggccagtgcctcgtttgcctc------------accctaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103369046 607 - 106955855 cccatctctaaTTTTTTTAAGTGTGTTAAAACACAGATAAAGGGGTGCCTGtttttcgttttggcacagcttctggtatgacttggcacaggcactggctgattctgcctttatttgaaattctga-ttttttt-ttatcgtggatgtttttgcaatttatt----ttttttt---aattgcattaaaatgttattcacagacagatgcagtggctcacgcctgttatcccaacactttgggaggccaaggtggaaggattgcttgagcc--caggagttcgagaccagcctgagcaacacagcgagaccc--tctctctctcttttgtattttaatgccttttgtgaaaactgtcaggagaccccacctctac-aaaaacataaaaagtgagctgggcatggtggtgcacacctgtagtcccagctacttggagggctgaggcaggagaatcgcttgagcctggg---aggcggaggctgcagtgagccaagatcgcgccactgcactccaccctgggtgatgcagcaagaccctgtgtccaaaaaat-----aaaatattattcacattgatccataaat---gtggcaccaccacccgctaggccagtgcctcgtttgcctc------------accctaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60670958 611 + 64156825 cccatctctAATTTTTTTAAGTGCATTAAAACACAGATAAAGGAGTGCCTGTCTTTCGTT----------------------ttggcacaggcactgcctgattctgcctttatgtgaaattctga-tttttttttcatcgtggatg-gtttgcgatttcttttgattttttaaaaaattgcattaaaatgttattctcacccagatgcagtggctcaggcctgtaaacccaacactttgggaggccaaagtggaaggattgcttgagcc--caggagtttgagaccagtctaagcaacatagcgagaccc--tctctctctcttt--tattttaatgccttttgtgaaaactgtcaagagaccccatctccacaaaaaaaattaaaaatgagctgggcatggtggtgcacacctgtagtcccagctactcggagggctgaggcaggagaatcacttgaacttagg---aggtggaggctgcagtgagccaagatcgcaccaccgcactccagcgtgggtgacgcagcaaggccctgtgtccaaaaaacaaaacaaaatgttattcacattgatccataaatgttgtggcaccaccacccgctaggccagtgcctggtttgcctcgccctaattccggccctAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55812630 611 + 59248254 cccatctctAATTTTTTTAAGTGCATTAAAACACAGATAAAGGAGTGCCTGTCTTTCGTT----------------------ttggcacaggcactgcctgattctgcctttatgtgaaattctga-tttttttttcatcgtggatg-gtttgcgatttcttttgattttttaaaaaattgcattaaaatgttattcacacccagatgcagtggctcaggcctgtaaacccaacactttgggaggccaaagtggaaggattgcttgagcc--caggagtttgagaccagtctaagcaacatagcgagaccc--tctctctctcttt--tattttaatgccttttgtgaaaactgtcaagagaccccatctccacaaaaaaaattaaaaatgagctgggcatggtggtgcacacctgtagtcccagctactcggagggctgaggcaggagaatcacttgaacttagg---aggtggaggctgcagtgagccaagatcgcaccaccgcactccagcgtgggtgacgcagcaaggccctgtgtccaaaaaacaaaacaaaatattattcacattgatccataaatgttgtggcaccaccacccgctaggccagtgcctggtttgcctcgccctaattccggccctAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47919854 612 + 51301725 cccgtctctaatttttttaagtgcattAAAACACAGATAAAGGAGTGCCTGTCTTTCGTT----------------------TTGGCACAGGCACTGCCTGATTCTGCCTTTATgtgaaattctgattttttttttcatcatggaTG-GTTTGcgatttcttttgattttttaaaaaattgcattaaaatgttattcacacccagatgcagtggctcaggcctgtaatcccaacactttgggaggccaaagtggaaggattgcttgagcc--caggagtttgagaccagtctaatcaacatagcaagaccc--tctctctctcttt--tattttaatgccTTTTGTGAAAACTGTcaagagaccccatctccacaaaaaaaattaaaaatgagctgggcatggtggtgcacacctgtagtcccagctactcggagggctgaggcaggagaatcacttgaacttagg---aggtggaggctgcagtgagccaagatcgcaccaccgcactccagcgtgggtgacgcAGCAAGGCCCTgtgtccaaaaaacaaaacaaaatattattcacaTTGATCCATAAATGTTGTGGCACCACCACCCGCTAGGCCAGTGCCTGGTTTGCCTTGCCCTAATTCTGGCCCTAA i papAnu2.chr19 I 1288 C 0 s chlSab2.chr6 47623011 632 + 50890351 cccatctctAATTTTTTTAAGTGCATTAAAACACAGATAAAGGGGTGCCTGtttttcgttttagcacaggctctggtatgacttggcacaggcactgcctgattctgcctttatttgaaattctga-tttttttttcatcgtggatg-gtttgccatttattttgattttttttaaaattgcattaaaatgttattcacacccagatgcagtggctcaggcctgtaatcccaacactttgggaggccaaagtgggaggattgcttgagcc--caggagtttgag---agcctaagcaacatagcgagaccc--tctctctctcttt--tattttaatgccttttgtgaaaactgtcaagagaccccatctccacaaaaaaaattaaaaatgagctgggcatggtggtgcacacctgtagtcccagctacttggagggctgaggcaggagaatcacttgaacttaggataaggtggaggctgcagtgagccaagatcgcaccaccgcactccagcgtgggtgacgcagcaaggccctgtgtccaaaaaat-atataaaatattattcacattgatccataaatgttgtggcaccaccacccgctaggccagtgcctggtttgcctcgtcctaattccggccctAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20087763 698 - 122678785 I e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I a score=16400.000000 s hg38.chr19_GL949747v2_alt 677260 8 + 729520 tccctgcc s panTro4.chr19 59943816 8 + 63644993 cccctgcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103369653 8 - 106955855 tccctgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60671569 8 + 64156825 TCCCTGCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55813241 8 + 59248254 TCCCTGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47920466 8 + 51301725 TCCCTGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47623643 8 + 50890351 TCCCTGCT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20088461 8 - 122678785 TCGCTGTC i canFam3.chr1 I 698 C 0 e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I a score=755687.000000 s hg38.chr19_GL949747v2_alt 677268 264 + 729520 ctCAATGTCCCCCGTATTTGTGTCCTGAA---CGGAGGAC-CACGCAGTCCCAGGCTCCGATCCCCCTTCCTTTACCCGTGGCAACGAGCTCCAGCTGGTCGCTGGGCAGGGACCAGAGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCAGCCAGACTTCTCTTCATGGCCGGGATGAAGAGGACTGCCTGATCCTGGTACCTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGTCCCTGGCACCGGAGGG s panTro4.chr19 59943824 264 + 63644993 ctCAATGTCCCCCATATTTGTGTCCTGAA---TGGAGGAC-CGCGCAGTCCCAGGCTCCGATCCCCCTTCCTTTACCGGTGGCAATGAGCTCCAGCTGGTCGCTGGGCAGGGACCAGAGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCAGCCAGACTTCTCTTCATGGCCGGGATGAAGAGGACTGCCTGATCCTGGTACCTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGTCCCTGGCACCGGAGGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103369661 264 - 106955855 ctCAATGTCCCCCGTATTTGTGTCCTGAA---TGGAGGAC-CACGCAGTCCCAGGCTCTGATCCCCCTTCCTTTACCGGTGGCAACGAGCTCCAGCTGGTCGCTGGGCAGGGACCAGAGGCTTCTGTTCTGGTAGGAGCAGCGGTAGCGTCCAGCCAGATGTGTCTTCATGGCCGGGATGAAGAGGACCGCCTGATCCTGGTAGCTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGTCCCTGGCACCGGAGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60671577 264 + 64156825 CTCAGTGTCCCCCATGTTTGTGCCCTGAA---CGGAGGAC-CAGGCAGTCCCAGGCTCCGATCCCCCTTCCTTTACCGGTGGCAACGAGCTCCAGCTGGTCGCTGGGCGGGGACCAGAGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCGGCCAGATGTCTCTTCATGGCCGGGATGAAGAGGACCGCCTGATCCTGGTACCTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGCCCCTGGCACCGGAGGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55813249 264 + 59248254 CTCAGTGTCCCCCATGTTTGTGCCCTGAA---CGGAGGAC-CAGGCAGTCCCAGGCTCCGATCCCCCTTCCTTTACCGGTGGCAACGAGCTCCAGCTGGTCGCTGGGCGGGGACCAGAGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCGGCCAGATGTCTCTTCATGGCCGGGATGAAGAGGACCGCCTGATCCTGGTACCTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGCCCCTGGCACCGGAGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47920474 264 + 51301725 CTCAGTGTCCCCCATGTTTGTGCCCTGAA---CGGAGGAC-CAGGCAGTCCCAGGCTCCGATCCCCCTTCCTTTACCGGTGGCAACGAGCTCCAGCTGGTCGCTGGGCGGGGACCAGAGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCGGCCAGACGTTTCTTCATGGCCGGGATGAAGAGCACCGCCTGATCCTGGTAACTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGTCCCTGGCACCGGAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47623651 264 + 50890351 CTCAATGTCCCCCATATTTGTGCCCTGAA---CGGAGGAC-CAGGCAGTCCCAGGCTCCAATCCCCCTTCCTTTACCGGTGGCAACGAGCTCCAGCTGGTCGCTGGGCAGGGACCAGAGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCGGCCAGACTTCTCTTCATGGCCGGGATGAAGAGGACCGCCTGGTCCTGGTATCTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGCCCCTGGCACCGGAGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 40726 264 + 138250 ccTAACATCCCCCATATTCGTGTCCCGAA---CGGAGGCC-CATACAGTCCCAGGCTACAATCCCCTGTCCTTTACCAGTGGCAATGAGCTCCAGCTGGTCGCTGGGCGGGGACCAGCGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCAGCGTCACTTTGCTTCATGGCCGGGATGAGGAGGACCGCCTGATCCCGGTAGCTGTTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACACCCGGAGGTCCCTGGCACCGGAGGG i calJac3.chr22_GL285922_random I 3745 C 0 s canFam3.chr1 20088469 265 - 122678785 ATCATCATCCCCCTCTTCACCCTCCTGGAGCCCTGAGGCCACAGGTGGCCCC---CTCCCATGCCCTTCCAGGTACCAGTGGCCACCAGCTCCAGCTGGTTGCTGGGGGGAGACCAGAGGGTCCCGTTCTGGTAGGAGCAGCGGTAACACCCAGCGAAACTTTCCTCCATGGTCTTGATGAAGAGGACAGGCCGATCCTGGTATTTCCGGGACCTCAGCTTCTCCAGGCGGTACAAGTCCACGTCTGGAGGCCCCTGGCAGCGGATGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56883184 7304 + 60714840 I a score=1529597.000000 s hg38.chr19_GL949747v2_alt 677532 483 + 729520 TCACTGGCTTCT-CCAGGGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTGGGGAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACC-CCGCCTGG--ACCCCGCTGCTCC--CGCGCTGGCGGATCCCG----------CAGGAGGGAAGGGGTCT-GGGGAAGGACTCACCACTCTGCGCTGG---CACACGCCCCAGACACAGCCCTGAGGAAAGAAGAAAGGGACCAGATGCCAGGACTCGCTTTTATGGACATTCCTGCCTGCTGGGCGCGGTGATAAGACATTTGCATGCATATGCTTTACTCTGTCCTAA----TAATTTCTTCAAAAGACACACAGGAATGTAATTtaagtg---agagaaaccggtcagaaaaagccacatagtttatgaggtcatttacatgaaatatccagaataggtaaatcta-taggagatggagaagaaagcagatccatggctg--------ggggtggt-gggagag-gaggGC s panTro4.chr19 59944088 483 + 63644993 TCACTGGCTTCT-CCAGCGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTGGGGAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACC-CCGCCAGG--GCCCCGCTGCCCC--CGCGCTGGCGGATCCCG----------CAGGAGGGAAGGGGTCT-GGGGAAGGACTCACCACTCTGCGCTGG---CACACGCCCCAGACACAGCCCTGAGGAAAGAAGAAAGGGACCAGATGCCAGGACTCGCTTTTATGGACATTCCTGCCTGCTGGGCGCAGTGATAAGACATTTGCATGCATATGCTTTACTCTGTCCTAA----TTATTTCTTCAAAAGACACACAGGAATGTAATTtaagtg---agagaaaccggtcagaaaaagccacatagtttatgaggtcatttacatgaaatatccagaataggtaaatcta-taggagatggagaagaaagcagatccatggctg--------ggggtggt-gggagag-gagggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56890488 482 + 60714840 TCACTGGCTTCTCCCAGGGGCACCA-GGAGCTGGGCAGAG-CTGGAGGGAGGGCTTGGGGAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACC-CCACCTGG--GCCCCGCTGCCCC--CGCGCTGGCGGATCCCG----------CAGGAGGGAAGGGGTCT-GGGGAAGGACTCACCACTTTGTGCTGG---CACATGCCCCAGACACAGCCCTGAGGAAAGAAGAAAGGGACCAGATGCCAGGACTCGCTTTTATGGACATTCGTGCCTGCTGGTCGTGGTGATAAGACATTTGCGTGCATATGCTTTACTCTGTCCTAA----TTATTTCTTCaaaagacacacaggaatgtaatttaagtg---agagaagccagtcagaaaaagccatgtagtttatgaggtcatttacatgaaatatccagaataggtaaatcta-taggagacggagaagaaaacagatccatggctg--------gcggtggt-gggagag-gagggt i ponAbe2.chr19 I 7304 C 0 s nomLeu3.chr10 103369925 483 - 106955855 TCACTGGCTTCT-CCAGGGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTGGGGAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACC-CTGCCTGG--GCCCCACTGCCGC--CACGCTGGCGGATCCCT----------CAGGAGGGAAGGGGTCT-GGGGAAGGACTCACCACTCTGCGCTGG---CACACGCCCCAGACATAGCCCTGAGGAAAGAAGAAAGGGACCAGATGCCAGGACTCGCTTTTATGGACATTCCTGCCTACTGGACACGGTGATAAGACATTTGCATGCATGTGCTTTACTCTGTCCTAA----TTATTTCTTCaaaagacacacaggaatgtaatttaagtg---ggagaagccagtcagaaaaagccacatagtttatgaggtcatttacatgaaatatccagaataggtaaatcta-taggagacagagaagaaaacagatccatggctg--------ggggtggt-ggaagag-gagggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60671841 490 + 64156825 TCACTGGCTTCT-CCAGGGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTAGGCAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACG-CCGCCTGG--GCCCCGCTGCCCTGGCACGCTGGCGGATCCCG----------CAGGAGGGAAGGGGTCTGGGGGAAGGACTCACCTCTCTGCGCTGG---CACATGCCCCAGACACAGCCCTGAGGAAAGAAGAAAGGGACCAGATGCCAGGACGCGCTCGTATGGACATTCCCGCCTGCTGGGCGCGGTGATAAGACATTTGCACGCATATGCTTTATTCTGTCCTAATTATTTATTTCTTCAGAAGATACATGTGCATGTAATTtaagtg---agagaagccagtcagaaaaagccacatagtctatgaggtcgtttacatgaaatatccagaataggtaaatcta-tagaaggaggagaagaaaacagatccacggctg--------ggggaggg-gggagag-gagggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55813513 490 + 59248254 TCACTGGCTTCT-CCAGGGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTAGGCAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACG-CCGCCTGG--GCCCCGCTGCCCTGGCACGCTGGCGGATCCCG----------CAGGAGGGAAGGGGTCTGGGGGAAGGACTCACCTCTCTGCGCTGG---CACATGCCCCAGACACAGCCCTGAGGAAAGAAGAAAGGGACCAGATACCAGGACGCGCTCGTAGGGACATTCCCGCCTGCTGGGCGCGGTGATAAGACATTTGCACGCATATGCTTTATTCTGTCCTAATTATTTATTTCTTCAGAAGATACATGTGCATGTAATTtaagtg---agagaagccagtcagaaaaagccacatagtctatgaggtcgtttacatgaaatatccagaataggtaaatcta-tagaaggaggagaagaaaacagatccacggctg--------ggggaggg-gggagag-gagggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47920738 490 + 51301725 TCACTGGCTTCT-CCAGGGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTAGGCAGTGGGCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACG-CCGCCTGG--GCCCCGCTGCCCTGGCACGCTGGCGGATCCCG----------CAGGAGGGAAGGGGTCTGGGGGAAGGACTCACCTCTCTGCGCTGG---CACATGCCCCAGACACAGCcctgaggaaagaagaaagggaccAGATGCCAGGACGCGCTTGTATGGACATTCCCGCCTGCTGGGCGCGGTGATAAGACATTTGCACGCATATGCTTTATTCTgtgctaattatttatttcttcaaaagatacatgtgcatgtaatttaagtg---agagaagccagtcaGAAAAAGCCACATAGCCTATGAGGTCGtttacatgaaatatccagaagAGGTAAATCTA-TAGAAGACGGAGAAGAAAACAGATccatggctg--------ggggtggg-gggagag-gaggGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47623915 490 + 50890351 TCACTGGCTTCT-CCAGGGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTAGGCAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACG-CCGCCTGG--GCCCCGCTGCCCTGGCACGCTGGCGGATCCCG----------CAGGAGGGAAGGGGCCTGGGGGAAGGACTCACCTCTCTGCGCTGG---CACATGCCCCAGACACAGCCCTGAGGAAAGAAGAAAGGGACCAGATGCCAGGACGCGCTTTTATGGACATTCCCGCCTGCTGGGCGCGGTGATAAGACATTTGCACGCATATGCTTTATTCTGTCCTAATTATTTATTTCTTCAAAAGATACATGTGCATGTAATTtaagtg---agagaagccagtcagaaaaagccacatcgtctatgaggtcatttacatgaaatctccagaataggtaaatctg-tagaagacggagaagaaaacagatccatggctg--------ggggtggt-gggagag-gagggc i chlSab2.chr6 C 0 I 615 s calJac3.chr22_GL285922_random 40990 468 + 138250 TCACTGGCTTCT-CCAGAGGCACCAGGGAGCTGGGCACAGCCTGCAGGGAGGGCTTGGGGAGTGGTCCTGGAAGAGGAGCAGAGCTGGGTCAGCCTCCCTGCAGACC-TCGCCTGG--AACCCACTTCCCCCACCTGCTGGTGGATCCCA----------CAGG--------------AGGGAAGGACTCACCGCTCTGTGCTTG---CACATGCCCCAGACACAGCCCTGAGGAGAGAAGAAAGAGACTAGAGGCCAGGACTGACTTTTATAAACACTGCTGCCTGCTGGGTGCGGCGACAAGACATTTGCATGCCTGTGCTTTATTCTCTCCTAATCACTTATTTCTTCAAAAGACAcacaggcatgtaatttgagtg---agagaagccagtcagaaaaagccacattgtttacgatgtcatttatatgaaatatccagaaggggtaaatcta-cagaagacag----------agacacatggctg--------ggggtggtcgggagagcgaggac i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20088734 490 - 122678785 TCACCTGCGTCT-TCAGGGGTGCTAGGGAGCTAGGCAGAGCCTGGAGGGAGGGCTTGGGCAGGGTACCTGGAAGGGAAGCAGAATT---------TCCAAACAGACCTCCTCCTGGGTGCTCCCCTCCTCC--CACCCTCCTGGCCCTTGTGCAGGCACCCAGATCCAGAGGATTCCAGGGGAAGGACTCACCAAGCTGTGCTTGCACCACCTGCCCCAGACACAGCCCTGAGCAGAGAAGAAAAGCACCACCTGCTAGCATCTCCTGGAGGCCACACTTCTGCACGCAGAGCA-GGTAATGCCACATCTTCAGGCAGTCACTTTCTTCTGTCCTCAT---TTGCTT-----AAGGACACACACTCacataatttgagtgccagaagaagccagccacagaaggccacatattgtatgattccatttatctgaaacatgctcactaggtaaatctgctcagacatggag--------agattagtggttgccagaaactggggggt-gggtggc-aggggc i canFam3.chr1 C 0 C 0 a score=4279.000000 s hg38.chr19_GL949747v2_alt 678015 3 + 729520 AAG s panTro4.chr19 59944571 3 + 63644993 gag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56890970 3 + 60714840 gag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370408 3 - 106955855 gag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60672331 3 + 64156825 gag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55814003 3 + 59248254 gag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47921228 3 + 51301725 GAG i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 41458 3 + 138250 gag i calJac3.chr22_GL285922_random C 0 I 1290 s canFam3.chr1 20089224 1 - 122678785 -a- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47624405 615 + 50890351 I a score=14793.000000 s hg38.chr19_GL949747v2_alt 678018 11 + 729520 GCATGGTGGCG s panTro4.chr19 59944574 11 + 63644993 gcgtggcggca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56890973 11 + 60714840 gcgtggcggcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370411 11 - 106955855 gcgtggcggca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60672334 11 + 64156825 acgtggcggcg i rheMac3.chr19 C 0 I 599 s macFas5.chr19 55814006 11 + 59248254 acgtggcggcg i macFas5.chr19 C 0 I 592 s papAnu2.chr19 47921231 11 + 51301725 ACGTGGCGGCG i papAnu2.chr19 C 0 I 577 s canFam3.chr1 20089225 5 - 122678785 ---ttgag--- i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I a score=17543.000000 s hg38.chr19_GL949747v2_alt 678029 32 + 729520 TACTGCTCTCTGTGGACTTG--TTCGTGTTAGAC s panTro4.chr19 59944585 32 + 63644993 tactgCTATCTGTGGACTCG--TTCGTGTTAGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56890984 32 + 60714840 tactgCTATCTGTGGATTCG--TTCGTGTTAGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370422 32 - 106955855 tactgCTATCTGTGGATTCA--TTCATGTTAGAC i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 20089230 34 - 122678785 gagtgattttcatgggcatgatttccttttagac i canFam3.chr1 C 0 I 2803 e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I a score=25291.000000 s hg38.chr19_GL949747v2_alt 678061 63 + 729520 ACGGTGGGCTCGTTCGTGTTAGACACGGTGGACTCGTTCGTGTTAGACACGGTGGGCTCGTTC s panTro4.chr19 59944617 62 + 63644993 ACGGTGGGCTCGTTCGCGTTGGACGCGGAGGGTTCGTTCGTGTTAGACGCGG-GGGCTCGTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56891016 63 + 60714840 ACTGTGGATTCGTTCGTGTTAGACACGGTGGATTCGTTCGTGTTAGACATTCTGGATTGGTTC i ponAbe2.chr19 C 0 T 84 s nomLeu3.chr10 103370454 63 - 106955855 ACTGTGGATTCGTTCGTGTTAGACGCCGTGGATTCGTTCGTGTTAGACGCCGTGGATTCGTTC i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I a score=300.000000 s hg38.chr19_GL949747v2_alt 678124 1 + 729520 G s panTro4.chr19 59944679 1 + 63644993 G i panTro4.chr19 C 0 T 84 s nomLeu3.chr10 103370517 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56891079 84 + 60714840 T e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I a score=8898.000000 s hg38.chr19_GL949747v2_alt 678125 170 + 729520 TGTTAGACACGGTGGGCTCGTTCGTGTTAGACACGGTGGACTCGTTCGTGTTGTGTTAGACACGGTGGACTCGTTCGTGTTAGACGCGGTGGACTCGTTCGTGTTAGACACGGTGGACTCGTTCGTGTTGTGTTAGACACGGTGGACTCGTTCGTGTTGTGTTAGACACG s nomLeu3.chr10 103370518 155 - 106955855 TGTTAGACGCCGTGGATTCGTTCGCGTTAGGCGCCGTGGATTCGTTC-----GCGTTAGGCGCCGTGGATTCGTTCGCGTTAGGCGCCGTGGATTCGTTCGCGTTAGGCGCCGTGGATTCGTTC-----GTGTTAGACGCCGTGGATTCGTTC-----GTGTTAGGCGCC i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56891079 84 + 60714840 T e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944680 84 + 63644993 T a score=33146.000000 s hg38.chr19_GL949747v2_alt 678295 73 + 729520 GTGGACTCGTTCGTGTTAGACACGGTGGGTTCGTTCGTGTTAGACACGGTGGGTTCGTTCGTGTTAGACGCGG s panTro4.chr19 59944596 73 + 63644993 GTGGACTCGTTCGTGTTAGACACGGTGGGCTCGTTCGCGTTGGACGCGGAGGGTTCGTTCGTGTTAGACGCGG i panTro4.chr19 T 84 M 773 s ponAbe2.chr19 56890995 73 + 60714840 GTGGATTCGTTCGTGTTAGACACTGTGGATTCGTTCGTGTTAGACACGGTGGATTCGTTCGTGTTAGACATTC i ponAbe2.chr19 T 84 C 0 s nomLeu3.chr10 103370673 73 - 106955855 GTGGATTCGTTCGTGTTAGGCGCCGTGGATTCGTTCGTGTTAGGCGCCGTGGATTCGTTCGTGTTAGACGCTG i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I a score=6150.000000 s hg38.chr19_GL949747v2_alt 678368 28 + 729520 TGGGTTCGTTCGTGTTAGACGCGGTGGA s ponAbe2.chr19 56891068 28 + 60714840 TGGATTGGTTCGTGTTAGACACTGTGGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370746 28 - 106955855 TGGATTCATTCGTGTTAGGCGCTGTGGA i nomLeu3.chr10 C 0 T 120 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=671.000000 s hg38.chr19_GL949747v2_alt 678396 12 + 729520 CTCCTTCGTGTT s ponAbe2.chr19 56891096 12 + 60714840 TTCGTTCGTGTT i ponAbe2.chr19 C 0 T 113 s nomLeu3.chr10 103370654 7 - 106955855 TTCGTTC----- i nomLeu3.chr10 T 120 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=677.000000 s hg38.chr19_GL949747v2_alt 678408 12 + 729520 GTGTTAGACACG s nomLeu3.chr10 103370661 12 - 106955855 GTGTTAGGCGCC i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56891108 113 + 60714840 T e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=25015.000000 s hg38.chr19_GL949747v2_alt 678420 118 + 729520 GTGGACTCGTTCGTGTTAGACACGGTGGACTCGTTCGTGTTAGACACGGTGGACTCGTTCGTGTTAGACACGGTGGACTCGTTCGTGTTGTGTTAGACACGGTGGACTCGTTCGTGTT s ponAbe2.chr19 56890995 113 + 60714840 GTGGATTCGTTCGTGTTAGACACTGTGGATTCGTTCGTGTTAGACACGGTGGATTCGTTCGTGTTAGACATTCTGGATTGGTTC-----GTGTTAGACACTGTGGATTCGTTCGTGTT i ponAbe2.chr19 T 113 T 29 s nomLeu3.chr10 103370673 113 - 106955855 GTGGATTCGTTCGTGTTAGGCGCCGTGGATTCGTTCGTGTTAGGCGCCGTGGATTCGTTCGTGTTAGACGCTGTGGATTCATTC-----GTGTTAGGCGCTGTGGATTCGTTCGTGTT i nomLeu3.chr10 C 0 T 101 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=0.000000 s hg38.chr19_GL949747v2_alt 678538 58 + 729520 GTGTTAGACACGGTGGGCTCGTTCGTGTTGTGTTAGACACGGTGGACTCGTTCGTGTT e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56891108 29 + 60714840 T e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e nomLeu3.chr10 103370786 101 - 106955855 T e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=6514.000000 s hg38.chr19_GL949747v2_alt 678596 106 + 729520 GTGTTAGACACGGTGGGCTCGTTCGTGTTAGACGCGGTGGGCTCGTTCGTGTTAGACGCGGTGGGCTCGTTCGTGTTGTGTTAGACACGGTGGGCTCGTTCGTGTT s nomLeu3.chr10 103370685 101 - 106955855 GTGTTAGGCGCCGTGGATTCGTTCGTGTTAGGCGCCGTGGATTCGTTCGTGTTAGACGCTGTGGATTCATTC-----GTGTTAGGCGCTGTGGATTCGTTCGTGTT i nomLeu3.chr10 T 101 T 12 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56891108 29 + 60714840 T e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=0.000000 s hg38.chr19_GL949747v2_alt 678702 29 + 729520 GTGTTAGACACGGTGGGCTCGTTTGTGTT e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56891108 29 + 60714840 T e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e nomLeu3.chr10 103370786 12 - 106955855 T e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=932.000000 s hg38.chr19_GL949747v2_alt 678731 12 + 729520 GTGTTAGACACG s ponAbe2.chr19 56891079 12 + 60714840 GTGTTAGACACT i ponAbe2.chr19 T 29 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e nomLeu3.chr10 103370786 12 - 106955855 T e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=600.000000 s hg38.chr19_GL949747v2_alt 678743 1 + 729520 G s ponAbe2.chr19 56891091 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55814609 1 + 59248254 g i macFas5.chr19 I 592 C 0 s papAnu2.chr19 47921819 1 + 51301725 G i papAnu2.chr19 I 577 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e nomLeu3.chr10 103370786 12 - 106955855 T e chlSab2.chr6 47624405 615 + 50890351 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=2241.000000 s hg38.chr19_GL949747v2_alt 678744 4 + 729520 TGGG s ponAbe2.chr19 56891092 4 + 60714840 TGGA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55814610 4 + 59248254 tgga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47921820 4 + 51301725 TGGA i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 42751 4 + 138250 TGTG i calJac3.chr22_GL285922_random I 1290 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e nomLeu3.chr10 103370786 12 - 106955855 T e chlSab2.chr6 47624405 615 + 50890351 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=2949.000000 s hg38.chr19_GL949747v2_alt 678748 4 + 729520 CTCG s ponAbe2.chr19 56891096 4 + 60714840 TTCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370774 4 - 106955855 TTCG i nomLeu3.chr10 T 12 C 0 s macFas5.chr19 55814614 4 + 59248254 ttcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47921824 4 + 51301725 TTCC i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 42755 4 + 138250 TTCA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e chlSab2.chr6 47624405 615 + 50890351 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=427215.000000 s hg38.chr19_GL949747v2_alt 678752 211 + 729520 TTCGTGTTAGACA-TTGCCCATTGACTTCCTCAGTGGATGTGAGGAATGGGACCTGAGACATTGCTGTCCCTTCGTTTCCTCCCTTCAGTCTCCCAATATTAAATAATATCCAA---GTACATTACAATAGTATGCAATTGTA-TAGACAAGTATTGTAAATACtattgcatattgtatattattgt----attttattgtctatgtaatatATGCGATA s ponAbe2.chr19 56891100 211 + 60714840 TTCGTGTTAGACA-TTGCCCATTGACTTCCTCAGTGGGTGTGAGGAATGGGACCTCAGACATTGCTGTTCCTTCGTTTCCTCCCTTCAGTCTCCCAATATTAAATAATATCCAA---GTGCATTACAATAGTATGCAATTGTA-TAGACAAGTATTGTAAATACTATTGCATATTGTATATTATTGT----ATTTTATTGTCTATGTAATATATGCGATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370778 211 - 106955855 TTCGTGTTAGACA-TTGCCCATTGACTTCCTCAGTGGATGTGAGGAATGGGACCTCAGACATTGCTGTTCCTTCGTTTCCTCCCTTCAGTCTCCCAATATTAAATAATATCCAA---GTGCATTCCAATAGTATGCAATTGTA-TACACAGGTATTGTAAATActattgcgtattgtatattattgt----attttattgtctatgtaatatatGCGATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60672944 212 + 64156825 ttcgtgttagacatttgcccgttgacttcctcagtggatgtgaggaATGGGACCTCAGATATTGCTGTCCCTTCGTTTCCTCCCTTCGGTCT-CCAATATGAAATAATATCCAA---GGGCATTCCAATAGTACGCAATTGTATTAGACAAGTATTGTAAATACTATTGCATATTGTATATTGTTGT----ATTTTATTGTATATGTAATACATGCAGTA i rheMac3.chr19 I 599 C 0 s macFas5.chr19 55814618 212 + 59248254 ttcgtgttagacatttgcctgttgacttcctcagtggatgtgaggaATGGGACCTCAGATATTGCTGTCCCTTCGTTTCCTCCCTTCGGGCT-CCAATATGAAATAATATCCAA---GGGCATTCCAATAGTACGCAattgtattagacaagtattgtaaatactattgcatattgtatattgttgt----attttattgtatatgtaATACATGCAGTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47921828 210 + 51301725 TTCATGTTAGACA-TTGCCCGTTGACTTCCTCAGTGGATGTGAGGAATGGGACCTCAGATATTGCTGTCCCTTCGTTTCCTCCCTTCGGTCT-CCAATATGAAATAATATCCAA---GGGCATTCCAATAGTATGCAATTGTA-TAGACAAGTATTGTAAATACTATTGCATATTGtatattgttgt----attttattgCATATGTAATACATGCAGTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47625020 202 + 50890351 TTCGTGTTAGACATTTGCCCGTTGATTTCCTCAGTGGATGTGAGGAATGGGACCTCAGATATTGCTGTCCCTTCGTTTCCTCCCTTCGGTCTCCCAATATGAAACAATATCCAA---GGGCATTCCAATAGTACACAATTGTA-TAGACAAGTATTGTAAATACTATTGCATATTGTATATTGTCAT--------------ATATGTAATATATGCAGTA i chlSab2.chr6 I 615 C 0 s calJac3.chr22_GL285922_random 42759 214 + 138250 TTAGAGTCAGGCA-CTGCACACTGCCGTCCTCAGTGGGTGTGAGGAGTGTGACCTCAGACATTGCCGTCCCTTCATCTCCTCCCTCC-GTCTCCCAGTATTAAACAGTATCCAGCACGTGCA---CAATGAGACGCGTTTGTG-TAGACAGTTATTGTGAATAGTATTGCATGTCGTATATCATGGTCTTTCTTTTATTGTACATGCAGTACATGCAGTA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e panTro4.chr19 59944669 773 + 63644993 M a score=76116.000000 s hg38.chr19_GL949747v2_alt 678963 27 + 729520 AAACCCCACACTAATGGGATGCATTGG s panTro4.chr19 59945453 27 + 63644993 AAACCCCACACTAATGGGATGCATTGG i panTro4.chr19 M 773 C 0 s ponAbe2.chr19 56891311 26 + 60714840 -AAACCCACACTAATGGGATGCATTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370989 27 - 106955855 AAACCCCACACTAATGGGACGCACTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60673156 27 + 64156825 AAACCCCACACTAATGGGATGCGCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55814830 27 + 59248254 AAACCCCACACTAATGGGATGCGTTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47922038 27 + 51301725 AAACCCCACACTAATGGGATGCATTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47625222 27 + 50890351 AAACCCCACACTAATGGGATGCATTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 42973 27 + 138250 GAACCCCACACTggccaggtgcggtgg i calJac3.chr22_GL285922_random C 0 I 1464 e canFam3.chr1 20089264 2803 - 122678785 I a score=591042.000000 s hg38.chr19_GL949747v2_alt 678990 258 + 729520 GCTCCAAGGATGGAGCAGGATGGAGCCTCAGCGTGTAAGTCAGGACGTCTCAGCATGTGCTGGCCATGGGTTTCCCGGTATTTACAACATTTGCTTGAATCAGTATTCCATGATTACATGATAGGATataatatatataata----atcgtttcaaatagcctgaaggaggatggggaaagttcccaacac--agaaaggatgcatgtttgagaagatgggtgtgctacttaccctgatctgattactatatgtatatacacat s panTro4.chr19 59945480 258 + 63644993 GCTCCAAGGATGGAGCAGGATGGAGCCTCAGCGTGTAAGTCAGGACGTCTCAGCATGTGCTGGCCATGGGTTTCCCGGTATTTACAACATTTGGTTGAATCagtattccatgattacatgataggatgtaatatatataata----atcgtttcaaatagcctgaaggaggatggggaaagttcccaacac--agaaaggatgcatgtttgagaagatgggtgtgctacttaccctgatctgattactatatgtatatacacat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56891337 264 + 60714840 GCTCCAAGGATGGAGCAGGATGGAGCCTCAGTGTGTAAGTCAGGACGTCTCAGCGTGTGCTGGCCATGGGTTTCCCGGTATTTACAACATTTGGTTGAATCAATATTCCATGattacatgataggatgtaatatatataataatatatcatttcaaatagtctgaaggaggatggtgaaagtttccaacacaaagaaaagatgcatgtttgagaagatgggtgtgctacttaccctgatctgatcactatatgtatatacacat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103371016 258 - 106955855 GCTCCGAGGATGGAGCAGGATGGCGCCTCAGTGTGTAAGTCAGGGCGTCTCAGCACGTGCTGGCCATGGGTTTCCCGGTATTTACAGCATTTGGTTGGATCAATATTCCAtgattacataatagaatgtaatatatataata----acagtttcgaatagcctgaaggaggatggtgaaaattcccaacac--agaaaggatgcatgtttgagaagatgggtgtgctacttaccctgatctgatcactatatgtatatacacat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60673183 264 + 64156825 GCTCCAGGGATGGAGCAGGATGGAGCCCCAGTGTGTAAGTCAGGTCATCTCAGCGTGTACTGGCCATGGGTTTCACAGTATTTACAACGTTTGGTTGAATCGATATTCCATgattacatggtaggatgtaatatatatgataatatatcgtttcaagtagcctgaaggaggatggtgaaggttcccaacacagagaaaggatgcatgtttgagaacatgggtgtgctgcttaccctgatctgatcgctatatgtatgtatacat i rheMac3.chr19 C 0 I 681 s macFas5.chr19 55814857 263 + 59248254 GCTCCAGGGATGGAGCAGGATGGAGCCCCAGTGTGTAAGTCAGGTCATCTCAGCGTGTACTGGCCATGGGTTTCACAGTATTTACAACGTTTGGTTGAATCGATATTCCGTgattacatggtaggatgtaatatatatgataatatatcgtttcaagtagcctgaaggaggatggtgaaggttcccaacacagagaaaggatgcatgtttgagaacatgggtgtgctgcttaccctgatctgatcgctatatgtatgtataca- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47922065 264 + 51301725 ACTGCAAGGATGGAGCAGGATGGAGCCCCAGTGTGTAAGTCAGGTCATCTCAGCGTGTACTGGCCATGGGTTTCACAGTATTTGCAACGTTTGGTTGAATCAATATTCCGTGATTACATGGTAGGATGTAATACATATGATAATATATCGTTTCAAGTAGCCTTAAGGAGGATGGTGAAAGTTCCCAACACAGAGAAAGGATGCATGTTTGAGAACATGGGTGTGCTgcttaccctgatctgatcactgtatgtatatacacat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47625249 264 + 50890351 GCTCCAGGGATGCAGCAGGATGGAGCCCCAGTGTGTAAGTCAGGTCATCTCAGCGTGTACTGGCCATGGGTTTTGCAGTATTTGCAACGTTTGGTTGAATCaatattctgtgattacatggtaggatgtaatacatatgatagtatatcgtttcaagtagccttaaggaggatggtgaaagttcccaacacagagaaaggatgcatgtttgagaacatgggtgtgctgcttaccctgatctaatcactgtatgtatatacacat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I a score=60907.000000 s hg38.chr19_GL949747v2_alt 679248 58 + 729520 atagtgcatatatgtaaacctacatctatacatacatgtgtatgtaCATATACACGTG s panTro4.chr19 59945738 58 + 63644993 atAGTGCAtatatgtaaacctacatctatacatacatgtgtatgtgcatatacatgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56891601 58 + 60714840 atagtgcatatatgtaaacatacatctatacgtacatgtatatgtgcatatacatgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103371274 54 - 106955855 atagtgcatatatgtaaacatacatcta----tacatgtatgtgtgcatATACCTGTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55815120 14 + 59248254 --------------------------tgtgtgtatatgca------------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47922329 58 + 51301725 atagtgcatatatgtaaacatacatctgtgcgtacatgtatatgtgcatatacatatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47625513 58 + 50890351 atagtgcatatatgtaaacatacatctgtgcatacatgtatatgtgcatatacatatg i chlSab2.chr6 C 0 I 54 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e rheMac3.chr19 60673447 681 + 64156825 I a score=29762.000000 s hg38.chr19_GL949747v2_alt 679306 58 + 729520 tgtacatacacacgtgtat----atgtatgtatatgtatatatgtatgcatgtgtgtgtgtg s panTro4.chr19 59945796 54 + 63644993 tgtacatacacatgtgtat----atgtatgtatacgtat----gtatgcatgtgtgtgtgta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56891659 62 + 60714840 tGtacatacatatacatataggcatatatgtatacatatgtgtatatgcatgtgtgtgtata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103371328 58 - 106955855 TGTACatacatatacatac----atgtgtatgtatacatgtgtatatgcatGTGTGTGTATG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47922387 56 + 51301725 --tggacatatgtgtgtgc----acatatgtatacgcacacatatatgtatatgtgtgtata i papAnu2.chr19 C 0 I 4 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e chlSab2.chr6 47625571 54 + 50890351 I e macFas5.chr19 55815134 0 + 59248254 C e rheMac3.chr19 60673447 681 + 64156825 I a score=249796.000000 s hg38.chr19_GL949747v2_alt 679364 158 + 729520 t----------gtgtgtgtgtgtgtatacatatgtatacaaatacatgtacatAAGCGATCCCCTCCTGgaattgcttgagcccaggaggtcaagtctgctgtgaggtaagattgcaccactggccgggcacggtggctcatgcctataatcccagcactttgggagg s panTro4.chr19 59945850 144 + 63644993 t------------------------atacatatgtataCAAATACATGTACATAAGCGATCCCCTCCTGgaattgcttgagcccaggaggtcaagtctgctgtgaggtaagattgcaccactggccgggtgcagtggctcatgcctataatcccagcactttgggagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56891721 144 + 60714840 t------------------------atatatatgtatacaaatacacgtatataAGCGATCCCCTCCTGggattgcttgagcccaggaggtcaaggctgctgtgaggtaagactgcaccacCagccaggcgcggtggctcatgcctataatcccagcactttgggagg i ponAbe2.chr19 C 0 I 2941 s nomLeu3.chr10 103371386 168 - 106955855 tatatatatatatatatatatatatatatatatGGATACAAATACATGTATATAAGCGATCCCCTCCTGggattgcttgaccccgggaggtcaagactgctgtgaggtaagattgcaccactggccgggcgcagtggctcatgcccataatcccagcactttgggagg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55815134 144 + 59248254 ------------------------tgtatatatgcatataaatacatatatataagtgaTCCCCTCCTGggattgcttgagcccaggaggtcaaggctgccgtgaggtaagattgcaccactggccaggcgcggtggctcacgcctataatcccagcactttgggagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47922447 158 + 51301725 ----------tgtgtatatgcatgtgtatgtatgtatataaatacatgtatataagtGATCCCCTCctgggattgcttgagcccaggaggtcaaggctgccgtgagataagattgcaccactggccgggcgcggtggctcatgcctataatcccagcactttgggagg i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 47625625 158 + 50890351 ----------tgtgtatatgcatgtatatatgtgtatataaacacatgtatataAGTGATCCCCTCCTGggattgcttgagcccaggaggtcaaggctgccgtgaggtaagattgcaccactggccaggcacggtggctcatgcctataatcccagcactttgggagg i chlSab2.chr6 I 54 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e rheMac3.chr19 60673447 681 + 64156825 I a score=411980.000000 s hg38.chr19_GL949747v2_alt 679522 235 + 729520 ccagggtgggcggatcacaaggtcaggagttcaagaccagcctggtcaacatggtgaaacaccatctctactaaaaataccagaaattagctgggcatggtggcacgtgcctgtaatcctagctactggggaggctgagtcaggagaatcacttgaacccgggaggcggaggttgcagtgagccaagatcacgccactacactccagcctgggcaacagagcaagactccatctc s panTro4.chr19 59945994 235 + 63644993 ccagggtgggcggatcacaaggtcaggagttcgagaccagcctggtcaacatggtgaaacaccatctctactaaaaatacaagaaattagctgggcatggtggcacgtgcctgtaatcctagctactggggaggctgagtcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccaagatcacgccactacactccagcctgggcaacagagcaagactccatctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894806 235 + 60714840 ccagggtgggcggatcacaaggtcaggagttcgagaccagcctggtcaacatggtgaaacaccatctctactaaaaatacaaaaaattagctgggcatggtggcacgtgcctgtaatcccagctactcgggaggctgagtcaggagaatcacttgaacccgggaggcagaggttgcagtgagccaagatcacgccactacactccagcctgggcaacagagcaagactccatctt i ponAbe2.chr19 I 2941 C 0 s nomLeu3.chr10 103371554 234 - 106955855 ccagggtgggtggatca-aaggtcaggagttcaagaccagcctggtcaacatggtgaaacaccatctctactaaaaatacaaaaaattagctgggcatggtggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaaccctgcaggtggaggttgcagtgagccgagatcgtaccactgcattccagccttggtgacagagcgagattccatctt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55815278 235 + 59248254 ccaaggtgggcagatcacaaggtcaggagttcgagaccagcctggtcaacatggtgaaacaccatctgtactaaaaatataaaaaattagctgggcatggtggcacgtacctataatcccagctacttgggaggctgagtcacgagaattgcttgaacccaggaggtggaggttgcagtgagctgagatcgcaccactgcattccagcctgggcaacacagcaagactccatctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47922605 234 + 51301725 ccaaggtgggtggatcacaaggtcaggagttcgagaccagcctggtcaacatggtgaaacaccatctctactaaaaatataaaaaattagctgggcatagtggcacatgcctataatcccagctacttgggaggctgagtcaggagaattacttgaacccgggaggtggaggttgcagcgagctgagatcgtaccactgcattccagcctgggcaacac-gcaagactccatctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47625783 235 + 50890351 tcaaggtgggcagatcagaaggtcaggagttcgagaccagcctggtcaacatggtgaaacaccatctctactaaaaatataaaaaattagctgggcatggtggcacgtgcctgtaatcccagctacttgggaggctgagtcaggagaattacttgaacccaggaggtggaggttgcagtgagccgagatcgtgccattgcactccagcctgggagacacagcaagactccatctc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e rheMac3.chr19 60673447 681 + 64156825 I a score=143443.000000 s hg38.chr19_GL949747v2_alt 679757 141 + 729520 gagg--aaaaaaaaaaa--tgatattgccccattgcactccagact-gacaacagagcaagaccctgtctcagaaaacgaagaggaggaggaaaaaaaaaGTACTAAttatctgaaattccaatttaaccaggcatccagtgtttt s panTro4.chr19 59946229 134 + 63644993 gagg--gaaaaaaaa----tgatattgccccattgcactccacact-gacaacagagcaagaccctgtctcagaaaaagaagaagag-----aaaaaaaaGTACTAAttatctgaaattccagtttaaccaggcatccagtgtttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56895041 140 + 60714840 gagg--aaaaaaaaaaaaTTgatattgcaccattgcactccagact-ggcaac-gagcaagaccctgtctcagaaaaagaagaagaggag--aaaaaaaagtactaattatctgaaattccaatttaaccaggcatccagtgtttt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55815513 141 + 59248254 -gag--aaaaaaaaaat--tgagattgcaccactgcactcaagactgggcaacagagcaagaccctgtctcagtaaaataagaagaagagaaaaaaaaaGGTACTAAttatctgaaattcaaatttaaccaggcatccagtgtttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47922839 135 + 51301725 -aag--aaaaaaaaaat--tgagattgcaccactgcactcaggactgggcaacagagcaagaccctgtctcagtaaaataagac------aaaaaaaaaggtactaattatctgaaattcaaatttaaccaaGCATCCAGTGTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47626018 142 + 50890351 -aagaaaaaaaaaaaat--tgagattgcaccactgcactcaggactgggcaacagagcaagaccctgtctcagtaaaataagaagagga-gaaaaaaaaaGTACTAAttatctgaaattcaaatttaaccaagcatccggtgtttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e nomLeu3.chr10 103371788 0 - 106955855 C e rheMac3.chr19 60673447 681 + 64156825 I a score=536423.000000 s hg38.chr19_GL949747v2_alt 679898 684 + 729520 atctggtaaccctCATTCTTacacacacac-------acacacacacacac------acacaAaggcgggatagttgtcattcccactgtaaacataaggaaactgggcagaggccaagcaaccttgtgtagctcacatagcaagaagtgggtgaacccagctcatgtcttgactctgagctcagAGAGTGACAACTTGTCACCAGCGCCCCCATAGCCACCACCCTTTGTCCACCCCAGGCTCCCTCTGCACCCCAACGCAAGCTCCG-GCCGCTTCTCTGTCCCCCTCCTCCTGCCGCATCACAGCCCACCTCAGCCTCTTTGTAGGTTTCCATGCGACGCTGTACCATGGCTGGGAGTCTTccaggcgccgtgctgagcgccttctgtgcatggactccaagtcgccataatcgtacgggttacccaccattatcagtcccctcttatacatcaggctagtgagacagtatcttatccacagtcctacagctggcagga-gtagattcaaaccctagcagCACCAATTAGTGGTAAAGAGTGTGGACTTGGgaacttacaggagtagagagcacagtggtggttacc-ggggcggtggggtaaggtttggggagatgttggtcagaggagg-acagtttcagttggacaagaggagtatgtcttggagatctactgcacatcatggtgactgtagtta s panTro4.chr19 59946363 691 + 63644993 atctggtaaccctCATTCTTacacacacaccacacacacacacacacacac------acacaAaggtgggatagttgtcattcccactataaacataaggcaactgggcagaggccgagcaaccttgtgtagctcacatagcaagaagtgggtgaacccagatcatctcttgactctgagctcagAGAGTGACAACTTGTCACCAGCGCCCCCGTAGCCGCCACCCTTTGTCCACCCCAGGCTCCCTCTGCACCCCAACCCAAGCTCCG-GCCGCTTCTCTGTCCCCACCCTCCTGCCGCATCACAGCCCACCTCAGCCTCTTTGTAGGTTTCCATGCGACGCTGTACCATGGCTGGGAGTCTTccaggcgccgtgctgagcgcctgctgtgcatggactccaagtcgccataatcgtacgggttagccaccattatcagtcccctcttatacatcaggctagtgagacagtatcttatccacagtcctgcagctggcagga-gtagattcaaaccctagcagCGCCAATTAGTGGTAAAGAGTGTGGACTTGGgaacttacaggag-agagagcacagtggtggttaccaggggtggtgggttaaggtttggggagatgttggtcaaaggagg-acagtttcagttggacaagaggagtatgtcttggagatctactgcacatcatggtgactgtagtta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56895181 685 + 60714840 atctggtaaccctCATTCTTacacacacgc-------acacgcacacacac------acacaAaggtgggatagttgtcattcccactgtaaacataaggaaactgggcagaggatgagcaaccttgtgtagctcacatagcaagaagtgggtgaacccagatcatctcttgactctgagctcagAGAGTGACAACTTGTCACCAGCTCCCCCGTGGCCACCACCCTTTGTCCACCCCAGGCTCCCTCTGCACCCCAACCTAAGCTCCGTGCCGCTTCTCTGTCCCCCTCCTCCTGCCCCATCACAGCCCCCCTCAGCCTCTTTGTAGGTTTCCATGCGATGCTGTACCATGGCTGGGAatcttccaggcgccgtgctgagcgccttctgtgcatggactccaagtcaccataatcgtacgggttagctaccattatcagtcccctcttatacatcaggctagtcagacagtatcttatccacagtcctacagctggcagga-gtagatgcaaaccctagcagCACCGATTAGTGGTAAAGAGTGTGGACTTGGgaacttacaggagtagagagcgctgtggtggttaccaggggtggtggggtaaggtttgaggagatgttggtcaaaggagg--cagtttcagttggataagaggagtatgtcttggagatctactgcacatcatggtgactgtagtta i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47922974 672 + 51301725 ATCTGGTAACCCTcattcttacacacacac-------acacacacacacacacacacacacagaggcggGATAGTTGTCATTCCCACTGCAAAC--AAGGAAACTAGGCAGAGGCTGAGCAACCTTCCGTAGCTCACATAGCAAGAAGTGGGTGAACCCAGATCATCTCTTGACTCTGAGCTCAGAGAATGACAACTGGTCACCAGCTCCCCAGTGGCCACCACCCATTGTCGACCACAGGCTCCCTCTGCACCCCAACCCAAGCTCCG-GCCGCTTCTCTgtccccctcctcctgccccatcacagcccacctcagcctctttgtA---------GCAACCCTGTACCATGGCTGGGAACCTTCCAGGTGCCGGGCCGAGCGCCTCCTGTGCGTGGACTCCAAGTCGCCGTAATCGCACGGGTTAGCTAACGTTATCAGTCCCCTCTTACACATCAGGCTAGTGAGACAGAATCTTATCCACAGTCCTACACCTGGCAGGAGGGGAGTTCAAACCCTAGCAGCACCGTTTAGTGGTAAAGAGTGTGGACCTGGGAATTTACAGGAGCAGA---------GGTGGTTACC-GGGGTGGTGGGGTAAGgtttggggagatgttggtcgaAGGAGACACAGTTTTAGTTGGACAGGAGGAGTGTATCTTGGAGATCTATTGCACATcgtggtgactgtagtta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47626160 651 + 50890351 atctagtaaccctCATTCTTacacacacac-------acacacacacacac------------aggcaggatagttgtcattcccactgcaaac--aaggaaactgggcagaggctgaacaaccttctgtagctcacatagcaagaagtgggtgaacccagat-gtctcttgactctgagctcagAGAGTGACAACTGGTCACCAGCTCCCCAGTGGCCACCAGCCTTTGTCAACCACAGGCTCCCTCTGCACCCCAACCCAAGCTCCG-GCCGCTTCTCTGTCCCCCTCCTCCTGCCCCATCACAGCCCACCTCAGCCTCTTTGTAGGTTTCCATGCGACCCTGTACCATGGCTGGGAACCTTCCAGGTGCCGTGCTGAGCGCCTCCTGTGTGTGGACTCCAGGTCGCCGTAATCGTACGGGTTAGCTACCGTTATCAGCCCCCTCTTACACATC-----------------TCTTATCCACAGTCCTACACCTGGCAGGAGGTGGGTTCAAACCCTAGCAGCACCGTTTAGTGGTGGAGAGTGTGGACTTGGgaatttacaggagcaga---------ggtggttacc-ggggtggtggggtaaggtttggggagatgttggtcaaaggagacacagtttcagttggacaggaggagtgtgtcttggagatctattgcacgtcgtggtgactgtagtta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e nomLeu3.chr10 103371788 0 - 106955855 C e macFas5.chr19 55815654 0 + 59248254 C e rheMac3.chr19 60673447 681 + 64156825 I a score=244771.000000 s hg38.chr19_GL949747v2_alt 680582 200 + 729520 ataacaacatattgtacacttgcatatcaccgatagtagattttaaatgttctcaccggccgggcgcgctggctcacacctgtaatcc---cattttgggaggccaaggtgggcggatcacctgaagtcaggagttcgagagcagcctgaccaacatggtgaaaccctgtctctactaaaaatacaaaaattagcggggcgta s panTro4.chr19 59947054 200 + 63644993 ataacaacatattgtacacttgcatatcactgatagtagattttaaatgttctcaccggctgggcgcggtggctcacacctgtaatcc---cattttgggaggccaaggtgggcggatcacctgaagtcaggagttcgagaccagcctgaccaacatggtgaaaccctgtctctgctaaaaatacaaaaattagcggggcgta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56895866 200 + 60714840 ataacaacatattgtacacttgcatatcactgagagtagattttaaatgttctcaccggccgggcgcggtggctcacgcctgtaatcc---cattttgggaggccgaggtgggcggatcacctgaagtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaattagtggggcgtA i ponAbe2.chr19 C 0 M 221 s macFas5.chr19 55815654 201 + 59248254 atAACAACATATTGCACACTCGCATATCACTGAGAGTAGGTTTTAAA-GTTCTCACTggccaggcgcagtggctcacacctgtaatcccagcattttgggaagccaaggcgggtggctcacctgaagtcaggagttcaagaccagcctgaccaacatgg-gaaaccctgtctctagtaaaagtacaaaaataagctgggcgta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47923646 202 + 51301725 ataacaacATATTGCACACTCGCATATcactgagagtagattttaaa-gttctcactggccaggcgcggtggctcacacctgtaatctcagcattttgggaagccaaggcgggtggatcacctgaagtcaggagttcaagaccagcctgaccaacatggtgaaaccctgtctctactaaaagtacaaaaataagatgggcgta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47626811 202 + 50890351 ataacaacatattgcacactcgcatatcactgagagtagattttaaa-gttctcacTggccgggcgcggtggctcatgcctgtaatcccagcattttgggaagccaaggcgggtggatcacctgaagtcaggagttcaagaccagcctgaccaacatggtgaacccctgtctctactaaaagtacaaaaataagctgggcgta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e nomLeu3.chr10 103371788 0 - 106955855 C e rheMac3.chr19 60673447 681 + 64156825 I a score=13116.000000 s hg38.chr19_GL949747v2_alt 680782 14 + 729520 gtggcaggagcctg s panTro4.chr19 59947254 14 + 63644993 gtggcaggagcctg i panTro4.chr19 C 0 C 0 s macFas5.chr19 55815855 14 + 59248254 gtggtaggagcctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47923848 14 + 51301725 gtggcaggagcctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47627013 14 + 50890351 gtggcaggagcctg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56896066 221 + 60714840 M e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e nomLeu3.chr10 103371788 0 - 106955855 C e rheMac3.chr19 60673447 681 + 64156825 I a score=249195.000000 s hg38.chr19_GL949747v2_alt 680796 203 + 729520 taatcccagctacttgggaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgagccaacgtcatgccactgcgctccagtctgggcaacagagtgagactccatgtcaaaaaataaaaataaataaaaataaaTGAGcgtggaatactactcagccattaaaaggagtgaaataatgtcttttggcca s panTro4.chr19 59947268 203 + 63644993 taatcccagctactcgggaggctgaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccaatgtcatgccactgcactccagtctgggcaacagagtgagactccatgtcaaaaaataaaaataaataaaagtaaaTGAGcgtggaatgctactcagccattaaaaggagtgaaataatgtcttttggcca i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60674128 197 + 64156825 taatcccagctacccaggaggctgaggcaggagaatcacttgaacctgggagatggaggttgcggtgagctgacatcacaccactgcactccagcctgggcgacagagtgagactctgtgtca------aaaaataagtaaaaataaaTGAGTGtggaatactactcagccattaaaaggaacaaaataatgtcctttggcca i rheMac3.chr19 I 681 C 0 s macFas5.chr19 55815869 197 + 59248254 taatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggagatggaggttgcggtgagctgacatcacaccactgcactccagcctgggcgacagagtgagactctgtgtca------aaaaataagtaaaaataaaTGAGTGtggaatactactcagccattaaaaggaacagaataatgtcctttggcca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47923862 197 + 51301725 taatcccagctactcaggaggcagaggcaggagaatcacttgaacctgggagatggaggttgcagtgagttgacatcatgccactgcactccagcctgggcgacagagtgagactctgtgtca------aaaaatcagtaaaaataaatgagtgtgaaatactactcagccattaaaaggaacaaaataatgtcctttggcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47627027 197 + 50890351 taatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggagatggaggttgcagtgagctgacatcatgccactgcactccagcctgggcgacagagtgagactccatgtca------aaaaataagtaaaaataaaTGAGTGtggaatactactcagccattaaaaggaacaaaataatgtcctttggcca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56896066 221 + 60714840 M e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e nomLeu3.chr10 103371788 0 - 106955855 C a score=461889.000000 s hg38.chr19_GL949747v2_alt 680999 276 + 729520 ggcacagtggctcacatctgtaatgccagcactctgggaggccgaggtgggtggatcacgaggtcaagagatcaagaccatcctgcccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcatggtggcgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatcacttaaacccgggaggtggagtttgcagtaagccgagatcacaccactgcactccagccttggtgagagagcgagattccgtcttt s panTro4.chr19 59947471 276 + 63644993 ggcacagtggctcacatctgtaatgccaatactctgggaggccgaggtgggtggatcacgaggtcaagagatcaagaccgtcctgcccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcgtggtggcgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatcacttaaacccgggaggtggagtttgcagtaagccgagatcacaccactgcactccagccttggtgagagagcgagattccgtcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56896287 276 + 60714840 ggcacagtggctcacatctgtaatgccagcagtctgggaggtcgaggcaggtggatcacgaggtcaagagatcaagaccatcctccccaacacggtgaaaccccatctctactaaaaatacaaaaattagccaggtgtggtggtgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacccgggaggtggagtttgcggtgagccgagatcacaccactgcactccagcctcggtgagagagcgagattccgtctta i ponAbe2.chr19 M 221 C 0 s rheMac3.chr19 60674325 271 + 64156825 ggcacagtggctcacacctgtaatgccagcactctgggaggccgaggcgggtggatcatgaggtcaagagatcaagaccatcctggctaacacggtgaaa-cccgtctctactaaaaatacaaaaattagccgggcgtggtgac-ggcgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacccgggaggaggaggttgcagtgagctgagatcacgctgctgtactccagtctcggc--aacagcgagattccagctc- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55816066 271 + 59248254 ggcacagtggctcacacctgtaatgccagcactctgggaggccgaggcgggtggatcatgaggtcaagagatcaagaccatcctggctaacacggtgaaa-cccgtctctactaaaaatacaaaaattagccgggcgtggtgac-ggcgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacccgggaggaggaggttgcagtgagctgagatcacgctgctgtactccagtctcggc--aacagcgagattccagctc- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47924059 273 + 51301725 ggcacagtggctcacgcctgtaatgccagcactctgggaggccgaggcgggtggatcatgaggtcaagagatcaagaccatcctcctcaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggcaggcgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacccgggaggaggaggttgcagtgagccaagatcacgctgctgTACTCCAGTCTCAGC--AAcagccagattccatctc- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47627224 273 + 50890351 ggcacagtggctcacacctgtaatgccagcactctgggaggccgaggccggtggatcatgaggtcaagagatcaagaccatcctcctcaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgggcgcctgtagtcccagctacttgggaggctgaggcaggagaattgcttgaacccgggaggaggaggttgcagtgagccgagatcatgctgctgtactccagcctcggc--aacagccagattccgtctc- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e nomLeu3.chr10 103371788 0 - 106955855 C a score=16509.000000 s hg38.chr19_GL949747v2_alt 681275 14 + 729520 aaaaaaaaaaaaaa s panTro4.chr19 59947747 14 + 63644993 aaaaaaaaaaaaaa i panTro4.chr19 C 0 I 185 s ponAbe2.chr19 56896563 8 + 60714840 aaaaaaaa------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103371788 14 - 106955855 aaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60674596 11 + 64156825 aaaaaaaaaaa--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55816337 10 + 59248254 -aaaaaaaaaa--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47924332 11 + 51301725 aaaaaaaaaaa--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47627497 11 + 50890351 aaaaaaaaaaa--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I a score=1447791.000000 s hg38.chr19_GL949747v2_alt 681289 632 + 729520 aaagtcttttgcagcaacttggatggagctggaaggcattattctaagtaaagtaatacaggagtggaaaacaaaaatctgtatattctcacttataagtgagagctaagctgtgggtatgcaaaggc----atgcagagtgatgtaatggacttcagagactcagaagggaagggcagaagtggggcagggatgaaaaactacacattaggtacaaggtacactagtcaggtgacaggtgcactaaaatctcagaattcaccagaatataattcatccatgtaaccaagaaccacttgtatcccaaaagctactgaagcaacaa----GCCAGATGCAGTAACCTGTACAGGCcacacctgtaaccccaacactttgggaggccgaggtgggtggatcgcttgagcccaggagttcaagaccagcctgggcaacatagcg-gacccccgtaact-aaaaaaattacaaaaacaagccaggcatgatggtgtacaactgtagttccagatactcaggaggctgatggggaggcactggttgagcctgggaggttgaggctgcagtgagccatgatcatgccactgccctcctgcctgggtgacagaagtgaggccctatctcaaataaaattaaataaataa s panTro4.chr19 59947946 632 + 63644993 aaagtcttttgcatttacttggatggaactggaaggcattattctaagtaaagtaatacaggagtggaaaacaaaaatctgtatattctcacttataagtgagagctaagctgtgggtatgcaaaggc----atgcagagtgatgtaatggacttcagagactcagaagggaagggcagaagtggggtagggatgaaaaactacacattaggtacaaggtacactagtcaggtgacaggtgcactaaaatctcagaattcaccagaatataattcatccatgtaaccaagaaccacttgtatcccaaaagctactgaagcaacaaTTAAGCCAGATGCAGTAACCTGTACAGGCcacacctgtaaccccaacactttgggaggccgaggtgggtggatcgcttgagcccaggagtttgagaccagcctgggcaacatagcgagacccccataact-aaaaaaattacaaaaatgagccaggcatgatggtgtgcaactgtagttccagctactcaggaggctgatggggaggcattggttgagcctgggaggttgaggctgcagtgagccatgatcatgccactgccctccagcctgggtgacagaagtgaggccctatctc-----aaattaaataaataa i panTro4.chr19 I 185 C 0 s ponAbe2.chr19 56896571 638 + 60714840 aaagtcttttgcagcaacttggatggaggtggaaggcattattctaagtaaagtaacacaggagtggaaaacaaaaatctgtatgttctcacttataagtgagagctaagctgtgggtatgcaaaggc----atgcagagtgatgtaatggacttcggagactcagaagggaagggcagaaggcgggtagggatgaaaaactacacattaggtacaaggtacagtagtcaggtgacaggtgcactaaaatctcagaattcaccagaatagaattcatccatgtaaccaagaaccacttgtatcccaaaagctactgaagcaaaaaTTAAGCCAGATGCAGTAACCTGTACAGGtcacacctgtaaccccagcactttgggaggctgaggtgggtggatcgcttgagcccaggagttcgagaccagcctgggcaacatagtgagacccccgtaactaaaaaaaatcacaaaaatcagccaggcatgatggtgtgcaactgtagttccagctactcaggaggctgatggggagggattgattgagcctgggaggttgaggctgcagtgagccatgatcatgccactgcactccagcctgggccacagaagtgaggccctgtctcaaataaaattaaacaaataa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103371802 631 - 106955855 aaagtcttttgcagcaacttggatggagctggaaggcattattct-----aagtaacacaggagtggaaaacaaaaatctgtattttctcacttataagtgagacctaagctgtgggtatgcaaaggc----atgcagagtgatgtaatcgacttcagacactcagaagggaagggcagaaggggggtagggatgaaaaactacacattaggtacaaggtacactagtcaggtgacaggtgcactaaaatctcagaattcaccagaatataatccatccacataaccaagaaccacttgtatcccaaaagctgttgaagcaaaCATTAAGCCAGATGCAGTAACCTGTAGAGGtcacacctgtaaccccaacactttgggaggctgaggtgggtggattgcttgagcccaggagttcgagaccagcctgggcaacatagcgaga-ccccgtaact-acaaaaattacaaaaatgagccaggcatgatggtgtgcaactgtagttccagctattcaggaggctgatggggaaggactggttgagcctgggaggttgaggctgcagtgagccatgatcatgccactgtactccagcctgggtgacagaagtgaagccctgtctcaaataaaattaaataaataa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60674607 630 + 64156825 at-gtc--ttgcagcaacttggatgtagctgg-aggcattattctaagtaaagtaacacaggagtggaaaacaaaaatctgtatgttctcacttacaagtgagagctaagctgtgggtatgcaaaggc----atacagggtgatgtaatggacttcagagactcagaagagaagggcagaaggtgggtagggatgaaaaactacacattaggtacaaggtatactactcaggtgacaggggcactaaaatctcagaattcaccactatatagttcatccatgtaaccaacaaccacttgtatcccaaaagcaattgaagcaaaaaTTAAGCCAGATGCAGTAACCTGTACAGGtcaaacctgtaaccccaacactttgggaggccgaggtaggtggatcgcttgaacccaagagttcgagaccagcctgggcagcatagcgaga-ccccataact-acaaaaattacaaaaatgagccaggcatgatggtgtgcaactgtagttccagctactcaggaggctgatggggaaggatcggttgagcctgggaggttgaggctagagtgagccatgatcatgccactgcactccagcctgggtgacagaa--gaggccctgtctcaagtaaaattaaataaataa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55816347 632 + 59248254 at-gtc--ttgcagcaacttggatgtagctgg-aggcattattctaagtaaagtaacacaggagtggaaaacaaaaatctgtatgttctcacttacaagtgagagctaagctgtgggtatgcaaaggc----atacagggtgatgtaatggacttcagagactcagaagagaagggcagaaggtgggtagggatgaaaaactacacattaggtacaaggtatactactcaggtgacaggggcactaaaatctcagaattcaccactatatagttcatccatgtaaccaacaaccacttgtatcccaaaagcaattgaagcaaaaaTTAAGCCAGATGCAGTAACCTGTACAGGtcaaacctgtaaccccaacactttgggaggccgaggtaggtggatcgcttgaacccaagagttcgagaccagcctgggcagcatagcgaga-ccccataact-acaaaaattacaaaaatgagccaggcatgatggtgtgcaactgtagttccagctactcaggaggctgatggggaaggattggttgagcctgggaggttgaggctagagtgagccatgatcatgccactgcactccagcctgggtgacagaagtgaggccttgtctcaagtaaaattaaataaataa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47924343 622 + 51301725 acagtc--ttgcagcaacttggatgtagctgg-aggcattattctaagtaaagtaacacaggagtggaaaacaaaaatc--tatgttctcacttacaagtgagagctaagctgtgggtatgcaaaggc----atacggGGTGATGTAATGGACTTCAGAGACTCAGAAGGGAAAGGCAGAAGGGGGGTAGGGATGAAAaactacacattaggtacaaGGTATACTACTCAGGTGACAGgggcactaaaatctcagaattcaccactatatagTTCATCCATGTAATCAATAACCACTTGTATCCCAAAAGCAATTGAAGCAAAAATTAAGCCAGAGGCAGTAACCTGTACaggtcacacctgtaaccccaatgctttgggaggccgaggtgggtggatcgcttgaacccaagagttcgagaccagcctgggcagcatagcaaga-ccccataact-acaaaaattacaaaaatgagccaggcatgatggtgtgcaactgtggttccagctactcaggaggctcatggggaaggattggttgagcctgggaggttgaggctgcagtgagccatgatcatgccactgcactccagcctgggtgacagaagtgaggccctgtctcaagtaaaatt---------a i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47627508 634 + 50890351 aaagtc--ttgcagcaacttggatgtagctggaaggcattattctaagtaaagtaacacaggagtggaaaacaaaaatctgtatgttctc----acaagtgagagctaagctgtgggtgtgcgaaggcgtatatacagggtgatgtaatggacttcagagactcagaagggaagggcagaaggggggtagggatgaaaaactacacattaggtacaaggtacactactcaggtgtcaggtgcactaaaatcccagaattcaccactatatagttcatccatgtaaccaacaaccacttgtatcccaaaagcaattgaagcaaaaaTTAAGCCAGAGGCAGTAACCTGTACAGGtcacacctgtaaccccaacactttgggaggccgaggtgggtggatggcttgaacccaacagttcgagaccagcctgggcagcatagcgaga-ccccataact-acaacaattacaaaaatgagccaggcgtgatggtgtgcaactctagttccagctactcaggagactgatggggaaggattggttgagcctgggaggtggaggctgcagtgagccatggtcatgtcactgcactccagcctgggtgacagaagtgaggccctgtctcgagtaaaattaaataaataa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I a score=715218.000000 s hg38.chr19_GL949747v2_alt 681921 273 + 729520 aaGTTAAAAC-Aggctgggtgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtgga--acctgaagtaaggagcttgagaccagcctggccaacatggtgaaaccccgcccctactaaaaatacaataatt-agccagacctggtggcagatgcctgtaatcccaactattcgggaggctgaggcaggagaatcacttggacccgggaggcagagtttgcagtgagctgagatcatgccattgcattccagcctgagcgac s panTro4.chr19 59948578 273 + 63644993 aaGTTAAAAC-Aggctgggtgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggtgga--acctgaagtaaggagctcgagaccagcctggccaacatggtgaaacgccgcccctactaaaaatacaataatt-agccagacctggtggcagatggctgtaatcccaactactcgggaggctgaggcaggagaatcacttggacccgggaggcagagtttgcagtgagctgagatcatgccattgcactccagcctgagcgac i panTro4.chr19 C 0 M 571 s ponAbe2.chr19 56897209 275 + 60714840 aaGTTAAAAC-Aggccggacacagtggctcatgcctgtaatcccagcactttgggaggctgaggcgggtggatcacctgaagtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaatt-agccagacctggtggcggatgcctgtaatcccagctactcgcgaggctgaggcagaagaatcacttggacccgggaggcggagtttgcagagagctgagatcatgccattacactccagcctgagcgac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103372433 275 - 106955855 aGGTTAAAAC-Aggccgggcgcggtgcctcacgcctgtaatcccagcactttgggaggccgaggtgggtggatcacctgaagtcaggagttcgagaccagcctggccaacatggtgagaccccgtctttactaaaaatacaaaaatt-agccagacctggtggcagatgcctgtaatcccagctactcgggagtctgaggcaggagaatcacttggacccgggaggcggagtttgcagtgagctgagatcacaccactgcactccagcctgtgtgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60675237 275 + 64156825 aaGTTAAAAC-Aggccggatgcggtggctcacgcctgtaaccccagcactttgggaggccgaggcgggtagatcacctgaagtcaggagttcaagtccagcctggtcaacatggtgaaaccccgtctctactaaaaatataaaaatt-agccggacctggcggtggatgcctgtaatcccagctacttcggaggctgaagcaggagaatcacttggacccaggaggcagagtttgcagtgagccaagatcgtgccactgcactccagcctgagcaac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55816979 275 + 59248254 aaGTTAAAAC-Aggccggatgcggtggctcacgcctgtaaccccagcactttgggaggccgaggcgggtagatcacctgaagtcaggagttcaagtccagcctggtcaacatggtgaaaccccgtctctactaaaaatataaaaatt-agccggacctggcggtggatgcctgtaatcccagctacttcggaggctgaagcaggagaatcacttggacccaggaggcagagtttgcagtgagccaagatcgtgccactgcactccagcctgagcaac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47924965 276 + 51301725 aagttaaaac-aggctggacgcggtggctcacgcctgtaaccccagcactttgggaggccgaggcaggtggatcacctgaagtcaggagttcaagtccagcctggccaacatgttgaaaccctgtctctactaaaaatataaaaattaagcgGGAcctggtggtagatgcctgtaatcccagctacttcggaggctgaagcaggagaatcacttggacccaggaggctgagtttgcagtgagccaagatcgtgccactgcactccagcctgagcgac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47628142 275 + 50890351 aaGTTAAAAC-Aggccggacgcggtagctcacgcctgtaaccccagcactttgggaggccgaggcggggggatcacctgaagtcaggagttcaagtccagcctggccaacatggtgaaaccctgtctctactaaaaatataaaaatt-agccggacctggtggtagatgcctgtaatcccagctacttcagaggctgaagcaggagaatcacttggacctgggaggcggagtttgcagtgagctgagatcgtgccactgcactccagcttgagcgac i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 44464 227 + 138250 aagcaaaaaCGAAGCCAGACACTGTGGCTCACACCTGTAACccc----------------------------------------aggagttcaagaccagcctgggcaacatagcgagatcctgt---------aactacgaaaatt-agccaggcgtgatggtatgcagctggagttccagctactcaggagatagagggggagggattgcttgagcctgggaggtggaggttgcagtgagccatgatcgtgccactgcactccagcctgggtgac i calJac3.chr22_GL285922_random I 1464 C 0 e canFam3.chr1 20089264 2803 - 122678785 I a score=415583.000000 s hg38.chr19_GL949747v2_alt 682194 213 + 729520 cgactgagcgagactccatctc------aa---aaaacaaacaaaaa-----gaaaaaaagaaTACATCCATGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACCCTCTCATCTCCAGTAATGCAACCATCTTCTTCCTGCTTAGCCTTTTGGAGATGCTGTCCCTTTAGTGGTCAAATT---CTGAAGAAATCAGGAAATAATGCATTCGACATGCCCA s ponAbe2.chr19 56897484 206 + 60714840 cgactgagcgagactccatctc------aa---aaaacaaacaaaca------------agaaTACATCCGTGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACCCTCTCATCTCCAGTAATACAACCATCTCCTTCCTGCTTAGCCTTTTGGAGATGCTATCCCTTTAGTGGTCAAATT---CTGAAGAAATCAGGAAATAATGCATTCGACATGCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103372708 216 - 106955855 cgactgagcgagactccatctc------aa---aaaaaaaaaaaaaaaacaaaaaaaaCAGAACACATCCGTGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACCTTCTCATCTCCAGT--TACAACCATCTCCTTCCTGCTTAGCCTTTTGGAGATGCTGTCCCTTTAGTGGTCAAATT---CTGAAGAAATCAGGAAATAATGCATTCGACATGCCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60675512 220 + 64156825 caacagagcgagactccatctcaaaaaaaa---aaaaaaaaaaaaaaGTT-------AAAGAATACATCCGTGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACCCTCTCATCTCCAGTAACACAACCATCTCCTTCCTGCTTAGCCTTTTGGAGATGCTGTCCCTTTAGTGGTCAAATTCTCCTGAAGAAATCAGGAAATAATGCATTCGACATGCCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55817254 214 + 59248254 caacagagcgagactccatctc------aa---aaaaaaaaaaaaaaGTT-------AAAGAATACATCCGTGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACCCTCTCATCTCCAGTAACACAACCATCTCCTTCCTGCTTAGCCTTTTGGAGATGCTGTCCCTTTAGTGGTCAAATTCTCCTGAAGAAATCAGGAAATAATGCATTCGACATGCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47925241 204 + 51301725 caacagagcgagactccgtcta---cacaa---aaaaaaaaaaaaaatttt-aaaacaaagaatacaCCCATGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACTCTCTCATCTCCAGTAACACAACCATCTCCTTCCTGCTTAGCCTTTTGGAGATGCTGTCCTTTTAGTGGTCAAATTCTCCTGAAGAAATCAGGAAAT------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47628417 213 + 50890351 caacagagcgagactccatctc-------a---aaaaaaaaaaaaaaGTT-------AGAGAATACATCCGTGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACCCTCTCATCTCCAGTAACACAACCATCTCCTTCCTGCTTAGCCTTTTGGAGATGCTGTCCCTTTAGTGGTCAGATTCTCCTGAAGAAATCAGGAAATAATGCATTCGACATGCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 44691 205 + 138250 ---aaaagtgagaccctgtctc------aaaTCAAATTACATAAAAATTA-------AAATACTACGTCCATGTATGAAT----GATGAGAGGTTGTTTATTGTCACAGTTTACCC-----TCTCCAGTAACACAACCATCTCCTTCCTGCTTAGCCTCTTGGAGACGCTGTCCCGCTAGTGGTCAAATTCTCCTGAAGAAATAAGGCAATAATGCATTCGACGTGCCta i calJac3.chr22_GL285922_random C 0 I 120 e canFam3.chr1 20089264 2803 - 122678785 I e panTro4.chr19 59948851 571 + 63644993 M a score=6620.000000 s hg38.chr19_GL949747v2_alt 682407 5 + 729520 GCACA s ponAbe2.chr19 56897690 5 + 60714840 GCGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103372924 5 - 106955855 GCACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60675732 5 + 64156825 GCACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55817468 5 + 59248254 GCACA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47628630 5 + 50890351 GCACA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 44896 120 + 138250 I e papAnu2.chr19 47925445 0 + 51301725 C e panTro4.chr19 59948851 571 + 63644993 M a score=190398.000000 s hg38.chr19_GL949747v2_alt 682412 91 + 729520 AGTGAAGATCAGGCAGCAGAAATGCATTCGACCTGCCACCCATCCATCAGGAGAC---TATTTACTCCACTACTGTAGGGGATACTGACAAATT s ponAbe2.chr19 56897695 94 + 60714840 AGTGAAGATCAGGCAGCAGAAATGCATTCGACCTGCCACCCATCCATCAGGAGACTCTTATTTACTCCACTACTGTAGGGGATACTCACAAATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103372929 94 - 106955855 AGTGAAGATCAGGCAGCAGAAATGTATTCGACCTGCCACCCATCCGTCAGGAGACTCTTATTTACTCCACTACTGTAAGGGATACTGACAAATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60675737 94 + 64156825 AGTGAAGAGCAGGCAGTGGAAATGCATTCGACCTGCCACCCATCGGTCAGGAGACTCTTACTTACTCCACTGCTGTAGGGGATACTGACAAATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55817473 94 + 59248254 AGTGAAGAGCAGGCAGTGGAAATGCATTCGACCTGCCACCCATCGGTCAGCAGACTCTTACTTACTCCACTGCTGTAGGGGATACTGACAAATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47925445 74 + 51301725 --------------------AATGCATTCGACCTGCCACCCATCGGTCAGGAGACTCTTATTTACTCCACTGCTGTAGGGGATACTGACAAATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47628635 93 + 50890351 AGTGAAGAGCAGGCAGCAGAAATGCATTCGACCTGCCACCCATCGGTCAGGAGACTCTTA-TTACTCCACTGCTGTAGGGGATACTGACAAATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 45016 90 + 138250 AGTGAGGAATAGGCAGCAGAAATGCATTTGACCCATCACCCATCCTTCAAGAGACTC----TTACTCCACTACTATAGGTGATACTGACAAATT i calJac3.chr22_GL285922_random I 120 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e panTro4.chr19 59948851 571 + 63644993 M a score=813299.000000 s hg38.chr19_GL949747v2_alt 682503 294 + 729520 AAATCCAT-ACCTAGTCCAGATATCA---ATTCCACAAtttttttttttttt-----------tttttgagacggagtttcgctcttgttgcccaggccagagtgcaatggtgtgatcttggctcaccgcaacctccacctcccaggttcaagcgattctcctgccttagcctccagagtagctgggattacaggcatgtgccaccacacccggctaattttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcaaactcccgacctcagatggcccacccgcctcggcctcc s panTro4.chr19 59949422 292 + 63644993 AAATCCAT-ACCTAGTCCAGATATCATCAATTCCACAAtttttttttttttt----------------gagacggagttttgctcttgttgcccaggccagagtgcaatggtgtgatcttggctcaccgcaacctccgcctcccaggttcaagcgattctcctgccttagcctccagagtagctgggattacaggcatgtgccaccacgcccggctaattttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcaaactcccaacctcagatggcccacccgcctcggcctcc i panTro4.chr19 M 571 C 0 s ponAbe2.chr19 56897789 306 + 60714840 AAATCCAT-ATCTAGTCCAGATATCATCAATTCCACAAttttttttttttttttttttttttttttttgagacggaatttcgctcttattgcccaggccggagtgcaatggcgcgatctcggctcaccgcaacctccgcctcccgggttgaagcgatcctcctgcctgagcctccaaagtagctgggattacaggcctgtgccaccatgcccaactaattttgtatttttagtagagatggggtttctccatg-tggtcaggctgg-ctccaactcccgacctcaggtgacccacttgccttggcctcc i ponAbe2.chr19 C 0 T 4579 s nomLeu3.chr10 103373023 295 - 106955855 AAATCCAT-ACCTAGTCCAGATATCATCAATTCCACAAtttttttttttttt-------------tttgagacagagttttgctcttgttgcccaggccagaatgcaatggtgtgatcttggctcaccacaacctctgccttctgggttcaagtgattctcctgcctcagcctccagagtagctgggattacaggcatgtaccaccacacccggctaattttgtatttgtagtagagatggggtttctccatgttggtcaggctagtctcaaactcccgacctcaggtgacccacccgcctcagcctcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60675831 304 + 64156825 AAATCCATAACCTAGTCCAGATATCATCAAGTCCACAATTtttgtttgtttg-----tttgtttttttgagatggagttttgctcttgttgcccaggccggagtgtaatggcgtgatctcggctcactgcaacctccgcctcccagattcaagcgattctcctgcctcagcctccagagtagctgggattacaggcatgcgccaccacgcccagataattttgtattttcagtagagatggggtttctccgtgttggtcaggctggtctccagctcccaacctcaggtgatccgtccgcctcggtctcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55817567 304 + 59248254 AAATCCATAACCTAGTCCAGATATCATCAAGTCCACAAtttttgtctgtttg-----tttgtttttttgagatggagttttgctcttgttgcccaggccggagtgtaatggcgtgatctcggctcactgcaacctccgcctcccagattcaagcgattctcctgcctcagcctccagagtagctgggattacaggcatgtgccaccacgcccagataattttgtattttcagtagagatggggtttctccatgttggtcaggctggtctccaactcccaacctcaggtgatccgtccgcctcggtctcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47925519 303 + 51301725 AAATCCATAACCTAGTCCAGATATCATGAagtccactaatttt-tttttttt-----tttttttttttgaaacggagttttgctcttgttgcccaggccggagcgtaatggtgtgatctcggctcaccgcaacctccgcctcccggattcaagcaattctcctgcctcagcctccagagtagctgggattacaggcatgcaccaccacgcccagataattttgtatttgcagtagagatggggtttctccatgttggtcaggctggtctccaactcccaacctcagatgatccatccgcctcggtctcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47628728 304 + 50890351 AAATCCATAACCTAGTCCAGATATCATCAAGTCCACAAtttttgttcgtttg-----tttgtttttttgagacggagttttgctcttgttgcccaggctggagtgtaatggtgtgatctcggctcaccgcaacctccccctcccggattcaagcgattctcctgcctcagcctccagagtagctgggattacaggcgtgcgccaccacgcccagataattttgtattttcagtagagatggggtttctccatgttggtcaggctggtctccaactcccaacctcaggtgatccgtccgcctcggtctcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 45106 299 + 138250 CAGCCCATAACCTTGTCCTGATATCA---AGTCCACAttttttttttttttt-------tttttttttgagaccgagtttcgctcttgttgcccaggctggagtgcaatggcgcattctcagctccccacaacctccgcctcctggtttcaagtgattctcctgcctcagcctccagagtagctaggattacaggtatgtaccggcatgtctggctaactttgtatttctagtagaaacagggtttctccatgttggtcaggctggtcttgaactcccaagctcaggtaatccacccacctcaccctcc i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I a score=44023.000000 s hg38.chr19_GL949747v2_alt 682797 41 + 729520 caaagtgT-------------GTAAGCCATGGCACTCAGCCttttttttttttt s panTro4.chr19 59949714 41 + 63644993 caaagtgT-------------GTAAGCCATGGCACTCAGCCttttttttttttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103373318 39 - 106955855 caaagtgc-------------ATGAGCCATGGCACTCAGCtttttttttttt-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676135 27 + 64156825 caaagtgc-------------GTGAGCCACGGCACTCAGC-------------- i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55817871 27 + 59248254 caaagtgc-------------GTGAGCCACGGCACTCAGC-------------- i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47925822 27 + 51301725 caaagtgc-------------gtgagccacggcactcagc-------------- i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47629032 27 + 50890351 caaagtgc-------------GTGAGCCACGGCACTCAGC-------------- i chlSab2.chr6 C 0 I 1 s calJac3.chr22_GL285922_random 45405 50 + 138250 caaagtgctgggattacgggtgacagccaccacgcccggccAtttttttt---- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56898095 4579 + 60714840 T a score=818842.000000 s hg38.chr19_GL949747v2_alt 682838 288 + 729520 ttttttttttttttgagatggaggctctctctgttgcccaggctggagtgcaat-gcctgacctcagctcactgcaacttctgcctcccagtttcaagcaattctcccacctcagcctcccacgtagctgggattacaagcacc-cgccatcacgcccggcta--------atttttgtagagatggggtttcaccatgttgaccaggctggtcttgaactcctgacctcaggtgatccacccacctcggcctccc---aaggttgagattacaggcgtgagccactgtgcctggccCACA s panTro4.chr19 59949755 281 + 63644993 ttttttt-------gagatggaggctctctctgttgcccaggctggagtgcaat-gcctgacctcagctcactgcaacttctgcctcccagtttcaagcaattctcccacctcagcctcccgcgtagctgggattacaagcacc-cgccatcacgcccggcta--------atttttgtagagatggggtttcaccatgttgaccaggctggtcttgaactcctgacctcaggtgatccacccacctcggcctccc---aaggttgagattacaggcgtgagccaccgtgcctggccCACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56893516 286 + 60714840 ttttttttttttttgaaatggagtctttctctgttgcccaggctggagtgcaat-gcctgacctcagctcactgcaacttctgcctcccggtttcaagcaattctcccatctcagcctcc--cgtagctgggattacaggcacc-cgccatcacacccagcta--------atttttgtagagatggggtttcaccatgttgaccaggctggtcttgaagtcctgacctcaggtgatccacccacctcagcctccc---aaagttgagattacaggcatgagccaccgtgcctggccCACA i ponAbe2.chr19 T 4579 C 0 s nomLeu3.chr10 103373357 284 - 106955855 ttttttttttttttgagacagag----tctctgttgcccaggctggagtgcaat-gcctaacctcagctcactgcaacttttgcctcctggtttcaagcaattctcccacctcagcctcccgcgtagctgggattacaggcacc-cgccatcatgcccggcta--------atttttgtagagatggggtttcacaatgttgaccaggctggtcttgaactcctgacctcaggtgatccacccacctcggcctccc---aaagttgagattacaggcatgagccaccgtgcctggccCACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676163 282 + 64156825 Gtttttt-------gagacggagtctctctctgttgcccaggctggagtgcaat-gcctgacctcagctcactgcaacttctgcctcccggtttcaagcaattctcccacctcagcctctcgagtagctgggattacaggcaccgccccgtcatacccggcta--------atttttgtagagacggggtttcgccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccaccttggcctccc---aaagttgagattacaggcatgagccaccgtgcctggccCACA i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55817899 282 + 59248254 Gtttttt-------gagacggagtctctctctgttgcccaggctggagtgcaat-gcctgacctcagctcactgcaacttctgcctcccggtttcaagcaattctcccacctcagcctctcgagtagctgggattacaggcacccccccgtcatgcccggcta--------atttttgtagagacggggtttcgccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccaccttggcctccc---aaagttcagattacaggcatgagccaccgtgcctggccCACA i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47925850 279 + 51301725 ttttttt-------gagacaga--ctctctctgttgcccaggctggagtgcaat-gcctgacatcagctcactgcaacttctgcctcccggtttcaagcaattctcccacctcagcctcccgagtagctgggattacaggcacc-ccccatcatgcccggcta--------atttttgtagagacggggttttgccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccaccttggcctccc---aaagttgagattacaggcatgagccaccgtgcctggcccaca i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47629060 281 + 50890351 Gtttttt-------gagacggagtctctctctgttgcccaggctggagtgcaat-gcctgacctcagctcattgcaacttctgcctcccagtttcaagcaattctcccacctcagcctcccgagtagctgggattacaggcacc-ctccatcatgcccggcta--------atttttgtagagacggggtttcgccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccaccttggcctccc---aaagttgagattacaggcatgagccaccgtgcctggccCACG i chlSab2.chr6 I 1 C 0 s calJac3.chr22_GL285922_random 45455 298 + 138250 ttttttttttttttgagactgag--tctctctgttgtgcaggctggagtgcagtggtgtgatctcagctcactacaacttctgcttcccaggttcaagtgattcacctgcctcagcccccagagtagctgggataacaggcacc-tgctatcattcctggctaatttttgtatttttgtagagacagggtttccccatgttaaccaggctggtctcgaactcctgacctctggttatccacccacctcagcccccccaaaatgttgagattacaggcatgagccaccgtgcccggccCACA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I a score=7020.000000 s hg38.chr19_GL949747v2_alt 683126 4 + 729520 TTTT s panTro4.chr19 59950036 4 + 63644993 TTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56893802 4 + 60714840 TTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373641 4 - 106955855 TTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676445 4 + 64156825 GTTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818181 4 + 59248254 Gttt i macFas5.chr19 C 0 I 219 s papAnu2.chr19 47926129 4 + 51301725 gtta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629341 4 + 50890351 GTTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 45753 4 + 138250 TTTT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20092067 4 - 122678785 TTTT i canFam3.chr1 I 2803 C 0 a score=123300.000000 s hg38.chr19_GL949747v2_alt 683130 40 + 729520 TTAAAAAAGGGGCAACTGCAGTGTAGTAGAACAAAGTTGT s panTro4.chr19 59950040 40 + 63644993 TTTAAAAAGGGGCAACTGCAGTGTAGTAGAACAAAGTTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56893806 40 + 60714840 TTTAAAAAGGGGCAATTGCAGTGTAGTAGAACAAAGTTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373645 40 - 106955855 TTAAAAAAGGGGCAACTGCAGTGTAGCAGAACAAAGTTGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676449 40 + 64156825 TTTAAAAAGGGGCAACTGCAGTGTCGTAGGACAAAGTTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818404 40 + 59248254 TTTAAaaaggggcaactgtagtgtcgtagaacaaagttgt i macFas5.chr19 I 219 C 0 s papAnu2.chr19 47926133 40 + 51301725 TTTAAAAAGGGGCAACTGCAGTGTCATAGAACAAAGTTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629345 40 + 50890351 TTTAAaaaggggcaactgcagtgtagtagaacaaagttgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 45757 39 + 138250 TTTTAAAAGGGG-AACTGCAGTGTAGTGGAACAAAGCTGT i calJac3.chr22_GL285922_random C 0 M 552 s canFam3.chr1 20092071 32 - 122678785 TTAAAAAA--------CACAGTGTATAGAGACAAAGTTGT i canFam3.chr1 C 0 C 0 a score=48048.000000 s hg38.chr19_GL949747v2_alt 683170 20 + 729520 GACCAATGCTAGGATA-CTCT s panTro4.chr19 59950080 20 + 63644993 GACCAATGCTAGGATA-CTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56893846 21 + 60714840 GACCGATGCTAGGATACCTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373685 21 - 106955855 GACCAATGCTAGGATACCTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676489 21 + 64156825 GACCAATgctaggacacctct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818444 21 + 59248254 gaccaatgctaggacacctct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47926173 21 + 51301725 GACCAATGCTAGGACACCTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629385 21 + 50890351 gaccaatgctaggatacctct i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20092103 19 - 122678785 AGCCAAAACTGGAAGACCT-- i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 45796 552 + 138250 M a score=441965.000000 s hg38.chr19_GL949747v2_alt 683190 141 + 729520 GTTCATTTCCTGACCCAGCCATGAATACACTGGAATAACTCATGCAAA--ATGCCAGCTCGCTGGCCCCCCGTTTCCCCACCCAACAAATGAAGGGGCTCTTACAGGTTCCTTTTTGTCCTGAAATTCATCACCAATGCAAAT---------------------------------- s panTro4.chr19 59950100 141 + 63644993 GTTCATTTCCTGACCCAGCCATGAATACACTGGAATAACTCATGCAAA--ATGCCAGCTCGCTGGCCCCCCGTTTCCCCACCCAACAAATGAAGGGGCTCTTACAGGTTCCTTTTTGTCCTGAAATTCATCACCAATGCAAAT---------------------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56893867 143 + 60714840 GTTCATCTCCTGACCCAGCCATGAATACACTGGAATAACTCATGCAAAACATGCCACCTCGCTGGCCCCCCATTTCCCCACCCAACAAATGAAGGGGCTCTCACAGGTTCCTTTTTGTCCTGAAATTCATCACCAATGCAAAT---------------------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373706 142 - 106955855 GTTCATTTCCTGACCCAGCCATGAATACACTGGAATAACTCATGCAAAACACGCCACCTCGCTAG-CCCCCGTTTCCCCACCCAACAAATGAAGGGGCTCTCACAGGTTCCTTTTTGTCCTGAAATTCATCACCAATGCAAAT---------------------------------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676510 143 + 64156825 gttcatttcctgacccagccacgaatacactggaataactcaggcaaaatacaccacctcgctggccctccgcttccccacccaaccaatgaaggggctctcataggtccctttttgtcctgaaattcATCACCGATGCAAAT---------------------------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818465 143 + 59248254 gttcatttcctgacccagccacgaatacactggaataactcaggcaaaatacaccacctcgctggccctccgcttccccacccaaccaatgaaggggctctcataggtccctttttgtcctgaaattcATCACCGATGCAAAT---------------------------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47926194 142 + 51301725 GTTCATTTCCTGACCCAGCCACGAATACGCTGGAATAACTCAGGCAAAACACACCACCTCGCTAGCCCTCCACTT-CCCACCCAACCAATGAAGGGGCTCTCATAGGTCCCTTTTTGTCCTGAAATTCATCACCGATGCAAAT---------------------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629406 143 + 50890351 gttcatttcctgacccagccacgaatacgctggaataactcaggcaaaatacaccacctcgctagccctccgcttccccacccaaccaatgaaggggctctcataggtccctttttgtcctgaaattcATCACCGATGCAAAT---------------------------------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 46355 143 + 138250 GTCTATTTACTGACCCAGCCATGAATAAACTGGAATCACTCATACAAAACACTCCACTTTGCTGGCCCCTCATTTCCCCACCCAGCAAACCAAGGGGCTCTCATAGGTCCTTTTTTGTCCTGAAATTCATTACTGATACAAAt---------------------------------- i calJac3.chr22_GL285922_random M 552 I 302 s canFam3.chr1 20092122 176 - 122678785 ATTTATTTCCTGACCTAGCCAAGAAGGGAATAGAACATAATAACAGACAAACACCACCTCCCAGG-TCCCAGTTTTCCCAACCAAGAAATGAAGGGGCCCTCAGAGGTCACCAATTGCCCTGAAATTCATTTCTGAAGAGAAACCAGAGTATTGCTGAAATTCATTTCTGATGCAAT i canFam3.chr1 C 0 C 0 a score=177098.000000 s hg38.chr19_GL949747v2_alt 683331 56 + 729520 TTC-T---TAAAAATCCTTTGTCTGGCAGTCCA-TGCCTGTCCTTCAGCATTTCCCAGATC s panTro4.chr19 59950241 56 + 63644993 TTC-T---TAAAAATCCTTTGTCTGGCAGTCCA-TGCCTGTCCTTCAGCATTTCCCAGATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894010 56 + 60714840 TTC-T---TAAAAATCCTTTGCCTGGCAGTCCA-TGCCTGTCCTTCAGCATTTCCCAGATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373848 56 - 106955855 TTC-T---TAAAAATCCTTTGTCTGGCAGTCCA-TGCCTGCCCTTCAGCATTTCCCAGATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676653 57 + 64156825 TTCTT---AAAAAATCCTTTGTCTGGCAGTCCA-GGCCTGTCTTTCAGCACTTCCCAGATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818608 57 + 59248254 TTCTT---AAAAAATCCTTTGTCTGGCAGTCTA-GGCTTGTCTTTCAGCACTTCCCAGATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47926336 56 + 51301725 TTC-T---AAAAAATCCTTTGTCTGGCAGTCCA-GGCCTGTCTTTCAGCACTTCCCAGATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629549 57 + 50890351 TTCTT---AAAAAATCCTTTGTCTGGCAGTCCA-GGCCTGTCTTTCAGCACTTCCCAGATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 46800 56 + 138250 TTC-TTAAAAAAAATCCTTTGGCTGGCAGTCCA-TGCCTGCCCATCAG---TTCCCAGATC i calJac3.chr22_GL285922_random I 302 C 0 s canFam3.chr1 20092298 57 - 122678785 TTT-T---TAAACATTCTTAGTCTCATAGCCTACTGCCTGTCCCTCAGCATTTCCCAGATC i canFam3.chr1 C 0 I 349 a score=1560.000000 s hg38.chr19_GL949747v2_alt 683387 2 + 729520 TG s panTro4.chr19 59950297 1 + 63644993 -G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894066 1 + 60714840 -G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373904 1 - 106955855 -G i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676710 1 + 64156825 -G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818665 1 + 59248254 -G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47926392 1 + 51301725 -G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629606 1 + 50890351 -G i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 46856 1 + 138250 -C i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20092355 349 - 122678785 I a score=1079094.000000 s hg38.chr19_GL949747v2_alt 683389 303 + 729520 ACCCTCAGGACTCACCAAGACAGAAGAGGGCGGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGAGCTCTGTGGCCAGGG-AGGGAAGTGGTGGGAGCCTGGGGCACAGGCTCAGGATGTGATGAGGATGAAGAATGCTCTCCTCCCTTCCTCCACCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCGGCTCCTCAGTACAGTGACTTGCACACAAGCTCCAAGGAGCCGCGCTTATCTCCTCTGGCCAGCCTGGCGTTGCACCGTTTGTCCGCCTGCTGGGGCCTGG s panTro4.chr19 59950298 303 + 63644993 ACCCTCAGGACTCACCAAGACAGAAGAGGGCGGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGAGCTCTGTGGCCAGGG-AGGGAAGTGGTGGGAGCCTGGGGCACAGGCTCAGGATGTGATGAGGATGAAGAATGCTCTCCTCCCTTCCTCCACCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCGGCTCCTCAGTACAGTGACTTGCACACAAGCTCCAAGGAGCCACGCTTATCTCCTCTGGCCAGCCTGGCGTTGCACCGTTTGTCCGCCTGCTGGGGCCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894067 303 + 60714840 ACCCTCAGGACTCACCAAGACAGAAGAGGGCGGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGAGCTCTGTGGCCAGGG-AGGGAAGTGGTAGGAGCCTGGGGCACAGGCTCAGGATGTGATGAGGATGAAGAATGCTCTCCTCCCTTCCTCCGCCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCGGCTCCTCAGTACAGTGACTTGCACACAAGCTCCAAGGAGCCACACTTATCTCCTCTGGCCAGCCTGGCATTGTACCGTTCGTCCGCCTGCTGGGGCCTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373905 299 - 106955855 ACCCTCAGGACTCACCAAGACAGAGGAGGGCAGTCGGGGATGGAGACATGGTTCCTCAGC-----CCTGAGCTCTGTGGCCAGGGAAGGGAAGTGGTGGCAGCCTGGGGCACAGGCTCAGGATGTGATGAGGGTGAAGAATGCTCTCCTCCCTTCCCCCGCCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTCGCCGGCTCCTCAGTACAGTGACTTGCACACAAGCTCCAAGGAGCTGCGCTTATCTCCTCTGGCCAGCCTGGGGTTGTACCGTTCGTCCGCCTGCTGGGGCCTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676711 302 + 64156825 ACCCTCAGGACTCACCGAGACAGAAGAGGGTGGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGGGTTCTGTGGCCCGGG-AGGGAAGTGGTGGGAGCCT-GGGCACGGGCTCAGGATGTGATGAGGATGAAGAATGCTCTCCTCCCTTCCTCCGCCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCGGCTCCCCAGGACAGTGACTTGCACACAAGCTCCAAGGAGCTGCGCTTATCTCCTCTGGCCAGCCTGGCGTTGCACCGTTCGTCCGCCTGCTGGGGCCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818666 302 + 59248254 ACCCTCAGGACTCACCGAGACAGAAGAGGGTGGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGGGTTCTGTGGCCCGGG-AGGGAAGTGGTGGGAGCCT-GGGCACGGGCTCAGGATGTGATGAGGATGAAGAATGCTCTCCTCCCTTCCTCCGCCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCGGCTCCCCAGGACAGTGACTTGCACACAAGCTCCAAGGAGCCGCGCTTATCTCCTCTGGCCAGCCTGGCGTTGCACCGTTCGTCCGCCTGCTGGGGCCTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47926393 303 + 51301725 ACCCTCAGGACTCACCAAGACAGAAGAGGGCAGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGAGCTCTGTGGCCAGGG-AGGGAAGTGGGGGGAGCCTGGGGCACGGGCTCAGGATGTGATGAGGTTGAAGAatgctctcctcccttcctccgcCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCAGCTCCCCAGGACAGTGACTTGCACACAAGCTCCAAGGAGCCGCGCTTATCTCCTCTGGCCAGCCTGGCGTTGCACCGTTCGTCTGCCTGCTGGGGCCTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629607 302 + 50890351 ACCCTCAGGACTCACCAAGACAGAAGAGGGCGGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGAGCTCTGTGGCCAGGG-AGGGAAGTGGTGGGAGCCT-GGGCATGGGCTCAGGATGTGATGAGGATGAAGAATGCTCTCCTCCCTTCCTCCGCCAGCCCTGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCAGCTCCCCAGGACAGTGACTTGCACACAAGCTCCAAGGAGCCGCGCTTATCTCCTCTGGCCAGCCTGGCGTTGCACCATTCGTTCGCCTGCTGGGGCCTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 46857 303 + 138250 ACCCTCAGGACTCACCAAGACAGAAGAGGGCGGTCAGGGATGGAGACATGGTTCCTCGGCCCTGTCCTGAGCTCTGTGGCCAGGG-AGGGAAGTGGTGGGAGTCGGGGGCACAGGCTCAGGATGTGATGAGGATGAAGAATGCCCTCCTCCCTTCCTTCACCAGCCCCGGCCTTTCCTAATTGAGGCTCATCGAGCTGTAGCCGGCTCCTCAGTACTGTGACTTGCACACAAGCTCCAAGGAGGCTCGCTTATCTCCACCGGCCAGCCTGGCTCTGCACCACTCGTCTGCCCACTGGGGCCTGG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20092704 297 - 122678785 ATCCTCAGTACTCACCAAGACACAGAAGGGCAGGCAGGGATGGGGCCATGGTTCTTCAGCCC-ATCCAAAGCTCTGTAACCCAGG-AGGGAAGCTGCAGGGGCTG-GAGCAGAGACATCGGATGTGATGAGGATGCAGAGCCCTCTCCTCCCTTCCTGGATCTG-CCTGGCTTTTCCTAAGTGAGGATCATCAAGCTGGAGCCATGCCCTCAGTAGAGTGACTTGCACACAAGTTCACAGAAGCT-CATTTATCTTCTGTCACCAGCCTAGAGCCACACCAT--GTCTGCATCTTCAGGCATGG i canFam3.chr1 I 349 I 34018 a score=252942.000000 s hg38.chr19_GL949747v2_alt 683692 85 + 729520 TCTGTGTTCCCGTGCTCCCATAAACTCCCTGAT-Gtcactaggaaaatacgcatcaaaaccacagtgagatatgacttcacacctt s panTro4.chr19 59950601 85 + 63644993 TCTGTGTTCCCGTGCTCCCATAAACTCCCTGAT-Gtcactaggaaaatacgcatgaaaaccacagtgagatatgacttcacacctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894370 85 + 60714840 TCTGTGTTCCCGTGCTCCCATAAACtccctaat-gtcactaggaaaatacgcatcaaaaccacagtgagatatgacctcacacctt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103374204 85 - 106955855 TCTGTGTTCCCGTGCTCCCATAAACTCCCTGAT-Gtcactaggaaaatacgcatcaaaaccacagtgagatatgacttcacacctt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677013 85 + 64156825 CCTGTGTTCCCGTGCTCCCATAAACTCCCTGAT-Gtcgctaggaaaatactcatcaaaaccacagtgagatacgacttcacaactt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818968 85 + 59248254 CCTGTGTTCCCGTGCTCCCATAAACtccctgat-gtcgctaggaaaatactcatcaaaaccacagtgagatatgacttcacaactt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47926696 85 + 51301725 CCTGTGTTCCCGTGCTCCCATAAACTCCCTGAT-GTCGCTAGGAAAATActcatcaaaaccacagtgagatatgaCTTCACAACTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629909 85 + 50890351 CCTGTGTTCCCGTGCTCCCATAAACTCCCTGAT-Gtcgctaggaaaatactcatcaaaaccacagtgagatacgacttcacagctt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 47160 86 + 138250 GCTGTCCTCCCATGTTCCCATAAAGTCTCTGAtggtcgctaggaaaatgtacatcagaaccacagtgagatacgatttcacacttt i calJac3.chr22_GL285922_random C 0 I 1752 e canFam3.chr1 20093001 34018 - 122678785 I a score=395549.000000 s hg38.chr19_GL949747v2_alt 683777 185 + 729520 ctggaatggctgt-at-ttttttttttt-cttttgagacaaagtctcgttctttttgcccaggttggagtgcagtggcgccatctcggcccactacaacctccacctcccaggttcaagcgattctcctgcctcagcctcccaagtggctgggattataggtatg---t---accacaccaggctaatttttgt s panTro4.chr19 59950686 186 + 63644993 ctggaatggctgt-at-ttttttttttttcttttgagacaaagtctcgctctttttgcccaggctggagtgcagtggcgccatctcggcccactacaacctccacctcccaggttcaagcgattctcctgcctcagcctcccaagtggctgggattataggtatg---t---accacaccaggctaatttttgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894455 190 + 60714840 ctgggatggctgtaat-tttttttttttttttttgagacaaagtctcactctttttgcccaggctggagtgcagtggcgccatcttggctcactacaacctccacctcccgggttcaagcgattctcctgcctcagcctcccgagtggctgggattataggtatg---taccaccacgccgggctaatttttgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103374289 187 - 106955855 ctgggatggctgt-aa-ttttttttttttcttttgagac--agtctcgctctttttgcccaggctggagtgcagtggtggtatctcagctcactacaacctccacctcccaggttcaagcgattctcctgcctcagcctcccaagtggctgggattataggtatg---taccaccatgccgggctaatttttgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677098 182 + 64156825 ctgggatggctat-aa--------tttttttttccagacagagtctcgctctttttgcccaggctggagtgcagtggcgccatctcggcccactacaacctccacctcctgggttcaagtgattctccggcctcagcctcccgagtggctggggttataggtgtg---caccaccacgctgggctaatttttgt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55819053 189 + 59248254 ctgggatggctat-aa-ttttttttttttttttccagacagagtctcgctctttttgcccaggctggagtgcagtggcgccatctcggcccactacaacctccacctcctgggttcaagtgattctccggcctcagcctcccaagtggctggggttataggtgtg---caccaccacgctgggctaatttttgt i macFas5.chr19 C 0 I 1042 s papAnu2.chr19 47926781 189 + 51301725 CTgggatggctat-aa----tttttttttttttccagacagagtctcgctctttttgcccaggctggagtgcagtggcgccatctcggcccactacaacctccacctcctgggttcaagtgattctgcagcctcagcctcccaaatggctggggttataggtatgtaccaccaccacgccgggctaatttttgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629994 179 + 50890351 ctgggatggctat-aatttttttttttttttttccagaaagagtctcgctcttcttgcccaggctggagtgcagtggcgccatctcggcccactacaacctccacctcctgggttcaagtgattctgcagcctcagcctcccaaatggctggggttataggtgtg---caccaccaca------taact----- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I a score=102285.000000 s hg38.chr19_GL949747v2_alt 683962 61 + 729520 atttttagtagagatggggtttcactgtgttggccaggctggtcttgaactcctgacctca s panTro4.chr19 59950872 61 + 63644993 atttttagtagagatggggtttcactgtgttggccaggctggtcttgaactcctgacctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894645 61 + 60714840 atttttactaaagatggggtttcactatgttgcccaggctgatcttgaactcctgacctca i ponAbe2.chr19 C 0 I 4561 s nomLeu3.chr10 103374476 61 - 106955855 atttttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctgacctca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677280 61 + 64156825 atttttagtatagatggggtttcaccacattggccaggctggtcttgaactccgcacttca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47926970 61 + 51301725 atttttagtagagatggggtttcaccacattggccaggctggtcttgaactccgaacttca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47630173 61 + 50890351 atttttagtagagatggagtatcaccacattggccaggctggtcttgaactccgaacttca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e macFas5.chr19 55819242 1042 + 59248254 I a score=571041.000000 s hg38.chr19_GL949747v2_alt 684023 464 + 729520 gttgatccacctgcctcggtctcccaaagtgctgggattacaggcatgagccactgcacccgaccggctataa--ttttttttaatggaaaacagcagatattggtgagtatgcagagaaattgaactgcgcgtgcattgctggcagggacgtaacatggcgcccctgctgtggaaaacagttccagcagctcctccagaagttaaacgtgggattgccataaaatccagcaattccacttcggggtacacacctaaaagaactgaaaacagggtctctaac--atatttgtaca-cagtgttcatagcagctttattcacaatagccaaaaggtgaaaccacccacatgtccatcaacaacaatggataaacaacatgtggtatatacacacaaggtaatatcaaccagccttaactaaaagaataaaaatcagccaggcacagtggctcacgcctgtaatcccagca s panTro4.chr19 59950933 464 + 63644993 gttgatccacctgccttggtctcccaaagtgctgggattacaggcatgagccactgcacccgaccggctataa--ttttttttaatgtaaaatagcagatattggtgagtatgcagagaaattggactgcgcgtgcattgctggcagggacgtaacatggcgcccctgctgtggaaaacagttccagcagctcctccagaagttaaacgtgggattgccataaaatccagcaattccacttcggggtacacacctaaaagaactgaaaacagggtctctaac--atatttgtaca-cagtgttcatagcagctttattcacaatagccaaaaggtgaaaccacccacatgtccatcaacaacaatggataaacaacatgtggtatatacacacaaggtaatatcaaccagccttaactaaaagaataaaaatcagccaggcacagtggctcacgcctgtaatcccagca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103374537 464 - 106955855 gttgatccgcctgcctcggcctcccacagtgctgggattataggcataagccaccgcacccgaccggctgtaa--ttttttttaatggaaaatagcaaatattggtgagtatgcagagaaattggaccgcgcgtgcattgctggcagggacgtaacatggtgcccctgctgtggaaaacagttttagcagctcctccaaaaggcaaacatggaattgccataaaatccagcaattccacttctgggtatacacctaaaagaattgaaaacagggtctctaacagatatttgtacaccagcgttcataacagctttattcacaatagccaaaaggtgaaaccaaccaaatgtccat---caacaatggataaacaacatgcagtatatacacacaaggtaatatcaaccagccttaactaaaagaataaaaatcagccaggcacagtggctcacacctgtaatcccagca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677341 465 + 64156825 ggtgatccgcccacattggcctcccagagggctggtattacaggcatgagccactgcgcccgaccagctataa--ttttttttaatggaaaacagcaaacgttggtgagtatgcagagaagttggactgcgcgtgccttgctggtggggacataacatggtgccactgctgtggaaaacagttttagcagctcctccaaaagttaaacgtgggattgccgtaaaatccagcaattccacttctgcgtatacacctaaaagaatcgaaaacaggatctcgaac--atatttgtacaccagtgttcctagcagctttattcacaatagccaagaggtgaaaccagccaaatattcatcaacaacaatggataaacaacgtgcggtatatacagacaaggtaacatcaaccaaccttcattaaaagaataaaaatcAgccgggcgcggtggctcacgcctgtaatcccagca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47927031 466 + 51301725 ggtgatctgcccacatcagcctcccaaaaggctgggattacaggcatgagccactgcgcccgaccagctataa-tttttttttaatggaaaatagcAAACGTTGGTGAGTATGCAGAGAAGTTGGACTGCGCGTGCCTTGCTGGCGGGGACATAACATGGTGccactgctgtggaaaacagttttagcagCTCCTCCAAAAGTTAAACGTGGGATTGCCGTAaaatctagcaattccacttctgggtatacacctaaaagaattgaaaacaggatctCGAAC--ATATTTGTACAccagtgttcatagcagctttattcacaatagccaagaggtgaaaccagccaaatatccatcaacaacAATGGATAAACAACATGTGGTATATACAGACAAGGTAATATCAACCAGCcttcattaaaagaataaaaatcagccaggcgcggtggctcacgcctgtaatcccagca i papAnu2.chr19 C 0 I 140 s chlSab2.chr6 47630234 466 + 50890351 ggtgatctgcccacatcggcctcccaaagggctgggattacaggcatgagccactgcgcccgaccagctataattttttttttaatggaaaatagcaaacgttggtgagtatgcagagaagttggactgcgcgtgcattgctggcggggacataacatggtgccactgctgtggaaaacagttttagcagctcctccaaaagttaaacgtgggattgccataaaatccagcagttccacttctgggtatacacctaaaagaattgaaaacaggatctcgaac--atatttgtacaccagtgttcatagcagctttattcacaatagccaagaggtgaaaccagccaaata-ccatcaacaacaatggataaacaacatgcggtacatacagacaaggtaatatcaaccagccttcattaaaagaataaaaATCAgccgggcgcggtggctcacgcctgtaatcccagca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56894706 4561 + 60714840 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e macFas5.chr19 55819242 1042 + 59248254 I a score=72901.000000 s hg38.chr19_GL949747v2_alt 684487 83 + 729520 ctttgggaggccgaggcgggcggatcacctgaggtcaggagtccgagaccagcctggttaacatggtgaaaccccatctctac s panTro4.chr19 59951397 83 + 63644993 ctttgggaggccgaggcgggtggatcacctgaggtcaggagtccgagaccagcctggttaacatggtgaaaccccatctctac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103375001 83 - 106955855 ctatgggaggccgaggcgtgtggatcacctgaggtcaggagttcgagaccagcctggttaacatggtgaaaccccgtctctac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677806 83 + 64156825 ctttgggaggctgaggcgggtggatcacttgagatcaggagttcgagaccagcctggttaacatggtgaaaccccatctctac i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47630700 83 + 50890351 ctttgggaggctgaggcgggtggatcacttcaggtcaggagtttgagaccagcctggttaacatggtgaaaccccatctctac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56894706 4561 + 60714840 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e papAnu2.chr19 47927497 140 + 51301725 I e macFas5.chr19 55819242 1042 + 59248254 I a score=114397.000000 s hg38.chr19_GL949747v2_alt 684570 90 + 729520 taaaaatacaaaaa-ttagctgggcgttaaattagccgggcatggtggcaggtgcctgtaatcccagctacttgggagacggaggcatgag s panTro4.chr19 59951480 90 + 63644993 taaaaatacaaaaa-ttagctgggcgttaaattagctgggtatggtggcgcacacctgtaatcccagctacttgggagacggaggcatgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56899267 91 + 60714840 TAAAAATACAAAAATTTAGCTGGGCGTTaaattagccaggcatggtggcgcacacctgtaatcccagctacttgggagacggaggcatgag i ponAbe2.chr19 I 4561 C 0 s nomLeu3.chr10 103375084 90 - 106955855 taaaaatacaaaaa-ttagctgggcgttaagttagctgggcatggtggcgcgcgcctgtaatcccagctacttgggagacagaggcatgag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677889 90 + 64156825 taaaaatacaaaag-ctagctgggtgttaaattagccgggcatggtggcacacacctgtaatcccagctacttgggagatggaggcatgag i rheMac3.chr19 C 0 I 2 s chlSab2.chr6 47630783 90 + 50890351 taaaaatacaaaaa-ttagctgggcattaaattagccgggcatggtggcacacgcctgtaatcccagctacttgggagatggaggcatgag i chlSab2.chr6 C 0 I 2 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e papAnu2.chr19 47927497 140 + 51301725 I e macFas5.chr19 55819242 1042 + 59248254 I a score=114386.000000 s hg38.chr19_GL949747v2_alt 684660 211 + 729520 aatcgcttgaacctgggaggcagagattgcggtaagccgagatcgcaccactgcactccagcctgggcggcagagtgagactgtctcaaaaataaaaataaggccgggcgtggtggcccatgcctgtaatcctagtactttaggaggctgaggcaggcagattgcctgagctcagcagttcaagaccagcctgggcaacacagtaaaaccc s panTro4.chr19 59951570 211 + 63644993 aatcgcttgaacctgggaggcggagattgcggtaagccgagatcgcaccactgcactccagcctgggcggcagagtgagactgtctcaaaaataaaaataaggccgggcgtggtggcccatgcctgtaatcctagtactttgggaggctgaggcaggcagattgcctgagctcaggagttcaagaccagcctgggcaacacagtaaaaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56899358 211 + 60714840 aatcgcttgaacctgggaggcggaaatcgcggtaagccgagatcgcaccactgcactccagcctgggcgacagagtgagactgtctcaaaaataaaaataaggccgggcgcggtggctcatgcctgtaatcctagtactttgggaggccgaggcaggcagattgcctgagctcaggagttcaagaccagcctgagcaacacggtaaaaccc i ponAbe2.chr19 C 0 I 10 s nomLeu3.chr10 103375174 211 - 106955855 aatcgcttgaacctgggaggcggagattgcggtaagccgagatcgcaccactgcactccagcctgggcgacagagtgagactctctcaaaaataaaaataaggctgggcgcggtggctcatgcctgtaatcctagtactttgggaggccgaggcaggcagattgcctgagctcaggagttcaagcccagcctaggcaacacggtaaaaccc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e chlSab2.chr6 47630873 2 + 50890351 I e papAnu2.chr19 47927497 140 + 51301725 I e macFas5.chr19 55819242 1042 + 59248254 I e rheMac3.chr19 60677979 2 + 64156825 I a score=-1192.000000 s hg38.chr19_GL949747v2_alt 684871 4 + 729520 -----ccaa s panTro4.chr19 59951781 4 + 63644993 -----aaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103375385 8 - 106955855 cgtctcta- i nomLeu3.chr10 C 0 I 2 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56899569 10 + 60714840 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e chlSab2.chr6 47630873 2 + 50890351 I e papAnu2.chr19 47927497 140 + 51301725 I e macFas5.chr19 55819242 1042 + 59248254 I e rheMac3.chr19 60677979 2 + 64156825 I a score=300726.000000 s hg38.chr19_GL949747v2_alt 684875 607 + 729520 aaaatacaaaaaaaaaa---tagccgggcatggcggcaggcacctgtagtcccagctactccggaggctgagacaggagaatggcttgaacccgggacgcggaagttgcggtgagccgagatcgcgccattgcactccagcctgggtgacagagcgagattctgtctccaa---------aaaataaaaaatattataaaagaat-aaattcagatacatgctacaacgtgatggaccttgaagacattatgctaaaggaaatattccggacttgacagataaatactgcattgtgccgcttatctgaggtatcgagaggagtcaaattcatagagacagggattagaatggtggttgccaaggcctgggaaaagtggggagttactatttaatagggagcgcttaggttgaagatgatgacaaagtctgggggatccatagtgg-tgatggttacacaacactgtaaatgtatttatatttaatgccattgactgttttttgttttttggttttttgagacggagtctcactctgtcgccgaggctggagtgcagtggcgcgatcttggctcaccgcaacctccgcctcccaggttcaagcgattctcctgcctcagcct s panTro4.chr19 59951785 611 + 63644993 aaaatacaaaaaaaaaaaaatagccgggcatggcggcaggcacctgtagtcccagctactccggaggctgagacaggagaatggcttgaacccgggacgcggaagttgcggtgagccgagatcgtgccattgcactccagcctgggtgacagagcgagattctgtctccaa---------aaaataaaaaatattataaaagaat-aaattcagatacatgctacaacgtgatggaccttgaagacattatgctaaaggaaatattccggacttgacagataaatactgcattgtgccgcttatctgaggtatcgagaggagtcaaattcatagagacagggattagaatggtggttgccaaggcctgggaaaagtggggagttactatttaatagggagagcttaggttgaagatgatgagaaagtctggggtatccatagtgggtgatggttacacaacactgtaaatgtatttatatttaatgccattgactgttttttgtttttttgttttttgagacggagtctcgctctgtcgccgaggctggagtgcagtggcgcgatctcggctcaccgcaacctccgcctcccaggttccagcgattctcctgcctcagcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56899579 605 + 60714840 gaaatacaaaaaaaa-----tagccgggcatggtggcaggcacctgtagt-ccagctactccggaggctgagacaggagaatggcttgaacccgggaggcagaagttgcagtgagccgagatcgtgccattgcactccagcctgggtgacagagcaagattctgtctccaaaaataaaataaaataaaaaatattataaaagaataaaattcagatacatgctacaacgtaatggaccttgaagacattatgctaaaggaaatattccagacttgatggataaatactgcattgttccacttatctgaggtatcgagaggagtcaaattcataaagacagggattagaatggtggtgg-caaggcctgggaaaagtggggagttgctatttaatagggagagcttaggttgaaggtgatgagaaagtctggggtatccacagtgg-tgatggttacacaacactgtaaatgtatttatatttaatgccattgactgtttttt--------gttttttgagacagagtctcactccgtcgccgaggctggagtgcagtggcgcgatcttggctcactgcaacctctgcctcccaggttcaagcgattctcctgcctcagcat i ponAbe2.chr19 I 10 C 0 s nomLeu3.chr10 103375395 603 - 106955855 gaaatacaaaaaaaa-----tagccgggcatggcggcaggcacctgtagtcccagctactccggaggctgagacaggagaatggcttgaacccgcgaggcggaagttgcagtgagccgagatcgcgccactgcactccagcctgggtgacagagctagattctgtctccaa-----aaataaaataaaaaatattataaaagaataaaattcagatacgtgctacaacatgatggaccttgaagacattacgctaaaggaaataatccagatttgacggataaatactgcattgttccacttatttgcggtatcgagaggagtcaaactcatagagacagggattagcatggtggttgccagggtctgggaaaagtggggcgttactatttaatagggggagcttaggttgaagatgatgat-aagtctgaggtatccatagtgg-tgatggttacacagcactgtaaatatatttatatctaatgccattgactgttttttgtt------ttttttgagacggagtctcgctctgtcgccgaggctggagtgcagtggcgtgatcttggctcaccacaacctccgcctcccaggttcaagcgattctcctgtctcagcat i nomLeu3.chr10 I 2 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e chlSab2.chr6 47630873 2 + 50890351 I e papAnu2.chr19 47927497 140 + 51301725 I e macFas5.chr19 55819242 1042 + 59248254 I e rheMac3.chr19 60677979 2 + 64156825 I a score=1745086.000000 s hg38.chr19_GL949747v2_alt 685482 766 + 729520 cctgagtagctgggactacaggtgcgtgccaccatgcctagttgattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatct--cctgaccttgtgatttggcctcccaaagtgctgggaatacaggcatgagccaccgcgcccggccagtgccgttgacttgtatgtgcacttacaggtggttaaaatgagaactatcagggtgttgatatct-AAAAACCTCCCTGCCATCATCTTCCCTACATCTC----TCATTCAGTGACCATGGTTGAATGCCTGCCACCTTTCAAATATTATGTCAGGCACTCAGTATTGGCAGTTTTATCCATTATaaatgctttaagctgcatagaattttaaacgtgttaataaaagtagttataaatctttaatacataagctggctttaaaattattggtaaaataagattagaaatgtcttaagaattgttggcgtttttgtttgcacttattgaacgagtggtttcatgcttatccctgcagaatactatgagatttgtcataagggttataaaactataaacccggctgggcgtggtggctcacgcctgtaatcccaacactctgggaggccgaggcaggcagatc-acctgaggtcgggagtttgagaccagcctgaccaacatggagaaacgccatctctactaaaaatacaaaattagctgggtgtggtggcgcatgcctgtaatcccagatactcaggaggctgaggcaggagaatcgcttga s panTro4.chr19 59952396 764 + 63644993 cctgagtagctgggactacaggtgcgcgccaccatgcctagttgattttttgtatttttagtacagacggggtttcatcgtgttagccaggatggtctcgatct--gctaaccttgtgatttggcctcccaaagtgctgggaatacaggcatgagccaccgcgcccggccagtgccgttgacttgtatgtgcacttacaggtggttaaaatgAGGACTATCAGGGTGTTGATATCT-AAAAACCTCCCTGCCATCATCTTCCCTACATCTC----TCATTCAGTGGCCATGGTTGAATGCCTGCCACCTTTCAGATATTATGTCAGGCACTCAGTATTGGCAGTTTTATCCATTATAAATGCTTTAAGCTGCATAGAATTTTAAACGC--TAATAACAGTGGTTATaaatctttaatacataagctggctttaaaattattggtaaaataagattagaaatgtcttaagaattgttggcgtttttgtttgcacttattgaacaagtggtttcatgcttatccctgcagaatactatgagatttgtcataagggttataaaactataaacccggctgggcgtggtggctcacgcctgtaatcccaacactctgggaggccgaggcaggcagatc-acctgaggtcgggagtttgagaccagcctgaccaacatggagaaacgccatctctactaaaaatacaaaattagctgggtgtggtggcacatgcctgtaatcccagatactcaggaggctgaggcaggagaatcgcttga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56900184 763 + 60714840 cctgagtagctgggactacaggtgcgtgccaccatggctagttaattttttgtatttttagtagagacaggatttcaccgtgttacccaggattgtcttgatct--cctgaccttgtaatttggcctcccgaagtgctgggaatacaggcgtgagccaccgtgcctggccaatgccattgacttgtatgtgcacttacaagtagttaaaattataaatATCAGAGTGTTGATATCT-AAAAACCTCCCTGCCATCATCTTCCCTACATCTC----TAGTTCAGT-ACCATGGTTGGATGCCTGCCACCTTTCAAATATTATGTCAGGCACTCAGTATCAGCAGTTTTATCAATTAAAAATGCTTTAAGCTGCATAGaattttaaacgt--taataacagtggttataaatctttaatacataagctggctttaaaattattggtaaaataagattagaaatgtcttaagaattgttggtgtttttgtttgcatgtattgaacaagtggtttcatgcttatccctgcagaataccatgagatttgccataagggttataaaactataaaccTggctgggcgcggtggctcacgcctgtaatcccaacactttgggaggccgaggcaggtggatc-atctgaggttgggagttcgagaccagcctgaccaacatggagaaacgctgtctctactaaaaatacaaaattagttgggcgtggtggcgcatgcctgtaatcccagatactcaggaggctgaggcaggagaatcgcttga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103375998 761 - 106955855 cctgagtagctgggactacaagtgcgtgccaccatgctgagttgattttttgtatttttagtaaagatggggtttcaccgtgttagccaggatggtctcgatct--cctgaccttgtgatttggcctcccaaagtgctgggaatacaggcatgagccaccgcgcccggccaatgccattgacttgtatgtgcacttacaagtggttaaaatgataaat---AGGGTGTTGATATCT-AAAAACCTCCCTGCCATCATCTCCCCTACATCTC----TAATTCAGTGACCATGGCTGAATGCCTGCCACCTTTCAAATGTTATGTCAGGCGCTCAGTATCGGCAGTTTTATCAATTATAAATGCTTCAAGCTGCATAGAACTTTAAACGT--TAATAACAGTGGTTATaaatctttaatacataagctggctttaaaattattggtaaaataagattagaaatgtcttaagaatcgttggcatttttgtttgcatttattgcacaagtggtttcatgcttatccctgcagaatactatgagattggtcataagggttagaaaactataaaccTggcttggcgcagtggctcatgcctgtaatcccaacactttgggaggccgaggcaggtggatc-acctgagatcgagagttcgaggccagcctgaccaacagggagaaacgccgtctctactaaaaatacaaaatcagctgggcgtggtggcgcatgcctataattccagatactcaggaggctgaggcaggagaatcgcttga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677981 769 + 64156825 cctgagtagctgggactacaggctcccgccaccatgcctggctaattttttgtatttttagtagagacggggtttcaccgcattaggtaggatggtctcgatctaccctgaccttgtgattcggcctcccaaagtgctgggattacaggcgtgagccaccgcacctggccaatgccattgactcgtatgtgcacttccaagtggttaaaatgataaatatcagggtgtttatatctAAAAACCCTCCCTGACATCATCTTCTCTACGTCTCCGATTAACTCAGCGACCGTGGCTGAATGCCTGCCACCTTTCAAATGTTAGGTCAGGTACTCAGTATCGGCAGTTTTATCAATTATAAATGCTTTAAGCTGCATAGaattttaaac-----aataacagtggttataaatctttaatacaaaagctggctttaaaattattggtaaaataagattagaaatgtcttaagaattgttagcgtttctgtttgcatttattgaacaagtggttttgtgcttatccctgcagaatactatgagatttgccacaagggttataaaactataaactcggccgggcacagtggcttacgcctgtaatcccaacactttgggaggctgaggcgggtggatcaacctgaggttgggagttcgagaccagcctgaccaacatggaaaaatcccatctctaccaaaaatgcaaaattcgccgggcatggtagcgcgcgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttga i rheMac3.chr19 I 2 M 160 s macFas5.chr19 55820284 771 + 59248254 cctgagtagctgggactacaggctcccgccaccatgcctggctaattttttgtatttttagtagagacggggtttcaccacattaggtaggatggtctcgatctaccctgaccttgtgattcggcctcccaaagtgctgggattacaggcgtgagccaccgcacctggccaatgccattgactcgtatgtgcacttccaagtggttaaaatgataaatatcagggtgtttatatctAAAAACCCTCCCTGACATCATCTTCTCTACGTCTCCGATTAACTCAGCGACCGTGGCTGAATGCCTGCCACCTTTCAAATATTAGGTCAGGTACTCAGCATCAGCAGTTTTATCAATTATAAATGCTTTAAGCTGCATAGAATTTAAAACGT--TAGTAACAGTGGCTATaaatctttaatacaaaagctggctttaaaattattggtaaaataagattagaaatgtcttaagaattgttagcgtttctgtttgcatttattgaacaaatggttttgtgcttatccctgcagaatactatgagatttgccataagggttataaaactctaaaGTCGAGcgggcacggtggcgtacgcctgtaatcccaacactttgggaggccgaggcaggcggatc-atctgaggttgggagttcgagaccagcctgaccaacatggagaaatcccatctctaccaaaaatgcaaaattagccgggcgtggtggtgcgtgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttga i macFas5.chr19 I 1042 C 0 s papAnu2.chr19 47927637 770 + 51301725 cctgagtagctgggactacaggctcccgccaccatgcctggctagttttttgtatttttagtagagatggggtttcaccgtgttaggtaggatggtctcgatctaccctgaccttgtgattcggcctcccaaagtgctgggattacaggtgtgagccaccgcacctggccaatgcCATTGACTCGTATGTGCACTTCCaagtggttaaaatgataaatatcagGGTGTTTATATCT-AAAACCCTCCCTGACATCATCTTCTCTACATCTCCGATTAACTCAGCGACCGTGGCTGAATGCCTGCCACCTTTCAAATATTAGGTCAGGCACTCGGTATCGGCAGTTTTATCAATTATAAATGCTTTAAGCTGCATAGAATTTTAAACGT--TAATAATAGTGGTTATAAATCTTCAATACAAAAGCtgactttaaaattattggtaaaataagattagaaatgtcttaagaattgttAGCGTTTCTGTTTGCATTTATTGAACAAGTGGTTTTGTGCTTATCCCTGCAGAATACTATGAGATTTGCCATAAgggttataaaactataaactcagccgggcacagtggctcacgcctgtaatcccaacgctttgggaggctgaggtgggcggatc-acctgaggttgggagttcgagaccagcctgactaacatggagaaatcccatctctaccaaaaatgcaaaattagctgggcatggtggcgcgtgactgtaatcccagctactcaggaggctgaggcaggagaatcgcttga i papAnu2.chr19 I 140 C 0 s chlSab2.chr6 47630875 770 + 50890351 cctgagtagctgggactacaggctcccgccaccatgcctggctaattttttgtatttttagtagagatggggtttcaccgtgttaggtaggatggtctcgatctaccctgaccttgtgattcggcctcccaaagtgctgggattacaggcgtgagccaccgcacctggccAATGCCATTGACTCGTATGTGCACTTCTAAGTGGTTAAAATGATAAATATCAGGGTGTTTATATCT-AAAACCCTCCCTGACATCATCTTCTCTACGTCTCCGATTAACTCAGCGACTGTGGCTGAACGCCTGCCACCTTTCAAATATTAGGTCGGGCACTCAGTATCGGCAGTTTTATCAATTATAAATGCTTTAAGCTGCATAGaattttaaacgt--taataacagtggttataaatctttaacacaaaagctggctttaaacttattggtaaaataagattagaaatgtcttaagaattgttagcgtttctgtttgcatttattaaacaagtggttttgtgcttatccctgcagaatactatgagatttgccataagggttataaaactataaactcaAccgggcacagtggcttacgcctgtaatcccaacactttgggaggccgaggcaggcggatc-acctgaggttgggagttcgagaccagcctgaccaacatggagaaatcccatctctaccaaaaatgcaaaattagctgggcatggtggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttga i chlSab2.chr6 I 2 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I a score=249334.000000 s hg38.chr19_GL949747v2_alt 686248 179 + 729520 acccgggaggcagaagttgcagtgagccgagattgcgccactgcactccagcctgggcaacaagagtgaaactccatctaaaat-aaataaaaata------aaaCATTtgttttttgtagagttgggg--tttcactatgttgcccaggctggtctt-gaactcctcctgggctcaagcaatccaccg s panTro4.chr19 59953160 170 + 63644993 acctgggag-----------------ccgagattgcgccactgcactccagcctgggcaacaagagtgaaactccatctaaaat-aaataaaaatagaaataaaaCATTtgttttttgtagagttggggggtttcactatgttgcccaggctggtctt-gaactcctcctgggctcaagcaatccaccg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56900947 177 + 60714840 acccgggaggcagaagttgcagtgagccaagattgcgccactgcactccagcctgggcaacaagagcgaaactccgtctaaaataaaataaaaata------aaaaaaTTGCtttctgtagagttgggg--tttcactacgttgcccaggctgctctt-gaa---ctcctgggctcaagcaatcctccg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103376759 175 - 106955855 acccgggaggcagaggttgcggtgagctgagattgcaccactgcactccagcctgggcaagaagagcgaaactctatcta-----aaaaaaaatta------aaaaaaCtgttttttgtagagttaggg--tttcactatgttgcccaggctggtctt-gaactcctcctgggctcaagcaatctgccg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55821055 172 + 59248254 acccaggaggcggaggttgcagtgagccgagattgcgccactgcactccagcctgggcaacaagagcaaaactccgtctaaaaa-aaaaaaaa---------aaaaaaaaGTGttttgtagaggtggt---tttcactatgttgcccaggctggtctt-gaa---ctcctaggctcaagcaatccactg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47928407 168 + 51301725 acccgggaggcggaggttgcagtgagccgagattgcgccactgcactccagcctgggcaacaagagcaaaactccatct------aaaaaaaa---------aaaaattgtttttttgtagagttggt---tttcactatgttgcccaggctggtcttggaa---ctcctaggctcaagcaatccgctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47631645 172 + 50890351 acctgggaggcggaggttgcagtgagccgagattgcgccactgcactccagcctgggcaacaagagcaaaactccgtcttaaaa-aaaaaaaa---------aaaaaaTGTttttttgtagagttggt---tttcactatgttgcccaggctggtctt-gaa---ctcctaggctcaatcaatccgctg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e rheMac3.chr19 60678750 160 + 64156825 M a score=103032.000000 s hg38.chr19_GL949747v2_alt 686427 42 + 729520 acctcagcctcccaaagtgctgggattacaagtgtgagccac s panTro4.chr19 59953330 42 + 63644993 acctcagcctcccaaagtgctgggattacaagtatgagccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56901124 42 + 60714840 acctcggcctcccaaagtgctgggaatacaggtgtgagccac i ponAbe2.chr19 C 0 I 16 s nomLeu3.chr10 103376934 42 - 106955855 acctcagcctcccaaagtgctgggattacaagtgtgagccac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60678910 42 + 64156825 Acctcagcctcccaaagtgctgggattgcaggtgtgagctac i rheMac3.chr19 M 160 C 0 s macFas5.chr19 55821227 42 + 59248254 acctcagcctcccaaagtgctgggattgcaggtgtgagctac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47928575 42 + 51301725 acctcagcctcccaaagtgctgggactgcaggtgtgagctac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47631817 42 + 50890351 acctcagcctcccaaagtgctgggattgcaggtgtgagctac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I a score=24788.000000 s hg38.chr19_GL949747v2_alt 686469 16 + 729520 tgtgcctggccCTATT s panTro4.chr19 59953372 16 + 63644993 tgtgcctggccCTATT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103376976 16 - 106955855 tgtgcctgaccCTACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60678952 16 + 64156825 tgtgcctgtccCCACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55821269 16 + 59248254 tgcgcctggccCCACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47928617 16 + 51301725 tgcgcctggccccact i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47631859 16 + 50890351 tgcgcctggccACATT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56901166 16 + 60714840 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I a score=320686.000000 s hg38.chr19_GL949747v2_alt 686485 163 + 729520 GGGTCCTTTT-AAAAGATACAT--AAAAAATCAAATGCAACAGTG------AAGTCAATCACCCGATGGCAGAAATTggggtgctcctggcatgtggtcggtcgaagccaaggacactgctcagcattctgcagtgcacaggacggccccgcccaggcggagaatgatccgg s panTro4.chr19 59953388 164 + 63644993 GGGTCCTTTTTAAAAGATACAT--AAAAAATCAAATGCAACAGTG------AAGTCAGTCACCCGATGGCAGAAATTggggtgctcctggcatctggtcggtcgaagccaaggacactgctcagcattgtgcagtgcacaggacggccccgcccaggcggagaatgatccgg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103376992 164 - 106955855 GGGTCCTTTTTAAAAGATACAT--AAAAAATCAAATGCAACAGTG------AACTCAGTCATCCGATGGCAGAAATTggggtgctcctggcatctggtcggttgaagccaaggacactgctcagcattctgcagtgcacaggacggccccgcccaggcagggaatgatccgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60678968 171 + 64156825 GCGTCCTTTTTTAAAGATACATGAAAAGAATCAAACGCAACAGTGAAGGT-AAGTCAGTCACCCGATGGCAGAAATTggggtgcctctggcgtctggtcagttgaagccaaggacactgctcagcattcttcaatgcacaggacagccccaccatggcagagaatgatccgg i rheMac3.chr19 C 0 I 1315 s macFas5.chr19 55821285 171 + 59248254 GGGTCCTTTTTTAAAGATACATGAAAAGAATCAAACGCAACAGTGAAGGT-AAGTCAGTCCCCTGATGGAAGAAATTggggtgcctctggcgtctggtcagttgaagccaaggacactgctcagcattcttcaatgcagaggacagccccaccacggcagagaatgatccgg i macFas5.chr19 C 0 I 7 s papAnu2.chr19 47928633 171 + 51301725 GGGTCCTTTCTTAAAGATACATGAAAAGAATCAAACGCAACAGTGAAGGT-AAGTCAGTCCCCCGATGGCAGAAATTGGGGTGCCTCTGGCATCTGGTCAGTTGAAGCCAAGGACACTGCTCAGCATTCttcaatgcacaggacagccccaccGCGGCAGAGAATGATCCGG i papAnu2.chr19 C 0 I 7 s chlSab2.chr6 47631875 171 + 50890351 GGGTCCTTTTTAAAACATACATGAAAAGAATCAAACACAACAGTGAAGGT-AAGTCAGTCACCCGATGGCAGAAATTggggtgcctctggcatctggtcagttgaagccaaggacactgctcagcattcttcaatgcacaggacagccccaccacggcagagaatgatccgg i chlSab2.chr6 C 0 I 7 s calJac3.chr22_GL285922_random 48998 148 + 138250 gggt--ttttTTAAAGACACATAAAAAGAATCAAATGTGACAGTTAAGGTCAAGTCGATCACCCAACGCCAGAAATCggggtgctcctgacatctggtgggttgaagcc-agaacaccattcaacattctgaaat-cacaggacggccccGG-------------------- i calJac3.chr22_GL285922_random I 1752 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56901166 16 + 60714840 I a score=47517.000000 s hg38.chr19_GL949747v2_alt 686648 43 + 729520 TGACACATATAGGTGGGAAGGATGCACGAATGATGGCGTTTAG s panTro4.chr19 59953552 43 + 63644993 TGACACATGTAGGTAGGAAGGATGCACGAATGATGGCGTTTAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103377156 43 - 106955855 TGACACATGTAGGTGGGAAAGATGCACGAATGATGGCATTTAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55821463 32 + 59248254 TGACACATGTAGGTG-----------TGATTGATGGCATTTAG i macFas5.chr19 I 7 I 306 s papAnu2.chr19 47928811 32 + 51301725 TGACACATGTAGGTG-----------TGATTGATGGCATTTAG i papAnu2.chr19 I 7 C 0 s chlSab2.chr6 47632053 32 + 50890351 TGACACATGTAGGTG-----------TGATTGATGGCATTTAG i chlSab2.chr6 I 7 C 0 s calJac3.chr22_GL285922_random 49146 43 + 138250 TGCCACGTGTGGGTGGGAAGGATGCACAGATGTTGGTGTTTAG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56901166 16 + 60714840 I e rheMac3.chr19 60679139 1315 + 64156825 I a score=6423.000000 s hg38.chr19_GL949747v2_alt 686691 4 + 729520 GAAG s panTro4.chr19 59953595 4 + 63644993 GAAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103377199 4 - 106955855 GAAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55821801 4 + 59248254 aaag i macFas5.chr19 I 306 C 0 s papAnu2.chr19 47928843 4 + 51301725 AAAG i papAnu2.chr19 C 0 I 295 s chlSab2.chr6 47632085 4 + 50890351 AAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 49189 4 + 138250 GAAG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56901166 16 + 60714840 I e rheMac3.chr19 60679139 1315 + 64156825 I a score=169104.000000 s hg38.chr19_GL949747v2_alt 686695 111 + 729520 AATATTATCACTTCTTTCCCGTAAGAGCAACTTAGAGCAAGAAAATGGTATTATTCTTAGGGCCTTCTCTCTTATGGAGGCTCCAAGCCAGGGTTGCCATGGCAGAAGATG s panTro4.chr19 59953599 107 + 63644993 AATATTATCACTTCTTTCCCGTAAGAGCAACTTAGAGCAAGAAAATGGTATT---CTTAGGGCCTTCTCTCTTATG-AGGCTCCAAGCCAGGGTTGCCATGGCAGAAGATG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103377203 107 - 106955855 AATATTATCACTTCTTTCCCATAAGAACAACTTAGAGCAAGAAAATGGTATT---CTTAGGGCCTTCTCTCCTATG-AGGCTCCAAGCCCGGGTTGCCATGGCAGAAGATG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55821805 107 + 59248254 aaTATTATCACTTGTTTCCTGTAAGAGCAACTTAGAGCAAGAAAATGGTATT---CTTAAGGCCTTCTCTCCTATG-AGGCTCCAAGCCAGGGCTGCCATCGCAGAAGATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47929142 107 + 51301725 aatattatcacTTGTTTCCCATAAGAGCaacttagagaaagaaaatggtatt---CTTAAGGCCTTCTCTCCTATG-AGGCTCCAAGCCAGGGTTGCCATCGCAGAAGATG i papAnu2.chr19 I 295 C 0 s chlSab2.chr6 47632089 107 + 50890351 AATATTATCACTTGTTTCCTGTAAGAGCAACTTAGAGCAAGAAAATGGTATT---CTTAAGGCCTTCTCTCCTATG-AGGCTCCAAGCCAGGTTTGCCATCGCAGAAGACG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 49193 102 + 138250 AGTGTCATTACTTCTCTCCCATAAGAGGAACTTAGAGCGAGAAAATGATATT---CTTAGGGC---CTCTCCCGTG-AGGCTCCAATC--GTGTTGCCGTGGCAGAGGCTG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56901166 16 + 60714840 I e rheMac3.chr19 60679139 1315 + 64156825 I a score=1585737.000000 s hg38.chr19_GL949747v2_alt 686806 775 + 729520 CTGGGCTTG-CTTTTTCCTTGAGAGAACTGTACTCAAGATGATGTAACTGTCACC--CC-GGGTGCCACTTGGGTGCTTTGGAGAAGCGCT-CAGACGCGACACGCCGTGACGACTCCGCGGCAGGCAGCCGGACCTGTCCTCTGGCGTGCGGTTCACGGGCTGTGTTTATCCCCCTGGTTCCTTCA----CAGCCACCTTGGGAAATACGTTGCCTCTGAATC-ACGCCAGGCAGGCTCTCACTG------TGTGTGCTGCGGGGCTGGAAATCAGGGTGACACTCCGCTACCG-AACAGCCTGACTAGGAAGCCAGAAAGACGCTGCCGGCTTT--AGTTTGTCCTTTGACTTTCCTTGATATGAATGAAGATAGAGCACTTCCACACTGCACAACAGGAAAAGCCCAGAACGCTTCCTGGAGATAGCGAGGGGGTGATGCAGCGGACAGCTATGGCTGATGACCCCC---TCACCTCTGACTCCC----------CCTCCCTCCCTGCTTTCTGAACGCACATCCATCACCAACCATAGGTT--CCTGTTTGGGGTTTGCTGGCTGGaaaaaaaaaaaaaaaaaaaaGGAAAGCTGGCTTTCTAGTAAAAACCACTTCCTTTGCTCATTTATCAAACTCAAACGCTAGGAGGGCCACCTAA---CATCCTCCGTCCCACGCAATGGGGTGTTTCTGGAGCACTCCGGT-TTATCAGGGACCCTGTCAGTTGCCATCGCACATGTATATGGGGCCAGCCCCTGTGCCACCGAAGA-GGGGGGATATTGAAAACATGTTACAGCCAGGAGCGG s panTro4.chr19 59953706 775 + 63644993 CTGGGCTTG-CTTTTTCCTTGAGAGAACTGTACTCAAGATGATGTAAATGTCGCC--CC-GGGTGCCACTTGGGTGCTTTGGAGAAGTGCT-CAGACGCGACACGCCGTGATGACTCCGCAGCAGCCAGCTGGACCTGTCCTCTGGCTTGCGGTTCATGGGCTGTGTTTATCCCCCTGGTTCCTTCA----CAGCCACCTTGGGAAATATGTTGCCTCTGAATC-ACGCCAGGCAGGGTCTCACTG------TGTGTGCTGCGGGGCTGGAAATCAGGGTGACACTCCGCTACCG-AACAGCCTGACTAGGAAGCCAGAAAGACGCTGCCGGCTTT--AGTTTGTCCTTTGACTTTCCTCGATATGAATGAAGATGGGGCACTTCCACACTGCACAACAGGAAAAGCCCAGAACACTTTCTGGAGATAGCGAGGGGGTGATGCAGCGGACAGCTATGGCTGATGACCCCC--CTCACCTCTGACTCCC----------CCTCCCTCCCTGCTTTCTGAACGCACATCCATCACCAACCATAGGTT--CCTGTTTGGGGTTTGCTGGCTGGGAAAAAAAAAAAAAAAAA--GGAAAGCTGGCTTTCTACTAAAAACCACTTCCTTTGCTCATTTATCAAACTCAAACCCTAGGAGGGCCACATAA---CATCCTCCGTCCCAGGCAATGGGGTGTTTCTGGAGCACTCCGGTGTTATCAGGGACCCTGTCAGTTGCCATCACACATGTATATGGGGCCAGCCCCTGTGCCACCGAAGA-GGGGGGATGTTGAAAACATGTTACAGCCAGGAGCGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56901182 788 + 60714840 CTGGACTCG-CTTTTTCCTTGAGAGACTTGTACTCGAGATGATGTAAATGTCTCCAGCC-GGGTGCCACTTGGGTGGTTTGGAGAAGTGCTACAGATGCAACATGCCGTGATGACTCCGCAGCAGCCAGCTGGACCTGTCCTCTGGCTTGCGGTTCACGGGCTGTGTTTATCCCCCCGGTTCCTTCA----CAGCCACCTTGGGAAATATGTTGCCTCTGAATC-ACGCCAGGCAGGGTTTCACTGTGCGACTGTGTGCTGCGGGGCTGGAAATCAGGGTGACACTGCGCTACAGCAGCAGCCTGACTAGAAAGGCAGAAGGACGCTGCCATCTTTAGAGTTTGTCCTTTGACTTTCCTCGATATGAATGAAGATGGGGCACTTCCACACCGCGCAACAGGAAAAGCCCAGAAAACTTTCTGGAGATAGTGAGGGGGTGATGCAGCGGACAGCTATGGCTGATGACCCCCCCCTCACCTCTGACTCCC----------CCTCCCTTCCCGCTTTCTGAACGCACATCCATCACCAACCATAGGTTTCCCTGTTTGGGGTTTGCTGGCTGGAAAAAAAAAAAAAAA-----GGAAAGCTGGTTTTCTACTAAAAACCACTTCTTTTGTCCATTTATCAAACTCAAACCCTAGGAGGGCTACATAA---CATCCTCCGTCCCAGGCAACGGGGTGTTTCTGGAGCACTCCGGT-GTATCGGGGACCCAGTCAGTTGCCATCGCATATGTATATGGGGCCATCCCCTATACCACCGAAGAGGGGGGGATGTTGAAAACATGTTACAGCCAGGAGCGG i ponAbe2.chr19 I 16 C 0 s nomLeu3.chr10 103377310 780 - 106955855 CTGTGCTCG-CTTTTTCCTTGAGAGAATTGTACTCAAGATGATGTAAATGTCGCC--CC-GGGTGCCACTTGGGTAGTTTGGAGAAGTGCT-CAGACACAACACGCTGTGATGACTCAGCAGCAGCCAGCTGGACCTGTCCTCTGGCTTGCGGTTCACGGGCTGTGTTTATCCCTCCGGTTCCTTCA----CAGCCACCTTGGGAAATATGTTGCCTCTGAATC-ACGCCAGGCAGGGTCTCACTGTGCGACTGTGTGCTGCGGGGCTGGAAATCAGGGTGACACTCCGCTACAGCAGCAGCCTGACTAGGAAGGCAGAAGGACGCTGCCATCTTTAGGGTTTGTCGTTTGACTTTCCTCAATATGAATGACGATGGGGGACTTCCACACTGTGCAACAGGAAAAGCCCAGAAAACTTTCTGGAGATAGCGAGGGGGTGATGCAGCAGACAGCTATGGCTGATGACCCCC--CTTACCTGTGGCTCCC----------CCTCCCTCCCTGCTTTCTGAACGCACATCCATCACCAACTATAGGTT--CCTGTTTGGGGTTTGCTGGCTGGGAAAAAAAAAGAAAA-----GGAAAGCTGGCTTTCTACTAAAAACCACTTCCTTTGCCCATTTATCAAACTCAAACCCTAGGAGGGCCACATAA---CATCCTCCGTCCCAGGAAACGGGGTGTTTCTGGAGCACTCCGGT-GTATCAGGGACCCGGTCAGTTGCCATCGCATATGTATATGGGGCCAGCCCCTGTGCCACCAAAGA-GCGGGGATGTTGAAAACGTGTTACAGTCAGGAGCAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55821912 787 + 59248254 CTGGGCTTGTTTTTTTCCTTGAGAGAATTGTACTCAAGGTGATGTACATGTCGCC--CT-GGGTGCCACTTGGGTGGTTTGGAGAAGTGCT-CGGACGCAACACGCCCTGATGAGTCAACAGCAGCCAGCTGGACCCGTCTTCTGGCTTGCGGTTCACGGGCTGTGTTTATCCCTCTGGTTCCTTCA----CAATCACCTTGGGAGATACGTTGCCTCTGGATC-ACGCCAGGCAGGTTCTCCCTGTGTGACTGTGTGCTGCAGGGCTGGAAATCAGGGTGGCACTCCGCTACAGCGGCAACCTGACTAGGAAGGCAGGAAGATGCTGCCATCTTTAGAGTTTGTCCTTTGACTTTACTCGATATGAATGAAGATGGGGCACTTCCACACTGCACAACAGGAGAAGTCCAGAAAACTTTCTGGAGATAGCGAGAGGGTGATGCAGCGGACAGCTATGACTGATGACTGCC--CTCACCTCTGACTCCC----------GCTTCCTCCCCGCCTTCTGAACGCACATCCATCACCAACCATAGGTT--CTTGTTTGGGGTTTGCTGGCTGGaaaaaaaaaaaaaaaaaaa-GGAAGCCTGGCTTTCTACTAAAAACCACTTCCTTTGCCCATATATCAAACTCAAACCCTCGGTGGGCCACATAACATCATCCTCCATCCCAGGCAACGAGGTGTTTCTGGAGCACTCCGGT-CTATCAGGGACCTGGTCAGTTGCCATCGCATACGTATGTGGGGCCAGCCCCTGTGCCACCGAAGA--GGGGGATGTTGGAAACTTGTTACAGCCGGGAGCGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47929249 782 + 51301725 CTGGACTCG-GTTTTTCCTTGAGGGAATTGTACTCAAGGTGATGTACATGTCACC--CT-GGGTGCCCCTTGGGTGGTTTGGAGAAGTGCT-CGGACTCAACACGCCCTGATGAGTCAACAGCAGCCAGCTGGACCCGTCTTCTGGCTCGCGGTTCACGGGCTGTGTTTATCCCTCTGGTACCTTCA----CAATCACCTTGGGAGATACGTTGCCTCTGGATC-ACGCCAGGCAGGTTCTCCCTGTGCGACTGTGTGCTGCAGGGCTGGAAATCAGGGTGGCACTCCGCTACAGCGGCAACCTGACTAGGAAGGCAGGAAGATGCTGCCATCTTTAGAGTTTGTCCTTTGACTTTACTCGATATGAATGAAGATGGGGCACTTCTACACTGCACAAC---AGAAGTCCAGAAAACTTTCTGGAGATAGTGAGAGGGTGATGCAGCGAACAGCTATGACTGATGACTGCC--CTCACCTCTGACTCCC----------GCTTCCTCCCCGCTTTCTGAACGCACATCCATCACCAACCATAGGTT--CTTGTTTGGGGTTTgctggctgg---aaaaaaaaaaaaaaaa-ggaagcctggCTTTCTACTAAAAACCacttcctttgcccatttatcaAACTCAAACCCTCGGAGGGCCACATAACATCATCCTCCATCCCAGGCAACGAAGTGTTTCTGGAGTACTCTGGT-CTATCAGGGACCTGGTCAGTTGCCATCGCGTATGTATGTGGGGCCAGCCCCTGTGCCACCGAAGAgggggggATGTTGGAAACTTGTTACAGCCGGGAGCGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47632196 778 + 50890351 CTGGGCTTGTTTTTTTCCTTGAGAGAATTGTACTCAAGGTGATGTACATGTCACC--CT-GGGTGCCACTTGGGTAGTTTGGAGAAGTGCT-CGGACGCAACACGCCCTGATGAGTCAACAGCAGCCAGCTGGACCCGTCTTCTGGCTTGCGGTTCACGGGCTGT--------CTCTGGTTCCTTCACAATCAATCACCTTGGGAGATACGTTGCCTCTGAATC-ACGCCAGGCAGGTTCTCCCTGTGCGAC--TGTGCTGCAGGGCTGGAAATGAGGGTGGCACTCCGCTACAGCAGCAACCTGACTAGGAAGGCAGGAAGATGCTGCCACCTTTAGAGTTTGTCCTTTGACTTTACTCAATATGAATGAAGATGGGGCAGTTCCACACTGCATAACAGGAAAAATCCAGAAAACTTTCTGGAGAT----AGAGGGTGATGCAGCGGACAGCTATGACTGATGACTGCC--CTCACCTCTGACTGCC----------CCTTCCTCCCCGCTTTCTGAACGCACATCCATCACCAACCATAGGTT--CCTGTTTGGGGTTTGCTGGCTGGaaaaaaaaaaaaaaaaaaa-GGAAGCCTGGCTTTCCACTAAAAACCACTTCCTTTGCCCATTTATCAAACTCAAACCCTTGGAGGGCCACATAACATCATCCTCCATCCCAGGCAACGAGGTGTTTCTGGAGCACTCCGGT-GTATCAGGGACCTGGTCAGTTGCCATCGCATACGTATGTGGGGCCAGCCCCTGTGCCACCGAAGA-GGGGGGAGGTTGGAAACTTGTTACAGCTGGGAGCGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 49295 758 + 138250 CCAGACTTG-TTTTTCCCTTGAGA----TGGTGTCAACATGGTGTCAATGTCGCC--CTGGGGTGCCACTTGGGTGGTTTGGGTATGTGCT-CAG------------------------CAGCCGCCAGCTGGACCCGTCTTGTGCCTTGCAGTTCATGGGCTGTGTTTATGCCCCTGGTTCCTTCA----CGGGCACCTTGGGAGCTTTGTTGCCTCTGAATCAACACCAGGCAGGGTCTCACCATGAGACTGTGTGCTGTGAAGCTGGAAATCAAGGCCACACTCTGCTACAGCAGCAACCTGAGTGGGAAGGCAGGAAGGCGCCGCCGTCTTTAGAGTTTCTCTTTTGACTTTACTCGACGTGAATGAAGACAGAGCACTTTCACACTGCACAGCAGGAG--GTCCAGAAAGCCTCCTGGAGATCGGGAGGGGGTGATGCAGCAGACAGCTGTGGCTCATGACGCCC---TCACCTCTGCCTCCCTCTCCCTCCTTCTCCCTCCCCCATTTCTGAACGCACATCCATCACCAACCATAGGTT--CCTGTTTGGAGTTTACTGGCAGGAAAGAAAAAAA---------GGAAAGCCGGCTTTCTACTAAAAACCACTTCCTTTGACCATTTCTCAAACTC-AACTCTAGGAGGGCCACACATCGCCATCCTCCGTCCCAGGGAACTGGGTGTTTTTGGGGTGCTCAGGT-GTATCAGGGACCCAGTCGGTTGCCACTGAATGTACATATGGGGCCAGCCGCAGTGACGCCAAAGG--GGGGGATATTGAAAACATCTTATAgctgggagcag i calJac3.chr22_GL285922_random C 0 I 1069 e canFam3.chr1 20093001 34018 - 122678785 I e rheMac3.chr19 60679139 1315 + 64156825 I a score=21195.000000 s hg38.chr19_GL949747v2_alt 687581 11 + 729520 Tgcccccttgg s panTro4.chr19 59954481 11 + 63644993 Tgcccccttgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56901970 11 + 60714840 Tgcccccttgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378090 11 - 106955855 cgcccccttgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55822699 11 + 59248254 Tgcccccttgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930031 10 + 51301725 TGCCccttgg- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47632974 11 + 50890351 Tgcccccttgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51122 11 + 138250 tgccctctggg i calJac3.chr22_GL285922_random I 1069 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e rheMac3.chr19 60679139 1315 + 64156825 I a score=50600.000000 s hg38.chr19_GL949747v2_alt 687592 18 + 729520 ttcaagcagttcttctgc s panTro4.chr19 59954492 18 + 63644993 ttcaagcagttcttctgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56901981 18 + 60714840 ttcaagcagttcttctgc i ponAbe2.chr19 C 0 I 354 s nomLeu3.chr10 103378101 18 - 106955855 ttcaagcagttcttctgc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680454 18 + 64156825 ttcaagcagttcttctgc i rheMac3.chr19 I 1315 C 0 s macFas5.chr19 55822710 18 + 59248254 ttcaagcagttcttctgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930041 18 + 51301725 ttcaagcagttcttctgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47632985 18 + 50890351 ttcaagcagctcttctgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51133 15 + 138250 ttcaagcaattttgc--- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I a score=124271.000000 s hg38.chr19_GL949747v2_alt 687610 44 + 729520 ctcagcctccctaatagctgggattaca-ggcgtgcaccatcacg s panTro4.chr19 59954510 44 + 63644993 ctcagcctccctagtagctgggattaca-ggcgtgcaccatcatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902353 45 + 60714840 ctcagcctctctagtagctgggattacagggcgtgcaccatcacg i ponAbe2.chr19 I 354 C 0 s nomLeu3.chr10 103378119 44 - 106955855 ctcagcctccctagtagctgggattgca-ggcgtgcaccatcacg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680472 44 + 64156825 ctcagcctccctagtagctgggattaca-ggagtgcaccatcacg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55822728 44 + 59248254 ctcagcctccctagtagctgggattaca-ggagtgcaccatcacg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930059 44 + 51301725 ctcagccttcctagtagctgggattaca-ggagtgcaccatcaCG i papAnu2.chr19 C 0 M 503 s chlSab2.chr6 47633003 44 + 50890351 ctcagcctccctagtagctgggattaca-ggagtgcaccatcacg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51148 41 + 138250 ctcagctcacctagtagctggcattaca-ggcatgcaccacg--- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I a score=108854.000000 s hg38.chr19_GL949747v2_alt 687654 51 + 729520 cctgg-ccactgttatgtagtttttaCCACAATTTAAAAAA-GGAA--AGAGTGC s panTro4.chr19 59954554 51 + 63644993 cctgg-ccactgttatgtacttttTACCACAATTTAAAAAA-GGAA--AGAGTGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902398 53 + 60714840 cctggcccagtgttacatactttttaCCACAATTTAAAAAAGGGAA--AGAGTGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378163 51 - 106955855 cctgg-ccagtgttacgtacttttTACCACAATTCAAAAAA-GGAA--AGAGTGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680516 51 + 64156825 cctgg-ccagtgttgtgtacttttTATCACAATTTTAAAAA-GGAA--AGAGTGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55822772 51 + 59248254 cctgg-ccagtgttgtgtacttttTATCACAATTTAAAAAA-GGAA--AGAGTGC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47633047 51 + 50890351 cctgg-ccagtgttgtgtacttttTATCACAATTTTAAAAA-GGAA--AGAGTGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51189 53 + 138250 cctgg-ccagtgctctatacttttTATCACAATTTAAAAAA-GGAAAGAGAGTGC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e papAnu2.chr19 47930103 503 + 51301725 M a score=162511.000000 s hg38.chr19_GL949747v2_alt 687705 70 + 729520 CTGGGTGAGTCCTACGCAC-CTATTCGGAGAACCAAAGGCTTTGAGG---TTATCCTCGGCCCAC----CCATCTGAT s panTro4.chr19 59954605 69 + 63644993 CTGGGTGAGTCCTAC-CAC-CTATTCAGAGAACCAAAGGCTTTGAGG---TTATCCTCGGCCCAC----CCATCTGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902451 70 + 60714840 CTGCGTGAGTCCTACACAC-CTATTCAGAGATCCAAAGGCTTTGACG---TTATCCTCGGCCCAC----CCATCTGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378214 70 - 106955855 CTGGGTGAGTCCTATGCAC-CTATTCAGAGAACCAAAGGCTTTGAGG---TTATCCTCAGCCCAC----CCATCTGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680567 73 + 64156825 CTGGGTAAATCCTATGCAC-CTATTCAGAGAACCAGAGGCTTTGAGGCTTGTATCCTCAGCCCAC----CCATCTCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55822823 73 + 59248254 CTGGGTGAGTCCTACGCAC-CTATTCAGAGAACCAGAGGCTTTGAGGCTTTTATCCTCAGCCCAC----CCATCTCAT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47633098 70 + 50890351 CTGGGTGAGTCCTACGCAC-CTATTCAGAGAACCAGAGGCTCTGAGG---TTATCCTCAGCCCAC----CCATCTCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51242 71 + 138250 TTGGGTGAGCCCTACGCACATTATTTAGAGAACCAGAGGTTTTGAGA---TTATCCTCAGGGCCC----CCATCTGAT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20127019 71 - 122678785 CCAGATGAATCCTAT--AC-ATATTTAGAGAACCAGAGGTTTCGAGG---TTACTCTCAGACTACTGTACTATCAGT- i canFam3.chr1 I 34018 C 0 e papAnu2.chr19 47930103 503 + 51301725 M a score=166234.000000 s hg38.chr19_GL949747v2_alt 687775 73 + 729520 GGGAGTGTTTCTCAAACTTGCTTTTCCGTGATCTCCCAGTAAGAAATACC-TACT------ACACACACACAGTCTCCgg s panTro4.chr19 59954674 71 + 63644993 GGGAGTGTTTCTCAAACTTGCTTTTCCGTGATCTCCCAGTAAGAAATACC-TACT------ACACACACA--GTCTCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902521 73 + 60714840 GGGAGTGTTCCTCAAACTTGCTTTTCCATGAACTCCCAGTAAGAAATACC-TACT------ACACACACACTGTCTCCGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378284 73 - 106955855 GGGAGTGTTTCTCAAACTTGCTTTTCCATGAACTCCCAGTAAGAAATAGC-TACT------ACACACACACTGTCTCCGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680640 67 + 64156825 GGGAGTGTTTTTCAAACTTGCTTTT-------CTCCCAGTGAGAAATAATGTCCT------ACACACACACACACTCCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55822896 65 + 59248254 GGGAGTGTTTTTCAAACTTGCTTTT-------CTCCCAGTGAGAAATAACGTCCT--------ACACACACACACTCCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930620 67 + 51301725 GGGAGTGTTTTTCAAACTTGCTTTT-------CTCCCAGTGAGAAATAAcgtcct------acacacacacacactcctg i papAnu2.chr19 M 503 C 0 s chlSab2.chr6 47633168 63 + 50890351 GGGAGTGTTTTTCAAACTTGCTTTT-------CTCCCAGTGAGAAATAACGTCCT----------ACACACTCTCTCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51313 79 + 138250 GGGAGTGTTTCTCTAACTTGCTTTTCCATGATCTCCCAGTAAGAAATCCA-TACTACACACACACACACACACTCTCCTG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20127090 64 - 122678785 AGAAGTATTTCTCAAACTAGTTTTTCCCTGATCCCACAGTAAGAA----------------ATGCACACATtgtataagg i canFam3.chr1 C 0 I 82 a score=364969.000000 s hg38.chr19_GL949747v2_alt 687848 147 + 729520 tcggcatgcttagggtagtcttccaattcccc-ctcctggtatttacaccctggagtggtccgctcctcttgggctgaacctgtaacttgctcccaagcaagagcacacagcaagct----cacgcacgtggttgttggtgtgattctgttt s panTro4.chr19 59954745 147 + 63644993 TCGGCATGCTTAGGGTAGTCTTCCAattcccc-ctcctggtattcacaccctggagtggtccactcctcttgggctgaacctgtaacttgctcccaagcaagagcacacagcaagct----cacgcacgtggttgttggtgtgattctgttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902594 147 + 60714840 TCGGTGTGtttagggtagtcttccgattcccc-ctcctggtattcacaccctggactggtccactcctcttgggctgaacctgtaacttgctcccaagcaagagcacatagcaaact----cacgcacatggttgtcggtgtgattgtttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378357 146 - 106955855 TCGGCGTGCTtagggtggccttccgattcccc-ctcccggtattcccaccctggagtggtccactcctcttgggctgaacctgtaacttactcccaagcaagagcacatagcaagct----cacgcacgtggttg-cggtgtgattctgttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680707 139 + 64156825 TCGGCGTG-----------CTTCCgattcccc-ctcctggta-tcacaccctggaggggtccactccttttgggctgagtctgtaacttgcccccaagcaagagcatacagcaagctcacgcacgcacgtggttgttggtgtgattcagttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55822961 135 + 59248254 TCGGCGTG-----------CTTCCGATTCCCC-CTCCTGGTA-TCACACCCTGGAGGGGTCCACTCCTCTTGGGCTGAGTCTGTAACTTGCCCCCAAGCAAGAGCATACAGcaagct----cacgcacgtggttgttggtgtgattcagttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930687 139 + 51301725 tcGGCGTG-----------CTTCCGATTCCCC-CTCCTGGTA-TCACGCCCTGGAGGGGTCCACTCCTCTTGGGCTGAGTCTGTAACTTGCCCCCAAGCAAGAGCATACAGCAAGCTCACGCACACACGTGGTTGTTGGTGTGATTCAGTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47633231 135 + 50890351 TCGGTGTG-----------CTTCTGATTCCCC-CTCCTGGTA-TCACACCCTGGAGGGGTCCACTCCTCTTGGGCTGAGTCTGTAACTTGCCCCCAAGCAAGAGCATACAGcaagct----cacgcacgtggttgttggtgtgattcagttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51392 146 + 138250 CTGG-GGGCctagggtagtctcctgactccccgctcctggtattcactccctggaa-ggtcccctcctcttcggctgagcctataacttgctccctagcaagagcatacagcaagct----cacacgcatagttgttggtgggattctgttt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20127154 82 - 122678785 I a score=11632.000000 s hg38.chr19_GL949747v2_alt 687995 13 + 729520 ctccagattgtct s panTro4.chr19 59954892 13 + 63644993 ctccagattgtct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902741 13 + 60714840 ccctggcttctcc i ponAbe2.chr19 C 0 I 62 s nomLeu3.chr10 103378503 13 - 106955855 ctcccagctgtct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680846 6 + 64156825 ctcccg------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55823096 6 + 59248254 ctcccg------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930826 13 + 51301725 CTCCCGGTTGTTG i papAnu2.chr19 C 0 I 6 s chlSab2.chr6 47633366 13 + 50890351 ctctcggttgttg i chlSab2.chr6 C 0 I 6 s calJac3.chr22_GL285922_random 51538 13 + 138250 ctcccagttgtta i calJac3.chr22_GL285922_random C 0 I 9 s canFam3.chr1 20127236 13 - 122678785 CTCCTGGCTGCCC i canFam3.chr1 I 82 C 0 a score=66460.000000 s hg38.chr19_GL949747v2_alt 688008 27 + 729520 ccattcctccctggcttctccacaggg s panTro4.chr19 59954905 27 + 63644993 ccattcctccctggcttctccacaggg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103378516 27 - 106955855 ccattcctccctggcttctctacaggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680852 25 + 64156825 --gttcctccctggcttctccacaggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55823102 25 + 59248254 --gttcctccctggcttctccacaggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930845 27 + 51301725 CCGTTCCTCCCTGGCTTCTCCACAGGG i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 47633385 27 + 50890351 ccgttcctccctggcttctccacaggg i chlSab2.chr6 I 6 C 0 s calJac3.chr22_GL285922_random 51560 27 + 138250 cagttcctccctggctactccacaggg i calJac3.chr22_GL285922_random I 9 C 0 s canFam3.chr1 20127249 23 - 122678785 ---CAGCTCTCGGGCC-CCCCAGAGGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56902754 62 + 60714840 I a score=231827.000000 s hg38.chr19_GL949747v2_alt 688035 98 + 729520 ccgctcaccatggcagccggctccatcaccaccagccagcgagagggcaagacaagagggctgac--gagggacgctaccatcacagaggtc----agttttgt s panTro4.chr19 59954932 100 + 63644993 cggctcaccatggcagccggctccatcaccgccagccagcgagagggcaagacgagagggctgacaagagggacgctaccatcacagaggtc----agttttgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902816 100 + 60714840 ccgctcgccatggcagccggctccatcaccgccggccagcgagagggcaagacaagagggctgacaagagggacgctaccatcacagaggtc----agttttgt i ponAbe2.chr19 I 62 C 0 s nomLeu3.chr10 103378543 100 - 106955855 ccgctcaccatggcagccgactccatcaccgccagccagtgagagggcaagacaagagggctgacaagagggacgctaccatcacagaggtc----agtttcgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680877 99 + 64156825 ccactcaccatgacagctggctccaccacagccagccagcgagagggcaagac-agagggctggcaggagggatgctaccatcacagaggtc----ggttttgt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55823127 98 + 59248254 ccgctcaccatgacagctggctccaccacagccagccagcgagagggcaagac-agagggctggcaggagggatgctaccatc-cagaggtc----ggttttgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930872 83 + 51301725 CCACTCACCATGACAGCTGGCTCCACCACA----------------GCAAGAC-AGAGGGCTGGCAGGAGGGATGCTACCACCACAGAGGTG----GGTTTTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47633412 99 + 50890351 ccgctcaccatgacagctggctccaccacagccagccagcgagagggcaagac-agacggctggcaggagggatgctcccatcacagaggtc----ggttttgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51587 101 + 138250 ccgcccaccatggcagctagctctatcacagccagccatccagcaggcaagac-agagggcTGGCAG--GGAGTTATAGCATCACAGAGCTCAGGTGGttttgt i calJac3.chr22_GL285922_random C 0 I 362 s canFam3.chr1 20127272 59 - 122678785 ----------TGGCTCACAGCACTATTGCAAC-----------AAGGCAGTAC-------------------ATGCTAGCAGTACAGATGCCCGGCAgt----- i canFam3.chr1 C 0 C 0 a score=127738.000000 s hg38.chr19_GL949747v2_alt 688133 57 + 729520 aacctaaccacaagacta-acctactgtcacttctgccctatcctact-gctagaagcc s panTro4.chr19 59955032 57 + 63644993 aacctaaccacaagacta-acctaccgtcacctctgccctatcctact-gctagaagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902916 57 + 60714840 aacctaaccacaagacta-acctaccgtcacctctgccctatcctact-gctagaagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378643 49 - 106955855 a--------acaagacta-acctaccgtcacctctgccctaccctact-gctagaagcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680976 53 + 64156825 aacctaaccacaagacta-acc----gtcacctctgccctatcctact-gctagaaacc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55823225 57 + 59248254 agcctaaccgcaagacta-accaactgtcacctctgccccatcctact-gctagaaacc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930955 57 + 51301725 AGCCTAACCACAAGACTA-ACCAACTATCACCTCTGCCCTATCCTACT-GCTAGAAACC i papAnu2.chr19 C 0 I 310 s chlSab2.chr6 47633511 57 + 50890351 aacctaaccacaagacta-accagctgtcacctctgccctatcctacg-gctagaaact i chlSab2.chr6 C 0 I 294 s canFam3.chr1 20127331 59 - 122678785 aacctaatcccagaatcagacattccgtcagcttcactctgttcttttcactggaagtg i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 51688 362 + 138250 I a score=10312.000000 s hg38.chr19_GL949747v2_alt 688190 4 + 729520 agtc s panTro4.chr19 59955089 4 + 63644993 agtc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902973 4 + 60714840 agtc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378692 4 - 106955855 cgtc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60681029 4 + 64156825 agtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55823282 4 + 59248254 agtc i macFas5.chr19 C 0 I 305 s papAnu2.chr19 47931322 4 + 51301725 agtc i papAnu2.chr19 I 310 C 0 s chlSab2.chr6 47633862 4 + 50890351 agtc i chlSab2.chr6 I 294 C 0 s canFam3.chr1 20127390 4 - 122678785 agtg i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 51688 362 + 138250 I a score=13528.000000 s hg38.chr19_GL949747v2_alt 688194 5 + 729520 gctac s panTro4.chr19 59955093 5 + 63644993 gctac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902977 5 + 60714840 gctac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378696 5 - 106955855 gctac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60681033 5 + 64156825 gctaC i rheMac3.chr19 C 0 I 539 s macFas5.chr19 55823591 5 + 59248254 gctac i macFas5.chr19 I 305 C 0 s papAnu2.chr19 47931326 5 + 51301725 gcTAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47633866 5 + 50890351 gctac i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20127394 5 - 122678785 gttgg i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 51688 362 + 138250 I a score=233294.000000 s hg38.chr19_GL949747v2_alt 688199 118 + 729520 atctcccccacactc--------------------aaagggaggtggtcgcacCGTGGGGTCCA--CTGGAAGTTGCCTACCAGACTCAGGTCATCCCAAACACACCCTCTAGCCATT------TGGTGTGGCATCGGAAAGAAAA s panTro4.chr19 59955098 118 + 63644993 atctcccccacactc--------------------aaagggaggtggtcgcacTGTGGGGTCCA--CTGGAAGTTGCCTACCAGACTCAGGTCATCCCAAACACACCCTCTAGCCATT------TGGTGTGGCATCGGAAAGAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902982 118 + 60714840 atctcccccacactc--------------------aaagggaggtggtctcacTGTGGGGTCCA--CTGGAAGTTGCCTACCAGAGTCAGGTCATCCCAAACACACCCTCCAGCCATT------TAGTATGGCATTGGAAAGAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378701 118 - 106955855 atctcccccacactc--------------------aaagggaggtggtctcacTGTGGGGTCCA--CTGGAAGTTGCCTACCAGAGTCAGGTCATCCCAAACACACCCTCCAGCCATT------TGGTATGGCATCGGAAAGAAAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55823596 117 + 59248254 atct-ccccacagtc--------------------aaagggaggtggtctcacTGTGGGGTCCA--GTGGAAGTTGCCTACCAGAGTCAGGTCATCCCAAATACACCCTCCAGCCGTT------GGGTATGGCATCAGAAAGAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47931331 117 + 51301725 ATCT-CCCCACAGTC--------------------AAAGGGAGGTGGTCTCACTGTGGGGTCCA--CTGGAAGTTGCCTACCAGAGTCAGGTCATCCCAAATACACCCTCCAGCCGTT------GGGTATGgcatcaaaaagaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47633871 117 + 50890351 atct-ccccacagtc--------------------aaagggaggtggtctcacTGTGGGGTCCA--CTAGAAGTTGCCTACCAGAGTCAGGTCATCCCAAATACACCCTCCAGCTGTT------GGGTATGGCATCAGAAAGAAAA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20127399 144 - 122678785 gtcctgcccacagttggaggtcagaaggcatggagagggggaggtgggatcgt--tgggctccaggctggaaggtgcccaccCGAGTCTGTTCATCCCAAACATATCCTTTGGCTGTTGTGGTCTGATGTGGTAGCAAAAAGAAAA i canFam3.chr1 C 0 I 307 e calJac3.chr22_GL285922_random 51688 362 + 138250 I e rheMac3.chr19 60681038 539 + 64156825 I a score=260824.000000 s hg38.chr19_GL949747v2_alt 688317 151 + 729520 CTAAggccaggtacggtggctcatgcctgtaatcccaacaatttgggaggccatggcggaagggtcacttgagcccaggagtttgagaccagcctgggcaacatagcaaatgttatgttgccacctctacaaataattagccaagtgtggt s panTro4.chr19 59955216 144 + 63644993 CTAAggccaggtacggtggctcatgcctgtaatcccaacaatttgggaggccatggcggaagggtcacttgagcccagaagtttgagaccagcctgggcaacatagcaa-------gaccccacctctacaaataattagccaagtgtggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903100 144 + 60714840 CTAAggccaggtatggtggctcatgcctgtaatcccaacaatttgggaggccatggcagaagggtcacttgagcccaggagtttgagaccagcctgggcaacatagcaa-------gaccccacctctacaaataattagccaagtgtggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378819 144 - 106955855 CTAAggccaggtatggtggctcacgcctgtaatcctaacaatttgggaggccatggtggaagggtcacttgggcccaggagtttgagaccagcctgggcaacacagcaa-------gaccccacctctacaaataattagccaagtgtggt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55823713 144 + 59248254 CGACggccaggtacagtggctcatacctgtaatcccaacaatttgggaggccgtggcagaaggatcacttgagcccaggagtttgagaccagcctgggcaacatagcaa-------gaccccacctctacgaataattagccaagtgtggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47931448 144 + 51301725 ctacggccaggtacagtggctcatacctgtaatcccaacaatttgggaggccatggcagaaggatcacttgagcccaggagtttgagaccagcctgggcaacatagcaa-------gaccccacctctacaaataattagccaagtgtggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47633988 143 + 50890351 CTACggccaggtacagtggctcatacctgtaatcccaacactttgggaggccat-gcagaaggatcacttgagcccaggagtttgagaccagcctgggcaacatagcaa-------gaccccacctctacaaataattagccaagtgtggt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I e calJac3.chr22_GL285922_random 51688 362 + 138250 I e rheMac3.chr19 60681038 539 + 64156825 I a score=914406.000000 s hg38.chr19_GL949747v2_alt 688468 390 + 729520 ggcatgcacctgtagtcccagatactcaggaggctgaggcaggagaatcac---aggtcgaggttgtagtgagctgtgacggcactgcactccagccttggcaacacagtaagacctcgtctctaaaaaagcaaaaaGggctgggtgcactggctcacacctataatcccagcactttgggaggccaagacgggtggatcacctgaggtcaggagttcaagataag-cctggccaacatggtgatacc--gtctttaattagccaggtgtggtggtgggcgcctgtaatcccagctactcgggaggctgaggcatgagaatcgcttgaacatgggagac-acaggttgcagtgagctgagatcatgccattgcactccagcctgggcaacagagcga s panTro4.chr19 59955360 391 + 63644993 ggcgtgcacctgtagtcccagatactcaggaggctgaggcaggagcatcac---aggtcgaggttgtagtgagctgtgacggcactgcactacagccctggcaacacagtaagaccttgtctctaaaaa-gcaaaaaGggctgggtgcactggctcacacctataatcccagcactttgggaggccaagacgggtggatcacctgaggtcaggagttcaagatcag-cctggccaacatggtgataccctgtctttaattagccaggtgtggtggtgggcgcctgtaatcccagctactcgggaggctgaggcatgagaatcgcttgaacatgggagac-acaggttgcagtgagctgagatcatgccattgcactccagcctgggcaacagagcga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903244 393 + 60714840 ggcatgcacctgtagtcccagatactcaggaggctgaggcaggagaatcacaggaggtcgaggttgtagtgagctgtgatggcactgcactccagccttggcaacacagtgagaccttgtcgctaaaaa-gcaaaaaGggccaggtgcactggctcacacctataatcccagcactttgggaggccaagacgggtggatcacctgaggtcaggagttcaagaccag-cctggccaatatggtgataccc-gtctttaattagccaggtgtggtggtgggcgcctgtaatcccagctactcgggaggctgaggcatgagaatcgcttgaacctgggagac-agaggttgcagtgagccgagatcatgccattgcactccagcctgggcaacagagcga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378963 395 - 106955855 ggcatgcacctgtagtcccagatactcaggaggctgaggcaggagaatcacaggaggttgaggttgtagtgagctgtgatggcactgcactccagccttggcaacacagtgagaccttgtctctaaaaa-gcaaaaaGggccaggtgcactggctcacacctgtcatcccagcactttgggaggccaagacgggtagatcacctgaggtcaggagttcaagaccag-cctggccaacatggtgataccctgtctttaattagccaggtgtggtggtgggcacctgtaatcccagctactcaggaggctgaggcatgagaatcgcttgaacctgggagacaagaggttgcagtgagccaagatcatgccattgcactccatcctggacaacagagcga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60681577 393 + 64156825 ggcgtgcacctgtagtcccagctactcaggaggctgaggcaggagaatcacaggaggtcgaggctgtagtgagctgtgatggcactgcactccagccttagca--agagtgagaccttgtctctaaaaa-gcaaaaaGggctgggtgcactggctcacacctgtaattcctgtactttgggaggccaagacgggtggatcacctgaggtcaggagttcaagaccaggcctggccaacatggtgatgcccagtcttcaattagccaggtgtggtggaagacgcctgtaatcccagctactcgagaggcggaggcatgagaatcgcttaaacccgggaggc-agaggttgcagcgagccgagatcatgccattgcactccagcctgggcaacagggtga i rheMac3.chr19 I 539 C 0 s macFas5.chr19 55823857 393 + 59248254 ggcgtgcacctgtagtcccagctactcaggaggctgaggcaggagaatcacaggaggtcgaggctgtagtgagctgtgatggcactgcactccagccttagca--agagtgagaccttgtctctaaaaa-gcaaaaaGggctggctgcactggctcacacctgtaattcctgtactttgggaggccaagatgggtggatcacctgaggtcaggagttcaagaccaggcctggccaacatggtgatgccccgtcttcaattagccaggtgtggtggaagacgcctgtaatcccagctactcgagaggctgaggcatgagaatcgcttgaacccgggaggc-agaggttgcagtgagccgagatcatgccattgcactccagcctgggcaacagggtga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47931592 393 + 51301725 ggcgtgcacctgtagtcccagctactcaggaggctgaggcaggagaatcacaggaggtcgaggctgtagtgagctgtgatggcactgcactccagccttagca--agagtgagaccttgtctctaaaaa-gcaaaaagggctgggtgcactggctcacacctgtaattcctgcactttgggaggccaagacgggtggatcacctgaggtcaggagttcaagaccaggcctggccaacatggtgatgcCCCGTCttcaattagccaggtgtggtggaagacgcctgtaatcccagctactcgagaggctgaggcatgagaatcgcttgaacccgggaggc-agaggttgcagtgagccgagatcatgccattgcactccagcctgggcaacagagcga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47634131 382 + 50890351 ggtgtgcacctgtagtcccagctactcaggaggctgagacaggagaatcacaggaggtcgaggctgtagtgagctgtgatggcactgcactccagccttagca--agagtgagaccttgtctctaaaaa-gcaaaaaGggctgggtgcactggct--cacctgtaattcctgcactttgggaggccaagacgggtggatcacctgaggtcaggagttcaagaccagacctggccaacatggtgatgccccgtctttaattagccaggtgtggtggtgcacgcctgtcattccagctattcgagaggctgaggcatgag---------aacccaggaggc-agaggttgcagtgagccgagatcatgccattgcactccagcctgggcaacagagcga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I e calJac3.chr22_GL285922_random 51688 362 + 138250 I a score=684584.000000 s hg38.chr19_GL949747v2_alt 688858 254 + 729520 gactAggtggctgttctgtgtactgtgggatattgagtagcatccctggcctccccagtaTCTCAAATATGAA------aacatgttttctatctcgattactgagcttttcggtgcctccttcggttctgcacctaagctaagagccccttcatctcaccctgatctcTATCCAGTTTCTAACACAGCAGTCTTGTAAGATGCCCGGACTTAAA-CGGTTATTTCCTGTGAAACAGGTGAAAGGGGCTTTCATCTCTAAA s panTro4.chr19 59955751 253 + 63644993 gactAggtggctgttctgtgtactgtgggatattgagtagcatccctggcctccccagtaTCTCAAATATGAA------aacatgttttctatctcgattactgagcttttcggtgcctccttcggttctgcacctaagctaagagccccttcatctcaccctGATGTCTATCCAGTTTCTAACA--GCAGTCTTGTAAGATGCCCGGACTTAAAACGGTTACTGCCTGTGAAACAGGTGAAAGGGGCTTTCATCTCTAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903637 245 + 60714840 gactgggtggctgttctgtgtgctgtaggatattgagcagcatccctggcctccccaGCATCTCAAATATGAA------aacatgttttctatcttgattactgagcttttcggtgcctcctttggttctgcacctaagctaagagccgcttcatctcagcctgatcTTTATCCAGTTTCTAACACAGCAGTCTTGTAAGATGCCCGGACTTAAA-CGGTTATTGCCT---------GTGAAAGGGGCTTTCATCTCTAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103379358 247 - 106955855 gactgggtggctgttctgtgtactgcaggatactgagcagtatccctggcctgcccactaTCTCAAATATGAA------aacatgttttctatcttgattactgagcttttcggtgcctccttcggttctgcacctaagctaagagccccttcatctcaccctgatctcTATCCAGTTTCTAACACAGCAGTCTTGTAAGATGCCCGGACTTAAA-CGGTTATTGCCTGTGAA-------AAAGGGGCTTTCATCTCTAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60681970 253 + 64156825 gactgggtggctattctgcgtactgtaggatattgagcagcatccctggcctccccagtaTCTCAAATATGAA------aacatgttttatatctcgattactgagcttttccgtgtctccttcggttctgcacctaagctgagagccccttcctctcaccctgatctctacccAGTTTCTAACA-AGCCGTCTTGTAAGATGCCCGGACTGAAA-CGGTTATGGCCTGTGAAAGGGGTGAAGGGGGCTTTCATCTCTAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55824250 253 + 59248254 gactgggtggctgttctgcgtactgtaggatattgagcagcatccctggcctccccagtaTCTCAAATATGAA------aacatgttttatatctcgattactgagcttttccgtgtctccttcggttctgcacctaagctgagagccccttcctctcaccctgatctctacccAGTTTCTAACA-AGCCGTCTTGTAAGATGCCCGGACTGAAA-CGGTTATGGCCTGTGAAAGGGGTGAAGGGGGCTTTCATCTCTAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47931985 253 + 51301725 gactgggTGGCTGTTTTGCATACTGTAGGAtattgagcagcatccctggcctccccAGTATCTCaaatatgaa------aacatgttttatatCTCGATTACTGAGCTTTTCAGTGTCTCCTTCGGTTCTGCACCTAAGCTGAGAGCCCCTTCCTCTCACCCTGATCTCTACCCAGTTTCTAACA-AGCCGTCTTGTAAGATGCCCAGACTGAAA-CAGTTATGGCCTGTGAAAGGGGTGAAGGGAGCTTTCATCTCTAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47634513 252 + 50890351 gattgggtggctgttctgtgtactgtaggatatccagcag-atccctggcctccccagtaTCTCAAATATGAA------aacatgttttatatctcgattactgagcttttccgtgtctccttaggttctgcacctaagctgagagccccttcctctcaccctgatctctacccAGTTTCTAACA-AGCCGTCTTGCAAGATGCCCGGACTTAAA-TGGTTATGGCCTGTGAAAGGGGTGAAGGGGGTTTTCATCTCTAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 52050 259 + 138250 GGCTGAGCGGTAGTTCTGTGTATTGTAGGCTACTGAGCAGCTTCCTTGGCCTCCCCAATATCCCAAAGAAAAATACTGGAAAACTCTTTGTATCCCAATGACTGAGCTTTTTAGTGCCTTCTTCAGTTCTGCACCTAAGCCCAGCGCCCCTTCAGCTCACCC-GACCTCCACCCAGTTTCTAACACATCAGTCTTGTAAGAGCCCCAGACTTAAG-TGACTATCGCCTGTGAAAGGGGTAAGAGGAGTTTTCATCTCTAAA i calJac3.chr22_GL285922_random I 362 C 0 e canFam3.chr1 20127543 307 - 122678785 I a score=1911.000000 s hg38.chr19_GL949747v2_alt 689112 1 + 729520 A s panTro4.chr19 59956004 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903882 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60682223 1 + 64156825 A i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55824503 1 + 59248254 A i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47932238 1 + 51301725 A i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47634765 1 + 50890351 A i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I e calJac3.chr22_GL285922_random 52309 0 + 138250 C e nomLeu3.chr10 103379605 0 - 106955855 C a score=-1107.000000 s hg38.chr19_GL949747v2_alt 689113 1 + 729520 -A s panTro4.chr19 59956005 1 + 63644993 -A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903883 1 + 60714840 -A i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47634766 1 + 50890351 T- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I e calJac3.chr22_GL285922_random 52309 0 + 138250 C e nomLeu3.chr10 103379605 0 - 106955855 C e papAnu2.chr19 47932239 1 + 51301725 I e macFas5.chr19 55824504 1 + 59248254 I e rheMac3.chr19 60682224 1 + 64156825 I a score=2739.000000 s hg38.chr19_GL949747v2_alt 689114 12 + 729520 GTCGGAACtttt s panTro4.chr19 59956006 12 + 63644993 GTCGGAACtctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903884 12 + 60714840 GTCTGAACTTTT i ponAbe2.chr19 C 0 I 13 e canFam3.chr1 20127543 307 - 122678785 I e calJac3.chr22_GL285922_random 52309 0 + 138250 C e nomLeu3.chr10 103379605 0 - 106955855 C e chlSab2.chr6 47634767 0 + 50890351 C e papAnu2.chr19 47932239 1 + 51301725 I e macFas5.chr19 55824504 1 + 59248254 I e rheMac3.chr19 60682224 1 + 64156825 I a score=22275.000000 s hg38.chr19_GL949747v2_alt 689126 249 + 729520 ttttttttttgagacggaatcttgctctgtcacccaggctggagggcagtggcatgatctcggctcactgcaatctccgcctcccagcttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccaccatgcccagctaattttttgtatttttttagtagaaacagggtttcattgtgttagccaggatggtctcgatctcctgacctcgtgatccaccgcgcccggcc s panTro4.chr19 59956018 249 + 63644993 ttttttgtttgagacggaatctcgctctgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccatgcctagctaattttttgtatttttttagtagaaacggggtttcattgtgttagccaggatggtctcgatctcctgacctcgtgatccaccgcgcccggcc i panTro4.chr19 C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I e ponAbe2.chr19 56903896 13 + 60714840 I e calJac3.chr22_GL285922_random 52309 0 + 138250 C e nomLeu3.chr10 103379605 0 - 106955855 C e chlSab2.chr6 47634767 0 + 50890351 C e papAnu2.chr19 47932239 1 + 51301725 I e macFas5.chr19 55824504 1 + 59248254 I e rheMac3.chr19 60682224 1 + 64156825 I a score=1820.000000 s hg38.chr19_GL949747v2_alt 689375 2 + 729520 AA s panTro4.chr19 59956267 2 + 63644993 AA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903909 2 + 60714840 AA i ponAbe2.chr19 I 13 C 0 s nomLeu3.chr10 103379605 2 - 106955855 AA i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 52309 2 + 138250 AA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I e chlSab2.chr6 47634767 0 + 50890351 C e papAnu2.chr19 47932239 1 + 51301725 I e macFas5.chr19 55824504 1 + 59248254 I e rheMac3.chr19 60682224 1 + 64156825 I a score=705182.000000 s hg38.chr19_GL949747v2_alt 689377 282 + 729520 GTCTGAACTTTTGCATGGCCTGTTGCCCTGGTGATAAACTGATGCCTTGT-TTCCTAAAAGGAATAAAGCCATGAGTTGCCTTTGTTCAGCTCATGGGCATTCACCCATGCACAGAGG-AAAAATAAAATCTACGACTCGGGTACATTTTCTTCTTTTTTTTTTCTTTTAAATGAGCAAGTTTGAGAGTCTGCAGTTTGGACTACCATGAGAATTGATAGGAAGGTGGGAGTCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG s panTro4.chr19 59956269 281 + 63644993 GTCTGAACTTTTGCATGGCCTGTTGCCCTGGTGATAAACTGATGCCTTGT-TTCCTAAAAGGAATAAAGCCATGAGTTGCCTTTGTTCAGCTCATGGGCATTCACCCATGCACAGAGG-AAAAATAAAATCTACGACTCGGGTACATTTTCTTCTTTTTTTTT-CTTTTAAATGAGCAAGTTTGAGAGTCTGCAGTTTGGACTACCATGAGAATTGATAGGAAGGTGGGAGTCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903911 268 + 60714840 GTCTGAACTTTTGCGTGGCCTGTTGCCCTGGTGATAAACTGATGCCTTGT-TTCCTGAAAGGAGTAAATCCATGACTTGCCTTTGTTCAGCTCATGGGCATTCACCCATACACAGAGGAAAAAATAAAACCTACGACTCGGGCACATTT---------------TTTTTTAATGAGCAAGTTTGAGAGTCTGCGGTTTGGACTACCATGAGAATTGATAGGAAGGTGGGAGCCCCAGGCAATCCCGGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103379607 274 - 106955855 GTCTGACCTTTTGCATGGCCTGTTGCCCTGGTGATAAACTGATGCCTTGT-TTCCTAAAAGGAGTAAATCCATGGCTTGCCTTTGTTCAGCTCATGGGCATTCACCCATACACAGACG-AAAAACAAAACCTACGACTCGGGAACATTT-------TTTTTTT-TTTTTAAATCAGCAAATTTGAGAGTCTGCGGTTTAGATTACCGTGACAAGTGATAGGAAGGTGGGAGCCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60682225 253 + 64156825 GTCTGAACTTCTGCATGGCCTGTTGCCCTGGTGATAAA----------------CTAAAAGGAAGAAATCCAGGAGTTGCCTTTGTTCAGCTCA-GGGCATTCACCCATGCACAGAGGAAAAAGTAAAACCTACGACTCAAGTACATTTTC-----------T-TTTTTTAGTGAGCAAGTTTGAGAG--TGCAGTTTGGACTACCATGAGAATTGACAGGAAGGTGGGAGCCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55824505 255 + 59248254 GTCTGAACTTCTGCATGGCCTGTTGCCCTGGTGATAAA----------------CTAAAAGGAAGAAATCCAGGAGTTGCCTTTGTTCAGCTCA-GGGCATTCACCCATGCACAGAGGAAAAAGTAAAACCTACGACTCAAGTACATTTTC-----------T-TTTTTTAGTGAGCAAGTTTGAGAGTCTGCAGTTTGGACTACCATGAGAATTGACAGGAAGGTGGGAGCCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47932240 263 + 51301725 GTCTGAACTTCTGCATGGCCTGTTGCCCTGGTGATAAA----------------CTAAAAGGAAGAAATCCAGGAGTTGCCTTTGTTCAGCTCATGGGCATTCACCCATGcacagaggaaaaagtaaaacctACGACTcaagtacattttc----ttttcttt-ttttttagtgagCAAGTTTGAGAGTCTGCAGTTTGGACTACCATGAGAATTGATAGGAAGGTGGGAGCCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCAAG i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47634767 279 + 50890351 GTCTGAACTTCTGCATGGCCTGCTGCCCCGGTGATAAACTGAGGTCTTGT-TTCCTAAAAGGAAGAAATCCATGAGTTGCCTTTGTTCAGCTGGTGGGCATTCACCCATGCACAGAGGAAAAAGTAAAACCTACGACTCAAGTACCttttc---ttttttttt-ttttttAGTGAGCAGGTTTGAGAGTCTGCAGTTTGGACTACTATGAGAATTGATAGGAAGGGGGGAGCCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 52311 262 + 138250 GTCTGAACTTCTGCATGGCCTGGTGCCCTGGTGATAACCTGATGTCTTGTGTCCCTAAAAGGAATAAATCCATGAGTTGTCTTTGTTCAGCGCATGGACGTTCCCGCGTACACAGAGGAAAAAATAAAACCTACGACTCTGCTGCATTT-------------T-TTTTTAAATGAGCAAGTTTCAGAGTCTGCAGTTTGGA------TGAGAACTGACAGGAAGGCGGGAGCCCCAGGCACTCCCAGGTCCTT--GCAGCAGCTGGTGGAGTTCCCAGTCCACT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I a score=261570.000000 s hg38.chr19_GL949747v2_alt 689659 94 + 729520 CCGTGCAGAGCCTGAACTCAGGATGACACCTGCACCTGCTCTCTGGCTGGGCTCTGGCACAGGAAGCCCTCAGCAAACACCCC-CGGCACAGCCA------- s panTro4.chr19 59956550 87 + 63644993 CCGTGCAGAGCCTGAACTCGGGATGACACCTGCACCTGCTCTCTGGCTGGGCTCTGGCACAGGAAGCC-------AACACCCC-TGGCACAGCCA------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904179 94 + 60714840 CCGTGCAGAGCCTGAACTTGGGATGACACCTGCACCTGCTCTCTGGCCAGACTCTGGCACAGGAAGCCCTCAGCAAACACCCC-TGGCAAGGGCT------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103379881 94 - 106955855 CCGTGCAGAGCCTGAACTCGGGATGACCCCTGCACCTGCTCTCTGGCCGGGCTCTGGCACAGGAAGCCCGCAGCAAACACCCC-TAGCAAGGGCT------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60682478 94 + 64156825 CCGTGCAGAGCCTGAACTCGGGATGACACCTGCACCTGCTCTCTGGCCGGGCTCTGGCACAGGAAGCCCTCAACAAACGCCCC-TGGCAAGGGCT------- i rheMac3.chr19 C 0 I 31 s macFas5.chr19 55824760 94 + 59248254 CCGTGCAGAGCCTGAACTCGGGATGACACCTGCACCTGCTCTCTGGCCGGGCTCTGGCACAGGAAGCCCTCAACAAACGCCCC-TGGCAAGGGCT------- i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47932503 94 + 51301725 CCGTGCAGAGCCTGAACTCGGGATGACACCTGCACCTGCTTTCTGGCCTGGCTCTGGCACAGGAAGCCCTCAGCAAACGCCCC-TGGCAAGGGCT------- i papAnu2.chr19 C 0 I 11 s chlSab2.chr6 47635046 93 + 50890351 CCGTGCAGAGCCTGAACTCGGGATGACACCTGCACCTGCTCTCTGGCC-GGCTCTGGCACAGGAAGCCCTCAGCAAACACCCC-TGGCAAGGGCT------- i chlSab2.chr6 C 0 I 11 s calJac3.chr22_GL285922_random 52573 87 + 138250 CCAGGCAGAGCTTGACCTC-GGATGA------CACGTGCTCTCTGGCCGGGATCTGGCACAGGAAGCCCTCAGCAAGCACCCC-TGGCAAGGGCT------- i calJac3.chr22_GL285922_random C 0 I 11 s canFam3.chr1 20127850 89 - 122678785 CTGTGC-GGGCCTGTCCTCAGGGGTGTTCCGGCAGCT------CGGCCAGGGTATGGCACATGTA------AGTGAACATTCAGCAGCAAGGAACGCACAGC i canFam3.chr1 I 307 C 0 a score=11408.000000 s hg38.chr19_GL949747v2_alt 689753 18 + 729520 ------TGCCATAGCCA-----------GACAACA s panTro4.chr19 59956637 18 + 63644993 ------TGCCATAGCCA-----------GACAACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904273 18 + 60714840 ------GTGCACAGCCA-----------GACAACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103379975 29 - 106955855 ------GTGCACAGCCAGACAACAGCCGGACAACA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55824865 16 + 59248254 --------CAGTGAACA-----------GACAACA i macFas5.chr19 I 11 C 0 s papAnu2.chr19 47932608 16 + 51301725 --------CAGTGAACA-----------GACAACA i papAnu2.chr19 I 11 C 0 s chlSab2.chr6 47635150 16 + 50890351 --------CGGTGAACA-----------GGCAACA i chlSab2.chr6 I 11 C 0 s calJac3.chr22_GL285922_random 52671 14 + 138250 ----------ACGGCCA-----------GACAACA i calJac3.chr22_GL285922_random I 11 C 0 s canFam3.chr1 20127939 24 - 122678785 TGCCACTGATCCAGCCA-----------GGCGACA i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60682572 31 + 64156825 I a score=999757.000000 s hg38.chr19_GL949747v2_alt 689771 355 + 729520 GCTCG--CTGTACCACaccatcatgggagacagc--agtta-ttctgagcatctcactgctgaagaaaccaaggctc-agagag--gacca-tgcatgcacaaggtcccacagGGACCCAAGAATCC-ACCAAGTGT--CAGACAACTTGCCCATGCTCTTCACGGAGCACCTTGGAACCCTCCCCGACAGGCACCGCTGGCTCTCCTGACGTGGCC-TGCAAGTGCACGGAGCCCCTTCCT-CCTCGGCCATTCCCAGTTTAGATTCCCAGGGGAAGCATCAGATGGCC--CCTCTCCCCTGCTGGCAGCAGAGCAGACGGAACCAGCCA--GAGCC----CAGGGCAGTGCTCACCTGCAGGCCAGTCCACTGCG s panTro4.chr19 59956655 355 + 63644993 GCTCG--ccgcaccacaccatcgcgggagacagc--agtta-ttctgagcatctcactgctgaagaaaccaaggctc-agagag--gacca-tgcatgcacaaggtcccacagGGACCCAAGAATCC-ACCAAGTGT--CAGACAACTTGCCCATGCTCTTCACGGAGCACCTTGGAACCCTCCCCGACAGGCACCGCTGGCTCTCCTGACGTGGCC-TGCAAGTGCACGGAGCTCCTTCCT-CCTCGGCCATTCCCAGTTTAGATTCCCAGGGGAAGCATCAGATGGCC--CCTCTCCCCTGCTGGCAGCAGAGCAGGCTGAACCAGCCA--GAGCC----CGGGGCAGTGCTCACCTGCAGGCCAGTCCACTGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904291 348 + 60714840 GCTCA--CTTCACCATACCATCGCGGGAGACAGC--AGTTA-TTCTGAGCACCTCACTGCT---GAAACCAAGGCTC-AGACAG--GACCA-TGCATACACAAGGTCCCAGAGGGACCCAAGAATCC-----AGTGT--CAGACAACTTGCCCATGCTCTTCACCGAGCACCTTGGCGCCCTCCCCCACAGGCACCGCTGGCTCTCCTGACATGGCC-CACAAGCGCACGGAGCCCCTTCCT-CCTCGGCCGTTCGCAGTTTAGATTCCCAGGGGAAGCATCAGATGGCC--CCTCTCCCCTGCTGGCAGCAGAGCAGACGGGACCAGCCA--GAGCC----CGGGGCAGTGCTCACCTGCAGGGCAGTCCACTGCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103380004 347 - 106955855 GCTCA--CCGCACCGCACCATCACGGGAGACAGC--AGTTA-CTCTGAGCACCCCACCGCT---GAAACCAAGGCTC-AGAGAG--GACCA-CGCATGCACAAGGTCCCAGAGGGACCCAAGAATCC-----AGTGT--CAGACAACTTGCCCGTGCTCTTCACGCAGCACCTTGAAGCCCTCCCCCACCGGCACCACCGGCTCTCCTGACATGGCC-CACAAGCGCATGGAGCCCCTGCTT-CCTCGGCCATTCCCGGTTTACATTCCCAGGGGAAGCATCAGATGGCC--CCTCT-CCCTGCTGGCAGCAGAGCAGATGGGACCAGCCA--GAGCC----CAGGGCAGTGCTCACCTGCAGGCCAGTCCACTGCG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60682603 349 + 64156825 GCTCG--CTGCACcacaccatcacgggagacagc--ggtta-ttctgagcacctcaccgctgaagaaaccaaggctc-agagaa--gacccctgcatgcacaaggtcccacgggtacccaagaatcc----gagtgt------cagcttgcccatgctctttgcagagcaccttggagccctccCCCACAGGCACCGCTGGCTCTCCTGACATGGCC-CACAAGTGCATGGAGCCTGTGCCT-CCTCGGCCATTGCCAGTTTAGATTCCCAGGGGAAGCATCAGATGGCC--CCGCTCCCCTGCTGGCAGCAGAGCACATGGGACCAGCCG--GAGCC----CAGGGCAGTGGTCACCCGCGGGCCAGTCCACTGCG i rheMac3.chr19 I 31 C 0 s macFas5.chr19 55824881 353 + 59248254 GCTCA--CCGCACCACACCGTCACGGGAGACAGC--GGtta-ttccgagcacctcaccgctgaagaaaccaaggctc-agagaa--gacccctgcatgcacaaggtcccacgggtaCCCAAGAATCC----GAGTGT--CAGACAGCTTGCCCATGCTCTTTGCGGAGCACCTTGGAGCCCTCCCCCACAGGCACCGCTGGCTCTCCTGACATGGCC-CACAAGTGCACGGAGCCTGTGCCT-CCTCGGCCATTGCCAGTTTAGATTCCCAGGGGAAGCGTCAGATGGCC--CCGCTCCCCTGCTGGCAGCAGAGCACATGGGACCAGCCG--GAGCC----CAGGGCAGTGGTCACCCGCGGGCCAGTCCACTGCG i macFas5.chr19 C 0 I 142 s papAnu2.chr19 47932624 345 + 51301725 GCTCG--CCGCACCACACTGTCACGGGAGACAGC--GGTTA-TTCTGAAGA---AACCgttgaagaaaccaaggctc-agagaa--gaccCTTGTATGCACAAGGTCCCACGGGTACCCAAGAACCC----GAGTGT--CAGACAGCTTGCCCATGCTCTTTGCGGAGCACCCTGGAGCCCTCCCCCACAGGCACCGCTGGCTCTCCTGACATGGCC-CACAAGTACATGGAGCCTGTGCCT-CCTCGGCCATTGCCAGTTTAGATTCCCAGGGGAAGCATCAGATGGCC--CCGCTCCCGTGCTGGCAGCAGAGCACATGGGATCAGCCT--GAGCC---------CAGTGGTCACCCGCAGGCCAGTCCACTGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47635166 354 + 50890351 GCTCG--CCGCACCACACCGTCACGGGAGACAGC--GGTTATTTCTGAGCACCCCACCGCTGAAGAAACCAAGGCTC-AGAGAA--GACCCTTGCATGCACAAGGTCCCACAGGTACCCCAGAATCC----GAGTGT--CAGACAGCCTGCCCATGTTCTTTGCAGAGCACCCTGGAGCCCTCCCCCACAGGCACTGCTGGCTCTCCTGACATGGCC-CACAAGTACACGGAGCCTGTTCCT-TCTCAGCCATTGCCAGTTTAGATTCGCAGGGGAAGCATCAGATGGCC--CCACTCCCCTGCTGGCAGCGGAGCACATGGGACCAGCCA--GAGCC----CAGGGCAGTGGTCACCTGCAGGCCAGTCTACTGCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 52685 356 + 138250 GCGTG--CCACACCACGCCATCACAGGAGGGAGC--AGCTG-TTCTGAGCACCTCACCGCTGGAGAAACCAAGGCTCAAGAGAG--GACCA-TGCGTGTACAACGTCCCACAGGGACCCAGGAATCC-ACCGAGTGT--CAGACACCCTGCCCATGCTCTTCACAGAGCACCTTGGAGCCCACCCCCATGGGCACCGCTGGCTCTCCTGACATCGCC-CACAAGCGCACAGAGACTGTTCCT-CCTCAGCCGTACCCAGTTTAGATTCCCAGAGGAAGTATCAGATGGCC--CTGCTCCCCTGCTGGCAGCAGAGCACACGGGACCAGCCA--GAGCC----CAGGGCAGTGCCCACCTGCAGGCCAGTCCACCGCG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20127963 353 - 122678785 Actcattcatcaccatgctgtcctgtgaggtagtcaggtta-ttctgcaca-ttcacagtgggagaaaccgaggctc-agagaggcgactg-agggtgtgcacggtcccacagggaaccatgaacctgactgggtctggcagacaactttccca------------atggccaCACAGGTCTGCACCGTGGCCACCAGTGGCCCTCCTGACACGGCCACAC-------CGGAGCGGCCTCCTCCCTCAGCGATTCCCAGTTC-CACGCTCAAGGCAGGTGTCTGACGGCCAGATGCGCACCTGCCACTGCCTGAGAAGAAAAGGGCAGCTACTGATCCCTACCAGCGTGACGTGGGCATGGCAACCAGCGTTCTTTG i canFam3.chr1 C 0 C 0 a score=17712.000000 s hg38.chr19_GL949747v2_alt 690126 5 + 729520 GCCAG s panTro4.chr19 59957010 5 + 63644993 GCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904639 5 + 60714840 GCCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103380351 5 - 106955855 GCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60682952 5 + 64156825 GCCAG i rheMac3.chr19 C 0 I 145 s macFas5.chr19 55825376 5 + 59248254 GCCAG i macFas5.chr19 I 142 C 0 s papAnu2.chr19 47932969 5 + 51301725 GCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47635520 5 + 50890351 GCCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53041 5 + 138250 ACCAG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20128316 5 - 122678785 GGCAA i canFam3.chr1 C 0 C 0 a score=108345.000000 s hg38.chr19_GL949747v2_alt 690131 36 + 729520 CACCGCCCCCTAGAACCTACTGCGGGCATGGCGGCC s panTro4.chr19 59957015 36 + 63644993 CACCGCCCCCTAGAACCTACTGCGGGCATGGCGGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904644 36 + 60714840 CACCGCCCCGTAGAGGACGCTGCTGGCTTGGCGGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103380356 36 - 106955855 CACCGCCCCCTAGAGGACGCTGCGGGCATGGCGGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60683102 36 + 64156825 CACCGCCCCCTAGAGGATGCTGCGGGCATGGGGGCC i rheMac3.chr19 I 145 C 0 s macFas5.chr19 55825381 36 + 59248254 CACCGCCCCCTAGAGGATGCTGCGGGCATGGGGGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47932974 36 + 51301725 CACCGCCCCCTAGAGGATGCTGCGGGCATGGGGGCC i papAnu2.chr19 C 0 I 467 s chlSab2.chr6 47635525 36 + 50890351 CACCGCCCCCTAGAGGAAGCTGCGTGCATGGCGGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53046 36 + 138250 CAGTGCCCCCTAGAGGATGCTTCGGTTGTGGCAGCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20128321 36 - 122678785 TACTGCCTCCTAGAGGACCCTCTGGGCATGACAGCA i canFam3.chr1 C 0 C 0 a score=3235.000000 s hg38.chr19_GL949747v2_alt 690167 11 + 729520 GC------------------------------------------------------------------------CAGTCCTGG s panTro4.chr19 59957051 11 + 63644993 GC------------------------------------------------------------------------CAGTCCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904680 83 + 60714840 GCCAGTCCTGGGTCTCCCAGCTCAGGTGGTGCCAGCGCCACCCCCTAGAGGAAGCTACGGGCATGGCGGCCAGGCAGTCCTCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103380392 11 - 106955855 GC------------------------------------------------------------------------CAGTCTTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60683138 11 + 64156825 ------------------------------------------------------------------------GGCAGTCTTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55825417 11 + 59248254 ------------------------------------------------------------------------GGCAGTCTTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47933477 11 + 51301725 ------------------------------------------------------------------------GGCAGTCCTGG i papAnu2.chr19 I 467 C 0 s chlSab2.chr6 47635561 11 + 50890351 ------------------------------------------------------------------------GGCAGTCCTGG i chlSab2.chr6 C 0 I 424 s calJac3.chr22_GL285922_random 53082 11 + 138250 ------------------------------------------------------------------------GGCAATCCTGG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20128357 10 - 122678785 -------------------------------------------------------------------------GTAGTCTTGA i canFam3.chr1 C 0 C 0 a score=26820.000000 s hg38.chr19_GL949747v2_alt 690178 7 + 729520 GTCTCCC s panTro4.chr19 59957062 7 + 63644993 GTCTCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904763 7 + 60714840 GTCTCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103380403 7 - 106955855 GTCTCCC i nomLeu3.chr10 C 0 I 285 s rheMac3.chr19 60683149 7 + 64156825 GTCTCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55825428 7 + 59248254 GTCTCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47933488 7 + 51301725 GTCTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47635996 7 + 50890351 GTCTCCC i chlSab2.chr6 I 424 C 0 s calJac3.chr22_GL285922_random 53093 7 + 138250 GTCTCCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20128367 7 - 122678785 GGCTCGC i canFam3.chr1 C 0 C 0 a score=1320712.000000 s hg38.chr19_GL949747v2_alt 690185 372 + 729520 --------------GGCTCAGGTAGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCGGACAGCTGTCCTCGGTCTGGAGGCGCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGGAGGGGCTGCTCCCTCACAGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCACTTTCAGCCCAAAGCCTCCGGGCCACCTCCTCATCCTCAGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCGGAAACATCCGCCAGTTCCTCCGCCACGGCCAGGTATGTGCTGGGCTGGGCGGCCAGCTCGGGGCTCTTGACCAGCAGCCAGAAGATGGGCCCTGCAATCAGCCCACAGGGCATTTAGTCCACACTCGCTCAGAGAGA s panTro4.chr19 59957069 372 + 63644993 --------------GGCTCAGGTAGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCGGACAGCTGTCCTCGGTCTGGAGGCGCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGGAGGGGCTGCTCCCTCACAGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCACTTTCAGCCCAAAGCCTCTGGGCCACCTCCTCATCCTCAGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCGGAAACATCCGCCAGTTCCTCCGCCACGGCCAGGTATGTGCTGGGCTGGGCGGCCAGCTCGGGGCTCTTGACCAGCAGCCAGAAGATGGGTCCTGCAATCAGCCCACAGGGCATTTAGTCCACACTCGCTCAGAGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904770 372 + 60714840 --------------GGCTCAGGTAGTGCC--------------------------------------------AGGAAGCTGCAGGCATGGCGGACAGCTGTCCTCGGTCTTGCGGCTCCATCCCG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGGAGGGGCTGCTCCCTCACAGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCACTTTCAGCCCAAAGCCTCCGGGCCACCTCCTCATCCTCAGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAATACTTTCCCGAAACATCTGCCAGTTCCTCCGCCACGGCCAGGTATGTGCTGGGCTGGGCAGCCAGCTCGGGGCTCTTGACCAGCAGCCAGAAGATGGGCCCTGCAATTAGCCCACAGGGCATTCAGTCCACACTCGCTCAGAGAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103380695 372 - 106955855 --------------GGCTCAGGTAGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCAGAAAGCTGTCCTCAGTCTTGCGGCTCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGGAGTGGCTGCTCCCTCACAGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCACTTTCAGCCCAAAGCCTCCGGGCCACCTCCTCATCCTCGGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCCGAAACATCTGCCAGTTCCTCCGCCACGGCCAGGTATGTGCTGGGCTGGGCAGCCAGCTCGGGGCTCTTGACCAGCAGCCAGAAGATGGGCCCTGCAATCAGCGTACAGGGCATTCAGTCCACACTCGCTCAGAGAGA i nomLeu3.chr10 I 285 C 0 s rheMac3.chr19 60683156 372 + 64156825 --------------GGCTCAGGTGGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCAGACAGTGGCCCTCGGTCTTGCGGCTCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGAAGGGGCTGCTGCCTCACAGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCGCTTTCAGCCCAAAGCCTCCGGGCCACCTCCTCATCCTCAGCCTCAGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCGGAAACATCCGCCAGTTCCTCTGCCACGGCCAGGTATGTGCTGGGCTGGGCGGCCAGCTCGGGGCTCTTGACCAGCAGCCAGATGATGGGCCCTGCAATCAGCCCACAGGGCGCTCAGTCCACACACGCTCAGAGAAG i rheMac3.chr19 C 0 I 41 s macFas5.chr19 55825435 372 + 59248254 --------------GGCTCAGGTGGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCAGACAGTGGCCCTCGGTCTTGCGGCTCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGAAGGGGCTGCTGCCTCACAGA---------GGGAGC---------CTCTAAGCCTACCAGGCGGGCGCTTTCAGCCCAAAGCCTCCGGGCCACCACCTCATCCTCAGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCGGAAACATCCGCCAGTTCCTCTGCCACGGCCAGGTATGTGCTGGGCTGGGCGGCCAGCTCGGGGCTCTTGACCAGCAGCCAGATGATGGGCCCTGCAATCAGCCCACAGGGCGTTCAGTCCACACACGCTCAGAGAAG i macFas5.chr19 C 0 I 41 s papAnu2.chr19 47933495 370 + 51301725 --------------GGCTCAGGTGGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCAGACAGCGGCCCTCGGTCTTGTGGCTCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAAGTTATCTGGGAAGGGGCTGCTCCCTCACCGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCGCTTTCAGCCCAAAGCCTCCGGGCCACCTCCTCATCCTCAGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCGGAAACATCTGCCAGTTCCTCTGCCACGGCCAGGTATGTGCTGGGTTGGGCGGCCAGCTCGGGGCCCTTGACCAACAGCCAGAAGATGGGCCCTGCAATCAGCGCACAGGGCACTCAGTCCACACACGCTCAGAGA-- i papAnu2.chr19 C 0 I 220 s chlSab2.chr6 47636003 370 + 50890351 --------------GGCTCTGGTGGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCAGACAGCTGCCCTTGGTCTTGCGGCTCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGAAGGGGCTGCTCCCTCACAGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCGCTTTCAGCCCAAAGCCTCCGGGCCACCTCCTCATCCTCAGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCGGAAACGTCCGCCAGTTCCTCTGCCACAGCCAGGTATGTGCTGGGCTGGGCGGCCAGCTCGGGGCTCTTGACCAGAAGCCAGAAGATGGGCCCTGCAATCAGCGCACAGGGCACTCAGTCCACACACGCTCAGAGA-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53100 394 + 138250 --------------GGCTCAGGTGGTGCC-----------------------------AACACCGCCCCCTAGAGGATGCTGTGGGTGTGGCGGACAGCGGTGCTCGGTCTCGTGGCTCCATCCTGGAGC-CTGTCTTCATCCTCGCTTTCAAATCTCCTTCC-GAGGTTATCTGGGAAGGGGCTGCTCCCTCACAGAGGACACATGGGACGC---------CTCCAAGCCCACCAGGCGCGCACTTTCAGCCCAAAGCCGCCGGGCCACCTCCTCATCCTCAGCCTCGGGGGCTGGGGCCTTCTGTTTGAGTCCATCAAAGTACTTTCCGGAAACATCCGCCAGTTCCTCCGCCACGGCCAGGTATGTACTGGGCTGGGCAGCCAGCTCGGGGCTCTTGACCAGCAGCCAGAAGATGGGTCCTGCAATCAGC----------------CCACACACACTCAGA---- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20128374 459 - 122678785 ACAAACTACACTGCCACCTAGAGGGTGACGTGGGCATCTCGGTCAGCGTTCCGTGGGCAACACTGCCACCCAGAGGACGCTGCAGACAGAGCAGCCAGCTTGGGTTGGCCTTGCGGCTCCATCCTGGTACTCCGCCTCCCACGTGGTTTTCACACCTGCTCCCTGAGATTATTTAGGGAGGGGCTGCCCCCTCACTGA---------GGAAACACCTGACATCTCCAAGCCCACCAAGCGGGCACTTTCAGCCCAAAGCCTCTGGGCTACCTCTTCATCCTCAGCTTCCGGGGCTGGAGCCTTCTCTTTGAGTCCATCAAAGTACTTTCCAGAAACACCCTCCAATTCCTCTGCCACGGCCAGGTACGTGCTGGGCTGGGCTGCCAGCTGGGGGCTCTTGACCAACAGCCAGAAGATGGGCCCTGCAATCAGCCCACAGAGCATTCAGTCCACACACGTTCAGGGAGG i canFam3.chr1 C 0 C 0 a score=842802.000000 s hg38.chr19_GL949747v2_alt 690557 291 + 729520 --AGGAAGGAAGCCCCGCTCCCCGGTCAG----------------------GGAGCTCCGGGTCC----------CTGGAGTCCCACAGAGccctcctctagccctttcccctt--ggctgcctccatctgcagttcccttccctggcactgcccaggcaaatcccaccagac-cagggatcagaccaaaagctgcctcccccaaggagccttcctggctttg-tccaggaaaatggaagctctcttcctcttggtcagcccc-agtcctcaccctaccccatttctc------------ctt-taataac---at---cttattaaatgCACCTGGCACCAGCCTCAG s panTro4.chr19 59957441 303 + 63644993 --AGGAAGGAAGCCCCGCTCCCCGGTCAG----------------------GGAGCTCCGGGTCC----------CTGGAGTCCCACAGAGccctcctctagccctttcccctt--ggctgcctccatctgcagttcccttccctggcactgcccaggcaaatcccaccagac-cagggatcagaccaaaagctgcctcccccaaggagccttcctggctttg-tccaggaaaatggaagctctcttcctcctggtcagtccc-agtcctcaccctaccCCATTTCTCcttaaataacatctt-aaataac---at---cttaTTAAATGCACCTGGCACCAGCCTCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905142 272 + 60714840 --AGGGAGGA-------------------------------------------AGCTCCGGGCCC----------CTGGAGTCCCACAGAGccctcctctagccctttcccctt--ggctgcctccatctgcagttcccttccttggcactgcccaggcaaatcccaccagac-cagggatcagaccaaaagctgcctaccccaaggagccttcctggctttg-tccaggaaaatggaagctctcctcctcctggtcagcccc-agtcctcatcctaccCCATTTCTC------------CTT-AAATAAC-TTAA---CTTATTAAATGCACCTGGCACCAGCCTCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103381067 283 - 106955855 --AGGGAGGAAGCCCCACTCCCCCATCAG----------------------GGAGCTCCAGGCCC----------CTGGAGTCCCACAGAGccctcctctagccctttcccctt--ggctgcctccatctgcagttcccttccctggcactgcccaggcaaatcccaccggac-cagggatcagaccaaaagctgcctcccccaagaagccttcctggctttg-tccaggaaaatggaagctc---tcctcctggtcagcccc-agtcctcaccctaccCCATTTCTC------------CTT-AAATAAC-TTAT---CTTATTAAAT-------GCACCAGCCTCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60683569 287 + 64156825 --AGCGAGGAAGCCCCACTCCCCCGTCAG----------------------GGAGCTCCGGGCCC----------CTGGAGTCCCACAGAGccctcctccagccccttcccctt--ggctccctccatctgcagttcccttccctggcactgcccaggctaatccctccagac-cagggatcagaccagaaactgcctcccccaaggagccctcctggctttg-tccaggaaaatggaagctgtcctcctctt----agcccc-agtcctcaccctatcccatttctc------------ctt-aaataac---tt---cttattaaATGCACCTAGCACCAGCCTCAG i rheMac3.chr19 I 41 C 0 s macFas5.chr19 55825848 287 + 59248254 --AGCGAGGAAGCCCCACTCCCCCGTCAG----------------------GGAGCTCCGGGCCC----------CTGGAGTCCCACAGAGCCCTCCTCCAGCCCCTTCCCCTT--GGCTCCCTCCATCTGCAGTTCCCTTCCCTGGCACTGCCCAGGCTAATCCCTCCAGAC-CAGGGATCAGACCAGAAACTGCCTCCCCCAAGGAGCCCTCCTGGCTTTG-TCCAGGAAAATGGAAGCTCTCCTCCTCTT----AGCCCC-AGTCCTCACCCTATCCCATTTCTC------------CTT-AAATAAC---TT---CTTATTAAATGCACCTAGCACCAGCCTCAG i macFas5.chr19 I 41 C 0 s papAnu2.chr19 47934085 284 + 51301725 --AGCAAGGAAGCCCCACTCCCCCGTCAG----------------------GGAGCTCCGGGCCC----------CTGGAGTCCCACAGagccctcctccagccccttcccCTT--GGCTCCCTCCATCTGCAGTTCCCTTCCCTGGCACTGCCCAGGCTAATCCCTCCAGAC-CAGGGATCAGACCAGAAGCTGCCTCCCCCAAGGAGCCCTCCTGGCTTTG-TCCAGGAAAATGGAAGCTCTCCTCCTCTT----AGCCCC-AGTCCTCACCCTACCCCATTTCTC------------CTT-AAATAA---------CTTACTAAATGCACCTAGCACCAGCCTCag i papAnu2.chr19 I 220 C 0 s chlSab2.chr6 47636373 278 + 50890351 --AGTGAGGAAGCCCCACAACCCCGTCAA----------------------GGAGCTCCGGGCCC----------CTAGAGTCCCACAGAGCCCTCCTCCAGCCCCTTCCCTTT--GGCTGCCTCCATCTGTAGTTCCCTTCCCTGGCACTGCCCAGGCTAATCCCT-------------TCAGACCAGAAGCTGCCTCCCCCAAGGAGCCCTCCTGGCTTTG-TCCAGGAAAATGGAAGCTCTCCTCCTCTT----AGCCCT-AGTCCTCACCCTACCCCATTTCTC------------CTT-AAATAAC---TTACACTTATTAAATGCACCTAGCACCAGCCTCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53494 270 + 138250 --AGTCAGGAAGCCCCACTCCCCCATCAG----------------------GGAGCTCCAGGCCC----------CTGGAGTCCCACAGAGCCCTCCTCCAGCCCCTTACCCTT--GGCT---CCCATCTGCAGTTCCCTTCCCTGGTACCGCCCTGGCAAATCCCTCCCGAC-CAGGGGTCACGCCAAAAGCTGCCT-CCCTAAGAAGCCTTCCTGGCTTTG-CCCGGGAAAATGAAAGCTCTCCTCCT--TGGTCAGCCCC-AGTATTCACCCTACCCCATTTCTC-------------------------------CT---TAAATGCACCTGGCACCAGCCTCAG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20128833 324 - 122678785 AGGACATGAACACCCTACTCTCCCCCCAACACCCCCACCCCAGGGTTGCCTGGGGCCCAGAGGCCAGAGGTGACACTGCAGTCCCACACAGcccacctccaggcctgtgcctctgaggttccctccaccaggagctcctttccctggcactgcccagccaaatccctccagacatagagaccagcccaaatggggcctcttccagcaagcctccccagcttttccccaggcaaatggaggctc----------agtcatctctgagtccttaccctatcccaccttgc------------tttaaaatagctttta---tttattaaatgtctCTGGGGCCAGGCTCAG i canFam3.chr1 C 0 C 0 a score=26811.000000 s hg38.chr19_GL949747v2_alt 690848 17 + 729520 GTTAAGGA-----TCTTTTTTT s panTro4.chr19 59957744 18 + 63644993 GTTAAGGA----TTTTTTTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905414 19 + 60714840 GTTAAGGA---TTTTTTTTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103381350 16 - 106955855 GTTAAGGA------TTTTTTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60683856 22 + 64156825 GTTAAGAAtttttttttttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55826135 18 + 59248254 GTTAAGAA----TTTTTTTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47934369 21 + 51301725 gttaataa-ttttttttttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47636651 20 + 50890351 GTTAGGAA-TTTTTTTTTTTT- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53764 22 + 138250 GTTAATTTTTGTTTCTTTTTTT i calJac3.chr22_GL285922_random C 0 I 144 e canFam3.chr1 20129157 0 - 122678785 C a score=305729.000000 s hg38.chr19_GL949747v2_alt 690865 134 + 729520 ggccaggcgaggtggctcaggcctgtaatcccagcactttgggaggccgaggcgggcggattacctggggtcgggagttccagaccagcctggccaacatggtgaaaccccatttctactaaaaatacaaaaat s panTro4.chr19 59957762 134 + 63644993 ggccaggcgaggtggctcaggcctgtaatcccagcacttcgggaggccgaggtgggcggatcacctagggtcgggagttccagaccagcctggccgacatggtgaaaccccatttctactaaaaatacaaaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905433 134 + 60714840 ggccaggcgaggtggctcaggcctgtaatctcagcacttcgggaggctgaggcgggcggataacctggggtcgggagttccagaccagcctggccaacatggtgaaaccccatttctactaaaaatacaaaaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103381366 134 - 106955855 ggccaggcgaggtggctcaggcctgcaattctaccactttgggaggccgaggcgggtggattacctggggtcgggagttccagaccagcctggccaacatggtgaaaccccatttctattaaaaatacaaaaat i nomLeu3.chr10 C 0 M 115 s rheMac3.chr19 60683878 134 + 64156825 ggccaggcgaggtggctcaggcctgtaatcacagcacattgggaggccgaggcaggcggatcgcctggggtcaggacttccagaccaccctcgccaacatgatgataccccatttctactaaaaatacaaaact i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55826153 134 + 59248254 ggccaggcgaggtggctcaggcctgtaatcacagcacattgggaggccgaggcaggcggatcgcctggggtcaggacttccagaccaccctcgccaacatgatgataccccatttctactaaaaatacaaaact i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47934390 133 + 51301725 ggccaggcaaggtggctcaggcctgtaatcacagcacattgggaggccgaggcaggcggatcgcctggggtcaggacttccagaccagcctggtcaacatgatgaaaccccatttctact-aaaatacaaaatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47636671 129 + 50890351 -----ggcgaggtggctcaggcctgtaatcccagcacattgggaggccgaggcaggcggatcgcctggggtcaggacttccagaccagcctggtcaacatgatgaaaccccatttctactaaaaatacaaaaat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=80001.000000 s hg38.chr19_GL949747v2_alt 690999 50 + 729520 taact-gggtgtggtggcgggtgcctgtaatcccagctgctcgggaggctg s panTro4.chr19 59957896 50 + 63644993 taact-gggtgtggtggcgggtgcctgtaatcccagctgctcgggaggctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905567 50 + 60714840 taact-gggtgtggtggcgggtgcctgtaatcccagctgctcgggaggctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60684012 50 + 64156825 tagcc-aggcatggtggtgggtgcctgtaatcccagctgcttgggaggctg i rheMac3.chr19 C 0 I 597 s macFas5.chr19 55826287 49 + 59248254 tagcc-aggcatggtggtgggtgcctgtaatcccagctgcttgggaggct- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47934523 51 + 51301725 aagcctgggcgtggtggtgggtgcctgtaagcccagctgtttgggaggctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47636800 50 + 50890351 tagct-gggcttggtggtgggtgcctgtaatcccagctgcttgggagcctg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I e nomLeu3.chr10 103381500 115 - 106955855 M a score=105409.000000 s hg38.chr19_GL949747v2_alt 691049 106 + 729520 gggcaggagaatcccttgaacctgggaggcggaggttgcagtgagctaagatcacaccattgcactccagcctgggtgacaatagcaagacttcgtctcaaaaaaa s panTro4.chr19 59957946 102 + 63644993 gggcaggagaatcccttgaacctgggaggtggaggttgcagtgagctaagatcacaccattgcactccagcctgggtgacaatagcaagacttcgtctc----aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905617 99 + 60714840 gggcaggagaatcccttgaacttgggaggcagaggttgcagtgagctgagatcacactattgcactccagcctgggtgacaatagcaagactttgtctc------- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55826336 75 + 59248254 -------------------------------aaggttgcagtgagccaaggtcgcaccattgcactccagcctgggtgacaagagcaaaactccatctcaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47934574 106 + 51301725 aggcaggagaatcccttgaacccaggaggcggaggttgcagtgagccaaggtcgcaccattgcactccagcctgggtgacaagagcaaaactccatctcaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47636850 106 + 50890351 aggcaggagaatcccttgaacccaggaggcggaggttgcagcgagccaagatcgtgccattgcactccagcctgggtgacaagagcaaaattccatctcaaaaaaa i chlSab2.chr6 C 0 I 477 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I e nomLeu3.chr10 103381500 115 - 106955855 M e rheMac3.chr19 60684062 597 + 64156825 I a score=1018.000000 s hg38.chr19_GL949747v2_alt 691155 3 + 729520 aaa s panTro4.chr19 59958048 3 + 63644993 aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905716 3 + 60714840 aaa i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55826411 3 + 59248254 ata i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47934680 3 + 51301725 taa i papAnu2.chr19 C 0 I 400 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I e nomLeu3.chr10 103381500 115 - 106955855 M e chlSab2.chr6 47636956 477 + 50890351 I e rheMac3.chr19 60684062 597 + 64156825 I a score=546.000000 s hg38.chr19_GL949747v2_alt 691158 1 + 729520 a s panTro4.chr19 59958051 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905719 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55826414 1 + 59248254 a i macFas5.chr19 C 0 I 385 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I e nomLeu3.chr10 103381500 115 - 106955855 M e chlSab2.chr6 47636956 477 + 50890351 I e papAnu2.chr19 47934683 400 + 51301725 I e rheMac3.chr19 60684062 597 + 64156825 I a score=9658.000000 s hg38.chr19_GL949747v2_alt 691159 38 + 729520 aaaaaaaGggctgggcgtggtgactcacgcctgtaatc s panTro4.chr19 59958052 38 + 63644993 aaaaGGGGggctgggtgtggtgactcacgcctgtaatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905720 38 + 60714840 aaaaaaGGGGCTGGGTGTGATGACTCACGCCTGTAATC i ponAbe2.chr19 C 0 M 596 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I e nomLeu3.chr10 103381500 115 - 106955855 M e chlSab2.chr6 47636956 477 + 50890351 I e papAnu2.chr19 47934683 400 + 51301725 I e macFas5.chr19 55826415 385 + 59248254 I e rheMac3.chr19 60684062 597 + 64156825 I a score=29844.000000 s hg38.chr19_GL949747v2_alt 691197 348 + 729520 ccagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcaagaccagcctggccaacgtgtgaaaccctgtctcaactaaaaataaaaacttagctgggtgtggtggtgggcgcctgcaatctcagctactttgggaggctgagacaggagaatcacttgaaccgaggaggcagaggttggagtgagccaagattgtgccactgcactccagcctgggtgac--gagcaaaactccgtctc--aaaaaaaaaaagaCAtttatttatttatttattgagacctggtgtcttgctctgtcacccaggctggagtgcagtggtgtgatctcagctcactgcaa s panTro4.chr19 59958090 344 + 63644993 ccagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcaagaccagcctggccaacgtgtgaaaccctgtctcaactaaaaataaaaacttagctgggtgtggtggtgggcgcctgcaatctcagctactttgggaggctgagacaggagaatcacttgaaccgaggaggcagaggttggagtgagccaagattgtgccactgcactccagcctgggtgacaagagcaaaactccgtctcaaaaaaaaaaaaagacattta-------atttattgaaacctggtgtcttgctctgtca-ccaggctggagtgcagtggcgctatctcggctcactgcaa i panTro4.chr19 C 0 C 0 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I e nomLeu3.chr10 103381500 115 - 106955855 M e chlSab2.chr6 47636956 477 + 50890351 I e papAnu2.chr19 47934683 400 + 51301725 I e macFas5.chr19 55826415 385 + 59248254 I e rheMac3.chr19 60684062 597 + 64156825 I a score=1522.000000 s hg38.chr19_GL949747v2_alt 691545 7 + 729520 cctctgc s panTro4.chr19 59958434 7 + 63644993 cctctgc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103381619 7 - 106955855 cttttgc i nomLeu3.chr10 M 115 C 0 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I e chlSab2.chr6 47636956 477 + 50890351 I e papAnu2.chr19 47934683 400 + 51301725 I e macFas5.chr19 55826415 385 + 59248254 I e rheMac3.chr19 60684062 597 + 64156825 I a score=7006.000000 s hg38.chr19_GL949747v2_alt 691552 11 + 729520 ctcccgggttc s panTro4.chr19 59958441 11 + 63644993 ctccctggttc i panTro4.chr19 C 0 I 472 s nomLeu3.chr10 103381626 11 - 106955855 ctcccgggttc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55826800 11 + 59248254 ctcccgacctc i macFas5.chr19 I 385 C 0 s papAnu2.chr19 47935083 11 + 51301725 ctcccgacctc i papAnu2.chr19 I 400 C 0 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I e chlSab2.chr6 47636956 477 + 50890351 I e rheMac3.chr19 60684062 597 + 64156825 I a score=20659.000000 s hg38.chr19_GL949747v2_alt 691563 65 + 729520 aagcgattctcctgcctcagcctcctgagtagctgggactacaggtgcacaccaccacacctggc s nomLeu3.chr10 103381637 65 - 106955855 aagagattctcctatctcagcttcctgcgtagctgggagttcaggtgcacgccaccacgcctggc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55826811 65 + 59248254 aggtgatctgcccgccttggcctcccaaagtgctgagattacagatgtgagccatcccgcccagc i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47935094 65 + 51301725 aggtgatctgcccgcctcggcctcccaaagtgctgagattacagatgtgagccatcacgcccagc i papAnu2.chr19 C 0 I 2 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I e chlSab2.chr6 47636956 477 + 50890351 I e rheMac3.chr19 60684062 597 + 64156825 I e panTro4.chr19 59958452 472 + 63644993 I a score=18522.000000 s hg38.chr19_GL949747v2_alt 691628 25 + 729520 taatttttgtatttttagtagagac s nomLeu3.chr10 103381702 25 - 106955855 taatttttgtatttttagtagagac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55826878 25 + 59248254 taatttttgtatttttaatagagat i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47935161 22 + 51301725 taatttttgta---ttaatagagat i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47637433 25 + 50890351 taatttttgtatttttaatagagat i chlSab2.chr6 I 477 C 0 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I e rheMac3.chr19 60684062 597 + 64156825 I e panTro4.chr19 59958452 472 + 63644993 I a score=4500.000000 s hg38.chr19_GL949747v2_alt 691653 3 + 729520 ggg s panTro4.chr19 59958924 3 + 63644993 ggg i panTro4.chr19 I 472 C 0 s nomLeu3.chr10 103381727 3 - 106955855 ggg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55826903 3 + 59248254 ggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47935183 3 + 51301725 ggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637458 3 + 50890351 ggg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I e rheMac3.chr19 60684062 597 + 64156825 I a score=104145.000000 s hg38.chr19_GL949747v2_alt 691656 61 + 729520 gtttcaccatggtggccaggctggtctcgaactcctgacctgaggtaatccgcccaccaca s panTro4.chr19 59958927 61 + 63644993 gtttcaccatattggtcaggctagtctcaaactcctgacctcaggtgatccaactgcctct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103381730 61 - 106955855 gtttcaccatggtggccaggctggtctcgaactcctgacctgaggtaatctgcccaccaca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60684659 61 + 64156825 gtttccccatggtggccaggctggtctcgaactcctgacctgaggtaatctgcctgccaca i rheMac3.chr19 I 597 C 0 s macFas5.chr19 55826906 61 + 59248254 gtttcaccatggtggccaggctggtctcgaactcctgacctgaggtaatccgcctgccaca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47935186 61 + 51301725 gtttcaccatggtggccaggctggtctcgaactcctgacctgaggtaatccgcctgccaca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637461 61 + 50890351 gtttatccatggtggccaggctggtctcgaacccctgacctgaggtaatccgcctgccaca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=109965.000000 s hg38.chr19_GL949747v2_alt 691717 47 + 729520 gcctcccaaagtgctgggattacaggcgtgGCTATTAGCCTCGCCAA s panTro4.chr19 59958988 47 + 63644993 gcctcccaaagtgctgggattacaggcgtgGCTATTAGTCTCGCCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906354 47 + 60714840 GCCTCCCAAAGTCCTGGTATTACAGGCGTGGCTATTAGCCTCGCCAA i ponAbe2.chr19 M 596 C 0 s nomLeu3.chr10 103381791 47 - 106955855 gcctcccaaagtgcagggattacaggcgtgGCTATTAGCCTCGCCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60684720 47 + 64156825 gcctcccacagtgctgggattacaggcatggctattagcctggccAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55826967 47 + 59248254 gcctcccacagtgctgggattacaggcatgGCTATTAGCCTGGCCAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47935247 47 + 51301725 gcctcccgcagtgctgggattacaggcatggctaTTAGCCTGGCCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637522 47 + 50890351 gcctcccgaagcgctgggattacaggcatgGCTATTAGCCTGGCCAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=202761.000000 s hg38.chr19_GL949747v2_alt 691764 70 + 729520 GTTAAGATTCTTGATGCCAACCAATCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTCATAAAGC s panTro4.chr19 59959035 70 + 63644993 GTTAAGATTCTTGATGCCAACCAATCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTTATAAAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906401 70 + 60714840 GTTAAGATTCCTGATGCCAACCACTCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTTATAAAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103381838 70 - 106955855 GTTAAGATTCTTGATGCCAACCAATCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTTATAAAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60684767 70 + 64156825 GTTAAGATTCTTGATGCCAACCACTCACCCACTCCATGTTTTTCAGGATTATAAAACCTAGTTATAAAGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55827014 70 + 59248254 GTTAAGATTCTTGATGCCAACCACTCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTTATAAAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47935294 70 + 51301725 GTTAAGATTCTTGATGCCAACCACTCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTTATAAAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637569 70 + 50890351 GTTAAGATTCTTGATACCAACCACTCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTTATAAAGC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20129157 70 - 122678785 CTTAAAATCCTTGCTATCTGGCAACCACCCAGTAAATGATTTTCAGGATTACAAATACTAGTTCTAAAGT i canFam3.chr1 C 0 I 252 e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=593852.000000 s hg38.chr19_GL949747v2_alt 691834 247 + 729520 ATGAACTGCctgggggt--ggtggctcacacctgtaatcccagcactttgggaggcag------ttggatcacctgaggtcaggagtttgagactagcctgaccaatatggtgaaaccccacctc------------------tagctgggtgtggtggtgtgcacctgtaatcccagctacttggagacaggagaatcgcttgaacctgggaggtggaagttgcagtgagtggagatcatgccattgtactccagcctgggcgacagagcaa s panTro4.chr19 59959105 253 + 63644993 ATGAACTGCCTAggggt--ggtggctcacgcctgtaatcccagcactttgggaggcagaggcagttggatcacctgaggtcaggagtttgagactagcctgaccaatatggtgaaaccccacctc------------------tagctgggcgtggtggtgtgcacctgtaatcccagctacttggagacaggagaatcgcttgaacctgggaggtggaagttgcaatgagtggagatcatgccattgtactccaccctgggcaacagagcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906471 255 + 60714840 TTGAACTGGCTGGgggtgaggtggctcacacctgtaatcccagcactctgggaggccgaggcagttggatcacctgaggtcaggagttcgagaccagcctgaccaatatggtgaaaccccacctc------------------tagctgggcgtggtggtgtgcacctgtaatcccagctacttggagacaggagaatcacttgaacctgggaggtggaagttgcagtgagtgcagatcatgccattgtactccagcctgggtgacagagcaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103381908 253 - 106955855 TTGAACTggctggaggt--ggtggctcgcgcctgtaatcccagcactatgggaggctgaggcagttggatcacttgaggtcaggagttcgagaccagcctgaccaatatggtgaaaccccacctc------------------tagctgggcgtggtggtgtgcacctgtaatcccagctacttggagacaggagaatcgcttgaacctgggaggtggaagttgcagtgagtggagatcatgccattgtactccagcccgggcgacagagcaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60684837 271 + 64156825 TTCAACTggctgggggt--ggtggctcacgcctgtaatctcagcactttgggaggctgaggcaggtggaccacctgaggtcaggagttcaagaccagcctgaccaatatggtgaaaccccacctctactaaaaataccaaaattagctgggtgtggtggtgtgcacctgtaatcccagctacttggagacaggagaatcgcttgaacctaggaggtggaagttgcagtgagtcaagatcgtgcccttgtagtcaagcctgggtgacagagcaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55827084 271 + 59248254 TTCAACTggctgggggt--ggtggctcacgcctgtaatctcagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcgagaccagcctgaccaatatggtgaaaccccacctctactaaaaataccaaaattagctgggcgtggtggtgtgcacctgtaaccccagctacttggagacaggagaatcgcttgaacctaggaggtggaagttgcaatgagtcaagatcgtgccattgtagtcaagcctgggtgacagagcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47935364 271 + 51301725 TTCAactggctgggggt--ggtggctcaggcctgtaatctcagcactttgggaggctgaggcaggtggatcacctgaggtcaggagtttgagaccagcctgaccaatatggtgaaaccccacctctactaaaaataccaaaattagctgggcatggtggtgtgcacctgtaaccccagctacttggagacaggagaatcgcttgaacctaggaggtggaagttgcaatgagtcaaCATCGTGCCATTGTagtcaagcctgggtgacagagcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637639 271 + 50890351 TTGAACTggctgggggt--ggtggctcatacctgtaatctcagcactttgggaggctgaggcaggtggatcaccagaggtcaggagttcgagaccagcctgaccaatatggtgaaaccccacctctactaaaaataccaaaattagctgggcgtggtggtgtgtacctgtaatcccagctacttggagacaggagaatcacttgaacctaggagttggaagttgcagtgagtcaagatcgtgccattgtagtcaagcctgggtgacagagcaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20129227 252 - 122678785 I e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=45888.000000 s hg38.chr19_GL949747v2_alt 692081 20 + 729520 gacttcatctcaaaaataaG s panTro4.chr19 59959358 20 + 63644993 gacttcatctcaaaaataaG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906726 20 + 60714840 gacttgatctcaaaaataaG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382161 20 - 106955855 gacttcatctcaaaaataaG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685108 20 + 64156825 gacttcatctcaaaaatata i rheMac3.chr19 C 0 I 4 s macFas5.chr19 55827355 18 + 59248254 gacttcatctcaaaaata-- i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47935635 20 + 51301725 gacttcatctcaaaaatata i papAnu2.chr19 C 0 I 341 s chlSab2.chr6 47637910 20 + 50890351 gacttcatctcaaaaataaa i chlSab2.chr6 C 0 I 1 s canFam3.chr1 20129479 20 - 122678785 ttttttatattaaaaaaaaA i canFam3.chr1 I 252 C 0 e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=7874.000000 s hg38.chr19_GL949747v2_alt 692101 5 + 729520 -TAagt s panTro4.chr19 59959378 5 + 63644993 -TAagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906746 5 + 60714840 -TAagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382181 5 - 106955855 -TAagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685132 5 + 64156825 -taaat i rheMac3.chr19 I 4 C 0 s macFas5.chr19 55827376 5 + 59248254 -taaat i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47935996 5 + 51301725 -taaat i papAnu2.chr19 I 341 C 0 s chlSab2.chr6 47637931 5 + 50890351 -taaat i chlSab2.chr6 I 1 C 0 s canFam3.chr1 20129499 5 - 122678785 AAAAA- i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=136968.000000 s hg38.chr19_GL949747v2_alt 692106 49 + 729520 aaagctccaactgtttgttccacctattctctgggcggggtcctgtgct s panTro4.chr19 59959383 49 + 63644993 aaagctccaactgtttgttccacctattctctgggcagggtcctgtgct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906751 49 + 60714840 aaagctccaactgtttattccacctattctctgggtggtgtactgtgct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382186 49 - 106955855 aaagctccaactgtttgttccacctattctctgggcagggtactgtgct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685137 49 + 64156825 aaaGCTccaactgtttattccgcctgttctctgggcagggcactgtgct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55827381 49 + 59248254 aaaGCTCCAACTGTTTATTCCGCCTGTTCTCTGGGCAGGGCACTGTGCT i macFas5.chr19 C 0 I 471 s papAnu2.chr19 47936001 49 + 51301725 aaagctccaACTGTTCATTCCGCCTGTTCTCTGGGTGGGGCACTGTGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637936 49 + 50890351 aaaGCTCCAactgtgtattccgcctgttctctgggcagggcactgtgct i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53930 49 + 138250 aaggCTGCAACTGTTTATACAGCCTATTCTCTGGGTGGGTCACGGTGCT i calJac3.chr22_GL285922_random I 144 C 0 s canFam3.chr1 20129504 22 - 122678785 AAAGCT---------------------------Ggtcaggccctgggct i canFam3.chr1 C 0 C 0 a score=2552.000000 s hg38.chr19_GL949747v2_alt 692155 1 + 729520 g s panTro4.chr19 59959432 1 + 63644993 g i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906800 1 + 60714840 g i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382235 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685186 1 + 64156825 a i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47936050 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637985 1 + 50890351 g i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53979 1 + 138250 G i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20129526 1 - 122678785 g i canFam3.chr1 C 0 C 0 e macFas5.chr19 55827430 471 + 59248254 I a score=1049056.000000 s hg38.chr19_GL949747v2_alt 692156 354 + 729520 gccctttcaaggaaggtctcgtataacccccccagtgactgtgaggtgagtcctattaaggcctgcactctgcagatgaagaaac--aggct-------------------cagaggggtaacagctcttccccaggaggtgcagctggtttggggtgaagctggagttaccctgagtacagcctgactccaggcgtcagctccacggcctcttcctctgAGACACGGTTTTCTCATCCGCCAGCAGGGCTCT-GCCTGCTTCCCGGGGCTGTTA-GAGGCTGGCAGGCCAGGTCAACGGAGGAAAGGGACCTGTGCTCTGTGCCTCAGAAGACGTAGGCGAGGAGCAGGCATGAGGCCTCAGGGACGGTCTCTGAG s panTro4.chr19 59959433 354 + 63644993 gccctttcaaggaaggtctcgtataacccccccagtgactgtgaggtgagtcctattaaggcctccactctgcagatgaagaaac--aggct-------------------cagaggggtaacagctcttccccaggaggtacagctggtttggggtgaagctggagttaccctgagcacagcctgactccaggcgtcagctccacggcctcttcctctgAGACACGGTTTTCTCATCCGCCAGCGGGGCTCT-GCCTGCTTCCCGGGGCTGTTA-GAGGCTGGCAGGCCAGGTCGACGGAGGAAAGGGACCTGTGCTCTGTGCCTTGGAAGACGTAGGCAAGGAGCAGGCATGAGGTCTCAGGGACCGTCTCTGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906801 354 + 60714840 gcgctttcaaggaaggtctcgtctaaccatcccactgactgtgaggtgagtcctattaaggcctccactctgcagatgaagaaac--aggct-------------------cagaggggtaacagctcttccccaggaggcgtagctggtttggggtgaagctggagttaccctgagcacagcctgactccaGGAGTCAGCTCCACAGCCTCTTCCTGTGAGACACGGTTTTCTCATCAGCCAGAGGGCCTCT-GCCTACTTCCCGGGGCTGTTA-GAGGCTGGCAGGCCAGGTCGACAGAGGAAAGGGACCTGTGCTCTGTGCCTCAGAAGACACAGGCGAGAAGCAGGCATGAGGCCTCAGGGACCGTCTCTGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382236 353 - 106955855 gccctttcaaggacggtctcgtctaaccctcccagtgactgcgaggtaagtcctattaaggcctactctctgcagaggaagaaac--aggct-------------------cagaggggtaacagctcttccccaggaggcgcagct-gtttggggtgaagctggagttacgctgagcacagcctgactctaGGAGTCAGCTCCACGGCCTCTTCCTCTGAGACACGGTTTTCTCATCTGCCAGCGGGGCTCT-GCCTGCTTCCCGGGGCTGTTA-GAGGCTGGCAGGCCAGGTCGACAGAGGAAAAGGACCTGTGCTCTGTGCCTCGGAAGATGCAGGTGAGGAGCAGGCATGAGGCCTCAGGGACTGTCTCTGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685187 352 + 64156825 gcccttttaaggaaggtcttgtctaaccctcccagtgcctgtgaggtgagtcctgttatggcctccactctgcagatgaagaaac--aggct-------------------cagaggggtaacagcacttccccaggaggcgcggctggtttggggtgaagctggagttaccctgaacacagtctgactccaggagtcagtTCCACGGCCTCTTCCTCTGAGACACGGTTTTCTCATCGGCCAGCTGGTCTCT-GCCTGCTTCCTGAGGCTATTA-GAGGTTGGCAGGCCAGGTCGACAGAGGAAAGGGACCCGT--CCTGTGCCTCAGAAGACACAGGTGAGGAGCAGGCATGCGGCCCCAGGGACCGTCTCTGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55827901 351 + 59248254 GCCCTTTTAAGGAAGGtcttgtctaaccctcccagtgcctgtgaggtgagtcctgttatggcctccactctgccgatgaagaaac--aggct-------------------cagaggggtaacagcacttccccaggaggcgcggctggtttggggtgaagctggagttaccctgagcacagtctgactccaggagtcagttccacggcctc-tcctctgagacacgctTTTCTCATCGGCCAGCTGGTCTCT-GCCTGCTTCCTGAGGCTGTTA-GAGGTTGGCAGGCCAGGTCGACAGAGGAAAGGGACCCGT--CCTGTGCCTCAGAAGACACAGGCGAGGAGCAGGCATGCGGCCCCAGGGACCGTCTCTGAG i macFas5.chr19 I 471 C 0 s papAnu2.chr19 47936051 351 + 51301725 GCCCTTTTAAGGAAGGTCTTGTCTAACCCTCCCAGTGCCTGTGAGGTGAGTCCTGTTATGGCCTCCACtctgcagatgaagaaac--aggct-------------------cagaggggTAACAGCACTT-CCCAGGAGGCGCGGCTGGTTTGGGGTGAAGCTGGAGTTACCCTGAGCACAGCCTGACTCCAGGAGTCAGCTCCACGGCCTCTTCCTCTGAGACACGGTTTTCTCATCGGCCAGTGGGGCTCT-GCCTGCTTCCTGAGGCTGTTA-GAGGCTGGCAGGCCAGGTCGACAGAGGAAAGGGACCCGT--CCTGTGCCTCAGAAGACACAGGCGAGGAGCAGGCATGCGGCCCCAGGGACCGTCTCTGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637986 352 + 50890351 gcccttttaaggaaggtcttgtctaaccctcccagtgcctgtgaggtgagtcctgttatggcctccactctgccgatgaagaaac--aggct-------------------cagaggtgtaacagcacttccccaggaggcgtggctggtttggggtgaagctggagttaccctgagcacagcctgactccaGGAGTCAGCTCCACGGCCTCTTCCTCTGAGACACGGTTTTCTCATCGGCCAGTGGGGCTCT-GCCTGCTTCCTGAGGCTGACA-GAGGTTGGCAGGCCAGGTCGACAGAGGAAAGGGACCCGT--CCTGTGCCTCAGAAGACACAGGCGAGGAGCAGGCATGAGGCCCCAGGGACCGTCTCTGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53980 328 + 138250 GCCCTTTTCAGGAAGGCCTCGT---------------------------------------------Ctctgcagatgaagaaag--aggctggtcggggggggggggggggggggaggttacaccatttccccaggagacacggctggtgtggggtgaagctggagctaacccgagcacagcctgactccaggagtcagttccacggcctcttcctctgAGACATGGTTTTCTCATCAGCCAGCAGCGCTCT-GCCTGCTTCCTGGGGCTGTTG-GAGGGTGGCAGGCCACATCAACACAGGAAAGGGACTCAACCTCTCTGCCTCGTATGATGCAGGGGAGGAGCAGGTATGAGGCCCCAGGGACCGTCTCTGAG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20129527 335 - 122678785 gccattttaagg-----cccatctcatcctcccagtaagtgtgaggagggcactaggatggccctc-ctgtgttgttaaggcaactaaggac-------------------ctaagtggtgaggctgcttccccaggtggcacagtttgtttggggtgaaggtggagtcgccccaagcaCAA-------CCAGGAAGCAGCTCCATAATCCCCTCCTCTGGGACTCAA-TTTCTTATCAAACAGCA----TCTAGCCTATTTCCTGGGGCTATTCTGAGGCCACTAGGCTGAAT--ACACATGTA---GACTCATGCTTGGCATCCCAGGAGATACAGGGGAGGGGGCAGAGCGAAGCCGCTCATGTAGTCTCTGAG i canFam3.chr1 C 0 I 519 a score=3600.000000 s hg38.chr19_GL949747v2_alt 692510 1 + 729520 G s panTro4.chr19 59959787 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56907155 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382589 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685539 1 + 64156825 G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55828252 1 + 59248254 G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47936402 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47638338 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 54308 1 + 138250 G i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20129862 519 - 122678785 I a score=4031525.000000 s hg38.chr19_GL949747v2_alt 692511 1253 + 729520 GAGGGTCCT-GGGCCCTGGGCTGAGAAAGCAGGGGTGGAGGGCTCCACGTGGAGACCCCAGGCTGGGAGGGGACTCACCGAGTGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCGGGGTGCAGGGCGTTGACAGTCACACCAGAGCCTGGGGAAGAAAGAAAGAGAAGACTGAGGG-AG------------GGGTCCA-GCCTCACCTGGGAGGCTGTGGCAGCCCACACCCAGCTGTGGGGC-TTCCGGGCACCAGGCTGCTTCCTGCACTCAAACCCCATCGTCCCTCTTGCTCTGGAATCTT-----------------------------------------AGTGAAGTGGTCTTATCTTGCGGAGCGGCTCTGCCACATGGCTGCTGGGAGCCGAGCTTT--------------------------cctggagggcttcataaacccagaacgctgagct---------------------------------------------------------------------tac-----------------ccc--gggagcctgcatcggtgcgtggcggtgggacctaagatactgtaactctgaccagctcccagtggggctggcaccgctggtccacagaccgtctttcagaagcaaagGCCTAGCACAGATTTCTCAAT-----------------------------------------------------------------------CTCAGCACTGTGGATGCTGTGGGTTGGGAGGAGTGAGGGGCCATCCCGTGCGCTGTAGGACATTGAG-AGCATCTGGGCCTTTACCCTCCAGATGCCCAGAGCAATCTCTCCCCAAGCC-----------AGCTGTGATCACTG-TGTTTCCAGGCATTGACAACTG----CGGGTCA---AAACTGCCCCTGGTTGAGACTCACT-GG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAACAGCAGCAGGGAAGGACATCTGATCCAGGCAGACTAGACCACCTGGGATGAACAGACAATCCTCAGAAGAACGATCGATTAGT--------------------GATGTCTGCTTCAGGCACCAGAAGCGGGCAGCGTGGTCCACATGCTCTACTTTTGCTGACTCTGTTCTGGATCCACCGTTTGGCCTCCCATCAGCCTAGGATCATGGAAAGGCCGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---CGAGCCTAGCGCCCCCGTACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCGAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTATACTTCCTCGTCTGCCAGTTCAAGTCGTCAAAGTCTATGTGCCCAGCAACATGGGCCAGGGACGAGAGGTTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTTGTCAAGAGAAAGTGACCTGGATTAAGGATGATGAAAA s panTro4.chr19 59959788 1357 + 63644993 GAGGGTCCT-GGGCCCTGGGCTGAGAAAGCAGGGGTGGAGGGCTCCGCGTGGAGACCCCAGGCTGGGAGGGGACTCACCGAGTGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCGGGGTGCAGGGCGTTGACAGTCACACCAGAGCCTGGGGAAGAAAGA----GAAGACTGAGGGGAG------------GGGTCCA-GCCTCACCTGGGAGGCTGTGGCAGCCCACACCCAGCTGTGGGGC-TTCCGGGCACCAGGCTGCTTCCTGCACTCAAACCCCATCGTCCCTCTTGCTCTGAAATCTT-----------------------------------------AGTGAAGTGGTCTTATCTTGCGGAGCAGCTCTGCCACATGGCTGCTGGGAGCCGAGCTTT--------------------------CCTGGAGGGCTTGATAAACCCAGAACGCTGAGTTCTGATAAACCACAGACAGGTTTTAAACCACCTGTCTGTGGCACTTTGTTACGGAACCCGAGCTGAGTGGTACAGGTAGGAAGGCACCCACCC--GGGAGCCTGCATCGGTGGGTGGCggtgggacctaagatactgtaactctgaccagctcccagtggggctggcaccgctggtccacagaccgtctttcagaagcaaagGCCTAGCACAgatttctcaat-----------------------------------------------------------------------ctcagcactatggatgctgtgggttgggaggagtgaggggccatcccgtgtgctgtaggacattgagcagcatctgggcctttaccctccagatgcccagagcaatctctccccaaccc-----------agctgtgatcactg-tgtttccaggcattgacaactg----cgggtca---aaactgcccctggttgagactcact-gG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAACAGCAGCAGGGAAGGACATCTGATCCAGGCAGACTAGACCACCTGGGATGAACAGACAATCCTCAGAAGAACGATCGATTAGTATCAGTTAGTATCGATTAGTGATGTCTGCTTCAGGCACCAGAAGCGGGCAGCGTGGTCCACATGCTCTACTTTTGCTGACTCTGTTCTGGATCCACCGTTTGGCCTCCCATCAGCCTAGGATCATGGAAAGGCCGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---CGAGCCTAGTGTCCCCGTACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTATACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCAACATGGGCCAAGGACGAGAGGTTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTTGTCAAGAGAAAGTGACCTGGATTAAGGATGATGAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56907156 1227 + 60714840 GAGGGTCCT-GGGCCCTGGGCTGAGAAAGCAGGGGTGGAGGACTCAGCATGGAGACCCCAGGCTGGGAGGGGACTCACCGAGTGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCGGGGTGCAGGGCATTGACAGTCACACCAGAACCTGGGGAAGGAAGA----GAAGACTGAGGG-AG------------GGGTCCA-GCCTCACCTGGGAG--------------------GCTGTGGGGC-TTCCGGGCGCCAGGCTGCTTCCTGCACTCAAACCCCATCGTCCCTCTTGCTCTGAAATCTT-----------------------------------------AGTGAAGTGGTCTTATCTTGCAGGGCAGCTCTGCCACATGGCTGCTGGGAGCCGAGCTTT--------------------------cctggagcgcttgataaacccagaacgctgagct---------------------------------------------------------------------tac-----------------ccc--gggagcctgcatcggtgggtggcggcaggatctgagatactgtaactctgaccagctcccagtggggctggcaccgctggtccacagaccgtctttcagaagcaAAGGCCCAGCACAgatttctcgac-----------------------------------------------------------------------ctcagcactatggacgctgtggggtgggaggagtgaggggcagtcctgtgtgctgtaggacattgagcagcatccgggcctttaccctccagatgcccagagcaatctctccccaaccc-----------agctgtgatcactg-tgtttccaggcattgacaactg----cgggtca---aaactgcccctggttgagactcact-gG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAACAGCAGCAGGGAAGGACATCTGATCCAGGCAGACTAAACCACCTGGGATGAACAGACAATCATC---AGAACgatcgattagt--------------------gatgtctgctgtaggcaccagaagcaggcagcgtggtccacatgctctacttttgccaactctgTTCTGGATCCACTGCTTGGCCTCCCATCAGCCTAGGATCATGGAAAGGCCACTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---CGAGCCTAGCGCCCCCATACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTATACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCAACATGGGCCAAGGACGAGAGGTTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTTCAGCAGCAAGTTTGTCAAGAGAAAGTGACCTGGATTAAGGATGACGAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382590 1249 - 106955855 GAGGGTCCTGGGGCCCTGGGCTGAGAAAGCAGGGGTGGAGGGCACAGCATGGAGA-CCCAGGCTGGGAGGGGACTCACCAAGTGTGGAGCTGGAGAAGGTGGAGCCATGGATGCCTGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCGGGGTGCAGAGCATTGACAGTCACACCAGAACCTGGGGAAGAAAGA----GAAGACTGAGGG-AG------------GGGCCCA-GCCTCACCTGGAAGGCTGTGGCGGCCCACACCCAGCTGTGGGGCTTTCCCGGCACCAGGCTGCTTCCTGAACTCAAACCCCATCGTCCCTCTTGCTCTGAAATCTC-----------------------------------------AGTGAAGTGGTCTTATCTTGCAGGGTGGCTCTGCCACATGGCTGCTGGGAGCCGAGCTTT--------------------------cctggagggcttgataaacccagaacgctgagct---------------------------------------------------------------------tac-----------------ccc--gggagcctgcatcggtgggtggcagtgggatctgacatactgtaactctgaccagctcccagtgcggctggcaccgctggtccacagaccgtctttcagaagcaAGGGCCCAGCACAGACttctcaac-----------------------------------------------------------------------ctcagcactatggacactgtgggctgggaggagtgaggggcagtcctgtgtgctgtaggacgttgaacagcatccgtgcctttaccctccagatgcccagagcaatctctccccaaccc-----------agctgtgatcactg-tgtttccaggcattgacaactg----caagtca---aaactgcccctggttgagactcactgGG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAACAGCAGCAGGGAAGGACATCTGATCCAGGCAGATTAGACCACCTGGGATGAACAGACAATCATC---AGAACgatcgattagc--------------------gatgtctgctccaggcaccagaagggggcagcgtggtccacatgctgtactttcgccaACTGTGTTCTGGATCCGCTGTTTGGCCTCCCATCAGCCTGGGATCATGGAAAGGCCGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---CGAGCCTAGCGCCCCCGTACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTGTACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCAACATGGGCCAAGGACGAGAGGTTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTAGTCAAGAGAAAGTGACCTGGATTAAGGATGACGTAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685540 1289 + 64156825 GAGGGTCCG-GGGCCCCGGGCTGAGAAAGCAAGGGTGGAGGGCTCAGCGTGCAGACCCCAGGCTGGGA-GGGACTCACCGAGCATGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCAGGGTGCAGGGCGTTGACAGTCACACCAGAGCCTGGGGAAGAAATA----GAAGACTGAGGG-AG------------AGGTCCA-GCCTCACCTGGAAGGCTGTGGCAGCCCACACCCAGCTGTGGGGC-TTCCGGGCGCCAGGCTGCTTCCTACACTCAAACCCCATCGTCCCTCTTGCTCTGAAATCTTAGTGGTCTTATCTTGCATCGTCCCTCTTGCTCTGAAATCTTAGTGAAGTGGTCTTATCTTGCAGGGCGGCTCTGCCACATGGCTGCTGGGAGCCGAGCTGT--------------------------cctggagggcttgataaacccagaacgctgagct---------------------------------------------------------------------cac-----------------ccc--aggaatccaaatcggtgggtgatggtgggatctgagatactgtaactctgaccagctcccactggggctggcaccgctggtccacagacggtctttcagaagcaAAGGCCCAGCACAgattcctcaac-----------------------------------------------------------------------ctcagcactatggacactgtggatcgggaggagtgaggggccgtcctgtgtgctgtaggaccttgagcagcatccgggcctttacactccagatgcccagagcaatctctcccccaccc-----------agatgtgatcactg-tgtttccaggcattgacaactg----tgggcca---gaactgcccctggttgagactcact-gG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAGCAGCAGCAGGGAAGGACACCTGATCCAGGCAGACTAGACCACCTGGGATGAACAGACAATCAGCAGAAGAACAATCGATTAGT--------------------GATGTCTGCTTCAGGCACCAGAAGCGGGCAGGGTGGTCTGTGTGCTCTACTTTTGCAGATTCTGTTGTGGAGCCACAGCCTGGCCTCCCATCAGCCTAGCATCATGGAAGGGCTGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---TGAGCCTAGCG-CCCCATACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTATACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCCACGTGGGCCAAGGACGAGAGGTTGATGATCCGTGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTCGTCAAGAGAAAGTGACCTGGATTAAGGATGACAAAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55828253 1243 + 59248254 GAGGGTCCG-GGGCCCCGGGCTGAGAAAGCAAGGGTGGAGGGCTCAGCGTGCAGACCCCAGGCTGGGA-GGGACTCACCGAGCGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCGGGGTGCAGGGCGTTGACAGTCACACCAGAGCCTGGGGAAGAAATA----GAAGACTGAGGG-AG------------AGGTCCA-GCCTCACCTGGAAGGCTGTGGCAGCCCACACCCAGCTGTGGGGC-TTCCGGGCGCCAGGCTGCTTCCTACACTCAAACCCCATCGTCCCTCTTGCTCTGAAATCTT----------------------------------------------AGTGGTCTTATCTTGCAGGGCGGCTCTGCCACATGGCTGCTGGGAGCCGAGCTGT--------------------------cctggagggcttgataaacccagaacgctgagct---------------------------------------------------------------------cac-----------------ccc--aggaattcaaatcagtgggtgagggtgggatctgagatactgtaactctgaccagctcccactggggctggcaccgctggtccacagaccgtctttcagaagcaAAGGCCCAGCACAgattcctcaac-----------------------------------------------------------------------ctcagcactatggacgctgtggatcgggaggagtgaggggccgtcctgtgtgctgtaggaccttgagcagcatccgggcctttacactccagatgcccagagcaatctctcccccaccc-----------agatgtgatcactg-tgtttccaggcattgacaactg----tgggcca---gaactgcccctggttgagactcact-gG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAGCAGCAGCAGGGAAGGACACCTGATCCAGGCAGACTAGACCACCTGGGATGAACAGACAATCAGCAGAAGAACAATCGATTAGT--------------------GATGTCTGCTTCAGGCACCAGAAGGGGGCAGGGTGGTCCGTGTGCTCTACTTTTGCGGATTCTGTTGTGGAGCCACAGCTTGGCCTCCCATCAGCCTAGGATCATGGAAGGGCTGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---CGAGCCTAGTG-CCCCGTACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTATACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCCACGTGGGCCAAGGACGAGAGGCTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTCGTCAAGAGAAAGTGACCTGGATTAAGGATGACAAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47936403 1247 + 51301725 GAGGGTCCT-GGGCCCCGGGCTGAGAAAGCAGGGGTGGAGGGCTCAGCGTGCAGACCCCAGGCTGGGA-GGGACTCACCGAGCGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCGGGGTGCAGGGCGTTGACAGTCACACCAGAGcctggggaagaaaga----gaagactgagGG-AG------------AGGTCCA-GCCTCACCTGGAAGGCTGTGGCAGCCCACACCCAGCTGTGGGGC-TTCCGGGCGCCAGGCTGCTTCCTACACTCAAACCCCGTCGTTCCTCTTGCTCTGAAATCTT-----------------------------------------AGTGAAGTGGTCTTATCTTGCA-GGCGGCTCTGCCACATGGCTGCTGGGAGCCGAGCTGT--------------------------CCTGGAGCACTTGATAAACCCAGAACGCTGAGCT---------------------------------------------------------------------CAC-----------------CCC--AGGAATCCAAATCGGTGGGTGACGGTGGGATCTGAGATACTGTAACTCTGACCAGCTCCCACTGGGGCTGGCACCGCTGGTCCACAGACGGTCTTTCAGAAGCAAAGGCCCAGCACAGATtcctcaac-----------------------------------------------------------------------ctcagcactatggACGCTGTGGATCGGGAGGAGTGAGGGGCCGTCCTGTGTGCTGTAGGACCTGGAGCAGCATCCGGGCCTTTACACTCCAGATGCCCAGAGCAATCTCTCCCCCACCC-----------AGATGTGATCACTG-TGTTTCCAGGCATTGACAACTG----TGGGCCA---GAACTGCCCCTGGTTGAGACTCACT-GG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAGCAGCAGCAGGGAAGGACACCTGATCCAGGCAGACTAGACCACCTGGGATGAACAGACAATCAGCAGAAGAACAATCGATTAGT--------------------GATGTCTGCTTCAGGCACCAGAAGGGGGCAGGGTGGTCCGTGTGCTCTACTTTTGCGGATTCTGTTGTGGAGCCACAGCTTGGCCTCCCATCAGCCTAGGATCATGGAAGGGCTGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---TGAGCCTAGCG-CCCCATACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTCATACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCAACATGGGCCAAGGACGAAAGGTTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTCGTCAAGAGAAAGTGACCTGGATTAAGGATGACAAAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47638339 1248 + 50890351 GAGGGTCTG-GGGCCCTGGGCTGAGAAAGCAGGGGTGGAGGGCTCAGCGTGCAGACCCCAGGCTGGGAGGGGACTCACCGAGCGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACACCGGGGTGCAGGGCGTTGACAGTCACACCAGAGCCTGGGGAAGAAAGA----GAAGACGGAGGG-AG------------AGGTCCA-GCCTCCCCTGGAAGGCTGTGGCAGCCCACACCCAGCTGTGGGGC-TTCCGGGCGCCAGGCTGCTTCCTACACTCAAACCCCGTCGTGCCTCTTGCTCTGAAATCTT-----------------------------------------AGTGAAGTGGTCTTATCTTGCA-GGCGGCTCTGCCACATGGCTGCTGGGAGCCGAGCTGT--------------------------cctagagcgcttgataaacccagaacgctgagct---------------------------------------------------------------------cac-----------------ccc--aggagtccgaatcagtgggtgagggtgggatctgagatactgtaactctgaccagctcccactggggctggcaccgctggtccacagaccgtctttcagaagcaAAGGCCCAGCACAgattcctcaac-----------------------------------------------------------------------ctcagcactatggacgctgtggatcgggaggagtgaggggccgtcctgtgtgctgtaggacactgagcagcatctgggcctttaccctccagatgcccagagcaatctctcccccaccc-----------agctgtgatcactg-tgtttccaggcattgacaactg----tgggcca---gaactgcccctggttgggactcact-gG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAACAGCAGCAGGGAAGGACACCTGATCCAGGCAGACTAGACCACCTGGGATGAAGAGACAATCATCAGAAGAACAatcgattagt--------------------gatgtctgcttcgggcaccagaagggggcagggtggtccgtgtgctctacttttgcAGATTCTGTTGTGGAGCCACAGCTTGGCCTCCCATCAGCCCAGGATCATGGAAGGGCTGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---CGAGCCTAGCG-CCCCGCACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTATACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCAACATGGGCCAAGGACGAGAGGTTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTCGTCAGGAGAAAGTGACCTGGATTAAGGATGACAAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 54309 1251 + 138250 GAGGGTCCT-GGGCCCTG--------------GGGTGGAGGGCTCAGTGCAGAGACCCCAGGCTGGGAGGGGACTCACCGAGCGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACACCGGGGTGCAGGGCATTGACAGTCACGCCAGAGCCTGGGGAA-AAAGA----GAAGACTGAGGG-AG------------GGGT-----CCTTACCTGGAAGGCTGTGGCAGCCCACACTCAGCTCTGGGGC-------------------TTCCTATAGTCAAACCCCATCGTCGCTCTTGCGCTGAAATCTT-----------------------------------------AGTAAGGTGGTCTTATCTTGCAGAGCAGCTCTGCCACGTGGCGCCTGGGGGcagagattt--------------------------cctggagggcttgatagacccagaacaccaggct---------------------------------------------------------------------ca------------------ccc--aggagtctgaatcagtgggtggggctgggatctga--------------gaccagctcccagtggggttggcactgctggtccacagaccatctttcagaGGCAAGGGCCCAGGGCAGATTTCTCAGCGGACGCTGCGGGCTTTGAGGCACTGCTGGTCCACAGACCATCTTTCAGAGGCAAGGGCCCAGGGCAGATTTCTCAGC-----GGATGCTGCGGGCTTTGAGGGgtgaggggctgtcctgtgtgctgcaggacactgaacagcatgtgggcctttaccctccagatgcccagagcaatctctccccgaccc-----------agctgtggttactg-tgcctccaggta-tgacaattc----caggcca---gaagtgctcctggctgagactcact-gG-CTGGAGC-CAGAAGGCTGGGCTGCCTACCGAAT----GCAGGGAAGGACA-CTGATCCAGGCAGACTAGGCCACCTGGAATGAATGAACAATCATCAGAACAACGATCGATTAGT--------------------TACGTCTGCTTCAGGCACCAGAAGCAGGCAGGGTGGTCCCTATGCTCTGTTTTAGCCCACTCTGTTCTAGAGCCACAGCCTGGCCTCCGCCCAGCCCAGGATCACCGAAGGGCTGCTCTGGGCTCAAAG-TA----AAGAGGGAGGC---CGAGCCTAGCG-CCCCATACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGACGGCCAGCTTGCTCTGGCTGTAGGCGGCTTTGGGGTCATACTTCCTCGTCTGCCAGTTCAGGTCATCAAAGTCTATGTGCCCAGCAATGTGGGCCAAGGACGAGAGGTTGATGATCCGGGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTTGTCAAGAGAAAGTGGCCTGGGTTAAAG--GGTGACAA i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20130381 1223 - 122678785 GAGAGTCCT-AGGCCCTGAGCTGAGAGGGCAGGGG-------CTCCGCTAAGGGACCCCAGGCCAGGAGGGTTCTTACCGAGTGTGAAACTGGAGAAGGCAGAGCTGTGCATGCCTGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCAGGGTGCAGTGCATTGACAGTCACGCCTGTGCCTAGGGAGAGAAGA---GGAGGGATGAGGG-AGTGGGCAAACGTCAGGTTCACACCCCACCTGGAAAGCTGACGTTGCCCATTCTCAGCTCTAGGGC-TACCCAGTACTGTGCCATGTCCTACCTTTGAACCCACAGCACCCTCTTGCTCTGAAACTTC---------------------------------------CACATTGAGGGGTTTCATCTTGCATTGCAGCTCTGTTGCATGACTGCCCAGAGcagagcctcccaaacctgagcgtatgtaaaaatcacccggagcacttgagacacccaaaccgctaggtt--------------------------ccacc--------------------------------------cac-----------------ccccagggaatctgaagcagtgggtcggggtggggtctgagatgttgcagtggtgacaagctcccagcccagctgacattgcgggtccacggatgctctctgaggagcaggg---CAAAGGGTACCTTTCAAC-----------------------------------------------------------------------TCCAGCTCTGTGCACACTGAGGTC-------------AGATCATTCTTGATCCTG-------CTGAGCAG------------------ctagctgccagtagcaacacccaccccacctccactccctgaagcgaggaccacaactatcttcagatactgccaaatgtccctggggcatccacatcacccatggttgagaatcact-AGCCTAGAGCACCAATGACTTAGATGCCTGTGTGGGATGAGCAGGGAAGGATGCC--------------------------------------------------ACGACTGATGAGT--------------------GATGTCTGCTTCAGGCACC---ACCGAACATGGTGGTATGTGTTTCACACATCCACCTGCTCTGTTCTGGGACTGATGCTTGACCTTCCATCGGTCCAGGGTCATAGCAGGACTGTCCCAGGCTCAGAGCTAGAGGAAGAGGAAGGCCAGCGAGGCTCACACACACATACCCTGCAGCCGCCGGCTCAGCTCCTTGGTAAAGAGGATGACGGCCAGCTTACTCTGGCAATAAGCCGCTTTGGTGTCATACTTCCTCTTCTCCCAGTTCAAGTCATCAAAGTCTATGTGTCCTGCAACGTGGGCCAAGGACGAGAGATTGATGATCCGTGAAGGGGCTGAGGCTTTCAATTTGTCCAGCAGCAAGTTTGTCAAGAGAAAGTGACCTGGGTGAAGGACAACAAAAA i canFam3.chr1 I 519 I 831 a score=247827.000000 s hg38.chr19_GL949747v2_alt 693764 88 + 729520 GGTCACTTT-------------tgactcacacctaaaatcccagcactttgggaggacgacgggggaggatcgcttgaacccaTGGTGCAGCC-CCTGCCCA s panTro4.chr19 59961145 88 + 63644993 GCTCACTTT-------------tgactcacacctaaaatcccagcactttgggaggatgacgggggaggattgcttgaacccaCGGTGCAGTC-CCTGCCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56908383 88 + 60714840 GATCACTTT-------------tggctcacacctaaaatcccagcactttgggaggatgacgggggaggatcgcttgaacccaCGGTGCGGCC-CCTGCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103383839 88 - 106955855 GGTCACTTT-------------tggctcacgcctaaaatcccagcactttgggaggacgacaggggaggatcgcttgaacccaCGGTGCAGCC-CCTGCCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60686829 89 + 64156825 GGTCACTTT-------------tggctcacgtctaaaatcccagcactttgggaggacgacgggggaggatcgcttgagcccaCGGGGCAGCCCCCTGCCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55829496 89 + 59248254 GGTCACTTT-------------tggctcacgcctaaaattccagcactttgggaggacgacgggggaggatcgcttgagcccacggggcagCCCCCTGCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47937650 89 + 51301725 GGTCACTTT-------------tggctcacgcctaaaatcccagcactttgggaggacgacgggggaggatcgcttgagcccacggGGCAGCCGCCTGCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47639587 89 + 50890351 GGTCACTTC-------------tggctcacgcctaaaatcccagcactttggggggacgacaggggaggatcgcttgagcccacggggcagCCCCCTGCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 55560 95 + 138250 GGTCACTTTTggtcgggcacggtggcttacgcctgtaatcccagcacttcgggag-------ggggaggatggcttgagCCCACGGTGTGGCCCCCTGCCCA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20131604 831 - 122678785 I a score=623176.000000 s hg38.chr19_GL949747v2_alt 693852 171 + 729520 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCGAAGCCGTCCTCGGTGGTCCAGTGGGGGCACCGCATCACACCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAA---------GAGAGGGGTGGAGGAGGAGACATCCCGGTGAGGACAGACCCCAGCCTGATGC s panTro4.chr19 59961233 171 + 63644993 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCGAAGCCGTCCTCGGTGGTCCAGTGGGGGCACCGCATCACACCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAA---------GAGAGGGGTGGAGGAGGAGACATCCCGGTGAGGACAGACCCCAGCCTGAGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56908471 171 + 60714840 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCGAAGCCGTCCTCGGTGATCCAGTGGGGACACCGCATCACACCTGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAA---------GAGAGGGGTGGGGAAGGAGACATCAGGGTGAGGACAGACCCCAGCCTGAGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103383927 171 - 106955855 GGCCTCACCCAGGTAGTTAACGCCAAACTGCATCTCGAAGCCGTCCTCGGTGGTCCAGTGGGGGCATCGCATGACGCCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAA---------GAGGGGGGTGGGGAAGGAGACATCAGGGTGAGGACAGACCCCAGCCCGAGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60686918 180 + 64156825 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCAAAGCCGTCCTCAGTGGTCCAGTGGGGGCACCGCATCACGCCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAAgggggggggggggggggggggggaggAGACATCAGGGAGAGGACAGACCGCAGCCTGAGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55829585 171 + 59248254 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCAAAGCCGTCCTCAGTGGTCCAGTGGGGGCACCGCATCACGCCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAA---------GGGAGGGGTGGGGAAGGAGACATCAGGGTGAGGACAGACCCCAGCCTGAGGC i macFas5.chr19 C 0 I 16 s papAnu2.chr19 47937739 171 + 51301725 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCGAAGCCGTCCTCGGTGGTCCAGTGGGGGCACCGCATCACGCCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTggaa---------gggaggggtggggaaggagaCATCAGGGAGAGGACAGACCCCAGCCCGAGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47639676 171 + 50890351 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCGAAGCCGTCCTCGGTGGTCCAGTGGGGGCACCGCATCACGCCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAA---------GAGAGGGGTGGGGAAGGAGACGTCAGGGAGAGGACAGACCCCAGCCTGAGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 55655 169 + 138250 GGACTCACCCAGGTGGTTAACGCCAAACTGCATCTCAAAGCCGTCCTCCGTGGTCCAGTGGGGGCACCGCATCACGGCCGCGTTGTTGACTAGAATGTCCACTCGCTCCTCCTCTAGAA-----------GACGGGTGGGGAAGGAGACCTCAGGGTGAGGACAGACCCCGGCCTGAGGC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20132435 164 - 122678785 GGCCTCACCCAAGTGGTTAACACCAAACTGCATCTCAAAGCCGTCCTTGGTGGTCCAGTGGGGGCACCGCATCACGGCCGCGTTGTTGACCAGGATATGAACTTGCTCCTCCTCTAGGA---------GACAGGGGTGAGGGCAGGTATGTCA-------GTCGCATGCCTGCCTGGAGC i canFam3.chr1 I 831 C 0 a score=224514.000000 s hg38.chr19_GL949747v2_alt 694023 126 + 729520 ACCAGCA------------------------------------------GAAACACTCCTGTGctcccacaacctgtgaatgtggcctg-tgccggaaacagggtctgtgc-cgaagtggccatgtcaggatgcggtcattagggtgagccctaatccaatgactggtgt s panTro4.chr19 59961404 126 + 63644993 ACCAGCA------------------------------------------GAAACACTCCTGTGctcccacaacccgtgaatgtggcctg-tgccggaaacagggtctgtgc-cgaagtggccatgtcaggatgcggtcattagggtgagccctaatccaatgactggtgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56908642 126 + 60714840 GCCCGCA------------------------------------------CAAACACTCCTGTGctcccagaacccatgaacgtggcctg-tgccagaaacagggtctgtgc-cgaagtggccacatcaggatgaggtcattagggtgagccctaatccaatgactggtgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103384098 124 - 106955855 ACCAGCA------------------------------------------GAAACACTCCTGTactcccaga--ccgtgaacgtggcctg-tgccggaaacagggtctgtgc-agaagtggccacgtcaggatgaggtcattagggcgagccctaatccagtgactggtgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60687098 107 + 64156825 AGCAGTA------------------------------------------GAAACGTTCCTGTGCTCCCAGAACCCGTGAACATGGCCT-------------------GTGC-TGAAGTGGCCACgtcaggaagaggtcattagggtgagccc-aatccagtgactggtgt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47937910 125 + 51301725 AGCAGTA------------------------------------------GAAACGTTCCTGTACTCCCAGAACCCGTGAACATGGCCTG-TGCCGGAAACAGGGTCCGTGC-TGAAGTGGCCACGTCAGGAAGAGGTCATTAGGGTGAGCCC-AATccagtgactggtgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47639847 126 + 50890351 AGCAGTA------------------------------------------GAAACGTTCCTGTGctcccggaacccgtgaacatggcctg-cgccggaaacagggtctgtgc-caaagtggccacgtcaggaagaggtcattagggtgagccctgatccagtgactggtgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 55824 100 + 138250 -ACAGTA------------------------------------------GAAACGTT---------CCGGAGCCCGTGAAGGTGGCCCC-TGCTGGAAACAGG--CTGTGC-AGAAGCGGCCA--------------cattagggtgaggcctaatccaatgactggtgt i calJac3.chr22_GL285922_random C 0 I 286 s canFam3.chr1 20132599 156 - 122678785 ACCAGCGCAATTGGTGTAAAACAACCCCTGCACTGAGCTGAACTGTCCTAAAACATTCAGGCCCAcccagagcctgggaatgcaacctgtttttggaaacag--tccttgcaaaaagtaaagaagttaagataaggtca-cagcgtaggccctaatgca----------- i canFam3.chr1 C 0 C 0 e macFas5.chr19 55829756 16 + 59248254 I a score=405565.000000 s hg38.chr19_GL949747v2_alt 694149 201 + 729520 ccttataggaagggaaaacagagacagagacacatggggaga---aggcc---atgtgtggacagaggcaaagaccggagaggcacagctccaaggtgagggtgggccgcccccgctggaag-tggaagaggctgggaggattatggcccgtctcacagg-tcacagccacagggacaccgcgat-tcagactgccggcttccggaaccg s panTro4.chr19 59961530 200 + 63644993 ccttataggaagggaaaacagagacagagacacatggggaga---aggcc---atgtgtggacggaggcaaagaccggagaggcacagctccaaggtgagggtggg-cgcccctgctggaag-tggaagaggctgggaggattatggcccgtctcacagg-tcacagccacagggacaccgtgat-tcagactgccggcttccggaaccg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56908768 199 + 60714840 ccttatatgaaggg-aaacagagacagagacacatggggaga---aggcc---atgcgtggatggaggcagagaccagagaggcacagctccaaggtgagggtgcg-cacccccgctggaag-tggaagaggctgggaggattatggcccgtctcacagg-tcacagccacagggacaccatgat-tcagactgccggcttccggaaccg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103384222 200 - 106955855 ccttataggaagggaaaacagagacagagacacatggggaga---aggcc---acgtgtgaacggaggcggagaccggagaggcgcagctccaaggtgagggtggg-cacccccactggaag-tggaagaggctgggaggattacggcccgtctcacagg-tcacagccacagggacaccgtgat-tgagactgccggcttccggaaccg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60687205 201 + 64156825 ccttataggaagggaaaacagagacagagacacacggggaga---aggcc---acatgtggacggaagcggagaccggagaggcgcagctccgagatgagtgtggg-cgcccccgctggaag-tggaagaggctgggaggattaccgcccgtctcacaggatcacagccacagggacaccgtgat-tcggactgccggcttccggacccg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47938035 201 + 51301725 ccttataggaagggaaaacagagacagagacacacagggaga---aggcc---acATGTGGACGGAAGCGGAGACCGGAGAGGCGCAGCTCCAAGATGAGTGTGGG-CGCCCCCGCTGGAAG-TGAAAGAGGCTGGGAGGATTACCGCCCGTCTCACAGGATCACAGCCACAGGGACACCGTGAT-TCAGGCTGCCGGTTTCCGGACCCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47639973 201 + 50890351 ccttataggaagggaaaacagagacagagacacacggggaga---aggcc---acgtgtggacggaagcggagaccggagaggcgcagctccgagatgagtgtggg-cgcccccgctggaag-tggaaaaggctgggaggattaccgcccgtctcacaggatcacagccacagggacgccgtgat-tcggattgccggcttccggacccg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 56210 150 + 138250 CCTTACAGGAAGGGAAAACAG----------------------------------------ACGGAGACACGGACAAGAGAG-----------------GTGTGGG-CGACTGCACTGGAAG-TGGAGGAGGCTGGGAGGAttacagcccggctcacaggaacacagccccagagacacccagat-tccaactgctggcttccagaacgg i calJac3.chr22_GL285922_random I 286 C 0 s canFam3.chr1 20132755 163 - 122678785 ------------gcaggacagggactgaggaccatggggaaacagaggccatgatgtatcgat-gagccaaggatcactgaggaccaac------------------agccactgccagaagctgaaagaagcagaaaggatctc-----------ctgg-tcccttcct----gagactgtgatctcagacttctggcctccaaaactg i canFam3.chr1 C 0 I 2038 e macFas5.chr19 55829756 16 + 59248254 I a score=1119423.000000 s hg38.chr19_GL949747v2_alt 694350 570 + 729520 tgagggaatgcacgtctgagggtgt-aagccactgggtttgcagtacattgttacagcagctccaggacactcacacGCCCTCCGCACCTCCATCTAAGCCTTGGGACTCCTTCCTGCCGGAGCCCCGAGGCCAAAAACGGGAGGTTACCGGTGGGAGCCCCGGCAC--------CGCAGGC---G-TGGTTTCATTCCCAAACCTGCCACCTCACTCATACAAGCAACCAAAGGACACAC-AGATGGAGACTGCAgcctcagtttcctcagctgtaaaatgcgctgaaccacagggccttcctcCCtgtaccactcagctcgggttccgtaacaa------agtgccacagacaggtggtttaaaacctcacagacctggccgggcacagtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcagatcacctgaggtcaggagtttgagaccagcctggccaacatggagaaaccgcgtctttactaaaaatacaaaattagccaggcgtggtggcatgcacctgtaatcccagctactcaggaggctgaggcgggaaaatcgcttgaaaccaggag s panTro4.chr19 59961730 570 + 63644993 tgagggaatgcacgtctgagagtgt-aagccactgggtttgcagtacgttgttacagcggccccaggacactcacacGCCCTCCGCACCTCCATCTAAGCCTTGGGACTCCTTCCTGCCGGAGCCCCGAGGCCAAAAACAGGGGGTTACCGGTGGGAGCCCCGGCAC--------CGCAGGC---G-TGGTTTCATTCCCAAACCTGCCACCTCACTCACACAAGCAACCAAAGGACACAC-AGATGGAGACTGCAgcctcagtttcctcagctgtaaaatgcgctgaaccacagggccttcctcCCtgtaccactcagctcgggttccgtaacaa------agtgccacagacaggtggtttaaaacctcacagacctggccgggcacagtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcagatcacctgaggtcaggagtttgagaccagcctggccaacatggagaaaccgcgtctttactaaaaatacaaaattagccaggcgtggtggcatgcacctgtaatcccagctactcaggaggctgaggcaggaaaatcgcttgaaaccaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56908967 573 + 60714840 tgaggaaaggcatgtctgagggtgt-aagccactgggtttgcagtacattgttacagcagccccaggacactcacgcaCCCTCCGCACCTCCATCTAAGCCTTGGGACTCTTTCCTACAGGAGCCCCGAGGCCAAAAATGGGGGGTTACCGGTGGGAGCCCCGGCACCACAGGCTCGCAGGT---G-TGGTTTCATTCCCAAACCTGCCATCTCAC----ACAAGCAACCAAAGGACACAC-AGATGGCGACTGCagcctcagttgcctcagctgtaaaatgtgctgaaccacagggccttcttcCCtgtaccactcagctcgggttccataacaa------agtgccacagacaggcggtttaaaacctcacagacctcgccgggcacggtggctcacgcctgtaatcccagcacattgagaggccgaggtgggcggatcacctgaggtcaggagtttgagaccagcctggccaacatggagaaactgcgtctttactaaaaatacaaaattagccaggcgtggtggcgtgcacctgtaattccagctactcaggaggctgaggcgggagaatcgctt-aaaccaggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103384422 571 - 106955855 tgagggaatgcatgtctgagggtgt-aagccactgggtttgcggtacattgttacagcagccccaggacactcacacGCCCTCCGCACCTCCATCTAAGCCTTGGGACTCTTTCCTGCAGGAGCCCCGAGGCCAAAAACGGGGGGTTACCTGTGGGAGCCCCGGCACCGCAGGCTCGCAGGT---G-TGGTTTCATTCCCAAACCTGCCACCTCAC----ACAAGCAACCAAAGGACACAC-AGATGGAGACTGCagcctcagtttcctcagctgtaaaatgcactgaaccacagggccttcctcCCtgtaccactcggctcaggttccataacaa------agtgccacagacaggtggtttaaaacctcacggacctggcccggcacagtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcggatcacct---gtcaggagttcaagacaagcctggcaaacatggagaaaccgcgtctttactaaaaatacaaaattagccaggcatggtggcgtgcacctgtaattccagctactcaggaggccgaggcgggagaatagcttgaaaccaggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60687406 571 + 64156825 tgagggaatgcatgtctgagggtgtaaagccactgggtttgaggtacctcgttacagcaggtccaggacactcacac--------CCCCTCCACCTAAGCCTTGGGACTCTTTCCTGCAGGAGCCCCAAGGCCAAAC----GGGGTTACCGGTGCGAGCCCTGGCACTGCAGGTTTGCAGGTGCGG-CGGTTTCATTCCGAAGCCTGCCACCTCACTCGCACAGACAACCAGAGGGCACACAAGATGGAGACTGCagcctcagtttcctcagctgtaaaatgcgctgaaccacagggccttcctcCCtgtatcgctcggctcaggttccataacaa------agtgccacagacaggtggtttaaaacctcacagacctggccgggcgtggtggctcacgtctgtaatcccagcactttgggagaccgaggtgagcggatcacctgaggtcaggagtttgagactagcctgacccacatgaagaaatggcgtctctactaaaaatacaaaattagccaggcgtggtggtgggcacctgtaatgccagctactcaggaggctgaggcaagagaatcgcttgaaaccgggag i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47938236 567 + 51301725 TGAGGGAATGCATGTCTGAGGGTGTAAAGCCACTGGGTTTGAGGTACCTCGTTACAGCAGGCCCAGGACACTCACAC--------CCTCTCCTTCTAAGCCTTGGGACTCTTTCCTGCAGGAGCCCTGAGGCCAAAC----AGGGTTACCGGTGCGAGCACTGGCACCGCAGGTTTGCAGGT---G-CGGTTTCATTCCGAAGCCTGCCACCTCACTCACACAGACAACCAAAGGGCACAC-AGATGGAGactgcagcctcagtttcctcagctgtaaaatgcgCTGAACCATAGGGCCTTCCTCCCTATATCGCTCGGCTCAGGTtccataacaa------agtgccacagacAGGTGGTTTAAAACCTCACagacctggccgggcgcagtggctcacgtctgtaatcccagcactttgggagaccgaggtaagcggatcacctgaggtcaggagtttgagactagcctgacccacatgaagaaacggcgtctctactaaaaatacaaaattagccaggcgtggtggcgggcacctgtaatgccagctactcaggaggctgaggcaaaagaatcgcttgaaaccgggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47640174 566 + 50890351 tgagggaatgcatgtctgagggtgt-aagccactgggtttgaggcacctcgttacagcaggcccaggacactCACGC--------CCCCTCCTTCTAAGCCTTGGGACTCTTTCCTGCAGGAGCCCCGAGGCCAAAC----GGGGTTACCGGTGCGAGCCCCGGCACTGCAGGTTTGCAGGT---G-CGGTTTCATTCCCAAGCCTGCCCCCTCACTCGCACAGACAAGCAAAGGGCACAC-AGATGGAGACTGCagcctcagtttcctcagctgtaaaatgcactgaaccacagggccttcctcCCTATATCGCTCGGctcgggttccataacaa------agtgccacagacgggtggtttaaaacctcacagacctggccgggtgcggtggctcacgtctgtaatcccagcactttgggaggccgaagtgagcggatcacctgaggtcaggagtttgagaccagcctgaccaacatggagaaactgcgtctctactaaaaatacaaaattagccgggcgtggtggcgggcacctgtaatgccagctactcaggaggctgaggcaggagaatcgcttgaaaccgggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 56360 471 + 138250 tgagggaatgcgcttccgagggtgg-aagcccctgggtttgcggtacacggttacagcagccccaggacacacacacaCCCTGCACACCTCCATGGAAGCCCTGGGACTCTTTCCTGCAGG----------------------------------------------------TTCTCAGGC---GCTGGTTTCATTCCCAAACCTGCCACCTCACTCGCACAAGCAACCACAGGGCACAC-AGACGG-------AGCCTCAGTTTCCACAGC-----------------------ACCTTCCTCCCTGTGCCACTGGGTTCAGGTTCCATAACGAAGTGCCAGTGCCACAGACAGGTGGGTGAAAACCTCA--GACCCggccgggcatggtggctcacgcctgt-gtcgca----tttgggag--------------------cgaggaccgga--ttgaa---agcatggccaacacagtgaagccccgtctctaccaaaaacacaaaaTTAgccgggcatggtggctcacgcctgtgatcccagcagtttgggagggcgaggcaggtggatcacctgaggtcaggag i calJac3.chr22_GL285922_random C 0 I 218 e canFam3.chr1 20132918 2038 - 122678785 I e macFas5.chr19 55829756 16 + 59248254 I a score=269628.000000 s hg38.chr19_GL949747v2_alt 694920 179 + 729520 gcagagggtgcagtgagccgagatcgcatcattacactccatcctgggcaataaaagcaaaactccatctcaa--------aaaaaaaaaaaaaaatcaca-gtcccagaggctggaagtcccagatcaaggtgtgggcagggctggttccctctcagggccctcagggaggatccgctctggtctct s panTro4.chr19 59962300 179 + 63644993 gcagagggtgcagtgagccgagatcgcgtcattacactccatcctgggcaataagagcgaaactccatctcaa--------aaaaaaaaaaaaaaatcaca-gtcccagaggctggaagtcccagatcaaggtgtgggcagggctggttccctctcagggccctcagggaggatctgctctggtctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56909540 170 + 60714840 gcagagggtgcagtgagccgagatcacgtcattacactccatcctgggcaataagagcaaaactccatctcaa--------aaaaaaa---------caca-gtcccggaggctggaaggaccagatcaaggtgtgggcagggctggttccctctgagggccctcagggagaatctgctctggcctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103384993 178 - 106955855 gcagaggtggcagtgagccgagatcgcgtcattacactccatcctgggcaacgagagcaaaactccatttcaa--------aaaaaaaaaaaaaaa-atca-gtcctggaggctggaagtcccagatcaaggtgtgggcagggctggttccctctgagggcccccagggagaatctgctctggcctct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60687977 184 + 64156825 gcaggggctgcagtgagcagaggtcgcaccattacactccagcctgggcaacaagagcgagactccatctcaatcactcactcaatcaattaat---caca-gtcccagaggctggaagtcccagatcaaggtgtgggcagggctggttccctctgagggccctcagggagaatctgctctggcctct i rheMac3.chr19 C 0 I 1362 s papAnu2.chr19 47938803 177 + 51301725 gcaggggctgcagtgagaagagatcgcaccattacactccagcctgggcaacaagagcgagactccatctcaa--------tcaatcaatcaat---cacacGTCCCTGAAGCTCGATGTCccagatcaaggtgtgggcaagGCTGGTTCCCTCTGAGGGCCCTCAGGGAGAAtctgctctggcctct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47640740 172 + 50890351 gcagaggctgcggtgagcagaggtcgcaccattacactccagcctgggcaacaagagcgagactccatctcaa--------tcaatcaatacata--caca-gtcccagaggctggaagttccagatcaaggtgtgggcagggctggttccctctgagggccctcagggagaatctgctctgg----- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I a score=79619.000000 s hg38.chr19_GL949747v2_alt 695099 101 + 729520 ctccttggctcacaggtgaccatctcctctctccctcttcccttcctcttccctttggagctgtctCTTTTTTTTTTTTC-----ATTTTTCCTTTTTTAAtttta s panTro4.chr19 59962479 95 + 63644993 ctccttggctcacaggtgaccatctcctctctccctcttcCCTTC-----------GGAGCTGTCTCTTTTTTTTTTTTCCTTTTATTTTTCCTTTTtaaatttta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56909710 94 + 60714840 ctccttggctcacaggtgaccatctcctctctccctcttcCCTTC-----------GGAGCTGTCTTTTTTTTTTTTTCC-TTTTAtttttccttttttaatttta i ponAbe2.chr19 C 0 I 5419 s nomLeu3.chr10 103385171 90 - 106955855 ctccttggttcagaggtgaccatctcctctctccctcttcccttcctcttccctttgGAG----CTCTTTTTTTTTTTTC------------CTTTTTTAATTTTA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47938980 95 + 51301725 ctccttggctcacaggtgaccgtctcctctctcccttctcccttcctcttccctttggagctatctctctcttttttttt--------t---ctttttaaattttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47640912 73 + 50890351 -------------------------cttctctcccttctCCCTTCCTCTTCCCTTTGGAGCTGTCTCTCTCTTTTTTTTT--------TTTCCTTTTTAAATTTTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60688161 1362 + 64156825 I a score=144.000000 s hg38.chr19_GL949747v2_alt 695200 2 + 729520 ga s panTro4.chr19 59962574 2 + 63644993 ta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103385261 2 - 106955855 ta i nomLeu3.chr10 C 0 I 652 s papAnu2.chr19 47939075 2 + 51301725 tt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47640985 2 + 50890351 TA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56909804 5419 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60688161 1362 + 64156825 I a score=61656.000000 s hg38.chr19_GL949747v2_alt 695202 101 + 729520 ---------------tttttcagacatggtctcactatgttgcccaggctgg---------------tctca----------------aactcttgaactcaagcaatcctcctgctttggcctcccagagtgctgcaatttca-----CTG s panTro4.chr19 59962576 101 + 63644993 ---------------tttttcagacatggtctcactatgttgcccaggctgg---------------tctca----------------aactcttgacctcaagcaatcctcctgctttggcctcccagagtgctgcaatttca-----CTG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103385915 101 - 106955855 ---------------tttttcagacatggtctcactatgttgcccaggctgg---------------tctca----------------aactcttggcctcaagcaatcctcctgctttcgcctcccaaagtgctgcaatttca-----CTG i nomLeu3.chr10 I 652 C 0 s papAnu2.chr19 47939077 140 + 51301725 t------------tttttttgagacggagtctcgctctgtcacccaggctggagtgcagtggccgaatctcagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47640987 116 + 50890351 TGCATATAtatactttttttcagacatggtctcactatgttgcccaggctgg---------------tctca----------------aacttttggcctcaagcaatcctcctgctttgccctcccaaagtgctgcgatttca-----CTG i chlSab2.chr6 C 0 I 43 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56909804 5419 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60688161 1362 + 64156825 I a score=27923.000000 s hg38.chr19_GL949747v2_alt 695303 120 + 729520 ------CCCCCAGCCTAtttttttttttttgggggggggagatggagtttcactcttgtcacccaggctggagtgcaatggtgcgatcttggctcactgcaacctctgcctcccaggttcaaacaa s panTro4.chr19 59962677 111 + 63644993 ------CCCCCAGCCTAtttttttt---------gggggagatggagtttcactcttgtcacccaggctggagtgcaatggtgcgatcttggctcactgcaacctccgcctcccaggttcaaacaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103386016 118 - 106955855 ------CCCCCAACCTAttttttttttttttt--tttggagatggagtttcactcttgtcacacaggctggagtgcaatggtgcgatcttggctcactgcaacctctgcctcccaggttcaaacaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47939217 89 + 51301725 ccacctcgcccggctaagtttttgtattttt---agtagagacggggtttcact-gtgttagccaggatgg---------------tctcgatctcctg--------acctcgtga---------- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56909804 5419 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e chlSab2.chr6 47641103 43 + 50890351 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60688161 1362 + 64156825 I a score=244297.000000 s hg38.chr19_GL949747v2_alt 695423 367 + 729520 ttctcctgcctcagcctcccaagtagct-ggactacaggcatccaccaccacaccggg--------ttaattttt---tgtat-------ctttagtagagacggggcttcaccatgttggccaggctagtctcacactcctgac-ctc--gtgatccacctacctcagcctcccaaagtgctgggactgcaggcgtgagccaccacactcagtcTACTTGGCCTAttttttatatttcttt---gagacagggtctccctc-tgacacctgggctggagtacagtggcgcaatcactgctcactgcagcctcaacctcccaggctcaagcagtcttcttg-ctcagc-----------ctcccaagtagctggggccacaggcatgcgccaccatgcccagcta s panTro4.chr19 59962788 367 + 63644993 ttctcctgcctcagcctcccaagtagct-ggactacaggcatccaccatcacacctgg--------ttaattttt---tgtat-------ctttagtagagacggggcttcaccatgttggccaggctagtctcacactcctgac-ctc--gtgatccacctgcctcagcctcccaaagtgctgggactgcaggcgtgagccaccacactcagtcTACTTGGCCTAttttttatatttcttt---gagacagggtctccctc-tgacacctgggctggagtacagtggcgcagtcactgctcactgcagcctcaacctcccaggctcaagcagtcttcttg-ctcagc-----------ctcccaagtagctggggccacaggcatgcgccaccatgcccagcta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56915223 368 + 60714840 ttctcctgcctcagcctctcaagtagct-gaaccacaggcatccaccaccacattagg--------ttaattttt---tgtat-------ctttagtagagacggggcttcaccatgttggccaggcaagtctcaaactcctgacaatc--atgatccacctgcctcagcctcccaaagtgctgggattgcaggcgtgagccaccacactcagtcCACTTGGCCTAttttttatatttcttt---gagacggggtctgtctc-tgacacctgggctggagtacagtggcacaatcactgctcactgcagcctcaacctcccaggctcaagcaatcttcttg-ctcagc-----------ctcccaagtagctggggccacaggcacgtgccaccatgcccagcta i ponAbe2.chr19 I 5419 C 0 s nomLeu3.chr10 103386134 375 - 106955855 ---ttctgcctcagcctcctgagtagct-ggactacaggcacctgccaccacacctgg--------ttaattttt---tgtat-------ctttactagagacggggcttcaccatgttggccaggctagtctcaaactcctgac-ctc--gtgatccacctgcctcggcctcccaaagtgctgggagtgcaggcgtgagccaccacacttggtcCACTCGGCCTAttttttatatttcttt---gagacggggtgtccctc-tgacacctgggctggagtacagtggtgcaatcactgctcactgcagcctcaacctcccaggctcaagcagtcttcttg-ctcagcctcccaagtagctcccaagtagctggggccacaggcacgtgcccccatgcccagcta i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47939306 368 + 51301725 tccgcccgtctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggccttctttttaaattttatatgcatatatatactttttttcagacatggtctcactatgttgcccaggctggtctcaaacttttggc-ctcaagcaatcctcctgctttgccctcccaaagtgctgtgatt-----------tcaccac-------------ggcctattttttttttttttttttggaggtggagtttcattcttttcgcccaggctggagtgcaatggcgcgatctcagctcac-gcaactttcacctcccaggttcaaacaattctcctgcctcagc-----------ctcccgagtagctgggactacaggcatccgccaccatgcccggcta i papAnu2.chr19 C 0 I 1261 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e chlSab2.chr6 47641103 43 + 50890351 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60688161 1362 + 64156825 I a score=96516.000000 s hg38.chr19_GL949747v2_alt 695790 200 + 729520 GCACgtctgtttctgtgcgcaaatctccccttttcataaggacaccagtcactggattagggcccaccctaatgacctcattttcacttcaggacctctgtaaacacccacctctaaatgaagtcacatgctgagggatgggggttcaggatcccaacctatccttgggggtggaggacacaatggaattcataaTGCTC s panTro4.chr19 59963155 200 + 63644993 GCACgtctgtttctgtgcgcaaatttccccttttcataaggacaccagtcactggattagggcccaccctaatgacctcattttcacttcaggacctctgtaaacacccacctctaagtgaggtcacatgctgagggacgggggttcaggatcccaacctatccttgggggtggaggacacaatgaaattcataaTGCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56915591 200 + 60714840 GCACgtctgtttctgtgtgcaaatttccccttttaataaggacaccagtcactggattagggcccaccctatagacctcattttaacttcaggacctctgtaaacacccacctctaaatgaggtcacatgctgagcgacgggggttcaggatcccaacctatccttgggggtggaggacacaatggaattcataaTGCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103386509 197 - 106955855 GCACgtctgtttgtgtgtgcaaatttccccttttaataaggacaccagtcactggattagggcccaccctaatgacctcattttaacttgaggacctccgtaaacacccacctgtaagtgaggtcacatgcggagggacagggggtcaggagcccaacctatcctt-ggggtggaggacacaaGGGAATCAGTAAAA--A i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e chlSab2.chr6 47641103 43 + 50890351 I e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60688161 1362 + 64156825 I a score=528242.000000 s hg38.chr19_GL949747v2_alt 695990 703 + 729520 CCGAAGTGGTTTTCGGCGGGGATCGTGAATTAGGTGTCCAGCGCGTAACACAC--AGACACCATCTGGTTCTCTGTGTGAGAAGGAGGGGGTtgcagcacacccgtcatgaataccagctctggagcaggacagacaggttcaaagcctggctccaccccgaccagctgcatgatcctggccaagtcacatcacttctctgtgactcagtttactccttgtaaaaaaaaaaaaaaaaaaaggataataacatcacctgcctggtacaactgtatacttactcattcagtaagtattttctaagcacctattactgggcactggaaatacagggtggacagcacagccgaggccccgtccgtgtggaccggacattccagtgcagctgagagccacttccactcgtgagagaatctacccgtgacagagctgcgtggaagctgacaggaggcccctctcaggaggtgacgcagaaactgggaccgggaaaatgaggcagggcccacgtgcggagacccagggaagggggatgcaggcagcaggcgcagcacgggtaaggcccaaaggcggga-CAGGGAGACTCCACTCACAGCTGGGCGCCCAGGAGTGCCGCCAGCTTCTGGTGTttt----gttttg---------------gttttttttctttttttttttgagatgaagtctcactctgccacccaggctggagtgcagtggtgtgatct s panTro4.chr19 59963355 715 + 63644993 CCGAAGTGGTTTTCGGCGGGGATCGTGAATTAGGTGTCCAGCGCGTAACACACAGAGACACCGTCTGGTTCTCTGTGTGAGAAGGA--GGGTtgcagcacacccgtcatgaatacgagctctggagcaggacagacgggtccaaaccctggctccaccccgaccagctgcacgatcctggccaagtcacatcgcttctctgtgactcagtttactccttgtaaaaaaaaaaaaaaaaa---gataataacatcacctgcctggtacaactgtATacttactcattcggtaagtattttctaagcacctattactgggcactggaaatacagggtggacagcacagccgaggccccgtccgtgtggaccggacattccagtgcagctgagagccacttccactcgtgagagaatctacccgtgacagagctgcgtggaagctgacaggaggcccctctcgggaggtgacgcagaaactgggaccgggaaaatgacgcagggcccatgtgcggagacccagggaaggggaatgcaggcagcaggcgcagcacgggtaaggcccaaaggcgcga-CAGGGAGACTCCACTCACAGCTGGGCGCCCAGGAGTGCCGCCGGCTTCTGGtgtttt----gttttgttttttttttctttttttttttttttttttttttttgagatgaagtctcactctgccacccaggctggagtgcggtggtgtgatct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56915791 683 + 60714840 CCAAAGTGGTTTTCGGCAGGGATTATGAATTAGGTGTCCAGTGTGTAACACACAGAGACACCGTCTCGTTCTCTGTGTGAGAAGGA-GGGGTTGCGGCACACCCgtcatgaatacgagctctggagcaggagagacgggttcaaaccctggctccaccccgaccagctgcatgatcctgcccaagtcacatcgcttctctgtgactcagtttactccttgtaaaaaaaaaaaaaaaaa--ggataataacatcacctgcctggtacaactgtATAGTtactcattcggtaagtattttctaa--------------gcactggaaatacagggtggacagcacagccgaggccccgtccgtgtggaccggacattccagtgcagctgagagccacttccactcgtgagagaatctacccgtaacagagctgggtggaagctgacaggaggcccctctcaggaggtgacacagaaactgggaccgggaaaatgaggcagggcccacatgcggagacccagggaaggggaatgcaggcagcaggcacagcacaggtaaggcccaaaggcgggagcaggGAGACTCCACTCACAGCTGGGTGCCCAGGAGTGCCGCCAGCTTCTGttgtttt-------------------------gtttttggtcttttcttttttgagatgaagtctcactccgccacccaggctggagtgcagtggtgtgatct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103386706 674 - 106955855 CCGAAGTGGTTTTCAGCGGGGATCATGAATTAGGTGTCCAGTGCGTAACACAC--ACACACCGTCTCGTTCTCTGTG---GGAGGA-GGGGTTGCAGCACACCCGTCCTgaatacgagctctggagcaggacagacggcttcaaaccctggctccaccccagccagctgcatgatcctggccaagtcacatcgcttctctgtgactcagtttactccttgttaaaaaaaaaa--------ggataacatcatcacctgcctggtacaactgtACAGttactcattcagtaagtattttctaagcacctgttactgggcactggaaatacagg-----------------------------gtggaccggacaTTCCAGTGCAGCTGAGAGCCACTTCCACTCGTGAGAGAATCTACCCGTGACAGAGCTGTGTGGAAGCTGACAGGAGGCCCCCCTCAGGAGGTGACGCAGAAACTGGGACCAGGAAAATGAAGCAGGGCCCACGTGCGGAGACCCAGGGAAGGGGAATGCAGGCAGCAGGCACAGCACGGGTAAGGCCCAAAGGCAGGAGCAGGGAGACTCCACTCACGGCTGGGCACCCAGGAGTGCCGCTGGCTTCTGTTGTTTGTTTGGTTTTGGtttttt--------cttctttttttttttttttttgagatgaagtctcactctgccacccaggctggagggcagtggtgtgatct i nomLeu3.chr10 C 0 M 1272 s rheMac3.chr19 60689523 671 + 64156825 CCGAAGTGGCTCTCAGCGGGGATCATGAATTAGGTGTCCAGTGCGTAACACACACAGACACCGTCCCGTTCTCTGTGTGAGAAGGt-ggggttgcagcacacctg--------------------------------agttcaaaccctggctccaaccagaccagctgcctgaccctggccaagtcacatcgcttctctgtgacgcagtttactcctcattagaaaaaaaaaaaa----ggataacagcatcacctgcctggtgcgactgtATAGttactcattcggtaagtattttctaagcatctattactgggcactggaaatacagggtggacagcacagccgaggccccgtccgcatagaccggacattccagtgcagctgagacccgcttccactcgtcagagaatctacccgtgacagagctgcatgggagctgacaggaggcccctctcaggagctgacacaaaagctgggaccaggaaaatgaggcagggcgcacgtgcggagacccagggaaggggaatgcaggtagcgggcacatcgcaggtgaggccccaaggcgggagcaggGAGACTCCACTCACAGCTGGGGACCCGGGAGTGCCGTCGGCTTCTGCTGTTTT----GGTTTGTT-------------Tttttctttttttttttttttgagatgaagtctcactctgccacccaggctggagtgctgtggtgtgatct i rheMac3.chr19 I 1362 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e chlSab2.chr6 47641103 43 + 50890351 I e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I a score=44226.000000 s hg38.chr19_GL949747v2_alt 696693 91 + 729520 tggcccatggcccactgcaacctctaccgcctgggttcaggcgatt-------ctgctgcctcagcctcccgagtactgggattacaggtgcccgcca s panTro4.chr19 59964070 91 + 63644993 tggcccgtggcccactgcaacctctaccgcctgggttcaagcgatt-------ctgctgcctcagcctcctgagtactgggattacaggtgcctgcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56916474 98 + 60714840 tggcccatggcccactgcaacctctaccgcctgggttcaagcgattctgctgcctgctgcctcagcctcccgagtactgggattacaggtgcccgcca i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60690194 84 + 64156825 -------tggctcactgcaacctctacagcctgggttcaaatgatt-------ctcctgcctcagcctcccgagtactgggattacaggtgcctgcca i rheMac3.chr19 C 0 I 1076 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e chlSab2.chr6 47641103 43 + 50890351 I e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I a score=108789.000000 s hg38.chr19_GL949747v2_alt 696784 436 + 729520 ccgcaccctgctaatttttgcatttttagtagagacggggtttcaccatcttggtcaggctggtcttgaattcttcacctcgtgatccacccgcctctgcctcccaaagtgcagggattacaggtgtgagccaccgcgcccagccTGtttttttttttttctttttatgagagggaagctcactcagtggcccaggctggagtgcagtggcgcgatctcagctcacagcaacctccgccgccagggctcaaacgatcctcccacctcagccttccacatagctg-aaccacaggcgcccgacaccacaagcagctacttttaaaattttttgtagaaatggggtttggctatgttgcttaggctggtctcgaatttctgagcttaggcaattcgcccacctcggcctcccaaagtgctgggattgcaggcgtgggcc s panTro4.chr19 59964161 436 + 63644993 ccgcaccctgctaatttttgcatttttagtagagatggggtttcaccatcttggtcaggctggtcttgaattcttcacctcgtgatccacccgcctctgcctcccaaagtgcagggattacaggtgtgagccaccgcgcccagccTGtttttttttttttctttttatgagagggaagctcactcagtggcctaggctggagtgcagtggcgcgatctcagctcacaacaacctccgccgccagggctcaaacgatcctcccacctcagccttccacatagctg-aaccacaggcgcccgacaccacaagcagctacttttaaaattttttgtagaaatggggtttggctatgttgcttaggctggtctcgaatttctgagctcaagcaattcgcccacctcggcctcccaaagtgctgggattacaggcatgggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56916572 424 + 60714840 ccgcacccggctaatttttgcatttttagtagagacggggtttcaccatcttggtcaggctggtcttgaattcttgacctcgtgatccacccgcccccgcctcccaaagtgctgggattacaggtgtgagccaccacgcccagccTG-------Ctttttctttttatgagagggaatctcactcagtggcccaggctggagtgcagtggctcaacctcagctcactgcaacctccgccgccagggctcaaacgatcctcccaactcagccttccacatagctgaaaccataggcgcccgacaccacgagcagctacttttaaa--tttttgtagaaatggggtttggctatgttgcctaggctggtctcgaatttct--acctcagcaatccgcccacctcagcctcccaaagtgctggga-tacaggcatggg-c i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e chlSab2.chr6 47641103 43 + 50890351 I e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=17769.000000 s hg38.chr19_GL949747v2_alt 697220 54 + 729520 acagtgcctggccTGTTGTTTTGTTTATCTGGGAACTGCCTCAACTTTTttttt s panTro4.chr19 59964597 48 + 63644993 acagtgcctggtcttttgttttgtttATCTGGGAACTGCCTCAAC------ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56916996 51 + 60714840 aca-tgcctggccTGTTG-TTTGTTTATCT-GGAACTGCCTCAACTTTTTTTTT i ponAbe2.chr19 C 0 I 803 s chlSab2.chr6 47641146 47 + 50890351 ACAGTGCCTGGCCTGTTGTCTTGTTTATCTGGGAACTGCCTCAACCt------- i chlSab2.chr6 I 43 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=37043.000000 s hg38.chr19_GL949747v2_alt 697274 137 + 729520 ttttttttttttttggacacagggtctcaccccgagtgcagtggtacaatcaaagctcactgcaggccgggcgtggtggctcacatctgtaatcccagcactttgggaggccgaggcgggcagatcacctgaggtca s panTro4.chr19 59964645 137 + 63644993 ttttttttttttttggacacagggtctcaccccgagtgcagtggtacaatcaaagctcactgcagTccgggtgcggtggctcacatctgtaatcccagcactttgggagaccgaggcgggcagatcacctgaggtca i panTro4.chr19 C 0 C 0 s chlSab2.chr6 47641193 137 + 50890351 ttttttttttttttggacacagggtctcaccctgagtgcagtggtacaatcaaagctcactgcaggccaggcgcggtggctcacttctgtaatcccagcactttgggaggccgaggcgggcggatcacctgaggtca i chlSab2.chr6 C 0 I 12 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56917047 803 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=13057.000000 s hg38.chr19_GL949747v2_alt 697411 138 + 729520 accagcctgaccaacatggtgaaaccctgtctctacctaaaacaaaaaagtAgccgggcatggtggcaggtgcctgtaatcccagctactcaggaggctgaggcaggagaattatttgaaaccaggagatggaggttg s panTro4.chr19 59964782 138 + 63644993 accagcctgaccaacatggtgaaaccctgtctctacctaaaacaaaaaagtAgccgggcatggtggcaggtgcctgtaatcccagctactcaggaggctgaggcaggagaattatttgaaaccaggagatggaggtta i panTro4.chr19 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56917047 803 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e chlSab2.chr6 47641330 12 + 50890351 I e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=19582.000000 s hg38.chr19_GL949747v2_alt 697549 74 + 729520 cagcctgaccaacaggaagaaaccccgtctctactaaaaatacaaaattagccgggcgtggtggcgcatgcctg s panTro4.chr19 59964920 74 + 63644993 cagcctgaccaacatgaagaaaccccgtctctactaaaaatacaaaattagccgggcgtggtggcgcatgcctg i panTro4.chr19 C 0 C 0 s chlSab2.chr6 47641342 74 + 50890351 cagcctgaccaacatgaagaaacgccgtctctattaaaaatacaaaattagccaggcatggtggcgcatgcctg i chlSab2.chr6 I 12 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56917047 803 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=13407.000000 s hg38.chr19_GL949747v2_alt 697623 26 + 729520 taatcccagctactcgggaggctgag s panTro4.chr19 59964994 26 + 63644993 taatcccagctactcgggaggctgag i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47940935 26 + 51301725 taatcccagttactcggaaggttgag i papAnu2.chr19 I 1261 C 0 s chlSab2.chr6 47641416 26 + 50890351 taatcccagttactcggaaggttgag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56917047 803 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=236845.000000 s hg38.chr19_GL949747v2_alt 697649 317 + 729520 gcaggagaatcacttgaacccaggaggtggaggatgcc-----------------------gtgagccaagatcccgtcattgca--ccagcctgggcaacaagagcaaaactccgtctt--aaaaaaaaaaaaaaaaaaTCCctcactgcagcctcaacctcccaggctcaagcaatcctcccacctccacctcccaagtagttgggactacaagtgcacaccatcacgcctgcctcattgttttttatttt----------tttttt----gagatggagtctcactctgtcacccaggctggagtgcagtggcgccatctcggctcactgcaagctccacctcccgggttcacg----------------------c s panTro4.chr19 59965020 341 + 63644993 gcaggagaatcacttgaacccaggagatggaggatgctgaacccaggagatggaggatgcagtgagccaagatcccgccattgca--ccagcctgggcaacaagagcaaaactccgtctttaaaaaaaaaaaaaaaaaaaTCCctcactgcagcctcaacctcccaggctcaagcaatcctcccacctccacctcccaagtagttgggactacaagtgcacaccatcatgcctgcctaattgttttgta-ttt----------tttttt----gagatggagtctcactctgtcacccaggctggagtgcagtggcgccatctcggctcactgcaagctccagctcccgggttcaca----------------------c i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103388653 320 - 106955855 gcaggagaatcacttgaacccaggaggtggaggatgca-----------------------gtgagccaagatcccaccattgta--ccagcctgggcaacaagagcaaaactccgtctc--aaaaaaaaaaaaaacaaa-aCctcactgcagcctcaacctcccaggctcaagcaatcctcccacctccacctcccaaatagttgggactacaagtgcacaccatcacgcctgcctaattgttttgtttttt----------tttttttttggagatggagtctcactctgccacccaggctggagtgcagtggcgccatctcggctcactgcaagccccacctcccgggttcaca----------------------c i nomLeu3.chr10 M 1272 C 0 s papAnu2.chr19 47940961 317 + 51301725 gcaggagaatcacttgaacccaggaggcggaggttgta-----------------------gtgagccgagatcctggcattgca--ccagcctgggaaacaagagcaaaactccgtctc--aaaaaaaaaaa---------cctcactgcagcctcaacctcccaggctcaagcaatcctcccacctcagcctcccaagtaggtgggactacaggtgcacaccatcatgtctgcctaattgttttttgtttttttgttttg-tttttt----gagacggagcctcgctctgtcacccaggctggagtgcagtggcgcgatctcagctcactgcaagctccgcctccctggttcagg----------------------c i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47641442 339 + 50890351 gcaggagaatcacttgaacccaggaggcggaggttgca-----------------------gtgagccgagatcgtgccattgcactccagcctgggcaacaagagcaaaactccgtctc--aaaaaaaaa------------ctcactgtagcctcaacctcccaggctcaagcaatcctcccacctcagcctcccaagtagttgggactacaggtgcacaccatcacgcctgcctaattgttttttgtttttttgttttgttttttt----gagacggagtcacactctgtcgcccagactggagtgcagtggcgcaatctcagctcactgcaagctccacctcccaggttcaggccattctcctcccgggttcacac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56917047 803 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=116073.000000 s hg38.chr19_GL949747v2_alt 697966 115 + 729520 cattctcctgcctcagcctcccaagtagctggg-ttacaggtgcccgccaccacgcccggctaattttttt-------------------------gtgtttcttagtagacacggggtttcaccgtgttggccaggatgg s panTro4.chr19 59965361 140 + 63644993 cattctcctgcctcagcctcccaagtagctggg-ttacaggtgcccgccaccacgcccggctaatttttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggtttcaccgtgttggccaggatgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56917850 115 + 60714840 cattctcctgcctcagcctcccaagtagctggg-ttacaggtgcccaccaccatgcccggctaactttttt-------------------------gtattttttagtagacacggggtttcaccgtgttagccaggatgg i ponAbe2.chr19 I 803 C 0 s nomLeu3.chr10 103388973 115 - 106955855 cattctcctgcctcagcctcccaagtagctggg-ttacaggtgcccgccaccacacccggctaattttttt-------------------------gtattttttagtagacacagggtttcaccgtgttagccaggatgg i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47941278 115 + 51301725 cattctcctgcctcagcctcctgagtagctggaactacaggaacccgccaccacgactggctaattttttt-------------------------gta-tttttagtagagacggggtttcaccgtgttagccaggatgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47641781 116 + 50890351 cattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccactgcacccagctaatttttct-------------------------gtattttttagtagagacggggtttcaccatgttagccaggatga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=863411.000000 s hg38.chr19_GL949747v2_alt 698081 493 + 729520 tctcgatctcctgaccttgtgatccgcccgcctcagcctcccaaagtgctgggattacaggcgtga--------gcctg-cacgcctgcctgattgttttgtattttttgtagagatgaggtcttgctatgttgcccaggctgatctcaaactccCTGATAAACAAGGCTGTGGGTACCTGCTTCCTGGGGCTCTTTGCTTTGTGTTCTTTCTAGTCGGGAGCTGGGAAGAGCCACAGCTTCCAGCTTTGTCAGAGTGTCATCTCACAaac--tgatcttcccaaaacttctgtctcccaaagtgccgggatgacaggcgtgaaccgctgcacctggccTGCCCCAGTGTGGTAGAATACACACCACATAAAATGGACGATCTTCACTATTTTTAAATCCACTGCTGTCTTTATTCCTGGCTGTTGATCTTAGGAAAACACCAAGAAGCTGGTACTTGATTTGCT--AAAAAAGTCACAGACACAGCTTTACTTAATCCTCTAGAG s panTro4.chr19 59965501 503 + 63644993 tctcgatctcctgaccttgtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccg-cacgcctgcctgatcgttttgtattttttgtagagatgaggtcttgctatgttgcccaggctgatctcaaactccCTGATAAACAAGGCTGTGGGTACCTGCTTCCTGGGGCTCTCTGCTTTGTGTTCTTTCTAGTCTGGAGCTGGGAAGAGCCACAGCTTCCAGCTTTGTCAGAGTGTCATCTCACAAACTgtgatcttcccaaaacttctgtctcccaaagtgccgggatgacaggcgtgaaccactgcacctggccTGCCCCAGtgtgatagaatacacaccacataaaatggaccatcttcactatttttaaatCCACTGATGTCTTTATTCCTGGCTGTTGATCTTAGGAAAACACCAAGAAGCTGGTACTTGATTTGCT--AAAAAAGtcacagacacagctttacttaatcctctagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56917965 502 + 60714840 tctcaatctcctgaccttgtgatccacccacctcagcctcccaaagtgctgggattacaggcgtgagccactgcgcctg-caagcctgcctaattgttttgtattttttgtacagatgaggtcttgctatgttgcccaggctgatctcaaactccCTGATAAACAAGGCTGTGGGTACCTGCTTCCTGGGGCTCTTTGCTTTGTGTTCTTTCCAGCCTGGTGCTGGAAAGAGCCACAGCTTCCAGCTTTGTCAGAGTGTCATGTCACAAACTgtgatcttcccaaaacttctgtctcccaaagtgccaggataacaggcgtg-accactgcacctggccTGTCCaaatgtggtagaatacacaccacataaaatgtaccatcttcactatttttaaatCCACTGATGTCTTTATTCCTGGCTGTTGATCTTAGGAAAACACCAAGAAGCTGGTACTTGATTTGCT--AAAAAAGTCACAGACACAGTTTTACTTAATCCTCTAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103389088 505 - 106955855 tctcgatctcctgaccttgtgatccgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccacgccca-caagcctgcctaattgttttgtattttttgtagagatgaggtcttgctatgttgcccagactgatctcaaactccCTGATAAACAAGGCTGTGGGTACCTGCTTCCTGGGGCTCTTTGCTTTGTGTTCTTTCTAGTCTGGAGCTGGAAAGAGCTACAGCTTCCAGCTCTgtcagggtgtcatctcacaaactgtgatcttcccaaaacttctgtctcccaaagtgccaggaagacaggcgtgagccactgcacctggccTGCCCaaatgtggaagaatacacaccacataaaatgtaccatcttcactatttttaaatCCACTGATGTCTTTATTCCTGGCTGTTGATCTTAGGAAAACACCAAGAAGCTGGTACTTGGTTTGCTAAAAAAAAGTCACAGACACAgctttacttaatcctctagtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60691354 498 + 64156825 TctccatctcctgaccttgtgatccacccaccttggcttcccaaagtgctgggattacacgcgtgagccaccgcgcccatcacgcctgcctaattgttttgtattttttgtagagatgaggtgttgctctgttgcccaggctgatctcaaactccCTGGTGAACAAGGCTGTGGGCA----CTTCCTGGGGCTCTTTGCTTTGCGTTCTTTCTAGTCTGGCGCTGGAAAGAGCTGCGGCTTCCAGCTTTGTCAGAGTGTCA-CTCACAAACTgtgatcttcccaaagcttctgtctcccaaagtg-cgggatcacaggcgtgaacccttgcaccggaccTGCCCaaatgtggcagaatacacacgacataaagtgcaccatcttcactatttttaaatCCACTGATGTCTTCATGCCTGGCTGTTGATCTTAGGAAAACACCAAGAAGCTGGTACTTGATTTGCT--AAAAATGTCACAGACACAGCTTTACTTCATCCTCTAGAG i rheMac3.chr19 I 1076 I 72 s papAnu2.chr19 47941393 499 + 51301725 tctcgatctcctgaccttgtgatccacccacctcggcctcccaaagtgctgggattacacgcgtgagccaccacacccatcacGCCTGCCtaattgttttgtactttttgtggagatgaggtcttgctatgttgcccaggctgatctcaaactccctgaTAAACAAGGCTGTGGGCA----CTTCCTGGGGCTCTTTGCTTTGCGTTCTTTCTAGTCTGGCGCTGGAAAGAGCCACGGCTTCCAGCTTTGTCAGAGTGTCA-CTCACAAACTGTGATCTTCCCAAAACTTCTgtttcccaaagtgccgggatcacaggcgtgaacccTTGCACCTGGCCTGCCCAAATGTGGCAGAATACACATGACATAAAATGCACCATCTTCACTATTTTTAAATCCACTGATGTCTTCACGCCTGGCTGTTGATCTTAGGAAAACACCAAAAAGCTGGTACTTGATTTGCT--AAAAATGTCACAGACACAGCTTTACTTCATCCTCTAGAG i papAnu2.chr19 C 0 I 71 s chlSab2.chr6 47641897 499 + 50890351 tctcgatctcctgaccttgtgatccgcccgccttagcctcccaaagtgctgagattacaggcatcagccaccgcgcccatcacgcctgcctaattgttttgtattttttgtagagatgaggtcttgctctgttgcccaggctgatctcaaactccCTGATGAACAAGGCTGTGGGTA----CTTCCTGGGGCTCTTTGCTTTGCATTCTTTCTAGTCTGGCACTGGAAAGAGCCACGGCTTCCAGCTTTGTCAGAGTGTCAGCTCACAAACTgtgatcttcccaaaacttctgtctcccaaagtg-cgggatcacaggcgtgaacccttgcacctggccTGCCCaaatgtggcagaatacacatgacataaaatgcaccatcttcactatttttaaatCCACTGATGTCTTCATGCCTGGCAGTTGATCTTAGGAAAACACCAAGAAGCTGGTACTTGATTTGCT--AAAAATGtcacagacacagctttacttcatcctctagag i chlSab2.chr6 C 0 I 72 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I a score=276317.000000 s hg38.chr19_GL949747v2_alt 698574 117 + 729520 Aggctgggcgtggtggctcatgcctgtaatcccagcactttgggaggccgaggtggctggatcatgaggtcaggagatcgagaccatcctggctaacacggt--gaaaccccgtctcta s panTro4.chr19 59966004 117 + 63644993 aggccgggcgtggtggctcatgcctgtaatcccagcactttgggaggccgaggtggccggatcatgaggtcaggagatcgagaccatcctggctaacacggt--gaaatcccgtctcta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56918467 117 + 60714840 Aggccgggcgtggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcggatcatgaggtcaggagattgagaccatcctggctaacacggt--gaaaccccgtctcta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103389593 117 - 106955855 aggccaggcgcggtggctcacacctgtaatcccagcactttgggaggccgaggcaggcggatcatgaggtcaggagattgagaccatcctggccaacacggt--gaaaccccgtctcta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60691924 117 + 64156825 Aggccgggcatggtggctcaagcctgtaatcccagcactttgggaggccgagacgggcggatcacaaggtcaggagatcgagaccatcctggctaacccggt--gaaaccctgtctcta i rheMac3.chr19 I 72 C 0 s macFas5.chr19 55829772 117 + 59248254 Aggccgggcgcggtggctcaagcctgtaatcccagcactttgggaggccgagacgggcggatcacgaggtcaggagatcgagaccatcctggctaacaccgt--gaaaccccgtctcta i macFas5.chr19 I 16 C 0 s papAnu2.chr19 47941963 119 + 51301725 cggccgggcgcggtggctcaagcctgtaatcccagcactctgggaggccgagacgggcggatcacgaggtcaggagatcgagaccatcctggctaatgcggtacgaaaccccgtctcta i papAnu2.chr19 I 71 M 2539 s chlSab2.chr6 47642468 117 + 50890351 Aggccgggcgcggtggctcaagcctgtaatcccagcacttagggaggcggaggcgggcagatcacgaggtcaggagatcgagaccatcctggctaacacagt--gaaaccccgtctcta i chlSab2.chr6 I 72 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I a score=10881.000000 s hg38.chr19_GL949747v2_alt 698691 8 + 729520 gtaaaaaa s panTro4.chr19 59966121 8 + 63644993 gtaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56918584 8 + 60714840 ctaaaaaa i ponAbe2.chr19 C 0 I 135 s nomLeu3.chr10 103389710 8 - 106955855 ctaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60692041 8 + 64156825 ctaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55829889 8 + 59248254 ctaaaaaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47642585 7 + 50890351 -ctaaaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e papAnu2.chr19 47942082 2539 + 51301725 M a score=227149.000000 s hg38.chr19_GL949747v2_alt 698699 173 + 729520 tataaaaaattagccgggcgtggtggcaggcgcctgtagtcccccgccactcgggaggctgaggcaggagaatggcatgaacccgggaggcggagcttggagtgagccgagatgt-gccactgtcctccagcctgggcgacaaagcaagataccgtctcag--------aaaaaaaaaaaa-a s panTro4.chr19 59966129 142 + 63644993 tataaaaaattagccaggcgtggtggcgggcgcctgtagtcccccgccact--------------------------------cgggaggcggagcttggagtgagccgagatgt-gccactgtcctccagcctgggcgacaaagcaagataccgtctcag-------aaaaaaaaaaaaa-a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56918727 172 + 60714840 tacaaaagattagccgggcgtggtggcgggcgcctgtagt-ccccgccacttggggggctgaggcaggagaatggcatgaacccgagaggtggagcttgcagtgagccgagatgt-gccactgcactccagcgtgggcgacagagcaagacaccgtctcaa--------aaaaaaaaagaa-a i ponAbe2.chr19 I 135 C 0 s nomLeu3.chr10 103389718 180 - 106955855 tataaaaaattagccgggcgtggtggcaggcgcctgtagt-ccccaccactcaggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatgc-gccactgctctccagcctgggcgacagagcaggacactgtctcaaaaaaaaaaaaaaaaaaaaaa-a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60692049 171 + 64156825 tacaaaaaactagccgggcgaggtggc-agcgcctgtagt-ccccgctactcgggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagctgagatccggccaccgcactccagcccgggcaacagagcgagactccatctcaa--------aaaaaaagaaaa-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55829897 169 + 59248254 tacaaaaaactagccgggcgaggtggc-ggcgcctgtagt-cccaggtactcgggaggctgaggcaggagaatggcgtcaaccagggaggcggagcttgcagtgagctgagatccggccactgcactccagcctgggcgacagagcgaga-tccgtctcaa--------aaaaaaa-aaaa-- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47642592 171 + 50890351 tacaaaaaattagccgggcgtggtggtgggtgcctgtagt-cccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagtttgcagtgagccgagatcacgccactgcactccagcttgggcaacagagcgaga--gagtctcaa--------aaaaaaaaaaaaa- i chlSab2.chr6 C 0 I 19 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e papAnu2.chr19 47942082 2539 + 51301725 M a score=244087.000000 s hg38.chr19_GL949747v2_alt 698872 250 + 729520 CCcctctagagaatcccagaaaatagaagga---attattccatttcccggaagaggaacgtgtggctaagagaggaggcatcacctgcccaggtgtgtccagccggGGTCCT-------------------CACTGTCTCAGGGACCTCAGTGCTCCGGACACCTGTGTCCACAAGCCAGAGACAGGATCAGAGGCGCCCTGGGTGggattgcctgggacagtgtgcatgaaggtgacagtgctgtacctggtacacagcaggtgcttaat s panTro4.chr19 59966271 253 + 63644993 cccctctagagaatcccagaaaatagaaggaattattattccatttcccggaagaggaacgtgtggctaagagaagaggcatcacctgcccaggTGTGTCCAGCCGGGGTCCT-------------------CACTGTCTCAGGGACCTCAGTGCTCCGGACACCTGTGTCCACAAGACAGAGACAGGATCAGAGGCGCCCTGGGTGggattgcctgggacagtgtgcatgaaggtgacagtgctgtacctggtacacagcaggtgcttaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56918899 267 + 60714840 aTCCTCTAGAGAATCCCAGAAAATAGAAGGA---ATTATTCCATTTCCCGGAAGAGGAACGTGTGGCTAAGAG--GAGGCATCACCTGCCCAGGTGTGTCCAGCCTGGGTCCTCGCTGCTCACAAGGCCCTGCACTGTCTCAGGGACCTCAGTGCTCTGGCCACCTGTCTCCACAAGCCAGAGACAGGATCAGAGGCGCCCCGGGTGGGACTGCCTGGGACAGTGTGCATGAAGGTGACAGTGATgtacctggtacacagcaggtgcttaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103389898 268 - 106955855 atcttctagagaatcccagaaaatagaatt----attattccatttcccggaagaggaacgtgtggctaagagaggaggcatcacctgcccaagTGTGTCCAGCCTGGGTCCTCGCTGCCCACAAGGCCCTGCACTGTCTCAGGGACCTCAGTGCTCTGGACACCTGTCTCCACAAGCCAGAGACAAGATCAGAGGCGCCCTGGGTGggactgcctgggacagtgtgcatgaaggtgacagtgctgtacctggtacacagcaggtgcttaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60692220 198 + 64156825 -------------------------------------------------------------------------aGGAGGCATCACCTGCCCAGGTGCATCCAGCCTGCATCCTTGCTGCCCACAAGGCCCTGCACTGTCTCA-GGACCTCAGTGCTCTGGACACCTGTCTCCACAAGCCAGAGACAGGAGGAGAGGCGCCCCGGGCGggattacctcggacagtgtgcatgaaggcaacagtgctgtacctggtacacagcaggtgcttaat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55830066 198 + 59248254 -------------------------------------------------------------------------aGGAGGCATCACCTGCCCAGGTGCATCCACCCTGGGTCCTTGCTGCCCACAAGGCCCTGCACTGTCTCA-GGACCTCAGTGCTCTGGACACCTGTCTCCACAAGCCAGAGATAGGATGAGAGGCGCCCCGGGCGggattacctcggacagtgtgcatgaaggcaacagtgctgtacctggtacacagcaggtgcttaat i macFas5.chr19 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e chlSab2.chr6 47642763 19 + 50890351 I e papAnu2.chr19 47942082 2539 + 51301725 M a score=553585.000000 s hg38.chr19_GL949747v2_alt 699122 388 + 729520 aaatgTT-CATCCACCTCTGAGACTCTGAGGCATTGCCCTCTCACTGTTCTTTGTGATCTCACCGTAGTGCCTCTCACCTACCCGACAACAGTGCCG----GCTCTTTCTTGATCCCCAAGGGCACAGCAGGGG-CTCAGT------------atgaatgaatgaatgaaccaacgaatg------------tgcacctgcacctgcctccctagggctgtgagtggcacaaggacagctctggttcatctcacacctccagcacct-ggtcaggtctgagatcacgtctgctaaataaatgaGGTCCCACAACTCCCCCATTCCTTGTTCATTTCCTGAGTACCCGTTTACTGAGCGGGGCACATTGACTCTGAAGAAGAAAGCTTTGGCCCTTT-CAGTGCCAGACTAGAAAAGAAAC s panTro4.chr19 59966524 378 + 63644993 aaatgTT-CATCCACCTCTGAGACTCTGAGGCATTGCCCTCTCACTGTTCTTTGTGATCTCACCATAGTGCCTCTCACCTACCCGACAA------------------TCTTGATCCCCAAGGGCACAGCAGGGG-CTCAGT--------atgaatgaatgaatgaatgaaCCAACAAACG------------TGCACCTGCACCTGCCTCCCTAGGGCTGTGAGTGGCACAAGGACAGCTCTGGTTCACCTCACACCTCCAGCACCT-GGTCAGGTCTGAGATCACGTCTGCTAAATAAATGAGGTCCCACAACTCCCCCGTTCCTTGTTCATTTCCTGAGTACCTGTTTACTGAGCGGGGCACATTGACTCTGAACAAGAAAGCTTTGGCCCTTT-CAGTGCCAGACTAGAAAAGAAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919166 347 + 60714840 aaatgtt-cattCACCTCTGAGACTCTGAGGCATTGC---------------------------------CCTCTCACCTACTCCACAACAGTGCCG----GCTCTTTCTTGATCCCCAAGGGCACAGCAGGGG-CTCAAT------------ATGAATGAATGAATGAACC--------------------TGCACCTGCACCTGCCTCCCTATGGCTGTGAGTGGCACAAGGACAGCTCTGGTTCATCTCACACCTCCAGCACCC-GGTCAGGTCTGAGATCACATCTGCTAAATAAATGAGGCCCCACAACTCCCATTTTCCTTGTTCATTTCCTGAGTACGCTTCTACTGAGCAGGGCACATTGACCCTTAACAAGAAAGCTTTGGCCCTTT-CAGTGCCAGACTAGAAAAGAAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103390166 407 - 106955855 aaatgTT-CATCCACCTCTGAGA--CTGAGGCATTGCCCTCTCACTGTTCTTTGTGATCTCACCATAGTGCCTCTCACCT---CCACAACAGCGCCG----GCTCTTTCTTGATCCCCAAGGGCACAGCAGGGG-CTCAATatgaatgaatgaatgaatgaatgaatgaacgaacgaatgaaCGAACAAACCTACACCTGCACCTGCCTCCCTATGGCTGTGAGTGGCACAAGGACAGCTCTGGTTCATCTCACACCTCCAGCACCT-GGTCAGGTCTGAGATCACGTCTGCTAAATAAATGAGGTCCCACAACTCCCTCTTTCCTTGTTCATTTCCTGAGTACCCATTTACTGAGCGGGGCACATTGACTCTGAACAAGAAAGCTTTGGCCCCTT-CAGTGCCAGACTAGAAAAGAAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60692418 396 + 64156825 aaatatt-catCCACCTCTGAGACTCTGAGGC--TGT--TCTCACTGTTCTTTGTGATCTCACCATAGCGCCTCTCACCTACTCCACAACAGCGCCA----GCTCTTTCTTGATCCCCAAGGGCACAGCAGGGG-CTCAAT------------atgaatgaatgaatgaatgaatgaatgaatgagcgaatCTGCACCTGCACCTGCCTCCCTATGGCTATGAGTGGCACAAGGACAGCTCTGGTTCACCTCACACCTCCAGCACCT-GGTCAGGTCTCAGATCGCCTTTACTAAATAAATGAGGTCCCACAACTCCCCCTTTCCTTGTTCATTTCCTGAGTACCCGTTAACTGAGTGGGGCACATTGACTCCGAACAAGAAAGCTTTGGCCCTTT-CAGTGCCAGACTAGAAAACAAAC i rheMac3.chr19 C 0 I 37 s macFas5.chr19 55830264 404 + 59248254 aaatatt-catCCACCTCTGAGACTCTGAGGC--TGT--TCTCACTGTCCTTTGTGATCTCACCATAGCGCCTCTCACCTACTCCACAACAGCGCCA----GCTCTTTCTTGATCCCCAAGGGCACAGCAGGGG-CTCAAT----atgaatgaatgaatgaatgaatgaatgaatgaatgaatgaGCGAATCTGCACCTGCACCTGCCTCCCTATGGCTATGAGTGGCACGAGGACAGCTCTGGTTCACCTCACACCTCCAGCACCT-GGTCAGGTCTCAGATTGCCTTTACTAAATAAATGAGGTCCCACAACTCCCCCTTTCCTTGTTCATTTCCTGAGTACCCGTTAACTGAGTGGGGCACATTGACTCCGAACAAGAAAGCTTTGGCCCTTT-CAGTGCCAGACTAGAAAACAAAC i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 57049 356 + 138250 aaaCGTTACACCCACCT--------CTAAGGCATCACCCTCTCCCTGTTCTTTGTGATCTTACCACAGCGCCTCTCGCCTACTCCACAACATCCACAGTGCGCTCCCTCTTAATCCCCAAGGGCACAGGAGGGGACTCAAC------------ACGTGTGAATGAGTGA------------------------GCGCCTGCgcctgcctccctacagctgtgagtggcacgaggacagctttagttcatctcacacctccagcacctgggtcaggtctcagatcacgtttgctaaataaatgaGGTCCCACAACACCC-CATTCTTCGTCCACTT---------------ACTGAGCAGGGCACATCGACTCTGACCAAGAAAGCTTTGGCCCTTTCCAGTGCCAGACAAGGAAAC---- i calJac3.chr22_GL285922_random I 218 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e chlSab2.chr6 47642763 19 + 50890351 I e papAnu2.chr19 47942082 2539 + 51301725 M a score=8955.000000 s hg38.chr19_GL949747v2_alt 699510 9 + 729520 AAAGCAgct s panTro4.chr19 59966902 9 + 63644993 AAAGCAgct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919513 9 + 60714840 AAAGCagct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103390573 9 - 106955855 AAAGCAgct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55830668 9 + 59248254 AAAGTAgcc i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 57405 9 + 138250 AAAGGGGTC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e chlSab2.chr6 47642763 19 + 50890351 I e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60692814 37 + 64156825 I a score=53888.000000 s hg38.chr19_GL949747v2_alt 699519 38 + 729520 gggcatggtggctcatgcctgtaatcccagcactttgg s panTro4.chr19 59966911 38 + 63644993 gggcatggtggctcatgcctgtaatcccagcactttgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919522 38 + 60714840 gggcgcggtggctcacgcctgtaatcccagcactttgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103390582 38 - 106955855 gggcgtggtggctcacgcctgtaatcccagcactttgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55830677 38 + 59248254 gggcgcggtggctcacacctgtaatcccagcactttgt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47642782 38 + 50890351 gggcacagtggctcacacctgtaatcccagcactttgg i chlSab2.chr6 I 19 C 0 s calJac3.chr22_GL285922_random 57414 25 + 138250 GGGCACGGT-GCTCATGCCTATAATC------------ i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60692814 37 + 64156825 I a score=227546.000000 s hg38.chr19_GL949747v2_alt 699557 118 + 729520 gaggctgaggcaggcggatcacaaggtcaggaattcgagaccagcctggccaacatagtgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggcacccgcctata s panTro4.chr19 59966949 118 + 63644993 gaggctgaggcaggcggatcacaaggtcaggaattcgagaccagcctggccaacatagtgaaaccccgtctctattaaaaatacaaaaattagccgggcatggtggcacacgcctata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919560 118 + 60714840 gaggctgaggcgggcggatcacaaggtcaggaatacgagaccagcctggccaacatagtgaaaccccatctctactaaaaatacaaaaattagccgggcgtggtggcgcacacctata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103390620 118 - 106955855 gaggctgaggcggacagatcacaaggtcaggagttccagaccagcctgaccaacatagtgaaaccccatctctactaaaaatataaaaattagctgggcatggtggcacacacctata i nomLeu3.chr10 C 0 M 2381 s rheMac3.chr19 60692851 118 + 64156825 ACgactgaggcagggggatcacaaggtcaggagttcaagaccagcctggccaacacagtgaaaccccgtctctactgaaaatacaaaaatgagccagccatggtggcacacgcctata i rheMac3.chr19 I 37 C 0 s macFas5.chr19 55830715 118 + 59248254 gaggccgaggcagggggatcacaaggtcaggagttcaagaccagcctggccaacatagtgaaaccccatctctactaaaaatacaaaaatgagccagccatggtggcacacgcctata i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47642820 118 + 50890351 gaggctgaggcgtggggatcacaaggtcaggagttcaagaccagcctggccaacatagtgaaaccccatctctactaaaaatacagaaatgagccagccatggtggcacacacctata i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 57439 79 + 138250 --------------------------------------gaccagcctggccaaaacagcaaaa-cccatctctactaaaaacacaaaaatcagctgcgcgtggtggtgggcgcctgtg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e papAnu2.chr19 47942082 2539 + 51301725 M a score=92130.000000 s hg38.chr19_GL949747v2_alt 699675 56 + 729520 --------gtcttgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggctgcagt s panTro4.chr19 59967067 56 + 63644993 --------gtcttgggaggctgaggcaggagaatcgcttgaacccaggaggcagaggctgcagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919678 56 + 60714840 --------gtcttgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60692969 56 + 64156825 --------gtctcgggaggctgaaggaggagaatcgcttgaacccaggaggcggaggttgcagt i rheMac3.chr19 C 0 M 558 s macFas5.chr19 55830833 56 + 59248254 --------gtctcgggaggctgaaggaggagaatcacttgaacccaggaggcggaggttgcagt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47642938 56 + 50890351 --------gtctcgggaggcttaggtaggagaatcgcttgaacccaggaggcggaggttgcagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 57518 64 + 138250 agcccagctactcggaaggctgaggcaggagaattgctcaaactcaagaggtggacgctgcggt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M a score=65810.000000 s hg38.chr19_GL949747v2_alt 699731 65 + 729520 gagccaagatcgcatcattgcactccagcctgggtgacag-agcaagactccatctc-------------aaaaaaa----------------ag s panTro4.chr19 59967123 65 + 63644993 gagccaagatcgcatcattgcactccagcctgggtgacag-agcaagactccatctc-------------aaaaaaa----------------ag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919734 65 + 60714840 gagccaagattgcgtcactgcactctagcctgggtgacag-agcaagactccatctc-------------aaaaaaa----------------ag i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55830889 81 + 59248254 gagccgagatagtgtcactgcactccagcctgggtgacag-agcaagactccatctc-------------aaaaaaaaaaTTGGTAAgaggccag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47642994 94 + 50890351 gagccaagatctcgtcactgcactatagcctgggtgacag-agcaagactccatctcaaaaaaaaaaaaaaaaaaaaaaaTTGCTAAgaggccag i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 57582 66 + 138250 gagcagagatcacgccactgcactccagcctggacagcagcagcaaaactccatctc-------------aaaaata----------------aa i calJac3.chr22_GL285922_random C 0 I 66 e canFam3.chr1 20132918 2038 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693025 558 + 64156825 M a score=115958.000000 s hg38.chr19_GL949747v2_alt 699796 147 + 729520 gtcttgctctgtcatccaggttagagtgcagtggcacaaatacggctcactgcagccttgaactctcgggctcaagtgatcctcttgcctcagcctcctgagtagctgggactgtaggcacatgccaggatgcccggctaatttttt s panTro4.chr19 59967188 134 + 63644993 gtcttgctctgtcatccaggttagagtgcagtggcacaaacacggctcactgcagccttgaactcccgggctcaagtgatcctcttgcctcagcctcctgagtagctgggactgt-----------aggatgcccggctaa--tttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919799 147 + 60714840 gtcttgctctgtcatccaggttagagtgcagtggcacaaacacggctcactgcagccttgaactcccgggctcaagtgatcctcctgcctcggcttcatgagtagctgggactataggcacaggccaggatgcccggctaatttttt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55830970 147 + 59248254 gtcttgctctgtagtccaggttagtgtgcagtggcacaaacacggttcactgcagccttgaactcctgggctcaagcaatcctcctgcctcagcctcctgagtagctggggctataggcacacgccaggatgcccggctaatttttt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47643088 147 + 50890351 gtcttgctctgtcgtccaggctagagtgcagtggtgcaaacacggctccctgcagccttgaactcccaggctcaagcgatcctctggcctcagcctcctgagtagctggggctataggcacacgctaggatgcccagctaatttttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 57648 66 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693025 558 + 64156825 M a score=10920.000000 s hg38.chr19_GL949747v2_alt 699943 8 + 729520 tttttttt s panTro4.chr19 59967322 8 + 63644993 tttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919946 8 + 60714840 tttttttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60693583 8 + 64156825 TTTttttt i rheMac3.chr19 M 558 C 0 s macFas5.chr19 55831117 8 + 59248254 tttttttt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47643235 8 + 50890351 tttttttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 57648 66 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M a score=278341.000000 s hg38.chr19_GL949747v2_alt 699951 354 + 729520 t----aatctttggtacacacaaggtctcactatgcttcctaggctggtctc-taactcctgagctcaagcaatcctaagagaagagattttaaatgtggtcaccacaaaaacagg-----taagtatttgaggtaatgcatatgttaattagcttgatttagccattctacaatgtatacaatgtacatcatgctgtacataatatatacaagtatacatgtcaactaaacaataaaTAATTTTAGTGTATTCTTGAGTCTATTTAAAGATGAACAAGAATAGAAAAGCTAGAGGATGGTCCCAGTTTTACATAAAAATATATAAAT--ACACACACAAACCTATTATAAACAAGACTAGAAAG--A s panTro4.chr19 59967330 353 + 63644993 t----aatctttggtacacacaaggtctcactatgcttcctaggctggtctc-taactcctaagctcaagcaatcctaagagaagagattttaaatgtggtcaccacaaaaaca-g-----taagtatttgaggtaatgcatatgttaattagcttgatttagccgttctacaatgtatacaatgtacatcatgctgtacataatatatacaagtatacatgtcaactaaacaataaaTAATTTTAGTGTATTCTTGAGTCTATTTAAAGATGAACAAGAATAGAAAAGCTAGAGGATGGTCCCAGTTTTACATAAAAATATATAAAT--ACACACACAAACCTATTAGAAACAAGACTAGGAAG--A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919954 348 + 60714840 ttttaaatgtttggtactcacaaggtctcactatgcttcctaggctggtctcttaactcctgagctcaagcaaACctaagagaagagattttaaatgtggtcaccacaaaaacagg-----taagtatctgaggtaatgcatatgttaattagcttgattgagccactctacaatgtatacaatgtacatcatgttgtacataatatatacaagtgtacatgtcaactaaacaaTCAATAATTTTAATGTATTCTTGAGTCTATTTAAAGATGACCAAGAATAGAAAAGCtagaggatggtcccaattttacataaaaatatataaat--acacacac-------------acaagactggaaagaaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60693591 361 + 64156825 t----aatctttggtacacacaaggtctcactatgcctcctacgctggtctc-taactcctgagctcaagcaatcctaagagaagagattgtaaatgtagtcaccacaaaaacaggtaatataagtatttgaggtaatgcatatgttaattagcttgatttagtaattctacaatgtatacaatgtacatcatgttgtacgtaatatatacaagtgtacctgtcaactaaacaataaaTAATTTTAATGTATTCTTGAGTCTATTTAAAGATGAACAAGAATAGAAAAGCTAGAGTATGGTCCCAGTTTTACATGAAAATATATAAATTCACACACACAAACCAATTAGAAACAAGACTGGAAAG--A i rheMac3.chr19 C 0 M 2020 s chlSab2.chr6 47643243 347 + 50890351 -----aatctttggtacacacaaggtctcactatgcttcctacactggtctc-taactcctgagctcatgcaatcctaagagaagagattgtaaatgtggtccccacaaaaacagg-----taagaatttgatgtaatgcatatgttaattagcttgatttagtaattctacagtgtatacaatgtacatcatgttgtacgt----tatacaagtgtacatgtcaactaaac----aataaTTTTAATGTATTCTTGAGTCTATTTAAAGATGAACAAGAATAGAAAAGCTGGagtatggtcccagttttacataaaaatatataaattcacacacacaaaccaattagaaacaagactggaaag--a i chlSab2.chr6 C 0 I 2 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 57648 66 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e macFas5.chr19 55831125 0 + 59248254 C a score=28204.000000 s hg38.chr19_GL949747v2_alt 700305 58 + 729520 TCCA---------TAAAAGTGATTCTCCTGGGGCTGGTGCAGATCAAAGttgtttagttctgtcttc s panTro4.chr19 59967683 58 + 63644993 TCCA---------TAAAACTGATTCTCCTGGGGCTGGTGCAGATCAAAGGTGTTTAGttctgtcttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56920302 58 + 60714840 tcca---------taaaagtgattctcctggggttggtgcagatcaaaggtgtttAGttctgtcttc i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47643592 67 + 50890351 tccatcaaaactttaacagtgattctcctggggttggtgcagatcaaaggtgtttagttctgtcttt i chlSab2.chr6 I 2 I 2 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 57648 66 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e macFas5.chr19 55831125 0 + 59248254 C e rheMac3.chr19 60693952 2020 + 64156825 M a score=141911.000000 s hg38.chr19_GL949747v2_alt 700363 188 + 729520 ttttttattgagacagagtctcactctgtcacccaggctggagtgcactggcacaatctcagctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagcaccctgagtagctgagattacaggtgtgcaccaccacgcctggctaa-tttttgta-tttttagtagagacagggtttc s panTro4.chr19 59967741 188 + 63644993 ttttttattgagacagagtctcactctgtcacccaggctggagtgcactggcacaatctcagctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagcaccctgagtagctgagattacaggtgtgcatcaccacgcctggctat-tttttgta-tttttagtagagacagggtttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56920360 188 + 60714840 ttttttattgagacagagtctcactctgtcacccaggctaaaatgcagtggcacagtctcagctcaccgcaacctccgcctcccgggttcaagcaattctcctgcctcagcaccctgagtagctgggattacaggcgtgcaccaccatgcctggctaa-tttttgta-tttttagtagagacagggtttc i ponAbe2.chr19 C 0 M 668 s macFas5.chr19 55831125 190 + 59248254 tttttttttgagactgagtcttgctctgtcacccaggctagagtgcagtggccagatctcagctcactgcaagctccgcctcccgggtttacgccattctcctgcctcagcctctcgagtagctgggactacaggcgcccgccacctcgcccggctagttttttgtattttttagtagagacggagtttc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47643661 188 + 50890351 cttttttttgagacgaagtcttgctctgtcacctaggctggaatgcagtggtgtgatctcagctcactgcaacctccgcctcccggcttcatgccattctcctgcctcagcctcccaagcaggtgggattacaggtgtgcaccaccacacccggctaa-tttttgta-tttttagtagaaacagggtttc i chlSab2.chr6 I 2 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 57648 66 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693952 2020 + 64156825 M a score=8283.000000 s hg38.chr19_GL949747v2_alt 700551 15 + 729520 accatgttggccagg s panTro4.chr19 59967929 15 + 63644993 accatgttggccagg i panTro4.chr19 C 0 C 0 s macFas5.chr19 55831315 15 + 59248254 accatgttagccagg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47643849 15 + 50890351 accatgttggccagg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56920548 668 + 60714840 M e calJac3.chr22_GL285922_random 57648 66 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693952 2020 + 64156825 M a score=226360.000000 s hg38.chr19_GL949747v2_alt 700566 310 + 729520 ctggtctcgaactcctgacctcaagggatccacctgcctcagcctcccaaagtgctgggattaacaggcgtgagccactgtgcccagccAGTTCTGTCTTCTTTACATTGCAGTATTTTATAAATGTCCCATAACAAACACATATTTCTTTAACCATGGTGGGGAAGGCACTTGATCAATAAATGCTTAATAAggtcaggtgcggtggctcacgcctgtaatcccagcactgtgggaagctgacctgggtggatcacttgagccc----------------------------------------------------------------------aggagttggagaccagcctgagcaacatggtgaaaccccagctct s panTro4.chr19 59967944 379 + 63644993 ctggtctccaactcctgagctcaagtgatccacccaggtcggcttcccaaagtgctgggatt-acaggtgtgagccaccgtgcccagccAGTTCTGTCTTCTTTACACTGCAGTATTTTATAAATGTCCCATAACAAACACATATTTCTTTAACCATGGTGGGGAAGGCACTTGATCAATAAATGCTTAATAAggtcaggtgcggtggctcacgcctgtaatcccagcactgtgggaagccgacctgggtggatcacttgagcccaggagttggagacaagcctgagcaacatggtgaaaccccagctctaaaaacaaaacaaaannnnnnnnnnaggagttggagacaagcctgagcaacatggtgaaaccccagctct i panTro4.chr19 C 0 C 0 s macFas5.chr19 55831330 309 + 59248254 ctggtctcgaactcctgacctcaagtgatccacccgcctcagcctcccaaagtgctgggatt-acaggcatgagccactgcgcctggccagttctgtcttctttACACTGCAGTATTTTATAAATGTCCCATAACTAACACATATTTATTTAACCATGGTGGGGAAGGTACTTGATCAATAAATGCTTAATAAggccgggcacagtggctcaagcctgtaatcccagcactgtgggaagccaaggcaggtggatcacttgagccc----------------------------------------------------------------------aggagtttgaaaccagcctgagcaacatggtgaaaccccagctct i macFas5.chr19 C 0 I 190 s chlSab2.chr6 47643864 309 + 50890351 ctggtctcgaactcctgacctcaagtgatccacccgcctcagcctcccaaagtgctgggatt-acaggcatgagccaccgcacccagccagttctgtcttctttacactgcaatattttataaatgtcccataactaacacatattTATTTAACCATGGTGGGTAAGGTACTTGATCAATAAATGCTTAATAAggccgggcgcagtggctgaagcctgtaatcccagcactgtgggaggccaaggcgggtggatcacttgagccc----------------------------------------------------------------------aggagtttgaaaccagcctgagcaacatgatgaaacaccagctct i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 57714 295 + 138250 ctggtactgaactcctgacctcgagggatccaaccacctcagcctcccaaaatgctggcatt-acaagcgtgagccactgcgcccaaccAGTCCTGTCGTCTTTGCACTGCAGTATTTTATAAATGCCCCATAACAGACACTTATTTCTTTAACCATGGTGGGGAAGACACTGGATCCATAAGCACTTAATAAggccgggcgcggtggctcaagcctgtaatcccagcaatttg-------------ggtggatcagttgagccc----------------------------------------------------------------------aggagtttgagaccagcctgagcaacatagtgaaac-ccaactct i calJac3.chr22_GL285922_random I 66 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56920548 668 + 60714840 M e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693952 2020 + 64156825 M a score=910.000000 s hg38.chr19_GL949747v2_alt 700876 1 + 729520 a s panTro4.chr19 59968323 1 + 63644993 a i panTro4.chr19 C 0 C 0 s macFas5.chr19 55831829 1 + 59248254 a i macFas5.chr19 I 190 C 0 s chlSab2.chr6 47644173 1 + 50890351 a i chlSab2.chr6 C 0 I 982 s calJac3.chr22_GL285922_random 58009 1 + 138250 a i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56920548 668 + 60714840 M e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693952 2020 + 64156825 M a score=1526.000000 s hg38.chr19_GL949747v2_alt 700877 15 + 729520 -aaaacaaaacaaaac s panTro4.chr19 59968324 15 + 63644993 -aaaacaaaacaaaac i panTro4.chr19 C 0 C 0 s macFas5.chr19 55831830 14 + 59248254 -aaaaaaaaaaaaag- i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 58010 11 + 138250 caaaaaaaatt----- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56920548 668 + 60714840 M e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47644174 982 + 50890351 I e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693952 2020 + 64156825 M a score=52397.000000 s hg38.chr19_GL949747v2_alt 700892 116 + 729520 ---aataaaacaataatta--gctgtgtgtggtggcgtatgcctgtactcccagctacttgggaggctgaagtgggaggatcccttgagcccagcaggttgagactgcagtgagccatgac s panTro4.chr19 59968339 116 + 63644993 ---aataaaacaataatta--gctgtgtgtggtggcgtatgcctgtactcccagctacttgggaggctgaagtgggaggatcccttgagcccagcaggttgagactgcactgagccatgac i panTro4.chr19 C 0 I 162 s macFas5.chr19 55831844 109 + 59248254 ---aaaaaatta---------gccagatgcggtggtgtgcttccatagccccagctactcaggagtctgaggcaggaggatcacttgagcccaagaggtcaaggctgcagggagctgtgtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47944674 101 + 51301725 ---aacaaactaattattcaggccgggcgtggtggctcacgcctgtaatcccagcactttgagaggcagaggcaggaggatcacttgaggtcaggagttcgaga----------------- i papAnu2.chr19 M 2539 C 0 s calJac3.chr22_GL285922_random 58021 112 + 138250 tttttaaaatta---------gctgtgtgtggtggcataagcctgtacacccagctacttgggaggctgaactgggaggatcacttgagcccagcaggttgagactgcagtgagccctgac i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56920548 668 + 60714840 M e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47644174 982 + 50890351 I e rheMac3.chr19 60693952 2020 + 64156825 M a score=124886.000000 s hg38.chr19_GL949747v2_alt 701008 319 + 729520 tgcaccactgca-ctctagcctgggtgaca----gagatggatcctgtctc--aaac-aaaCTAATTATTCAGGTAgggcacggtggctcacacctgtaatcccagcactttgggaggccaagggaagcagatcacctgaggtcaggagttcgagac-------------------------------cagcctgaccaacatggtgaaaccctgtctctacct------------aaaacacaaaaaatt--agccaggcacggtggcgggtgcctgtaatcccagctactca--------ggaggctgaagcaggagaatcatttgaaatcgggagacggaggttgcagtgaggcaagatcacaccactgcactccag s panTro4.chr19 59968617 315 + 63644993 tgcaccactgca-ctctagcctgggtgaca----gagatggatcctgtctc--aaac-aaa----TTATTCAggcagggcgtggtggctcacacctgtaatcccagcactttgggaggccgagggaagcagatcacttgaggtcaggagttcgagac-------------------------------cagcctgaccaacatggtgaaaccctgtctctacct------------aaaacacaaaaaatt--agccaggcacggtggcgggtgcctgtaatcccagctactca--------ggaggctgaagcaggagaatcatttgaaatcgggagacggaggttgcagtgaggcaagatcacaccactgcactccag i panTro4.chr19 I 162 C 0 s macFas5.chr19 55831953 315 + 59248254 tgtgccactgca-ctccagcctgggtgaca----gagacagaccctgtctc--aaaC-TAACTAATTATTCAggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggcagaggcaggaggatcacttgaggtcaggagttcgagat-------------------------------cagcctgaccaatgtggtgaaacc--gtctctacct--------------aaaacaaaaaatt--agccaggcatggtggcaggtgcctgtaatcccagctactca--------gggggctgaggcaggagaatcatttgaaaccaggagatggaggttgcagtgaggcaagatcacaccacagcactccag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47944775 305 + 51301725 ---------------ccagcctgaccaacatggtgaaactgtctctatcta--aaacacaaaaaatta-----gccaggcatggtggcgggtgcctgtaatcccagctactcaggaggctgaggcaggagaatcatttgaaaccaGGAGATGGCGGTTGCAGtga----------caccatggcactccagcctgggcaacacagcgagact--tcgtctgtctcaaaacaaacaaacaaaacataaagtc--agcggggtgcagtggctcacgcctgtaatcccagcactttg--------ggaggctaaggcagatggatcacctgaggtcaggagttcgaga-------------------------------ccag i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 58133 315 + 138250 --------tgcacctccagcctgggtgaca----gagcaagaccctgtctcaaaaac-aaaaaaTtta-----gccaggttcggtggcttctatctatagccccagctactcaggaggctgaggcaggaggatcgcttgagcccaggagatcaaggctgcagggagctgtgtctgtgccactgcactctagcctgggtgacagagacagacc------ctgcct----------caaaaaaaCTAATTATTCAgaccgggtatggtggttcatgcctgaaatcccagcacttcagcactttgggaggccaaggcaggaggaccacctgaggtcaggaatttgaga-------------------------------gtag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56920548 668 + 60714840 M e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47644174 982 + 50890351 I e rheMac3.chr19 60693952 2020 + 64156825 M a score=143688.000000 s hg38.chr19_GL949747v2_alt 701327 184 + 729520 cctgggcaacagagcgagaccccatctgt-ctcaaaacaaacaaacaaaac--aaaGTCAgccgggcgcagtggcccacgcctgtaatcccagcactctgggaggctgaggcaggagaatcacctgaggtcaggagttccaga-------------------------------ccagcctggccaacgtggtgaaaccccgtctctactaaaa---atac s panTro4.chr19 59968932 184 + 63644993 cctgggcaacagagcgagaccccatctgt-ctcaaaacaaacaaacaaaac--aaaGTCAgccgggcgcagtggcccatgcctgtaatcccagcactttgggaggttgcggcaggtgaatcacctgaggtcaggagttccaga-------------------------------ccagcctggccaacgtggtgaaaccctgtctctactaaaa---atac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921218 186 + 60714840 CCTGGGCAACAGAGCAAGACTCCGTCTGT-CTCAAAACAAACAAACaaaacataaagtcagccgggcacagtggctcatgcctgtaatctcagcactttgggaagccgaggcaggtggatcacctgaggtcaggagttccaga-------------------------------ccagcctggccaacatggtgaaaccccgtctctactaaaa---atac i ponAbe2.chr19 M 668 C 0 s macFas5.chr19 55832268 185 + 59248254 cctgggcaacacagcgagacttcatctgt-ctcaaaacaaacaaacaaaacataaaGTCAgcggggtgcagtggctcacgcctgtaatcccagcactttggaaggctgaggcagatggatcacctgaagtcaggagtttgaga-------------------------------ccagcgtggctaacgtggtgaaaccccgtctctactaaaa---ata- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47945080 175 + 51301725 cgtggctaacgtggtgaaaccccgtctctactaaaaataaa------------aaatttggccaggcgcagtggctcaagcctgtaatcccagcactttgggaggccgagacgggtggatgac--aaggtcaggagatagaga-------------------------------ccatcctggctaacccggtgaaaccccgtctctactaaaaaataca- i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 58448 195 + 138250 cctgaacaacgtggagaaaccccatctctactaaaaatacaa-----------gaaattagctaggtgtggtggcacataactgtagtcccagctactcggaaggctgaggcaggagaatcacttgaacccaggaggcagaggttgcagtgagctgagatcatgccattgcactccagcctgggcaacagaacaagattccgtctc--------------- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47644174 982 + 50890351 I e rheMac3.chr19 60693952 2020 + 64156825 M a score=112592.000000 s hg38.chr19_GL949747v2_alt 701511 116 + 729520 aaaaattagcagggtatggtagcaggcatct-taatcccagctactcaggaggctgaggtccg-----cgcttgaacccaggaggcagaggttacagtgagccgagatcgcgccattgcact s panTro4.chr19 59969116 89 + 63644993 aaaaattagcagggtatggtagcaggcatct-taatcccagctactcaggaggc--------------------------------agaggttacagtgagccgagattgcgccattgcact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921404 116 + 60714840 aaaaattagcagggtatggtagcaggcatct-taatcccagttactcaggaggctcaggtccg-----tgcttgaacccaggaggcagaggttacagtgagccgagatggcgccgttgcact i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55832453 111 + 59248254 aaaaattagcagggtgtggtggcgggcacct-taatcccagctactcaggaggctgtg----------cgcttgaacccgggaggcagaggttccagtgagccgagatcgtgccgttgcact i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47945255 122 + 51301725 aaaaactagcccggcaaggtggcgggcgcctgtagtcccagctactcgggaggctgaggcagaagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcacgccactgcact i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47645156 111 + 50890351 aaaaattagcagggtgtggtcacaggcacct-taatcccagctactcaggaggctgtg----------cgcttgaacccaggaggcagaggttccagtgagccaagatcgtgccgttgcact i chlSab2.chr6 I 982 I 1 s calJac3.chr22_GL285922_random 58643 92 + 138250 -aaaaaTAgctgggcgcggtggctcatgcctgtaatcctagcactttgggaggccgagg---------tgggtggatc-----agcagaggt--caggagttcaagacc------------- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e rheMac3.chr19 60693952 2020 + 64156825 M a score=420257.000000 s hg38.chr19_GL949747v2_alt 701627 197 + 729520 cagcctggccgacagagtgagactccctctc-aaaat----------------aacagta-gtaataaat--------aaataaaGtcgttgcttgcaggctgtac-aaaaaaaggcagcaactggacttggcccctaactcatagtttgccaaAACTCTGCTCTAAAGTTTGCTTGCTTCATTCACTTCTCAGAGCCTGGCCCTGGGAGCCGCCTATCCCAGT s panTro4.chr19 59969205 197 + 63644993 cagcatggctgacagagtgagactccctctc-aaaat----------------aatagta-gtaataaat--------aaataaaGtcgttgcttgcaggctgtac-aaaaaaaggcagcaactggacttggcccctaactcatagtttgccaaAACTCTGCTCTAAAGTTTGCTTGCTTCATTCACTTCTCAGAGCCTGGCCCTGGGAGCCGCCTATCCCAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921520 201 + 60714840 cagcctggccaacagagtgagactccctctc-aaaat----------------aataata-gtaataaat----taacaaataaagtcattgcttgcaggctgtac-aaaaaaaggcagcaactggatttggcccctaactcatagtttgccaaAACTCTGCTCTAAAGTTTGCTTGCTTCATTCACTTCTCAGAGCCTGGCCCTGGGAGCCGCCTATCCCAGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60696027 205 + 64156825 cagcctggccgacagagtgagactctgtctc-aaaaa----------------aataata-ataataaaCAAATGAATAAAtaaagtcattgcttgcaggctgtac-aaaaaaaggcagcagctggatttggcccctagcccatggtttgccaaAACTCTGCTCTAAAGTTTGCTTGCTTCATTCACTCCTCAGAGCCTAGCCCTGGGAGCCGCCTCTCCCAGT i rheMac3.chr19 M 2020 C 0 s macFas5.chr19 55832565 205 + 59248254 cagcctggccgacagagtgagactctgtctc-aaaaa----------------aataata-ataataaacaaatgaataaataaagtcattgcttgcaggctgtac-aaaaaaaggcagcagctggatttggcccctagcccatggtttgccaaAACTCTGCTCTAAAGTTTGCTTGCTTCATTCACTCCTCAGAGCCTAGCCCTGGGAGCCGCCTCTGCCAGT i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47945378 204 + 51301725 cagcctggccgacagagtgagactctgtctc--aaaa----------------aataata-ataataaataaatgaataaataaagtcattgcttgcaggctgtac-aaaaaaaggcagcagctgGATTTGGCCCCTAGCCCATGGTTTGCCAAAACTCTGCTCTGAAGTTTGCTTGCTCCATTCACTCCTCAGAGCCTGGCCCTGGGAGCCGCCTCTGCCAGT i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47645268 221 + 50890351 cagcctggccgacagagcgagactctgcctc-aaaaaaataaataataataataataata-ataaaaaataaatgaataaAtaaagtcattgcttgcaggctgtac-aaaaaaaggcagcagctggatttggcccctagcccatggtttgccaaAACTCTGCTCTAAAGTTTGCTTGCTCCATTCACTCCTCAGAGCCTGGCCCTGGGAGCCGCCTCTCCCAGT i chlSab2.chr6 I 1 C 0 s calJac3.chr22_GL285922_random 58735 205 + 138250 -agcctggccatcatggtgaaaccccatctttaaaaa----------------aaaAATACATAATAAATAaa-aaatgaaaatagtcatagcttgcaggctgtacaaaaaaaaggcagccactggatttggcccctgggccacagttcaccaaAACTAAGCTCTAAAGCTTACTCGGTTCATTCACTCCTCAGAGCCTGCCCCCGGGAGCCGCCCAT-CCAGA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M a score=257111.000000 s hg38.chr19_GL949747v2_alt 701824 88 + 729520 CCTCATCCCACATGGCCAGCGTT----CTCCTACCTTCAATGATCTTTGCTGCAAACTCTCGGATAGACTTGAGGGAAGCCAAGTCCAGGTG s panTro4.chr19 59969402 88 + 63644993 CCTCATCCCACATGGCCAGCGTT----CTCCTACCTTCAATGATCTTTGCTGCAAACTCTCGGATAGACTTGAGGGAAGCCAAGTCCAGGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921721 91 + 60714840 CCTCATCCCCCATGGCCAGCGTTCT-CCTCCTACCTTCAATGATCTTTGCTGCAAACTCTCGGATGGACTGGAGGGAAGCCAAGTCCAGGTG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60696232 91 + 64156825 CCTCATCCCACACAGCCAGCGTTCT-CCTCCTACCTTCAATGATCTTCGCTGCAAACTCTCGGATGGACTTGAGGGAAGCCAAGTCCAGGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55832770 91 + 59248254 CCTCATCCCACACGGCCAGCGTTCT-CCTCCTACCTTCAATGATCTTCGCTGCAAACTCTCGGATGGACTTGAGGGAAGCCAAGTCCAGGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47945582 92 + 51301725 CCTCATCCCACACGGCCAGCATTCTCCCTCCTACCTTCAATGATCTTCGCTGCAAACTCTCGGATGGACTTGAGGGAAGCCAAGTCCAGGTG i papAnu2.chr19 C 0 I 226 s chlSab2.chr6 47645489 91 + 50890351 CCTCATCCTACACCGCCAGCGTTCT-CCTCCTACCTTCAATGATCTTCGCTGCAAACTCTCGGATGGACTTGAGGGAAGCCAAGTCCAGGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 58940 88 + 138250 CCTCATCGCACAAGGCCAATGTT----CTCCTACCTTCACTGATCTTCGCTGCAAACTCCCTGATGGACTTGAGGGAGGCCAGGTCCAGGTG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20134956 92 - 122678785 CCTCGCCCCACAAGGCCAGCATCCTCCCGCCTACCTTCAATGATCTTCGCTGCAAACTCTCGGATGGACTTGAGAGAGGCCAAGTCCAGGTG i canFam3.chr1 I 2038 C 0 e nomLeu3.chr10 103390738 2381 - 106955855 M a score=423390.000000 s hg38.chr19_GL949747v2_alt 701912 140 + 729520 CCGGGCGTTGACATGGTGATTGAGGGTCTCCCCGCGGATGTCCTTTGCTGCCGCCTCACACTTCTCCATGTCTCGGCAGGCcaggatgatgttgcctcctgaaaacccaggatggaaaaagatttaaattaataatccac s panTro4.chr19 59969490 140 + 63644993 CCGGGCGTTGACATGGTGATTGAGGGTCTCCCCGCGGATGTCCTTTGCTGCCGCCTCACACTTCTCCATGTCTCGGCAGGCCAGGATGATGTTGCCtcctgaaaacccaggatggaaaaagatttaaattaataatccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921812 140 + 60714840 CCGGGCGTTGACGTGGTGATTGAGGGTCTCCCCGCGGATGTCCTTTGCCGCCGCCTCACACTTCTCCATGTCTCGGCAGGCcaggatgatgttgcctcctgaaaacccaggatggaaaaagatttaaattaataatccac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60696323 140 + 64156825 CCGGGCATTGACGTGGTGATTGAGAGTCTCCCCGCGGATGTCCTTTGCTGCCGCCTCACACTTCTCCATGTCTCGGCAGGCCAGGATGATGTTGCCTCCTGAAAACCCAGGATGGAAAAAGATTTAAATTAATAATCCAC i rheMac3.chr19 C 0 I 3813 s macFas5.chr19 55832861 140 + 59248254 CCGGGCATTGACGTGGTGATTGAGAGTCTCCCCGCGGATGTCCTTTGCTGCCGCCTCACACTTCTCCATGTCTCGGCAGGCCAGGATGATGTTGCCTCCTGAAAACCCAGGATGGAAAAAGATTTAAATTAataatccac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47945900 140 + 51301725 CCGGGCGTTGACGTGGTGATTGAGAGTCTCCCCGCGGATGTCCTTTGCCGCCGCCTCACACTTCTCCATGTCTCGGCAGGCCAGGATGATGTTGCCTCCTGAAAACCCAGGATGGAAAAAGATTTAAATTAATAATCCac i papAnu2.chr19 I 226 C 0 s chlSab2.chr6 47645580 140 + 50890351 CCGGGCATTGACGTGGTGATTGAGAGTCTCCCCGCGGATGTCCTTTGCTGCCGCCTCACACTTCTCCATGTCTCGGCAGGCCAGGATGATGTTGCCTCCTGAAAACCCAGGATGGAAAAAGATTTAAATTAataatccac i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 59028 140 + 138250 CCGGGCATTCACATGGTGATTGAGGGTCTCCCGGCGGATGGCTCTGGCCGCCGCCTCACACTTCTCCATGTCTCGGCAGGCCAGGATGACGTTGCCTCCTGAAAACCCGGGATAGAAAAAGGTTTATGTTAACAACccac i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20135048 139 - 122678785 CCAGGCACTGACACGGTGATTAAGGGTTTCCCCACGAATCTCCTTTGCCGCTGCCTCACACTTCTCCATATCTCGACAGGCCAGAATGATGTTGCCTCCTGGAAGCCCGGGATAGGAAAAAA-CTAATTTTTCAATCCTC i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103390738 2381 - 106955855 M a score=6925.000000 s hg38.chr19_GL949747v2_alt 702052 6 + 729520 tcctgg s panTro4.chr19 59969630 6 + 63644993 tcctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921952 6 + 60714840 tcctgg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55833001 6 + 59248254 gcctgg i macFas5.chr19 C 0 M 23308 s papAnu2.chr19 47946040 6 + 51301725 gcctgg i papAnu2.chr19 C 0 I 2465 s chlSab2.chr6 47645720 6 + 50890351 gcctgg i chlSab2.chr6 C 0 I 2646 s calJac3.chr22_GL285922_random 59168 6 + 138250 tcctag i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20135187 5 - 122678785 GCCCA- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103390738 2381 - 106955855 M e rheMac3.chr19 60696463 3813 + 64156825 I a score=43160.000000 s hg38.chr19_GL949747v2_alt 702058 83 + 729520 gtactgaccccagagac--atgaaaacat-------------acgtctacacaaaaacacatccaccaatgttcactgcggcattcttcacaaaagcc s panTro4.chr19 59969636 83 + 63644993 gtactgaccccagagac--atgaaaacat-------------acgtctacacaaaaacacatccaccaatgttcactgcggcattcttcacaaaagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921958 83 + 60714840 gtactgaccccagagaa--atgaaaacat-------------acgtctacacaaaaacacgtgcgccaacgttcactgcggcattcttcacaagagcc i ponAbe2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 59174 95 + 138250 atactgaccctggagaa--atgaaaacatttttacacaaaacacgtctacacaaaagcacatgcaccaatgttcgc-atggcgttcttcacagaagcc i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20135192 85 - 122678785 GTACAGAGAACAAACACaaatgaaaacac-------------aggtctgctcaagagtgtgtacacacgagcccccagctgcgctgttcacggcagcc i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I e macFas5.chr19 55833007 23308 + 59248254 M e rheMac3.chr19 60696463 3813 + 64156825 I a score=179698.000000 s hg38.chr19_GL949747v2_alt 702141 240 + 729520 aaaaggtagaaa-caaccaaatgcccatctgtggatgaagggacaacaa-aatgtggtccatccatagagatggaatattagacggccgtgaaaaggagtgaagcactggctcatgctacagcaaggatgaccgtcagaaacactgtgctcggggaaagaaaccagacacgaaagaccacacagcgtacaatcccatttacatgaattctatgtatatgatttcacacctatgaaacgccca s panTro4.chr19 59969719 240 + 63644993 aaaaggtagaaa-caaccaaatgtccatctgtggatgaagggacaacaa-aatgtggtccatccatagagatggaatattagacggctgtgaaaaggagtgaagcactggctcatgctacagcaaggatgaccgtcagaaacactgtgctccgggaaagaaaccagacacgaaagaccacacagcgtagaatcccatttacatgaattctatgtatatgatttcacacctatgaaatgccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56922041 240 + 60714840 aaaaggtagaaa-caaccaaatgtccatctgtggatgaagggacaacaa-aatgtggtccagccacagagatggaatattagacggccgtgaaaaggagtgaagcgctggctcacgctacagcaaggatgaccgtcagaaacactgtgctcggggaaagaaaccagacacgaaagaccacacagcgtacaatcccatttacatgaaTTCTATTTATATGATTTCACACCTATGAAATGCCCA i ponAbe2.chr19 C 0 I 393 s macFas5.chr19 55856896 234 + 59248254 aaaaaaaaaaaa-caaccaaatgtctatccgtgaatgaagggctaacaa-aatgtggtccatccatagagatggaatatta----gccatgaaaaggagtgaagcactggctcacgctacagcaagaatgaccctcagaaacactgtgctcagggaaagaaaccagacacgaaagac--cacagtgtccagtcccatttacatgaatgctatgtgtatgatttcacacctatgaaatgccca i macFas5.chr19 M 23308 C 0 s calJac3.chr22_GL285922_random 59269 228 + 138250 agaaggtagaaa-----ccaatgtccatccgtgggtaaagagataacaa-ca--tggtccct-cagaggggcagaatattacacagctgtgaaaaggagtggagcactgactcaggctacagcaaggaagacc-tcagaaactc--tgctcaggaagagaaagcagacac--aaggccacgtagtggacaatcccatttacaggaattctgttcacacgatttcacgcatatgaaatgccca i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20135277 208 - 122678785 gaaatatggaaaccacccctgtgtccatcagctgctgagcagaaatgaacaaggtgttacatccagagc-ctggaatgctactcggccacggaatagaacaaaacactgacacatggtataacataggtggacctcataaa---tgtgctca-taaaatgtgccagtcacaaaaagatatgtggtg-----------------------------caggatttcgtgtttatgaaatacctg i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I e rheMac3.chr19 60696463 3813 + 64156825 I a score=13443.000000 s hg38.chr19_GL949747v2_alt 702381 18 + 729520 gaataggcaaatccatag s panTro4.chr19 59969959 18 + 63644993 gaataggcaaatccatag i panTro4.chr19 C 0 C 0 s macFas5.chr19 55857130 18 + 59248254 gaataggcaaatctatag i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 59497 18 + 138250 gaataagcaaatccacag i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20135485 18 - 122678785 gaacaggccgatccacag i canFam3.chr1 C 0 I 1359 e ponAbe2.chr19 56922281 393 + 60714840 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I e rheMac3.chr19 60696463 3813 + 64156825 I a score=155682.000000 s hg38.chr19_GL949747v2_alt 702399 399 + 729520 agaaagaaaatagattcttggttttctagggcagggggtggggagagggaattacagcttgatagtt-acagtgagc-aggtttctttctagggtaacag--atgttctaagattgattttaaagatggttgcat-------cattctgtgactatactaaacatcactgaattggtcgggcacggtggctcacacctgtaattccagcactttgggaggccaaggcaagaggatTCCCCATCCTCTCCtttttttttttttttt---agatggag--tctcactctgtcacccaggctggagtgcggtggcgcaatctcggctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcacct---accacaactagctaa s panTro4.chr19 59969977 405 + 63644993 agaaagaaaatagattcttggttttctagggcagggggtggggagagggaattacagcttgatagtt-aaagtgagc-aggtttctttctagggtaaccg--atgttctaagattgattttaaagatggttgcat-------cactctgtgactatactaaacatcactgaattggtcgggcacggtggctcacacctgtaattccagcaatttgggaggccaaggcaagaggatTCCCCATCCTCTCCtttttttttttttttttttagatggag--tctcactctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcaacctccacctcctgggttgaagcaattctcctgcctcaacctcccgagtagctgggattacaggcgcctgccaccacaactagctaa i panTro4.chr19 C 0 C 0 s macFas5.chr19 55857148 399 + 59248254 agaaagaaaatagattattggttttctagggc----tgcaggcagagggaattacagcttgatagttaaaagtgagcaaggtttctttctagggtaacagaaatgttctaagattgactttaaagatggttgcatcactctgcactctgtgactatactaaacaccatggaattCATcaggcacggtggctcacacctggaatcccagcacttggggag-----gGCATTAGGACt-----ttttttccttttttttttttttgt---agttggag--tctcactctgtcaccgaggctggagtgcagtggtgcaatctcagctcactgcaacctccacctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcctgccaccacacctagctaa i macFas5.chr19 C 0 I 14 s calJac3.chr22_GL285922_random 59515 374 + 138250 agaaagaaaatagattattggtttcccagggc----tgtggggagaaggaattgcagcttggtagtt-aaa---agcaacgtt-----------taacaa--atgttctagggttgatttgaaagacggctgcat-------cgc----tgactacactaaacatcaccgaactggccggacacggtggctcacacctgtcatcccagcactttgggaggctgaggcaagaggatt-----gtttttccttttttttcttg-------agacggggtctctctctctgctgtccaggctggagtgcagtggtgcgatctcggctcactgcaacctccacctccagggttcaagtgattctcctgccttagcatcctaagtagctggggttacaggtgcccaccacctcacccagctaa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20135503 1359 - 122678785 I e ponAbe2.chr19 56922281 393 + 60714840 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I e rheMac3.chr19 60696463 3813 + 64156825 I a score=353034.000000 s hg38.chr19_GL949747v2_alt 702798 528 + 729520 ttttttatttttttattttt--------agtagagacagcggtttcaccatgttagccaagctagtcttgaacttctgacctcaggtgatccaccccgcggcctcccaaagtactgggattacaaataagccacaatgcccagccTCCAAtttttt-ttgttgtggtaaaatacaaatcacttaaaatttatcatcttaacccccttttctttttgtttattattattttt---ttttttttgagtc--agtctcactctgctgccgcggctggagtgc--tggcgccatcacagctca-ttcagccttgaactcctaggctcaagtgacctgggactataggtaccacctgtgccagcatgcctggctaactctgg-------------tagagatgggggtgttgctatggtgtccaggctggtctggaacccctggcctcaagtgatcctcctgcctcagcctccaaaagtgctggaattatagatgtgagccaccgagacccgccctcttagccatttttaagtgtccagttcattggtattaaaaacatttat s panTro4.chr19 59970382 539 + 63644993 ttttttttttttttttttttttttttttagtagagacaggggtttcaccatgttagccaagctagtcttgaacttctgacctcaggtgatccaccccacggcctcccaaagtactggggttacaaataagccacaatgcccagccTCCAAtttttt-ttgttgtggtaaaatacaaatcacttaaaatttatcatcttaaccccctttTCTTTTTGTTTATTAttattattattttttttttgagtc--agtctcactctgctgccgcggctggagtgc--tggcgccatcatagctca-ttcagccttgaagtcctaggctcaagtgacctgggactataggtaccacctgtgccagcatgcctggctaactctgg-------------tagagatgggggtgttgctgtggtgtccaggctggtctggaacccctggcctcaagtgatcctcctgcctcagcctccaaaagtgctggaattatagacgtgagccaccgagaccagccctcttagccatttttaagtgtccagttcattggtattaaaaacatttat i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60700276 515 + 64156825 tttttttttttttttttttt--------agtagagacaagggtttcaccatgttagccaagctagtcttaaacttctgacctcaggtgatccactccgcagcttcccaaagtactgggattacaaataagccacaatgcctggccTCCAA-ttttt-ttgttgtggtaaaatacaaatcacttaaaattaaccatcttaaccTCCCCCCCGCtttttt--------ttttt---ttttttttaagtcagagtctcattctgctgccctggctgg-gtgc--tggcaccatcatagctcacctcagccttgaagtcctgggctcaagtgacctgggactacaggcaccacctgtgccagcatgcctggctaattttgg-------------tagagatgtgggtcttgctacagtgtccaggctggtctggaaaccctggcctcaagtgatcctcctgccttagcctccaaaagtgctggaattatagatgtga---accaAGACCAGccctcttaaccatttttaagcgtccagttcattggtattaaaaacatt--- i rheMac3.chr19 I 3813 C 0 s macFas5.chr19 55857561 515 + 59248254 tttttttttttttttttttt--------agtagagacaagggtttcaccatgttagccaagctagtcttgaacttctgacctcaggtgatccactccgcagcttcccaaagtactaggattacaaataagccacaatgcctggccTCCAA-ttttt-ttgttgtggtaaaatacaaatcacttaaaattaaccatcttaaccTCCCCCCCGCtttttt--------ttttt---ttttttttaagtcagagtctcattctgctgccctggctgg-gtgc--tggcaccatcattgctcacctcagccttgaagtcctgggctcaagtgacctgggactacaggcaccacctgtgccagcatgcctggctaattttgg-------------tagagatgtgggtcttgctacagtgtccaggctggtctggaaaccctggcctcaagtgatcctcctgccttagcctccaaaagtgctggaattatagatgtga---accaAGACCAGccctcttaaccatttttaagcgtccagttcattggtattaaaaacatt--- i macFas5.chr19 I 14 C 0 s calJac3.chr22_GL285922_random 59889 494 + 138250 ----ttttttttgcatttta--------agtagagacaggggtttcaccatgttagcccagctagtctcaaactcctgacctcaggtgatcggctcctcagcctcccaaaccgcttgggttacaAATACCCGACAGCACCTAGCCTCCATTtttttgttgttgttgtaaaattacaatcacttaaaatttactgtttcaacacccccc------------------ttttc---tttcttgggagtcaaagtcaca--ctgctgctcaggttggaatgcagtggtgccatcctagctca-ttcagccttgaagtcctgggctcaagtgacctgggactacaggcacca--------------tctggctaatttgggggtggggggcgcagagagatg-gggtcttcctatgttgtccaggctggtctggaactcctggcctaaagtgattctcctgcatcagcctccaaaagtgctggaattatagatgtga-------------gccaccttacccatttttatgtatccagttcattggtactgaaaacatgcat i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20135503 1359 - 122678785 I e ponAbe2.chr19 56922281 393 + 60714840 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I a score=95601.000000 s hg38.chr19_GL949747v2_alt 703326 89 + 729520 ggctgggccgggcatggtggctcacacctgtaatcccagcactttgggagaccaaggcaggtggatcacctgaggtcaggagttcaaga s panTro4.chr19 59970921 89 + 63644993 ggctgggccgggcacggtggctcacacctgtaatcccggcacttcgggagaccaaggcaggtggatcacctgaggtcaggagttcaaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56922674 89 + 60714840 GGCTGggccgggcacggtggctcacacctgtaatcccagcactttgggagaccaaggcaggtggatcacctgaggtcaagagttcaaga i ponAbe2.chr19 I 393 C 0 s rheMac3.chr19 60700791 77 + 64156825 ------------catggtagctcacacctgtaatcccagcattttgggaggccgaggcgggtggatcacttgaggtcaggagttcaaga i rheMac3.chr19 C 0 I 35 s macFas5.chr19 55858076 77 + 59248254 ------------catggtagctcacacctgtaatcccagcattttgggaggccgaggcgggtggatcacttgaggtcaggagttcaaga i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 60383 83 + 138250 -----ggccgggcgtggtggctca-gcctgtcatcccagcactttcggaggccaaggcgggtggatcacctgaggtcgggagtttgaga i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20135503 1359 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I a score=10431.000000 s hg38.chr19_GL949747v2_alt 703415 16 + 729520 ccagcctggccaacac s panTro4.chr19 59971010 16 + 63644993 ccagcctggccaacac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56922763 16 + 60714840 ccagcctggccaacac i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55858153 12 + 59248254 ----cgaggccaacat i macFas5.chr19 C 0 I 23 s calJac3.chr22_GL285922_random 60466 16 + 138250 ccagcctgaccaacat i calJac3.chr22_GL285922_random C 0 I 23 e canFam3.chr1 20135503 1359 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I e rheMac3.chr19 60700868 35 + 64156825 I a score=480604.000000 s hg38.chr19_GL949747v2_alt 703431 443 + 729520 attacaaacttagctgggtgtggtgttgcatgcctgtaatcccagctactcgggtggctgaggcaggagaattgcttgaacccgggaggcgaaggttgcagtgagccaagatcatgccactgcactccagcctgggcgacaagagcaaaactccatctcaaaaaaaaaaaaacaataataataattcctaatgttgtgcaaccattacaaccatccatctctcaaattgtttcatcttgccaaactaaacttccgtttccattaaacag-taactccccattctcccctcccctcctgacccctggcaag-caccattccaact----tctctatgaatttaactgtaggtagctcctgtaagtggaatcataccgtatttgctcttctgtcgactggcttatttcacttcatggaatgtcctcaaggttcatctgtttcaatgccctt s panTro4.chr19 59971026 441 + 63644993 attacaaacttagctgggtgtggtgttgcacgcctgtaatcccagctactcgggtggctgaggcaggagaatcgcttgaacctgggaggcgaaggttgcagtgagccaagatcatgccactgcactccagcctgggcgacaagagcaaaactccatctcaaaaaaaaaaaa-caataataataattcctaatgttgtgcaaccattacaaccatccatctctcaaattgtttcatcttgccaaactaaacttc-gtttccattaaacag-taactccccattctcccctcccctcctgacccctggcaag-caccattcaaact----tctctatgaacttaactgtaggtagctcctgtaagtggaatcataccgtatttgctcttctgtcaactggcttatttcacttcatggaatgtcctcaaggttcatctgtttcaatgccctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56922779 441 + 60714840 aatacaaacttagctgggtgtggtgctgcatgcctgtaatcccagctacttgggtggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccaagatcatgccactgcactccagcctgggcgacaagagcaaaactccatctcaaaaagaaaaa--CAGTAATAATAATTCCTAA---tgtgcaaccatgacaaccatccatctctcaaattgtttcatcttcccaaactaaacttctgtttccattaaacaa-taactcctcattct-ccctccactcccgacccctggcaag-caccattcaaacttctctctctatgaatttaactctaggtggctcctgtaagtggaatcatacagtatttgctcttctgtcgaccggcttatttcacttcgtggaatgtcctcaaggttcatctgtttcaatgccctt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60700903 440 + 64156825 aatacaaaattagctgtttgtgttgccacatgcctgtagtcccagccacttgggaggctgaggcaggagaatcacttgaacccaggaggtggaggttgcagtgagctgaggtcatgccactgcactccagcctgggcgacaagagcaaaactccctctcaaaaagaaa----cagtaataataatttctaatgttgtgcaaccatcacaaccacctgtttctcaaactgtttcatcttcccaaactaaacttctgtgcccattaaataattaactccccattctctcctcccctcccaacccctggcaagccattattcaaact----tctctatgaatttaactctaggtagctcctataagtggaatcatacagtatttgctcttctgtcgactgactgatttcacttcatagaatgtcctcaaggttcatc-gtttcaatgacctt i rheMac3.chr19 I 35 C 0 s macFas5.chr19 55858188 440 + 59248254 aatacaaaattagctggttgtggtgccacatgcctgtagtcccagccacttgggaggctgaggcaggagaatcacttgaacccaggaggtggaggttgcagtgagctgaggtcatgccactgcactccagcctgggcgacaagagcaaaactccctctcaaaaagaaa----cagtaataataatttctaatgttgtgcaaccatcacaaccacctgtttctcaaactgtttcgtcttcccaaactaaacttctgtgcccattaaataattaactccccattctctcctcccctcccaacccctggcaagccattattcaaact----tctctatgaatttaactctaggtagctcctataagtggaatcatacagtatttgctcttctgtcgactgactgatttcacttcatagaatgtcctcaaggttcatc-gtttcaatgacctt i macFas5.chr19 I 23 C 0 s calJac3.chr22_GL285922_random 60505 417 + 138250 aatacaaaattagctgggtgtggtggtgcatgcctgtaatcccagctacttgggaagctgaggcaggagaattgcttgaacctgagaggcagaggttgcagcaagctgagatggtgccactgtaccccagcctgggcaacaagagcaaaaatccatctcaaacaaaaa----aagtcataa-------------tgtacaaccaacacgactacccgtctctagaacgttttcatcttcccaaactaaaattctgtgtctattaaacaa-taactccccattctcccctcccc-----acccctggcaag-cac----caaact----cctctatgaatttaactctaggtagctcatataagtggaatcacacagtatttgttcttctgtggaatggcttatttcacttagtgtcatgtcctcaaggtccatccatTAGAATGCCCCT i calJac3.chr22_GL285922_random I 23 I 462 e canFam3.chr1 20135503 1359 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I a score=10493.000000 s hg38.chr19_GL949747v2_alt 703874 13 + 729520 -ttttttgttttgc s panTro4.chr19 59971467 13 + 63644993 -ttttttgttttgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56923220 13 + 60714840 -ttttttgttttgc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60701343 14 + 64156825 actttttgttttgt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55858628 14 + 59248254 acTttttgttttgt i macFas5.chr19 C 0 C 0 e canFam3.chr1 20135503 1359 - 122678785 I e calJac3.chr22_GL285922_random 60922 462 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I a score=13589.000000 s hg38.chr19_GL949747v2_alt 703887 19 + 729520 tttgttt-tgttttgttttT s panTro4.chr19 59971480 19 + 63644993 tttgttt-tgttttgttttT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56923233 12 + 60714840 tttgttt--------ttttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60701357 19 + 64156825 tttgttt-tgctttgttttg i rheMac3.chr19 C 0 I 6 s macFas5.chr19 55858642 19 + 59248254 tttgttt-tgctttgttttg i macFas5.chr19 C 0 I 6 s papAnu2.chr19 47948511 20 + 51301725 ttcgtttctttttttttttt i papAnu2.chr19 I 2465 I 6 e canFam3.chr1 20135503 1359 - 122678785 I e calJac3.chr22_GL285922_random 60922 462 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I a score=306716.000000 s hg38.chr19_GL949747v2_alt 703906 200 + 729520 gagtctcactctgtcacccaggctggagtgccgtggcgccatctctgctcactgcaacccctgcctctcaggttcaagcgattctcctgcttc-agcctcccaagcagc-tgggactacaggtgcccaccacaactcctggctaa-tttttgta-tttttagtagagagggggtttcaccatgttggttaggctggtctcgaac s panTro4.chr19 59971499 200 + 63644993 gagtctcgctctgtaacccaggctggagtgcagtggcaccatctctgctcactgcaacccctacctctcaggttcaagcgattctcctgcttc-agcctcccaagtagc-tgggactacaggtgcccaccacaactcctggctaa-tttttgta-tttttagtagagagggggtttcaccatgttggttaggctggtcttgaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56923245 200 + 60714840 gagtctcgctctgtcacccaggctggagtgcagtggcgccatttctgctcactgcaacctctgcctctcaggttcaagcaattctcctgcttc-agcctcccaagtagc-tgggactacaggtgcccgccacaactcctggctaa-tttttgta-tttttagtagagacggggtttcaccatgttggttaggctggtctcaaac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60701382 201 + 64156825 gagtcccgctctgttgcccaggctggagtgcagtggtgcgatctcggttcaccgcaacctctgcctcccgggttcaagcgattctcctgcctc-agtctctcgggtagcttgggattacaggcacccactacaatgcctggctaa-tttttgta-tttttagtagagatggggtttcaccacgttggttaggctggtctcgaac i rheMac3.chr19 I 6 C 0 s macFas5.chr19 55858667 201 + 59248254 gagtcccgctctgttgcccaggctggagtgcagtggtgcgatctcggttcaccgcaacctctgcctcccgggttcaagcgattctcctgcctc-agtctctcgggtagcttgggattacaggcacccactacaatgcctggctaa-tttttgta-tttttagtagagatggggtttcaccacgttggttaggctggtctcgaac i macFas5.chr19 I 6 C 0 s papAnu2.chr19 47948537 202 + 51301725 gagtctcgctctgttgcccaggctggagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcacgccattctcccgcctc-agcctcccgagtagc-tgggactgcaggcgcccgccaccgcgcccggctagttttttgtattttttagtagagacggggtttcaccgtgttagccaggatggtctcgatc i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 47648372 203 + 50890351 gagtttcgctctgtcgcccaagctggagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcgagactcccgagtagc-tgggactacaggcgcccgccacctcgcccggctagatttttgtattttttagtagagacggggtttcaccgggttagccaggatggtcttgatc i chlSab2.chr6 I 2646 C 0 e canFam3.chr1 20135503 1359 - 122678785 I e calJac3.chr22_GL285922_random 60922 462 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M a score=154649.000000 s hg38.chr19_GL949747v2_alt 704106 72 + 729520 tcctgacctcgtgatccgccagctttggcctcccaaagtactga--ttacaggcgtgcaccaccgcgcccggcc s panTro4.chr19 59971699 74 + 63644993 tcctgacctcgtgatccgccagcttcggcctcccaaagtgctgagattacaggcgtgtgccaccgcacccggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56923445 74 + 60714840 tcctgacctcgtgatctgcccgcctcggcctcccaaagtgctgagattacaggtgtgcgccaccacgcccggcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393119 74 - 106955855 tcctgaccttgtgagccgccagcctcggcctcccaaagtgctgagattacaggcatgtgccaccgcgcccagcc i nomLeu3.chr10 M 2381 C 0 s rheMac3.chr19 60701583 74 + 64156825 tcctgacctggtgatccatccgccttagcctcccaaagtgctgggattacaggcttgagccactgcgcccggcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55858868 74 + 59248254 tcctgacctggtgatccatccgccttagcctcccaaagtgctgggattacaggcttgagccactgcgcccggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47948739 74 + 51301725 tcctgacctcaggatctgcccgtctcggcctcccgaagtgctgggattacaggtgtgagccactgcgcctggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47648575 74 + 50890351 tcctgacctcgtgatccgcccgtctcggcctcccaaagtgctgggattacagacttgagccaccgcgcccggcc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20135503 1359 - 122678785 I e calJac3.chr22_GL285922_random 60922 462 + 138250 I a score=404154.000000 s hg38.chr19_GL949747v2_alt 704178 157 + 729520 agaatgcccttcctttttaaggctgaatcatatgcccctgtctatagaagccacattctgtttccctgttcatctgtggatgggtgcctgggttccttccacctccggactgtgaataatgctgcagtgagcatggatgtacagatatctctctgag s panTro4.chr19 59971773 155 + 63644993 agaatgcccttcctttttaaggctgaatcatatgccc--gtctatagaagccacattctgtttccctgttcatctgtggatgggtgcctgggttccttccacctctggactgtgaataatgctgcagtgagcatggatgtacagatatctctctgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56923519 157 + 60714840 agaatgcccttcctttttaaggctgaatcatatgcccctgtctatagaggccacattctgtttccctgttcatctgtggatgggtgcctgggctccttccacctctggactgtgaataatgctgtaatgagcatggatgtgcaggtatctctctgag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393193 157 - 106955855 agaatgcccttcctttttaaggctgaatcatatgcccctgtctatagaggccacattctgtttccctgttcatctgtggatgagtgcctgggttccttccacttctggacagtgaataatgctgcaatgagcatggatgtgcagatatctctctgag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60701657 155 + 64156825 --aatgcccttcgtttttaaggctgaatcatataccactgtctacagaggccacattctgtttctctgttcatctgtggatgggtgcctggcttccttccaccttcggactgtgaataacgctgcagtgagcatggatgtgcagatatctctctgag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55858942 155 + 59248254 --aatgcccttcgtttttaaggctgaatcatataccactgtctacagaggccacattctgtttctctgttcatctgtggatggatgcctggcttccttccacctttggactgtaaataacgctgcagtgagcatggatgtgcagatatctctctgag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47948813 138 + 51301725 --aatgcCCTTcgtttttaaggctgaatcatatACCACTGTCTACAGAGGCCACACTCTGTTTCTCTGTTCATCTGTGGATGGGTGCCTGGCT-----------------TGTGAATAACGCTGCAGTGAGCATGGATGTGCAAATCTCTCTCTGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47648649 152 + 50890351 -----gcccttcgtttttaaggctgaatcgtataccactgtctacagaggccacgttctgtttctctgttcatctgtggatgggtgcctggcttccttccaccttcggactgtgaataatgctgcagtgagcgtggatgtgcagatctctctctgag i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 61384 139 + 138250 agaaTGCccttccttttgcaggctgaatcatgttccactgtctgcagactccacg-tgtgcttctctgttcatctgt-gatgggtgcctgggttgct---------ggaccgtgaatcatgct-------gcatgggtgtgcaaatatctctccgcg i calJac3.chr22_GL285922_random I 462 C 0 e canFam3.chr1 20135503 1359 - 122678785 I a score=1100946.000000 s hg38.chr19_GL949747v2_alt 704335 348 + 729520 AGCCAAAGCAGGGGAGATTTTACCTCTCCTGGCCAGTTCCAAGGCGGTCTGCTTCCCGATGCCTGTGTTGGCACCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGGCAAGCCCCACCGGTGACATAGTCCCTGAGGGTGAGAAGCGGCACGGTCAGTCCTGTGGGCCCACTCTCACCCCACGTGCCCCTGACTGAATGATCTCAGGCAA---CCTTGTCTGAGCTCACTCACATACCCCAACTGAAACAC--AGACATCATCACATCACACCAAGGGACCTC-TGTCATGTTCTCCAT--------------------------------AAGTGGCT------------CCACCCAGTGT----------CTGGCGTGTGGAACGCCTTCAGCAA s panTro4.chr19 59971928 348 + 63644993 AGCCAAAGCAGGGGAGATCTTACCTCTCCTGGCCAGTTCCAAGGCGGTCTGCTTCCCGATGCCTGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGGCAAGCCCCACCGGTGACATAGTCCCTGAGGGTGAGAAGCGGCACGGTCAGTCCTGTGGGCCCACTCTCACCCCACGTGCCCCTGACTGAATGATCTCAGGCAA---CCCTGTCTAAGCTCACTCACATACCCCAACTGAAACAC--AGACATCATCACATCACACCACGGGATCTC-TGTCATGTTCTCCAT--------------------------------AAATGGCT------------CCACCCCGTGT----------CTGGTGTGTGGAACGCCTTCAGCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56923676 348 + 60714840 AGCCAAAGCAGGGGAGATTTTACCTCTCCTGGCCAGTTCCAAGGCCGTCTGCTTCCCGATGCCTGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGGCAAGCCCCACCGGTGACATAGTCCCTGAGGGTGAGAAGCGGCACGGTCAGTCCTGTCTGCCCACTCTCACCCCACGTGCCCCTGACTGAATGATCTCAGGCAA---ACCTGTCTGAGCTCACTCACATACCCCAACTGAAACAC--AGACATCATGACATCACACCACGGGATCTC-TGTCATGTTCTCCAT--------------------------------AAATGGCT------------CCACCCAGTGT----------CTGGTGTGTGGAACGCCTTCAGCAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393350 345 - 106955855 agccAAAGCAGGGGAGATTTTACCTCTCCTGGCCAGTTCCAAGGCGGTCTGCTTCCCAATGCCTGTGTTGGCGCCCGTCACAATGACCGTCTTCCCAGAGATGGTGGCCTTGCTGGGGCAAGCCCCACCGGTGACATAGTCCCTGAGGGTGAGAAGCGGCACGGTCAGTCCTGTCTGCCCA--CTCACTCCACGTGCCCCTGACTGAATGATCTCAGGCAA---ACCTGTCTGAGCTCACTCACGTACCCCAACTGAAACAC--AGACAACATCACATCACACCATGGGATCTC-TGTCACGTTCTCCAC--------------------------------AAATGGCT------------CCACCCA-TGT----------ATGGTGTGTGGAACGCCTTCAGCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60701812 348 + 64156825 AGCCAAAGCAGGGGAGATTTTACCTCTCTTGGCCAATTCCAAGGCGGTCTGCTTCCCGATGCCTGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGACAAGCCCCACCGGTGACATAGTCCCTGAGGGTGAGCAGCGGCATGGTCAGTCCTGTCTGCCAACTCTCACTCCACGTGCCCCTGACTGAGTGATCTCAGGCAA---AGCCGTCTGAGCTCACTCACATCCCCCAACTGAAACAC--AGACGTCATCACATCACACCACGGGATCTC-CGTCCTGTTCTCCAT--------------------------------AAATGACT------------CCACCCAGTGT----------CTGGTGTGTGGAACGCCTTCCGCAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55859097 348 + 59248254 AGCCAAAGCAGGGGAGATTTTACCTCTCTTGGCCAATTCCAAGGCGGTCTGCTTCCCGATGCCTGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGACAAGCCCCACCGGTGACATAGTCCCTGAGGGTGAGCAGCAGCATGGTCAGTCCTATCTGCCAACTCTCACTCCACATGCCCCTGACTGAGTGATCTCAGGCAA---AGCCGTCTGAGCTCACTCACATCCCCCAACTGAAACAT--AGACGTCATCACATCACACCACGGGATCTC-CGTCCTGTTCTCCAT--------------------------------AAATGACT------------CCACCCAGTGT----------CTGGTGTGTGGAACGCCTTCCGCAA i macFas5.chr19 C 0 I 302 s papAnu2.chr19 47948951 347 + 51301725 AGCCAAAGCAGGGGAGATTTTACCTCTCTTGGCCAATTCCAAGGCGGTCTGCTTCCCGATGCCTGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGACAAGCCCCACCAGTGACATAGTCCCTGACGGTGAGAAGCGGCATGGTCAGTCCTGTCTGCCAACTCTCACTCCACGTGCCGCTGACTGAGTGATCTCAGGCAA---AGCCGTCTGAGCTCACTCACGTCCCCCAACTGAAACAC--GGACATCATCACATCACACCACAGGATCTC-CGCCCTGTTCTCCAT---------------------------------GATGACT------------CCACCCAGTGT----------CTGGTGTGTGGAACGCCTTCCGCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47648801 348 + 50890351 AGCCAAAGCAGGGGAGATTTTACCTCTCTTGGCCAATTCCAAGGCGGTCTGCTTCCCGATGCCTGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGACACGCCCCACCGGTGACATAGTCCCTGAGGGTGAGAAGCGGCATGGTCAGTCCTGTCTGCCAACTCTCACTCCACGTGCCCCTGACTGAGTGACCTCAGGCAA---ACCCGTCTGAGCTCACTCACATCCCCCAACTGAAACAC--AGACATCATCACATCACACCACGGGATCTC-TGTCCTGTTCTCCAT--------------------------------AAATGACT------------CCACCCAGTGT----------CTGGTGTGTGGACCGCCTTCAGCAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 61523 399 + 138250 agccAAAGCAGGGGAGAGTTTACCTCTTTTCGCCAGTTCAAAGGCGGTCTGCTTCCCTATGCCCGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGGCAAACCCCACCGGCAACATTGTCCCTGAGCGCGGGAAGGGGCACAGTCAGTCCTGTCTGCCCACTCTCACCCCACGTGCCCCTGACTGAGTGATCTCTGACAA---ACCCGTATGAGCTCACTCCCGCCCCCCAACTGAAAAAC--AGATGTCATCACATCACACAGTGGGATCTC-TGTCCTGttctccacgttggtcaggctggtctcgaactcttgacctcaggtgatctgtccgccttggcctcccaaagtgctgggatcacaggtgtgagccactgcacccg--- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20136862 338 - 122678785 AGCCTCAGCAGAAAAAG---CACCTCTTCTGGCCAGCTCCAAGGCCGTCTGCTTCCCAATGCCTGTATTGGCGCCAGTCACAATGACGGTCTTCCCAGGAATGGTGGCCTTGCTGGGACAGGCCCCGCCCGCAATGTAGTCTCTGAAGATAAGAAACA--ATCATCAGTTCTGTCTGC--ACCCCCACCACACATGCCCCTG--TTAAtgatcttgagcaaatgaccccactgagcttgtgt---tcccccaaaggacagatgagaaggacatctcataactccgtgggggccagtgtgatggtacaggc--------------------------------aaa-ggct------------cagcaca--gc----------cctgTGCGAGGAGGTGCCACAACA- i canFam3.chr1 I 1359 C 0 a score=27717.000000 s hg38.chr19_GL949747v2_alt 704683 9 + 729520 GTGACAGTC s panTro4.chr19 59972276 9 + 63644993 GTGACAGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924024 9 + 60714840 GTGACAGTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393695 9 - 106955855 GTGACACTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60702160 9 + 64156825 GTGACAGtc i rheMac3.chr19 C 0 I 304 s macFas5.chr19 55859747 9 + 59248254 gTGACAGTC i macFas5.chr19 I 302 I 1 s papAnu2.chr19 47949298 9 + 51301725 gtgacagcc i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47649149 9 + 50890351 GTCACAGtc i chlSab2.chr6 C 0 I 313 s calJac3.chr22_GL285922_random 61922 9 + 138250 gTGACCATC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20137200 8 - 122678785 -TGACAATC i canFam3.chr1 C 0 C 0 a score=443.000000 s hg38.chr19_GL949747v2_alt 704692 1 + 729520 A s panTro4.chr19 59972285 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924033 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393704 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 61931 1 + 138250 G i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20137208 1 - 122678785 A i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47649158 313 + 50890351 I e papAnu2.chr19 47949307 1 + 51301725 I e macFas5.chr19 55859756 1 + 59248254 I e rheMac3.chr19 60702169 304 + 64156825 I a score=25641.000000 s hg38.chr19_GL949747v2_alt 704693 7 + 729520 TTATTTT s panTro4.chr19 59972286 7 + 63644993 TTATTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924034 7 + 60714840 TTATTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393705 7 - 106955855 TTATTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60702473 7 + 64156825 TTATTTT i rheMac3.chr19 I 304 C 0 s macFas5.chr19 55859757 7 + 59248254 TTATTTT i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47949308 7 + 51301725 ttttttt i papAnu2.chr19 I 1 I 2054 s chlSab2.chr6 47649471 7 + 50890351 TTATTTT i chlSab2.chr6 I 313 C 0 s calJac3.chr22_GL285922_random 61932 7 + 138250 TTATTTT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20137209 7 - 122678785 TTACTTT i canFam3.chr1 C 0 C 0 a score=65777.000000 s hg38.chr19_GL949747v2_alt 704700 25 + 729520 ATAAATGCTCACTGCATGAGATTCC s panTro4.chr19 59972293 25 + 63644993 ATAAATGCTCACTGCATGAGATTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924041 25 + 60714840 ATAAATGCTCCCTGCATGAGATTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393712 25 - 106955855 CTAAATGCTCACTGCATGAGATTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60702480 25 + 64156825 ATAAATGCCCACTGCATGAGATTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55859764 25 + 59248254 ATAAATGCCCACTGCATGAGATTCC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47649478 25 + 50890351 ATAAATGCCCACTGCATGAGATTTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 61939 25 + 138250 ATAAACACCTACTGCATGAGATTCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20137216 25 - 122678785 GTAAAGACCCACtgtattggtctcc i canFam3.chr1 C 0 I 1695 e papAnu2.chr19 47949315 2054 + 51301725 I a score=102493.000000 s hg38.chr19_GL949747v2_alt 704725 52 + 729520 Cggccaggtgagggggcttgcacctgtaatcccagcactttgggaggccaaa s panTro4.chr19 59972318 52 + 63644993 Cggccaggtgaggtggctcgcgcctgtaatcccagcactttgggaggccaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924066 52 + 60714840 Cggccaggcgaggtggctcgcgcctgtaatcccagcactttgggaggccaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393737 52 - 106955855 Cggccaggcgaggtggctcgcgcctgtaatcccagcactttgggaggccgaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60702505 52 + 64156825 CAgctgggcgaggtggctcgcacctgtaatcccagcactttgggaggccaaA i rheMac3.chr19 C 0 I 3619 s macFas5.chr19 55859789 52 + 59248254 CAgctgggcgaggtggctcgcacctgtaatcccagcactttgggaggccaaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47649503 52 + 50890351 CAgctgggcgaggtggctcgcacctgtaatcccagcactttgggaggccaac i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 61964 32 + 138250 CAGCCCGGCAA--------------gtaatcccagcactttgggag------ i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e papAnu2.chr19 47949315 2054 + 51301725 I a score=135687.000000 s hg38.chr19_GL949747v2_alt 704777 105 + 729520 gttttgggggtgggggggggcgggggcggatcacttgaggtcaggagttcgagtccagcctggcaaacatggcgaga-ccccgtctctact-taaaatacaaaaaTT s panTro4.chr19 59972370 105 + 63644993 gtttggggggggggggggggcgggggtggatcacttgaggtgaggagttcgagtccagcctggcaaacatggtgaga-ccctgtctctact-aaaaatacaaaaaTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924118 96 + 60714840 gtat---------ggggtggtgggggcagatcacttgaggtcaggagttcgagtccagcctggcaaacatggcaaga-ccctgtctctact-aaaaatacaaaaatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393789 97 - 106955855 gttt---------cagggggcgggggcagatcacttgaggtcaggagttcaagtccagcctggcaaacatggcgagacccccgtctctact-aaaaatacaaaaaTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55859841 95 + 59248254 -----------gtcgggggtggggggcaggtcacttgaggtcaggagttcgagtccagcctggcaaacgtggggagacccctgtctctact-aaaaatacaaaaatt i macFas5.chr19 C 0 I 308 s chlSab2.chr6 47649555 96 + 50890351 -----------gtcgggggcggggggcaggtcacttgaggtcaggagttccagtccagcctggtaaacatggggagacccctgtctctactaaaaaatacaaaaatt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 61996 90 + 138250 ------------tcagaggc---aggcagatcacttgaggtcaggagttcaagaccagcctggcaaacatggtgaga-cgcagtctctact-aaaaatacaaaaatt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e papAnu2.chr19 47949315 2054 + 51301725 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=8120.000000 s hg38.chr19_GL949747v2_alt 704882 6 + 729520 AGCCAG s panTro4.chr19 59972475 6 + 63644993 AGCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924214 6 + 60714840 agccag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393886 6 - 106955855 AGCCAG i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47649651 6 + 50890351 agccag i chlSab2.chr6 C 0 I 1937 s calJac3.chr22_GL285922_random 62086 6 + 138250 ggccag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e papAnu2.chr19 47949315 2054 + 51301725 I e macFas5.chr19 55859936 308 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=3338.000000 s hg38.chr19_GL949747v2_alt 704888 5 + 729520 ATGtg s panTro4.chr19 59972481 5 + 63644993 GCGtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924220 5 + 60714840 gcgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393892 5 - 106955855 GCGtg i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 62092 5 + 138250 gcatg i calJac3.chr22_GL285922_random C 0 I 385 e canFam3.chr1 20137241 1695 - 122678785 I e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e macFas5.chr19 55859936 308 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=234121.000000 s hg38.chr19_GL949747v2_alt 704893 476 + 729520 taggga----aaagagagattagactgttactgtgtctatatagaaaggaaagaca-taagagactccattttgaaaaagacctgtacttt--gaacaattgctttgctgagatgttgttaatttgtagctttgacccagccactttgacccaatctggagctcacaaaaacctgtgttgtatgaaatcaaggtttaagggatctagggctgtgcaggaagtgccttgttaac-acaatgtttccaagcagtatacttggt-aaaagtcatcgccagtctctagtctcaataaaccaggggcacgatgcactgcagaaagctgcagggacctctgcccttgaacacagagtattgtccaaggtttctccccgtgggatagtctgaaatatggcctcgtgggatgagaaagacctgaccgtcccccagcccaacacccgtaaagggtctgtgctgaggtggattggtaaaagaggaaagcctcttg s panTro4.chr19 59972486 476 + 63644993 taggga----aaagagagattagactgttactgtgtctatatagaaaggaaagaca-taagagactccattttgaaaaagacctgttcttt--gaacaattgctttgctgagatgttgttaatttgtagctttgacccagccactttgacccaatctggagctcacaaaaacctgtgttgtatgaaatcaaggtttaagggatctagggctgtgcaggacgtgccctgttaac-acaatgtttccaagcagtatacttggt-aaaagtcatcgccagtctctagtctcaataaaccaggggcacaatgcactgcggaaagccgcagggacctctgccattgaacgcggggtattgtccaaggtttctccccatgggacagtctgaaatatggcctcgtgggatgagaaagacctgaccgtcccccagcccgacacccataaagggtctgtgctgaggtggattagtcaaagaggaaagcctcttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924225 483 + 60714840 tagggaaaagaaagagagattagactgttactgtgtctatatagaaaggaaagacattaagagactccattttgaaaaagacctgtactttgagaacaattgctttgctgagatgttgttaatttgtagctttgccccagccactttgacccaacctggagctcacaaaaacctgtgctgtatgaaatcaagttttaagggatctacggctgtgcaggacatgcctcgttaac-aaaatgtttacaagcagtatacgtggtaaaaagtcatcgccattctctagtctcaataaaccaggggcacaatgcactgcagaaagccgcagggacctctgcccttgaaagcggggtattgtccaaggtttctccccatgtgatagtctgaaatatcgcctcgtgggatgagaaagacctgaccgtcccccagccggacacccgtaaagggtctgtgctgaggtgga-tagtaaaagaggaaggcctctcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393897 477 - 106955855 taggga----aaagagagatcagactgttactgtgtctatacagaaaggaaagaca-taagagactccattttgaaaaagctctgtacttt--aaacaattgcttcactgagaggttgttcatttgtagcttcgccccagccgctttgacccaacctggagctcacaaaaacacgtgctgtatggaatcaaggttgaagggatccagggctgtgcaggacgtgccttgttaacaaaaatgtttacaggcagtgtacttggt-agaagtcatcgccattctctagtctcaataaaccaggggcacaatgcactgtggaaagccgcagggacctctgccctggaaagcggggtgttgtccaaggtttctccccatgagatagtctgaaatatggcctcgtgggatgagaaagacctgaccgacccccagcccaacacccgtaaagggtctgtgctgaggaggattagtaaaagaggaaagcctcttg i nomLeu3.chr10 C 0 M 1720 e canFam3.chr1 20137241 1695 - 122678785 I e calJac3.chr22_GL285922_random 62097 385 + 138250 I e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e macFas5.chr19 55859936 308 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=135864.000000 s hg38.chr19_GL949747v2_alt 705369 522 + 729520 cagttgagagagaggaaggccactgtctcctgcctgaccctgggaactgaatgtctcggtataaaacctgattgtacatttgttcaattctgagacaggagaaaagccgccctatggcgggaggcgagacatgtttacagcaatgctgccttgttattctttactccgctgagatgtttgggtggagagaaacatcaatctggcctacgtgcacgtccaggcatagtaccttcccttgaacttaattatgtcatagattcttttgctcacatggtttttgctgac-----ctcattatcaccctgctctcctactacattcctttttgctgaaataatgaagataataatcagtaaaaactgagggaactcagaggccggtgccggtgcaggtccttggtatgctgagcgccggtcccctgggcccactgttgtttctctatactt------tgtgtcttatttcttttctcagtctctcgtcccacccaactagaaatacccacaggtgtggaggggcaggccaccccttca s panTro4.chr19 59972962 528 + 63644993 cagttgagatggaggaaggccactgtctcctgcctgcccctgggaactgaatgtctcggtataaaacccgactgtacatttgttcaattctgagataggagaaaaaccgccctatggtgggaggcgagacatgttggcagcaatgctgccttgttattctttaccccgctgagatgtttgggtggagagaaacatcaatctggcttacgtgcacgtccaggcatagtaccttcccttgaacttaatgacatcatacattcttttgctcacatgttttttgctgac-----ctcactatcaccctgctctcctactacattcctttttgctgaaataatgaagataataatcaataaaaactgagggaactcagaggccggtgccggtgcaggtccttggtgtgctgagcgccggtcccctgggcccactgttgtttctctatactttgtctctgtgtcttatttcttttctcagtctctcgtcccacccgactagaaatacccacaggtgtggaggggctggccaccccttca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924708 531 + 60714840 cagtcgagatagaggaaggccactgtctcctgcctgcccctgggaactgaatgtctcggtataaaacccgattgtacatttgttcaattctgagatagaagaaaaaccgccctatggtgggaggcgggacatgtttgcagcaatgctgccttgttattctttactccgctgagatgtttgggtggagagaaacataaatctggcctacgtgcacgtccaggcatattaccttcccttgaacttaattatgacatagattcttttgctcac--gttttttgctgaccttctcttattatcaccctgctctcctactacattcctttttgctgaaataatgcagataataatcaataaaaactgagggaactcagaggccggtgccggtgcaggtccttggtgtgctgagtgccagtcccctgggcccactgttgtttctctatactttgtctctgtgtcttatttcttttctcagtctctcgtcccacccgagtagaaatacccacaggtgtggaggggcaggccaccccttca i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e calJac3.chr22_GL285922_random 62097 385 + 138250 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e macFas5.chr19 55859936 308 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=337190.000000 s hg38.chr19_GL949747v2_alt 705891 696 + 729520 caggcgtggtggtgcacacctgtaatctcagctactcagggggctgaggcacgagaattgcttgaacctggaaggcggaggttgcagtgagtcgaaatggtgccagcctgggcaacagagcgagactctgtctcaaaaaaaTTTAAATTTAAATTTAAAATGCCCGCtgcacgagattcccaaggctgctgtacgcattaccacagacttagtggcttaaaaccacataagtgcatcctcctccagttcggcaggtcaagagtccaaaacatgtctcactggaataaatcaaggtattggtagagtcaggttccttctggaggctctagggaagaatccacttccagctcctacagaccgccacattcctccactcttggccccgcctccatcttcaacctgcatcctcactggaacctctccttta--------------------tttatttatttatttacttatttatttttgagacagagtctcgctctgtcgcccaggctggagtgcagtggctcaatctca-gctcactgtaaccttcgcctcacaggttcaagcgattctcctgccttagcctcctgagtggctgggattacaggcacatgccaccacacctggctaatttcttttgtatttttagtagagacagagttttaccacgttggtcaggctggtctcgaactcctgaccttgtgatccgcctgccttggcct s panTro4.chr19 59973490 691 + 63644993 caggcgtggtggtgcacacctgtaatctcagctactcagggggctgaggcacgagaattgcttgaacctggaaggcggaggttgcagtgagtcgaaatggtgccagcctgggcaacagagcgagactctgtctcaaaaaaaTTTAAATTTAAATTTAAAATGCCCGCtgcatgagattcccatggctgctgtatgcattaccacagacttagtggcttaaaaccacataagtgcatcctcctccagttcggcaggtcaagagtccaaaataggtctcactggaataaatcaaggtattggtagagtcaggttccttctggaggctctagggaagaatccacttccagctcctacagaccgccacattcctccactcttggccccgcctccatc-tcaacctgcatcctcactggaacctctcc------------------------tttatttatttatttacttatttatttttgagacagagtctcgctctgtcgcccaggctggcgtgcagtggcacaatctca-gctcactgtaaccttcgcctcacaggttcaagcgattctcctgccttagcctcctgagtggctgggattacaggcacatgccaccacacctggctaatttcttttgtatttttagtagagacagagttttaccatgttggtcaggctggtctcgaactcctgaccttgtgatccgcctgccttggcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56925239 692 + 60714840 caggcgtggtggcgcacacctgcaatctcagctactcagggggctgaggcacgagaattgcttgaacctggaaggtggaggttgcagtgagtcgaaatggtgccagcctgggcaacagagcgagactctgtctcaaaaaaaTTTAAATTTAAATTTAAAATGCCCGCtgcatgagattcccatggctgctgtacgcattgccacaaacttagtggcttaaaaccacataagtgcatcctcctccagttcggcaggtcaagagtccaaaatacgtctcactgggataaatcaaggtattggcagagtcaggttccttctggaggctctaggggagaatccacttccagatcctacagaccaccacattcctccactcttggccccgcctccatcttcaaactgcatcctcactggaaccgctcc------------------------ttTATTGATTGATTGAttt-tttttttttgagacagagtcttgctctgtcgcccaggctggagtgcagtggcacgatctcatgctcatggtaaccttcgcctcacaggttcaagcgattctcctgccttagcctcctgagtggctgggattactggcacatgccaccacacctggctaatttcttttgtatttttagtagagatggagttttaccacgttggtcaggctggtctctaacgcctgaccttgtaatctgcctgccttggcct i ponAbe2.chr19 C 0 I 373 s macFas5.chr19 55860244 711 + 59248254 caggcatggtggtgcacacctgtaatc-cagctactccagggactgaggcacgagaattgcttgaacccggaaggcgggggttgcagtgagtcaaaatggcgccagcctgggcaacagggtaagacgccgtctcaaaaaaaTTTTAATTTAAATTTAAAATGCCCACtgaatgagatttccgcggctgctgtacacattaccacaaacttagtggcttaaaaccacgtaagtgcatcctcctacagttctttaggtcaagagtccaaaatacgtctcactggaataaatcaaggtattggcagagtcaggttccttctggaggctctaggggagaatccatttccagctcctacaaatcgccacattcctccactcctggccccgcctccatcttcaaaccgcataatcactggaacctctcctttatttatttttatttttttatttttatttatttatttatttattta-ttttgagacggagtctcactctgtctcccaggctggagtgcagtggcccgatctcg-actcactacaacctccgcctcccgggttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggcgtccaccaccacccccggctaat---ttttgtatttttagtagagacgggatttcaccatattggccaggctggtctcgaactcctgaccttgtgatccgcccgcctcagcct i macFas5.chr19 I 308 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e calJac3.chr22_GL285922_random 62097 385 + 138250 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=9813.000000 s hg38.chr19_GL949747v2_alt 706587 38 + 729520 cccaaagtgctgcgattacaggcgtgagccaccacacc s panTro4.chr19 59974181 38 + 63644993 cccaaagtgctgcgattacaggcgtgagccaccacacc i panTro4.chr19 C 0 C 0 s macFas5.chr19 55860955 38 + 59248254 cccaaagtgctgggattacaggcgcgagccaccgcgcc i macFas5.chr19 C 0 I 711 e canFam3.chr1 20137241 1695 - 122678785 I e ponAbe2.chr19 56925931 373 + 60714840 I e calJac3.chr22_GL285922_random 62097 385 + 138250 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=382.000000 s hg38.chr19_GL949747v2_alt 706625 4 + 729520 caac s panTro4.chr19 59974219 4 + 63644993 caac i panTro4.chr19 C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e ponAbe2.chr19 56925931 373 + 60714840 I e calJac3.chr22_GL285922_random 62097 385 + 138250 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e macFas5.chr19 55860993 711 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=20196.000000 s hg38.chr19_GL949747v2_alt 706629 88 + 729520 aacctctccttctatcttccatctcccctctgactgagcctcctgctccctcttataaggaccctataagactacaaggcaggaccgg s panTro4.chr19 59974223 88 + 63644993 aacctctccttctatcttccatctcccctctgactgagcctcctgctccctcttataaggaccctataagactacaAGGCTGGACTgg i panTro4.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 62482 88 + 138250 aacctctccttctggcttcctcctgccctctgactgagcctcctgctccctcacataaggaccttataagactacaaagtaggccgtg i calJac3.chr22_GL285922_random I 385 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e ponAbe2.chr19 56925931 373 + 60714840 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e macFas5.chr19 55860993 711 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=5151.000000 s hg38.chr19_GL949747v2_alt 706717 8 + 729520 cacagtgc s panTro4.chr19 59974311 8 + 63644993 cacagtgc i panTro4.chr19 C 0 C 0 s macFas5.chr19 55861704 8 + 59248254 catggtgg i macFas5.chr19 I 711 C 0 s papAnu2.chr19 47951369 8 + 51301725 cacggtgg i papAnu2.chr19 I 2054 C 0 s calJac3.chr22_GL285922_random 62570 8 + 138250 cacggtgg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e ponAbe2.chr19 56925931 373 + 60714840 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=80183.000000 s hg38.chr19_GL949747v2_alt 706725 69 + 729520 ctcacacctgtaatcccagcactttgggaggccaagacaggaggatcacttgaggtcaggagttcgaga s panTro4.chr19 59974319 69 + 63644993 ttcacacctgtaatcccagcactttgggaggccaaggcgggaggatcacttgatgtgaggagttcgaga i panTro4.chr19 C 0 M 543 s ponAbe2.chr19 56926304 69 + 60714840 ctcacacctgtaatcccagcactttgggaggccaaggcggcaggatcacttgaggtcaggagttcgaga i ponAbe2.chr19 I 373 C 0 s macFas5.chr19 55861712 69 + 59248254 ctcatgcctgtaaccccagcactttgggaggccgaggtgggcagatcacctgtggtcaggagttcgaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47951377 69 + 51301725 ctcatgcctgtaaccccagcactttgggaggccgagatgggcagatcacctgtggtcaggagttcaaga i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 62578 69 + 138250 ctcacacctgtaatcccagcactttgggaggccgaggtgggaggatcgcttgaggtccggagtttgaga i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=19547.000000 s hg38.chr19_GL949747v2_alt 706794 57 + 729520 ccagc--catggccaacatgctgacaccccatctctactaaaaatacaaaaatt-agcag s ponAbe2.chr19 56926373 57 + 60714840 ccagc--catggccaacatgctgacaccccatctctactgaaaatacaaaaatt-agcag i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55861781 53 + 59248254 ccaacagcctgaccaacatggagaaatctcatgc------aaaatacaaaatta-gccag i macFas5.chr19 C 0 I 6 s papAnu2.chr19 47951446 53 + 51301725 ccaacagcctgaccaacatggagaaatctcatgc------aaaatacaaaatta-gccag i papAnu2.chr19 C 0 I 6 s calJac3.chr22_GL285922_random 62647 48 + 138250 ------------ccaaaatgctgacagcccacttctcctaaaaatacaaaaattgggccg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e rheMac3.chr19 60702557 3619 + 64156825 I e panTro4.chr19 59974388 543 + 63644993 M a score=137688.000000 s hg38.chr19_GL949747v2_alt 706851 250 + 729520 ggcttggtggtgcacgcctgtagagtcagctactcgggaggctgaagtgggaggaccacctgagcccagggagggtgaggctgcagtgagctgtgacagcatgactgcactccagcctgggtgaca--gagagaccctgtctccaaaaaaaaaaaaagactacatgataatcataagatccttcacttggccgggcacggtggctcacgcctgtaaccccagcactttgggaggccaagg--------tggccagatccc s panTro4.chr19 59974931 247 + 63644993 ggctcggtggtgcacgcctgtagcgtcagctactcgggaggctgaagtgggaggaccacctgagcccagggagggtgaggctgcagtgagctgtgacagcatgactgcactccagcctgggtgaca--gagagaccctgtctccaaaaaaaaaa---gaCTACATGATAATCATAAGATCCTTCACTTggccgggcacagtggctcacgcctgcaaccccagcactttgggaggccaagg--------tggccagatccc i panTro4.chr19 M 543 C 0 s ponAbe2.chr19 56926430 245 + 60714840 ggcttggtggtgcacacctctagactcaactactcgggaggctgaggtgggaggaccacctgagccccgggaggttcaggctgcagtgagctgtgacagcatgactgcactccagcctgggtgaca--gagagaccctgtctccaaaaaaaa-----gaCTACATGATAATCATAAGATCCTTCACTTggccgggcatggtggctcacgcctgtaaccccagcactttgggaggccaagg--------tgggcagatcac i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55861840 201 + 59248254 ggcacggtggctcatgcctgtagtcccagcactttgggaggccaaggagggctgatcac--gaggtcaggaga--------------------------------tccagaccatcctggctaacacggtgaaaccctgtctctactaaaaa--------tacaaaa-----------------aattagctgggcgtggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcaggaaccc i macFas5.chr19 I 6 I 43 s papAnu2.chr19 47951505 201 + 51301725 ggcacggtggctcatacctgtagtcccagcactttgggaggccaaggcgggctgatcac--gaggtcaggaga--------------------------------tccagaccatcctggctaacacgatgaaaccctgtctctactaaaaa--------tacaaaa-----------------aattagctgggcgtagtggcgggcgcctgtagtcccagccactcaggaggctgaggcagaagaatggcatgaaccc i papAnu2.chr19 I 6 I 11 s calJac3.chr22_GL285922_random 62695 194 + 138250 ggctcagtggctcacgcctgtaatcccagcactttgggaggttgaggccagtggatcacctgaggtcaggagt--------------------------------tcaggaccagcctgtccaacatggtaaggccccgtctctagtaaata--------tacaaa------------------aattagctgggcgtggtggtgggcgcctgtaatctcagttactcaagaggctgaggcaggagaattgc-------- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=5297.000000 s hg38.chr19_GL949747v2_alt 707101 20 + 729520 ctttggtcgggagctcaaga s panTro4.chr19 59975178 20 + 63644993 ctttggtcgggagctcaaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56926675 20 + 60714840 ctttggtcgggagctcaaga i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47951717 17 + 51301725 ctt--gcagtgagc-cgaga i papAnu2.chr19 I 11 I 16 s calJac3.chr22_GL285922_random 62889 20 + 138250 ttgaacccaggaggtagagg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e macFas5.chr19 55862041 43 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=19996.000000 s hg38.chr19_GL949747v2_alt 707121 45 + 729520 -------------------------------ccagcctgaccaac-atggagaaacctcgtctc---tactaaaaataca s panTro4.chr19 59975198 45 + 63644993 -------------------------------ccagcctgaccaac-atggagaaacctcgtctc---tactaaaaataca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56926695 45 + 60714840 -------------------------------ccagcctgaccaac-atggagaaacctcgtctc---tactaaaaataca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55862084 41 + 59248254 -------------------------------ccagcctgggggat-acagccagactccatctc-------aaaaaaaaa i macFas5.chr19 I 43 I 2 s papAnu2.chr19 47951750 48 + 51301725 -------------------------------ccagcctgggggac-agagcgagactccatctcaaaaaaaaaaaaaaaa i papAnu2.chr19 I 16 I 2 s calJac3.chr22_GL285922_random 62909 69 + 138250 ctgcagtgagctgagatcgcgccactgcactccagcctgggcaacaacagcaaaacttcatcta---------aaata-- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=138151.000000 s hg38.chr19_GL949747v2_alt 707166 88 + 729520 aaattagacaggcgtggtggcacatgcctgtaatcccagctactcaggaggctgaggccggacaatcgcttgaaccc-gggaggtggag s panTro4.chr19 59975243 88 + 63644993 aaattagacaggcgtggtggcacatgcctgtaatcccagctactcaggaggctgaggccggacaatcgcttgaaccc-gggaggtggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56926740 88 + 60714840 aaattagacaggcgtggtggcacgtgcctgtaatcccagctactcaggaggctgaggccggacagtcgcttgaaccc-gggaggtggag i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55862127 88 + 59248254 aaattagccaggcgtggtggcacatgactgtaatcccagctactcgggaggttgaggccggagaattgcttgaaccc-gggaggcggag i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47951800 88 + 51301725 aaattagccaggcgtggtggcatatgcctgtaatcccagctacttgggaagttgagggcggagaattgcttgaaccc-gggaggcggag i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47651594 88 + 50890351 aaattagccaggcatggtggcacatgcctgtaatcccagctactcgggaggttgaggctggagaattgcttgaaccc-gggaggcggag i chlSab2.chr6 I 1937 C 0 s calJac3.chr22_GL285922_random 62978 87 + 138250 --attagcagggcatagtgatacacacctgtagactcagctattcgggaggctgaggtaggaagatcacctgagcccagggaggttgag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e nomLeu3.chr10 103394374 1720 - 106955855 M e rheMac3.chr19 60702557 3619 + 64156825 I a score=340447.000000 s hg38.chr19_GL949747v2_alt 707254 175 + 729520 gttgtggtgagccgaggtcgtgccattgcactccagcctgggcaacaacagcgaaactctgtctcaaaaaaaaaaaa----------------------gatgcttcacttaacacatcagcgagaacctctgacacgtgaggtaatgtcgtcacaccttccgaggattaggacgtggacccctctacggagtcacg s panTro4.chr19 59975331 177 + 63644993 gttgtggtgagccgaggtcgtgccattgcactccagcctgggcaacaacagcgaaactctgtctcaaaaaaaaaaaa--------------------aagaTGcttcacttaacacatcagcgagaacctctgacacgtgaggtaatgtagtcacaccttccgaggattaggacgtggacccctctacggagtcacg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56926828 176 + 60714840 gttgcggtgagccaaggttgtgccattgcactccagcctgggcaacaacagtgaaactttgtctcaaaaaaaaaaaa---------------------agatccttcacttaacacatcagcaagaacctctgacacgtgaggtaatgtagtcacacgttccgaggattaggacgtggacccctctacggagtcacg i ponAbe2.chr19 C 0 I 874 s nomLeu3.chr10 103396094 180 - 106955855 gttgcggtgagccaaggtcgtgccatcgcactccagcctgggcaacaacagcgaaactctgtctcaaaaaaaaaaaaaaa-----------------aagatccttcacttaacacatcagcaagaacctctcacacgtgaggtaatgtagtcacacgttctgaggattaggacgtggacccctctgcggagccagg i nomLeu3.chr10 M 1720 C 0 s macFas5.chr19 55862215 174 + 59248254 tctgtggtgagccaaggtagcgccattgcgctccagcctgggcaacaagagcaaaattccgtctc-aaaaaaaaaaa----------------------gatccttcacttaacacatcagcaagaacctctgacacctgaggtaatgtagtcacaggttccgaggattaggacgtggacccctctgtggagccatg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47951888 173 + 51301725 tctgtggtgagccaaggtcgGGCtaccgcgctccagcctgggcaacaagagcaaaactccgtctc--aaaaaaaaaa----------------------gatccttcaCTTAACACATCAGCAAGAACCTCTGACACCTGAGGTAATGTAGTCACAGGTTCCGAGGATTAGGACGTGGACCCCTCAGTGGAGCCATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47651682 172 + 50890351 tctgtggtgagccaaggtcgggctactgtgctccagcctgggcaacaagagcaaaactccttctc---aaaaaaaaa----------------------gatccttcacttaacacatcagcaagaacctctgacacctgaggtaatgtagtcacaggttccgaggattaggacgtggacccctctgtggagccatg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 63065 193 + 138250 actgcagtgagctgtgacagcgtgactgcattccagcctgagcgac---agagagaccctgtctcaaaaggaaaaaaaaagcctacatgataatcataaggtccttcacttaacacatcagcaagaccctctgatgctcgaggtaatgtagtcacgagtacc-aggactgggacgtggacacctctccagagccgtg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=318298.000000 s hg38.chr19_GL949747v2_alt 707429 161 + 729520 actctgcccaccacaCCCATGTCCCACAGAGGCTAACGCTGGCAACAAGATAGTGTCCAGCAACAGGAGGCTGAGCAGGTAA-ACAGCACTGCACCCACAGGAGAGAAGGGCACCATGCAATACAGTGGCCACCAGCCACAGA-----------------------------------GGCTAATTTTTAAGAAAGT s panTro4.chr19 59975508 161 + 63644993 actctgcccaccacaCCCATGTCCCACAGAGGCTAACGCTGGAAACAAGATAGTGTCCAGCAACAGGAGGCTGAGCAGGTAA-ACAGCACCGCACCCACAGGAGAGAAGGGCACCATGCAATACAGTGGCCACCAGCCACTGA-----------------------------------GGCTACTTTTTAAGAAAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56927878 161 + 60714840 actctgcccaccacaCCCATGTCCCACAGAGGCTAACACTGGAAACAAGGCAGTGTCCAGCAACAGGAGGCTGAGCAGGTAA-ACAGCACTGCACCCACAGGAGAGAAGGGCACCATGCAATACAGCGGCCACCAGCCACTGA-----------------------------------GGCTAATTTTTAATAAAGT i ponAbe2.chr19 I 874 C 0 s nomLeu3.chr10 103396274 160 - 106955855 actctgcccaccacaCCCATGTCCCACAGAGGCTAACGCTGGAAACAAGACAGTGTCCAGCAACAGGAGACTGGGCAGGTAA-ACAGCACTGCACCCACAGGAGAGAAGGGCACCATGCAATACAGTGGTCACCAGCCACTGA-----------------------------------GGCTAATTTTTAAGAAAG- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55862389 169 + 59248254 actctgcccaccacaCCCATGTCCCACAGAGGCTAATGCTGGAAACAAGCCAGTCTCCAGCAACAGGAGGCTGAGCAGGTTA-ACAGCACTGCACCCACAGGACAGAAGGGCACCATGCAATACAGTGTCCACCAGCCACTAATTTTTTAAGTAAAAAA---------------------------TTTAAGTAAGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47952061 178 + 51301725 ACTCTGCCCACCACACCCATGTCCCACAGAGGCTAATGCTGGAAACAAGCCA---TCCAGCaacaggaggctgagcaggtaACACAGCACTGCACCCACAGGACAGAAGGGCACCATGCAATACAGTGTCCACCAGCCactaattttttaagtaaaaaaaattagttt----------------tttttaagtaagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47651854 196 + 50890351 actctgcccaccacaCCCATGTCCCACAGAGGCTAATGCTGGAAACAAGCCAGTTTCCAGCAACAGGAGGCTGAGCAGGTAC-ACAGCACTGCACCCACAGGAGAGAAGGGCACCATGCAATACAGTGTCCACCAGCCACTAATTTTTTAAGTAAAAAAAATTAGTTTTACTTAAAAAAACTAATTTTTAAGTAAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 63258 158 + 138250 actctgcccaccacaCCCATGTCCCACGGAGGCTAATGCTGGAAATAC-ACAATATCCAGCAACAGGGGGCTGAGCAGATCA-GCAGCACAG--CCCACAGGAGACACAAACTGCAGGACACACAGTGGCCACCCGCCACTGA-----------------------------------GGCTTATTTTTAAATAAGT i calJac3.chr22_GL285922_random C 0 I 134 e canFam3.chr1 20137241 1695 - 122678785 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=11919.000000 s hg38.chr19_GL949747v2_alt 707590 7 + 729520 TTAAATT s panTro4.chr19 59975669 7 + 63644993 TTAAATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56928039 7 + 60714840 TTAAATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103396434 6 - 106955855 -TAAACT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55862558 7 + 59248254 TTAAATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47952239 7 + 51301725 ttaAATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47652050 7 + 50890351 TTAAATT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e calJac3.chr22_GL285922_random 63416 134 + 138250 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=653960.000000 s hg38.chr19_GL949747v2_alt 707597 319 + 729520 AAGTAggctgggcgaggtggctcacgtctgtaatcccagcacttt-ggaggccgaggcaggcggatc------acctgagg-----gcaggtgtttgagaccag---------------------cctggccaacatggc-aaaaccccgtctct-----gcgaaaaatacaaaaattagccgggcgtggtggcgcacgtgtgatctcagctcctggggacgccaaggtgggaggatcacctgagcccaggaggtcaaggctgcagtgagccaagatcgcgccactgcactccagcctgggcgacagagccagattctgccttt-aaaaataaacgaacaaataaataaTACAAAACAA s panTro4.chr19 59975676 319 + 63644993 AAGTAggctgggcgaggtggctcacgtctgtaatcccagcacttt-ggaggccgaggcaggcggatc------acctgagg-----gcaggtgtttgagaccag---------------------cctggccaacatggc-aaaaccccgtctct-----acgaaaaatacagaaattagccgggcgtggtggcgcacctgtgatctcagctcctggggacgccaaggtgggaggatcacctgagcccaggaggtcaaggctgcagtgagccaagatcgcgccactgcactccagcctgggcgacagagccagattctgccttt-aaaaataaacgaacaaataaataaTACAAAACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56928046 320 + 60714840 AAGTAggctgggcgaggtggctcacgtctgtaatcccagcactctgggaggccgaggcgggcgaatc------acctgagg-----gcaggtgtttgagaccag---------------------cctggccaacatggc-aaaaccccgtctct-----actaaaaatacaaaaattagccgggcgtggtggcgcacctgtggtctcagctcctggggacgctaaggtgggaggatcacctgagcccaggaggtcaaggctacagtgagccaagatcgcgccaccgcactccagcctgggcgacagagccagattctgccttt-aaaaataaacgaacaaataaataaTACAAAACAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103396440 319 - 106955855 AAGTAggctgggcgaagtggctcacacctgtaatcccagcactctgggaggccgaggcgggcggatc------acccgagg-----gcaggtgtttgagaccag---------------------cctggccaacatggc-aaaaccccgtctct-----actaaaaatacaaaaattagccgggcgtagtggcgcgcctgtggtctcagctcctggggacgctaaggtgagaggatcacctgagcccaggaggtcaaggctgcagtgagccaagatcgcgccaccgcactccagcctgggtgacagggccagattctgccttt-aaaaat-aacgaacaaataaataatacaaaACAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55862565 317 + 59248254 AAGAAggccgggcgaggtggctcacgtctgtaatccctgcactttgcgaggccaaggcgtgcggatc------acctgagg----cgcaggtgtttgagaccag---------------------cctggccaacatggcaaaaaccctgtctct-----cctaaaaaaacaaaaattagccgggcgtggtggcgcacctgtggtctcagctcctggggacgctcaggtaggaggatcacctgagcccaggaggacaaggctgcagtgagccaagagcgcgccactgcactccaggctgggcgccagagccagatgctgccttt-aaaaataaacgaacaaataaataaT-----ACAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47952246 319 + 51301725 AAgaaggccgggcgaggtggctcacgtctgtaatccctgcactttgggaggccgaggcgggcggatc------acctgagg----cgcaggtgtttgagacaag---------------------cctggcaaacatggc-aaaaccccgtctct--aaaaaaaaaaaaacaaaaattagccgggcgtggtggcgcacctgtagtctcagctcctggGGActctcaggtgggaggatcacctgagcccaggaggttaaggctgcagtgagccacgagcgcgccactgcactccaggctgggcaacagagccagattctgccttt-aaaaataaacgaacaaataaataat-----acaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47652057 317 + 50890351 AAGAAggccgggcgaggtagctcacgtctgtaatccctgcactttgggaggccgaggcgggcggatc------acctgagg----ggcaggtgtttgagaccag---------------------cctggccaacatggc-aaaaccccgtctct-----actaaaaaaacaaaaattagccgggcgtggtggcgcacctgtggtctcagctcctggggacgctcaggtgggaggatcacctgagcccaggaggacaaggctgcagtgagccaagagcgcgccactgcactccaggctgggcgccagagccagattctgcctttaaaaaataaacgaacaaataaataaT-----ACAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 63550 341 + 138250 aaattagccaggcgtcgtggcagaggcctgtagtcccagctattcaggagaatgaggcagaaaaaccgatttaacctgggagggtcggaggttgcagtgaccggagatcgtgccactgcactccacctgggtgacagaac-aagactccgtctcaaaaaaaaaaaaaaaaaaaaaattagccgggcgtggtggcgcacctgtggtctcagctcctggggacgctaaggtgggaggatcacctgaatccaggtgggcaaagct-------gccgagaccgcgccactgcactccagcctgggtgacagagccagattctgcctct-aaaactaaatgaacaaataaataat--------- i calJac3.chr22_GL285922_random I 134 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=1074976.000000 s hg38.chr19_GL949747v2_alt 707916 453 + 729520 CAAAATAAAGAGTTT-AAAAGTCTGGAAGGAAAGCAACATTTACAAGGGCCCAGGCTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCCGGCCAGA---GCGCAGGTTTGCCCCACTCCGGGCGGGCACTGCGGGTCGGGAGCTACGGGGCCTGGACCCGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGCCTTCCCGGCCCCTGCGCTGGGGGCCCGCCTTGACCGCGCACGCGGGGCTAGAATGTACTCACTTGAGCAGCACGGCGGCGCCTGCTACCGTGCCCAGCGCCGACAGCGGCAGCAGGTAGCGGCTCATGCCGGGCCGGGGACAGGCGTCAGGCGTCAGGGGTCGGCGCGGAGCTTGCTGCACACCAGCCGCCTGGGTAGCTCCGAGGAAGAGCGCGCGACGCAGCCACAGGCGAGCGGAGGCGCAGGCGCGGCTGGGCCCGCG s panTro4.chr19 59975995 446 + 63644993 CAAAATAAAGAGTTT-AAAAGTCTGGAAGGAAAGCAACATTTACAAGGGCCCAGGCTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCCGGCCAGA---GCGCAGGTTTGCCCCACTCCGGGCGGGCACTGCGGGTCGGGAGCTACGGGGCCTGGACCCGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGCCTTCCCGGCCCCTGCGCTGGGGGCCCGCCTTGACCGCGCACGCGGGGCTAGAATGTACTCACTTGAGCAGCACGGCGGCGCCTGCTACCGTGCCCAGCGCCGACAGCGGCAGCAGGTAGCGGCTCATGCCGGGCCGGGGACAGGCGTCAGG-------GGTCGGCACGGACCTTGCTGCACACCAGCCGCCTGGGTACCTCGGAGGAAGAGCGCGCGACGCAGCCACACACGAGCGGAGGCGCAGGCGCGGCTGGGCCCGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56928366 446 + 60714840 CAAAATAAAGAGTTT-AAAAGTCTGGAAGGAAAGCAACATTTACAAGGGCCCAGGCTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCTGGCCAGA---GCGCAGGTTTGCCCCACTCCGGGTAGGCACTGCGGGTCGGGAGCTACGAGGCCTCGACCCGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGCCTTCCCGGCTCCTGCTCTGGGGGCCCGCCAGGACGACGCACGCGGGGCTAGAATGTACTCACTTGAGCAGCACGGCGGCGCCTGCTACCGTGCCCAGCGCCGACAGCGGCAGCAGGTACCGGCTCATGCCGGGACGGGGACAGGGGTCAGG-------GGTCGGCGCGGAGCTTGCTGCACACCAGCCACCTGGGCAGCTCGGAGGAAGAGCGCGCGACGCAAACACACACGAGCCGAGGCGCAGGCGCCGCTGGGACCGCG i ponAbe2.chr19 C 0 I 3 s nomLeu3.chr10 103396759 446 - 106955855 CAAAATAAAGAGTTT-AAAAGTCTGGAAGGAAAGCAACGTTTACAAGGGCCCAGGCTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCCGGTCAGA---GCGCAGGTTTGCCCCACTCCGGGCGGGCCCTGCGGGTCGGGAGCTACGGGGCCTGGACCCGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGCCTTCCCGGCCCCTGCGCGGGGGGCCCGCCTTGACCGCACACGCGGGGCTAGAATGTACTCACTTGAGCAGCACGGCGGCGCCTGCTACCGTGCCGAGCGCCGACAGCGGCAGCAGGTAGCGGCTCATGCCCGGCCGGGGACAGGGGTCAGG-------GGTCGGCGCGGAGCTTGCGGCACACCAGCCGCCTCTGCAGCTCCGAGTAAGAGCGCGCGGCGCAGCCACGCACGAgcggaggcgcaggcgcggctgggcccgcg i nomLeu3.chr10 C 0 I 3 s macFas5.chr19 55862882 446 + 59248254 TAAAATAAAGAGTTT-AAAAGTCTGGAAGGAAAGCAACATTTACAAGGGCCCTGGTTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCCGGCCAGA---GCGCAGGTTTGCCCCACTTGGGGCGGACACTGCCGGTCGGGAGCTGCGGGGGCTGGACCCGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGTCTTCCCTGCCCCTGCGCGGGAGGCCTGCCTAGACCGTGCACGCGGGGCTAGAAGGTACTCACCTGAGCAGCACGGCGGCGCCTGCTAGTGTGCCCAGCGCCGACAGCGGCAGCAGGTAGCGGTTCATGCCGGGCCGGGGACAGGGGTCGGG-------GGTCGAAGCGGAGCTGGTTGCACACCAGCCGCCCCGACCCCTCGGAGGAAGAGCGCGCGGCGCAGCTATCCAcgtgcggaggcgcaggcgcggcggggcccgcg i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47952565 446 + 51301725 taaaataaagagttt-aaaaGTCTGGAAGGAAAGCAACATTTACAAGGGCCCAGGTTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCCGGCCAGA---GCGCAGGTTTGCCCCACTTGGGGCGGACACTGCCGGTCGGGAGCTGCGGGGGCCGGACCCGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGCCTTCCCTGCCCCTGCGCGGGAGGCCTGCCTTGACCGTGCACGCGGGGCTAGAAGGTACTCACCTGAGCAGCACGGCGGCGCCTGCTAGTGTGCCCAGCGCCGACAGCGGCAGCAGGTAGCGGCTCATGCCGGGCCGGGCACACGGGTCGGG-------GGTCGAAGCGGAGCTGGCTGCACACCAGCCGCCCCGGCCCCTCGGAGGAAGAGCGCGCGGCGCAGCCACCCACGTGCGGAggcgcaggcgcggcggggcccgcg i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47652374 446 + 50890351 TAAAATAAAGAGTTT-AAAAGTCTGGAAGGAAAGCAACATTTACAAGGGCCCAGGTTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCCGGCCAGA---GCGCAGGTTTGCCCCACTCGGGGCTGACACTGCCGGTCGGGAGCTGCGGGGGCTGGACCCGGGA--GCGA-----GGGGCGGGGGTCTCCGCCGTCTTCCCTGCCCCTGCGCGGGAGGCCTGCCTTGACCGTGCACGCGGGGCTAGAAGGTACTCACCTGAGCAGCACGGCGGCGCCTGCTAGTGTGCCCAGCGCCGACAGCGGCACCAGGTAGCGGTTCATGCCGGGCCGGGGACAGGGGTCGGG-------GGTCGAAGCGGAGCTGGCTGCACACCAGCCGCCCCGGCCCCTCAGAGGAAGAGCTCGCGGCGCAGCCACCCACGTGCGGAGGCGCAGGCGCGGCGGGGCCCCCG i chlSab2.chr6 C 0 I 3 s calJac3.chr22_GL285922_random 63891 438 + 138250 ------aaaGAGTTTAAAAAGTCTGAAAGGAAAGCAACATTTACAAGGGCCCAGGCTCGCCCTT-CCCTCCGAGTGACCTTGCGCC-GTGACCCGGCCGGCCCGA---GCGCAGGTTTGTCCCATTCC-CGCAGGCAGCGCGGGTCGGGAGCTGCAGAAGCTGCACCTGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGCCTTCCCTGCCCCTGCGCTGGGGGCCCGCCGCGACCGCGCACGCGGGGCTAGAATGTACTCACTTGAGCAGCACGGCGCCGCCTACGACGGTGCCCAGCGCCGACAGCGGCAGCAGGTAGCGGTTCATGCCGGGCCCGGGACGGGGGTCAGT-------GGTCAGCGCGGAGCCGACTTCAGACCCGCCGCCCGGGCAGCTCCG-GGAAGAACGCGAGACGCAGCCAAGCACAAGGGGAAGCGCAGGCGCAGTGGGGCCCACG i calJac3.chr22_GL285922_random C 0 I 3 s canFam3.chr1 20138936 394 - 122678785 CACACTGACAAGCGC-GGAAGTCTGGACCAGCAG----ACTTGCAAGGGCCCGGGCCCGCCCCTGCCCTCGGGGTGACCTTGGGCC-GTGACCTGCCCTCTCGGCCCTTCCTAGGTGTGCCCCCCAC-----------------------GCTGCCTGGACCAGCCCTAGGCTGGCGACCACCGGGGC-GGCCTCTCTCCCGCCCTCC--GCCCACCTgccgggggccagcc-cgcccgccggcgcg---------cgcACTCACCGGAGCAGCACGGCGCCACCCACCGCCGTGCCGAGCACAGACAGCGGTAGGAGGTAGCGGTTCATGCCGGG-------CAGGAGCGGGG-------GTCCGACGCCGAGCCCACCGGAGACCTGCCGCCT-GGTCGCTCCGAG---GAGCTCACGGC-CGGCTTCCCACGTGGGGAAGGACCAGCTCTGC---------- i canFam3.chr1 I 1695 C 0 e rheMac3.chr19 60702557 3619 + 64156825 I a score=1487818.000000 s hg38.chr19_GL949747v2_alt 708369 477 + 729520 TCCGGAACTGGGCT---GCGAGGGGCGGGGCGCGGGCGG-AGGGGGCGGGGATCCTAGGGACGGGACCTATGAGCATCGGTCCTGAGCGCTGTCACAGCTGGGATTGGTGGTTTCAGGAGCCTGTGGGCGTGGCTA-GT-CCGGGGGCGGG-----------GCCTATGGTTTGTTCGAATGACGTCACACTTGCCGCAGCGTATAAGGCGCTACGCAgtt----ctggagt-gaaataggttcgaatcccac--cactgtcaattccagactgtgaccctctgtgtgtctttcaactatatcagcctattccctcatctggaaatgtgtgtt---------taccttcttcatagacttttggagataatttgagaatttccatgcacagAAACAAGGATCTAGTAGCCTGTGGGTACCCAAGCTcctggggtcctgcaggagaaggcggctgggggcctggactcctgggtctgag------------------------------------ggaggaggggctgggggcctggactcctgggt s panTro4.chr19 59976441 475 + 63644993 TCCGGAACTGGGCT---GCGAggggcggggcgcgggcgg-agggggcggggATCCTAGGGACGGGACCTATGAGCATCGGTCCTGAGCGCTGTCACAGCTGGGAGTGGTGGTTTCAGGAGCCTGTGGGCGTGGCTGCGT-CCGGGGGCGGG-----------GCCTATGGTTTGTTCGAATGACGTCACACTTGCCGCACCGTATAAGGCGCTACGCAgtt----ctggagt-gaaataggttcgaatcccac--cactgtcaattccagactgtgaccctgtgtgtgtctttcaactatatcagcctattccctcatctggaaatgtgtgtt---------taccttcttcatagacttttggggataatttgagaatttccatgcacagAAACAAGGATCTAGTAGCCTGTGGGTACCCAAGCTcctggggtcctgcaggagaaggcggctgggggcctggactcctgggtctgag------------------------------------ggaggaggggctgggggcctggactcctg--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56928815 478 + 60714840 TCCGGAACTGGGCT---GCGAggggcggggcgcgggcgg-agggggcggggATCCCAGGGGCGAGACCTATGAGCATCGGTCCTGAGCGCTGTCACAGCTGGGAGTGGTGGTTTCAGGAGCCTGTGGGCGTGGCTGAGT-CCGGGGGCGGA-----------GCCTATGGCTTGTTCGAATGACGTCACACTTGCCGCACCGTATAAGGCGCGACGCAGTT----CTGGGGT-GAAAtaggttcgaatcccat--cactgtcaattccagactgagaccctctgtgtgtctttcaactatatcagcctattccctcatctggaaatgtgtgtt---------taccttcttcatagacttttggggataatttgagaatttccatgcacagAAACAAGGATCTAGTAGCCTGtgggtacccaagctcctagggtcctgcaggagaaggcggctgggggcctggactcctgggtctgag------------------------------------ggaggaggggctgggggcctggactcctgggt i ponAbe2.chr19 I 3 C 0 s nomLeu3.chr10 103397208 475 - 106955855 tccggaactgggct---gcgaggggcggggcgcgggccg-agggggcggggatcccgggggcgggACCTATGAGCATCGGTCCTGAGCGCTGTCACAGCTGGGAGTGGTGGTTTCAGGAGCCTGTGGGCGTGGCTGCGT-CCGGGGGCGGG-----------GCCTATGGTTTGTTCGAATGACGTCACACTTGCCGCACCGTATAAGGCGCGACGCAgtt----ctggagt-gaaataggttcgaatcccac--cactgtcaattccagactgtgaccctctgtgtgtctttcaactatatcagcctattctctcatctggaaatgtgtgtt---------taccttcttcatagacttttggggataatttgagaATTTCCATGCCCAGAAACAAGGATTTAGTAGTCTGtgggtacctaagctcctggggtcctgcaggagaaggcggctgggggcctggactcctgggtctgag------------------------------------ggaggaggggccgggagtatggacttctg--- i nomLeu3.chr10 I 3 C 0 s rheMac3.chr19 60706176 513 + 64156825 TCCGGAACTGGGCT---GCGAggggcggggcgcgggcgg-agggggcggggATCCCAGGGGCCGGACCTATGAGCA-CGGTCCTGAGCGCTGTCACAGCTGGGAGAAGTGGTTTCAGTAGCCTATGGGCGTGGCTACGT-CAGGGGGCGGG-----------GCCTATGGTTTCTTCGAATGACGTCATACTTGCCGCGCCATGTAAGGCGCGTCACAgct----ctggcgt-gaaacaggttcgaatcccac--cactgtcaattccagactgtgaccctctgtgtgtctttcaaatatatcagcctattccttcatctggaaatgtgtgtt---------taccttcttcatagacttttggggataatttgagaatttccatgcacagAAACAAGGATCTAGTAGCctgcgggtacccaagctcctggggtcctgcgggagaaggcagccaggggcctggactcctgggtccgagggaggaggggccgggggcatggactcctgggtccaaggaggaggggctaggggcctggactcctgggt i rheMac3.chr19 I 3619 C 0 s macFas5.chr19 55863331 477 + 59248254 tccggaactgggct---gcgaggggcggggcgcgggcgg-agggggcgggGATCCCAGGGGCCGGACCTATGAGCA-CGGTCCTGAGCGCTGTCACAGCTGGGAGAAGTGGTTTCAGTAGCCTATGGGCGTGGCTACGT-CAGGGGGCGGG-----------GCCTATGGTTTCTTCGAATGACGTCATACTTGCCGCGCCATGTAAGGCGCGTCACAgct----ctggcgt-gaaacaggttcgaatcccac--cactgtcaattccagactgtgaccctctgtgtgtctttcaaatatatcagcctattccttcatctggaaatgtgtgtt---------taccttcttcatagacttttggggataatttgagaatttccatgcacagAAACAAGGATCTAGTAGCCTGTGGGGACCCAAGCTcctggggtcctgcaggagaaggcagctgggggcctggactcctgggtccgag------------------------------------ggaggaggggctaggggcctggactcctgggt i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47953014 477 + 51301725 tccggaactgggct---gcgaggggcgggccgcgggcgg-agggggcggggatcccaggggcgggACCTATGAGCA-TGGTCCTGAGCGCTGTCACAGCTGGGAGAAGTGGTTTCAGGAGCCTATGGGCGTGGCTACGT-CAGGGGGCGGG-----------GCCTATGGTTTGTTGGGATGACGTCATACTTGCCGCGCCATGTAAGGCGCGACACAGCT----CTGGCGT-GAAACAGGTTCGAATCCCAC--CACTGTCAATTCCAGACTGTGACCCTCTGTGTGTCTTTCAAATATATCAGCCTATTCCTTCATCTGGAAATGTGTGTT---------TACCTTCTTCATAGGCTTTTGGGGATAATTTGAGAATTTCCATGCACAGAAACAAGGATCTAGTAGCCTGCGGGTACCCAAGCTCCTGGGGTCCTGCGGGAGAAGGcagctgggggcctggactcctgggtctgag------------------------------------ggaggaggggctcggggcctggactcctgggt i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47652823 445 + 50890351 TCCGGAACTGGGCT---GCGAGGGGCGGGGCGCGGGCGG-AGGGGGCGGGGATCCCAGGGGCGGGACCTATGAGCA-CAGTCCTGAGCTCTGTCACAGCTGGGAGAGGTGGTTTCAGGAGCCTATGGGCGTGGCTACGT-CAGGGGGCGGG-----------GCCTATGGTGTGTTCGAATGACGTCATACTTGCCGCGCCATGTAAGGCGCGAcacagct----ctggcgt-gaaacgggttcgaatcccac--cactgtcaattccagactgtgaccctctgtgtgtctttcaaatatatcagcctattccttcatctggaaatgtgtgtt---------taccttcttcatagacttctggggataatatgagaATTTCCACGCACAGAAACAAGGATCTAGTAGCCTGTGGGTACCCAAGCTcctggggtcctgcgggagaaggcagctgggggcctggactcctgggtccaaa-------------------------------------------------------------------- i chlSab2.chr6 I 3 C 0 s calJac3.chr22_GL285922_random 64332 462 + 138250 TCCGGAAGTGGGCT---GCGAGGGGCGTGGCAAGGGCAG-AGTGGGCGGGGATCCCAAGGGCGAGACCTATGAGCATCGGCCCTGAGCGCAGTCACAGCTGGGAGTGGCGGTTTCAGGAGCATGTGGGCGTGGCCGTGT-CCGAGGGCGGG-----------GCCTACGGTTCGCTCGAACGGCGTCACATTTGCCGCACCGTTTAAGGCGCTCCGCAgct----ctgtagt-gacagaggttcgaatcccac--cactgttaattccagactgcgaccctctgtgtgtctttcaaatatgtcagcctatttcttcatctggaaatgtgtgct---------taccttcttcatagacttttggggataattTGGGAATCTCCATGCTCAGAAACAAGGATCTGGTAGCCTGTGGGTACCCAAGCTTCTgg---------------ggcagctcggatcctggactcct-tgtctgag------------------------------------ggagttgaggactggggcctggactcctgagt i calJac3.chr22_GL285922_random I 3 C 0 s canFam3.chr1 20139330 480 - 122678785 TCCGGGCGGAGGCTTCCGAGAGGGGCGGGGCGTGGACTGCCGGGAGCGGG--------------GGCCCACGAggg-cgggcctcggcgccgcggcggccgggccTGG-GATTTCCGTGGCC-GTGGGCGGGGCCGCGCGCTGGAGGCGGGGCAGGGGCCGAGCCTGCGCACTGTTCCAATGACGTCACGTT---CACGCCGCTCCCGGCGTTCGGCAGGTGCGCCTGGGTTAGAGACCTGCTCCGCCGCCACCGCGCTGCGGCTGGCAGGCTGCGCTCCTCTGCGCG--TTTCAGATTTATCAGCCTGTTCCCACCT---GACGTGCGTGCTCGCCAGTAGTACCTTCCTCGTGGACTACAGGAG--AACTTGAGAATTTCGACACTCGGAAGCCAGGACCTAGTGGCCTCGGGATTCCCAAACTCCTGGGGGCCTGAAGGA---GGAAATCAGGGCGTTAGACTCCTGGGTCTGAG------------------------------------GGAGGAGGGCCTGGGGGCCTGGACTCCtggat i canFam3.chr1 C 0 I 2211 a score=419472.000000 s hg38.chr19_GL949747v2_alt 708846 187 + 729520 ccaagggaggaggggctgggagcatggacttctgggtccgagggaggag-ggccgggtgcctggactgctgagtctgagggaggaggggctgggggcctgATTCATTCCCAAATTATCAGAATCTCATCCCCATGTCTGGCCCTGCACAGAGATATCTTCCCTGAACTCTGCCTGAACTACCTTTCTT s panTro4.chr19 59976916 117 + 63644993 -----------------------------------------------------------------------agtctgagggaggaggggctgggggcctgATTCATTCCCAAATTATCAGAATCTCATCCCCATGTCTGGGCCTGCACAGAGATATCTTCCCTGAACTCTGCCTGAACTACCTTTCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56929293 187 + 60714840 ccaagggaggaggggccaggagcatggacttctgggtccgagggaggag-gggcgggtgcctggactcctgagtctgagggaggaggggctgggggcctgATTCATTCCCAAATTATCAGAATCTCATCCCCATGTCTGGGCCTTTACAGAGATATCTTCCCTGAACTCTGCCTGAACTACCTTTCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103397683 153 - 106955855 ----------------------------------ggtccgacagatgag-gggtgggtgcctggactcctgagtcttagggaggaggggctgggggcctgATTCATTCCCAAATTATCAGAATCTCATCCCCATGTATGGGCCTGCACACAGATATCTTCTGTGAACTCTGCCTGAACTACCTTTCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60706689 186 + 64156825 ccaagggaggaggggccgggggcatggacttctaggtcccagggaggag-ggacaagtgcctggactcctgactcagagggaggaggggctggtggcct-ATTCATTTCCAAATTCTCAGAATCTCATCCCCATGTCTGGCTCTGCACAGAGATCTCTCCCCTGAACTCTGCCGGAACTACCTTTCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55863808 186 + 59248254 ccaagggaggaggggccgggagcatggacttctaggtcccagggaggag-ggacaagtgcctggactcctgactcagagggaggaggggctggtggcct-ATTCATTTCCAAATTCTCAGAATCTCATCCCCATGTCTGGCTCTGCACAGAGATCTCTCCCCTGAACTCTGCCGGAACTACCTTTCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47953491 187 + 51301725 ccaAGGGAGGAGGGGCCGGGGACATGGACTTCTAGGTCCCAGGGAGGAG-GGACAGGGGCCTGGACTCCtaggtctgagggaggaggggctggtggCCTGATTGATTTCCAAATTCTCAGAATCTCATCCCTATGTCTGGCTCTGCACAGAGATGCCTTCCCTGAACTCTGCCGGAACTACCTTTCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47653268 182 + 50890351 -----ggaggaggggccgggggcatggacttctaggtcccagggagaag-ggacaggggcctggactcctgggtctgagggaggaggggctggtggcctgATTGATTTCCAAATTCTCAGAATCTCATCCCTATGTCTGGCTCTGCACAGAGATATCTTCCCTGAACTCTGCCGGAACTACCTTTCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 64794 187 + 138250 ctgaaggaagaggagctgaggtcctggacttctgggtccaagggaggagaggccaggtgtcaggactcctgggcctgagggaggagaggctgagggcccgATTCATTCCCACATTCTCAGAATCTCATCCCAATGTCTGAGCCTGTACAGAGACGTCTTCC-TGAACTCTGCCTAAACtttttttttt i calJac3.chr22_GL285922_random C 0 I 306 e canFam3.chr1 20139810 2211 - 122678785 I a score=10444.000000 s hg38.chr19_GL949747v2_alt 709033 4 + 729520 AGAT s panTro4.chr19 59977033 4 + 63644993 AGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56929480 4 + 60714840 AGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103397836 4 - 106955855 AGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60706875 4 + 64156825 AGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55863994 4 + 59248254 AGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47953678 4 + 51301725 AGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47653450 4 + 50890351 AGAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 64981 306 + 138250 I a score=826360.000000 s hg38.chr19_GL949747v2_alt 709037 290 + 729520 TGAGTATTGCACACACTCCTGCACTTACCTGTCCATGTTTGTCA---CCCCCACCAAACCGGGATGCACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCACAGCGAGTGTATCTGATCACCACCTCCTACCCCTGACTGTGCCTGAGGTGCCAGGAGCAGACACC-GCTGGAAACAGGGAAGAATTCAACCCAA-----TCTAACTAGGAGTAAGTTTTCTTCCTCATCAGATGAACTGTCATCTTCTTATATGAGCCCTGCCATAATGGAGATTATACAGGCAGGAAGAGCTATTTT s panTro4.chr19 59977037 290 + 63644993 TGAGTATTGCACACACTCCTGCACTTACCTGTCCATGTTTGTCA---CCCCCACCAAACCGGGATGCACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCACAGTGAGCGTATCTGATCACCACCTCCTACCCCTGACAGTGCCTGAGGTGCCAGGAGCAGACACC-GCTGGAAACAGGGAAGAATTCAACCCAA-----TCTAACTAGGAGTAAGTTTTCTTCCCCATCAGATGAACTGTCATCTTCTTATATGAGCCCTGCCATAATGGAGATTATACAGGCAGAAGCAGCTATTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56929484 295 + 60714840 TGAGTATTGCACACACTCCTGCACTTACCTGTCCATGTTAGTCA---CCCCCACCAAACCGAGATGCACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCACAGCCAGCATATCTGATCACCACCTCCTACCCCTGACAGTGCCTGAGGTGCCAGGAGCAGACACC-GTTGGAAACAGGGAAGAATTCAACCCAAGTCACTCTAACTAGGAGTAAGTTTTCTTCCCCATCAGATGAACTGTCATCTTCTTATATGAGCCCTGCCATAATGCAGATTACACAGGCAGGAAGAGCTATTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103397840 281 - 106955855 TGAGTATTGCACACACTCCTGCACTCACCTGTCCATGTTTGTCA---CCCCCACCAAACCGGGATGCACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCACAGCGAGCATATCTGATCACCACCTCCTACCCCTGACAGTGCCTGAGGTGCCAGGAGCAGACACC-GCTGGAAACAGGGAAGAATTCAACTTAG--------------GAGTAAGTTTTCTTCCCCATCAGATGAACTGTCATCTTCTTATATGAGCCCTGCCATAATGGAGATTACACAGGCAGGAAGAGCTATTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60706879 295 + 64156825 TGAGTATTGCAGACACTCCTGCACTTACCTGTCCATGTTTATCA---CCCCCACCAAACTGGGATGCACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCAGAGCGAGCATATCTGATTACCACCTCCTACCCCTGACAGTGCCTGAGACTCCATGAGCAGACACT-GCTGGGAACAGGGAAGAATTCAATCCAAGTCACTCTAACTAGGAGTAAGTTTTCTTCCGCATCAGATGAACTGTCATCTTCTTATATGAGTCCTGCCATAATGGAGATTACACAGACAGGAAGAGCTATTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55863998 295 + 59248254 TGAGTATTGCAGACACTCCTACACTTACCTGTCCATGTTTATCA---CCCCCACCAAACTGGGATGCACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCAGAGCGAGCATATCTGATTACCACCTCCTACCCCTGACAGTGCCTGAGACTCCATGAGCAGACACT-GCTGGGAACAGGGAAGAATTCAATCCAAGTCACTCTAACTAGGAGTAAGTTTTCTTCCATATCAGATGAACTGTCATCTTCTTATATGAGTCCTGCCATAATGGAGATTACACAGACAGGAAGAGCTATTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47953682 274 + 51301725 TGAGTATTGCAGACAGTCCTGCACTTACCTGTCCATGTTTATCA---CCCCCACCAAACTGGAATG-------------CTGCTTCCCCTTGCACTGCTCAGA--GAGCATATCTGAT---CACCTCCTACCCCTGACAGTGCCTGAGACTCCAGAAGCAGACACCGGCTGGGAACAGGGAAGAATTCAATCCAAGTCACT----CTAGGAGTAAGTTTTCTTCCGCATCAGATGAACTGTCATCTTCTTATGTGAGTCCCGCCATAATGGAGATTACACAGACAGgaagagctatttt i papAnu2.chr19 C 0 I 954 s chlSab2.chr6 47653454 294 + 50890351 TGAGTATTGCAGACACTCCTGCACTTACCTGTCCATGTTTATCA---CCCCCACCAAACTGGGATACACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCAGAGCGAGCATATCTGATCACCACCTCCTACCCCTGACAGTGCCTGAGACTCCAGGAGGAGACACC-GCTGGGAACAGGGAAGAATTCAA-CCAAGTCACTCTAACTAGGAGAAAGTTTTCTTCCGCATCAGATGAAGTGTCATCTTCTTATGAGAGTCCTGCCATAATGGAGATTACACAGGCAGGAAGAGCTATTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 65287 296 + 138250 TGAGTATCGCAGACACTCCCGCACTTACCTGTCCATGTTTGTTACCCCCCCCCCCAAACCGGGATGCACCTCTGGGCACCTGCTTTCCCTTGCACTGCTCAGAGCAAGCATATTTGATCACCACCTCCTACCCCTGACAGTGTCTGAGGCCCCAGAAGCAGATGCC-GCTGGAAAC--GGAAGAATTCGACCCAAGTCGCTCTGACCAGGAGTAAGTTTTCTTCCCCCTCATATGAACTGTCATCTTCTTACAGGAGTCCTGCCATAATGGAGATTACTCAGGCAGAAAGAGCTATTTT i calJac3.chr22_GL285922_random I 306 C 0 e canFam3.chr1 20139810 2211 - 122678785 I a score=31836.000000 s hg38.chr19_GL949747v2_alt 709327 12 + 729520 AAGACCTTAGTC s panTro4.chr19 59977327 12 + 63644993 AAGACCTTAGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56929779 12 + 60714840 AAGACCTTAGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103398121 12 - 106955855 AAGACCTTAGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60707174 12 + 64156825 AAGACCTTAGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55864293 12 + 59248254 AAGACCTTAGTC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47653748 12 + 50890351 AAGACCTTAGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 65583 12 + 138250 AAGACCTTAGTC i calJac3.chr22_GL285922_random C 0 I 195 e canFam3.chr1 20139810 2211 - 122678785 I e papAnu2.chr19 47953956 954 + 51301725 I a score=238373.000000 s hg38.chr19_GL949747v2_alt 709339 147 + 729520 AATggccgggcacggtggctcacgcctgtaatcccagcactttgggaggccgagacagatggatcacgaggtcaggagattgataccagcctggccaacatggtgaaaccctgtctctactaaaaatac--aaaaattagctggatgtg s panTro4.chr19 59977339 147 + 63644993 CATggccgggcacggtggctcacgcctgtaatcccagcactttgggaggccgagacagatggatcacgaggtcaggagatcgataccagcctggccaacatggtgaaaccctgtctctactaaaaatac--aaaaattagctggatgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56929791 147 + 60714840 CATggccgggcatggtggctcacacctgtaatcccagcactttgggaggccgagacagatggatcacgaggtcaggagatcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatac--aaaaattagctggatgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103398133 137 - 106955855 CATggccgggcacggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggaggatcacgaggtcaggagatcgagac------------cacagtgaaaccccgtctctactaaaaatacaaaaaaattagccgggcgtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60707186 147 + 64156825 CATggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggtggaggtggacggatcacgaggtcaggagatcgagaccatcctagccaacatggtgaaaccctgtctctactaaaaatac--aaaaattagccggttgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55864305 147 + 59248254 CATggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggtggaggtggacggatcacgaggtcaggagatcgagaccatcctagccaacatggtgaaaccctgtctctactaaaaatac--aaaaattagccggttgtg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47653760 145 + 50890351 CATggccggatatggtggttcacacctgtaatcgcagcac-ttgggaggcggaggtggacggatcacgaggtcaggagattgagaccat-ctggccaacatggtgaaaccctgtctttactaaatatac--aaaaattagccggttgtg i chlSab2.chr6 C 0 I 316 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e papAnu2.chr19 47953956 954 + 51301725 I a score=214506.000000 s hg38.chr19_GL949747v2_alt 709486 146 + 729520 gtggcactcacctgtagtcccagctactcag-gaggccgaagcaggagcatcacttgaactcgggaggtggaggttgcagtgagccgagattgccctactgcattccagcct-ggcgacagagtgaaattctgtcaaaaaa--------------------------aa-----aaaaa--------------------------------------- s panTro4.chr19 59977486 146 + 63644993 gtggcactcacctgtagtcccagctactcag-gaggctgaagcaggagcatcacttgaactcgggaggtggaggttgcagtgagccgagattgccctactgcattccagcct-ggcgacagagtgaaattctgtcaaaaaa--------------------------aa-----aaaaa--------------------------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56929938 172 + 60714840 gtggtgctcacctgtagtcccagctactcag-gaggctgaagcaggagaatcacttgaactcacgaggtggaggttgcagtgagctgagattgccctactgcattccagcct-ggcgacagagtgaaattgtgtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaCCAA-----AAAAA--------------------------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103398270 148 - 106955855 gtggcgggcacctgtggtcccagctactcggagaggctgaggcaggagaatggcgggaacccaggaggcggagcttgcagtgagccgagattgcgccactgcactccagcctgggcgacagagcgagactccgtctcaaaa--------------------------aa-----ataaa--------------------------------------- i nomLeu3.chr10 C 0 I 25 s rheMac3.chr19 60707333 169 + 64156825 gtggcgctcccctgtagtccccgctattcag-gaggctgaggcaggagaatcacttgaactcgggaggcaggggttgaagtgagccgagatcgccctactgcattccagcct-ggcgacagagtgaaactctgtcaaaaaa--------------------------aa-----aaaaaagacaa----aa------------aaacaaaaCAAAACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55864452 173 + 59248254 gtgacgctcacctgtagtcccagctattcag-gaggctgaggcaggagaatcacttgaactcgggaggcagaggttgcagtgagccgagatcgccctactgcattccagcct-ggcgacagagtgaaactctgtcaaaaaa--------------------------aa-----aaaaaaaaaaaagacaa------------aaaaaaaaaaaaaCA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47654221 190 + 50890351 gtggcgctcacctgtagtcccagctattcag-gaggctgaggcaggagaatcacttgaactcgggaggcagaggttgcagtgagccgagatcgccctactgcgttccagcct-ggcgacagagtgaaactctgtcaaaaaa--------------------------aaaacccaaaaaaaacaaacacaaacaaaaacaaacaaacaaaaaaaaaca i chlSab2.chr6 I 316 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e papAnu2.chr19 47953956 954 + 51301725 I a score=54224.000000 s hg38.chr19_GL949747v2_alt 709632 40 + 729520 CCTTAGGCCTGTAGACCTTAAGCTCTCACCATCTCAAACG s panTro4.chr19 59977632 40 + 63644993 CCTTAGGCCTGTAGACCTTAAGCTCTCACCATCTCAAACG i panTro4.chr19 C 0 I 760 s ponAbe2.chr19 56930110 40 + 60714840 CCTTAGTCCTGtaaaccttaagctctcaccatctcaaatg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60707502 40 + 64156825 CCTTAGTCCTGTAGACCTTAAGCTCTCACCATCTCAAACG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55864625 40 + 59248254 CCTTAGTCCTGTAGACCTTAAGCTCTcaccatctcaaacg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47654411 40 + 50890351 cCTTAGTCCTGTAGACCTTAAGCTCTCACCATCTCAAACG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e papAnu2.chr19 47953956 954 + 51301725 I a score=32439.000000 s hg38.chr19_GL949747v2_alt 709672 36 + 729520 TATtaaaccagttacacaatgccaaatgctgtataa s ponAbe2.chr19 56930150 36 + 60714840 tattaaaccagttacacaatgccaaatgctgtataa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60707542 36 + 64156825 TATTAAACCAGTTACACAATGACAAATGCTGTATAA i rheMac3.chr19 C 0 I 669 s macFas5.chr19 55864665 36 + 59248254 tattaaaccagttacacaatgacaaatgctgtataa i macFas5.chr19 C 0 I 12 s chlSab2.chr6 47654451 36 + 50890351 TATtaaaccagttacacaatgacaaatgctgtataa i chlSab2.chr6 C 0 I 12 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e papAnu2.chr19 47953956 954 + 51301725 I e panTro4.chr19 59977672 760 + 63644993 I a score=44231.000000 s hg38.chr19_GL949747v2_alt 709708 91 + 729520 gaggcacttggaggagtcaaattcatagagacagaaaac-agagtggtggctgcagggggctg---gagatgagattgggaagtcacaggatttg s ponAbe2.chr19 56930186 95 + 60714840 aaggcacttggagaactcaaattcatagagacagaaaacaaaagtggtggctgcaaggggctgcaagagatgagatggggaagtcacaggatttg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55864713 95 + 59248254 gaggcacttggaggagtcaaattcatagagacagaaaataagagtggtggctgccaggggctggaggagatgagattgggaagtCGCAGGATTTG i macFas5.chr19 I 12 C 0 s chlSab2.chr6 47654499 94 + 50890351 gaggcacttggaggagtcaaattcatagagacagaaaat-agagtggtggctgccaggggttggaagagatgagattgggaagtcaCAGGATTTG i chlSab2.chr6 I 12 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e papAnu2.chr19 47953956 954 + 51301725 I e rheMac3.chr19 60707578 669 + 64156825 I e panTro4.chr19 59977672 760 + 63644993 I a score=2730.000000 s hg38.chr19_GL949747v2_alt 709799 5 + 729520 ttttt s ponAbe2.chr19 56930281 5 + 60714840 ttttt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47954910 5 + 51301725 ttttt i papAnu2.chr19 I 954 C 0 s chlSab2.chr6 47654593 5 + 50890351 TTTtt i chlSab2.chr6 C 0 I 694 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e macFas5.chr19 55864808 0 + 59248254 C e rheMac3.chr19 60707578 669 + 64156825 I e panTro4.chr19 59977672 760 + 63644993 I a score=3678.000000 s hg38.chr19_GL949747v2_alt 709804 18 + 729520 g-tttgtttgtttgttttg s ponAbe2.chr19 56930286 17 + 60714840 --tgttttgttttgttttg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55864808 17 + 59248254 --tttcttgttttgttttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47954915 19 + 51301725 gtttgtttgttttttgttt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e chlSab2.chr6 47654598 694 + 50890351 I e rheMac3.chr19 60707578 669 + 64156825 I e panTro4.chr19 59977672 760 + 63644993 I a score=4730.000000 s hg38.chr19_GL949747v2_alt 709822 6 + 729520 ttttgt s ponAbe2.chr19 56930303 6 + 60714840 ttttgt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55864825 6 + 59248254 ttttgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47954934 6 + 51301725 gtttgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655292 6 + 50890351 ttttgt i chlSab2.chr6 I 694 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e rheMac3.chr19 60707578 669 + 64156825 I e panTro4.chr19 59977672 760 + 63644993 I a score=222802.000000 s hg38.chr19_GL949747v2_alt 709828 219 + 729520 tttttgagagac--agtctcactgtgtcacccaggctggagagcagtgg-gcgatctcagctcactgcaacctctgcctcctaggttcaagcgattctcctgcctcagcctcccgagtagctggggctacaggcacgtgtcaccacacccggctaa-tttttgta-tttttagtagagacggggtttcaccatgttggccaggttggtctcaaactcctgacct s panTro4.chr19 59978432 220 + 63644993 tttttgagacgc--agtcttactctgtcgcccaggctggagcgcagtggcgtgatcttggctcacctcaacctctgcctcccgaattcaagcctttctcctgcctcagcctcccgagttgctgggattacaggtgcccgccaccaagcccaggtaa-tgtttgta-tttttagtagagacgaggtttcaccatgttggccaggctggtctccagctcctgtcct i panTro4.chr19 I 760 C 0 s ponAbe2.chr19 56930309 221 + 60714840 tttTTGAgagacaaagtctcactgcgtcacccaggctggagagcagtgg-gcgatctcagctcactgcaaccttagcctcctgggttcgagcaattctcctgcctcagcctcctgagtagctggggctacaggcacgtgccaccacacctggctaa-tttttgca-tttttagtagagatggtgtttcaccatgttggccagattggactcaaactcctgacct i ponAbe2.chr19 C 0 I 308 s macFas5.chr19 55864831 222 + 59248254 tttttgagagacagagtctcactgcgtcgcccaggctggagtgcagtggcgtgatctcggctcactgcaacctccgccccctgggttcaagcaattctcctgcctcagcctcccgagtagctggggctacaggcgtgcaccaccacacccagctaa-tttttgta-tttttagtagagatggggtttcaccatgttggccaggatggtctcaaactcctgacct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47954940 223 + 51301725 tttttt-gagacagagtctcgctctgtcgcccaggctggagtgcagtggccagatctcagctcactggaagctccatctccggggtttacgccattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccaccttgtccggctagttttttgtattttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655298 222 + 50890351 ttttt--gagacagagtctcgctctgtcgcccaggctagtgtgcagtggccggatctcagctcactgtaagctccgcctctggggtttacgccattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccacctcgccccgctagttttttgtattttttagcagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e rheMac3.chr19 60707578 669 + 64156825 I a score=-4367.000000 s hg38.chr19_GL949747v2_alt 710047 3 + 729520 c--ag s panTro4.chr19 59978652 3 + 63644993 c--ag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56930838 3 + 60714840 c--ag i ponAbe2.chr19 I 308 C 0 s macFas5.chr19 55865053 3 + 59248254 cag-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47955163 1 + 51301725 c---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655520 1 + 50890351 c---- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e rheMac3.chr19 60707578 669 + 64156825 I a score=19507.000000 s hg38.chr19_GL949747v2_alt 710050 11 + 729520 gtgatccacct s panTro4.chr19 59978655 11 + 63644993 gtgatccacct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56930841 11 + 60714840 gtgatccacct i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60708247 11 + 64156825 gtgatccgcct i rheMac3.chr19 I 669 C 0 s macFas5.chr19 55865056 11 + 59248254 gtgatccacct i macFas5.chr19 C 0 I 663 s papAnu2.chr19 47955164 11 + 51301725 gtgatccgccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655521 11 + 50890351 gtgatccgccc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I a score=122083.000000 s hg38.chr19_GL949747v2_alt 710061 72 + 729520 gcctcggccacccaaagtgctgggattacaggcatgagccaccgcacccggcc--gggaagctg-ttttttaata s panTro4.chr19 59978666 72 + 63644993 gcctcggccacccaaagtgctgggattacaggcatgagccaccgcacccggcc--aggaagctg-ttttttaata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56930852 72 + 60714840 gcctcggccacccaaagtgctgggattacaggcatgagccaccgcacctggcc--gggaagctg-ttttttaata i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60708258 74 + 64156825 gtctcggcctcccaaagtgctgggattacaggcttcagctaccgcgcccggccGGgggaggctg-ttttttaata i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55865730 74 + 59248254 gtctcggcctcccaaagtgctgggattacaggcttgagctaccgcgcccggccGGgggaggctg-ttttttaata i macFas5.chr19 I 663 C 0 s papAnu2.chr19 47955175 74 + 51301725 gtctcggcctcccaaagtgctgggattacaggcttgagccactgcacccggccaggggAGGCTG-ttttttaata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655532 75 + 50890351 gtctcggcctcccaaagtgctgggattacaggcttgagtcaccgcgcccggccgggggaggctgtttttttaaca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I a score=86139.000000 s hg38.chr19_GL949747v2_alt 710133 43 + 729520 gatacagagttt--gttttgcaaaat-aaaaaaaagacctgaaggt s panTro4.chr19 59978738 42 + 63644993 gatacagagttt--gttttgcaaaat-aaaaaaa-gacctgaaggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56930924 42 + 60714840 gatacagagttt--gttttgcaaaat-aaaaaaa-gacctgaaggt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60708332 44 + 64156825 gatacagagttt--gttttgcaaaataaaaaaaaagacctgaaggt i rheMac3.chr19 C 0 I 12 s macFas5.chr19 55865804 43 + 59248254 gatacagagttt--gttttgcaaaat-aaaaaaaagacctgaaggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47955249 43 + 51301725 gatacagagttt--gttttgcaaaat-aaataaaagacctgAAGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655607 43 + 50890351 gatacagagttt--gttttgcaaaat-aaaaaaaagacctgaaggt i chlSab2.chr6 C 0 I 12 s canFam3.chr1 20142021 44 - 122678785 ggcacagaatttcagttttgcaagat-gaaaaga-gctctggacat i canFam3.chr1 I 2211 C 0 e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I a score=6938.000000 s hg38.chr19_GL949747v2_alt 710176 11 + 729520 ggacggtggtg s panTro4.chr19 59978780 11 + 63644993 ggacggtggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56930966 11 + 60714840 ggacggtggtg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55865847 8 + 59248254 ---cttttgtg i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47955292 8 + 51301725 ---CTTTTGTG i papAnu2.chr19 C 0 I 4 s canFam3.chr1 20142065 11 - 122678785 ggatggtggtg i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e chlSab2.chr6 47655650 12 + 50890351 I e rheMac3.chr19 60708376 12 + 64156825 I a score=318409.000000 s hg38.chr19_GL949747v2_alt 710187 173 + 729520 atggttgcacaacaatgtgaatatacttaacatcactgaattgtacac-ttaaaatggttaagatggtacattttactttatgcatagtttacca-aactaaaaaTAAAGAAAAATTTTAgactgggcatggtggctcatgcctgtaatcccagcactttgggaggccaaagtgg s panTro4.chr19 59978791 173 + 63644993 atggttgcacaacaatgtgaatatacttaacatcactgaattgtatac-ttaaaatggttaagatggtacattttactttatgcatattttacca-aactaaaaaTAAAGAAAAATTTTAgactgggcatggtggctcatgcctgtaatcccagcactttgggaggccaaagtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56930977 174 + 60714840 atggttgcacaacaatgtgaatatacttaacattactgaactgtacac-ttaaaatggttaagatggtaaattttactttatgcatattttaccacaactaaaaaTAAAGAAAAATTTTAggctgggcatggtggctcatgcctgtaatcccagcactttgggaggccacagtgg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60708388 163 + 64156825 atggttgcacaacaatgtgaatatactcaacactactgaattgcacgc-ttaaaatggttaagatggtaaattttactttatgcatattttaccacaactaaaaGT----AAAAATTTTAggctgggcatggtgg-------cagtaatcccagcactttcggaggccaaagtgg i rheMac3.chr19 I 12 C 0 s macFas5.chr19 55865859 163 + 59248254 atggttgcacaacaatgtgaatatactcaacactactgaattgcacgc-ttaaaatggttaagatggtaaattttactttatgcatattttaccacaactaaaaGT----AAAAATTTTAggctgggcatggtgg-------cagtaatcccagcactttcggaggccaaagtgg i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47955304 163 + 51301725 atggttgcacaacaatgtgaatatactcaacactactgaattgcacac-ttaaaatggttaagatggtaaattttactttatgcatattttaccacaactaaaagt----aaaaattttaggctgggcatggtgg-------cagtaatcccagcactttcggaggccaaagtGG i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 47655662 163 + 50890351 atggttgcacaacaatgtgaatatactcaacgctactgaagtgcacac-ttaaaatggttaagatggtaaattttactttatgcatattttaccacaactaaaaGT----AAAAATTTTAggctgggcacggtgg-------cagtaatcccagcactttcggaggccaaagtgg i chlSab2.chr6 I 12 C 0 s canFam3.chr1 20142076 131 - 122678785 ttagttgcacaacagtgtgaatgtgcttaatgccactgaactgtacactttaaaatgattaagagagtaaattttatgtcttgtgcattttaccataattaaaaaT----AAAGA-------------AGGATgg---------------------------gacgcctgggtgg i canFam3.chr1 C 0 I 157 e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I a score=367728.000000 s hg38.chr19_GL949747v2_alt 710360 199 + 729520 agaatagtatgagcccaggagtttgagagcggcctggacaacacggcaaaaccttatctctacaaaaaa-tacaaaaattagcaggtttggtggcacgcatctgcaccctcagctacttgggaggctgaggtgggaggtctgcttgagcccaggaggtcaaggctatgatgagctgtgattgtgccactgcaccccaggc s panTro4.chr19 59978964 200 + 63644993 agaacagtatgagcccaggagtttgagagcggcctggacaacacggcaaaaccttatctctacaaaaaaatacaaaaattagcaggtttggtggcacgcatctgcaccctcagctacttgggaggctgaggtgggaggtttgcttgagcccaggaggtcaaggctatgatgagccgtgattgcgccactgcaccccaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56931151 199 + 60714840 agaacagtatgagcccaggagtttgagagcggcctggacaacaccgcaaaaccttatctctacaaaaaa-tacaaaaattagcaggtttggtggcacgcatctgcagcctcagctacttgggaggctgaggtgggaggtttgcttgagcccaggaggtcgaggctatgatgagccgtgattgtgccactgcaccccagcc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60708551 199 + 64156825 agaatagcatgagcccagaagtttgagaccagcctggacaacacggcaaaaccttatctctacaaaaaa-tacaaaaattagcaggcttggtggcatgcatctgcggcctcagctacttgggaggctgaggtgggaggattgcttgagcccaggaggtcaaggctatgatgagccgtgattgcgccactgcaccccagcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866022 199 + 59248254 agaatagcatgagcccagaagtttgagaccagcctggacaacacggcaaaaccttatctctacaaaaaa-tacaaaaattagcaggcttggtggcatgcatctgcggcctcagctacttgggaggctgaggtgggaggattgcttgagcccaggaggtcaaggctatgatgagccgtgattgtgccactgcaccccagcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47955467 199 + 51301725 AGAATAgcatgagcccagaagtttgagaccagcctggacaacatggcaaaaccttatctctacaaaaaa-aacaaaaattagcaggcttggtggcatgcatctgcggcctcagctacttgggaggctgaggtgggaggattgcttgagcccaggaggtcaaggctatgatgagctgtgattgtgccactgcaccccagcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655825 199 + 50890351 agaatagcatgagcccagaagtttgagaccagcctggacaacacggcaaaaccttatctctacaaaaaa-tacaaaaattagcagacttggtggcatgcatctgcggcctcagctacttgggaggctgaggtgggaggattgcttgagcccaggaggtgaaggctatgatgagccgtgattgtgccactgcaccccagcc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20142207 157 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I a score=38479.000000 s hg38.chr19_GL949747v2_alt 710559 31 + 729520 tgggtgacagagcaagaccc---catctcaaaaa s panTro4.chr19 59979164 31 + 63644993 tgggtgacagagcaagaccc---catctcaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56931350 31 + 60714840 tgggtgacagagcaagactc---cgtctcaaaaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60708750 29 + 64156825 tgggtgacacagcaagaccc---tgtctcaaa-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866221 29 + 59248254 tgggtgacacagcaagaccc---tgtctcaaa-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47955666 29 + 51301725 tggatgacacagcaagaccc---tgtctcaaa-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656024 29 + 50890351 tgggtgacagagccagaccc---tgtctcaaa-- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20142364 31 - 122678785 taaataatatataaaaatataaataaataaa--- i canFam3.chr1 I 157 C 0 e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I a score=642346.000000 s hg38.chr19_GL949747v2_alt 710590 273 + 729520 taataataataa---------aTGTTTACATTTAAT----AACATGGGCA--ATTGGTTCAGATGTTCATTTTCTCAACCTTG-----AAAAAAAAA----------CAACACTGTTTTTCCC--TGTCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCATTGACTTCCAGGAcagagatc----------------------------------agcaaac-tttttctacaaacagccagatagtaaataatttcagctttgtgatccacacagtggctgttgcacctcctctgccagaggagctgggaagcagccacagatgatgtgaaaa s panTro4.chr19 59979195 273 + 63644993 taataataataa---------aTGTTTAAATTTAAT----AACATGGGCA--ATTGGTTCAGATGTTCATTTTCTCAACCTTG-----AAAAAAAAA----------CAACACTGTTTTTCTC--TGTCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCATTGACTTCCAGGAcagagatc----------------------------------agcaaac-tttttctacaaacagccagagagtaaataatttcagctttgtgacccacacagtggctgttgcacctcctctgccagaggagctgggaagcagccacagatgatgtgaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56931381 280 + 60714840 taataataataa---------aTGTTTAAATTTAAT----AACATGGGCA--ATTGGTTCAGATGTTCATTTTCTCAATCTTGGAAAAAAAAAAAAA----------AAACACTGTTTTTCTCTATGTCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCATTGACTTCCAGGAcagagatc----------------------------------agcaaac-tttttctacaaacagccagatagtaaataatttcagctttgtgacccacacagtgcctgttgcacctactctgccataggagctgggaagcagccatagatgatatgaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103398443 272 - 106955855 taataataataa---------ATGTTTAAATTTAAT----AACATGGACA--ATTGGTTCAGATGTTCATTTTCTCAACCTTG-----AAAAAAA-------------AACACTGTTTTTCTCTATGTCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCATTGACCTCCACGAcagggatt----------------------------------agcaaac-tttttctacaaacagtcagatagtaaataatttcagccttgtgacccacacagtggctgctgcacctactctgccacaggagctgggacgcagccatagatggtatgataa i nomLeu3.chr10 I 25 I 1994 s rheMac3.chr19 60708779 272 + 64156825 -aataataaTGA---------ATGTTTACATTTAAT----AACACGGGCA--ATTGGTTCAGATGCTCATTTTCTCAACCTTG---AAAAAAAAAAA--------------ACTGTTTTTCTCTATATCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCACTGACCTCCAGGAcaggtatc----------------------------------agcaaac-tttttctacgaacagccagatagtaaataatttcagacttgtgacccatacagtggctcttgcacctcctctgccatagtaactgggaagcagtcatagatgatatgaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866250 270 + 59248254 -aataataataa---------aTGTTTAAATTTAAT----AACACGGGCA--ATTGGTTCAGATGCTCATTTTCTCAACCTTG-----AAAAAAAAA--------------ACTGTTTTTCTCTATATCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCACTGACCTCCAGGAcaggtatc----------------------------------agcaaac-tttttctacgaacagccagatagtaaataatttcagacttgtgacccatacagtggctcttgcacctcctctgccatagtaactgggaagcagtcatagatgatatgaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47955695 270 + 51301725 -aataataataa---------atgtttaaatttaat----aaCACGGGCA--ATTGGTTCAGATGCTCATTTTCtcaaccttg------aaaaaaaa--------------actgtttttctctatatctttttctccttttctgtaaaCTGAAATCCTAATATCACTGACCTCCAGGACAGGTATC----------------------------------AGCAAACTTTTTTCTACGAAcagccagatagtaaataatCTCAGACTTGTGACCCATACAGTGGCTCTTGCACCTCCTCTGCCATAGTAACTGGGAAGCAATCGTAGATGATATGAAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656053 284 + 50890351 -aataataataa---------aTGTTTAAATTTAAT----AACACGGGCG--ATTGGTTCAGATGCTCATTTTCTCAACCTTG-----AAAAAAAAAATAAATGAATAAACACTGTTTTTCTCTATGTCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCACTGACCTCCAGGAcagggatc----------------------------------agcaaac-tttttctacaaacagccagatagtaaataatttcagacttgtgacccacacagtggccgttgtacctcctctgccatagtaactggggagcagtcatagatgatatgaaaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20142395 295 - 122678785 taataaaaataaaGAAGGAGGAGGTCTGAAGAGGAGAGAAAACATGGGCACTGTATATTCAGATTCTGGTCCTCACAGCTTTG-----AATAAAGCA-------------------TTTCCTCTCAGCCTTTGTT--------------------TTCTAATATCATCTACCTCAAGGGTAGGGttttcttttttttttttttttttttttttttttttAAGGGTAGG-Gttttctgcaaaggacaggatagtaaataatttcgtcctcgtgggccatatggtccctactgcaactattctgccattatagcaggaaagccaccatagacaagatgcaca i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 65595 195 + 138250 I a score=203527.000000 s hg38.chr19_GL949747v2_alt 710863 79 + 729520 caagtgagca-cagctgtgttcccataaaa--ctttatttat-aaaaataagcagtgcgccacagttcgccagcTCCTGTTTG s panTro4.chr19 59979468 79 + 63644993 caagtgagca-cagctgtgttcccataaaa--ctttatttac-aaaaataagcagtgCCCCACAGTTCGCCAGCTCCTGTTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56931661 79 + 60714840 caagtgagca-tagctgtgttcccataaca--ctttatttac-aaaaataagctgtgggccacagtttgccagcTCCTGTTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103400709 80 - 106955855 caagtgagca-tagctgtgttcccataaaaacttttatttac-aaaaataagcagtgggccACAGTTTACCAGCTCC-ATTTG i nomLeu3.chr10 I 1994 C 0 s rheMac3.chr19 60709051 78 + 64156825 caagtgagca-tagctgtgtt-ccataaaa--ctttattttc-aaaaacaagcagtgggccATAGTCTGCCAGCTCCTGTTTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866520 78 + 59248254 caagtgagca-tagctgtgtt-ccataaaa--ctttattttc-aaaaacaagcagtgggccATAGTCTGCCAGCTCCTGTTTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47955965 79 + 51301725 CAAGTGAGCA-TAGCTGTGttcccataaaa--ctttattttc-aaaaacaagcagtgggccATAGTCTGCCAGCTCCTgtttg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656337 79 + 50890351 caagtaagca-cagctgtgttcccataaaa--ctttattttc-aaaaataagcagtgggccATAGTCTGCCAGCTCCTGTTTG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20142690 74 - 122678785 caaatgagcattagctgtgttctaataaaa--ctttatttacaaaaaataagcaatgggccatagtttgccagcTC------- i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 65595 195 + 138250 I a score=163497.000000 s hg38.chr19_GL949747v2_alt 710942 58 + 729520 Agagtctctctccgatgcccaggctggagcgcagtgatgcaatctcagctcactgcaa s panTro4.chr19 59979547 58 + 63644993 Agagtctgtctccgatgcccaggctggagtgcagtggtgcaatctcagctcactgcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56931740 58 + 60714840 Agagtctctctccgatgcccaggctggagcgcagtagcgcaatctcagctcactgcaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103400789 58 - 106955855 Agagtctctctccgatgcccaggctggagcacagtggcgcaatctcagctcactgcaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709129 58 + 64156825 Agagtctcgctccgatgcccaggctggagtacagtgatgcaatctcagctcactgcaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866598 58 + 59248254 Agagtctcgctccgatgcccaggctggagtacagtgacgcaatctcagctcactgcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956044 58 + 51301725 agagtctcgctctgatgcccaggctggagtacagtgacgcaatctcagctcactgcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656416 58 + 50890351 Agagtctcgctccgatgcccaggctagagtgcagtggtgcaatctcggctcactgcaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 65790 58 + 138250 agagtctcgctgtgttgcccaggctggagggcagcagcacaatctcagctcactgcaa i calJac3.chr22_GL285922_random I 195 C 0 s canFam3.chr1 20142764 7 - 122678785 ---------------------------------------------------ACTGTAA i canFam3.chr1 C 0 C 0 a score=692333.000000 s hg38.chr19_GL949747v2_alt 711000 229 + 729520 cctctgcctcctgggttcaagcgattctcctgcctcagcctcatgagtagctgggattacaggcgctcgccgccacacctggctgatttttgtatttttagtagagacggggtttcaccatgttggccaggctggttttgaactccaggcttcaggtgatccacctgcctcagcctcccaaagtgctgggattacaaagcgtgagccactgcgcccagcTACCTGTCAT s panTro4.chr19 59979605 229 + 63644993 cctctgcctcctgggttcaagcgattctcctgcctcagcctcatgagtagctgggattacaggcgctcgccgccacacctggctgatttttgtatttttagtagagacggggtttcaccatgttggccaggctggttttgaactccaggcttcaggtgatccacctgcctcagcctcccaaagtgctgggattacaaagcgtgagccactgcgcccagcTACCTGTCAT i panTro4.chr19 C 0 M 1933 s ponAbe2.chr19 56931798 229 + 60714840 cctctgcctcctgggttcaagtgattctcctgcctcagcctcatgagtagctgggattacaggcgctcgccaccacacctggctaatttttgtatttttagtagagacagggttttgccatgttggccaggctggtttcgaactccatacctcaggtgatccacctgcctcagcctcccaaagtgctgggattacaaagcgtgagccactgcgcccagctACCTGTCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103400847 229 - 106955855 cctctgcctccggggttcaagcgattctcctgcctcagcctcatgagtagctgggattacaggcgctcgccaccacacctggctaatttttgtatttttagtagagacggggttttgccatgttggccaggccagtttcgaactccagacctcaggtgatccacctgcctcagcctcccaaagtgctgggattacaaagtgtgagccaccgcgcccagcTACCTGTCAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709187 229 + 64156825 cctctgcctcctgggttcaagcgattctcctgcctcagcctcatgagtagctgggattacaggtgctcgccaccacgcctggctaatttttgtatttttagtagagatggggttttgccgtgttggccaggctgggttcgaactccggacctcaggtgatccacctgcctcagcctcccaaagtgctgggattgcaaagtgtgagccaccgcgcccggcTACCTGTCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866656 229 + 59248254 cctctgcctcctgggttcaagcgattctcctgcctcagcctcatgagtagctgggattacaggtgctcgccaacacgcctggctaatttttgtatttttagtagagacggggttttgccgtgttggccaggctggtttcgaactccggacctcaggtgatccacctgcctcagcctcccaaagtgctgggattgcaaagtgtgagccaccgcgcccggcTACCTGTCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956102 229 + 51301725 cctctgcctcttgggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgctcgtcaacacgcctggctaatttttgtatttttagtagagatgcggttttgccgtgttggccaggctggtttcgaactccggacctcaggtgatccacctgcctcagcctcccaaagtgctgggattgcaaagtgtgagccaccgcgcccggctacctGTCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656474 229 + 50890351 cctctgcctcctgggttcaagcgattctcctgtctcagcctcatgagtagctgggattacaggtgctagccaacacgcctggctaatttttgtatttttagtagagacggggttttgccgtgttggccaggctggtttcgaactctggacctcaggtgatccacctgcctcagcctcccaaagtgctgggattgcaaagtgtgagccaccgcgcccggcTACCTGTCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 65848 226 + 138250 actccacctcccgggttcaagcaattctcctaccttggcctc-tgagtag-tgggattacaggagcacagcaccacacctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactcctgacgtcaggtgatccacccacctcagccttccaaagtgctgggattac-aggcgtgagccactgtggccagccCCCTGTCAT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20142771 0 - 122678785 C a score=5348.000000 s hg38.chr19_GL949747v2_alt 711229 2 + 729520 TG s ponAbe2.chr19 56932027 2 + 60714840 TG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401076 2 - 106955855 TG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709416 2 + 64156825 TG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866885 2 + 59248254 TG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956331 2 + 51301725 TG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656703 2 + 50890351 TG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66074 2 + 138250 TG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20142771 0 - 122678785 C e panTro4.chr19 59979834 1933 + 63644993 M a score=932919.000000 s hg38.chr19_GL949747v2_alt 711231 340 + 729520 AATTTGGAAGGATGGCATGAAGTCATTCATAACAAGGACTTAATCCATAGTAAGTGCCAGAACATTGCTGGCTGTTAATATGGTTATTATAAAGAGAACAATGCATGCATATTCC-TCCTCTGAGGA---TCTCCTACCTGATTCCCAGACACACCCAAGGGAGTTAGAACATCTGTTTGGACTCCAGGTGGGCTGTCCACGCCTTTACCATTTTCCTGGTTGTTAACATGTTCCTGATCAGCACTGGGTGCTGTCCCAGGTGCTGAGAGGATTCTCCCACAATGCCCTTTGCTTTCCCCATCAGAGGGTTTATGGCACCCAATTCTCATTCACAT----tctgtctc s ponAbe2.chr19 56932029 342 + 60714840 AATTTAGAAGGATGGCATGAAGTCATTCAAAACAAGGACTTAATCCATAGTAAGTGCCAGAACATTGCTGGCTGTTAATATGGTGATTATAAAGAGAACAATGCATGCAAATTCC-TCCTCTGAGGA---TCTCCTACCTGATTCCCAGACACACCCAAGGGAGTTAGAACATCTATTTGGACTCCAGGTGGGCTGTCCACCCCTTTACCATTTTCCTGGTTGTTAACAAGTTCCTGATCAGCATTGGGTGCTGTCCCAGGTGCTGAGAGGAGTCTCCCACAATGCCCTTTGCTTTCCCCATCAGAGGGTTTACGGCACCCAATTCTCATTCACAT--tctctctctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401078 344 - 106955855 AATTTGGAAGGATGGCATGAAGTCATTCATAACAAGGACTTAATCCATAGTAAGTGCCAGAACATTGCTGGCTGTTAATATGGTTATTATAAAGAGAACAATGCATGCAAATTCC-TCCTCTGAGGA---CCTCCTACCTGATTCCCAGACACACCCAAGGGAGTTAGAACATCTATTTGGACTCCGGGTGGGCTGTCCACCCCTTTACCATTTTCCTGGTTGTTATCAAGGTCCTTATCAGCATTGGGTGCTGTCCCAGGTGCTGAGAGGATTCTCCCACAATGCCCTTTGCTTTCCCTATCAGAGGCTTTATGGCACCCAATTCTCATTCACATtctctctctctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709418 339 + 64156825 AATTTGGAAGGATGACGTGAAGTCATTCATAACAAGGACTTAATCCATAGTAAGTGCCAGAACATTGCTGGCCGTTAGTATGGTTATTATAAAGAGAACAACGCATGCAAATTCC-TCCTCTGAAGA---CCTCCTACCTGATTCCCAGACACACCCAAGAGAGTTAGAACATCTATTTGGACTCCAGGTGGGCTGTGCACCCCTTTACCATTTTCCTGGTTGTT---AAGTTCCTGGTCAGCATCGGGTGCTGTCCCAGGTGCTGAGAGGATTCTCCCACAATGCCCTTTGCTTTCCCCATCAGAGGGTTTATGGCACCCAATTCTCATTCTCAT--tctctctctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866887 335 + 59248254 AATTTGGAAGGATGACGTGAAGTCATTCATAACAAGGACTTAATCCATAGTAAGTGCCAGAACATTGCTGGCCGTTAGTATGGTTATTATAAAGAGAACAACGCATGCAAATTCC-TCCTCTGAAGA---CCTCCTACCTGATTCCCAGACACACCCAAGAGAGTTAGAACATCTATTTGGACTCCAGGTGGGCTGTGCACCCCTTTACCATTTTCCTGGTTGTT---AAGTTCCTGGTCAGCATCGGGTGCTGTCCCAGGTGCTGAGAGGATTCTCCCACAATGCCCTTTGCTTTCCCCATCAGAGGGTTTATGGCACCCAATtctcattctcat------tctctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956333 339 + 51301725 AATTTGGAAGGATGACATGAAGTCGTTCATAACAAGGACTTAATCCATAGTAAGTGCCAGAACATTGCTGGCCGTTAGTATGGTTATTATAAAGAGAACAACGCATGCAAATTCC-TCCTCTGAAGA---CCTCCTACCTGATTCCCAGACACACCCAAGAGAGTTAGAACATCTATTTGGACTCCAGGTGGGCTGTGCACCCCTTTACCATTTTCCTGGTTGTT---AAGTTCCTGGTCAGCATCGGGTGCTGTCCCAGGTGCTGAGAGGATTCTCCCACAATGCCCTTTGCTTTCCCCATCAGAGGGTTTATGGCACCCaattctcattctcat--tctctctctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656705 339 + 50890351 AATTTGGAAGGATGACATGAAGTCATTCATAACAAGGACTTACTCCATAGTAAGTACCAGAACATTGCTGGCTGTTAGTATGGTTATTATAAAGAGAACAACACATGCAAATTCC-TCCTCTGAGGA---CCTCCTACCTGATTCCCAGACACACCCAAGAGAGTTAGAACATCTATTTGGACTCCAGGTGGGCTGTGCACCCCTTTACCATTTTCCTGGTTGTT---AAGTTCCTGGTCAGCATTGGGTGCTGTCCCAGGTGCTGAGAGGATTCTCCCACAATGCCCTTTGCTTTCCCCATCAGAGGGTTTATGGCACCCAATtctcattctcat--tctctctctc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66076 340 + 138250 AATTTGGAAGGATGACATGAAGTCATCCATAACAAGGACTTAATCCATAGTAAGTGCCAGATCATTGCTGGCTGTTAACACTGTTATCACAAAGAGAACAATTTGTGCAAATTTG-TCCTCTGAGGACCTCCTCCTACCTGACTCCCAGACACACCCAAGGGAGTTAAAACATCTATTTGGATTCCCCGTGGGCTGTCCACCCCTTCACCATTTTTCTCGTTAAC---AAATTCCTGATCAGCATTAGGTGCTGTCCCGGGTCCTGAAAGGATTCTCCCACAATGCCCTTTGCTTTCCGCATCAGAGGGTTTATGGCACCCAGTTCTCATTCTCAT----TCTCTCTG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20142771 328 - 122678785 AGTCTGGAAGGTTGACATACAGTCATTCACAAGAAGGACCTAA--CACAGTAAGTACCAGAACATTGCTGGCTGCTAAAGTAGTTATTATACAGGAAATAATGTATGCAAATTCCTTTCTCTGAGGA---CCTCCCACCTGGTTCCCAGACACACCCAAGGTGTTAAGAAACTCTCTTTGGACTCCAGGTAGGCTATGCTCCTCTTTATCACTGTTGATGTTCCT---GAATTCTTGATAACCATCGGGTGCTGTCCCAGGTGCTGAGAGACTTCTCCCGCAAAGCCCTCTGCTTTCCCTATCAG-GGGCTTACAGCCCAAAAT---------CAT--TCTCTGTCTC i canFam3.chr1 C 0 I 1683 e panTro4.chr19 59979834 1933 + 63644993 M a score=39291.000000 s hg38.chr19_GL949747v2_alt 711571 25 + 729520 tcctttctcgttcttctctatctct s ponAbe2.chr19 56932371 25 + 60714840 tcctttctcgttcttctctatctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401422 24 - 106955855 tcctttctcgttc-tctctctctcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709757 25 + 64156825 tcctttcttgttcttctctaactct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55867222 25 + 59248254 tcctttcttgttcttctctaactct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956672 25 + 51301725 tcctttcttgttcttctctaactct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657044 25 + 50890351 tcctttcttgttcttttctgactct i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66416 25 + 138250 TATTTGATCACCACCTCCTACCCCT i calJac3.chr22_GL285922_random C 0 I 78 e canFam3.chr1 20143099 1683 - 122678785 I e panTro4.chr19 59979834 1933 + 63644993 M a score=11034.000000 s hg38.chr19_GL949747v2_alt 711596 15 + 729520 cctctctct-gtctcc----- s ponAbe2.chr19 56932396 15 + 60714840 cctctctct-ctctcc----- i ponAbe2.chr19 C 0 I 244 s nomLeu3.chr10 103401446 15 - 106955855 tctctttcc-ctctct----- i nomLeu3.chr10 C 0 I 10 s rheMac3.chr19 60709782 20 + 64156825 cctctctct-ccccccctcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55867247 20 + 59248254 cctctctct-ccccccctcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956697 21 + 51301725 cctctctctcccccccctcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657069 9 + 50890351 cctctctct------------ i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66441 78 + 138250 I e panTro4.chr19 59979834 1933 + 63644993 M a score=6840.000000 s hg38.chr19_GL949747v2_alt 711611 5 + 729520 ttttc s ponAbe2.chr19 56932655 5 + 60714840 ttttc i ponAbe2.chr19 I 244 C 0 s nomLeu3.chr10 103401471 5 - 106955855 ttttc i nomLeu3.chr10 I 10 C 0 s rheMac3.chr19 60709802 5 + 64156825 ttttc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55867267 5 + 59248254 ttttc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956718 5 + 51301725 ttttc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657078 1 + 50890351 ----c i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66441 78 + 138250 I e panTro4.chr19 59979834 1933 + 63644993 M a score=33636.000000 s hg38.chr19_GL949747v2_alt 711616 35 + 729520 tcttcctctctccctc-tctgtcttctctccctctc s ponAbe2.chr19 56932660 31 + 60714840 tcttcctctctccct-----gtcttctctccctctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401476 33 - 106955855 tcttcctctctccct---ctgtcttctctccctctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709807 36 + 64156825 tcttcctctctctctcctctgttttctctctctctc i rheMac3.chr19 C 0 I 120 s macFas5.chr19 55867272 35 + 59248254 tcttcctctctctctcctctgttttctctctctct- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956723 24 + 51301725 tcttcttctctctctcctctgttt------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657079 16 + 50890351 tctccctctctctctc-------------------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66519 32 + 138250 tctctctctctccctc----tctttctattcctctc i calJac3.chr22_GL285922_random I 78 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e panTro4.chr19 59979834 1933 + 63644993 M a score=57571.000000 s hg38.chr19_GL949747v2_alt 711651 172 + 729520 tc-tccctctctcttcctctct--------------ctcttcctct---------gtcctct----tttctc-------tctctctctccctctctctcaca----tctctctttc--ccttcctttctctttc------ctctct------cttcctctctccctctccctccttct----gtcttcctctatccctctct--tcctct-------tttttcttcctctct--tcttgt s ponAbe2.chr19 56932691 211 + 60714840 tc-tccctctctcttcctctctttct--------ctctcttcctct-------ctgtcctctct--tttctc---cctgtctctctctccctctctctctcacatctctctctttc--ccttcctttctctttc------ctctctttctgtcttcctctctccctctccctccttctctctgtcttcctctctccctctctcttcctctctctccttttttcttcctctctcttctcgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401509 216 - 106955855 tc-tccctctctctgcctctctctctgtcttctcttttctccctctctcatctctttcccttct--tttctctttcctctctttctcttcctctctccctt-----tccctccttctgtcttcctctctccctc-----tccctccttctgtcttcctctctccctctccctccttct----gtcttcctctctccctctctcttcctct-----ctcttttcttcctctct--tcttgt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55867307 134 + 59248254 ---------------cctctgt---------------tttctctct-------gtctcctctct--tttctc-----------------cctctctctcacacacacacgtctttc--ccttcctttctctttctctttcctctctctcttcctctctctctccctctccctccttctctctgtcttcctct------------------------------------------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956747 143 + 51301725 ---tatctctctc-tcctctgt---------------tttctctct-------gtctcctctct--tttctc-----------------c--ctctctcacacacacacgtctttc--ccttcctttctctttctctttcctctctctcttcctctctctctccctctccctccttctctctgtcttcctct------------------------------------------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657095 115 + 50890351 tctcctttttctcttcctctct---------------ctctcctct-------gtcttctctctcctttctc-----------------cctctctctcacacacacacgtgtttc--ccttcctttctctttc--------------ctctctttctctcttcctctcc---------------------------------------------------------------------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66551 116 + 138250 -----------tctccgtctct--------------cttttcctct-------cacttctctctc-cctctc-----------------accctctatctca----------tctc--tctccccatctcaccc----------ctctccgccttcctctttctctctcctttcttcc---tctcttcttg------------------------------------------------- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e rheMac3.chr19 60709843 120 + 64156825 I e panTro4.chr19 59979834 1933 + 63644993 M a score=6292.000000 s hg38.chr19_GL949747v2_alt 711823 12 + 729520 ctctttctctcc s ponAbe2.chr19 56932902 12 + 60714840 ctctttctctcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401725 12 - 106955855 ctctttctctcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709963 8 + 64156825 ----ctctttcc i rheMac3.chr19 I 120 C 0 s calJac3.chr22_GL285922_random 66667 7 + 138250 -----tctctcc i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e chlSab2.chr6 47657210 0 + 50890351 C e papAnu2.chr19 47956890 0 + 51301725 C e macFas5.chr19 55867441 0 + 59248254 C e panTro4.chr19 59979834 1933 + 63644993 M a score=95779.000000 s hg38.chr19_GL949747v2_alt 711835 107 + 729520 tctctctctccctctttctctttctctctctcttcctctc--ccttcctcttcctctctctccttctttct---tcctctctctcttcttgtgtgtg---------------tctctctctctc--------tgt s ponAbe2.chr19 56932914 115 + 60714840 tctctctctccctctctctccttctctctctcttcctctctccctccctcttcctctctctccttctttct---tcctctctctcttcttgtctctc---------------tctctctctctc--ctctcttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401737 99 - 106955855 tctctccctctctc-----------ctctctcttcctctc--cctccctcttcctctctct-----gttct---tcctctctctcttcttgtctctc---------------tctctctctcctctctctcttct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709971 121 + 64156825 tctctctctccctctccctccttctctctgtcttcctctctccttctctcttcctctctctccttttttct---tcctctctctcttcttgtctctctcccctctctcttcttctctctctctt----------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55867441 90 + 59248254 -----------------ctccttctctcttcct--ctctctccttttttcttcctctctctcttcttgtctctctcccctctctcttcttctctctc---------------tctctctctctt----------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956890 82 + 51301725 -----------------ctccttctctcttcct--ctctctccttttttcttcctctctctcttcttgtctctctcccctctctcttct-----------------------tctccctctctt----------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657210 101 + 50890351 -----ctctccctctccctccttctctctgtcttcctctctccttctctcttcctctctc---ttttttct---tcctctctctcttcttgtctctctcc------------cctctctcttct----------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66674 0 + 138250 C e panTro4.chr19 59979834 1933 + 63644993 M a score=146470.000000 s hg38.chr19_GL949747v2_alt 711942 62 + 729520 tctctctctccctctccccccaactctctttccctACACACATCTTAAGAGGCCTCAGCAGT s ponAbe2.chr19 56933029 62 + 60714840 tctctctctccctctccccccaactctctctccctACACACATCTTAAGAGGGCTCAGCAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401836 62 - 106955855 tctctctctccctctccccccaactctctctccctACACACATCTTGAGAGGCCTCAGCAGT i nomLeu3.chr10 C 0 M 2007 s rheMac3.chr19 60710092 62 + 64156825 tctctctctccctctcCCCCCAGCTCTCTCTACCTACATACATCTTCAGAAGCCTCAGCAGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55867531 62 + 59248254 tctctctctccctctccccccagctctctctACCTACATACATCTTCAGAAGCCTCAGCAGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956972 62 + 51301725 tccctctctccctctccccccagctctctctACCTACATACATCTTGAGAAGCCTCAGCAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657311 62 + 50890351 tctctctctccctctccccccaactctctctccctACATACATCTTGAGAAGCCTCAGCAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66674 62 + 138250 tctctctctccctctcCCCCCAACTCTCTCTCCCTACACCCATCTTGAGAGCCCTTAGCAGT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e panTro4.chr19 59979834 1933 + 63644993 M a score=473290.000000 s hg38.chr19_GL949747v2_alt 712004 300 + 729520 GTAAGGTAAGTTTAGCGACCCTGTGGCTGTGTAGAGATAAGCAAAGGGGGGCaaggagctccagtggtcccagactccagccatttgagtctttgcagcccaagcactgccccagcttcttgacagccccagccatcaccaaagggcacacagataagctgcctccaccaaggcctgtgcagatggtaggtttttgagtaaaatagatatgatccttgtctgaagccactgagttttagaataatttgttatatggccatagtaactggaaTGATTGCTGTAGGTTTATTTTA--TTTTATT s ponAbe2.chr19 56933091 299 + 60714840 GTAAGGTAAGTTTAGCGACCCTGAGGCTGTGTAGAGATAAGCAAAGGGGGGCaaggagctccagttgtcc-agactccagccgtttgagtctttccagcccaagcaccgccccagcttcttgacagccccagccatcaccaaagggcacacagataagctgcctccaccaaggcctgtgcagatagtaggtttttgagtaaaatagatatgatccttgtctgaagccactgagttttagaataatttgttacatggccatagtaactggaaTTATTGCTCTAGGTTTATTTTG--TTTTATT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60710154 294 + 64156825 GTAAGGTAAGTTTAGCTACCCTGAAGCTGTGCAGAGATAAGCACA-GGGGCCAACGAGctccagttgtcccagactccagccgtttgaatatttccagcccaagcacctccccagcttcttgccagccccagccatcaccaaagggcacacagataagctgcctccaccagggcctgtgcagatggtaagtttttgagcaaaataaatacggtccttgtctgaagccactgagttttagaataatttgttatatggctgtagtaactggaaTGATTGCTCTAGG-----TTTA--TTTTATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55867593 294 + 59248254 GTAAGGTAAGTTTAGCTACCCTGAAGCTGTGCGGAGATAAGCACA-CGAGCCAACGAGCTCCAGTTGTCCCAGACTCCAGCCGTTTGAATCTTTCCAGCCCAAGCACCTccccagcttcttgccagccccagccatcaccaaagggcacacagataagctgcctccaccagggcctgtgcagatggtaagtttttgagcaaaataaatacggtccttgtctgaagccactgagctttagaataatttgttatatggctgtagtaactggaaTGATTGCTCTAGG-----TTTA--TTTTATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47957034 298 + 51301725 GTAAGGTAAGCTTAGCTGCCCTGAAGCTGTGCAGAGACAATCACA-GGGGCCAACGAGCTCCACTTGTCCCAGACTCCAGCCGTTTGAGTCTTTCCAGCCCAAGCACCTCCCCAGCTTCTTGCCGACCCCAGCCATCACCAAAGGGCACACAGATAAGCTGCCTCCACCAGGGCCTGTGCAGATGGTAGGTTTTTGAGCAAAATAGATATGGTCCTTGTCTGAAGCCACTGAGTTTTAGAATAATTTGTTATATGGCTGCAGTAACTGGAATGATTGCtctaggttta-ttta--ttttatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657373 298 + 50890351 GTAAGGTAAGTTTAGCTACCCTGAAGCTGTGCAGAGATAAGCACA-GGGGCCAATGAGCTCCAGTTGTCCCAGACTCCAGCCGTTTGAGTCTTTCCAGCCCAAGCACCTccccagtttcttgccaaccccagccatcgccaaagggcacacagataagctgcctccaccagggcctgtgcagatggtaggtttttgagcaaaataaatatggtccttgtctgaagccactgagttttagaataatttgttatatggctgcagtaactggaaTGATTGCTCTAGGTTTA-TTTA--TTTTATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66736 284 + 138250 GTAAGATGAGTTTAGCTACCCCAAAGCTCTGTCGAGATAAGAACG-GGGGCCAAGGAGCTCCAGCTGTCCCAGACTCT----------GTCTTTCCAGCTCAGGCACCTCTCCAGCTTCTT-----CCAGAGCCATCACCAAAGGGCGCGCagataagcgacctccaccaagccctgtgcatacagtagattattgagcaaaataaatatggtccttgtctgaagccactgggttttagaataatttgttacatgcctgtagtaactACAATGATTTCTCCGGGttt--tttaacttttatt i calJac3.chr22_GL285922_random C 0 T 342 e canFam3.chr1 20143099 1683 - 122678785 I e nomLeu3.chr10 103401898 2007 - 106955855 M e panTro4.chr19 59979834 1933 + 63644993 M a score=966428.000000 s hg38.chr19_GL949747v2_alt 712304 773 + 729520 CATCCTTGCTGCATGCAACACAT-GCATGGCTCAGTAACTAGAaggaaagaagagaagaagggagggagaggcagagggtggacaggagaggatggtaggaaggaaaga---caggaaaggagGGTGTTGGTGGCCTTGCCTGCAAGCTGAGCAGACACCACGCAAACAGGTGACCTCCCAGTTAAGATGGAGGGGACTCAGGGCTCAGGAGGGGCAGAAGGTCCCCGTGTCGGAGAGCTGGGCAAGC-TTTCTGCAGGAAATGATGGGGATCACGGCCATGTGAGCCGGCAAGATTTCCCTCAGCCAgggaggagactccgggctgtgggaacagcttaagcagaaggcatgggacaggaatgcatatgagagatattgtgggaggagggaggg-ctgcctgggctggcatgcagggtatgggagggggtggaagggctgaggcgggagcc--atcagtaaaaggacccagagcgcggctccaatgccatggtaggaagcttggcgttgactcagagggcgctgggtaccgctgaagagtgttgagccaaggagggtcatgtcacgggcagatacatgttttagaatttct-tcttttctggctgagatgtagagtatggactggagagaagcacaggggacataggaaaggtagttCTAGAAAGAGGGGCTGTCCCACCAGGGAAAGTCAACCAACTGTTCCCCAGTATCCATTCCTCCCTTCCAGCTCATGGCACTAAAGCCACTGATTGATTAGCTGGGTGCTATCAatctctctctc s ponAbe2.chr19 56933390 770 + 60714840 CATCCTTGCTGCGTGCAACACAT-GCATGGCTCAATAACTAgaaggaaagaagagaagaagcgaggaaggggcagagggtggataggagaggatggtaggaaggaaagaagacaggaaaggaggGTGTTAGTGGCCTTGCCTGCAAGCTGAGCAGACACCACGCAAACAGGTGACCTCCCAGTTAAGATGGAGGGGACTCAGGGCTCAGGAGGGGCAGAAGGTCCCTGTGTCGGAGGGCTGGGCAAGC-TTTCTGCAGGAAGTGATGGGGATCACGGCCATGTGAGCCGGCAAGATTTCCCTCAGCCAgggaggagactccaggctgtgggaacagcttaagcagaaggcatgggacaggaatgcag--cggagatattgtgggaggagggaggggctgcctgggctggcatgcagggtatgggagggggtggaagggatgaggcaggagcc--atcagtaaaaggacccagagcgcggctccaatgccatcgtaagaagcttggcgttgactcagagggcgctgggtactgctgaagagtgttgagccacggagggtca-----cgggcaggtacatgttttagaatttct-tcttttctagctgagatgtagagtatggactggagagaagcaccggggacataggaaaggtagttCTAGAAAGAGGGACTGTCCCACTAGGGAAAGTCAACCAACTGTTCCCCAGTATCCATTCCTGCCTTCTAGCTCATGGTACTAAAGCCAGTGATTGATTAGCTGGGTGCCATCAAtctctctctc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60710448 769 + 64156825 CATCCTCGCTGCATGCAGCACGTGGCATGGCTCAGTAACTAgaaggaaagaaaagaagaagggagggaggggcagagggtggacaggagaggatgggaggaaggaaacaagacaggaaaggagCGTGTTGGTGGCCTTGCCTGCAAACTGAGCAGACACCACGCAAACAGGTGACCTCCCAGTTAAGACGGAGGGGACTCAGGGCTCAGGAGGGGCAGAAGGCCCCTGTGttggagagctgggcaagcttttctgtaggaaatgatggggatcacggccatgtgagccggcaggatttcctccagccaggagggagactccaggctgtgggaacagcttaagcagaaggcaggggacaggaatgcag--gagagctattgtgggaggggggaggggctgcctgggctggcatgcagggtatgggagggggtggaagggatgaggcaggagcc--atcagt-aaaggacccagagcgtggctccaatgccatggtaggaagcttggcgtagactcagagggtgctgggtaccactgaagggtgttgagccacggagggtcg-----tgggcagatacgtgctttagaattgctgttttttctggctgagatgtagagtatggactggagaggagcacaggggacataggaagggcagttctagaaggAGCAACTGTCCCACTAAGGAAAGTCAAGTAAC--TTCCTCGGTATCCATTCTTCCCTTCCGGCTCACGGCACTAGAGCCACTGATTGA-CAGCTGGGTGCTATCAATCTCTCTCTC i rheMac3.chr19 C 0 I 13 s macFas5.chr19 55867887 769 + 59248254 CATCCTCGCTGCATGCAGCACGTGGCATGGCTCAGTAACTAGaaggaaagaaaagaagaagggagggaggggcagagggtggacaggagaggatgggaggaaggaaacaagacaggaaaggaGCGTGTTGGTGGCCTTGCCTGCAAACTGAGCAGACACCACGCAAGCAGGTGACCTCCCAGTTAAGACGGAGGGGACTCAGGGCTCAGGAGGGGCAGAAGGCCCCTGTGttggagagctgggcaagcttttctgtaggaaatgatggggatcacggccatgtgagccggcaggatttcctccagccaggagggagactccaggctgtgggaacagcttaagcagaaggcaggggacaggaatgcag--gagagctattgtgggaggggggaggggctgcctgggctggcatgcagggtatgggagggggtggaagggatgaggcaggagcc--atcagt-aaaggacccagagcgtggctccaatgccatggtaggaagcttggcgtagactcagagggtgctgggtaccactgaagagtgttgagccacggagggtcg-----tgggcagatacgtgctttagaattgctgttttttctggctgagatgtagagtatggactggagaggagcacaggggacataggaagggcagttctagaaggAGGAACTGTCCCACTAAGGAAAGTCAAGTAAC--TTCCTCGATATCCATTCTTCCCTTCCGGCTCACGGCACTAGAGCCACTGATTGA-CAGCTGGGTGCTATCAAtctctctctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47957332 768 + 51301725 catcctcGCTGCATGCAGCACGTGGCATGGCTCAGTAactagaaggaaagaagagaagaagggagggaggggcagagggtggacaggagaggatgggaggaaggaaacaagacaggaaaggagCGTGTTGGTGGCCTTGCCTGCAAACTGAGCAGACACCACGCAAACAGGTGACCTCCCAGTTAAGATGGAGGGGACTCAGGGCTCAGGAGGGGCAGAAGGCCCCTGTGTTGGAGAACTGGGCAAGC-TTTCTGTGAGAAATGATGGGGATCAC--CCCTGTGAGCCGGTAGGATTTCCTCCAGCCAGGAGGGAGACTCCAGGCTGTGGGAACAGCTTAAGCAGAAGGCAGGAGACAGGAATGCAG--GAGAGCTAttgtgggagaggggaggggctgcctgggctggcatgcagggtatgggagggggtggaagggatgaggcAGGAGCCAGATGAGT-AAAGGACCCAGAGCGTGGCTCCAATGCCATGGTAGGAAGCTTGGCGTAGACTCAGAGGGTGCTGGGTACCACTGAAGAGTGTTAAGCCACAGAGGGTCG-----TGGGCAGATACGTGCTTTAGAATTGCTGTTTTTTCTGGCTGAGATGTAGAGTATGGACTGGAGAGGAGCACAGGGGACATAGGAAGGGCAGTTCTAGAAGGAGGAACTGTCTCACTAAGGAAAGTCAAGTAAC--TTCCCCAGTATCCATTCCTCCCTTCCGGCTCACGGCACTAGAGCCACTGATTGA-CAGCTGGGTGctatcaatctctctctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657671 761 + 50890351 CATCCTCGCCGCATGCAGCACGTGGCATGGCTCAATAACTAGaaggaaagaagagaagaagggagggaggggcagagggtggacaggagaggatgggaggaaggaaagaagacaggaaaggaGCGTGTTGGTGGCCTTGCCTGCAAACTGAGCAGACACCACGCAAACAGGTGACCTCCCAGTTAAGACGGAGGGGACTCAGGGCTCAGGAGGGGCAGAAGGCCCCTGTGTTGGAGAGCTGGGCAAGC-TTTCTGTAGGAAATGATGGGGATCACGGCCATGTGAGCTGGCAGGATTTCCTCCAGCCAGGAGGGAGACAccaggctgtgggaacagctgaagcagaaggc--ggggcagggatgcag--gagagctattgtgggaggggggaggggctgcctgggctggcatgcagggtatgggagggggtggaagggatgaggcaggagcc--atcagt-aaaggacccagagcgtggctccaatgccatggtaggaagcttggcatagactcagagggtgctgggtaccactgaagagtgttgagccacggagggtca-----tgggcagatacatgctttagaattgctgttttttctggttgagatgtagagtatggactggagaggagcacaggggacatagga-----agttctagaaggaggaactgtctcactaaGGAAAGTCAAGTAAC--TTCCCCAGTATCCATTCTTCCCTTCCAGCTCATGGCACTAGAGCCACTGATTGA-CAGCTGGGTGCTATCAAtctctctctc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 67020 342 + 138250 T e nomLeu3.chr10 103401898 2007 - 106955855 M e panTro4.chr19 59979834 1933 + 63644993 M a score=27466.000000 s hg38.chr19_GL949747v2_alt 713077 63 + 729520 atctctct-----ctccctctttctctccccctcatctgtgtcttttctctctctcatctctctgtct s ponAbe2.chr19 56934160 51 + 60714840 atctctct-----ctccctctttctccccccctcctctgtgtcttttctctctctc------------ i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55868656 58 + 59248254 -tctctccccccacccccgctttctctccccttcctctgtgtctcctctctctctc-tct-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47958100 61 + 51301725 -tctctctc----ccccctctttctctccccctcctctgtgtctcctctctctttc-tctctcatct- i papAnu2.chr19 C 0 I 6 s chlSab2.chr6 47658432 51 + 50890351 -tctcccccccc-ccaactctttctctccccctcctctgtgtctcctctctct--------------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 67020 342 + 138250 T e nomLeu3.chr10 103401898 2007 - 106955855 M e rheMac3.chr19 60711217 13 + 64156825 I e panTro4.chr19 59979834 1933 + 63644993 M a score=141233.000000 s hg38.chr19_GL949747v2_alt 713140 233 + 729520 ccctctttctgtccccctcctccgtg----tctcctctctctctcttctctgtctcatatctctctcattgctctctccctctttctctccc-cctcctgtgtctccttctctctctctctttctcccccatctctctttctctcccccttcctctctttctcctctcactcttcctgtttctctcttt--ctctttcttcctctctttctccctgtctctctcttcctcttttcctttg s ponAbe2.chr19 56934211 157 + 60714840 ------------------------------tctcatctctctctct-------------------------------ccctctttctgtccc-cctcctgtgtctccttctctctct---------------------ttctctcccccttcctctctttctcctctcactcttcctgtttctctctcttcctctttcttcctctcttcctccctctctctctcttcctcttttcctttg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60711230 228 + 64156825 CCCGCTTTCTCTCCCCTTCCTCTGTGtctcctctctctctctctctcatcgctctc---tctctctcatctctctctccctctttctctcccccaccccgtgtctccttctctctctctctctct---ccatctctctttctctcccccttactctctttctcctctcagtcttcc----tctctgttt--ctctctctcttcctctttctccctctctctctctTCCTCTTTTCCTTTG i rheMac3.chr19 I 13 C 0 s macFas5.chr19 55868714 195 + 59248254 ------------------------------ctctctctctctctctcatcgctctc---tctctctcatctctctctccctctttctctccc---ccccgtgtctccttctctctctctctctct---ccatctctctttctctcccccttactctctttctcctctcagtcttcc----tctctgttt--ctctctctcttcctctttctccctctctctctcttcctcttttcctttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47958167 138 + 51301725 ------------------------------ccctctttctctccc------------------------cgctctgtgtctccttctctctc----------------tctctatctctctcttt---ctctcccccttactctctc-----------------------tcttcc----tctctgttc--ctctctctcttcctctttctccctctctctctcttcctcttttcctttg i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 47658483 187 + 50890351 ------------------------------------ctctctctctcatcactctc---tctctctcatctctctctccctctttctctccc---ccccatgtctccttctc--tctctctctct---ccatctctctttctctcccccttactctctttctcctctcagtcttcc----tctctgttt--ctctctctcttcctctttctccctctctctctcttcctcttttcctttg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 67020 342 + 138250 T e nomLeu3.chr10 103401898 2007 - 106955855 M e panTro4.chr19 59979834 1933 + 63644993 M a score=143213.000000 s hg38.chr19_GL949747v2_alt 713373 81 + 729520 tctctctctctccccccaactctctctccctACACACATCTTGAGAGACCTCAGCAGTGTAAGATAAGTTTAGCTACTCCA s ponAbe2.chr19 56934368 81 + 60714840 tctctccctctcCCCTCAACTCTCTCTCCCTACACACATCTTAAGAGACCTCAGCAGTGTAAGATAAGTTTAGCTACTCCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60711458 81 + 64156825 TCTCTCCCTCTCCCCCCAACTTTCTCTTCCTACACACATCTTGAGAGACCTCCGCAGTGTAAGATAAGTTTAACTCCCCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55868909 81 + 59248254 tctctccctctcCCCCCAACTTTCTCTTCCTACACACATCTTGAGAGACCTCAGCAGTGTAAGATAAGTTTAACTCCCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47958305 81 + 51301725 tctctccctctccccccaactttctctccctACACACATCTTGAGAGGCCTCAGCAGCGTAAGGTAAGTTTAACTCCccca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47658670 81 + 50890351 tctctccctctcCCCCCAACTTTCTCTTCCTACACACGTCTTGAGAGGCCTCAGCAGTGTAAGATAAGTTTAACTCCCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66678 81 + 138250 tctctccctctcCCCCCAACTCTCTCTCCCTACACCCATCTTGAGAGCCCTTAGCAGTGTAAGATGAGTTTAGCTACCCCA i calJac3.chr22_GL285922_random T 342 I 1902 e canFam3.chr1 20143099 1683 - 122678785 I e nomLeu3.chr10 103401898 2007 - 106955855 M e panTro4.chr19 59979834 1933 + 63644993 M a score=647320.000000 s hg38.chr19_GL949747v2_alt 713454 536 + 729520 Cggcctggcacggtagctcacgcctttaatcccagcactttgagaggccaaggcaggcagatcactggagattaggggtttgaaaccagcctggccaacatggtgaaaccctgtctctactacaagtaccaaaaaattagctgggcatggtggcacgcgcctgtagtcccagctactcggaaggctgaggcaggagaatcgcttgagcctgggaggcggaagttgcagtgagccgagacca-cacctctgcactccagcctgggtgacagagtgagattctgtctcaaaaaaa---gaaagaGGAggccgggcactgtggctcaggcctgtaatcccagcactttgggaggccgaggcatgcagatcacgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccgtctctatt-aaaaatacaaaaaaattagccaggcacggtggcgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgaga s ponAbe2.chr19 56934449 538 + 60714840 Cggcccggcacggtggctcacgcctttaatcccagcactttgagaggccaaggcaggcagatcactggagatcaggggtttgaaaccagcctggccaacatggtgaaaccctgtctctactacaagtaccaaaaaattagctgggcatggtggcacgcacctgtagtcccagctactcggaaggctgaggcaggagaatcgcttgagcctaggagacagaggttgcagcgagccaagacca-cacctctgcactccagcctgggtgacacagtgagattctgtctcaaaaaaaaaagaaagaGGAggccgggcactgtggctcaggcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccatctctact-aaaaatacaaaaaa-ttagccgggcatggtggcaggtgcctgtagttccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagcggaga i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60711539 526 + 64156825 Tggctgggcatggtggtgcacgcctgtaatcctaacactttgggaggccgaggcaggaggatcacttgagatcaggagtttgaaaccagcctggccaaca---tgaaaccctgtctctactacaattaccaaaaaattagct-ggcatagtggctcacacctgtagtcccagctactcggaaggctgaggcagaagaatcgcttgaacccgggagtcagaggttgcagtgagcagagatcg-catctctgcactccagcctgggcgacagagcgagattctgtctcagaaaaa---GTCAGAGGAGGCTg------gtggctcacacctgtaatcccaggactttgggaggctgaggcaggtggatcatgaggtcaggagatcgagaccatcctggctaacatggtgaaaccctgtctctactaaaaaatacaaaaaa-ttagccaggtgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaaccagggaggcggagcttgcagtgatctgaga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55868990 526 + 59248254 Tggctgggcatggtggtgcacgcctgtaatcctaacactttgggaggccgaggcaggaggatcacttgagatcaggagtttgaaaccagcctggccaaca---tgaaaccctgtctctactacaattaccaaaaaattagct-ggcatagtggctcacacctgtagtactagctactcggaaggctgaggcaggagaatcgcttgaacccgggagtcagaggttgcagtgagcagagatcg-catctctgcactccagcctgggcgacagagcgagattctgtctcagaaaaa---GTCAGAGGAGGCTg------gtggctcacacctgtaatcccaggactttgggaggctgaggcaggtggatcatgaggtcaggagatcgagaccatcctggctaacatggtgaaaccctgtctctactaaaaaatacaaaaaa-ttagccaggtgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaaccagggaggcggagcttgcagtgatctgaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47958386 528 + 51301725 tggctgggcatggtggggcacgcctgtaatcctaacactttgggaggccgaggcaggcggatcacttgagatcaggagtttgaaaccagcctagccaaca---tgaaaccctgtctctactacaagtaccaaaaaattagccgggcatagtggctcacacctgtagtcccagctactcggaaggctgaggcaggagaatcgcttgaacccgggagtcagaggttgcagtgagcagagatcgccacctctgcactccagcctgggcgacagagcgagattctgtctcagaaaaa---gtcAGAGGaggctg------gtggctcacacctgtaatcccaggactttgggaggccgaggcaggtggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccctgtctctattaaaaaatacaaaaaa-ttagccaggtgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggtgtgaacccgggaggcagagcttgccgtgagtCAAGa i papAnu2.chr19 C 0 I 72 s chlSab2.chr6 47658751 525 + 50890351 Tggctgggcatggtggtgcacgcctgtaatcctgacactttgggaggccgaggcaggcggatcacttgagatcaggagtttgaaaccagcctagccaaca---tgaaaccctgtctctactacaagtaccaaaaaattagcg-ggcatagtggctcacacctgtagtcccagctactcggaaggctgaggcaggagaatcgcttgaacccgggagtcagaggttgcagtgagcagagattg-cacctctgcactccagcctgggcgacagagcgagattctgtctcagaaaaa---GTAAGAGGAGGCTg------gtggctcacacctgtaatcccaggactttgggaggccgagacaggtggatcacgaggtcaggagatcgagaccatcctggctaacacagtgaaaccctgtctctact-aaaaatacaaaaaa-ttagccaggcgtggtggtgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgatctgaga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66759 1902 + 138250 I e nomLeu3.chr10 103401898 2007 - 106955855 M e panTro4.chr19 59979834 1933 + 63644993 M a score=28076.000000 s hg38.chr19_GL949747v2_alt 713990 33 + 729520 tcgcgccactgcactccagcctgggcgacagag s ponAbe2.chr19 56934987 33 + 60714840 tcacaccactgcactccagcctgggcgacagag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60712065 33 + 64156825 tggtgccactgcactccagcctgggcaacagag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55869516 33 + 59248254 tggtgccactgcactccagcctgggcaacagag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47659276 33 + 50890351 tggtgccactgcactccagcctgggcaacagag i chlSab2.chr6 C 0 I 383 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66759 1902 + 138250 I e nomLeu3.chr10 103401898 2007 - 106955855 M e papAnu2.chr19 47958914 72 + 51301725 I e panTro4.chr19 59979834 1933 + 63644993 M a score=3987.000000 s hg38.chr19_GL949747v2_alt 714023 12 + 729520 caagactctgtc s ponAbe2.chr19 56935020 12 + 60714840 caagactctgtc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60712098 12 + 64156825 agaaatcctgtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55869549 12 + 59248254 agaaatcctgtc i macFas5.chr19 C 0 I 638 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66759 1902 + 138250 I e nomLeu3.chr10 103401898 2007 - 106955855 M e chlSab2.chr6 47659309 383 + 50890351 I e papAnu2.chr19 47958914 72 + 51301725 I e panTro4.chr19 59979834 1933 + 63644993 M a score=6111.000000 s hg38.chr19_GL949747v2_alt 714035 39 + 729520 aagaaagaaa-gaaaagaaaagaaaaaaagaaaAGAATAA- s ponAbe2.chr19 56935032 39 + 60714840 aagaaagaaaagaaaagaaaaaaagaaaagaaaagaa-aa- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103403960 38 - 106955855 aagggaggga-gagaggaagggaagtaaggaagggag-gg- i nomLeu3.chr10 M 2007 C 0 s rheMac3.chr19 60712110 15 + 64156825 -----------------------tgaaaaaaaaagaa-a-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55870199 39 + 59248254 aaggaaggaa-ggaaggaaagaaagaaaaagaaagaa-aga i macFas5.chr19 I 638 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66759 1902 + 138250 I e chlSab2.chr6 47659309 383 + 50890351 I e papAnu2.chr19 47958914 72 + 51301725 I e panTro4.chr19 59979834 1933 + 63644993 M a score=9924.000000 s hg38.chr19_GL949747v2_alt 714074 28 + 729520 agggagggagggaagg--gaaaggaaggga s ponAbe2.chr19 56935071 21 + 60714840 agggagggagggaggg---------aggga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103403998 30 - 106955855 agggaggaagggaaggaaggaagggaggga i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55870238 20 + 59248254 agggtgggagggaggg---------aggg- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47958986 21 + 51301725 agggagggaggaaggg--------aaggg- i papAnu2.chr19 I 72 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66759 1902 + 138250 I e chlSab2.chr6 47659309 383 + 50890351 I e rheMac3.chr19 60712125 0 + 64156825 C e panTro4.chr19 59979834 1933 + 63644993 M a score=50696.000000 s hg38.chr19_GL949747v2_alt 714102 74 + 729520 aggaaggaaggaagg-aaggaaggaaggaaggaaggaaggaaggaaggggaggggaggggaggggaag------ggaggga s ponAbe2.chr19 56935092 45 + 60714840 aggaa--aaggaagggaaggaaggaaggaagaaagaaagaaagaaag---------------------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103404028 80 - 106955855 gggaggaagggaagt-aaggaagggagggagagaggaagggaggaagggagggagggaggaagggagggaggaaggaagga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60712125 32 + 64156825 ----------------------------------------aaggaaggaaggaaggaaggaaggaagg---------agga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55870258 71 + 59248254 aggaaggaaggaagg-aaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagg---------agga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47959007 74 + 51301725 agggagggagggagg-aaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagcaaggaagg------agaagga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47659692 68 + 50890351 ----agggagggagg-gaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagg--------aagga i chlSab2.chr6 I 383 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66759 1902 + 138250 I e panTro4.chr19 59979834 1933 + 63644993 M a score=78437.000000 s hg38.chr19_GL949747v2_alt 714176 38 + 729520 agAAAGGCA--------------------GGCCCTGATGTTCAGGGAGCTGAGAGTGA s ponAbe2.chr19 56935137 38 + 60714840 aaaAAGGCA--------------------GGCCCTGATGTTCAGGGAGCTGAGAGTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103404108 58 - 106955855 aggaaggcaggcaggcaggcaggcaggCCGGCCCTGATGTTCAGGGAGCTGAGAGTGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60712157 38 + 64156825 aAGAAAGAA--------------------GACCCTGATGTTCAGGGAGCTGAGAGTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55870329 38 + 59248254 aagaaagaa--------------------gACCCTGATGTTCAGGGAGCTGAGAGTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47959081 38 + 51301725 aacaaagaa--------------------gacCCTGATGTTCAGGGAGCTGAGAGTGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47659760 38 + 50890351 aagaaagaa--------------------gACCCTGATGTTCAGGGAGCTGAGAGTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 68661 38 + 138250 AAAGAGGAA--------------------GACCCTGGGGTTCAGGGAGCGGAGAGTGA i calJac3.chr22_GL285922_random I 1902 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e panTro4.chr19 59979834 1933 + 63644993 M a score=340370.000000 s hg38.chr19_GL949747v2_alt 714214 161 + 729520 AGTCACCGGCTCCAACCCAGGATCCAAACTCAAGTCTGTCTGGGGTCCTATC-CCCGTCACCAC--CCCC--------CGCCCCGACCCA-------------------------TCCCCCAGAGACCTGGGAAGGAGCCAGGCTCCTCCGGTTTCAGGAAAGGGCTGCACAAACCACCCCGCCACGATCCCTCCCA s ponAbe2.chr19 56935175 161 + 60714840 AGTCACCAGCTCCAACCCAGGATCCAAATTCAAGTCTGTCTGGGGTCCTATC-CCCGTCACCAC--CCCC--------CACCCCAACCCA-------------------------TCCCCCAGAGACCTGGGAAGGAGCCAGGCTCCTCCGGTTTCAGGAAAGGGCTGCACAAACCGCCCCGCCACGATCCCTCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103404166 163 - 106955855 AGTCACCGGCTCCAACCCAGGATCCAAACTCAAGTCTGTCTGGGGTCCTATC-CCCGTCACCACCACCCC--------CGCCCCGACCCA-------------------------TCCCTCAGAGACCTGGGAAGGAGCCAGGCTCCTCCGGTTTCAGGAAAGGGCTGCACAAACCGCCCCGCCACGATCCCTCCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60712195 151 + 64156825 AATCACTGGCTCCAACCCAGGATCCAAACTCAAGTCTGTCTGGGGTCCTGTC-CCCGTCACCA---CCCG--------CTCCCCGACCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAC----------------------------------GGGGCGGCACAAACCGCCCCTCCACGATCCCTCCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55870367 160 + 59248254 AATCACTGGCTCCAACCCAGGATCCAAACTCAAGTCTGTCTGGGGTCCTGTC-CCCGTCACCA---CCCG--------CTCCCCGACCCA-------------------------TCCACCACAGACCTGGGAAGGAGCCAGGCTCCTCCGGTTTCAGGAAAGGGCGGCACAAACCGCCCCTCCACGATCCCTCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47959119 160 + 51301725 AATCACTGGCTCCAACCCAGGATCCAAACTCAAGTCTGTCTGGGGTCCTGTC-CCCATCACCA---CCCG--------CTCCCCGACCCA-------------------------TCCACCACAGACCTGGGAAGGAGCCAGGCTCCTCCGGTTTCAGGAAAGGGCGGCACAAACCGCCCCTCCACGATCCCTCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47659798 160 + 50890351 AATCACTGGCTCCAACCCAGGATCCAAACTCAAGTCTGTCTGGGGTCCTATC-CCCGTCACCA---CCTC--------CTCCCCGACCCA-------------------------TCCACCACAGACCTGGGAAGGAGCCAGGCTCCTCCGGTTTCAGGAAAGGGCGGCACAAACCGCCCCTCCATGATCCCTCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 68699 157 + 138250 CGTCACTGGCTCCAACCCAGGATGCAAAGTCAAGTCTGTCTGGGGTCCTGGC-CCCATCACCA---CTC-----------CCTTGACCCA-------------------------GCCCCCACAGACCTGGGAAGGAGCCAGGCTCCTCCAGTTTCAGGACGGGGCTGCCCAAACCGCCCTGCCAGGATCCCTCCCA i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20144782 156 - 122678785 agtcacctgGTCTGACCCAAGACCTAAACTCCAGTC--TCTGAGTCCCTTCCACTCGCTGCCC---CCCCCCTCCGGGCCCCCAGGCCCA-------------------------GCCCCCTCCCACCAGCCCTAGGGCCAGTCTCCCCCAGTTTCAGGAAATTG--------ACCCACCCTCC---ATCTCTCCCA i canFam3.chr1 I 1683 C 0 e panTro4.chr19 59979834 1933 + 63644993 M a score=2716755.000000 s hg38.chr19_GL949747v2_alt 714375 882 + 729520 GAGAACAAACAG-------------CTCCCGGCCACCGGCAGTCT--C---------------CCTCCTCCTCCTG---CCAGGCTGGTTCCCAGACCCACCCTCCCTGTGTCATAAGCGCCTCTCCCCGCACTCTCACCAGGGCTGGCTGTTC---TCAGAGGAACGCCCAGGAAAAACCTACCCGAACCCCTTTCAGCTGGGAAGGGGACCCGCCTGGGCTTCCT---CACCGCCGATGAGACCTCCCTCGTCGTACACTTAGAGCTGCC-TGTGTTTTCCTTCCTTCCTTAAGCGGGCTGGGAACTCTAGACACTCAGGGATGGG-----CCAGCCCATTAGAGTAAGCATTCGGCCACC-TCTAGGCTGCTACGGTCACTGCTGCTGTCACCATCAACGT-------GACTGtctcacacctcacttcctccggccagccacacccctgcagatttaacccgccagcctccctaagg--tttcctctgcctgaaatcctctctgcattcctggctcattctcgaaattgaggtcaaagctcagatgccgcctcctt-----------ccctgaccaccctacctgaagcagccgcacctgcctgctcctagtcacgccgttccttcacc----tgtttcgtttcctccacagggtttaccacaatctgaaagtcttattcatgcaggtgtctacttgtttatct------ccccaccacacctactaggatgacaatatcacaagggctggggtttcatctgtctcctcct-cctctgtatctccagcacatgaaacatgcttggcacactgtaggtgcttaagtatttgctactacatcactttgggattttgcataggacactcccaatgcttagaatgtcaatctttgcttcattgtccttggcaaactcctattcatcctttgaaaccccatccatttatcccttaaccag s panTro4.chr19 59981806 881 + 63644993 GAGAACAAA-AG-------------CTCCCGGCCGCCGGCTTTCT--C---------------CCTCCTCCTCCTG---CCAGGCCGGTTCCCAGACCCACCCTCCCTGTGCCATAAGCGCCTCTCCCCGCACCCTCACCAGGGCTGGGTGTTC---TCAGAGGAACGCCCAGGAAAAACCTACCCGAACCCCTTTCAGGTGGGAAGGGGACCCGCCTGGGCTTCCT---CACTGCCGATGAGACCTCTCTCGTCGTACACTTAGAGCTGCC-TGTGTTTTCCTTCCTTCCTTAAGCGGGCTGGGAACTCTAGACACTCAGGGATGGG-----CCAGCCCATTAGAGTAAGCATTCGGCCACC-TCTCGGCTGCTACGGTCACTGCTGCTGTCACCATCAACGT-------GACTGtctcacacctcacttcctccggccagccacacccctgcagatttaacccgccagcctccctaagg--tttcctctgcctgaaatcctctccgcattcctggctcattctcgaaattgaggtcaaatctcagatgctgcctcctt-----------ccctgaccaccctccctgaagcagccgcacctgcctgctcctagtgactctgttccttcacc----tgtttcgtttcctccacagggtttaccacaatctgaaagtcttattcatgcaggtgtctacttgtttatct------ccccaccacacctactaagatgacaatatcacaagggctggggtttcatctgtctcctcct-cctctgtatctccagcacataaaacatgcttggcacactgtaggtgcttaagtatttgctactacatcactttgggattttgcataggacactcccaatgcttagaatgtcaatctttgcttcattgtccttggcaaactcctattcatcctttgaaaccccatccatttatcccttaaccag i panTro4.chr19 M 1933 C 0 s ponAbe2.chr19 56935336 879 + 60714840 GAGAACAAACAG-------------CTCCTGGCCGCC-GCAGTCT--C---------------CCTCCTCCTCCTG---CCAGGCCGGTTCCCAGACCCACCCTCCCTGTGCCATAAGCGCCTCTCCCCGCACCCTCACCAGGGCTGGCTGTTC---TCAGAGGAACGCCCAGGAAAAACCTACCCGAACTCCTTTCAGCTGGGAAGGGGACCCGCCTGGGCTTCCT---CACTGCCGATGAGACCTCTCTCATCGCACACTTAGAGCTGCC---TGTTTTCCTTCCTTCCTTAAGCGAGCTGGGAACTCTAGACACTCAGGCTTGGG-----CCAGCCCATTAGAGTAAGTATTCGGCCACC-TCTTGACCGCTAAGGTCACTGCTGCTGTCACCATCAACAT-------GACTGTCTCACACCTCACTTCCTCCGGCCAGCCACACCCCTGCAGAATTCACCCGCCAGCCTCCCTGAGg--tttcccctgcctgaaatcctctccacattcctggctcattctcgaaattgaggtcaaagctcagatgccacctcctt-----------ccctgaccaccctatctgaagcagccgcacctgcctgctcctagtcactcagttccttcacc----tgtttcgtttcctccacagcatttaccacaatctgaaagtcttattcatgcaggtgtctacttgtttatct------ccccatcacacccactaggatgacaatatcacaagggctggggtttcatctgtctcctcct-cctctgtatctccagcacatgaaacatgcttggcacactgtaggtgcttaagtatttgctactacatcactttgggattttgcataggacactcccaatgcttagaatgtcaatctttgcttcattatccttggcaaactcctattcatcctttgaaaccccatccatttatcccttaaccag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103404329 882 - 106955855 GAGAACAAACAG-------------CTCCTGGCCGCCAGCAGTCT--C---------------CCTCCTCCTCCTG---CCAGGCCGGTTCCCAGACCCACCCTCCCTTCGCCATAAGCGCCTCTCCCCGCACCCTCACCAGGGCTGACTGTTC---TCAGAGGAATGCCCAGGAAAAACCTACCCGAACCCCTTTCAGCTGGGAAGGGGACCCACCTGGGCTTCCT---CACTGCCGATGAGACCTCCCCCATCGCACACTTAGAGCTGCC-TGTGTTTTCCTTCCTTCCTTAAGCGGGCTGGGAACTCCAGACACTCAGGCTTCGG-----CCAGCCCATTACAGTAAGCATTCGGCCACC-TCTCGGCTGCTACGGTCACTGCTGCTGTCACCATCAACGT-------GACTGTCTCACACCTCACTTCCTCCGGCCAGCCACACCCCTGCAGATTTAACCCGCTAGCCTCCCTAAGg--tttcctctgcctgaaatcctctccgcgttcctggctcattctcgaaattgaggtcaaagctcagacgccgcctcctt-----------ccctgaccaccctacctgaagcagccgcacctgcctgctcctagtcactccgttccttcacc----tgtttcgtttcctccacagcgtttaccacaatctgaaagtcttattcatgcaggtgtctacttgtttatct------ccccaccacacccactaggatgacaatctcacaagggctggggtttcatctttctcctccc-cctctgtatctccagcacatgaaacatgcttggcacactgtaggtgcttaagtatttgctactacatcactttgggattttgcataggacagtcccaatgcttagaatgtcaatctttgcttcattgtccttggcaaactcctattcatcctttgaaaccccatccatttatcccttaaccag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60712346 844 + 64156825 GAGAGCAAACAG-------------CTCCCGGCCGCCGCAGGTCT--C---------------CCTCCTCTTCCTG---CCAGGCCGGTTCCCAGACCCACCCTCCCTGTGCCATAAGCGCCTCTCCCCGCACCCTCACCAGGGCTGGCTGGTC---TCAGAGGAACGCCCAGGAAAAATCTACCTGAACCCCTTTCCGCTGGGAAGGGGACCCGCCTGGGCTTCCT---CACTGCCGATGAGACCTCCCTCATCGCACGCTTAGAGCTGCC-TGCATTTTCCTTCCTTCCTCAAGCGGGCTGGGAAGTCTAGAGACTCAGGCTTGGG-----CCAGCCCATTAGCGTAAGCA-TCAGCCACCGTCTCAGCTGCTACGGTCA---CTGCTGTCACCATCAACGT-------GACCATCTCACACCTCACGTCCTCCGgccagccacactcctgcacatttaagccgccagcctccctaagg--tttcctctgcctgaaatcctctccgcattcctggctcattctcgaaattgaggtcaaa--------accgcctcctt-----------ccctgaccaccctatctgaagcag-----------------------------cccttcacctc--tgtttcgtttcctctacagcgtttactacaatctgaaagtcttattcacgtaggtgtctacttgtttatct------ccccaccacacccactaggatgacaatatcacaagggctggggtttcatctgtctcctcct-cctctgtgtctccagcacataaaacatgcttggcacactgtaggtgcttaagtatttgctactacgtcactttgggattttgcataggacactcccagtgcttagaatctcaattgttgcttcattgtccttggcaaactcctattcatcctttaaaaccccatccatttatcccttaaccaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55870527 870 + 59248254 GAGAGCAAACAG-------------CTCCCGGCCGCCGCAGGTCT--C---------------CCTCCTCTTCCTG---CCAGGCCGGTTCCCAGACCCACCCTCCCTGTGCCATAAGCGCCTCTCCCCGCACCCTCACCAGGGCTGGCTGGTC---TCAGAGGAACGCCCAGGAAAAATCTACCCGAACCCCTTTCCGCTGGGAAGGGGACCCGCCTGGGCTTCCT---CACTGCCGATGAGACCTCCCTCATCGCACGCTTAGAGCTGCC-TGCATTTTCCTTCCTTCCTCAAGCGGGCTGGGAAGTCTAGAGACTCAGGCTTGGG-----CCAGCCCATTAGCGTAAGCA-TCAGCCACCGTCTCAGCTGCTACGGTCA---CTGCTGTCACCATCAACGT-------GACCGTCTCACACCTCACGTCCTCCGGCCAGCCACACCCCTGCACATTTAAGCCGCCAGCCTCCCTAAGg--tttcctctgcctgaaatcctctccgcattcctggctcattctcgaaattgaggtcaaa--------accgcctcctt-----------ccctgaccaccctatctgaagcagccgcacctgcctactcgtagtcactccgtcccttcacctc--tgtttcgtttcctctacagcgtttactacaatctgaaagtcttattcacgtaggtgtctacttgtttatct------ccccaccacacccactaggatgacaatatcacaagggctggggtttcatctgt---ctcct-cctctgtatctccagcacataaaacatgcttggcacactgtaggtgcttaagtatttgctACTACGTCActttgggattttgcataggacactcccagtgcttagaatctcaattgttgcttcattgtccttggcaaactcctattcatcctttaaaaccccatccatttatcccttaaccaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47959279 875 + 51301725 GAGAGCAAACAG-------------CTCCCGGCCGCCGCCagtct--c---------------cctcctcttcctg---ccaGGCCGGTTCCCAGACCCACCCTCCCTGTGCCATAAGCGCCTCTCCCCGCACCCTCACCAGGGCTGGCTGGTC---TCAGAGGAACGCCCAGGAAAAACCTACCCGAACCCCTTTCCGCTGGGAAGGGGACCCGCCTGGGCTTCCT---CACTGCCAATGAGACCTCCCTCATCGCACGCTTAGAGCTGCc-tatgttttccttccttcctcaagcGGGCTGGGAAGTCTAGGGACTCAGGCTTGGG-----CCAGCCCATTAGCTTAAGCATTCAGCCACCGTCTCAGCTGCTACGGTCA---CTGCTGTCACCATCAACGT-------GACCGTCTCACACCTCACGTCCTCCGGCCAGCCACGCCCCTGCACATTTAAGCCGCCAGCCTCCCTAAgg--tttcctctgcctgaaatcCTCTCTGCATTCCTGGCTCATTCTCGAAATTGAGGTCAAA--------ACCGcctcctt-----------ccctgaccaccctatcTGAAGCAGCCGCACCTGCCTACTCGTAGTCACTCCGTCCCTTCACCTC--TGTTTCGTTTCCTCTACAGCGTTTACTACAATCTGAAAGTCTTATTCACATAGGTGTCTACTTGTTTATCT------CCCCAccacacccactaggatgacaATATCACAAGGGCTGGGGTTTCATCTGTCTCCTCCTACCTCTGTATCTCCAGCACATAAAACATGCTTGGCACACTGTAGGTGCTTAAGTATTTGCTACTACGTCACTTTGGGATTTTGCATAGGACACTCCCAGTGCTTAGAATGTCAATTGTTGCTTCATTGTCCTTggcaaactcctattcatcctttaaaACCCCATCCATTTATCCCTTAACCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47659958 859 + 50890351 GAGAGCAAACAG-------------CT-CCGGCCGCCGCAAGTCT--C---------------CCTCCTCTTCCTG---CCAGGCCGGTTCCCGGACCCACCCTCCCTGTACCACAAGTGCCTCTCCCTGCACCCTCACCAGGGCTGGCTGGTC---TCAGAGGAACACCCAGGAAAAACCTACCCGAACCCCTTTCCGCTGGGAAGGGGACCCGCCTGGGCTTCCT---CACAGTTGATGAGACGTCCCTCATCGCACACTTAGAGCTGCC-TGTGTTTTCCTTCCTTTCCT---------------TCTAGAGACTCAGGCTTGGG-----CCAGCCCATTAGCGTAAGCA-TCAGCCACCATCTCAGCTGCTACGGTCA---CTGCTGTCACCATCAACGT-------GACCGTCTCACACCTCACGTCCTCCGGCCAGCCACACCCCTGCACATTTAACCCGCCAGCCTCCCTAAGG--TTTCCTCTGCCTGAAATCCTCTCCGCATTCCTGGCTCATTCTCGAAATTGAGGTCAAA--------ACCGCCTcctt-----------ccctgaccaccctatctgaagcagccgcacctgcctactcgtagtcactctgtcccttcacctctgtgtttcgtttcctctacagcgtttaccacaatctgaaagtcttattcacgtaggtgtctacttgtttatct------ccccaccacacccactaggatgacaatatcacaggggctggggtttcatctgtctcctcct-cctctgtatctccagcacataaaacatgcttggcacactgtaggtgcttaagtatttgctactatgtcactttgggattttgcataggacactcccaatgcttagaatgtcaattgttgcttcattgtccttggcaaactcctattcatcctttgaaaccccatccatttatcccttaaccag i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 68856 844 + 138250 GAGAACAAACAG-------------CTCCCGCCCGGCGACAGCCT--CCCTCCTCCACCGCCTCCTCCTCCTCCTG---CCAGGCCGGTTCCCAGACCCACCCTC---------------CCTCTCCCCGCACCCTCGCCAGGGCTGGCTGGTC---TCAGAGGAACGCCTAGGAAAAACCCACCCAAACCCCTTTCAGTTAGGAAGGGGACACACCTGGGCTTCCTGAACGCTGCCGATGAGACCTCTCTCATCGCA--GTTAGAGCTGCC---------------------AGACAATCTGGGAACCCTAGAAACTGAGGCTTGGG-----CCAGCCCATTAGAGTCAGCACTCAGCCACCCTTCCGGCTGCTGCCGCCA---GTGCTGTCACCATCAGCGT-------GACTGTCACACACCTCACTTCCTGCGGCCAGCCGCACCCCTGCAGATTTAACCCGCCAGCCTCCCCAAGg--tctccttcgcctgaaatcctctccgcattcctggc---ttctcaaaattcaggtcaaagctcagatgccacctcctc-----------ccctgaccaccctccctgaagtggctgcacctgcctgctcctagtcactccatcccttcacctc--tgttctgtttcctccacagcgtttaccacagtctgaaagtcttattcatgtaggtgtctacct-tttatct-------cccaccacacccagtaggatgacagtatcacaaaggctggggtttcatctgtctcctcct-cctct--------------taaaacatgcttggcgtgtggtaggtgcttaagtatttgctACTACGTCActttgggattttgaatagaacactcccaatgcttagaatgtcaatctttgcttcactgtccttggcaaactcctattcatcctatgaaaccccatcaatttatcccttaatcag i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20144938 829 - 122678785 GAGAACAAACAGCCTCGCTCTCAACCTCCCTACCCACCCCCTTCTGCC---------------CCTCCCCCGCCAGGCACCTGGCGGGTTCTCAGACCCACCCTCCTTGGGTCACA-------------GTGCCTGCTCTGGGGCAGGCAGGCCCATCCCCAGATCTGCACGGAAACACCTCACCCA---CCCTTCC------------------TCTGGGCTTCCC---CACAGCC---------------------CATTCAGGGCAGCCTTGAGTTTGTGACACCTCCCCAGCC----------------AGACTCAGGCTCAGGATGACCCCATCCACCCACGCTGGAGTTTGGCCACCCTCTTGTTTGCTATTGCCA---TAGTTGTCACCGTGACAGTCCTGGTAGCCAGTCTCCAGCCTGACATGCTCTGGccagacacaaccctacaggcctcacctgccagcctccccaaggtattccttctgcccagaaccctctctgcattcctgactcattcttgaaattcaggtcaaagctcagatgccacctcctcactgaggccagccctgacta-cctctctgaagtgactatacctgcttgccctcagtagccccatctcttcacctt--ggttttatgtcctccatggc----accac-------aagtcttcctcatggatgtgcttaccagtttaccttctgtctcccaccacacccgccagggcaacaataacacaagggcagggcttttgtctgtccagtgct-c-------------------agaacgtgcttggaacaaagtcgg----cATGTATTTGCTACTATGtgactttgggactttgcaaatgctactatcaatgcttagactgtcatcccttgctgcattgtccttgggaaactcctatttatccttcagaaccctctccagttatcacTCAACTGG i canFam3.chr1 C 0 I 483 a score=544796.000000 s hg38.chr19_GL949747v2_alt 715257 180 + 729520 gaaaggcttctgtgcctcatacaaccacccataaagctggattagggctttctctggggacac-ccttgccctgtgccacacttccattagcgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTACGGCACACATTTTGTCTCAGGAGCTACGTattgaataaataaat s panTro4.chr19 59982687 180 + 63644993 gaaaggcttctgtgcctcatacaaccacccataaagctggattagggctttctctggggacac-ccttgccctgtgccacacttccattagcgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTACGGCACACATTTTGTCTCAGGAGCTACGTATTGAATAAATAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936215 180 + 60714840 gaaaggcttctgtgcctcatacaaccacccataaagctggattagggctttctctggggacac-ccttgccctgtgccacacttccattagtgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTAAGGCACACATTTTGTCTCAGGAACTACGTATTGAATAAATAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405211 180 - 106955855 gaaaggcttctgtgcctcatacaaccaccgataaagctggattagggctttctctggggacac-ccctgccctgtgccacacttccattagcgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTAAGGCACACATTTTGTCTCAGGAAATACGTATTGAATAAATAAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60713190 180 + 64156825 gaaaggcttctgtgtctcatacaaccacccataaagctggattagggctttctctggggacac-acatgccctgtgacacacttccattagtgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTAAAGCACACATTTTGTCTCAGGAACTACGTATTGAATGAATGAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55871397 180 + 59248254 gaaaggcttctgtgtctcatacaaccacccataaagctggattagggctttctctggggacac-acatgccctgtgacacacttccattagtgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTAAAGCACACATTTTGTCTCAGGAACTACGTattgaatgaatgaat i macFas5.chr19 C 0 I 312 s papAnu2.chr19 47960154 180 + 51301725 GAAAGGCTTCTGTGTCTCATACATCCACCCATAAAGCTGGATTAGGGCTTTCTCTGGGGACAC-ACATGCCCTGTGACACACTTCCATTAGTGCACATATCCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTAAAGCACACATTTTGTCTCAGGAACTAcgtattgaatgaattaat i papAnu2.chr19 C 0 I 306 s chlSab2.chr6 47660817 180 + 50890351 gaaaggcttctgtgtctcatacaaccacccataaagctggattagggctttctctggggacat-acatgccctgtgccacacttccattagtgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTAAAGCACACATTTTGTCTCAGGAACTACGTATTGAATGAATGAAT i chlSab2.chr6 C 0 I 306 s calJac3.chr22_GL285922_random 69700 186 + 138250 aaaaggctcctgtgcctcatactatcaaccataaagccagattagggctttctctggggatacaccttgccctgaaccacacttccattagtgtacatat-ctccatgaattatgattgtGCACACCAGCAGGGTCTAGAGTGAGGTACCAATTTTGTGTCAGGAACTATGTATTGAATGAATAAAT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20145767 483 - 122678785 I a score=31004.000000 s hg38.chr19_GL949747v2_alt 715437 14 + 729520 taattacttttttt----------- s panTro4.chr19 59982867 13 + 63644993 TA-TTACttttttt----------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936395 14 + 60714840 TAACTACttttttt----------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405391 14 - 106955855 TAACTACttttttt----------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60713370 14 + 64156825 TAATTACTTTTTTT----------- i rheMac3.chr19 C 0 I 343 s macFas5.chr19 55871889 14 + 59248254 TAATTACttttttt----------- i macFas5.chr19 I 312 C 0 s papAnu2.chr19 47960640 14 + 51301725 taattacttttttt----------- i papAnu2.chr19 I 306 C 0 s chlSab2.chr6 47661303 14 + 50890351 TAATTACttttttt----------- i chlSab2.chr6 I 306 C 0 s calJac3.chr22_GL285922_random 69886 21 + 138250 ----TACtttttttttttttttttt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20145767 483 - 122678785 I a score=88516.000000 s hg38.chr19_GL949747v2_alt 715451 35 + 729520 gagacaaggtcttgctctgtcacccaggctggagt s panTro4.chr19 59982880 35 + 63644993 gagacaaggtcttgctctgtcacccaggctggagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936409 35 + 60714840 gagacaaggtcttgctctgtcaccctggctggagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405405 35 - 106955855 gagacaaggtcttgctctgtcacccaggctggagt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55871903 35 + 59248254 gagacaaggtcttgctctgtcgcccaggctggagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47960654 35 + 51301725 gagacaaggtcttgctctgtcgcccaggctggagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47661317 35 + 50890351 gagacaaggtcttgctctgtcacccaggctggagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 69907 35 + 138250 gaaacaagatcttactctgtcacccaggctggagt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20145767 483 - 122678785 I e rheMac3.chr19 60713384 343 + 64156825 I a score=787462.000000 s hg38.chr19_GL949747v2_alt 715486 262 + 729520 gcagtggtgcaatcgtggctcactgta-ccttgacctcccaggttcaagcaatcctcccacctcagcctcccaagcagctaggaccacagatgcaggccactatgcctggctaatttttaattttttttttggtagggatggaatctccctatgttgcccaggctggtttcaaactcctaggctcaagggatcctcctgcctctgcttcccaaagtactgggactataggtgtgagacgccacactcagcctcattatttaat s panTro4.chr19 59982915 261 + 63644993 gcagtggtgcaatcgtggcttattgta-ccttgacctcccaggttcaagcaatcctcccacctcagcctcccaagcagctaggaccacagatgcaggccactatgcctggctaatttaaaattttttttt-ggtagggatggaatctccctatgttgcccaggctggtttcaaactcctaggctcaagggatcctcctgcctccgcttcccaaagtactgggactataggtgtgagacaccacactcagccTCATTGTTTAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936444 262 + 60714840 gcagtgatgcaatcgtggctcactgtagccttgacctcccaggatcaagcgatcctcccacctcagcctcccaagcagctaggatcacaaatgcatgccactatgcctggctaatttttaaatttttttt-tgtagggatggaatctccctatgttgcccaagctggtttcaaactcctaggctcaagggatcctcctgcctccgcttcccaaagtactgggcctataggtgtaagacaccacattcagccTCATTATTTAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405440 261 - 106955855 gcagtggtgcaatcatagctcactgtagccttgacttcccaggctcaagcaatcctcccacctcagcctcccaagcagctaggaccacaaatgcatgccactatgcctggctaatttttaaatttttttt--gtagggatggaatctccctatgttgcccaggctggtttcaaactcctaggctctagggatcctcctgcctccgcttcccaaagtactgggactataggtgtgagacaccacagtcagccTCATTATTGAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60713727 261 + 64156825 gcagtggtgcaatcatggctcactgtagccttgacttcccaggctcaagcaatcctcccacctcagcctcccaagcagttaggaccacaagtgcatgccactgtgcctggctaatttttaaattattttt--gtagggatggaatcttcctatgttgcccaggctggtttcaaactcctaggctcaagggatcctcctgcctccgcttcccaaagtaccgggactataggtgtgagacatcacactctgccTCATTATTTAAT i rheMac3.chr19 I 343 C 0 s macFas5.chr19 55871938 261 + 59248254 gcagtggtgcaatcatggctcactgtagccttgacttcccaggctcaagcaatcctcccacctcagcctcccaagcagttaggaccacaagtgcatgccactgtgcctggctaatttttaaattattttt--gtagggatggaatcttcctatgttgcccaggctggtttcaaactcctaggctcaagggatcctcctgcctccgcttcccaaagtaccgggactataggtgtgagacatcacactctgcctcattatttaat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47960689 261 + 51301725 gcagtggtgcaatcatggctcactgtagccttgaattcccaggctcaagcaatcctcccacctcagcctcccaagcagttaggaccacaagtgcatgccactacacctggctaattttaaaattattttt--gtagggatggaatcttcctatgttgcccaggctggtttcaaactcctaggctcaagggatcctcctgcctccgcttcccaaagtaccgggactataggtgtgagacaTCACACTCTGCGTCATTATTTAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47661352 261 + 50890351 gcagtggtgcaatcatggctcactgtagccttgacttcccaggctcaagcaatcctcccacctcagcctcccaagcagttaggaccacaagtgcatgccactatgcctggctaatttttaaattattttt--gtagggatggaatcttcctatgttgcccaggctggtttcaaactcctaggctcaagggatcctcctgcctccgcttcccaaagtaccgggactataggtgtgagacatcacactctgccTCATTATTTAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 69942 261 + 138250 gcagtggtgcaatcacagctcactgcagccttgccctcccaggctcaagcaatcctcccacctcagtctcccaagtagctagaaccacaagtgcgtgccactatgcctggctaatttttagatttcttaa--gtagagatggaatctccctatgctgcccaggctggtttcaaactcctaggctcaagtgatcctcctgccttagcttcccaaagtactgggactataggtgtgagccaccacactcagccTAATTATTTCAT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20145767 483 - 122678785 I a score=370754.000000 s hg38.chr19_GL949747v2_alt 715748 108 + 729520 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCC-ATCTAATTTATAACCTCCCTCCTTCTCAAGAACATGCCTCAGCTCCCATTGCCAGGGAATCTGACCTTTCTCC s panTro4.chr19 59983176 109 + 63644993 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTAATTTATAACCTCCCTCCTTCTCAAGAACATGCTTCAGCTCCCATTGCCAGGGAATCTGACCTTTCTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936706 109 + 60714840 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTAATTTATAACCTCCCACCTTCTCAAGAACATGCCTCAGCTCCCATTGCCGGGGAATCTGACCTTTCATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405701 109 - 106955855 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTAATTTATAACCTCCCTCCTTCTCAAGAACATGCCTCAGCTCCCGTTGCCAGGGAACCCGACCTTTCTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60713988 109 + 64156825 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTAATTTACAACCTTCCCCCTTCTCAAGAGCATGCCTCAGCTCCCATTGGCAGAGAATCTGACCTTTCTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55872199 109 + 59248254 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTAATTTATAACCTCCCCCCTTCTCAAGAACATGCCTCAGCTCCCATTGGCAGGGAATCTGACCTTTCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47960950 109 + 51301725 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTAATTTATAACCTCCCCCCTTCTCAAGAACATGCCTCAGCTCCCATTGGCAGGGAATCTGACCTTTCTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47661613 109 + 50890351 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTGATTTATAACCTCCCCCCTTCTCAAGAACATGCCTCAGCTCCCACTGGCAGGGAATCTGACCTTTCTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 70203 109 + 138250 ATGTAAGTAGCTTTATCGCTCTGAGACCCAGTCCCCATCTAATTTATAACCTCCCCGCTTCTCAAGAACGTGCTTTAGCTCCCATTGTCAGGGTATCTGACCTTTCTCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20146250 101 - 122678785 ATGTAAATAAGTATATCTTCCTGAGACCCAGCTCCCACCTTATTTATATCTGCCCCCC--------AAACTGCCATATCTCCTATTTCCTGTGCCTGTGACTGTCCACC i canFam3.chr1 I 483 I 9 a score=391103.000000 s hg38.chr19_GL949747v2_alt 715856 134 + 729520 TTGTC-ATAGGAt------tttttttttttttt----gagtcagaatctcagtcagtcacccagcctggagtgca-tggcgcaat---ggctcgctgcaacctctgcctcccgggttcaagtgattctcctgcctcagtctccctagta s panTro4.chr19 59983285 138 + 63644993 TTGTC-ATAGGAt------ttttttttttttttttttgagtcagaatctcagtcagtcgcccagcctggagtgca-tggcacaat---ggctcgctgcaacctctgcctcccgggttcaagtgattctcctgcctcagtctccctagta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936815 138 + 60714840 TTGTC-ATAGGAt------ttttttttttttttttttgagtcagaatctcagtcagtcacccagcctggagtgca-tggcgcaat---ggctcgctgcaacctctgcctcccgggttcaagcaattctcctgcctcagtctccctagta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405810 138 - 106955855 TTGTC-ACGGGAt------ttttttttttttttttttgagtcagaatctcagtcagtcacccagcctggagtgca-tggcgcaat---ggctcgctgcaacctctgcctcctgggttcaagcaattctcctgcctcagtctccctagta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60714097 138 + 64156825 TTGTC-ATAGGAA------ttttttttttttttttttgagtcagaatctcagtcagtcacccagcctggagtgca-tggcacgat---gactcgctgcaccctctgcctcccaggttcaagcgattctcctgcctcagtctccctagta i rheMac3.chr19 C 0 I 427 s macFas5.chr19 55872308 136 + 59248254 TTGTC-ATAGGAA--------ttttttttttttttttgagtcagaatctcagtcagtcacccagcctggagtgca-tggcacgat---gactcgctgcaccctctgcctcccaggttcaagcgattctcctgcctcagtcgccctagta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47961059 144 + 51301725 TTgtc-ataggaattttttttttttttttttttttttgagtcagaatctcagtcagtcacccagcctggagtgca-tggcacgat---gactcgctgcaacctctgcttcccaggttcaagtgattctcctgcctcagtctccctagta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47661722 133 + 50890351 TTGTC-ATAGGAA-----------tttttttttttttgagtcagaatctcagtcagtcacccagcctggagtgca-tggcacgat---gactcactgcaccctctgcctcccaggttcaagtgattctcctgcctcagtctccctagta i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 70312 141 + 138250 TTGTCGATAGGAA--------ttttttttttttttttgaaacagaatctcactcagtcacccagcctggagtgcagtggcatgatctcggctcactgaaacctctgcctcctggtttcaggcaattctcctgcctcagctttcctagta i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20146351 9 - 122678785 I a score=332129.000000 s hg38.chr19_GL949747v2_alt 715990 146 + 729520 gctgggactacaa--gcgcacgccaccacacccagctacttttgtagagatggggtttcaccatgttggctaagctggtctcgaactcctgatctcaagtgat-----------ggcctcccaaaatgctgggtaacaggtgtgaggcaccacatccgg s panTro4.chr19 59983423 146 + 63644993 gctgggactacaa--gcgcacgccaccacacccagctacttttgtagagatggggtttcaccatgttggctaagctggtctcgaactcctgatctcaagtgat-----------ggcctcccaaaatgctgggtaacaggtgtgaggcaccacacccgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936953 146 + 60714840 gctgggactacaa--gtgcacgccaccactcccgtctacttttgtagagatggggtttcaccatgttggctaagctggtctcgaactcctgatctcaagtgat-----------ggcctcccaaaatgctgggtagcaggtgtgaggcaaaacacccgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405948 146 - 106955855 gctgggactacaa--gtgcacgccaccacacccggctacttttgtagagatggggtttcaccatgttggctaagctggtctcgaactccagatctcaagtgat-----------ggcctcccaaaatgctgggtaacaggcgtgaggcaccacacgcgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55872444 148 + 59248254 gctgggactacaagtgcgcacgccaccacacccggctacttttgtagagatagcatttcaccgtgttggctaagctggtcttgaattcctgatctcaagtgat-----------ggcctcccaaaatgctgggtagcaggtgcgaggcaccgcacccgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47961203 148 + 51301725 gctgggactacaagtgcgcacgccaccacacccggctacttttgtagagatagaatttcaccgtgttggctaagctggtcttgaattcctgatctcaagtgat-----------ggcctcccaaaatgctgggtagCAGGTGCgaggcaccgcacctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47661855 146 + 50890351 gctgggactacaa--gcgcacgccaccacacccggctacttttgcagagatagcgtttcaccgtgttggctaagctggtctcgaattcctgatctcaagtgat-----------ggcctcccaaaatgctgggtagcaggtgcaaggcaccgcacctgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 70453 157 + 138250 gctgggactacag--gcgcacatcaccacacctggatacttttgtagagacagggtttcaccatgttggccaggctggtcttgaactcctgatctcaagtgatccacccacctgaacctcccaaaatgctgggtaacaggcatgagccactgcacccag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20146351 9 - 122678785 I e rheMac3.chr19 60714235 427 + 64156825 I a score=447029.000000 s hg38.chr19_GL949747v2_alt 716136 200 + 729520 cTGTCATAGGAATTTGTCAGCAAATCCTACAGACTAGAGGATGTGTGTTGGGTGGTG----TGGGGGTGGGGATAACGGAGGAGATGGGG------------------------GG---TG----AGCTCTTCAAGCCCCAGGGGAGAATTCTGTTCCGTTCCTGGGACATCCCAGGTGAGAGGGAAGAAAGGCCAG-CCCCCCAAGAC--AGCTATCCCAGACTGGG-ACAGAGGCAA s panTro4.chr19 59983569 200 + 63644993 cTGTCATAGGAATTTGTCAGCAAATCCTACAGACTAGAGGATGTGTGTTGGGTGGTG----TGGGGGTGGGGATAACGGAGGAGATGGGG------------------------GG---TG----AGCTCTTCAAGCCCCAGGGGAGAATTCTGTTCCGTTCCTGGGACATCCCAGGTGAGAGGAAAGAAAGGCCAG-CCCCCCAAGAC--AGCTATCCTAGACTGGG-ACAGAGGCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56937099 202 + 60714840 ctGTCATAGGAATTTGTCAGCAAATTCTACAGACTAGAGGATGTGTGTTGGGTGGTA----TGGGGGTGGGGATAACGGAGGAGATGGGG-----------------------AGG---TG----AGCTCTTCAAGCCCCAGGGGAGAATTCTGTTCCGTTCCTGGGACATCCCAGGTGAGAGGGAAGAAAGGCCAACCCCCCCAAGAC--AGCTATCCCAGACTGGG-ACAGAGGCAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103406094 200 - 106955855 cTGTCATAGGCATTTGTCAGCAAATCCTACAGACTAGAGGGCGTGTGTTGCATGGTG----TGGGGGTGGGGATAACGGAGGAGATGGG-------------------------GG---TG----ACCTCTTCAAGCCCCAGGGGAGAATTCTGTTCCATTCCTGGGACATCCCAGGTGAGAGGGAAGAAAAGCCAG-CCCCCCAAGAC--AGCTATCCCAGACTGGGCATAGAGGCAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55872592 205 + 59248254 cTGTCATAGGAATTTGTCAGCGAGTCCTACAGACTGGAGGTTACGCGTGGGGTGGTG----TAGGGGTGGGGATAACGGAGGAGATGGGGG--------------------AGGGG---TG----AACTCTTCAAGCCCCAGGGGAGAAGTCTGTTCCATTCCTGGGACATCCTAGGTGACAGGGAAGAAAGTCCAG-CCCCCCAAGAC--AGCTATCCCAGACTGGGCATAGAGGCAA i macFas5.chr19 C 0 I 477 s papAnu2.chr19 47961351 205 + 51301725 ctgtcATAGGAATTTGTCAGCAAATCCTACAGACTGGAGGTTACGCGTGGGGTGGTG----TAGGGGTGGGGATAACggaggagatggggg--------------------agggg---tg----aACTCTTCAAGCCCCAGGGGAGAAGTCTGTTCCATTCCTGGGACATCCTAGGTGACAGGGTAGAAAGTCCAG-CCCCCCAAGAC--AGCTATCCCAGACTGGGCATAGAGGCAA i papAnu2.chr19 C 0 I 479 s chlSab2.chr6 47662001 205 + 50890351 cTGTCATAGGAATTTGTCAACAAATCCTACAGACTGGAGGTTACGTGTGGGGTGGTG----TAGGGGTGGGGATAACGGAGGAGATGGGGG--------------------AGGGG---TG----AACTCTTCAAGCCTCAGGGGAGAAGTCTGTTCCATTCCTGGGACATCCTAGGTGACAGGGAAGAAAGTCCAG-CCCCTCAAGAC--AGCTATCCCAGACTGGGCATAGAGGCAA i chlSab2.chr6 C 0 I 478 s calJac3.chr22_GL285922_random 70610 223 + 138250 cTGTCATATGAATTTATTAGCAAATCCTACGGACTGGAGGATATGTGTTGG--GGT-------GGGGTGGGGATAAGAGAAGAGATGGGAATGGTTTCAAACATGACACTCGGGGG---AGTCTCAGCTCTTCAAGCCCCAGTGGGGAATTCTGTTCCATTTCGGGGACCTCCTAGGTGAGAGGAAAGAAAGTCCAG--CCCCCATGAC--AGCTATCCCAGACTGGGCATAAAGGCAA i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20146360 231 - 122678785 CCATCCTAGGAATTCATCAGCAAACCCTACA-ACTGGGGAGT-CGGGCTGAGCTGTGTGTTTGGCAAGGAGGAGAAGGAAAGAGGTGGGG-TGCTTTTAGAGATGATATATGGGGAATCTG----AGCTGATCAGGCTCCAGTGGGGAATTGTGTGTGCTGCTGGGGCTCCTCCAACCCAGAGAATAAACAATCCAA-TCGCCAATGACAAAGCTATCCGAGTTTTGGGACAGAAGCAG i canFam3.chr1 I 9 C 0 e rheMac3.chr19 60714235 427 + 64156825 I a score=1198817.000000 s hg38.chr19_GL949747v2_alt 716336 365 + 729520 ACCCTGA-CCACAGAGCCCTGTCACTCACCCAAGAACAGGTGCCAATGACAGAATAGCCAGGCCGAGGGGGG-AGAGAGGTGCTTCGGTGATGGATTTCCCTGGTGACTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACTGTGCAGGGGTGGACACTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAGGGAGGGGCCTCCTTTGCGGCCAGAGAAGGAGGAAAGAGGCCCTGGGCCCTGGGACTTGGGACTTGGGTGGAGGCTCGGGTTTCGG--------TCTCACCTGCTGCTCCAGACCATGG----CCTGGAGG-GCCGCCTGCGCCACC---CCCAAAGCAATGAGAT s panTro4.chr19 59983769 358 + 63644993 ACCCTGA-CCACAGAGCTCTGTCACTCACCCAAGAACAGGTGCCAATGACAGAATAGCCAGGCCGAGGGGGG-AGAGAGGTGCTTCGGTGATGGATTTCCCTGGTGACTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGACTCAGACTGTGCAGGGGTGGACACTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAGGGAGGGGCCTCCTTTGCGGCCACAGAAGGAGGAAAGAGGCCCTGGGCCCTGGGACTTGGG-------TGGAGGCTCGGGTTTCGG--------TCTCACCTGCTGCTCCAGACCATGG----CCTGGAGG-GCCGCCTGCGCCACC---CCCAAAGCAATGAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56937301 358 + 60714840 ACCCTGA-CCACAGAGCCCTGTCACTCACCCAAGAACAGGTGCCAATGGCAGAACAGCCAGGCTGAGGGGGG-AGAGAGGCGCTTCGGTGATGGATTTCCCTGGTGACTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACTGTGCAAGGGTGGACACTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAGGGAGGGGCCTCCTTTGTGGCCAGAGAAGGAGGAAAGAGGCCCTGGGCCCTGGGACTTGGG-------TGGAGGCTCGGGTTTCGG--------TCTCACCTGCTGCTCCAGACCATGG----TCTGGAGG-GCCGCCTGCGCCACC---CCCAAAGCAATGAGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103406294 355 - 106955855 ACCCTGA-CCACAGAGCCCTGTCATTCACCCAAGAACAGGTACCAATGACAGAATAGCCAGGCAGAGGGGGG-AGAGAGGGGCTTCGGTGATGGATTTCCCTGGTGACTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACTGTGCAGGGGTGGACACTTTGACTGGTATTTGGGAGGTATTTGCTGTGGGTTACAGGGAAGGAGGGGCCTCCTTTGCGGCCAGAGA---AGGAAAGAGGCCCTGGGCCCTGGGACTTGGG-------TGGAGGCTCCGGTTTCGG--------TCTCACCTGCTGCTCCAGACCATGG----CCTGGAAG-GCCGCCTGCGCCACC---CCCAAAGCAATGAGAT i nomLeu3.chr10 C 0 I 357 s rheMac3.chr19 60714662 359 + 64156825 aCCCTGA-CCACAGGGCCCTGTCACTCACCCAAGAACAGCTGCCAATGACAGAATAGCCAGGCCGAGGGGGCAAGAGAGGTGCTTCGCTGATGGATTTCCCTGGTGCGTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACTGTGCAGGGGTGGACACTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAGGGAGGGGCCTGCTTTGCGGCCAGAGAAGGAGGAAAGAGGCCCTGGGCCCTGGGACTAGGG-------TGGAGGCTCGGGTTTCGG--------TCTTACCTGCTGCTCCAGACCATGG----CCTGGAGG-GCTGCCTGCGccacc---cccaaagcaaggagat i rheMac3.chr19 I 427 I 6 s macFas5.chr19 55873274 359 + 59248254 aCCCTGA-CCACAGGGCCCTGTCACTCACCCAAGAACAGCTGCCAATGACAGAATAGCCAGGCCGAGGGGGGAAGAGAGGTGCTTCGCTGATGGATTTCCCTGGTGCGTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACTGTGCAGGGGTGGACTCTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAGGGAGGGGCCTGCTTTGCGGCCAGAGAAGGAAGAAAGAGGCCCTGGGCCCTGGGACTAGGG-------TGGAGGCTCGGGTTTCGG--------TCTTACCTGCTGCTCCAGACCACGG----CCTGGAGG-GCTGCCTGCGCCACC---CCCAAAGAAAGGAGAT i macFas5.chr19 I 477 I 446 s papAnu2.chr19 47962035 359 + 51301725 ACCCTGA-CCACAGGGCCCTGTCACTCACCCAAGAACAGGTGCCAATGACAGAATAGCCAGGCCGAGGGGGGAAGAGAGGTGCTTTGGTGATGGATTTCCCTGGTGAGTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACTGTGCAGGGGTGGACACTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAGGGAGGGGCCTGCTTTGcggccagagaaggaggaaagaggccCTGGGCCCTGGGACTAGGG-------TGGAGGCTCGGGTTTCGG--------TCTTACCTGCTGCTCCAGACCATGG----CCTGGAGG-GCCGCCTGCGCCACC---CCCAAAGCAAGGAGAT i papAnu2.chr19 I 479 I 6 s chlSab2.chr6 47662684 359 + 50890351 aCCCTGA-CCACAGGGCCCTGTCACTCACCCAAGAACAGGTGCCAGTGACAGAATAGCCAGGCCAAGGGGGGAAGAGAGGTGCTTCGGTGATGGATTTCCCTGGTGAGTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACCGTGCAGGGGTGGACACTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAAGGAGGGGCCTGCTTTGCGGCCAGAGAAGGAGGAAAGAGGCCCTGGGCCCTGGGACTAGGG-------TGGAGGCTCGGGTTTCGG--------TCTTACCTGCTGCTCCAGACCATGA----CCTGGAGG-GCCGCCTGCGCCACC---CCCAAAGCAAGGAAAT i chlSab2.chr6 I 478 I 6 s calJac3.chr22_GL285922_random 70833 339 + 138250 ACCCTGA-ACACAGAGCCCTGTCACTCACCCAGGAACAGGAGCT-GTGACAGAATAGCCAGGC----GGGGG----GAAGTTCCTCAGTGATGGGTCTCCCTGGTGAGTTGCCAAGATAGGGCTTCGCTGCCTCCGCCCTGGACCGGCTGAGTCACACCGTGCAGGGGTGGACACTGTGC----TATTTGGGAACCATGTGCTGTGGGTTACAGAGAGGGAGGGGCCTCCTTTGTGGCCAGAGAAGGAGGAAAGA-------GGCCCTGGGACTAGGG-------TGTAGGCTCCGGTTTCGG--------TCTTACCTGCTGCTCCAGACCATGG----CCTGGAGG-GCCGCCTACAccacc---cccaaagcaaggaaat i calJac3.chr22_GL285922_random C 0 I 6 s canFam3.chr1 20146591 366 - 122678785 ACTCAGACCCACAGAGTCCTAAAGCTCACTTAATGAAAGG---CACTGACTATGTTGGCAGACAAGGGGTTG-AAAAGGATTCTCAGGTGGCTGGTTGCCCTGGTGAGTCTCCAAGACCAGGGTTCACTGCCTCCACCCGGGATGTACTGAGTCACGCTGTACAGGGGTGGGAGCCTCCACTGGTATTTGGGAGCCACTTGCTATGGTTTGAAGAAAGGGA-GGGCCTCCTTTGTGGCCAGAGAAGGAGGAAGGAGGCCGTGGG-CCTAGAACTAGGG-------CGGAGGCTCTGGTTTCGATCTCACCTTCTCACCTGCTGCTTCAGACCTCAGAGCACCTGAAGGCAGGGACTAGGGCACCTGTCCCTGGGCCCTG---- i canFam3.chr1 C 0 C 0 a score=178018.000000 s hg38.chr19_GL949747v2_alt 716701 77 + 729520 agcccctcctccctcagacccaggag-tccaggccc-ccagcccctcctccctca-------------------------------------------gacccaagagtccag-------------------------------------------------------------------------------------------a-ccccagcc s panTro4.chr19 59984127 151 + 63644993 agcccctcctccctcagacccaggag-tccaggccc-ccagcccctcctccctca-------------------------------------------gacccaggagtccaggcccccagcccctcctccctcagacc-----------------cagaagtccaggcccccagcccctcctccctcagacccaagagtcgaga-ccccagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56937659 150 + 60714840 agcccctcctccctcagacccagaag-tccaggccc-caagcccctcctccctcagacccagaagtccaggccccagcccctcctccctcagacccaggagtccaggccccaa-------------------------------------------------------------gcccctcctccctcagacccaagagtccaga-caccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103407006 78 - 106955855 agctcctcctccctcagacccaggag-tccaggtcc-ccagctcctcctccctca-------------------------------------------gacccaggagtccag------------------------------------------------------------------------------------------gc-ccccagcc i nomLeu3.chr10 I 357 C 0 s rheMac3.chr19 60715027 150 + 64156825 tgcccctcctccctcagacccaggag-tccaggccc-ccagcccctcctccctca-------------------------------------------gacccagaagtccagatccccagcccctcctccctcagacccagaagtccaggtccca------------------gcccctcctccctcagacccagaagtccagg-tcccagcc i rheMac3.chr19 I 6 C 0 s macFas5.chr19 55874079 76 + 59248254 agtccctcctccctcagacccagaag-tccagg-cc-ccagcccctcctccctca-------------------------------------------gacccaggagt-------------------------------------------------------------------------------------------ccagg-tcccagcc i macFas5.chr19 I 446 C 0 s papAnu2.chr19 47962400 79 + 51301725 tgtccctcctccctcagacccaggag-tccaggccc-ccagcccctcctccctca-------------------------------------------gacccagggat------------------------------------------------------------------------------------------tccaggcccccagcc i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 47663049 77 + 50890351 Tgcccctcctccctcagacccaggag-tccagaccc-ccagcccctcctccctca-------------------------------------------gacccaggagt-------------------------------------------------------------------------------------------ccagg-tcccagcc i chlSab2.chr6 I 6 I 235 s calJac3.chr22_GL285922_random 71178 78 + 138250 agcccctcctcccttagacccaggag-tccagggcc-ccagcccctgcttcctca-------------------------------------------gacccaggagtccag------------------------------------------------------------------------------------------gg-ccccagcc i calJac3.chr22_GL285922_random I 6 C 0 s canFam3.chr1 20146957 77 - 122678785 ---CCCTCCTCCCTCAGACTCTGCAGATCCTGGTCCACCAGCACCTCCTCCCTCA-------------------------------------------GACCCTGGAGTCCTG------------------------------------------------------------------------------------------GC-CCCCAGCA i canFam3.chr1 C 0 C 0 a score=76335.000000 s hg38.chr19_GL949747v2_alt 716778 19 + 729520 cctcctccctcagacccaa s panTro4.chr19 59984278 19 + 63644993 cctcctccctcagacccaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56937809 19 + 60714840 cctcctccctcagacccaa i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 103407084 19 - 106955855 cctcctccctcagacccaa i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 60715177 19 + 64156825 cctcctccctcagacccaa i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55874155 19 + 59248254 cctcctccctcagacccaa i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47962479 19 + 51301725 cctcctccctcagacccag i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47663361 19 + 50890351 cctcctccctcagacccag i chlSab2.chr6 I 235 I 1 s calJac3.chr22_GL285922_random 71256 19 + 138250 cctcctccctcagactcag i calJac3.chr22_GL285922_random C 0 I 216 s canFam3.chr1 20147034 19 - 122678785 CCTCCTCCCTCAGACCTGG i canFam3.chr1 C 0 I 6 a score=29859.000000 s hg38.chr19_GL949747v2_alt 716797 13 + 729520 aggcctcggaccc s panTro4.chr19 59984297 13 + 63644993 aggcctcggaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56937829 13 + 60714840 aggcctcggaccc i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 103407104 13 - 106955855 aggccTTGGAACC i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 60715197 13 + 64156825 AGGCCTCAGAACC i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55874175 13 + 59248254 aggcctcagaccc i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47962499 11 + 51301725 agtc--cagaccc i papAnu2.chr19 I 1 M 905 s chlSab2.chr6 47663381 11 + 50890351 agtc--cagaccc i chlSab2.chr6 I 1 C 0 s calJac3.chr22_GL285922_random 71491 13 + 138250 AGGCCTCGGACTC i calJac3.chr22_GL285922_random I 216 C 0 s canFam3.chr1 20147059 13 - 122678785 AGGTCCCTGACTC i canFam3.chr1 I 6 C 0 a score=681512.000000 s hg38.chr19_GL949747v2_alt 716810 256 + 729520 ATACCAAATGCTTCTATGAGATAGTTTTCTCCCCTTGTTCATGAAgaaatgagcccaggcccagtcagatctgcatctgtgtcac--agcccagggccactgtaaccttaggctactgacttccct-ctctgagcctctgttttctc--ctgtcaatg--------------------------------gggcaaggggtctgctccttCCCTCAAACCCCAACTCAGGTACAGTCAAGCACAGAAAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC s panTro4.chr19 59984310 256 + 63644993 acaCCAAATGCTTCTATGAGATAGTTTTCTCCCCTTGTTCATGAAgaaatgagcccaggcccagtcagatctgcatctgtgtcac--agcccagggccactgtaaccttaggctactgacttccct-ctctgagcctctgttttctc--ctgtcaatg--------------------------------gggCAAGGGGTCTGCTCCTTCCCTCAAACCCCAACTCAGGTACGGTCAAGCACAGAAAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56937842 258 + 60714840 acaCCGAATGCTTCTATGAGATAGTTTTCTCCACTTGCTCATGAAGAAATGAGCCCAGGCCCAGTCAGATCTGCATCTCTGTCAC--AGCCCAGGGCCACtgtaaccttaggctactgacttccct-ctctgagcctctgttttctcctctgtcaatg--------------------------------gggCAAGGGGTCTGCTCCTTCCCTCAAACCCCAACTCAGGTAGGGTCAAGCACAGAAAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103407117 252 - 106955855 ACACCGAATGCTTCTATGAGATAGTTTTCTCCACTTGCTCATGAAGAAATGA------GCCCAGTCAGATCTGCATCTGTGTCAC--AGCCCAGGGCCACtgtaaccttaggctactgacttccct-ctctgagcctctgttttctcctctgtcaatg--------------------------------gggCAAGGGGTCTGCTCCATCCCTCAAACCCCAACTCAGGTAGGGTCAAGCACAGAAAATACCTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60715210 258 + 64156825 ACACCGAATGCTTCTATGAGATAGTTTTCTCCACTTGCCCATGAAGAAATGAGCCCAGGCCCAGTCAGATCTGCATCTGTGTCAC--AGCCCAGAGCCACTGTAACTTTCGGCTACTGACCTCCCC-CTCTGAGCCTCTGTTTTCTCCTCTGTCCATG--------------------------------GGGCAAGGGGTCTGCTCCTTCCCTCAAACACCAACCCAGGTAGGGTCAAGCACAGGAAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55874188 258 + 59248254 acaCCGAATGCTTCTATGAGATAGTTTTCTCCACTTGCCCATGAAGCAATGAGCCCAGGCCCAGTCAGATCTGCATCTGTGTCAC--AGCCCAGAGCCACTGTAACTTTCGGCTACTGACCTCCCC-CTCTGAGCCTCTGTTTTCTCCTCTGTCCATG--------------------------------GGGCAAGGGGTCTGCTCCTTCCCTCAAACACCAACCCAGGTAGGGTCAAGCACAGGAAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47663392 258 + 50890351 acaCCGAATGCTTCTATGAGATAGTTTTCTCCACTTGCCCATGAAGAAATGAGCCCAGGCCCAGTCAGATCTGCATCTGTGTCAC--AGCCCAGGGCCACtgtaaccttcggctactgacttcccc-ctctgagcctctgttttctcctctgtccatg--------------------------------gggCAACGGGTCTGCTCCTTCCCTCAAACCCCAACCCAGGTAAGGTCAAGCACAGAAAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 71504 250 + 138250 ACACCGAGTGCATCTGTGAGGTGGTTTTCTCCACTTGCACATCAAGAAATGAGCCCAGGCCCAGTGAGATGTGCATCTGTGTCAC--AGCCCAGGGCCACtgtcacctgaggctactgacttccct-ctctgagc--ctgttttctcctctgtcagtg--------------------------------gggcaa-gggtctgctccctccctcaAACCCCAACCCAGGTAGGGTCAAGCACAG-AAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGC---- i calJac3.chr22_GL285922_random C 0 I 295 s canFam3.chr1 20147072 280 - 122678785 CTATGGAACGCCTATATGAGG---------ACATTTGCACATGAAgaag-gggcctggtctttgtcagatctgcatttgtgtcacctggcccaggtccactgtgaccttgggctagtggcctccccactctgagcctctgtcttct---gtgcccgtggacaccaatcccagcactgcctgcctcacagagAGTAAGGGGTCTGCTCCTCTCTGCAGACCCCAACCCAGGCAGGACCAAGCTCAGAAGGTACTTGTGGCACGGATGGGATAAGGACCCAGCGTGGCAGAAGTT i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47962510 905 + 51301725 M a score=1008274.000000 s hg38.chr19_GL949747v2_alt 717066 479 + 729520 AAAGAAAGAGAAGCGTAAGGGCCCTCCTTCCA-CCCCTACCTCCCCCACCCGCTGCTACACGCACCAGGACCACCTGCTGGGTAGCCAGGAGCTCACAG-TC-TAGCCCCGCTGGCCACCCCTGCAGCCCCC-ATCCTTCACTCAGGCAGTTGCAGGGCCCAGAACACCCCT----ATCTTCTAGGA-TTGACACTGGCTGTCAAACTCATCCTTCAAGGTGATTCCTGGCCTGC----------------------CCTCCTCCTCCAGGCAGCCTGTCCTCCTCCTCCAGGCAGCCTGTCCTGACCCTCAGCAGCCTCTCCT-GGCCTTGGCAGAGCCCCTCGTGTCCTCCCTTGCAGCACGC-----ATGGGAAGAAAGGCCATCGTCCTC---GCCATTGCTAACAC-CAGCCTTGCGTTTCCTCTTTGCCAGGTACTGTATTGACAACTC----TCTATAACCTGACTTTATCCTCCCAATAAGCTGGGTGTGGTGggtggctcatgcctgtcatccca s panTro4.chr19 59984566 479 + 63644993 AAAGAAAGAGAAGTGTAAGGGCCCTCCTTCCA-CCCCTACCTCCCCCACCCGCTGCTACACACACCAGGACCACCTGCTGGGTAGCCAGGAGCTCACAG-CC-TAGCCCCGCTGGCCACCCCTGCAGCCCCC-ATCCTTCACTCAGGCAGTTGCATGGCCCAGAACACCCCT----ATCTTCTAGGA-TTGACACTGGCTGTCAAACTCATCCTTCAAGGTGATTCCTGGCCTGC----------------------CCTCCTCCTCCAGGCAGCCTGTCCTCCTCCTCCAGGCAGCCTGTCCTGACCCTCAGCAGCCTCTCCT-GGCCTTGGCAGAGCCCCTTATGTCCTCCCTTGCAGCATGC-----ATGGGAAGAAAGGCCATCGTCCTC---GCCATTGCTAACAC-CGGCCTTGCGTTTCCTCTTTGCCAGGTACTGTATTGACAACTC----TCTACAACCTGACTTTATTCTCCCAATAAGCTGGGTGTGGTGggtggctcatgcctgtcatccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56938100 497 + 60714840 AAAGAAAGAGAAGCGTAAGGGCCCTCCTTCCA-CCCCTACCTCCCCCACCCGCTGCTACACACACCAGGACCACCTGCTGGGTAGCCAAGAGCTCACAG-CC-TAGCCCCACTGGCCACCCCTGCAGCCCCC-CTCCTTCACTCAGGCAGTTGCACGGCCCAGAACACCCCT----ATCTTCTAGGA-TTGACACTGGCTGTCAAACTCATCCTTCAAGGTGATTACTGGCCTGCCCTCCTCCTCCAGGCAGCCTGTCCTCCTCCTCCAGGCAGCCTGTCCTCCTCCTCCAGGCAGCCTGTCCTGACCCTCAGCAGCCTATCCT-GGCCTTGGCAGAGCCCCTCGTGTCCTCCCTTGCAGCACCC-----ATGGGAAGAAAGGCCATCGTCCTC---GCCGTTGCTAACAC-CGGCCTTGCGTTTCCTCTTTGCCAGGTACTGTATTGACAACTC----TCTACAACCTGACTTTATCCTCCCACCAAgctgggcgt----ggtggctcatgcctgtcatccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103407369 453 - 106955855 AAAGAAAGAGAAGCATAAGGGCCCTCCTTCTA-CCCCTACCTCCCCCACCCGCTGCTGCACACACCAGGACCACCTGCTGGGTAGCCAGGAGCTCACAGCCC-TAGCCCCGCTGGCCACCCCTGCAGCCGCC-CTCCTTCACTCAGGCAGTCTCATGGCCCAGAACACCCCT----ATCTTCTAGGA-TTGACACTGGCTGTCAAACTCATCCTTCAAGGTGATTCCTGGCCTGC----------------------CCTCCTCCTCCA-----------------------GCAGCCTGTCCTGACCCTCAGCAGCCTCTCCT-GGCCTTGGCAGAGCCCCTCGTGTCCTCCCTTGCAGCACGC-----ACGGGAAGAAAGGCCATCGTCCTC---GCCATTGCTAACAC-CGGCCTTGCGTCTCCTCTTTGCCAGATACTGTATTGACAACTC----TCTACAATCTGAGTTTATCCTCCCAATAAgctgggtat----gatggctcatgcctgtcattcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60715468 456 + 64156825 AAAGAAAGAGAAGTATAAGGGCCCTCCTTCCACCCCCTACCTCTCCCACCTGCTGCTTCACACACCAGGACCACCTGCTGGGTAGCCAGGAGCTCACAG-CAGGAGCCCCGCTGGCCACCCCTGCAGCCCCC--TCCTTCATTCAGGCAGTTTCATGGCCTGGAACACTCCTC---ATCCTCTAGGATTTGACACTGGCTGTCAAACTCGTCCTTCAAAGTGATTCCTGGCCTGC----------------------CCTCCTCCTCTA----------------------GGCAGCCTGTCCTGACCCTCAGCAGCCTCTCCT-GGCCGTGGCAGAGCCCTTCGTGTCCTCCCTTGCACCACGC-----ACGGGAAGAAAGGCCATCATCCTC---GCCATTGCTAACAC-CGGCCTTGCGTTTCCTCTTTGCCAGGTACTGTATTGACAACTC----TCTACAACCTCACTTCATCCTCCTaataagctgggcgt----ggtggctcatgcctgtcatccca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55874446 456 + 59248254 AAAGAAAGAGAAGTATAAGGGCCCTCCTTCCACCCCCTACCTCCCCCACCTGCTGCTTCACACACCAGGACCACCTGCTGGGTAGCCAGGAGCTCACAG-CAGGAGCCCCGCTGGCCACCCCTGCAGCCCCC--TCCTTCATTCAGGCAGTTTCATGGCCTGGAACACTCCTC---ATCCTCTAGGATTTGACACTGGCTGTCAAACTCGTCCTTCAAAGTGATTCCTGACCTGC----------------------CCTCCTCCTCTA----------------------GGCAGCCTGTCCTGACCCTCAGCAGCCTCTCCT-GGCTGTGGCAGAGCCCTTCGTGTCCTCCCTTGCACCACGC-----ACGGGAAGAAAGGCCATCATCCTC---GCCATTGCTAACAC-CGGCCTTGCGTTTCCTCTTTGCCAGGTACTGTATTGACAACTC----TCTACAACCTCACTTCATCCTCCTaataagctgggcgt----ggtggctcatgcctgtcatccca i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47663650 455 + 50890351 AAAGAAAGAGAAGCATAAGGGCCCTCCTTCCACCCCCTACCTCCCCCACCCGCTGCTTCACACACCAGGACCACCTGCCGGGTAGCCAGGAGCTCACAG-CC-TCGCCCTGCTGGCCACCCCTGCAGCCCCC--TCCTTCATTCAGGCAGTTTCATGGCCCGGAACACCCCTC---ATCCTCTAGGATTTGACACTGGCTGTCAAACTCGTCCTTCAAAGTGATTCCTGGCCTGC----------------------TCTCCTCCTCGA----------------------GGCAGCCTGTCCTGACCCTCAGCAGCCTCTCCT-GGCCGTGGCAGAGCCCTTCGTGTCCTCCCTTGCAGCACGC-----ACGGGAAGAAAGGCCATCATCCTC---GCCATTGCTAACAC-CGGCCTTGCGTTTCCTCTTTACCAGGTACTGTATTGACAACTC----TCTACAACCTCACTTCATCCTACTaataagctgggcgt----ggtggctcatgcctatcatccca i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 72049 429 + 138250 aaagaaagaaaAGCATAAGGGTGCTCCTTCCAACCCCCACCTGCCCCACGCCCTGCTGTACACG--AGGACCACCTACTAGGGA-CCGCAACCTAACAG-AC----GCCCACCCCCCACCCCAGCAGCCCTCCCTCCTCCACTCAGGCCGTTTCACGGCC-------CCCTT----GTCCTCTAGGATTTCACACTGGCCGTGAAGCTCGCCCTTCAAGTTGATCCCTGGCCTGC----------------------CCTCCTCCTCCA----------------------CGCAGCCTGTCCTGACCCTCAGCAGCCTC------------------CCCATCGTGGCCTCCCCTGCAGCACAC-----AGGGGAAGAAAGCCCACCACCTCC---ACCAATGCTAACGC-AGGCCTTgcatttcctctgtgcccggtgctgtgtggccaactctgtatgtacaacattacttgatcctcccaataagctgggcgc----cgtggcgcatgcctgtggt-cca i calJac3.chr22_GL285922_random I 295 C 0 s canFam3.chr1 20147352 399 - 122678785 ------------------GGACCCTCATGCCTCTCCCTACAGCTCC------CTGG----------AGAACCACCTGGGATGTGCCCAGCAGTACATGG-CC-TGGCC-----AGCTGCCCCT-----CCCC--TCCGAGGCTCAGGCAGTTATGTGgcctggaacactcctccctctccttcagg--ccacctcgggctgccaaacttgctggtctggttcagctccagctgcc----------------------cctcctcctcca----------------------ggaagcctgccctga-cctcagcagccccccctgggcttctgcagcaccctttgcatcccccatcacaccacACTATGTACGGAAGGAAAGCCCACCATCTCCACTGCTGTTGctaacactcaacctagcatctcctcattgccaggaactgtgcagagagctc----tccataacgtcatttaatcctcccaat---------gt-----------------tgtgatccca i canFam3.chr1 C 0 I 212 e papAnu2.chr19 47962510 905 + 51301725 M a score=32325.000000 s hg38.chr19_GL949747v2_alt 717545 13 + 729520 gcacttcgggagg s panTro4.chr19 59985045 13 + 63644993 gcacttcgggagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56938597 13 + 60714840 gcacttcaggagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103407822 13 - 106955855 gcacttcgggagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60715924 13 + 64156825 gcactttgggagg i rheMac3.chr19 C 0 I 411 s macFas5.chr19 55874902 13 + 59248254 gcactttgggagg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47664105 13 + 50890351 gcactttgggagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 72478 13 + 138250 gcactttgggagg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20147751 212 - 122678785 I e papAnu2.chr19 47962510 905 + 51301725 M a score=30700.000000 s hg38.chr19_GL949747v2_alt 717558 23 + 729520 ataaggcaggagtatcacatgag s panTro4.chr19 59985058 23 + 63644993 acgaggcaggagtatcacatgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56938610 23 + 60714840 atgaggcaggagtatcacttgag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103407835 23 - 106955855 acgaggcaggagtatcacatgag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55874915 23 + 59248254 ttgaagcaggatgatcacttgag i macFas5.chr19 C 0 I 1 s chlSab2.chr6 47664118 23 + 50890351 tcaagacaggaggatcacttgag i chlSab2.chr6 C 0 I 383 s calJac3.chr22_GL285922_random 72491 23 + 138250 gcgaggcaggaggatgatttgag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20147751 212 - 122678785 I e papAnu2.chr19 47962510 905 + 51301725 M e rheMac3.chr19 60715937 411 + 64156825 I a score=41212.000000 s hg38.chr19_GL949747v2_alt 717581 40 + 729520 cccaggagttg---------gaga---------------ccagcctgggcaacataaggagact s panTro4.chr19 59985081 40 + 63644993 cccaggagttg---------gaga---------------ccagcctgggcaacataaggagact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56938633 40 + 60714840 cccaggagttg---------gaga---------------ccagcctgggcaacatagggagact i ponAbe2.chr19 C 0 I 3064 s nomLeu3.chr10 103407858 40 - 106955855 cccaggagttg---------gaga---------------ccagcctgggcaacacagggagatt i nomLeu3.chr10 C 0 I 6 s macFas5.chr19 55874939 64 + 59248254 ggcggaggttgcagtgaaccgagattatggccctgcactccagcctgggcaatagagggagact i macFas5.chr19 I 1 C 0 s calJac3.chr22_GL285922_random 72514 40 + 138250 cccaggagctg---------gaga---------------ccagcctgggcaatatagggagact i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20147751 212 - 122678785 I e chlSab2.chr6 47664141 383 + 50890351 I e papAnu2.chr19 47962510 905 + 51301725 M e rheMac3.chr19 60715937 411 + 64156825 I a score=2296.000000 s hg38.chr19_GL949747v2_alt 717621 3 + 729520 cta s panTro4.chr19 59985121 3 + 63644993 cta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103407904 3 - 106955855 tta i nomLeu3.chr10 I 6 C 0 s macFas5.chr19 55875003 3 + 59248254 cta i macFas5.chr19 C 0 I 345 s calJac3.chr22_GL285922_random 72554 3 + 138250 cta i calJac3.chr22_GL285922_random C 0 I 80 e canFam3.chr1 20147751 212 - 122678785 I e ponAbe2.chr19 56938673 3064 + 60714840 I e chlSab2.chr6 47664141 383 + 50890351 I e papAnu2.chr19 47962510 905 + 51301725 M e rheMac3.chr19 60715937 411 + 64156825 I a score=1663.000000 s hg38.chr19_GL949747v2_alt 717624 30 + 729520 cta-tatatatgtgta------------------------------tatatatttatatat s panTro4.chr19 59985124 60 + 63644993 cta-tctatctatctatctatctatctatctatctatctatctagctatctatctatctat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103407907 31 - 106955855 ctattatatatgtata------------------------------tatatatgtatgtat i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20147751 212 - 122678785 I e ponAbe2.chr19 56938673 3064 + 60714840 I e calJac3.chr22_GL285922_random 72557 80 + 138250 I e chlSab2.chr6 47664141 383 + 50890351 I e papAnu2.chr19 47962510 905 + 51301725 M e macFas5.chr19 55875006 345 + 59248254 I e rheMac3.chr19 60715937 411 + 64156825 I a score=180.000000 s hg38.chr19_GL949747v2_alt 717654 1 + 729520 a s panTro4.chr19 59985184 1 + 63644993 a i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103407938 1 - 106955855 a i nomLeu3.chr10 C 0 I 115 s calJac3.chr22_GL285922_random 72637 1 + 138250 g i calJac3.chr22_GL285922_random I 80 C 0 e canFam3.chr1 20147751 212 - 122678785 I e ponAbe2.chr19 56938673 3064 + 60714840 I e chlSab2.chr6 47664141 383 + 50890351 I e papAnu2.chr19 47962510 905 + 51301725 M e macFas5.chr19 55875006 345 + 59248254 I e rheMac3.chr19 60715937 411 + 64156825 I a score=86662.000000 s hg38.chr19_GL949747v2_alt 717655 109 + 729520 gtctgagatgggaggatcaccccagtaggtcgagactgcagtgagctgtgattatgacactgcattctagcctgggccacagaactagaccttgtctcaattaag--aaaa s panTro4.chr19 59985185 111 + 63644993 gtctgagatgggaggatcaccctagtaggtcgaggctgcagtgagctgtgattatgacactgcattccagcctgggccacagaactagaccttgtctcaattaagaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56941737 110 + 60714840 gtctgagaggggaggatcactccagtaggtcgaggctgcagtgagctgtgattatgacactgcattctagcctgggccacagaaagagaccttgtctcaattaaa-aaaaa i ponAbe2.chr19 I 3064 C 0 s nomLeu3.chr10 103408054 109 - 106955855 gtctgagaggggaggatcgctccagtaggtccaggctgcagtgagctgtgattatgacactgcattctagcctgggccacagaacgagaccttgtctcaattaaa--aaaa i nomLeu3.chr10 I 115 C 0 s calJac3.chr22_GL285922_random 72638 109 + 138250 gtctgagacgggaggatcgccccagtacgtcaaggctgcagtgagctgagattatgacactgccttctaacctgggccacagaatgagaccctgtctcaaaaaag--aaaa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20147751 212 - 122678785 I e chlSab2.chr6 47664141 383 + 50890351 I e papAnu2.chr19 47962510 905 + 51301725 M e macFas5.chr19 55875006 345 + 59248254 I e rheMac3.chr19 60715937 411 + 64156825 I a score=2548.000000 s hg38.chr19_GL949747v2_alt 717764 1 + 729520 a s panTro4.chr19 59985296 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56941847 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103408163 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60716348 1 + 64156825 a i rheMac3.chr19 I 411 C 0 s macFas5.chr19 55875351 1 + 59248254 a i macFas5.chr19 I 345 C 0 s chlSab2.chr6 47664524 1 + 50890351 a i chlSab2.chr6 I 383 C 0 s calJac3.chr22_GL285922_random 72747 1 + 138250 a i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20147751 212 - 122678785 I e papAnu2.chr19 47962510 905 + 51301725 M a score=3276.000000 s hg38.chr19_GL949747v2_alt 717765 1 + 729520 a s panTro4.chr19 59985297 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56941848 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103408164 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60716349 1 + 64156825 a i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55875352 1 + 59248254 a i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47664525 1 + 50890351 a i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 72748 1 + 138250 a i calJac3.chr22_GL285922_random C 0 I 1088 s canFam3.chr1 20147963 1 - 122678785 a i canFam3.chr1 I 212 C 0 e papAnu2.chr19 47962510 905 + 51301725 M a score=57530.000000 s hg38.chr19_GL949747v2_alt 717766 25 + 729520 aatggggataataggacccattcca s panTro4.chr19 59985298 25 + 63644993 aatggggataataggacccattcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56941849 25 + 60714840 aaTGGGGATAATAGGACCCATTCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103408165 25 - 106955855 aaTGGGGATAATAGGACCCATTCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60716350 25 + 64156825 aatggggataagaggacccattcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55875353 25 + 59248254 aatggggataagaggacccattcca i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47664526 25 + 50890351 aatggggataagaggacccattcca i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20147964 25 - 122678785 aagggggataatggaatccgtttca i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e papAnu2.chr19 47962510 905 + 51301725 M a score=1135854.000000 s hg38.chr19_GL949747v2_alt 717791 442 + 729520 taggatgtggtgaggattaTGCAT--acacacacacaca------cacaca------cacacacaTTTATGATGTACTG---AGAAGATATAAGCACAC------------------AATAAGTATCTCcaaaattatcaagtggcaaagccaggattcagacccacacctgcccgaggctctctgccatcagaccacactata--------tctctTTCTCTCTGTTCCTTCATCCCCATCAATCGAAGGC--AAAAATGTGCCTTCTCTGATTTCCAGGCTCACTCAGCATAGACCGTGGAGGCAACATATCTTGAATGAAGCAACAAAGCAGTAATGCACATGAATGCACCAAATGCCAAAAGCtcgtttactcaacaagtatctctccaacactttctatgtgctagacccaattctgtgtgctgcagattaagtggaggactgatcacacaaaaatctttgccctt-gtgaagcttgca-tttt s panTro4.chr19 59985323 441 + 63644993 taggatgtggtgaggattaTGcatacacacacacacaca------cacaca------cacacacaTTTATGATGTACTG---AGAAGATATAAGCACAC------------------AATAACTATCTCCAAAATGATCaagtggcaaagccaggattcagacccacacctgcccgaggctctctgccatcagaccacactata--------tctctTTCTCTCTGTTCCTTCATCCCCATCAATCCAAGGC--AAAAATGTGCCTTCTCTGATTTCCAGCCTCACTCAGCATAGACCATGGAGGCAACATATCTTGAATGAAGCAACAAAGCAATAATGCACATGAATGCACCAAATGCCAAAAGCtcgttcactcaacaagtatctctccaacactttctatgtgctagacccaattccatgtgctgcagattaagtgggggactgatcacacaaaaatctttgccctt-gtgaagcttgca----t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56941874 445 + 60714840 TAGGATGTGTTGAGGATTATGcatacacacacacacaca------cacaca------cacacacaTTTATGATGTACtg---agaagatataagcacac------------------aataagtatctccaaaattatcaagtggcaaagccaggattcagacccacacctgcccgaggctctctgccatcagaccacactata--------tctctTTCTCTCTGTTCCTTCATCCCCATCAATCCAAGGC--AAAAATGTGCCTTCTCTGATTTCCAGCCTCACTCACCATAGACCGTGGAGGCAACATATCTTGAATGAAGCAATGAAGCAATAATGCACATAAATGCACCAAATGCCAAAAGCttgttcactcaacaagtatctctccaacactttctatgtgctagaaccaattccgtgtgctgcagattaagtgggggactgatcacacaaaaatctttgccctt-gtgaagcttgcattttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103408190 436 - 106955855 TAGGATGTGTTGAGCATTATGcat----acacacacacg------cacaca------cacgcacaTTTATGATGTACTG---AGAAGATATAAGCACAC------------------AATAAGTATCTCcagaattatcaagtggcaaagccaggattcagacccacacctgcccgaggctctctgccatcagaccacactata--------tcCCTTTCTCTCTGTTCCTTCATCCCCATCAATCCAAGGC--AAAAACGTGCCTTCTCTGATTTCCAGCCTCACTCAGCATAGACCATGGAGGCAACGTATGTTGAATGAAGCAATGAAGCAATAATGCACACGAATGCACCAAATGCCAAAAGCtcgttcactcaacaagtatctctccaacactttctatgtgctagacccaattccgtgtgctgcagattaagtgggggactaatcacacaaaaatctttgccctc-gtgaagcttgct----- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60716375 449 + 64156825 taggatatggtgtggattaTGcacacacacacacacaca--cgcacacgca------cacacacaTTTATGATGTACTGAGAAGAAGATATAAGCACAC------------------AATAAGTATCTCCAAAATTATGCagtggcaaagccaggattcagacccacacctgcccaaGGCTCTCTGCCGTCAGACCACACTATA--------TCTCTTTCTCTCTGTTCCTTCATTCCCATCAATCTAAGGCAAAAAAACATGCCTTCTCTGATTTCCAGCCTCACTCAGCATAGACTGTGGAGGCAACATATCTTGAATGAAGCAATGAAGCAATAATGCACATGAATGCACCAAATGCCAAAAGCtcattcactcaacaagtatctctccaacacttcctgtgtgctagacccaattccgtgtgctgcagactaagtcggggactgaccacacaaaaatctttgccctt-gtgaagcctgca----- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55875378 447 + 59248254 taggatatggtgaggattatgcacacacacacacacaca----cacacgca------cacacacatttatgatgtactgagaagaagatataagcacac------------------aataagtatctccaaaattatgcagtggcaaagccaggattcagacccacacctgcccaaggctctctgccgtcggaccacactata--------tctctTTCTCTCTGTTCCTTCATTCCCATCAATCCGAGGCAAAAAAACATGCCTTCTCTGATTTCCAGCCTCACTCAGCATAGACTGTGGAGGCAACATATCTTGAATGAAGCAATGAAGCAATAATGCACATGAATGCACCAAATGCCAAAAGCtcattcactcaacaagtatctctccaacacttcctgtgtgctagacccaattccgtgtgctgcagactaagtcggggactgaccacacaaaaatctttgccctt-gtgaagcctgca----- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47963447 453 + 51301725 TAGGATATGGTGAGGattatgcacgcacacacacacacacacacacacgca------cacacacatttatgatgTACTGAGAAGAAGATATAAGCACAC------------------AATAAGTATCTCCAAAATTATgcagtggcaaagccaggattcagACCCACACCTGCCCAAGGCTCTCTGCCGTCAGACCACActata--------tctctttctctctgttccttcATTGCCATCAATCCAAGGC-AAAAAACATGCCTTCTCTGATTTCCAGCCTCACTCAGCATAGACTGTGGAGGCAACATATCTTGAATGAAGCAATGAAGCAATAATGCACATGAATGCACCAAATGCCAAAAGctcattcactcaacaagtatCTCTCCAACA-TTCCTGTGTGCTAGACCCAATTCCATGTGCTGCAGATTAAGTAGGGGACTGACCACACAAAAATCTTTGCCCTT-GTGaagcctgca-tttt i papAnu2.chr19 M 905 C 0 s chlSab2.chr6 47664551 453 + 50890351 tagggtatggtgaggattaTGcacacacacacgcacgca--cacacacgcacgcacgcacacacaTTTATGATGTACTGAGAAGAAGATATAAGCACAC------------------AATAAGTATCTCCAAAATTATGCagtggcaaagccaggattcagacccacacctgcccaaGGCTCTCTACCGTCAGACCACACTATA--------TCTCTTTCTCTCTGTTCCTTCATTCCCATCAATCCAAGGC-AAAAAACATGCCTTCTCTGATTTCCAGCCTCACTCAGCATAGACTGTGGAGGCAACATATCTTGAATGAAGCAATGAAGCAATAATGCACATGAATGCACCAAATGCCAAAAGCtcattcactcaacaagtatctctccaacacgtcctgtgtgctagacccaattccgtgtgctgcagattaagt-agggactgaccacacaaaaatctttgccctt-gtgaagcttgca----- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20147989 412 - 122678785 taggatgctgtgaggattagatgtgcgcacagacaagca---------gcg---------------------tgtactcagaagaaggcagaagcacacccacagtaggtattgagtaatgagtattatCAACACTGTTTAATGGC--AGTCAGAACCTGAACCCACACCCACCTG-GGCTCTCTGCCATCACACCACACCATATGATCGTCTCTCTTTCCCTCTACTCTTTCATCCCTGTCAGCCCAGGAC--AAAGGTGTGCTTTCTCTGGTTTCCAGCCTCCTTCGGCATAGACTATGGGGTTAACGTGTGGTGAACAAAACAATGGAGCA-TAATATATATGAATGCACCAAGGG--------------------caaatatcattccagcacttactgta----------------atgtgcagcag----agtgcagggctgaacgcacagatgtctttgtctttcgtgaaacttaca-ttct i canFam3.chr1 C 0 I 626 e calJac3.chr22_GL285922_random 72749 1088 + 138250 I a score=406113.000000 s hg38.chr19_GL949747v2_alt 718233 204 + 729520 tttttttttttttttgagatggagtcttgctctgtcacccaggctggagtgcagtggagca---atcttggctcactgcaatctccacctcccgggttcacgccattctcctgcctcagcctccggagtaggtgggactacaggcacccaccaccaagcctggttaattgttttgtatttttagtagagacggggtttcaccatgtt s panTro4.chr19 59985764 204 + 63644993 tttttttttttttttgagatggagtctcgctctgtcacccaggctggagtgcagtggagcg---atcttggctcactgcaatctccacctcctgggttcacgccattctcctgcctcagcctccggagtaggtgggactacaggcacccaccaccaagcctggttaattgttttgtatttttagtagagatggggtttcaccatgtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56942319 203 + 60714840 tttttttttttttttgagacagagtattgctctgtcacccaggctggagtgcagtggtgcg---atctcggctcactgcaagctccgcttcccaggttcctgccattctcctgcctcagcctccggagtagctgggactacaggcgcccgccaccatgcccggctaatt-ttttgtattgttagtggagacggggtttcaccgtgtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103408626 200 - 106955855 ----tttgtttttttcagacagagtctcactctgtcgcccaggctggagtgcagtggcgcg---atcttggctcactgcaagctccgcttccctggttcccgccattctcctgcctcagcctcctgagtagctgggactacaggcgcccaccaccaagcccagctaattgttttgtatttttagtacagacagggtttcaccgtgtt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60716824 204 + 64156825 --tttttttttttttttgatggaatcttgctctgtcacccaggctggagtgcagtggcatgatcatcttggctcactacaacctccacctcccaggttcaagcaactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccaccaactccggctaatt-gtttgtatttttagtagaaattgggttttatcatgtt i rheMac3.chr19 C 0 I 3342 s macFas5.chr19 55875825 204 + 59248254 --tttttttttttttttgatggaatcttgctctgtcacccaggctggagtgcagtggcatgatcatcttggctcactacaacctccacctcccaggttcaagcgactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccaccaactccggctaatt-gtttgtatttttagtagaaattgggttttatcatgtt i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47963900 206 + 51301725 tttttttttttttttttgatggaatcttgctctgtcacccaggctggagtgcagtggcatgatcatctcggctcactacaacctccacctcccaggttcaagcgactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccaccaactccggctaatt-gtttgtatttttagtagaaattgggttttatcatgtt i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 47665004 206 + 50890351 ttttttttttttttttggatggaatcttgctctgtcacccaggctggagtgcagtggcatgatcatctcggctcactacaacctccacctcccaggttcaagcaactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccaccaactccggctaatt-ttttgtatttttagtagaaatggggttttatcatgtt i chlSab2.chr6 C 0 I 1847 e canFam3.chr1 20148401 626 - 122678785 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I a score=74060.000000 s hg38.chr19_GL949747v2_alt 718437 83 + 729520 agccaggatggtctca----------------atctcctgacctc--gtgatccacacgcctcggcctcccaaagtgctgggattacaggcgtgagccacc s panTro4.chr19 59985968 83 + 63644993 agccagggtggtctca----------------atctcctgacctc--gtgatccacacgccttggcctcccaaagtgctgggattacaggcgtgagccacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56942522 83 + 60714840 agccagaatggtctcg----------------atctcctgacctt--gtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccacc i ponAbe2.chr19 C 0 I 378 s nomLeu3.chr10 103408826 83 - 106955855 agccaggatggtatcg----------------atctcctgacctc--gtgatccgccggcctcggcctcccaaagtgctgggattacaggcgtgagccacc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55876033 101 + 59248254 ACgtggtgtgatctcaggtgactgcaacgtccacctcctgggttcaagtgattttcttgtctcagccccccaagaagctgggattacaggtgtgcaccacc i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47964110 101 + 51301725 acatggtgtgatctcaggtgactgcaacgtccacctcctgggttcaagtgattttcttgtctcagccccccaagaagctgggattacaggtgtgcaccacc i papAnu2.chr19 I 4 C 0 e canFam3.chr1 20148401 626 - 122678785 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e chlSab2.chr6 47665210 1847 + 50890351 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=73951.000000 s hg38.chr19_GL949747v2_alt 718520 164 + 729520 acacccggccGCttttttttttttta----agatggagtctcgctctgtcacccaggctggagtgcagtggcacgatcatctcggttcactgcaacctccacctcccaggttcaagtgactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccac s panTro4.chr19 59986051 161 + 63644993 acacccggccGC---Attttttttta----agatggagtctcgctctgtcagccaggctggagtgcagtggcatgatcatctcgtctcactgcaacctccacctcccaggttcaagtcactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103408909 163 - 106955855 gcacccggccAC-Atttttttttttt----agatggaatctcgctctgtcacccaggctggagtgcagtggcgtgatcatctcggctcactgcaacctccacctcccagtttcaagcgactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55876134 134 + 59248254 acctccggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggttgg----------------------------------tctcgaactcccaacctcgagtgatccacccacctcagcctcccaaagtgctgggattacaggcatatgccac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47964211 134 + 51301725 acctccggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggttgg----------------------------------tctcgaactcccaacctcgagtgatccacccacctcagcttcccaaagtgctgggattacaggcatatgccac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e chlSab2.chr6 47665210 1847 + 50890351 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=600.000000 s hg38.chr19_GL949747v2_alt 718684 1 + 729520 c s panTro4.chr19 59986212 1 + 63644993 c i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103409072 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55876268 1 + 59248254 c i macFas5.chr19 C 0 I 2541 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e chlSab2.chr6 47665210 1847 + 50890351 I e papAnu2.chr19 47964345 0 + 51301725 C e rheMac3.chr19 60717028 3342 + 64156825 I a score=14981.000000 s hg38.chr19_GL949747v2_alt 718685 64 + 729520 aactctggctaatttttttt-tttttagtagaaatggggttttatcatgttggtgacatggtgtg s panTro4.chr19 59986213 61 + 63644993 aactctggctaa---ttttt-tttttagtagaaatggggttttatcatgttggtgacatggtgtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103409073 65 - 106955855 aactctggctaattttttgtatttttagtagaaatgaggttttatcatgttggTGACATGGTGTG i nomLeu3.chr10 C 0 I 1689 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e chlSab2.chr6 47665210 1847 + 50890351 I e papAnu2.chr19 47964345 0 + 51301725 C e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=20348.000000 s hg38.chr19_GL949747v2_alt 718749 225 + 729520 atctcggctgactgcaacctccacctccggggttcaagcaattttcttgtctcagcctcccaagaagctgggattacaggtgtacaccaccacccccggctaattttcatattttcagtagagacgtgctttcaccatgttggccaggttggtctcgaactcccaacctcaagtgatcaatccgcctcagcctcccaaagtgctgggattacaggcatgtgccac s panTro4.chr19 59986274 225 + 63644993 atcttggctgactgcaacctccacctccggggttcaagcaattttcttgtctcagcctcccaagaaactgggattggaggtgtacaccaccacccccggctaattttcatattttcagtagagacgtgttttcaccatgttggccaggctggtctcgaactcccaacctcaagtgatccacccgcctcagcctcccaaagtgctgggattacaggcatgtgccac i panTro4.chr19 C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e nomLeu3.chr10 103409138 1689 - 106955855 I e chlSab2.chr6 47665210 1847 + 50890351 I e papAnu2.chr19 47964345 0 + 51301725 C e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=172517.000000 s hg38.chr19_GL949747v2_alt 718974 709 + 729520 cgtgcccagccTGtgaagcttgcattctaacggaggagacacagacaaaatgaaccaggaacacagtgggtaagaaggtgaaaagttctccacacaaaaatgaagtagggagagaggaaagagactacaaagaagttgggttgccgggggcggtggctcacacccataatcccagcactttgggaggccgaggcgggcagatcacgaggtcaagagatcgagaccatcctggccaacatggtgaaatgctgtctctactaaaagtacaaaattagccgggcgtggtggcgcgcgcctgtagtcccagctactcaggaggctgaggcaggagaatcacttgaacctgggggggcggaggttgcggtgagccaagattgcgccactgcactccagcctgggcaacaagagtgaaactctgtctc-aaaaaaaacaaa----------agaagtcgagtaagggatgccgccatttgaaacagggtggtcagccagtcctctgagaaggtgacattcaggcaaagatcaaaggaggcaagaaagtgaggcatgagggtatctggt-agaagagcattccaggcagaggaaacagcaagtgcaaaggccctgaggcaggaccgggtctggatgttccaagagcagcaaggaggccagtgtgctgacacacagaaggaagagatgagatcagaATCACGTCCCTTAAGGCCTTGCAAGATGTCAGC--- s panTro4.chr19 59986499 712 + 63644993 cgtgcccagccTGtgaagcttgcattctaacggaggagacacagacaaaatgaaccaggaacgcagtgggtaagaaggtgaaaagttctccacacaaaaatgaactagggagagaggaaagagactacaaagaagttgggttgccgggggcggtggctcacacccgtaatcccagcactttgggaggccgaggcaggcagatcacgaggtcaagagatcgagaccatcctggccaacatggtgaaatgctgtctctactaaaagtacaaaattagccgggcatggtggcgcgcgcctgtagtcccagctactcaggaggctgaggcaggagaatcacttgaacct-ggggggtggaggttgcggtgagccaagattgtgccactgcactccagcctgggcaacaagagcgaaactctgtctcaaaaaaaaacaaa----------agaagtcgagtaagggatgccgccatttgaaacagggtggtcacccagtcctctgagaaggtgacattcaggcaaagaccaaaggaggcaaggaagtgaggcatgagggtatctggt-agaagagcattccaggcagaggaaatagcaagtgcaaaggccctgaggcaggactgggtctggatgttccaagagcagcaaggaggccagtgtgctgacacacagaaggaagagaTGAGAACAGAATCACGTCCCTTAAGGCCTTGCAAGATGTCAGCttt i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47964345 709 + 51301725 cgtgcccggcctgtgaaGCTTGCATTCTAACAGAGGAGACACAGACAAAATCAACCAGGAATACAATGGGTAAGAAGGTGAAAAGTGCTCCACACAAAAATAAagtagggagagaggaaagagactaCAAAGAAGTTGggttgccaggcacggtggctcatgcctgtaatctcagcactttgggaggctgagacaggcagatcatgaggtcaagagatcgagaccatcc---------tggtgaaaccccatctctgctaaaaatacaaaattagccgggcgtggtagtgcgcacctgtagtctcagctactcaggaggctgaggcagaagaatggcttgaaccc-aagaggcggaggttgtggtgagctgagatcacaccactgcactacagcgtggccaacaagagcgaaactctgtctcaaaaagaaaaaaaaatcaaaaacaaaagtcaGGTAAGGGATGCCGCCATTTGAAACAGGGTGGTCACCCAGTC--CTGAGAAGGTGACATTCAGGCAAAGACCAAAGGAGGCAAGGAAGTGAGGCATGAGGGTATCTGGcaagaagagcattccaggcagagagaacagcaagtgcaaagccCTGAAGGCAGAACCGGGTCTTGGTGTTCCAAGAGCAGCAAGGAGGCCGGTGTGCTGACACACAGAAGGAAGAGATGAGATCAGAATCACATCCCTTAAGGCCTTGCAAGATGTCAGC--- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e nomLeu3.chr10 103409138 1689 - 106955855 I e chlSab2.chr6 47665210 1847 + 50890351 I e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=546.000000 s hg38.chr19_GL949747v2_alt 719683 1 + 729520 t s panTro4.chr19 59987211 1 + 63644993 t i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47965054 1 + 51301725 T i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 73837 1 + 138250 T i calJac3.chr22_GL285922_random I 1088 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e nomLeu3.chr10 103409138 1689 - 106955855 I e chlSab2.chr6 47665210 1847 + 50890351 I e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=2246.000000 s hg38.chr19_GL949747v2_alt 719684 3 + 729520 ttt s panTro4.chr19 59987212 3 + 63644993 ttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103410827 2 - 106955855 -tt i nomLeu3.chr10 I 1689 C 0 s papAnu2.chr19 47965055 3 + 51301725 TTT i papAnu2.chr19 C 0 I 1203 s calJac3.chr22_GL285922_random 73838 3 + 138250 ttt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e chlSab2.chr6 47665210 1847 + 50890351 I e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=1092.000000 s hg38.chr19_GL949747v2_alt 719687 2 + 729520 tt s panTro4.chr19 59987215 2 + 63644993 tt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103410829 2 - 106955855 tt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 73841 2 + 138250 tt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e chlSab2.chr6 47665210 1847 + 50890351 I e papAnu2.chr19 47965058 1203 + 51301725 I e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=-1909.000000 s hg38.chr19_GL949747v2_alt 719689 1 + 729520 -t s panTro4.chr19 59987217 1 + 63644993 -t i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103410831 1 - 106955855 -g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60720370 1 + 64156825 -t i rheMac3.chr19 I 3342 C 0 s calJac3.chr22_GL285922_random 73843 1 + 138250 a- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e chlSab2.chr6 47665210 1847 + 50890351 I e papAnu2.chr19 47965058 1203 + 51301725 I e macFas5.chr19 55876269 2541 + 59248254 I a score=5361.000000 s hg38.chr19_GL949747v2_alt 719690 8 + 729520 ttttcttc s panTro4.chr19 59987218 8 + 63644993 ttttcttc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103410832 8 - 106955855 ttttgttt i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 60720371 8 + 64156825 tttttttt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47966261 8 + 51301725 tttttttg i papAnu2.chr19 I 1203 C 0 s calJac3.chr22_GL285922_random 73844 8 + 138250 cgtttttg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e chlSab2.chr6 47665210 1847 + 50890351 I e macFas5.chr19 55876269 2541 + 59248254 I a score=23232.000000 s hg38.chr19_GL949747v2_alt 719698 16 + 729520 ttttttgagacagagt s panTro4.chr19 59987226 16 + 63644993 ttttttgagacagagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56942983 16 + 60714840 ttttttcagacagcgt i ponAbe2.chr19 I 378 C 0 s nomLeu3.chr10 103410841 16 - 106955855 ttttttcagacagcgt i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 60720379 16 + 64156825 ttttttgagacggagt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47966269 16 + 51301725 ttttttgagatggagc i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 73852 16 + 138250 ttttttgagatggggt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e chlSab2.chr6 47665210 1847 + 50890351 I e macFas5.chr19 55876269 2541 + 59248254 I a score=427854.000000 s hg38.chr19_GL949747v2_alt 719714 250 + 729520 ctcgctctgtcgcccaggctggagtgcaatggcgcaa-tctcggctcactgcaagctccgccttccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggtgc-ccaccaccacgcccggctaa----------------------ttgtttgtatttttagtagagacggggtttcaccgt----------------------------------gttagcca------ggatggtctcgatctcctgacctcgtg--ttccacccgcctcggcctcccaaagtgctgggattacagg s panTro4.chr19 59987242 250 + 63644993 ctcactctgtcgcccaggctggagtgcaatggcgcaa-tctcggctcactgcaagctctgccttccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgc-ccaccaccacgcccggctaa----------------------ttttttgtatttttagtggagacggggtttcaccgt----------------------------------gttagcca------ggatggtctcgatctcctgacctcgtg--atccacccgcctcggcctcccaaagtgctgggattacagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56942999 249 + 60714840 ctcactctgtcacccaggctggagtgcagcggcgtga-tctcggctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcctgagtagctgggattacaggtgc-ccgccaccacgcccagctaa----------------------tt-tttgtatttttagtagagacagggtttcaccat----------------------------------gttggcca------ggctggtctcgaactcctgacctcatg--atccgtccgcctcggcctcccaaagtgctgggattatagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103410857 249 - 106955855 ctcactctgtcgcccagcctagagtgcagtggtgtga-tctcggctcactgcaacctccgcttcctgggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgc-ccgccaccacgcccggctaa----------------------tt-tttgtatttttagtagagacagggtttcaccat----------------------------------gttggcct------ggctggtctcgaactcctgaccccgtg--atccgcctgcctcggcctcccaaagtgctgggattacagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60720395 238 + 64156825 ctcgctctgtcgcccaggctggagtgcagtggcgaga-tctcagctcactgcaagctccgcctcccgggttcacgccattctcctgccccagcctcccgagtagctggggctacaggcgc-ccacaaccgcgcccggctaa---------------------ttt-tttgtatttttagtagagacaggg-------------------------------------------gttcaccg---------tggtctcgatctcctgaccttgtg--atccgcccgcctcggcctcccaaagtgctgggattacagC i rheMac3.chr19 C 0 I 12 s papAnu2.chr19 47966285 304 + 51301725 ctggctttgttacccaggctggagtgcaatggtacaa-tattggctcattgcaacctccacctccggggttcaagtgattctcctgcctcagcctcctcactagctgggattacaggtgc-ccaccaccacgactggctaatttttgtgtttctttttttttttt-tttttttttttttttgagacagagtctcgctctgtcacccaggctggagtgtggtggccggatctcagctcactg---------caagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47667057 252 + 50890351 ctcgccctgttgcccaggctggagtgcagtggtgcgattatcggctcaccgcaacctccgcctcccaggttcaagtgattttcctgcctcagcctcctgaatagctgggattacaagtgc-ccgccaccacggccggctaa----------------------tt-tttgtgtttttagtagagatggggttttgtcat----------------------------------gttggctg------ggctggtctcgaactcctgacctcaagtgatccgcctgcctcggcctcccaaagtgctgggattacagg i chlSab2.chr6 I 1847 C 0 s calJac3.chr22_GL285922_random 73868 251 + 138250 cttgctctgttgcccaggctggagtgcagtggtgtga-tctcagctcactgcaacatccgtttcccaggtttaagcgattctcctgcctcagcctcctgagtagctggggttacaggtgcaccaccaccacgcctggcTAA----------------------TT-tttgtatttttgtttg-------tttgttttgt----------------------------------gtttgtttttttgAGGTGaacctctgcctcctgggttcaggcaattctcctgcctcagcctcccgagtagctgggatgacagg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e macFas5.chr19 55876269 2541 + 59248254 I a score=24801.000000 s hg38.chr19_GL949747v2_alt 719964 21 + 729520 tgtgagccactgcgcccggcc s panTro4.chr19 59987492 21 + 63644993 tgtgagccactgcgcccggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56943248 21 + 60714840 cgtgagccaccgcgcccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103411106 21 - 106955855 catgagccaccgcgcccagcc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47966589 21 + 51301725 cgcccgccacctcgcccggct i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 47667309 21 + 50890351 cgtgagccactgtacgtggcc i chlSab2.chr6 C 0 I 1 s calJac3.chr22_GL285922_random 74119 21 + 138250 cacgcaccaccacacccagct i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60720633 12 + 64156825 I a score=444907.000000 s hg38.chr19_GL949747v2_alt 719985 282 + 729520 TGttttctg--tttttt-----gagatggagcctcgctctcttgcctaggctggagtgcagtggtgcaattatcggctcgccgcaacctctgcctcccgggttcaagtgattttcctgcctcagcctcctgagtagctgggattacaggcacccgccaccacacctggat-aatttttgtgtttttagtacagatggggtttcaccatgttggctgggctggtctcgaactcctgtcctcaggtgatctgcctgcctcggcctcccaaagtgctgggattagagatgtga s panTro4.chr19 59987513 282 + 63644993 TGttttctg--tttttt-----gagatggagcctcgctctcttgcctaggctggagtgcagtggtgcaattatcggctcgccacaacctctgcctcccgggttcaagtgattttcctgcctcagcctcctgagtagctgggattacaggcacccgccaccacacctggat-aatttttgtgtttttagtagagatggggtttcaccatgttggctgggctggtctcgaactcctgtcctcaggtgatccgcctgcctcggcctcccaaagtgctgggattacagatgtga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56943269 282 + 60714840 TGTAttttg--tttttt-----gagatggagcctcgctctcttgcctaggctggagtgcagtggtgcaattatcggctcaccacaacctccgcctcccgggttcaagtgattttcctgcctcagcctcctgaatagctgggattacaggtgcccaccaccacacctggat-aatttttgtgtttttagtagagatggggtttcaccatgttggctggactggtctcgaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgctgggattacagatgtga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103411127 283 - 106955855 TGttttttgt-tttttt-----gagatggggcctcgctctcttgcctaggctggagtgcagtggtgcaattatcggctcatcgcaacctccgcctcccgggttcaagtgattttcctgcctcagcctcctgaatagctgggattacaggtgcccaccaccacacctggat-aatttttgtgtttttagtagaaatggggtttcaccatgttggctgggctggtctcgaactcctgacctcaggtgatctacctgcctcggcctcccaaagtgctgggattacagatgtga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60720645 267 + 64156825 tttttttt---tttttt-----gagacggagtctcgctctgtcgcccaggctggagttcagtggcgcga-tctcggctcactgcaagctccgcctcccgggttcacgccattctcctgccccagcctcccgagtagctgggactacatgcgcccacaaccgcgcccggctaattttttgtatttttagtagagacggggtttcaccgtg------------gtctcgatctcctgacctt--gtgatccgcccgcctcggactcccaaagcgctgggattacaggcgtga i rheMac3.chr19 I 12 C 0 s papAnu2.chr19 47966614 248 + 51301725 ttttttttgtatttttt-agtagagacggggtttcaccgtgttagccaggatgg----------------tctcg----------------atctcctgacctcgtg--atccacccgtctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggcctaatttttgtgtttctatcagagatggggttttgccatgttggccgggccagtctcgaactcctgacctcagatgatccacccgcctcggcctcccaaagtgctaggattaca------- i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 47667331 274 + 50890351 Gtttttttg--tttctt-----gagatggagcgtggctttgttgcctaggctggagtgcaatggtacaa-tattggctcattgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcctcactagctgggattacaggtgcccaccaccacggctggct-aatttttgtgtttttatcagagatggggttttgccgtgttggccaggccagtctcgaactcctgacctcagatgatccacctgcctcggcctcccaaagtgctgggattaca------- i chlSab2.chr6 I 1 C 0 s calJac3.chr22_GL285922_random 74140 244 + 138250 -aatttttg--tatttttagtagagacagggtttcaccttgttgaccaggatgg--------------------------------tctcaatctcttgacctcg-----------tgatccagcctcccaaagtgctgggattataggcatgtgccaccacacctggcctaatttttgtatttttagtagagacggggttttgccatgttggcatggctggtctcgaactcctgacttcaggtgatctgcctgcctcagcctcccaaagtgctgggattccaggcatga i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e macFas5.chr19 55876269 2541 + 59248254 I a score=103735.000000 s hg38.chr19_GL949747v2_alt 720267 56 + 729520 gccactgta--cccA--Tgcaagtttcttaacccttctcttcctca-ttttctcatctgtg s panTro4.chr19 59987795 56 + 63644993 gccattgta--cccA--Cgcaagtttcttaacccttctcttcctca-ttttctcatctgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56943551 56 + 60714840 gccactgca--cccA--Cgcaagtttcttaacccttctctgcctca-ttttctcatctgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103411410 56 - 106955855 gtcactgca--cccA--CAcaagtttcttaacccttctctgcctca-ttttctcatctgtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60720912 58 + 64156825 gccaccgcg--cccggccgcaagtttcttaactcttctctgcctca-ttttctcatgtgta i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47966862 50 + 51301725 ------gca--ccCA--CGCAAGTTTCTTAACCCttctctgcctca-ttttctcatgtgta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47667605 50 + 50890351 ------gCA--CCCA--CAcaagtttcttaacctttctctgcctca-ttttctcatctgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 74384 45 + 138250 gcccctgtg--cGCA--CTGAAG----------CTTCTCTGCCT-G-TTTCTTCATCTGTG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20149027 59 - 122678785 gcaaccgtaacctca--ggcaaatctcttcacccccatggggctcagtttcttcatctgtc i canFam3.chr1 I 626 C 0 e macFas5.chr19 55876269 2541 + 59248254 I a score=1109236.000000 s hg38.chr19_GL949747v2_alt 720323 382 + 729520 agacgaagacagcctcccacccagacacactcccctcacggggctctggggagaaatgatgtggaaagctttgctagtaacctctacagcatggagggagttCTGGAAAAGTGATTTCAGA----AAGGTGTTTATGCCTGGAAAGCCTGTTCATTTTTGTGATGTCCTTGGAGCTGGGCCAGGCA-TTATCGAGCTAAATCTTAGCTTTTGTCAGAA-TAGGGGG-----GTCATTGAGGGAAATTTCCAAAGGAAGGTGGAACGGGATGGGTGG----GGAGG---TAAGGGCATGAGCAGAGGCAGTGATCGTGGGCAGGAGGTGTCCATAGAAGACGGGCTGCcactggccctggagacagaaggtcagccccgggt--tcaaatccctccttaacca s panTro4.chr19 59987851 382 + 63644993 agacgaaggcagcctcccacccagacacactcccctcacggggctctggggagaaatgatgtggaaagctttgctagtaacctctacagcatggagggagttCTGGAAAAGTGATTTCAGA----AAGGTGTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATGTCCTTGGAGCTGGGCCGGGCA-TTATCAAGCTAAATCTTAGCTTTTGTCAGAA-TGGGGGG-----GTCATTGAGGGAAATTTCCAAAGGAAGGCGGAACGGGATGGGTGG----GGGGG---TAAGGGCATGAGCAGAGGCAGTGATCGTGGACAGGAGGTGTCCACAGAAGACGGGCTGCcactggccctggagacagaaggtcagccccgggt--tcaaatccctccttaacca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56943607 376 + 60714840 agacgaagacagcctcccacccagacacactcacctcaaggggctctggggagaaatgatgtggaaagctttgctagtaacctctacagcatggagggagttCTCGAAAAGTGATTTCAGA----AAGGTGTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATGTACTTGGAGCTGGGCCAGGCA-TTATCGAGCTAAATCTTAGCTTTTGTCAGAATTGGGGGG-----GTCATTGAGGGAAATTTCCAAAGGAAGGGGGAACGGGA----TGG----GGGGG---TGAGGGCATGAGTAGAGGCAGTGATCACGGACAGGAGGTGTCCACATAAGACGGACTGCcactggccctggagac---aggtcagccccgggt--tcaaatccctccttaacca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103411466 382 - 106955855 agacgaagacagcctcccacccagacacactcccctcacggggctctggggagaaatgatgtgaaaagctttgctagtaacctctacagcatggagggagttCTCGAAAAGGGATTTCAGA----AAGGTTTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATGTCCTTGGAGCTGGGCCAGGCA-TTATCGAGCTAAATCTTAGCTTTTGTCAGAA-TGGGGGG----AGTCATTGAGGGAAATTTCCAAAGGAAGGGGGAACAGGATGGGTGG----GGGGG---CGAGGGCATGGGCAGAAGCAGTGATCACGGACAGGAGGTGTCCACAGAAGACGGACTGCcactggccctggagacagaagatcagccccgggt--tcaaatccctccttaa-ca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60720970 390 + 64156825 agaCTAAGACAGCCTCCCACCGAGACACACTTCCCTCACGTGGCTCTGGGGAGAAATACTGTGGAAAGCTTTGCTAGTAACCTCTACGGCATGGAGGGAGTTCTCAAAAAGCGATTTTAGA----AAGGTGTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATATCCTTGGAGCTGGGCCAGGCACTTATCGAGCTAAATC-TAACTTTTGTCAGAA-TGGCAGGGGGAAGTCATGGAGGAAAATTTCCAAAGGAAGGGGGAACGGGATGGGTGG----GGGGGTGTTGAGGGCATAGGCAGAGGCAGTGACAACGGACAGGAGGTGTCCACAGAACGGGGACTGCcactggccctggagacagaaggtcagccccgggt--tcaaatcctcccttagcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55878810 390 + 59248254 agactaagacagcctcccACCGAGACACACTTCCCTCACGTGGCTCTGGGGAGAAATACTGTGGAAAGCTTTGCTAGTAACCTCTACGGCATGGAGGGAGTTCTCAAAAAGCGATTTTAGA----AAGGTGTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATATCCTTGGAGCTGGGCCAGGCACTTATCGAGCTAAATC-TAACTTTTGTCAGAA-TGGCAGGGGGAAGTCATGGAGGAAAATTTCCAAAGGAAGGGGGAACGGGATGGGTGG----GTGGCTGTTGAGGGCATAGGCAGAGGCAGTGACAACGGACAGGAGGTGTCCACAGAACGGGGACTGCcactggccctggagacagaaggtcagccctgggt--tcaaatcctcccttagcca i macFas5.chr19 I 2541 C 0 s papAnu2.chr19 47966912 394 + 51301725 agaCTAAGACAGCCTCCCACCAAGACACACTTCCCTCACGTGGCTCTGGGGAGAAATACTGTGGAAAGCTTTGCTAGTAACCTCTACGGCATGGAGGGAGTTCTCAAAAAGCGATTTTAGA----AAGGTGTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATATCCTTGGAGCTGGGCCAGGCACTTATCGAGCTAAATC-TAATTTTTGTCAGAA-TGGCagggggaagtcatggaggaaaatttccaaaggaagggggaaggggatgggtgggggtgggggtgttgaGGGCATAGGCAGAGGCAGTGACCACGGACAGGAGGTGTCCACAGAACGGGGACTGCCACTGGCCCTGGAGACAGAAGGTCAGCCCCGGGT--TCAAATCCTCCCTTAGCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47667655 391 + 50890351 agactaagacaGCCTCCCACCGAGACACACTTCCCTCACGTGGCCCTGGGGAGAAATACTGTGGAAAGCTTTGCTAGTAACCTCTACGGCATGGAGGGAGTTCTCAAAAAGCGATTTTAGA----AAGGTGTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATATCCTTGGAGCTGGGCCAGGCACTTACCGAGCTAAATC-TAATTTTTGTCAGAA-TGGCGGGGGGAAGTCATGGAGGGAAATTTCCAAAGGAAGGGGGAACGGGATGGGTGGG---GGGGGTGTTGAGGGCATAGGCAGAGGCAGTGACCACGGACAGGAGTTGTCCACAGAACGGGGACTGCcactggccctggagacagaaggtcagccccgtgt--tcaaatcctcccttagcca i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 74429 379 + 138250 AAACGAAGGCATCCTCCCACGCAGACATACTCCCCTCA-GGAGCTCTGGGGAGAAATCCTGTGGATAGCTTTGCTAGCAAGCCCTACCGCATGGAGGGAATCCCCAAAAACGGATTTTAGAAAGGAAGGTGTTTATGCCTGGTAAGCTTATTCATTTCTGTGATGTCCTCGGAGCTGGGCCAGACACTTAACAAGCTAAATCTTAGCTATAATCAGAA-TGGGGAG------TCATAGAGGGAAATTTCCAAAGGAAGAGGGAGCGGGATGGATGG----GGGC----TGAGGGCATGAGCAGAGACA-TGACCATGGACAGGAGGTGGCCACAgaacagggactgctactggccctggagac---aggtcagccccgggt--tcaaatcctggttca-cca i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20149086 317 - 122678785 aaacagaga----ccccca-------acactcacctggctgggtttcgggaagaaatggcatgtataatgtggtcagcaaggaccagggcacaggggaagttctcgaaagaagatGCCAAG----------------CCTGAGGAGCTCGTTAACATGTGAGAAGTGCTTGGAGCTG-----------TGTGGGGCTCCATC---------ATCAGAG-----GGG-----TTTACTGGGGGGAATTTCCAGAGGAAGAGG---------------------------CAAGGGCAGGGGTAGAGGCAGGAACAACGGATGGGAGGTGTGCACAG-GGAGGGACAGACCCTGGCCCCGGAGACAGAAAGGCAGGCCTGGGGGATCAAATCCTACCCTTTCCA i canFam3.chr1 C 0 I 467 a score=298369.000000 s hg38.chr19_GL949747v2_alt 720705 100 + 729520 agtgctgaaatggacaagttgctcaacctctctggccttcagcttcctcatctgtcaagcaggaatcaaacctcgaacttcctcccgctgttagaatttc s panTro4.chr19 59988233 100 + 63644993 agtgctgaaatggaccagttgctcaacctctctggccttcagcttcctcatctgtcaagcaggaatcaaacctcgaacttcctcccgctgttagaatttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56943983 100 + 60714840 agtgctgaaatggaccagttgctcaacctctctggccttcagcttcctcatctgtggagcaggaatcaaacctcgaacttcctcccgctgttagaatttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103411848 100 - 106955855 agtgctgaaatgggccagttcctcaacctctctggccttcagctgcctcatctgtcaagcagaagtcaaacctcgaacttcctcctgctgttagaatttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60721360 100 + 64156825 agtgctgaaatggactagttgttgaacctctctagccttcggcttcctcatctgtcaagcagaaatcaaacctcgaacttcctcccgttgttagaatttc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55879200 100 + 59248254 agtgctgaaatggactagttgttgaacctctctagccttcggcttcctcatctgtcaagcagaaatcaaacctcgaacttcctcccgttgttagaatttc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47967306 100 + 51301725 AGTGCTGAAATGGACTAGTTGTTGAACCTCTCTAGCCTTCggcttcctcatctgtcaagCAGAAATCAAACCTCGAACTTCCTCCCGTTGCTAGAATTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47668046 100 + 50890351 agtgctgaaatggactagttgttgaacctctctagccttcggcttcctcatctgtcaaccagaaatcaaacctcgaacttcctcccgttgttagaatttc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 74808 100 + 138250 ggtgctgaaacggaccagtcgctcaccctccctagacttcagcttccttatctgtcaagcagaaatCCAACCTCGAACTTCCTCCCGTTGTTAGAATTTG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20149403 467 - 122678785 I a score=1194596.000000 s hg38.chr19_GL949747v2_alt 720805 390 + 729520 aagggagttttaaagacagagctttcaactctgacctgtgaacaagtgtgacatcaaatgtactgttcgttgctattattCTGTTGCTACAAGGCAGACAGTTA-GTTTCCCAGCTCCCCTGCAGTCCCCCCAG-CCCCTCCTAGATCTGTCTGCCAGCCCCGCCCCGGGGTCACTCCAGCCAGGCTGTGCCAGGTGAATGCTCAGGTATGCggaggcg-----------gaggcggaggcaggacggccctgggagggagcagg-aggaggGGCCGGCAGCCTG------GAAGGGAAAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTAAGGAGATCCGGGTCAGGAGAGAAGGGGGCCGGGGCTTGACCAAT----------------------GGGTCTGAGGGACGGGGGGA--------CTGGGGT s panTro4.chr19 59988333 384 + 63644993 aagggagttttaaagacagagctttcaactctgacctgtgaacaagtatgacatcaaatgtactgttcgttgctattattCTGTTGCTACAAGGCAGACGGTTA-GTTTCCCGGCTCCCCTGCAGTACCCCCAG-CCCCTCCTAGATCTGTCTGCCAGCCCCACCCCGGGGTCACTCCAGCCAGGCTGTGCCAGGTGAATGCTCAGGTAT------GCG-----------GAGGCGGAGGCAGGACGGCCCTGGGAGGGAGCAGG-AGGAGGGGCCGGAAGCCTG------GAAGGGAAAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTAAGGAGATccgggtccggagagaagggggccggggcttgaccaat----------------------gggtctgagggacgggggga--------ctggggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56944083 383 + 60714840 aagggagttttaaagacagagctttcaactctgacctgtgaacaagtgtgacatcaaatgtactgttcgttgttattaGTCTGTTGCTACAAGGCAGATGGTTA-GTTTCCCGGCTCCCCTGCAGTCCCCCCAG-CCCCTCCTAGATCTGTCTGCCAGCCCCGCCCCGGGGTCACTCCAGCCAGGCTGTGCCAGGTGAATGCTCAGGTAT------GCG-----------GAGGCGGAGGCAGGACGGCCCTGGGAGGGAGCAGG-AGGAGGGGCCGGCAGCCTG------GAAGGGAAAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTAAGGAGATccgggtccggagagaa-ggggccggggcttgaccaat----------------------gggtctgagggacgagggga--------ctggggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103411948 379 - 106955855 aagggagttttaaagacagagctttcaactctgacccgtgaacaagcgtgacatcaaatgtactgttcgttgttattattCTGTTGCTACAAGGCA----GTTA-GTTTCCCGGCTCCCCTGCAGTCCCCCCAG-CCCCTCCTAGATATGTCTGCCAGCCCCGCCCTGGGGTCACTCCAGCCAGGCTGTGCCAGGTGAATGCTCAGGTAT------gcg-----------gaggcggaggcaggacggccctggcagggagcagg-aggaggGGCCAGCAGCCTG------GAAGGG-AAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTAAGGAGATccgggtctggagagaagggggccggggcttgaccaac----------------------gggtgtgcgggaggaggggc--------tgcgggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60721460 372 + 64156825 aagggagttTTAAAGACAGAGCTTTCAACTCTGACCTGTGAACAAGTGTGACATCAAATTTACTGT---TTGCTATTAGTCTGTTGTTACGAGGCAGAG----A-GTTTCCCGGCTCCCCTGCAGT-----CAG-CCCCTCCTGGATCTGTCTGCCAGCCCCGCCCCTGGGTCACTCCAGCCAGGCTGTGCCAGGTGAACGCTCAGGTAT------GCG-----------GAGGCGGAGGCAGGACAGCCCTGGGAGGGAGCAGG-AGGAGGGGCCGGCAGCCTG------GAACGGAAAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTGAGGAGATccgggttcagagagaaggaggccgggatttgaccaat----------------------gggtctgagggagaagggga--------ctggggt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55879300 376 + 59248254 aagggagttttaaagacagagctttcaactctgacctgtgaacaagtgtgacatcaaatttactgt---ttgttattaGTCTGTTGTTACGAGGCAGAGAGTTA-GTTTCCCGGCTCCCCTGCAGT-----CAG-CCCCTCCTGGATCTGTCTGCCAGCCCCGCCCCTGGGTCACTCCAGCCAGGCTGTGCCAGGTGAACGTTCAGGTAT------GCG-----------GAGGCGGAGGCAGGACAGCCCTGGGAGGGAGCAGG-AGGAGGGGCCGGCAGCCTG------GAACGGAAAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTGAGGAGATCCGGGTTCagagagaaggaggccgggatttgaccaat----------------------gggtctgagggagaagggga--------ctggggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47967406 376 + 51301725 AAGGGAGTTTTAAAGACAGAGCTTTCAACTCTGACCTGTGAACAAGTGTGACATCAAATTTACTGT---TTGTTATTATTCTGTTGTTACAAGGCAGAGAGTTA-GTTTCCCGGCTCCCCTGCAGT-----CAG-CCCCTCCTGGATCTGTCTGCCAGCCCCGCCCCTGGGTCACTCCAGCCAGGCTGTGCCAGGTGAACGCTCAGGTAT------GCG-----------GAGGCGGAGGCAGGACGGCCCTgggagggagcagg-aggaggggccGGCAGCCTG------GAACGGAAAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTGAGGAGATCCGGGTTCAGAGAGAAGGAGGCCGGGATTTGACCAAT----------------------GGGTCTGAGGGAGAAGGGGa--------ctggggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47668146 379 + 50890351 aagggagttttaaagacagagctttcaactctgacctgtgaacaagtgtgacatcaaatttactgtttgttgttattattCTGTTGTTACAAGGCAGAGAGTTA-GTTTCCCGGCTCCCCTGCAGT-----CAG-CCCCTCCTGGATCTGTCTGCCAGCCCCGCCCCTGGGTCACTCCAGCCAGGCTGTGCCAGGTGAACGCTCAGGTAT------GCG-----------GAGGCGGAGGCAGGATGGCCCTGGGAGGGAGCAGG-AGGAGGGGCCGGCAGCCTG------GAACAGAAAGGACAGTGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTGAGGAGATCCGGGTTCagagagaaggaggccgggatttgaccaat----------------------gggtctgagggaggagggga--------ctggggt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 74908 414 + 138250 CAGGAAGTTTT-AAGACAGAGCTTTCAACTCTGACCTGTGAACAAGCCTGACATCAAAT-TACAATTTGTTGTTGTTATTCTGCTGTTACAAGGCAGACAGTTAGGTTTCCTGGATCCCCTGCGGTCCTCCCAGCCCCCTCCTAGATCTGTCTGCCAGCCCCGCCC-AAGGCCACTCCAGCCAGGCGGTGCCAGGTGAATGCTCAGGTAT------GCGGAGGCGGAGGCGAGGCGGAGGCAGGATGGCCCTGGGAGGGAGCAGG-AGGAGGGGCCGGCAGCCTG------GAAGGAAAAGGACAGCAGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCCGGTGAGGAGATCCAGGTCAGGAGAGAA-GGGCCGGgggtctgaggaaggaggggttgaccctggacaccagggtctgagagaagagggg---------ctggggt i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20149870 394 - 122678785 AAGAGGGTATCTGAGGCAGAGCTGTCGGCGCTGA-----GAACAAGTGTGACATCAGAT-TACTTGTCCTTGAGCTGA---TGTTGTTATGACAGAGACAGTCACAGTTTGTGGCTCCCCCG---------CAC-CCCAGCCCGGATGTCTGTGCCAGCCCCGCCC-AGGGCCACCGCTGCTGGGCTGTGCCAGGTGAGTGCTCAGGTAT------GCG-----------GAGGCAGAGGCGGGGTGGCCT--GGAGGGAGCAGGAAGGAGGGGCCGGCATTCCGCATTCTGGACTCAGGGGACAGCAGAGAGCTGGGCCTCTCCGTGCCACCGCCACCAGACAGAGCCTGACGGTGGCAGGTGAGGAA----GGGGCTAGCCAGGAGGGGCTGGAGGTCCG----------------------------GAGTCCCAAGGAGCAGGCGGCCAGGACTCTGGGGT i canFam3.chr1 I 467 C 0 a score=91807.000000 s hg38.chr19_GL949747v2_alt 721195 46 + 729520 CTGGACTccaggg--------------------------tctcagggaggacgggctgggggtctgaactcc------------ s panTro4.chr19 59988717 46 + 63644993 ctggactccaggg--------------------------tctcagggaggaggggctgggggtctggactcc------------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56944466 46 + 60714840 ctggactccaggg--------------------------tctcagggaggaggggctgggggtctggactcc------------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103412327 46 - 106955855 ctggactcctggg--------------------------tctgagggaggaggggctgcgggcttggactCC------------ i nomLeu3.chr10 C 0 M 627 s rheMac3.chr19 60721832 46 + 64156825 ctggactcctggg--------------------------tctgagggaggaggggctgggggcctggactcg------------ i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55879676 45 + 59248254 ctggactcctggg--------------------------tctgagggaggagggact-ggggtctggactcc------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47967782 45 + 51301725 ctggactcctggg--------------------------tctgagggaggagggact-ggcgtctggactcc------------ i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 75322 45 + 138250 ctggacacctggg--------------------------tctcatggaggaggggct-ggggtctggactct------------ i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150264 84 - 122678785 CCAGACACCAGGAAGGCTGGCAGACATAAACCCTTGAGTCCTGAAGAGGTAAGGGCTGGGAGATTGGCCCCATACTGAGGTCAC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47668525 0 + 50890351 C a score=35117.000000 s hg38.chr19_GL949747v2_alt 721241 24 + 729520 cgggtctgaggga------------------ggagggcctgg- s panTro4.chr19 59988763 24 + 63644993 tgggtctgaggga------------------ggagggcctgg- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56944512 24 + 60714840 tgggtctgaggga------------------ggaggggctgg- i ponAbe2.chr19 C 0 M 415 s rheMac3.chr19 60721878 24 + 64156825 tgggtctgaggga------------------ggagggattgg- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55879721 22 + 59248254 tgggtctgaggga------------------ggaggggct--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47967827 24 + 51301725 tgggtctgaggga------------------ggaggggctgg- i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 75367 22 + 138250 tgggtctgaggga------------------gaagggtct--- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150348 43 - 122678785 AGTGTCTGAGGAATTGGATGAATGACTCTCTGAGGGGACTTGG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103412373 627 - 106955855 M e chlSab2.chr6 47668525 0 + 50890351 C a score=39442.000000 s hg38.chr19_GL949747v2_alt 721265 41 + 729520 ----------------------ggtcctggactcctaggtctgagggagga-ggggctgagggc- s panTro4.chr19 59988787 41 + 63644993 ----------------------ggtcctggactcctaggtctgagggagga-ggggctgagggc- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60721902 40 + 64156825 ----------------------gggcctggactcccgggtct-agggagga-gggattgggggc- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55879743 40 + 59248254 ----------------------gggcctggactcctgggtctgagggagga-gggact-ggggt- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47967851 41 + 51301725 ----------------------gggtctggactcctgggtctgaaggaggaggggact-ggggt- i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 75389 41 + 138250 ----------------------agccctggacccctaagtctgaaggagga-gggattgggggc- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150391 64 - 122678785 AGTCTTTGGGTCCAGAAGCTCTGAGCCTGAATTCCTGGGCCCTAGAGGAGATGAGGCT-GGGACA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e nomLeu3.chr10 103412373 627 - 106955855 M e chlSab2.chr6 47668525 0 + 50890351 C a score=103139.000000 s hg38.chr19_GL949747v2_alt 721306 65 + 729520 ctggactcctgg-------------------------------------gtc--------------------------------------------tgagggaggaggagat-ggggcctggactcct-gggtctgagggaggagtgg s panTro4.chr19 59988828 64 + 63644993 ctggattcctgg-------------------------------------gtc--------------------------------------------tgagggaggggctg---ggggcctggacccccagggtccaagggaggagggg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60721942 66 + 64156825 ctggactcctgg-------------------------------------atc--------------------------------------------tgagggaggagggattgggggcctggactcct-gggtctgagggaggaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55879783 66 + 59248254 ctggactcctgg-------------------------------------gtc--------------------------------------------tgaaggaggaggggactggggtctggactcct-gggtctgagggaggagggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47967892 66 + 51301725 ctggactcctgg-------------------------------------gtc--------------------------------------------tgagggaggaggggctgggggcctggactcct-gggtctgagggaggagggg i papAnu2.chr19 C 0 M 829 s chlSab2.chr6 47668525 63 + 50890351 ctggactcctgg-------------------------------------gtc--------------------------------------------tgagggaggaggggct--gggcctggactcct-gggtct-agggaggagggg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 75430 66 + 138250 ctgaactcctgg-------------------------------------gtc--------------------------------------------tgagggaggaggggctggtgacctggactcct-gggtctgagggaggagggg i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150455 146 - 122678785 CAGGATCACTGGAGAGAGGAAGCAAAGTGGGGTACACATAGATTAGGGAGTCAAATGCATTGATCCCTGAGAGATTTGGGGGGGCAGCATACTAGGTGAGGGAAGAGGGGCTGGGGGGCCAGACTCCT-GGGTCTGAGGGAGGAGGG- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e nomLeu3.chr10 103412373 627 - 106955855 M a score=80701.000000 s hg38.chr19_GL949747v2_alt 721371 61 + 729520 actggggtctggactcctgggtctgagggaggaggggactggggtctggactcc--tgggtct s panTro4.chr19 59988892 61 + 63644993 ctgggggcctggtctcctgagtctaagggaggaaggattgggggcctggactcc--tgggtct i panTro4.chr19 C 0 I 1 s rheMac3.chr19 60722008 60 + 64156825 ctggggaccagggctcctgggtctgagggaggaaggg-ctggggcctggactcc--agggtct i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55879849 61 + 59248254 ctgggggcctggactcgtgggtctgaaggaggaggggactggggtctggactcc--tgggtct i macFas5.chr19 C 0 I 292 s chlSab2.chr6 47668588 63 + 50890351 ctgggggtctggactcctgggtctgagggtggagggactgggggtctggacgtccgtgggtcg i chlSab2.chr6 C 0 I 1 s calJac3.chr22_GL285922_random 75496 60 + 138250 ctggaggcctggactcctgagtctgagggaggagggg-ctggggtctggactcc--tgggtct i calJac3.chr22_GL285922_random C 0 I 1 s canFam3.chr1 20150601 61 - 122678785 GCTGGGGTCTGGACTCCTAGGTCTGAGGGAGGAGGGGCTAGGGGCCTGGACTCC--ACAGTCT i canFam3.chr1 C 0 I 1 e ponAbe2.chr19 56944536 415 + 60714840 M e nomLeu3.chr10 103412373 627 - 106955855 M e papAnu2.chr19 47967958 829 + 51301725 M a score=26624.000000 s hg38.chr19_GL949747v2_alt 721432 22 + 729520 aggg-------aagagggact--ggggcctg s panTro4.chr19 59988954 22 + 63644993 aggg-------aggaggggct--ggggCCTG i panTro4.chr19 I 1 M 797 s rheMac3.chr19 60722069 22 + 64156825 aggg-------aggagggact--ggggcctg i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55880202 23 + 59248254 aggg-------aggaggggct-gggggcctg i macFas5.chr19 I 292 C 0 s chlSab2.chr6 47668652 30 + 50890351 agggnnnnnnnnnnaggggct-gggggcctg i chlSab2.chr6 I 1 C 0 s calJac3.chr22_GL285922_random 75557 24 + 138250 aggg-------aggaggggtatgggggcctg i calJac3.chr22_GL285922_random I 1 C 0 s canFam3.chr1 20150663 23 - 122678785 AGGG-------AGAAGGGGCT-GGGGGTCTG i canFam3.chr1 I 1 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e nomLeu3.chr10 103412373 627 - 106955855 M e papAnu2.chr19 47967958 829 + 51301725 M a score=29552.000000 s hg38.chr19_GL949747v2_alt 721454 25 + 729520 gacttctgggtctgagggaggaggg s rheMac3.chr19 60722091 25 + 64156825 gacttctgggtctgagggagggggg i rheMac3.chr19 C 0 M 560 s macFas5.chr19 55880225 25 + 59248254 gactcctgggtctgagggaggaggg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47668682 25 + 50890351 gactcctgggtctgagggaggaggg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 75581 25 + 138250 aactcctgggtctgagggaggaggg i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150686 24 - 122678785 GACTACT-GGTCAGAGGGAGGAGGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e nomLeu3.chr10 103412373 627 - 106955855 M e papAnu2.chr19 47967958 829 + 51301725 M e panTro4.chr19 59988976 797 + 63644993 M a score=1500.000000 s hg38.chr19_GL949747v2_alt 721479 1 + 729520 g s nomLeu3.chr10 103413000 1 - 106955855 g i nomLeu3.chr10 M 627 C 0 s macFas5.chr19 55880250 1 + 59248254 g i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47668707 1 + 50890351 g i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 75606 1 + 138250 g i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150710 1 - 122678785 G i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e papAnu2.chr19 47967958 829 + 51301725 M e rheMac3.chr19 60722116 560 + 64156825 M e panTro4.chr19 59988976 797 + 63644993 M a score=2100.000000 s hg38.chr19_GL949747v2_alt 721480 1 + 729520 c s nomLeu3.chr10 103413001 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60722676 1 + 64156825 c i rheMac3.chr19 M 560 C 0 s macFas5.chr19 55880251 1 + 59248254 c i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47668708 1 + 50890351 c i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 75607 1 + 138250 c i calJac3.chr22_GL285922_random C 0 I 287 s canFam3.chr1 20150711 1 - 122678785 C i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e papAnu2.chr19 47967958 829 + 51301725 M e panTro4.chr19 59988976 797 + 63644993 M a score=306149.000000 s hg38.chr19_GL949747v2_alt 721481 218 + 729520 tgggggcctggactcctgggcctgagggagg-aggggctggggcctggatgcctgcattgagggaggag--gctggggTAGGAATTAGAGGCTCCT----ACTGGCCAGGCCTTCACATGTTTGCTGGCTCCCAGGGCACCTCCAGGTGGGCAGGAGCT--ACCA--CTCAGCACCATGAGCACCGCCACAGGGTAAGCGCCCCCGGACCCCAGGTCCCA-GCCCCAGCA- s nomLeu3.chr10 103413002 217 - 106955855 tgggggcctgaactccaggatctgagggagg-aggggctggggcctggctgcctgcattgagggaggag--gctggggTAGGAGTTAGAGGCTCCT----ACTGGCCAGGCCCTCACATCTTTGCTGGCTCCCAGGGCACCTCCAGGTGGGCAGGAGCT--TCCA--CTCAGCACCATGAGCACCGCCACAGGGTAAGTGCCCC-GGACCCCGGGTCCCA-GCCCCAGCG- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60722677 218 + 64156825 tgggggtctggactcctgggtctgagggagg-agggactggggcttggatgcctgtgttgagggaggag--gctggggTAGGAATTAGAGGCTCCT----ACTGGCCAGGCCCTCACATCTTTGCTGGCTCCCAGGGCACCTCCAGGTGGGCAGGAGCT--CCCA--CTCAGCACCATGAGCACCGCCACGGGGCAGGTCCCCCTGGCccccaggcccca-gccccagcc- i rheMac3.chr19 C 0 I 18 s macFas5.chr19 55880252 219 + 59248254 tgggggcctggactcctgggtctgagggagg-aggggccggggcttggatgcctgtgttgagggaggag--gctggggTAGGAATTAGAGGCTCCT----ACTGGCCAGGCCCTCACATCTTTGCTGGCTCCCAGGGCACCTCCAGGTGGGCAGGAGCT--CCCA--CTCAGCACCATGAGCACCGCCACCGGGTAAGTGCCCCTGGCccccaggccccaggccccagcc- i macFas5.chr19 C 0 I 19 s chlSab2.chr6 47668709 216 + 50890351 t--gggcctggactcctgggtct-agggagg-aggggctggggcctgaatgcctgtgttgagggaggag--gctggagTAGGAATTAGAGGCTCCT----ACTGGCCAGGCCCTCACATCTTTGCTGGCTCCCAGGGCACCTCCAGGTGGGCAGGAGCT--CCCA--CTCAGCACCATGAGCACCGCCACTGGGTAAGTGCCCCCGGCccccaggccccaggccccagcc- i chlSab2.chr6 C 0 I 19 s calJac3.chr22_GL285922_random 75895 211 + 138250 tggtgacctggactcctggatct-agggagg-aggagctgggacctggacACCTGC-TTGAGGGAGGAG--GCTAGGGTAGGAATCAGAGGCTCCC----ACTGTCTGGGCCCTCACATCTTTGCTGCCTCCCAGGGCACCTCCAGGTGGGAAAAGGCTTCCCCT--CTCAGCACCATGAGCACCACCACCGGGTAAGTGCccctggccccca--------gccccagcc- i calJac3.chr22_GL285922_random I 287 C 0 s canFam3.chr1 20150712 223 - 122678785 TGGGGGCCTGGATTCCTAGGTCTGAGGGAGGAAAGGGCTGGGGTCTGGACTCCTGGTCAGAGGGAGGAGGAGCAGGGGCCAAAATCACAGATACCTCAGGCCAGGTCAGTCCCTCACCTCTTTGATGGTTTCCAGGGCACCTCCAGGT-GGCAGGAGCT--CCCATTCTCCACACCATGAGCACTAGCACCGGGTAAGTGTCCCTTGTCCCC---TCCC--CCCCCAGGCT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e papAnu2.chr19 47967958 829 + 51301725 M e panTro4.chr19 59988976 797 + 63644993 M a score=39489.000000 s hg38.chr19_GL949747v2_alt 721699 24 + 729520 CGCCTCCCG------------------------CCTCCCCTCGCCTCC s ponAbe2.chr19 56944968 24 + 60714840 CGCCTCCCG------------------------CCTCCCCTCGCCTCC i ponAbe2.chr19 M 415 C 0 s nomLeu3.chr10 103413219 24 - 106955855 CGCCTCCCG------------------------CCTGCCCTCGCCTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60722913 24 + 64156825 CGCCTCCCG------------------------CCTCCGCTCGCCTCC i rheMac3.chr19 I 18 C 0 s macFas5.chr19 55880490 24 + 59248254 CGCCTCCCG------------------------CCTCCCCTCGCCTCC i macFas5.chr19 I 19 C 0 s chlSab2.chr6 47668944 24 + 50890351 CGCCTCCCG------------------------CCTCCCCTCGCCTCC i chlSab2.chr6 I 19 C 0 s calJac3.chr22_GL285922_random 76106 48 + 138250 cgcctcccatctgcgtctgcccctgcccctgcccctgcccctgcctcc i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150935 24 - 122678785 GCCCTGTCA------------------------CCTCTGCCAGCCTCG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47967958 829 + 51301725 M e panTro4.chr19 59988976 797 + 63644993 M a score=25424.000000 s hg38.chr19_GL949747v2_alt 721723 9 + 729520 TCACCCACA s ponAbe2.chr19 56944992 9 + 60714840 TCACCCACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103413243 9 - 106955855 TCACCCACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60722937 9 + 64156825 TCACCCACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55880514 9 + 59248254 TCACCCACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47968787 9 + 51301725 TCACCCACA i papAnu2.chr19 M 829 C 0 s chlSab2.chr6 47668968 9 + 50890351 TCACCCACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 76154 9 + 138250 tcacccaca i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150959 8 - 122678785 -TCCCTGCA i canFam3.chr1 C 0 C 0 e panTro4.chr19 59988976 797 + 63644993 M a score=14324.000000 s hg38.chr19_GL949747v2_alt 721732 5 + 729520 CCCGC s panTro4.chr19 59989781 5 + 63644993 CCCGC i panTro4.chr19 M 797 C 0 s ponAbe2.chr19 56945001 5 + 60714840 CCCGC i ponAbe2.chr19 C 0 I 5 s nomLeu3.chr10 103413252 5 - 106955855 CCCGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60722946 5 + 64156825 CCCGC i rheMac3.chr19 C 0 I 5 s macFas5.chr19 55880523 5 + 59248254 CCCGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47968796 5 + 51301725 CCCGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47668977 5 + 50890351 CCCGC i chlSab2.chr6 C 0 I 5 s calJac3.chr22_GL285922_random 76163 4 + 138250 cctg- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150967 5 - 122678785 CCCAC i canFam3.chr1 C 0 C 0 a score=-872.000000 s hg38.chr19_GL949747v2_alt 721737 15 + 729520 TTGCGGCAGCCCAGA s panTro4.chr19 59989786 15 + 63644993 TTGCGGCAGCCCAGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103413257 3 - 106955855 ------------AGA i nomLeu3.chr10 C 0 I 2 s macFas5.chr19 55880528 3 + 59248254 ------------AGA i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47968801 3 + 51301725 ------------AGA i papAnu2.chr19 C 0 I 2 s calJac3.chr22_GL285922_random 76167 4 + 138250 -----------cAGA i calJac3.chr22_GL285922_random C 0 I 2 s canFam3.chr1 20150972 8 - 122678785 -------AACTGACA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56945006 5 + 60714840 I e chlSab2.chr6 47668982 5 + 50890351 I e rheMac3.chr19 60722951 5 + 64156825 I a score=717039.000000 s hg38.chr19_GL949747v2_alt 721752 228 + 729520 CTGTTTGCGGCGGCCCAGACTCTGGCCCAAGCCCCGACACTCAGGAGGAAGCCAGAGCCTCTCTCCTCCCTGCCCagcctggggttaggggcccccactgcagagc-agacaggcctgagctccagttc-ggccctcacactcagtgctgat-gtaaccctgg---tcagaggacatcacctcctggagcctcagcccctcctctgtgacacagggacaatgttgaaaaattgg------------- s panTro4.chr19 59989801 228 + 63644993 CTGTTTGCGGCGGCCCAGACTCTGGCCCAAGCCCGGACACTCAGGAGGAAGCCAGAGCCTCTCTCCTCCCTGCCCagcctggggttaggggcccccactgcagagc-agacaggcctgagctccagttt-ggccctcacactcagtgctgat-gtaaccctgg---tcagaggacatcacctcctggagcctcagcccctcctctgtgacacagggacaacgttgaaaaattag------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56945011 228 + 60714840 CTGTTTGCGCCAGCCCAGACTCTGGCCCAAGCCCCGACACTCAGGAGGAAGCCAGAGCCGCTCCCCTCCCTACCCagcctggggttaggggcccccactgcagagc-agacaggcctgagctccagttc-ggccctcacactcagtgctgat-gtaacccttg---tcagaggatatcacctcttggagcctcagcccctcctctgtgacacagggacaacgttgaaaaattgg------------- i ponAbe2.chr19 I 5 C 0 s nomLeu3.chr10 103413262 227 - 106955855 CTGTTTGCGGCAGCCCAGACTCTGGCCCAAGCCCGGACGCTCAGGAGGAAGCCAGAGCTGCGCTCCTCCCTGCCCagcctggggttaggggcccccactgcagagc-agacaggcctgagctccagttc-ggccctcacactcagtgccaat-gtaaccctgg---tcagcggacgtcacctcttggagcctcag-ccctcctctgtgacacagggacaatgtcgaaaaactgg------------- i nomLeu3.chr10 I 2 C 0 s rheMac3.chr19 60722956 228 + 64156825 CTGTTTCTGGCAGCCCAGACTCTGGCCCAAGCCCGGACACTCAGGAGGAAGCCAGAGCCGCTCTCCTCCCTGCCCagcctggggttaggggcccccactgtagagc-agacaggcctgtgctccagctc-ggccctcacactccatgctgat-gtaaccccgg---tcaaaggacatcacctcttggagcctcagcccctcctctgtgacacagggacaattttgaaacattgg------------- i rheMac3.chr19 I 5 C 0 s macFas5.chr19 55880533 228 + 59248254 CTGTTTCTGGCAGCCCAGACTCTGGCCCAAGCCCGGACACTCAGGAGGAAGCCAGAGCCACTCTCCTCCCTGCCCagcctggggttaggggcccccactgtagagc-agacaggcctgtgctccagctc-ggccctcacactccatgctgat-gtaaccccgg---tcaaaggacatcacctcttggagcctcagcccctcctctgtgacacagggacaattttgaaacattgg------------- i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47968806 228 + 51301725 CTGTTTCTGGCAGCCCAGACTCTGGCCCAAGCCCGGACACTCAGGAGGAAGCCAGAGCCACTCTCCTCCCTGCCCAGCCTGGGGTTAGGGGCCCCCACTGTAGAGC-AGACAGGCCTGAGCTCCAGCTC-GGCCCTCACACTCCGTGCTGAT-GTAACCCCGG---TCAAAGGACATCACCTCTTGGAGCCTCAGCCCCTCCTCTGTGACACAGGGACAATTTTGAAACATTGG------------- i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47668987 228 + 50890351 CTGTTTCTGGCAGCCCAGACTCTGGCCCAAGCCCGGACACTCAGGAAGAAGCCAGAGCCACTCTCCTCCCTGCCCagcctggggttaggggcccccactgtagagc-agacaggcctgagctccagctg-ggccctcacactccgtgctgat-gtaaccctgg---tcaaaggacatcacctcttggagcctcagcccctcctctgtgacacagggacaattttgaaacattgg------------- i chlSab2.chr6 I 5 C 0 s calJac3.chr22_GL285922_random 76173 227 + 138250 CTGTTTCCTGCAGTGCAGACTATGG-----GCCTGGACACTCAGGAGGAAGCCAGAGCCGCTCTCCTCCCTGCCCAGCCTGTGGTCaggagcacccgctgtagagc-agacaggcctgagctccagctg-ggcactcatactcagggctgatcttaaccctagtcatcaaaggacatcacctcttggagcctcagcccctcctctgtgaaacagggacaatTTTGAAAAACTGG------------- i calJac3.chr22_GL285922_random I 2 I 1229 s canFam3.chr1 20150980 211 - 122678785 ---TTTACAGCAGCCCAG------------GTCTGGACACTGAGAAGGAAGCCTGAGCTGCTC-CTTCCCTG-CCGGTCTATGCT--GGAGCTACTGctccagtgcaagaca--cctgggtccaaacccagacactaacactcaggg-tggt-gtgactctaa---cca------acaacct----gagcctgagcccctcctctgtgaaagagggacaataaaaaaaaaataaaaaaaaaaaaaaG i canFam3.chr1 C 0 C 0 a score=331082.000000 s hg38.chr19_GL949747v2_alt 721980 126 + 729520 agggatagt------gcattacaggacttagc----------tgaccacctcactgacagcaggtgctcaactcataggagtcgctattGCGATTGTTATGTTGTTAGTAAATATTAACCCTTTGCTAGAAAATCAGGGCTG s panTro4.chr19 59990029 126 + 63644993 agggatagt------gcattacaggacgtagc----------cgaccacctcactgacagcaggtgctcaactcataggagccgctattGCGATCGTTATGTTGTTAGTAAATATTAACCCTTTGCTAGAAAATCAGGGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56945239 126 + 60714840 agggatagt------gcattacaggacttagc----------cgcccacctcactgacagcaggtgctcaactcataggagccgctattgtGATTGTTATGTTGTTAGTAAATATTAACCCTTTGCTAGAAAATCAGGGCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103413489 125 - 106955855 agggatagt------gcattacaggacttagc-----------gaccacctcactgacagcaggtgctcaactcataggagccgctattGCGATTGTTATGTTGTTAGTAAATATTAACCCTTTGCTAGAAAATCAGGGCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60723184 126 + 64156825 tgggatagt------gcattacaggacttagc----------cggccacctcactgacagccggtgctcagctcataggagcctctgttGGGATTGTTATCTTGTTAGTAAATAGTAACCCTTTGCTAGAAAATCAGGACTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55880761 126 + 59248254 tgggatagt------gcattacaggacttagc----------cggccacctcactgacagccggtgctcagctcataggagcctctgttGGGATTGTTATCTTGTTAGTAAATAGTAACCCTTTGCTAGAAAATCAGGACTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969034 126 + 51301725 TGGGATAGT------GCATTACAGGACTTAGC----------CGGCCACCTCACTGACAGCCGGTGCTCAGCTCATAGGAGCCTCTGTTGGGATTGTTATCTTGTTAGTAAATAGTAACCCTTTGCTAGAAAATCAGGACTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47669215 126 + 50890351 tgggatagt------gcattacaggacttagc----------cgaccacctcactgacagccggtgctcagctcataggagcctctgttGGGATTGTTATCTTGTTAGTAAATAGTAACCCTTTGCTAGAAAATCAGGACTG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20151191 140 - 122678785 AGGGACAATATGAGAGCCTGACAGG--TTAATGAAGGTACAAGGCTTATCTGACTCACAGCAGGTACTCCACTCACAGGAACTGCCACTGCGGCTGTTAGCGTGTTATTAAATATTGACTCTTTGCAGGCAAATCTGGGCTG i canFam3.chr1 C 0 I 208 e calJac3.chr22_GL285922_random 76400 1229 + 138250 I a score=273950.000000 s hg38.chr19_GL949747v2_alt 722106 101 + 729520 TTTATAATGAAGACTCAAGTCCCCCAGAGTAAGCAGGGAGAAAAACAATGAGAGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGCTCTCTGGCCCAGA s panTro4.chr19 59990155 101 + 63644993 TTTATAATGAAGACTCAAGTCCCCCAGAGTAAGCAGGGAGAAAAACAATGAGAGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGCTCTCTGGCCCAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56945365 101 + 60714840 TTTATAATGAAGACTCAAGTCCCCCAGAGTAAGCAGGGAGAAAaacaatgagagatgagtcaaaatacctgcatggtaggtagtgagctctctggcccaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103413614 101 - 106955855 TTTATAATGAAGACTCGAGTCCCCCAGAGTAAGCAGGGAGAAAAACAATGAGAGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGCTCTCTGGCCCAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60723310 101 + 64156825 TTCATAATGAAGACTCAAGTCTCCTAGAGTAAGCAGGGAGAAAAACAATGAGCGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGTTCTCTGGCCCAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55880887 101 + 59248254 TTCATAATGAAGACTCAAGTCTCCTAGAGTAAGCAGGGAGAAAAACAATGAGCGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGTTCTCTGGCCCAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969160 101 + 51301725 TTCATAATGAAGACTCAAGTCCCCCAGAGTAAGCAGGGAGAAAAACAATGAGCGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGTTCGCTGGCCCAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47669341 101 + 50890351 TTCATAATGAAGACTCCAGTCCCCCAGAGTAAGGAGGGAGAAAAACAATGAGCGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGTTCTCTGGCCCAGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20151539 92 - 122678785 TTTCTAATAAAG-TTCAAGTCTCCTGGGGTGAGCAAGGAGAAGCCCAAACAGAGGCCCCTGTGAATAGCTGCAT--------GTAAGTTCCCCAGCACAGC i canFam3.chr1 I 208 C 0 e calJac3.chr22_GL285922_random 76400 1229 + 138250 I a score=208081.000000 s hg38.chr19_GL949747v2_alt 722207 59 + 729520 GGTAATCAAATTGTGGTGACATCAGACTGGCAGGAGCAGGATGAGGAACAGGAGTTTGG s panTro4.chr19 59990256 59 + 63644993 GGTAATCAAATTGTGGTGACATCAGACTGGCAGGAGCGGGATGAGGAACAGGAGTTTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56945466 59 + 60714840 ggtaatcaaATTGTGGTGACATCAGACTGGCAGGAGTGGGATGAGGAACAGGAGTTTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103413715 59 - 106955855 GGTAATCAAATTGTGATGACATCAGACTGGCAGGAGCGGGATGAGGAACAGGAGTTTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60723411 57 + 64156825 GGTAATCAAAT--TGGTGACATCAGACTGGCAGGAGCGGGATGAGGAACAGGAGTTTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55880988 57 + 59248254 GGTAATCAAAT--TGGTGACATCAGACTGGCAGGAGCGGGATGAGGAACAGGAGTTTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969261 57 + 51301725 GGTAATCAAAT--TGGTGACATCAGACTGGCAGGAGCGGGATGAGGAACAGGAGTTTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47669442 59 + 50890351 GGTAATCAAATTGTGGTGACATCAGACTGGCAGGAGCGGGATGAGGAATAGGAGTTTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 77629 58 + 138250 GGTAATCAAATTGTGGTGACATCAGACTGGCAGGAGCAGGATGAGGAA-AAGACTTTGG i calJac3.chr22_GL285922_random I 1229 I 474 s canFam3.chr1 20151631 59 - 122678785 AGTAATCAAACTGTGTGGAGATCTGACTGGCAGGAGAAGGATGAGGAGCAGAGATTTGA i canFam3.chr1 C 0 C 0 a score=1545048.000000 s hg38.chr19_GL949747v2_alt 722266 507 + 729520 GAAAAAGGGTTTTTCAGTTC----CCCTGACGCCA-CCTGATCGCTGAGCTTCTGTTATGTGCATGCAAGT-GGGGATTCAAGAAT--TCTTAGGAAAGGTAATCTTAGGAAGAAATTGAGGACGGG---AGGAGACAGAGAAGGATGTGGTTGGGAAGCACCTGGCCCATGGGAGTGGGAGGGGAAGCAGATAATTCCCTGTCTACTTCAGATACCACTAATGCTATTATAACCATTCccatttattgagcaacttctgtgtgctaagccctggcagcatcttaAGAATGATAataacagttattgaggcttcaaaatacttcacctgcatcatctgactgaatttgcccaacagccctaccagatgg--------------tta----ctacgttacagaaagaaaaactgaggcaggagagattaaatcctcttctgaaggtcttatggcaaggaggcagtagacagagggtttgaatc-------------ccggactATGCCATGGTAGAGATCACACT-CCCCTACCACCCAGCACCACCGCCT s panTro4.chr19 59990315 507 + 63644993 GAAAAAGGGTTTTTCAGTTC----CCCTGACGCCA-CCTGATCGCTGAGCTTCTGTTATGTGCGTGCAAGT-GGGGATTCAAGAAT--TCTTAGGAAAGGTAACCTTAGGAAGAAATTGAGGACGGG---AGGAGACAGAGAAGGATGTGGTTGGGAAGCGCCTGGCCCATGGGAGTGGGAGGGGAAGCAGATAATTCCCTGTCTACTTCAGATACCACTAATGCTATTGTAACCATTCccatttattgagcaacttctgtgtgctaagccctggcagcatcttaAGaatgataataacagttattgaggcttcagaatacttcacctgcatcatctgactgaatttgcccaacagccctaccagatgg--------------tta----ctatgttacagaaacaaaaactgaggcaggagagattaaatccccttctgaaggtcttatggcaaggaggcagtagacagagggtttgaatc-------------ccggactATGCCATGGTAGAGATCACAGT-CCCCTACCACCCAGCACCACCGCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56945525 506 + 60714840 G-AAAAGGCTTTTTCAGTTC----CCCTGACGCCA-CCTGATCGCTGAGCTTCTGTTATGTGCCGGCAAGTGGGGGATTCAAGAAT--TCTTAGGAAAGGTAACCTTAGGAAGAAATTGAGGACAGG---AGGAGACAGAGAAGGATGTGGCTGGGAAGCGCCTGGCCCATGTGAGTAGGAGGGGACGCAGATAATTCCCTGTCTACTTCAGATACCACTAATGCTATTGTAACCATTCccatttattgagcaacttctgtgtgctaagccctggcagcatcttaAGAATGATAataacagttatcgaggcttcaaaatacttcacctgcatcatctgattgaatttgcccaacagccctacgagatgg--------------tta----ctatgttacagaaagaaaaactgaggcaggagagattaaatccacttctcaaggtcttatgg-aaggaggcagtagacagaaggtttgaatc-------------cgggagtatgccatgatacagatcacact-cccctaccacccagcaccacCGCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103413774 516 - 106955855 GAAAAAGGGTTTTGCAGTTC----CCCTGACGCCA-CCTGATGGCTGAGCTTCTGTTATGTGCATGCAAGT-GGGGATTCAAGAAT--TCTTAGGAAAGGTAACCGTAGGAAGAAATTGAGAAC------AGGACACAGAGAAGGATGTGGCTGGGAAGCGCCTGGCCCATGGGAGTGGGAGGGGAAGCAGATAATTCCCTGTCTACTTCAGATACCACGAATGCTATTGTAACCATTCccatttattgagcaacttctgtgtgctaagccctggcagcatcttaAGAATGATAATAACAGTTACTGAGGCttcaaaatacttcacctccatcatctgattgaatttgcccaacagccctatcagatgg--------------tta----ctatgttacagaaagagaaactgaggtaggagagattaagtctcctcctcaaagtcttatggcaaggaggcagcgcacagagggtttgaatccaggactttgaatcaggactctgCCATGGTAGAGATCACACT-CCCTTACCACCCAGCACCACCG-CT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60723468 505 + 64156825 GAAAAAGGGTTTATCAGTTC----CCCTGACGCCA-CCTGATCTCTGAGCTTCTGTTATGCGCATGGAAGT-GGGGATCCAAGAAT--TCTTAGGAAAGGTAACCTTAGGAAGAAATCAAGGACAAG---AGGAGACAGAGAGGGATGCGGCTGGGAAGCGCCTGGCCCATGGGGGTGGGAGGGGAAACAGATAATTCCCTGTCTACTTCAGATACTACTAATGCTATTGtaacaatccccatttattgagcaacttctgtgtgctaagccctggcagcatcttaAGAATGATAataacagttattgaggcttcaaaatacttcacctgcatcatctgactgaatttgcccaacagccctaccagatag--------------tta----ctatgttacagaaag--aaaccgaggca-gagagattaagtccccttctcaaggtcttatggcaaggaggcagtagacagaggatttgaatc-------------caggactatgccatggttgagaccacgctccccctaccacccagcaccaccGCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55881045 505 + 59248254 GAAAAAGGGTTTATCAGTTC----CCCTGACGCCA-CCTGATCTCTGAGCTTCTGTTATGCGCATGGAAGT-GGGGATCCAAGAAT--TCTTAGGAAAGGTAACCTTAGGAAGAAATCAAGGACAAG---AGGAGACAGAGAGGGATGCGGCTGGGAAGCGCCTGGCCCATGGGGGTGGGAGGGGAAACAGATAATTCCCTGTCTACTTCAGATACTACTAATGCTATTGTAACAATCCCcatttattgagcaacttctgtgtgctaagccctgGCAGCATCTTAAGAATGATAATAACAGTTATTGAGGCTTCAaaatacttcacctgcatcatctgactgaatttgcccaacagccctaccagatag--------------tta----ctatgttacagaaag--aaaccgaggca-gagagattaagtccccttctcaaggtcttatggcaaggaggcagtagacagaggatttgaatc-------------caggactatgccatggtcgagaccacgctccccctaccacccagcaccaccGCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969318 506 + 51301725 GAAAAAGGGTTTATCAGTTC----CCCTGACGCCA-CCTGATCTCTGAGCTTCTGTTATGTGCGTGGAAGT-GGGGATCCAAGAAT--TCTTAGGAAAGGTAACCTTAGGAAGAAATCGAGGAcaag---aggagacagagagggatGCGGCTGGGAAGCGCCTGGCccatgggggtgggaggggaaacAGATAATTCCCTGTCTACTTCAGATGCTACTAATGCTATTGTAACAATCcccatttattgagcaacttcTGTGTGCTAAGCCCTGGCAGCATCTTAAGAATGATAATAACAGTTATTGAGGCTTCAAAATACTTCACCTGCATCATCTGACTGAATTTGCCCAACAGCCCTACCAGATAG--------------TTA----CTATGTTACAGAAAG--AAACCGAGGCAGGAGAGATTAAGTCCCCTTCTCAAGGTCTTATGGCAAGGAGGCAGTAGACAGAAGGTTTGAATC-------------CAGGACTATGCCATGGTAGAGACCACACTCCCCCTACCACCCAGCACCACCGCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47669501 505 + 50890351 GAAAAAGGGTTTATCAGTTC----CCCTGACACCA-CCTGATCTCTGAGCTTCTGTTATGCGCATGGAAGT-GGGGATCCAAGAAT--TCTTAGGAAAGGTAACCTTGGGAAGAAATCGAGGACAAG---AGGAGACAGAGAGGGATGTGGCTGGGAAGCGCCTGGCCCATGGGGGTGGGA-GGGAAACAGATAATTCCCTGTCTACTTCAGATACTACTAATGCTGTTGTAACAATCCCcattgattgagcaacttctgtgtgctaagccctgGCAGCATCTTAAGAATGATAataacagttattgaggcttcaaaatacttcacctgcatcatctgactgaatttgcccaacagccccaccagatag--------------tta----ctatgttacagaaag--aaaccgaggcaggagagattaagtccccttctcaaggtctcatggcaaggaggcagtagacagaggatttgaatc-------------caggactATGGCATGGTGGAGACCACACTCCCCCTGCCACCCAGCACCGCCGCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 78161 501 + 138250 GAAAAAGGGTTTTTCAGTAC----CCCCGACTCCACCCTTATCTCTGAGCTTCTGTTATTTACATGCAAGT-TGGAATTCAAGATTCCTCTTGGGAAAGGTAACCTTAGGAAGGAATTGGGGACAGA---AGGTGTCACAGAAGGATGTGGCTGGGAAGCGCCTGGCCCAGAGAAGTGGGAAGGGAAGAAGATAATT-CCTGTCTACTTCAGATACCACTAATGCTATagtaatgattcccatttattgagcaacttctgtgtgctaaaccctggcagcatcttaagaatgataataacagttattgaggcttcgaaatatgtcacctgcatcatc----tgaatttgcccaacagccttgctaggtag-----------------------atattacagaaggagaaactgaggcaggagagattaagacctcttctctaggtcttatgtcaaggaggcagtagacagagggtttgaatc-------------caggaccatgccacggccgagaccacactccccctaccacccagcaccaccGCCT i calJac3.chr22_GL285922_random I 474 C 0 s canFam3.chr1 20151690 437 - 122678785 TTCAAAGTATTTCTTGTCCCTCATCCCTGATCCTA-CCTGAGCTCTGAATTTCCATCATTTCT------GT-G---------GAAT--TCTTGGAGAAGTTGA-CTTAGAAGGA----GAGGCCAGGAGCAGGAGATGGAGAAGGATTTGGCTGGGAAGAGCCTGGCCCATGGGAGTAGGAGGGGG---AGATAAGTCTCTGTCTACACCAAAT---ACTAATGCTGTTGTAAAAAACCccatttactgagcacctactgtgtgctacccttt----gcatcgtagcactgacagtta-agttattgaggctgtgaaccctctcaac-------tctccatgaatcca-ccaacagctctaccagatggaggctattggataattaacccctatctcagagaaaaggaaaccaaggcgggagatattcagtctcctccccagggtcttatggcaagacagtatt-gacagaggatgccaag--------------------------------------------------------------------- i canFam3.chr1 C 0 C 0 a score=323905.000000 s hg38.chr19_GL949747v2_alt 722773 176 + 729520 GACCTGACCTGtctttttttttttttttttttttttgagatggagtctcactctgctgccaggctggagtgcagtggcacgatctggactcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcccacgtagctggcactacaggcgcccaccaccacac s panTro4.chr19 59990822 173 + 63644993 GACCTGACCTGtc---ttttttttttttttttttttgagatggggtctcactctgctgccaggctggagtgcagtggtgcgatctcgactcactgcaacctccgcctcccaggttcaagtgattctcctgccttagcctcccacgtagctgggactacaggcgcccgccactacac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946031 172 + 60714840 GACCTGACCTGtc----tttttttgtttgtttgtttgagatggggtctcactctgctgccaggctggagtgcagtggcgcgatctcgactcactgcaacttccgcctcccaggttcaagtgattctcctgccttagcctcccatgtagctgggactataggcgcatgccaccacac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414290 169 - 106955855 GA-CTGACCTGtc------tttttttttctttttttgagatggggtctcactctgctgccaggctggaatgcagtggcgcaatctcgactcactgcaacctccgcctcctaggttcaagtgattctcctgccttggcctcccacgtagctgggactacaggcgcacgccaccacac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60723973 158 + 64156825 GACCTGtct--tc--------------ttttttttcgagatggggtctcg--ctgttgccaggctggagtgcagtggcgcgatctcagctcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcccacgtagctgggactacaggcacccgccaccacac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55881550 154 + 59248254 GACCTGtct--tc--------------ttttttttcgagatggggtctcg--ctgttgccaggctggagtgcagtggcgcgatctcagctcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcccacgtagctgggactacag----ccgccaccacac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969824 157 + 51301725 gacctgtct--tc---------------tttttttcgagatggggtcacg--ctgttgccaggctggagtgcagtggcgcgatctgagctcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctctcacgtagctgggactacaggcacccgccaccacac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670006 166 + 50890351 GACCTGtct--tc------ttctttttttttttttcgagatggggtctca--ctgttgccaggctggagtgcagtggcacgatctcagctcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcccacgtagctgggactacagtcacccgccaccacac i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20152127 57 - 122678785 ----------------------------------------------------------ccaggtctgTGGGCGGAGG--------------------------GGCTCCCAAT----------------------------------ACTGGAACCACACAC-TCTACCACCACCC i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 78662 0 + 138250 C a score=14525.000000 s hg38.chr19_GL949747v2_alt 722949 6 + 729520 ccagct s panTro4.chr19 59990995 6 + 63644993 ccagct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946203 6 + 60714840 ccagct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414459 6 - 106955855 ccagct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724131 6 + 64156825 ccagct i rheMac3.chr19 C 0 M 372 s macFas5.chr19 55881704 6 + 59248254 ccagct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969981 6 + 51301725 ccagct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670172 6 + 50890351 ctggct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20152184 0 - 122678785 C e calJac3.chr22_GL285922_random 78662 0 + 138250 C a score=94119.000000 s hg38.chr19_GL949747v2_alt 722955 56 + 729520 aa--tttttgtatttttagtagagacagggtttcaccatgttggccaagatggtctca s panTro4.chr19 59991001 56 + 63644993 aa--tttttgtatttttagtagagacagggtttcaccatgttggccaagatggtctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946209 56 + 60714840 aa--tttttgtatttttagtagagacagggtttcaccatgttggccaagatggtcttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414465 56 - 106955855 aa--cttttgtatttctagtagagacagggtttcaccacgttggccaagatggtctcg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55881710 58 + 59248254 aatttttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969987 56 + 51301725 aa--tttttgtattgttagtagagatggggtttcaccatgttggccaggctggtctcg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670178 56 + 50890351 aa--tctttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20152184 0 - 122678785 C e calJac3.chr22_GL285922_random 78662 0 + 138250 C e rheMac3.chr19 60724137 372 + 64156825 M a score=13244.000000 s hg38.chr19_GL949747v2_alt 723011 5 + 729520 atctc s panTro4.chr19 59991057 5 + 63644993 atctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946265 5 + 60714840 atctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414521 5 - 106955855 atctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724510 5 + 64156825 atctc i rheMac3.chr19 M 372 C 0 s macFas5.chr19 55881768 5 + 59248254 atctc i macFas5.chr19 C 0 I 386 s papAnu2.chr19 47970043 5 + 51301725 atctc i papAnu2.chr19 C 0 I 312 s chlSab2.chr6 47670234 5 + 50890351 atctc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20152184 0 - 122678785 C e calJac3.chr22_GL285922_random 78662 0 + 138250 C a score=79264.000000 s hg38.chr19_GL949747v2_alt 723016 34 + 729520 ttgactttgtgatccgcccacctctgcctcccaa s panTro4.chr19 59991062 34 + 63644993 ttgactttgtgatccgcccacctctgcctcccaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946270 34 + 60714840 ttgactttgtgatccgcccacctttgcctcccaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414526 34 - 106955855 ctgacctcgtgatccgcctgcctctgcctcccaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724515 34 + 64156825 ttgactttgtgatccgcccgtctcggcctcccaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882159 34 + 59248254 ttgactttgtgatccgcccatctctgcctcccga i macFas5.chr19 I 386 C 0 s papAnu2.chr19 47970360 34 + 51301725 ttgactttgtgatccgcccatctctgcctcccga i papAnu2.chr19 I 312 C 0 s chlSab2.chr6 47670239 34 + 50890351 ttgactttgtgatccacccatctctgcctcccga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20152184 0 - 122678785 C e calJac3.chr22_GL285922_random 78662 0 + 138250 C a score=94391.000000 s hg38.chr19_GL949747v2_alt 723050 38 + 729520 agtgctgggattacaggcgtgagccaccgcgcccagcc s panTro4.chr19 59991096 38 + 63644993 agtgctgggattacaggcgtgagccaccgcgcccagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946304 38 + 60714840 agtgctgggattacaggcgtgagccaccacgcccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414560 38 - 106955855 agtgctgggattacaggcgtgagccaccgcgcccggcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724549 38 + 64156825 agtgctgggattacaggcgtaagctaccgcgtccggcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882193 38 + 59248254 agtgctgggattacaggcgtgagctaccgcgtccggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47970394 38 + 51301725 agtgctgggattacaggcgtgagctaccgcgcccggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670273 38 + 50890351 agtgctgggattacaggcgtgagctaccgcgcctggcc i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20152184 22 - 122678785 GGTACCAGAGTTACCTGTGTGA---------------- i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 78662 0 + 138250 C a score=3276.000000 s hg38.chr19_GL949747v2_alt 723088 1 + 729520 T s panTro4.chr19 59991134 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946342 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414598 1 - 106955855 T i nomLeu3.chr10 C 0 I 134 s rheMac3.chr19 60724587 1 + 64156825 T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882231 1 + 59248254 T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47970432 1 + 51301725 t i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670311 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 78662 1 + 138250 T i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20152206 0 - 122678785 C a score=857482.000000 s hg38.chr19_GL949747v2_alt 723089 285 + 729520 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTCaataataataataataataataataataataataataataaCCCTTCCATCGCTCCCCATTACCTTCGTCATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCCACAGGATCTGCCCCCAGTCCCACAGTCTCTCTCATTCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCAAAGCCAAGCGCCAAGTCTATCTATGGTGAGC-GGGGGG--CAAGGGAGCCCCAGGCCCATAGAActgggtct s panTro4.chr19 59991135 273 + 63644993 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTC------------aataataataataataataataataataaCCCTTCCATCGCTCCCCATTACCTTCGTAATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCCACAGGATCTGCCCCCAATCCCACAGTCTCTCTCATTCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCGAAGCCAAGCGCCAAGTCTATCTATGGTGAGC-GGGGGG--CAAGGGAGCCCCAGGCCCATAGAACTGCGTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946343 262 + 60714840 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTC---------------------AATAATAACAATAATAATAACCCTTCCATCGCTCCCCATTACCTTTGTAATG-ATCCCTTGCTGCCCTGCTTGGCATT-----TCCATAGGATCTGCCCCCAATTCCACAGTCTCTCTCATTCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCGAAGCCAAGCGCCAAGTCTATCTATGGTGAGT--GGGGT--CAAGGGAGCCCCAGGCCCATAGAACTGGGTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414733 260 - 106955855 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTC------------------------AATAATAACAATAATAACCATTCCATCGCTCCCCGTTACCTTCGTAATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCCACAGGATCTGCCCCCAATTCCACAGTCTCTCTCATTCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCGAAGCCAAGCGCCAAGTCTATCTATGGTGAGT--GGGGG--CAAGGGAGCCCCAGGCCCATAGAActgggtct i nomLeu3.chr10 I 134 C 0 s rheMac3.chr19 60724588 270 + 64156825 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTC---------------aataatagtaaaaataataataataaCCCTTCCATGGCTCCCCATTACCTTCATAATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCCACAGGGTCCGCCCCCAATTCCACAGTCTCACTCATCCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCAAAGCCAAGTGCCAAGTCTATCTATGGTGAGT-AGGAGG--CAAGGGAGCCCCAGGCCCATAGAACTGGGTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882232 270 + 59248254 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTC---------------aataatagtaaaaataataataataaCCCTTCCATGGCTCCCCATTACCTTCATAATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCTGCAGGGTCCGCCCCCAATTCCACAGTCTCACTCATCCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCAAAGCCAAGTGCCAAGTCTATCTATGGTGAGT-AGGAGG--CAAGGGAGCCCCAGGCCCATAGAActgggtct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47970433 270 + 51301725 acctgtCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCtc---------------aataatagtaaaaataataataataacccttCCATAGCTCCCCATTACCTTCATAATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCCGCAGGATCCGCCCCCAATTCCACAGTCTCACTCATCCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCAAAGCCAAGTGCCAAGTCTATCTATGGTGAGT-AGGAGG--CAAGGGAGCCCCAGGCCCATAGAACTGGGTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670312 270 + 50890351 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTC---------------aataatagtaaaaataataataataaCCCTTCCATGGCTCTCCATTACCTTCATAATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCCGCAGGATCCGTCCCCAATTCCACGGTCTCACTCATCCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCAAAGCCAAGCGCCAAGTCTATCTATGGTGAGT-GGGGGG--CAAGGGAGCCCCAGGCCCATAGAActgggtct i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 78663 247 + 138250 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTC---------------------------------AAAATAATAATAA----CCTTCCATGGCTCTGCATTGCCCTTGTAATGAAGCCCTGGCT-CCCTGCTTGGCATT-----TCTGCAGAATCTG-CCCCAATTCCACAGTCTCTCTCACCCCTCTTTTCTTCACCAGCCCAGAACCTGCCCCGAAGCCAAGCGCCAAGTCTATCTATGGTGAGT-GGGGGGGAGAAGAGAATCCCAGGCCT-CAGAACTGGGTCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20152206 235 - 122678785 -------------AAATCCAGCTCTGGACCGGCCCTCCTCTGCTC-------------------------AGAA-------------CCCTCCATGGTTCCCCACTGCCCTTACGATGAAGTCTTTGCTGCTCTGCTTGGCACTCAAGATCCCCATGATCT--CCCAATTCCCAAGGTCTCTTTCATTCTTTTTTCCTTATCCAGCCCAGAGGCTGCCCCCAAACCAAGTGCCAAGTCAATCTATGGTGAGTTTCAGAG--CAAGAGAACTCCAGGC---TGAAACTGGGTCT i canFam3.chr1 C 0 C 0 a score=45991.000000 s hg38.chr19_GL949747v2_alt 723374 17 + 729520 aaagaaacaggacctgg s panTro4.chr19 59991408 17 + 63644993 AAAGAAACAggacctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946605 17 + 60714840 AAAGAAACAGGACCTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414993 17 - 106955855 aaagaaacaggacctgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724858 17 + 64156825 AAAGAAACAGGACCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882502 17 + 59248254 aaagaaacaggacctgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47970703 9 + 51301725 AAAGAAACA-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670582 17 + 50890351 aaagaaacaggacctgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 78910 17 + 138250 AAAGAAACAggatctgg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C a score=36543.000000 s hg38.chr19_GL949747v2_alt 723391 20 + 729520 catccagggtcttggaggag s panTro4.chr19 59991425 20 + 63644993 catccagggtcttggaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946622 20 + 60714840 CATccagggtcttggaggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103415010 20 - 106955855 catccagcgtcttggaggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724875 20 + 64156825 AATccagggtcttggaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882519 20 + 59248254 aatccagggtcttggaggag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47670599 20 + 50890351 aatccagggtcttggaggag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e calJac3.chr22_GL285922_random 78927 0 + 138250 C e papAnu2.chr19 47970712 0 + 51301725 C a score=7007.000000 s hg38.chr19_GL949747v2_alt 723411 8 + 729520 gaggggct s panTro4.chr19 59991445 8 + 63644993 gaggggct i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60724895 8 + 64156825 gagaggct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882539 8 + 59248254 gagaggct i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47670619 8 + 50890351 gagaggct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e calJac3.chr22_GL285922_random 78927 0 + 138250 C e nomLeu3.chr10 103415030 0 - 106955855 C e papAnu2.chr19 47970712 0 + 51301725 C a score=1760.000000 s hg38.chr19_GL949747v2_alt 723419 5 + 729520 ggggg s panTro4.chr19 59991453 5 + 63644993 ggggg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60724903 3 + 64156825 --ggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882547 3 + 59248254 --ggg i macFas5.chr19 C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e calJac3.chr22_GL285922_random 78927 0 + 138250 C e nomLeu3.chr10 103415030 0 - 106955855 C e chlSab2.chr6 47670627 0 + 50890351 C e papAnu2.chr19 47970712 0 + 51301725 C a score=3221.000000 s hg38.chr19_GL949747v2_alt 723424 12 + 729520 tctggactcctg s panTro4.chr19 59991458 12 + 63644993 tctggactcctg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60724906 12 + 64156825 cctggactcctg i rheMac3.chr19 C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e calJac3.chr22_GL285922_random 78927 0 + 138250 C e nomLeu3.chr10 103415030 0 - 106955855 C e chlSab2.chr6 47670627 0 + 50890351 C e papAnu2.chr19 47970712 0 + 51301725 C e macFas5.chr19 55882550 0 + 59248254 C a score=1628.000000 s hg38.chr19_GL949747v2_alt 723436 17 + 729520 agtcagagggaagaggt s panTro4.chr19 59991470 17 + 63644993 agtcagagggaagaggt i panTro4.chr19 C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e calJac3.chr22_GL285922_random 78927 0 + 138250 C e nomLeu3.chr10 103415030 0 - 106955855 C e chlSab2.chr6 47670627 0 + 50890351 C e papAnu2.chr19 47970712 0 + 51301725 C e macFas5.chr19 55882550 0 + 59248254 C e rheMac3.chr19 60724918 0 + 64156825 C a score=8355.000000 s hg38.chr19_GL949747v2_alt 723453 198 + 729520 gctgggggtctggactcctgggtcagagggaagaggggctggggggctggactcctaggtttgagggaggaggggctgggggcctggactcctgagtcagagggaagaggtgctgggggc-ctggactcctgggtcagagggaagaggggctggggg-gctggactcctgggtcagagggaagaggggctggggggctgg s papAnu2.chr19 47970712 157 + 51301725 -----GGACCTGGAATCCAGGGTC------------------------------------ttggaggaggagaggctggg--ccTGGACTCCTGAGTCTGAAGGAGGAgggcctgggggctctggactcctgggtctgaggaaggtggggctgggggctctggactcctgggtctgaggaaggtggggctgggggcctgg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e calJac3.chr22_GL285922_random 78927 0 + 138250 C e nomLeu3.chr10 103415030 0 - 106955855 C e chlSab2.chr6 47670627 0 + 50890351 C e macFas5.chr19 55882550 0 + 59248254 C e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=45160.000000 s hg38.chr19_GL949747v2_alt 723651 217 + 729520 actcctgggtcagagggaagaggggctggggggctggactcctgggtcagagggaagaggggctggggggctggactcctgggtcagagggaagaggggctggggg-gctggactcctgggtcagagggaagaggggctgggggtctggactcctgagtcagagggaagaggggctggggggctggactcctgggtcagagggaagaggggctggggg s papAnu2.chr19 47970869 217 + 51301725 actcctgggtctgaaggaggagggcctggggtcctggactcctgggtctgagggaggaggggctggggtcctggactcctgggtctgaggaaggtggggctgggggctctggactcctgggtctgaggaaggtggggctgggggcctggactcctgggtctgaaggaggagggcctgggggcctggactcctgggtctgagggaggagggactgggg- i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 78927 212 + 138250 actcctgggtctgagggaggaggggctggga--ctagactcctgggtctgagggaagaggggctgtggacctagagtcctgggtctgagggaggaggggctgggg--tctggactcctgggtctgagggaagaggggct-ggggtctggactcctgggtctgagggaggagggactgtggacctagagtcctgggtctgagggaggaggggctgggg- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e nomLeu3.chr10 103415030 0 - 106955855 C e chlSab2.chr6 47670627 0 + 50890351 C e macFas5.chr19 55882550 0 + 59248254 C e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=11081.000000 s hg38.chr19_GL949747v2_alt 723868 24 + 729520 cctggactcctgggtcagagggaa s macFas5.chr19 55882550 24 + 59248254 cctggactcctgggtctgaaggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971086 24 + 51301725 tctggactcctgagtctaagggag i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 79139 24 + 138250 tctggactcctgggtctgagggaa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e nomLeu3.chr10 103415030 0 - 106955855 C e chlSab2.chr6 47670627 0 + 50890351 C e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=29122.000000 s hg38.chr19_GL949747v2_alt 723892 37 + 729520 gaggggctgggggc-ctggactcctgggtcagagggaa s nomLeu3.chr10 103415030 37 - 106955855 gaggggctgggggc-ctggactcctgggtctgagggag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55882574 38 + 59248254 gagggcctgggggctctggactcctgggtctgagggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971110 37 + 51301725 gaggggctggggac-ctggactcctgggtctgagggag i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 79163 36 + 138250 gaggggctggggt--ctggactcctgggtctgagggag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e chlSab2.chr6 47670627 0 + 50890351 C e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=55374.000000 s hg38.chr19_GL949747v2_alt 723929 67 + 729520 gag---gggctgggggtctggactcctgggtcagagggaggaggggctgggggg-ctggactcctgggtca s ponAbe2.chr19 56946642 66 + 60714840 gag---gggctgggg-cctggactcctgggtccgagggaggaggggctgggggc-ctggactcctgggtct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103415067 45 - 106955855 gag---gggctgggg----------------------gaggaagggctgggggc-ctggactcccgagtca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55882612 70 + 59248254 gaggaagagctgaaggtctagactcctgggtctgaggaaggtggggctgggggc-ctggactcctgggtct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971147 66 + 51301725 gag---gggttgagg--ctggactcctgggtctgaggaaggtggggctgggggctctggactcctgggtct i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 79199 66 + 138250 gag---gggctggggacctagagtcctgggtctgagggaagaggggctggggt--ctggactcctgggtct i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e chlSab2.chr6 47670627 0 + 50890351 C e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=19963.000000 s hg38.chr19_GL949747v2_alt 723996 17 + 729520 gagggaagaggggctgg- s ponAbe2.chr19 56946708 17 + 60714840 gagggaggaggggctgg- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103415112 17 - 106955855 gagggaagaggtgctgg- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55882682 17 + 59248254 gaaggaggagggtctgg- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971213 16 + 51301725 gagggaggggggact-g- i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 79265 17 + 138250 gagggaggaggggctgg- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20152441 18 - 122678785 GAGGGAGGAGGGGGCTGA i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47670627 0 + 50890351 C e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=69560.000000 s hg38.chr19_GL949747v2_alt 724013 32 + 729520 gggcctggactcctgggtttgagggaggagg---g s ponAbe2.chr19 56946725 35 + 60714840 gggcctggactcctgggtctgagggaggaggaagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103415129 32 - 106955855 gggtctggactcctgggtcagagggaagagg---g i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55882699 32 + 59248254 gggcctggactcctgggtctgaaggaggagg---g i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971229 32 + 51301725 gggtctggactcctgggtctgagggaggagg---g i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670627 32 + 50890351 gggcctggactcctgggtctgagggaggagg---g i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 79282 32 + 138250 gaacctggacttttgggtctgagggaggagg---g i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20152459 32 - 122678785 GGGCCTGCACCCCAGGGTCTGAGAGAGGAGG---G i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=117133.000000 s hg38.chr19_GL949747v2_alt 724045 57 + 729520 gctgggggc-ctggactcctgggtcagagggaagag---gggctggg---------------gg-gctggactccta s panTro4.chr19 59991487 57 + 63644993 gctgggcgg-ctggacttctgggtcagagggaagag---gggctggg---------------gg-gctggactccta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946760 57 + 60714840 gctggaggt-ctggactcctgggtcagagggaagag---gggctggg---------------gg-gctggactccta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103415161 57 - 106955855 gctgggggt-ctggactcctgggtcagagggaagag---gggcgggg---------------gg-gctggactccta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55882731 59 + 59248254 cctgggggctctggactcctgggtctgaggaaggtg---gggctggg---------------ggctctggactcctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971261 56 + 51301725 gttgagg---ctggactcctgggtctgaggaaggtg---gggctggg---------------ggtTCTGGACTCCtt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670659 60 + 50890351 gctgggggc-ctggactcctgggcctgagggaggaggaagagctgaa---------------gg-tctagactcctg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 79314 57 + 138250 gctgcgtac-ctagagtcctgggtctgagggaggag---gggctggg---------------ag-cctggactcttg i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20152491 71 - 122678785 -CTGGGGGC-CTGGACTCTTGGGTCTGAGAGGGGAG---GTCCCAGGACAAGGGGGAACCATGG-TCCGGATTCCTA i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60724918 0 + 64156825 C a score=7933741.000000 s hg38.chr19_GL949747v2_alt 724102 2366 + 729520 ggtttgagggaggaggggctgggg-gcctggactcctggg-tctgatggagga-ggggctgg---gcctggactCCCAGGCTCATTCTCTTTCTCCCCTGGCAGAGCAGAGGAAGCGTTACTCCACAGTTGTTATGGCTGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGGTCTGTGTTCCCCCAGGACATCTTCTGGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTTGAAAGCAGCTAGGCCCCCAAGCAGGAAGCATGT-GGAAAGTCAGTTTGCCCATCCATAAAATGGACCTCCGTTGCCTCACCTCAGTCATGGATATGAAGCCAGGGGCCTCGGGTCCACT-TAATCTGCCAGCCTTTCCTCCAGGCCAGCTGTTGTGCTGGACAGTGGGACCACGGAGGCAAATCAAGACACAGCCCTGCATGAGGAAGGGGTAGACAAGGTCCAGAGGAATCCACAGAGGCGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCATGGCAGGAGACCCGAGGAGGCATTTAGAAGGAGAGAGCTataatccagactccttccctgcccgcaaggagcctccagtc-tg-tgagaagccagactcaggtgctagtcactctgatgaaagggaaacaaagggcactggg---------aggaggagctg-------atttgtggaacaggtgatcaaggaaggcttcctggaggaggtgtggttagtctcaggctgaaagtctgattaTTCTGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTTTCTCCATGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCATACCGTGGAGGATGCCTCCAGGAAGTTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCGGGGGGCACGTGGgtgggaggagtgtct--------------ggggcaggga---------cttcagggggtctgggtgtgaatcttggctcctgcacgtccttcctctgggaactctggcgagggaccccagcccccttcttgagccttaatagcctcatctattaaacagggctgttatccctaaccccctaaccgcctgaggttgcc---------ctgaCCTGCTGGCCCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCCGCCATCCCACCCGGCAGGAGGAGCTGGAGTCGTACCCACTGGGCGCCATCGTGCGCTGTGACGCGGTGATGCCACCCGGCAGGAGCCGCTCGTTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTCGGGGTGAGCaga-------tgggctggctctgggggtggagctggaactgggcgga-gcctggagccggggcggaaatgggtggggcctctagg---tggggcggggcctggggctAAGGCGGGATCAGAGCAAGGAAGGGCAGGGGACCTGGGAAGGAAGTTCTGGAAGGCAGTGGGGTTT---GAGATTGGACCCAG---GGTCAAGATAGAACATGAAGGTGGGA-----------------------------TGAGGACATGAACAGAACATGGCCAAGAAGGATCTGGGGGAGCAGCCAGGACGAGG-------------TGGGGGCGAGGAACCACCCGGACTGGGTCTCCATGGGCGGGGTCGTGGCTTAGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTTCGGGGCGTGGACGTGCGTGGG-TTCACAGGTGTGAACGGTAGCCGCACGTGGGCTGGGACTGAGCTGAAAAATCGGCCAGGGGCGAGGCCC-GGGTAGGAAGTGGGTGCGGCGTGGGGAGGCGTGGCCTGACGGTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AGGGAAGAAG------TTGGCAGGGTCTCTGGGAAGCCGGTTTCCCCTCCTTGTGCCT-------------------CAGTCT-----------------------ACAA-CACCAGCCTGGAACAGAACAAGAGTTTTGCATGGAGTCAAGCACACCCTAG-TCGAGTCTTGTCTGTACCTCCCAGACGAGCTGACCCCTTCTCCAGAACTC-TGCTTCTT--------TTCTCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTATC-------------------------CCTCCGTATAT---CGGATTTCTCCCTACCTCGTTGAACTTGTTCACTCCCTTTGAGCCTTTTGAGCCT--GTGTGTCTCGTTCTGCGCCCTGGATTTCCCCCTCCCTGGACCCCTCAGTGGACCCAGTCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC s panTro4.chr19 59991544 2391 + 63644993 ggtctgagggaggaggggctgggg-gcctggactcctggg-tctgatggagga-ggggctgg---gcctggactCCCAGGCTCATTCTCTTTCTCCCCTGGCAGAGCAGAGGAAGCGTTACTCCACAGTTGTTATGGCTGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGGTCTGTGTTCCCCCAGGACATCTTCTGGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTTGAAAGCAGCTGGGCCCCCAAGCAGGAAGCATGT-GGAAAGTCAGTTTGCCCATCCATAAAATGGACCTCCATTGCCTCACCTCAGTCACGGATATGAAGTCAGGGGCCTCGGGTGCACT-AAATCTGCCAGCCTTTCCTCCGGGCCAGCTGTTGTGCTGGACAGTGGGACCACGGAGACAAATCAAGACACAGCCCTGCATGAGGAAGGGGTAGACAAGGTCCAGAGGAATCCACAGAGGCGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCACAGCGGGAGACCCGAGGAGGCATTTAGAAGGAGAGAGCTataatccagactccttccctgcccgcaaggagcctccagtc-tg-tgagaagccagactcaggtgctagtcactctgatgaaagggaaacaaagggcactggg---------aggaggagctg-------atttgtggaacaggtgatcaaggaaggcttcctggaggaggggtggttagtctcaggctgaaagtctgattaTTCTGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTTTCTCCATGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCATACCGTGGAGGATGCCTCCAGGAAGTTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGGGGGCACGTGGgtgggaggagtgtct--------------ggggcaggga---------cttcagggggtctgggtgtgaatcttggctcctgcacgtccttcctctgggaactctggcgagggaccccagcccccttcttgagccttaatagcctcatctattaaacagggctgttatccctaaccccctaaccgcctgaggttgcc---------ctgaCCTGCTGGCCCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCCGCCATCCCACCCGGCAGGAGGAGCTGGAGTCGTACCCACTGGGCGCCATCGTGCGCTGTGACGCGGTGATGCCACCCGGCAGGAGCCGCTCGTTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTCGGGGTGAGCGGA-------Tgggctggctctgggggtggagctggaactgggcgga-gcctggagccggggcggaaatgggtggggcctctagg---tggggcggggcctggggctaaggcgggATCAGAGCAAGGAAGGGCAGGGGACCTGGGAAGGAAGTTCTGGAAGGCAGTGGGGTTT---GAGATTGGACCCAG---GGTCAAGATAGAACATGAAGGTGGGA-----------------------------TGAGGACATGAACAGAACATGGCCAAGAAGGGTCTGGGGGAGCAGCCAGGACGAGG-------------TGGGGGCGAGGAACCACCCGGACTGGGTCTCCATGGGCGGGGTCGTGGCTTAGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTTCGGGGCATGGACGTGCGTGGG-TTCACAGGCGTGAACGGTAGCCGCACGTGGGCTGGGACTGAGCTGAAAAATCGGCCAGGGGCGAGGCCC-GGGTAGGAAGTGGGTGCGGCGTGGGGAGGCGTGGCCTGACGGTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGGGAACGCAGGGCGGCGGCGCTCAGGTGAG-----------------AGGCAAGAAG------TTGGCAGGGTCTCTGGGAAGCCGGTTTCCCCTCCTCGTGCCT-------------------CAGTCT-----------------------ACAA-CACCAGCCTGGAACAGAACAAGAGTTTTGCATGGAGTCAAGCACACCCTAG-TCGAGTCTTGTCTGTACCTCCCAGACGAGCTGACCCCTTCTCCAGAACTC-TGCTTCTT--------TTCTCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTATCCCTCCCTATATCGGATTTCTCCCTACCTCCCTATAT---CGGATTTCTCCCTACCTCGTTGAACTTGTTCATTCCCTTTGAGCCTTTTGAGCCT--GTGTGTCTCGTTCTGCGCCCTGGATTTCCCCCTCCCTGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946817 2347 + 60714840 tgtctgagggagaaggggctgggg-gcctggactcctgagttctgatggaggagggggctgg---gcctggactCCCAGGCTCATTCTCTTTCTCCCCTCGCAGAGCAGAGGAAGCGTTACTCCACAGTTGTTATGGCTGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGATCTGTGTTCCCCCAGGACATCTTCTGGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTTGAAAGCAGCTGGGCCCCCAAGCAGGAAGCATGT-GGAAAGTCAGTTTGCCCATCCATAAAATGGACCTCCGTTGCCTCACCTCAGTCATGGATATGAAGTCAGGGGCCTCGGGTCCTCTCAAATCTGCCAGCCTTTCCTCCCGGCCAGCTGTTGTGCTGGACAGTGGGACCATGGAGACAAATCAAGACACAGCCCTGCATGAGGAGGGGGTAGACAAGGTCCAGAGGAACACACGGAGGTGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCACAGCGGGAGACCCGAGGAGGCATTTAGAAGGAGAGAGCTataatccagactccttccctgccggcaaggagcctccagta-tg-tgagaagccagactcaggtgctagtcactctgatgaaagggaaacagagggcactggg---------aggaggagctg-------atttgtggaacaggtgatcaaggaaggcttcctggaggaggtgtggttagtctcaggctgaaagtctgattaTTCCGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTTTCTCCGTGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCACACCGTGGAGGATGCCTCCAGGAAGCTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGGGGGCACGTGGgtgggaggagtgtct--------------ggggcaggga---------cttcagggggtctgggtgtgaatcttggctcctgcacgtccttcctctggga-------------accccagcctccttcttgagccttaatagccttacctattaaacaggggtgttatccctaaccccctaaccgcatgaggttgcc---------ctgaCCTGCTGGCTCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCCGCCATCCCACCCGGCAGGAGGAGCTGGAGTCGTACCCACTGGGCGCCATCGTGCGCTGTGACGCCGTGATGCCACCCGGCAGGAGCCGCTCGTTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCAGACGTGCACTTCTTCCAGGGCCTGCGCCTCGGGGTGAGCGGA-------CAggctggctctgggggtggagctggaactgggcgga-gcctggagccggggcggacatgggtggggcctctagg---tggggcggggcctgggactaaggcgggATCAGAGCAAGGAAGGGCAGGGAACCTGGGAAGGAAGTTCTGGAAGGCAGTGGGGTTT---GAGATTGGACCCAG---GGTCAAGACAGAACGTGAAGGTGGGA-----------------------------TGAGGACATGGACAGAACATGGCCAAGAAGGGTCTCGGGGAGCAGCCAGGACGAGGA------------TGGGGGCGAGGAACCACCCGGACTGGGTCTCCATGGGCGGGGTCGTGGCTTAGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTCCAGGGCGTGGACGTGCGTGGG-TTCACAGGCGTGAACGGTGGCCGCACGTGGGCTGGGACTGAGCTGAAAAATCGGCCAGGGGCGAGGCCC-GGGTAGGAAGTGGGTGC----------GGCGTGGCCTGACGGTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AGGGAAGAAG------TTGGCAGGGTCTCTGGGAAGCCGGTTTCACCTCCTTGTGCCT-------------------CAGTCT-----------------------ACAA-CACCAGCCTGGAACAGAACAAGAGTTTTGCATGGAGTCAAGCACACCCTAG-TCGAGTCTTGTCTGTACCTCCCAGACGGGCTGACGCCTTCTCCAGAACTC-TGCTTCTT--------TTCTCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTATC-------------------------CCTCCCTATAT---CGGATTTTTCCCTACCTCGTCGAACTTGTTCACTCCCTTTGAGCCTTTTGCGCCT--GTGTGTCTCGTTCTGCGCCCCGGATTTCCCCCTCCCTGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103415218 2339 - 106955855 ggtctgagggaggaggggctgggg-gcctggactcctggg-tctgatggaaga-ggggctgg---gcctggactCCCAGGCTCATTCTCTTTCTCCCCTGGCAGAGCAGAGGAAGCGTTACTCCACAGTTGTTATGGCTGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGGTCTG-----CCCCAGGACATCTTCTGGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTTGAAAGCAGCTGGGCCCCCAAGCAGGAAGCATGT-GGAAAGTCAGTTTGCCCATCCATAAAATGGACCTCCGTTGCCTCATCTCAGTCATGGATATGAAGTCAGGGGCCTCGGGTCCACTCAAATCTGCCAGCCTTTCCTCCCGGCCAGCTGTGGTGCTGGACAGTGGGACCACGGAGACAAATCAAGACAGAGCCCTGCATGAGGAGAGGGTAGACAAGGTCCAGAGGAACCCAAGGAGGCGCCTGGTGCTCTAATGGAGGTGGTAGGGGGCACAGCAGGAGACCCCAGGAGGCATTTAGAAGGAGAGAGCTataatccagactccttccctgcccacaaggagcctccagtc-tg-tgagaagccagactcaggtgctagtcactctgatggaagggaaacaaagggcactggg---------agg-ggagctg-------atttgtggaacaggtgatcaaggaaggcttcctggaggaggtgtggttagtctcaggctgaaagtctgattaTTCCGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTG-TTTCTCCGTGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGATGATGGCGTGCACACTGTGGAAGATGCCTCCAGGAAGCTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGGGGGCACATGGgtgggaggagtgtct--------------ggggcaggga---------cttcagggggtctgggtgcgaatcttggctactgcacgtccttcctctgggaactctggcgagggaccccggcccccttcttgagccttaatagcctcatctattaaacaggggtgttatcgctaaccccctaaccgcgtgaggttgcc---------ctgaCCTGCTGGCCCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCCGCCATCTCACCCCGCAGGAGGAGCTGGAGTCGTACCCACTGGGCGCCATCGTGCGCTGTGACGCGGTGATGCCACCCGGCAGGAGCCGCTCGTTGCTGTTGCTCGTGTGCCAGGAACCCGAGCGCGCCCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTCGGGGTGAGCGAA-------CGGGCTGGCTCTGGGGGTGGAGCTGGAACTGGGCGGA-GCCTGGAGCCGGGGCGGAAATGGGTGGGGCCTCTAGG---TGAGGCGGGGCCTGGGGCTAAGGCGGGACCAGAGCAAGGAAGGGCAGGGGACCTGGGAAGGAAGTTCTGGAAGGCGGCGGGGTTT---GAGATTGGACCCAG---GGTCAAGATAGAACACGAAGGTGGGA-----------------------------TGAGGACATGAACAGAACATGGCCAAGAAGGGTCTGGGGGAGCAGCCAGGACGAGGA------------TGGGGGCGAGGAACCACCCGGACTGGGTCTCCATGGGCGGGGTCGTGGCTTAGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTCCAGGGCGTGG-------------------------ACGGTGGCCGCACGTGGGCTGGGACTGAGCTGAAAAATCGGCCAGGGGTGAGGCCC-GGGTAGGAAGTGGGTGCGGCGTGGGGAGGCGTGGCCTGACGGTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATTCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AGGGAAGAAG------TTGGCGGGGTCTCTGGTTAGCCGGTTTCCCCTCCTTGTGCCT-------------------CAGTCT-----------------------ACAA-CACCAGCCTGGAACAGAACAAGAGTTTTGCATGGAGTCAAGCACACCCTAG-TCGACTCTTGTCTGTACCTCCCAGACGAGCTGACCCCTTCTCCAGAACTC-TGCTTCTT--------TCCTCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTATC-------------------------CCTCCCTATAT---CGGATTTCTTCCTACCTCGTTGAATTTGTTTACTCTCTTTGAGCCTTTTGAGCCTCAGTGTGTCTCGTTCTGCGCCCTGGATTTCCCCCTCCCTGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724918 2367 + 64156825 ggtctgaaggaggagggcctgggggctctggactcctggg-tctgagggagga-ggggctgagg-gcctggactcccaggCTCATTTTCTTTCTCCCCTGGCAGAGCAGAGGAAGCGTTACTCCACAGTGGTTATGGCCGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGATCTATGTT-CCCCAGGACATCTTCTAGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTGGAAAGCAGCTGGGCCCCAAAGCAGGAAGCATGT-GGAAAGTCAGTTTGCCCATCTGTAAAACGGACCTCCGTTGCCTCACCTCAGTCATGGATATGAAGTCAGGGACCTCGGGTCCACTCAAATCTGCCAGCCTTTTCTCCGGGCTAGCTGTTGTGCTGGACAGTGGGACCATGGGGACAAATCAAGACACAGCCCTGCATGAGGAGGGGGTAGACAAGGTCCAGAGGAACCCATGGAGGTGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCACAGCGGGAGACCCGAGGAGGCATTTAGAAggagagagctgtaatccagactccttccctgcctgcaaggagcctccagtc-tg-tgagaagccagactcaggtgctagtcactctgatgaaagggaaacaaagagcactggg---------aggaggagctg-------atttgtggagcaggtgatcaaggaaggcttcctggaggaggtgtggttagtctcaggctgaaagtctgattaTTCTGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTGTCTCCCTGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCACACCGTGGAGGATGCCTCCAGGAAGCTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGggggcacgtgggtgggaggagtgtct--------------ggggcaggga---------cttcagggggtctgggtgtgaatcttggctcctgcatgtctttcctctgggaactctggcgagggaccccagcccccttcttgagccttaatagcctcatctattaaacaggggtgttatccctaactccctaactgcgtgaggttgcc---------ctgaCCTGCTGGCCCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCTGCCATCCCACCCGGCAGGAGGAGCTGGAGTCATACCCGCTGGGCGCCATCGTGCGTTGTGATGCGGTGATGCCACCCGGCCGGAGCCGCTCGCTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTTGGGGTGAGCGGACGGCGTTCgggttggctctgggggcggagctggaactgggcgga-gcctggagccggggcggaaatgggtggggcctctagg---tggggcggggcatagggctaaggcgggATCACAGCAAGGAAGGGCATGGGACCTGGGAAGGAAGTTCTGAAAGGGAGTGGGGTTTGAGGAGACTGGACCCAG---GGTCAAGATAGCACATGAGGGTGGGA-----------------------------TGAGGACATGAACAGAACATGGGCAAGTAGGGCCTGGGGGAGCAACCAGGACGAGGA------------TGGGGGCGAGAAACCACCTGGACTGGGTCTCCATGGGCCGGGTCGTGGTTTGGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTCCAGAGTGTGGACGTGCGTGGG-AACATAGGCGTGAACGATGTACGCACGTGGGCTGGGACGGAGCAGAAAAATCGGCCAGGGGCGTGGCCC-GGGTAGGAAGGGGGTGCGGCGTGGGGAGGCGTGGCCTGAT-GTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCCGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AAGGAAGAAG------TTGGCGGGGTCTCTGGGAAGCCGGTTTCCCCTCCCTGTGCCT-------------------CAGTCT-----------------------ACAA-CACCAGACTGGAACGGAGCA--AGTTTTGCATGGAGTCAAGCACAACCTAG-TCGAGTCTTGTCTGTACCTCCCAGACGAGATGACTC----CCCAGAACTCTTACTTCTT--------TTCCCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTACC-------------------------CCTCCCCATAT---CGGATTTCTCCCTACCTCGTTGAACTTGTTTACTCCCTTTGAGCCT-------CA--GTGTGTCTCGTTCTGCGCCCCGGATTTCCCCCTCCATGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCTGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i rheMac3.chr19 C 0 M 697 s macFas5.chr19 55882790 2364 + 59248254 ggtctgagggaggaggggttgagg---ctggactcctggg-tctgagggagga-ggggctgagg-gcctggactCCCAGGCTCATTTTCTTTCTCCCCTGGCAGAGCAGAGGAAGCGTTACTCCACAGTGGTTATGGCCGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGATCTATGTT-CCCCAGGACATCTTCTAGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTGGAAAGCAGCTGGGCCCCCAAGCAGGAAGCATGT-GGAAAGTCAGTTTGCCCATCTGTAAAACGGACCTCCGTTGCCTCACCTCAGTCATGGATATGAAGTCAGGGACCTCGGGTCCACTCAAATCTGCCAGCCTTTTCTCCGGGCTAGCTGTTGTGCTGGACAGTGGGACCATGGGGACAAATCAAGACACAGCCCTGCATGAGGAGGGGGTAGACAAGGTCCAGAGGAACCCACGGAGGTGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCACAGCGGGAGACCCGAGGAGGCATTTAGAAGGAGAGAGCTGTAATCcagactccttccctgcccgcaaggagcctccagtc-tg-tgagaagccagactcaggtgctagtcactctgatgaaagggaaacaaagagcactggg---------aggaggagctg-------atttgtggagcaggtgatcaaggaaggcttcctggaggaggtgtggttagtctcaggctgaaagtctgattaTTCTGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTGTCTCCCTGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCACACCGTGGAGGATGCCTCCAGGAAGCTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGggggcacgtgggtgggaggagtgtct--------------ggggcaggga---------cttcagggggtctgggtgtgaatcttggctcctgcatgtctttcctctgggaactctggcgagggaccccagcccccttcttgagccttaatagcctcatctattaaacaggggtgttatccctaactccctaactgcgtgaggttgcc---------ctgaCCTGCTGGCCCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCTGCCATCCCACCCGGCAGGAGGAGCTGGAGTCATACCCGCTGGGCGCCATCGTGCGTTGTGATGCGGTGATGCCACCCGGCCGGAGCCGCTCGCTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTTGGGGTGAGCAGACGGCGTTCGGGTTGGCTCTGGGGGCGGAGCTGGAACTGGGCGGA-GCCTGGAGCCGGGGCGGAAATGGGTGGGGCCTCTAGG---TGGGGCGGGGCATAGGGCTAAGGCGGGATCACAGCAAGGAAGGGCATGGGACCTGGGAAGGAAGTTCTGAAAGGGAGTGGGGTTTGAGGAGACTGGACCCAG---GGTCAAGATAGCACATGAGGGTGGGA-----------------------------TGAGGACATGAACAGAACATGGGCAAGTAGGGCCTGGGGGAGCAACCAGGACGAGGA------------TGGGGGCGAGAAACCACCTGGACTGGGTCTCCATGGGCCGGGTCGTGGTTTGGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTCCAGAGTGTGGACGTGCGTGGG-AACATAGGCGTGAACGATGTACGCACGTGGGCTGGGACGGAGCAGAAAAATCGGCCAGGGGCGTGGCCC-GGGTAGGAAGGGGGTGCGGCGTGGGGAGGCGTGGCCTGAT-GTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCCGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AAGGAAGAAG------TTGGCGGGGTCTCTGGGAAGCCGGTTTCCCCTCCCTGTGCCT-------------------CAGTCT-----------------------ACAA-CACCAGACTGGAACGGAGCA--AGTTTTGCATGGAGTCAAGCACAACCTAG-TCGAGTCTTGTCTGTACCTCCCAGACGAGATGACTC----CCCAGAACTCTTACTTCTT--------TTCCCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTACC-------------------------CCTCCCCATAT---CGGATTTCTCCCTACCTCGTTGAACTTGTTTACTCCCTTTGAGCCT-------CA--GTGTGTCTCGTTCTGCGCCCCGGATTTCCCCCTCCATGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCTGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971317 2349 + 51301725 ggtctgagggaggaggggttgagg---ctggactcctggg-tctgagggagga-ggggctgggg-gcctggactcccaggctcattttctttctcccctgGCAGAGCAGAGGAAGCGTTACTCCACAGTGGTTATGGCCGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGATCTATGTT-CCCCAGGACATCTTCTAGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTGGAAAGCAGCTGGGCCCCCAAGCAGGAAGCATGT-GGAAAGCCAGTTTGCCCATCCGTAAAACGGACCTCCGTTGCCTCACTTCAGTCATGGATATGAAGTCAGGGACCTCGGGTCCACTCAAATCTGCCAGCCTTTTCTCCGGGCTAGCTGTTGTGCTGGACAGTGGGACCATGGGGACAAATCAAGACACAGCCCTGCATGAGGAGGGGGTAGACGAGGTCCAGAGGAACCCACGGAGGTGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCACAGCGGGAGACCCGAGGAGGCATTTAGAAGGAGAGAGCTGTAATCCAGACTCCTTCCCTGCCCGCAAGGAGCCTCCAGTC-TG-TGAGAAGCCAGACTCAGGTGCTAGTCACTCTGATGAAAGGGAAACAAAGAGCGCTGGG---------AGGAGGAGCTG-------ATTTGTGGAGCAGGtgatcaaggaaggcttcctggaggaggtgtggTTAGTCTCAGGCTGAAAG--TGATTATTCTGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTGTCTCCCTGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCACACCGTGGAGGATGCCTCCAGGAAGCTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGGGGGCACGTGGGTGGGAGGAGTGTCT--------------GGGGCAGGGA---------CTTCAGGGGGTCTGGGTGTGAATCTTGGCTCCTGCACGTCCTTCCTCTGGGAACTCTGGCGAGGGACCCCAGCCCCCTTCTTGAGCCTTAATAGCCTCATCTATTAAACAGGGGTGTTATCCCTAACCCCCTAACTGCGTGAAGTTGCC---------CTGACCTGCTGGCCCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCTGCCATCCCACCCGGCAGGAGGAGCTGGAGTCGTACCCGCTGGGCGCCATCGTGCGTTGTGATGCGGTGATGCCACCCGGCCGGAGCCGCTCGCTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTTGGGGTGAGCGGACGGCGTTCGGGTTGGCTGTgg----------------gggcgga-gcctggagcaggggcggaaatgggtggggcctctagg---tggggcggggcctagggcTAAGGCGGGATCACAGCAAGGAAGGGCATGGGACCTGGGAAGGAAGTTCTGAACGGGAGTGGGGTTTGAGGAGACTGGACCCAG---GGTCAAGATAGCACATGAGGGTGGGA-----------------------------TGAGGACATGAACAGAACATGGGCAAGTAGGGCCTGGGGGAGCAGCCAGGACGAGGA------------TGCGGGCGAGAAACCACCTGGACTGGGTCTCCATGGGCGGGGTCGTGGTTTGGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTCCAGAGTGTGGGCGTGCATGGG-TCCATAGGCGTGAACGATGGCCGCACGTGGGCTGGGACGGAGCAGAAAAATCGGCCAGGGGCGTGGCCC-GGGTAGGAAGGGGGTGCGGCGTGGGGAGGCGTGGCCTGAT-GTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AGGGAAGAAG------TTGGCGGGGTCTCTGGGAAGCCggtttcccctccctgtgcct-------------------cacTCT-----------------------ACAA-CACCAGACTGGAACAGAGCA--AGTTTTGCATGGAGTCAAGCACAACCTAG-TCGAGTCTTGTCTGTATCTCCCAGACGAGCTGACTCCTT-CCCAGAACTCTTACTTCTT--------TTCCCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTACC-------------------------CCTCCCCATAT---CGGATTTCTCCCTACCTCGTTGAACTTGTTTACTCCCTTTGAGCCT-------CA--GTGTGTCTCGTTCTGCGCCCCGGATTTCTCCCTCCATGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCTGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670719 2368 + 50890351 ggtctgagggaggaggggctgggg--cctggactcctggg-tctgatggagga-ggggctggggagcctggactCCCAGGCTCA-TTTCTTTCTCCCCTGGCAGAGCAGAGGAAGCGTTACTCCACAGTGGTTATGGCCGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGGTCTGTGTT-CCCCAGGACATCTTCTAGG-GCAAAGGT-----GGCCTCAGGAGACAGGGCTTTGGAAAGCAGCTGGGCCCCCAAGCAGGAAGCATGT-GGAAAGCCAGTTTGCCCATCCGTAAAACGGACCTCCGTTGCCTCACCTCAGTCATTGATATGAAGTCAGGGGCCTCGGGTCCACTCAAATCTGCCAGCCTTTTCTCCGGGCTAGCTGTTGTGCTGGACAGTGGGACCACGGGGACAAATCAAGACACAGCCCTGCATGAGGAGGGGGTAGACAAGGTCCAGAGGAACCCACGGAGGTGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCACAGCGGGAGACCCGAGGAGGCATTTAGAAGGAGAGAGCTGTAATCcagactcctcccctgcccgcaaggagcctccagtc-tg-tgagaaaccagactcaggtgctagtcactctgatgaaaggaaaacaaagagcactggg---------aggaggagctg-------atttgtggagcaggtgatcaaggaaggcttcctggaggaggtgtggttagtctcaggctgaaagtctgattaTTCTGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTGTCTCCCTGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCATACCGTGGAGGATGCCTCCAGGAAGCTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGGGGGCACGTGGgtgggaggagtgtct--------------ggagcaggga---------cttcagggggtctgggtgtgaatcttggctcctgcatgtccttcctctgggaactctggcgagggaccccagcccccttcttgagccttaatagcctcatctattaaacacgggtgttatccctaaccccctaactgcgtgaggttgcc---------ctgaCCTGCTGGCCCACACTCCCGTCGTCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCTGCCATCCCACCCGGCAGGAGGAGCTGGAGTCGTACCCGCTGGGCGCCATCGTGCGTTGTGATGCGGTGATGCCACCCGGCCGGAGCCGCTCGCTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTCGGGGTGAGCGGACGGCGTTCGGGTTGGCTCTGGGGGCGGAGCTGGAACTGGGCGGA-GCCTGGAGCCGGGGCGGAAATGGGTGGGGCCTCTAGG---TGGGGCGGGGCCTAGGGCTAAGGCGGGATCACAGCAAGGAAGGGCATGGGACCTGGGAAGGAAGTTCTGAAAGGGAGTGGGGTTTGAGGAGACTGGACCCAG---GGTCAAGATAGAACATGAGGGTTGGA-----------------------------TGAGGACATGAACAGAACATGGGCAAGTAGGGCCTAGGGGAGCAGCTAGGACGAGGA------------TGCGGGCGAGAAACCACCTGGACTGGGTCTCCATGGGCGGGGTCGTGGTTTGGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTCCAGAGTGTGGACGTGCGTGGG-AACATAGGCGTGAACGATGGCCGCAAGTGGGCTGGGACGGAGCAGAGAAATCGGCCAGGGGCGTGGCCC-GGGTAGGAAGGGGGTGCGGCGAGGGGAGGCGTGGCCTGAT-GTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AGGGAAGAAG------TTGGCGGGGTCTCTGGGAAGCCGGTTTCCCCTCCCTGTGCCT-------------------CAGTCT-----------------------ACAA-TACCAGACTGGAACGGAGCA--AGTTTTGCATGGAGTCAAGCACAACCTAG-TCGAGTCTTGTCTGTATCTCCCAGACGAGCTGACTCCTT-CCCAGAATTCTTACTTCTT--------TTCCCTGTTCCCCGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTACC-------------------------CCTCCCCATAT---CGGATTTCTCCCTACCTCGTTGAACTTGTTTACTCCCTTTGAGTCT-------CA--GTGTGTCTCGTTCTACGCCCCGGATTTCCCCCTCCATGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 79371 2328 + 138250 gttctgagggaggagAggctgggg-----------ttggg-gct---ggggct-ggggctgg---ggctggACTCCCAGGCTCATTCTCCTTCTCCCCCCGCAGAGCAGAGGAAGCGTTACTCCACGGTTGTTATGGCCGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGGTCTGTGTTTCCCCAGGTCATCTCT--GG-GCAAAGGT-----GCCCTCAGGAGATAGGGCTTATTAAAGCAGTTGGGCCCCCAAGCAGAAAGCATGT-GGAAAGTCAGTTTGCTCATCCACAAAATGGACCTCCATTGCCTCGCCTCAATTATAGATATGAAGTCAGGGACCCCGGGTCCACTCAAATCTGCCAGCCTTTCCTCT--GCCAGCTGTTGTGCTGGACAGTGGGACCATGG-GACAAATC-AGACACGGCCCTGCATGAGGAGGGGGTAGACAAGGTGCAGAGGAACCCACGGAGGCGCCTGGTGCTCTAATGGAGGAGGCAGG-----------------------------TAGAAGGAGCGAGCTATAATCCAGACTCCTTCCCT-----------GCCTCCAGTC-TG-GAAGAAGCCAGACCCAGGTGCTAGTCATGCTGATGAAAGGGAAGCAAAGGGCACTGGG---------AGGAGGAGCTG-------ATTTGTGGAGCAGGTGATCAAGGAAGGCTGCCT---AGAGGTGTGGTTAATTTCGGGCTGGAAGTCTGATTATTCCGGGGGAATTCTGAGCCCACCTGGCATAATCTTGGGCCTCACTGCTTTCTCCGTGGT-CCATACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGAAGATGGTGTGCACACCGTGGAGGATGCCTCCAGGAAGCTGTCTGTCATGGACAGCCAGGGCCGAGTCTGGGCACAAGAGATGCTGCTGCGTGTATCCCCCGACCACGTCACGCTGCTTGACCCGGCCTCCAAGGTGCCagggggtatgagcgtgggaagagtgtct--------------agggcaggga---------cttcggtggatttgggtgtgaatcttggctcctgcacgtccttcctctaggaacaatggcgagggagcccagccccattcttgagtcttaatagcctcatctattgaacaggggtgttatctctcaccccctaaccgcgcgaggtGGCC---------CTGCCCTGCTGGCCCACACTGCCCTCACC-TTTAGTCCTATCACCAGTTCGAGGCCTCAGCTTACCCC-CCATCCCACCCGCCAGGAGGAGCTGGAGTCGTACCCGCTGGGCGCCATCGTGCGCTGCGACGCGGTGTTGCCACCCGGCCGGAGCCGCTCGCTGCTGCTGCTCGTGTGCCAGGAGCCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTGGGGGTGAGCGCACCGGGTTCGGGCTGGCTC--GGGGTGGAGCTGAAACTGGGCGGA-GCCTGGAGCCGGGGCGGAAATGGGTGGGGTTTCCAGG---AGGGGCGGGGCCTGGGGCAAAGGCGGGGTCAGAGCAAGGAAGGGCAAGGGGCCTGGGAAG------------GGGAGTGAG-------GAGGCTGGACGTAG---AGTCAAGATAAAACATGAGGCTGGGACGTAGTGGAGGCTAAGGGCTGGAGTAGTCTGAGGACATCAACAGAACATGGACAAGAAGGGTCTGGAGGAGCAGCCAGAACGATGA------------TG-GGGCAAGGAACCACCTGGACTGGGTCTCCATGGGCGGGGTCGTGGCTTAGGGCAGGGACAGGTGTAGGGAGAGGG-GTGAGTCCAGGGCGTGGACGTGCGTGGG-TCCACAGGCAGGAACGATGGCCGCTCGTGGACTAGGAGCGAGCGGAAAACTCGGCCAGGGGCGTGGCTCGGGGTGGGAAGTGGGTGGGGCGTGGGGAGGCGTGGCCTGACGGCGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGAGAGCGCAGGGCGGCGGCGCTGAGGTGAG-----------------AGGGAAGAAG------TTGGTGGGACCTCTAGGAAGCCGGTTTCCCCTCCCTGGGCCTGTCTCATCTGAGAAGTGGGCAGACA-----------------------CCAACCACCAGCCTGGAACAGAACC--AGTGTTGAATGGAGTCAAGCACGCCCTCG-TCGAG---CGTTTGTAGCTCCCAGACGAGGTGGATCCTCTTCCAGGACGC-TCCTTCTT--------TTCCCTGTTCCCTGTCT--AGGCCCTGGGTTTCACTTTGGAGA--TGCTACT-------------------------CCTCCCTA-GT---GGGATTTCTCCCCAACTCTTTGAACCTGTTTGCTCCCTTTGTGCCT-------CA--GTGTGTCTCGTTCTGGGCCCCGAATTTCCCCCTCCCTGGATCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20152562 2392 - 122678785 AGTCTGAGGGAGGAGGGGCTGGGG---TCTGACTCCTGGG-TCTGAGGCAGTA-GGGGCTGA---GTCT------TCTGGATTATTCTCCTTCTCCCCC-ACAGAGCAGAGGAAACGTTATTCCACTGTGGTTATGGCAGATGTTTCGCAGTATCTAGTCAATGTGAGT-TGGGGTCTGCGTGGCCACAGGGAGTCTTGTGGGAGGAAAGGCAGGCAGGCCTGGGAAGATGGAAGTGTTGAAAGCAGTTGGGTCTCCAAGCAGAAAGAAGCTAGGAAACTGAGTTTGGTCATATGCAAGATGGGTTTC---TGCCTTTGCTCAGAAGTGGGTATTGAGTAGAAG---TCAACTCCACTTGAAT---CCAAGTTTTCCTCCAGACCAGCTCTTGTGCTGGACAGTCAGGCCATGGGGACAA--TGTTACATATCCTCGTACGAGTACAGGTCAAA----------------------GGgtgccaggtgctctaatggaggcag--------------------------aggtgcttagaagggactagatataaccaa-----------tgccttcaaggagcctccagtcgtgctgggaggacaggtcccagtgctagtcactccgatgaaagcaaaacaaaggaaactcaggggccccataggtggagcaggtgccccataagtggagcaggtgat-aaggaaggctttcccaaggaggtgtgtttagtctcgggctggaaggctg---aTGCCAGGGG-ATGCTGAGCCCAGCTGACATTAATCTGGGACTCACTGCTTTCTCGGCACCGCCGTGCCAGCACCTGGTGACATTCTGCCTGGGTGAAGAGGATGGCGTGCACACTGTGGAGGATGCCTCCCGGAAGCTGGCCGTCATGGACAATCAGGGCCGCGTCTGGGCCCAAGAGATGCTGCTGCGCGTGTCTCCGGACCACGTCACGCTGCTTGACCCCATCTCCAAGGTGCCAGGGGACACGTGGGTGGAAAGCGCAGTTGGCCTGAGCGAGCAGGGGCATGGAGAGCTTGACCCtccggacgtctaagtgtgaatattggcctctgcatgtccttcctttgggaactttggcaagagatctccacccccattttgagtattattagtctcccctattaaacaggggtgttatccttaaccccctaacctcgcagggttgcctgtgCAGTGCCAGCGTACAAGCTGTCACTGCTGTCACCATTT--TAGTACCACTGGTTCCAGGCCTCAGTTTACCC-GCCATCCCACCCTGCAGGAGGAGTTGGAGTCGTACCCGCTGGGGGCCATCGTGCGCTGCGACGTGGTGATGCTGCCAGGCCGGAGCCGCTCGCTGCTGCTGCTCGTGTGCCAGGAGCCTGAGCGCACGCAGCCGGATGTGCACTTCTTCCAGGGCTTGCGTCTGGGGGTGAGCGGGCCTGGTCAGGGGAGCCACCGGGGACAGGGCTGAGACCCTGTGGGTTCCCGGAGCGAAGCTAGAGCTAGGCGGGGCCTCTGGGGATGGGGGCGGGGCCTGGGGCAGAGGCGGG-TCTGGTCACCGGAGGAGGCGGGGCCTGGAGAG-AAGTTCGGGAAGGGAAAGGGGTTTT--GAGGTCAGGACTGACCTGGTGGAGGGCGAGACTAAGGTCCCGG-----------------------------GCGGGACGT-AACAGCACATGGGGCAG-AGGGTCT--GGGAGCAGCCACAACCAGAGGCGAGTATGGTCTAGGGGCAAGGCCACATCAGGACCCGGCCTC--TGGGCATGGTCGAGGCCCAGGGCAGGGGCAGAAGTAGGGTGAGGGTGTGAGTTCAGAGAGTGGCGGTGCATGGGCACCGTGAGCCTGAGCGCTGGCTGGAGGGGTTCTGGCGCCCAGCCCAGAAATCGATCCTTGGGGGGACCG-TGGCCAGAGGTAGGTGGGGAGTGGG--GGCCTGGCCTGATGGCATGATTGGCAGGCGGAGCTGATCCGAGAAGACGTCCAGGGGGCTCTGCACGACTACCGGTCTGGCCGCGGGGAGCGCAGGCCCGCAGCGCTCAGGTAAGGGCGCTGGGCTGGAAGCAGGGGAGAAGAGAGGCTGGGTGGGGTGTCTGGGAGGCCAGCCTCCCCTCTCTGGGCCT-------------------CCGTCCCCTCTCCTTCGGACAGTGAGCTGATGC-CCCTACCCTAGAACAGCACA--AGTTTTGAAGCCCGCCAA--ACAGCCTGGTTCGAGTCCTG-CCGTACC-CCCAGACATCTGCACCCGATCTCCAAGACCA-CTTTTCCTAATTCTGGTCCTCGGTTTCTCCTCCTTCGGGCCTCAGTTTCCCTCTGGAGAGGTGTTCCC-------------------------CTTCCCCATATCTCCGGTTTTTTCCTCCCCTGG--------GTCTGATTCCGCTGGGCCG-------CA--GTGTCTC-CGTTTTAAGACCGACTTTATCCCCTGCCCTGTCCCCC--GTGGACTCAAGCT--GTCTCCCTTTGTCCCACCACAGGGCCACGCAAGAGGAGTTGCAGCGCCACCCCTCACC i canFam3.chr1 C 0 C 0 a score=1867958.000000 s hg38.chr19_GL949747v2_alt 726468 714 + 729520 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGCCCGTCAGTCCGCGCAGTGATCAGCACCGTAGAGCGGGGCGCGGGCCGCGGACGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGGCCTGAGCCGGTGGGGACCTCGAGCAACGCTGACTCGGCCTCCCCGGACCTGGGTCCCCGGGGTCCTGACCTGGCGGTTCTGCAGGCGGAGCGGGAAGTGGTGAGCCGCTAAGGAAGGGGTCTGggggcagggccaggcgactggaggcggggctag-ggcgtgga-------------agggcggggccggctgcgggacgggCGTTC--------TCTGGTCAGACTTCTGCGTTATGGAAGAGGGGCT-GGGTCGGGGGCGGGGCTTGG--TTGTGGGGCGTGGCCAGGTGTTTGGGGCGTGGCCTGATCTGGGGAAGTGTATAGGTGCTCAGGTTCAGGGCTTCGACGGGGAT--GGTTTTGGAACTCGGGAGCCCTGAG-------------------------------------------------CGTCCCCCTC-----------------------------------CTCTGTCCCCTAGGACATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTTGTATCGAGGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTGGAGCACCGGGAACGCGGCCGCAGGAGCCGGCGCCGGGCGGCTGGGGGTAAGGGGCACCCTGGCGTGGGATCTGAA-CCCCCTCCCGATCTCTTCCAAATGTCCCCGCTCTCCCCAGGCTCTCCCCTCC s panTro4.chr19 59993935 718 + 63644993 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGCCCGTCAGTCCGCGCAGTGATCAGCACCGTAGAGCGGGGCGCGGGCCGCGGACGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGGCCTGAGCCGGTGGGGACCTCGAGCAACGCTGACTCGGCCTCCCCGGACCTGGGTCCCCGGGGTCCTGACCTGGCGGTTCTGCAggcggagcgagaagtggtgagccgcgaaggaaggggtctgggggcgggaccaggcgactggaggcggggctag-ggcgtgga-------------agggcggggccggctgcgggacgggCGTTCTCTG----TCTGGTCAGACTTGTGCGTTATAGAAGAGGGGCT-GGGTCGGGGGCGGGGCTTGG--TTGTGGGGCGTGGCCAGGTGTTTGGGGCGTGGCCTGATCTGGGGAAGTGTATAGGTGCTCAGGTTCAGGGCTTCGACGGGGAT--GGTTTTGGAACTCGGGAGCCCTGAG-------------------------------------------------CTTCCCCCTC-----------------------------------CTCTGTCCCCTAGGACATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTTGTATCGAGGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTGGAGCACAGGGAACGCGGCCGCAGGACCCGGCGCCGGGCGGCTGGGGGTAAGGGGCATCCTCGCGTGGCATCTGAA-CCCCCTCCCGATCTCTTCCAAATGTCCCCGCTCTCCCCAGGCTCTCCCCTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56949164 722 + 60714840 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGTCCGTCAGTCCGCGCAGTGATCAGCACCGTAGAGCGGGGCGCGGGCCGCGGACGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGGCCTGAGCCGGTGGGGACCTCGAGCAACGCTGACTGGGCCTCCCCAGACCTGGGTCCCCGGGGTCCTGACCTGGCGGTTCTGCAggcggagcgggaagtggtgagccgcgaaggaacgggtctgggggcggggccaggcgactggaggcggggctag-ggcgtgga-------------agggcggggccggctgcgggacgggAGTTCTCTGTCAATCTGGTCAGACTTCTGCCTTATGGAGGAGGGGCT-GGGTCGGGGGCGTGGCTTGG--TTGTGGGGCGTGGCCATGTGTTTGGGGCGTGGCCTGATCTGGGGACGTGTGTAGGTGCTCAGGTTCAGGGCTTCGACGGGGAT--GGTTTTGGAACTCGGGAGCCCTGAG-------------------------------------------------CGTTCCCCTC-----------------------------------CTCTGTCCCCCAGGACATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTTGTATCGAGGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTAGAGCACCGGGAACGCGGCCGCAGGACACGGCGCCGGGCGGCTGGGGGTAAGGGGCACCCTCGCGTGGGATCTGAA-CCCCCTCCCGATCTCTTCCAAATGTCCCCGCTCTCCCCAGGCTCTCCCCTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103417557 723 - 106955855 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGCCCATCAGTCCGCGCAGTGATCAGCATCTTAGAGCGGGGCGCGGGCCGCGGACGACCCCAGGCGAAGCCCATTCCCGAGGCAGACGAGGCGCAGAGGCCTGAGCCGGTGGGGACCTCGAGCAACTCTGACTCGGCCTCCCCGGAACTGGGTCCCCGGGGTCCCGACCTGGCGGTTCTGCAGGCGGAGCGGGAAGTGGTGAGCCGCGAGGGAAGGGGTCTGggggcggggccaggcgactgaaggcggggctag-ggcgtgga-------------agggcggggccggctgcgggacgggAGTTCTCTGTCAATCTGGTCAGACTTCTGCGTTATGGAGGAGGGGCTGGGGTCGGGAGCGGGGCTTGG--TTGTGGGGCGTGGCCAGGTGTTTGGGGCGTGGCCTGATCTGGGGACGTGTGTAGGTGCTCAGGTTCAGGACTTTGACGGGGAT--GGTTCTGGAACTCGGGACCCCTGAG-------------------------------------------------CGTCCGCCTC-----------------------------------CTCTGTCCCCCAGGACATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTTGTATCAAGGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTGGAGCACCGGGAACGCGGCCGCAGAACCCGGCGCCGGGCGGCTGGGGGTAAGGAGCACCCCTGCGTGGTATCTGAA-CCCCTTCCCGATCTCTTCCAAATGTCCCCGCTCTCCCCAGGGTCTCCCCTCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55885154 714 + 59248254 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGCCCGTCCGTCCGCGCAGTGATCAGCACCGTGGAGCGGGGCGCAGGCCGCGGGCGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGACGCAGAGGCCTGGGCCCGCGGGGACCTCGAGCAGCGCTGACCCGGCCTCCCCGGACCTGGGTCCCCGGGGTCCTGACCTGGCGGCTCTGCAGGCGGAGCGGGAAGTGGTGAGCCGCGCGGGAAAggggctgggggcggggccagacgactggaggcggggctag-ggcgtgg--------------ggGGCGGGGCCAGCTGCGGGATAGGAGTTCTCCGTCAATCTGGTCAGACTTCGGCGTTATGGAGGCGGGGAA-------GGGGCGGGGCTTGG--TTGTAGGGCGTGGCCAGGTGTTTGGGGCGGGGCCTG-TCTGGAGACGTGTCTAGGTGCTCAGGTTCAGGGCTTCGACGGGGAT--GGTTTTGGAACTCGGGAGCCCTGAG-------------------------------------------------CGTCCCCCTC-----------------------------------CTCTGTCCCCCAGGACATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTCGTATCGAGGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTGGAGCACCGGGAACGCGGCCGCAGGACCCGGCGCCGAGCGGCTGGGGGTAAGG-GCACCCCCGCGTGGGATCTGAACCCCCCTCCCGATCACTTCCAGATGCCCCCCCTCTCCCCAGGGTCTCCCCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47973666 715 + 51301725 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGTCCGTCCGTCCGCGCAGTGATCAGCACCGTGGAGCGGGGCGCAGGCCGCGGGCGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGGCCTGGGCCTGCGGGGACCTCGAGCAGCGCTGACCCGGCCTCCCCGGACCTGGGTCCCCGGGGTCCTGACCTGGCGGTTCTGCAGGCGGAGCGGGAAGTGGTGAGCCgcgcgggaaaggggctgggggcggggccagatggctggaggcggggctgg-ggcgtgga-------------agggcggggtcagctgcgggATGGGAGTTCTCCGTCAATCTGGTCAGACTTCGGTGTTATGGAggaggggcg-------ggggcggggcttgg--ttgtagggcgtggccaggtgtgtggggcggggcctg-tctggggACGTGTCTAGGTGCTCAGGTTCAGGGCTTCGACGGGGAT--GGTTTTGGAACTCGGGAGCCCTGAG-------------------------------------------------CTTCCccctc-----------------------------------ctctgtcccccaggaCATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTCGTATCGAGGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTGGAGCATCGGGAACGCGGCCGCAGGACCCGGCGCCGAGCGGCTGGGGGTAAGG-GCACCCCCGCGTGGGATCTGAAcccccctcccgatcacttccagatgccccccctctccccagggtctcccctcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47673087 714 + 50890351 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGTCCGTCCGTCCGCGCAGTGATCAGCACCGTGGAGCGGGGCGCGGGCCGCGGGCGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGGCCTGGGCCGGCGGGGACCTCGAACAGCGCTGACCCGGCCTCCCCGGACCTGGGTCCCCGGGGTCCTGACCTGGCGGTTCTGCAggcggagcgggaagtggtgagccgcgcggggaaggggctgggggcggggccagacgactggaggcggggctag-ggcgtgga-------------agggcggggcCAGCTGCGGGATGGGAGTTCTCCGTCAATCTGGCCAGATTTCTGCGTTATGGAGGCGGGGCG-------GGGGCGGGGCTTGG--TTGTAGGGCGTGGCCAGGTGTTTGGGGCGGGTCCTG-TCTGGGGACGTGTCTAGGTGCTCAGGTTCAGGGCTTCGACGGGGAT--GGTTTTGGAACTCGGGAGCCCTGAG-------------------------------------------------CGTCCCCCTC-----------------------------------CTCTGTCCCCCAGGACATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTCGTATCGACGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTGGAGCACCGGGAACGCGGCCGCAGGACCCGGCGCCGAGCGGCTGGGGGTAAGG-GCACCCCCGCGTGGGATCTGAACCCCCCTCCCGATCACTTCCAGATG-CCCCCGTCTCCCCAGGGTCTCCCCTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 81699 709 + 138250 CGCCGCGGAGACCCCGCCCCTGCAGCGCCGCCCGTCTGTTCGCGCAGTGATCAACCCCGTGGAGCGGGGCACGGACCGCGGGCGTCTCCAGGCGGAGCCCATTCCCGAGGTGGAGGAGGCGCAGAGGCCTGGCCCTGCGGGGACCTCGAGCAGCGCTGACCCGGCCTCCCCGGACCTGGGTCCCCGGGGTCCAGACCTGGCGGGTCTACAGGCGGAGCGGGAAGTGGTGAGCATCGTGGAATGGGATCTGGGGGCGGGGCAAGACGGCTGGAGGCGGGGCTAG-GACGTGGA-------------AGGGCGGGGCCGGCTGCGGGACTTGAGTTCTCTGTCAATCGGATCAGACTTCTGCGTTATGGAGGAGGGGCT-GTGGTAGGGGCGTGGCTTGG--CTGTAGGGCGTGGCCAGCTGTTTGGGGCGTGGTCTG------------GTCTAGGTGCGCAGGTTCAGGGCTTCGATGGAAAT--GGTTGTGGAACTCAGAAGCCC-AAG-------------------------------------------------CGTCCCCCTT-----------------------------------CTCTGTCTCCCAGGACATACTGAATCACGTCTTTGACGACGTGGAGAACTTTGTACAGAAGCTGCAGAAATCAGCGGAGGCGGCCAGGGTGCTGGAGCACCGGGAACGCGGCCGCAGGACCCGGCGCCGGGAGGCTGGGGGTAAGGGACGCCCCCGCCTGAGATCTGAA-CCCCCTCGCGATAACTTCCAAATGTCCCCCATCTCCCCAGCGTCTCCCCTCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20154954 763 - 122678785 GGCGGCCGAGACCCCTCCGCTGCAGCGCAGCCCTTCGGTCCGCGCCGTCATCAGCATAGGGGAG------GCGGGCCGGGGGCGACCTCGGGCGGGGCCCATCCCCGAGGTGGAGGAGCCCCAGAGACCCGGGCAGGAAGGAACCTCAGGGAACGCCAACCCAGCCTCCCCGGACCTGGGCCCCCGGGGGCCGGACCTGGCCAGTCTGCAGGCGGAGCGGGACGTGGTGA-------------------GGGGGCGGGGCCAAG-GCATGGAGGCGGGGCCGGCGGTGGGGAGTCCCAGCTTCAGGGGGTGGGGCCTGATGGGGTGTGGGAGT--------------GTCAGACTTC-------TGGGGGTGTGGCT---------GGCGGTGACTGGAATATGAGGACCCGGCCCGCAGCAGAGGGAACGGCCTGGCCTGGGAGGATATCAGGGCCCTT-GGCTGCGGGTTTTGGGGGTGATGCGGGGCCAGGACTCCACATCCCTGAGTCCCCCTGCTCTGACCCGTGCTCTGTCCTCCGGTTCTGTCCTCCGGCTCCgtcccccacactgtcccccacactgtcccccacgctgtcccTCGCCCTGACCCCCAGGACATCCTGAACCACGTGTTCGACGATGTGGAGAGTTTCGTCTCGAAGCTGCAGAAGTCAGCAGAGGCAGCCCGGGTGCTGGAGCACCGGGAGCGTGGCCGCAGGACCCGGCGCCGGGCAGCTGGGGGTGAGAGGCTCCCCAG-GGGGATCCTGAA-----CATCCAGTCCCTCCCAAATATCCTCGCTCTCCCTAGGGTCCCCCCACA i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60727285 697 + 64156825 M a score=7526905.000000 s hg38.chr19_GL949747v2_alt 727182 2329 + 729520 -CGCCACTTGCCAGGGCTGACCTCACCGCCAT-----CTTAACCGGGTGTCCAC----CTCTCTCTGCCTGCCTGGTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCTGCTCCCCTCAGAGGGCTTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGC---CCGCCCCTGGGCC-GGGGCGCGGGCACGACGAACCTGTCCcgtcccc---gcacccacgccaaccacctccctccccacgccccaggcccGGCTGCGCGGCAACATCGCCGACCCCTCCTCTCCGGAGCTGTTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGCCCTCGGGC-CCCCCTGCAGCGGGAGGAATCG-GGTTCGACTTGTAGAAGGTGTGGCGGCACAGCCTG-CCCCTCCTGCTCCCCTGACAGATTGTGAACACGTCGGGGGGGCCGGAGTTCGCGAGCAGTGTGCGGCGGCCGCATCTGACATCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCGGGGCTGGGAGGCAGGG-GGCATGGTGATTGGAGGAGCATAA-GGCG---------------------------------------CTGGGAGGTGGGTGGCATGATGATTGGAAAATAGGACTAGGAGAGTAGGGAGGGGTTAGAGGCGTGGCTTAGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGAGGAAAGGCCAGGAATTAACGTGAAGGAAAGATTTAAGACCACCAGACCAATCGGATTGAAAGAAAAGg-ggggcttaaaggaatagaggggctaggggctacggggcaggggcggggctacgcgaaggggcggggctTCTGGAAGGTTTGGTCTATAACTTTGGTGATGGGACAGAGTCTGTGCAC-TGCGGGCTGGCAGTTCCGCAGGGAAAGGGTCAGAACCTGAAACCGACCTTACGGA---AAACCTGATTTGG---AATC--AGGTGAGATTTAGAGGCTGGATAAGGCAAtttttttcc--------agagagagagatggatg--------------gggtctcaatattttgcccaggctggtctggaactcctggcctcaagcgatcctccca-------tcttggcctcccaaaatgctgggattacaggcgtgagccaccgtgcccggtcTAGAAATATAAATTGCTGTT-GAGTTGGGCTTAGAGCTACCGGCAGGACTTGGTGAAAAGTGGCGGGGCTAGAATCGTTGGAATACAGCGAGCTTTAGGGGAAAACTTAGTGAAGTTAATGCAGGAACGAAGTTGGGGG------CTGTATCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCCGCAGGCTGGAGCTGTCCCCGGAGGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTCACTGACCCGCAGAGCCGCGCCTGGGAGGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGA---------------------------------------CCCAAGCGACACAGCAGGGCCGAGGCTGGGAA-------------------------------------------------GTCC-----GGGGGCGCGGCCGGTCCGCCTGGCCCCGCCTGACCCGAC---TGTCTTACTTCCTACAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCAAGGAGGGG-TGCGTCCCGGGGGCTCCCGATGCTGACTCCGCCCCCTTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTCTTCTCAGGTGGGTGAGATGGTGAT-ggggcgggccggggctgggagagagggaggagcagggtggga-gggggcgggACCCAGACTTctggggctaagggagttgggaatggagacccggattcctgggcctaagggaggaagggggctgggagtGGGTAAAGTCTGAGAGGTTGGATCCCTGGATCCCCAAAAGGCTGGAAGAAGCCAGTTTGTTTTCCCAGGGCCTGGGAAGCACCATGC----CTGGGCTCCCTAGGAGGACAGAGCCCTGGATATTGGAGGGGAGAGGCTGGGGAATTGGACCTTTGGGTTTTGAAGAAGAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCCGAGAGGGGTAAAGGCTGGACGATTAAACTCTTGGTTTTCCAGAGGCTCTAATGC-AATTGTCTAAGTCGCTGCTGGGTGTCGGACT-----------GGGTTAAAAGGTTTGAGGGTTAAAAGGATAAGA s panTro4.chr19 59994653 2322 + 63644993 -CGCCACTTGCCAGGGCTGACCTCACCACCAT-----CTTAACCGGGTGTCCAC----CTCTCTCTGCCTGTCTGGTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCTGCTCCCCTCAGAGGGCCTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCCTGGGCC-GGGGCGCGGGCACGGCGAACTTGCCCCGTCCCC---GCACCCACGCCAACCACCTCCCTCCCCACGCCCCAGGCCCGGCTGCGCGGCAACATCGCCGACCCCTCCTCTCCGGAGCTGTTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGACCCTCGGGC-CCCCTTGCAGCGGGAGGAATCG-GGTTCGACTTGTAGAAGGTGTGGCGGCACAGCCTG-CCCCTCCTGCTCCCCTGACAGATTGTGAACACGTCGGGGGGGCCGGAGTTCGCGAGCAGTGTTAGGCGGCCGCACCTGACGTCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGTTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCGGGGCTGGGAGGCAGGG-GGCATGGTGATTGGAGGAGCATAA-GGCG---------------------------------------CTGGGAGGTGGGTGGCATGATGATTGGAAAATAGGACTAGGAGGGGAGGGACGGGTTAGAGGCGTGGCTTAGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGAGGAAAGGCCAGGAATTAACGTGAAGGAAAGATTTAAGACCACTAGACCAATCGGATTGAAAGAAAAGG-GGGGCTTAAAGGAATAG-------AGGGGCTACGGGGCAGGGGCGGGGCTACGCGAAGGGGCGGGGCTTCTGGAAGGTTTGGTCTATAACTTTGGTGATGGGACAGAGTCTGTGCAC-TGCGGGCTGGGAGTTCCGCAGGGAAAGGGTCAGAACCTGAAACCGACCTTATGGA---AAACCTGATTTGG---AATC--AGGTGAGATTTAGAGGCTGGATAAGGCAATTTTTTTCC--------AGAGAGagagatggatt--------------gggtctcaatattttgcccaggctggtctggaactcctggcctcaagcgatcctccca-------tcttggcctcccaaaatgctgggattacaggcgtgagccacggtgcccggtcTAGAAATATAAATTGCTGTT-GAGTTGGGCTTAGAGCTACCGGCAGGACTTGGTGAAAAGTGGCGGGGCTAGAATCGTTGGGATACAGCGAGCTTTAGGGGAAAACTTAGTGAAATTAATGACAGAACGAAGTTGGGGG------CTGTACCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCCGCAGGCTGGAGCTGCCCCCGGAAGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTCACTGACCCGCAGAGCCGCGCCTGGGAGGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCTGGCAGGTGA---------------------------------------CCCAAGCGACACAGCAGGGCCGAGGCTGGGAA-------------------------------------------------GTCC-----GGGGGCGCGGCCGGTCCGCCTGGCCCCGCCTGACCCGAC---TCTCTTACTTCCTACAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCCAGGAGGGG-TGCGTCCCGGGGGCTCCCGATGCTGACTCCGCCCCCTTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTTTTCTCAGGTGGGTGAGATGGTGAT-GGGGCGGGCCGGGGCTGGGAGAGAGGGAGGAGCagggaggga-gggggtgggacccagacttctggggccaagggaggagggaatggagacccggattcccgggcctaagggaggaaaggggctgggagtGGGTAAAGTCTGAGAGGTTGGATCCCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGTTTTCCCAGGGCCTGGGAAGCACCATGC----CTGGGCTCCCTAGGAGGACAGAGCCCTGGATATTGGAGGGGAGAGGCTGGGGAATTGGACCTTTGGGTTTTGAAGAAGAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGATCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCCGAGAGGGGTAAAGGCTGGACGATTAAACTCTTGGTTTTCCAGAGGCTCTAATGC-AATTGTCTAAGTCGCTGCTGGGTGTTGGACT-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56949886 2325 + 60714840 -CGCCACTTGCCAGGGCTGACCTCACCGCCAT-----CTTAACCGGGTGTCCAC--CTCTCTCTCTGCCTGCCTGGTGCTGGCCCCGCGTCCCCGTCGCCGCGCC--CGTCTGCACCCCTCAGAGGGCCTGCTGACGCTGCGGGCCAAGCCGCCTTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCAAGGGCC-GGGGCGCGGGCACGGCGAACCAGCCCCGTCCCC---GCACCCACGCCAACCACATCCCTCCCCACGCCCCAGGCCCGGCTGCGCGGCAACATCGCCGACCCCTCCTCTCCGGAGCTGTTGCACTTCCTTCTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGCCCTCGGGC-CCCCCTGCAGCGGGAGGACTCG-TGTTCGACTCGTAGAAGGTATGACGGCAC--CCTGCCCCCTCCTGCTCCCCTGACAGATTGTGAACACGTCGGGGGGGCCGGAGTTCGCGAGCAGCGTGCGGCGGCCGCACCTGACATCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCATGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGACGGGGCTGGGAGGCAGGG-GGCGTGGTGATTGGAGGAGCATAA-GGGG---------------------------------------CTGGGAGGTGGGTGGCATGATGATTGGAAAATAGGACTAGGAGGGAAGGGAAGGGTTAGAGGCGTGGCTTAGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGAAGAAAGGCCAGGAATTAACGTGAAGGAAAGATTTAAGACCACCAGACCAATCAGATTGAAAGAAATGGTGGGGCTTAAAGGAATAG-------AGGGGCTACGGGGCAGGGGCGGGGCTACGCGAAGGGGCGGGGCTTCTGGAAGGTTTGGTCTGTAACTTTGGTGATGGGACAGAGTCTATGCAC-TGGGGGCTGGGAGTTCCGCAGGGAAAGGGTCAGAACCTGAAACCGACCTTATGGA---AAACCTGATTTGG---AATC--AGGTGAGATTTAGAGGCTGGATAAGGCAAtttttttcc--------agagagagagatggatg--------------gggtctcagtattttgcccaggctggtctggaactcctggcctcaagcgatcctccca-------tcttggcctcccaaaatgctgggattacaggcgtgagccaccgtgcccggtcTAGAAATATAAATTGCTGTT-GAATTGGGCTTAGAGCTACTGGCAGGACTTGGTGAAAAGTGGCGGGGCTAGAATCGTTGGGATACAGCGAGCTTTAGGGGAAAACTTCGTGAAGTTAATGACAGAACTAAGTTGGGGG------CTGTACCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCCGCAGGCTGGAGCTGCCTCCGGACGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTCACTGACCCGCAGGGCCGCGCCTGGGAGGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGA---------------------------------------CCCAAGTGACACAGCAGGGCCTAGGCTGGGAA-------------------------------------------------GTCC-----GGGGGCGCGGCCGGTACGCCTGGCCCCGCCTGACCCGAC---TCTCTTACTTCCTACAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGAAAG-GGGGTCCAGGAGGGG-TGCGTCCTGGGGGCTCCCGGTGCTGACTCCGCCCCCTTTTTTTCTGTGTTTTCCCT----TCTTCCTGGCTCTTCTCAGGTGGGTGAGATGGTGAT-GGGGTGGGCTGGGGCCGGGAGAGAGGGAGGAGCAGGgagggaggggggagggacctagacttctggggccaagggaggagggaatggagacccgggttcccgggcctaagggaggaaaggggctgggagtGGGTAAAGTCTGAAAGGTTGGATCCCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGTTTTCCTAGGGCCTGGGAAGCACTATGTCTGGCTGGGCTCCCTATGAGGACAGAGCCCTGGATATTGGAGGGGAGAGGCTGGGGGATTGGATCTTTGGGTTTTGAAGAAGAGCCCAAATC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGTGCAAGTTTCTGGGAAAGTTAGGAAGTAATAGTATCTCTGGGCCCTCAAGAGGGGTAAAGGCTGGACGATTAAAGTCTTGGTTTTCCAGAGGCTCTAATGC-AATTGTCTAAGTCGCTGCTGGGTGTCGGACA-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103418280 2326 - 106955855 -CGCCACTTGCCAGGGCTGACCTCACCGCCAT-----CTTAACCGGGTGTCCACCTCTCTCTCTCTGCCTGCCTGGTGCGGGCCCCGCGTCCCCATCGCCGCGCC--CGTCTGACCCCCTCAGAGGGCCTGCTGACGCTGCGAGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCCTGGGCC-AGGGCGCGGGCACGGCGAACCTGccccgtcccc---gcacccacgccaaccacctccctccccacgccccaggcccGGCTGCGCGGTAACATCGCCGACCCCTCCTCTCCGGAGCTGTTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGCCCTCGGGC-CCCCCTGCAGCGGGAGGAATCG-GGTTCGACTTGTAGAAGGTGTGACGGCACAGCCTGCCCCCTCCTGCTCCCCTGACAGATTGTGAACACGTTGGGGGGGCCCGAGTTCGCGAGCAGCGTGCGGCAGCCGCACCTGACATCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCGGGGCTAGGAGCCAGGG-GGCGTGGTGATTGGAGGAGCATAAGGGGG---------------------------------------CTGGGAGGTGGGTAGCATGATGATTGGAAAATAGGACTAGGAGGGTAGGGACGGGTTAGAGGCGTGGCTTAGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGAGGAAAGGCCAGGAATTAACGTGAAGGAAAGATTTAAGACCACCAGACCAATCAGATTGAAAGAAAAGGTAGGGTTTAAAGGAATAG-------aggggctacggggcaggggcagggctacgcaaaggggcggggcTTCTGGAAGGTTTGGTCTATAACTTTGGTGATGGGACAGAGTCTGTGCAC-TGGGGGCTGGGAGTTCCGCAGGGAAAGGGTCAGAACCTGAAACCGACCTTATGGA---AAACCTGATGTGG---AATC--AGGTGAGATTTAGAGACTGGATAAGGCAAtttttttcc--------agagagaaaggtggatg--------------gcgtctcaatatgttgcccaggctggtctggaactcctggcctcaagcgatcctccca-------tcttggcctcccaaaatgctgggattacaggcgtgagccaccgcgcccggcGTAGAAATATAAATTGCTGTT-GAGTTGGGCTTAGAGCTACCGGCAGGACTTGGTGAAAAGTGGCGGGGCTAGAATCGTTGGGATACAGCGAGCTTTAGGGGAAAACTTAGTGAAGTTAATGACAGAACTAAGTTGGGGG------CTGTACCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCCGCAGGCTGGAGCTACCCCCGGAAGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTCACTGACCCGCAGGGCCGCGCCTGGGAGGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGA---------------------------------------CCCAAGCGACACAGCAGGGCCAAGCCTGGGAA-------------------------------------------------GTCC-----GGGGGCG-GGCCGGTCCGCCTGGCCCCGCCTGACCCGAC---TCTCTTACTTCCTACAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCCAGTAGGGG-TGCGTCCCGGGGGCTCCCGGTGCTGACTCCGCCCCCTTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTCTTCTCAGGTGGGTGAGATGGTGAT-GGGGCGGGCCGGGGCCGGGAGAGAGGGAGGAGCagggaggga-gggggcgggacccagacttctggggccaagggaggagggaatggagatcggggttcccgggcctaggggaggaaaggggctgggagtGGGTAAAGTCTGAGAGGTTGGATCCCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGTTTTCCCGGGGCCTGGGAAGCACCGTGC----CTGGGCTCCCTGTGAGGACAGAGCCCTGGATATTGGAGGGGGGAGGCTGGGGAATTGGACCTTTGGGTTTTGAAGAATAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAATTTCTGGGAAAGTTAGGAAGTGGTAGTA--CCTGGGTCCCCGAGAGGGGTCAAGGCTGGACGATTAAACTCTTGGTTTTCCAGAGGCTGTAATGC-AATTGTCTAAGTCGCTGCTGGGTGTCGGACT-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60727982 2367 + 64156825 -CGCCACTTACCAGGGCTGACCTCACAGCCAT-----CTTAACCGGGTGTCCAC--CTCTCTCTCTGCCTGCCTGGTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCGGC-CCCCGCAGAGGGCCTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCCTGGGCC-GGGGCGCGGGCACGGCGAAGCTGCCCCGTCCCC---GCACCCACGCCAACCATCTCCCTCCCCACGCCCCAGGCCCGGCTGCGCGGCAACATCGCCGACCCCTCCTCCCCGGAGCTGCTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGTCCTCGGGC-CCCCCTGCGGCGGGAGGAATCG--GTTCGACTTGCAGACGGTGTGACGGCACGGCCTGCCCCCTCCCGCTCCCCTGACAGATTGTGAACACGTCGGGGGGGCCCGAGTTCGCGAGCAGCGTGCGGCAGCCGCACCTGACGTCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCGGGACTGGGAGGCGGGG-GGCGTGGTGATTGGAGGAGCTTAA--GGG---------------------------------------CTGGGAGATGAGTGGC---ATGATTGGAAAATGAGACTAGGAGGAAAGGGACAGGTTGGAGGCGTGGCTTCGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGCGGAAAGGCCAGAAATTAATATGAAGGAAAGATTTAAGACCAGCAGACCAATCAGATTGAAAGAAAAGGTGGGGCTTAAAGGAATAG-------AGGGGCTACGGGGCAGGAGCGGGGCTACGCGAAGGGGCGGGGCTTCTGGAAAGTTTGGTCTATAACTTTGGCGATGGGACAGAGTCTGTGCAC-TGGGGGCTGGGAGTTTCGTAGGGAAAGGGTCAGAACCTGAAACCGAGCTTAAGGA---AAACCTGATTTGG---AATCAGAGGTGAAATTTAGAGGCTAGATAAGGCAATTTTTTTTC---CAGAGAGAGAGAGAGATGGATGGGCGTGGG--GGGCgggtctcaatatgttgcccaggctggtcttgaactcctggcctcaagcgatccttcca-------tcttggcctcccaaaatgctgggattacaggcgtgagccactgcacccggccTAGAAATATAAATTACTGTT-GGGTTGGGCTTGGAGGTACCGGCAGGACTTGGTGAAAAGTGGCGGGGCTAG----------ATACAGAGAGCTTTAGGGGAAAACTTAGTGAAGTTAATGACAGAGCTCAGCTGGGGG------CTGTACCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCTGCAGGCTGGAGCTGCCCCCGGAAGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTTACTGACCCGCAGGGCCGCGCTTGGGAAGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGAGGCTGAGGCTTTC--------AGGGGAGCAGCCAACTCCCCC-AGCCACACGGC----------------ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------------------------------GGCCCCGCCTGACCCGAC---TCTCTTACTTCCTGCAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCCAGGAGGGG-TGCTTCCCGGGGGCTCCCGGTGTTGACTCCGCCCCCTTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTCTTTTCAGGTGGGTGAGATGGTGAA-GGGGCGGGCCGGGGCCGGGAGAGAGGGAGGAGCagggaggga-gggggcgggatccagacttctggggccaagggaggagggaatggagaccggggtttccgggcctacgggaggaaaggggctgggagtGGGTAAAGTCTGAGAGGTTGGATCTCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGGTTTCTCAGGGCCTGGGAAGCACCATGT----CTGGGCTCCCTACGAGGACAGAGCCCTGGATATTGGAGGGGAGAGGCTGGGGAATTCGACCTTTGGGTTTTGAAGAAGAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCGGAGAGGGGTAAAGGCTGGGTGATTAACCTCTTGGTTTTCCAGACGCTCTAATGC-AATTGTCTAAGTCACTGCTGGGTGTCGGACT-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i rheMac3.chr19 M 697 C 0 s macFas5.chr19 55885868 2368 + 59248254 -CGCCACTTACCAGGGCTGACCTCACAGCCAT-----CTTAACCGGGTGTCCAC--CTCTCTCTCTGCCTGCCTGGTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCGGC-CCCCGCAGAGGGCCTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCCTGGGCC-GGGGCGCGGGCACGGCGAAGCTGccccgtcccc---gcacccacgccaaccacctccctccccacgccccaggcccGGCTGCGCGGCAACATCGCCGACCCCTCCTCCCCGGAGCTGCTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGTCCTCGGGC-CCCCCTGCGGCGGGAGGAATCG--GTTCGACTTGCAGACGGTGTGACGGCACGGCCTGCCCCCTCCCGCTCCCCTGACAGATTGTGAACACGTCGGGGGGGCCCGAGTTCGCGAGCAGCGTGCGGCAGCCGCACCTGACGTCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCGGGACTGGGAGGCGGGG-GGCGTGGTGATTGGAGGAGCTTAA--GGG---------------------------------------CTGGGAGATGAGTGGCATGATGATTGGAAAATGAGACTAGGAGGAAAGGGACAGGTTGGAGGCGTGGCTTCGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGCGGAAAGGCCAGAAATTAATATGAAGGAAAGATTTAAGACCAGCAGACCAATCAGATTGAAAGAAAAGGTGGGGCTTAAAGGAATAG-------AGGGGCTACGGGGCAGGAGCGGGGCTACGCGAAGGGGCGGGGCTTCTGGAAAGTTTGGTCTATAACTTTGGCAATGGGACAGAGTCTGTGCAC-TGGGGGCTGGGAGTTTCGTAGGGAAAGGGTCAGAACCTGAAACCGAGCTTAAGGA---AAACCTGATTTGG---AATCAGAGGTGAAATTTAGAGGCTAGATAAGGCAATTTTTTTTC---CAGAGAGAGAGAGAGATGGATGGGCGTGGG--GGGCgggtctcaatatgttgcccaggctggtcttgaactcctggcctcaagcgatccttcca-------tcttggcctcccaaaatgctgggattacaggcgtgagccactgcacccggccTAGAAATATAAATTACTGTT-GGGTTGGGCTTGGAGGTACCGGCAGGACTTGGTGAAAAGTGGCGGGGCTAG----------ATACAGAGAGCTTTAGGGGAAAACTTAGTGAAGTTAATGACAGAGCTCAGCTGGGGG------CTGTACCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCTGCAGGCTGGAGCTGCCCCCGGAAGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTTACTGACCCGCAGGGCCGCGCTTGGGAAGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGAGGCTGAGGCTTTC--------AGGGGAGCAGCCAGCTCCCCCAAGCGACACGGCAGGGCCGAGGCTGGGAA-------------------------------------------------CTCCGGGGTGGGGGCGTGGCCGGTCCGCCTGGCCCCGCCTGACCCGAC---TCTCTTACTTCCTGCAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCCAGGAGGGG-TGCTTCCCGGGGGCTCCCGGTGTTGACTCCGCCCCCTTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTCTTTTCAGGTGGGTGAGATGGTGAA-GGGGCGGGCCGGGGCCGGGAGAGAGGGAGGAGCagggaggga-gggggcgggatccagacttctggggccaagggaggagggaatggagaccggggtttccgggcctaagggaggaaaggggctgggagtGGGTAAAGTCTGAGAGGTTGGATCTCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGGTTTCTCAGGGCCTGGGAAGCACCATGT----CTGGGCTCCCTACGAGGACAGAGCCCTGGATATTGGAGGGGAGAGGCTGGGGAATTCGACCTTTGGGTTTTGAAGAAGAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCGGAGAGGGGTAAAGGCTGGGTGATTAACCTCTTGGTTTTCCAGACGCTCTAATGC-AATTGTCTAAGTCACTGCTGGGTGTCGGACT-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47974381 2365 + 51301725 -cGCCACTTACCAGGGCTGACCTCACAGCCAT-----CTTAACCGGGTGtccac--ctctctctctgcctgcctggTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCGGC-CCCCGCAGAGGGCCTGCTGACACTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCCTGGGCC-GGGGCGCGGGCACGGCGAAGCTGCCCCGTCCCC---GCACCCACGACAACCACCTCCCTCCCCACGCCCCAGGCCCGGCTGCGCGGCAACATCGCCGACCCCTCCTCCCCGGAGCTGCTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGTCCTCGGGC-CCCCCTGCGGCGGGAGGAATCG--GTTCGACTTGCAGACGGTGTGACTGCACGGCCTGCCCCCTCCCGCTCCCCTGACAGATTGTGAACACGTCgggggggCCCGAGTTAGCGAGCGGCGTGCGGCGGCCGCACCTGACGTCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCGGGACTGGGAGGCGGGG-GGCGTGGTGATTGGAGGAGCTTAA-GGGG---------------------------------------CTGGGAGATGAGTGGCATGATGATTGGAAAATGAGACtaggaggaaagggaaaggtTGGAGGCGTGGCTTCGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGCGGAAAGGCCAGAAATTAATATGAAGGAAAGATTTAAGACCAGCAGACCAATCAGATTGAAAGAAAAGGTGGGGCTTAAAGGAATAG-------AggggctacggggcaggggcggggttacgcgaaggggcggggcTTCTGGAAAGTTTGGTCTATAACTTTGGCGATGGGAC--AGTCTGTGCAC-TGGGGGCTGGGAGTTTCGTAGGGAAAGGGTCAGAACCTGAAGCCGAGCTTAAGGA---AAACCTGATTTGG---ACTCAGAGGTGAAATTTAGAGGCTAGATAAggcaattttttttc---c--agagagagagagatggatgggCGTGGG--GGgcgggtctcaatatgttgcccaggctggtcttgaactcctggcctcaagcgatccttcca-------tcttggcctcccaaaatgctgggattacaggcgtgagccactgcacccggcctagaaatataaattactgTT-GAGTTGGGCTTGGAGGTACCGGCAGGACTTGGTGAAAAGTGGCGGGGCTAG----------ATACAGCGAGCTTTAGGGGAAAACTTAGTGAAGTTAATGACAGAGCTCAGCTGGGGG------CTGTACCAGGATCCCTGAGCtcttggccctggccctggctgcAGGCTGGAGCTGCCCCCGGAAGAGGGCCCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTTACTGACCCACAGGGCCGCGCTTGGGAAGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGAGGCTGAGGCTTTC--------AGGGGAGCAGCCAGCTGCCCCAAGCGACACAGCAGGGCCGAGGCTGGGAA-------------------------------------------------GTCCGGGGTGGGGGCGTGGCCGGTCCGCCTGGCCCCGCCTGACCCGAC---TCTCTTACTTCCTGCAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCCAGGAGGGG-TGCTTCCCGGGGGCTCCCGGTGTTGACTCCGCcccctttttttctgtgtttttccttctgtcttcctgGCTCTTTTCAGGTGGGTGAGATGGTGAa-ggggcgggccggggccgggagagagggaggagcagggaggga-gggggtgggatccagacttctggggccaagggaggagggaatggagACCGGGGTTTCCGGGCCTAAGGGAGGAAAGGGGCTGGGAGTGGGTAAAGTCTGAGAGGTTGGATCTCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGGTTTCTCAGGGCCTGGGAAGCACCATGT----CTGGGCTCCCTACGAGGACAGAGCCCTGGATATTggaggggagaggctggggaATTCGACCTTTGGGTTTTGAAGAAGAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCATAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCGGAGAGGGGTAAAGGCTGGGTGATTAACCTCTTGGTTTTCCAGACACTCAAATGC-AATTGTCTAAGTCACTGCTGGGTGTCGGACT-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47673801 2373 + 50890351 -CGCCACGTACCAGGGCTGACCTCACAGCCAT-----CTTAACCGGGTGTCCAC--CTCTCTCTCTGCCTACCTGGTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCGGC-TCCCGCAGAGGGCCTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCCTGGGCC-GGGACGCGGGCACGGCGAACCTGccccgtcccc---gcacccacgccaaccacctccctccccacgccccaggcccGGCTGCGCGGGAACATCGCCGACCCCTCCTCCCCGGAGCTGCTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGTCCTCCGGC-CCCCGTGCAGCGGGAGGAATCG--GTTCGACTTGCAGACGGTGTGACGGCACGGCCTGCCCCCTCCCGCTCCCCTGACAGATTGTGAACACGTCGGGGGGGCCCGAGTTCGCGAGCAGCGTGCGGCGGCCGCACCTGACGTCGGATGCCGTGGCGCTTCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCAGGACTGGGAGGCGGGG-GGCGTGATGATTGGAGGAGCGTAA-GGGG---------------------------------------CTGGGAGATGGGTGGCCTGATGATTGGAAAATGAGACTAGGAGGGAAGGGACAGGTTAGAGGCGTGGCTTCGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGAGGAAAGGCCAGAAATTAATATGAAGGAAA-ATTTAAGACCAGCAGACCAATCAGATTGAAAGAGAAGGTGGGGCTTAAAGGAATAG-------AGGGGCTACGGGGCAGGGGCGGGGCTACGCGAAGGGGCGGGGCTTCTGGAAAGTTTGGTCTATAACTTTGGAGATGGGACAGAGTCTGTGCAC-TTGGGCCTGGGAGTTTCGTAGGGAAAGGGTCAGAACCTGAAACCGAGCTTAAGGA---AAACCTGATTTGG---AATCAGAGGTGAAATTTAGAGGCTAGATAAGGCAAGTTTTTTCCAGACAGAGAGAGAAAGAGATGGATGGGCGGGGGGTGGGggggtctcaatatgttgcccaggctggtcttgaactcctggcctcaagcgatcctccca-------tcttggcctcccaaaatgctgggattacaggcgtgagccgctgcacccggccTAGAAATATAAGTTACTGTT-GAGTTGGGCTTGGAGGTACCGGCAGGACTTGGTGAAAAGCGGCGGGGCTAG----------ATACAGCGAGCTTTAGGGGAAAACTGAGTTAAGTTAATGACAGAGCTCAGTTGGGGG------CTGTACCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCCGCAGGCTGGAGCTGCCCCCGGAAGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTTACTGACCCGCAGGGCCGCGCTTGGGAAGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGAGGCTGAGGCTTTC--------AGGAGTGCAGCCAGCTCCCCCAAGCGACACAGCAGGGCCGAGGCTGGGAA-------------------------------------------------GTCCGGGGTGGGGGCGGGGCCGGTCCGCCTGGCCCCGCCTGACCCGAC---TCTCTTACTTCCTGCAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCCAGGAGGGG-TGCTTACCGGGGGCTCCCGGTGTTGACTCCGCCCCCTTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTCTTTTCAGGTGGGTGAGATGGTGAA-GGGGCGGGCCGGGGCCGGGAGAGAGGGAGGAGCagggaggga-gggggcgggatccagacttctggggccaagggaggagggaatggagacccgggttcccgggcctaagggaggaaaggggctgggagtGGGTAGAGTCTGAGAGGTTGGATCTCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGGTTTCTCAGGGCCTGGGAAGCACCATGC----CTGGGCTCCCTAGGAGGACAGAGCCCTGGATATCGGAGGGGAGAGGCTGGGGAATTGGACCTTTGGATTTTGAAGAAGAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCCGGGCCCCCGACAGGGGTAAAGGTTGGGTGATTAAACTCTTGGTTTTCCAGACACTCTAATGC-AATTGTCTAAGTCACTGCTGGGTGTCGGACT-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 82408 2327 + 138250 -CGCCGATTGCCAGGGCTGACCTCACGGCCAT-----CT--AACGGGTGTCCAC--CTCTCTCTCTGCCTGTCTGGTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCTGCCGCCCGCAGAGGGCCTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CTgcccccgggccgggggcgcggACACCGCGAACCTGGCCGGTCCCC---GCACCCACGCCAACCACGTCCCTCCCCACGCCCCAGGCCCGGCTGCGCGGCAACATCGCAGACCCCTCCTCCCCGGAGCTGCTGCACTTCCTGTTCGGGCCTCTGCAGATGGTGAG---ACCCGCGCCAGGCCCTCGGGC-TCCCCTGCAGCGGGAGGACTCG-GTTTCGACGTGCAGAAGGTGTGATGGCACGGCCTGCCCCCTCCCGCTCCCCTGACAGATTGTGAACACATCGGGGGGTCCCGAGTTCGCGAGCCGCGTGCGGCGACCGCACCTGACGTCGGAGGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGATCTCGCTGGGGGACTCGTGGACCCGCCCTGGGTGAGGGGCGGGACTGGGAGGCAGGG-GGCGTGGTGATTGGAGGAGCAGAA-GGGGCGGGAGATAGGGGCATGGTGATCCGAGGAGCAGAAGGCACTGGGAGATG-GTGCCATGATGATTGGAAAATGGGACTAGGAGGGAAGGGAAGGGCTAGAGGCGTCGCTTCGTTGAGTAGGGGGGGGGGGTCTTAGGACAAATGTCAAGATTCAATTAGAGGAAAGGCCAGAAATTAACGTGAAGA-------CAAGACCACCAGACCAATCAGATTGAAAGAAAAGGTGGGGCTTAAAAGAACAG-------AGGGGCTACGGGGCACGGACGGGGT--------------------------------ATCTGGAACTTTGGCGATGGGACAGAGTCTCTGCGC-TG-AGTCTGGGAGTTTCGTAGGGAAAGGAGCAGAACATGAATCCGAGCTTAAGGA---AAACCTGATTTGT---AATC--AGGTGAGATTTAGAGGCTGGATAAGGCCAttttttttt---t----ccagatagagacg------------------gagtcccgattccttgcccaggctggtctcgaactcctggtctcaagcgatcctcccatcttggctcttggcctcccaaactgctgggactatagacgtgagccaccgctcccgaccTGGCAGCATAAATTGCTGTT-GAGTTGGGCTTAGCGGTACCGGCGGGACTTGGTGAAAAGGGGCTGAGCTAGAATCTTTGGGATGCAGCGAGCTTTAGGGGAAAAC--AGTGAAGTTAATGACAGAGCTAAGCTGGGGGTTAGCTCTGTACCAGGATTCCTGAGCTCTCGGTCCTCTCCCTGGCCGCAGGCTGGAGCTGCCCCCTGAAGAGGGACCTCCGTACAGACCCGAGTTCTACAGCGGCTGGGAGCCGCCGGCCATTGACCCGCAGGGCCGCCCCTGGGAGGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGCCAGGTGAGGCTGAGGATTCT--------AGGAGAGCAGCAAGCTCCCCCAAACGACCCAGCAGGGCAGAGGCCGGGAA-------------------------------------------------GTCC-----AGGGGCTTGGCTGATCCACCAGGCCTTGCCTCACCCAAC-----TCTTACTTCCTGCAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCGAGGCAA--GGGGTCCAGGAGGGG-TACGCCCCGGGGGCTCCCGGTGCTGACTCTGCCCCCCTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTCTTCTCAGGTGGGTGAGATGGTGAC--GGGCGGGCCGGGGC-GGGAGATGGGGAGGAGCagggaggga-gggggcaggacccagatttctggggccaagggaggagggagtggaggcccgggttcccgggcctaagggagaaaaggggctgggagtGGGTAATGTCTGAGA-GTTGGATCCCTGGATCCCC-AAAGGCTGGAAGAAGGCAGTTTGGTTTCCCTGGGCCTGGGAAGCTCCGTCC----CTGGG-TCCCTGTGAGGACAGAGCCCTGGATATTGAAGGACAGAGGCTGGGGAATTGGACCTTTGGGTTTTGAAGAATAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTAGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGAGCTTGGGGGCAAGTTTCT-GGAAAGTTAGGAAGTGGTGGTATCTCTGGGCCCCTGAGAGAGGTAAAGGCTGGACAGTTACACTCTTGG-----------------------TTGTCTGGGTTTCTGCTGGGTGTCAGACT-----------GGG----ACGCGTTAAGGGTT---AGGATACGG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20155717 2082 - 122678785 CACCCCCTTGCCAGCTCTGACTCCCCATCCCTGGGGACCTCACTGGG------C----CTCTGTCTGTCTGACTGGCGCTGTCTCTGTGTCCCCAACACTGCACCTGCGTCCCTTACCTGCAGAGGGTCTCCTGACCCTGCGGGCCAAGCCGCCCTCAGAGGCCGAGTACACTGACGTGCTTCAGAAAATCAAGTACGCCTTCAGCCTGCTGGTGAGAATGCGTGGGGTGCGGCCAGCGT-GGGGCGGGGGCGTAGCAAGCCTGACCCGTCTTCCATGCACTCAGTAAGGCCAGCACCTCCCCGGCTCCACAGGCCAGACTGCGTGGAAACATCGCCAACCCTTCCTCCCCAGAGCTGCTGCATTTCCTGTTCGGACCTCTGCAATTGGTGAGCCACCCCTCCCTCAGCCCTCCGGTGGCCCCTGCAGTAGGAGGAATTGAGGTTTGACCT-TGGGGGGCTTGATGGGG-----TGTCCACTCCTGCACCCCTGGCAGATTGTGGACACATCGGGCGGCCCCCGATTTGCAAGTGACGTGCAGCGGCCGCACCTGACGTCTGAGGCGGTGGCACTGCTGCGGGACAACCTCACCCCCCGTGAAAATGCCCTCTGGACCTCGCTGGGGGACTCATGGACCCGCCCGGGGTGAGGGG-----CTGGCAGGCAGGGAAGGGTAGCCACTGG----GCTTAG--------------------------------------------CTAGAGGGTACAACCCCAAGCAATTGAAGAA------------------------------------------------------------GCTAGGGTGACTGCTAGGATGCCACTGGAG---AGACGAGTAGACGGTGTGGAGGAGAGGTT-----------------TCAGACTGGAAAGAAAGGCTGGCCTTAGA-----AA-------AGGGGGTGCAGCCTAGGA-------------------------------AAAGACTGG-CTGTGGATTGGGGAAGGGGGTGGAG---ATACGCTTGCAGGCTGCGAGCCTC-CAGGGATATGAGCAGAGCC--AGACTTAGCAGAAGGAGGCAGGATGGGTGTGGAAAAATC--AGAGGTGATTCAGAGGCTGGACACAGCA--------TT--------AGAGCAAAA---------------------------TCAGTATATT------------------------------------------------------------------------------------------------------TACAAATAT-AGTTGATGTCAGGGTGGAACTTAGAG---------GGGCTTGGCAAAAAGCAGAGAGGCCAG----------AAGCACCTAGCCTAGGGG------CTGGGGAAGTGAAGGTGGTACTGGGGCCTGGGG------CAG-ACTGGCATCCCTGAGCCCTCGGCC----CCTCGGCTGCAGACTGGAGCTGTCCCCCAAGGAGGGACCTCCATACAGCCCTGAGTTCTCCAGCGGCTGGGAGCCCCCTGCCACCGACCCACACGGCCGCGCCTGGGAGGACCCGGTAGAGAAACAGCTACAGCATGAGCGGCAACGCCAGCAGGTGAGGCTAGAGCTTCTCTTCCCCGGGAGGAACAAACTCCTCCCCCAGGTAACACAGTGGGGCTGGGACCAGGAA-------------------------------------------------GTCT--------------------------GGCCCTGCCTGAGCTGCTGCTGCTCTCATCTCCTGCAGCAAAGTGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTCGGGGCCCCA-GGTGGGACAGGTGGGGTCGAGGAGGGGATGCGTCCTGGGGGCTCCTGGCGCTGACTCCACTCCTTTTTTC----TGTCTTTCCTTCTGGCTTCCCGGCTCTTCCCAGGTGGGTGAGGTGGTGACCAGTGAGGGCTgggggctgg-gagaggggggaggggggagggg-ggaggggg-------------------aagggggCAG--------GACCCAGACTTGGGGGTCTGAGGGAGGAA-GGGGCTGGGAGTGGGTAAAGTCTGAGA------------------------GGCTGGGAGAAGGCAGTTTGAGTTCCCATGGCCAGGAAAGCTCCCTGT----GTGGG-TCTTTAAGAGGACAGAGCCCCAGAAGTTAGAGGGAAGAGACTGGGGGCTTGGGCATTTAGGTTTTGAGGTAGAGCTCAAAACCACCTAGGTAACTCTAGGTGGTACTTTGGGGACTTACTGAGTTACCACCTAGGTAACTCTAGGTGGTACTTTGGGGACTTACTGAGCCTTCAAGAGCCAAGGGACAAGTTTCTGGGAAAGTTGGGAAGAGATAGTATTTCTGGGACCCTGAAAGAGGTAACGACTGGG-GGCTGGACCCTTACTATCCCA-AGGCTCTAAAGCAAACTATCTCAATTCCTGCTGAGTGTGATACTGATAGCCTTCAGAGATTAAAGGTTTGGGAAATGATGGCTTGAGA i canFam3.chr1 C 0 N 0 a score=30456.000000 s hg38.chr19_GL949747v2_alt 729511 9 + 729520 TTGAAGCTT s panTro4.chr19 59996975 9 + 63644993 TTGAAGCTT i panTro4.chr19 C 0 N 0 s ponAbe2.chr19 56952211 9 + 60714840 TTGAAGCTT i ponAbe2.chr19 C 0 N 0 s nomLeu3.chr10 103420606 9 - 106955855 TTGAAGCTT i nomLeu3.chr10 C 0 N 0 s rheMac3.chr19 60730349 9 + 64156825 TTGAAGCTT i rheMac3.chr19 C 0 N 0 s macFas5.chr19 55888236 9 + 59248254 TTGAAGCTT i macFas5.chr19 C 0 N 0 s papAnu2.chr19 47976746 9 + 51301725 TTGAAGCTT i papAnu2.chr19 C 0 N 0 s chlSab2.chr6 47676174 9 + 50890351 TTGAAGCTT i chlSab2.chr6 C 0 N 0 s calJac3.chr22_GL285922_random 84735 9 + 138250 TTGAAGCTT i calJac3.chr22_GL285922_random C 0 N 0